-- dump date 20120504_160138 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 349101000001 SEQ_END SEQ_END NC_009040.1 122606 122606 DR NC_009040.1; contig end 122606..122606 Rhodobacter sphaeroides ATCC 17029 349101000002 SEQ_END SEQ_END NC_009049.1 3147721 3147721 DR NC_009049.1; contig end 3147721..3147721 Rhodobacter sphaeroides ATCC 17029 349101000003 SEQ_END SEQ_END NC_009050.1 1219053 1219053 DR NC_009050.1; contig end 1219053..1219053 Rhodobacter sphaeroides ATCC 17029 YP_001041782.1 CDS Rsph17029_4068 NC_009040.1 70 4755 R KEGG: mag:amb3790 large exoprotein involved in heme utilization or adhesion; large exoprotein involved in heme utilization or adhesion complement(70..4755) Rhodobacter sphaeroides ATCC 17029 4894980 YP_001041783.1 CDS Rsph17029_4069 NC_009040.1 5009 6781 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: neu:NE2092 glycosyl transferase group 1:TPR repeat; TPR repeat-containing protein 5009..6781 Rhodobacter sphaeroides ATCC 17029 4895024 YP_001041784.1 CDS Rsph17029_4070 NC_009040.1 6898 9072 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01377 probable toxin secretion ABC transporter, ATP-binding protein; ABC transporter related 6898..9072 Rhodobacter sphaeroides ATCC 17029 4895059 YP_001041785.1 CDS Rsph17029_4071 NC_009040.1 9069 10367 D PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH01378 probable protein secretion protein, HlyD family; secretion protein HlyD family protein 9069..10367 Rhodobacter sphaeroides ATCC 17029 4895003 YP_001041786.1 CDS Rsph17029_4072 NC_009040.1 10391 10984 D PFAM: Methyltransferase type 11; KEGG: dar:Daro_0786 TPR repeat:tetratricopeptide TPR_4; methyltransferase type 11 10391..10984 Rhodobacter sphaeroides ATCC 17029 4895020 YP_001041787.1 CDS Rsph17029_4073 NC_009040.1 11118 11954 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(11118..11954) Rhodobacter sphaeroides ATCC 17029 4894991 YP_001041788.1 CDS Rsph17029_4074 NC_009040.1 12156 12881 D KEGG: rsp:RSP_3538 hypothetical protein; hypothetical protein 12156..12881 Rhodobacter sphaeroides ATCC 17029 4895022 YP_001041789.1 CDS Rsph17029_4075 NC_009040.1 13248 14030 D PFAM: sulfotransferase; KEGG: sye:Syncc9902_0128 hypothetical protein; sulfotransferase 13248..14030 Rhodobacter sphaeroides ATCC 17029 4895035 YP_001041790.1 CDS Rsph17029_4076 NC_009040.1 14005 14895 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pde:Pden_2119 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase complement(14005..14895) Rhodobacter sphaeroides ATCC 17029 4894992 YP_001041791.1 CDS Rsph17029_4077 NC_009040.1 14892 15743 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: pde:Pden_2120 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(14892..15743) Rhodobacter sphaeroides ATCC 17029 4894971 YP_001041792.1 CDS Rsph17029_4078 NC_009040.1 15740 16780 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rde:RD1_B0019 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(15740..16780) Rhodobacter sphaeroides ATCC 17029 4894996 YP_001041793.1 CDS Rsph17029_4079 NC_009040.1 16784 17347 R KEGG: sit:TM1040_3863 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(16784..17347) Rhodobacter sphaeroides ATCC 17029 4894972 YP_001041794.1 CDS Rsph17029_4080 NC_009040.1 17411 18349 R PFAM: glycosyl transferase, family 2; KEGG: net:Neut_0166 glycosyl transferase, family 2; glycosyl transferase family protein complement(17411..18349) Rhodobacter sphaeroides ATCC 17029 4894986 YP_001041795.1 CDS Rsph17029_4081 NC_009040.1 18401 19363 R KEGG: jan:Jann_4266 RepA; hypothetical protein complement(18401..19363) Rhodobacter sphaeroides ATCC 17029 4895007 YP_001041796.1 CDS Rsph17029_4082 NC_009040.1 20057 21511 D PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sit:TM1040_3773 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 20057..21511 Rhodobacter sphaeroides ATCC 17029 4895060 YP_001041797.1 CDS Rsph17029_4083 NC_009040.1 21636 22742 D PFAM: ParB domain protein nuclease; KEGG: rde:RD1_B0047 chromosome partitioning protein, putative; nuclease 21636..22742 Rhodobacter sphaeroides ATCC 17029 4895025 YP_001041798.1 CDS Rsph17029_4084 NC_009040.1 23042 23851 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_2127 ABC transporter related; ABC transporter related complement(23042..23851) Rhodobacter sphaeroides ATCC 17029 4894997 YP_001041799.1 CDS Rsph17029_4085 NC_009040.1 23868 25007 R KEGG: pde:Pden_5038 capsule polysaccharide export protein-like; capsule polysaccharide export protein-like complement(23868..25007) Rhodobacter sphaeroides ATCC 17029 4895028 YP_001041800.1 CDS Rsph17029_4086 NC_009040.1 25721 26521 D PFAM: ABC-2 type transporter; KEGG: pde:Pden_5039 ABC-2 type transporter; ABC-2 type transporter 25721..26521 Rhodobacter sphaeroides ATCC 17029 4895030 YP_001041801.1 CDS Rsph17029_4087 NC_009040.1 26585 28840 D KEGG: ccr:CC0633 polysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein-like 26585..28840 Rhodobacter sphaeroides ATCC 17029 4895017 YP_001041802.1 CDS Rsph17029_4088 NC_009040.1 28841 29833 D hypothetical protein 28841..29833 Rhodobacter sphaeroides ATCC 17029 4895029 YP_001041803.1 CDS Rsph17029_4089 NC_009040.1 29991 31349 R KEGG: rsp:RSP_3985 hypothetical protein; hypothetical protein complement(29991..31349) Rhodobacter sphaeroides ATCC 17029 4895000 YP_001041804.1 CDS Rsph17029_4090 NC_009040.1 31952 33253 D KEGG: mes:Meso_2767 hypothetical protein; hypothetical protein 31952..33253 Rhodobacter sphaeroides ATCC 17029 4894990 YP_001041805.1 CDS Rsph17029_4091 NC_009040.1 33435 34376 D PFAM: Hemolysin-type calcium-binding region; KEGG: sil:SPO2401 type I secretion target repeat protein; hemolysin-type calcium-binding region 33435..34376 Rhodobacter sphaeroides ATCC 17029 4894977 YP_001041806.1 CDS Rsph17029_4092 NC_009040.1 34492 35799 D hypothetical protein 34492..35799 Rhodobacter sphaeroides ATCC 17029 4894976 YP_001041807.1 CDS Rsph17029_4093 NC_009040.1 35889 36578 D KEGG: sye:Syncc9902_2034 TPR repeat; hypothetical protein 35889..36578 Rhodobacter sphaeroides ATCC 17029 4895018 YP_001041808.1 CDS Rsph17029_4094 NC_009040.1 36611 37705 R KEGG: pde:Pden_5028 hypothetical protein; hypothetical protein complement(36611..37705) Rhodobacter sphaeroides ATCC 17029 4894943 YP_001041809.1 CDS Rsph17029_4095 NC_009040.1 37733 38737 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: jan:Jann_0077 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(37733..38737) Rhodobacter sphaeroides ATCC 17029 4895012 YP_001041810.1 CDS Rsph17029_4096 NC_009040.1 39021 39416 R hypothetical protein complement(39021..39416) Rhodobacter sphaeroides ATCC 17029 4894962 YP_001041811.1 CDS Rsph17029_4097 NC_009040.1 40664 42058 D produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 40664..42058 Rhodobacter sphaeroides ATCC 17029 4894994 YP_001041812.1 CDS Rsph17029_4098 NC_009040.1 42055 42495 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 42055..42495 Rhodobacter sphaeroides ATCC 17029 4895023 YP_001041813.1 CDS Rsph17029_4099 NC_009040.1 42492 42857 D KEGG: bma:BMAA0124.1 ATP synthase gene 1, putative; ATP synthase gene 1, putative 42492..42857 Rhodobacter sphaeroides ATCC 17029 4895011 YP_001041814.1 CDS Rsph17029_4100 NC_009040.1 43111 43794 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 43111..43794 Rhodobacter sphaeroides ATCC 17029 4895033 YP_001041815.1 CDS Rsph17029_4101 NC_009040.1 43791 44042 D produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 43791..44042 Rhodobacter sphaeroides ATCC 17029 4894984 YP_001041816.1 CDS Rsph17029_4102 NC_009040.1 44048 44752 D PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: bxe:Bxe_C0044 H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase, B/B' subunit 44048..44752 Rhodobacter sphaeroides ATCC 17029 4894973 YP_001041817.1 CDS Rsph17029_4103 NC_009040.1 44742 46235 D KEGG: bxe:Bxe_A1885 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; ATP synthase F1, alpha subunit 44742..46235 Rhodobacter sphaeroides ATCC 17029 4895039 YP_001041818.1 CDS Rsph17029_4104 NC_009040.1 46232 47083 D PFAM: H+-transporting two-sector ATPase, gamma subunit; KEGG: bte:BTH_II0427 ATP synthase F1, gamma subunit; H+-transporting two-sector ATPase, gamma subunit 46232..47083 Rhodobacter sphaeroides ATCC 17029 4895034 YP_001041819.1 CDS Rsph17029_4108 NC_009040.1 48881 49420 D KEGG: pde:Pden_2404 hypothetical protein; hypothetical protein 48881..49420 Rhodobacter sphaeroides ATCC 17029 4894959 YP_001041820.1 CDS Rsph17029_4109 NC_009040.1 50642 50866 D KEGG: sil:SPOA0122 ISSpo9, transposase; ISSpo9, transposase 50642..50866 Rhodobacter sphaeroides ATCC 17029 4895056 YP_001041821.1 CDS Rsph17029_4110 NC_009040.1 51036 51551 D hypothetical protein 51036..51551 Rhodobacter sphaeroides ATCC 17029 4894958 YP_001041822.1 CDS Rsph17029_4111 NC_009040.1 51665 56728 D TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: hch:HCH_02073 rhs family protein; YD repeat-containing protein 51665..56728 Rhodobacter sphaeroides ATCC 17029 4894949 YP_001041823.1 CDS Rsph17029_4113 NC_009040.1 57529 58053 D hypothetical protein 57529..58053 Rhodobacter sphaeroides ATCC 17029 4895036 YP_001041824.1 CDS Rsph17029_4114 NC_009040.1 58040 58450 R KEGG: bur:Bcep18194_B2403 hypothetical protein; hypothetical protein complement(58040..58450) Rhodobacter sphaeroides ATCC 17029 4894983 YP_001041825.1 CDS Rsph17029_4115 NC_009040.1 58480 58878 R hypothetical protein complement(58480..58878) Rhodobacter sphaeroides ATCC 17029 4894948 YP_001041826.1 CDS Rsph17029_4116 NC_009040.1 59035 59835 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: bch:Bcen2424_3705 transcriptional regulator, AraC family; AraC family transcriptional regulator 59035..59835 Rhodobacter sphaeroides ATCC 17029 4894960 YP_001041827.1 CDS Rsph17029_4117 NC_009040.1 59960 60382 R PFAM: regulatory protein, MerR; KEGG: sil:SPOA0389 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(59960..60382) Rhodobacter sphaeroides ATCC 17029 4894944 YP_001041828.1 CDS Rsph17029_4118 NC_009040.1 60580 61557 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: hne:HNE_0549 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 60580..61557 Rhodobacter sphaeroides ATCC 17029 4895016 YP_001041829.1 CDS Rsph17029_4119 NC_009040.1 61892 62389 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pde:Pden_1629 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 61892..62389 Rhodobacter sphaeroides ATCC 17029 4894970 YP_001041830.1 CDS Rsph17029_4120 NC_009040.1 62386 63360 D PFAM: FecR protein; KEGG: pen:PSEEN4566 FecR-like transmembrane sensor; putative FecR 62386..63360 Rhodobacter sphaeroides ATCC 17029 4895002 YP_001041831.1 CDS Rsph17029_4121 NC_009040.1 63491 65866 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: neu:NE1097 TonB-dependent receptor protein; TonB-dependent siderophore receptor 63491..65866 Rhodobacter sphaeroides ATCC 17029 4894950 YP_001041832.1 CDS Rsph17029_4122 NC_009040.1 65909 66772 D PFAM: periplasmic binding protein; KEGG: aha:AHA_4278 ferrichrome-binding periplasmic protein; periplasmic binding protein 65909..66772 Rhodobacter sphaeroides ATCC 17029 4895051 YP_001041833.1 CDS Rsph17029_4123 NC_009040.1 66776 68713 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 66776..68713 Rhodobacter sphaeroides ATCC 17029 4895013 YP_001041834.1 CDS Rsph17029_4124 NC_009040.1 68710 69585 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecj:JW0147 iron-hydroxamate transporter subunit; ABC transporter related 68710..69585 Rhodobacter sphaeroides ATCC 17029 4895006 YP_001041835.1 CDS Rsph17029_4126 NC_009040.1 70091 70480 D TIGRFAM: uncharacterized domain 1; KEGG: pde:Pden_1441 hypothetical protein; hypothetical protein 70091..70480 Rhodobacter sphaeroides ATCC 17029 4895038 YP_001041836.1 CDS Rsph17029_4130 NC_009040.1 71982 72722 R PFAM: protein of unknown function DUF81; KEGG: pde:Pden_1465 hypothetical protein; hypothetical protein complement(71982..72722) Rhodobacter sphaeroides ATCC 17029 4895040 YP_001041837.1 CDS Rsph17029_4132 NC_009040.1 73061 73582 R hypothetical protein complement(73061..73582) Rhodobacter sphaeroides ATCC 17029 4895041 YP_001041838.1 CDS Rsph17029_4133 NC_009040.1 73579 74211 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pde:Pden_1467 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(73579..74211) Rhodobacter sphaeroides ATCC 17029 4894978 YP_001041839.1 CDS Rsph17029_4134 NC_009040.1 74214 74759 R PFAM: protein of unknown function DUF1234; KEGG: pde:Pden_1468 protein of unknown function DUF1234; hypothetical protein complement(74214..74759) Rhodobacter sphaeroides ATCC 17029 4894995 YP_001041840.1 CDS Rsph17029_4135 NC_009040.1 74874 75053 D KEGG: pde:Pden_1469 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 74874..75053 Rhodobacter sphaeroides ATCC 17029 4894947 YP_001041841.1 CDS Rsph17029_4136 NC_009040.1 75056 75844 R PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1566 alpha/beta hydrolase fold; alpha/beta hydrolase fold complement(75056..75844) Rhodobacter sphaeroides ATCC 17029 4895005 YP_001041842.1 CDS Rsph17029_4137 NC_009040.1 75929 76345 D PFAM: regulatory protein, MerR; KEGG: rpa:RPA4825 transcriptional regulator, MerR family; MerR family transcriptional regulator 75929..76345 Rhodobacter sphaeroides ATCC 17029 4895047 YP_001041843.1 CDS Rsph17029_4138 NC_009040.1 76342 76836 R KEGG: rsp:RSP_4150 hypothetical protein; hypothetical protein complement(76342..76836) Rhodobacter sphaeroides ATCC 17029 4894946 YP_001041844.1 CDS Rsph17029_4140 NC_009040.1 77169 78086 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pfo:Pfl_1318 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(77169..78086) Rhodobacter sphaeroides ATCC 17029 4895042 YP_001041845.1 CDS Rsph17029_4141 NC_009040.1 78171 78641 D PFAM: protein of unknown function DUF606; KEGG: bur:Bcep18194_B1974 protein of unknown function DUF606; hypothetical protein 78171..78641 Rhodobacter sphaeroides ATCC 17029 4895021 YP_001041846.1 CDS Rsph17029_4142 NC_009040.1 78760 79605 R PFAM: UspA domain protein; KEGG: mes:Meso_0781 UspA; UspA domain-containing protein complement(78760..79605) Rhodobacter sphaeroides ATCC 17029 4894982 YP_001041847.1 CDS Rsph17029_4143 NC_009040.1 79619 81109 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rsp:RSP_4197 antisigma-factor antagonist, STAS; sulphate transporter complement(79619..81109) Rhodobacter sphaeroides ATCC 17029 4894956 YP_001041848.1 CDS Rsph17029_4144 NC_009040.1 81449 82384 R PFAM: MscS Mechanosensitive ion channel; KEGG: eba:ebA6709 putative mechanosensitive channel protein; MscS mechanosensitive ion channel complement(81449..82384) Rhodobacter sphaeroides ATCC 17029 4895015 YP_001041849.1 CDS Rsph17029_4145 NC_009040.1 82600 83013 R Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator complement(82600..83013) Rhodobacter sphaeroides ATCC 17029 4895008 YP_001041850.1 CDS Rsph17029_4146 NC_009040.1 84029 84760 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV6021 GntR-family transcriptional regulator; GntR family transcriptional regulator complement(84029..84760) Rhodobacter sphaeroides ATCC 17029 4895014 YP_001041851.1 CDS Rsph17029_4147 NC_009040.1 84900 86456 D PFAM: extracellular solute-binding protein, family 5; KEGG: rfr:Rfer_0985 extracellular solute-binding protein, family 5; extracellular solute-binding protein 84900..86456 Rhodobacter sphaeroides ATCC 17029 4894952 YP_001041852.1 CDS Rsph17029_4148 NC_009040.1 86537 87490 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0984 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 86537..87490 Rhodobacter sphaeroides ATCC 17029 4894979 YP_001041853.1 CDS Rsph17029_4149 NC_009040.1 87480 88385 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0983 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 87480..88385 Rhodobacter sphaeroides ATCC 17029 4894957 YP_001041854.1 CDS Rsph17029_4150 NC_009040.1 88397 89107 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PE00431 probable oxidoreductase protein, short-chain-dehydrogenase (SDR) superfamily; short-chain dehydrogenase/reductase SDR 88397..89107 Rhodobacter sphaeroides ATCC 17029 4894975 YP_001041855.1 CDS Rsph17029_4152 NC_009040.1 89633 90379 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sil:SPO2413 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR complement(89633..90379) Rhodobacter sphaeroides ATCC 17029 4895043 YP_001041856.1 CDS Rsph17029_4153 NC_009040.1 90401 91582 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_1946 mandelate racemase/muconate lactonizing enzyme-like; mandelate racemase/muconate lactonizing protein complement(90401..91582) Rhodobacter sphaeroides ATCC 17029 4894951 YP_001041857.1 CDS Rsph17029_4154 NC_009040.1 91688 92728 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sme:SMb20435 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 91688..92728 Rhodobacter sphaeroides ATCC 17029 4895044 YP_001041858.1 CDS Rsph17029_4155 NC_009040.1 92746 94242 D PFAM: Uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: bch:Bcen2424_6086 MlrC domain protein; MlrC domain-containing protein 92746..94242 Rhodobacter sphaeroides ATCC 17029 4895037 YP_001041859.1 CDS Rsph17029_4156 NC_009040.1 94244 95419 D PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bbr:BB4687 putative mandelate racemase; mandelate racemase/muconate lactonizing protein 94244..95419 Rhodobacter sphaeroides ATCC 17029 4895027 YP_001041860.1 CDS Rsph17029_4157 NC_009040.1 95469 96485 D KEGG: jan:Jann_4131 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 95469..96485 Rhodobacter sphaeroides ATCC 17029 4895026 YP_001041861.1 CDS Rsph17029_4158 NC_009040.1 96485 97513 D KEGG: rme:Rmet_5092 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter, ATPase subunit 96485..97513 Rhodobacter sphaeroides ATCC 17029 4895049 YP_001041862.1 CDS Rsph17029_4159 NC_009040.1 97796 98584 R PFAM: protein of unknown function DUF1217; KEGG: sil:SPO3456 flagellar protein, putative; hypothetical protein complement(97796..98584) Rhodobacter sphaeroides ATCC 17029 4894965 YP_001041863.1 CDS flbT NC_009040.1 98581 98988 R post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT complement(98581..98988) Rhodobacter sphaeroides ATCC 17029 4894968 YP_001041864.1 CDS flaF NC_009040.1 98985 99350 R acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF complement(98985..99350) Rhodobacter sphaeroides ATCC 17029 4894967 YP_001041865.1 CDS Rsph17029_4162 NC_009040.1 99440 100285 R PFAM: flagellin domain protein; KEGG: pde:Pden_1620 flagellin domain protein; flagellin domain-containing protein complement(99440..100285) Rhodobacter sphaeroides ATCC 17029 4895010 YP_001041866.1 CDS Rsph17029_4163 NC_009040.1 100694 101554 D hypothetical protein 100694..101554 Rhodobacter sphaeroides ATCC 17029 4894969 YP_001041867.1 CDS Rsph17029_4164 NC_009040.1 101594 102343 R PFAM: protein of unknown function DUF81; KEGG: ade:Adeh_2178 protein of unknown function DUF81; hypothetical protein complement(101594..102343) Rhodobacter sphaeroides ATCC 17029 4894954 YP_001041868.1 CDS Rsph17029_4165 NC_009040.1 102540 103238 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sit:TM1040_0365 GntR-like; GntR domain-containing protein 102540..103238 Rhodobacter sphaeroides ATCC 17029 4894985 YP_001041869.1 CDS Rsph17029_4166 NC_009040.1 103346 104134 D TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: mag:amb2949 molybdenum-pterin binding protein MopA; ModE family transcriptional regulator 103346..104134 Rhodobacter sphaeroides ATCC 17029 4894999 YP_001041870.1 CDS Rsph17029_4167 NC_009040.1 104175 105008 D KEGG: rpa:RPA1002 putative molybdenum transport system protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; modD protein 104175..105008 Rhodobacter sphaeroides ATCC 17029 4894981 YP_001041871.1 CDS Rsph17029_4168 NC_009040.1 105348 105551 D PFAM: TOBE domain protein; KEGG: pde:Pden_1172 TOBE domain protein; TOBE domain-containing protein 105348..105551 Rhodobacter sphaeroides ATCC 17029 4895001 YP_001041872.1 CDS Rsph17029_4169 NC_009040.1 106096 106872 D TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: sme:SMc03196 putative molybdate-binding periplasmic ABC transporter protein; molybdenum ABC transporter, periplasmic molybdate-binding protein 106096..106872 Rhodobacter sphaeroides ATCC 17029 4894998 YP_001041873.1 CDS modB NC_009040.1 106872 107570 D part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease protein 106872..107570 Rhodobacter sphaeroides ATCC 17029 4894989 YP_001041874.1 CDS Rsph17029_4171 NC_009040.1 107567 108673 D KEGG: sil:SPO0697 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter, ATPase subunit 107567..108673 Rhodobacter sphaeroides ATCC 17029 4894966 YP_001041875.1 CDS Rsph17029_4172 NC_009040.1 108786 109373 D PFAM: Exopolysaccharide synthesis, ExoD; KEGG: hch:HCH_02767 probable exopolysaccharide synthesis protein; exopolysaccharide synthesis, ExoD 108786..109373 Rhodobacter sphaeroides ATCC 17029 4895053 YP_001041876.1 CDS Rsph17029_4173 NC_009040.1 109538 109999 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pde:Pden_4422 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(109538..109999) Rhodobacter sphaeroides ATCC 17029 4894961 YP_001041877.1 CDS Rsph17029_4174 NC_009040.1 110301 110711 D hypothetical protein 110301..110711 Rhodobacter sphaeroides ATCC 17029 4895009 YP_001041878.1 CDS Rsph17029_4175 NC_009040.1 111197 111706 D TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pde:Pden_2812 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 111197..111706 Rhodobacter sphaeroides ATCC 17029 4894955 YP_001041879.1 CDS Rsph17029_4176 NC_009040.1 111844 112470 R PFAM: Negative transcriptional regulator; KEGG: mlo:mlr6176 transcriptional regulator; FMN-binding negative transcriptional regulator complement(111844..112470) Rhodobacter sphaeroides ATCC 17029 4894987 YP_001041880.1 CDS Rsph17029_4177 NC_009040.1 112492 113118 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rme:Rmet_3862 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA complement(112492..113118) Rhodobacter sphaeroides ATCC 17029 4895048 YP_001041881.1 CDS Rsph17029_4178 NC_009040.1 113191 114090 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 113191..114090 Rhodobacter sphaeroides ATCC 17029 4894945 YP_001041882.1 CDS Rsph17029_4179 NC_009040.1 114519 115523 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: pde:Pden_4344 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein 114519..115523 Rhodobacter sphaeroides ATCC 17029 4895050 YP_001041883.1 CDS Rsph17029_4180 NC_009040.1 115525 116358 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4343 sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 115525..116358 Rhodobacter sphaeroides ATCC 17029 4895046 YP_001041884.1 CDS Rsph17029_4181 NC_009040.1 116362 117237 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_4342 sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 116362..117237 Rhodobacter sphaeroides ATCC 17029 4894953 YP_001041885.1 CDS Rsph17029_4182 NC_009040.1 117249 117968 D KEGG: pde:Pden_4341 sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter, ATPase subunit 117249..117968 Rhodobacter sphaeroides ATCC 17029 4895052 YP_001041886.1 CDS Rsph17029_4183 NC_009040.1 117965 118552 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: pde:Pden_5122 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 117965..118552 Rhodobacter sphaeroides ATCC 17029 4895054 YP_001041887.1 CDS Rsph17029_4184 NC_009040.1 118559 119197 R PFAM: protein of unknown function UPF0126; KEGG: rpb:RPB_1303 protein of unknown function UPF0126; hypothetical protein complement(118559..119197) Rhodobacter sphaeroides ATCC 17029 4895045 YP_001041888.1 CDS Rsph17029_4185 NC_009040.1 119508 122597 D PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; KEGG: ana:all0364 similar to prohormone convertase; Na-Ca exchanger/integrin-beta4 119508..122597 Rhodobacter sphaeroides ATCC 17029 4894964 YP_001041893.1 CDS Rsph17029_0001 NC_009049.1 36 1346 D KEGG: rsp:RSP_1332 H+-transporting two-sector ATPase, alpha/beta subunit; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; FliI/YscN family ATPase 36..1346 Rhodobacter sphaeroides ATCC 17029 4897090 YP_001041894.1 CDS Rsph17029_0002 NC_009049.1 1350 1673 R KEGG: rsp:RSP_1333 hypothetical protein; hypothetical protein complement(1350..1673) Rhodobacter sphaeroides ATCC 17029 4895900 YP_001041895.1 CDS Rsph17029_0003 NC_009049.1 1663 1941 R KEGG: rsp:RSP_1334 possible chemotactic signal-response protein CheL; putative chemotactic signal-response protein CheL complement(1663..1941) Rhodobacter sphaeroides ATCC 17029 4895550 YP_001041896.1 CDS Rsph17029_0004 NC_009049.1 2045 4264 D KEGG: rsp:RSP_1335 hypothetical protein; hypothetical protein 2045..4264 Rhodobacter sphaeroides ATCC 17029 4897817 YP_001041897.1 CDS flgD NC_009049.1 4274 4942 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of many flagellar genes; the Rhodobacter protein in this cluster is associated with a set of flagellar genes acquired by lateral gene transfer; these genes are not normally expressed; flagellar basal body rod modification protein 4274..4942 Rhodobacter sphaeroides ATCC 17029 4896929 YP_001041898.1 CDS Rsph17029_0006 NC_009049.1 4937 6466 R TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: rsp:RSP_1337 probable ubiquinone biosynthesis protein; 2-polyprenylphenol 6-hydroxylase complement(4937..6466) Rhodobacter sphaeroides ATCC 17029 4896595 YP_001041899.1 CDS Rsph17029_0007 NC_009049.1 6468 7220 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_1338 methyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase LpxD complement(6468..7220) Rhodobacter sphaeroides ATCC 17029 4896098 YP_001041900.1 CDS Rsph17029_0008 NC_009049.1 7314 8165 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 7314..8165 Rhodobacter sphaeroides ATCC 17029 4896879 YP_001041901.1 CDS Rsph17029_0009 NC_009049.1 8226 9002 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_1340 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 8226..9002 Rhodobacter sphaeroides ATCC 17029 4897673 YP_001041902.1 CDS rpsT NC_009049.1 9113 9391 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 9113..9391 Rhodobacter sphaeroides ATCC 17029 4895437 YP_001041903.1 CDS dnaA NC_009049.1 9930 11297 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 9930..11297 Rhodobacter sphaeroides ATCC 17029 4895599 YP_001041904.1 CDS Rsph17029_0012 NC_009049.1 11415 12533 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 11415..12533 Rhodobacter sphaeroides ATCC 17029 4896445 YP_001041905.1 CDS recF NC_009049.1 12601 13692 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 12601..13692 Rhodobacter sphaeroides ATCC 17029 4895478 YP_001041906.1 CDS Rsph17029_0014 NC_009049.1 13689 14111 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1345 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 13689..14111 Rhodobacter sphaeroides ATCC 17029 4896499 YP_001041907.1 CDS gyrB NC_009049.1 14203 16638 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 14203..16638 Rhodobacter sphaeroides ATCC 17029 4898002 YP_001041908.1 CDS Rsph17029_0016 NC_009049.1 16595 17884 R KEGG: rsp:RSP_1348 hypothetical protein; hypothetical protein complement(16595..17884) Rhodobacter sphaeroides ATCC 17029 4897044 YP_001041909.1 CDS Rsph17029_0017 NC_009049.1 17974 19050 D PFAM: AFG1-family ATPase; KEGG: rsp:RSP_1349 hypothetical protein; AFG1 family ATPase 17974..19050 Rhodobacter sphaeroides ATCC 17029 4896319 YP_001041910.1 CDS Rsph17029_0018 NC_009049.1 19254 20129 R KEGG: rsp:RSP_1350 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB complement(19254..20129) Rhodobacter sphaeroides ATCC 17029 4895378 YP_001041911.1 CDS Rsph17029_0019 NC_009049.1 20269 21426 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 20269..21426 Rhodobacter sphaeroides ATCC 17029 4896956 YP_001041912.1 CDS Rsph17029_0020 NC_009049.1 21507 23102 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 21507..23102 Rhodobacter sphaeroides ATCC 17029 4897010 YP_001041913.1 CDS Rsph17029_0021 NC_009049.1 23199 23930 D PFAM: metallophosphoesterase; KEGG: rsp:RSP_1353 putative protein phosphatase; metallophosphoesterase 23199..23930 Rhodobacter sphaeroides ATCC 17029 4896215 YP_001041914.1 CDS Rsph17029_0022 NC_009049.1 23980 25182 D catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 23980..25182 Rhodobacter sphaeroides ATCC 17029 4896836 YP_001041915.1 CDS Rsph17029_0023 NC_009049.1 25192 27216 R KEGG: rsp:RSP_1355 glycosyl transferase, family 51; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C complement(25192..27216) Rhodobacter sphaeroides ATCC 17029 4898084 YP_001041916.1 CDS Rsph17029_0024 NC_009049.1 27213 32639 R PFAM: alpha-2-macroglobulin domain protein; N/apple PAN domain protein; alpha-2-macroglobulin domain protein 2; SMART: Apple; KEGG: rsp:RSP_1356 hypothetical protein; alpha-2-macroglobulin domain-containing protein complement(27213..32639) Rhodobacter sphaeroides ATCC 17029 4897787 YP_001041917.1 CDS Rsph17029_0025 NC_009049.1 32793 35342 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1357 cytoplasmic sensor hybrid histidine kinase; histidine kinase 32793..35342 Rhodobacter sphaeroides ATCC 17029 4896619 YP_001041918.1 CDS Rsph17029_0026 NC_009049.1 35496 36269 R PFAM: protein of unknown function DUF328; KEGG: rsp:RSP_1358 hypothetical protein; hypothetical protein complement(35496..36269) Rhodobacter sphaeroides ATCC 17029 4895661 YP_001041919.1 CDS Rsph17029_0027 NC_009049.1 36269 38314 R KEGG: rsp:RSP_1359 DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ complement(36269..38314) Rhodobacter sphaeroides ATCC 17029 4896069 YP_001041920.1 CDS Rsph17029_0028 NC_009049.1 38372 38662 R PFAM: protein of unknown function YGGT; KEGG: rsp:RSP_1360 hypothetical protein; hypothetical protein complement(38372..38662) Rhodobacter sphaeroides ATCC 17029 4897674 YP_001041921.1 CDS Rsph17029_0029 NC_009049.1 38791 39318 D KEGG: rsp:RSP_1361 hypothetical protein; hypothetical protein 38791..39318 Rhodobacter sphaeroides ATCC 17029 4896541 YP_001041922.1 CDS Rsph17029_0030 NC_009049.1 39413 40783 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1362 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 39413..40783 Rhodobacter sphaeroides ATCC 17029 4897633 YP_001041923.1 CDS mepA NC_009049.1 40780 41664 D D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 40780..41664 Rhodobacter sphaeroides ATCC 17029 4897285 YP_001041924.1 CDS Rsph17029_0032 NC_009049.1 41637 42527 D KEGG: rsp:RSP_1364 hypothetical protein; hypothetical protein 41637..42527 Rhodobacter sphaeroides ATCC 17029 4896419 YP_001041925.1 CDS Rsph17029_0033 NC_009049.1 42609 43235 D TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: rsp:RSP_1365 hypothetical protein; hypothetical protein 42609..43235 Rhodobacter sphaeroides ATCC 17029 4896876 YP_001041926.1 CDS Rsph17029_0034 NC_009049.1 43515 43940 D PFAM: Class I peptide chain release factor; KEGG: rsp:RSP_1366 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 43515..43940 Rhodobacter sphaeroides ATCC 17029 4897318 YP_001041927.1 CDS Rsph17029_0035 NC_009049.1 43949 45241 R catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(43949..45241) Rhodobacter sphaeroides ATCC 17029 4897431 YP_001041928.1 CDS Rsph17029_0036 NC_009049.1 45243 45848 R PFAM: isochorismatase hydrolase; KEGG: rsp:RSP_1368 probable pyrazinamidase/nicotinamidase; nicotinamidase complement(45243..45848) Rhodobacter sphaeroides ATCC 17029 4896065 YP_001041929.1 CDS Rsph17029_0037 NC_009049.1 46041 46823 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1369 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 46041..46823 Rhodobacter sphaeroides ATCC 17029 4897521 YP_001041930.1 CDS Rsph17029_0038 NC_009049.1 46820 47743 D PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: rsp:RSP_1371 putative 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase 46820..47743 Rhodobacter sphaeroides ATCC 17029 4896554 YP_001041931.1 CDS Rsph17029_0039 NC_009049.1 47701 49311 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_1370 alpha amylase, catalytic subdomain; alpha amylase complement(47701..49311) Rhodobacter sphaeroides ATCC 17029 4895905 YP_001041932.1 CDS Rsph17029_0040 NC_009049.1 49785 51023 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1372 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 49785..51023 Rhodobacter sphaeroides ATCC 17029 4895081 YP_001041933.1 CDS Rsph17029_0041 NC_009049.1 51116 52288 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1373 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 51116..52288 Rhodobacter sphaeroides ATCC 17029 4895422 YP_001041934.1 CDS Rsph17029_0042 NC_009049.1 52337 53371 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1374 putative lipopolysaccharide core biosynthesis mannosyltransferase protein; group 1 glycosyl transferase 52337..53371 Rhodobacter sphaeroides ATCC 17029 4895792 YP_001041935.1 CDS Rsph17029_0043 NC_009049.1 53368 53994 D KEGG: rsp:RSP_1375 hypothetical protein; hypothetical protein 53368..53994 Rhodobacter sphaeroides ATCC 17029 4896106 YP_001041936.1 CDS Rsph17029_0044 NC_009049.1 54123 55145 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 54123..55145 Rhodobacter sphaeroides ATCC 17029 4896081 YP_001041937.1 CDS Rsph17029_0045 NC_009049.1 55230 55874 R PFAM: carbonic anhydrase; KEGG: rsp:RSP_1377 carbonic anhydrase; carbonate dehydratase complement(55230..55874) Rhodobacter sphaeroides ATCC 17029 4896442 YP_001041938.1 CDS Rsph17029_0046 NC_009049.1 56013 56396 D KEGG: rsp:RSP_1378 hypothetical protein; hypothetical protein 56013..56396 Rhodobacter sphaeroides ATCC 17029 4895817 YP_001041939.1 CDS Rsph17029_0047 NC_009049.1 56467 57852 D PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: rsp:RSP_1379 cytosol aminopeptidase; leucyl aminopeptidase 56467..57852 Rhodobacter sphaeroides ATCC 17029 4896612 YP_001041940.1 CDS Rsph17029_0048 NC_009049.1 57852 58664 D PFAM: NLP/P60 protein; KEGG: rsp:RSP_1380 hypothetical protein; NLP/P60 protein 57852..58664 Rhodobacter sphaeroides ATCC 17029 4896750 YP_001041941.1 CDS Rsph17029_0049 NC_009049.1 58771 59991 R PFAM: protein of unknown function DUF1006; KEGG: rsp:RSP_1381 hypothetical protein; hypothetical protein complement(58771..59991) Rhodobacter sphaeroides ATCC 17029 4896923 YP_001041942.1 CDS Rsph17029_0050 NC_009049.1 60006 61184 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rsp:RSP_1382 radical SAM superfamily protein; radical SAM protein complement(60006..61184) Rhodobacter sphaeroides ATCC 17029 4896930 YP_001041943.1 CDS Rsph17029_0051 NC_009049.1 61323 61853 R KEGG: rsp:RSP_1383 hypothetical protein; hypothetical protein complement(61323..61853) Rhodobacter sphaeroides ATCC 17029 4896906 YP_001041944.1 CDS Rsph17029_0052 NC_009049.1 62020 63009 D PFAM: L-asparaginase II; KEGG: rsp:RSP_1384 hypothetical protein; L-asparaginase II 62020..63009 Rhodobacter sphaeroides ATCC 17029 4896894 YP_001041945.1 CDS Rsph17029_0053 NC_009049.1 63025 63864 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rsp:RSP_1385 hypothetical protein; NAD-dependent epimerase/dehydratase complement(63025..63864) Rhodobacter sphaeroides ATCC 17029 4897080 YP_001041946.1 CDS Rsph17029_0054 NC_009049.1 63999 65477 D Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 63999..65477 Rhodobacter sphaeroides ATCC 17029 4897100 YP_001041947.1 CDS Rsph17029_0055 NC_009049.1 65606 65893 D PFAM: histone family protein DNA-binding protein; KEGG: rsp:RSP_1388 DNA-binding protein HU, form N; histone family protein DNA-binding protein 65606..65893 Rhodobacter sphaeroides ATCC 17029 4897175 YP_001041948.1 CDS Rsph17029_0056 NC_009049.1 65963 66844 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1390 putative transporter, DMT superfamily; hypothetical protein 65963..66844 Rhodobacter sphaeroides ATCC 17029 4897733 YP_001041949.1 CDS Rsph17029_0057 NC_009049.1 66841 67941 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(66841..67941) Rhodobacter sphaeroides ATCC 17029 4897234 YP_001041950.1 CDS tbpA NC_009049.1 68188 69171 D part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 68188..69171 Rhodobacter sphaeroides ATCC 17029 4898027 YP_001041951.1 CDS thiP NC_009049.1 69147 70661 D permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 69147..70661 Rhodobacter sphaeroides ATCC 17029 4897398 YP_001041952.1 CDS Rsph17029_0060 NC_009049.1 70648 71343 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1393 ABC thiamine transporter, ATPase subunit; ABC transporter 70648..71343 Rhodobacter sphaeroides ATCC 17029 4897481 YP_001041953.1 CDS Rsph17029_0061 NC_009049.1 71393 72250 R PFAM: cytochrome c1; KEGG: rsp:RSP_1394 cytochrome c1 precursor; cytochrome c1 complement(71393..72250) Rhodobacter sphaeroides ATCC 17029 4897547 YP_001041954.1 CDS Rsph17029_0062 NC_009049.1 72268 73605 R PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: rsp:RSP_1395 cytochrome b; cytochrome b/b6 domain-containing protein complement(72268..73605) Rhodobacter sphaeroides ATCC 17029 4897640 YP_001041955.1 CDS Rsph17029_0063 NC_009049.1 73616 74179 R KEGG: rsp:RSP_1396 ubiquinol-cytochrome c reductase, iron-sulfur protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit complement(73616..74179) Rhodobacter sphaeroides ATCC 17029 4897603 YP_001041956.1 CDS Rsph17029_0064 NC_009049.1 74685 75293 R KEGG: rsp:RSP_1397 glutathione S-transferase; glutathione S-transferase complement(74685..75293) Rhodobacter sphaeroides ATCC 17029 4895546 YP_001041957.1 CDS Rsph17029_0065 NC_009049.1 75298 75591 R KEGG: rsp:RSP_6156 hypothetical protein; hypothetical protein complement(75298..75591) Rhodobacter sphaeroides ATCC 17029 4895445 YP_001041958.1 CDS rpmJ NC_009049.1 75722 75847 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(75722..75847) Rhodobacter sphaeroides ATCC 17029 4895190 YP_001041959.1 CDS Rsph17029_0067 NC_009049.1 76144 77004 D PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_1399 hypothetical protein; N-formylglutamate amidohydrolase 76144..77004 Rhodobacter sphaeroides ATCC 17029 4895658 YP_001041960.1 CDS Rsph17029_0068 NC_009049.1 77008 78261 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(77008..78261) Rhodobacter sphaeroides ATCC 17029 4895572 YP_001041961.1 CDS Rsph17029_0069 NC_009049.1 78388 79269 D PFAM: band 7 protein; KEGG: rsp:RSP_1401 band 7 protein; hypothetical protein 78388..79269 Rhodobacter sphaeroides ATCC 17029 4895350 YP_001041962.1 CDS Rsph17029_0070 NC_009049.1 79266 79535 D KEGG: rsp:RSP_6157 conserved hypoothetical protein; hypothetical protein 79266..79535 Rhodobacter sphaeroides ATCC 17029 4895567 YP_001041963.1 CDS Rsph17029_0071 NC_009049.1 79844 80179 D KEGG: rsp:RSP_1403 conserved hypoothetical protein; hypothetical protein 79844..80179 Rhodobacter sphaeroides ATCC 17029 4895388 YP_001041964.1 CDS Rsph17029_0072 NC_009049.1 80184 80882 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(80184..80882) Rhodobacter sphaeroides ATCC 17029 4895449 YP_001041965.1 CDS Rsph17029_0073 NC_009049.1 80986 81873 D PFAM: ROK family protein; KEGG: rsp:RSP_1405 ROK family protein; ROK family protein 80986..81873 Rhodobacter sphaeroides ATCC 17029 4896852 YP_001041966.1 CDS Rsph17029_0074 NC_009049.1 81887 82120 R KEGG: rsp:RSP_1406 hypothetical protein; hypothetical protein complement(81887..82120) Rhodobacter sphaeroides ATCC 17029 4896783 YP_001041967.1 CDS Rsph17029_0075 NC_009049.1 82423 85035 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1408 chaperone ClpB; ATPase 82423..85035 Rhodobacter sphaeroides ATCC 17029 4896635 YP_001041968.1 CDS Rsph17029_0076 NC_009049.1 85096 85566 R PFAM: beta-Ig-H3/fasciclin; KEGG: rsp:RSP_1409 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(85096..85566) Rhodobacter sphaeroides ATCC 17029 4896937 YP_001041969.1 CDS Rsph17029_0077 NC_009049.1 85763 86668 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 85763..86668 Rhodobacter sphaeroides ATCC 17029 4895779 YP_001041970.1 CDS Rsph17029_0078 NC_009049.1 86669 87274 D in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 86669..87274 Rhodobacter sphaeroides ATCC 17029 4896057 YP_001041971.1 CDS Rsph17029_0079 NC_009049.1 87359 87685 R KEGG: rsp:RSP_3837 hypothetical protein; hypothetical protein complement(87359..87685) Rhodobacter sphaeroides ATCC 17029 4896004 YP_001041973.1 CDS Rsph17029_0081 NC_009049.1 93400 94098 R KEGG: rsp:RSP_1433 hypothetical protein; hypothetical protein complement(93400..94098) Rhodobacter sphaeroides ATCC 17029 4895427 YP_001041974.1 CDS Rsph17029_0082 NC_009049.1 94118 95098 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1434 putative Zn-dependent oxidoreductase; alcohol dehydrogenase complement(94118..95098) Rhodobacter sphaeroides ATCC 17029 4896092 YP_001041975.1 CDS Rsph17029_0083 NC_009049.1 95114 95773 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_1435 regulatory protein TetR family; TetR family transcriptional regulator complement(95114..95773) Rhodobacter sphaeroides ATCC 17029 4896250 YP_001041976.1 CDS Rsph17029_0084 NC_009049.1 96282 96911 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1436 ABC transporter, duplicated ATPase domains; ABC transporter 96282..96911 Rhodobacter sphaeroides ATCC 17029 4895759 YP_001041977.1 CDS Rsph17029_0085 NC_009049.1 96933 97337 R hypothetical protein complement(96933..97337) Rhodobacter sphaeroides ATCC 17029 4895613 YP_001041978.1 CDS Rsph17029_0086 NC_009049.1 97368 98135 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1437 ABC Fe+3 hydroxamate (ferrichrome) transporter, ATPase subunit; ABC transporter complement(97368..98135) Rhodobacter sphaeroides ATCC 17029 4895462 YP_001041979.1 CDS Rsph17029_0087 NC_009049.1 98132 100108 R part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit complement(98132..100108) Rhodobacter sphaeroides ATCC 17029 4895346 YP_001041980.1 CDS Rsph17029_0088 NC_009049.1 100105 101004 R PFAM: periplasmic binding protein; KEGG: rsp:RSP_1439 ABC Fe+3 hydroxamate (ferrichrome) transporter, periplasmic siderophore binding protein; periplasmic binding protein complement(100105..101004) Rhodobacter sphaeroides ATCC 17029 4896279 YP_001041981.1 CDS Rsph17029_0089 NC_009049.1 100998 103097 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_1440 TonB dependent, hydroxamate-type ferrisiderophore, outer membrane receptor; TonB-dependent siderophore receptor complement(100998..103097) Rhodobacter sphaeroides ATCC 17029 4895258 YP_001041982.1 CDS Rsph17029_0090 NC_009049.1 103424 104557 D PFAM: ROK family protein; transcriptional regulator TrmB; KEGG: rsp:RSP_1441 regulatory protein, GntR family; ROK family protein 103424..104557 Rhodobacter sphaeroides ATCC 17029 4895220 YP_001041983.1 CDS Rsph17029_0091 NC_009049.1 104675 105931 D PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_1442 ABC sugar transporter, periplasmic sugar-binding protein; extracellular solute-binding protein 104675..105931 Rhodobacter sphaeroides ATCC 17029 4896170 YP_001041984.1 CDS Rsph17029_0092 NC_009049.1 106020 106910 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1443 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 106020..106910 Rhodobacter sphaeroides ATCC 17029 4896294 YP_001041985.1 CDS Rsph17029_0093 NC_009049.1 106907 107755 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1444 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 106907..107755 Rhodobacter sphaeroides ATCC 17029 4897093 YP_001041986.1 CDS Rsph17029_0094 NC_009049.1 107775 108878 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1445 ABC sugar transporter, ATPase subunit; ABC transporter 107775..108878 Rhodobacter sphaeroides ATCC 17029 4897360 YP_001041987.1 CDS Rsph17029_0095 NC_009049.1 108875 109816 D PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rsp:RSP_1446 putative sugar kinase; BadF/BadG/BcrA/BcrD type ATPase 108875..109816 Rhodobacter sphaeroides ATCC 17029 4897337 YP_001041988.1 CDS Rsph17029_0096 NC_009049.1 109843 110847 D PFAM: sugar isomerase (SIS); KEGG: rsp:RSP_1447 possible glucosamine--fructose-6-phosphate aminotransferase (isomerizing); sugar isomerase (SIS) 109843..110847 Rhodobacter sphaeroides ATCC 17029 4896231 YP_001041989.1 CDS Rsph17029_0097 NC_009049.1 110902 111921 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rsp:RSP_1448 putative L-allo-threonine aldolase; threonine aldolase 110902..111921 Rhodobacter sphaeroides ATCC 17029 4896983 YP_001041990.1 CDS Rsph17029_0098 NC_009049.1 112106 112876 R PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_1449 putative transcriptional regulator of sugar metabolism; DeoR family transcriptional regulator complement(112106..112876) Rhodobacter sphaeroides ATCC 17029 4897478 YP_001041991.1 CDS Rsph17029_0099 NC_009049.1 113149 113943 D PFAM: inositol monophosphatase; KEGG: rsp:RSP_1450 inositol monophosphatase family protein; inositol monophosphatase 113149..113943 Rhodobacter sphaeroides ATCC 17029 4898005 YP_001041992.1 CDS Rsph17029_0100 NC_009049.1 114016 115590 D PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1451 ABC peptide/nickel/opine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 114016..115590 Rhodobacter sphaeroides ATCC 17029 4895336 YP_001041993.1 CDS Rsph17029_0101 NC_009049.1 115669 116649 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1452 ABC peptide/nickel/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 115669..116649 Rhodobacter sphaeroides ATCC 17029 4897350 YP_001041994.1 CDS Rsph17029_0102 NC_009049.1 116649 117560 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1453 ABC peptide/nickel/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 116649..117560 Rhodobacter sphaeroides ATCC 17029 4895239 YP_001041995.1 CDS Rsph17029_0103 NC_009049.1 117562 119415 D KEGG: rsp:RSP_1454 ABC peptide/nickel/opine transporter, fused ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 117562..119415 Rhodobacter sphaeroides ATCC 17029 4897253 YP_001041996.1 CDS Rsph17029_0104 NC_009049.1 119408 120682 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 119408..120682 Rhodobacter sphaeroides ATCC 17029 4895967 YP_001041997.1 CDS Rsph17029_0105 NC_009049.1 120679 121623 D PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: rsp:RSP_1456 hypothetical protein; aminoglycoside phosphotransferase 120679..121623 Rhodobacter sphaeroides ATCC 17029 4896914 YP_001041998.1 CDS Rsph17029_0106 NC_009049.1 121620 122564 D PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: rsp:RSP_1457 putative choline kinase; choline/ethanolamine kinase 121620..122564 Rhodobacter sphaeroides ATCC 17029 4896933 YP_001041999.1 CDS Rsph17029_0107 NC_009049.1 123074 123337 R hypothetical protein complement(123074..123337) Rhodobacter sphaeroides ATCC 17029 4896890 YP_001042000.1 CDS Rsph17029_0108 NC_009049.1 123743 125347 R KEGG: rsp:RSP_1458 putative DNA repair enzyme; putative DNA repair enzyme complement(123743..125347) Rhodobacter sphaeroides ATCC 17029 4895502 YP_001042001.1 CDS Rsph17029_0109 NC_009049.1 125572 125844 R KEGG: rsp:RSP_6001 hypothetical protein; hypothetical protein complement(125572..125844) Rhodobacter sphaeroides ATCC 17029 4896242 YP_001042002.1 CDS Rsph17029_0110 NC_009049.1 126046 126792 D KEGG: rsp:RSP_1459 hypothetical protein; hypothetical protein 126046..126792 Rhodobacter sphaeroides ATCC 17029 4895995 YP_001042003.1 CDS Rsph17029_0111 NC_009049.1 126923 127168 D KEGG: rsp:RSP_1460 hypothetical protein; hypothetical protein 126923..127168 Rhodobacter sphaeroides ATCC 17029 4895713 YP_001042004.1 CDS Rsph17029_0112 NC_009049.1 127216 128367 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rsp:RSP_1461 putative 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 127216..128367 Rhodobacter sphaeroides ATCC 17029 4895710 YP_001042005.1 CDS lpxK NC_009049.1 128367 129365 D transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 128367..129365 Rhodobacter sphaeroides ATCC 17029 4895696 YP_001042006.1 CDS Rsph17029_0114 NC_009049.1 129464 130609 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rsp:RSP_1463 putative acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F complement(129464..130609) Rhodobacter sphaeroides ATCC 17029 4895586 YP_001042007.1 CDS Rsph17029_0115 NC_009049.1 130606 131277 R KEGG: rsp:RSP_1464 putative periplasmic thiol-disulphide interchange protein (DsbA family); periplasmic thiol-disulfide interchange protein complement(130606..131277) Rhodobacter sphaeroides ATCC 17029 4895541 YP_001042008.1 CDS Rsph17029_0116 NC_009049.1 131289 131819 R PFAM: protein of unknown function DUF1159; KEGG: rsp:RSP_1465 hypothetical protein; hypothetical protein complement(131289..131819) Rhodobacter sphaeroides ATCC 17029 4895397 YP_001042009.1 CDS Rsph17029_0117 NC_009049.1 131901 133004 D TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rsp:RSP_1466 putative MutY, A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 131901..133004 Rhodobacter sphaeroides ATCC 17029 4895677 YP_001042010.1 CDS Rsph17029_0118 NC_009049.1 133042 134313 D PFAM: fatty acid desaturase; KEGG: rsp:RSP_1467 possible alkane hydroxylase (fatty acid desaturase); alkane 1-monooxygenase 133042..134313 Rhodobacter sphaeroides ATCC 17029 4898094 YP_001042011.1 CDS Rsph17029_0119 NC_009049.1 134469 135587 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rsp:RSP_1468 site-specific DNA-methyltransferase; DNA methylase N-4/N-6 domain-containing protein complement(134469..135587) Rhodobacter sphaeroides ATCC 17029 4897384 YP_001042012.1 CDS rnhB NC_009049.1 135676 136314 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(135676..136314) Rhodobacter sphaeroides ATCC 17029 4897130 YP_001042013.1 CDS Rsph17029_0121 NC_009049.1 136470 136934 R KEGG: rsp:RSP_1471 hypothetical protein; hypothetical protein complement(136470..136934) Rhodobacter sphaeroides ATCC 17029 4896889 YP_001042014.1 CDS Rsph17029_0122 NC_009049.1 137258 137581 D KEGG: rsp:RSP_6002 hypothetical protein; hypothetical protein 137258..137581 Rhodobacter sphaeroides ATCC 17029 4896788 YP_001042015.1 CDS Rsph17029_0123 NC_009049.1 137553 138257 D KEGG: rsp:RSP_1472 hypothetical protein; response regulator receiver protein 137553..138257 Rhodobacter sphaeroides ATCC 17029 4896568 YP_001042016.1 CDS Rsph17029_0124 NC_009049.1 138283 138654 R KEGG: rsp:RSP_1473 hypothetical protein; hypothetical protein complement(138283..138654) Rhodobacter sphaeroides ATCC 17029 4896312 YP_001042017.1 CDS Rsph17029_0125 NC_009049.1 138858 139955 D TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_1474 putative carboxynorspermidine decarboxylase protein; carboxynorspermidine decarboxylase 138858..139955 Rhodobacter sphaeroides ATCC 17029 4896095 YP_001042018.1 CDS Rsph17029_0126 NC_009049.1 139992 141230 D PFAM: Saccharopine dehydrogenase; KEGG: rsp:RSP_1475 saccharopine dehydrogenase family; saccharopine dehydrogenase 139992..141230 Rhodobacter sphaeroides ATCC 17029 4895972 YP_001042019.1 CDS Rsph17029_0127 NC_009049.1 141424 143367 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1476 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(141424..143367) Rhodobacter sphaeroides ATCC 17029 4895956 YP_001042020.1 CDS Rsph17029_0128 NC_009049.1 143446 143625 R KEGG: rsp:RSP_6210 hypothetical protein; hypothetical protein complement(143446..143625) Rhodobacter sphaeroides ATCC 17029 4895733 YP_001042021.1 CDS Rsph17029_0129 NC_009049.1 143652 145271 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1478 ABC oligopeptide transporter, fused ATPase subunits; ABC transporter complement(143652..145271) Rhodobacter sphaeroides ATCC 17029 4895656 YP_001042022.1 CDS Rsph17029_0130 NC_009049.1 145273 146412 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1479 ABC oligopeptide transporter, inner membrane subunit OppC; binding-protein-dependent transport system inner membrane protein complement(145273..146412) Rhodobacter sphaeroides ATCC 17029 4895529 YP_001042023.1 CDS Rsph17029_0131 NC_009049.1 146405 147328 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1480 ABC oligopeptide transporter, inner membrane subunit OppB; binding-protein-dependent transport system inner membrane protein complement(146405..147328) Rhodobacter sphaeroides ATCC 17029 4895236 YP_001042024.1 CDS Rsph17029_0132 NC_009049.1 147385 148974 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_1481 ABC oligopeptide transporter, perplasmic substrate-binding protein OppA; extracellular solute-binding protein complement(147385..148974) Rhodobacter sphaeroides ATCC 17029 4895266 YP_001042025.1 CDS Rsph17029_0133 NC_009049.1 149421 149762 R KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein complement(149421..149762) Rhodobacter sphaeroides ATCC 17029 4897408 YP_001042026.1 CDS Rsph17029_0134 NC_009049.1 149816 150175 D KEGG: rsp:RSP_1483 hypothetical protein; hypothetical protein 149816..150175 Rhodobacter sphaeroides ATCC 17029 4895123 YP_001042027.1 CDS Rsph17029_0135 NC_009049.1 150248 152629 R PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_1485 ATP-dependent RNA helicase; DEAD/DEAH box helicase complement(150248..152629) Rhodobacter sphaeroides ATCC 17029 4895575 YP_001042028.1 CDS Rsph17029_0136 NC_009049.1 152772 153377 D PFAM: regulatory protein, TetR; KEGG: rsp:RSP_1486 regulatory protein, TetR family; TetR family transcriptional regulator 152772..153377 Rhodobacter sphaeroides ATCC 17029 4896649 YP_001042029.1 CDS Rsph17029_0137 NC_009049.1 153444 153791 D PFAM: protein of unknown function DUF1428; KEGG: rsp:RSP_1487 hypothetical protein; hypothetical protein 153444..153791 Rhodobacter sphaeroides ATCC 17029 4896668 YP_001042030.1 CDS Rsph17029_0138 NC_009049.1 153793 154536 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1488 possible glyoxalase; glyoxalase/bleomycin resistance protein/dioxygenase 153793..154536 Rhodobacter sphaeroides ATCC 17029 4896284 YP_001042031.1 CDS Rsph17029_0139 NC_009049.1 154668 155582 D TIGRFAM: thioredoxin; PFAM: Tetratricopeptide TPR_4; Thioredoxin domain; KEGG: rsp:RSP_1489 protein containing thioredoxin domain; thioredoxin 154668..155582 Rhodobacter sphaeroides ATCC 17029 4895125 YP_001042032.1 CDS Rsph17029_0140 NC_009049.1 155586 156254 D PFAM: peptidase S16, lon domain protein; KEGG: rsp:RSP_1490 putative ATP-dependent protease La, LON; peptidase S16, lon domain-containing protein 155586..156254 Rhodobacter sphaeroides ATCC 17029 4895704 YP_001042033.1 CDS Rsph17029_0141 NC_009049.1 156251 156430 D PFAM: protein of unknown function DUF343; KEGG: rsp:RSP_1491 hypothetical protein; hypothetical protein 156251..156430 Rhodobacter sphaeroides ATCC 17029 4895866 YP_001042034.1 CDS Rsph17029_0142 NC_009049.1 156507 157736 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rsp:RSP_1492 UbiH/COQ6 monooxygenase family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase complement(156507..157736) Rhodobacter sphaeroides ATCC 17029 4895743 YP_001042035.1 CDS Rsph17029_0143 NC_009049.1 157818 159143 D PFAM: Amidase; KEGG: rsp:RSP_1493 amidase; amidase 157818..159143 Rhodobacter sphaeroides ATCC 17029 4896589 YP_001042036.1 CDS Rsph17029_0144 NC_009049.1 159266 160444 D PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_1494 putative aspartate aminotransferase; class I and II aminotransferase 159266..160444 Rhodobacter sphaeroides ATCC 17029 4895574 YP_001042037.1 CDS Rsph17029_0145 NC_009049.1 160455 163739 D PFAM: cell divisionFtsK/SpoIIIE; KEGG: rsp:RSP_1495 putative cell division protein; cell division protein FtsK 160455..163739 Rhodobacter sphaeroides ATCC 17029 4895639 YP_001042038.1 CDS Rsph17029_0146 NC_009049.1 163871 164509 D PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rsp:RSP_1497 putative outer membrane lipoprotein carrier protein; outer membrane lipoprotein carrier protein LolA 163871..164509 Rhodobacter sphaeroides ATCC 17029 4896354 YP_001042039.1 CDS Rsph17029_0147 NC_009049.1 164571 165152 R KEGG: rsp:RSP_1496 hypothetical protein; hypothetical protein complement(164571..165152) Rhodobacter sphaeroides ATCC 17029 4896660 YP_001042040.1 CDS Rsph17029_0148 NC_009049.1 165384 165749 D TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: rsp:RSP_1498 hypothetical protein; hemimethylated DNA binding protein 165384..165749 Rhodobacter sphaeroides ATCC 17029 4895363 YP_001042041.1 CDS Rsph17029_0149 NC_009049.1 165790 167418 R PFAM: gamma-glutamyltranspeptidase; KEGG: rsp:RSP_1499 probable gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(165790..167418) Rhodobacter sphaeroides ATCC 17029 4896168 YP_001042042.1 CDS Rsph17029_0150 NC_009049.1 167479 168021 R KEGG: rsp:RSP_1500 possible anti-sigma regulatory kinase; putative anti-sigma regulatory factor complement(167479..168021) Rhodobacter sphaeroides ATCC 17029 4895896 YP_001042043.1 CDS Rsph17029_0151 NC_009049.1 168011 168334 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rsp:RSP_1501 antisigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist complement(168011..168334) Rhodobacter sphaeroides ATCC 17029 4895505 YP_001042044.1 CDS Rsph17029_0152 NC_009049.1 168452 168904 D KEGG: rsp:RSP_1502 GAF domain protein; GAF domain-containing protein 168452..168904 Rhodobacter sphaeroides ATCC 17029 4898042 YP_001042045.1 CDS Rsph17029_0154 NC_009049.1 169308 169568 R KEGG: rsp:RSP_1504 hypothetical protein; hypothetical protein complement(169308..169568) Rhodobacter sphaeroides ATCC 17029 4895799 YP_001042046.1 CDS Rsph17029_0155 NC_009049.1 169652 170299 D PFAM: pseudouridine synthase; KEGG: rsp:RSP_1506 pseudouridine synthase, Rlu; pseudouridine synthase 169652..170299 Rhodobacter sphaeroides ATCC 17029 4898077 YP_001042047.1 CDS Rsph17029_0156 NC_009049.1 170275 171030 R PFAM: metallophosphoesterase; KEGG: rsp:RSP_1505 putative metallo-phosphoesterase; metallophosphoesterase complement(170275..171030) Rhodobacter sphaeroides ATCC 17029 4895812 YP_001042048.1 CDS Rsph17029_0157 NC_009049.1 171027 172487 R PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_1507 aldehyde dehydrogenase; aldehyde dehydrogenase complement(171027..172487) Rhodobacter sphaeroides ATCC 17029 4898062 YP_001042049.1 CDS Rsph17029_0158 NC_009049.1 173191 174639 R PFAM: HemY domain protein; KEGG: rsp:RSP_1508 uncharacterized HemY-like membrane protein; HemY domain-containing protein complement(173191..174639) Rhodobacter sphaeroides ATCC 17029 4896381 YP_001042050.1 CDS Rsph17029_0159 NC_009049.1 174650 175951 R KEGG: rsp:RSP_6207 hypothetical protein; hypothetical protein complement(174650..175951) Rhodobacter sphaeroides ATCC 17029 4898026 YP_001042051.1 CDS Rsph17029_0160 NC_009049.1 176019 176762 R PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rsp:RSP_6208 putative uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 complement(176019..176762) Rhodobacter sphaeroides ATCC 17029 4897148 YP_001042052.1 CDS Rsph17029_0161 NC_009049.1 176835 177929 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 176835..177929 Rhodobacter sphaeroides ATCC 17029 4896426 YP_001042053.1 CDS gpsA NC_009049.1 177926 178843 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 177926..178843 Rhodobacter sphaeroides ATCC 17029 4898006 YP_001042054.1 CDS Rsph17029_0163 NC_009049.1 178847 179119 D unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 178847..179119 Rhodobacter sphaeroides ATCC 17029 4898033 YP_001042055.1 CDS Rsph17029_0164 NC_009049.1 179119 179544 D PFAM: protein of unknown function DUF55; KEGG: rsp:RSP_1512 hypothetical protein; hypothetical protein 179119..179544 Rhodobacter sphaeroides ATCC 17029 4898045 YP_001042056.1 CDS Rsph17029_0165 NC_009049.1 179840 181045 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 179840..181045 Rhodobacter sphaeroides ATCC 17029 4898070 YP_001042057.1 CDS Rsph17029_0166 NC_009049.1 181203 182594 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(181203..182594) Rhodobacter sphaeroides ATCC 17029 4895515 YP_001042058.1 CDS Rsph17029_0167 NC_009049.1 182717 183673 D PFAM: glycosyl transferase, family 8; KEGG: rsp:RSP_1515 hypothetical protein of glycosyl transferase family; glycosyl transferase family protein 182717..183673 Rhodobacter sphaeroides ATCC 17029 4895205 YP_001042059.1 CDS Rsph17029_0168 NC_009049.1 183670 184254 D PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: rsp:RSP_1516 putative S-adenosyl L-homocystein hydrolase; metal dependent phosphohydrolase 183670..184254 Rhodobacter sphaeroides ATCC 17029 4897144 YP_001042060.1 CDS Rsph17029_0169 NC_009049.1 184266 184580 R PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: rsp:RSP_1517 histone-like protein of HNS family; histone family protein nucleoid-structuring protein H-NS complement(184266..184580) Rhodobacter sphaeroides ATCC 17029 4895877 YP_001042061.1 CDS Rsph17029_0170 NC_009049.1 184816 185370 R PFAM: response regulator receiver; KEGG: rsp:RSP_1518 PrrA (RegA), response regulator involved in oxygen regulation of photosynthesis genes; two component Fis family transcriptional regulator complement(184816..185370) Rhodobacter sphaeroides ATCC 17029 4897045 YP_001042062.1 CDS Rsph17029_0171 NC_009049.1 185363 186058 R PFAM: electron transport protein SCO1/SenC; KEGG: rsp:RSP_1519 PrrC; electron transport protein SCO1/SenC complement(185363..186058) Rhodobacter sphaeroides ATCC 17029 4897591 YP_001042063.1 CDS Rsph17029_0172 NC_009049.1 186150 187538 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1520 sensor histidine kinase PrrB (RegB); integral membrane sensor signal transduction histidine kinase 186150..187538 Rhodobacter sphaeroides ATCC 17029 4898009 YP_001042064.1 CDS Rsph17029_0173 NC_009049.1 187665 189227 D KEGG: rsp:RSP_1521 hypothetical protein; hypothetical protein 187665..189227 Rhodobacter sphaeroides ATCC 17029 4897134 YP_001042065.1 CDS Rsph17029_0174 NC_009049.1 189460 189969 D PFAM: protein of unknown function UPF0079; KEGG: rsp:RSP_1522 hypothetical protein; hypothetical protein 189460..189969 Rhodobacter sphaeroides ATCC 17029 4895411 YP_001042066.1 CDS Rsph17029_0175 NC_009049.1 189962 190987 D PFAM: aminoglycoside phosphotransferase; KEGG: rsp:RSP_1523 hypothetical protein; aminoglycoside phosphotransferase 189962..190987 Rhodobacter sphaeroides ATCC 17029 4895909 YP_001042067.1 CDS Rsph17029_0176 NC_009049.1 190969 191634 D PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1524 nucleotidyltransferase family protein; nucleotidyl transferase 190969..191634 Rhodobacter sphaeroides ATCC 17029 4898010 YP_001042068.1 CDS Rsph17029_0177 NC_009049.1 191627 194620 D KEGG: rsp:RSP_1525 putative helicase/exonuclease; putative helicase/exonuclease 191627..194620 Rhodobacter sphaeroides ATCC 17029 4898049 YP_001042069.1 CDS Rsph17029_0178 NC_009049.1 194649 197969 D TIGRFAM: UvrD-like DNA helicase, C terminal; PFAM: UvrD/REP helicase; KEGG: rsp:RSP_1527 helicase, UvrD/Rep family; UvrD-like DNA helicase, C terminal 194649..197969 Rhodobacter sphaeroides ATCC 17029 4896369 YP_001042070.1 CDS Rsph17029_0179 NC_009049.1 198028 198348 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rsp:RSP_1529 thioredoxin; thioredoxin 198028..198348 Rhodobacter sphaeroides ATCC 17029 4895805 YP_001042071.1 CDS Rsph17029_0180 NC_009049.1 198481 199389 R KEGG: rsp:RSP_1530 hypothetical protein; hypothetical protein complement(198481..199389) Rhodobacter sphaeroides ATCC 17029 4898018 YP_001042072.1 CDS Rsph17029_0181 NC_009049.1 199526 200083 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 199526..200083 Rhodobacter sphaeroides ATCC 17029 4898034 YP_001042073.1 CDS hslU NC_009049.1 200080 201381 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 200080..201381 Rhodobacter sphaeroides ATCC 17029 4898016 YP_001042074.1 CDS Rsph17029_0183 NC_009049.1 201432 202964 R PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: rsp:RSP_1533 putative alginate O-acetyltransferase; membrane bound O-acyl transferase, MBOAT family protein complement(201432..202964) Rhodobacter sphaeroides ATCC 17029 4895945 YP_001042075.1 CDS Rsph17029_0184 NC_009049.1 202964 203209 R KEGG: rsp:RSP_1534 putative acyl carrier protein; putative acyl carrier protein complement(202964..203209) Rhodobacter sphaeroides ATCC 17029 4898004 YP_001042076.1 CDS Rsph17029_0185 NC_009049.1 203270 205183 R TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: rsp:RSP_1535 hypothetical protein; FkbH-like protein complement(203270..205183) Rhodobacter sphaeroides ATCC 17029 4898044 YP_001042077.1 CDS Rsph17029_0186 NC_009049.1 205164 205904 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_6005 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(205164..205904) Rhodobacter sphaeroides ATCC 17029 4898065 YP_001042078.1 CDS Rsph17029_0187 NC_009049.1 205901 206305 R PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_1536 conserved hypothetical protein that may be involved in lipid metabolism; dehydratase complement(205901..206305) Rhodobacter sphaeroides ATCC 17029 4898025 YP_001042079.1 CDS Rsph17029_0188 NC_009049.1 206583 207497 D KEGG: rsp:RSP_1537 hypothetical protein; hypothetical protein 206583..207497 Rhodobacter sphaeroides ATCC 17029 4898066 YP_001042080.1 CDS Rsph17029_0189 NC_009049.1 207576 208349 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1538 probable glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 207576..208349 Rhodobacter sphaeroides ATCC 17029 4898052 YP_001042081.1 CDS Rsph17029_0190 NC_009049.1 208585 209592 R PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_1539 glycosyl transferase, family 2; glycosyl transferase family protein complement(208585..209592) Rhodobacter sphaeroides ATCC 17029 4896593 YP_001042082.1 CDS Rsph17029_0191 NC_009049.1 209934 211028 R KEGG: rsp:RSP_1540 predicted secreted hydrolase; secreted hydrolase complement(209934..211028) Rhodobacter sphaeroides ATCC 17029 4896574 YP_001042083.1 CDS Rsph17029_0192 NC_009049.1 211018 213405 R PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_1541 putative ABC transporter, fused inner membrane subunits; hypothetical protein complement(211018..213405) Rhodobacter sphaeroides ATCC 17029 4897349 YP_001042084.1 CDS Rsph17029_0193 NC_009049.1 213402 214082 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1542 ABC transporter, ATPase subunit; ABC transporter complement(213402..214082) Rhodobacter sphaeroides ATCC 17029 4896846 YP_001042085.1 CDS Rsph17029_0194 NC_009049.1 214368 215426 R PFAM: Uncharacterised conserved protein UCP028101; KEGG: rsp:RSP_1543 hypothetical protein; hypothetical protein complement(214368..215426) Rhodobacter sphaeroides ATCC 17029 4897589 YP_001042086.1 CDS Rsph17029_0195 NC_009049.1 215428 216417 R KEGG: rsp:RSP_1544 hypothetical signal peptide protein; putative signal peptide protein complement(215428..216417) Rhodobacter sphaeroides ATCC 17029 4895412 YP_001042087.1 CDS Rsph17029_0196 NC_009049.1 216417 217925 R PFAM: protein of unknown function DUF1111; KEGG: rsp:RSP_1545 probable thiol oxidoreductase with 2 cytochrome c heme-binding sites; hypothetical protein complement(216417..217925) Rhodobacter sphaeroides ATCC 17029 4895650 YP_001042088.1 CDS Rsph17029_0197 NC_009049.1 218104 218589 R TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rsp:RSP_1546 bacterioferritin; bacterioferritin complement(218104..218589) Rhodobacter sphaeroides ATCC 17029 4895424 YP_001042089.1 CDS Rsph17029_0198 NC_009049.1 218579 218833 R KEGG: rsp:RSP_1547 probable bacterioferritin-associated ferredoxin; putative bacterioferritin-associated ferredoxin complement(218579..218833) Rhodobacter sphaeroides ATCC 17029 4897570 YP_001042090.1 CDS Rsph17029_0199 NC_009049.1 218915 220240 R KEGG: rsp:RSP_1548 putative iron-regulated protein; putative iron-regulated protein complement(218915..220240) Rhodobacter sphaeroides ATCC 17029 4895306 YP_001042091.1 CDS Rsph17029_0200 NC_009049.1 220237 220398 R KEGG: rsp:RSP_6006 hypothetical protein; hypothetical protein complement(220237..220398) Rhodobacter sphaeroides ATCC 17029 4897107 YP_001042092.1 CDS Rsph17029_0201 NC_009049.1 220749 221432 D PFAM: protein of unknown function DUF533; KEGG: rsp:RSP_1549 hypothetical protein; hypothetical protein 220749..221432 Rhodobacter sphaeroides ATCC 17029 4898037 YP_001042093.1 CDS Rsph17029_0202 NC_009049.1 221445 222275 R PFAM: regulatory proteins, IclR; KEGG: rsp:RSP_1550 regulatory proteins, IclR family; regulatory proteins, IclR complement(221445..222275) Rhodobacter sphaeroides ATCC 17029 4897172 YP_001042094.1 CDS Rsph17029_0203 NC_009049.1 222543 222923 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1551 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 222543..222923 Rhodobacter sphaeroides ATCC 17029 4895436 YP_001042095.1 CDS Rsph17029_0204 NC_009049.1 223041 223532 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(223041..223532) Rhodobacter sphaeroides ATCC 17029 4897210 YP_001042096.1 CDS Rsph17029_0205 NC_009049.1 223649 224485 R PFAM: protein of unknown function DUF861, cupin_3; Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_1553 probable glyoxylate induced protein; hypothetical protein complement(223649..224485) Rhodobacter sphaeroides ATCC 17029 4898053 YP_001042097.1 CDS Rsph17029_0206 NC_009049.1 224482 225897 R PFAM: polysaccharide deacetylase; KEGG: rsp:RSP_1554 possible polysaccharide deacetylase; polysaccharide deacetylase complement(224482..225897) Rhodobacter sphaeroides ATCC 17029 4897476 YP_001042098.1 CDS Rsph17029_0207 NC_009049.1 226044 226397 D PFAM: Transthyretin; KEGG: rsp:RSP_1555 transthyretin-like protein; transthyretin 226044..226397 Rhodobacter sphaeroides ATCC 17029 4896356 YP_001042099.1 CDS Rsph17029_0208 NC_009049.1 226641 226796 D PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_1556 light-harvesting complex, beta subunit; antenna complex subunit alpha/beta 226641..226796 Rhodobacter sphaeroides ATCC 17029 4896985 YP_001042100.1 CDS Rsph17029_0209 NC_009049.1 226810 227583 D PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6158 light-harvesting complex alpha subunit; antenna complex subunit alpha/beta 226810..227583 Rhodobacter sphaeroides ATCC 17029 4896562 YP_001042101.1 CDS Rsph17029_0210 NC_009049.1 228028 229242 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 228028..229242 Rhodobacter sphaeroides ATCC 17029 4896066 YP_001042102.1 CDS Rsph17029_0211 NC_009049.1 229561 230535 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(229561..230535) Rhodobacter sphaeroides ATCC 17029 4897558 YP_001042103.1 CDS Rsph17029_0212 NC_009049.1 230532 232067 R PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1561 AMP-forming acyl-CoA synthetase/ligase; AMP-dependent synthetase and ligase complement(230532..232067) Rhodobacter sphaeroides ATCC 17029 4895293 YP_001042104.1 CDS Rsph17029_0213 NC_009049.1 232200 232886 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_1562 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase complement(232200..232886) Rhodobacter sphaeroides ATCC 17029 4895482 YP_001042105.1 CDS Rsph17029_0214 NC_009049.1 232953 233936 R PFAM: luciferase family protein; KEGG: rsp:RSP_1563 putative oxidoreductase; luciferase family protein complement(232953..233936) Rhodobacter sphaeroides ATCC 17029 4895538 YP_001042106.1 CDS Rsph17029_0215 NC_009049.1 234013 235233 R PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_1564 putative transmembrane transport protein; hypothetical protein complement(234013..235233) Rhodobacter sphaeroides ATCC 17029 4895797 YP_001042107.1 CDS Rsph17029_0216 NC_009049.1 235325 236677 R PFAM: BLUF domain protein; KEGG: rsp:RSP_1565 AppA, antirepressor of PpsR, sensor of blue light; BLUF domain-containing protein complement(235325..236677) Rhodobacter sphaeroides ATCC 17029 4895976 YP_001042108.1 CDS Rsph17029_0217 NC_009049.1 237150 237839 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rsp:RSP_1566 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 237150..237839 Rhodobacter sphaeroides ATCC 17029 4896450 YP_001042109.1 CDS Rsph17029_0218 NC_009049.1 237873 240440 R KEGG: rsp:RSP_1567 probable sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(237873..240440) Rhodobacter sphaeroides ATCC 17029 4896592 YP_001042110.1 CDS Rsph17029_0219 NC_009049.1 240508 241902 R PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_1568 glutamine synthetase; glutamine synthetase complement(240508..241902) Rhodobacter sphaeroides ATCC 17029 4896627 YP_001042111.1 CDS Rsph17029_0220 NC_009049.1 241911 243284 R PFAM: aminotransferase class-III; KEGG: rsp:RSP_1569 glutamate-1-semialdehyde 2,1-aminomutase; aminotransferase complement(241911..243284) Rhodobacter sphaeroides ATCC 17029 4896944 YP_001042112.1 CDS Rsph17029_0221 NC_009049.1 243281 244363 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(243281..244363) Rhodobacter sphaeroides ATCC 17029 4897094 YP_001042113.1 CDS Rsph17029_0222 NC_009049.1 244356 244841 R KEGG: rsp:RSP_1571 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(244356..244841) Rhodobacter sphaeroides ATCC 17029 4897497 YP_001042114.1 CDS Rsph17029_0223 NC_009049.1 245077 245295 R PFAM: protein of unknown function DUF465; KEGG: rsp:RSP_6218 hypothetical protein; hypothetical protein complement(245077..245295) Rhodobacter sphaeroides ATCC 17029 4897642 YP_001042115.1 CDS Rsph17029_0224 NC_009049.1 245623 246090 D PFAM: heat shock protein Hsp20; KEGG: rsp:RSP_1572 heat shock protein, HSP20 family; heat shock protein Hsp20 245623..246090 Rhodobacter sphaeroides ATCC 17029 4897924 YP_001042116.1 CDS Rsph17029_0225 NC_009049.1 246087 246311 D PFAM: protein of unknown function DUF1150; KEGG: rsp:RSP_1573 hypothetical protein; hypothetical protein 246087..246311 Rhodobacter sphaeroides ATCC 17029 4897997 YP_001042117.1 CDS Rsph17029_0226 NC_009049.1 246585 247061 D PFAM: cytochrome B561; KEGG: rsp:RSP_1574 cytochrome b562; cytochrome B561 246585..247061 Rhodobacter sphaeroides ATCC 17029 4898000 YP_001042118.1 CDS Rsph17029_0227 NC_009049.1 247151 248857 R in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase complement(247151..248857) Rhodobacter sphaeroides ATCC 17029 4898030 YP_001042119.1 CDS Rsph17029_0228 NC_009049.1 249049 249987 R KEGG: rsp:RSP_1576 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(249049..249987) Rhodobacter sphaeroides ATCC 17029 4898031 YP_001042120.1 CDS Rsph17029_0229 NC_009049.1 250209 250709 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1577 proline dehydrogenase transcriptional activator; AsnC family transcriptional regulator 250209..250709 Rhodobacter sphaeroides ATCC 17029 4898039 YP_001042121.1 CDS Rsph17029_0230 NC_009049.1 250830 251582 R PFAM: protein of unknown function DUF152; KEGG: rsp:RSP_1578 conserved hypothetical protein TIGR00726; hypothetical protein complement(250830..251582) Rhodobacter sphaeroides ATCC 17029 4898047 YP_001042122.1 CDS Rsph17029_0231 NC_009049.1 251579 252640 R PFAM: protein of unknown function DUF185; KEGG: rsp:RSP_1579 hypothetical protein; hypothetical protein complement(251579..252640) Rhodobacter sphaeroides ATCC 17029 4898043 YP_001042123.1 CDS Rsph17029_0232 NC_009049.1 252637 253515 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(252637..253515) Rhodobacter sphaeroides ATCC 17029 4898051 YP_001042124.1 CDS Rsph17029_0233 NC_009049.1 253620 253868 D PFAM: protein of unknown function DUF526; KEGG: rsp:RSP_1581 hypothetical protein; hypothetical protein 253620..253868 Rhodobacter sphaeroides ATCC 17029 4898059 YP_001042125.1 CDS Rsph17029_0234 NC_009049.1 254288 254557 D KEGG: rsp:RSP_1582 putative sulfate transporter/antisigma-factor antagonist; putative sulfate transporter/antisigma-factor antagonist 254288..254557 Rhodobacter sphaeroides ATCC 17029 4898067 YP_001042126.1 CDS Rsph17029_0235 NC_009049.1 254554 254919 D PFAM: response regulator receiver; KEGG: rsp:RSP_1583 chemotaxis response regulator, CheY3; response regulator receiver protein 254554..254919 Rhodobacter sphaeroides ATCC 17029 4898073 YP_001042127.1 CDS Rsph17029_0236 NC_009049.1 254916 256880 D PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rsp:RSP_1584 chemotaxis histidine protein kinase; CheA signal transduction histidine kinase 254916..256880 Rhodobacter sphaeroides ATCC 17029 4895723 YP_001042128.1 CDS Rsph17029_0237 NC_009049.1 256877 257368 D PFAM: CheW domain protein; KEGG: rsp:RSP_1585 chemotaxis protein, CheW2; putative CheW protein 256877..257368 Rhodobacter sphaeroides ATCC 17029 4898021 YP_001042129.1 CDS Rsph17029_0238 NC_009049.1 257492 258028 D PFAM: CheW domain protein; KEGG: rsp:RSP_1586 chemotaxis protein, CheW3; putative CheW protein 257492..258028 Rhodobacter sphaeroides ATCC 17029 4896796 YP_001042130.1 CDS Rsph17029_0239 NC_009049.1 258025 258861 D PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_1587 chemotaxis methyltransferase, CheR2; protein-glutamate O-methyltransferase 258025..258861 Rhodobacter sphaeroides ATCC 17029 4896816 YP_001042131.1 CDS Rsph17029_0240 NC_009049.1 258864 259973 D PFAM: CheB methylesterase; response regulator receiver; KEGG: rsp:RSP_1588 chemotaxis methylesterase, CheB1; response regulator receiver modulated CheB methylesterase 258864..259973 Rhodobacter sphaeroides ATCC 17029 4896412 YP_001042132.1 CDS Rsph17029_0241 NC_009049.1 259970 261712 D KEGG: rsp:RSP_1589 transducer-like protein, TlpC; transducer-like protein, TlpC 259970..261712 Rhodobacter sphaeroides ATCC 17029 4896068 YP_001042133.1 CDS Rsph17029_0242 NC_009049.1 261760 262761 D KEGG: rsp:RSP_1591 predicted glutathione S-transferase; glutathione S-transferase 261760..262761 Rhodobacter sphaeroides ATCC 17029 4897382 YP_001042134.1 CDS Rsph17029_0243 NC_009049.1 262731 264188 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_1590 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator complement(262731..264188) Rhodobacter sphaeroides ATCC 17029 4897362 YP_001042135.1 CDS Rsph17029_0244 NC_009049.1 264185 264736 R KEGG: rsp:RSP_6007 hypothetical protein; hypothetical protein complement(264185..264736) Rhodobacter sphaeroides ATCC 17029 4897675 YP_001042136.1 CDS Rsph17029_0245 NC_009049.1 264972 266864 R PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1592 possible acyl-CoA sythetase; AMP-dependent synthetase and ligase complement(264972..266864) Rhodobacter sphaeroides ATCC 17029 4897609 YP_001042137.1 CDS Rsph17029_0246 NC_009049.1 267025 269304 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(267025..269304) Rhodobacter sphaeroides ATCC 17029 4896567 YP_001042138.1 CDS Rsph17029_0247 NC_009049.1 269515 269907 D TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rsp:RSP_1594 cytidine deaminase; cytidine deaminase 269515..269907 Rhodobacter sphaeroides ATCC 17029 4897665 YP_001042139.1 CDS deoA NC_009049.1 269909 271216 D Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 269909..271216 Rhodobacter sphaeroides ATCC 17029 4897868 YP_001042140.1 CDS Rsph17029_0249 NC_009049.1 271216 272412 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 271216..272412 Rhodobacter sphaeroides ATCC 17029 4895561 YP_001042141.1 CDS Rsph17029_0250 NC_009049.1 272409 273392 D catalyzes the formation of inosine from adenosine; adenosine deaminase 272409..273392 Rhodobacter sphaeroides ATCC 17029 4896012 YP_001042142.1 CDS upp NC_009049.1 273385 274017 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 273385..274017 Rhodobacter sphaeroides ATCC 17029 4896505 YP_001042143.1 CDS Rsph17029_0252 NC_009049.1 274084 275031 D PFAM: Sporulation domain protein; KEGG: rsp:RSP_6008 hypothetical protein; sporulation domain-containing protein 274084..275031 Rhodobacter sphaeroides ATCC 17029 4896425 YP_001042144.1 CDS Rsph17029_0253 NC_009049.1 275178 276197 R KEGG: rsp:RSP_6009 hypothetical protein; hypothetical protein complement(275178..276197) Rhodobacter sphaeroides ATCC 17029 4897198 YP_001042145.1 CDS Rsph17029_0254 NC_009049.1 276278 277927 R PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_1599 AMP-binding protein; AMP-dependent synthetase and ligase complement(276278..277927) Rhodobacter sphaeroides ATCC 17029 4897994 YP_001042146.1 CDS Rsph17029_0255 NC_009049.1 278026 278958 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1600 possible transporter, DME family, DMT superfamily; hypothetical protein 278026..278958 Rhodobacter sphaeroides ATCC 17029 4898015 YP_001042147.1 CDS Rsph17029_0256 NC_009049.1 278962 279591 R PFAM: Methyltransferase type 11; KEGG: rsp:RSP_1601 hypothetical protein; type 11 methyltransferase complement(278962..279591) Rhodobacter sphaeroides ATCC 17029 4898028 YP_001042148.1 CDS Rsph17029_0257 NC_009049.1 279765 281036 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1602 TRAP-T family transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM complement(279765..281036) Rhodobacter sphaeroides ATCC 17029 4898038 YP_001042149.1 CDS Rsph17029_0258 NC_009049.1 281061 281546 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_1604 TRAP-T family transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ complement(281061..281546) Rhodobacter sphaeroides ATCC 17029 4898050 YP_001042150.1 CDS Rsph17029_0259 NC_009049.1 281616 282590 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_1605 TRAP-T family transporter, periplasmic binding protein, DctP; TRAP dicarboxylate transporter- DctP subunit complement(281616..282590) Rhodobacter sphaeroides ATCC 17029 4898041 YP_001042151.1 CDS Rsph17029_0260 NC_009049.1 282614 283315 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1606 putative regulatory protein, GntR family; GntR family transcriptional regulator complement(282614..283315) Rhodobacter sphaeroides ATCC 17029 4898074 YP_001042152.1 CDS Rsph17029_0261 NC_009049.1 283428 284330 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1607 putative regulatory protein, GntR family; GntR family transcriptional regulator complement(283428..284330) Rhodobacter sphaeroides ATCC 17029 4898076 YP_001042153.1 CDS Rsph17029_0262 NC_009049.1 284471 285454 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1608 putative Zn-dependent dehydrogenase; alcohol dehydrogenase 284471..285454 Rhodobacter sphaeroides ATCC 17029 4895281 YP_001042154.1 CDS Rsph17029_0263 NC_009049.1 285447 286547 D PFAM: Mannitol dehydrogenase, C-terminal domain; KEGG: rsp:RSP_1609 putative altronate dehydrogenase; mannitol dehydrogenase domain-containing protein 285447..286547 Rhodobacter sphaeroides ATCC 17029 4895257 YP_001042155.1 CDS Rsph17029_0264 NC_009049.1 286544 288046 D PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain; KEGG: rsp:RSP_1610 altronate hydrolase; altronate dehydratase 286544..288046 Rhodobacter sphaeroides ATCC 17029 4896561 YP_001042156.1 CDS Rsph17029_0265 NC_009049.1 288123 289916 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1611 sensor histidine kinase; histidine kinase 288123..289916 Rhodobacter sphaeroides ATCC 17029 4896774 YP_001042157.1 CDS Rsph17029_0266 NC_009049.1 289913 291232 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_1612 sigma-54 dependent transcriptional regulator; two component, sigma54 specific, Fis family transcriptional regulator 289913..291232 Rhodobacter sphaeroides ATCC 17029 4895844 YP_001042158.1 CDS Rsph17029_0267 NC_009049.1 291443 292396 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_1613 TRAP-T family transporter, DctP subunit; TRAP transporter solute receptor TAXI family protein 291443..292396 Rhodobacter sphaeroides ATCC 17029 4895802 YP_001042159.1 CDS Rsph17029_0268 NC_009049.1 292500 293594 D TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1614 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP transporter, 4TM/12TM fusion protein 292500..293594 Rhodobacter sphaeroides ATCC 17029 4895228 YP_001042160.1 CDS Rsph17029_0269 NC_009049.1 293667 294617 D PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1614 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP dicarboxylate transporter subunit DctM 293667..294617 Rhodobacter sphaeroides ATCC 17029 4895609 YP_001042161.1 CDS Rsph17029_0270 NC_009049.1 294614 294982 D KEGG: rsp:RSP_1615 hypothetical protein; hypothetical protein 294614..294982 Rhodobacter sphaeroides ATCC 17029 4895705 YP_001042162.1 CDS Rsph17029_0272 NC_009049.1 296073 296789 D hypothetical protein 296073..296789 Rhodobacter sphaeroides ATCC 17029 4896940 YP_001042163.1 CDS Rsph17029_0273 NC_009049.1 297607 297867 D hypothetical protein 297607..297867 Rhodobacter sphaeroides ATCC 17029 4897815 YP_001042164.1 CDS Rsph17029_0274 NC_009049.1 297943 299121 D TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: nwi:Nwi_1628 phage portal protein, HK97; HK97 family phage portal protein 297943..299121 Rhodobacter sphaeroides ATCC 17029 4896380 YP_001042165.1 CDS Rsph17029_0275 NC_009049.1 299111 299506 D KEGG: nwi:Nwi_1627 hypothetical protein; hypothetical protein 299111..299506 Rhodobacter sphaeroides ATCC 17029 4896310 YP_001042166.1 CDS Rsph17029_0276 NC_009049.1 299506 300012 D TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: nha:Nham_2490 peptidase U35, phage prohead HK97; HK97 family phage prohead protease 299506..300012 Rhodobacter sphaeroides ATCC 17029 4896959 YP_001042167.1 CDS Rsph17029_0277 NC_009049.1 300012 301169 D TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: nwi:Nwi_1625 phage major capsid protein, HK97; HK97 family phage major capsid protein 300012..301169 Rhodobacter sphaeroides ATCC 17029 4896429 YP_001042168.1 CDS Rsph17029_0278 NC_009049.1 301182 301559 D KEGG: nha:Nham_2488 hypothetical protein; hypothetical protein 301182..301559 Rhodobacter sphaeroides ATCC 17029 4897995 YP_001042169.1 CDS Rsph17029_0279 NC_009049.1 301562 301921 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2355 HNH nuclease / probable phage PHI-105 holin-like protein; HNH endonuclease 301562..301921 Rhodobacter sphaeroides ATCC 17029 4897998 YP_001042170.1 CDS Rsph17029_0280 NC_009049.1 301918 302391 D KEGG: mes:Meso_1894 hypothetical protein; hypothetical protein 301918..302391 Rhodobacter sphaeroides ATCC 17029 4898014 YP_001042171.1 CDS Rsph17029_0281 NC_009049.1 302396 302824 D hypothetical protein 302396..302824 Rhodobacter sphaeroides ATCC 17029 4897246 YP_001042172.1 CDS Rsph17029_0282 NC_009049.1 302821 303135 D KEGG: nwi:Nwi_1622 uncharacterized phage protein (possible DNA packaging); phage protein 302821..303135 Rhodobacter sphaeroides ATCC 17029 4897686 YP_001042173.1 CDS Rsph17029_0283 NC_009049.1 303135 303548 D TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: nwi:Nwi_1621 phage protein, HK97, GP10; HK97 family phage protein 303135..303548 Rhodobacter sphaeroides ATCC 17029 4898071 YP_001042174.1 CDS Rsph17029_0284 NC_009049.1 303545 303958 D KEGG: nwi:Nwi_1620 hypothetical protein; hypothetical protein 303545..303958 Rhodobacter sphaeroides ATCC 17029 4898055 YP_001042175.1 CDS Rsph17029_0285 NC_009049.1 303958 304281 D PFAM: phage head-tail adaptor, putative; KEGG: nwi:Nwi_1619 phage head-tail adaptor, putative; phage head-tail adaptor 303958..304281 Rhodobacter sphaeroides ATCC 17029 4895548 YP_001042176.1 CDS Rsph17029_0286 NC_009049.1 304281 304715 D TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; KEGG: nwi:Nwi_1473 phage terminase, small subunit, putative, P27; P27 family phage terminase small subunit 304281..304715 Rhodobacter sphaeroides ATCC 17029 4898075 YP_001042177.1 CDS Rsph17029_0287 NC_009049.1 304712 306319 D PFAM: phage Terminase; KEGG: nwi:Nwi_1472 phage terminase; phage terminase 304712..306319 Rhodobacter sphaeroides ATCC 17029 4895311 YP_001042178.1 CDS Rsph17029_0288 NC_009049.1 306330 308675 D KEGG: rsp:RSP_2351 hypothetical protein; hypothetical protein 306330..308675 Rhodobacter sphaeroides ATCC 17029 4895559 YP_001042179.1 CDS Rsph17029_0289 NC_009049.1 308675 309031 D KEGG: nwi:Nwi_1614 hypothetical protein; hypothetical protein 308675..309031 Rhodobacter sphaeroides ATCC 17029 4895390 YP_001042180.1 CDS Rsph17029_0290 NC_009049.1 310583 310933 D hypothetical protein 310583..310933 Rhodobacter sphaeroides ATCC 17029 4896711 YP_001042181.1 CDS Rsph17029_0291 NC_009049.1 310936 311286 D hypothetical protein 310936..311286 Rhodobacter sphaeroides ATCC 17029 4895833 YP_001042182.1 CDS Rsph17029_0292 NC_009049.1 311713 312777 D PFAM: phage integrase family protein; KEGG: gox:GOX2318 prophage integrase; phage integrase family protein 311713..312777 Rhodobacter sphaeroides ATCC 17029 4895196 YP_001042183.1 CDS Rsph17029_0294 NC_009049.1 313218 313676 R KEGG: rsp:RSP_1618 hypothetical protein; hypothetical protein complement(313218..313676) Rhodobacter sphaeroides ATCC 17029 4897024 YP_001042184.1 CDS Rsph17029_0296 NC_009049.1 314475 315512 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1663 putative transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator 314475..315512 Rhodobacter sphaeroides ATCC 17029 4896886 YP_001042185.1 CDS Rsph17029_0297 NC_009049.1 315519 315971 R KEGG: rsp:RSP_1664 hypothetical protein; hypothetical protein complement(315519..315971) Rhodobacter sphaeroides ATCC 17029 4895706 YP_001042186.1 CDS Rsph17029_0298 NC_009049.1 315968 316576 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_1665 putative RhtB family transporter; lysine exporter protein LysE/YggA complement(315968..316576) Rhodobacter sphaeroides ATCC 17029 4895298 YP_001042187.1 CDS ispH NC_009049.1 316587 317546 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(316587..317546) Rhodobacter sphaeroides ATCC 17029 4897711 YP_001042188.1 CDS Rsph17029_0300 NC_009049.1 317697 318269 R PFAM: protein of unknown function DUF88; KEGG: rsp:RSP_1667 hypothetical protein; hypothetical protein complement(317697..318269) Rhodobacter sphaeroides ATCC 17029 4897855 YP_001042189.1 CDS Rsph17029_0301 NC_009049.1 318459 318995 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: rsp:RSP_1668 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 318459..318995 Rhodobacter sphaeroides ATCC 17029 4895284 YP_001042190.1 CDS Rsph17029_0302 NC_009049.1 319080 319433 D Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 319080..319433 Rhodobacter sphaeroides ATCC 17029 4895766 YP_001042191.1 CDS Rsph17029_0303 NC_009049.1 319464 321581 D KEGG: rsp:RSP_1670 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 319464..321581 Rhodobacter sphaeroides ATCC 17029 4896333 YP_001042192.1 CDS Rsph17029_0304 NC_009049.1 321598 322254 D KEGG: rsp:RSP_1671 hypothetical protein; hypothetical protein 321598..322254 Rhodobacter sphaeroides ATCC 17029 4895519 YP_001042193.1 CDS Rsph17029_0305 NC_009049.1 322291 323049 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 322291..323049 Rhodobacter sphaeroides ATCC 17029 4896643 YP_001042194.1 CDS acpS NC_009049.1 323081 323494 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 323081..323494 Rhodobacter sphaeroides ATCC 17029 4896039 YP_001042195.1 CDS Rsph17029_0307 NC_009049.1 323566 324354 D KEGG: rsp:RSP_1674 type 1 signal peptidase; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 323566..324354 Rhodobacter sphaeroides ATCC 17029 4896775 YP_001042196.1 CDS Rsph17029_0308 NC_009049.1 324351 325040 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rsp:RSP_1675 ribonuclease III; ribonuclease III 324351..325040 Rhodobacter sphaeroides ATCC 17029 4896639 YP_001042197.1 CDS era NC_009049.1 325033 325947 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 325033..325947 Rhodobacter sphaeroides ATCC 17029 4895460 YP_001042198.1 CDS Rsph17029_0310 NC_009049.1 325969 326304 D PFAM: protein of unknown function DUF1491; KEGG: rsp:RSP_1677 hypothetical protein; hypothetical protein 325969..326304 Rhodobacter sphaeroides ATCC 17029 4895506 YP_001042199.1 CDS recO NC_009049.1 326341 327060 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 326341..327060 Rhodobacter sphaeroides ATCC 17029 4896967 YP_001042200.1 CDS Rsph17029_0312 NC_009049.1 327100 328767 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_1679 acyl-CoA dehydrogenase; isovaleryl-CoA dehydrogenase complement(327100..328767) Rhodobacter sphaeroides ATCC 17029 4896571 YP_001042201.1 CDS Rsph17029_0313 NC_009049.1 329491 331089 R PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase complement(329491..331089) Rhodobacter sphaeroides ATCC 17029 4896517 YP_001042202.1 CDS Rsph17029_0314 NC_009049.1 331428 332129 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1681 two-component transcriptional regulator, winged helix family; two component transcriptional regulator 331428..332129 Rhodobacter sphaeroides ATCC 17029 4895072 YP_001042203.1 CDS Rsph17029_0315 NC_009049.1 332152 333870 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1682 two-component sensor histidine kinase; histidine kinase 332152..333870 Rhodobacter sphaeroides ATCC 17029 4896303 YP_001042204.1 CDS Rsph17029_0316 NC_009049.1 333867 334295 D KEGG: rsp:RSP_1683 putative kinase/phosphatase; HPr kinase 333867..334295 Rhodobacter sphaeroides ATCC 17029 4896287 YP_001042205.1 CDS Rsph17029_0317 NC_009049.1 334317 335225 D PFAM: Uncharacterised P-loop ATPase protein UPF0042; KEGG: rsp:RSP_1684 hypothetical protein; hypothetical protein 334317..335225 Rhodobacter sphaeroides ATCC 17029 4896210 YP_001042206.1 CDS Rsph17029_0318 NC_009049.1 335222 335620 D PFAM: PTS system fructose subfamily IIA component; KEGG: rsp:RSP_1685 PTS system, IIA component; PTS system fructose subfamily transporter subunit IIA 335222..335620 Rhodobacter sphaeroides ATCC 17029 4896708 YP_001042207.1 CDS Rsph17029_0319 NC_009049.1 335617 335886 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rsp:RSP_1686 putative phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 335617..335886 Rhodobacter sphaeroides ATCC 17029 4895730 YP_001042208.1 CDS Rsph17029_0320 NC_009049.1 336030 337127 D PFAM: acyltransferase 3; KEGG: rsp:RSP_1688 possible acyltransferase; acyltransferase 3 336030..337127 Rhodobacter sphaeroides ATCC 17029 4895347 YP_001042209.1 CDS Rsph17029_0321 NC_009049.1 337094 337969 R converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase complement(337094..337969) Rhodobacter sphaeroides ATCC 17029 4896086 YP_001042210.1 CDS Rsph17029_0322 NC_009049.1 338138 338962 D KEGG: rsp:RSP_1689 hypothetical protein; hypothetical protein 338138..338962 Rhodobacter sphaeroides ATCC 17029 4896135 YP_001042211.1 CDS Rsph17029_0323 NC_009049.1 339012 339938 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rsp:RSP_1690 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(339012..339938) Rhodobacter sphaeroides ATCC 17029 4896158 YP_001042212.1 CDS Rsph17029_0324 NC_009049.1 339938 340699 R PFAM: electron transfer flavoprotein beta-subunit; KEGG: rsp:RSP_1691 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(339938..340699) Rhodobacter sphaeroides ATCC 17029 4896077 YP_001042213.1 CDS Rsph17029_0325 NC_009049.1 340830 341408 R TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rsp:RSP_1692 hypothetical protein; ATP--cobalamin adenosyltransferase complement(340830..341408) Rhodobacter sphaeroides ATCC 17029 4895674 YP_001042214.1 CDS Rsph17029_0326 NC_009049.1 341408 341617 R KEGG: rsp:RSP_6016 hypothetical protein; hypothetical protein complement(341408..341617) Rhodobacter sphaeroides ATCC 17029 4895434 YP_001042215.1 CDS Rsph17029_0327 NC_009049.1 341785 342600 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1694 probable short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(341785..342600) Rhodobacter sphaeroides ATCC 17029 4895756 YP_001042216.1 CDS Rsph17029_0328 NC_009049.1 342900 343460 R PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: rsp:RSP_1695 hypothetical protein; SH3 type 3 domain-containing protein complement(342900..343460) Rhodobacter sphaeroides ATCC 17029 4895856 YP_001042217.1 CDS Rsph17029_0329 NC_009049.1 343594 345897 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 343594..345897 Rhodobacter sphaeroides ATCC 17029 4895913 YP_001042218.1 CDS Rsph17029_0330 NC_009049.1 346055 346630 D KEGG: rsp:RSP_1697 hypothetical protein; hypothetical protein 346055..346630 Rhodobacter sphaeroides ATCC 17029 4895908 YP_001042219.1 CDS Rsph17029_0331 NC_009049.1 346731 347906 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 346731..347906 Rhodobacter sphaeroides ATCC 17029 4895847 YP_001042220.1 CDS Rsph17029_0332 NC_009049.1 348074 348718 D KEGG: rsp:RSP_1706 putative acetyltransferase; putative acetyltransferase 348074..348718 Rhodobacter sphaeroides ATCC 17029 4896673 YP_001042221.1 CDS secE NC_009049.1 348961 349155 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 348961..349155 Rhodobacter sphaeroides ATCC 17029 4897935 YP_001042222.1 CDS Rsph17029_0334 NC_009049.1 349318 349851 D KEGG: rsp:RSP_1704 probable transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 349318..349851 Rhodobacter sphaeroides ATCC 17029 4896693 YP_001042223.1 CDS rplK NC_009049.1 349944 350396 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 349944..350396 Rhodobacter sphaeroides ATCC 17029 4896683 YP_001042224.1 CDS rplA NC_009049.1 350400 351098 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 350400..351098 Rhodobacter sphaeroides ATCC 17029 4897332 YP_001042225.1 CDS rplJ NC_009049.1 351337 351852 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 351337..351852 Rhodobacter sphaeroides ATCC 17029 4897536 YP_001042226.1 CDS rplL NC_009049.1 351922 352299 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 351922..352299 Rhodobacter sphaeroides ATCC 17029 4896022 YP_001042227.1 CDS rpoB NC_009049.1 352544 356677 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 352544..356677 Rhodobacter sphaeroides ATCC 17029 4896030 YP_001042228.1 CDS Rsph17029_0340 NC_009049.1 356759 361006 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 356759..361006 Rhodobacter sphaeroides ATCC 17029 4896029 YP_001042229.1 CDS Rsph17029_0341 NC_009049.1 361198 362124 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1711 possible transporter, RhaT family, DMT superfamily; hypothetical protein 361198..362124 Rhodobacter sphaeroides ATCC 17029 4897504 YP_001042230.1 CDS rpsL NC_009049.1 362337 362708 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 362337..362708 Rhodobacter sphaeroides ATCC 17029 4895887 YP_001042231.1 CDS Rsph17029_0343 NC_009049.1 362721 363191 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 362721..363191 Rhodobacter sphaeroides ATCC 17029 4897139 YP_001042232.1 CDS Rsph17029_0344 NC_009049.1 363216 365333 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 363216..365333 Rhodobacter sphaeroides ATCC 17029 4897133 YP_001042233.1 CDS Rsph17029_0345 NC_009049.1 365408 366583 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 365408..366583 Rhodobacter sphaeroides ATCC 17029 4895253 YP_001042234.1 CDS Rsph17029_0346 NC_009049.1 366751 367395 D KEGG: rsp:RSP_1706 putative acetyltransferase; putative acetyltransferase 366751..367395 Rhodobacter sphaeroides ATCC 17029 4895408 YP_001042235.1 CDS secE NC_009049.1 367638 367832 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 367638..367832 Rhodobacter sphaeroides ATCC 17029 4895911 YP_001042236.1 CDS Rsph17029_0348 NC_009049.1 367995 368528 D KEGG: rsp:RSP_1704 probable transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 367995..368528 Rhodobacter sphaeroides ATCC 17029 4895948 YP_001042237.1 CDS rplK NC_009049.1 368621 369073 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 368621..369073 Rhodobacter sphaeroides ATCC 17029 4895740 YP_001042238.1 CDS rplA NC_009049.1 369077 369775 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 369077..369775 Rhodobacter sphaeroides ATCC 17029 4895073 YP_001042239.1 CDS rplJ NC_009049.1 370014 370529 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 370014..370529 Rhodobacter sphaeroides ATCC 17029 4895166 YP_001042240.1 CDS rplL NC_009049.1 370599 370976 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 370599..370976 Rhodobacter sphaeroides ATCC 17029 4897047 YP_001042241.1 CDS rpoB NC_009049.1 371221 375354 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 371221..375354 Rhodobacter sphaeroides ATCC 17029 4897688 YP_001042242.1 CDS Rsph17029_0354 NC_009049.1 375436 379683 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 375436..379683 Rhodobacter sphaeroides ATCC 17029 4896241 YP_001042243.1 CDS Rsph17029_0355 NC_009049.1 379875 380801 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1711 possible transporter, RhaT family, DMT superfamily; hypothetical protein 379875..380801 Rhodobacter sphaeroides ATCC 17029 4896105 YP_001042244.1 CDS rpsL NC_009049.1 381014 381385 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 381014..381385 Rhodobacter sphaeroides ATCC 17029 4896637 YP_001042245.1 CDS Rsph17029_0357 NC_009049.1 381398 381868 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 381398..381868 Rhodobacter sphaeroides ATCC 17029 4896437 YP_001042246.1 CDS Rsph17029_0358 NC_009049.1 381893 384010 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 381893..384010 Rhodobacter sphaeroides ATCC 17029 4895140 YP_001042247.1 CDS Rsph17029_0359 NC_009049.1 384085 385260 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 384085..385260 Rhodobacter sphaeroides ATCC 17029 4896590 YP_001042248.1 CDS rpsJ NC_009049.1 385333 385641 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 385333..385641 Rhodobacter sphaeroides ATCC 17029 4895640 YP_001042249.1 CDS rplC NC_009049.1 385655 386377 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 385655..386377 Rhodobacter sphaeroides ATCC 17029 4896020 YP_001042250.1 CDS rplD NC_009049.1 386367 386987 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 386367..386987 Rhodobacter sphaeroides ATCC 17029 4896982 YP_001042251.1 CDS rplW NC_009049.1 386984 387280 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 386984..387280 Rhodobacter sphaeroides ATCC 17029 4896108 YP_001042252.1 CDS rplB NC_009049.1 387403 388242 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 387403..388242 Rhodobacter sphaeroides ATCC 17029 4896298 YP_001042253.1 CDS rpsS NC_009049.1 388246 388524 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 388246..388524 Rhodobacter sphaeroides ATCC 17029 4896136 YP_001042254.1 CDS rplV NC_009049.1 388528 388908 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 388528..388908 Rhodobacter sphaeroides ATCC 17029 4895286 YP_001042255.1 CDS rpsC NC_009049.1 388908 389624 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 388908..389624 Rhodobacter sphaeroides ATCC 17029 4895785 YP_001042256.1 CDS rplP NC_009049.1 389639 390052 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 389639..390052 Rhodobacter sphaeroides ATCC 17029 4896084 YP_001042257.1 CDS Rsph17029_0369 NC_009049.1 390291 390497 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 390291..390497 Rhodobacter sphaeroides ATCC 17029 4895870 YP_001042258.1 CDS rpsQ NC_009049.1 390511 390753 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 390511..390753 Rhodobacter sphaeroides ATCC 17029 4896007 YP_001042259.1 CDS rplN NC_009049.1 390827 391195 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 390827..391195 Rhodobacter sphaeroides ATCC 17029 4896691 YP_001042260.1 CDS rplX NC_009049.1 391195 391500 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 391195..391500 Rhodobacter sphaeroides ATCC 17029 4896518 YP_001042261.1 CDS rplE NC_009049.1 391500 392060 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 391500..392060 Rhodobacter sphaeroides ATCC 17029 4895907 YP_001042262.1 CDS rpsN NC_009049.1 392080 392385 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 392080..392385 Rhodobacter sphaeroides ATCC 17029 4896031 YP_001042263.1 CDS rpsH NC_009049.1 392398 392796 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 392398..392796 Rhodobacter sphaeroides ATCC 17029 4895942 YP_001042264.1 CDS rplF NC_009049.1 392807 393340 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 392807..393340 Rhodobacter sphaeroides ATCC 17029 4895918 YP_001042265.1 CDS rplR NC_009049.1 393352 393711 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 393352..393711 Rhodobacter sphaeroides ATCC 17029 4896507 YP_001042266.1 CDS rpsE NC_009049.1 393723 394286 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 393723..394286 Rhodobacter sphaeroides ATCC 17029 4896583 YP_001042267.1 CDS rpmD NC_009049.1 394299 394487 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 394299..394487 Rhodobacter sphaeroides ATCC 17029 4898079 YP_001042268.1 CDS rplO NC_009049.1 394644 395129 D late assembly protein; 50S ribosomal protein L15 394644..395129 Rhodobacter sphaeroides ATCC 17029 4896797 YP_001042269.1 CDS secY NC_009049.1 395230 396588 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 395230..396588 Rhodobacter sphaeroides ATCC 17029 4896324 YP_001042270.1 CDS adk NC_009049.1 396599 397252 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 396599..397252 Rhodobacter sphaeroides ATCC 17029 4895830 YP_001042271.1 CDS rpsM NC_009049.1 397427 397795 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 397427..397795 Rhodobacter sphaeroides ATCC 17029 4896804 YP_001042272.1 CDS Rsph17029_0384 NC_009049.1 397809 398198 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 397809..398198 Rhodobacter sphaeroides ATCC 17029 4897219 YP_001042273.1 CDS Rsph17029_0385 NC_009049.1 398314 399330 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 398314..399330 Rhodobacter sphaeroides ATCC 17029 4895715 YP_001042274.1 CDS rplQ NC_009049.1 399431 399850 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 399431..399850 Rhodobacter sphaeroides ATCC 17029 4896439 YP_001042275.1 CDS Rsph17029_0387 NC_009049.1 400109 400720 D PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rsp:RSP_1741 possible LuxR family protein; response regulator receiver protein 400109..400720 Rhodobacter sphaeroides ATCC 17029 4897583 YP_001042276.1 CDS Rsph17029_0388 NC_009049.1 400776 402161 D KEGG: rsp:RSP_1742 serine protease, trypsin family; TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; protease Do 400776..402161 Rhodobacter sphaeroides ATCC 17029 4897569 YP_001042277.1 CDS Rsph17029_0389 NC_009049.1 402200 403513 D PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_1743 ATPase, AAA family; recombination factor protein RarA 402200..403513 Rhodobacter sphaeroides ATCC 17029 4895188 YP_001042278.1 CDS Rsph17029_0390 NC_009049.1 403545 403919 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 403545..403919 Rhodobacter sphaeroides ATCC 17029 4895391 YP_001042279.1 CDS Rsph17029_0391 NC_009049.1 403916 404956 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rsp:RSP_1745 pseudouridine synthase; RluA family pseudouridine synthase 403916..404956 Rhodobacter sphaeroides ATCC 17029 4895490 YP_001042280.1 CDS Rsph17029_0392 NC_009049.1 404956 405663 D PFAM: ATP12 ATPase; KEGG: rsp:RSP_1746 hypothetical protein; ATP12 ATPase 404956..405663 Rhodobacter sphaeroides ATCC 17029 4895614 YP_001042281.1 CDS Rsph17029_0393 NC_009049.1 405890 406906 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_1747 ABC glutamate/glutamine/aspartate/asparagine transporter, periplasmic substrate-binding protein; cationic amino acid ABC transporter substrate-binding protein 405890..406906 Rhodobacter sphaeroides ATCC 17029 4895636 YP_001042282.1 CDS Rsph17029_0394 NC_009049.1 407055 408317 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1748 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztB; polar amino acid ABC transporter inner membrane subunit 407055..408317 Rhodobacter sphaeroides ATCC 17029 4895729 YP_001042283.1 CDS Rsph17029_0395 NC_009049.1 408319 409647 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1749 ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; polar amino acid ABC transporter inner membrane subunit 408319..409647 Rhodobacter sphaeroides ATCC 17029 4895676 YP_001042284.1 CDS Rsph17029_0396 NC_009049.1 409660 410448 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1750 ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit BztD; ABC transporter 409660..410448 Rhodobacter sphaeroides ATCC 17029 4895924 YP_001042285.1 CDS Rsph17029_0397 NC_009049.1 410658 411026 D PFAM: ferredoxin; KEGG: rsp:RSP_1751 putative 2Fe-2S ferredoxin protein; ferredoxin 410658..411026 Rhodobacter sphaeroides ATCC 17029 4895836 YP_001042286.1 CDS Rsph17029_0398 NC_009049.1 411333 412538 D PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_1752 putative creatinase; peptidase M24 411333..412538 Rhodobacter sphaeroides ATCC 17029 4896280 YP_001042287.1 CDS Rsph17029_0399 NC_009049.1 412777 414948 D KEGG: rsp:RSP_1753 hypothetical protein; hypothetical protein 412777..414948 Rhodobacter sphaeroides ATCC 17029 4896082 YP_001042288.1 CDS Rsph17029_0400 NC_009049.1 415323 416132 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1754 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 415323..416132 Rhodobacter sphaeroides ATCC 17029 4896016 YP_001042289.1 CDS Rsph17029_0401 NC_009049.1 416178 416519 R PFAM: protein of unknown function DUF861, cupin_3; KEGG: rsp:RSP_1755 hypothetical protein; hypothetical protein complement(416178..416519) Rhodobacter sphaeroides ATCC 17029 4896217 YP_001042290.1 CDS panB NC_009049.1 416684 417517 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 416684..417517 Rhodobacter sphaeroides ATCC 17029 4896267 YP_001042291.1 CDS panC NC_009049.1 417517 418356 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 417517..418356 Rhodobacter sphaeroides ATCC 17029 4896230 YP_001042292.1 CDS Rsph17029_0404 NC_009049.1 418463 419734 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(418463..419734) Rhodobacter sphaeroides ATCC 17029 4896050 YP_001042293.1 CDS Rsph17029_0405 NC_009049.1 419865 420134 D KEGG: rsp:RSP_1759 hypothetical protein; hypothetical protein 419865..420134 Rhodobacter sphaeroides ATCC 17029 4895963 YP_001042294.1 CDS Rsph17029_0406 NC_009049.1 420142 420798 D PFAM: protein of unknown function DUF1523; KEGG: rsp:RSP_1760 hypothetical protein; hypothetical protein 420142..420798 Rhodobacter sphaeroides ATCC 17029 4896002 YP_001042295.1 CDS pheT NC_009049.1 420909 423326 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(420909..423326) Rhodobacter sphaeroides ATCC 17029 4896762 YP_001042296.1 CDS Rsph17029_0408 NC_009049.1 423716 424432 R KEGG: rsp:RSP_1762 hypothetical protein; hypothetical protein complement(423716..424432) Rhodobacter sphaeroides ATCC 17029 4896173 YP_001042297.1 CDS pheS NC_009049.1 424466 425548 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(424466..425548) Rhodobacter sphaeroides ATCC 17029 4896776 YP_001042298.1 CDS rplT NC_009049.1 425753 426115 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(425753..426115) Rhodobacter sphaeroides ATCC 17029 4896630 YP_001042299.1 CDS rpmI NC_009049.1 426128 426328 R PFAM: ribosomal protein L35; KEGG: rsp:RSP_1765 50S ribosomal protein L35; 50S ribosomal protein L35 complement(426128..426328) Rhodobacter sphaeroides ATCC 17029 4896640 YP_001042300.1 CDS Rsph17029_0412 NC_009049.1 426444 427889 R PFAM: pyruvate kinase; KEGG: rsp:RSP_1766 pyruvate kinase; pyruvate kinase complement(426444..427889) Rhodobacter sphaeroides ATCC 17029 4896739 YP_001042301.1 CDS Rsph17029_0413 NC_009049.1 428030 428767 D PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_1767 possible N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 428030..428767 Rhodobacter sphaeroides ATCC 17029 4896757 YP_001042302.1 CDS Rsph17029_0414 NC_009049.1 429102 429962 R PFAM: aminotransferase, class IV; KEGG: rsp:RSP_1768 aminotransferase class IV , putative D-alanine aminotransferase; aminotransferase, class IV complement(429102..429962) Rhodobacter sphaeroides ATCC 17029 4897264 YP_001042303.1 CDS Rsph17029_0415 NC_009049.1 429965 430927 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rsp:RSP_1769 mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(429965..430927) Rhodobacter sphaeroides ATCC 17029 4895604 YP_001042304.1 CDS Rsph17029_0416 NC_009049.1 431037 432038 R PFAM: protein of unknown function DUF1611; KEGG: rsp:RSP_1770 hypothetical protein; hypothetical protein complement(431037..432038) Rhodobacter sphaeroides ATCC 17029 4896741 YP_001042305.1 CDS Rsph17029_0417 NC_009049.1 432306 433262 D PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_1771 beta subunit of citrate lyase; citryl-CoA lyase 432306..433262 Rhodobacter sphaeroides ATCC 17029 4896207 YP_001042306.1 CDS Rsph17029_0418 NC_009049.1 433353 433817 R PFAM: transcription activator, effector binding; KEGG: rsp:RSP_6018 hypothetical protein; transcription activator, effector binding complement(433353..433817) Rhodobacter sphaeroides ATCC 17029 4897087 YP_001042307.1 CDS Rsph17029_0419 NC_009049.1 434038 434997 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 434038..434997 Rhodobacter sphaeroides ATCC 17029 4895750 YP_001042308.1 CDS Rsph17029_0420 NC_009049.1 434994 435308 D PFAM: small multidrug resistance protein; KEGG: rsp:RSP_1773 multidrug efflux pump, SMR family, DMT superfamily; small multidrug resistance protein 434994..435308 Rhodobacter sphaeroides ATCC 17029 4896764 YP_001042309.1 CDS Rsph17029_0421 NC_009049.1 435458 436636 D PFAM: glucose sorbosone dehydrogenase; KEGG: rsp:RSP_1774 putative glucose dehydrogenase B; glucose sorbosone dehydrogenase 435458..436636 Rhodobacter sphaeroides ATCC 17029 4895973 YP_001042310.1 CDS Rsph17029_0422 NC_009049.1 436661 437620 R KEGG: rsp:RSP_1775 hypothetical protein; hypothetical protein complement(436661..437620) Rhodobacter sphaeroides ATCC 17029 4895727 YP_001042311.1 CDS greA NC_009049.1 437631 438101 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(437631..438101) Rhodobacter sphaeroides ATCC 17029 4895964 YP_001042312.1 CDS Rsph17029_0424 NC_009049.1 438374 440029 D PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rsp:RSP_1777 putative electron transfer flavoprotein-ubiquinone oxidoreductase precursor; electron-transferring-flavoprotein dehydrogenase 438374..440029 Rhodobacter sphaeroides ATCC 17029 4895623 YP_001042313.1 CDS Rsph17029_0425 NC_009049.1 440129 441829 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_1778 TPR domain protein; hypothetical protein 440129..441829 Rhodobacter sphaeroides ATCC 17029 4896036 YP_001042314.1 CDS Rsph17029_0426 NC_009049.1 441822 442658 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 441822..442658 Rhodobacter sphaeroides ATCC 17029 4896274 YP_001042315.1 CDS Rsph17029_0427 NC_009049.1 442804 443313 D KEGG: rsp:RSP_1780 hypothetical protein; hypothetical protein 442804..443313 Rhodobacter sphaeroides ATCC 17029 4896206 YP_001042316.1 CDS Rsph17029_0428 NC_009049.1 443321 444778 R KEGG: rsp:RSP_1781 putative membrane-anchored oxidoreductase; similar to L-sorbosone dehydrogenase; putative membrane-anchored oxidoreductase complement(443321..444778) Rhodobacter sphaeroides ATCC 17029 4896662 YP_001042317.1 CDS Rsph17029_0429 NC_009049.1 444771 445226 R KEGG: rsp:RSP_1782 hypothetical membrane protein; hypothetical protein complement(444771..445226) Rhodobacter sphaeroides ATCC 17029 4896644 YP_001042318.1 CDS Rsph17029_0430 NC_009049.1 445374 446468 D KEGG: rsp:RSP_1783 predicted membrane protein; membrane protein 445374..446468 Rhodobacter sphaeroides ATCC 17029 4897131 YP_001042319.1 CDS Rsph17029_0431 NC_009049.1 446496 446870 R PFAM: response regulator receiver; KEGG: rsp:RSP_1784 response regulator receiver domain protein; response regulator receiver protein complement(446496..446870) Rhodobacter sphaeroides ATCC 17029 4895755 YP_001042320.1 CDS Rsph17029_0432 NC_009049.1 447242 448246 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1785 putative transcriptional regulatory protein; periplasmic binding protein/LacI transcriptional regulator complement(447242..448246) Rhodobacter sphaeroides ATCC 17029 4895526 YP_001042321.1 CDS Rsph17029_0433 NC_009049.1 448414 450930 D TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; PFAM: phosphocarrier HPr protein; PEP-utilizing enzyme; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rsp:RSP_1786 multi-component fructose specific PTS system protein, (PtsI, HPr, and IIA domains); phosphoenolpyruvate-protein phosphotransferase 448414..450930 Rhodobacter sphaeroides ATCC 17029 4896317 YP_001042322.1 CDS Rsph17029_0434 NC_009049.1 450927 451913 D PFAM: PfkB domain protein; KEGG: rsp:RSP_1787 probable 1-phosphofructokinase; 1-phosphofructokinase 450927..451913 Rhodobacter sphaeroides ATCC 17029 4896377 YP_001042323.1 CDS Rsph17029_0435 NC_009049.1 451910 453655 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: rsp:RSP_1788 PTS system, fructose-specificIIBC component; PTS system fructose subfamily transporter subunit IIC 451910..453655 Rhodobacter sphaeroides ATCC 17029 4896182 YP_001042324.1 CDS Rsph17029_0436 NC_009049.1 453763 454089 R PFAM: protein of unknown function UPF0060; KEGG: rsp:RSP_1789 hypothetical protein; hypothetical protein complement(453763..454089) Rhodobacter sphaeroides ATCC 17029 4895929 YP_001042325.1 CDS Rsph17029_0437 NC_009049.1 454089 454574 R PFAM: regulatory protein, MerR; KEGG: rsp:RSP_1790 probable transcriptional regulator; MerR family transcriptional regulator complement(454089..454574) Rhodobacter sphaeroides ATCC 17029 4897927 YP_001042326.1 CDS Rsph17029_0438 NC_009049.1 454598 456820 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1791 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 454598..456820 Rhodobacter sphaeroides ATCC 17029 4896408 YP_001042327.1 CDS Rsph17029_0439 NC_009049.1 456944 457465 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rsp:RSP_1793 single-strand DNA binding protein; single-strand binding protein complement(456944..457465) Rhodobacter sphaeroides ATCC 17029 4897996 YP_001042328.1 CDS Rsph17029_0440 NC_009049.1 457679 458293 D PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1794 putative lytic transglycosylase; lytic transglycosylase, catalytic 457679..458293 Rhodobacter sphaeroides ATCC 17029 4897224 YP_001042329.1 CDS Rsph17029_0441 NC_009049.1 458417 459709 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(458417..459709) Rhodobacter sphaeroides ATCC 17029 4896184 YP_001042330.1 CDS Rsph17029_0442 NC_009049.1 459816 460373 R PFAM: superoxide dismutase, copper/zinc binding; KEGG: rsp:RSP_1796 putative copper/zinc superoxide dismutase; superoxide dismutase, copper/zinc binding complement(459816..460373) Rhodobacter sphaeroides ATCC 17029 4897524 YP_001042331.1 CDS Rsph17029_0443 NC_009049.1 460657 460983 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rsp:RSP_1797 putative preprotein translocase subunit YajC; preprotein translocase subunit YajC 460657..460983 Rhodobacter sphaeroides ATCC 17029 4896744 YP_001042332.1 CDS secD NC_009049.1 460999 462663 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 460999..462663 Rhodobacter sphaeroides ATCC 17029 4896141 YP_001042333.1 CDS secF NC_009049.1 462673 463647 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 462673..463647 Rhodobacter sphaeroides ATCC 17029 4896070 YP_001042334.1 CDS Rsph17029_0446 NC_009049.1 463823 464176 D PFAM: protein of unknown function DUF498; KEGG: rsp:RSP_1800 hypothetical protein; hypothetical protein 463823..464176 Rhodobacter sphaeroides ATCC 17029 4896318 YP_001042335.1 CDS Rsph17029_0447 NC_009049.1 464244 464876 D ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 464244..464876 Rhodobacter sphaeroides ATCC 17029 4895669 YP_001042336.1 CDS Rsph17029_0448 NC_009049.1 464873 465529 D TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rsp:RSP_1802 ABC heme exporter, inner membrane subunit CcmB; heme exporter protein CcmB 464873..465529 Rhodobacter sphaeroides ATCC 17029 4896476 YP_001042337.1 CDS Rsph17029_0449 NC_009049.1 465572 466306 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rsp:RSP_1803 ABC heme exporter, inner membrane subunit CcmC; heme exporter protein CcmC 465572..466306 Rhodobacter sphaeroides ATCC 17029 4896686 YP_001042338.1 CDS Rsph17029_0450 NC_009049.1 466303 466464 D PFAM: Heme exporter protein D (CcmD); KEGG: rsp:RSP_1804 heme exporter protein D; Heme exporter protein CcmD 466303..466464 Rhodobacter sphaeroides ATCC 17029 4896900 YP_001042339.1 CDS Rsph17029_0451 NC_009049.1 466457 466996 D TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: rsp:RSP_1805 probable thiol-disulfide interchange protein; periplasmic protein thiol--disulfide oxidoreductase DsbE 466457..466996 Rhodobacter sphaeroides ATCC 17029 4896269 YP_001042340.1 CDS Rsph17029_0452 NC_009049.1 467196 469880 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(467196..469880) Rhodobacter sphaeroides ATCC 17029 4895961 YP_001042341.1 CDS Rsph17029_0453 NC_009049.1 470102 470809 D PFAM: protein of unknown function DUF1223; KEGG: rsp:RSP_1807 hypothetical protein; hypothetical protein 470102..470809 Rhodobacter sphaeroides ATCC 17029 4896671 YP_001042342.1 CDS Rsph17029_0454 NC_009049.1 470988 472046 R KEGG: rsp:RSP_6019 hypothetical protein; hypothetical protein complement(470988..472046) Rhodobacter sphaeroides ATCC 17029 4895745 YP_001042343.1 CDS Rsph17029_0455 NC_009049.1 472043 473116 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(472043..473116) Rhodobacter sphaeroides ATCC 17029 4897566 YP_001042344.1 CDS Rsph17029_0456 NC_009049.1 473178 473864 D PFAM: Rhomboid family protein; KEGG: sil:SPO0393 rhomboid family protein; rhomboid family protein 473178..473864 Rhodobacter sphaeroides ATCC 17029 4896382 YP_001042345.1 CDS Rsph17029_0457 NC_009049.1 473897 475438 R TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rsp:RSP_1810 putative virulence factor, MviN; integral membrane protein MviN complement(473897..475438) Rhodobacter sphaeroides ATCC 17029 4896273 YP_001042346.1 CDS Rsph17029_0458 NC_009049.1 475435 478227 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(475435..478227) Rhodobacter sphaeroides ATCC 17029 4898092 YP_001042347.1 CDS Rsph17029_0459 NC_009049.1 478211 479386 R KEGG: rsp:RSP_1812 hypothetical protein; hypothetical protein complement(478211..479386) Rhodobacter sphaeroides ATCC 17029 4896528 YP_001042348.1 CDS Rsph17029_0460 NC_009049.1 479469 480356 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_1813 hypothetical protein; Fis family transcriptional regulator 479469..480356 Rhodobacter sphaeroides ATCC 17029 4897433 YP_001042349.1 CDS Rsph17029_0461 NC_009049.1 480353 480706 D PFAM: protein of unknown function UPF0102; KEGG: rsp:RSP_1814 putative endonuclease; hypothetical protein 480353..480706 Rhodobacter sphaeroides ATCC 17029 4897576 YP_001042350.1 CDS Rsph17029_0462 NC_009049.1 480765 481709 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 480765..481709 Rhodobacter sphaeroides ATCC 17029 4897636 YP_001042351.1 CDS Rsph17029_0463 NC_009049.1 482073 483611 R KEGG: rsp:RSP_1816 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(482073..483611) Rhodobacter sphaeroides ATCC 17029 4898091 YP_001042352.1 CDS Rsph17029_0464 NC_009049.1 483700 483936 R KEGG: rsp:RSP_1817 hypothetical protein; hypothetical protein complement(483700..483936) Rhodobacter sphaeroides ATCC 17029 4896841 YP_001042353.1 CDS Rsph17029_0465 NC_009049.1 483943 486255 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rsp:RSP_1818 Fe2+ transport system protein B; ferrous iron transport protein B complement(483943..486255) Rhodobacter sphaeroides ATCC 17029 4897613 YP_001042354.1 CDS Rsph17029_0466 NC_009049.1 486252 486491 R PFAM: FeoA family protein; KEGG: rsp:RSP_1819 ferrous iron transport protein A; FeoA family protein complement(486252..486491) Rhodobacter sphaeroides ATCC 17029 4897289 YP_001042355.1 CDS Rsph17029_0467 NC_009049.1 486498 486746 R PFAM: FeoA family protein; KEGG: rsp:RSP_6020 ferrous iron transport protein A; FeoA family protein complement(486498..486746) Rhodobacter sphaeroides ATCC 17029 4897914 YP_001042356.1 CDS Rsph17029_0468 NC_009049.1 487348 487845 R PFAM: protein of unknown function DUF892; KEGG: rsp:RSP_1820 hypothetical protein; hypothetical protein complement(487348..487845) Rhodobacter sphaeroides ATCC 17029 4897281 YP_001042357.1 CDS Rsph17029_0469 NC_009049.1 488040 490340 R KEGG: rsp:RSP_1821 molybdopterin-containing oxidoreductase, probable formate dehydrogenase; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit complement(488040..490340) Rhodobacter sphaeroides ATCC 17029 4895958 YP_001042358.1 CDS Rsph17029_0470 NC_009049.1 490589 492133 D TIGRFAM: NAD+ synthetase; PFAM: NAD+ synthase; CinA domain protein; KEGG: rsp:RSP_1822 hypothetical protein; NAD+ synthetase 490589..492133 Rhodobacter sphaeroides ATCC 17029 4897910 YP_001042359.1 CDS mogA NC_009049.1 492156 492701 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(492156..492701) Rhodobacter sphaeroides ATCC 17029 4896653 YP_001042360.1 CDS Rsph17029_0472 NC_009049.1 492993 494117 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1824 zinc-containing alcohol dehydrogenase; alcohol dehydrogenase 492993..494117 Rhodobacter sphaeroides ATCC 17029 4895587 YP_001042361.1 CDS Rsph17029_0473 NC_009049.1 494157 495578 R PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rsp:RSP_1825 probable modulator of DNA gyrase; C69 family peptidase complement(494157..495578) Rhodobacter sphaeroides ATCC 17029 4897008 YP_001042362.1 CDS Rsph17029_0474 NC_009049.1 495748 496659 D PFAM: cytochrome c oxidase, subunit II; cytochrome C oxidase subunit II, transmembrane region; KEGG: rsp:RSP_1826 cytochrome c oxidase polypeptide II precursor (cytochrome AA3 subunit 2); cytochrome-c oxidase 495748..496659 Rhodobacter sphaeroides ATCC 17029 4898035 YP_001042363.1 CDS Rsph17029_0475 NC_009049.1 496730 497662 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 496730..497662 Rhodobacter sphaeroides ATCC 17029 4895360 YP_001042364.1 CDS Rsph17029_0476 NC_009049.1 497664 497840 D KEGG: rsp:RSP_6021 hypothetical protein; hypothetical protein 497664..497840 Rhodobacter sphaeroides ATCC 17029 4896343 YP_001042365.1 CDS Rsph17029_0477 NC_009049.1 497837 498412 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 497837..498412 Rhodobacter sphaeroides ATCC 17029 4896344 YP_001042366.1 CDS Rsph17029_0478 NC_009049.1 498440 499240 D PFAM: cytochrome c oxidase, subunit III; KEGG: rsp:RSP_1829 cytochrome c oxidase, aa3-type, subunit III; cytochrome c oxidase subunit III 498440..499240 Rhodobacter sphaeroides ATCC 17029 4897357 YP_001042367.1 CDS Rsph17029_0479 NC_009049.1 499427 500098 D KEGG: rsp:RSP_1830 SURF1 protein; SURF1 protein 499427..500098 Rhodobacter sphaeroides ATCC 17029 4896203 YP_001042368.1 CDS Rsph17029_0480 NC_009049.1 500110 501495 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 500110..501495 Rhodobacter sphaeroides ATCC 17029 4897990 YP_001042369.1 CDS Rsph17029_0481 NC_009049.1 501492 502751 D PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1832 peptidase, M16 family; processing peptidase 501492..502751 Rhodobacter sphaeroides ATCC 17029 4896309 YP_001042370.1 CDS Rsph17029_0482 NC_009049.1 502751 503335 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1833 putative ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 502751..503335 Rhodobacter sphaeroides ATCC 17029 4896559 YP_001042371.1 CDS Rsph17029_0483 NC_009049.1 503667 504473 D KEGG: rsp:RSP_1834 hypothetical protein; hypothetical protein 503667..504473 Rhodobacter sphaeroides ATCC 17029 4895365 YP_001042372.1 CDS Rsph17029_0484 NC_009049.1 504512 505927 D PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1835 putative FAD dependent oxidoreductase; FAD linked oxidase domain-containing protein 504512..505927 Rhodobacter sphaeroides ATCC 17029 4897028 YP_001042373.1 CDS Rsph17029_0485 NC_009049.1 506056 506592 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(506056..506592) Rhodobacter sphaeroides ATCC 17029 4897075 YP_001042374.1 CDS Rsph17029_0486 NC_009049.1 506597 507469 R Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase complement(506597..507469) Rhodobacter sphaeroides ATCC 17029 4895348 YP_001042375.1 CDS Rsph17029_0487 NC_009049.1 507774 508358 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_1838 hypothetical protein; flavin reductase domain-containing protein complement(507774..508358) Rhodobacter sphaeroides ATCC 17029 4895666 YP_001042376.1 CDS Rsph17029_0488 NC_009049.1 508439 508924 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1839 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 508439..508924 Rhodobacter sphaeroides ATCC 17029 4896955 YP_001042377.1 CDS Rsph17029_0489 NC_009049.1 509056 509907 D KEGG: rsp:RSP_1840 hypothetical protein; hypothetical protein 509056..509907 Rhodobacter sphaeroides ATCC 17029 4896402 YP_001042378.1 CDS Rsph17029_0490 NC_009049.1 509955 510557 R PFAM: Intracellular septation protein A; KEGG: rsp:RSP_1841 probable intracellular septation protein; intracellular septation protein A complement(509955..510557) Rhodobacter sphaeroides ATCC 17029 4896995 YP_001042379.1 CDS Rsph17029_0491 NC_009049.1 510569 511474 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1842 possible transporter, DME family, DMT superfamily; hypothetical protein complement(510569..511474) Rhodobacter sphaeroides ATCC 17029 4896375 YP_001042380.1 CDS Rsph17029_0492 NC_009049.1 511590 512729 R KEGG: rsp:RSP_1843 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(511590..512729) Rhodobacter sphaeroides ATCC 17029 4896536 YP_001042381.1 CDS Rsph17029_0493 NC_009049.1 512921 513319 D KEGG: rsp:RSP_1844 hypothetical protein; hypothetical protein 512921..513319 Rhodobacter sphaeroides ATCC 17029 4896793 YP_001042382.1 CDS xseA NC_009049.1 513440 514999 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(513440..514999) Rhodobacter sphaeroides ATCC 17029 4897035 YP_001042383.1 CDS Rsph17029_0495 NC_009049.1 515230 515583 R KEGG: rsp:RSP_1846 hypothetical protein; hypothetical protein complement(515230..515583) Rhodobacter sphaeroides ATCC 17029 4897173 YP_001042384.1 CDS Rsph17029_0496 NC_009049.1 515743 517005 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 515743..517005 Rhodobacter sphaeroides ATCC 17029 4896365 YP_001042385.1 CDS Rsph17029_0497 NC_009049.1 517210 518736 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(517210..518736) Rhodobacter sphaeroides ATCC 17029 4897451 YP_001042386.1 CDS Rsph17029_0498 NC_009049.1 518946 520205 D KEGG: rsp:RSP_1849 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 518946..520205 Rhodobacter sphaeroides ATCC 17029 4896672 YP_001042387.1 CDS Rsph17029_0499 NC_009049.1 520230 522473 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rsp:RSP_1850 phosphoenolpyruvate-protein phosphotransferase, PtsI(Ntr); phosphoenolpyruvate-protein phosphotransferase PtsP 520230..522473 Rhodobacter sphaeroides ATCC 17029 4896575 YP_001042388.1 CDS Rsph17029_0500 NC_009049.1 522651 523832 D KEGG: rsp:RSP_1851 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-succinylhomoserine sulfhydrylase 522651..523832 Rhodobacter sphaeroides ATCC 17029 4897245 YP_001042389.1 CDS Rsph17029_0501 NC_009049.1 523928 525007 D similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 523928..525007 Rhodobacter sphaeroides ATCC 17029 4897468 YP_001042390.1 CDS Rsph17029_0502 NC_009049.1 525058 526506 D PFAM: cation transporter; KEGG: rsp:RSP_1853 potassium uptake transporter, transmembrane component, TrkH; cation transporter 525058..526506 Rhodobacter sphaeroides ATCC 17029 4898078 YP_001042391.1 CDS Rsph17029_0503 NC_009049.1 526549 528003 D PFAM: cation transporter; KEGG: rsp:RSP_1854 potassium uptake transporter, transmembrane component, TrkH; cation transporter 526549..528003 Rhodobacter sphaeroides ATCC 17029 4897758 YP_001042392.1 CDS Rsph17029_0504 NC_009049.1 528073 529854 R PFAM: Peptidoglycan-binding domain 1 protein; Sporulation domain protein; KEGG: rsp:RSP_1855 hypothetical protein; peptidoglycan binding domain-containing protein complement(528073..529854) Rhodobacter sphaeroides ATCC 17029 4897135 YP_001042393.1 CDS glyQ NC_009049.1 529979 530902 D glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 529979..530902 Rhodobacter sphaeroides ATCC 17029 4896987 YP_001042394.1 CDS Rsph17029_0506 NC_009049.1 530899 531369 D KEGG: rsp:RSP_1857 hypothetical protein; hypothetical protein 530899..531369 Rhodobacter sphaeroides ATCC 17029 4896896 YP_001042395.1 CDS glyS NC_009049.1 531373 533466 D glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 531373..533466 Rhodobacter sphaeroides ATCC 17029 4896570 YP_001042396.1 CDS Rsph17029_0508 NC_009049.1 533585 536131 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 533585..536131 Rhodobacter sphaeroides ATCC 17029 4896156 YP_001042397.1 CDS Rsph17029_0509 NC_009049.1 536349 537071 D PFAM: cell wall hydrolase, SleB; KEGG: rsp:RSP_1860 hypothetical protein; cell wall hydrolase SleB 536349..537071 Rhodobacter sphaeroides ATCC 17029 4895423 YP_001042398.1 CDS Rsph17029_0510 NC_009049.1 537171 538073 D PFAM: dihydroneopterin aldolase; KEGG: rsp:RSP_1861 probable dihydroneopterin aldolase; dihydroneopterin aldolase 537171..538073 Rhodobacter sphaeroides ATCC 17029 4895138 YP_001042399.1 CDS Rsph17029_0511 NC_009049.1 538119 539156 D KEGG: rsp:RSP_1862 dihydropteroate synthase, DhpS; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 538119..539156 Rhodobacter sphaeroides ATCC 17029 4897266 YP_001042400.1 CDS glmM NC_009049.1 539153 540496 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 539153..540496 Rhodobacter sphaeroides ATCC 17029 4895697 YP_001042401.1 CDS Rsph17029_0513 NC_009049.1 540595 540813 D KEGG: rsp:RSP_1864 hypothetical protein; hypothetical protein 540595..540813 Rhodobacter sphaeroides ATCC 17029 4895605 YP_001042402.1 CDS Rsph17029_0514 NC_009049.1 540886 541908 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(540886..541908) Rhodobacter sphaeroides ATCC 17029 4896282 YP_001042403.1 CDS Rsph17029_0515 NC_009049.1 542038 542493 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1866 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 542038..542493 Rhodobacter sphaeroides ATCC 17029 4896195 YP_001042404.1 CDS Rsph17029_0516 NC_009049.1 542490 542948 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1867 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 542490..542948 Rhodobacter sphaeroides ATCC 17029 4895615 YP_001042405.1 CDS Rsph17029_0517 NC_009049.1 543133 544260 D PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_1868 serine-pyruvate aminotransferase; class V aminotransferase 543133..544260 Rhodobacter sphaeroides ATCC 17029 4895591 YP_001042406.1 CDS Rsph17029_0518 NC_009049.1 544265 545464 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rsp:RSP_1869 2-octaprenyl-6-methoxyphenyl hydroxylase; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(544265..545464) Rhodobacter sphaeroides ATCC 17029 4895271 YP_001042407.1 CDS Rsph17029_0519 NC_009049.1 545516 545746 R KEGG: rsp:RSP_6022 hypothetical protein; hypothetical protein complement(545516..545746) Rhodobacter sphaeroides ATCC 17029 4895232 YP_001042408.1 CDS Rsph17029_0520 NC_009049.1 545827 546474 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_1870 predicted hydrolase; pyrimidine 5'-nucleotidase complement(545827..546474) Rhodobacter sphaeroides ATCC 17029 4896224 YP_001042409.1 CDS Rsph17029_0521 NC_009049.1 546590 547225 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1871 transcriptional regulator, GntR family; GntR family transcriptional regulator 546590..547225 Rhodobacter sphaeroides ATCC 17029 4897973 YP_001042410.1 CDS Rsph17029_0522 NC_009049.1 547233 549143 R PFAM: glycosyl transferase, family 2; General secretory system II, protein E domain protein; KEGG: rsp:RSP_1872 glycosyl transferase, family 2; general secretion pathway protein E complement(547233..549143) Rhodobacter sphaeroides ATCC 17029 4897692 YP_001042411.1 CDS Rsph17029_0523 NC_009049.1 549281 550063 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1873 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(549281..550063) Rhodobacter sphaeroides ATCC 17029 4897820 YP_001042412.1 CDS Rsph17029_0524 NC_009049.1 550245 551408 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(550245..551408) Rhodobacter sphaeroides ATCC 17029 4897556 YP_001042413.1 CDS Rsph17029_0525 NC_009049.1 551586 552044 D PFAM: GatB/Yqey domain protein; KEGG: rsp:RSP_1875 hypothetical protein; GatB/Yqey domain-containing protein 551586..552044 Rhodobacter sphaeroides ATCC 17029 4897343 YP_001042414.1 CDS Rsph17029_0526 NC_009049.1 552353 552883 R KEGG: rsp:RSP_1876 hypothetical protein; hypothetical protein complement(552353..552883) Rhodobacter sphaeroides ATCC 17029 4896304 YP_001042415.1 CDS Rsph17029_0527 NC_009049.1 552897 554597 R PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_1877 cytochrome c oxidase, aa3 type, subunit I; cytochrome-c oxidase complement(552897..554597) Rhodobacter sphaeroides ATCC 17029 4896659 YP_001042416.1 CDS lipB NC_009049.1 555012 555668 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(555012..555668) Rhodobacter sphaeroides ATCC 17029 4896766 YP_001042417.1 CDS Rsph17029_0529 NC_009049.1 555765 557324 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1880 hypothetical protein; peptidoglycan binding domain-containing protein 555765..557324 Rhodobacter sphaeroides ATCC 17029 4895177 YP_001042418.1 CDS Rsph17029_0530 NC_009049.1 557822 558925 D KEGG: rsp:RSP_1882 ABC polyamine/opine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 557822..558925 Rhodobacter sphaeroides ATCC 17029 4895899 YP_001042419.1 CDS Rsph17029_0531 NC_009049.1 558995 560071 D KEGG: rsp:RSP_1883 ABC polyamine/opine transporter, periplasmic substrate-binding protein; polyamine/opine ABC transporter substrate-binding protein 558995..560071 Rhodobacter sphaeroides ATCC 17029 4895435 YP_001042420.1 CDS Rsph17029_0532 NC_009049.1 560123 561397 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1884 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 560123..561397 Rhodobacter sphaeroides ATCC 17029 4898063 YP_001042421.1 CDS Rsph17029_0533 NC_009049.1 561476 562384 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_1886 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 561476..562384 Rhodobacter sphaeroides ATCC 17029 4898020 YP_001042422.1 CDS rpmG NC_009049.1 562564 562731 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 562564..562731 Rhodobacter sphaeroides ATCC 17029 4897163 YP_001042423.1 CDS Rsph17029_0535 NC_009049.1 562806 563291 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1888 possible acetyltransferase (GNAT) family; N-acetyltransferase GCN5 562806..563291 Rhodobacter sphaeroides ATCC 17029 4896569 YP_001042424.1 CDS Rsph17029_0536 NC_009049.1 563342 564082 R PFAM: protein of unknown function UPF0005; KEGG: rsp:RSP_1889 hypothetical protein; hypothetical protein complement(563342..564082) Rhodobacter sphaeroides ATCC 17029 4896674 YP_001042425.1 CDS Rsph17029_0537 NC_009049.1 564213 564443 R KEGG: rsp:RSP_6024 hypothetical protein; hypothetical protein complement(564213..564443) Rhodobacter sphaeroides ATCC 17029 4896088 YP_001042426.1 CDS Rsph17029_0538 NC_009049.1 564561 565496 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1890 transcriptional regulator, LysR family; LysR family transcriptional regulator 564561..565496 Rhodobacter sphaeroides ATCC 17029 4896503 YP_001042427.1 CDS Rsph17029_0539 NC_009049.1 565504 566463 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_1891 zinc-binding dehydrogenase; alcohol dehydrogenase complement(565504..566463) Rhodobacter sphaeroides ATCC 17029 4895475 YP_001042428.1 CDS Rsph17029_0540 NC_009049.1 566824 567186 D PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_1892 putative Cro/CI transcriptional regulator; XRE family transcriptional regulator 566824..567186 Rhodobacter sphaeroides ATCC 17029 4896694 YP_001042429.1 CDS Rsph17029_0541 NC_009049.1 567275 568075 D PFAM: inositol monophosphatase; KEGG: rsp:RSP_1893 inositol monophosphatase family protein; inositol monophosphatase 567275..568075 Rhodobacter sphaeroides ATCC 17029 4895309 YP_001042430.1 CDS Rsph17029_0542 NC_009049.1 568072 568341 D hypothetical protein 568072..568341 Rhodobacter sphaeroides ATCC 17029 4895454 YP_001042431.1 CDS Rsph17029_0543 NC_009049.1 568404 568913 D PFAM: cell wall hydrolase, SleB; KEGG: rsp:RSP_1894 hypothetical protein; cell wall hydrolase SleB 568404..568913 Rhodobacter sphaeroides ATCC 17029 4895169 YP_001042432.1 CDS Rsph17029_0544 NC_009049.1 569213 571576 D PFAM: MscS Mechanosensitive ion channel; KEGG: rsp:RSP_1895 small-conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 569213..571576 Rhodobacter sphaeroides ATCC 17029 4897369 YP_001042433.1 CDS Rsph17029_0545 NC_009049.1 571620 572906 R Catalyzes the deamination of guanine; guanine deaminase complement(571620..572906) Rhodobacter sphaeroides ATCC 17029 4897193 YP_001042434.1 CDS Rsph17029_0546 NC_009049.1 573038 574417 D TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: rsp:RSP_1897 Mg/Co/Ni transporter, MgtE; magnesium transporter 573038..574417 Rhodobacter sphaeroides ATCC 17029 4897050 YP_001042435.1 CDS Rsph17029_0547 NC_009049.1 574414 574968 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rsp:RSP_1898 putative 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 574414..574968 Rhodobacter sphaeroides ATCC 17029 4896838 YP_001042436.1 CDS Rsph17029_0548 NC_009049.1 574970 576280 R KEGG: rsp:RSP_1899 predicted ATPase; ATPase complement(574970..576280) Rhodobacter sphaeroides ATCC 17029 4897963 YP_001042437.1 CDS Rsph17029_0549 NC_009049.1 576296 576799 R PFAM: peptidase A24A, prepilin type IV; KEGG: rsp:RSP_1900 putative prepilin peptidase CpaA; peptidase A24A, prepilin type IV complement(576296..576799) Rhodobacter sphaeroides ATCC 17029 4895201 YP_001042438.1 CDS Rsph17029_0550 NC_009049.1 576802 577710 R KEGG: rsp:RSP_1901 hypothetical protein with TPR repeat; hypothetical protein complement(576802..577710) Rhodobacter sphaeroides ATCC 17029 4895101 YP_001042439.1 CDS Rsph17029_0551 NC_009049.1 577688 578254 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_1902 conserved hypothetical protein with TPR repeat; hypothetical protein complement(577688..578254) Rhodobacter sphaeroides ATCC 17029 4895353 YP_001042440.1 CDS Rsph17029_0552 NC_009049.1 578261 579241 R PFAM: type II secretion system protein; KEGG: rsp:RSP_1903 putative Flp pilus assembly protein TadC; type II secretion system protein complement(578261..579241) Rhodobacter sphaeroides ATCC 17029 4897582 YP_001042441.1 CDS Rsph17029_0553 NC_009049.1 579245 580213 R PFAM: type II secretion system protein; KEGG: rsp:RSP_1904 putative Flp pilus assembly protein TadB; type II secretion system protein complement(579245..580213) Rhodobacter sphaeroides ATCC 17029 4897444 YP_001042442.1 CDS Rsph17029_0554 NC_009049.1 580221 581678 R PFAM: type II secretion system protein E; KEGG: rsp:RSP_1905 putative Flp pilus assembly protein ATPase CpaF; type II secretion system protein E complement(580221..581678) Rhodobacter sphaeroides ATCC 17029 4897310 YP_001042443.1 CDS Rsph17029_0555 NC_009049.1 581699 582970 R KEGG: rsp:RSP_1907 putative Flp pilus assembly protein ATPase CpaE; response regulator receiver protein complement(581699..582970) Rhodobacter sphaeroides ATCC 17029 4896555 YP_001042444.1 CDS Rsph17029_0556 NC_009049.1 583317 583958 R PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1908 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein complement(583317..583958) Rhodobacter sphaeroides ATCC 17029 4896532 YP_001042445.1 CDS Rsph17029_0557 NC_009049.1 583964 585349 R PFAM: type II and III secretion system protein; transport-associated; KEGG: rsp:RSP_1909 outer membrane general secretion pathway protein, secretin; type II and III secretion system protein complement(583964..585349) Rhodobacter sphaeroides ATCC 17029 4897880 YP_001042446.1 CDS Rsph17029_0558 NC_009049.1 585602 586426 R KEGG: rsp:RSP_1910 putative Flp pilus assembly protein CpaB; putative Flp pilus assembly protein CpaB complement(585602..586426) Rhodobacter sphaeroides ATCC 17029 4897803 YP_001042447.1 CDS Rsph17029_0559 NC_009049.1 586493 586714 R KEGG: rsp:RSP_6219 hypothetical protein; hypothetical protein complement(586493..586714) Rhodobacter sphaeroides ATCC 17029 4896138 YP_001042448.1 CDS Rsph17029_0560 NC_009049.1 586888 587220 R KEGG: rsp:RSP_6025 hypothetical protein; hypothetical protein complement(586888..587220) Rhodobacter sphaeroides ATCC 17029 4895839 YP_001042449.1 CDS Rsph17029_0561 NC_009049.1 587480 588370 D PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1911 possible soluble lytic murein transglycosylase; lytic transglycosylase, catalytic 587480..588370 Rhodobacter sphaeroides ATCC 17029 4895443 YP_001042450.1 CDS Rsph17029_0562 NC_009049.1 588429 588719 R KEGG: rsp:RSP_1912 hypothetical protein; hypothetical protein complement(588429..588719) Rhodobacter sphaeroides ATCC 17029 4895069 YP_001042451.1 CDS Rsph17029_0563 NC_009049.1 588712 589341 R KEGG: rsp:RSP_1913 3-oxoadipate CoA-transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(588712..589341) Rhodobacter sphaeroides ATCC 17029 4895208 YP_001042452.1 CDS Rsph17029_0564 NC_009049.1 589356 590054 R KEGG: rsp:RSP_1914 3-ketoacid CoA transferase alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(589356..590054) Rhodobacter sphaeroides ATCC 17029 4895641 YP_001042453.1 CDS Rsph17029_0565 NC_009049.1 590598 591521 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1915 transcriptional regulator, LysR family; LysR family transcriptional regulator 590598..591521 Rhodobacter sphaeroides ATCC 17029 4895926 YP_001042454.1 CDS Rsph17029_0566 NC_009049.1 591660 592181 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_6026 putative acetyltransferase; N-acetyltransferase GCN5 complement(591660..592181) Rhodobacter sphaeroides ATCC 17029 4897002 YP_001042455.1 CDS Rsph17029_0567 NC_009049.1 592175 592774 R PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_1916 possible 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase complement(592175..592774) Rhodobacter sphaeroides ATCC 17029 4896687 YP_001042456.1 CDS Rsph17029_0568 NC_009049.1 592771 593289 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_1917 hypothetical protein; cupin complement(592771..593289) Rhodobacter sphaeroides ATCC 17029 4896606 YP_001042457.1 CDS Rsph17029_0569 NC_009049.1 593429 594406 D KEGG: rsp:RSP_1918 predicted alpha/beta hydrolase; alpha/beta hydrolase 593429..594406 Rhodobacter sphaeroides ATCC 17029 4896315 YP_001042458.1 CDS Rsph17029_0570 NC_009049.1 594434 594979 D KEGG: rsp:RSP_1919 hypothetical protein; hypothetical protein 594434..594979 Rhodobacter sphaeroides ATCC 17029 4896062 YP_001042459.1 CDS Rsph17029_0571 NC_009049.1 595024 595893 R TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rsp:RSP_1920 pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal kinase complement(595024..595893) Rhodobacter sphaeroides ATCC 17029 4895469 YP_001042460.1 CDS Rsph17029_0572 NC_009049.1 595890 596570 R PFAM: 3-alpha; MOSC domain containing protein; KEGG: rsp:RSP_1921 MOSC domain protein; MOSC domain-containing protein complement(595890..596570) Rhodobacter sphaeroides ATCC 17029 4895320 YP_001042461.1 CDS Rsph17029_0573 NC_009049.1 596962 598374 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_1922 transcriptional regulator, GntR family, with aminotransferase domain; GntR family transcriptional regulator 596962..598374 Rhodobacter sphaeroides ATCC 17029 4895162 YP_001042462.1 CDS Rsph17029_0574 NC_009049.1 598376 599362 R KEGG: rsp:RSP_1923 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(598376..599362) Rhodobacter sphaeroides ATCC 17029 4897552 YP_001042463.1 CDS Rsph17029_0575 NC_009049.1 599359 599916 R PFAM: BioY protein; KEGG: rsp:RSP_1924 BioY family protein; BioY protein complement(599359..599916) Rhodobacter sphaeroides ATCC 17029 4895414 YP_001042464.1 CDS Rsph17029_0576 NC_009049.1 600000 600668 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_1925 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(600000..600668) Rhodobacter sphaeroides ATCC 17029 4897255 YP_001042465.1 CDS Rsph17029_0577 NC_009049.1 601144 602139 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: rsp:RSP_1926 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A 601144..602139 Rhodobacter sphaeroides ATCC 17029 4897564 YP_001042466.1 CDS Rsph17029_0578 NC_009049.1 602220 603038 D PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_1927 hypothetical protein; hypothetical protein 602220..603038 Rhodobacter sphaeroides ATCC 17029 4897287 YP_001042467.1 CDS Rsph17029_0579 NC_009049.1 603353 604843 R unwinds double stranded DNA; replicative DNA helicase complement(603353..604843) Rhodobacter sphaeroides ATCC 17029 4895620 YP_001042468.1 CDS pyrE NC_009049.1 605112 605810 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(605112..605810) Rhodobacter sphaeroides ATCC 17029 4895354 YP_001042469.1 CDS Rsph17029_0581 NC_009049.1 605853 606893 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(605853..606893) Rhodobacter sphaeroides ATCC 17029 4897885 YP_001042470.1 CDS Rsph17029_0582 NC_009049.1 607038 607952 D PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_1931 probable ATPase, AAA family; ATPase 607038..607952 Rhodobacter sphaeroides ATCC 17029 4897762 YP_001042471.1 CDS Rsph17029_0583 NC_009049.1 608057 609253 D PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: rsp:RSP_1932 hypothetical protein; VWA containing CoxE family protein 608057..609253 Rhodobacter sphaeroides ATCC 17029 4898095 YP_001042472.1 CDS Rsph17029_0584 NC_009049.1 609383 609802 D KEGG: rsp:RSP_6241 hypothetical protein; hypothetical protein 609383..609802 Rhodobacter sphaeroides ATCC 17029 4896457 YP_001042473.1 CDS Rsph17029_0585 NC_009049.1 610017 612122 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1933 outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 610017..612122 Rhodobacter sphaeroides ATCC 17029 4897596 YP_001042474.1 CDS Rsph17029_0586 NC_009049.1 612238 613209 D PFAM: protein of unknown function DUF182; KEGG: sil:SPO2640 XdhC/CoxI family protein; hypothetical protein 612238..613209 Rhodobacter sphaeroides ATCC 17029 4896722 YP_001042475.1 CDS Rsph17029_0587 NC_009049.1 613209 614213 D PFAM: molybdopterin binding domain; KEGG: rsp:RSP_1936 molybdopterin biosynthesis protein; Fis family transcriptional regulator 613209..614213 Rhodobacter sphaeroides ATCC 17029 4896370 YP_001042476.1 CDS infC NC_009049.1 614285 614869 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(614285..614869) Rhodobacter sphaeroides ATCC 17029 4896736 YP_001042477.1 CDS Rsph17029_0589 NC_009049.1 614995 615630 D KEGG: rsp:RSP_1938 conserved hypothetical protein; hypothetical protein 614995..615630 Rhodobacter sphaeroides ATCC 17029 4897119 YP_001042478.1 CDS Rsph17029_0590 NC_009049.1 615745 616551 R PFAM: Oxidoreductase FAD-binding domain protein; KEGG: rsp:RSP_1939 NADPH-ferredoxin reductase; ferredoxin--NADP(+) reductase complement(615745..616551) Rhodobacter sphaeroides ATCC 17029 4896111 YP_001042479.1 CDS Rsph17029_0591 NC_009049.1 616614 617021 R KEGG: rsp:RSP_1940 hypothetical protein; hypothetical protein complement(616614..617021) Rhodobacter sphaeroides ATCC 17029 4895243 YP_001042480.1 CDS Rsph17029_0592 NC_009049.1 617018 617773 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(617018..617773) Rhodobacter sphaeroides ATCC 17029 4895700 YP_001042481.1 CDS Rsph17029_0593 NC_009049.1 617763 619433 R PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rsp:RSP_1942 sulfite/nitrite reductase hemoprotein subunit; nitrite/sulfite reductase hemoprotein beta subunit complement(617763..619433) Rhodobacter sphaeroides ATCC 17029 4897158 YP_001042482.1 CDS Rsph17029_0594 NC_009049.1 619460 619765 R KEGG: rsp:RSP_1943 hypothetical protein; hypothetical protein complement(619460..619765) Rhodobacter sphaeroides ATCC 17029 4897456 YP_001042483.1 CDS Rsph17029_0595 NC_009049.1 619762 620526 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_1944 uroporphiryn-III C-methyltransferase/siroheme synthase; uroporphyrin-III C-methyltransferase complement(619762..620526) Rhodobacter sphaeroides ATCC 17029 4896140 YP_001042484.1 CDS Rsph17029_0596 NC_009049.1 620669 621130 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1945 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 620669..621130 Rhodobacter sphaeroides ATCC 17029 4897189 YP_001042485.1 CDS Rsph17029_0597 NC_009049.1 621301 622482 R PFAM: cytochrome P450; KEGG: rsp:RSP_1946 cytochrome P450 hydroxylase; cytochrome P450 complement(621301..622482) Rhodobacter sphaeroides ATCC 17029 4896979 YP_001042486.1 CDS Rsph17029_0598 NC_009049.1 622811 623548 R PFAM: triosephosphate isomerase; KEGG: rsp:RSP_1947 triosephosphate isomerase; Triose-phosphate isomerase complement(622811..623548) Rhodobacter sphaeroides ATCC 17029 4897205 YP_001042487.1 CDS Rsph17029_0599 NC_009049.1 623660 624016 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_1948 protein of unknown function, HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein complement(623660..624016) Rhodobacter sphaeroides ATCC 17029 4896883 YP_001042488.1 CDS Rsph17029_0600 NC_009049.1 624100 624462 R PFAM: protein of unknown function DUF59; KEGG: rsp:RSP_1949 hypothetical protein; hypothetical protein complement(624100..624462) Rhodobacter sphaeroides ATCC 17029 4896941 YP_001042489.1 CDS Rsph17029_0601 NC_009049.1 624750 625553 D KEGG: rsp:RSP_1950 hypothetical protein; hypothetical protein 624750..625553 Rhodobacter sphaeroides ATCC 17029 4895368 YP_001042490.1 CDS Rsph17029_0602 NC_009049.1 625823 626173 R PFAM: protein of unknown function DUF982; KEGG: rsp:RSP_1951 hypothetical protein; hypothetical protein complement(625823..626173) Rhodobacter sphaeroides ATCC 17029 4895796 YP_001042491.1 CDS Rsph17029_0603 NC_009049.1 626207 626413 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_1952 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein complement(626207..626413) Rhodobacter sphaeroides ATCC 17029 4896526 YP_001042492.1 CDS Rsph17029_0604 NC_009049.1 627031 627771 R PFAM: cyclic nucleotide-binding; KEGG: rsp:RSP_1953 transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding protein complement(627031..627771) Rhodobacter sphaeroides ATCC 17029 4897911 YP_001042493.1 CDS Rsph17029_0605 NC_009049.1 627898 628164 D KEGG: rsp:RSP_1954 hypothetical protein; hypothetical protein 627898..628164 Rhodobacter sphaeroides ATCC 17029 4895815 YP_001042494.1 CDS Rsph17029_0606 NC_009049.1 628161 629009 D KEGG: rsp:RSP_1955 hypothetical protein; hypothetical protein 628161..629009 Rhodobacter sphaeroides ATCC 17029 4897162 YP_001042495.1 CDS Rsph17029_0607 NC_009049.1 629133 629858 D KEGG: rsp:RSP_1956 hypothetical protein; hypothetical protein 629133..629858 Rhodobacter sphaeroides ATCC 17029 4895517 YP_001042496.1 CDS Rsph17029_0608 NC_009049.1 629865 630176 R KEGG: rsp:RSP_1957 hypothetical protein; hypothetical protein complement(629865..630176) Rhodobacter sphaeroides ATCC 17029 4897127 YP_001042497.1 CDS Rsph17029_0609 NC_009049.1 630173 630877 R hypothetical protein complement(630173..630877) Rhodobacter sphaeroides ATCC 17029 4895663 YP_001042498.1 CDS Rsph17029_0612 NC_009049.1 631862 632167 D hypothetical protein 631862..632167 Rhodobacter sphaeroides ATCC 17029 4895889 YP_001042499.1 CDS Rsph17029_0613 NC_009049.1 632278 632751 D KEGG: rsp:RSP_1962 hypothetical protein; hypothetical protein 632278..632751 Rhodobacter sphaeroides ATCC 17029 4895494 YP_001042500.1 CDS Rsph17029_0614 NC_009049.1 633114 633344 R KEGG: rsp:RSP_1963 hypothetical protein; hypothetical protein complement(633114..633344) Rhodobacter sphaeroides ATCC 17029 4896159 YP_001042501.1 CDS Rsph17029_0615 NC_009049.1 633617 633934 D KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA 633617..633934 Rhodobacter sphaeroides ATCC 17029 4895289 YP_001042502.1 CDS Rsph17029_0617 NC_009049.1 635014 635415 D hypothetical protein 635014..635415 Rhodobacter sphaeroides ATCC 17029 4895895 YP_001042503.1 CDS Rsph17029_0618 NC_009049.1 635408 636598 D PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_1965 putative membrane fusion protein family member; secretion protein HlyD family protein 635408..636598 Rhodobacter sphaeroides ATCC 17029 4895100 YP_001042504.1 CDS Rsph17029_0619 NC_009049.1 636832 638001 D PFAM: phage integrase family protein; KEGG: nwi:Nwi_0275 phage integrase; phage integrase family protein 636832..638001 Rhodobacter sphaeroides ATCC 17029 4895238 YP_001042505.1 CDS Rsph17029_0620 NC_009049.1 638147 638686 D hypothetical protein 638147..638686 Rhodobacter sphaeroides ATCC 17029 4895344 YP_001042506.1 CDS Rsph17029_0621 NC_009049.1 639256 640191 R PFAM: glycoside hydrolase, family 16; glycoside hydrolase complement(639256..640191) Rhodobacter sphaeroides ATCC 17029 4895420 YP_001042507.1 CDS Rsph17029_0622 NC_009049.1 640205 642115 R hypothetical protein complement(640205..642115) Rhodobacter sphaeroides ATCC 17029 4895579 YP_001042508.1 CDS Rsph17029_0623 NC_009049.1 642108 642773 R PFAM: Collagen triple helix repeat; triple helix repeat-containing collagen complement(642108..642773) Rhodobacter sphaeroides ATCC 17029 4895783 YP_001042509.1 CDS Rsph17029_0624 NC_009049.1 642773 643204 R hypothetical protein complement(642773..643204) Rhodobacter sphaeroides ATCC 17029 4896097 YP_001042510.1 CDS Rsph17029_0625 NC_009049.1 643763 644392 R KEGG: bqu:BQ11590 phage related lysozyme; Phage-related lysozyme (muraminidase)-like complement(643763..644392) Rhodobacter sphaeroides ATCC 17029 4896125 YP_001042511.1 CDS Rsph17029_0626 NC_009049.1 644454 644765 R hypothetical protein complement(644454..644765) Rhodobacter sphaeroides ATCC 17029 4896281 YP_001042512.1 CDS Rsph17029_0627 NC_009049.1 644767 645222 R hypothetical protein complement(644767..645222) Rhodobacter sphaeroides ATCC 17029 4896598 YP_001042513.1 CDS Rsph17029_0628 NC_009049.1 645219 645578 R hypothetical protein complement(645219..645578) Rhodobacter sphaeroides ATCC 17029 4896908 YP_001042514.1 CDS Rsph17029_0629 NC_009049.1 645578 646090 R KEGG: rsp:RSP_3631 hypothetical protein; hypothetical protein complement(645578..646090) Rhodobacter sphaeroides ATCC 17029 4896989 YP_001042515.1 CDS Rsph17029_0630 NC_009049.1 646087 649848 R KEGG: rsp:RSP_2990 hypothetical protein; hypothetical protein complement(646087..649848) Rhodobacter sphaeroides ATCC 17029 4897482 YP_001042516.1 CDS Rsph17029_0631 NC_009049.1 649853 650266 R KEGG: aba:Acid345_3157 hypothetical protein; hypothetical protein complement(649853..650266) Rhodobacter sphaeroides ATCC 17029 4897993 YP_001042517.1 CDS Rsph17029_0632 NC_009049.1 650263 650877 R hypothetical protein complement(650263..650877) Rhodobacter sphaeroides ATCC 17029 4896582 YP_001042518.1 CDS Rsph17029_0633 NC_009049.1 650874 651479 R hypothetical protein complement(650874..651479) Rhodobacter sphaeroides ATCC 17029 4897595 YP_001042519.1 CDS Rsph17029_0634 NC_009049.1 651480 653555 R KEGG: rsp:RSP_2059 potential phage tail tape measure protein; hypothetical protein complement(651480..653555) Rhodobacter sphaeroides ATCC 17029 4897149 YP_001042520.1 CDS Rsph17029_0635 NC_009049.1 653545 653787 R hypothetical protein complement(653545..653787) Rhodobacter sphaeroides ATCC 17029 4897232 YP_001042521.1 CDS Rsph17029_0636 NC_009049.1 653877 654185 R hypothetical protein complement(653877..654185) Rhodobacter sphaeroides ATCC 17029 4897204 YP_001042522.1 CDS Rsph17029_0637 NC_009049.1 654215 654643 R hypothetical protein complement(654215..654643) Rhodobacter sphaeroides ATCC 17029 4897484 YP_001042523.1 CDS Rsph17029_0638 NC_009049.1 654633 655025 R KEGG: rsp:RSP_6012 hypothetical protein; hypothetical protein complement(654633..655025) Rhodobacter sphaeroides ATCC 17029 4895660 YP_001042524.1 CDS Rsph17029_0639 NC_009049.1 655208 655672 R TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: rsp:RSP_1640 hypothetical protein; HK97 family phage protein complement(655208..655672) Rhodobacter sphaeroides ATCC 17029 4897252 YP_001042525.1 CDS Rsph17029_0640 NC_009049.1 655669 655992 R KEGG: rsp:RSP_2066 hypothetical protein; hypothetical protein complement(655669..655992) Rhodobacter sphaeroides ATCC 17029 4897430 YP_001042526.1 CDS Rsph17029_0641 NC_009049.1 655992 656528 R KEGG: sit:TM1040_1667 phage conserved hypothetical protein, phiE125 gp8; hypothetical protein complement(655992..656528) Rhodobacter sphaeroides ATCC 17029 4896496 YP_001042527.1 CDS Rsph17029_0642 NC_009049.1 656750 657961 R KEGG: sgl:SG0722 phage major head protein; phage major head protein complement(656750..657961) Rhodobacter sphaeroides ATCC 17029 4897247 YP_001042528.1 CDS Rsph17029_0643 NC_009049.1 657986 658834 R PFAM: peptidase S14, ClpP; KEGG: rsp:RSP_2068 putative ClpP-like protease; peptidase S14, ClpP complement(657986..658834) Rhodobacter sphaeroides ATCC 17029 4897293 YP_001042529.1 CDS Rsph17029_0644 NC_009049.1 658831 660036 R TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: pde:Pden_0989 phage portal protein, HK97 family; HK97 family phage portal protein complement(658831..660036) Rhodobacter sphaeroides ATCC 17029 4897021 YP_001042530.1 CDS Rsph17029_0645 NC_009049.1 660036 661787 R PFAM: phage Terminase; KEGG: son:SO2967 hypothetical phage terminase large subunit; phage terminase complement(660036..661787) Rhodobacter sphaeroides ATCC 17029 4895070 YP_001042531.1 CDS Rsph17029_0646 NC_009049.1 661792 662277 R TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; KEGG: dvu:DVU1504 terminase, small subunit; P27 family phage terminase small subunit complement(661792..662277) Rhodobacter sphaeroides ATCC 17029 4895211 YP_001042532.1 CDS Rsph17029_0647 NC_009049.1 662365 662586 D hypothetical protein 662365..662586 Rhodobacter sphaeroides ATCC 17029 4897709 YP_001042533.1 CDS Rsph17029_0648 NC_009049.1 662633 662851 D hypothetical protein 662633..662851 Rhodobacter sphaeroides ATCC 17029 4897019 YP_001042534.1 CDS Rsph17029_0649 NC_009049.1 662920 663087 D hypothetical protein 662920..663087 Rhodobacter sphaeroides ATCC 17029 4897916 YP_001042535.1 CDS Rsph17029_0650 NC_009049.1 663084 663275 D XRE family transcriptional regulator 663084..663275 Rhodobacter sphaeroides ATCC 17029 4897890 YP_001042536.1 CDS Rsph17029_0651 NC_009049.1 663272 663949 D hypothetical protein 663272..663949 Rhodobacter sphaeroides ATCC 17029 4897942 YP_001042537.1 CDS Rsph17029_0652 NC_009049.1 663946 664152 R KEGG: pde:Pden_2067 hypothetical protein; hypothetical protein complement(663946..664152) Rhodobacter sphaeroides ATCC 17029 4896965 YP_001042538.1 CDS Rsph17029_0653 NC_009049.1 664137 665516 R PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; KEGG: hch:HCH_05682 DNA modification methylase; nuclease complement(664137..665516) Rhodobacter sphaeroides ATCC 17029 4896887 YP_001042539.1 CDS Rsph17029_0654 NC_009049.1 665674 666009 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: hch:HCH_10016 restriction endonuclease; HNH endonuclease complement(665674..666009) Rhodobacter sphaeroides ATCC 17029 4897417 YP_001042540.1 CDS Rsph17029_0655 NC_009049.1 665979 666356 R KEGG: hch:HCH_02910 hypothetical protein; hypothetical protein complement(665979..666356) Rhodobacter sphaeroides ATCC 17029 4897199 YP_001042541.1 CDS Rsph17029_0656 NC_009049.1 666484 666825 R hypothetical protein complement(666484..666825) Rhodobacter sphaeroides ATCC 17029 4895897 YP_001042542.1 CDS Rsph17029_0657 NC_009049.1 666825 667424 R hypothetical protein complement(666825..667424) Rhodobacter sphaeroides ATCC 17029 4896149 YP_001042543.1 CDS Rsph17029_0658 NC_009049.1 667424 667987 R hypothetical protein complement(667424..667987) Rhodobacter sphaeroides ATCC 17029 4897606 YP_001042544.1 CDS Rsph17029_0659 NC_009049.1 667984 668715 R PFAM: protein of unknown function DUF1376; KEGG: mlo:mll2129 hypothetical protein; hypothetical protein complement(667984..668715) Rhodobacter sphaeroides ATCC 17029 4897228 YP_001042545.1 CDS Rsph17029_0660 NC_009049.1 668712 669320 R PFAM: MT-A70 family protein; KEGG: sit:TM1040_1679 MT-A70; MT-A70 family protein complement(668712..669320) Rhodobacter sphaeroides ATCC 17029 4897328 YP_001042546.1 CDS Rsph17029_0661 NC_009049.1 669317 669925 R KEGG: rsp:RSP_3775 hypothetical protein; hypothetical protein complement(669317..669925) Rhodobacter sphaeroides ATCC 17029 4897074 YP_001042547.1 CDS Rsph17029_0662 NC_009049.1 669925 670359 R PFAM: endodeoxyribonuclease RusA; KEGG: nar:Saro_3008 endodeoxyribonuclease RusA; endodeoxyribonuclease RusA complement(669925..670359) Rhodobacter sphaeroides ATCC 17029 4897030 YP_001042548.1 CDS Rsph17029_0663 NC_009049.1 670363 670893 R hypothetical protein complement(670363..670893) Rhodobacter sphaeroides ATCC 17029 4897346 YP_001042549.1 CDS Rsph17029_0664 NC_009049.1 671778 672125 D SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 671778..672125 Rhodobacter sphaeroides ATCC 17029 4896802 YP_001042550.1 CDS Rsph17029_0665 NC_009049.1 672550 673890 D PFAM: C-5 cytosine-specific DNA methylase; KEGG: sgl:SG0727 phage methyltransferase; C-5 cytosine-specific DNA methylase 672550..673890 Rhodobacter sphaeroides ATCC 17029 4897884 YP_001042551.1 CDS Rsph17029_0666 NC_009049.1 674053 675276 D KEGG: gox:GOX2479 hypothetical protein; hypothetical protein 674053..675276 Rhodobacter sphaeroides ATCC 17029 4897921 YP_001042552.1 CDS Rsph17029_0667 NC_009049.1 675276 676211 D KEGG: mes:Meso_1188 hypothetical protein; hypothetical protein 675276..676211 Rhodobacter sphaeroides ATCC 17029 4897836 YP_001042553.1 CDS Rsph17029_0668 NC_009049.1 676626 677741 D KEGG: nfa:nfa14870 hypothetical protein; hypothetical protein 676626..677741 Rhodobacter sphaeroides ATCC 17029 4896009 YP_001042554.1 CDS Rsph17029_0669 NC_009049.1 677738 677989 D hypothetical protein 677738..677989 Rhodobacter sphaeroides ATCC 17029 4895251 YP_001042555.1 CDS Rsph17029_0670 NC_009049.1 677986 678504 D PFAM: Arc domain protein DNA binding domain protein; Arc domain-containing protein 677986..678504 Rhodobacter sphaeroides ATCC 17029 4897515 YP_001042556.1 CDS Rsph17029_0671 NC_009049.1 678497 679057 D PFAM: ribonuclease H; ribonuclease H 678497..679057 Rhodobacter sphaeroides ATCC 17029 4897140 YP_001042557.1 CDS Rsph17029_0672 NC_009049.1 679240 679572 D hypothetical protein 679240..679572 Rhodobacter sphaeroides ATCC 17029 4895063 YP_001042558.1 CDS Rsph17029_0673 NC_009049.1 679572 679886 D hypothetical protein 679572..679886 Rhodobacter sphaeroides ATCC 17029 4895066 YP_001042559.1 CDS Rsph17029_0674 NC_009049.1 680004 680297 D hypothetical protein 680004..680297 Rhodobacter sphaeroides ATCC 17029 4896730 YP_001042560.1 CDS Rsph17029_0675 NC_009049.1 680309 680599 D hypothetical protein 680309..680599 Rhodobacter sphaeroides ATCC 17029 4897195 YP_001042561.1 CDS Rsph17029_0676 NC_009049.1 680790 681881 D PFAM: phage integrase family protein; KEGG: rsp:RSP_1968 possible integrase/recombinase; phage integrase family protein 680790..681881 Rhodobacter sphaeroides ATCC 17029 4897061 YP_001042562.1 CDS Rsph17029_0677 NC_009049.1 682128 683174 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 682128..683174 Rhodobacter sphaeroides ATCC 17029 4897876 YP_001042563.1 CDS Rsph17029_0678 NC_009049.1 683171 683761 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rsp:RSP_1970 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 683171..683761 Rhodobacter sphaeroides ATCC 17029 4897180 YP_001042564.1 CDS Rsph17029_0679 NC_009049.1 683858 685015 D TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: rsp:RSP_1971 ribonuclease D; ribonuclease D 683858..685015 Rhodobacter sphaeroides ATCC 17029 4896540 YP_001042565.1 CDS Rsph17029_0680 NC_009049.1 685053 685505 R KEGG: rsp:RSP_1972 hypothetical protein; hypothetical protein complement(685053..685505) Rhodobacter sphaeroides ATCC 17029 4895084 YP_001042566.1 CDS Rsph17029_0681 NC_009049.1 685635 686063 D PFAM: Fe-S metabolism associated SufE; KEGG: rsp:RSP_1973 probable SufE protein; Fe-S metabolism associated SufE 685635..686063 Rhodobacter sphaeroides ATCC 17029 4897749 YP_001042567.1 CDS Rsph17029_0682 NC_009049.1 686086 686433 R PFAM: protein of unknown function DUF427; KEGG: rsp:RSP_1974 hypothetical protein; hypothetical protein complement(686086..686433) Rhodobacter sphaeroides ATCC 17029 4895090 YP_001042568.1 CDS Rsph17029_0683 NC_009049.1 686494 688290 R PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_1975 aminopeptidase P; peptidase M24 complement(686494..688290) Rhodobacter sphaeroides ATCC 17029 4895092 YP_001042569.1 CDS Rsph17029_0684 NC_009049.1 688290 690149 R KEGG: rsp:RSP_1976 aerobic cobalt chelatase, CobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A; cobaltochelatase complement(688290..690149) Rhodobacter sphaeroides ATCC 17029 4895093 YP_001042570.1 CDS Rsph17029_0685 NC_009049.1 690201 690530 R KEGG: rsp:RSP_6027 hypothetical protein; hypothetical protein complement(690201..690530) Rhodobacter sphaeroides ATCC 17029 4895096 YP_001042571.1 CDS Rsph17029_0686 NC_009049.1 690532 690861 R KEGG: rsp:RSP_6028 hypothetical protein; hypothetical protein complement(690532..690861) Rhodobacter sphaeroides ATCC 17029 4895122 YP_001042572.1 CDS Rsph17029_0687 NC_009049.1 690858 691952 R KEGG: rsp:RSP_1977 cobalt chelatase, CobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; cobalt chelatase small subunit complement(690858..691952) Rhodobacter sphaeroides ATCC 17029 4895132 YP_001042573.1 CDS Rsph17029_0688 NC_009049.1 691998 692633 R PFAM: heat shock protein DnaJ domain protein; KEGG: rsp:RSP_1978 molecular chaperone, DnaJ family; heat shock protein DnaJ domain-containing protein complement(691998..692633) Rhodobacter sphaeroides ATCC 17029 4895173 YP_001042574.1 CDS Rsph17029_0689 NC_009049.1 692708 692965 D PFAM: BolA family protein; KEGG: rsp:RSP_1979 stress induced morphogen, BolA; BolA family protein 692708..692965 Rhodobacter sphaeroides ATCC 17029 4895152 YP_001042575.1 CDS Rsph17029_0690 NC_009049.1 693074 695233 R catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G complement(693074..695233) Rhodobacter sphaeroides ATCC 17029 4895216 YP_001042576.1 CDS Rsph17029_0691 NC_009049.1 695333 696697 R PFAM: DNA photolyase domain protein; KEGG: rsp:RSP_1981 deoxyribodipyrimidine photolyase; DNA photolyase domain-containing protein complement(695333..696697) Rhodobacter sphaeroides ATCC 17029 4895210 YP_001042577.1 CDS pepN NC_009049.1 697052 699700 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: rsp:RSP_1982 aminopeptidase N; aminopeptidase N 697052..699700 Rhodobacter sphaeroides ATCC 17029 4895247 YP_001042578.1 CDS Rsph17029_0693 NC_009049.1 699807 700718 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_1983 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 699807..700718 Rhodobacter sphaeroides ATCC 17029 4895261 YP_001042579.1 CDS Rsph17029_0694 NC_009049.1 700948 702051 D catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; histidinol-phosphate aminotransferase 700948..702051 Rhodobacter sphaeroides ATCC 17029 4895256 YP_001042580.1 CDS Rsph17029_0695 NC_009049.1 702066 702566 R KEGG: rsp:RSP_1985 hypothetical protein; hypothetical protein complement(702066..702566) Rhodobacter sphaeroides ATCC 17029 4895252 YP_001042581.1 CDS gatB NC_009049.1 702665 704176 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(702665..704176) Rhodobacter sphaeroides ATCC 17029 4895312 YP_001042582.1 CDS Rsph17029_0697 NC_009049.1 704345 704941 D KEGG: rsp:RSP_1987 hypothetical protein; hypothetical protein 704345..704941 Rhodobacter sphaeroides ATCC 17029 4895304 YP_001042583.1 CDS Rsph17029_0698 NC_009049.1 704945 705289 R KEGG: rsp:RSP_1988 hypothetical protein; hypothetical protein complement(704945..705289) Rhodobacter sphaeroides ATCC 17029 4895265 YP_001042584.1 CDS valS NC_009049.1 705356 708319 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(705356..708319) Rhodobacter sphaeroides ATCC 17029 4895341 YP_001042585.1 CDS Rsph17029_0700 NC_009049.1 708438 708869 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_1990 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(708438..708869) Rhodobacter sphaeroides ATCC 17029 4895337 YP_001042586.1 CDS Rsph17029_0701 NC_009049.1 709089 710234 D PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_1991 putative ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 709089..710234 Rhodobacter sphaeroides ATCC 17029 4895418 YP_001042587.1 CDS Rsph17029_0702 NC_009049.1 710391 711494 D KEGG: rsp:RSP_1992 hypothetical protein; hypothetical protein 710391..711494 Rhodobacter sphaeroides ATCC 17029 4895404 YP_001042588.1 CDS Rsph17029_0703 NC_009049.1 711512 711988 R TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_1993 hypothetical protein; hypothetical protein complement(711512..711988) Rhodobacter sphaeroides ATCC 17029 4895372 YP_001042589.1 CDS Rsph17029_0704 NC_009049.1 712321 713607 R KEGG: rsp:RSP_1994 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(712321..713607) Rhodobacter sphaeroides ATCC 17029 4895366 YP_001042590.1 CDS gltX NC_009049.1 713714 715129 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(713714..715129) Rhodobacter sphaeroides ATCC 17029 4895440 YP_001042591.1 CDS Rsph17029_0706 NC_009049.1 715263 717317 D PFAM: ComEC/Rec2-related protein; KEGG: rsp:RSP_1996 putative competence protein; ComEC/Rec2-like protein 715263..717317 Rhodobacter sphaeroides ATCC 17029 4895495 YP_001042592.1 CDS Rsph17029_0707 NC_009049.1 717373 718056 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(717373..718056) Rhodobacter sphaeroides ATCC 17029 4895588 YP_001042593.1 CDS Rsph17029_0708 NC_009049.1 718116 719300 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rsp:RSP_1998 molybdenum cofactor biosynthesis protein A; molybdenum cofactor synthesis domain-containing protein complement(718116..719300) Rhodobacter sphaeroides ATCC 17029 4895566 YP_001042594.1 CDS moaC NC_009049.1 719297 719776 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(719297..719776) Rhodobacter sphaeroides ATCC 17029 4895521 YP_001042595.1 CDS trpC NC_009049.1 719776 720588 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase complement(719776..720588) Rhodobacter sphaeroides ATCC 17029 4895590 YP_001042596.1 CDS trpD NC_009049.1 720619 721635 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(720619..721635) Rhodobacter sphaeroides ATCC 17029 4895618 YP_001042597.1 CDS Rsph17029_0712 NC_009049.1 721632 722219 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(721632..722219) Rhodobacter sphaeroides ATCC 17029 4895589 YP_001042598.1 CDS Rsph17029_0713 NC_009049.1 722398 723831 D PFAM: protein of unknown function DUF610, YibQ; KEGG: rsp:RSP_2003 YibQ protein; hypothetical protein 722398..723831 Rhodobacter sphaeroides ATCC 17029 4895642 YP_001042599.1 CDS Rsph17029_0714 NC_009049.1 723995 725506 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(723995..725506) Rhodobacter sphaeroides ATCC 17029 4895644 YP_001042600.1 CDS Rsph17029_0715 NC_009049.1 725516 727381 R KEGG: rsp:RSP_2005 possible peptidyl-prolyl cis-trans isomerse; putative peptidyl-prolyl cis-trans isomerse complement(725516..727381) Rhodobacter sphaeroides ATCC 17029 4895638 YP_001042601.1 CDS Rsph17029_0716 NC_009049.1 727579 729561 D PFAM: AsmA family protein; KEGG: rsp:RSP_2006 hypothetical protein; AsmA family protein 727579..729561 Rhodobacter sphaeroides ATCC 17029 4895622 YP_001042602.1 CDS Rsph17029_0717 NC_009049.1 729743 730366 R PFAM: GcrA cell cycle regulator; KEGG: rsp:RSP_2007 conservd hypothetical protein; GcrA cell cycle regulator complement(729743..730366) Rhodobacter sphaeroides ATCC 17029 4895716 YP_001042603.1 CDS argD NC_009049.1 730952 732133 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 730952..732133 Rhodobacter sphaeroides ATCC 17029 4895701 YP_001042604.1 CDS Rsph17029_0719 NC_009049.1 732247 733173 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 732247..733173 Rhodobacter sphaeroides ATCC 17029 4895693 YP_001042605.1 CDS Rsph17029_0720 NC_009049.1 733397 733603 R KEGG: rsp:RSP_2010 hypothetical protein; hypothetical protein complement(733397..733603) Rhodobacter sphaeroides ATCC 17029 4895686 YP_001042606.1 CDS Rsph17029_0721 NC_009049.1 733781 734275 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rsp:RSP_2011 putative transcription elongation factor; GreA/GreB family elongation factor complement(733781..734275) Rhodobacter sphaeroides ATCC 17029 4895744 YP_001042607.1 CDS Rsph17029_0722 NC_009049.1 734301 734741 R PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2012 NUDIX hydrolase, MutT; NUDIX hydrolase complement(734301..734741) Rhodobacter sphaeroides ATCC 17029 4895742 YP_001042608.1 CDS Rsph17029_0723 NC_009049.1 735245 737671 R KEGG: rsp:RSP_2013 DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB complement(735245..737671) Rhodobacter sphaeroides ATCC 17029 4895753 YP_001042609.1 CDS Rsph17029_0724 NC_009049.1 737717 738430 R KEGG: rsp:RSP_2014 hypothetical protein; hypothetical protein complement(737717..738430) Rhodobacter sphaeroides ATCC 17029 4895739 YP_001042610.1 CDS Rsph17029_0725 NC_009049.1 738567 739538 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 738567..739538 Rhodobacter sphaeroides ATCC 17029 4895720 YP_001042611.1 CDS rpmB NC_009049.1 739752 740042 D required for 70S ribosome assembly; 50S ribosomal protein L28 739752..740042 Rhodobacter sphaeroides ATCC 17029 4895773 YP_001042612.1 CDS Rsph17029_0727 NC_009049.1 740170 740577 D KEGG: rsp:RSP_6029 hypothetical protein; hypothetical protein 740170..740577 Rhodobacter sphaeroides ATCC 17029 4895763 YP_001042613.1 CDS Rsph17029_0728 NC_009049.1 740607 741089 D PFAM: protein of unknown function DUF461; KEGG: rsp:RSP_2017 hypothetical protein; hypothetical protein 740607..741089 Rhodobacter sphaeroides ATCC 17029 4895777 YP_001042614.1 CDS Rsph17029_0729 NC_009049.1 741129 741440 R KEGG: rsp:RSP_2018 hypothetical protein; hypothetical protein complement(741129..741440) Rhodobacter sphaeroides ATCC 17029 4895761 YP_001042615.1 CDS Rsph17029_0730 NC_009049.1 741648 742100 R KEGG: rsp:RSP_2019 hypothetical protein; hypothetical protein complement(741648..742100) Rhodobacter sphaeroides ATCC 17029 4895757 YP_001042616.1 CDS Rsph17029_0731 NC_009049.1 742416 742928 R KEGG: rsp:RSP_2020 DHC, diheme cytochrome c; diheme cytochrome C complement(742416..742928) Rhodobacter sphaeroides ATCC 17029 4895832 YP_001042617.1 CDS Rsph17029_0732 NC_009049.1 742925 743329 R PFAM: cytochrome c, monohaem; KEGG: rsp:RSP_2021 mono-heme class I cytochrome c; cytochrome c, monoheme complement(742925..743329) Rhodobacter sphaeroides ATCC 17029 4895808 YP_001042618.1 CDS Rsph17029_0733 NC_009049.1 743333 744424 R PFAM: cytochrome B561; KEGG: rsp:RSP_2022 cytochrome b/diheme cytochrome c hybrid protein; cytochrome B561 complement(743333..744424) Rhodobacter sphaeroides ATCC 17029 4895800 YP_001042619.1 CDS Rsph17029_0734 NC_009049.1 744719 745198 R KEGG: rsp:RSP_2023 hypothetical protein; hypothetical protein complement(744719..745198) Rhodobacter sphaeroides ATCC 17029 4895810 YP_001042620.1 CDS Rsph17029_0735 NC_009049.1 745521 745727 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_2024 cold shock protein CspA; cold-shock DNA-binding domain-containing protein 745521..745727 Rhodobacter sphaeroides ATCC 17029 4895793 YP_001042621.1 CDS Rsph17029_0736 NC_009049.1 745777 746139 R KEGG: rsp:RSP_2025 hypothetical protein; hypothetical protein complement(745777..746139) Rhodobacter sphaeroides ATCC 17029 4895782 YP_001042622.1 CDS Rsph17029_0737 NC_009049.1 746181 747158 D SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rsp:RSP_2026 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 746181..747158 Rhodobacter sphaeroides ATCC 17029 4895850 YP_001042623.1 CDS Rsph17029_0738 NC_009049.1 747461 748351 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2027 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(747461..748351) Rhodobacter sphaeroides ATCC 17029 4895837 YP_001042624.1 CDS Rsph17029_0739 NC_009049.1 748449 748772 D KEGG: rsp:RSP_2028 hypothetical protein; hypothetical protein 748449..748772 Rhodobacter sphaeroides ATCC 17029 4895869 YP_001042625.1 CDS Rsph17029_0740 NC_009049.1 748769 749548 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2029 short chain dehydrogenase; short chain dehydrogenase 748769..749548 Rhodobacter sphaeroides ATCC 17029 4895871 YP_001042626.1 CDS Rsph17029_0741 NC_009049.1 749629 750699 R PFAM: HWE histidine kinase; KEGG: rsp:RSP_2030 putative sensor histidine kinase; signal transduction histidine kinase complement(749629..750699) Rhodobacter sphaeroides ATCC 17029 4895864 YP_001042627.1 CDS Rsph17029_0742 NC_009049.1 751258 751662 D KEGG: rsp:RSP_2032 putative hypothetical Gifsy-1 prophage protein; Gifsy-1 prophage protein 751258..751662 Rhodobacter sphaeroides ATCC 17029 4895859 YP_001042628.1 CDS Rsph17029_0743 NC_009049.1 751683 751961 D KEGG: rsp:RSP_2033 hypothetical protein; hypothetical protein 751683..751961 Rhodobacter sphaeroides ATCC 17029 4895891 YP_001042629.1 CDS Rsph17029_0744 NC_009049.1 752034 752768 D PFAM: Abortive infection protein; KEGG: rsp:RSP_2034 possible CAAX amino terminal protease family; abortive infection protein 752034..752768 Rhodobacter sphaeroides ATCC 17029 4895890 YP_001042630.1 CDS Rsph17029_0745 NC_009049.1 752784 752954 D KEGG: rsp:RSP_6030 hypothetical protein; hypothetical protein 752784..752954 Rhodobacter sphaeroides ATCC 17029 4895898 YP_001042631.1 CDS Rsph17029_0746 NC_009049.1 753066 753770 R KEGG: rsp:RSP_2035 hypothetical protein; hypothetical protein complement(753066..753770) Rhodobacter sphaeroides ATCC 17029 4895873 YP_001042632.1 CDS Rsph17029_0747 NC_009049.1 753886 754083 D KEGG: rsp:RSP_2036 putative ECF/RNA polymerase sigma factor protein; putative ECF/RNA polymerase sigma factor protein 753886..754083 Rhodobacter sphaeroides ATCC 17029 4895925 YP_001042633.1 CDS Rsph17029_0748 NC_009049.1 754178 754831 D KEGG: rsp:RSP_2037 hypothetical protein; hypothetical protein 754178..754831 Rhodobacter sphaeroides ATCC 17029 4895938 YP_001042634.1 CDS Rsph17029_0749 NC_009049.1 754833 755162 D hypothetical protein 754833..755162 Rhodobacter sphaeroides ATCC 17029 4895921 YP_001042635.1 CDS Rsph17029_0750 NC_009049.1 755300 755752 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2038 possible acetyltransferase; N-acetyltransferase GCN5 755300..755752 Rhodobacter sphaeroides ATCC 17029 4895902 YP_001042636.1 CDS Rsph17029_0751 NC_009049.1 755990 756742 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2039 short chain dehydrogenase; short chain dehydrogenase 755990..756742 Rhodobacter sphaeroides ATCC 17029 4895989 YP_001042637.1 CDS Rsph17029_0753 NC_009049.1 757754 758071 R KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein complement(757754..758071) Rhodobacter sphaeroides ATCC 17029 4897859 YP_001042638.1 CDS Rsph17029_0755 NC_009049.1 758578 758883 D KEGG: rsp:RSP_2080 putative tyrosine recombinase; putative tyrosine recombinase 758578..758883 Rhodobacter sphaeroides ATCC 17029 4895272 YP_001042639.1 CDS Rsph17029_0756 NC_009049.1 759037 759507 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2081 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(759037..759507) Rhodobacter sphaeroides ATCC 17029 4897949 YP_001042640.1 CDS Rsph17029_0757 NC_009049.1 759823 760134 R PFAM: ETC complex I subunit conserved region; KEGG: rsp:RSP_2082 putative NADH-ubiquinone oxidoreductase-related protein; ETC complex I subunit region complement(759823..760134) Rhodobacter sphaeroides ATCC 17029 4895999 YP_001042641.1 CDS Rsph17029_0758 NC_009049.1 760390 762573 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 760390..762573 Rhodobacter sphaeroides ATCC 17029 4896005 YP_001042642.1 CDS Rsph17029_0759 NC_009049.1 762913 763626 D KEGG: rsp:RSP_2084 hypothetical protein; hypothetical protein 762913..763626 Rhodobacter sphaeroides ATCC 17029 4896041 YP_001042643.1 CDS Rsph17029_0760 NC_009049.1 763632 763904 R hypothetical protein complement(763632..763904) Rhodobacter sphaeroides ATCC 17029 4896042 YP_001042644.1 CDS Rsph17029_0761 NC_009049.1 764005 764322 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_2086 putative antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(764005..764322) Rhodobacter sphaeroides ATCC 17029 4896038 YP_001042645.1 CDS Rsph17029_0762 NC_009049.1 764514 764705 D KEGG: rsp:RSP_2087 hypothetical protein; hypothetical protein 764514..764705 Rhodobacter sphaeroides ATCC 17029 4896013 YP_001042646.1 CDS Rsph17029_0763 NC_009049.1 764959 765102 D PFAM: Entericidin EcnAB; KEGG: rsp:RSP_6220 hypothetical protein; entericidin EcnAB 764959..765102 Rhodobacter sphaeroides ATCC 17029 4896064 YP_001042647.1 CDS Rsph17029_0764 NC_009049.1 765140 766948 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(765140..766948) Rhodobacter sphaeroides ATCC 17029 4896083 YP_001042648.1 CDS Rsph17029_0765 NC_009049.1 767876 771340 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(767876..771340) Rhodobacter sphaeroides ATCC 17029 4897986 YP_001042649.1 CDS Rsph17029_0766 NC_009049.1 771514 773874 D PFAM: UvrD/REP helicase; KEGG: rsp:RSP_2092 putative UvrD/DNA helicase II; UvrD/REP helicase 771514..773874 Rhodobacter sphaeroides ATCC 17029 4896102 YP_001042650.1 CDS Rsph17029_0767 NC_009049.1 773895 775040 R TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: rsp:RSP_2091 putative benzoate transporter, BenE; benzoate transporter complement(773895..775040) Rhodobacter sphaeroides ATCC 17029 4896103 YP_001042651.1 CDS Rsph17029_0768 NC_009049.1 776187 776402 R PFAM: protein of unknown function DUF1127; KEGG: rsp:RSP_6037 hypothetical protein; hypothetical protein complement(776187..776402) Rhodobacter sphaeroides ATCC 17029 4896096 YP_001042652.1 CDS Rsph17029_0769 NC_009049.1 776672 777733 D KEGG: rsp:RSP_2093 putative Mrp (multidrug resistance-associated proteins) family protein; putative Mrp (multidrug resistance-associated proteins) family protein 776672..777733 Rhodobacter sphaeroides ATCC 17029 4896124 YP_001042653.1 CDS Rsph17029_0770 NC_009049.1 777763 778230 D hypothetical protein 777763..778230 Rhodobacter sphaeroides ATCC 17029 4896120 YP_001042654.1 CDS Rsph17029_0771 NC_009049.1 778636 779142 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 778636..779142 Rhodobacter sphaeroides ATCC 17029 4896119 YP_001042655.1 CDS mraW NC_009049.1 779146 780141 D TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rsp:RSP_6038 methyltransferase MraW/YabC; S-adenosyl-methyltransferase MraW 779146..780141 Rhodobacter sphaeroides ATCC 17029 4896143 YP_001042656.1 CDS Rsph17029_0773 NC_009049.1 780142 780501 D KEGG: rsp:RSP_2097 putative FtsL; putative FtsL protein 780142..780501 Rhodobacter sphaeroides ATCC 17029 4896130 YP_001042657.1 CDS Rsph17029_0774 NC_009049.1 780498 782291 D PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rsp:RSP_2098 cell division protein FtsI/penicillin-binding protein 2; peptidoglycan glycosyltransferase 780498..782291 Rhodobacter sphaeroides ATCC 17029 4896128 YP_001042658.1 CDS murE NC_009049.1 782306 783793 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 782306..783793 Rhodobacter sphaeroides ATCC 17029 4896164 YP_001042659.1 CDS Rsph17029_0776 NC_009049.1 783882 785315 D TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rsp:RSP_2100 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 783882..785315 Rhodobacter sphaeroides ATCC 17029 4896160 YP_001042660.1 CDS mraY NC_009049.1 785328 786410 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 785328..786410 Rhodobacter sphaeroides ATCC 17029 4896162 YP_001042661.1 CDS Rsph17029_0778 NC_009049.1 786507 787088 D PFAM: transport-associated; KEGG: rsp:RSP_2102 hypothetical protein; transport-associated 786507..787088 Rhodobacter sphaeroides ATCC 17029 4896154 YP_001042662.1 CDS murD NC_009049.1 787519 788916 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 787519..788916 Rhodobacter sphaeroides ATCC 17029 4896205 YP_001042663.1 CDS Rsph17029_0780 NC_009049.1 788972 789442 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2104 hypothetical protein; glutathione-dependent formaldehyde-activating protein 788972..789442 Rhodobacter sphaeroides ATCC 17029 4896181 YP_001042664.1 CDS Rsph17029_0781 NC_009049.1 789795 790265 R PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rsp:RSP_2105 hypothetical protein; activator of Hsp90 ATPase 1 family protein complement(789795..790265) Rhodobacter sphaeroides ATCC 17029 4896216 YP_001042665.1 CDS Rsph17029_0782 NC_009049.1 790442 791608 D TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rsp:RSP_2106 cell division protein FtsW; cell division protein FtsW 790442..791608 Rhodobacter sphaeroides ATCC 17029 4896251 YP_001042666.1 CDS murG NC_009049.1 791610 792704 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 791610..792704 Rhodobacter sphaeroides ATCC 17029 4896233 YP_001042667.1 CDS murC NC_009049.1 792701 794113 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 792701..794113 Rhodobacter sphaeroides ATCC 17029 4896223 YP_001042668.1 CDS Rsph17029_0785 NC_009049.1 794128 794382 D KEGG: rsp:RSP_2109 hypothetical protein; hypothetical protein 794128..794382 Rhodobacter sphaeroides ATCC 17029 4896263 YP_001042669.1 CDS murB NC_009049.1 794379 795305 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 794379..795305 Rhodobacter sphaeroides ATCC 17029 4896260 YP_001042670.1 CDS ddl NC_009049.1 795345 796268 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 795345..796268 Rhodobacter sphaeroides ATCC 17029 4896264 YP_001042671.1 CDS Rsph17029_0788 NC_009049.1 796256 797182 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: rsp:RSP_2112 cell division septal protein FtsQ; cell division protein FtsQ 796256..797182 Rhodobacter sphaeroides ATCC 17029 4896259 YP_001042672.1 CDS Rsph17029_0789 NC_009049.1 797179 798513 D PFAM: cell division protein FtsA; KEGG: rsp:RSP_2113 cell division protein FtsA; cell division protein FtsA 797179..798513 Rhodobacter sphaeroides ATCC 17029 4896332 YP_001042673.1 CDS Rsph17029_0790 NC_009049.1 798693 800351 D GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 798693..800351 Rhodobacter sphaeroides ATCC 17029 4896339 YP_001042674.1 CDS lpxC NC_009049.1 800579 801499 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 800579..801499 Rhodobacter sphaeroides ATCC 17029 4896355 YP_001042675.1 CDS Rsph17029_0792 NC_009049.1 801614 802450 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rsp:RSP_2117 putative ComL lipoprotein; hypothetical protein 801614..802450 Rhodobacter sphaeroides ATCC 17029 4896352 YP_001042676.1 CDS Rsph17029_0793 NC_009049.1 802478 804118 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rsp:RSP_2118 DNA repair protein RecN; DNA repair protein RecN 802478..804118 Rhodobacter sphaeroides ATCC 17029 4896358 YP_001042677.1 CDS Rsph17029_0794 NC_009049.1 804129 804521 R KEGG: rsp:RSP_2119 hypothetical protein; hypothetical protein complement(804129..804521) Rhodobacter sphaeroides ATCC 17029 4896349 YP_001042678.1 CDS Rsph17029_0795 NC_009049.1 804518 805891 R PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_2120 putative D-lactate dehydrogenase (cytochrome), FAD/FMN-containing oxidoreductase; D-lactate dehydrogenase complement(804518..805891) Rhodobacter sphaeroides ATCC 17029 4896346 YP_001042679.1 CDS Rsph17029_0796 NC_009049.1 806027 806656 R KEGG: rsp:RSP_2121 hypothetical protein; hypothetical protein complement(806027..806656) Rhodobacter sphaeroides ATCC 17029 4896371 YP_001042680.1 CDS Rsph17029_0797 NC_009049.1 806861 807559 R PFAM: Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; KEGG: rsp:RSP_2122 putative dimethylamine corrinoid protein; methionine synthase complement(806861..807559) Rhodobacter sphaeroides ATCC 17029 4896368 YP_001042681.1 CDS Rsph17029_0798 NC_009049.1 807716 808804 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rsp:RSP_2123 radical SAM domain protein; radical SAM domain-containing protein 807716..808804 Rhodobacter sphaeroides ATCC 17029 4896384 YP_001042682.1 CDS Rsph17029_0799 NC_009049.1 808902 809909 R catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine; methionine synthase I complement(808902..809909) Rhodobacter sphaeroides ATCC 17029 4896378 YP_001042683.1 CDS Rsph17029_0800 NC_009049.1 810121 810441 R PFAM: protein of unknown function DUF1476; KEGG: rsp:RSP_2125 hypothetical protein; hypothetical protein complement(810121..810441) Rhodobacter sphaeroides ATCC 17029 4896409 YP_001042684.1 CDS Rsph17029_0801 NC_009049.1 810624 811376 D KEGG: rsp:RSP_2126 SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 810624..811376 Rhodobacter sphaeroides ATCC 17029 4896397 YP_001042685.1 CDS Rsph17029_0802 NC_009049.1 811391 811630 D TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: rsp:RSP_2127 component of phosphoribosylformylglycinamidine (FGAM) synthetase; phosphoribosylformylglycinamidine synthase subunit PurS 811391..811630 Rhodobacter sphaeroides ATCC 17029 4896393 YP_001042686.1 CDS Rsph17029_0803 NC_009049.1 811862 812530 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 811862..812530 Rhodobacter sphaeroides ATCC 17029 4896424 YP_001042687.1 CDS Rsph17029_0804 NC_009049.1 812527 814341 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2129 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 812527..814341 Rhodobacter sphaeroides ATCC 17029 4896418 YP_001042688.1 CDS Rsph17029_0805 NC_009049.1 814351 815679 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2130 two component, sigma54 specific transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 814351..815679 Rhodobacter sphaeroides ATCC 17029 4896414 YP_001042689.1 CDS Rsph17029_0806 NC_009049.1 816186 818858 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: rsp:RSP_2131 ribonuclease E; ribonuclease 816186..818858 Rhodobacter sphaeroides ATCC 17029 4896460 YP_001042690.1 CDS Rsph17029_0807 NC_009049.1 819039 819344 R PFAM: SirA family protein; KEGG: rsp:RSP_2132 protein of unknown function UPF0033; SirA family protein complement(819039..819344) Rhodobacter sphaeroides ATCC 17029 4896455 YP_001042691.1 CDS Rsph17029_0808 NC_009049.1 819411 820157 D PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rsp:RSP_2134 putative cytochrome c-type biogenesis protein CcdA; cytochrome c biogenesis protein, transmembrane region 819411..820157 Rhodobacter sphaeroides ATCC 17029 4896446 YP_001042692.1 CDS Rsph17029_0809 NC_009049.1 820186 821400 D KEGG: rsp:RSP_2136 hypothetical protein; hypothetical protein 820186..821400 Rhodobacter sphaeroides ATCC 17029 4896433 YP_001042693.1 CDS Rsph17029_0810 NC_009049.1 821382 821603 R KEGG: rsp:RSP_2135 hypothetical protein; hypothetical protein complement(821382..821603) Rhodobacter sphaeroides ATCC 17029 4896482 YP_001042694.1 CDS Rsph17029_0811 NC_009049.1 821600 821803 R KEGG: rsp:RSP_2137 hypothetical protein; hypothetical protein complement(821600..821803) Rhodobacter sphaeroides ATCC 17029 4896478 YP_001042695.1 CDS fumC NC_009049.1 821803 823197 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(821803..823197) Rhodobacter sphaeroides ATCC 17029 4896479 YP_001042696.1 CDS Rsph17029_0813 NC_009049.1 823364 823822 R PFAM: protein of unknown function DUF1321; KEGG: rsp:RSP_2139 hypothetical protein; hypothetical protein complement(823364..823822) Rhodobacter sphaeroides ATCC 17029 4896466 YP_001042697.1 CDS Rsph17029_0814 NC_009049.1 823925 824617 R KEGG: rsp:RSP_2140 putative von Willebrand factor type A domain protein; von Willebrand factor type A domain-containing protein complement(823925..824617) Rhodobacter sphaeroides ATCC 17029 4896493 YP_001042698.1 CDS Rsph17029_0815 NC_009049.1 825504 826550 R KEGG: rsp:RSP_2141 ABC polyamine transporter, periplasmic substrate-binding protein; polyamine ABC transporter substrate-binding protein complement(825504..826550) Rhodobacter sphaeroides ATCC 17029 4896489 YP_001042699.1 CDS Rsph17029_0816 NC_009049.1 826952 828190 D PFAM: aminotransferase, class V; KEGG: rsp:RSP_2142 NifS-related protein; class V aminotransferase 826952..828190 Rhodobacter sphaeroides ATCC 17029 4896487 YP_001042700.1 CDS Rsph17029_0817 NC_009049.1 828341 829756 D PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rsp:RSP_2143 DNA photolyase, cryptochrome 1 apoprotein (blue light photoreceptor); deoxyribodipyrimidine photo-lyase 828341..829756 Rhodobacter sphaeroides ATCC 17029 4896480 YP_001042701.1 CDS Rsph17029_0818 NC_009049.1 829790 831001 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2144 cyclopropane-fatty-acyl-phospholipid synthase CfaS; cyclopropane-fatty-acyl-phospholipid synthase 829790..831001 Rhodobacter sphaeroides ATCC 17029 4896521 YP_001042702.1 CDS Rsph17029_0819 NC_009049.1 831027 831467 D KEGG: rsp:RSP_2145 tellurite resistance protein; tellurite resistance protein 831027..831467 Rhodobacter sphaeroides ATCC 17029 4896508 YP_001042703.1 CDS Rsph17029_0820 NC_009049.1 831467 832552 D PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2146 tellurite resistance protein; NUDIX hydrolase 831467..832552 Rhodobacter sphaeroides ATCC 17029 4896584 YP_001042704.1 CDS Rsph17029_0821 NC_009049.1 832888 833922 D CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 832888..833922 Rhodobacter sphaeroides ATCC 17029 4896617 YP_001042705.1 CDS Rsph17029_0822 NC_009049.1 833926 836469 D PFAM: MscS Mechanosensitive ion channel; KEGG: rsp:RSP_2148 small conductance mechanosensitive ion channel; mechanosensitive ion channel protein MscS 833926..836469 Rhodobacter sphaeroides ATCC 17029 4896607 YP_001042706.1 CDS Rsph17029_0823 NC_009049.1 836469 837188 D PFAM: Threonyl/alanyl tRNA synthetase, SAD; KEGG: rsp:RSP_2149 alanyl-transfer RNA synthetase domain protein; threonyl/alanyl tRNA synthetase 836469..837188 Rhodobacter sphaeroides ATCC 17029 4896605 YP_001042707.1 CDS Rsph17029_0824 NC_009049.1 837314 838018 R PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2150 predicted glycosyl transferase, family 2; glycosyl transferase family protein complement(837314..838018) Rhodobacter sphaeroides ATCC 17029 4896614 YP_001042708.1 CDS Rsph17029_0825 NC_009049.1 838015 838566 R KEGG: rsp:RSP_2151 putative DedA family, membrane protein; DedA family membrane protein complement(838015..838566) Rhodobacter sphaeroides ATCC 17029 4896629 YP_001042709.1 CDS Rsph17029_0826 NC_009049.1 838563 839651 R KEGG: rsp:RSP_2152 putative ceramide glucosyltransferase; putative ceramide glucosyltransferase complement(838563..839651) Rhodobacter sphaeroides ATCC 17029 4896877 YP_001042710.1 CDS Rsph17029_0827 NC_009049.1 839651 840457 R PFAM: metallophosphoesterase; KEGG: rsp:RSP_2153 hypothetical protein; metallophosphoesterase complement(839651..840457) Rhodobacter sphaeroides ATCC 17029 4896679 YP_001042711.1 CDS Rsph17029_0828 NC_009049.1 840591 841892 R KEGG: rsp:RSP_2154 hypothetical protein; hypothetical protein complement(840591..841892) Rhodobacter sphaeroides ATCC 17029 4896714 YP_001042712.1 CDS hisD NC_009049.1 841894 843219 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(841894..843219) Rhodobacter sphaeroides ATCC 17029 4896765 YP_001042713.1 CDS Rsph17029_0830 NC_009049.1 843229 844026 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2156 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(843229..844026) Rhodobacter sphaeroides ATCC 17029 4896779 YP_001042714.1 CDS Rsph17029_0831 NC_009049.1 844023 844958 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2157 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(844023..844958) Rhodobacter sphaeroides ATCC 17029 4896814 YP_001042715.1 CDS Rsph17029_0832 NC_009049.1 845506 846603 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2158 ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein complement(845506..846603) Rhodobacter sphaeroides ATCC 17029 4896808 YP_001042716.1 CDS Rsph17029_0833 NC_009049.1 846623 847756 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2159 ABC transporter, ATPase subunit; ABC transporter complement(846623..847756) Rhodobacter sphaeroides ATCC 17029 4896851 YP_001042717.1 CDS Rsph17029_0834 NC_009049.1 847833 848597 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2160 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(847833..848597) Rhodobacter sphaeroides ATCC 17029 4896666 YP_001042718.1 CDS Rsph17029_0835 NC_009049.1 848793 849500 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_2161 efflux channel; PA-phosphatase-like phosphoesterase complement(848793..849500) Rhodobacter sphaeroides ATCC 17029 4896690 YP_001042719.1 CDS Rsph17029_0836 NC_009049.1 849796 850599 D KEGG: rsp:RSP_2163 lytic murein transglycosylase, putative; lytic murein transglycosylase 849796..850599 Rhodobacter sphaeroides ATCC 17029 4896789 YP_001042720.1 CDS Rsph17029_0837 NC_009049.1 850966 851442 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_2165 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(850966..851442) Rhodobacter sphaeroides ATCC 17029 4897152 YP_001042721.1 CDS Rsph17029_0838 NC_009049.1 851532 854972 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 851532..854972 Rhodobacter sphaeroides ATCC 17029 4896812 YP_001042722.1 CDS Rsph17029_0839 NC_009049.1 855205 855945 D PFAM: Rhomboid family protein; KEGG: rsp:RSP_2167 hypothetical protein; rhomboid family protein 855205..855945 Rhodobacter sphaeroides ATCC 17029 4896849 YP_001042723.1 CDS Rsph17029_0840 NC_009049.1 855942 856298 D PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2168 hypothetical protein; glutathione-dependent formaldehyde-activating protein 855942..856298 Rhodobacter sphaeroides ATCC 17029 4896658 YP_001042724.1 CDS Rsph17029_0841 NC_009049.1 856523 857308 R PFAM: inositol monophosphatase; KEGG: rsp:RSP_2169 inositol monophosphatase family protein; inositol monophosphatase complement(856523..857308) Rhodobacter sphaeroides ATCC 17029 4896678 YP_001042725.1 CDS Rsph17029_0842 NC_009049.1 857441 858958 R PFAM: phosphate transporter; KEGG: rsp:RSP_2170 phosphate transporter, Pit family; phosphate transporter complement(857441..858958) Rhodobacter sphaeroides ATCC 17029 4896801 YP_001042726.1 CDS Rsph17029_0843 NC_009049.1 859086 859991 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2171 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(859086..859991) Rhodobacter sphaeroides ATCC 17029 4896833 YP_001042727.1 CDS Rsph17029_0844 NC_009049.1 860086 860952 D TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: rsp:RSP_2172 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 860086..860952 Rhodobacter sphaeroides ATCC 17029 4896815 YP_001042728.1 CDS Rsph17029_0845 NC_009049.1 861099 861644 R PFAM: BioY protein; KEGG: rsp:RSP_2173 putative biotin biosynthesis protein BioY; BioY protein complement(861099..861644) Rhodobacter sphaeroides ATCC 17029 4896864 YP_001042729.1 CDS Rsph17029_0846 NC_009049.1 861658 862254 R PFAM: cobalt transport protein; KEGG: rsp:RSP_2174 putative ABC transporter, inner membrane subunit; cobalt transport protein complement(861658..862254) Rhodobacter sphaeroides ATCC 17029 4896615 YP_001042730.1 CDS Rsph17029_0847 NC_009049.1 862229 862969 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2175 ABC transporter, ATPase subunit; ABC transporter complement(862229..862969) Rhodobacter sphaeroides ATCC 17029 4896636 YP_001042731.1 CDS Rsph17029_0848 NC_009049.1 863233 864510 R catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase complement(863233..864510) Rhodobacter sphaeroides ATCC 17029 4896626 YP_001042732.1 CDS Rsph17029_0849 NC_009049.1 864763 865881 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rsp:RSP_2177 DNA processing protein; DNA protecting protein DprA 864763..865881 Rhodobacter sphaeroides ATCC 17029 4897012 YP_001042733.1 CDS Rsph17029_0850 NC_009049.1 866129 868783 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 866129..868783 Rhodobacter sphaeroides ATCC 17029 4896428 YP_001042734.1 CDS Rsph17029_0851 NC_009049.1 868832 869860 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2179 ABC glycine betaine/L-proline tranporter, ATPase subunit, ProV; ABC transporter complement(868832..869860) Rhodobacter sphaeroides ATCC 17029 4895957 YP_001042735.1 CDS Rsph17029_0852 NC_009049.1 869857 870711 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2180 ABC glycine betaine/L-proline transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(869857..870711) Rhodobacter sphaeroides ATCC 17029 4896483 YP_001042736.1 CDS Rsph17029_0853 NC_009049.1 870816 871742 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rsp:RSP_2181 ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit; substrate-binding region of ABC-type glycine betaine transport system complement(870816..871742) Rhodobacter sphaeroides ATCC 17029 4897933 YP_001042737.1 CDS Rsph17029_0854 NC_009049.1 871829 872413 D HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 871829..872413 Rhodobacter sphaeroides ATCC 17029 4897830 YP_001042738.1 CDS Rsph17029_0855 NC_009049.1 872410 873861 D catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 872410..873861 Rhodobacter sphaeroides ATCC 17029 4897794 YP_001042739.1 CDS Rsph17029_0856 NC_009049.1 873871 875517 D catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 873871..875517 Rhodobacter sphaeroides ATCC 17029 4897811 YP_001042740.1 CDS Rsph17029_0857 NC_009049.1 875632 876276 D PFAM: nuclease (SNase domain protein); KEGG: rsp:RSP_2185 nuclease (SNase-like); nuclease 875632..876276 Rhodobacter sphaeroides ATCC 17029 4897793 YP_001042741.1 CDS Rsph17029_0858 NC_009049.1 876584 877969 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rsp:RSP_2186 transcriptional regulator, MerR family; hypothetical protein complement(876584..877969) Rhodobacter sphaeroides ATCC 17029 4897696 YP_001042742.1 CDS Rsph17029_0859 NC_009049.1 878031 879251 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2187 multidrug efflux pump, major facilitator superfamily (MFS); Bcr/CflA subfamily drug resistance transporter complement(878031..879251) Rhodobacter sphaeroides ATCC 17029 4897708 YP_001042743.1 CDS Rsph17029_0860 NC_009049.1 879288 879641 R PFAM: protein of unknown function DUF486; KEGG: rsp:RSP_2188 hypothetical protein; hypothetical protein complement(879288..879641) Rhodobacter sphaeroides ATCC 17029 4896921 YP_001042744.1 CDS Rsph17029_0861 NC_009049.1 879770 881302 D PFAM: carboxyl transferase; KEGG: rsp:RSP_2189 propionyl-CoA carboxylase beta chain; carboxyl transferase 879770..881302 Rhodobacter sphaeroides ATCC 17029 4896946 YP_001042745.1 CDS Rsph17029_0862 NC_009049.1 881454 881801 D KEGG: rsp:RSP_6040 hypothetical protein; hypothetical protein 881454..881801 Rhodobacter sphaeroides ATCC 17029 4897066 YP_001042746.1 CDS Rsph17029_0863 NC_009049.1 882223 882621 D KEGG: rsp:RSP_2190 hypothetical protein; hypothetical protein 882223..882621 Rhodobacter sphaeroides ATCC 17029 4897054 YP_001042747.1 CDS Rsph17029_0864 NC_009049.1 882935 883162 D KEGG: rsp:RSP_6221 hypothetical protein; hypothetical protein 882935..883162 Rhodobacter sphaeroides ATCC 17029 4896253 YP_001042748.1 CDS Rsph17029_0865 NC_009049.1 883345 885345 D PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rsp:RSP_2191 propionyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase subunit L 883345..885345 Rhodobacter sphaeroides ATCC 17029 4898057 YP_001042749.1 CDS Rsph17029_0866 NC_009049.1 885347 885808 R KEGG: rsp:RSP_6041 hypothetical protein; hypothetical protein complement(885347..885808) Rhodobacter sphaeroides ATCC 17029 4896904 YP_001042750.1 CDS Rsph17029_0867 NC_009049.1 885882 888011 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 885882..888011 Rhodobacter sphaeroides ATCC 17029 4896924 YP_001042751.1 CDS gcvT NC_009049.1 888576 889709 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 888576..889709 Rhodobacter sphaeroides ATCC 17029 4896943 YP_001042752.1 CDS Rsph17029_0869 NC_009049.1 889718 890074 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 889718..890074 Rhodobacter sphaeroides ATCC 17029 4896925 YP_001042753.1 CDS Rsph17029_0870 NC_009049.1 890078 892948 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 890078..892948 Rhodobacter sphaeroides ATCC 17029 4896994 YP_001042754.1 CDS Rsph17029_0871 NC_009049.1 893122 895323 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_2196 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase complement(893122..895323) Rhodobacter sphaeroides ATCC 17029 4897682 YP_001042755.1 CDS Rsph17029_0872 NC_009049.1 895338 896549 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(895338..896549) Rhodobacter sphaeroides ATCC 17029 4896988 YP_001042756.1 CDS Rsph17029_0873 NC_009049.1 896620 897063 R PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_2198 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(896620..897063) Rhodobacter sphaeroides ATCC 17029 4897106 YP_001042757.1 CDS Rsph17029_0874 NC_009049.1 897089 898864 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rsp:RSP_2199 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(897089..898864) Rhodobacter sphaeroides ATCC 17029 4897574 YP_001042758.1 CDS Rsph17029_0875 NC_009049.1 898883 899278 R PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2200 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(898883..899278) Rhodobacter sphaeroides ATCC 17029 4897680 YP_001042759.1 CDS Rsph17029_0876 NC_009049.1 899403 899783 R PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2201 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(899403..899783) Rhodobacter sphaeroides ATCC 17029 4897409 YP_001042760.1 CDS Rsph17029_0877 NC_009049.1 899891 900382 D TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2202 hypothetical protein; hypothetical protein 899891..900382 Rhodobacter sphaeroides ATCC 17029 4897710 YP_001042761.1 CDS Rsph17029_0878 NC_009049.1 900379 900885 D PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2203 hypothetical protein; thioesterase superfamily protein 900379..900885 Rhodobacter sphaeroides ATCC 17029 4897704 YP_001042762.1 CDS Rsph17029_0879 NC_009049.1 900878 902212 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rsp:RSP_2204 multidrug efflux pump, MATE family; MATE efflux family protein 900878..902212 Rhodobacter sphaeroides ATCC 17029 4897722 YP_001042763.1 CDS Rsph17029_0880 NC_009049.1 902224 902982 R KEGG: rsp:RSP_2205 hypothetical protein; hypothetical protein complement(902224..902982) Rhodobacter sphaeroides ATCC 17029 4897843 YP_001042764.1 CDS Rsph17029_0881 NC_009049.1 902979 903899 R PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_2206 hypothetical protein; hypothetical protein complement(902979..903899) Rhodobacter sphaeroides ATCC 17029 4897741 YP_001042765.1 CDS Rsph17029_0882 NC_009049.1 903984 904784 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(903984..904784) Rhodobacter sphaeroides ATCC 17029 4897854 YP_001042766.1 CDS Rsph17029_0883 NC_009049.1 904786 905754 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_2208 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(904786..905754) Rhodobacter sphaeroides ATCC 17029 4897849 YP_001042767.1 CDS Rsph17029_0884 NC_009049.1 905751 906845 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_2209 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(905751..906845) Rhodobacter sphaeroides ATCC 17029 4897939 YP_001042768.1 CDS Rsph17029_0885 NC_009049.1 906845 908422 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2210 ABC sugar transporter, fused ATPase subunits; ABC transporter complement(906845..908422) Rhodobacter sphaeroides ATCC 17029 4897871 YP_001042769.1 CDS Rsph17029_0886 NC_009049.1 908423 909418 R PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_2211 ABC transporter, periplasmic substrate-binding protein; basic membrane lipoprotein complement(908423..909418) Rhodobacter sphaeroides ATCC 17029 4897905 YP_001042770.1 CDS Rsph17029_0887 NC_009049.1 909572 910054 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2212 putative acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(909572..910054) Rhodobacter sphaeroides ATCC 17029 4895664 YP_001042771.1 CDS Rsph17029_0888 NC_009049.1 910051 910659 R PFAM: peptidase M22, glycoprotease; KEGG: rsp:RSP_2213 hypothetical protein; peptidase M22, glycoprotease complement(910051..910659) Rhodobacter sphaeroides ATCC 17029 4897908 YP_001042772.1 CDS Rsph17029_0889 NC_009049.1 910649 911209 R PFAM: nitrogen-fixing NifU domain protein; KEGG: rsp:RSP_2214 nitrogen-fixing NifU; NifU domain-containing protein complement(910649..911209) Rhodobacter sphaeroides ATCC 17029 4897810 YP_001042773.1 CDS Rsph17029_0890 NC_009049.1 911356 911811 R PFAM: UspA domain protein; KEGG: rsp:RSP_2215 hypothetical protein; UspA domain-containing protein complement(911356..911811) Rhodobacter sphaeroides ATCC 17029 4897989 YP_001042774.1 CDS Rsph17029_0891 NC_009049.1 911865 912728 R PFAM: aminotransferase, class IV; KEGG: rsp:RSP_2216 branched-chain amino acid aminotransferase; aminotransferase complement(911865..912728) Rhodobacter sphaeroides ATCC 17029 4897489 YP_001042775.1 CDS Rsph17029_0892 NC_009049.1 912799 913278 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_2217 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(912799..913278) Rhodobacter sphaeroides ATCC 17029 4897528 YP_001042776.1 CDS Rsph17029_0893 NC_009049.1 913542 914084 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_2218 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 913542..914084 Rhodobacter sphaeroides ATCC 17029 4897278 YP_001042777.1 CDS Rsph17029_0894 NC_009049.1 914119 915000 R PFAM: lipid A biosynthesis acyltransferase; KEGG: rsp:RSP_2219 putative lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase complement(914119..915000) Rhodobacter sphaeroides ATCC 17029 4897309 YP_001042778.1 CDS Rsph17029_0895 NC_009049.1 915299 916372 R PFAM: flagellar motor switch protein FliG; KEGG: rsp:RSP_2220 possible flagellar motor switch protein (FliG); flagellar motor switch protein FliG complement(915299..916372) Rhodobacter sphaeroides ATCC 17029 4896447 YP_001042779.1 CDS Rsph17029_0896 NC_009049.1 916432 916587 R KEGG: rsp:RSP_6042 hypothetical protein; hypothetical protein complement(916432..916587) Rhodobacter sphaeroides ATCC 17029 4897286 YP_001042780.1 CDS Rsph17029_0897 NC_009049.1 916715 918019 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(916715..918019) Rhodobacter sphaeroides ATCC 17029 4897113 YP_001042781.1 CDS Rsph17029_0898 NC_009049.1 918127 918381 R PFAM: protein of unknown function DUF333; KEGG: rsp:RSP_2222 hypothetical protein; hypothetical protein complement(918127..918381) Rhodobacter sphaeroides ATCC 17029 4897872 YP_001042782.1 CDS Rsph17029_0899 NC_009049.1 918539 921685 R PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2223 AcrB/AcrD/AcrF multidrug efflux pump; acriflavin resistance protein complement(918539..921685) Rhodobacter sphaeroides ATCC 17029 4897014 YP_001042783.1 CDS Rsph17029_0900 NC_009049.1 921689 922855 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2224 multidrug efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit complement(921689..922855) Rhodobacter sphaeroides ATCC 17029 4897816 YP_001042784.1 CDS Rsph17029_0901 NC_009049.1 923098 923769 D KEGG: rsp:RSP_2225 hypothetical protein; hypothetical protein 923098..923769 Rhodobacter sphaeroides ATCC 17029 4897896 YP_001042785.1 CDS Rsph17029_0902 NC_009049.1 924037 926121 R KEGG: rsp:RSP_2226 glycosidase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(924037..926121) Rhodobacter sphaeroides ATCC 17029 4897795 YP_001042786.1 CDS Rsph17029_0903 NC_009049.1 926118 927386 R PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_2227 ADP-glucose pyrophosphorylase; nucleotidyl transferase complement(926118..927386) Rhodobacter sphaeroides ATCC 17029 4897785 YP_001042787.1 CDS Rsph17029_0904 NC_009049.1 927817 928347 R TIGRFAM: PAS sensor protein; KEGG: rsp:RSP_2228 PAS domain containing protein; putative PAS/PAC sensor protein complement(927817..928347) Rhodobacter sphaeroides ATCC 17029 4897683 YP_001042788.1 CDS Rsph17029_0905 NC_009049.1 928419 931931 D KEGG: rsp:RSP_2229 chemotaxis multidomain, CheB methylesterase/CheR, methylase; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; HWE histidine kinase; PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 928419..931931 Rhodobacter sphaeroides ATCC 17029 4895479 YP_001042789.1 CDS Rsph17029_0906 NC_009049.1 931951 932265 D KEGG: rsp:RSP_2230 response regulator receiver domain protein; response regulator receiver/SARP domain-containing protein 931951..932265 Rhodobacter sphaeroides ATCC 17029 4895327 YP_001042790.1 CDS Rsph17029_0907 NC_009049.1 932492 932746 D KEGG: rsp:RSP_2231 hypothetical protein; hypothetical protein 932492..932746 Rhodobacter sphaeroides ATCC 17029 4896501 YP_001042791.1 CDS Rsph17029_0908 NC_009049.1 933127 934584 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rsp:RSP_2232 putative uracil-DNA glycosylase; phage SPO1 DNA polymerase-related protein complement(933127..934584) Rhodobacter sphaeroides ATCC 17029 4895181 YP_001042792.1 CDS Rsph17029_0909 NC_009049.1 934584 935804 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rsp:RSP_2234 predicted DNA-binding protein; radical SAM domain-containing protein complement(934584..935804) Rhodobacter sphaeroides ATCC 17029 4895547 YP_001042793.1 CDS Rsph17029_0910 NC_009049.1 935887 936948 R PFAM: beta-lactamase; KEGG: rsp:RSP_2235 hypothetical protein; beta-lactamase complement(935887..936948) Rhodobacter sphaeroides ATCC 17029 4896523 YP_001042794.1 CDS Rsph17029_0911 NC_009049.1 937030 937497 D PFAM: regulatory protein, MarR; KEGG: rsp:RSP_2236 transcriptional regulator, MarR family; MarR family transcriptional regulator 937030..937497 Rhodobacter sphaeroides ATCC 17029 4897084 YP_001042795.1 CDS Rsph17029_0912 NC_009049.1 937494 938600 D PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2237 membrane fusion protein (MFP) family protein; secretion protein HlyD family protein 937494..938600 Rhodobacter sphaeroides ATCC 17029 4896920 YP_001042796.1 CDS Rsph17029_0913 NC_009049.1 938614 940137 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2238 multidrug efflux pump, major facilitator superfamily (MFS); EmrB/QacA family drug resistance transporter 938614..940137 Rhodobacter sphaeroides ATCC 17029 4895689 YP_001042797.1 CDS Rsph17029_0914 NC_009049.1 940926 941711 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: rsp:RSP_2239 tRNA/rRNA metyltransferase; RNA methyltransferase 940926..941711 Rhodobacter sphaeroides ATCC 17029 4895231 YP_001042798.1 CDS Rsph17029_0915 NC_009049.1 941900 942346 D PFAM: CoA-binding domain protein; KEGG: rsp:RSP_2240 hypothetical protein; CoA-binding domain-containing protein 941900..942346 Rhodobacter sphaeroides ATCC 17029 4897941 YP_001042799.1 CDS hisE NC_009049.1 942548 942859 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(942548..942859) Rhodobacter sphaeroides ATCC 17029 4896169 YP_001042800.1 CDS Rsph17029_0917 NC_009049.1 942856 943617 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(942856..943617) Rhodobacter sphaeroides ATCC 17029 4895971 YP_001042801.1 CDS Rsph17029_0918 NC_009049.1 943752 944471 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(943752..944471) Rhodobacter sphaeroides ATCC 17029 4896706 YP_001042802.1 CDS Rsph17029_0919 NC_009049.1 944611 944991 D KEGG: rsp:RSP_2244 hypothetical protein; hypothetical protein 944611..944991 Rhodobacter sphaeroides ATCC 17029 4896463 YP_001042803.1 CDS hisH NC_009049.1 945215 945853 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(945215..945853) Rhodobacter sphaeroides ATCC 17029 4897218 YP_001042804.1 CDS hisB NC_009049.1 945853 946440 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(945853..946440) Rhodobacter sphaeroides ATCC 17029 4895981 YP_001042805.1 CDS Rsph17029_0922 NC_009049.1 946677 948680 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 946677..948680 Rhodobacter sphaeroides ATCC 17029 4895854 YP_001042806.1 CDS Rsph17029_0923 NC_009049.1 948819 950039 R PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2249 multidrug (tetracycline) efflux pump, major facilitator superfamily (MFS); major facilitator superfamily transporter complement(948819..950039) Rhodobacter sphaeroides ATCC 17029 4895144 YP_001042807.1 CDS Rsph17029_0924 NC_009049.1 950070 950798 R KEGG: rsp:RSP_2250 hypothetical protein; hypothetical protein complement(950070..950798) Rhodobacter sphaeroides ATCC 17029 4895425 YP_001042808.1 CDS Rsph17029_0925 NC_009049.1 950791 951579 R TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2251 putative beta-ketoadipate enol-lactone hydrolase; 3-oxoadipate enol-lactonase complement(950791..951579) Rhodobacter sphaeroides ATCC 17029 4895980 YP_001042809.1 CDS Rsph17029_0926 NC_009049.1 951807 952784 R PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rsp:RSP_2252 threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(951807..952784) Rhodobacter sphaeroides ATCC 17029 4896952 YP_001042810.1 CDS Rsph17029_0927 NC_009049.1 952781 953605 R PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2253 predicted hydrolase or acyltransferase; alpha/beta hydrolase complement(952781..953605) Rhodobacter sphaeroides ATCC 17029 4896934 YP_001042811.1 CDS Rsph17029_0928 NC_009049.1 953963 955750 D KEGG: rsp:RSP_2254 ABC efflux transporter, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 953963..955750 Rhodobacter sphaeroides ATCC 17029 4897630 YP_001042812.1 CDS Rsph17029_0929 NC_009049.1 955856 957745 D activates fatty acids by binding to coenzyme A; AMP-binding protein 955856..957745 Rhodobacter sphaeroides ATCC 17029 4897272 YP_001042813.1 CDS Rsph17029_0930 NC_009049.1 958116 958553 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(958116..958553) Rhodobacter sphaeroides ATCC 17029 4895645 YP_001042814.1 CDS Rsph17029_0931 NC_009049.1 958553 959473 R PFAM: PfkB domain protein; KEGG: rsp:RSP_2257 putative fructokinase; ribokinase-like domain-containing protein complement(958553..959473) Rhodobacter sphaeroides ATCC 17029 4897621 YP_001042815.1 CDS Rsph17029_0932 NC_009049.1 959487 960446 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(959487..960446) Rhodobacter sphaeroides ATCC 17029 4896432 YP_001042816.1 CDS Rsph17029_0933 NC_009049.1 960513 960950 R KEGG: rsp:RSP_2259 transmembrane protein; transmembrane protein complement(960513..960950) Rhodobacter sphaeroides ATCC 17029 4898003 YP_001042817.1 CDS Rsph17029_0934 NC_009049.1 960955 962052 R KEGG: rsp:RSP_2260 hypothetical protein; hypothetical protein complement(960955..962052) Rhodobacter sphaeroides ATCC 17029 4897358 YP_001042818.1 CDS Rsph17029_0935 NC_009049.1 962054 963163 R KEGG: rsp:RSP_2261 antifreeze protein, type I; antifreeze protein, type I complement(962054..963163) Rhodobacter sphaeroides ATCC 17029 4897449 YP_001042819.1 CDS Rsph17029_0936 NC_009049.1 963344 963982 R KEGG: rsp:RSP_2262 hypothetical protein; hypothetical protein complement(963344..963982) Rhodobacter sphaeroides ATCC 17029 4897305 YP_001042820.1 CDS Rsph17029_0937 NC_009049.1 963998 964963 R KEGG: rsp:RSP_2263 hypothetical protein; hypothetical protein complement(963998..964963) Rhodobacter sphaeroides ATCC 17029 4896984 YP_001042821.1 CDS Rsph17029_0938 NC_009049.1 964976 966166 R PFAM: toxic anion resistance family protein; KEGG: rsp:RSP_2264 tellurite resistance protein; toxic anion resistance family protein complement(964976..966166) Rhodobacter sphaeroides ATCC 17029 4896459 YP_001042822.1 CDS Rsph17029_0939 NC_009049.1 966315 967193 R KEGG: rsp:RSP_2265 hypothetical protein; hypothetical protein complement(966315..967193) Rhodobacter sphaeroides ATCC 17029 4896885 YP_001042823.1 CDS Rsph17029_0940 NC_009049.1 967378 968847 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rsp:RSP_2266 pseudouridine synthase, (predicted); RNA-binding S4 domain-containing protein complement(967378..968847) Rhodobacter sphaeroides ATCC 17029 4895386 YP_001042824.1 CDS Rsph17029_0941 NC_009049.1 969181 969633 D PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rsp:RSP_2267 putative cytidine deaminase; zinc-binding CMP/dCMP deaminase 969181..969633 Rhodobacter sphaeroides ATCC 17029 4898022 YP_001042825.1 CDS Rsph17029_0942 NC_009049.1 969644 970336 R PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2268 metallo beta lactamase superfamily; beta-lactamase domain-containing protein complement(969644..970336) Rhodobacter sphaeroides ATCC 17029 4897729 YP_001042826.1 CDS Rsph17029_0943 NC_009049.1 970399 971055 D KEGG: rsp:RSP_6222 hypothetical protein; hypothetical protein 970399..971055 Rhodobacter sphaeroides ATCC 17029 4897295 YP_001042827.1 CDS gatC NC_009049.1 971087 971374 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 971087..971374 Rhodobacter sphaeroides ATCC 17029 4897048 YP_001042828.1 CDS gatA NC_009049.1 971371 972846 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 971371..972846 Rhodobacter sphaeroides ATCC 17029 4896823 YP_001042829.1 CDS Rsph17029_0946 NC_009049.1 972882 973682 D KEGG: rsp:RSP_2271 hypothetical protein; hypothetical protein 972882..973682 Rhodobacter sphaeroides ATCC 17029 4896732 YP_001042830.1 CDS Rsph17029_0947 NC_009049.1 973686 974357 D PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: rsp:RSP_2272 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 973686..974357 Rhodobacter sphaeroides ATCC 17029 4896481 YP_001042831.1 CDS Rsph17029_0948 NC_009049.1 974845 976059 R KEGG: rsp:RSP_2273 putative anaerobic phenylacetate CoA ligase; putative anaerobic phenylacetate CoA ligase complement(974845..976059) Rhodobacter sphaeroides ATCC 17029 4897752 YP_001042832.1 CDS Rsph17029_0949 NC_009049.1 976074 976904 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2274 ABC branched amino acid transporter family, ATPase subunit; ABC transporter complement(976074..976904) Rhodobacter sphaeroides ATCC 17029 4895407 YP_001042833.1 CDS Rsph17029_0950 NC_009049.1 976991 978280 R KEGG: rsp:RSP_2275 ABC branched amino acid transporter family, periplasmic substrate-binding subunit; branched chain amino acid ABC transporter substrate-binding protein complement(976991..978280) Rhodobacter sphaeroides ATCC 17029 4895242 YP_001042834.1 CDS Rsph17029_0951 NC_009049.1 978341 979417 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_2276 ABC branched amino acid transporter family, inner membrane subunit; inner-membrane translocator complement(978341..979417) Rhodobacter sphaeroides ATCC 17029 4896792 YP_001042835.1 CDS Rsph17029_0952 NC_009049.1 979421 980410 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_2277 ABC branched amino acid transporter family, inner membrane subunit; inner-membrane translocator complement(979421..980410) Rhodobacter sphaeroides ATCC 17029 4895758 YP_001042836.1 CDS Rsph17029_0953 NC_009049.1 980545 981369 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2278 ABC branched amino acid transporter family, ATPase subunit; ABC transporter complement(980545..981369) Rhodobacter sphaeroides ATCC 17029 4896456 YP_001042837.1 CDS Rsph17029_0954 NC_009049.1 981366 983327 R PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_2279 long chain acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(981366..983327) Rhodobacter sphaeroides ATCC 17029 4895369 YP_001042838.1 CDS Rsph17029_0955 NC_009049.1 984025 985947 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2280 PAS sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 984025..985947 Rhodobacter sphaeroides ATCC 17029 4897539 YP_001042839.1 CDS Rsph17029_0956 NC_009049.1 985944 986651 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2281 two-component trancriptional regulator, winged helix family; two component transcriptional regulator 985944..986651 Rhodobacter sphaeroides ATCC 17029 4897936 YP_001042840.1 CDS Rsph17029_0957 NC_009049.1 986662 987840 R TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rsp:RSP_2282 chromate efflux pump, ChrA; chromate transporter complement(986662..987840) Rhodobacter sphaeroides ATCC 17029 4897151 YP_001042841.1 CDS rpsD NC_009049.1 988271 988891 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 988271..988891 Rhodobacter sphaeroides ATCC 17029 4896485 YP_001042842.1 CDS Rsph17029_0959 NC_009049.1 989136 990221 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 989136..990221 Rhodobacter sphaeroides ATCC 17029 4897041 YP_001042843.1 CDS Rsph17029_0960 NC_009049.1 990221 991156 D dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 990221..991156 Rhodobacter sphaeroides ATCC 17029 4896968 YP_001042844.1 CDS Rsph17029_0961 NC_009049.1 991162 992025 D PFAM: Extensin family protein; KEGG: rsp:RSP_2285 conservd hypothetical protein; extensin family protein 991162..992025 Rhodobacter sphaeroides ATCC 17029 4895133 YP_001042845.1 CDS Rsph17029_0962 NC_009049.1 992028 993023 R KEGG: rsp:RSP_2286 hypothetical protein; hypothetical protein complement(992028..993023) Rhodobacter sphaeroides ATCC 17029 4895250 YP_001042846.1 CDS Rsph17029_0963 NC_009049.1 993084 993632 D PFAM: ChaC family protein; KEGG: rsp:RSP_2287 ChaC-like protein; ChaC family protein 993084..993632 Rhodobacter sphaeroides ATCC 17029 4896283 YP_001042847.1 CDS Rsph17029_0964 NC_009049.1 993706 994881 D KEGG: rsp:RSP_2288 hypothetical protein; hypothetical protein 993706..994881 Rhodobacter sphaeroides ATCC 17029 4896565 YP_001042848.1 CDS Rsph17029_0965 NC_009049.1 994885 996462 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_2289 flagellar motor protein; hypothetical protein 994885..996462 Rhodobacter sphaeroides ATCC 17029 4895264 YP_001042849.1 CDS Rsph17029_0966 NC_009049.1 996893 997342 R hypothetical protein complement(996893..997342) Rhodobacter sphaeroides ATCC 17029 4895525 YP_001042850.1 CDS Rsph17029_0967 NC_009049.1 997369 997716 R KEGG: rru:Rru_A0676 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 complement(997369..997716) Rhodobacter sphaeroides ATCC 17029 4895134 YP_001042851.1 CDS Rsph17029_0968 NC_009049.1 998202 1000517 R KEGG: rsp:RSP_2293 chaperonin ClpA/B; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(998202..1000517) Rhodobacter sphaeroides ATCC 17029 4897277 YP_001042852.1 CDS Rsph17029_0969 NC_009049.1 1000684 1001451 R PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2294 putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein; hydroxyacylglutathione hydrolase complement(1000684..1001451) Rhodobacter sphaeroides ATCC 17029 4897105 YP_001042853.1 CDS Rsph17029_0970 NC_009049.1 1001513 1002301 D KEGG: rsp:RSP_2295 hypothetical protein; hypothetical protein 1001513..1002301 Rhodobacter sphaeroides ATCC 17029 4897025 YP_001042854.1 CDS Rsph17029_0971 NC_009049.1 1002604 1003164 D TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+-transporting two-sector ATPase, delta (OSCP) subunit; KEGG: rsp:RSP_2296 ATPase, delta (OSCP) subunit; ATP synthase F1 subunit delta 1002604..1003164 Rhodobacter sphaeroides ATCC 17029 4896960 YP_001042855.1 CDS Rsph17029_0972 NC_009049.1 1003165 1004703 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1003165..1004703 Rhodobacter sphaeroides ATCC 17029 4896512 YP_001042856.1 CDS Rsph17029_0973 NC_009049.1 1004726 1005595 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1004726..1005595 Rhodobacter sphaeroides ATCC 17029 4895592 YP_001042857.1 CDS Rsph17029_0974 NC_009049.1 1005613 1007040 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1005613..1007040 Rhodobacter sphaeroides ATCC 17029 4895212 YP_001042858.1 CDS atpC NC_009049.1 1007050 1007448 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 1007050..1007448 Rhodobacter sphaeroides ATCC 17029 4896183 YP_001042859.1 CDS Rsph17029_0976 NC_009049.1 1007881 1008900 R KEGG: rsp:RSP_2301 phosphoribosyl pyrophosphate synthetase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(1007881..1008900) Rhodobacter sphaeroides ATCC 17029 4896085 YP_001042860.1 CDS Rsph17029_0977 NC_009049.1 1009032 1010057 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_2302 putative low specificity L-threonine aldolase; threonine aldolase complement(1009032..1010057) Rhodobacter sphaeroides ATCC 17029 4896516 YP_001042861.1 CDS Rsph17029_0978 NC_009049.1 1010057 1010518 R PFAM: protein of unknown function UPF0153; KEGG: rsp:RSP_2303 hypothetical protein; hypothetical protein complement(1010057..1010518) Rhodobacter sphaeroides ATCC 17029 4896957 YP_001042862.1 CDS Rsph17029_0979 NC_009049.1 1010558 1011478 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rsp:RSP_2304 riboflavin kinase / FAD synthetase = FMN adenylyltransferase, RibF; riboflavin biosynthesis protein RibF complement(1010558..1011478) Rhodobacter sphaeroides ATCC 17029 4896524 YP_001042863.1 CDS Rsph17029_0980 NC_009049.1 1011506 1011949 R PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_2305 MaoC family protein; dehydratase complement(1011506..1011949) Rhodobacter sphaeroides ATCC 17029 4897150 YP_001042864.1 CDS Rsph17029_0981 NC_009049.1 1012175 1013068 R TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_2306 putative HAD superfamily protein; HAD family hydrolase complement(1012175..1013068) Rhodobacter sphaeroides ATCC 17029 4897280 YP_001042865.1 CDS Rsph17029_0982 NC_009049.1 1013219 1014136 R catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase complement(1013219..1014136) Rhodobacter sphaeroides ATCC 17029 4895468 YP_001042866.1 CDS Rsph17029_0983 NC_009049.1 1014525 1015580 R PFAM: GumN family protein; KEGG: rsp:RSP_2309 hypothetical protein; GumN family protein complement(1014525..1015580) Rhodobacter sphaeroides ATCC 17029 4895406 YP_001042867.1 CDS groES NC_009049.1 1015698 1015985 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1015698..1015985 Rhodobacter sphaeroides ATCC 17029 4895556 YP_001042868.1 CDS groEL NC_009049.1 1016081 1017724 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 1016081..1017724 Rhodobacter sphaeroides ATCC 17029 4896901 YP_001042869.1 CDS Rsph17029_0986 NC_009049.1 1017993 1018604 R PFAM: protein of unknown function DUF1058; KEGG: rsp:RSP_2312 hypothetical protein; hypothetical protein complement(1017993..1018604) Rhodobacter sphaeroides ATCC 17029 4895838 YP_001042870.1 CDS Rsph17029_0987 NC_009049.1 1018702 1019688 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_2313 2-hydroxyacid dehydrogenase; glyoxylate reductase 1018702..1019688 Rhodobacter sphaeroides ATCC 17029 4895653 YP_001042871.1 CDS Rsph17029_0988 NC_009049.1 1020009 1020827 D PFAM: aldo/keto reductase; KEGG: rsp:RSP_2314 oxidoreductase, chromogranin/secretogranin; 2,5-didehydrogluconate reductase 1020009..1020827 Rhodobacter sphaeroides ATCC 17029 4895180 YP_001042872.1 CDS Rsph17029_0989 NC_009049.1 1020917 1021222 D KEGG: rsp:RSP_2315 hypothetical protein; hypothetical protein 1020917..1021222 Rhodobacter sphaeroides ATCC 17029 4896958 YP_001042873.1 CDS Rsph17029_0990 NC_009049.1 1021396 1022637 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2316 D-amino acid dehydrogenase; D-amino-acid dehydrogenase complement(1021396..1022637) Rhodobacter sphaeroides ATCC 17029 4897241 YP_001042874.1 CDS Rsph17029_0991 NC_009049.1 1022684 1023829 R PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_2317 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1022684..1023829) Rhodobacter sphaeroides ATCC 17029 4897115 YP_001042875.1 CDS Rsph17029_0992 NC_009049.1 1023826 1025214 R PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2318 putative aldehyde dehydrogenase; aldehyde dehydrogenase complement(1023826..1025214) Rhodobacter sphaeroides ATCC 17029 4895734 YP_001042876.1 CDS Rsph17029_0993 NC_009049.1 1025227 1026606 R PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_2319 glutamine synthetase class-I; glutamate--ammonia ligase complement(1025227..1026606) Rhodobacter sphaeroides ATCC 17029 4897319 YP_001042877.1 CDS Rsph17029_0994 NC_009049.1 1026682 1027719 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_2320 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit complement(1026682..1027719) Rhodobacter sphaeroides ATCC 17029 4897275 YP_001042878.1 CDS Rsph17029_0995 NC_009049.1 1027776 1029101 R PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_2321 putative TRAP-T family transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM complement(1027776..1029101) Rhodobacter sphaeroides ATCC 17029 4896560 YP_001042879.1 CDS Rsph17029_0996 NC_009049.1 1029101 1029607 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_2322 TRAP-T family transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ complement(1029101..1029607) Rhodobacter sphaeroides ATCC 17029 4897345 YP_001042880.1 CDS Rsph17029_0997 NC_009049.1 1029612 1030376 R PFAM: N-formylglutamate amidohydrolase; KEGG: rsp:RSP_2323 hypothetical protein; N-formylglutamate amidohydrolase complement(1029612..1030376) Rhodobacter sphaeroides ATCC 17029 4895843 YP_001042881.1 CDS Rsph17029_0998 NC_009049.1 1030551 1031417 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rsp:RSP_2324 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1030551..1031417 Rhodobacter sphaeroides ATCC 17029 4895565 YP_001042882.1 CDS Rsph17029_0999 NC_009049.1 1031597 1032736 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: rsp:RSP_2325 RodA, rod cell shape determining protein; rod shape-determining protein RodA complement(1031597..1032736) Rhodobacter sphaeroides ATCC 17029 4897738 YP_001042883.1 CDS Rsph17029_1000 NC_009049.1 1032744 1034690 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rsp:RSP_2326 cell division protein FtsI; peptidoglycan glycosyltransferase complement(1032744..1034690) Rhodobacter sphaeroides ATCC 17029 4896509 YP_001042884.1 CDS Rsph17029_1001 NC_009049.1 1034687 1035226 R KEGG: rsp:RSP_2327 putative rod shape-determining protein MreD; putative rod shape-determining protein MreD complement(1034687..1035226) Rhodobacter sphaeroides ATCC 17029 4896302 YP_001042885.1 CDS Rsph17029_1002 NC_009049.1 1035219 1036121 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1035219..1036121) Rhodobacter sphaeroides ATCC 17029 4895364 YP_001042886.1 CDS Rsph17029_1003 NC_009049.1 1036155 1037192 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1036155..1037192) Rhodobacter sphaeroides ATCC 17029 4897597 YP_001042887.1 CDS Rsph17029_1004 NC_009049.1 1037541 1038497 D KEGG: rsp:RSP_6044 possible serine/alanine racemase VanTc3; putative serine/alanine racemase VanTc3 1037541..1038497 Rhodobacter sphaeroides ATCC 17029 4896927 YP_001042888.1 CDS Rsph17029_1005 NC_009049.1 1038646 1040235 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(1038646..1040235) Rhodobacter sphaeroides ATCC 17029 4896360 YP_001042889.1 CDS Rsph17029_1006 NC_009049.1 1040700 1041158 D TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: rsp:RSP_2331 PpaZ, a novel pseudoazurin precursor (blue copper protein); pseudoazurin 1040700..1041158 Rhodobacter sphaeroides ATCC 17029 4895879 YP_001042890.1 CDS Rsph17029_1007 NC_009049.1 1041655 1043160 R PFAM: MORN repeat-containing protein; KEGG: rsp:RSP_2332 hypothetical protein; MORN repeat-containing protein complement(1041655..1043160) Rhodobacter sphaeroides ATCC 17029 4895672 YP_001042891.1 CDS nadE NC_009049.1 1043342 1045006 D NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1043342..1045006 Rhodobacter sphaeroides ATCC 17029 4896288 YP_001042892.1 CDS Rsph17029_1009 NC_009049.1 1045112 1046056 R PFAM: PfkB domain protein; KEGG: rsp:RSP_2334 carbohydrate kinase, PfkB; ribokinase-like domain-containing protein complement(1045112..1046056) Rhodobacter sphaeroides ATCC 17029 4895935 YP_001042893.1 CDS Rsph17029_1010 NC_009049.1 1046203 1046796 D PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: rsp:RSP_2335 trp repressor binding protein WrbA, putative; flavodoxin/nitric oxide synthase 1046203..1046796 Rhodobacter sphaeroides ATCC 17029 4897192 YP_001042894.1 CDS Rsph17029_1011 NC_009049.1 1046821 1047120 R KEGG: rsp:RSP_6045 hypothetical protein; hypothetical protein complement(1046821..1047120) Rhodobacter sphaeroides ATCC 17029 4898058 YP_001042895.1 CDS Rsph17029_1012 NC_009049.1 1047192 1047923 D PFAM: peptidase M48, Ste24p; KEGG: rsp:RSP_2336 hypothetical protein; peptidase M48, Ste24p 1047192..1047923 Rhodobacter sphaeroides ATCC 17029 4896860 YP_001042896.1 CDS Rsph17029_1013 NC_009049.1 1047998 1048249 D KEGG: rsp:RSP_2337 hypothetical protein; hypothetical protein 1047998..1048249 Rhodobacter sphaeroides ATCC 17029 4898032 YP_001042897.1 CDS Rsph17029_1014 NC_009049.1 1048335 1048697 D PFAM: PRC-barrel domain protein; KEGG: rsp:RSP_2338 hypothetical protein; PRC-barrel domain-containing protein 1048335..1048697 Rhodobacter sphaeroides ATCC 17029 4897056 YP_001042898.1 CDS rimO NC_009049.1 1048915 1050282 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase complement(1048915..1050282) Rhodobacter sphaeroides ATCC 17029 4897455 YP_001042899.1 CDS Rsph17029_1016 NC_009049.1 1050386 1051564 R PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_2341 hypothetical protein; hypothetical protein complement(1050386..1051564) Rhodobacter sphaeroides ATCC 17029 4895557 YP_001042900.1 CDS Rsph17029_1017 NC_009049.1 1051593 1052096 R catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase complement(1051593..1052096) Rhodobacter sphaeroides ATCC 17029 4895164 YP_001042901.1 CDS Rsph17029_1018 NC_009049.1 1052106 1052720 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_2343 putative threonine efflux protein, RhtB family; lysine exporter protein LysE/YggA complement(1052106..1052720) Rhodobacter sphaeroides ATCC 17029 4896857 YP_001042902.1 CDS Rsph17029_1019 NC_009049.1 1052722 1053546 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(1052722..1053546) Rhodobacter sphaeroides ATCC 17029 4895339 YP_001042903.1 CDS Rsph17029_1020 NC_009049.1 1053689 1054291 D KEGG: rsp:RSP_2345 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase 1053689..1054291 Rhodobacter sphaeroides ATCC 17029 4897518 YP_001042904.1 CDS Rsph17029_1021 NC_009049.1 1054408 1054950 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_2346 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1054408..1054950 Rhodobacter sphaeroides ATCC 17029 4895568 YP_001042905.1 CDS Rsph17029_1022 NC_009049.1 1054911 1055426 D PFAM: protein of unknown function DUF192; KEGG: rsp:RSP_2347 hypothetical protein; hypothetical protein 1054911..1055426 Rhodobacter sphaeroides ATCC 17029 4895446 YP_001042906.1 CDS Rsph17029_1023 NC_009049.1 1056047 1056883 D PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rsp:RSP_2362 transcriptional regulator, GntR family; UbiC transcription regulator-associated domain-containing protein 1056047..1056883 Rhodobacter sphaeroides ATCC 17029 4897804 YP_001042907.1 CDS Rsph17029_1024 NC_009049.1 1057077 1057841 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2363 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1057077..1057841 Rhodobacter sphaeroides ATCC 17029 4898024 YP_001042908.1 CDS Rsph17029_1025 NC_009049.1 1057846 1058502 D PFAM: class II aldolase/adducin family protein; KEGG: rsp:RSP_2364 L-fuculose phosphate aldolase (class II); L-fuculose phosphate aldolase 1057846..1058502 Rhodobacter sphaeroides ATCC 17029 4895602 YP_001042909.1 CDS Rsph17029_1026 NC_009049.1 1058568 1059530 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_2365 ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; periplasmic binding protein/LacI transcriptional regulator 1058568..1059530 Rhodobacter sphaeroides ATCC 17029 4895343 YP_001042910.1 CDS Rsph17029_1027 NC_009049.1 1059716 1061224 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2366 ABC sugar (ribose) transporter, fused ATPase subunits; ABC transporter 1059716..1061224 Rhodobacter sphaeroides ATCC 17029 4895558 YP_001042911.1 CDS Rsph17029_1028 NC_009049.1 1061225 1062235 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_2368 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 1061225..1062235 Rhodobacter sphaeroides ATCC 17029 4895108 YP_001042912.1 CDS Rsph17029_1029 NC_009049.1 1062239 1063216 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_2367 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 1062239..1063216 Rhodobacter sphaeroides ATCC 17029 4895206 YP_001042913.1 CDS Rsph17029_1030 NC_009049.1 1063232 1064182 D PFAM: PfkB domain protein; KEGG: rsp:RSP_2370 putative sugar kinase; ribokinase-like domain-containing protein 1063232..1064182 Rhodobacter sphaeroides ATCC 17029 4895377 YP_001042914.1 CDS Rsph17029_1031 NC_009049.1 1064193 1064939 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2371 3-oxoacyl-(acyl-carrier protein) reductase / short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1064193..1064939 Rhodobacter sphaeroides ATCC 17029 4895487 YP_001042915.1 CDS Rsph17029_1032 NC_009049.1 1065193 1066611 D PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2372 aldehyde dehydrogenase (NAD-dependent); aldehyde dehydrogenase 1065193..1066611 Rhodobacter sphaeroides ATCC 17029 4895539 YP_001042916.1 CDS Rsph17029_1033 NC_009049.1 1066608 1067777 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rsp:RSP_2373 putative transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter 1066608..1067777 Rhodobacter sphaeroides ATCC 17029 4895573 YP_001042917.1 CDS Rsph17029_1034 NC_009049.1 1068010 1068534 D KEGG: rsp:RSP_2374 hypothetical protein; hypothetical protein 1068010..1068534 Rhodobacter sphaeroides ATCC 17029 4895751 YP_001042918.1 CDS Rsph17029_1035 NC_009049.1 1068621 1070066 D PFAM: protein of unknown function UPF0061; KEGG: rsp:RSP_2375 hypothetical protein; hypothetical protein 1068621..1070066 Rhodobacter sphaeroides ATCC 17029 4895827 YP_001042919.1 CDS Rsph17029_1036 NC_009049.1 1070111 1071301 D catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 1070111..1071301 Rhodobacter sphaeroides ATCC 17029 4896142 YP_001042920.1 CDS tdh NC_009049.1 1071301 1072326 D converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 1071301..1072326 Rhodobacter sphaeroides ATCC 17029 4896461 YP_001042921.1 CDS Rsph17029_1038 NC_009049.1 1072518 1073840 R KEGG: rsp:RSP_2378 putative fatty acid beta hydroxylase (cytochrome P450); putative fatty acid beta hydroxylase (cytochrome P450) complement(1072518..1073840) Rhodobacter sphaeroides ATCC 17029 4896712 YP_001042922.1 CDS Rsph17029_1039 NC_009049.1 1073951 1074205 R KEGG: rsp:RSP_2379 hypothetical protein; hypothetical protein complement(1073951..1074205) Rhodobacter sphaeroides ATCC 17029 4896884 YP_001042923.1 CDS Rsph17029_1040 NC_009049.1 1074241 1076373 R PFAM: Catalase domain protein; KEGG: rsp:RSP_2380 catalase; catalase complement(1074241..1076373) Rhodobacter sphaeroides ATCC 17029 4896950 YP_001042924.1 CDS Rsph17029_1041 NC_009049.1 1076495 1077022 R KEGG: rsp:RSP_6048 hypothetical protein; hypothetical protein complement(1076495..1077022) Rhodobacter sphaeroides ATCC 17029 4897351 YP_001042925.1 CDS Rsph17029_1042 NC_009049.1 1077141 1077695 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1077141..1077695 Rhodobacter sphaeroides ATCC 17029 4897498 YP_001042926.1 CDS Rsph17029_1043 NC_009049.1 1077768 1077929 D hypothetical protein 1077768..1077929 Rhodobacter sphaeroides ATCC 17029 4897903 YP_001042927.1 CDS Rsph17029_1044 NC_009049.1 1078119 1079228 R KEGG: rsp:RSP_2382 hypothetical protein; hypothetical protein complement(1078119..1079228) Rhodobacter sphaeroides ATCC 17029 4895528 YP_001042928.1 CDS Rsph17029_1045 NC_009049.1 1079228 1079629 R PFAM: protein of unknown function DUF1469; KEGG: rsp:RSP_2383 putative integral membrane protein; hypothetical protein complement(1079228..1079629) Rhodobacter sphaeroides ATCC 17029 4898012 YP_001042929.1 CDS Rsph17029_1046 NC_009049.1 1079616 1080440 R KEGG: rsp:RSP_6050 hypothetical protein; hypothetical protein complement(1079616..1080440) Rhodobacter sphaeroides ATCC 17029 4896468 YP_001042930.1 CDS Rsph17029_1047 NC_009049.1 1080580 1081140 D KEGG: rsp:RSP_2384 hypothetical protein; hypothetical protein 1080580..1081140 Rhodobacter sphaeroides ATCC 17029 4895966 YP_001042931.1 CDS Rsph17029_1048 NC_009049.1 1081220 1081582 R KEGG: rsp:RSP_2385 hypothetical protein; hypothetical protein complement(1081220..1081582) Rhodobacter sphaeroides ATCC 17029 4897249 YP_001042932.1 CDS Rsph17029_1049 NC_009049.1 1081984 1082364 D PFAM: phosphate-starvation-inducible E; KEGG: rsp:RSP_6224 hypothetical protein; phosphate-starvation-inducible E 1081984..1082364 Rhodobacter sphaeroides ATCC 17029 4897669 YP_001042933.1 CDS mtnA NC_009049.1 1082367 1083461 R isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase complement(1082367..1083461) Rhodobacter sphaeroides ATCC 17029 4897038 YP_001042934.1 CDS Rsph17029_1051 NC_009049.1 1083573 1084007 R PFAM: protein of unknown function DUF1178; KEGG: rsp:RSP_2387 hypothetical protein; hypothetical protein complement(1083573..1084007) Rhodobacter sphaeroides ATCC 17029 4895334 YP_001042935.1 CDS Rsph17029_1052 NC_009049.1 1084079 1084579 R PFAM: NUDIX hydrolase; KEGG: rsp:RSP_2388 hypothetical protein; NUDIX hydrolase complement(1084079..1084579) Rhodobacter sphaeroides ATCC 17029 4897953 YP_001042936.1 CDS Rsph17029_1053 NC_009049.1 1084864 1085394 D PFAM: glutathione peroxidase; KEGG: rsp:RSP_2389 putative glutathione peroxidase; glutathione peroxidase 1084864..1085394 Rhodobacter sphaeroides ATCC 17029 4898090 YP_001042937.1 CDS Rsph17029_1054 NC_009049.1 1085423 1086532 D PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_2390 putative acetoin utilization protein; histone deacetylase superfamily protein 1085423..1086532 Rhodobacter sphaeroides ATCC 17029 4895117 YP_001042938.1 CDS Rsph17029_1055 NC_009049.1 1086529 1087083 D TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: rsp:RSP_2391 2'-5' RNA ligase; 2'-5' RNA ligase 1086529..1087083 Rhodobacter sphaeroides ATCC 17029 4895813 YP_001042939.1 CDS Rsph17029_1056 NC_009049.1 1087094 1087651 R PFAM: NnrUfamily protein; KEGG: rsp:RSP_2392 putative membrane protein, similar to periplasmic nitrate reductase NnuR; NnrU family protein complement(1087094..1087651) Rhodobacter sphaeroides ATCC 17029 4896059 YP_001042940.1 CDS Rsph17029_1057 NC_009049.1 1087950 1089227 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rsp:RSP_2394 putative 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase); 3-deoxy-D-manno-octulosonic-acid transferase complement(1087950..1089227) Rhodobacter sphaeroides ATCC 17029 4895067 YP_001042941.1 CDS Rsph17029_1058 NC_009049.1 1089337 1090380 D PFAM: Di-haem cytochrome c peroxidase; KEGG: rsp:RSP_2395 BccP, cytochrome c peroxidase; cytochrome-c peroxidase 1089337..1090380 Rhodobacter sphaeroides ATCC 17029 4896048 YP_001042942.1 CDS Rsph17029_1059 NC_009049.1 1090455 1091456 R KEGG: rsp:RSP_2396 hypothetical protein; hypothetical protein complement(1090455..1091456) Rhodobacter sphaeroides ATCC 17029 4895694 YP_001042943.1 CDS Rsph17029_1060 NC_009049.1 1091748 1092773 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2397 ABC putrescine transporter, periplasmic substrate-binding subunit; extracellular solute-binding protein complement(1091748..1092773) Rhodobacter sphaeroides ATCC 17029 4895738 YP_001042944.1 CDS Rsph17029_1061 NC_009049.1 1092801 1093601 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2398 ABC putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1092801..1093601) Rhodobacter sphaeroides ATCC 17029 4895711 YP_001042945.1 CDS Rsph17029_1062 NC_009049.1 1093594 1094487 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2399 ABC putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1093594..1094487) Rhodobacter sphaeroides ATCC 17029 4895078 YP_001042946.1 CDS Rsph17029_1063 NC_009049.1 1094489 1095553 R KEGG: rsp:RSP_2400 ABC putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(1094489..1095553) Rhodobacter sphaeroides ATCC 17029 4895746 YP_001042947.1 CDS Rsph17029_1064 NC_009049.1 1095584 1097071 R PFAM: Amidase; KEGG: rsp:RSP_2401 putative 6-aminohexanoate-cyclic-dimer hydrolase; amidase complement(1095584..1097071) Rhodobacter sphaeroides ATCC 17029 4896522 YP_001042948.1 CDS Rsph17029_1065 NC_009049.1 1097531 1099366 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_2402 putative TonB dependent vitamin B12 outer membrane receptor; TonB-dependent receptor 1097531..1099366 Rhodobacter sphaeroides ATCC 17029 4895788 YP_001042949.1 CDS Rsph17029_1066 NC_009049.1 1099353 1100213 D PFAM: periplasmic binding protein; KEGG: rsp:RSP_2403 ABC cobalamin/Fe3+-siderophore transporter, periplasmic substrate-binding subunit; periplasmic binding protein 1099353..1100213 Rhodobacter sphaeroides ATCC 17029 4895747 YP_001042950.1 CDS Rsph17029_1067 NC_009049.1 1100210 1101199 D PFAM: transport system permease protein; KEGG: rsp:RSP_2404 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; transport system permease 1100210..1101199 Rhodobacter sphaeroides ATCC 17029 4897223 YP_001042951.1 CDS Rsph17029_1068 NC_009049.1 1101196 1101948 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2405 ABC cobalamin/Fe3+-siderophore transporter, ATPase subunit; ABC transporter 1101196..1101948 Rhodobacter sphaeroides ATCC 17029 4897620 YP_001042952.1 CDS Rsph17029_1069 NC_009049.1 1101945 1102604 D PFAM: protein of unknown function DUF105; KEGG: rsp:RSP_2406 hypothetical protein; hypothetical protein 1101945..1102604 Rhodobacter sphaeroides ATCC 17029 4897259 YP_001042953.1 CDS Rsph17029_1070 NC_009049.1 1102852 1104579 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2407 periplasmic sensor hybrid histidine kinase; integral membrane sensor hybrid histidine kinase complement(1102852..1104579) Rhodobacter sphaeroides ATCC 17029 4896826 YP_001042954.1 CDS Rsph17029_1071 NC_009049.1 1104629 1104874 R KEGG: rsp:RSP_2408 hypothetical protein; hypothetical protein complement(1104629..1104874) Rhodobacter sphaeroides ATCC 17029 4896261 YP_001042955.1 CDS Rsph17029_1072 NC_009049.1 1104948 1105997 D KEGG: rsp:RSP_2409 putative pseudouridine synthase, Rlu; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1104948..1105997 Rhodobacter sphaeroides ATCC 17029 4895888 YP_001042956.1 CDS Rsph17029_1073 NC_009049.1 1106158 1107054 D binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 1106158..1107054 Rhodobacter sphaeroides ATCC 17029 4897060 YP_001042957.1 CDS Rsph17029_1074 NC_009049.1 1107599 1108399 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2411 hypothetical protein; type 12 methyltransferase complement(1107599..1108399) Rhodobacter sphaeroides ATCC 17029 4897315 YP_001042958.1 CDS Rsph17029_1075 NC_009049.1 1108484 1110304 R TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: rsp:RSP_2412 oligoendopeptidase F; pepF/M3 family oligoendopeptidase complement(1108484..1110304) Rhodobacter sphaeroides ATCC 17029 4897641 YP_001042959.1 CDS Rsph17029_1076 NC_009049.1 1110476 1112077 R catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase complement(1110476..1112077) Rhodobacter sphaeroides ATCC 17029 4897401 YP_001042960.1 CDS Rsph17029_1077 NC_009049.1 1112074 1113225 R KEGG: rsp:RSP_2414 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor complement(1112074..1113225) Rhodobacter sphaeroides ATCC 17029 4896655 YP_001042961.1 CDS Rsph17029_1078 NC_009049.1 1113395 1114813 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rsp:RSP_2415 hypothetical protein; hypothetical protein 1113395..1114813 Rhodobacter sphaeroides ATCC 17029 4896473 YP_001042962.1 CDS Rsph17029_1079 NC_009049.1 1114821 1115771 D PFAM: protein of unknown function DUF403; KEGG: rsp:RSP_2416 hypothetical protein; hypothetical protein 1114821..1115771 Rhodobacter sphaeroides ATCC 17029 4897088 YP_001042963.1 CDS Rsph17029_1080 NC_009049.1 1115768 1116577 D PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_2417 hypothetical protein; transglutaminase domain-containing protein 1115768..1116577 Rhodobacter sphaeroides ATCC 17029 4896953 YP_001042964.1 CDS Rsph17029_1081 NC_009049.1 1116609 1117334 D PFAM: 20S proteasome, A and B subunits; KEGG: rsp:RSP_2420 putative proteasome-type protease; 20S proteasome, A and B subunits 1116609..1117334 Rhodobacter sphaeroides ATCC 17029 4895784 YP_001042965.1 CDS Rsph17029_1082 NC_009049.1 1117324 1118277 R PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_2418 putative esterase/lipase/thioesterase; alpha/beta hydrolase complement(1117324..1118277) Rhodobacter sphaeroides ATCC 17029 4895772 YP_001042966.1 CDS Rsph17029_1083 NC_009049.1 1118274 1118558 R PFAM: Sterol-binding domain protein; KEGG: rsp:RSP_2419 hypothetical protein; sterol-binding domain-containing protein complement(1118274..1118558) Rhodobacter sphaeroides ATCC 17029 4895074 YP_001042967.1 CDS Rsph17029_1084 NC_009049.1 1118679 1119206 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_2421 hypothetical protein; hypothetical protein 1118679..1119206 Rhodobacter sphaeroides ATCC 17029 4897095 YP_001042968.1 CDS Rsph17029_1086 NC_009049.1 1119745 1122105 D PFAM: helicase domain protein; KEGG: rsp:RSP_2422 putative ATP-dependent helicase, MgpS; helicase domain-containing protein 1119745..1122105 Rhodobacter sphaeroides ATCC 17029 4897182 YP_001042969.1 CDS Rsph17029_1087 NC_009049.1 1122111 1122407 D PFAM: RNA-binding S4 domain protein; KEGG: rsp:RSP_2423 putative heat shock protein 15 (HSP15); RNA-binding S4 domain-containing protein 1122111..1122407 Rhodobacter sphaeroides ATCC 17029 4895086 YP_001042970.1 CDS Rsph17029_1088 NC_009049.1 1122462 1122800 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_2424 ferredoxin II; 4Fe-4S ferredoxin 1122462..1122800 Rhodobacter sphaeroides ATCC 17029 4895087 YP_001042971.1 CDS Rsph17029_1089 NC_009049.1 1123080 1123589 D PFAM: transcription factor CarD; KEGG: rsp:RSP_2425 putative CarD-like transcriptional regulator; CarD family transcriptional regulator 1123080..1123589 Rhodobacter sphaeroides ATCC 17029 4897102 YP_001042972.1 CDS Rsph17029_1090 NC_009049.1 1123778 1124527 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rsp:RSP_2427 putative cobalamin (5'-phosphate) synthase; cobalamin 5'-phosphate synthase complement(1123778..1124527) Rhodobacter sphaeroides ATCC 17029 4897322 YP_001042973.1 CDS cobT NC_009049.1 1124609 1125625 D catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1124609..1125625 Rhodobacter sphaeroides ATCC 17029 4896573 YP_001042974.1 CDS Rsph17029_1092 NC_009049.1 1125681 1127609 R PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rsp:RSP_2429 glutathione-regulated potassium-efflux system protein, KefB; sodium/hydrogen exchanger complement(1125681..1127609) Rhodobacter sphaeroides ATCC 17029 4897581 YP_001042975.1 CDS Rsph17029_1093 NC_009049.1 1127724 1130600 R KEGG: rsp:RSP_6052 hypothetical protein; hypothetical protein complement(1127724..1130600) Rhodobacter sphaeroides ATCC 17029 4897543 YP_001042976.1 CDS Rsph17029_1094 NC_009049.1 1130764 1131456 D PFAM: protein of unknown function DUF541; KEGG: rsp:RSP_2430 hypothetical protein; hypothetical protein 1130764..1131456 Rhodobacter sphaeroides ATCC 17029 4895088 YP_001042977.1 CDS Rsph17029_1095 NC_009049.1 1131502 1132794 R KEGG: rsp:RSP_2431 putative O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(1131502..1132794) Rhodobacter sphaeroides ATCC 17029 4895095 YP_001042978.1 CDS Rsph17029_1096 NC_009049.1 1133040 1133387 R KEGG: rsp:RSP_2432 hypothetical protein; hypothetical protein complement(1133040..1133387) Rhodobacter sphaeroides ATCC 17029 4895102 YP_001042979.1 CDS Rsph17029_1097 NC_009049.1 1133384 1133773 R PFAM: response regulator receiver; KEGG: rsp:RSP_2433 chemotaxis response regulator, CheY2; response regulator receiver protein complement(1133384..1133773) Rhodobacter sphaeroides ATCC 17029 4897064 YP_001042980.1 CDS Rsph17029_1098 NC_009049.1 1133748 1134665 R PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_2434 putative MCP methyltransferase, CheR1; protein-glutamate O-methyltransferase complement(1133748..1134665) Rhodobacter sphaeroides ATCC 17029 4895106 YP_001042981.1 CDS Rsph17029_1099 NC_009049.1 1134662 1135120 R PFAM: CheW domain protein; KEGG: rsp:RSP_2435 putative chemotaxis scaffold protein, CheW1; putative CheW protein complement(1134662..1135120) Rhodobacter sphaeroides ATCC 17029 4895107 YP_001042982.1 CDS Rsph17029_1100 NC_009049.1 1135122 1137182 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rsp:RSP_2436 chemotaxis histidine protein kinase, CheA1; CheA signal transduction histidine kinase complement(1135122..1137182) Rhodobacter sphaeroides ATCC 17029 4895109 YP_001042983.1 CDS Rsph17029_1101 NC_009049.1 1137190 1137558 R PFAM: response regulator receiver; KEGG: rsp:RSP_2437 chemotaxis response regulator, CheY1; response regulator receiver protein complement(1137190..1137558) Rhodobacter sphaeroides ATCC 17029 4895115 YP_001042984.1 CDS Rsph17029_1102 NC_009049.1 1137549 1137833 R KEGG: rsp:RSP_2438 putative CheX protein; putative CheX protein complement(1137549..1137833) Rhodobacter sphaeroides ATCC 17029 4895121 YP_001042985.1 CDS Rsph17029_1103 NC_009049.1 1137830 1138429 R catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD complement(1137830..1138429) Rhodobacter sphaeroides ATCC 17029 4895120 YP_001042986.1 CDS Rsph17029_1104 NC_009049.1 1138487 1140865 R PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_2440 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1138487..1140865) Rhodobacter sphaeroides ATCC 17029 4895119 YP_001042987.1 CDS Rsph17029_1105 NC_009049.1 1140972 1142759 R KEGG: rsp:RSP_2441 putative transducer like protein; putative transducer like protein complement(1140972..1142759) Rhodobacter sphaeroides ATCC 17029 4895135 YP_001042988.1 CDS Rsph17029_1106 NC_009049.1 1142863 1144545 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_2442 methyl accepting chemotaxis protein, McpB; methyl-accepting chemotaxis sensory transducer complement(1142863..1144545) Rhodobacter sphaeroides ATCC 17029 4895129 YP_001042989.1 CDS Rsph17029_1107 NC_009049.1 1144634 1145002 R PFAM: response regulator receiver; KEGG: rsp:RSP_2443 putative chemotaxis response regulator, CheY5; response regulator receiver protein complement(1144634..1145002) Rhodobacter sphaeroides ATCC 17029 4895131 YP_001042990.1 CDS Rsph17029_1108 NC_009049.1 1144999 1145382 R KEGG: rsp:RSP_2444 hypothetical protein; hypothetical protein complement(1144999..1145382) Rhodobacter sphaeroides ATCC 17029 4895126 YP_001042991.1 CDS Rsph17029_1109 NC_009049.1 1145466 1147613 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_2445 putative alpha amylase; alpha amylase 1145466..1147613 Rhodobacter sphaeroides ATCC 17029 4895151 YP_001042992.1 CDS Rsph17029_1110 NC_009049.1 1147610 1150918 D KEGG: rsp:RSP_2446 putative trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; trehalose synthase 1147610..1150918 Rhodobacter sphaeroides ATCC 17029 4895155 YP_001042993.1 CDS Rsph17029_1111 NC_009049.1 1150915 1153101 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1150915..1153101 Rhodobacter sphaeroides ATCC 17029 4895154 YP_001042994.1 CDS Rsph17029_1112 NC_009049.1 1153098 1155164 D KEGG: rsp:RSP_2449 putative glycosyl hydrolase; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1153098..1155164 Rhodobacter sphaeroides ATCC 17029 4895153 YP_001042995.1 CDS Rsph17029_1113 NC_009049.1 1155161 1156939 D KEGG: rsp:RSP_2450 putative alpha-amylase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 1155161..1156939 Rhodobacter sphaeroides ATCC 17029 4895159 YP_001042996.1 CDS Rsph17029_1114 NC_009049.1 1156936 1158753 D KEGG: rsp:RSP_2451 putative 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1156936..1158753 Rhodobacter sphaeroides ATCC 17029 4895160 YP_001042997.1 CDS Rsph17029_1115 NC_009049.1 1158750 1161365 D KEGG: rsp:RSP_2452 alpha amylase, catalytic domain/subdomain; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; maltooligosyl trehalose synthase 1158750..1161365 Rhodobacter sphaeroides ATCC 17029 4895157 YP_001042998.1 CDS Rsph17029_1116 NC_009049.1 1161424 1162089 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2453 putative oxidoreductase (NAD/NADP dependent); short-chain dehydrogenase/reductase SDR complement(1161424..1162089) Rhodobacter sphaeroides ATCC 17029 4895165 YP_001042999.1 CDS Rsph17029_1117 NC_009049.1 1162210 1163673 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1162210..1163673) Rhodobacter sphaeroides ATCC 17029 4895176 YP_001043000.1 CDS Rsph17029_1118 NC_009049.1 1163758 1164372 R PFAM: Colicin V production protein; KEGG: rsp:RSP_2455 putative colicin V production protein, DedE; colicin V production protein complement(1163758..1164372) Rhodobacter sphaeroides ATCC 17029 4895175 YP_001043001.1 CDS Rsph17029_1119 NC_009049.1 1164391 1165749 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(1164391..1165749) Rhodobacter sphaeroides ATCC 17029 4895174 YP_001043002.1 CDS Rsph17029_1120 NC_009049.1 1165922 1166347 R PFAM: Paraquat-inducible protein A; KEGG: rsp:RSP_2457 hypothetical protein; paraquat-inducible protein A complement(1165922..1166347) Rhodobacter sphaeroides ATCC 17029 4895170 YP_001043003.1 CDS Rsph17029_1121 NC_009049.1 1166348 1167094 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2458 ABC transporter, ATPase subunit; ABC transporter complement(1166348..1167094) Rhodobacter sphaeroides ATCC 17029 4895203 YP_001043004.1 CDS Rsph17029_1122 NC_009049.1 1167091 1167873 R PFAM: protein of unknown function DUF140; KEGG: rsp:RSP_2459 ABC transporter, inner membrane subunit; hypothetical protein complement(1167091..1167873) Rhodobacter sphaeroides ATCC 17029 4895200 YP_001043005.1 CDS Rsph17029_1123 NC_009049.1 1167870 1168919 R KEGG: rsp:RSP_2460 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(1167870..1168919) Rhodobacter sphaeroides ATCC 17029 4895179 YP_001043006.1 CDS Rsph17029_1124 NC_009049.1 1169148 1169885 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_2461 3-oxoacyl-(acyl-carrier protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1169148..1169885 Rhodobacter sphaeroides ATCC 17029 4895215 YP_001043007.1 CDS acpP NC_009049.1 1170064 1170297 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1170064..1170297 Rhodobacter sphaeroides ATCC 17029 4895235 YP_001043008.1 CDS Rsph17029_1126 NC_009049.1 1170794 1172056 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1170794..1172056 Rhodobacter sphaeroides ATCC 17029 4895245 YP_001043009.1 CDS Rsph17029_1127 NC_009049.1 1172056 1173234 D PFAM: aminodeoxychorismate lyase; KEGG: rsp:RSP_2465 hypothetical protein; aminodeoxychorismate lyase 1172056..1173234 Rhodobacter sphaeroides ATCC 17029 4895303 YP_001043010.1 CDS Rsph17029_1128 NC_009049.1 1173306 1173749 D KEGG: rsp:RSP_2466 hypothetical protein; hypothetical protein 1173306..1173749 Rhodobacter sphaeroides ATCC 17029 4895299 YP_001043011.1 CDS Rsph17029_1129 NC_009049.1 1173796 1175040 D PFAM: protein of unknown function DUF264; KEGG: rsp:RSP_2467 putative large terminase; hypothetical protein 1173796..1175040 Rhodobacter sphaeroides ATCC 17029 4895292 YP_001043012.1 CDS Rsph17029_1130 NC_009049.1 1175113 1176285 D TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rsp:RSP_2468 putative portal protein; HK97 family phage portal protein 1175113..1176285 Rhodobacter sphaeroides ATCC 17029 4895275 YP_001043013.1 CDS Rsph17029_1131 NC_009049.1 1176287 1176520 D KEGG: rsp:RSP_2469 hypothetical protein; hypothetical protein 1176287..1176520 Rhodobacter sphaeroides ATCC 17029 4895359 YP_001043014.1 CDS Rsph17029_1132 NC_009049.1 1176525 1177088 D TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: rsp:RSP_2470 putative prohead protease; HK97 family phage prohead protease 1176525..1177088 Rhodobacter sphaeroides ATCC 17029 4895335 YP_001043015.1 CDS Rsph17029_1133 NC_009049.1 1177187 1178350 D TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: rsp:RSP_2471 predicted phage phi-C31 GP36 major capsid-like protein; HK97 family phage major capsid protein 1177187..1178350 Rhodobacter sphaeroides ATCC 17029 4895324 YP_001043016.1 CDS Rsph17029_1134 NC_009049.1 1178445 1179044 D KEGG: rsp:RSP_2472 hypothetical protein; hypothetical protein 1178445..1179044 Rhodobacter sphaeroides ATCC 17029 4895381 YP_001043017.1 CDS Rsph17029_1135 NC_009049.1 1179044 1179379 D TIGRFAM: phage head-tail adaptor, putative; KEGG: rsp:RSP_6053 putative phage tail-head adaptor; phage head-tail adaptor 1179044..1179379 Rhodobacter sphaeroides ATCC 17029 4895367 YP_001043018.1 CDS Rsph17029_1136 NC_009049.1 1179376 1179774 D KEGG: rsp:RSP_6054 hypothetical protein; hypothetical protein 1179376..1179774 Rhodobacter sphaeroides ATCC 17029 4895356 YP_001043019.1 CDS Rsph17029_1137 NC_009049.1 1179812 1180225 D TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rsp:RSP_2473 hypothetical protein; TP901-1 family phage major tail protein 1179812..1180225 Rhodobacter sphaeroides ATCC 17029 4895396 YP_001043020.1 CDS Rsph17029_1138 NC_009049.1 1180225 1180542 D KEGG: rsp:RSP_2474 hypothetical protein; hypothetical protein 1180225..1180542 Rhodobacter sphaeroides ATCC 17029 4895401 YP_001043021.1 CDS Rsph17029_1139 NC_009049.1 1180544 1180744 D KEGG: rsp:RSP_2474 hypothetical protein; hypothetical protein 1180544..1180744 Rhodobacter sphaeroides ATCC 17029 4895398 YP_001043022.1 CDS Rsph17029_1140 NC_009049.1 1180737 1181387 D KEGG: rsp:RSP_2475 putative phage tail minor protein; putative phage tail minor protein 1180737..1181387 Rhodobacter sphaeroides ATCC 17029 4895384 YP_001043023.1 CDS Rsph17029_1141 NC_009049.1 1181397 1182029 D KEGG: rsp:RSP_2476 hypothetical protein; hypothetical protein 1181397..1182029 Rhodobacter sphaeroides ATCC 17029 4895426 YP_001043024.1 CDS Rsph17029_1142 NC_009049.1 1182029 1182913 D KEGG: rsp:RSP_2477 hypothetical protein; hypothetical protein 1182029..1182913 Rhodobacter sphaeroides ATCC 17029 4895450 YP_001043025.1 CDS Rsph17029_1143 NC_009049.1 1182910 1183350 D TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family; KEGG: rsp:RSP_2478 hypothetical protein; NlpC/P60 family phage cell wall peptidase 1182910..1183350 Rhodobacter sphaeroides ATCC 17029 4895447 YP_001043026.1 CDS Rsph17029_1144 NC_009049.1 1183350 1187240 D KEGG: rsp:RSP_2479 putative phage host specificity protein; putative phage host specificity protein 1183350..1187240 Rhodobacter sphaeroides ATCC 17029 4895429 YP_001043027.1 CDS Rsph17029_1145 NC_009049.1 1187244 1187657 D KEGG: rsp:RSP_2480 hypothetical protein; hypothetical protein 1187244..1187657 Rhodobacter sphaeroides ATCC 17029 4895474 YP_001043028.1 CDS Rsph17029_1146 NC_009049.1 1187650 1188456 D KEGG: rsp:RSP_2481 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 1187650..1188456 Rhodobacter sphaeroides ATCC 17029 4895476 YP_001043029.1 CDS Rsph17029_1147 NC_009049.1 1188556 1189884 R KEGG: rsp:RSP_4050 dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(1188556..1189884) Rhodobacter sphaeroides ATCC 17029 4895466 YP_001043030.1 CDS Rsph17029_1148 NC_009049.1 1189895 1191286 R catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta complement(1189895..1191286) Rhodobacter sphaeroides ATCC 17029 4895465 YP_001043031.1 CDS Rsph17029_1149 NC_009049.1 1191300 1192289 R PFAM: dehydrogenase, E1 component; KEGG: rsp:RSP_4047 pyruvate dehydrogenase E1 component, alpha subunit; pyruvate dehydrogenase (acetyl-transferring) complement(1191300..1192289) Rhodobacter sphaeroides ATCC 17029 4895491 YP_001043032.1 CDS Rsph17029_1150 NC_009049.1 1192513 1192815 R PFAM: Septum formation initiator; KEGG: rsp:RSP_4046 hypothetical protein; septum formation initiator complement(1192513..1192815) Rhodobacter sphaeroides ATCC 17029 4895493 YP_001043033.1 CDS Rsph17029_1151 NC_009049.1 1193100 1194029 R catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase complement(1193100..1194029) Rhodobacter sphaeroides ATCC 17029 4895485 YP_001043034.1 CDS pgk NC_009049.1 1194131 1195324 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(1194131..1195324) Rhodobacter sphaeroides ATCC 17029 4895518 YP_001043035.1 CDS Rsph17029_1153 NC_009049.1 1195473 1195982 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rsp:RSP_4043 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 1195473..1195982 Rhodobacter sphaeroides ATCC 17029 4895514 YP_001043036.1 CDS Rsph17029_1154 NC_009049.1 1195972 1196565 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rsp:RSP_4042 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1195972..1196565 Rhodobacter sphaeroides ATCC 17029 4895500 YP_001043037.1 CDS Rsph17029_1155 NC_009049.1 1196805 1198055 R KEGG: rsp:RSP_4041 tyrosyl-tRNA synthetase, class Ib; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase complement(1196805..1198055) Rhodobacter sphaeroides ATCC 17029 4895524 YP_001043038.1 CDS anmK NC_009049.1 1198131 1199246 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1198131..1199246 Rhodobacter sphaeroides ATCC 17029 4895580 YP_001043039.1 CDS Rsph17029_1157 NC_009049.1 1199284 1199706 R PFAM: protein of unknown function DUF985; KEGG: rsp:RSP_2490 hypothetical protein; hypothetical protein complement(1199284..1199706) Rhodobacter sphaeroides ATCC 17029 4895571 YP_001043040.1 CDS Rsph17029_1158 NC_009049.1 1199869 1200105 D KEGG: rsp:RSP_6057 hypothetical protein; hypothetical protein 1199869..1200105 Rhodobacter sphaeroides ATCC 17029 4895595 YP_001043041.1 CDS eno NC_009049.1 1200176 1201453 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(1200176..1201453) Rhodobacter sphaeroides ATCC 17029 4895585 YP_001043042.1 CDS Rsph17029_1160 NC_009049.1 1201488 1202372 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_2492 possible transporter, RhaT family, DMT superfamily; hypothetical protein complement(1201488..1202372) Rhodobacter sphaeroides ATCC 17029 4895596 YP_001043043.1 CDS Rsph17029_1161 NC_009049.1 1202437 1202850 R PFAM: ferric-uptake regulator; KEGG: rsp:RSP_2494 ferric-uptake regulator; ferric uptake regulator family protein complement(1202437..1202850) Rhodobacter sphaeroides ATCC 17029 4895584 YP_001043044.1 CDS Rsph17029_1162 NC_009049.1 1203431 1207087 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1203431..1207087 Rhodobacter sphaeroides ATCC 17029 4895612 YP_001043045.1 CDS Rsph17029_1163 NC_009049.1 1207467 1208357 R PFAM: Quinolinate phosphoribosyl transferase; KEGG: rsp:RSP_2501 hypothetical protein; quinolinate phosphoribosyl transferase complement(1207467..1208357) Rhodobacter sphaeroides ATCC 17029 4895606 YP_001043046.1 CDS Rsph17029_1164 NC_009049.1 1208666 1210477 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(1208666..1210477) Rhodobacter sphaeroides ATCC 17029 4895603 YP_001043047.1 CDS glmU NC_009049.1 1210477 1211841 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(1210477..1211841) Rhodobacter sphaeroides ATCC 17029 4895600 YP_001043048.1 CDS Rsph17029_1166 NC_009049.1 1211942 1212631 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_2504 phosphoglycolate phosphatase; HAD family hydrolase 1211942..1212631 Rhodobacter sphaeroides ATCC 17029 4895597 YP_001043049.1 CDS Rsph17029_1167 NC_009049.1 1212663 1213115 R PFAM: CreA family protein; KEGG: rsp:RSP_2505 possible CreA protein; CreA family protein complement(1212663..1213115) Rhodobacter sphaeroides ATCC 17029 4895621 YP_001043050.1 CDS Rsph17029_1168 NC_009049.1 1213247 1214404 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_2506 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1213247..1214404 Rhodobacter sphaeroides ATCC 17029 4895617 YP_001043051.1 CDS Rsph17029_1169 NC_009049.1 1214495 1215100 R PFAM: OmpW family protein; KEGG: rsp:RSP_2507 outer membrane protein; OmpW family protein complement(1214495..1215100) Rhodobacter sphaeroides ATCC 17029 4895616 YP_001043052.1 CDS Rsph17029_1170 NC_009049.1 1215172 1216848 D PFAM: carboxyl transferase; KEGG: rsp:RSP_2508 methylcrotonyl-CoA carboxylase beta chain; propionyl-CoA carboxylase 1215172..1216848 Rhodobacter sphaeroides ATCC 17029 4895647 YP_001043053.1 CDS Rsph17029_1171 NC_009049.1 1216944 1218884 D PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rsp:RSP_2509 methylcrotonyl-CoA carboxylase alpha chain; carbamoyl-phosphate synthase subunit L 1216944..1218884 Rhodobacter sphaeroides ATCC 17029 4895652 YP_001043054.1 CDS Rsph17029_1172 NC_009049.1 1218877 1219761 D catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 1218877..1219761 Rhodobacter sphaeroides ATCC 17029 4895680 YP_001043055.1 CDS Rsph17029_1173 NC_009049.1 1219774 1220562 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1219774..1220562 Rhodobacter sphaeroides ATCC 17029 4895671 YP_001043056.1 CDS Rsph17029_1174 NC_009049.1 1220783 1221148 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1220783..1221148 Rhodobacter sphaeroides ATCC 17029 4895684 YP_001043057.1 CDS Rsph17029_1175 NC_009049.1 1221139 1221669 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1221139..1221669 Rhodobacter sphaeroides ATCC 17029 4895709 YP_001043058.1 CDS Rsph17029_1176 NC_009049.1 1221680 1222282 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1221680..1222282 Rhodobacter sphaeroides ATCC 17029 4895712 YP_001043059.1 CDS Rsph17029_1177 NC_009049.1 1222293 1223501 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1222293..1223501 Rhodobacter sphaeroides ATCC 17029 4895708 YP_001043060.1 CDS Rsph17029_1178 NC_009049.1 1223501 1224412 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1223501..1224412 Rhodobacter sphaeroides ATCC 17029 4895692 YP_001043061.1 CDS Rsph17029_1179 NC_009049.1 1224412 1224624 D KEGG: rsp:RSP_2517 hypothetical protein; hypothetical protein 1224412..1224624 Rhodobacter sphaeroides ATCC 17029 4895719 YP_001043062.1 CDS Rsph17029_1180 NC_009049.1 1224635 1225930 D part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 1224635..1225930 Rhodobacter sphaeroides ATCC 17029 4895725 YP_001043063.1 CDS Rsph17029_1181 NC_009049.1 1225935 1226294 D KEGG: rsp:RSP_2519 hypothetical protein; hypothetical protein 1225935..1226294 Rhodobacter sphaeroides ATCC 17029 4895718 YP_001043064.1 CDS Rsph17029_1182 NC_009049.1 1226397 1228418 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1226397..1228418 Rhodobacter sphaeroides ATCC 17029 4895731 YP_001043065.1 CDS Rsph17029_1183 NC_009049.1 1228422 1228832 D KEGG: rsp:RSP_2520 hypothetical protein; hypothetical protein 1228422..1228832 Rhodobacter sphaeroides ATCC 17029 4895771 YP_001043066.1 CDS Rsph17029_1184 NC_009049.1 1228872 1229897 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1228872..1229897 Rhodobacter sphaeroides ATCC 17029 4895770 YP_001043067.1 CDS Rsph17029_1185 NC_009049.1 1229899 1230402 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1229899..1230402 Rhodobacter sphaeroides ATCC 17029 4895769 YP_001043068.1 CDS Rsph17029_1186 NC_009049.1 1230399 1230809 D PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_2524 possible carboxymuconolactone decarboxylase family protein; carboxymuconolactone decarboxylase 1230399..1230809 Rhodobacter sphaeroides ATCC 17029 4895781 YP_001043069.1 CDS Rsph17029_1187 NC_009049.1 1230806 1231420 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1230806..1231420 Rhodobacter sphaeroides ATCC 17029 4895780 YP_001043070.1 CDS Rsph17029_1188 NC_009049.1 1231580 1231885 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1231580..1231885 Rhodobacter sphaeroides ATCC 17029 4895778 YP_001043071.1 CDS Rsph17029_1189 NC_009049.1 1231891 1234053 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1231891..1234053 Rhodobacter sphaeroides ATCC 17029 4895774 YP_001043072.1 CDS Rsph17029_1190 NC_009049.1 1234053 1235594 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1234053..1235594 Rhodobacter sphaeroides ATCC 17029 4895798 YP_001043073.1 CDS Rsph17029_1191 NC_009049.1 1235605 1237041 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1235605..1237041 Rhodobacter sphaeroides ATCC 17029 4895794 YP_001043074.1 CDS Rsph17029_1192 NC_009049.1 1237031 1237786 D KEGG: rsp:RSP_2532 putative biotin protein ligase; TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; biotin--acetyl-CoA-carboxylase ligase 1237031..1237786 Rhodobacter sphaeroides ATCC 17029 4895791 YP_001043075.1 CDS Rsph17029_1193 NC_009049.1 1237797 1238570 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 1237797..1238570 Rhodobacter sphaeroides ATCC 17029 4895790 YP_001043076.1 CDS Rsph17029_1194 NC_009049.1 1238567 1240240 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rsp:RSP_2534 predicted hydrolase of the metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 1238567..1240240 Rhodobacter sphaeroides ATCC 17029 4895807 YP_001043077.1 CDS Rsph17029_1195 NC_009049.1 1241037 1242587 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_2536 ATP-dependent helicase, DEAD-box; DEAD/DEAH box helicase complement(1241037..1242587) Rhodobacter sphaeroides ATCC 17029 4895811 YP_001043078.1 CDS Rsph17029_1196 NC_009049.1 1242819 1244423 R TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rsp:RSP_2537 probable peptide chain release factor RF3; peptide chain release factor 3 complement(1242819..1244423) Rhodobacter sphaeroides ATCC 17029 4895806 YP_001043079.1 CDS Rsph17029_1197 NC_009049.1 1244568 1245362 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2538 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1244568..1245362 Rhodobacter sphaeroides ATCC 17029 4895828 YP_001043080.1 CDS Rsph17029_1198 NC_009049.1 1245399 1246535 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2539 ABC transporter, ATPase subunit; ABC transporter 1245399..1246535 Rhodobacter sphaeroides ATCC 17029 4895825 YP_001043081.1 CDS Rsph17029_1199 NC_009049.1 1246703 1246915 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_2540 twin-arginine translocation system protein, TatA; twin arginine-targeting protein translocase 1246703..1246915 Rhodobacter sphaeroides ATCC 17029 4895842 YP_001043082.1 CDS Rsph17029_1200 NC_009049.1 1246926 1247402 D TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_6059 twin-arginine translocation system protein, TatB; twin-arginine translocation protein subunit TatB 1246926..1247402 Rhodobacter sphaeroides ATCC 17029 4895841 YP_001043083.1 CDS Rsph17029_1201 NC_009049.1 1247399 1248268 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rsp:RSP_2541 twin-arginine translocation system protein, TatC; Sec-independent protein translocase subunit TatC 1247399..1248268 Rhodobacter sphaeroides ATCC 17029 4895835 YP_001043084.1 CDS Rsph17029_1202 NC_009049.1 1248265 1249104 D PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: rsp:RSP_2542 ATPase; hypothetical protein 1248265..1249104 Rhodobacter sphaeroides ATCC 17029 4895829 YP_001043085.1 CDS Rsph17029_1203 NC_009049.1 1249198 1250397 R PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: rsp:RSP_2543 peptidoglycan-binding LysM (possible peptidase); peptidase M23B complement(1249198..1250397) Rhodobacter sphaeroides ATCC 17029 4895884 YP_001043086.1 CDS Rsph17029_1204 NC_009049.1 1250521 1251180 R KEGG: rsp:RSP_2544 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(1250521..1251180) Rhodobacter sphaeroides ATCC 17029 4895851 YP_001043087.1 CDS Rsph17029_1205 NC_009049.1 1251177 1251962 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(1251177..1251962) Rhodobacter sphaeroides ATCC 17029 4895910 YP_001043088.1 CDS Rsph17029_1206 NC_009049.1 1252746 1253459 D PFAM: sugar transferase; KEGG: rsp:RSP_2547 exopolysaccharide production protein ExoY; undecaprenyl-phosphate galactose phosphotransferase 1252746..1253459 Rhodobacter sphaeroides ATCC 17029 4895894 YP_001043089.1 CDS Rsph17029_1207 NC_009049.1 1253531 1254763 D PFAM: polysaccharide export protein; KEGG: rsp:RSP_2548 outer membrane polysaccharide export protein, ExoF; polysaccharide export protein 1253531..1254763 Rhodobacter sphaeroides ATCC 17029 4895886 YP_001043090.1 CDS Rsph17029_1208 NC_009049.1 1254948 1256237 R PFAM: O-antigen polymerase; KEGG: rsp:RSP_2549 putative polysaccharide polymerase; O-antigen polymerase complement(1254948..1256237) Rhodobacter sphaeroides ATCC 17029 4895876 YP_001043091.1 CDS Rsph17029_1209 NC_009049.1 1256254 1257036 R PFAM: glycoside hydrolase, family 16; KEGG: rsp:RSP_2550 endo-beta-1,3-1,4-glycanase protein; licheninase complement(1256254..1257036) Rhodobacter sphaeroides ATCC 17029 4895950 YP_001043092.1 CDS Rsph17029_1210 NC_009049.1 1257242 1258672 D PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2551 glycosyl transferase, family 2; glycosyl transferase family protein 1257242..1258672 Rhodobacter sphaeroides ATCC 17029 4895931 YP_001043093.1 CDS Rsph17029_1211 NC_009049.1 1258688 1259644 R PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2552 glycosyl transferase, family 2; glycosyl transferase family protein complement(1258688..1259644) Rhodobacter sphaeroides ATCC 17029 4895928 YP_001043094.1 CDS Rsph17029_1212 NC_009049.1 1259641 1260819 R KEGG: rsp:RSP_2553 hypothetical protein; hypothetical protein complement(1259641..1260819) Rhodobacter sphaeroides ATCC 17029 4895917 YP_001043095.1 CDS Rsph17029_1213 NC_009049.1 1261123 1261275 D KEGG: rsp:RSP_2554 hypothetical protein; hypothetical protein 1261123..1261275 Rhodobacter sphaeroides ATCC 17029 4896014 YP_001043096.1 CDS Rsph17029_1214 NC_009049.1 1261356 1261622 D KEGG: rsp:RSP_2555 hypothetical protein; hypothetical protein 1261356..1261622 Rhodobacter sphaeroides ATCC 17029 4896000 YP_001043097.1 CDS Rsph17029_1215 NC_009049.1 1261633 1262106 D KEGG: rsp:RSP_2556 hypothetical protein; hypothetical protein 1261633..1262106 Rhodobacter sphaeroides ATCC 17029 4896010 YP_001043098.1 CDS Rsph17029_1216 NC_009049.1 1262103 1263983 D PFAM: asparagine synthase; KEGG: rsp:RSP_2557 putative asparagine synthetase; asparagine synthase 1262103..1263983 Rhodobacter sphaeroides ATCC 17029 4896008 YP_001043099.1 CDS Rsph17029_1217 NC_009049.1 1263980 1264900 D KEGG: rsp:RSP_2558 hypothetical protein; HPr kinase 1263980..1264900 Rhodobacter sphaeroides ATCC 17029 4896011 YP_001043100.1 CDS Rsph17029_1218 NC_009049.1 1264897 1266753 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2559 ABC transporter, fused ATPase and inner membrane subunits; ABC transporter 1264897..1266753 Rhodobacter sphaeroides ATCC 17029 4896006 YP_001043101.1 CDS Rsph17029_1219 NC_009049.1 1266887 1267144 R KEGG: rsp:RSP_6060 hypothetical protein; hypothetical protein complement(1266887..1267144) Rhodobacter sphaeroides ATCC 17029 4896025 YP_001043102.1 CDS Rsph17029_1220 NC_009049.1 1267518 1269887 R PFAM: lipopolysaccharide biosynthesis; KEGG: rsp:RSP_2561 putative succinoglycan biosynthesis transport protein ExoP; lipopolysaccharide biosynthesis protein complement(1267518..1269887) Rhodobacter sphaeroides ATCC 17029 4896021 YP_001043103.1 CDS Rsph17029_1221 NC_009049.1 1269884 1270864 R PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2562 succinoglycan biosynthesis protein ExoM; glycosyl transferase family protein complement(1269884..1270864) Rhodobacter sphaeroides ATCC 17029 4896019 YP_001043104.1 CDS Rsph17029_1222 NC_009049.1 1270861 1271850 R PFAM: glycosyl transferase, family 2; KEGG: rsp:RSP_2563 glycosyl transferase, family 2; glycosyl transferase family protein complement(1270861..1271850) Rhodobacter sphaeroides ATCC 17029 4896023 YP_001043105.1 CDS Rsph17029_1223 NC_009049.1 1271847 1273016 R KEGG: rsp:RSP_2564 glycosyltransferase, succinoglycan biosynthesis protein ExoL; glycosyltransferase, succinoglycan biosynthesis protein ExoL complement(1271847..1273016) Rhodobacter sphaeroides ATCC 17029 4896018 YP_001043106.1 CDS Rsph17029_1224 NC_009049.1 1273038 1274057 R KEGG: rsp:RSP_2565 UDPG-pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase GalU complement(1273038..1274057) Rhodobacter sphaeroides ATCC 17029 4896034 YP_001043107.1 CDS Rsph17029_1225 NC_009049.1 1274332 1275147 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_2567 putative sulfolipid biosynthesis protein; NAD-dependent epimerase/dehydratase complement(1274332..1275147) Rhodobacter sphaeroides ATCC 17029 4896027 YP_001043108.1 CDS Rsph17029_1226 NC_009049.1 1275132 1275968 R PFAM: glycosyl transferase, family 8; KEGG: rsp:RSP_2568 glycosyl transferase (sulfolipid biosynthesis) protein; glycosyl transferase family protein complement(1275132..1275968) Rhodobacter sphaeroides ATCC 17029 4896033 YP_001043109.1 CDS Rsph17029_1227 NC_009049.1 1275969 1277183 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rsp:RSP_2569 sulfolipid (UDP-sulfoquinovose) biosynthesis protein; NAD-dependent epimerase/dehydratase complement(1275969..1277183) Rhodobacter sphaeroides ATCC 17029 4896026 YP_001043110.1 CDS Rsph17029_1228 NC_009049.1 1277330 1277899 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rsp:RSP_2570 protease I; PfpI family intracellular peptidase complement(1277330..1277899) Rhodobacter sphaeroides ATCC 17029 4896071 YP_001043111.1 CDS Rsph17029_1229 NC_009049.1 1278303 1279334 D PFAM: luciferase family protein; KEGG: rsp:RSP_2571 putative oxidoreductase protein; luciferase family protein 1278303..1279334 Rhodobacter sphaeroides ATCC 17029 4896053 YP_001043112.1 CDS Rsph17029_1230 NC_009049.1 1279489 1280280 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_2572 CrpK, Fnr-type transcriptional regulator; CRP/FNR family transcriptional regulator 1279489..1280280 Rhodobacter sphaeroides ATCC 17029 4896051 YP_001043113.1 CDS Rsph17029_1231 NC_009049.1 1280434 1281192 D KEGG: rsp:RSP_2573 hypothetical protein; hypothetical protein 1280434..1281192 Rhodobacter sphaeroides ATCC 17029 4896049 YP_001043114.1 CDS Rsph17029_1232 NC_009049.1 1281306 1281797 R KEGG: rsp:RSP_2574 hypothetical protein; hypothetical protein complement(1281306..1281797) Rhodobacter sphaeroides ATCC 17029 4896076 YP_001043115.1 CDS Rsph17029_1233 NC_009049.1 1282028 1282618 D catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 1282028..1282618 Rhodobacter sphaeroides ATCC 17029 4896075 YP_001043116.1 CDS Rsph17029_1234 NC_009049.1 1282851 1283981 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2576 alcohol dehydrogenase class III; alcohol dehydrogenase 1282851..1283981 Rhodobacter sphaeroides ATCC 17029 4896074 YP_001043117.1 CDS Rsph17029_1235 NC_009049.1 1284111 1284545 D PFAM: cytochrome c, class I; KEGG: rsp:RSP_2577 isocytochrome c2; cytochrome c, class I 1284111..1284545 Rhodobacter sphaeroides ATCC 17029 4896055 YP_001043118.1 CDS Rsph17029_1236 NC_009049.1 1284755 1286557 D PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2578 putative pqq dehydrogenase protein; Pyrrolo-quinoline quinone 1284755..1286557 Rhodobacter sphaeroides ATCC 17029 4896110 YP_001043119.1 CDS Rsph17029_1237 NC_009049.1 1286721 1287251 D KEGG: rsp:RSP_2579 cytochrome c553i; cytochrome c553i 1286721..1287251 Rhodobacter sphaeroides ATCC 17029 4896104 YP_001043120.1 CDS Rsph17029_1238 NC_009049.1 1287239 1288063 D SMART: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_2580 putative methanol oxidation protein; extracellular solute-binding protein 1287239..1288063 Rhodobacter sphaeroides ATCC 17029 4896094 YP_001043121.1 CDS Rsph17029_1239 NC_009049.1 1288060 1288587 D KEGG: rsp:RSP_2581 rhodanese; rhodanese 1288060..1288587 Rhodobacter sphaeroides ATCC 17029 4896091 YP_001043122.1 CDS Rsph17029_1240 NC_009049.1 1288621 1289805 D KEGG: rsp:RSP_2582 hypothetical protein; hypothetical protein 1288621..1289805 Rhodobacter sphaeroides ATCC 17029 4896127 YP_001043123.1 CDS Rsph17029_1241 NC_009049.1 1289826 1290788 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: rsp:RSP_2583 hypothetical protein; hypothetical protein 1289826..1290788 Rhodobacter sphaeroides ATCC 17029 4896123 YP_001043124.1 CDS Rsph17029_1242 NC_009049.1 1290815 1291258 D KEGG: rsp:RSP_2584 hypothetical protein; hypothetical protein 1290815..1291258 Rhodobacter sphaeroides ATCC 17029 4896121 YP_001043125.1 CDS Rsph17029_1243 NC_009049.1 1291274 1291522 D KEGG: rsp:RSP_2585 hypothetical protein; hypothetical protein 1291274..1291522 Rhodobacter sphaeroides ATCC 17029 4896107 YP_001043126.1 CDS Rsph17029_1244 NC_009049.1 1291519 1292247 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2586 ABC multidrug efflux transporter, ATPase subunit; ABC transporter 1291519..1292247 Rhodobacter sphaeroides ATCC 17029 4896137 YP_001043127.1 CDS Rsph17029_1245 NC_009049.1 1292244 1293122 D PFAM: ABC-2 type transporter; KEGG: rsp:RSP_2587 ABC multidrug efflux transporter, inner membrane subunit; ABC transporter 1292244..1293122 Rhodobacter sphaeroides ATCC 17029 4896133 YP_001043128.1 CDS Rsph17029_1246 NC_009049.1 1293132 1293725 D KEGG: rsp:RSP_2588 hypothetical protein; hypothetical protein 1293132..1293725 Rhodobacter sphaeroides ATCC 17029 4896132 YP_001043129.1 CDS Rsph17029_1247 NC_009049.1 1293870 1294964 R PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_2589 hypothetical protein; beta-lactamase domain-containing protein complement(1293870..1294964) Rhodobacter sphaeroides ATCC 17029 4896163 YP_001043130.1 CDS Rsph17029_1248 NC_009049.1 1295019 1295825 D KEGG: rsp:RSP_2590 hypothetical protein; hypothetical protein 1295019..1295825 Rhodobacter sphaeroides ATCC 17029 4896165 YP_001043131.1 CDS Rsph17029_1249 NC_009049.1 1295992 1296699 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_2591 two component transcriptional regulator, LuxR family family; two component LuxR family transcriptional regulator 1295992..1296699 Rhodobacter sphaeroides ATCC 17029 4896186 YP_001043132.1 CDS Rsph17029_1250 NC_009049.1 1296710 1297870 D PFAM: domain of unknown function DUF1745; KEGG: rsp:RSP_2592 hypothetical protein; hypothetical protein 1296710..1297870 Rhodobacter sphaeroides ATCC 17029 4896180 YP_001043133.1 CDS Rsph17029_1251 NC_009049.1 1297860 1299293 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_2593 hybrid histidine kinase; histidine kinase 1297860..1299293 Rhodobacter sphaeroides ATCC 17029 4896176 YP_001043134.1 CDS Rsph17029_1252 NC_009049.1 1299304 1299912 D KEGG: rsp:RSP_2594 hypothetical protein; hypothetical protein 1299304..1299912 Rhodobacter sphaeroides ATCC 17029 4896174 YP_001043135.1 CDS Rsph17029_1253 NC_009049.1 1299909 1300400 D KEGG: rsp:RSP_2595 hypothetical protein; hypothetical protein 1299909..1300400 Rhodobacter sphaeroides ATCC 17029 4896190 YP_001043136.1 CDS Rsph17029_1254 NC_009049.1 1300498 1301280 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2596 ABC transporter, ATPase subunit; ABC transporter complement(1300498..1301280) Rhodobacter sphaeroides ATCC 17029 4896199 YP_001043137.1 CDS Rsph17029_1255 NC_009049.1 1301277 1302257 R KEGG: rsp:RSP_2597 ABC transporter, periplasmic substrate-binding protein; ABC transporter substrate-binding protein complement(1301277..1302257) Rhodobacter sphaeroides ATCC 17029 4896197 YP_001043138.1 CDS Rsph17029_1256 NC_009049.1 1302277 1303077 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2598 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1302277..1303077) Rhodobacter sphaeroides ATCC 17029 4896201 YP_001043139.1 CDS Rsph17029_1257 NC_009049.1 1303191 1303883 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2599 phosphate regulon transcriptional regulator, PhoR; two component transcriptional regulator complement(1303191..1303883) Rhodobacter sphaeroides ATCC 17029 4896192 YP_001043140.1 CDS Rsph17029_1258 NC_009049.1 1303883 1304608 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rsp:RSP_2600 phosphate transport system regulatory protein; phosphate uptake regulator PhoU complement(1303883..1304608) Rhodobacter sphaeroides ATCC 17029 4896187 YP_001043141.1 CDS Rsph17029_1259 NC_009049.1 1304619 1305416 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(1304619..1305416) Rhodobacter sphaeroides ATCC 17029 4896214 YP_001043142.1 CDS Rsph17029_1260 NC_009049.1 1305427 1306776 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2602 ABC phosphate transporter, inner membrane subunit PstA; phosphate ABC transporter permease complement(1305427..1306776) Rhodobacter sphaeroides ATCC 17029 4896209 YP_001043143.1 CDS Rsph17029_1261 NC_009049.1 1306773 1308218 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2603 ABC phosphate transporter, inner membrane subunit PstC; phosphate ABC transporter permease complement(1306773..1308218) Rhodobacter sphaeroides ATCC 17029 4896204 YP_001043144.1 CDS Rsph17029_1262 NC_009049.1 1308277 1309320 R KEGG: rsp:RSP_2604 ABC phosphate transporter, periplasmic phosphate-binding protein; phosphate ABC transporter, periplasmic phosphate-binding protein complement(1308277..1309320) Rhodobacter sphaeroides ATCC 17029 4896236 YP_001043145.1 CDS Rsph17029_1263 NC_009049.1 1309667 1310356 R PFAM: protein of unknown function DUF159; KEGG: rsp:RSP_2605 hypothetical protein; hypothetical protein complement(1309667..1310356) Rhodobacter sphaeroides ATCC 17029 4896226 YP_001043146.1 CDS Rsph17029_1264 NC_009049.1 1310367 1310720 R PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_2606 ArsR family arsenical resistance operon repressor; regulatory protein ArsR complement(1310367..1310720) Rhodobacter sphaeroides ATCC 17029 4896229 YP_001043147.1 CDS Rsph17029_1265 NC_009049.1 1310787 1311287 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_2607 nitrilotriacetate monooxygenase component B; flavin reductase domain-containing protein complement(1310787..1311287) Rhodobacter sphaeroides ATCC 17029 4896227 YP_001043148.1 CDS Rsph17029_1266 NC_009049.1 1311524 1312519 D PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rsp:RSP_2608 magnesium/cobalt transport protein, MIT family; Fis family transcriptional regulator 1311524..1312519 Rhodobacter sphaeroides ATCC 17029 4896232 YP_001043149.1 CDS Rsph17029_1267 NC_009049.1 1312664 1313740 R Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase complement(1312664..1313740) Rhodobacter sphaeroides ATCC 17029 4896218 YP_001043150.1 CDS Rsph17029_1268 NC_009049.1 1313964 1314782 R PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2610 trancriptional regulator, MerR family; MerR family transcriptional regulator complement(1313964..1314782) Rhodobacter sphaeroides ATCC 17029 4897065 YP_001043151.1 CDS ihfA NC_009049.1 1314789 1315091 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(1314789..1315091) Rhodobacter sphaeroides ATCC 17029 4896254 YP_001043152.1 CDS Rsph17029_1270 NC_009049.1 1315182 1316153 R KEGG: rsp:RSP_2612 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(1315182..1316153) Rhodobacter sphaeroides ATCC 17029 4896248 YP_001043153.1 CDS Rsph17029_1271 NC_009049.1 1316160 1317272 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(1316160..1317272) Rhodobacter sphaeroides ATCC 17029 4896246 YP_001043154.1 CDS rpmF NC_009049.1 1317299 1317505 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(1317299..1317505) Rhodobacter sphaeroides ATCC 17029 4896243 YP_001043155.1 CDS Rsph17029_1273 NC_009049.1 1317683 1318276 R KEGG: rsp:RSP_2615 hypothetical protein; hypothetical protein complement(1317683..1318276) Rhodobacter sphaeroides ATCC 17029 4896297 YP_001043156.1 CDS Rsph17029_1274 NC_009049.1 1318498 1318995 D PFAM: SmpA/OmlA domain protein; KEGG: rsp:RSP_2616 hypothetical protein; SmpA/OmlA domain-containing protein 1318498..1318995 Rhodobacter sphaeroides ATCC 17029 4896278 YP_001043157.1 CDS Rsph17029_1275 NC_009049.1 1319086 1319490 R KEGG: rsp:RSP_2617 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(1319086..1319490) Rhodobacter sphaeroides ATCC 17029 4896270 YP_001043158.1 CDS Rsph17029_1276 NC_009049.1 1319597 1320349 D KEGG: rsp:RSP_2618 putative hemolysin; putative hemolysin 1319597..1320349 Rhodobacter sphaeroides ATCC 17029 4896257 YP_001043159.1 CDS mnmA NC_009049.1 1320356 1321495 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1320356..1321495) Rhodobacter sphaeroides ATCC 17029 4896313 YP_001043160.1 CDS Rsph17029_1278 NC_009049.1 1321619 1321897 D PFAM: protein of unknown function DUF1153; KEGG: rsp:RSP_2620 hypothetical protein; hypothetical protein 1321619..1321897 Rhodobacter sphaeroides ATCC 17029 4896306 YP_001043161.1 CDS Rsph17029_1279 NC_009049.1 1321994 1322707 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_2621 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1321994..1322707 Rhodobacter sphaeroides ATCC 17029 4896299 YP_001043162.1 CDS Rsph17029_1280 NC_009049.1 1322803 1324917 D KEGG: rsp:RSP_2622 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; NAD-dependent DNA ligase 1322803..1324917 Rhodobacter sphaeroides ATCC 17029 4896320 YP_001043163.1 CDS Rsph17029_1281 NC_009049.1 1324914 1327001 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1324914..1327001 Rhodobacter sphaeroides ATCC 17029 4896329 YP_001043164.1 CDS Rsph17029_1282 NC_009049.1 1327253 1327375 D KEGG: rsp:RSP_2624 hypothetical protein; hypothetical protein 1327253..1327375 Rhodobacter sphaeroides ATCC 17029 4896327 YP_001043165.1 CDS Rsph17029_1283 NC_009049.1 1327526 1327966 R KEGG: rsp:RSP_2625 NifU-related protein involved in Fe-S cluster formation; NifU-related protein involved in Fe-S cluster formation complement(1327526..1327966) Rhodobacter sphaeroides ATCC 17029 4896330 YP_001043166.1 CDS Rsph17029_1284 NC_009049.1 1328032 1328391 D PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: rsp:RSP_2627 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1328032..1328391 Rhodobacter sphaeroides ATCC 17029 4896322 YP_001043167.1 CDS Rsph17029_1285 NC_009049.1 1328584 1329417 R PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: rsp:RSP_2628 glutamyl-/glutaminyl-tRNA synthetase; glutamyl-tRNA synthetase complement(1328584..1329417) Rhodobacter sphaeroides ATCC 17029 4896314 YP_001043168.1 CDS Rsph17029_1286 NC_009049.1 1329402 1330736 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(1329402..1330736) Rhodobacter sphaeroides ATCC 17029 4896336 YP_001043169.1 CDS Rsph17029_1287 NC_009049.1 1330740 1333463 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A complement(1330740..1333463) Rhodobacter sphaeroides ATCC 17029 4896335 YP_001043170.1 CDS Rsph17029_1288 NC_009049.1 1333706 1333969 D PFAM: Usg family protein; KEGG: rsp:RSP_2631 USG protein; Usg family protein 1333706..1333969 Rhodobacter sphaeroides ATCC 17029 4896331 YP_001043171.1 CDS Rsph17029_1289 NC_009049.1 1334101 1335027 R TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rsp:RSP_2632 arginase; arginase complement(1334101..1335027) Rhodobacter sphaeroides ATCC 17029 4896351 YP_001043172.1 CDS Rsph17029_1290 NC_009049.1 1335515 1337485 D TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rsp:RSP_2633 cytochrome c maturation protein, CcmF; cytochrome c-type biogenesis protein CcmF 1335515..1337485 Rhodobacter sphaeroides ATCC 17029 4896340 YP_001043173.1 CDS Rsph17029_1291 NC_009049.1 1337482 1337937 D PFAM: cytochrome C biogenesis protein; KEGG: rsp:RSP_2634 cytochrome c maturation protein, CcmH; cytochrome C biogenesis protein 1337482..1337937 Rhodobacter sphaeroides ATCC 17029 4896338 YP_001043174.1 CDS Rsph17029_1292 NC_009049.1 1337999 1338775 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: jan:Jann_2154 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1337999..1338775 Rhodobacter sphaeroides ATCC 17029 4896363 YP_001043175.1 CDS ilvH NC_009049.1 1338827 1339387 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(1338827..1339387) Rhodobacter sphaeroides ATCC 17029 4896359 YP_001043176.1 CDS Rsph17029_1294 NC_009049.1 1339470 1341236 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_2637 acetolactate synthase III large subunit; acetolactate synthase 3 catalytic subunit complement(1339470..1341236) Rhodobacter sphaeroides ATCC 17029 4896357 YP_001043177.1 CDS Rsph17029_1295 NC_009049.1 1341531 1342448 R TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rsp:RSP_2638 putative sodium/calcium exchanger; CaCA family Na(+)/Ca(+) antiporter complement(1341531..1342448) Rhodobacter sphaeroides ATCC 17029 4896347 YP_001043178.1 CDS Rsph17029_1296 NC_009049.1 1342939 1343781 R Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase complement(1342939..1343781) Rhodobacter sphaeroides ATCC 17029 4896387 YP_001043179.1 CDS Rsph17029_1297 NC_009049.1 1343888 1344340 R PFAM: RDD domain containing protein; KEGG: rsp:RSP_2640 hypothetical protein; RDD domain-containing protein complement(1343888..1344340) Rhodobacter sphaeroides ATCC 17029 4896386 YP_001043180.1 CDS Rsph17029_1298 NC_009049.1 1344777 1345187 R KEGG: rsp:RSP_2641 hypothetical protein; hypothetical protein complement(1344777..1345187) Rhodobacter sphaeroides ATCC 17029 4896383 YP_001043181.1 CDS Rsph17029_1299 NC_009049.1 1345628 1346098 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rsp:RSP_2642 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(1345628..1346098) Rhodobacter sphaeroides ATCC 17029 4896401 YP_001043182.1 CDS Rsph17029_1300 NC_009049.1 1346276 1349089 D PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: rsp:RSP_2643 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 1346276..1349089 Rhodobacter sphaeroides ATCC 17029 4896391 YP_001043183.1 CDS Rsph17029_1301 NC_009049.1 1349076 1349345 D KEGG: rsp:RSP_2644 hypothetical protein; hypothetical protein 1349076..1349345 Rhodobacter sphaeroides ATCC 17029 4896390 YP_001043184.1 CDS Rsph17029_1302 NC_009049.1 1349543 1350181 R KEGG: rsp:RSP_2645 KDPG/KHG bifunctional aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(1349543..1350181) Rhodobacter sphaeroides ATCC 17029 4896389 YP_001043185.1 CDS Rsph17029_1303 NC_009049.1 1350442 1352247 R catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase complement(1350442..1352247) Rhodobacter sphaeroides ATCC 17029 4896435 YP_001043186.1 CDS Rsph17029_1304 NC_009049.1 1352891 1354081 D KEGG: rsp:RSP_2647 predicted SAM-dependent methyltransferase; SAM-dependent methyltransferase 1352891..1354081 Rhodobacter sphaeroides ATCC 17029 4896416 YP_001043187.1 CDS Rsph17029_1305 NC_009049.1 1354078 1354620 D KEGG: rsp:RSP_2648 hypothetical protein; hypothetical protein 1354078..1354620 Rhodobacter sphaeroides ATCC 17029 4896413 YP_001043188.1 CDS Rsph17029_1306 NC_009049.1 1354671 1355357 R PFAM: peptidase M48, Ste24p; KEGG: rsp:RSP_2649 putative Zn-dependent protease; peptidase M48, Ste24p complement(1354671..1355357) Rhodobacter sphaeroides ATCC 17029 4896417 YP_001043189.1 CDS Rsph17029_1307 NC_009049.1 1355420 1356604 R KEGG: rsp:RSP_2650 hypothetical protein; hypothetical protein complement(1355420..1356604) Rhodobacter sphaeroides ATCC 17029 4896452 YP_001043190.1 CDS Rsph17029_1308 NC_009049.1 1356627 1356791 R hypothetical protein complement(1356627..1356791) Rhodobacter sphaeroides ATCC 17029 4896474 YP_001043191.1 CDS Rsph17029_1309 NC_009049.1 1356788 1358188 R KEGG: rsp:RSP_2651 hypothetical protein; hypothetical protein complement(1356788..1358188) Rhodobacter sphaeroides ATCC 17029 4896504 YP_001043192.1 CDS Rsph17029_1310 NC_009049.1 1358188 1358640 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2652 putative acetyltransferase; N-acetyltransferase GCN5 complement(1358188..1358640) Rhodobacter sphaeroides ATCC 17029 4896510 YP_001043193.1 CDS Rsph17029_1311 NC_009049.1 1358679 1359518 R PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2653 ATPase, AAA family; ATPase complement(1358679..1359518) Rhodobacter sphaeroides ATCC 17029 4896515 YP_001043194.1 CDS Rsph17029_1312 NC_009049.1 1359651 1360127 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: rsp:RSP_2654 DnaK suppressor protein, DksA family; TraR/DksA family transcriptional regulator 1359651..1360127 Rhodobacter sphaeroides ATCC 17029 4896608 YP_001043195.1 CDS Rsph17029_1313 NC_009049.1 1360223 1361398 D PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rsp:RSP_2656 putative salicylate hydroxylase (salicylate 1-monooxygenase); FAD-binding monooxygenase 1360223..1361398 Rhodobacter sphaeroides ATCC 17029 4896648 YP_001043196.1 CDS Rsph17029_1314 NC_009049.1 1361395 1361856 R TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_2655 hypothetical protein; hypothetical protein complement(1361395..1361856) Rhodobacter sphaeroides ATCC 17029 4896632 YP_001043197.1 CDS Rsph17029_1315 NC_009049.1 1361936 1362715 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_2657 exodeoxyribonuclease III; exodeoxyribonuclease III complement(1361936..1362715) Rhodobacter sphaeroides ATCC 17029 4896631 YP_001043198.1 CDS Rsph17029_1316 NC_009049.1 1362792 1363118 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_2658 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly accessory protein complement(1362792..1363118) Rhodobacter sphaeroides ATCC 17029 4896654 YP_001043199.1 CDS Rsph17029_1317 NC_009049.1 1363193 1364329 D KEGG: rsp:RSP_2659 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; putative deoxyguanosinetriphosphate triphosphohydrolase 1363193..1364329 Rhodobacter sphaeroides ATCC 17029 4896652 YP_001043200.1 CDS Rsph17029_1318 NC_009049.1 1364499 1365473 D TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rsp:RSP_2660 ribonuclease BN family protein; putative ribonuclease BN 1364499..1365473 Rhodobacter sphaeroides ATCC 17029 4896651 YP_001043201.1 CDS Rsph17029_1319 NC_009049.1 1365479 1366621 R PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_2661 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1365479..1366621) Rhodobacter sphaeroides ATCC 17029 4896684 YP_001043202.1 CDS Rsph17029_1320 NC_009049.1 1366618 1368099 R TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_2662 glycerol kinase; glycerol kinase complement(1366618..1368099) Rhodobacter sphaeroides ATCC 17029 4896677 YP_001043203.1 CDS Rsph17029_1321 NC_009049.1 1368489 1370213 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2663 ABC sugar (glycerol) transporter, periplasmic binding protein; extracellular solute-binding protein complement(1368489..1370213) Rhodobacter sphaeroides ATCC 17029 4896664 YP_001043204.1 CDS Rsph17029_1322 NC_009049.1 1370275 1370547 R KEGG: rsp:RSP_2664 hypothetical protein; hypothetical protein complement(1370275..1370547) Rhodobacter sphaeroides ATCC 17029 4896663 YP_001043205.1 CDS Rsph17029_1323 NC_009049.1 1370549 1371352 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2665 ABC sugar (glycerol) transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1370549..1371352) Rhodobacter sphaeroides ATCC 17029 4896661 YP_001043206.1 CDS Rsph17029_1324 NC_009049.1 1371390 1372262 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2666 ABC sugar (glycerol) transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1371390..1372262) Rhodobacter sphaeroides ATCC 17029 4896697 YP_001043207.1 CDS Rsph17029_1325 NC_009049.1 1372262 1373347 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2667 ABC sugar (glycerol) transporter, ATPase subunit; ABC transporter complement(1372262..1373347) Rhodobacter sphaeroides ATCC 17029 4896692 YP_001043208.1 CDS Rsph17029_1326 NC_009049.1 1373358 1374446 R PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: rsp:RSP_2669 ABC sugar (glycerol) transporter, ATPase subunit; ABC transporter complement(1373358..1374446) Rhodobacter sphaeroides ATCC 17029 4896689 YP_001043209.1 CDS glpD NC_009049.1 1374576 1376195 R in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase complement(1374576..1376195) Rhodobacter sphaeroides ATCC 17029 4896695 YP_001043210.1 CDS Rsph17029_1328 NC_009049.1 1376656 1376931 R KEGG: rsp:RSP_2671 hypothetical protein; hypothetical protein complement(1376656..1376931) Rhodobacter sphaeroides ATCC 17029 4896685 YP_001043211.1 CDS Rsph17029_1329 NC_009049.1 1377098 1377457 D KEGG: rsp:RSP_2672 hypothetical protein; hypothetical protein 1377098..1377457 Rhodobacter sphaeroides ATCC 17029 4896715 YP_001043212.1 CDS Rsph17029_1330 NC_009049.1 1377552 1379897 R PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2673 glucose dehydrogenase; quinoprotein glucose dehydrogenase complement(1377552..1379897) Rhodobacter sphaeroides ATCC 17029 4896704 YP_001043213.1 CDS Rsph17029_1331 NC_009049.1 1380100 1380669 R PFAM: PRC-barrel domain protein; KEGG: rsp:RSP_2674 hypothetical protein; PRC-barrel domain-containing protein complement(1380100..1380669) Rhodobacter sphaeroides ATCC 17029 4896703 YP_001043214.1 CDS Rsph17029_1332 NC_009049.1 1381084 1381878 R KEGG: rsp:RSP_2675 hypothetical protein; hypothetical protein complement(1381084..1381878) Rhodobacter sphaeroides ATCC 17029 4896702 YP_001043215.1 CDS Rsph17029_1333 NC_009049.1 1382002 1382913 R PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: rsp:RSP_2676 hypothetical protein; transport-associated complement(1382002..1382913) Rhodobacter sphaeroides ATCC 17029 4896720 YP_001043216.1 CDS Rsph17029_1334 NC_009049.1 1383919 1384299 R PFAM: response regulator receiver; KEGG: rsp:RSP_6064 response regulator receiver domain protein; response regulator receiver protein complement(1383919..1384299) Rhodobacter sphaeroides ATCC 17029 4896719 YP_001043217.1 CDS Rsph17029_1335 NC_009049.1 1384612 1385364 D PFAM: MgtC/SapB transporter; KEGG: rsp:RSP_2677 putative Mg++ transport associated protein, MgtC; MgtC/SapB transporter 1384612..1385364 Rhodobacter sphaeroides ATCC 17029 4896717 YP_001043218.1 CDS Rsph17029_1336 NC_009049.1 1385552 1385806 R KEGG: rsp:RSP_2678 hypothetical protein; hypothetical protein complement(1385552..1385806) Rhodobacter sphaeroides ATCC 17029 4896729 YP_001043219.1 CDS Rsph17029_1337 NC_009049.1 1385803 1388409 R PFAM: DNA primase, small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: rsp:RSP_2679 ATP-dependent DNA ligase; ATP dependent DNA ligase complement(1385803..1388409) Rhodobacter sphaeroides ATCC 17029 4896726 YP_001043220.1 CDS Rsph17029_1338 NC_009049.1 1389180 1389395 R KEGG: rsp:RSP_6225 hypothetical protein; hypothetical protein complement(1389180..1389395) Rhodobacter sphaeroides ATCC 17029 4896745 YP_001043221.1 CDS Rsph17029_1339 NC_009049.1 1389523 1390029 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_2681 sigma factor, RpoE; ECF subfamily RNA polymerase sigma-24 factor 1389523..1390029 Rhodobacter sphaeroides ATCC 17029 4896743 YP_001043222.1 CDS Rsph17029_1340 NC_009049.1 1390259 1391191 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: rsp:RSP_2682 acyl-carrier-protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 1390259..1391191 Rhodobacter sphaeroides ATCC 17029 4896748 YP_001043223.1 CDS Rsph17029_1341 NC_009049.1 1391422 1391652 R PFAM: protein of unknown function DUF1289; KEGG: rsp:RSP_2683 hypothetical protein; hypothetical protein complement(1391422..1391652) Rhodobacter sphaeroides ATCC 17029 4896759 YP_001043224.1 CDS Rsph17029_1342 NC_009049.1 1391649 1392131 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1391649..1392131) Rhodobacter sphaeroides ATCC 17029 4896758 YP_001043225.1 CDS Rsph17029_1343 NC_009049.1 1392128 1393375 R KEGG: rsp:RSP_2685 putative cytochrome c-type biogenesis protein, CycH; cytochrome C biogenesis protein complement(1392128..1393375) Rhodobacter sphaeroides ATCC 17029 4896755 YP_001043226.1 CDS Rsph17029_1344 NC_009049.1 1393578 1394825 D TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2686 putative sarcosine oxidase beta subunit; sarcosine oxidase subunit beta 1393578..1394825 Rhodobacter sphaeroides ATCC 17029 4896771 YP_001043227.1 CDS Rsph17029_1345 NC_009049.1 1394905 1395279 D KEGG: rsp:RSP_2687 cytochrome b-c1 subunit IV; cytochrome b-c1 subunit IV 1394905..1395279 Rhodobacter sphaeroides ATCC 17029 4896770 YP_001043228.1 CDS Rsph17029_1346 NC_009049.1 1395319 1395642 D PFAM: Sarcosine oxidase, delta subunit, heterotetrameric; KEGG: rsp:RSP_2688 putative sarcosine oxidase delta subunit protein; sarcosine oxidase, delta subunit, heterotetrameric 1395319..1395642 Rhodobacter sphaeroides ATCC 17029 4896772 YP_001043229.1 CDS Rsph17029_1347 NC_009049.1 1395639 1398620 D TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_2689 putative sarcosine oxidase, alpha subunit; sarcosine oxidase subunit alpha 1395639..1398620 Rhodobacter sphaeroides ATCC 17029 4896761 YP_001043230.1 CDS Rsph17029_1348 NC_009049.1 1398613 1399170 D PFAM: Sarcosine oxidase, gamma subunit; KEGG: rsp:RSP_2690 putative sarcosine oxidase gamma subunit; sarcosine oxidase, gamma subunit 1398613..1399170 Rhodobacter sphaeroides ATCC 17029 4896781 YP_001043231.1 CDS Rsph17029_1349 NC_009049.1 1399237 1401126 R PFAM: acyltransferase 3; KEGG: rsp:RSP_2692 acyltransferase domain (LPS); acyltransferase 3 complement(1399237..1401126) Rhodobacter sphaeroides ATCC 17029 4896777 YP_001043232.1 CDS Rsph17029_1350 NC_009049.1 1401382 1401981 D PFAM: manganese and iron superoxide dismutase; KEGG: rsp:RSP_2693 superoxide dismutase, Fe-Mn family; superoxide dismutase 1401382..1401981 Rhodobacter sphaeroides ATCC 17029 4896773 YP_001043233.1 CDS Rsph17029_1351 NC_009049.1 1402135 1402689 R PFAM: conserved hypothetical protein 730; KEGG: rsp:RSP_2694 hypothetical protein; hypothetical protein complement(1402135..1402689) Rhodobacter sphaeroides ATCC 17029 4896800 YP_001043234.1 CDS Rsph17029_1352 NC_009049.1 1402790 1404112 D PFAM: Peptidoglycan-binding LysM; KEGG: rsp:RSP_2695 possible peptidoglycan binding protein; peptidoglycan-binding LysM 1402790..1404112 Rhodobacter sphaeroides ATCC 17029 4896799 YP_001043235.1 CDS Rsph17029_1353 NC_009049.1 1404198 1406036 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2696 ABC transporter, fused ATPase and inner membrane subunits; ABC transporter 1404198..1406036 Rhodobacter sphaeroides ATCC 17029 4896825 YP_001043236.1 CDS Rsph17029_1354 NC_009049.1 1406136 1406783 D KEGG: rsp:RSP_2697 hypothetical protein; hypothetical protein 1406136..1406783 Rhodobacter sphaeroides ATCC 17029 4896824 YP_001043237.1 CDS Rsph17029_1355 NC_009049.1 1406811 1408175 D PFAM: Pyrrolo-quinoline quinone; KEGG: rsp:RSP_2698 putative quinoprotein; Pyrrolo-quinoline quinone 1406811..1408175 Rhodobacter sphaeroides ATCC 17029 4896819 YP_001043238.1 CDS engA NC_009049.1 1408234 1409697 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1408234..1409697 Rhodobacter sphaeroides ATCC 17029 4896835 YP_001043239.1 CDS Rsph17029_1357 NC_009049.1 1409940 1411919 R KEGG: rsp:RSP_2700 ABC oligo/dipeptide transporter, fused ATPase subunits; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1409940..1411919) Rhodobacter sphaeroides ATCC 17029 4896843 YP_001043240.1 CDS Rsph17029_1358 NC_009049.1 1411912 1413066 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2701 ABC oligo/dipeptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1411912..1413066) Rhodobacter sphaeroides ATCC 17029 4896842 YP_001043241.1 CDS Rsph17029_1359 NC_009049.1 1413066 1414091 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2702 ABC oligo/dipeptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1413066..1414091) Rhodobacter sphaeroides ATCC 17029 4896844 YP_001043242.1 CDS Rsph17029_1360 NC_009049.1 1414095 1415726 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_2703 ABC dipeptide transporter, periplasmic binding protein; extracellular solute-binding protein complement(1414095..1415726) Rhodobacter sphaeroides ATCC 17029 4896840 YP_001043243.1 CDS miaA NC_009049.1 1415928 1416872 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1415928..1416872) Rhodobacter sphaeroides ATCC 17029 4896834 YP_001043244.1 CDS pyrH NC_009049.1 1416962 1417702 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1416962..1417702 Rhodobacter sphaeroides ATCC 17029 4896859 YP_001043245.1 CDS frr NC_009049.1 1417788 1418354 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1417788..1418354 Rhodobacter sphaeroides ATCC 17029 4896853 YP_001043246.1 CDS Rsph17029_1364 NC_009049.1 1418424 1419167 D KEGG: rsp:RSP_2707 undecaprenyl pyrophosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1418424..1419167 Rhodobacter sphaeroides ATCC 17029 4896847 YP_001043247.1 CDS Rsph17029_1365 NC_009049.1 1419164 1419985 D PFAM: phosphatidate cytidylyltransferase; KEGG: rsp:RSP_2708 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1419164..1419985 Rhodobacter sphaeroides ATCC 17029 4896947 YP_001043248.1 CDS Rsph17029_1366 NC_009049.1 1419994 1421178 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1419994..1421178 Rhodobacter sphaeroides ATCC 17029 4896945 YP_001043249.1 CDS Rsph17029_1367 NC_009049.1 1421185 1422519 D KEGG: rsp:RSP_2710 putative membrane-associated zinc metalloprotease; TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; putative membrane-associated zinc metalloprotease 1421185..1422519 Rhodobacter sphaeroides ATCC 17029 4896971 YP_001043250.1 CDS Rsph17029_1368 NC_009049.1 1422682 1422819 D hypothetical protein 1422682..1422819 Rhodobacter sphaeroides ATCC 17029 4896991 YP_001043251.1 CDS Rsph17029_1369 NC_009049.1 1422913 1425312 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rsp:RSP_2711 putative outer membrane protein; surface antigen (D15) 1422913..1425312 Rhodobacter sphaeroides ATCC 17029 4897003 YP_001043252.1 CDS Rsph17029_1370 NC_009049.1 1425312 1426004 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: rsp:RSP_6204 hypothetical protein; outer membrane chaperone Skp 1425312..1426004 Rhodobacter sphaeroides ATCC 17029 4897005 YP_001043253.1 CDS fabZ NC_009049.1 1426090 1426557 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1426090..1426557 Rhodobacter sphaeroides ATCC 17029 4896972 YP_001043254.1 CDS Rsph17029_1372 NC_009049.1 1426561 1427343 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1426561..1427343 Rhodobacter sphaeroides ATCC 17029 4897009 YP_001043255.1 CDS Rsph17029_1373 NC_009049.1 1427340 1428161 D PFAM: protein of unknown function DUF1009; KEGG: rsp:RSP_2715 hypothetical protein; hypothetical protein 1427340..1428161 Rhodobacter sphaeroides ATCC 17029 4897159 YP_001043256.1 CDS Rsph17029_1374 NC_009049.1 1428158 1429297 D KEGG: rsp:RSP_2716 putative lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase, family 19; lipid-A-disaccharide synthase 1428158..1429297 Rhodobacter sphaeroides ATCC 17029 4897142 YP_001043257.1 CDS Rsph17029_1375 NC_009049.1 1429420 1431243 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2717 putative UUP ATPase; ABC transporter 1429420..1431243 Rhodobacter sphaeroides ATCC 17029 4897153 YP_001043258.1 CDS Rsph17029_1376 NC_009049.1 1431456 1432058 D KEGG: rsp:RSP_2718 possible outer membrane protein; putative outer membrane protein 1431456..1432058 Rhodobacter sphaeroides ATCC 17029 4897076 YP_001043259.1 CDS Rsph17029_1377 NC_009049.1 1432292 1432741 D PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_2719 transcriptional regulator, AsnC/Lrp family; AsnC family transcriptional regulator 1432292..1432741 Rhodobacter sphaeroides ATCC 17029 4897160 YP_001043260.1 CDS Rsph17029_1378 NC_009049.1 1433115 1433723 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rsp:RSP_2720 putative LysE/RhtB family amino acid efflux pump; lysine exporter protein LysE/YggA 1433115..1433723 Rhodobacter sphaeroides ATCC 17029 4897312 YP_001043261.1 CDS Rsph17029_1379 NC_009049.1 1433720 1434058 R PFAM: protein of unknown function DUF419; KEGG: rsp:RSP_2721 hypothetical protein; hypothetical protein complement(1433720..1434058) Rhodobacter sphaeroides ATCC 17029 4897301 YP_001043262.1 CDS cysS NC_009049.1 1434275 1435735 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1434275..1435735 Rhodobacter sphaeroides ATCC 17029 4897214 YP_001043263.1 CDS Rsph17029_1381 NC_009049.1 1435837 1437489 D TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rsp:RSP_2723 2-isopropylmalate synthase; putative alpha-isopropylmalate/homocitrate synthase family transferase 1435837..1437489 Rhodobacter sphaeroides ATCC 17029 4897427 YP_001043264.1 CDS Rsph17029_1382 NC_009049.1 1437486 1438205 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_2724 probable methylase involved in ubiquinone/menaquinone biosynthesis; type 12 methyltransferase 1437486..1438205 Rhodobacter sphaeroides ATCC 17029 4897425 YP_001043265.1 CDS Rsph17029_1383 NC_009049.1 1438202 1438969 D KEGG: rsp:RSP_2725 probable phytoene/squalene synthetase; putative phytoene/squalene synthetase 1438202..1438969 Rhodobacter sphaeroides ATCC 17029 4897403 YP_001043266.1 CDS Rsph17029_1384 NC_009049.1 1438973 1440193 R PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2726 multidrug/metabolite efflux pump, major facilitator superfamily (MFS); major facilitator superfamily transporter complement(1438973..1440193) Rhodobacter sphaeroides ATCC 17029 4897486 YP_001043267.1 CDS Rsph17029_1385 NC_009049.1 1440331 1440960 D PFAM: HhH-GPD family protein; KEGG: rsp:RSP_2727 probable 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; HhH-GPD family protein 1440331..1440960 Rhodobacter sphaeroides ATCC 17029 4897531 YP_001043268.1 CDS Rsph17029_1386 NC_009049.1 1440957 1441619 D PFAM: phospholipase/Carboxylesterase; KEGG: rsp:RSP_2728 phospholipase/carboxylesterase; phospholipase/carboxylesterase 1440957..1441619 Rhodobacter sphaeroides ATCC 17029 4897593 YP_001043269.1 CDS Rsph17029_1387 NC_009049.1 1442087 1442671 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2729 probable restriction endonuclease; HNH endonuclease 1442087..1442671 Rhodobacter sphaeroides ATCC 17029 4897577 YP_001043270.1 CDS Rsph17029_1388 NC_009049.1 1442964 1443290 D PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_2730 transcriptional regulator, ArsR family; regulatory protein ArsR 1442964..1443290 Rhodobacter sphaeroides ATCC 17029 4897631 YP_001043271.1 CDS Rsph17029_1389 NC_009049.1 1443283 1443576 D hypothetical protein 1443283..1443576 Rhodobacter sphaeroides ATCC 17029 4897623 YP_001043272.1 CDS Rsph17029_1390 NC_009049.1 1443573 1444286 D PFAM: NADPH-dependent FMN reductase; KEGG: rsp:RSP_2731 arsenical resistance protein, ArsH; NADPH-dependent FMN reductase 1443573..1444286 Rhodobacter sphaeroides ATCC 17029 4897786 YP_001043273.1 CDS Rsph17029_1391 NC_009049.1 1444283 1445446 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2732 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 1444283..1445446 Rhodobacter sphaeroides ATCC 17029 4897784 YP_001043274.1 CDS Rsph17029_1392 NC_009049.1 1445663 1447114 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1445663..1447114 Rhodobacter sphaeroides ATCC 17029 4897779 YP_001043275.1 CDS Rsph17029_1393 NC_009049.1 1447153 1447824 D TIGRFAM: 6-phosphogluconolactonase; KEGG: rsp:RSP_2735 6-phosphogluconolactonase; 6-phosphogluconolactonase 1447153..1447824 Rhodobacter sphaeroides ATCC 17029 4897851 YP_001043276.1 CDS pgi NC_009049.1 1447844 1449445 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1447844..1449445 Rhodobacter sphaeroides ATCC 17029 4897844 YP_001043277.1 CDS Rsph17029_1395 NC_009049.1 1449671 1450018 R PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_2737 putative ssRNA endoribonuclease L-PSP; endoribonuclease L-PSP complement(1449671..1450018) Rhodobacter sphaeroides ATCC 17029 4897796 YP_001043278.1 CDS Rsph17029_1396 NC_009049.1 1450339 1451286 D PFAM: Rhodanese domain protein; KEGG: rsp:RSP_2738 probable rhodanese-related sulfurtransferase; rhodanese domain-containing protein 1450339..1451286 Rhodobacter sphaeroides ATCC 17029 4897915 YP_001043279.1 CDS Rsph17029_1397 NC_009049.1 1451297 1452424 D PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rsp:RSP_2739 hypothetical protein; hypothetical protein 1451297..1452424 Rhodobacter sphaeroides ATCC 17029 4897894 YP_001043280.1 CDS Rsph17029_1398 NC_009049.1 1452421 1452588 D hypothetical protein 1452421..1452588 Rhodobacter sphaeroides ATCC 17029 4897891 YP_001043281.1 CDS Rsph17029_1399 NC_009049.1 1452863 1454119 D KEGG: rsp:RSP_2740 putative glucose/sorbosone dehydrogenase; putative glucose/sorbosone dehydrogenase 1452863..1454119 Rhodobacter sphaeroides ATCC 17029 4897873 YP_001043282.1 CDS Rsph17029_1400 NC_009049.1 1454116 1454712 D KEGG: rsp:RSP_2741 class I diheme cytochrome c4; class I diheme cytochrome c4 1454116..1454712 Rhodobacter sphaeroides ATCC 17029 4897866 YP_001043283.1 CDS Rsph17029_1401 NC_009049.1 1454738 1455067 R KEGG: rsp:RSP_6067 hypothetical protein; hypothetical protein complement(1454738..1455067) Rhodobacter sphaeroides ATCC 17029 4897982 YP_001043284.1 CDS Rsph17029_1402 NC_009049.1 1455215 1456429 D KEGG: rsp:RSP_2742 hypothetical protein; hypothetical protein 1455215..1456429 Rhodobacter sphaeroides ATCC 17029 4897978 YP_001043285.1 CDS Rsph17029_1403 NC_009049.1 1456463 1457230 R KEGG: rsp:RSP_2744 hypothetical protein; hypothetical protein complement(1456463..1457230) Rhodobacter sphaeroides ATCC 17029 4898001 YP_001043286.1 CDS Rsph17029_1404 NC_009049.1 1457396 1458364 D KEGG: rsp:RSP_2745 hypothetical protein; hypothetical protein 1457396..1458364 Rhodobacter sphaeroides ATCC 17029 4898007 YP_001043287.1 CDS Rsph17029_1405 NC_009049.1 1458355 1459362 R KEGG: rsp:RSP_2746 hypothetical protein; hypothetical protein complement(1458355..1459362) Rhodobacter sphaeroides ATCC 17029 4897999 YP_001043288.1 CDS Rsph17029_1406 NC_009049.1 1459407 1460654 R KEGG: rsp:RSP_2747 possible glycosyltransferase; putative glycosyltransferase complement(1459407..1460654) Rhodobacter sphaeroides ATCC 17029 4898080 YP_001043289.1 CDS Rsph17029_1407 NC_009049.1 1460970 1461365 R PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: rsp:RSP_2748 possible transcriptional regulator, CopG family; hypothetical protein complement(1460970..1461365) Rhodobacter sphaeroides ATCC 17029 4898048 YP_001043290.1 CDS Rsph17029_1408 NC_009049.1 1461438 1461587 D hypothetical protein 1461438..1461587 Rhodobacter sphaeroides ATCC 17029 4898086 YP_001043291.1 CDS Rsph17029_1409 NC_009049.1 1462238 1464259 R PFAM: ferredoxin; KEGG: rsp:RSP_2766 uncharacterized metal-binding protein; ferredoxin complement(1462238..1464259) Rhodobacter sphaeroides ATCC 17029 4897690 YP_001043292.1 CDS Rsph17029_1410 NC_009049.1 1464394 1465368 R catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein; methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase complement(1464394..1465368) Rhodobacter sphaeroides ATCC 17029 4896721 YP_001043293.1 CDS Rsph17029_1411 NC_009049.1 1465365 1466294 R KEGG: rsp:RSP_2769 probable 5,10-methylenetetrahydrofolate reductase; putative 5,10-methylenetetrahydrofolate reductase complement(1465365..1466294) Rhodobacter sphaeroides ATCC 17029 4896087 YP_001043294.1 CDS Rsph17029_1412 NC_009049.1 1466323 1466616 R KEGG: rsp:RSP_2770 hypothetical protein; hypothetical protein complement(1466323..1466616) Rhodobacter sphaeroides ATCC 17029 4896746 YP_001043295.1 CDS Rsph17029_1413 NC_009049.1 1466886 1468022 D PFAM: Ppx/GppA phosphatase; KEGG: rsp:RSP_2771 putative exopolyphosphatase; Ppx/GppA phosphatase 1466886..1468022 Rhodobacter sphaeroides ATCC 17029 4897542 YP_001043296.1 CDS Rsph17029_1414 NC_009049.1 1468019 1468753 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rsp:RSP_2772 23S rRNA methylase; ribosomal RNA methyltransferase RrmJ/FtsJ 1468019..1468753 Rhodobacter sphaeroides ATCC 17029 4897442 YP_001043297.1 CDS Rsph17029_1415 NC_009049.1 1468904 1469470 R PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rsp:RSP_2773 hypothetical protein; hypothetical protein complement(1468904..1469470) Rhodobacter sphaeroides ATCC 17029 4897034 YP_001043298.1 CDS Rsph17029_1416 NC_009049.1 1469759 1471399 D PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_2774 hypothetical protein; peptidoglycan binding domain-containing protein 1469759..1471399 Rhodobacter sphaeroides ATCC 17029 4897244 YP_001043299.1 CDS Rsph17029_1417 NC_009049.1 1471448 1472539 D TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; KEGG: rsp:RSP_2775 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 1471448..1472539 Rhodobacter sphaeroides ATCC 17029 4898072 YP_001043300.1 CDS Rsph17029_1418 NC_009049.1 1472573 1472839 D PFAM: phosphopantetheine-binding; KEGG: rsp:RSP_2776 acyl carrier protein, AcpP; phosphopantetheine-binding protein 1472573..1472839 Rhodobacter sphaeroides ATCC 17029 4896547 YP_001043301.1 CDS Rsph17029_1419 NC_009049.1 1472851 1474059 D PFAM: beta-ketoacyl synthase; KEGG: rsp:RSP_2777 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase 1472851..1474059 Rhodobacter sphaeroides ATCC 17029 4897443 YP_001043302.1 CDS Rsph17029_1420 NC_009049.1 1474127 1474795 R PFAM: Invasion associated locus B family protein; KEGG: rsp:RSP_2778 hypothetical protein; invasion associated locus B family protein complement(1474127..1474795) Rhodobacter sphaeroides ATCC 17029 4896520 YP_001043303.1 CDS Rsph17029_1421 NC_009049.1 1475330 1476796 R PFAM: Catalase domain protein; KEGG: rsp:RSP_2779 catalase; catalase complement(1475330..1476796) Rhodobacter sphaeroides ATCC 17029 4897116 YP_001043304.1 CDS Rsph17029_1422 NC_009049.1 1476898 1477824 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2780 transcriptional regulator, OxyR, LysR family; LysR family transcriptional regulator 1476898..1477824 Rhodobacter sphaeroides ATCC 17029 4895679 YP_001043305.1 CDS Rsph17029_1423 NC_009049.1 1477853 1478401 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_2781 peroxiredoxin/glutaredoxin family protein; redoxin domain-containing protein complement(1477853..1478401) Rhodobacter sphaeroides ATCC 17029 4897448 YP_001043306.1 CDS Rsph17029_1424 NC_009049.1 1478563 1479294 R TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: rsp:RSP_2782 aquaporin z, major intrinsic protein (MIP) family; MIP family channel protein complement(1478563..1479294) Rhodobacter sphaeroides ATCC 17029 4897548 YP_001043307.1 CDS Rsph17029_1425 NC_009049.1 1479431 1480393 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1479431..1480393 Rhodobacter sphaeroides ATCC 17029 4897650 YP_001043308.1 CDS Rsph17029_1426 NC_009049.1 1480466 1481356 R KEGG: rsp:RSP_2784 diheme class I cytochrome c; diheme class I cytochrome c complement(1480466..1481356) Rhodobacter sphaeroides ATCC 17029 4897057 YP_001043309.1 CDS Rsph17029_1427 NC_009049.1 1481360 1481821 R PFAM: cytochrome c, class II; KEGG: rsp:RSP_2785 cytochrome c-554; cytochrome c, class II complement(1481360..1481821) Rhodobacter sphaeroides ATCC 17029 4897459 YP_001043310.1 CDS Rsph17029_1428 NC_009049.1 1482228 1482773 R KEGG: rsp:RSP_2786 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(1482228..1482773) Rhodobacter sphaeroides ATCC 17029 4897571 YP_001043311.1 CDS Rsph17029_1429 NC_009049.1 1482865 1483317 D PFAM: cyclase/dehydrase; KEGG: rsp:RSP_2787 hypothetical protein; cyclase/dehydrase 1482865..1483317 Rhodobacter sphaeroides ATCC 17029 4897288 YP_001043312.1 CDS Rsph17029_1430 NC_009049.1 1483749 1484459 D PFAM: ribulose-phosphate 3-epimerase; KEGG: rsp:RSP_2864 pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 1483749..1484459 Rhodobacter sphaeroides ATCC 17029 4897396 YP_001043313.1 CDS Rsph17029_1431 NC_009049.1 1484541 1485725 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_2862 glycine/D-amino acid oxidase (deaminating); FAD dependent oxidoreductase complement(1484541..1485725) Rhodobacter sphaeroides ATCC 17029 4897647 YP_001043314.1 CDS tsf NC_009049.1 1486113 1487009 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1486113..1487009) Rhodobacter sphaeroides ATCC 17029 4897055 YP_001043315.1 CDS rpsB NC_009049.1 1487091 1487846 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1487091..1487846) Rhodobacter sphaeroides ATCC 17029 4898083 YP_001043316.1 CDS Rsph17029_1434 NC_009049.1 1488101 1488988 D PFAM: PfkB domain protein; KEGG: rsp:RSP_6216 putative carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein 1488101..1488988 Rhodobacter sphaeroides ATCC 17029 4895207 YP_001043317.1 CDS Rsph17029_1435 NC_009049.1 1488985 1489896 D PFAM: Indigoidine synthase A family protein; KEGG: rsp:RSP_2858 IndA involved in pigment biosynthesis; indigoidine synthase A family protein 1488985..1489896 Rhodobacter sphaeroides ATCC 17029 4897282 YP_001043318.1 CDS Rsph17029_1436 NC_009049.1 1489923 1490696 R TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_2857 D-beta-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase complement(1489923..1490696) Rhodobacter sphaeroides ATCC 17029 4895853 YP_001043319.1 CDS Rsph17029_1437 NC_009049.1 1490987 1492798 D PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_2856 putative oligopeptide ABC transporter, periplasmic-binding protein; extracellular solute-binding protein 1490987..1492798 Rhodobacter sphaeroides ATCC 17029 4896444 YP_001043320.1 CDS Rsph17029_1438 NC_009049.1 1493022 1496288 R PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2855 cation/multidrug efflux pump, RND superfamily; acriflavin resistance protein complement(1493022..1496288) Rhodobacter sphaeroides ATCC 17029 4898029 YP_001043321.1 CDS Rsph17029_1439 NC_009049.1 1496299 1497471 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2854 cation/multidrug efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit complement(1496299..1497471) Rhodobacter sphaeroides ATCC 17029 4895537 YP_001043322.1 CDS Rsph17029_1440 NC_009049.1 1497459 1498100 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_2853 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1497459..1498100) Rhodobacter sphaeroides ATCC 17029 4895872 YP_001043323.1 CDS Rsph17029_1441 NC_009049.1 1498299 1498943 D PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_2852 predicted polyketide biosynthesis associated protein; DSBA oxidoreductase 1498299..1498943 Rhodobacter sphaeroides ATCC 17029 4896421 YP_001043324.1 CDS Rsph17029_1442 NC_009049.1 1498940 1500157 D TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2851 multidrug (bicyclomycin) efflux pump, major facilitator superfamily (MFS); Bcr/CflA subfamily drug resistance transporter 1498940..1500157 Rhodobacter sphaeroides ATCC 17029 4896115 YP_001043325.1 CDS Rsph17029_1443 NC_009049.1 1500420 1503917 R KEGG: rsp:RSP_2850 transcription-repair coupling factor (helicase); TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor complement(1500420..1503917) Rhodobacter sphaeroides ATCC 17029 4897023 YP_001043326.1 CDS Rsph17029_1444 NC_009049.1 1503995 1504561 R KEGG: rsp:RSP_2849 hypothetical membrane protein; hypothetical protein complement(1503995..1504561) Rhodobacter sphaeroides ATCC 17029 4896868 YP_001043327.1 CDS Rsph17029_1445 NC_009049.1 1504654 1505658 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1504654..1505658 Rhodobacter sphaeroides ATCC 17029 4897260 YP_001043328.1 CDS Rsph17029_1446 NC_009049.1 1505785 1506342 D KEGG: rsp:RSP_2847 hypothetical protein; hypothetical protein 1505785..1506342 Rhodobacter sphaeroides ATCC 17029 4898036 YP_001043329.1 CDS Rsph17029_1447 NC_009049.1 1506545 1507411 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rsp:RSP_2846 putative 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase complement(1506545..1507411) Rhodobacter sphaeroides ATCC 17029 4897561 YP_001043330.1 CDS Rsph17029_1448 NC_009049.1 1507488 1509959 D PFAM: peptidase S45, penicillin amidase; KEGG: rsp:RSP_2845 putative penicillin acylase (penicillin amidase); penicillin amidase 1507488..1509959 Rhodobacter sphaeroides ATCC 17029 4895453 YP_001043331.1 CDS Rsph17029_1449 NC_009049.1 1510014 1510196 R hypothetical protein complement(1510014..1510196) Rhodobacter sphaeroides ATCC 17029 4895659 YP_001043332.1 CDS Rsph17029_1450 NC_009049.1 1510423 1511766 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: rsp:RSP_2844 putative GTP-binding protein; small GTP-binding protein complement(1510423..1511766) Rhodobacter sphaeroides ATCC 17029 4895627 YP_001043333.1 CDS hfq NC_009049.1 1511768 1512001 R Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq complement(1511768..1512001) Rhodobacter sphaeroides ATCC 17029 4897585 YP_001043334.1 CDS Rsph17029_1452 NC_009049.1 1512159 1513670 R PFAM: cation transporter; KEGG: rsp:RSP_2842 potassium uptake transporter, transmembrane subunit, TrkH; cation transporter complement(1512159..1513670) Rhodobacter sphaeroides ATCC 17029 4897086 YP_001043335.1 CDS trkA NC_009049.1 1513672 1515048 R involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein complement(1513672..1515048) Rhodobacter sphaeroides ATCC 17029 4895562 YP_001043336.1 CDS Rsph17029_1454 NC_009049.1 1515103 1516533 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_2840 nitrogen assimilation transcriptional regulator, NtrX; two component, sigma54 specific, Fis family transcriptional regulator complement(1515103..1516533) Rhodobacter sphaeroides ATCC 17029 4896498 YP_001043337.1 CDS Rsph17029_1455 NC_009049.1 1516530 1518791 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rsp:RSP_2839 nitrogen regulation protein, NtrY, signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(1516530..1518791) Rhodobacter sphaeroides ATCC 17029 4897186 YP_001043338.1 CDS Rsph17029_1456 NC_009049.1 1518891 1520258 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_2838 nitrogen metabolism transcriptional regulator, NtrC; two component, sigma54 specific, Fis family transcriptional regulator complement(1518891..1520258) Rhodobacter sphaeroides ATCC 17029 4896918 YP_001043339.1 CDS Rsph17029_1457 NC_009049.1 1520258 1521364 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rsp:RSP_2837 nitrogen regulation protein, NtrB signal transduction histidine kinase; signal transduction histidine kinase, nitrogen specific, NtrB complement(1520258..1521364) Rhodobacter sphaeroides ATCC 17029 4898069 YP_001043340.1 CDS Rsph17029_1458 NC_009049.1 1521361 1522341 R TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: rsp:RSP_2836 tRNA-dihydrouridine synthase, nifR3; nifR3 family TIM-barrel protein complement(1521361..1522341) Rhodobacter sphaeroides ATCC 17029 4896454 YP_001043341.1 CDS Rsph17029_1459 NC_009049.1 1522555 1523232 D TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rsp:RSP_2835 probable 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (YgbP); 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1522555..1523232 Rhodobacter sphaeroides ATCC 17029 4896161 YP_001043342.1 CDS ispF NC_009049.1 1523341 1523820 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1523341..1523820 Rhodobacter sphaeroides ATCC 17029 4896911 YP_001043343.1 CDS Rsph17029_1461 NC_009049.1 1523817 1524314 D PFAM: phosphatidylglycerophosphatase A; KEGG: rsp:RSP_2834 putative phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 1523817..1524314 Rhodobacter sphaeroides ATCC 17029 4897496 YP_001043344.1 CDS Rsph17029_1462 NC_009049.1 1524311 1524796 D PFAM: CinA domain protein; KEGG: rsp:RSP_2833 putative competence-damaged inducible protein; CinA domain-containing protein 1524311..1524796 Rhodobacter sphaeroides ATCC 17029 4897324 YP_001043345.1 CDS Rsph17029_1463 NC_009049.1 1524826 1526004 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_2832 predicted conserved flavoprotein; hypothetical protein complement(1524826..1526004) Rhodobacter sphaeroides ATCC 17029 4897567 YP_001043346.1 CDS Rsph17029_1464 NC_009049.1 1526342 1526950 R catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1526342..1526950) Rhodobacter sphaeroides ATCC 17029 4897802 YP_001043347.1 CDS Rsph17029_1465 NC_009049.1 1526947 1528176 R PFAM: NnrS family protein; KEGG: rsp:RSP_2830 hypothetical protein; NnrS family protein complement(1526947..1528176) Rhodobacter sphaeroides ATCC 17029 4898082 YP_001043348.1 CDS Rsph17029_1466 NC_009049.1 1528584 1528943 D PFAM: protein of unknown function DUF1636; KEGG: rsp:RSP_2829 hypothetical protein; hypothetical protein 1528584..1528943 Rhodobacter sphaeroides ATCC 17029 4897347 YP_001043349.1 CDS Rsph17029_1467 NC_009049.1 1528940 1529977 D TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rsp:RSP_2828 cobalamin synthesis protein CobW; cobalamin biosynthesis protein CobW 1528940..1529977 Rhodobacter sphaeroides ATCC 17029 4896622 YP_001043350.1 CDS cobN NC_009049.1 1529981 1533217 D with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1529981..1533217 Rhodobacter sphaeroides ATCC 17029 4897625 YP_001043351.1 CDS cobH NC_009049.1 1533217 1533846 D catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 1533217..1533846 Rhodobacter sphaeroides ATCC 17029 4897250 YP_001043352.1 CDS Rsph17029_1470 NC_009049.1 1533846 1534577 D TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2826 putative precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 1533846..1534577 Rhodobacter sphaeroides ATCC 17029 4896058 YP_001043353.1 CDS Rsph17029_1471 NC_009049.1 1534574 1535308 D TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2824 putative precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 1534574..1535308 Rhodobacter sphaeroides ATCC 17029 4895681 YP_001043354.1 CDS Rsph17029_1472 NC_009049.1 1535284 1536027 R CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase complement(1535284..1536027) Rhodobacter sphaeroides ATCC 17029 4897514 YP_001043355.1 CDS Rsph17029_1473 NC_009049.1 1536026 1537189 D KEGG: rsp:RSP_2823 putative precorrin-6y C5,15-methyltransferase; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6Y C5,15-methyltransferase subunit CbiT 1536026..1537189 Rhodobacter sphaeroides ATCC 17029 4897500 YP_001043356.1 CDS Rsph17029_1474 NC_009049.1 1537186 1537560 D KEGG: rsp:RSP_2822 putative precorrin methylase; putative precorrin methylase 1537186..1537560 Rhodobacter sphaeroides ATCC 17029 4895922 YP_001043357.1 CDS Rsph17029_1475 NC_009049.1 1537557 1538339 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rsp:RSP_2821 putative precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase 1537557..1538339 Rhodobacter sphaeroides ATCC 17029 4895912 YP_001043358.1 CDS Rsph17029_1476 NC_009049.1 1538336 1539061 D catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 1538336..1539061 Rhodobacter sphaeroides ATCC 17029 4896546 YP_001043359.1 CDS Rsph17029_1477 NC_009049.1 1539152 1539916 D catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 1539152..1539916 Rhodobacter sphaeroides ATCC 17029 4897203 YP_001043360.1 CDS aroB NC_009049.1 1540363 1541475 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1540363..1541475) Rhodobacter sphaeroides ATCC 17029 4895071 YP_001043361.1 CDS Rsph17029_1479 NC_009049.1 1541472 1542053 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(1541472..1542053) Rhodobacter sphaeroides ATCC 17029 4898089 YP_001043362.1 CDS Rsph17029_1480 NC_009049.1 1542330 1543898 D KEGG: rsp:RSP_2816 hypothetical protein; hypothetical protein 1542330..1543898 Rhodobacter sphaeroides ATCC 17029 4897962 YP_001043363.1 CDS Rsph17029_1481 NC_009049.1 1543898 1544833 D PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rsp:RSP_2815 probable integrase/recombinase XerD; phage integrase family protein 1543898..1544833 Rhodobacter sphaeroides ATCC 17029 4897925 YP_001043364.1 CDS Rsph17029_1482 NC_009049.1 1544902 1546230 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rsp:RSP_2814 hypothetical protein with CBS domain; hypothetical protein 1544902..1546230 Rhodobacter sphaeroides ATCC 17029 4897831 YP_001043365.1 CDS Rsph17029_1483 NC_009049.1 1546200 1547336 R KEGG: rsp:RSP_6073 hypothetical protein; hypothetical protein complement(1546200..1547336) Rhodobacter sphaeroides ATCC 17029 4897723 YP_001043366.1 CDS Rsph17029_1484 NC_009049.1 1547554 1547931 D KEGG: rsp:RSP_6226 hypothetical protein; hypothetical protein 1547554..1547931 Rhodobacter sphaeroides ATCC 17029 4897453 YP_001043367.1 CDS Rsph17029_1485 NC_009049.1 1548068 1549609 R PFAM: trimethylamine methyltransferase; KEGG: rsp:RSP_2813 putative trimethylamine methyltransferase protein; trimethylamine methyltransferase complement(1548068..1549609) Rhodobacter sphaeroides ATCC 17029 4897111 YP_001043368.1 CDS Rsph17029_1486 NC_009049.1 1549725 1550330 R KEGG: rsp:RSP_2812 hypothetical protein; hypothetical protein complement(1549725..1550330) Rhodobacter sphaeroides ATCC 17029 4896891 YP_001043369.1 CDS Rsph17029_1487 NC_009049.1 1550333 1551298 R PFAM: Mammalian cell entry related domain protein; KEGG: rsp:RSP_2811 putative ABC transporter, periplasmic substrate-binding protein; hypothetical protein complement(1550333..1551298) Rhodobacter sphaeroides ATCC 17029 4896645 YP_001043370.1 CDS Rsph17029_1488 NC_009049.1 1551302 1552075 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2810 ABC transporter, ATPase subunit; ABC transporter complement(1551302..1552075) Rhodobacter sphaeroides ATCC 17029 4896292 YP_001043371.1 CDS Rsph17029_1489 NC_009049.1 1552075 1553175 R PFAM: protein of unknown function DUF140; KEGG: rsp:RSP_2809 ABC transporter, inner membrane subunit; hypothetical protein complement(1552075..1553175) Rhodobacter sphaeroides ATCC 17029 4895852 YP_001043372.1 CDS Rsph17029_1490 NC_009049.1 1553678 1553932 D KEGG: rsp:RSP_2808 hypothetical protein; hypothetical protein 1553678..1553932 Rhodobacter sphaeroides ATCC 17029 4895527 YP_001043373.1 CDS Rsph17029_1491 NC_009049.1 1553937 1554485 D PFAM: cytochrome B561; KEGG: rsp:RSP_2807 putative cytochrome b; cytochrome B561 1553937..1554485 Rhodobacter sphaeroides ATCC 17029 4895542 YP_001043374.1 CDS Rsph17029_1492 NC_009049.1 1554676 1555080 D PFAM: phage integrase family protein; KEGG: sit:TM1040_0776 phage integrase; phage integrase family protein 1554676..1555080 Rhodobacter sphaeroides ATCC 17029 4895415 YP_001043375.1 CDS Rsph17029_1493 NC_009049.1 1555642 1558050 R KEGG: rsp:RSP_2806 probable ATP-dependent protease La protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1555642..1558050) Rhodobacter sphaeroides ATCC 17029 4897187 YP_001043376.1 CDS Rsph17029_1494 NC_009049.1 1558313 1559401 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rsp:RSP_2805 putative NADH-flavin oxidoreductase; NADH:flavin oxidoreductase complement(1558313..1559401) Rhodobacter sphaeroides ATCC 17029 4897860 YP_001043377.1 CDS tgt NC_009049.1 1559508 1560638 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1559508..1560638) Rhodobacter sphaeroides ATCC 17029 4897563 YP_001043378.1 CDS Rsph17029_1496 NC_009049.1 1560804 1563881 R PFAM: acriflavin resistance protein; KEGG: rsp:RSP_2803 multidrug/cation efflux pump, RND superfamily; acriflavin resistance protein complement(1560804..1563881) Rhodobacter sphaeroides ATCC 17029 4897013 YP_001043379.1 CDS Rsph17029_1497 NC_009049.1 1563889 1565064 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_2802 multidrug/cation efflux pump, membrane fusion protein subunit; RND family efflux transporter MFP subunit complement(1563889..1565064) Rhodobacter sphaeroides ATCC 17029 4895091 YP_001043380.1 CDS Rsph17029_1498 NC_009049.1 1565210 1565779 D PFAM: regulatory protein, TetR; KEGG: rsp:RSP_2801 transcriptional regulator, TetR family; TetR family transcriptional regulator 1565210..1565779 Rhodobacter sphaeroides ATCC 17029 4897510 YP_001043381.1 CDS Rsph17029_1499 NC_009049.1 1566357 1566830 D KEGG: rsp:RSP_6075 hypothetical protein; hypothetical protein 1566357..1566830 Rhodobacter sphaeroides ATCC 17029 4897932 YP_001043382.1 CDS Rsph17029_1500 NC_009049.1 1566875 1568812 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_2800 putative AcoR, transcriptional activator of acetoin/glycerol metabolism; Fis family GAF modulated sigma54 specific transcriptional regulator 1566875..1568812 Rhodobacter sphaeroides ATCC 17029 4897798 YP_001043383.1 CDS Rsph17029_1501 NC_009049.1 1568854 1569948 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_2799 putative zinc-containing alcohol dehydrogenase; alcohol dehydrogenase complement(1568854..1569948) Rhodobacter sphaeroides ATCC 17029 4895260 YP_001043384.1 CDS groEL NC_009049.1 1569999 1571630 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(1569999..1571630) Rhodobacter sphaeroides ATCC 17029 4895748 YP_001043385.1 CDS Rsph17029_1503 NC_009049.1 1571714 1572514 R PFAM: protein of unknown function DUF59; KEGG: rsp:RSP_2797 hypothetical protein of unknown function; hypothetical protein complement(1571714..1572514) Rhodobacter sphaeroides ATCC 17029 4896268 YP_001043386.1 CDS Rsph17029_1504 NC_009049.1 1572519 1573541 R PFAM: amidohydrolase 2; KEGG: rsp:RSP_2796 hypothetical protein; amidohydrolase 2 complement(1572519..1573541) Rhodobacter sphaeroides ATCC 17029 4896897 YP_001043387.1 CDS Rsph17029_1505 NC_009049.1 1573602 1573970 R PFAM: monooxygenase component MmoB/DmpM; KEGG: rsp:RSP_2795 putative regulatory protein of multicomponent monooxygenase; monooxygenase component MmoB/DmpM complement(1573602..1573970) Rhodobacter sphaeroides ATCC 17029 4895317 YP_001043388.1 CDS Rsph17029_1506 NC_009049.1 1573982 1575040 R PFAM: methane/phenol/toluene hydroxylase; KEGG: rsp:RSP_2794 putative monooxygenase beta subunit; methane/phenol/toluene hydroxylase complement(1573982..1575040) Rhodobacter sphaeroides ATCC 17029 4895470 YP_001043389.1 CDS Rsph17029_1507 NC_009049.1 1575071 1576168 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rsp:RSP_2793 putative reductase component of monooxygenase; oxidoreductase FAD/NAD(P)-binding subunit complement(1575071..1576168) Rhodobacter sphaeroides ATCC 17029 4895560 YP_001043390.1 CDS Rsph17029_1508 NC_009049.1 1576239 1577906 R PFAM: methane/phenol/toluene hydroxylase; KEGG: rsp:RSP_2792 putative monooxygenase alpha subunit; methane monooxygenase complement(1576239..1577906) Rhodobacter sphaeroides ATCC 17029 4895355 YP_001043391.1 CDS Rsph17029_1509 NC_009049.1 1578528 1578992 D KEGG: rsp:RSP_2791 hypothetical protein; hypothetical protein 1578528..1578992 Rhodobacter sphaeroides ATCC 17029 4897470 YP_001043392.1 CDS Rsph17029_1510 NC_009049.1 1578989 1579210 D KEGG: rsp:RSP_2790 hypothetical protein; hypothetical protein 1578989..1579210 Rhodobacter sphaeroides ATCC 17029 4897372 YP_001043393.1 CDS Rsph17029_1511 NC_009049.1 1579207 1580292 D KEGG: rsp:RSP_2789 hypothetical protein; hypothetical protein 1579207..1580292 Rhodobacter sphaeroides ATCC 17029 4897828 YP_001043394.1 CDS Rsph17029_1512 NC_009049.1 1580322 1580513 D KEGG: rsp:RSP_6076 hypothetical protein; hypothetical protein 1580322..1580513 Rhodobacter sphaeroides ATCC 17029 4897748 YP_001043395.1 CDS Rsph17029_1513 NC_009049.1 1580533 1581807 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_2867 sigma-54 factor family protein; RNA polymerase sigma 54 subunit RpoN 1580533..1581807 Rhodobacter sphaeroides ATCC 17029 4897128 YP_001043396.1 CDS Rsph17029_1514 NC_009049.1 1581968 1583416 R KEGG: rsp:RSP_2868 putative inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(1581968..1583416) Rhodobacter sphaeroides ATCC 17029 4897906 YP_001043397.1 CDS Rsph17029_1515 NC_009049.1 1583612 1584586 R KEGG: rsp:RSP_2869 possible tellurite resistance protein; putative tellurite resistance protein complement(1583612..1584586) Rhodobacter sphaeroides ATCC 17029 4897029 YP_001043398.1 CDS Rsph17029_1516 NC_009049.1 1585116 1586225 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_2870 ABC alpha-glucoside transporter, ATPase subunit AglK; ABC transporter complement(1585116..1586225) Rhodobacter sphaeroides ATCC 17029 4896948 YP_001043399.1 CDS Rsph17029_1517 NC_009049.1 1586250 1587371 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2871 ABC alpha-glucoside transporter, inner membrane subunit AglG; binding-protein-dependent transport system inner membrane protein complement(1586250..1587371) Rhodobacter sphaeroides ATCC 17029 4896073 YP_001043400.1 CDS Rsph17029_1518 NC_009049.1 1587371 1588363 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_2872 ABC alpha-glucoside transporter, inner membrane subunit AglF; binding-protein-dependent transport system inner membrane protein complement(1587371..1588363) Rhodobacter sphaeroides ATCC 17029 4896101 YP_001043401.1 CDS Rsph17029_1519 NC_009049.1 1588440 1589792 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2873 ABC alpha-glucoside transporter, perplasmic substrate-binding protein; extracellular solute-binding protein complement(1588440..1589792) Rhodobacter sphaeroides ATCC 17029 4895416 YP_001043402.1 CDS Rsph17029_1520 NC_009049.1 1590131 1591453 D PFAM: glycoside hydrolase, family 1; KEGG: rsp:RSP_2874 putative beta-glucosidase A; Beta-glucosidase 1590131..1591453 Rhodobacter sphaeroides ATCC 17029 4897834 YP_001043403.1 CDS Rsph17029_1521 NC_009049.1 1591472 1592425 D PFAM: Glucokinase; KEGG: rsp:RSP_2875 putative glucokinase; glucokinase 1591472..1592425 Rhodobacter sphaeroides ATCC 17029 4895278 YP_001043404.1 CDS Rsph17029_1522 NC_009049.1 1592616 1593401 R PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rsp:RSP_2876 putative carbon monoxide dehydrogenase medium chain; molybdopterin dehydrogenase complement(1592616..1593401) Rhodobacter sphaeroides ATCC 17029 4896492 YP_001043405.1 CDS Rsph17029_1523 NC_009049.1 1593412 1595784 R PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_2877 putative carbon monoxide dehydrogenase large chain; carbon monoxide dehydrogenase complement(1593412..1595784) Rhodobacter sphaeroides ATCC 17029 4896716 YP_001043406.1 CDS Rsph17029_1524 NC_009049.1 1595813 1596295 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_2878 putative carbon-monoxide dehydrogenase small chain; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(1595813..1596295) Rhodobacter sphaeroides ATCC 17029 4897058 YP_001043407.1 CDS Rsph17029_1525 NC_009049.1 1596324 1596854 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rsp:RSP_2879 hypothetical protein; carbon monoxide dehydrogenase subunit G complement(1596324..1596854) Rhodobacter sphaeroides ATCC 17029 4897097 YP_001043408.1 CDS Rsph17029_1526 NC_009049.1 1596987 1599188 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2880 signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(1596987..1599188) Rhodobacter sphaeroides ATCC 17029 4897777 YP_001043409.1 CDS Rsph17029_1527 NC_009049.1 1599259 1600431 R PFAM: domain of unknown function DUF1745; KEGG: rsp:RSP_2881 hypothetical protein; hypothetical protein complement(1599259..1600431) Rhodobacter sphaeroides ATCC 17029 4897959 YP_001043410.1 CDS Rsph17029_1528 NC_009049.1 1600529 1601209 R PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_2882 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(1600529..1601209) Rhodobacter sphaeroides ATCC 17029 4897211 YP_001043411.1 CDS Rsph17029_1529 NC_009049.1 1601528 1603162 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(1601528..1603162) Rhodobacter sphaeroides ATCC 17029 4897379 YP_001043412.1 CDS Rsph17029_1530 NC_009049.1 1603159 1605273 R KEGG: rsp:RSP_2884 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(1603159..1605273) Rhodobacter sphaeroides ATCC 17029 4897475 YP_001043413.1 CDS glgA NC_009049.1 1605270 1606724 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(1605270..1606724) Rhodobacter sphaeroides ATCC 17029 4895323 YP_001043414.1 CDS glgC NC_009049.1 1606821 1608092 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(1606821..1608092) Rhodobacter sphaeroides ATCC 17029 4895535 YP_001043415.1 CDS Rsph17029_1533 NC_009049.1 1608863 1611268 R KEGG: rsp:RSP_2887 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase complement(1608863..1611268) Rhodobacter sphaeroides ATCC 17029 4895357 YP_001043416.1 CDS Rsph17029_1534 NC_009049.1 1611782 1612216 D TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_2888 transcriptional regulator; BadM/Rrf2 family transcriptional regulator 1611782..1612216 Rhodobacter sphaeroides ATCC 17029 4895483 YP_001043417.1 CDS Rsph17029_1535 NC_009049.1 1612242 1612655 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: rsp:RSP_2889 transcriptional regulator; MerR family transcriptional regulator complement(1612242..1612655) Rhodobacter sphaeroides ATCC 17029 4896681 YP_001043418.1 CDS Rsph17029_1536 NC_009049.1 1612814 1615255 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_2890 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1612814..1615255) Rhodobacter sphaeroides ATCC 17029 4897685 YP_001043419.1 CDS Rsph17029_1537 NC_009049.1 1615406 1615606 D PFAM: Heavy metal transport/detoxification protein; KEGG: rsp:RSP_2891 putative copper chaperone; heavy metal transport/detoxification protein 1615406..1615606 Rhodobacter sphaeroides ATCC 17029 4895295 YP_001043420.1 CDS ndk NC_009049.1 1616538 1616960 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1616538..1616960) Rhodobacter sphaeroides ATCC 17029 4897772 YP_001043421.1 CDS Rsph17029_1539 NC_009049.1 1617088 1618935 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2895 putative ABC transporter, fused ATPase subunits; ABC transporter 1617088..1618935 Rhodobacter sphaeroides ATCC 17029 4896293 YP_001043422.1 CDS Rsph17029_1540 NC_009049.1 1618939 1619559 D PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: rsp:RSP_2896 multiple antibiotic transporter; multiple antibiotic resistance (MarC)-like proteins 1618939..1619559 Rhodobacter sphaeroides ATCC 17029 4896872 YP_001043423.1 CDS Rsph17029_1541 NC_009049.1 1619657 1620232 D KEGG: rsp:RSP_2897 hypothetical protein; hypothetical protein 1619657..1620232 Rhodobacter sphaeroides ATCC 17029 4896361 YP_001043424.1 CDS Rsph17029_1542 NC_009049.1 1620246 1620692 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(1620246..1620692) Rhodobacter sphaeroides ATCC 17029 4896969 YP_001043425.1 CDS Rsph17029_1543 NC_009049.1 1620808 1622277 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(1620808..1622277) Rhodobacter sphaeroides ATCC 17029 4895389 YP_001043426.1 CDS Rsph17029_1544 NC_009049.1 1622501 1623631 D PFAM: permease YjgP/YjgQ family protein; KEGG: rsp:RSP_2900 predicted permease; YjgP/YjgQ family permease 1622501..1623631 Rhodobacter sphaeroides ATCC 17029 4896888 YP_001043427.1 CDS Rsph17029_1545 NC_009049.1 1623628 1624722 D PFAM: permease YjgP/YjgQ family protein; KEGG: rsp:RSP_2901 putative permease; YjgP/YjgQ family permease 1623628..1624722 Rhodobacter sphaeroides ATCC 17029 4895927 YP_001043428.1 CDS Rsph17029_1546 NC_009049.1 1624722 1626866 D PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: rsp:RSP_2902 putative organic solvent tolerance protein; organic solvent tolerance protein 1624722..1626866 Rhodobacter sphaeroides ATCC 17029 4897004 YP_001043429.1 CDS Rsph17029_1547 NC_009049.1 1626883 1628190 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rsp:RSP_2903 probable PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1626883..1628190 Rhodobacter sphaeroides ATCC 17029 4895509 YP_001043430.1 CDS pdxA NC_009049.1 1628187 1629155 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1628187..1629155 Rhodobacter sphaeroides ATCC 17029 4895818 YP_001043431.1 CDS ksgA NC_009049.1 1629233 1630069 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1629233..1630069 Rhodobacter sphaeroides ATCC 17029 4895229 YP_001043432.1 CDS Rsph17029_1550 NC_009049.1 1630452 1631279 R KEGG: rsp:RSP_6078 hypothetical protein; hypothetical protein complement(1630452..1631279) Rhodobacter sphaeroides ATCC 17029 4897071 YP_001043433.1 CDS Rsph17029_1551 NC_009049.1 1631537 1632373 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; KEGG: rsp:RSP_2906 putative methylase; HemK family modification methylase complement(1631537..1632373) Rhodobacter sphaeroides ATCC 17029 4895848 YP_001043434.1 CDS prfA NC_009049.1 1632370 1633425 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(1632370..1633425) Rhodobacter sphaeroides ATCC 17029 4897096 YP_001043435.1 CDS Rsph17029_1553 NC_009049.1 1633573 1634025 R KEGG: rsp:RSP_2908 hypothetical protein; hypothetical protein complement(1633573..1634025) Rhodobacter sphaeroides ATCC 17029 4895831 YP_001043436.1 CDS Rsph17029_1554 NC_009049.1 1634022 1634987 R catalyzes the formation of putrescine from agmatine; agmatinase complement(1634022..1634987) Rhodobacter sphaeroides ATCC 17029 4895533 YP_001043437.1 CDS Rsph17029_1555 NC_009049.1 1635200 1636366 R KEGG: rsp:RSP_2910 predicted metal-dependent amidase/aminoacylase/carboxypeptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(1635200..1636366) Rhodobacter sphaeroides ATCC 17029 4895695 YP_001043438.1 CDS mazG NC_009049.1 1636577 1637383 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 1636577..1637383 Rhodobacter sphaeroides ATCC 17029 4896530 YP_001043439.1 CDS Rsph17029_1557 NC_009049.1 1637646 1638656 D PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_2913 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 1637646..1638656 Rhodobacter sphaeroides ATCC 17029 4896490 YP_001043440.1 CDS Rsph17029_1558 NC_009049.1 1638883 1639824 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rsp:RSP_2914 nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1638883..1639824 Rhodobacter sphaeroides ATCC 17029 4896436 YP_001043441.1 CDS Rsph17029_1559 NC_009049.1 1639893 1640933 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_2915 probable two-component sensor histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(1639893..1640933) Rhodobacter sphaeroides ATCC 17029 4895583 YP_001043442.1 CDS Rsph17029_1560 NC_009049.1 1641094 1641510 D KEGG: rsp:RSP_2916 hypothetical protein; hypothetical protein 1641094..1641510 Rhodobacter sphaeroides ATCC 17029 4896866 YP_001043443.1 CDS Rsph17029_1561 NC_009049.1 1641515 1642708 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: rsp:RSP_2917 putative cystathionine gamma-synthase beta-lyase; cystathionine gamma-lyase complement(1641515..1642708) Rhodobacter sphaeroides ATCC 17029 4895192 YP_001043444.1 CDS Rsph17029_1562 NC_009049.1 1642791 1643309 R KEGG: rsp:RSP_2918 predicted ferripyochelin binding protein; ferripyochelin binding protein complement(1642791..1643309) Rhodobacter sphaeroides ATCC 17029 4897007 YP_001043445.1 CDS gmk NC_009049.1 1643306 1643941 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1643306..1643941) Rhodobacter sphaeroides ATCC 17029 4897248 YP_001043446.1 CDS Rsph17029_1564 NC_009049.1 1643946 1644836 R PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: rsp:RSP_2920 hypothetical protein; hypothetical protein complement(1643946..1644836) Rhodobacter sphaeroides ATCC 17029 4895904 YP_001043447.1 CDS Rsph17029_1565 NC_009049.1 1645027 1645698 D PFAM: protein of unknown function DUF1457; KEGG: rsp:RSP_6079 hypothetical protein; hypothetical protein 1645027..1645698 Rhodobacter sphaeroides ATCC 17029 4897006 YP_001043448.1 CDS Rsph17029_1566 NC_009049.1 1645792 1647162 R KEGG: rsp:RSP_2921 phospho-2-dehydro-3-deoxyheptonate; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1645792..1647162) Rhodobacter sphaeroides ATCC 17029 4895358 YP_001043449.1 CDS Rsph17029_1567 NC_009049.1 1647307 1648320 D PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_2922 transcriptional regulator, AraC family; AraC family transcriptional regulator 1647307..1648320 Rhodobacter sphaeroides ATCC 17029 4897026 YP_001043450.1 CDS Rsph17029_1568 NC_009049.1 1648498 1649682 D PFAM: Extracellular ligand-binding receptor; KEGG: rsp:RSP_2923 ABC branched amino acid transporter family, periplasmic substrate-binding protein; extracellular ligand-binding receptor 1648498..1649682 Rhodobacter sphaeroides ATCC 17029 4895511 YP_001043451.1 CDS Rsph17029_1569 NC_009049.1 1649811 1650593 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2924 ABC branched-chain amino acid transporter family, ATPase subunit; ABC transporter 1649811..1650593 Rhodobacter sphaeroides ATCC 17029 4896228 YP_001043452.1 CDS Rsph17029_1570 NC_009049.1 1650686 1651396 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_2925 ABC branched-chain amino acid transporter family, ATPase subunit; ABC transporter 1650686..1651396 Rhodobacter sphaeroides ATCC 17029 4896266 YP_001043453.1 CDS Rsph17029_1571 NC_009049.1 1651400 1652410 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_2926 ABC branched-chain amino acid transporter family, inner membrane subunit; inner-membrane translocator 1651400..1652410 Rhodobacter sphaeroides ATCC 17029 4896486 YP_001043454.1 CDS Rsph17029_1572 NC_009049.1 1652407 1653702 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_2927 ABC branched-chain amino acid transporter family, inner membrane subunit; inner-membrane translocator 1652407..1653702 Rhodobacter sphaeroides ATCC 17029 4897299 YP_001043455.1 CDS Rsph17029_1573 NC_009049.1 1653707 1654306 D KEGG: rsp:RSP_2928 hypothetical protein; hypothetical protein 1653707..1654306 Rhodobacter sphaeroides ATCC 17029 4896491 YP_001043456.1 CDS Rsph17029_1574 NC_009049.1 1654364 1654987 R KEGG: rsp:RSP_2930 hypothetical protein; hypothetical protein complement(1654364..1654987) Rhodobacter sphaeroides ATCC 17029 4895254 YP_001043457.1 CDS Rsph17029_1575 NC_009049.1 1656074 1656538 D PFAM: Disulphide bond formation protein DsbB; KEGG: rsp:RSP_2929 putative disulfide bond formation protein DsbB; disulfide bond formation protein DsbB 1656074..1656538 Rhodobacter sphaeroides ATCC 17029 4897754 YP_001043458.1 CDS Rsph17029_1576 NC_009049.1 1656553 1657239 R PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rsp:RSP_2932 histidine utilization repressor, GntR family; UbiC transcription regulator-associated domain-containing protein complement(1656553..1657239) Rhodobacter sphaeroides ATCC 17029 4895288 YP_001043459.1 CDS Rsph17029_1577 NC_009049.1 1657239 1658606 R catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase complement(1657239..1658606) Rhodobacter sphaeroides ATCC 17029 4895387 YP_001043460.1 CDS Rsph17029_1578 NC_009049.1 1658633 1659865 D catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1658633..1659865 Rhodobacter sphaeroides ATCC 17029 4895458 YP_001043461.1 CDS Rsph17029_1579 NC_009049.1 1659865 1661388 D catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1659865..1661388 Rhodobacter sphaeroides ATCC 17029 4896028 YP_001043462.1 CDS Rsph17029_1580 NC_009049.1 1661399 1663081 D catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1661399..1663081 Rhodobacter sphaeroides ATCC 17029 4896240 YP_001043463.1 CDS Rsph17029_1581 NC_009049.1 1663188 1664108 R PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rba:RB7610 similar to DNA-dependent DNA polymerase beta chain YshC; phosphotransferase domain-containing protein complement(1663188..1664108) Rhodobacter sphaeroides ATCC 17029 4896321 YP_001043464.1 CDS Rsph17029_1582 NC_009049.1 1664239 1664931 D PFAM: protein of unknown function DUF1045; KEGG: rsp:RSP_2937 hypothetical protein; hypothetical protein 1664239..1664931 Rhodobacter sphaeroides ATCC 17029 4896388 YP_001043465.1 CDS Rsph17029_1583 NC_009049.1 1664936 1665364 R KEGG: rsp:RSP_6080 hypothetical protein; hypothetical protein complement(1664936..1665364) Rhodobacter sphaeroides ATCC 17029 4896535 YP_001043466.1 CDS Rsph17029_1584 NC_009049.1 1665720 1666355 R TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rsp:RSP_2939 predicted transcriptional regulator containing the HTH domain; putative transcriptional regulator complement(1665720..1666355) Rhodobacter sphaeroides ATCC 17029 4896531 YP_001043467.1 CDS Rsph17029_1585 NC_009049.1 1666352 1667146 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: rsp:RSP_2940 hypothetical protein; chromosome segregation and condensation protein ScpA complement(1666352..1667146) Rhodobacter sphaeroides ATCC 17029 4896682 YP_001043468.1 CDS Rsph17029_1586 NC_009049.1 1667133 1668146 R PFAM: glycoside hydrolase, family 3 domain protein; KEGG: rsp:RSP_2941 putative glycoside hydrolase; beta-N-acetylhexosaminidase complement(1667133..1668146) Rhodobacter sphaeroides ATCC 17029 4896856 YP_001043469.1 CDS Rsph17029_1587 NC_009049.1 1668143 1669129 R PFAM: Sporulation domain protein; KEGG: rsp:RSP_2942 hypothetical protein; sporulation domain-containing protein complement(1668143..1669129) Rhodobacter sphaeroides ATCC 17029 4896882 YP_001043470.1 CDS argS NC_009049.1 1669200 1670942 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(1669200..1670942) Rhodobacter sphaeroides ATCC 17029 4896977 YP_001043471.1 CDS Rsph17029_1589 NC_009049.1 1671018 1671503 R KEGG: rsp:RSP_6081 hypothetical protein; hypothetical protein complement(1671018..1671503) Rhodobacter sphaeroides ATCC 17029 4897032 YP_001043472.1 CDS Rsph17029_1590 NC_009049.1 1671494 1672105 R PFAM: protein of unknown function DUF847; KEGG: rsp:RSP_2944 hypothetical protein; hypothetical protein complement(1671494..1672105) Rhodobacter sphaeroides ATCC 17029 4897129 YP_001043473.1 CDS Rsph17029_1591 NC_009049.1 1672255 1672710 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(1672255..1672710) Rhodobacter sphaeroides ATCC 17029 4897370 YP_001043474.1 CDS argC NC_009049.1 1672733 1673761 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1672733..1673761) Rhodobacter sphaeroides ATCC 17029 4897458 YP_001043475.1 CDS Rsph17029_1593 NC_009049.1 1673786 1674598 R KEGG: rsp:RSP_2947 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase complement(1673786..1674598) Rhodobacter sphaeroides ATCC 17029 4898088 YP_001043476.1 CDS Rsph17029_1594 NC_009049.1 1674736 1678122 R Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase complement(1674736..1678122) Rhodobacter sphaeroides ATCC 17029 4896116 YP_001043477.1 CDS Rsph17029_1595 NC_009049.1 1678279 1679172 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2950 transcriptional regulator, LysR family; LysR family transcriptional regulator 1678279..1679172 Rhodobacter sphaeroides ATCC 17029 4896591 YP_001043478.1 CDS Rsph17029_1596 NC_009049.1 1679558 1681780 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1679558..1681780 Rhodobacter sphaeroides ATCC 17029 4897441 YP_001043479.1 CDS Rsph17029_1597 NC_009049.1 1682014 1682256 D PFAM: BolA family protein; KEGG: rsp:RSP_2952 BolA-like protein; BolA family protein 1682014..1682256 Rhodobacter sphaeroides ATCC 17029 4896855 YP_001043480.1 CDS Rsph17029_1598 NC_009049.1 1682316 1682681 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rsp:RSP_2953 glutaredoxin-related protein; glutaredoxin-like protein 1682316..1682681 Rhodobacter sphaeroides ATCC 17029 4896395 YP_001043481.1 CDS Rsph17029_1599 NC_009049.1 1682941 1683315 R PFAM: protein of unknown function DUF710; KEGG: rsp:RSP_2954 hypothetical protein; hypothetical protein complement(1682941..1683315) Rhodobacter sphaeroides ATCC 17029 4895982 YP_001043482.1 CDS Rsph17029_1600 NC_009049.1 1683308 1683775 R KEGG: rsp:RSP_2955 hypothetical protein; hypothetical protein complement(1683308..1683775) Rhodobacter sphaeroides ATCC 17029 4897529 YP_001043483.1 CDS Rsph17029_1601 NC_009049.1 1684033 1686051 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1684033..1686051 Rhodobacter sphaeroides ATCC 17029 4897181 YP_001043484.1 CDS Rsph17029_1602 NC_009049.1 1686123 1686416 R KEGG: rsp:RSP_2957 hypothetical protein; hypothetical protein complement(1686123..1686416) Rhodobacter sphaeroides ATCC 17029 4896238 YP_001043485.1 CDS Rsph17029_1603 NC_009049.1 1686448 1687419 R PFAM: protein of unknown function DUF808; KEGG: rsp:RSP_2958 hypothetical protein; hypothetical protein complement(1686448..1687419) Rhodobacter sphaeroides ATCC 17029 4897822 YP_001043486.1 CDS Rsph17029_1604 NC_009049.1 1687991 1688992 D KEGG: rsp:RSP_2959 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 1687991..1688992 Rhodobacter sphaeroides ATCC 17029 4895080 YP_001043487.1 CDS Rsph17029_1605 NC_009049.1 1689201 1689356 D KEGG: rsp:RSP_6082 hypothetical protein; hypothetical protein 1689201..1689356 Rhodobacter sphaeroides ATCC 17029 4895079 YP_001043488.1 CDS coaD NC_009049.1 1689383 1689871 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(1689383..1689871) Rhodobacter sphaeroides ATCC 17029 4895124 YP_001043489.1 CDS Rsph17029_1607 NC_009049.1 1689941 1690375 R PFAM: CBS domain containing protein; KEGG: rsp:RSP_2961 protein containing a CBS domain; signal-transduction protein complement(1689941..1690375) Rhodobacter sphaeroides ATCC 17029 4896810 YP_001043490.1 CDS Rsph17029_1608 NC_009049.1 1690430 1691323 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_2965 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1690430..1691323) Rhodobacter sphaeroides ATCC 17029 4896122 YP_001043491.1 CDS Rsph17029_1609 NC_009049.1 1691426 1692925 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_2962 methylmalonic acid semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1691426..1692925 Rhodobacter sphaeroides ATCC 17029 4897296 YP_001043492.1 CDS Rsph17029_1610 NC_009049.1 1693265 1693921 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: rsp:RSP_2963 transcriptional regulator, Crp-Fnr family; CRP/FNR family transcriptional regulator 1693265..1693921 Rhodobacter sphaeroides ATCC 17029 4896477 YP_001043493.1 CDS Rsph17029_1611 NC_009049.1 1694172 1694375 D KEGG: rsp:RSP_2964 hypothetical protein; hypothetical protein 1694172..1694375 Rhodobacter sphaeroides ATCC 17029 4895906 YP_001043494.1 CDS uvrA NC_009049.1 1694610 1697468 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(1694610..1697468) Rhodobacter sphaeroides ATCC 17029 4897209 YP_001043495.1 CDS Rsph17029_1613 NC_009049.1 1697585 1698751 R PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2967 probable transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter complement(1697585..1698751) Rhodobacter sphaeroides ATCC 17029 4897477 YP_001043496.1 CDS Rsph17029_1614 NC_009049.1 1698927 1700321 R E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(1698927..1700321) Rhodobacter sphaeroides ATCC 17029 4896198 YP_001043497.1 CDS Rsph17029_1615 NC_009049.1 1700410 1700985 R PFAM: protein of unknown function DUF924; KEGG: rsp:RSP_2969 hypothetical protein; hypothetical protein complement(1700410..1700985) Rhodobacter sphaeroides ATCC 17029 4897313 YP_001043498.1 CDS Rsph17029_1616 NC_009049.1 1701192 1702448 R PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_2970 transporter, major facilitator superfamily (MFS); major facilitator superfamily transporter complement(1701192..1702448) Rhodobacter sphaeroides ATCC 17029 4897169 YP_001043499.1 CDS queA NC_009049.1 1702528 1703568 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(1702528..1703568) Rhodobacter sphaeroides ATCC 17029 4897027 YP_001043500.1 CDS Rsph17029_1618 NC_009049.1 1703654 1706938 R KEGG: rsp:RSP_2972 hypothetical protein; hypothetical protein complement(1703654..1706938) Rhodobacter sphaeroides ATCC 17029 4895845 YP_001043501.1 CDS Rsph17029_1619 NC_009049.1 1707029 1707490 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_2973 peroxiredoxin; alkyl hydroperoxide reductase 1707029..1707490 Rhodobacter sphaeroides ATCC 17029 4897314 YP_001043502.1 CDS Rsph17029_1620 NC_009049.1 1707901 1709244 D PFAM: peptidase M23B; KEGG: rsp:RSP_2974 putative metalopeptidase; peptidase M23B 1707901..1709244 Rhodobacter sphaeroides ATCC 17029 4897835 YP_001043503.1 CDS Rsph17029_1621 NC_009049.1 1709234 1709752 D PFAM: protein of unknown function DUF583; KEGG: rsp:RSP_2975 hypothetical protein; hypothetical protein 1709234..1709752 Rhodobacter sphaeroides ATCC 17029 4897492 YP_001043504.1 CDS Rsph17029_1622 NC_009049.1 1709948 1710724 R KEGG: rsp:RSP_2976 hypothetical protein; hypothetical protein complement(1709948..1710724) Rhodobacter sphaeroides ATCC 17029 4895068 YP_001043505.1 CDS prfB NC_009049.1 1711097 1712224 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(1711097..1712224) Rhodobacter sphaeroides ATCC 17029 4895061 YP_001043506.1 CDS Rsph17029_1624 NC_009049.1 1712333 1714882 R KEGG: rsp:RSP_2978 penicillin-binding protein 1A (PBP-1a); TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein complement(1712333..1714882) Rhodobacter sphaeroides ATCC 17029 4895075 YP_001043507.1 CDS Rsph17029_1625 NC_009049.1 1714974 1716209 R PFAM: cell wall hydrolase/autolysin; KEGG: rsp:RSP_2979 probable N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(1714974..1716209) Rhodobacter sphaeroides ATCC 17029 4895105 YP_001043508.1 CDS Rsph17029_1626 NC_009049.1 1716258 1717409 R PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_2980 putative aspartate aminotransferase A; class I and II aminotransferase complement(1716258..1717409) Rhodobacter sphaeroides ATCC 17029 4897031 YP_001043509.1 CDS Rsph17029_1627 NC_009049.1 1717577 1718320 D PFAM: DSBA oxidoreductase; KEGG: rsp:RSP_2981 putative protein-disulfide isomerase; DSBA oxidoreductase 1717577..1718320 Rhodobacter sphaeroides ATCC 17029 4895110 YP_001043510.1 CDS ispG NC_009049.1 1718659 1719792 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1718659..1719792) Rhodobacter sphaeroides ATCC 17029 4895116 YP_001043511.1 CDS Rsph17029_1629 NC_009049.1 1719923 1721137 R KEGG: rsp:RSP_2983 hypothetical protein; hypothetical protein complement(1719923..1721137) Rhodobacter sphaeroides ATCC 17029 4896858 YP_001043512.1 CDS Rsph17029_1630 NC_009049.1 1721248 1722471 R catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase complement(1721248..1722471) Rhodobacter sphaeroides ATCC 17029 4895118 YP_001043513.1 CDS Rsph17029_1631 NC_009049.1 1722606 1723175 R KEGG: rsp:RSP_2985 hypothetical protein; hypothetical protein complement(1722606..1723175) Rhodobacter sphaeroides ATCC 17029 4895654 YP_001043514.1 CDS Rsph17029_1632 NC_009049.1 1723406 1724779 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rsp:RSP_2986 hypothetical protein; hypothetical protein 1723406..1724779 Rhodobacter sphaeroides ATCC 17029 4895139 YP_001043515.1 CDS Rsph17029_1633 NC_009049.1 1724776 1725219 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_2987 probable acetyltransferase; N-acetyltransferase GCN5 1724776..1725219 Rhodobacter sphaeroides ATCC 17029 4896475 YP_001043516.1 CDS Rsph17029_1634 NC_009049.1 1725697 1726629 R PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: rsp:RSP_2988 pirin-related protein; pirin domain-containing protein complement(1725697..1726629) Rhodobacter sphaeroides ATCC 17029 4897242 YP_001043517.1 CDS guaA NC_009049.1 1726804 1728360 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1726804..1728360 Rhodobacter sphaeroides ATCC 17029 4895146 YP_001043518.1 CDS Rsph17029_1636 NC_009049.1 1728828 1729715 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0006 possible transporter, DMT superfamily; hypothetical protein 1728828..1729715 Rhodobacter sphaeroides ATCC 17029 4895202 YP_001043519.1 CDS Rsph17029_1637 NC_009049.1 1729800 1730918 D PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: rsp:RSP_0007 putative outer membrane protein; aromatic hydrocarbon degradation membrane protein 1729800..1730918 Rhodobacter sphaeroides ATCC 17029 4895209 YP_001043520.1 CDS Rsph17029_1638 NC_009049.1 1730971 1731936 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0008 possible transporter, DME family, DMT superfamily; hypothetical protein 1730971..1731936 Rhodobacter sphaeroides ATCC 17029 4895246 YP_001043521.1 CDS Rsph17029_1639 NC_009049.1 1731969 1732838 D KEGG: rsp:RSP_0009 hypothetical protein; hypothetical protein 1731969..1732838 Rhodobacter sphaeroides ATCC 17029 4895276 YP_001043522.1 CDS Rsph17029_1640 NC_009049.1 1732869 1733786 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1732869..1733786 Rhodobacter sphaeroides ATCC 17029 4895302 YP_001043523.1 CDS Rsph17029_1641 NC_009049.1 1733776 1734729 D PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0011 predicted hydrolase or acyltransferase (alpha/beta hydrolase); alpha/beta hydrolase 1733776..1734729 Rhodobacter sphaeroides ATCC 17029 4895291 YP_001043524.1 CDS Rsph17029_1642 NC_009049.1 1734770 1735654 D PFAM: protein of unknown function DUF344; KEGG: rsp:RSP_0013 hypothetical protein; hypothetical protein 1734770..1735654 Rhodobacter sphaeroides ATCC 17029 4895322 YP_001043525.1 CDS Rsph17029_1643 NC_009049.1 1735651 1736268 D PFAM: regulatory protein, TetR; KEGG: rsp:RSP_0014 transcriptional regulator, TetR family; TetR family transcriptional regulator 1735651..1736268 Rhodobacter sphaeroides ATCC 17029 4895342 YP_001043526.1 CDS Rsph17029_1644 NC_009049.1 1736421 1737494 R KEGG: rsp:RSP_0015 ABC spermidine/putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(1736421..1737494) Rhodobacter sphaeroides ATCC 17029 4895340 YP_001043527.1 CDS Rsph17029_1645 NC_009049.1 1737515 1738321 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0016 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1737515..1738321) Rhodobacter sphaeroides ATCC 17029 4895380 YP_001043528.1 CDS Rsph17029_1646 NC_009049.1 1738318 1739205 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0017 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1738318..1739205) Rhodobacter sphaeroides ATCC 17029 4895410 YP_001043529.1 CDS Rsph17029_1647 NC_009049.1 1739633 1741036 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_0018 putative transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1739633..1741036) Rhodobacter sphaeroides ATCC 17029 4895409 YP_001043530.1 CDS Rsph17029_1648 NC_009049.1 1741121 1741348 D KEGG: rsp:RSP_0019 hypothetical protein; hypothetical protein 1741121..1741348 Rhodobacter sphaeroides ATCC 17029 4895496 YP_001043531.1 CDS Rsph17029_1649 NC_009049.1 1741440 1742147 R PFAM: protein of unknown function DUF1003; KEGG: rsp:RSP_0020 hypothetical protein; hypothetical protein complement(1741440..1742147) Rhodobacter sphaeroides ATCC 17029 4895501 YP_001043532.1 CDS rpsI NC_009049.1 1742488 1742970 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(1742488..1742970) Rhodobacter sphaeroides ATCC 17029 4895480 YP_001043533.1 CDS rplM NC_009049.1 1742974 1743438 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(1742974..1743438) Rhodobacter sphaeroides ATCC 17029 4895545 YP_001043534.1 CDS Rsph17029_1652 NC_009049.1 1743643 1744434 R KEGG: rsp:RSP_6083 hypothetical protein; hypothetical protein complement(1743643..1744434) Rhodobacter sphaeroides ATCC 17029 4895551 YP_001043535.1 CDS Rsph17029_1653 NC_009049.1 1745010 1745543 D KEGG: rsp:RSP_0024 putative dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-L-rhamnose synthetase); TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1745010..1745543 Rhodobacter sphaeroides ATCC 17029 4895633 YP_001043536.1 CDS Rsph17029_1654 NC_009049.1 1745867 1747216 R PFAM: oxidoreductase domain protein; SAF domain; KEGG: rsp:RSP_0025 probable NAD(P)-dependent oxidoreductase; SAF domain-containing protein complement(1745867..1747216) Rhodobacter sphaeroides ATCC 17029 4895631 YP_001043537.1 CDS Rsph17029_1655 NC_009049.1 1747213 1748268 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: rsp:RSP_0026 probable epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1747213..1748268) Rhodobacter sphaeroides ATCC 17029 4895555 YP_001043538.1 CDS Rsph17029_1656 NC_009049.1 1748466 1749257 R KEGG: rsp:RSP_0027 hypothetical protein; hypothetical protein complement(1748466..1749257) Rhodobacter sphaeroides ATCC 17029 4895688 YP_001043539.1 CDS Rsph17029_1657 NC_009049.1 1749485 1750483 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0028 short chain dehydrogenase; short chain dehydrogenase 1749485..1750483 Rhodobacter sphaeroides ATCC 17029 4895767 YP_001043540.1 CDS Rsph17029_1658 NC_009049.1 1750645 1752144 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: rsp:RSP_0029 acetyl-CoA hydrolase/transferase family protein; Acetyl-CoA hydrolase 1750645..1752144 Rhodobacter sphaeroides ATCC 17029 4895665 YP_001043541.1 CDS Rsph17029_1659 NC_009049.1 1752417 1754918 R KEGG: rsp:RSP_0030 PAS sensor diguanylatecyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase complement(1752417..1754918) Rhodobacter sphaeroides ATCC 17029 4895787 YP_001043542.1 CDS Rsph17029_1660 NC_009049.1 1754965 1755138 R KEGG: rsp:RSP_6084 hypothetical protein; hypothetical protein complement(1754965..1755138) Rhodobacter sphaeroides ATCC 17029 4895768 YP_001043543.1 CDS Rsph17029_1661 NC_009049.1 1755391 1756209 D KEGG: rsp:RSP_6085 hypothetical protein; hypothetical protein 1755391..1756209 Rhodobacter sphaeroides ATCC 17029 4895824 YP_001043544.1 CDS Rsph17029_1662 NC_009049.1 1756345 1757064 R TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_0032 sigma factor FliA (sigma-28 group, flagellar); FliA/WhiG family RNA polymerase sigma factor complement(1756345..1757064) Rhodobacter sphaeroides ATCC 17029 4895821 YP_001043545.1 CDS Rsph17029_1663 NC_009049.1 1757061 1758074 R KEGG: rsp:RSP_0033 hypothetical protein; hypothetical protein complement(1757061..1758074) Rhodobacter sphaeroides ATCC 17029 4895826 YP_001043546.1 CDS Rsph17029_1664 NC_009049.1 1758078 1760192 R TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rsp:RSP_0034 flagellar biosynthesis protein, FlhA; flagellar biosynthesis protein FlhA complement(1758078..1760192) Rhodobacter sphaeroides ATCC 17029 4895801 YP_001043547.1 CDS Rsph17029_1665 NC_009049.1 1760380 1760913 D PFAM: protein of unknown function DUF400; KEGG: rsp:RSP_0035 hypothetical protein; hypothetical protein 1760380..1760913 Rhodobacter sphaeroides ATCC 17029 4895862 YP_001043548.1 CDS Rsph17029_1666 NC_009049.1 1760910 1761992 D KEGG: rsp:RSP_6086 hypothetical protein; hypothetical protein 1760910..1761992 Rhodobacter sphaeroides ATCC 17029 4895880 YP_001043549.1 CDS Rsph17029_1667 NC_009049.1 1761995 1762657 D PFAM: SAF domain; KEGG: rsp:RSP_0036 flagellar basal-body P-ring formation protein FlgA; SAF domain-containing protein 1761995..1762657 Rhodobacter sphaeroides ATCC 17029 4895998 YP_001043550.1 CDS Rsph17029_1668 NC_009049.1 1762694 1762993 D KEGG: rsp:RSP_0037 putative FlgM, negative regulator of flagellin synthesis; putative anti-sigma-28 factor, FlgM 1762694..1762993 Rhodobacter sphaeroides ATCC 17029 4896045 YP_001043551.1 CDS Rsph17029_1669 NC_009049.1 1763022 1763393 D KEGG: rsp:RSP_6087 hypothetical protein; hypothetical protein 1763022..1763393 Rhodobacter sphaeroides ATCC 17029 4896043 YP_001043552.1 CDS Rsph17029_1670 NC_009049.1 1763412 1764044 R PFAM: Sel1 domain protein repeat-containing protein; KEGG: rsp:RSP_6088 hypothetical protein (Sel1-like repeat); Sel1 domain-containing protein complement(1763412..1764044) Rhodobacter sphaeroides ATCC 17029 4896080 YP_001043553.1 CDS Rsph17029_1671 NC_009049.1 1764041 1764436 R KEGG: rsp:RSP_6089 hypothetical protein; hypothetical protein complement(1764041..1764436) Rhodobacter sphaeroides ATCC 17029 4896078 YP_001043554.1 CDS Rsph17029_1672 NC_009049.1 1764603 1765088 D KEGG: rsp:RSP_6090 hypothetical protein; hypothetical protein 1764603..1765088 Rhodobacter sphaeroides ATCC 17029 4896152 YP_001043555.1 CDS Rsph17029_1673 NC_009049.1 1765142 1765330 D KEGG: rsp:RSP_0038 hypothetical protein; hypothetical protein 1765142..1765330 Rhodobacter sphaeroides ATCC 17029 4896220 YP_001043556.1 CDS Rsph17029_1674 NC_009049.1 1765658 1765975 R KEGG: rsp:RSP_0039 hypothetical protein; hypothetical protein complement(1765658..1765975) Rhodobacter sphaeroides ATCC 17029 4896129 YP_001043557.1 CDS Rsph17029_1675 NC_009049.1 1765972 1766352 R KEGG: rsp:RSP_0040 putative flagellar protein FliS; putative flagellar protein FliS complement(1765972..1766352) Rhodobacter sphaeroides ATCC 17029 4896285 YP_001043558.1 CDS Rsph17029_1676 NC_009049.1 1766636 1767217 R KEGG: rsp:RSP_0041 hypothetical protein; hypothetical protein complement(1766636..1767217) Rhodobacter sphaeroides ATCC 17029 4896296 YP_001043559.1 CDS Rsph17029_1677 NC_009049.1 1767354 1770641 R PFAM: CheW domain protein; Hpt domain protein; KEGG: rsp:RSP_0042 chemotaxis histidine protein kinase, CheA3; putative CheA signal transduction histidine kinases complement(1767354..1770641) Rhodobacter sphaeroides ATCC 17029 4896366 YP_001043560.1 CDS Rsph17029_1678 NC_009049.1 1770667 1771071 R PFAM: response regulator receiver; KEGG: rsp:RSP_0043 chemotaxis response regulator, CheY6; response regulator receiver protein complement(1770667..1771071) Rhodobacter sphaeroides ATCC 17029 4896364 YP_001043561.1 CDS Rsph17029_1679 NC_009049.1 1771275 1772978 R PFAM: chemotaxis sensory transducer; SMART: histidine kinase, HAMP region domain protein; KEGG: rsp:RSP_0044 putative cytoplasmic chemoreceptor, TlpT; methyl-accepting chemotaxis sensory transducer complement(1771275..1772978) Rhodobacter sphaeroides ATCC 17029 4896438 YP_001043562.1 CDS Rsph17029_1680 NC_009049.1 1772975 1773700 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_0045 Slp; cobyrinic acid a,c-diamide synthase complement(1772975..1773700) Rhodobacter sphaeroides ATCC 17029 4896441 YP_001043563.1 CDS Rsph17029_1681 NC_009049.1 1773704 1774213 R PFAM: CheW domain protein; KEGG: rsp:RSP_0046 chemotaxis protein, CheW4; putative CheW protein complement(1773704..1774213) Rhodobacter sphaeroides ATCC 17029 4896500 YP_001043564.1 CDS Rsph17029_1682 NC_009049.1 1774232 1775329 R PFAM: CheB methylesterase; response regulator receiver; KEGG: rsp:RSP_0047 chemotaxis methylesterase, CheB2; response regulator receiver modulated CheB methylesterase complement(1774232..1775329) Rhodobacter sphaeroides ATCC 17029 4896440 YP_001043565.1 CDS Rsph17029_1683 NC_009049.1 1775329 1776138 R PFAM: MCP methyltransferase, CheR-type; KEGG: rsp:RSP_0048 MCP methyltransferase, CheR3; protein-glutamate O-methyltransferase complement(1775329..1776138) Rhodobacter sphaeroides ATCC 17029 4896581 YP_001043566.1 CDS Rsph17029_1684 NC_009049.1 1776135 1777334 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; KEGG: rsp:RSP_0049 chemotaxis histidine protein kinase, CheA4; putative CheA signal transduction histidine kinases complement(1776135..1777334) Rhodobacter sphaeroides ATCC 17029 4896587 YP_001043567.1 CDS Rsph17029_1685 NC_009049.1 1777479 1777784 R KEGG: rsp:RSP_6091 hypothetical protein; hypothetical protein complement(1777479..1777784) Rhodobacter sphaeroides ATCC 17029 4896572 YP_001043568.1 CDS Rsph17029_1686 NC_009049.1 1778210 1779346 D PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; KEGG: rsp:RSP_0051 TorF protein; sigma-54 factor interaction domain-containing protein 1778210..1779346 Rhodobacter sphaeroides ATCC 17029 4896602 YP_001043569.1 CDS Rsph17029_1687 NC_009049.1 1779360 1779683 D TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: rsp:RSP_0052 flagellar protein FliE; flagellar hook-basal body complex subunit FliE 1779360..1779683 Rhodobacter sphaeroides ATCC 17029 4896634 YP_001043570.1 CDS Rsph17029_1688 NC_009049.1 1779703 1781415 D TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; KEGG: rsp:RSP_0053 flagellar FliF M-ring protein; flagellar M-ring protein FliF 1779703..1781415 Rhodobacter sphaeroides ATCC 17029 4896623 YP_001043571.1 CDS Rsph17029_1689 NC_009049.1 1781417 1782439 D PFAM: flagellar motor switch protein FliG; KEGG: rsp:RSP_0054 probable flagellar motor switch protein FliG; flagellar motor switch protein FliG 1781417..1782439 Rhodobacter sphaeroides ATCC 17029 4896723 YP_001043572.1 CDS Rsph17029_1690 NC_009049.1 1782443 1783258 D KEGG: rsp:RSP_0055 flagellar protein FliH; hypothetical protein 1782443..1783258 Rhodobacter sphaeroides ATCC 17029 4896728 YP_001043573.1 CDS Rsph17029_1691 NC_009049.1 1783255 1784583 D KEGG: rsp:RSP_0056 FliI, flagellum-specific ATPase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; FliI/YscN family ATPase 1783255..1784583 Rhodobacter sphaeroides ATCC 17029 4896699 YP_001043574.1 CDS Rsph17029_1692 NC_009049.1 1784585 1784992 D KEGG: rsp:RSP_0057 flagellar protein FliJ; hypothetical protein 1784585..1784992 Rhodobacter sphaeroides ATCC 17029 4896780 YP_001043575.1 CDS Rsph17029_1693 NC_009049.1 1785047 1787158 D PFAM: flagellar hook-length control protein; KEGG: rsp:RSP_0058 FliK, flagellar hook-length control protein; flagellar hook-length control protein 1785047..1787158 Rhodobacter sphaeroides ATCC 17029 4896829 YP_001043576.1 CDS Rsph17029_1694 NC_009049.1 1787151 1787741 D PFAM: flagellar basal body-associated protein FliL; KEGG: rsp:RSP_0059 flagellar biosynthesis protein, FliL; flagellar basal body-associated protein FliL 1787151..1787741 Rhodobacter sphaeroides ATCC 17029 4896813 YP_001043577.1 CDS Rsph17029_1695 NC_009049.1 1787745 1788716 D PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rsp:RSP_0060 flagellar switch protein FliM; surface presentation of antigens (SPOA) protein 1787745..1788716 Rhodobacter sphaeroides ATCC 17029 4896763 YP_001043578.1 CDS Rsph17029_1696 NC_009049.1 1788873 1789169 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_0061 flagellar motor switch FliN protein; flagellar motor switch protein FliN 1788873..1789169 Rhodobacter sphaeroides ATCC 17029 4896832 YP_001043579.1 CDS Rsph17029_1697 NC_009049.1 1789302 1789559 D KEGG: rsp:RSP_0062 flagellar protein FliO; flagellar protein FliO 1789302..1789559 Rhodobacter sphaeroides ATCC 17029 4896880 YP_001043580.1 CDS fliP NC_009049.1 1789556 1790461 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1789556..1790461 Rhodobacter sphaeroides ATCC 17029 4896928 YP_001043581.1 CDS Rsph17029_1699 NC_009049.1 1790461 1790727 D TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: rsp:RSP_0064 flagellar protein FliQ; flagellar biosynthetic protein FliQ 1790461..1790727 Rhodobacter sphaeroides ATCC 17029 4896962 YP_001043582.1 CDS Rsph17029_1700 NC_009049.1 1790727 1791536 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rsp:RSP_0065 flagellar protein FliR; flagellar biosynthetic protein FliR 1790727..1791536 Rhodobacter sphaeroides ATCC 17029 4896966 YP_001043583.1 CDS Rsph17029_1701 NC_009049.1 1791523 1792665 D TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rsp:RSP_0066 flagellar protein FlhB; flagellar biosynthetic protein FlhB 1791523..1792665 Rhodobacter sphaeroides ATCC 17029 4896981 YP_001043584.1 CDS Rsph17029_1702 NC_009049.1 1792674 1793438 D KEGG: rsp:RSP_0067 hypothetical protein; hypothetical protein 1792674..1793438 Rhodobacter sphaeroides ATCC 17029 4897147 YP_001043585.1 CDS Rsph17029_1703 NC_009049.1 1793446 1794114 D KEGG: rsp:RSP_6092 hypothetical protein; hypothetical protein 1793446..1794114 Rhodobacter sphaeroides ATCC 17029 4897226 YP_001043586.1 CDS Rsph17029_1704 NC_009049.1 1794121 1795437 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_0068 sigma-54 factor (RpoN2); RNA polymerase sigma 54 subunit RpoN complement(1794121..1795437) Rhodobacter sphaeroides ATCC 17029 4897364 YP_001043587.1 CDS Rsph17029_1705 NC_009049.1 1795631 1797112 R PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: rsp:RSP_0069 flagellar filament protein; flagellin domain-containing protein complement(1795631..1797112) Rhodobacter sphaeroides ATCC 17029 4897383 YP_001043588.1 CDS Rsph17029_1706 NC_009049.1 1797352 1799007 D PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: rsp:RSP_0070 possible flagellar hook-associated protein 2 (filament cap protein); flagellar hook-associated 2 domain-containing protein 1797352..1799007 Rhodobacter sphaeroides ATCC 17029 4897440 YP_001043589.1 CDS Rsph17029_1707 NC_009049.1 1799038 1800138 R PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rsp:RSP_0071 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator complement(1799038..1800138) Rhodobacter sphaeroides ATCC 17029 4897604 YP_001043590.1 CDS Rsph17029_1708 NC_009049.1 1800292 1801089 R PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_0072 possible invasion protein; lytic transglycosylase, catalytic complement(1800292..1801089) Rhodobacter sphaeroides ATCC 17029 4897627 YP_001043591.1 CDS Rsph17029_1709 NC_009049.1 1801096 1802325 R TIGRFAM: flagellar hook-associated protein 3; KEGG: rsp:RSP_0073 flagellar hook-associated protein 3 FlgL; flagellar hook-associated protein 3 complement(1801096..1802325) Rhodobacter sphaeroides ATCC 17029 4897602 YP_001043592.1 CDS Rsph17029_1710 NC_009049.1 1802333 1806424 R TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; flagellin hook IN repeat protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0074 FlgK flagellar hook-associated protein 1; flagellar hook-associated protein FlgK complement(1802333..1806424) Rhodobacter sphaeroides ATCC 17029 4897628 YP_001043593.1 CDS Rsph17029_1711 NC_009049.1 1806532 1806834 R KEGG: rsp:RSP_6093 flagellar protein FlgJ; flagellar protein FlgJ complement(1806532..1806834) Rhodobacter sphaeroides ATCC 17029 4897756 YP_001043594.1 CDS flgI NC_009049.1 1806834 1807949 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(1806834..1807949) Rhodobacter sphaeroides ATCC 17029 4897755 YP_001043595.1 CDS Rsph17029_1713 NC_009049.1 1807946 1808614 R PFAM: flagellar L-ring protein; KEGG: rsp:RSP_0077 flagellar L-ring protein; flagellar L-ring protein complement(1807946..1808614) Rhodobacter sphaeroides ATCC 17029 4897778 YP_001043596.1 CDS Rsph17029_1714 NC_009049.1 1808622 1809410 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0078 flagellar distal rod protein; flagellar basal-body rod protein FlgG complement(1808622..1809410) Rhodobacter sphaeroides ATCC 17029 4897776 YP_001043597.1 CDS Rsph17029_1715 NC_009049.1 1809463 1810218 R PFAM: protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_0079 flagellar proximal rod protein FlgF; hypothetical protein complement(1809463..1810218) Rhodobacter sphaeroides ATCC 17029 4897763 YP_001043598.1 CDS Rsph17029_1716 NC_009049.1 1810227 1811498 R PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rsp:RSP_0080 flagellar hook protein FlgE; flagellar basal body FlaE domain-containing protein complement(1810227..1811498) Rhodobacter sphaeroides ATCC 17029 4897818 YP_001043599.1 CDS Rsph17029_1717 NC_009049.1 1811523 1812194 R PFAM: flagellar hook capping protein; KEGG: rsp:RSP_0081 flagellar scaffolding protein FlgD; flagellar hook capping protein complement(1811523..1812194) Rhodobacter sphaeroides ATCC 17029 4897809 YP_001043600.1 CDS Rsph17029_1718 NC_009049.1 1812196 1812612 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; KEGG: rsp:RSP_0082 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(1812196..1812612) Rhodobacter sphaeroides ATCC 17029 4897760 YP_001043601.1 CDS Rsph17029_1719 NC_009049.1 1812612 1812998 R TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: rsp:RSP_0083 flagellar proximal rod protein FlgB; flagellar basal-body rod protein FlgB complement(1812612..1812998) Rhodobacter sphaeroides ATCC 17029 4897829 YP_001043602.1 CDS Rsph17029_1720 NC_009049.1 1813088 1814245 D KEGG: rsp:RSP_0084 hypothetical protein; hypothetical protein 1813088..1814245 Rhodobacter sphaeroides ATCC 17029 4897825 YP_001043603.1 CDS Rsph17029_1721 NC_009049.1 1814526 1817135 R KEGG: rsp:RSP_0085 multisensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(1814526..1817135) Rhodobacter sphaeroides ATCC 17029 4897823 YP_001043604.1 CDS Rsph17029_1722 NC_009049.1 1817189 1817716 R KEGG: rsp:RSP_0086 hypothetical protein; hypothetical protein complement(1817189..1817716) Rhodobacter sphaeroides ATCC 17029 4897895 YP_001043605.1 CDS Rsph17029_1723 NC_009049.1 1817911 1818633 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_0087 two component transcriptional regulator, LuxR; two component LuxR family transcriptional regulator 1817911..1818633 Rhodobacter sphaeroides ATCC 17029 4897888 YP_001043606.1 CDS Rsph17029_1724 NC_009049.1 1818829 1819329 R PFAM: protein of unknown function DUF892; KEGG: rsp:RSP_0088 YcfI, putative structural proteins; hypothetical protein complement(1818829..1819329) Rhodobacter sphaeroides ATCC 17029 4897875 YP_001043607.1 CDS Rsph17029_1725 NC_009049.1 1819498 1820184 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0089 hypothetical protein; HAD family hydrolase 1819498..1820184 Rhodobacter sphaeroides ATCC 17029 4897957 YP_001043608.1 CDS Rsph17029_1726 NC_009049.1 1820181 1821134 D PFAM: putative sugar-binding domain protein; KEGG: rsp:RSP_0090 operon regulator SmoC; DeoR family transcriptional regulator 1820181..1821134 Rhodobacter sphaeroides ATCC 17029 4897952 YP_001043609.1 CDS Rsph17029_1727 NC_009049.1 1821242 1822552 D PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_0091 ABC sorbitol/mannitol transporter, periplasmic binding protein; extracellular solute-binding protein 1821242..1822552 Rhodobacter sphaeroides ATCC 17029 4898068 YP_001043610.1 CDS Rsph17029_1728 NC_009049.1 1822654 1823526 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0092 ABC sorbitol/mannitol transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1822654..1823526 Rhodobacter sphaeroides ATCC 17029 4897655 YP_001043611.1 CDS Rsph17029_1729 NC_009049.1 1823528 1824358 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0093 ABC sorbitol/mannitol transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1823528..1824358 Rhodobacter sphaeroides ATCC 17029 4896549 YP_001043612.1 CDS Rsph17029_1730 NC_009049.1 1824366 1825364 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0094 ABC sorbitol/mannitol transporter, ATPase subunit; ABC transporter 1824366..1825364 Rhodobacter sphaeroides ATCC 17029 4896316 YP_001043613.1 CDS Rsph17029_1731 NC_009049.1 1825366 1826136 D Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 1825366..1826136 Rhodobacter sphaeroides ATCC 17029 4897512 YP_001043614.1 CDS Rsph17029_1732 NC_009049.1 1826192 1827625 D PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: rsp:RSP_0096 mannitol dehydrogenase; mannitol dehydrogenase domain-containing protein 1826192..1827625 Rhodobacter sphaeroides ATCC 17029 4897676 YP_001043615.1 CDS Rsph17029_1733 NC_009049.1 1828141 1829238 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0097 TRAP-T family sorbitol/mannitol transporter, periplasmic binding protein, SmoM; TRAP dicarboxylate transporter- DctP subunit 1828141..1829238 Rhodobacter sphaeroides ATCC 17029 4897225 YP_001043616.1 CDS Rsph17029_1734 NC_009049.1 1829389 1831437 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_6094 TRAP-T family sorbitol/mannitol transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM complement(1829389..1831437) Rhodobacter sphaeroides ATCC 17029 4896403 YP_001043617.1 CDS Rsph17029_1735 NC_009049.1 1831434 1832048 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0099 TRAP-T family sorbitol/mannitol transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ complement(1831434..1832048) Rhodobacter sphaeroides ATCC 17029 4897535 YP_001043618.1 CDS Rsph17029_1736 NC_009049.1 1832437 1832823 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: rsp:RSP_0100 putative NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 1832437..1832823 Rhodobacter sphaeroides ATCC 17029 4896566 YP_001043619.1 CDS Rsph17029_1737 NC_009049.1 1832820 1833437 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1832820..1833437 Rhodobacter sphaeroides ATCC 17029 4896525 YP_001043620.1 CDS Rsph17029_1738 NC_009049.1 1833434 1835176 D NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1833434..1835176 Rhodobacter sphaeroides ATCC 17029 4897132 YP_001043621.1 CDS Rsph17029_1739 NC_009049.1 1835173 1835646 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1835173..1835646 Rhodobacter sphaeroides ATCC 17029 4896916 YP_001043622.1 CDS Rsph17029_1740 NC_009049.1 1835643 1836893 D PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_0104 respiratory-chain NADH dehydrogenase, 51 kDa subunit; NADH dehydrogenase (quinone) 1835643..1836893 Rhodobacter sphaeroides ATCC 17029 4897599 YP_001043623.1 CDS Rsph17029_1741 NC_009049.1 1836890 1839472 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1836890..1839472 Rhodobacter sphaeroides ATCC 17029 4895776 YP_001043624.1 CDS Rsph17029_1742 NC_009049.1 1839669 1840625 D PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: rsp:RSP_0106 putative NADH dehydrogenase I chain H; respiratory-chain NADH dehydrogenase subunit 1 1839669..1840625 Rhodobacter sphaeroides ATCC 17029 4896647 YP_001043625.1 CDS Rsph17029_1743 NC_009049.1 1840622 1841116 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1840622..1841116 Rhodobacter sphaeroides ATCC 17029 4897273 YP_001043626.1 CDS Rsph17029_1744 NC_009049.1 1841113 1841607 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: rsp:RSP_0108 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 1841113..1841607 Rhodobacter sphaeroides ATCC 17029 4896166 YP_001043627.1 CDS Rsph17029_1745 NC_009049.1 1841604 1841912 D PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rsp:RSP_0109 putative NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase, chain 4L 1841604..1841912 Rhodobacter sphaeroides ATCC 17029 4897120 YP_001043628.1 CDS Rsph17029_1746 NC_009049.1 1841914 1844016 D KEGG: rsp:RSP_0110 NADH-ubiquinone oxidoreductase, chain 5; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 1841914..1844016 Rhodobacter sphaeroides ATCC 17029 4897568 YP_001043629.1 CDS Rsph17029_1747 NC_009049.1 1843995 1845455 D KEGG: rpb:RPB_1358 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1843995..1845455 Rhodobacter sphaeroides ATCC 17029 4897555 YP_001043630.1 CDS Rsph17029_1748 NC_009049.1 1845455 1846798 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rsp:RSP_0112 NADH-ubiquinone oxidoreductase, chain 4; NADH dehydrogenase (quinone) 1845455..1846798 Rhodobacter sphaeroides ATCC 17029 4897554 YP_001043631.1 CDS Rsph17029_1749 NC_009049.1 1846876 1848327 D PFAM: phospholipase D/Transphosphatidylase; KEGG: rsp:RSP_0113 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 1846876..1848327 Rhodobacter sphaeroides ATCC 17029 4897059 YP_001043632.1 CDS Rsph17029_1750 NC_009049.1 1848324 1848668 D KEGG: rsp:RSP_0114 hypothetical protein; hypothetical protein 1848324..1848668 Rhodobacter sphaeroides ATCC 17029 4895703 YP_001043633.1 CDS Rsph17029_1751 NC_009049.1 1848690 1849934 R PFAM: cytochrome c, class I; KEGG: rsp:RSP_0115 class I triheme cytochrome c; cytochrome c, class I complement(1848690..1849934) Rhodobacter sphaeroides ATCC 17029 4895549 YP_001043634.1 CDS Rsph17029_1752 NC_009049.1 1849960 1850367 R KEGG: rsp:RSP_0116 hypothetical protein; hypothetical protein complement(1849960..1850367) Rhodobacter sphaeroides ATCC 17029 4896861 YP_001043635.1 CDS Rsph17029_1753 NC_009049.1 1850378 1852951 R PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_0117 cytochrome c oxidase, subunit I; cytochrome-c oxidase complement(1850378..1852951) Rhodobacter sphaeroides ATCC 17029 4896449 YP_001043636.1 CDS Rsph17029_1754 NC_009049.1 1852948 1853922 R TIGRFAM: cytochrome c, monohaem; PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: rsp:RSP_0118 cytochrome c oxidase, subunit IIc; cytochrome c, monoheme complement(1852948..1853922) Rhodobacter sphaeroides ATCC 17029 4896495 YP_001043637.1 CDS Rsph17029_1755 NC_009049.1 1854244 1855014 R PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_0119 PA-phosphatase related phosphoesterase; PA-phosphatase-like phosphoesterase complement(1854244..1855014) Rhodobacter sphaeroides ATCC 17029 4896735 YP_001043638.1 CDS Rsph17029_1756 NC_009049.1 1855267 1855749 R PFAM: Autoinducer-binding domain protein; KEGG: rsp:RSP_6095 possible transcriptional activator; autoinducer-binding domain-containing protein complement(1855267..1855749) Rhodobacter sphaeroides ATCC 17029 4896410 YP_001043639.1 CDS Rsph17029_1757 NC_009049.1 1855797 1856456 D PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rsp:RSP_6096 transcriptional regulator, LuxR family; response regulator receiver protein 1855797..1856456 Rhodobacter sphaeroides ATCC 17029 4897117 YP_001043640.1 CDS Rsph17029_1758 NC_009049.1 1856567 1857268 D PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator, HTH domain protein; KEGG: rsp:RSP_0122 transcriptional regulator, LuxR family; autoinducer-binding domain-containing protein 1856567..1857268 Rhodobacter sphaeroides ATCC 17029 4896830 YP_001043641.1 CDS Rsph17029_1759 NC_009049.1 1857290 1857448 D KEGG: rsp:RSP_6213 community escape response protein; community escape response protein 1857290..1857448 Rhodobacter sphaeroides ATCC 17029 4896148 YP_001043642.1 CDS Rsph17029_1760 NC_009049.1 1857445 1858077 D PFAM: autoinducer synthesis protein; KEGG: rsp:RSP_0123 autoinducer synthesis protein; autoinducer synthesis protein 1857445..1858077 Rhodobacter sphaeroides ATCC 17029 4896993 YP_001043643.1 CDS Rsph17029_1761 NC_009049.1 1858185 1858457 D KEGG: rsp:RSP_0124 hypothetical protein; hypothetical protein 1858185..1858457 Rhodobacter sphaeroides ATCC 17029 4896494 YP_001043644.1 CDS mdoG NC_009049.1 1858778 1860400 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1858778..1860400 Rhodobacter sphaeroides ATCC 17029 4895714 YP_001043645.1 CDS Rsph17029_1763 NC_009049.1 1860400 1860600 D KEGG: rsp:RSP_0126 hypothetical protein; hypothetical protein 1860400..1860600 Rhodobacter sphaeroides ATCC 17029 4895504 YP_001043646.1 CDS Rsph17029_1764 NC_009049.1 1860604 1862391 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1860604..1862391 Rhodobacter sphaeroides ATCC 17029 4896422 YP_001043647.1 CDS Rsph17029_1765 NC_009049.1 1862384 1863583 D KEGG: rsp:RSP_0128 OpgC protein; OpgC protein 1862384..1863583 Rhodobacter sphaeroides ATCC 17029 4897853 YP_001043648.1 CDS Rsph17029_1766 NC_009049.1 1864108 1865169 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0129 ABC D-methionine uptake transporter, ATPase subunit; ABC transporter 1864108..1865169 Rhodobacter sphaeroides ATCC 17029 4897325 YP_001043649.1 CDS Rsph17029_1767 NC_009049.1 1865159 1865833 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0130 ABC D-methionine uptake transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1865159..1865833 Rhodobacter sphaeroides ATCC 17029 4897022 YP_001043650.1 CDS Rsph17029_1768 NC_009049.1 1865862 1866638 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rsp:RSP_0132 ABC D-methionine uptake transporter, substrate-binding protein; YaeC family lipoprotein 1865862..1866638 Rhodobacter sphaeroides ATCC 17029 4896467 YP_001043651.1 CDS Rsph17029_1769 NC_009049.1 1866874 1868364 D PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: rsp:RSP_0133 Na+/H+ antiporter, NhaC family; Na+/H+ antiporter NhaC 1866874..1868364 Rhodobacter sphaeroides ATCC 17029 4895167 YP_001043652.1 CDS Rsph17029_1770 NC_009049.1 1868417 1868695 R hypothetical protein complement(1868417..1868695) Rhodobacter sphaeroides ATCC 17029 4895326 YP_001043653.1 CDS rpsF NC_009049.1 1870099 1870506 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1870099..1870506 Rhodobacter sphaeroides ATCC 17029 4895920 YP_001043654.1 CDS rpsR NC_009049.1 1870527 1870754 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1870527..1870754 Rhodobacter sphaeroides ATCC 17029 4896557 YP_001043655.1 CDS rplI NC_009049.1 1870767 1871336 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1870767..1871336 Rhodobacter sphaeroides ATCC 17029 4895932 YP_001043656.1 CDS tig NC_009049.1 1871659 1872993 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1871659..1872993) Rhodobacter sphaeroides ATCC 17029 4896488 YP_001043657.1 CDS Rsph17029_1776 NC_009049.1 1873301 1873771 D KEGG: rsp:RSP_6097 hypothetical protein; hypothetical protein 1873301..1873771 Rhodobacter sphaeroides ATCC 17029 4896805 YP_001043658.1 CDS Rsph17029_1779 NC_009049.1 1875541 1875879 D PFAM: nitrogen regulatory protein P-II; KEGG: rsp:RSP_0146 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1875541..1875879 Rhodobacter sphaeroides ATCC 17029 4896875 YP_001043659.1 CDS Rsph17029_1780 NC_009049.1 1875961 1877370 D KEGG: rsp:RSP_0147 glutamine synthetase class-I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 1875961..1877370 Rhodobacter sphaeroides ATCC 17029 4897236 YP_001043660.1 CDS Rsph17029_1781 NC_009049.1 1877563 1878615 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_0148 signal transduction histidine kinase; signal transduction histidine kinase complement(1877563..1878615) Rhodobacter sphaeroides ATCC 17029 4897267 YP_001043661.1 CDS Rsph17029_1782 NC_009049.1 1878612 1879049 R PFAM: response regulator receiver; KEGG: rsp:RSP_0149 CheY-like receiver protein; response regulator receiver protein complement(1878612..1879049) Rhodobacter sphaeroides ATCC 17029 4897354 YP_001043662.1 CDS Rsph17029_1783 NC_009049.1 1879046 1880530 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rsp:RSP_0150 CHASE sensor signal transducdtion histidine kinase; multi-sensor signal transduction histidine kinase complement(1879046..1880530) Rhodobacter sphaeroides ATCC 17029 4897036 YP_001043663.1 CDS Rsph17029_1784 NC_009049.1 1880847 1881965 D PFAM: ATPase associated with various cellular activities, AAA_3; SMART: AAA ATPase; KEGG: rsp:RSP_0152 P-loop ATPase; ATPase 1880847..1881965 Rhodobacter sphaeroides ATCC 17029 4897546 YP_001043664.1 CDS Rsph17029_1785 NC_009049.1 1881962 1883272 D KEGG: rsp:RSP_0151 hypothetical protein; hypothetical protein 1881962..1883272 Rhodobacter sphaeroides ATCC 17029 4895452 YP_001043665.1 CDS Rsph17029_1786 NC_009049.1 1883475 1884152 R KEGG: rsp:RSP_0153 hypothetical protein; hypothetical protein complement(1883475..1884152) Rhodobacter sphaeroides ATCC 17029 4895438 YP_001043666.1 CDS Rsph17029_1787 NC_009049.1 1884299 1885171 R KEGG: rsp:RSP_0154 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase complement(1884299..1885171) Rhodobacter sphaeroides ATCC 17029 4897934 YP_001043667.1 CDS Rsph17029_1788 NC_009049.1 1885168 1886199 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_0155 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(1885168..1886199) Rhodobacter sphaeroides ATCC 17029 4897479 YP_001043668.1 CDS Rsph17029_1789 NC_009049.1 1886196 1887335 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_0156 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1886196..1887335) Rhodobacter sphaeroides ATCC 17029 4897001 YP_001043669.1 CDS Rsph17029_1790 NC_009049.1 1887459 1887752 R KEGG: rsp:RSP_6098 hypothetical protein; hypothetical protein complement(1887459..1887752) Rhodobacter sphaeroides ATCC 17029 4896919 YP_001043670.1 CDS Rsph17029_1791 NC_009049.1 1887960 1888868 R KEGG: rsp:RSP_0157 beta-mannanase; beta-mannanase complement(1887960..1888868) Rhodobacter sphaeroides ATCC 17029 4896705 YP_001043671.1 CDS Rsph17029_1792 NC_009049.1 1888873 1890756 R KEGG: rsp:RSP_0158 cellulose synthase-like protein; cellulose synthase-like protein complement(1888873..1890756) Rhodobacter sphaeroides ATCC 17029 4896610 YP_001043672.1 CDS Rsph17029_1793 NC_009049.1 1890740 1891732 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0159 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1890740..1891732) Rhodobacter sphaeroides ATCC 17029 4896563 YP_001043673.1 CDS Rsph17029_1794 NC_009049.1 1891725 1892762 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0160 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(1891725..1892762) Rhodobacter sphaeroides ATCC 17029 4896379 YP_001043674.1 CDS Rsph17029_1795 NC_009049.1 1893624 1894724 D KEGG: rsp:RSP_0161 spermidine/putrescine-binding periplasmic protein; spermidine/putrescine-binding periplasmic protein 1893624..1894724 Rhodobacter sphaeroides ATCC 17029 4895874 YP_001043675.1 CDS Rsph17029_1796 NC_009049.1 1894841 1895032 D KEGG: rsp:RSP_0162 hypothetical protein; hypothetical protein 1894841..1895032 Rhodobacter sphaeroides ATCC 17029 4895687 YP_001043676.1 CDS Rsph17029_1797 NC_009049.1 1895103 1896776 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0163 putative iron(III) ABC transporter, fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein complement(1895103..1896776) Rhodobacter sphaeroides ATCC 17029 4895626 YP_001043677.1 CDS Rsph17029_1798 NC_009049.1 1896929 1897183 R KEGG: rsp:RSP_0164 hypothetical protein; hypothetical protein complement(1896929..1897183) Rhodobacter sphaeroides ATCC 17029 4895503 YP_001043678.1 CDS Rsph17029_1799 NC_009049.1 1897320 1897535 D KEGG: rsp:RSP_0165 hypothetical protein; hypothetical protein 1897320..1897535 Rhodobacter sphaeroides ATCC 17029 4895194 YP_001043679.1 CDS Rsph17029_1800 NC_009049.1 1897942 1898259 R KEGG: rsp:RSP_0166 DnaK suppressor protein; TraR/DksA family transcriptional regulator complement(1897942..1898259) Rhodobacter sphaeroides ATCC 17029 4897610 YP_001043680.1 CDS Rsph17029_1801 NC_009049.1 1898585 1899016 D PFAM: protein of unknown function DUF442; KEGG: rsp:RSP_0167 hypothetical protein; hypothetical protein 1898585..1899016 Rhodobacter sphaeroides ATCC 17029 4896271 YP_001043681.1 CDS Rsph17029_1802 NC_009049.1 1899277 1900248 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_6099 possible flagellar switch protein FliM; surface presentation of antigens (SPOA) protein complement(1899277..1900248) Rhodobacter sphaeroides ATCC 17029 4896265 YP_001043682.1 CDS Rsph17029_1803 NC_009049.1 1900373 1903057 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0169 Na+/solute symporter; integral membrane sensor signal transduction histidine kinase complement(1900373..1903057) Rhodobacter sphaeroides ATCC 17029 4895916 YP_001043683.1 CDS Rsph17029_1804 NC_009049.1 1903057 1903347 R KEGG: rsp:RSP_0170 hypothetical protein; hypothetical protein complement(1903057..1903347) Rhodobacter sphaeroides ATCC 17029 4896172 YP_001043684.1 CDS Rsph17029_1805 NC_009049.1 1903344 1903712 R PFAM: response regulator receiver; KEGG: rsp:RSP_0171 response regulator receiver protein; response regulator receiver protein complement(1903344..1903712) Rhodobacter sphaeroides ATCC 17029 4897646 YP_001043685.1 CDS Rsph17029_1806 NC_009049.1 1903874 1905160 R PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_0172 predicted transcriptional regulators; helix-turn-helix domain-containing protein complement(1903874..1905160) Rhodobacter sphaeroides ATCC 17029 4897265 YP_001043686.1 CDS Rsph17029_1807 NC_009049.1 1905297 1906142 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_0173 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1905297..1906142) Rhodobacter sphaeroides ATCC 17029 4895227 YP_001043687.1 CDS Rsph17029_1808 NC_009049.1 1906152 1906892 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_0174 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1906152..1906892) Rhodobacter sphaeroides ATCC 17029 4895702 YP_001043688.1 CDS Rsph17029_1809 NC_009049.1 1907085 1908026 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_0175 lactate dehydrogenase and related dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 1907085..1908026 Rhodobacter sphaeroides ATCC 17029 4896249 YP_001043689.1 CDS Rsph17029_1810 NC_009049.1 1908063 1909844 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(1908063..1909844) Rhodobacter sphaeroides ATCC 17029 4896032 YP_001043690.1 CDS Rsph17029_1811 NC_009049.1 1910308 1911690 D PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_0177 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 1910308..1911690 Rhodobacter sphaeroides ATCC 17029 4896588 YP_001043691.1 CDS Rsph17029_1812 NC_009049.1 1911735 1912715 R KEGG: rsp:RSP_0179 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components TauA complement(1911735..1912715) Rhodobacter sphaeroides ATCC 17029 4896912 YP_001043692.1 CDS Rsph17029_1813 NC_009049.1 1912745 1913596 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0180 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1912745..1913596) Rhodobacter sphaeroides ATCC 17029 4896811 YP_001043693.1 CDS Rsph17029_1814 NC_009049.1 1913593 1914456 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0181 ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1913593..1914456) Rhodobacter sphaeroides ATCC 17029 4895349 YP_001043694.1 CDS Rsph17029_1815 NC_009049.1 1914637 1915437 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO1785 ABC transporter, ATP-binding protein; ABC transporter complement(1914637..1915437) Rhodobacter sphaeroides ATCC 17029 4895508 YP_001043695.1 CDS Rsph17029_1816 NC_009049.1 1915437 1916888 R catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase complement(1915437..1916888) Rhodobacter sphaeroides ATCC 17029 4895492 YP_001043696.1 CDS Rsph17029_1817 NC_009049.1 1917017 1918276 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(1917017..1918276) Rhodobacter sphaeroides ATCC 17029 4897355 YP_001043697.1 CDS Rsph17029_1818 NC_009049.1 1918414 1919046 D PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; KEGG: rsp:RSP_0185 transcriptional regulator, TetR family; TetR family transcriptional regulator 1918414..1919046 Rhodobacter sphaeroides ATCC 17029 4897083 YP_001043698.1 CDS Rsph17029_1819 NC_009049.1 1919236 1919847 D PFAM: regulatory protein, TetR; Tetracycline transcriptional regulator YcdC, C-terminal domain protein; KEGG: rsp:RSP_0186 transcriptional regulator, TetR family; TetR family transcriptional regulator 1919236..1919847 Rhodobacter sphaeroides ATCC 17029 4896892 YP_001043699.1 CDS Rsph17029_1820 NC_009049.1 1919888 1921192 R catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase complement(1919888..1921192) Rhodobacter sphaeroides ATCC 17029 4896415 YP_001043700.1 CDS Rsph17029_1821 NC_009049.1 1921265 1921804 R KEGG: rsp:RSP_0188 uncharacterized membrane-associated protein; hypothetical protein complement(1921265..1921804) Rhodobacter sphaeroides ATCC 17029 4895858 YP_001043701.1 CDS gltD NC_009049.1 1921868 1923199 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(1921868..1923199) Rhodobacter sphaeroides ATCC 17029 4895352 YP_001043702.1 CDS Rsph17029_1823 NC_009049.1 1923477 1923971 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rsp:RSP_0190 biotin carboxyl carrier protein, AccB; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1923477..1923971 Rhodobacter sphaeroides ATCC 17029 4895268 YP_001043703.1 CDS Rsph17029_1824 NC_009049.1 1923979 1925325 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1923979..1925325 Rhodobacter sphaeroides ATCC 17029 4895274 YP_001043704.1 CDS aat NC_009049.1 1925345 1925989 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1925345..1925989 Rhodobacter sphaeroides ATCC 17029 4895392 YP_001043705.1 CDS Rsph17029_1826 NC_009049.1 1925938 1926309 R KEGG: rsp:RSP_0193 hypothetical protein; hypothetical protein complement(1925938..1926309) Rhodobacter sphaeroides ATCC 17029 4896471 YP_001043706.1 CDS Rsph17029_1827 NC_009049.1 1926306 1926776 R PFAM: Mammalian cell entry related domain protein; KEGG: rsp:RSP_0194 possible ABC transporter, substrate-binding protein; hypothetical protein complement(1926306..1926776) Rhodobacter sphaeroides ATCC 17029 4895809 YP_001043707.1 CDS Rsph17029_1828 NC_009049.1 1926776 1927150 R Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase complement(1926776..1927150) Rhodobacter sphaeroides ATCC 17029 4896367 YP_001043708.1 CDS clpX NC_009049.1 1927275 1928540 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1927275..1928540) Rhodobacter sphaeroides ATCC 17029 4896905 YP_001043709.1 CDS clpP NC_009049.1 1928665 1929297 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1928665..1929297) Rhodobacter sphaeroides ATCC 17029 4896970 YP_001043710.1 CDS Rsph17029_1831 NC_009049.1 1929464 1930072 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0198 phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase complement(1929464..1930072) Rhodobacter sphaeroides ATCC 17029 4897300 YP_001043711.1 CDS Rsph17029_1832 NC_009049.1 1930187 1931392 D KEGG: rsp:RSP_0200 ABC transporter, periplasmic binding protein; putative ABC transporter solute-binding protein 1930187..1931392 Rhodobacter sphaeroides ATCC 17029 4895300 YP_001043712.1 CDS Rsph17029_1833 NC_009049.1 1931389 1933077 D KEGG: rsp:RSP_0201 ABC transporter, fused inner membrane subunits; ABC transporter inner membrane protein 1931389..1933077 Rhodobacter sphaeroides ATCC 17029 4895577 YP_001043713.1 CDS Rsph17029_1834 NC_009049.1 1933074 1933718 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_6101 ABC transporter, ATPase subunit; ABC transporter 1933074..1933718 Rhodobacter sphaeroides ATCC 17029 4895225 YP_001043714.1 CDS Rsph17029_1835 NC_009049.1 1933851 1934321 D PFAM: Allergen V5/Tpx-1 family protein; KEGG: rsp:RSP_0202 hypothetical protein; Allergen V5/Tpx-1 family protein 1933851..1934321 Rhodobacter sphaeroides ATCC 17029 4896603 YP_001043715.1 CDS Rsph17029_1836 NC_009049.1 1934398 1935717 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0203 signal transduction kinase protein; integral membrane sensor signal transduction histidine kinase complement(1934398..1935717) Rhodobacter sphaeroides ATCC 17029 4896898 YP_001043716.1 CDS Rsph17029_1837 NC_009049.1 1935758 1936669 D PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0204 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1935758..1936669 Rhodobacter sphaeroides ATCC 17029 4896600 YP_001043717.1 CDS Rsph17029_1839 NC_009049.1 1937182 1939245 R PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_0218 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(1937182..1939245) Rhodobacter sphaeroides ATCC 17029 4896465 YP_001043718.1 CDS Rsph17029_1840 NC_009049.1 1939830 1940261 R KEGG: rsp:RSP_4165 transposase IS66; transposase IS66 complement(1939830..1940261) Rhodobacter sphaeroides ATCC 17029 4896219 YP_001043719.1 CDS Rsph17029_1842 NC_009049.1 1940515 1940856 R KEGG: rsp:RSP_3313 possible phage integrase family protein; putative phage integrase family protein complement(1940515..1940856) Rhodobacter sphaeroides ATCC 17029 4896407 YP_001043720.1 CDS Rsph17029_1844 NC_009049.1 1941635 1942522 D KEGG: nar:Saro_2176 hypothetical protein; hypothetical protein 1941635..1942522 Rhodobacter sphaeroides ATCC 17029 4897184 YP_001043721.1 CDS Rsph17029_1845 NC_009049.1 1942589 1944514 D PFAM: protein of unknown function DUF262; KEGG: rha:RHA1_ro01680 hypothetical protein; hypothetical protein 1942589..1944514 Rhodobacter sphaeroides ATCC 17029 4897108 YP_001043722.1 CDS Rsph17029_1846 NC_009049.1 1944598 1948110 D PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rpa:RPA2218 possible ATP-dependent RNA helicase; helicase domain-containing protein 1944598..1948110 Rhodobacter sphaeroides ATCC 17029 4897145 YP_001043723.1 CDS Rsph17029_1847 NC_009049.1 1948115 1948543 D KEGG: bmb:BruAb1_0743 transcriptional regulator, Cro/CI family; hypothetical protein 1948115..1948543 Rhodobacter sphaeroides ATCC 17029 4895305 YP_001043724.1 CDS Rsph17029_1848 NC_009049.1 1948540 1951446 D PFAM: protein of unknown function DUF1156; KEGG: rpa:RPA2220 putative DNA methylase; hypothetical protein 1948540..1951446 Rhodobacter sphaeroides ATCC 17029 4897233 YP_001043725.1 CDS Rsph17029_1849 NC_009049.1 1951458 1954754 D KEGG: rpa:RPA2221 hypothetical protein; hypothetical protein 1951458..1954754 Rhodobacter sphaeroides ATCC 17029 4897601 YP_001043726.1 CDS Rsph17029_1850 NC_009049.1 1955692 1955949 R hypothetical protein complement(1955692..1955949) Rhodobacter sphaeroides ATCC 17029 4897146 YP_001043727.1 CDS Rsph17029_1851 NC_009049.1 1955946 1956620 R PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sil:SPO3675 hypothetical protein; peptidase M15A complement(1955946..1956620) Rhodobacter sphaeroides ATCC 17029 4895393 YP_001043728.1 CDS Rsph17029_1852 NC_009049.1 1956693 1956947 R KEGG: nwi:Nwi_1946 probable transmembrane protein; putative transmembrane protein complement(1956693..1956947) Rhodobacter sphaeroides ATCC 17029 4895282 YP_001043729.1 CDS Rsph17029_1853 NC_009049.1 1957008 1957670 D KEGG: eba:ebA806 hypothetical protein; hypothetical protein 1957008..1957670 Rhodobacter sphaeroides ATCC 17029 4897550 YP_001043730.1 CDS Rsph17029_1854 NC_009049.1 1957838 1958782 R KEGG: rxy:Rxyl_0343 methyltransferase type 12; type 12 methyltransferase complement(1957838..1958782) Rhodobacter sphaeroides ATCC 17029 4897141 YP_001043731.1 CDS Rsph17029_1855 NC_009049.1 1958793 1959464 R PFAM: Uracil-DNA glycosylase superfamily; KEGG: cph:Cpha266_2236 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein complement(1958793..1959464) Rhodobacter sphaeroides ATCC 17029 4896196 YP_001043732.1 CDS Rsph17029_1856 NC_009049.1 1959464 1960120 R KEGG: aeh:Mlg_0506 hypothetical protein; hypothetical protein complement(1959464..1960120) Rhodobacter sphaeroides ATCC 17029 4897078 YP_001043733.1 CDS Rsph17029_1857 NC_009049.1 1960316 1962151 D PFAM: N-6 DNA methylase; KEGG: ccr:CC0620 type I restriction-modification system, M subunit, putative; N-6 DNA methylase 1960316..1962151 Rhodobacter sphaeroides ATCC 17029 4897679 YP_001043734.1 CDS Rsph17029_1858 NC_009049.1 1962148 1963518 D PFAM: restriction modification system DNA specificity domain; KEGG: syc:syc0484_c type I restriction-modification; restriction modification system DNA specificity subunit 1962148..1963518 Rhodobacter sphaeroides ATCC 17029 4897276 YP_001043735.1 CDS Rsph17029_1859 NC_009049.1 1963520 1966621 D PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: bps:BPSL0945 type I restriction enzyme, R subunit; hypothetical protein 1963520..1966621 Rhodobacter sphaeroides ATCC 17029 4896845 YP_001043736.1 CDS Rsph17029_1860 NC_009049.1 1966658 1967323 D hypothetical protein 1966658..1967323 Rhodobacter sphaeroides ATCC 17029 4896733 YP_001043737.1 CDS Rsph17029_1861 NC_009049.1 1967320 1967655 D KEGG: mlo:mlr6150 transposase; hypothetical protein 1967320..1967655 Rhodobacter sphaeroides ATCC 17029 4896537 YP_001043738.1 CDS Rsph17029_1862 NC_009049.1 1967738 1968238 D hypothetical protein 1967738..1968238 Rhodobacter sphaeroides ATCC 17029 4897018 YP_001043739.1 CDS Rsph17029_1863 NC_009049.1 1968391 1969797 D KEGG: sil:SPO1237 hypothetical protein; hypothetical protein 1968391..1969797 Rhodobacter sphaeroides ATCC 17029 4895403 YP_001043740.1 CDS Rsph17029_1864 NC_009049.1 1969977 1971023 D PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 1969977..1971023 Rhodobacter sphaeroides ATCC 17029 4897326 YP_001043741.1 CDS Rsph17029_1865 NC_009049.1 1971598 1972275 D KEGG: pfl:PFL_3336 hypothetical protein; hypothetical protein 1971598..1972275 Rhodobacter sphaeroides ATCC 17029 4895279 YP_001043742.1 CDS Rsph17029_1866 NC_009049.1 1972682 1973554 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_1649 possible transporter, DMT superfamily; hypothetical protein 1972682..1973554 Rhodobacter sphaeroides ATCC 17029 4895840 YP_001043743.1 CDS Rsph17029_1867 NC_009049.1 1975887 1976333 R KEGG: rsp:RSP_6104 calcium-binding protein; calcium-binding protein complement(1975887..1976333) Rhodobacter sphaeroides ATCC 17029 4896599 YP_001043744.1 CDS Rsph17029_1868 NC_009049.1 1976665 1977714 D PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; FAE1/Type III polyketide synthase-like protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: rsp:RSP_0226 naringenin-chalcone synthase; chalcone/stilbene synthase domain-containing protein 1976665..1977714 Rhodobacter sphaeroides ATCC 17029 4896235 YP_001043745.1 CDS Rsph17029_1869 NC_009049.1 1977711 1978214 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rsp:RSP_0227 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1977711..1978214 Rhodobacter sphaeroides ATCC 17029 4896942 YP_001043746.1 CDS Rsph17029_1870 NC_009049.1 1978201 1979799 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_0229 multidrug efflux pump, MF superfamily; EmrB/QacA family drug resistance transporter 1978201..1979799 Rhodobacter sphaeroides ATCC 17029 4897724 YP_001043747.1 CDS Rsph17029_1871 NC_009049.1 1979747 1980700 R KEGG: rsp:RSP_0228 putative hemin transport protein; putative hemin transport protein complement(1979747..1980700) Rhodobacter sphaeroides ATCC 17029 4897889 YP_001043748.1 CDS Rsph17029_1872 NC_009049.1 1980787 1982382 R KEGG: rsp:RSP_0230 neutral zinc metallopeptidase; PFAM: Hemolysin-type calcium-binding region; Peptidase M10, serralysin-like; SMART: peptidase, metallopeptidases; serralysin complement(1980787..1982382) Rhodobacter sphaeroides ATCC 17029 4895193 YP_001043749.1 CDS Rsph17029_1873 NC_009049.1 1982415 1982822 R KEGG: rsp:RSP_6105 hypothetical protein; hypothetical protein complement(1982415..1982822) Rhodobacter sphaeroides ATCC 17029 4896046 YP_001043750.1 CDS Rsph17029_1874 NC_009049.1 1982960 1984060 R PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0231 flagellar MotB protein; OmpA/MotB domain-containing protein complement(1982960..1984060) Rhodobacter sphaeroides ATCC 17029 4896597 YP_001043751.1 CDS Rsph17029_1875 NC_009049.1 1984070 1984831 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0233 flagellar motor protein MotA; MotA/TolQ/ExbB proton channel complement(1984070..1984831) Rhodobacter sphaeroides ATCC 17029 4895937 YP_001043752.1 CDS Rsph17029_1876 NC_009049.1 1985342 1986454 R PFAM: chemotaxis sensory transducer; KEGG: rsp:RSP_0234 TlpL, putative cytoplasmic chemoreceptor; methyl-accepting chemotaxis sensory transducer complement(1985342..1986454) Rhodobacter sphaeroides ATCC 17029 4895444 YP_001043753.1 CDS Rsph17029_1877 NC_009049.1 1986856 1987290 R KEGG: rsp:RSP_6106 hypothetical protein; hypothetical protein complement(1986856..1987290) Rhodobacter sphaeroides ATCC 17029 4896616 YP_001043754.1 CDS moaA NC_009049.1 1987344 1988411 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1987344..1988411 Rhodobacter sphaeroides ATCC 17029 4897268 YP_001043755.1 CDS Rsph17029_1879 NC_009049.1 1988704 1990047 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0236 AgaE protein; FAD dependent oxidoreductase complement(1988704..1990047) Rhodobacter sphaeroides ATCC 17029 4896189 YP_001043756.1 CDS Rsph17029_1880 NC_009049.1 1990047 1991210 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase complement(1990047..1991210) Rhodobacter sphaeroides ATCC 17029 4895255 YP_001043757.1 CDS Rsph17029_1881 NC_009049.1 1991348 1992631 R KEGG: rsp:RSP_0238 hypothetical protein; hypothetical protein complement(1991348..1992631) Rhodobacter sphaeroides ATCC 17029 4895267 YP_001043758.1 CDS Rsph17029_1882 NC_009049.1 1992916 1994364 R PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: rsp:RSP_0239 pyridine nucleotide transhydrogenase beta subunit; NAD(P) transhydrogenase subunit beta complement(1992916..1994364) Rhodobacter sphaeroides ATCC 17029 4895477 YP_001043759.1 CDS pntA NC_009049.1 1994375 1995946 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(1994375..1995946) Rhodobacter sphaeroides ATCC 17029 4895635 YP_001043760.1 CDS Rsph17029_1884 NC_009049.1 1996085 1996528 R KEGG: rsp:RSP_0241 putative protein-S-isoprenylcysteine methyltransferase; putative protein-S-isoprenylcysteine methyltransferase complement(1996085..1996528) Rhodobacter sphaeroides ATCC 17029 4895960 YP_001043761.1 CDS Rsph17029_1885 NC_009049.1 1996557 1997840 D TIGRFAM: kynureninase; PFAM: aminotransferase, class V; KEGG: rsp:RSP_0242 probable kyurenine hydrolase; kynureninase 1996557..1997840 Rhodobacter sphaeroides ATCC 17029 4895975 YP_001043762.1 CDS Rsph17029_1886 NC_009049.1 1998064 1999092 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_0243 putative lipoprotein; ErfK/YbiS/YcfS/YnhG family protein 1998064..1999092 Rhodobacter sphaeroides ATCC 17029 4895994 YP_001043763.1 CDS Rsph17029_1887 NC_009049.1 1999479 2000324 R PFAM: peptidase C26; KEGG: rsp:RSP_0244 predicted glutamine amidotransferase; peptidase C26 complement(1999479..2000324) Rhodobacter sphaeroides ATCC 17029 4896040 YP_001043764.1 CDS Rsph17029_1888 NC_009049.1 2000551 2001753 R PFAM: aminotransferase, class V; KEGG: rsp:RSP_0245 serine-pyruvate aminotransferase/aspartate aminotransferase; class V aminotransferase complement(2000551..2001753) Rhodobacter sphaeroides ATCC 17029 4896178 YP_001043765.1 CDS Rsph17029_1889 NC_009049.1 2001924 2003696 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0246 ABC lipid efflux transporter, fused ATPase and inner membrane subunits; ABC transporter 2001924..2003696 Rhodobacter sphaeroides ATCC 17029 4896305 YP_001043766.1 CDS Rsph17029_1890 NC_009049.1 2003686 2004453 D PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_0247 aminomethyltransferase related to GcvT; glycine cleavage T protein (aminomethyl transferase) 2003686..2004453 Rhodobacter sphaeroides ATCC 17029 4896688 YP_001043767.1 CDS Rsph17029_1891 NC_009049.1 2004599 2005162 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(2004599..2005162) Rhodobacter sphaeroides ATCC 17029 4896751 YP_001043768.1 CDS Rsph17029_1892 NC_009049.1 2005371 2005697 D KEGG: rsp:RSP_6107 hypothetical protein; hypothetical protein 2005371..2005697 Rhodobacter sphaeroides ATCC 17029 4896863 YP_001043769.1 CDS Rsph17029_1893 NC_009049.1 2006107 2006811 R KEGG: rsp:RSP_0250 hypothetical protein; hypothetical protein complement(2006107..2006811) Rhodobacter sphaeroides ATCC 17029 4897336 YP_001043770.1 CDS Rsph17029_1894 NC_009049.1 2006963 2008363 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rsp:RSP_0251 outer membrane efflux protein; TolC family type I secretion outer membrane protein complement(2006963..2008363) Rhodobacter sphaeroides ATCC 17029 4897469 YP_001043771.1 CDS Rsph17029_1895 NC_009049.1 2008411 2009064 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: rsp:RSP_0252 protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(2008411..2009064) Rhodobacter sphaeroides ATCC 17029 4897677 YP_001043772.1 CDS Rsph17029_1896 NC_009049.1 2009232 2010614 D PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0253 glycine/D-amino acid oxidase (deaminating); FAD dependent oxidoreductase 2009232..2010614 Rhodobacter sphaeroides ATCC 17029 4895741 YP_001043773.1 CDS Rsph17029_1897 NC_009049.1 2010641 2012587 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2010641..2012587) Rhodobacter sphaeroides ATCC 17029 4898064 YP_001043774.1 CDS Rsph17029_1898 NC_009049.1 2012761 2013009 R KEGG: rsp:RSP_0255 intrinsic membrane PufX protien; intrinsic membrane PufX protien complement(2012761..2013009) Rhodobacter sphaeroides ATCC 17029 4897188 YP_001043775.1 CDS Rsph17029_1899 NC_009049.1 2013022 2013948 R TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: rsp:RSP_0256 PufM, photosynthetic reaction center M subunit; photosynthetic reaction center subunit M complement(2013022..2013948) Rhodobacter sphaeroides ATCC 17029 4897011 YP_001043776.1 CDS Rsph17029_1900 NC_009049.1 2013941 2014789 R TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rsp:RSP_0257 PufL, photosynthetic reaction center L subunit; photosynthetic reaction center subunit L complement(2013941..2014789) Rhodobacter sphaeroides ATCC 17029 4897387 YP_001043777.1 CDS Rsph17029_1901 NC_009049.1 2014913 2015089 R PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_0258 LHI alpha, light-harvesting B875 protein; antenna complex subunit alpha/beta complement(2014913..2015089) Rhodobacter sphaeroides ATCC 17029 4897586 YP_001043778.1 CDS Rsph17029_1902 NC_009049.1 2015103 2015252 R PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6108 LHI beta, light-harvesting B875 subunit; antenna complex subunit alpha/beta complement(2015103..2015252) Rhodobacter sphaeroides ATCC 17029 4895510 YP_001043779.1 CDS Rsph17029_1903 NC_009049.1 2015383 2015616 R PFAM: PufQ cytochrome subunit; KEGG: rsp:RSP_0259 protein PufQ; PufQ cytochrome subunit complement(2015383..2015616) Rhodobacter sphaeroides ATCC 17029 4896784 YP_001043780.1 CDS Rsph17029_1904 NC_009049.1 2015613 2017088 R TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; KEGG: rsp:RSP_0260 putative chlorophyllide reductase, BchZ subunit; chlorophyllide reductase subunit Z complement(2015613..2017088) Rhodobacter sphaeroides ATCC 17029 4895089 YP_001043781.1 CDS Rsph17029_1905 NC_009049.1 2017088 2018596 R TIGRFAM: chlorophyllide reductase subunit Y; KEGG: rsp:RSP_0261 chlorophyllide reductase, BchY subunit; chlorophyllide reductase subunit Y complement(2017088..2018596) Rhodobacter sphaeroides ATCC 17029 4897757 YP_001043782.1 CDS Rsph17029_1906 NC_009049.1 2018672 2019673 R KEGG: rsp:RSP_0262 chlorophyllide reductase, BchX subunit; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X complement(2018672..2019673) Rhodobacter sphaeroides ATCC 17029 4897886 YP_001043783.1 CDS Rsph17029_1907 NC_009049.1 2019670 2020626 R TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0263 chlorophyll synthesis pathway, BchC; chlorophyll synthesis pathway protein BchC complement(2019670..2020626) Rhodobacter sphaeroides ATCC 17029 4895137 YP_001043784.1 CDS Rsph17029_1908 NC_009049.1 2020779 2021918 R PFAM: O-methyltransferase, family 2; KEGG: rsp:RSP_0264 hydroxyneurosporene methyltransferase; O-methyltransferase family protein complement(2020779..2021918) Rhodobacter sphaeroides ATCC 17029 4897237 YP_001043785.1 CDS Rsph17029_1909 NC_009049.1 2021971 2022849 R PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_0265 geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase complement(2021971..2022849) Rhodobacter sphaeroides ATCC 17029 4896089 YP_001043786.1 CDS Rsph17029_1910 NC_009049.1 2022982 2024469 D TIGRFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_0266 methoxyneurosporene dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2022982..2024469 Rhodobacter sphaeroides ATCC 17029 4897363 YP_001043787.1 CDS Rsph17029_1911 NC_009049.1 2024535 2025374 D PFAM: hydroxyneurosporene synthase; KEGG: rsp:RSP_0267 hydroxyneurosporene dehydrogenase; hydroxyneurosporene synthase 2024535..2025374 Rhodobacter sphaeroides ATCC 17029 4897291 YP_001043788.1 CDS Rsph17029_1912 NC_009049.1 2025536 2026015 R PFAM: TspO/MBR family protein; KEGG: rsp:RSP_0269 tryptophan rich sensory protein; TspO and MBR like proteins complement(2025536..2026015) Rhodobacter sphaeroides ATCC 17029 4897077 YP_001043789.1 CDS Rsph17029_1913 NC_009049.1 2026044 2027111 R PFAM: Squalene/phytoene synthase; KEGG: rsp:RSP_0270 squalene/phytoene synthase; squalene/phytoene synthase complement(2026044..2027111) Rhodobacter sphaeroides ATCC 17029 4897516 YP_001043790.1 CDS Rsph17029_1914 NC_009049.1 2027108 2028664 R TIGRFAM: Phytoene dehydrogenase-related protein; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_0271 phytoene dehydrogenase; phytoene dehydrogenase-related protein complement(2027108..2028664) Rhodobacter sphaeroides ATCC 17029 4897196 YP_001043791.1 CDS Rsph17029_1915 NC_009049.1 2028822 2029796 D KEGG: rsp:RSP_0272 spheroidene monooxygenase; spheroidene monooxygenase 2028822..2029796 Rhodobacter sphaeroides ATCC 17029 4897471 YP_001043792.1 CDS bchI NC_009049.1 2029801 2030805 D involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit I 2029801..2030805 Rhodobacter sphaeroides ATCC 17029 4896869 YP_001043793.1 CDS bchD NC_009049.1 2030820 2032496 D involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 2030820..2032496 Rhodobacter sphaeroides ATCC 17029 4897464 YP_001043794.1 CDS Rsph17029_1918 NC_009049.1 2032499 2033365 D PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0275 magnesium-chelatase, BchO; alpha/beta hydrolase 2032499..2033365 Rhodobacter sphaeroides ATCC 17029 4897000 YP_001043795.1 CDS Rsph17029_1919 NC_009049.1 2033614 2034159 R KEGG: rsp:RSP_0276 isopentenyl-diphosphate delta-isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase complement(2033614..2034159) Rhodobacter sphaeroides ATCC 17029 4897279 YP_001043796.1 CDS Rsph17029_1920 NC_009049.1 2034150 2035334 R TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; Lycopene beta and epsilon cyclase; KEGG: rsp:RSP_0277 geranylgeranyl hydrogenase; geranylgeranyl reductase complement(2034150..2035334) Rhodobacter sphaeroides ATCC 17029 4896513 YP_001043797.1 CDS Rsph17029_1921 NC_009049.1 2035337 2036620 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0278 putative light-harvesting 1 (B870) complex assembly protein PucC; PUCC protein complement(2035337..2036620) Rhodobacter sphaeroides ATCC 17029 4896798 YP_001043798.1 CDS Rsph17029_1922 NC_009049.1 2036617 2037525 R TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rsp:RSP_0279 bacteriochlorophyll a synthase; bacteriochlorophyll/chlorophyll a synthase complement(2036617..2037525) Rhodobacter sphaeroides ATCC 17029 4895085 YP_001043799.1 CDS Rsph17029_1923 NC_009049.1 2037599 2038219 R TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; KEGG: rsp:RSP_0280 bacteriochlorophyll synthase, 23 kDa subunit (BchJ); bacteriochlorophyll 4-vinyl reductase complement(2037599..2038219) Rhodobacter sphaeroides ATCC 17029 4895158 YP_001043800.1 CDS Rsph17029_1924 NC_009049.1 2038226 2040064 R KEGG: rsp:RSP_0281 magnesium-protoporphyrin IX monomethylester oxidative cyclase, 66 kDa subunit(BchE); TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase complement(2038226..2040064) Rhodobacter sphaeroides ATCC 17029 4895094 YP_001043801.1 CDS Rsph17029_1925 NC_009049.1 2040212 2041606 R KEGG: rsp:RSP_0282 transcriptional regulator, PpsR; TIGRFAM: PAS sensor protein; transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; Fis family transcriptional regulator complement(2040212..2041606) Rhodobacter sphaeroides ATCC 17029 4897618 YP_001043802.1 CDS Rsph17029_1926 NC_009049.1 2041665 2042459 R KEGG: rsp:RSP_0283 regulatory protein, PpaA; regulatory protein, PpaA complement(2041665..2042459) Rhodobacter sphaeroides ATCC 17029 4897463 YP_001043803.1 CDS Rsph17029_1927 NC_009049.1 2042787 2043314 D PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rsp:RSP_0284 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 2042787..2043314 Rhodobacter sphaeroides ATCC 17029 4895097 YP_001043804.1 CDS Rsph17029_1928 NC_009049.1 2043311 2044597 D light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 2043311..2044597 Rhodobacter sphaeroides ATCC 17029 4896974 YP_001043805.1 CDS Rsph17029_1929 NC_009049.1 2044668 2046272 D light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 2044668..2046272 Rhodobacter sphaeroides ATCC 17029 4895064 YP_001043806.1 CDS bchH NC_009049.1 2046262 2049843 D involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H 2046262..2049843 Rhodobacter sphaeroides ATCC 17029 4895098 YP_001043807.1 CDS chlL NC_009049.1 2049905 2050798 D light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 2049905..2050798 Rhodobacter sphaeroides ATCC 17029 4896997 YP_001043808.1 CDS Rsph17029_1932 NC_009049.1 2050842 2051510 D catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 2050842..2051510 Rhodobacter sphaeroides ATCC 17029 4897179 YP_001043809.1 CDS Rsph17029_1933 NC_009049.1 2051507 2052946 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0290 light-harvesting 1 (B870) complex assembly; PUCC protein 2051507..2052946 Rhodobacter sphaeroides ATCC 17029 4896975 YP_001043810.1 CDS Rsph17029_1934 NC_009049.1 2052965 2053747 D TIGRFAM: photosynthetic reaction center H subunit; PFAM: photosynthetic reaction centre, H-chain; PRC-barrel domain protein; KEGG: rsp:RSP_0291 reaction centre H protein; photosynthetic reaction center subunit H 2052965..2053747 Rhodobacter sphaeroides ATCC 17029 4897269 YP_001043811.1 CDS Rsph17029_1935 NC_009049.1 2053874 2054518 D KEGG: rsp:RSP_0292 hypothetical protein; hypothetical protein 2053874..2054518 Rhodobacter sphaeroides ATCC 17029 4895735 YP_001043812.1 CDS Rsph17029_1936 NC_009049.1 2054595 2055059 D KEGG: rsp:RSP_0293 hypothetical protein; hypothetical protein 2054595..2055059 Rhodobacter sphaeroides ATCC 17029 4896497 YP_001043813.1 CDS Rsph17029_1937 NC_009049.1 2055081 2055377 D KEGG: rsp:RSP_6110 hypothetical protein; hypothetical protein 2055081..2055377 Rhodobacter sphaeroides ATCC 17029 4895104 YP_001043814.1 CDS Rsph17029_1938 NC_009049.1 2055374 2056465 D oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 2055374..2056465 Rhodobacter sphaeroides ATCC 17029 4895112 YP_001043815.1 CDS Rsph17029_1939 NC_009049.1 2056527 2057399 D KEGG: rsp:RSP_0295 hypothetical protein; hypothetical protein 2056527..2057399 Rhodobacter sphaeroides ATCC 17029 4895114 YP_001043816.1 CDS Rsph17029_1940 NC_009049.1 2057739 2058176 D PFAM: cytochrome c, class I; KEGG: rsp:RSP_0296 cytochrome c2; cytochrome c, class I 2057739..2058176 Rhodobacter sphaeroides ATCC 17029 4895130 YP_001043817.1 CDS Rsph17029_1941 NC_009049.1 2058579 2059277 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0297 ABC branched chain amino acid transporter, ATPase subunit; ABC transporter complement(2058579..2059277) Rhodobacter sphaeroides ATCC 17029 4895136 YP_001043818.1 CDS Rsph17029_1942 NC_009049.1 2059274 2060017 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0298 ABC branched chain amino acid transporter, ATPase subunit; ABC transporter complement(2059274..2060017) Rhodobacter sphaeroides ATCC 17029 4895145 YP_001043819.1 CDS Rsph17029_1943 NC_009049.1 2060014 2061246 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_0299 ABC branched chain amino acid transporter, inner membrane subunit; inner-membrane translocator complement(2060014..2061246) Rhodobacter sphaeroides ATCC 17029 4895156 YP_001043820.1 CDS Rsph17029_1944 NC_009049.1 2061613 2063541 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_0300 ABC branched chain amino acid transporter, inner membrane subunit; inner-membrane translocator complement(2061613..2063541) Rhodobacter sphaeroides ATCC 17029 4897850 YP_001043821.1 CDS Rsph17029_1945 NC_009049.1 2063605 2064885 R KEGG: rsp:RSP_0301 ABC branched chain amino acid transporter, substrate binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(2063605..2064885) Rhodobacter sphaeroides ATCC 17029 4895283 YP_001043822.1 CDS Rsph17029_1946 NC_009049.1 2065184 2065807 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: rsp:RSP_0302 urease accessory protein G; urease accessory protein UreG complement(2065184..2065807) Rhodobacter sphaeroides ATCC 17029 4895161 YP_001043823.1 CDS Rsph17029_1947 NC_009049.1 2065804 2066436 R PFAM: Urease accessory protein UreF; KEGG: rsp:RSP_0303 urease accessory protein UreF; urease accessory protein UreF complement(2065804..2066436) Rhodobacter sphaeroides ATCC 17029 4895217 YP_001043824.1 CDS ureE NC_009049.1 2066433 2066981 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(2066433..2066981) Rhodobacter sphaeroides ATCC 17029 4895172 YP_001043825.1 CDS Rsph17029_1949 NC_009049.1 2067070 2067381 D hypothetical protein 2067070..2067381 Rhodobacter sphaeroides ATCC 17029 4895189 YP_001043826.1 CDS ureC NC_009049.1 2067399 2069105 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(2067399..2069105) Rhodobacter sphaeroides ATCC 17029 4895178 YP_001043827.1 CDS Rsph17029_1951 NC_009049.1 2069265 2070137 D KEGG: rsp:RSP_0306 class I diheme cytochrome c; class I diheme cytochrome c 2069265..2070137 Rhodobacter sphaeroides ATCC 17029 4895168 YP_001043828.1 CDS Rsph17029_1952 NC_009049.1 2070193 2070510 R KEGG: rsp:RSP_0307 antifreeze protein, type I; antifreeze protein, type I complement(2070193..2070510) Rhodobacter sphaeroides ATCC 17029 4895186 YP_001043829.1 CDS ureB NC_009049.1 2070535 2070840 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta complement(2070535..2070840) Rhodobacter sphaeroides ATCC 17029 4897858 YP_001043830.1 CDS ureA NC_009049.1 2070891 2071193 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(2070891..2071193) Rhodobacter sphaeroides ATCC 17029 4895198 YP_001043831.1 CDS Rsph17029_1955 NC_009049.1 2071205 2072032 R PFAM: Urease accessory protein UreD; KEGG: rsp:RSP_0310 urease accessory protein UreD; urease accessory protein UreD complement(2071205..2072032) Rhodobacter sphaeroides ATCC 17029 4895218 YP_001043832.1 CDS Rsph17029_1956 NC_009049.1 2072237 2073274 D PFAM: aminoglycoside phosphotransferase; KEGG: rsp:RSP_0311 putative aminotransferase protein; aminoglycoside phosphotransferase 2072237..2073274 Rhodobacter sphaeroides ATCC 17029 4895233 YP_001043833.1 CDS Rsph17029_1957 NC_009049.1 2073309 2074619 D PFAM: aminotransferase class-III; KEGG: rsp:RSP_0312 aminotransferase class-III; class III aminotransferase 2073309..2074619 Rhodobacter sphaeroides ATCC 17029 4895226 YP_001043834.1 CDS Rsph17029_1958 NC_009049.1 2075047 2075202 D PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_0314 LHII beta, light-harvesting B800/850 protein; antenna complex subunit alpha/beta 2075047..2075202 Rhodobacter sphaeroides ATCC 17029 4895280 YP_001043835.1 CDS Rsph17029_1959 NC_009049.1 2075218 2075382 D PFAM: antenna complex, alpha/beta subunit; KEGG: rsp:RSP_6256 LHII alpha, light-harvesting B800/850 protein; antenna complex subunit alpha/beta 2075218..2075382 Rhodobacter sphaeroides ATCC 17029 4896194 YP_001043836.1 CDS Rsph17029_1960 NC_009049.1 2075577 2076956 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0315 light-harvesting 1 (B870) complex assembly; PUCC protein 2075577..2076956 Rhodobacter sphaeroides ATCC 17029 4895301 YP_001043837.1 CDS Rsph17029_1961 NC_009049.1 2077354 2078097 D PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_0316 transcriptional regulator, LuxR family; response regulator receiver protein 2077354..2078097 Rhodobacter sphaeroides ATCC 17029 4895473 YP_001043838.1 CDS Rsph17029_1962 NC_009049.1 2078146 2079504 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(2078146..2079504) Rhodobacter sphaeroides ATCC 17029 4895077 YP_001043839.1 CDS Rsph17029_1963 NC_009049.1 2079578 2080273 R PFAM: NnrUfamily protein; KEGG: rsp:RSP_0318 hypothetical protein; NnrU family protein complement(2079578..2080273) Rhodobacter sphaeroides ATCC 17029 4895330 YP_001043840.1 CDS Rsph17029_1964 NC_009049.1 2080270 2080491 R KEGG: rsp:RSP_0319 NnrU; protein NnrU complement(2080270..2080491) Rhodobacter sphaeroides ATCC 17029 4895148 YP_001043841.1 CDS Rsph17029_1965 NC_009049.1 2080488 2080661 R KEGG: rsp:RSP_0320 NnrT; hypothetical protein complement(2080488..2080661) Rhodobacter sphaeroides ATCC 17029 4895314 YP_001043842.1 CDS Rsph17029_1966 NC_009049.1 2080663 2082537 R PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_0321 NorD nitric oxide reductase activation protein; von Willebrand factor type A domain-containing protein complement(2080663..2082537) Rhodobacter sphaeroides ATCC 17029 4897138 YP_001043843.1 CDS Rsph17029_1967 NC_009049.1 2082542 2083339 R PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: rsp:RSP_0322 NorQ protein required for nitric oxide reductase activity; ATPase complement(2082542..2083339) Rhodobacter sphaeroides ATCC 17029 4895331 YP_001043844.1 CDS Rsph17029_1968 NC_009049.1 2083336 2084676 R PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_0323 nitric oxide reductase large subunit, cytochrome b; cytochrome c oxidase subunit I complement(2083336..2084676) Rhodobacter sphaeroides ATCC 17029 4895259 YP_001043845.1 CDS Rsph17029_1969 NC_009049.1 2084690 2085142 R KEGG: rsp:RSP_0324 nitric oxide reductase subunit C, cytochrome c; nitric-oxide reductase complement(2084690..2085142) Rhodobacter sphaeroides ATCC 17029 4895374 YP_001043846.1 CDS Rsph17029_1970 NC_009049.1 2085292 2085498 D KEGG: rsp:RSP_0325 hypothetical protein; hypothetical protein 2085292..2085498 Rhodobacter sphaeroides ATCC 17029 4895402 YP_001043847.1 CDS Rsph17029_1971 NC_009049.1 2085672 2086208 D KEGG: rsp:RSP_0326 hypothetical protein; hypothetical protein 2085672..2086208 Rhodobacter sphaeroides ATCC 17029 4895448 YP_001043848.1 CDS Rsph17029_1972 NC_009049.1 2086216 2086917 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_0327 Crp-Fnr regulatory protein (NnrR); CRP/FNR family transcriptional regulator complement(2086216..2086917) Rhodobacter sphaeroides ATCC 17029 4897661 YP_001043849.1 CDS Rsph17029_1973 NC_009049.1 2087129 2088322 D PFAM: NnrS family protein; KEGG: rsp:RSP_0328 hypothetical protein; NnrS family protein 2087129..2088322 Rhodobacter sphaeroides ATCC 17029 4895442 YP_001043850.1 CDS Rsph17029_1974 NC_009049.1 2088456 2089466 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rsp:RSP_0329 GAF sensor diguanylate cyclase (GGDEF); diguanylate cyclase 2088456..2089466 Rhodobacter sphaeroides ATCC 17029 4895182 YP_001043851.1 CDS Rsph17029_1975 NC_009049.1 2089482 2090891 R KEGG: rsp:RSP_0330 hypothetical protein; hypothetical protein complement(2089482..2090891) Rhodobacter sphaeroides ATCC 17029 4895333 YP_001043852.1 CDS Rsph17029_1976 NC_009049.1 2090876 2091946 R PFAM: glycoside hydrolase, family 8; KEGG: rsp:RSP_0331 hypothetical protein; cellulase complement(2090876..2091946) Rhodobacter sphaeroides ATCC 17029 4895564 YP_001043853.1 CDS Rsph17029_1977 NC_009049.1 2091943 2094120 R KEGG: rsp:RSP_0332 possible cellulose synthase; putative cellulose synthase complement(2091943..2094120) Rhodobacter sphaeroides ATCC 17029 4895187 YP_001043854.1 CDS Rsph17029_1978 NC_009049.1 2094120 2096486 R PFAM: glycosyl transferase, family 2; type IV pilus assembly PilZ; KEGG: rsp:RSP_0333 possible cellulose synthase; cellulose synthase complement(2094120..2096486) Rhodobacter sphaeroides ATCC 17029 4895183 YP_001043855.1 CDS Rsph17029_1979 NC_009049.1 2096520 2097191 R KEGG: rsp:RSP_0334 hypothetical protein; hypothetical protein complement(2096520..2097191) Rhodobacter sphaeroides ATCC 17029 4895578 YP_001043856.1 CDS Rsph17029_1980 NC_009049.1 2097605 2099944 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: rsp:RSP_0335 probable dicyclicGMP cyclasephosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2097605..2099944 Rhodobacter sphaeroides ATCC 17029 4895629 YP_001043857.1 CDS Rsph17029_1981 NC_009049.1 2100035 2100856 R PFAM: metallophosphoesterase; KEGG: rsp:RSP_0337 possible phospodiesterase; metallophosphoesterase complement(2100035..2100856) Rhodobacter sphaeroides ATCC 17029 4895662 YP_001043858.1 CDS Rsph17029_1982 NC_009049.1 2100853 2101770 R PFAM: diacylglycerol kinase, catalytic region; KEGG: rsp:RSP_0338 hypothetical protein; diacylglycerol kinase catalytic subunit complement(2100853..2101770) Rhodobacter sphaeroides ATCC 17029 4895611 YP_001043859.1 CDS Rsph17029_1983 NC_009049.1 2101845 2102414 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0339 hypothetical protein; type 12 methyltransferase complement(2101845..2102414) Rhodobacter sphaeroides ATCC 17029 4895607 YP_001043860.1 CDS Rsph17029_1984 NC_009049.1 2102575 2103597 R PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_0340 hypothetical protein; hypothetical protein complement(2102575..2103597) Rhodobacter sphaeroides ATCC 17029 4895582 YP_001043861.1 CDS Rsph17029_1985 NC_009049.1 2103787 2105064 R Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase complement(2103787..2105064) Rhodobacter sphaeroides ATCC 17029 4895673 YP_001043862.1 CDS Rsph17029_1986 NC_009049.1 2105064 2106011 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_0342 putative ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(2105064..2106011) Rhodobacter sphaeroides ATCC 17029 4895667 YP_001043863.1 CDS Rsph17029_1987 NC_009049.1 2106103 2107146 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_0343 putative ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(2106103..2107146) Rhodobacter sphaeroides ATCC 17029 4895456 YP_001043864.1 CDS Rsph17029_1988 NC_009049.1 2107136 2108656 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0344 putative ABC sugar transporter, fused ATPase subunits; ABC transporter complement(2107136..2108656) Rhodobacter sphaeroides ATCC 17029 4895732 YP_001043865.1 CDS Rsph17029_1989 NC_009049.1 2108653 2109657 R PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_0345 possible ABC transporter, periplasmic binding protein; basic membrane lipoprotein complement(2108653..2109657) Rhodobacter sphaeroides ATCC 17029 4895775 YP_001043866.1 CDS Rsph17029_1990 NC_009049.1 2109928 2111028 D PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_0346 ABC transporter, substrate binding protein; extracellular solute-binding protein 2109928..2111028 Rhodobacter sphaeroides ATCC 17029 4895142 YP_001043867.1 CDS Rsph17029_1991 NC_009049.1 2111183 2112064 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0347 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2111183..2112064 Rhodobacter sphaeroides ATCC 17029 4896670 YP_001043868.1 CDS Rsph17029_1992 NC_009049.1 2112061 2112852 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0348 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2112061..2112852 Rhodobacter sphaeroides ATCC 17029 4895861 YP_001043869.1 CDS Rsph17029_1993 NC_009049.1 2112869 2113927 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0349 ABC transporter, ATPase subunit; ABC transporter 2112869..2113927 Rhodobacter sphaeroides ATCC 17029 4897197 YP_001043870.1 CDS Rsph17029_1994 NC_009049.1 2113981 2114409 D KEGG: rsp:RSP_0350 hypothetical protein; hypothetical protein 2113981..2114409 Rhodobacter sphaeroides ATCC 17029 4896099 YP_001043871.1 CDS Rsph17029_1995 NC_009049.1 2114452 2115477 D PFAM: aldo/keto reductase; KEGG: rsp:RSP_0351 D-threo-aldose 1-dehydrogenase; aldo/keto reductase 2114452..2115477 Rhodobacter sphaeroides ATCC 17029 4896113 YP_001043872.1 CDS Rsph17029_1996 NC_009049.1 2115635 2115958 R PFAM: ferredoxin; KEGG: rsp:RSP_0352 probable ferredoxin; ferredoxin complement(2115635..2115958) Rhodobacter sphaeroides ATCC 17029 4896144 YP_001043873.1 CDS Rsph17029_1997 NC_009049.1 2116071 2116493 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: rde:RD1_1924 DNA polymerase III alpha subunit, putative; tRNA/helicase-type nucleic acid binding protein 2116071..2116493 Rhodobacter sphaeroides ATCC 17029 4896139 YP_001043874.1 CDS Rsph17029_1998 NC_009049.1 2116772 2117227 D KEGG: rsp:RSP_0354 hypothetical protein; hypothetical protein 2116772..2117227 Rhodobacter sphaeroides ATCC 17029 4896153 YP_001043875.1 CDS Rsph17029_1999 NC_009049.1 2117282 2118802 R TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rsp:RSP_0355 possible serine protease; protease Do complement(2117282..2118802) Rhodobacter sphaeroides ATCC 17029 4896200 YP_001043876.1 CDS Rsph17029_2000 NC_009049.1 2118916 2119938 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rsp:RSP_0356 probable HflC protein; HflC protein complement(2118916..2119938) Rhodobacter sphaeroides ATCC 17029 4895184 YP_001043877.1 CDS Rsph17029_2001 NC_009049.1 2119938 2121119 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rsp:RSP_0357 probable HflK protein; HflK protein complement(2119938..2121119) Rhodobacter sphaeroides ATCC 17029 4896341 YP_001043878.1 CDS Rsph17029_2002 NC_009049.1 2121175 2122533 R TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rsp:RSP_0358 probable glutathione reductase; glutathione-disulfide reductase complement(2121175..2122533) Rhodobacter sphaeroides ATCC 17029 4896939 YP_001043879.1 CDS Rsph17029_2003 NC_009049.1 2122538 2123326 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(2122538..2123326) Rhodobacter sphaeroides ATCC 17029 4896392 YP_001043880.1 CDS Rsph17029_2004 NC_009049.1 2123465 2123674 R KEGG: rsp:RSP_0360 hypothetical protein; hypothetical protein complement(2123465..2123674) Rhodobacter sphaeroides ATCC 17029 4897805 YP_001043881.1 CDS Rsph17029_2005 NC_009049.1 2123971 2125350 D KEGG: rsp:RSP_0361 probable L-serine dehydratase protein; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 2123971..2125350 Rhodobacter sphaeroides ATCC 17029 4896552 YP_001043882.1 CDS Rsph17029_2006 NC_009049.1 2125719 2126642 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0364 possible transporter, RarD family, DMT superfamily; hypothetical protein 2125719..2126642 Rhodobacter sphaeroides ATCC 17029 4896545 YP_001043883.1 CDS Rsph17029_2007 NC_009049.1 2126584 2127282 R TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; KEGG: rsp:RSP_0363 hypothetical protein; thiamine pyrophosphokinase complement(2126584..2127282) Rhodobacter sphaeroides ATCC 17029 4897967 YP_001043884.1 CDS Rsph17029_2008 NC_009049.1 2127334 2128215 R KEGG: rsp:RSP_0365 hypothetical protein; hypothetical protein complement(2127334..2128215) Rhodobacter sphaeroides ATCC 17029 4896625 YP_001043885.1 CDS Rsph17029_2009 NC_009049.1 2128318 2128560 R KEGG: rsp:RSP_6113 hypothetical protein; hypothetical protein complement(2128318..2128560) Rhodobacter sphaeroides ATCC 17029 4896731 YP_001043886.1 CDS Rsph17029_2010 NC_009049.1 2128640 2129932 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2128640..2129932) Rhodobacter sphaeroides ATCC 17029 4896862 YP_001043887.1 CDS secG NC_009049.1 2130243 2130854 D TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rsp:RSP_0367 preprotein translocase SecG subunit; preprotein translocase subunit SecG 2130243..2130854 Rhodobacter sphaeroides ATCC 17029 4896642 YP_001043888.1 CDS pyrG NC_009049.1 2131017 2132660 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2131017..2132660 Rhodobacter sphaeroides ATCC 17029 4896870 YP_001043889.1 CDS Rsph17029_2013 NC_009049.1 2132839 2133621 D PFAM: protein of unknown function DUF519; KEGG: rsp:RSP_0369 hypothetical protein; hypothetical protein 2132839..2133621 Rhodobacter sphaeroides ATCC 17029 4896831 YP_001043890.1 CDS Rsph17029_2014 NC_009049.1 2133699 2134136 D PFAM: protein of unknown function DUF1332; KEGG: rsp:RSP_0370 hypothetical protein; hypothetical protein 2133699..2134136 Rhodobacter sphaeroides ATCC 17029 4896903 YP_001043891.1 CDS Rsph17029_2015 NC_009049.1 2134300 2135097 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0371 ABC basic amino acid transporter, ATPase subunit; ABC transporter 2134300..2135097 Rhodobacter sphaeroides ATCC 17029 4896931 YP_001043892.1 CDS Rsph17029_2016 NC_009049.1 2135140 2135865 D PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_0372 ABC basic amino acid transporter, solute-binding protein; extracellular solute-binding protein 2135140..2135865 Rhodobacter sphaeroides ATCC 17029 4897845 YP_001043893.1 CDS Rsph17029_2017 NC_009049.1 2135905 2136786 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0373 ABC basic amino acid transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2135905..2136786 Rhodobacter sphaeroides ATCC 17029 4897037 YP_001043894.1 CDS Rsph17029_2018 NC_009049.1 2136783 2137610 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0374 ABC basic amino acid transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2136783..2137610 Rhodobacter sphaeroides ATCC 17029 4897870 YP_001043895.1 CDS Rsph17029_2019 NC_009049.1 2137615 2138952 D PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_0375 probable glutamine synthetase; glutamate--ammonia ligase 2137615..2138952 Rhodobacter sphaeroides ATCC 17029 4895171 YP_001043896.1 CDS Rsph17029_2020 NC_009049.1 2139012 2139689 D PFAM: glutamine amidotransferase class-I; KEGG: rsp:RSP_0376 glutamine amidotransferase class-I; glutamine amidotransferase 2139012..2139689 Rhodobacter sphaeroides ATCC 17029 4897171 YP_001043897.1 CDS Rsph17029_2021 NC_009049.1 2139805 2140068 R KEGG: bam:Bamb_2417 hypothetical protein; hypothetical protein complement(2139805..2140068) Rhodobacter sphaeroides ATCC 17029 4897216 YP_001043898.1 CDS Rsph17029_2022 NC_009049.1 2140292 2140522 R PFAM: Pathogenesis-related transcriptional factor and ERF protein; KEGG: ngo:NGO1102 hypothetical protein, putative phage associated protein; pathogenesis-related transcriptional factor and ERF protein complement(2140292..2140522) Rhodobacter sphaeroides ATCC 17029 4897819 YP_001043899.1 CDS Rsph17029_2023 NC_009049.1 2140600 2141421 R PFAM: Integrase, catalytic region; KEGG: bpm:BURPS1710b_1776 integrase core domain protein; integrase catalytic subunit complement(2140600..2141421) Rhodobacter sphaeroides ATCC 17029 4897429 YP_001043900.1 CDS Rsph17029_2024 NC_009049.1 2141418 2141735 R PFAM: transposase IS3/IS911 family protein; KEGG: sil:SPOA0091 IS3 family transposase orfA; transposase IS3/IS911 family protein complement(2141418..2141735) Rhodobacter sphaeroides ATCC 17029 4897508 YP_001043901.1 CDS Rsph17029_2026 NC_009049.1 2144901 2145833 D KEGG: rsp:RSP_6250 hypothetical protein; hypothetical protein 2144901..2145833 Rhodobacter sphaeroides ATCC 17029 4896539 YP_001043902.1 CDS Rsph17029_2027 NC_009049.1 2147151 2147708 R PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: bms:BR1082 site-specific recombinase, resolvase family; resolvase domain-containing protein complement(2147151..2147708) Rhodobacter sphaeroides ATCC 17029 4897624 YP_001043903.1 CDS Rsph17029_2028 NC_009049.1 2148006 2148893 D KEGG: dde:Dde_0780 hypothetical protein; hypothetical protein 2148006..2148893 Rhodobacter sphaeroides ATCC 17029 4897788 YP_001043904.1 CDS Rsph17029_2029 NC_009049.1 2148890 2151025 D PFAM: helicase domain protein; KEGG: dde:Dde_0781 helicase-like; helicase domain-containing protein 2148890..2151025 Rhodobacter sphaeroides ATCC 17029 4897657 YP_001043905.1 CDS Rsph17029_2030 NC_009049.1 2151144 2152241 R PFAM: phage integrase family protein; KEGG: psp:PSPPH_1897 chorismate mutase family protein; phage integrase family protein complement(2151144..2152241) Rhodobacter sphaeroides ATCC 17029 4897744 YP_001043906.1 CDS Rsph17029_2031 NC_009049.1 2152400 2153755 D PFAM: glutamine synthetase, catalytic region; KEGG: rsp:RSP_0377 probable glutamine synthetase; glutamate--ammonia ligase 2152400..2153755 Rhodobacter sphaeroides ATCC 17029 4897743 YP_001043907.1 CDS Rsph17029_2032 NC_009049.1 2153752 2155053 D PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0378 hypothetical protein; FAD dependent oxidoreductase 2153752..2155053 Rhodobacter sphaeroides ATCC 17029 4897780 YP_001043908.1 CDS Rsph17029_2033 NC_009049.1 2155357 2156724 D PFAM: aminotransferase class-III; KEGG: rsp:RSP_0379 putative aminotransferase protein; class III aminotransferase 2155357..2156724 Rhodobacter sphaeroides ATCC 17029 4897857 YP_001043909.1 CDS Rsph17029_2034 NC_009049.1 2156787 2157341 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: rsp:RSP_0380 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR complement(2156787..2157341) Rhodobacter sphaeroides ATCC 17029 4897807 YP_001043910.1 CDS Rsph17029_2035 NC_009049.1 2157469 2157945 R KEGG: rsp:RSP_0381 hypothetical protein; hypothetical protein complement(2157469..2157945) Rhodobacter sphaeroides ATCC 17029 4897862 YP_001043911.1 CDS Rsph17029_2036 NC_009049.1 2158072 2159877 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rsp:RSP_0382 poly-beta-hydroxybutyrate polymerase; poly(R)-hydroxyalkanoic acid synthase complement(2158072..2159877) Rhodobacter sphaeroides ATCC 17029 4897806 YP_001043912.1 CDS Rsph17029_2037 NC_009049.1 2159979 2161250 D TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rsp:RSP_0383 hypothetical protein; polyhydroxyalkanoate depolymerase 2159979..2161250 Rhodobacter sphaeroides ATCC 17029 4895522 YP_001043913.1 CDS Rsph17029_2038 NC_009049.1 2161318 2162064 R KEGG: rsp:RSP_0384 hypothetical protein; hypothetical protein complement(2161318..2162064) Rhodobacter sphaeroides ATCC 17029 4897877 YP_001043914.1 CDS thrS NC_009049.1 2162225 2164165 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2162225..2164165 Rhodobacter sphaeroides ATCC 17029 4897922 YP_001043915.1 CDS Rsph17029_2040 NC_009049.1 2164675 2164881 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_0386 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 2164675..2164881 Rhodobacter sphaeroides ATCC 17029 4897992 YP_001043916.1 CDS Rsph17029_2041 NC_009049.1 2164942 2165268 R PFAM: arsenate reductase and related; KEGG: rsp:RSP_0387 hypothetical protein; arsenate reductase-like protein complement(2164942..2165268) Rhodobacter sphaeroides ATCC 17029 4897960 YP_001043917.1 CDS Rsph17029_2042 NC_009049.1 2165335 2165739 R KEGG: rsp:RSP_0388 hypothetical protein; hypothetical protein complement(2165335..2165739) Rhodobacter sphaeroides ATCC 17029 4896737 YP_001043918.1 CDS Rsph17029_2043 NC_009049.1 2165773 2166252 R PFAM: dihydrofolate reductase region; KEGG: rsp:RSP_0389 dihydrofolate reductase; dihydrofolate reductase complement(2165773..2166252) Rhodobacter sphaeroides ATCC 17029 4895417 YP_001043919.1 CDS Rsph17029_2044 NC_009049.1 2166252 2167148 R PFAM: thymidylate synthase; KEGG: rsp:RSP_0390 thymidylate synthase; thymidylate synthase complement(2166252..2167148) Rhodobacter sphaeroides ATCC 17029 4895736 YP_001043920.1 CDS Rsph17029_2045 NC_009049.1 2167435 2167863 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_0392 probable lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2167435..2167863 Rhodobacter sphaeroides ATCC 17029 4895959 YP_001043921.1 CDS Rsph17029_2046 NC_009049.1 2168025 2169095 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: rsp:RSP_0393 probable riboflavin biosynthesis protein; riboflavin biosynthesis protein RibD complement(2168025..2169095) Rhodobacter sphaeroides ATCC 17029 4897654 YP_001043922.1 CDS nrdR NC_009049.1 2169110 2169577 R PFAM: ATP-cone domain protein; KEGG: rsp:RSP_0394 hypothetical protein; transcriptional regulator NrdR complement(2169110..2169577) Rhodobacter sphaeroides ATCC 17029 4896208 YP_001043923.1 CDS Rsph17029_2048 NC_009049.1 2169799 2170179 R KEGG: rsp:RSP_0396 hypothetical protein; hypothetical protein complement(2169799..2170179) Rhodobacter sphaeroides ATCC 17029 4896734 YP_001043924.1 CDS Rsph17029_2049 NC_009049.1 2170191 2172197 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(2170191..2172197) Rhodobacter sphaeroides ATCC 17029 4897206 YP_001043925.1 CDS dnaG NC_009049.1 2172302 2174233 R synthesizes RNA primers at the replication forks; DNA primase complement(2172302..2174233) Rhodobacter sphaeroides ATCC 17029 4896458 YP_001043926.1 CDS Rsph17029_2051 NC_009049.1 2174357 2175784 R PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: rsp:RSP_0398 dehydrogenase; Glu/Leu/Phe/Val dehydrogenase complement(2174357..2175784) Rhodobacter sphaeroides ATCC 17029 4897089 YP_001043927.1 CDS Rsph17029_2052 NC_009049.1 2176148 2177848 D KEGG: rsp:RSP_0399 hypothetical protein; hypothetical protein 2176148..2177848 Rhodobacter sphaeroides ATCC 17029 4897499 YP_001043928.1 CDS Rsph17029_2053 NC_009049.1 2177845 2178402 D KEGG: rsp:RSP_0400 hypothetical protein; hypothetical protein 2177845..2178402 Rhodobacter sphaeroides ATCC 17029 4896394 YP_001043929.1 CDS Rsph17029_2054 NC_009049.1 2178406 2178942 D KEGG: rsp:RSP_0401 hypothetical protein; hypothetical protein 2178406..2178942 Rhodobacter sphaeroides ATCC 17029 4896385 YP_001043930.1 CDS Rsph17029_2055 NC_009049.1 2178991 2179611 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_0402 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2178991..2179611) Rhodobacter sphaeroides ATCC 17029 4897421 YP_001043931.1 CDS Rsph17029_2056 NC_009049.1 2179747 2179989 D hypothetical protein 2179747..2179989 Rhodobacter sphaeroides ATCC 17029 4896594 YP_001043932.1 CDS Rsph17029_2057 NC_009049.1 2180079 2181365 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2180079..2181365 Rhodobacter sphaeroides ATCC 17029 4896601 YP_001043933.1 CDS glpX NC_009049.1 2181428 2182393 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2181428..2182393 Rhodobacter sphaeroides ATCC 17029 4896376 YP_001043934.1 CDS Rsph17029_2059 NC_009049.1 2182390 2184141 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: rsp:RSP_0405 probable single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 2182390..2184141 Rhodobacter sphaeroides ATCC 17029 4896171 YP_001043935.1 CDS Rsph17029_2060 NC_009049.1 2184353 2185432 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: rsp:RSP_0406 periplasmic sensor diguanylate cyclase (GGDEF); diguanylate cyclase complement(2184353..2185432) Rhodobacter sphaeroides ATCC 17029 4895914 YP_001043936.1 CDS Rsph17029_2061 NC_009049.1 2185609 2186604 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_0407 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(2185609..2186604) Rhodobacter sphaeroides ATCC 17029 4895499 YP_001043937.1 CDS Rsph17029_2062 NC_009049.1 2186806 2187744 D KEGG: rsp:RSP_0408 hypothetical protein; hypothetical protein 2186806..2187744 Rhodobacter sphaeroides ATCC 17029 4895754 YP_001043938.1 CDS Rsph17029_2063 NC_009049.1 2187762 2188619 D PFAM: CHAD domain containing protein; KEGG: rsp:RSP_0409 hypothetical protein; CHAD domain-containing protein 2187762..2188619 Rhodobacter sphaeroides ATCC 17029 4896871 YP_001043939.1 CDS Rsph17029_2064 NC_009049.1 2188640 2189647 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_0410 sensor diguanylate cyclase (GGDEF); diguanylate cyclase complement(2188640..2189647) Rhodobacter sphaeroides ATCC 17029 4897961 YP_001043940.1 CDS Rsph17029_2065 NC_009049.1 2189647 2190234 R PFAM: Heme NO binding domain protein; KEGG: rsp:RSP_6114 hypothetical protein; heme NO binding domain-containing protein complement(2189647..2190234) Rhodobacter sphaeroides ATCC 17029 4895860 YP_001043941.1 CDS Rsph17029_2066 NC_009049.1 2190298 2192019 R KEGG: rsp:RSP_0411 hypothetical protein; hypothetical protein complement(2190298..2192019) Rhodobacter sphaeroides ATCC 17029 4896420 YP_001043942.1 CDS Rsph17029_2067 NC_009049.1 2192142 2192834 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0412 putative phosphatase; HAD family hydrolase complement(2192142..2192834) Rhodobacter sphaeroides ATCC 17029 4896794 YP_001043943.1 CDS Rsph17029_2068 NC_009049.1 2192890 2193168 R KEGG: rsp:RSP_6115 hypothetical protein; hypothetical protein complement(2192890..2193168) Rhodobacter sphaeroides ATCC 17029 4897980 YP_001043944.1 CDS Rsph17029_2069 NC_009049.1 2193297 2194682 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rsp:RSP_0413 two component diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 2193297..2194682 Rhodobacter sphaeroides ATCC 17029 4895128 YP_001043945.1 CDS Rsph17029_2070 NC_009049.1 2194835 2195362 R KEGG: rsp:RSP_0414 hypothetical protein; hypothetical protein complement(2194835..2195362) Rhodobacter sphaeroides ATCC 17029 4896112 YP_001043946.1 CDS Rsph17029_2071 NC_009049.1 2195364 2195723 R KEGG: rsp:RSP_6227 hypothetical protein; hypothetical protein complement(2195364..2195723) Rhodobacter sphaeroides ATCC 17029 4895263 YP_001043947.1 CDS Rsph17029_2072 NC_009049.1 2195725 2196318 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(2195725..2196318) Rhodobacter sphaeroides ATCC 17029 4898013 YP_001043948.1 CDS Rsph17029_2073 NC_009049.1 2196395 2197033 R SMART: Calcium-binding EF-hand-containing protein; KEGG: rsp:RSP_0416 putative calcium-binding EF-hand domain protein; signal transduction protein complement(2196395..2197033) Rhodobacter sphaeroides ATCC 17029 4896258 YP_001043949.1 CDS Rsph17029_2074 NC_009049.1 2197235 2197645 D PFAM: protein of unknown function DUF983; KEGG: rsp:RSP_0418 hypothetical protein; hypothetical protein 2197235..2197645 Rhodobacter sphaeroides ATCC 17029 4896752 YP_001043950.1 CDS Rsph17029_2075 NC_009049.1 2197614 2198291 D PFAM: NUDIX hydrolase; KEGG: rsp:RSP_0419 hypothetical protein; NUDIX hydrolase 2197614..2198291 Rhodobacter sphaeroides ATCC 17029 4896470 YP_001043951.1 CDS Rsph17029_2076 NC_009049.1 2198360 2198734 R KEGG: rsp:RSP_0420 hypothetical protein; hypothetical protein complement(2198360..2198734) Rhodobacter sphaeroides ATCC 17029 4895628 YP_001043952.1 CDS Rsph17029_2077 NC_009049.1 2198750 2199250 R PFAM: Lipocalin family protein; KEGG: rsp:RSP_0421 putative outer membrane lipoprotein Blc; lipocalin family protein complement(2198750..2199250) Rhodobacter sphaeroides ATCC 17029 4897488 YP_001043953.1 CDS Rsph17029_2078 NC_009049.1 2199238 2199684 R KEGG: rsp:RSP_0422 hypothetical protein; hypothetical protein complement(2199238..2199684) Rhodobacter sphaeroides ATCC 17029 4896550 YP_001043954.1 CDS Rsph17029_2079 NC_009049.1 2199763 2200803 R PFAM: aldo/keto reductase; KEGG: rsp:RSP_0423 aldo/keto reductase; aldo/keto reductase complement(2199763..2200803) Rhodobacter sphaeroides ATCC 17029 4897979 YP_001043955.1 CDS Rsph17029_2080 NC_009049.1 2201070 2201678 D KEGG: rsp:RSP_0424 hypothetical protein; hypothetical protein 2201070..2201678 Rhodobacter sphaeroides ATCC 17029 4895749 YP_001043956.1 CDS Rsph17029_2081 NC_009049.1 2201822 2203540 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2201822..2203540 Rhodobacter sphaeroides ATCC 17029 4896544 YP_001043957.1 CDS Rsph17029_2082 NC_009049.1 2203817 2206315 R PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: rsp:RSP_0426 putative Na+/H+ antiporter with cyclic nucleotide-binding domain; cyclic nucleotide-binding protein complement(2203817..2206315) Rhodobacter sphaeroides ATCC 17029 4897016 YP_001043958.1 CDS Rsph17029_2083 NC_009049.1 2206389 2206718 R KEGG: rsp:RSP_0427 hypothetical protein; hypothetical protein complement(2206389..2206718) Rhodobacter sphaeroides ATCC 17029 4896907 YP_001043959.1 CDS Rsph17029_2084 NC_009049.1 2207062 2208384 R KEGG: rsp:RSP_0428 hypothetical protein; hypothetical protein complement(2207062..2208384) Rhodobacter sphaeroides ATCC 17029 4895310 YP_001043960.1 CDS Rsph17029_2085 NC_009049.1 2208647 2210503 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0429 probable ABC drug/toxin efflux transporter; fused ATPase and inner membrane subunits; ABC transporter 2208647..2210503 Rhodobacter sphaeroides ATCC 17029 4896807 YP_001043961.1 CDS Rsph17029_2086 NC_009049.1 2210526 2210747 R KEGG: rsp:RSP_6228 hypothetical protein; hypothetical protein complement(2210526..2210747) Rhodobacter sphaeroides ATCC 17029 4897122 YP_001043962.1 CDS Rsph17029_2087 NC_009049.1 2210953 2211888 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rsp:RSP_0430 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 2210953..2211888 Rhodobacter sphaeroides ATCC 17029 4895765 YP_001043963.1 CDS Rsph17029_2088 NC_009049.1 2212090 2213310 R TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rsp:RSP_0431 putative selenocysteine lyase; SufS subfamily cysteine desulfurase complement(2212090..2213310) Rhodobacter sphaeroides ATCC 17029 4896117 YP_001043964.1 CDS Rsph17029_2089 NC_009049.1 2213320 2213898 R KEGG: rsp:RSP_0432 hypothetical protein; hypothetical protein complement(2213320..2213898) Rhodobacter sphaeroides ATCC 17029 4895632 YP_001043965.1 CDS Rsph17029_2090 NC_009049.1 2213895 2214374 R KEGG: rsp:RSP_0433 hypothetical protein; hypothetical protein complement(2213895..2214374) Rhodobacter sphaeroides ATCC 17029 4897530 YP_001043966.1 CDS Rsph17029_2091 NC_009049.1 2214375 2215658 R PFAM: SufBD protein; KEGG: rde:RD1_2692 FeS assembly protein SufD, putative; SufBD protein complement(2214375..2215658) Rhodobacter sphaeroides ATCC 17029 4897562 YP_001043967.1 CDS Rsph17029_2092 NC_009049.1 2215658 2216416 R KEGG: rsp:RSP_0437 Suf C, ATPase; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC complement(2215658..2216416) Rhodobacter sphaeroides ATCC 17029 4896326 YP_001043968.1 CDS Rsph17029_2093 NC_009049.1 2216426 2216737 R PFAM: protein of unknown function DUF74; KEGG: rsp:RSP_0439 hypothetical protein; hypothetical protein complement(2216426..2216737) Rhodobacter sphaeroides ATCC 17029 4895867 YP_001043969.1 CDS Rsph17029_2094 NC_009049.1 2216772 2218301 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(2216772..2218301) Rhodobacter sphaeroides ATCC 17029 4895974 YP_001043970.1 CDS Rsph17029_2095 NC_009049.1 2218377 2219423 R PFAM: aminotransferase, class V; KEGG: rsp:RSP_0442 putative aminotransferase; cysteine desulfurase complement(2218377..2219423) Rhodobacter sphaeroides ATCC 17029 4897015 YP_001043971.1 CDS Rsph17029_2096 NC_009049.1 2219506 2219973 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_0443 Rrf2 family transcriptional regulator; BadM/Rrf2 family transcriptional regulator complement(2219506..2219973) Rhodobacter sphaeroides ATCC 17029 4897920 YP_001043972.1 CDS Rsph17029_2097 NC_009049.1 2220127 2220786 D KEGG: rsp:RSP_0444 hypothetical protein; hypothetical protein 2220127..2220786 Rhodobacter sphaeroides ATCC 17029 4895481 YP_001043973.1 CDS Rsph17029_2098 NC_009049.1 2220783 2221367 D KEGG: rsp:RSP_0445 hypothetical protein; hypothetical protein 2220783..2221367 Rhodobacter sphaeroides ATCC 17029 4896621 YP_001043974.1 CDS Rsph17029_2099 NC_009049.1 2221452 2222666 D Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2221452..2222666 Rhodobacter sphaeroides ATCC 17029 4896564 YP_001043975.1 CDS Rsph17029_2100 NC_009049.1 2222976 2223578 D PFAM: protein of unknown function DUF161; KEGG: rsp:RSP_0447 hypothetical protein; hypothetical protein 2222976..2223578 Rhodobacter sphaeroides ATCC 17029 4896289 YP_001043976.1 CDS Rsph17029_2101 NC_009049.1 2223678 2225498 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rsp:RSP_0448 EF-Tu; elongation factor Tu; GTP-binding protein TypA 2223678..2225498 Rhodobacter sphaeroides ATCC 17029 4896411 YP_001043977.1 CDS Rsph17029_2102 NC_009049.1 2225543 2226337 R KEGG: rsp:RSP_0449 putative glutamine amidotransferase; putative glutamine amidotransferase complement(2225543..2226337) Rhodobacter sphaeroides ATCC 17029 4897378 YP_001043978.1 CDS Rsph17029_2103 NC_009049.1 2226493 2226783 R PFAM: protein of unknown function DUF1330; KEGG: rsp:RSP_0450 hypothetical protein; hypothetical protein complement(2226493..2226783) Rhodobacter sphaeroides ATCC 17029 4897503 YP_001043979.1 CDS alaS NC_009049.1 2226785 2229436 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2226785..2229436) Rhodobacter sphaeroides ATCC 17029 4897394 YP_001043980.1 CDS recA NC_009049.1 2229523 2230596 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2229523..2230596) Rhodobacter sphaeroides ATCC 17029 4897662 YP_001043981.1 CDS Rsph17029_2106 NC_009049.1 2230791 2231381 D KEGG: rsp:RSP_0453 hypothetical protein; hypothetical protein 2230791..2231381 Rhodobacter sphaeroides ATCC 17029 4897598 YP_001043982.1 CDS Rsph17029_2107 NC_009049.1 2231385 2233697 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_0454 multisensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(2231385..2233697) Rhodobacter sphaeroides ATCC 17029 4897474 YP_001043983.1 CDS Rsph17029_2108 NC_009049.1 2233785 2234948 R PFAM: Fmu (Sun) domain protein; KEGG: rsp:RSP_0455 possible NOL1/NOP2/sun family protein; Fmu (Sun) domain-containing protein complement(2233785..2234948) Rhodobacter sphaeroides ATCC 17029 4897393 YP_001043984.1 CDS Rsph17029_2109 NC_009049.1 2235039 2235818 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_0457 probable glycerol-3-phosphate regulon repressor; DeoR family transcriptional regulator 2235039..2235818 Rhodobacter sphaeroides ATCC 17029 4897230 YP_001043985.1 CDS Rsph17029_2110 NC_009049.1 2235815 2236522 R KEGG: rsp:RSP_0456 hypothetical protein; hypothetical protein complement(2235815..2236522) Rhodobacter sphaeroides ATCC 17029 4897033 YP_001043986.1 CDS Rsph17029_2111 NC_009049.1 2236500 2236916 R KEGG: rsp:RSP_0458 hypothetical protein; hypothetical protein complement(2236500..2236916) Rhodobacter sphaeroides ATCC 17029 4896710 YP_001043987.1 CDS Rsph17029_2112 NC_009049.1 2237210 2238292 D PFAM: protein of unknown function DUF475; KEGG: rsp:RSP_0459 hypothetical protein; hypothetical protein 2237210..2238292 Rhodobacter sphaeroides ATCC 17029 4896542 YP_001043988.1 CDS Rsph17029_2113 NC_009049.1 2238636 2241827 R PFAM: acriflavin resistance protein; KEGG: rsp:RSP_0460 AcrB/AcrD/AcrF family cation/multidrug efflux pump; acriflavin resistance protein complement(2238636..2241827) Rhodobacter sphaeroides ATCC 17029 4896212 YP_001043989.1 CDS Rsph17029_2114 NC_009049.1 2241820 2242773 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rsp:RSP_0461 multidrug/cation efflux pump, membrane fusion protein (MFP) family; RND family efflux transporter MFP subunit complement(2241820..2242773) Rhodobacter sphaeroides ATCC 17029 4896529 YP_001043990.1 CDS Rsph17029_2115 NC_009049.1 2243119 2244006 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rsp:RSP_0463 cation efflux transporter, CDF family; cation diffusion facilitator family transporter complement(2243119..2244006) Rhodobacter sphaeroides ATCC 17029 4895543 YP_001043991.1 CDS Rsph17029_2116 NC_009049.1 2244137 2245033 R PFAM: peptidase U32; KEGG: rsp:RSP_0464 putative protease; peptidase U32 complement(2244137..2245033) Rhodobacter sphaeroides ATCC 17029 4895554 YP_001043992.1 CDS Rsph17029_2117 NC_009049.1 2245038 2246018 R PFAM: peptidase U32; KEGG: rsp:RSP_0465 putative protease; peptidase U32 complement(2245038..2246018) Rhodobacter sphaeroides ATCC 17029 4895395 YP_001043993.1 CDS Rsph17029_2118 NC_009049.1 2246018 2246542 R KEGG: rsp:RSP_0466 hypothetical protein; hypothetical protein complement(2246018..2246542) Rhodobacter sphaeroides ATCC 17029 4896131 YP_001043994.1 CDS Rsph17029_2119 NC_009049.1 2246667 2248160 D TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: rsp:RSP_0467 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 2246667..2248160 Rhodobacter sphaeroides ATCC 17029 4895601 YP_001043995.1 CDS Rsph17029_2120 NC_009049.1 2248157 2248711 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: rsp:RSP_0468 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2248157..2248711 Rhodobacter sphaeroides ATCC 17029 4895195 YP_001043996.1 CDS Rsph17029_2121 NC_009049.1 2248839 2250029 R catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase complement(2248839..2250029) Rhodobacter sphaeroides ATCC 17029 4895762 YP_001043997.1 CDS Rsph17029_2122 NC_009049.1 2250144 2251661 R KEGG: rsp:RSP_0470 hypothetical protein; hypothetical protein complement(2250144..2251661) Rhodobacter sphaeroides ATCC 17029 4895149 YP_001043998.1 CDS Rsph17029_2123 NC_009049.1 2251821 2252153 D KEGG: rsp:RSP_6116 hypothetical protein; hypothetical protein 2251821..2252153 Rhodobacter sphaeroides ATCC 17029 4896980 YP_001043999.1 CDS Rsph17029_2124 NC_009049.1 2252258 2252980 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0472 hypothetical protein; endonuclease/exonuclease/phosphatase 2252258..2252980 Rhodobacter sphaeroides ATCC 17029 4897254 YP_001044000.1 CDS Rsph17029_2125 NC_009049.1 2252977 2254527 D PFAM: phospholipase D/Transphosphatidylase; KEGG: rsp:RSP_0473 phospholipase-D family protein; phospholipase D/transphosphatidylase 2252977..2254527 Rhodobacter sphaeroides ATCC 17029 4896374 YP_001044001.1 CDS Rsph17029_2126 NC_009049.1 2254747 2255196 D PFAM: cytochrome c, class II; KEGG: rsp:RSP_0474 cytochrome c'; cytochrome c, class II 2254747..2255196 Rhodobacter sphaeroides ATCC 17029 4897671 YP_001044002.1 CDS Rsph17029_2127 NC_009049.1 2255200 2255799 D PFAM: cytochrome B561; KEGG: rsp:RSP_0475 cytochrome b; cytochrome B561 2255200..2255799 Rhodobacter sphaeroides ATCC 17029 4896986 YP_001044003.1 CDS Rsph17029_2128 NC_009049.1 2255838 2256482 R PFAM: class II aldolase/adducin family protein; KEGG: rsp:RSP_0476 L-fuculose-phosphate aldolase; L-fuculose phosphate aldolase complement(2255838..2256482) Rhodobacter sphaeroides ATCC 17029 4897446 YP_001044004.1 CDS Rsph17029_2129 NC_009049.1 2256819 2258315 D KEGG: rsp:RSP_0477 hypothetical protein; hypothetical protein 2256819..2258315 Rhodobacter sphaeroides ATCC 17029 4897374 YP_001044005.1 CDS Rsph17029_2130 NC_009049.1 2258446 2259573 R PFAM: tRNA synthetase, class II (D, K and N); KEGG: rsp:RSP_0478 putative lysyl-tRNA synthetase; lysine--tRNA ligase complement(2258446..2259573) Rhodobacter sphaeroides ATCC 17029 4897316 YP_001044006.1 CDS Rsph17029_2131 NC_009049.1 2259585 2260151 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2259585..2260151 Rhodobacter sphaeroides ATCC 17029 4897580 YP_001044007.1 CDS Rsph17029_2132 NC_009049.1 2260239 2261633 R PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: rsp:RSP_0480 D-mannonate oxidoreductase; fructuronate reductase complement(2260239..2261633) Rhodobacter sphaeroides ATCC 17029 4897637 YP_001044008.1 CDS Rsph17029_2133 NC_009049.1 2261623 2262348 R TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0481 possible 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase complement(2261623..2262348) Rhodobacter sphaeroides ATCC 17029 4897651 YP_001044009.1 CDS Rsph17029_2134 NC_009049.1 2262345 2263169 R 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase complement(2262345..2263169) Rhodobacter sphaeroides ATCC 17029 4897672 YP_001044010.1 CDS Rsph17029_2135 NC_009049.1 2263311 2263613 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_0483 hypothetical protein; cupin complement(2263311..2263613) Rhodobacter sphaeroides ATCC 17029 4895531 YP_001044011.1 CDS Rsph17029_2136 NC_009049.1 2263621 2264901 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0484 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP dicarboxylate transporter subunit DctM complement(2263621..2264901) Rhodobacter sphaeroides ATCC 17029 4895338 YP_001044012.1 CDS Rsph17029_2137 NC_009049.1 2264904 2265449 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0485 TRAP-T family transporter, DctQ (4 TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ complement(2264904..2265449) Rhodobacter sphaeroides ATCC 17029 4895307 YP_001044013.1 CDS Rsph17029_2138 NC_009049.1 2265513 2266490 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0487 TRAP-T family transporter, DctP (periplasmic binding) subunit; TRAP dicarboxylate transporter subunit DctP complement(2265513..2266490) Rhodobacter sphaeroides ATCC 17029 4895223 YP_001044014.1 CDS Rsph17029_2139 NC_009049.1 2266516 2267922 R catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase complement(2266516..2267922) Rhodobacter sphaeroides ATCC 17029 4896596 YP_001044015.1 CDS Rsph17029_2140 NC_009049.1 2268026 2268742 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_0489 GntR family transcriptional regulator; GntR family transcriptional regulator 2268026..2268742 Rhodobacter sphaeroides ATCC 17029 4896676 YP_001044016.1 CDS Rsph17029_2141 NC_009049.1 2268724 2269632 D PFAM: PfkB domain protein; KEGG: rsp:RSP_0490 carbohydrate kinase; ribokinase-like domain-containing protein 2268724..2269632 Rhodobacter sphaeroides ATCC 17029 4895630 YP_001044017.1 CDS Rsph17029_2142 NC_009049.1 2270059 2271390 D KEGG: rsp:RSP_0491 hydrogen uptake histidine-kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2270059..2271390 Rhodobacter sphaeroides ATCC 17029 4895214 YP_001044018.1 CDS Rsph17029_2143 NC_009049.1 2271387 2272379 D PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rsp:RSP_0492 hydrogenase small subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 2271387..2272379 Rhodobacter sphaeroides ATCC 17029 4896234 YP_001044019.1 CDS Rsph17029_2144 NC_009049.1 2272376 2273803 D PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rsp:RSP_0493 hydrogenase large subunit; hydrogen:quinone oxidoreductase 2272376..2273803 Rhodobacter sphaeroides ATCC 17029 4896179 YP_001044020.1 CDS Rsph17029_2145 NC_009049.1 2273965 2276241 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: rsp:RSP_0494 hydrogenase maturation factor F; (NiFe) hydrogenase maturation protein HypF 2273965..2276241 Rhodobacter sphaeroides ATCC 17029 4897238 YP_001044021.1 CDS Rsph17029_2146 NC_009049.1 2276478 2277587 D KEGG: rsp:RSP_0495 hydrogenase protein small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2276478..2277587 Rhodobacter sphaeroides ATCC 17029 4897103 YP_001044022.1 CDS Rsph17029_2147 NC_009049.1 2277591 2279381 D PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rsp:RSP_0496 hydrogenase protein large subunit; nickel-dependent hydrogenase, large subunit 2277591..2279381 Rhodobacter sphaeroides ATCC 17029 4896867 YP_001044023.1 CDS Rsph17029_2148 NC_009049.1 2279393 2279968 D PFAM: HupE/UreJ protein; KEGG: rsp:RSP_0497 HupE/UreJ accessory protein; HupE/UreJ protein 2279393..2279968 Rhodobacter sphaeroides ATCC 17029 4896451 YP_001044024.1 CDS Rsph17029_2149 NC_009049.1 2279973 2280758 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rsp:RSP_0498 Ni, Fe hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2279973..2280758 Rhodobacter sphaeroides ATCC 17029 4896462 YP_001044025.1 CDS Rsph17029_2150 NC_009049.1 2281049 2281669 D TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rsp:RSP_0499 HycI, hydrogenase maturation protease; hydrogenase expression/formation protein 2281049..2281669 Rhodobacter sphaeroides ATCC 17029 4896543 YP_001044026.1 CDS Rsph17029_2151 NC_009049.1 2281669 2281986 D PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rsp:RSP_0500 putative HupF/HypC hydrogenase protein; hydrogenase expression/formation protein HupF/HypC 2281669..2281986 Rhodobacter sphaeroides ATCC 17029 4897258 YP_001044027.1 CDS Rsph17029_2152 NC_009049.1 2281983 2282369 D PFAM: hydrogenase-1 expression HyaE; KEGG: rsp:RSP_0501 HupG hydrogenase expression/formation protein; hydrogenase-1 expression HyaE 2281983..2282369 Rhodobacter sphaeroides ATCC 17029 4895204 YP_001044028.1 CDS Rsph17029_2153 NC_009049.1 2282381 2283199 D PFAM: HupH hydrogenase expression protein; KEGG: rsp:RSP_0502 HupH hydrogenase expression/formation protein; HupH hydrogenase expression protein 2282381..2283199 Rhodobacter sphaeroides ATCC 17029 4896398 YP_001044029.1 CDS Rsph17029_2154 NC_009049.1 2283196 2283954 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rsp:RSP_0503 HupJ, contains rubredoxin domain; rubredoxin-type Fe(Cys)4 protein 2283196..2283954 Rhodobacter sphaeroides ATCC 17029 4896427 YP_001044030.1 CDS Rsph17029_2155 NC_009049.1 2283951 2284763 D KEGG: rsp:RSP_0504 HupK; HupK protein 2283951..2284763 Rhodobacter sphaeroides ATCC 17029 4897020 YP_001044031.1 CDS Rsph17029_2156 NC_009049.1 2284756 2285097 D TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rsp:RSP_0505 hydrogenase expression/synthesis, HypA family; hydrogenase nickel incorporation protein HypA 2284756..2285097 Rhodobacter sphaeroides ATCC 17029 4897783 YP_001044032.1 CDS Rsph17029_2157 NC_009049.1 2285097 2285966 D TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rsp:RSP_0506 NI2+-binding GTPase protein HypB; hydrogenase nickel incorporation protein HypB 2285097..2285966 Rhodobacter sphaeroides ATCC 17029 4898093 YP_001044033.1 CDS Rsph17029_2158 NC_009049.1 2285966 2287441 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: rsp:RSP_0507 HupR response regulator; two component, sigma54 specific, Fis family transcriptional regulator 2285966..2287441 Rhodobacter sphaeroides ATCC 17029 4896225 YP_001044034.1 CDS Rsph17029_2159 NC_009049.1 2287443 2287733 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rsp:RSP_0508 hydrogenase expression/formation protein HypC; hydrogenase assembly chaperone HypC/HupF 2287443..2287733 Rhodobacter sphaeroides ATCC 17029 4896237 YP_001044035.1 CDS Rsph17029_2160 NC_009049.1 2287730 2288869 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rsp:RSP_0509 hydrogenase isoenzyme formation protein HypD; hydrogenase expression/formation protein HypD 2287730..2288869 Rhodobacter sphaeroides ATCC 17029 4895213 YP_001044036.1 CDS Rsph17029_2161 NC_009049.1 2288920 2289942 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rsp:RSP_0510 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2288920..2289942 Rhodobacter sphaeroides ATCC 17029 4896222 YP_001044037.1 CDS Rsph17029_2162 NC_009049.1 2290010 2290405 D SMART: Rhodanese domain protein; KEGG: rsp:RSP_6117 hypothetical protein containing PspE/rhodanese-related domain; rhodanese domain-containing protein 2290010..2290405 Rhodobacter sphaeroides ATCC 17029 4896134 YP_001044038.1 CDS Rsph17029_2163 NC_009049.1 2290458 2291033 D PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rsp:RSP_0511 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2290458..2291033 Rhodobacter sphaeroides ATCC 17029 4896803 YP_001044039.1 CDS Rsph17029_2164 NC_009049.1 2291247 2294072 D KEGG: rsp:RSP_0512 multisensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 2291247..2294072 Rhodobacter sphaeroides ATCC 17029 4895385 YP_001044040.1 CDS Rsph17029_2165 NC_009049.1 2294076 2295503 R PFAM: glycoside hydrolase, family 16; Hemolysin-type calcium-binding region; KEGG: rsp:RSP_0513 hypothetical protein; glycoside hydrolase complement(2294076..2295503) Rhodobacter sphaeroides ATCC 17029 4895484 YP_001044041.1 CDS Rsph17029_2166 NC_009049.1 2295684 2296697 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0514 dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase complement(2295684..2296697) Rhodobacter sphaeroides ATCC 17029 4895513 YP_001044042.1 CDS Rsph17029_2167 NC_009049.1 2296760 2297836 R KEGG: rsp:RSP_0515 hypothetical protein; hypothetical protein complement(2296760..2297836) Rhodobacter sphaeroides ATCC 17029 4895532 YP_001044043.1 CDS Rsph17029_2168 NC_009049.1 2297833 2298924 R KEGG: rsp:RSP_0516 hypothetical protein; hypothetical protein complement(2297833..2298924) Rhodobacter sphaeroides ATCC 17029 4897663 YP_001044044.1 CDS Rsph17029_2169 NC_009049.1 2298924 2300033 R KEGG: rsp:RSP_0517 hypothetical protein; hypothetical protein complement(2298924..2300033) Rhodobacter sphaeroides ATCC 17029 4897645 YP_001044045.1 CDS Rsph17029_2170 NC_009049.1 2300035 2301135 R PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_0518 putative glycosyltransferase protein; group 1 glycosyl transferase complement(2300035..2301135) Rhodobacter sphaeroides ATCC 17029 4897616 YP_001044046.1 CDS Rsph17029_2171 NC_009049.1 2301132 2303150 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0519 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(2301132..2303150) Rhodobacter sphaeroides ATCC 17029 4897527 YP_001044047.1 CDS Rsph17029_2172 NC_009049.1 2303147 2304253 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KR; KEGG: rsp:RSP_0520 NAD-dependent dehydratase/epimerase; NAD-dependent epimerase/dehydratase complement(2303147..2304253) Rhodobacter sphaeroides ATCC 17029 4897367 YP_001044048.1 CDS Rsph17029_2173 NC_009049.1 2304542 2305489 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0521 putative Zn-containing dehydrogenase; alcohol dehydrogenase 2304542..2305489 Rhodobacter sphaeroides ATCC 17029 4897437 YP_001044049.1 CDS Rsph17029_2174 NC_009049.1 2305480 2306505 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_0522 putative oxidoreductase; oxidoreductase domain-containing protein 2305480..2306505 Rhodobacter sphaeroides ATCC 17029 4897485 YP_001044050.1 CDS Rsph17029_2175 NC_009049.1 2306512 2307300 D PFAM: Ku domain protein; KEGG: rsp:RSP_0523 hypothetical protein; Ku domain-containing protein 2306512..2307300 Rhodobacter sphaeroides ATCC 17029 4895943 YP_001044051.1 CDS Rsph17029_2176 NC_009049.1 2307403 2308206 R PFAM: Ku domain protein; KEGG: rsp:RSP_0524 hypothetical protein; Ku domain-containing protein complement(2307403..2308206) Rhodobacter sphaeroides ATCC 17029 4897311 YP_001044052.1 CDS Rsph17029_2177 NC_009049.1 2308368 2309027 D PFAM: Hly-III family protein; KEGG: rsp:RSP_0525 hypothetical protein; Hly-III family protein 2308368..2309027 Rhodobacter sphaeroides ATCC 17029 4895362 YP_001044053.1 CDS Rsph17029_2178 NC_009049.1 2309037 2309468 D KEGG: rsp:RSP_0526 hypothetical protein; hypothetical protein 2309037..2309468 Rhodobacter sphaeroides ATCC 17029 4896191 YP_001044054.1 CDS Rsph17029_2179 NC_009049.1 2309501 2310805 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_0527 sigma-54, RpoN; RNA polymerase sigma 54 subunit RpoN complement(2309501..2310805) Rhodobacter sphaeroides ATCC 17029 4895952 YP_001044055.1 CDS nifW NC_009049.1 2310906 2311232 R associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage; nitrogenase stabilizing/protective protein complement(2310906..2311232) Rhodobacter sphaeroides ATCC 17029 4895947 YP_001044056.1 CDS Rsph17029_2181 NC_009049.1 2311243 2312418 R TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rsp:RSP_0529 homocitrate synthase; homocitrate synthase complement(2311243..2312418) Rhodobacter sphaeroides ATCC 17029 4896848 YP_001044057.1 CDS Rsph17029_2182 NC_009049.1 2312418 2313584 R PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsp:RSP_0530 cysteine desulfurase; class V aminotransferase complement(2312418..2313584) Rhodobacter sphaeroides ATCC 17029 4896150 YP_001044058.1 CDS Rsph17029_2183 NC_009049.1 2313581 2314321 R PFAM: nitrogen-fixing NifU domain protein; KEGG: rsp:RSP_0531 nitrogen fixation protein; NifU domain-containing protein complement(2313581..2314321) Rhodobacter sphaeroides ATCC 17029 4895946 YP_001044059.1 CDS Rsph17029_2184 NC_009049.1 2314331 2314651 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rsp:RSP_0532 hypothetical protein; iron-sulfur cluster assembly accessory protein complement(2314331..2314651) Rhodobacter sphaeroides ATCC 17029 4896902 YP_001044060.1 CDS Rsph17029_2185 NC_009049.1 2315207 2315746 R PFAM: NifQ family protein; KEGG: rsp:RSP_0533 putative nitrogen fixation protein NifQ; NifQ family protein complement(2315207..2315746) Rhodobacter sphaeroides ATCC 17029 4895979 YP_001044061.1 CDS Rsph17029_2186 NC_009049.1 2315727 2316029 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_0534 putative dimeric ferredoxin (FdIII); 4Fe-4S ferredoxin complement(2315727..2316029) Rhodobacter sphaeroides ATCC 17029 4896372 YP_001044062.1 CDS Rsph17029_2187 NC_009049.1 2316140 2316610 R PFAM: protein of unknown function DUF269; KEGG: rsp:RSP_0535 hypothetical protein; hypothetical protein complement(2316140..2316610) Rhodobacter sphaeroides ATCC 17029 4896806 YP_001044063.1 CDS Rsph17029_2188 NC_009049.1 2316607 2317041 R TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: rsp:RSP_0536 putative nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX complement(2316607..2317041) Rhodobacter sphaeroides ATCC 17029 4896611 YP_001044064.1 CDS Rsph17029_2189 NC_009049.1 2317055 2319886 R in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe; bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN complement(2317055..2319886) Rhodobacter sphaeroides ATCC 17029 4895724 YP_001044065.1 CDS Rsph17029_2190 NC_009049.1 2320133 2321683 R KEGG: rsp:RSP_0539 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit beta complement(2320133..2321683) Rhodobacter sphaeroides ATCC 17029 4895849 YP_001044066.1 CDS Rsph17029_2191 NC_009049.1 2321754 2323235 R KEGG: rsp:RSP_0540 nitrogenase iron-molybdenum protein, alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit alpha complement(2321754..2323235) Rhodobacter sphaeroides ATCC 17029 4895103 YP_001044067.1 CDS nifH NC_009049.1 2323297 2324172 R nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase complement(2323297..2324172) Rhodobacter sphaeroides ATCC 17029 4897320 YP_001044068.1 CDS Rsph17029_2193 NC_009049.1 2324623 2325453 R KEGG: rsp:RSP_0542 hypothetical protein; hypothetical protein complement(2324623..2325453) Rhodobacter sphaeroides ATCC 17029 4895457 YP_001044069.1 CDS Rsph17029_2194 NC_009049.1 2325458 2325673 R PFAM: NifT/FixU family protein; KEGG: rsp:RSP_0543 hypothetical protein; NifT/FixU family protein complement(2325458..2325673) Rhodobacter sphaeroides ATCC 17029 4895224 YP_001044070.1 CDS Rsph17029_2195 NC_009049.1 2325670 2325954 R PFAM: NifZ family protein; KEGG: rsp:RSP_0544 probable NifZ; NifZ family protein complement(2325670..2325954) Rhodobacter sphaeroides ATCC 17029 4895379 YP_001044071.1 CDS Rsph17029_2196 NC_009049.1 2325941 2326708 R PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: rsp:RSP_0545 hypothetical protein; LRV FeS4 cluster domain-containing protein complement(2325941..2326708) Rhodobacter sphaeroides ATCC 17029 4895570 YP_001044072.1 CDS Rsph17029_2197 NC_009049.1 2326915 2328390 R TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM domain protein; KEGG: rsp:RSP_0546 NifB family--FeMo cofactor biosynthesis protein; nitrogenase cofactor biosynthesis protein NifB complement(2326915..2328390) Rhodobacter sphaeroides ATCC 17029 4895691 YP_001044073.1 CDS Rsph17029_2198 NC_009049.1 2328638 2330383 R KEGG: rsp:RSP_0547 NifA transcriptional activator; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; transcriptional regulator NifA complement(2328638..2330383) Rhodobacter sphaeroides ATCC 17029 4895760 YP_001044074.1 CDS Rsph17029_2199 NC_009049.1 2330663 2331058 R PFAM: Rhodanese domain protein; KEGG: rsp:RSP_0548 hypothetical protein; rhodanese domain-containing protein complement(2330663..2331058) Rhodobacter sphaeroides ATCC 17029 4895968 YP_001044075.1 CDS Rsph17029_2200 NC_009049.1 2331371 2332153 D PFAM: Sporulation domain protein; KEGG: rsp:RSP_0549 hypothetical protein; sporulation domain-containing protein 2331371..2332153 Rhodobacter sphaeroides ATCC 17029 4895993 YP_001044076.1 CDS Rsph17029_2201 NC_009049.1 2332171 2333340 D PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rsp:RSP_0550 putative D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 2332171..2333340 Rhodobacter sphaeroides ATCC 17029 4896193 YP_001044077.1 CDS Rsph17029_2202 NC_009049.1 2333353 2334006 D PFAM: thymidylate kinase; KEGG: rsp:RSP_0551 putative thymidylate kinase; dTMP kinase 2333353..2334006 Rhodobacter sphaeroides ATCC 17029 4896311 YP_001044078.1 CDS Rsph17029_2203 NC_009049.1 2334192 2334806 R KEGG: rsp:RSP_6118 hypothetical protein; hypothetical protein complement(2334192..2334806) Rhodobacter sphaeroides ATCC 17029 4896756 YP_001044079.1 CDS Rsph17029_2204 NC_009049.1 2335078 2335419 D PFAM: small multidrug resistance protein; KEGG: rsp:RSP_0552 putative multidrug transporter, SMR family, DMT superfamily; small multidrug resistance protein 2335078..2335419 Rhodobacter sphaeroides ATCC 17029 4896837 YP_001044080.1 CDS ruvB NC_009049.1 2335688 2336713 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2335688..2336713) Rhodobacter sphaeroides ATCC 17029 4897079 YP_001044081.1 CDS Rsph17029_2206 NC_009049.1 2336778 2337680 R putative metalloprotease; heat shock protein HtpX complement(2336778..2337680) Rhodobacter sphaeroides ATCC 17029 4897202 YP_001044082.1 CDS ruvA NC_009049.1 2337785 2338459 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(2337785..2338459) Rhodobacter sphaeroides ATCC 17029 4897718 YP_001044083.1 CDS ruvC NC_009049.1 2338456 2338962 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(2338456..2338962) Rhodobacter sphaeroides ATCC 17029 4895237 YP_001044084.1 CDS Rsph17029_2209 NC_009049.1 2339282 2339494 D PFAM: protein of unknown function DUF1127; KEGG: rsp:RSP_0557 hypothetical protein; hypothetical protein 2339282..2339494 Rhodobacter sphaeroides ATCC 17029 4895319 YP_001044085.1 CDS Rsph17029_2210 NC_009049.1 2339846 2340721 R PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: rsp:RSP_0558 possible ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase complement(2339846..2340721) Rhodobacter sphaeroides ATCC 17029 4895464 YP_001044086.1 CDS Rsph17029_2211 NC_009049.1 2340785 2341459 R KEGG: rsp:RSP_0559 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(2340785..2341459) Rhodobacter sphaeroides ATCC 17029 4896742 YP_001044087.1 CDS Rsph17029_2212 NC_009049.1 2341679 2343871 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(2341679..2343871) Rhodobacter sphaeroides ATCC 17029 4896782 YP_001044088.1 CDS Rsph17029_2213 NC_009049.1 2343966 2344625 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 2343966..2344625 Rhodobacter sphaeroides ATCC 17029 4896151 YP_001044089.1 CDS Rsph17029_2214 NC_009049.1 2344648 2345337 D KEGG: rsp:RSP_0562 hypothetical protein; hypothetical protein 2344648..2345337 Rhodobacter sphaeroides ATCC 17029 4896001 YP_001044090.1 CDS xerC NC_009049.1 2345334 2346254 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 2345334..2346254 Rhodobacter sphaeroides ATCC 17029 4896604 YP_001044091.1 CDS Rsph17029_2216 NC_009049.1 2346363 2347082 D KEGG: rsp:RSP_0564 hypothetical protein; hypothetical protein 2346363..2347082 Rhodobacter sphaeroides ATCC 17029 4895990 YP_001044092.1 CDS Rsph17029_2217 NC_009049.1 2347178 2347894 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0565 putative phosphatidylcholine synthase; phosphatidylcholine synthase 2347178..2347894 Rhodobacter sphaeroides ATCC 17029 4896348 YP_001044093.1 CDS Rsph17029_2218 NC_009049.1 2347902 2348738 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0566 possible transporter, DMT superfamily; hypothetical protein complement(2347902..2348738) Rhodobacter sphaeroides ATCC 17029 4896067 YP_001044094.1 CDS Rsph17029_2219 NC_009049.1 2348802 2349245 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rsp:RSP_0567 probable methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(2348802..2349245) Rhodobacter sphaeroides ATCC 17029 4896657 YP_001044095.1 CDS Rsph17029_2220 NC_009049.1 2349242 2349487 R KEGG: rsp:RSP_6119 hypothetical protein; hypothetical protein complement(2349242..2349487) Rhodobacter sphaeroides ATCC 17029 4895455 YP_001044096.1 CDS ileS NC_009049.1 2349471 2352425 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(2349471..2352425) Rhodobacter sphaeroides ATCC 17029 4896881 YP_001044097.1 CDS Rsph17029_2222 NC_009049.1 2352621 2353676 R PFAM: conserved hypothetical protein 1620; KEGG: rsp:RSP_0569 hypothetical protein; hypothetical protein complement(2352621..2353676) Rhodobacter sphaeroides ATCC 17029 4897121 YP_001044098.1 CDS Rsph17029_2223 NC_009049.1 2353777 2355207 R PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: rsp:RSP_0570 hypothetical protein; hypothetical protein complement(2353777..2355207) Rhodobacter sphaeroides ATCC 17029 4897123 YP_001044099.1 CDS truA NC_009049.1 2355434 2356201 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2355434..2356201 Rhodobacter sphaeroides ATCC 17029 4897572 YP_001044100.1 CDS Rsph17029_2225 NC_009049.1 2356414 2358501 R KEGG: rsp:RSP_0572 putative exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon complement(2356414..2358501) Rhodobacter sphaeroides ATCC 17029 4896431 YP_001044101.1 CDS Rsph17029_2226 NC_009049.1 2358505 2358894 R PFAM: response regulator receiver; KEGG: rsp:RSP_0573 response regulator receiver protein; response regulator receiver protein complement(2358505..2358894) Rhodobacter sphaeroides ATCC 17029 4897493 YP_001044102.1 CDS Rsph17029_2227 NC_009049.1 2358896 2359417 R KEGG: rsp:RSP_0574 hypothetical protein; hypothetical protein complement(2358896..2359417) Rhodobacter sphaeroides ATCC 17029 4897658 YP_001044103.1 CDS Rsph17029_2228 NC_009049.1 2359428 2361248 R PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: rsp:RSP_0575 predicted signal transduction protein containing cyclic nucleotide-binding and CBS domains; cyclic nucleotide-binding protein complement(2359428..2361248) Rhodobacter sphaeroides ATCC 17029 4897447 YP_001044104.1 CDS Rsph17029_2229 NC_009049.1 2361312 2363129 R PFAM: Na+/solute symporter; KEGG: rsp:RSP_0576 Na+/solute symporter; Na+/solute symporter complement(2361312..2363129) Rhodobacter sphaeroides ATCC 17029 4895649 YP_001044105.1 CDS Rsph17029_2230 NC_009049.1 2363145 2363426 R KEGG: rsp:RSP_0577 hypothetical protein; hypothetical protein complement(2363145..2363426) Rhodobacter sphaeroides ATCC 17029 4898085 YP_001044106.1 CDS Rsph17029_2231 NC_009049.1 2363493 2364182 R TIGRFAM: adenylate kinases; PFAM: adenylate kinase; adenylate kinase, lid domain protein; KEGG: rsp:RSP_0578 adenylate kinase; adenylate kinase complement(2363493..2364182) Rhodobacter sphaeroides ATCC 17029 4896511 YP_001044107.1 CDS Rsph17029_2232 NC_009049.1 2364186 2366147 R TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_0579 acetyl-coenzyme A synthetase; acetate--CoA ligase complement(2364186..2366147) Rhodobacter sphaeroides ATCC 17029 4897712 YP_001044108.1 CDS Rsph17029_2233 NC_009049.1 2366500 2368137 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rsp:RSP_0580 putative sulfate transporter, SulP family; sulfate transporter complement(2366500..2368137) Rhodobacter sphaeroides ATCC 17029 4897832 YP_001044109.1 CDS Rsph17029_2234 NC_009049.1 2368210 2368704 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rsp:RSP_0581 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2368210..2368704 Rhodobacter sphaeroides ATCC 17029 4897847 YP_001044110.1 CDS Rsph17029_2235 NC_009049.1 2368855 2370312 D TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: rsp:RSP_0582 possible penicillin binding protein; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2368855..2370312 Rhodobacter sphaeroides ATCC 17029 4897801 YP_001044111.1 CDS Rsph17029_2236 NC_009049.1 2370472 2370894 R KEGG: rsp:RSP_0583 hypothetical protein; hypothetical protein complement(2370472..2370894) Rhodobacter sphaeroides ATCC 17029 4897869 YP_001044112.1 CDS lysK NC_009049.1 2371153 2372733 D class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 2371153..2372733 Rhodobacter sphaeroides ATCC 17029 4897948 YP_001044113.1 CDS Rsph17029_2238 NC_009049.1 2373192 2373614 D PFAM: OsmC family protein; KEGG: rsp:RSP_0585 osmotically inducible protein OsmC; OsmC family protein 2373192..2373614 Rhodobacter sphaeroides ATCC 17029 4897717 YP_001044114.1 CDS nadD NC_009049.1 2373942 2374520 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(2373942..2374520) Rhodobacter sphaeroides ATCC 17029 4896577 YP_001044115.1 CDS Rsph17029_2240 NC_009049.1 2374701 2376356 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2374701..2376356 Rhodobacter sphaeroides ATCC 17029 4897298 YP_001044116.1 CDS Rsph17029_2241 NC_009049.1 2376353 2376712 D KEGG: rsp:RSP_0588 hypothetical protein; hypothetical protein 2376353..2376712 Rhodobacter sphaeroides ATCC 17029 4896434 YP_001044117.1 CDS Rsph17029_2242 NC_009049.1 2376842 2377045 R KEGG: rsp:RSP_0589 hypothetical protein; hypothetical protein complement(2376842..2377045) Rhodobacter sphaeroides ATCC 17029 4896328 YP_001044118.1 CDS Rsph17029_2243 NC_009049.1 2377190 2377342 D KEGG: rsp:RSP_6120 hypothetical protein; hypothetical protein 2377190..2377342 Rhodobacter sphaeroides ATCC 17029 4897416 YP_001044119.1 CDS Rsph17029_2244 NC_009049.1 2377433 2377723 R KEGG: rsp:RSP_0590 hypothetical protein; hypothetical protein complement(2377433..2377723) Rhodobacter sphaeroides ATCC 17029 4896809 YP_001044120.1 CDS Rsph17029_2245 NC_009049.1 2377974 2378180 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rsp:RSP_0591 cold-shock protein; cold-shock DNA-binding domain-containing protein 2377974..2378180 Rhodobacter sphaeroides ATCC 17029 4896255 YP_001044121.1 CDS Rsph17029_2246 NC_009049.1 2378304 2379242 D PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rsp:RSP_0592 putative lipase/esterase; alpha/beta hydrolase domain-containing protein 2378304..2379242 Rhodobacter sphaeroides ATCC 17029 4897525 YP_001044122.1 CDS Rsph17029_2247 NC_009049.1 2379336 2380841 D PFAM: sulfatase; KEGG: rsp:RSP_0594 putative choline sulfatase; sulfatase 2379336..2380841 Rhodobacter sphaeroides ATCC 17029 4897353 YP_001044123.1 CDS Rsph17029_2248 NC_009049.1 2380924 2381439 R PFAM: Lipocalin family protein; KEGG: rsp:RSP_0595 putative outer membrane lipoprotein Blc; lipocalin family protein complement(2380924..2381439) Rhodobacter sphaeroides ATCC 17029 4897304 YP_001044124.1 CDS Rsph17029_2249 NC_009049.1 2381523 2383541 R PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rsp:RSP_0596 putative peptidyl-dipeptidase; peptidyl-dipeptidase Dcp complement(2381523..2383541) Rhodobacter sphaeroides ATCC 17029 4896399 YP_001044125.1 CDS Rsph17029_2250 NC_009049.1 2383628 2384674 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rsp:RSP_0597 probable molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD binding protein complement(2383628..2384674) Rhodobacter sphaeroides ATCC 17029 4896738 YP_001044126.1 CDS dut NC_009049.1 2384674 2385141 R catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(2384674..2385141) Rhodobacter sphaeroides ATCC 17029 4895062 YP_001044127.1 CDS Rsph17029_2252 NC_009049.1 2385247 2386437 R catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(2385247..2386437) Rhodobacter sphaeroides ATCC 17029 4896453 YP_001044128.1 CDS Rsph17029_2253 NC_009049.1 2386500 2387327 R KEGG: rsp:RSP_0600 hypothetical protein; hypothetical protein complement(2386500..2387327) Rhodobacter sphaeroides ATCC 17029 4897659 YP_001044129.1 CDS rpoH2 NC_009049.1 2387324 2388202 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 complement(2387324..2388202) Rhodobacter sphaeroides ATCC 17029 4896822 YP_001044130.1 CDS Rsph17029_2255 NC_009049.1 2388257 2388811 D PFAM: cobalbumin biosynthesis enzyme; KEGG: rsp:RSP_0602 possible adenosyl cobinamide kinase/cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase 2388257..2388811 Rhodobacter sphaeroides ATCC 17029 4897165 YP_001044131.1 CDS Rsph17029_2256 NC_009049.1 2388808 2389386 D PFAM: Phosphoglycerate mutase; KEGG: rsp:RSP_0603 hypothetical protein; phosphoglycerate mutase 2388808..2389386 Rhodobacter sphaeroides ATCC 17029 4897333 YP_001044132.1 CDS Rsph17029_2257 NC_009049.1 2389681 2390772 R PFAM: phage integrase family protein; KEGG: mag:amb3645 integrase; phage integrase family protein complement(2389681..2390772) Rhodobacter sphaeroides ATCC 17029 4897407 YP_001044133.1 CDS Rsph17029_2258 NC_009049.1 2390917 2392740 R PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_2079 hypothetical protein; nuclease complement(2390917..2392740) Rhodobacter sphaeroides ATCC 17029 4896909 YP_001044134.1 CDS Rsph17029_2259 NC_009049.1 2392864 2393130 R KEGG: rsp:RSP_3610 hypothetical protein; hypothetical protein complement(2392864..2393130) Rhodobacter sphaeroides ATCC 17029 4897207 YP_001044135.1 CDS Rsph17029_2260 NC_009049.1 2393358 2393474 D KEGG: rsp:RSP_1651 hypothetical protein; hypothetical protein 2393358..2393474 Rhodobacter sphaeroides ATCC 17029 4896300 YP_001044136.1 CDS Rsph17029_2261 NC_009049.1 2393461 2393856 D KEGG: rsp:RSP_1650 hypothetical protein; hypothetical protein 2393461..2393856 Rhodobacter sphaeroides ATCC 17029 4897231 YP_001044137.1 CDS Rsph17029_2262 NC_009049.1 2393978 2395024 D PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 2393978..2395024 Rhodobacter sphaeroides ATCC 17029 4897706 YP_001044138.1 CDS Rsph17029_2263 NC_009049.1 2395075 2396022 D KEGG: bur:Bcep18194_B1501 alpha/beta hydrolase; alpha/beta hydrolase 2395075..2396022 Rhodobacter sphaeroides ATCC 17029 4896821 YP_001044139.1 CDS Rsph17029_2265 NC_009049.1 2397201 2397794 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rsp:RSP_0615 putative oxidoreductase; alcohol dehydrogenase 2397201..2397794 Rhodobacter sphaeroides ATCC 17029 4897356 YP_001044140.1 CDS Rsph17029_2266 NC_009049.1 2398566 2402243 R TIGRFAM: pentatricopeptide repeat containing protein; KEGG: osa:4331201 Os02g0824000; pentapeptide repeat-containing protein complement(2398566..2402243) Rhodobacter sphaeroides ATCC 17029 4897368 YP_001044141.1 CDS Rsph17029_2267 NC_009049.1 2402962 2403594 D PFAM: phage integrase family protein; KEGG: sit:TM1040_3118 phage integrase; phage integrase family protein 2402962..2403594 Rhodobacter sphaeroides ATCC 17029 4895939 YP_001044142.1 CDS Rsph17029_2268 NC_009049.1 2403681 2404286 D PFAM: helix-turn-helix domain protein; plasmid stabilization system; KEGG: sme:SMc00089 hypothetical protein; XRE family transcriptional regulator 2403681..2404286 Rhodobacter sphaeroides ATCC 17029 4895230 YP_001044143.1 CDS Rsph17029_2269 NC_009049.1 2404563 2405036 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_0606 putative redox protein; alkylhydroperoxidase 2404563..2405036 Rhodobacter sphaeroides ATCC 17029 4895244 YP_001044144.1 CDS Rsph17029_2270 NC_009049.1 2405026 2405886 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 2405026..2405886 Rhodobacter sphaeroides ATCC 17029 4896936 YP_001044145.1 CDS Rsph17029_2271 NC_009049.1 2406211 2406759 R KEGG: sma:SAV1564 putative ABC transporter ATP-binding protein; ABC-type multidrug transport system ATPase and permease components-like complement(2406211..2406759) Rhodobacter sphaeroides ATCC 17029 4896079 YP_001044146.1 CDS Rsph17029_2272 NC_009049.1 2406765 2407847 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpe:RPE_3323 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2406765..2407847) Rhodobacter sphaeroides ATCC 17029 4895273 YP_001044147.1 CDS Rsph17029_2273 NC_009049.1 2407837 2408301 R PFAM: transcriptional regulator domain protein; KEGG: rpe:RPE_3324 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(2407837..2408301) Rhodobacter sphaeroides ATCC 17029 4896175 YP_001044148.1 CDS Rsph17029_2274 NC_009049.1 2408365 2408754 D KEGG: rsp:RSP_0621 possible DNA helicase; putative DNA helicase 2408365..2408754 Rhodobacter sphaeroides ATCC 17029 4895262 YP_001044149.1 CDS Rsph17029_2275 NC_009049.1 2408955 2409137 R PFAM: protein of unknown function DUF329; KEGG: rsp:RSP_0623 hypothetical protein; hypothetical protein complement(2408955..2409137) Rhodobacter sphaeroides ATCC 17029 4897664 YP_001044150.1 CDS Rsph17029_2276 NC_009049.1 2409134 2410177 R KEGG: rsp:RSP_0624 ribonuclease; ribonuclease complement(2409134..2410177) Rhodobacter sphaeroides ATCC 17029 4895321 YP_001044151.1 CDS Rsph17029_2277 NC_009049.1 2410174 2410752 R TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rsp:RSP_0625 putative Maf-like protein; maf protein complement(2410174..2410752) Rhodobacter sphaeroides ATCC 17029 4895297 YP_001044152.1 CDS infA NC_009049.1 2410753 2410971 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2410753..2410971) Rhodobacter sphaeroides ATCC 17029 4897155 YP_001044153.1 CDS Rsph17029_2279 NC_009049.1 2411146 2412021 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_0627 putative amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2411146..2412021) Rhodobacter sphaeroides ATCC 17029 4895318 YP_001044154.1 CDS Rsph17029_2280 NC_009049.1 2412041 2412628 R KEGG: rsp:RSP_0628 hypothetical protein; hypothetical protein complement(2412041..2412628) Rhodobacter sphaeroides ATCC 17029 4895332 YP_001044155.1 CDS Rsph17029_2281 NC_009049.1 2412625 2413029 R PFAM: protein of unknown function DUF1486; KEGG: rsp:RSP_0629 hypothetical protein; hypothetical protein complement(2412625..2413029) Rhodobacter sphaeroides ATCC 17029 4895536 YP_001044156.1 CDS Rsph17029_2282 NC_009049.1 2413013 2413498 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsp:RSP_0630 hypothetical protein; protein tyrosine phosphatase complement(2413013..2413498) Rhodobacter sphaeroides ATCC 17029 4895576 YP_001044157.1 CDS Rsph17029_2283 NC_009049.1 2413501 2413977 R PFAM: Uncharacterised conserved protein UCP032146; KEGG: rsp:RSP_0631 hypothetical protein; hypothetical protein complement(2413501..2413977) Rhodobacter sphaeroides ATCC 17029 4896827 YP_001044158.1 CDS hisD NC_009049.1 2413981 2415285 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2413981..2415285) Rhodobacter sphaeroides ATCC 17029 4895413 YP_001044159.1 CDS Rsph17029_2285 NC_009049.1 2415507 2415986 R KEGG: rsp:RSP_6122 hypothetical protein; hypothetical protein complement(2415507..2415986) Rhodobacter sphaeroides ATCC 17029 4895399 YP_001044160.1 CDS Rsph17029_2286 NC_009049.1 2415986 2417254 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2415986..2417254) Rhodobacter sphaeroides ATCC 17029 4897904 YP_001044161.1 CDS Rsph17029_2287 NC_009049.1 2418057 2419364 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0634 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP dicarboxylate transporter subunit DctM complement(2418057..2419364) Rhodobacter sphaeroides ATCC 17029 4897782 YP_001044162.1 CDS Rsph17029_2288 NC_009049.1 2419374 2419892 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0635 TRAP-T family transporter, DctQ (4 TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ complement(2419374..2419892) Rhodobacter sphaeroides ATCC 17029 4897715 YP_001044163.1 CDS Rsph17029_2289 NC_009049.1 2419951 2421075 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0636 TRAP-T family transporter, DctP (periplasmic binding) subunit; TRAP dicarboxylate transporter- DctP subunit complement(2419951..2421075) Rhodobacter sphaeroides ATCC 17029 4895486 YP_001044164.1 CDS Rsph17029_2290 NC_009049.1 2421162 2421887 R PFAM: protein of unknown function DUF861, cupin_3; KEGG: rsp:RSP_0637 hypothetical protein; hypothetical protein complement(2421162..2421887) Rhodobacter sphaeroides ATCC 17029 4895489 YP_001044165.1 CDS Rsph17029_2291 NC_009049.1 2421884 2423176 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0638 putative FAD dependent oxidoreductase protein; FAD dependent oxidoreductase complement(2421884..2423176) Rhodobacter sphaeroides ATCC 17029 4895520 YP_001044166.1 CDS Rsph17029_2292 NC_009049.1 2423178 2424854 R PFAM: Hydantoinase B/oxoprolinase; KEGG: rsp:RSP_0639 putative N-methylhydantoinase B; 5-oxoprolinase complement(2423178..2424854) Rhodobacter sphaeroides ATCC 17029 4895552 YP_001044167.1 CDS Rsph17029_2293 NC_009049.1 2424858 2426876 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rsp:RSP_0640 putative N-methylhydantoinase A; 5-oxoprolinase complement(2424858..2426876) Rhodobacter sphaeroides ATCC 17029 4897721 YP_001044168.1 CDS Rsph17029_2294 NC_009049.1 2427116 2427751 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_0641 transcriptional regulator, XRE family; XRE family transcriptional regulator 2427116..2427751 Rhodobacter sphaeroides ATCC 17029 4895598 YP_001044169.1 CDS Rsph17029_2295 NC_009049.1 2427758 2428702 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0642 possible transporter, RhaT family, DMT superfamily; hypothetical protein 2427758..2428702 Rhodobacter sphaeroides ATCC 17029 4897918 YP_001044170.1 CDS Rsph17029_2296 NC_009049.1 2429232 2430857 D PFAM: ATP-binding region, ATPase domain protein domain protein; MASE1 domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_0643 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 2429232..2430857 Rhodobacter sphaeroides ATCC 17029 4895816 YP_001044171.1 CDS Rsph17029_2297 NC_009049.1 2430861 2431577 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0644 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2430861..2431577) Rhodobacter sphaeroides ATCC 17029 4895670 YP_001044172.1 CDS Rsph17029_2298 NC_009049.1 2431574 2432254 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0645 ABC transporter, ATPase subunit; ABC transporter complement(2431574..2432254) Rhodobacter sphaeroides ATCC 17029 4895471 YP_001044173.1 CDS Rsph17029_2299 NC_009049.1 2432254 2433189 R KEGG: rsp:RSP_0646 ABC transporter, substrate-binding protein; ABC transporter substrate-binding protein complement(2432254..2433189) Rhodobacter sphaeroides ATCC 17029 4895983 YP_001044174.1 CDS Rsph17029_2300 NC_009049.1 2433186 2433989 R KEGG: rsp:RSP_0647 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(2433186..2433989) Rhodobacter sphaeroides ATCC 17029 4895804 YP_001044175.1 CDS Rsph17029_2301 NC_009049.1 2433986 2434597 R KEGG: rsp:RSP_0648 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(2433986..2434597) Rhodobacter sphaeroides ATCC 17029 4896628 YP_001044176.1 CDS Rsph17029_2302 NC_009049.1 2434594 2435382 R PFAM: hydroxyethylthiazole kinase; KEGG: rsp:RSP_0649 putative hydoxyethylthiazole kinase; hydroxyethylthiazole kinase complement(2434594..2435382) Rhodobacter sphaeroides ATCC 17029 4895846 YP_001044177.1 CDS Rsph17029_2303 NC_009049.1 2435760 2436212 R PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_0650 probable transglycosylase; lytic transglycosylase, catalytic complement(2435760..2436212) Rhodobacter sphaeroides ATCC 17029 4896353 YP_001044178.1 CDS Rsph17029_2304 NC_009049.1 2436209 2437003 R PFAM: inositol monophosphatase; KEGG: rsp:RSP_0651 putative inositol monophosphatase protein; inositol-phosphate phosphatase complement(2436209..2437003) Rhodobacter sphaeroides ATCC 17029 4895903 YP_001044179.1 CDS Rsph17029_2305 NC_009049.1 2437014 2438000 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_0652 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(2437014..2438000) Rhodobacter sphaeroides ATCC 17029 4895737 YP_001044180.1 CDS Rsph17029_2306 NC_009049.1 2438010 2439314 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rsp:RSP_0653 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(2438010..2439314) Rhodobacter sphaeroides ATCC 17029 4895951 YP_001044181.1 CDS Rsph17029_2307 NC_009049.1 2439382 2440293 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0654 possible transporter, DMT superfamily; hypothetical protein complement(2439382..2440293) Rhodobacter sphaeroides ATCC 17029 4895940 YP_001044182.1 CDS Rsph17029_2308 NC_009049.1 2440470 2441216 R PFAM: protein of unknown function DUF28; KEGG: rsp:RSP_0655 hypothetical protein; hypothetical protein complement(2440470..2441216) Rhodobacter sphaeroides ATCC 17029 4897940 YP_001044183.1 CDS Rsph17029_2309 NC_009049.1 2441311 2443089 R PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rsp:RSP_0656 probable sodium/sulphate symporter; TrkA domain-containing protein complement(2441311..2443089) Rhodobacter sphaeroides ATCC 17029 4895954 YP_001044184.1 CDS Rsph17029_2310 NC_009049.1 2443202 2444047 R PFAM: metallophosphoesterase; KEGG: rsp:RSP_0657 hypothetical protein; metallophosphoesterase complement(2443202..2444047) Rhodobacter sphaeroides ATCC 17029 4895969 YP_001044185.1 CDS Rsph17029_2311 NC_009049.1 2444096 2446495 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_0658 probable ATP-dependent helicase; DEAD/DEAH box helicase 2444096..2446495 Rhodobacter sphaeroides ATCC 17029 4895977 YP_001044186.1 CDS Rsph17029_2312 NC_009049.1 2446601 2447287 D PFAM: metallophosphoesterase; KEGG: rsp:RSP_0659 putative metallo-phosphoesterase; metallophosphoesterase 2446601..2447287 Rhodobacter sphaeroides ATCC 17029 4895962 YP_001044187.1 CDS Rsph17029_2313 NC_009049.1 2447251 2447970 R PFAM: LytTr DNA-binding region; KEGG: rsp:RSP_0660 hypothetical protein; response regulator receiver protein complement(2447251..2447970) Rhodobacter sphaeroides ATCC 17029 4897413 YP_001044188.1 CDS Rsph17029_2314 NC_009049.1 2448085 2448975 R catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(2448085..2448975) Rhodobacter sphaeroides ATCC 17029 4896056 YP_001044189.1 CDS Rsph17029_2315 NC_009049.1 2448972 2449289 R PFAM: Chorismate mutase; KEGG: rsp:RSP_0662 putative chorismate mutase; chorismate mutase complement(2448972..2449289) Rhodobacter sphaeroides ATCC 17029 4897327 YP_001044190.1 CDS Rsph17029_2316 NC_009049.1 2449364 2451037 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(2449364..2451037) Rhodobacter sphaeroides ATCC 17029 4895996 YP_001044191.1 CDS Rsph17029_2317 NC_009049.1 2451118 2451810 R KEGG: rsp:RSP_0664 hypothetical protein; hypothetical protein complement(2451118..2451810) Rhodobacter sphaeroides ATCC 17029 4897950 YP_001044192.1 CDS Rsph17029_2318 NC_009049.1 2452315 2454216 R KEGG: rsp:RSP_0665 FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(2452315..2454216) Rhodobacter sphaeroides ATCC 17029 4895581 YP_001044193.1 CDS Rsph17029_2319 NC_009049.1 2454295 2455533 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; KEGG: rsp:RSP_0666 probable cell cycle protein; tRNA(Ile)-lysidine synthetase complement(2454295..2455533) Rhodobacter sphaeroides ATCC 17029 4897053 YP_001044194.1 CDS Rsph17029_2320 NC_009049.1 2455533 2456357 R KEGG: rsp:RSP_0667 hypothetical protein; hypothetical protein complement(2455533..2456357) Rhodobacter sphaeroides ATCC 17029 4896145 YP_001044195.1 CDS Rsph17029_2321 NC_009049.1 2456362 2456910 R TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0668 OmpA/MotB family protein; OmpA domain-containing protein complement(2456362..2456910) Rhodobacter sphaeroides ATCC 17029 4897874 YP_001044196.1 CDS tolB NC_009049.1 2456995 2458329 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(2456995..2458329) Rhodobacter sphaeroides ATCC 17029 4897505 YP_001044197.1 CDS Rsph17029_2323 NC_009049.1 2458399 2459643 R KEGG: rsp:RSP_0670 possible TolA protein; hypothetical protein complement(2458399..2459643) Rhodobacter sphaeroides ATCC 17029 4896239 YP_001044198.1 CDS Rsph17029_2324 NC_009049.1 2459654 2460124 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rsp:RSP_0671 ExbD/TolR family protein; biopolymer transport protein ExbD/TolR complement(2459654..2460124) Rhodobacter sphaeroides ATCC 17029 4895651 YP_001044199.1 CDS Rsph17029_2325 NC_009049.1 2460128 2460826 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0672 biopolymer transport protein, TolQ; MotA/TolQ/ExbB proton channel complement(2460128..2460826) Rhodobacter sphaeroides ATCC 17029 4896252 YP_001044200.1 CDS Rsph17029_2326 NC_009049.1 2460953 2461351 R TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_0673 putative thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(2460953..2461351) Rhodobacter sphaeroides ATCC 17029 4896291 YP_001044201.1 CDS Rsph17029_2327 NC_009049.1 2461619 2461912 D KEGG: rsp:RSP_6124 hypothetical protein; hypothetical protein 2461619..2461912 Rhodobacter sphaeroides ATCC 17029 4897767 YP_001044202.1 CDS Rsph17029_2328 NC_009049.1 2462323 2463435 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2462323..2463435 Rhodobacter sphaeroides ATCC 17029 4897361 YP_001044203.1 CDS Rsph17029_2329 NC_009049.1 2463447 2464244 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rsp:RSP_0675 putative TatD-related deoxyribonuclease; TatD family hydrolase 2463447..2464244 Rhodobacter sphaeroides ATCC 17029 4896334 YP_001044204.1 CDS Rsph17029_2330 NC_009049.1 2464244 2465041 D KEGG: rsp:RSP_0676 PhnP-like protein; PhnP-like protein 2464244..2465041 Rhodobacter sphaeroides ATCC 17029 4896325 YP_001044205.1 CDS Rsph17029_2331 NC_009049.1 2465038 2465976 D PFAM: Auxin Efflux Carrier; KEGG: rsp:RSP_0677 putative malonate transporter, MdcF, AEC family; auxin efflux carrier 2465038..2465976 Rhodobacter sphaeroides ATCC 17029 4896323 YP_001044206.1 CDS Rsph17029_2332 NC_009049.1 2465961 2468708 R KEGG: rsp:RSP_0678 hypothetical protein; hypothetical protein complement(2465961..2468708) Rhodobacter sphaeroides ATCC 17029 4896878 YP_001044207.1 CDS Rsph17029_2333 NC_009049.1 2469139 2469894 R KEGG: rsp:RSP_6125 hypothetical protein; Mn2+-dependent serine/threonine protein kinase complement(2469139..2469894) Rhodobacter sphaeroides ATCC 17029 4896406 YP_001044208.1 CDS hemC NC_009049.1 2470072 2471040 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2470072..2471040) Rhodobacter sphaeroides ATCC 17029 4896430 YP_001044209.1 CDS hemE NC_009049.1 2471118 2472149 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2471118..2472149 Rhodobacter sphaeroides ATCC 17029 4896506 YP_001044210.1 CDS Rsph17029_2336 NC_009049.1 2472249 2472875 D KEGG: rsp:RSP_0681 hypothetical protein; hypothetical protein 2472249..2472875 Rhodobacter sphaeroides ATCC 17029 4895883 YP_001044211.1 CDS Rsph17029_2337 NC_009049.1 2473016 2473891 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(2473016..2473891) Rhodobacter sphaeroides ATCC 17029 4896938 YP_001044212.1 CDS Rsph17029_2338 NC_009049.1 2474008 2474421 D KEGG: rsp:RSP_0683 hypothetical protein; hypothetical protein 2474008..2474421 Rhodobacter sphaeroides ATCC 17029 4896680 YP_001044213.1 CDS Rsph17029_2339 NC_009049.1 2474440 2475249 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0684 possible oxidoreductase; short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2474440..2475249) Rhodobacter sphaeroides ATCC 17029 4896700 YP_001044214.1 CDS Rsph17029_2340 NC_009049.1 2475262 2476263 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0685 possible ribosomal RNA small subunit methyltransferase C RsmC; methyltransferase small complement(2475262..2476263) Rhodobacter sphaeroides ATCC 17029 4896698 YP_001044215.1 CDS Rsph17029_2341 NC_009049.1 2476280 2476600 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rsp:RSP_0686 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2476280..2476600) Rhodobacter sphaeroides ATCC 17029 4896760 YP_001044216.1 CDS Rsph17029_2342 NC_009049.1 2476772 2477485 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0687 predicted hydrolase (haloacid dehalogenase (HAD) superfamily); hydrolase 2476772..2477485 Rhodobacter sphaeroides ATCC 17029 4896790 YP_001044217.1 CDS Rsph17029_2343 NC_009049.1 2477665 2479089 D PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rsp:RSP_0688 probable penicillin-binding protein; serine-type D-Ala-D-Ala carboxypeptidase 2477665..2479089 Rhodobacter sphaeroides ATCC 17029 4897168 YP_001044218.1 CDS Rsph17029_2344 NC_009049.1 2479197 2479355 R TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rsp:RSP_0689 RdxS, cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(2479197..2479355) Rhodobacter sphaeroides ATCC 17029 4897118 YP_001044219.1 CDS Rsph17029_2345 NC_009049.1 2479355 2481568 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_0690 copper-translocating P-type ATPase, RdxI; heavy metal translocating P-type ATPase complement(2479355..2481568) Rhodobacter sphaeroides ATCC 17029 4896854 YP_001044220.1 CDS Rsph17029_2346 NC_009049.1 2481572 2482030 R PFAM: FixH family protein; KEGG: rsp:RSP_0691 RdxH; FixH family protein complement(2481572..2482030) Rhodobacter sphaeroides ATCC 17029 4896828 YP_001044221.1 CDS Rsph17029_2347 NC_009049.1 2482032 2483465 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_0692 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin complement(2482032..2483465) Rhodobacter sphaeroides ATCC 17029 4896538 YP_001044222.1 CDS Rsph17029_2348 NC_009049.1 2483700 2484572 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: rsp:RSP_0693 Cbb3-type cytochrome c oxidase CcoP subunit; cytochrome c oxidase, cbb3-type subunit III complement(2483700..2484572) Rhodobacter sphaeroides ATCC 17029 4896895 YP_001044223.1 CDS Rsph17029_2349 NC_009049.1 2484569 2484772 R PFAM: Cbb3-type cytochrome oxidase component; KEGG: rsp:RSP_0694 Cbb3-type cytochrome c oxidase CcoQ subunit; cbb3-type cytochrome oxidase subunit complement(2484569..2484772) Rhodobacter sphaeroides ATCC 17029 4896932 YP_001044224.1 CDS Rsph17029_2350 NC_009049.1 2484785 2485510 R CcoO; FixO; cbb3-type cytochrome c oxidase subunit II complement(2484785..2485510) Rhodobacter sphaeroides ATCC 17029 4896724 YP_001044225.1 CDS Rsph17029_2351 NC_009049.1 2485527 2487134 R CcoN; FixN; cbb3-type cytochrome c oxidase subunit I complement(2485527..2487134) Rhodobacter sphaeroides ATCC 17029 4896949 YP_001044226.1 CDS Rsph17029_2352 NC_009049.1 2487330 2488178 D PFAM: UspA domain protein; KEGG: rsp:RSP_0697 universal stress protein (Usp); UspA domain-containing protein 2487330..2488178 Rhodobacter sphaeroides ATCC 17029 4896978 YP_001044227.1 CDS Rsph17029_2353 NC_009049.1 2488258 2489004 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rsp:RSP_0698 Crp-Fnr regulatory protein (FnrL); CRP/FNR family transcriptional regulator complement(2488258..2489004) Rhodobacter sphaeroides ATCC 17029 4897928 YP_001044228.1 CDS Rsph17029_2354 NC_009049.1 2489067 2490419 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2489067..2490419 Rhodobacter sphaeroides ATCC 17029 4897966 YP_001044229.1 CDS Rsph17029_2355 NC_009049.1 2490430 2491653 R PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_0700 probable glycosyltransferase; group 1 glycosyl transferase complement(2490430..2491653) Rhodobacter sphaeroides ATCC 17029 4895141 YP_001044230.1 CDS Rsph17029_2356 NC_009049.1 2491659 2493290 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_0701 ABC peptide transporter, fused ATPase domains; ABC transporter complement(2491659..2493290) Rhodobacter sphaeroides ATCC 17029 4897051 YP_001044231.1 CDS Rsph17029_2357 NC_009049.1 2493287 2494393 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0702 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2493287..2494393) Rhodobacter sphaeroides ATCC 17029 4897049 YP_001044232.1 CDS Rsph17029_2358 NC_009049.1 2494395 2495483 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0703 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2494395..2495483) Rhodobacter sphaeroides ATCC 17029 4897042 YP_001044233.1 CDS Rsph17029_2359 NC_009049.1 2495499 2497436 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_0704 ABC peptide transporter, substrate binding protein; extracellular solute-binding protein complement(2495499..2497436) Rhodobacter sphaeroides ATCC 17029 4897098 YP_001044234.1 CDS Rsph17029_2360 NC_009049.1 2497605 2498129 R PFAM: cytochrome c, class I; KEGG: rsp:RSP_0705 cytochrome cy; cytochrome c, class I complement(2497605..2498129) Rhodobacter sphaeroides ATCC 17029 4897761 YP_001044235.1 CDS Rsph17029_2361 NC_009049.1 2498250 2499083 D catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 2498250..2499083 Rhodobacter sphaeroides ATCC 17029 4897968 YP_001044236.1 CDS Rsph17029_2362 NC_009049.1 2499114 2499620 R KEGG: rsp:RSP_0707 hypothetical protein; hypothetical protein complement(2499114..2499620) Rhodobacter sphaeroides ATCC 17029 4897109 YP_001044237.1 CDS Rsph17029_2363 NC_009049.1 2499658 2500611 R PFAM: NUDIX hydrolase; KEGG: rsp:RSP_0708 NUDIX hydrolase; NUDIX hydrolase complement(2499658..2500611) Rhodobacter sphaeroides ATCC 17029 4897156 YP_001044238.1 CDS Rsph17029_2364 NC_009049.1 2500845 2502737 D PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rsp:RSP_0709 2',3'-cyclic-nucleotide 2'-phosphodiesterase; 5'-nucleotidase domain-containing protein 2500845..2502737 Rhodobacter sphaeroides ATCC 17029 4897167 YP_001044239.1 CDS Rsph17029_2365 NC_009049.1 2503060 2504802 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 2503060..2504802 Rhodobacter sphaeroides ATCC 17029 4896669 YP_001044240.1 CDS Rsph17029_2366 NC_009049.1 2504815 2505159 D PFAM: conserved hypothetical protein 103; KEGG: rsp:RSP_0711 hypothetical protein; hypothetical protein 2504815..2505159 Rhodobacter sphaeroides ATCC 17029 4897185 YP_001044241.1 CDS recR NC_009049.1 2505161 2505760 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2505161..2505760 Rhodobacter sphaeroides ATCC 17029 4897183 YP_001044242.1 CDS Rsph17029_2368 NC_009049.1 2505840 2507060 R KEGG: rsp:RSP_0713 hypothetical protein; hypothetical protein complement(2505840..2507060) Rhodobacter sphaeroides ATCC 17029 4897161 YP_001044243.1 CDS Rsph17029_2369 NC_009049.1 2507256 2508002 R PFAM: protein of unknown function DUF1013; KEGG: rsp:RSP_0714 hypothetical protein; hypothetical protein complement(2507256..2508002) Rhodobacter sphaeroides ATCC 17029 4897220 YP_001044244.1 CDS Rsph17029_2370 NC_009049.1 2508124 2508744 D PFAM: ribonuclease T2; KEGG: rsp:RSP_0715 ribonuclease T2; ribonuclease T2 2508124..2508744 Rhodobacter sphaeroides ATCC 17029 4897773 YP_001044245.1 CDS Rsph17029_2371 NC_009049.1 2509047 2510033 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0716 NADPH/quinone reductase and related Zn-dependent oxidoreductase; alcohol dehydrogenase complement(2509047..2510033) Rhodobacter sphaeroides ATCC 17029 4897200 YP_001044246.1 CDS Rsph17029_2372 NC_009049.1 2510177 2510869 R TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein; KEGG: rsp:RSP_0717 hypothetical protein; rpsU-divergently transcribed protein complement(2510177..2510869) Rhodobacter sphaeroides ATCC 17029 4897191 YP_001044247.1 CDS rpsU NC_009049.1 2511076 2511282 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2511076..2511282 Rhodobacter sphaeroides ATCC 17029 4897297 YP_001044248.1 CDS Rsph17029_2374 NC_009049.1 2511556 2512254 D catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2511556..2512254 Rhodobacter sphaeroides ATCC 17029 4897222 YP_001044249.1 CDS Rsph17029_2375 NC_009049.1 2512258 2512995 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_0720 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2512258..2512995 Rhodobacter sphaeroides ATCC 17029 4897308 YP_001044250.1 CDS Rsph17029_2376 NC_009049.1 2513019 2513633 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0721 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 2513019..2513633 Rhodobacter sphaeroides ATCC 17029 4897317 YP_001044251.1 CDS Rsph17029_2377 NC_009049.1 2513672 2514130 R PFAM: regulatory protein, AsnC/Lrp family; regulatory protein, MarR; KEGG: rsp:RSP_0722 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2513672..2514130) Rhodobacter sphaeroides ATCC 17029 4897302 YP_001044252.1 CDS Rsph17029_2378 NC_009049.1 2514270 2515388 D TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: rsp:RSP_0723 alanine dehydrogenase; alanine dehydrogenase 2514270..2515388 Rhodobacter sphaeroides ATCC 17029 4897215 YP_001044253.1 CDS mscL NC_009049.1 2515662 2516102 R homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(2515662..2516102) Rhodobacter sphaeroides ATCC 17029 4897338 YP_001044254.1 CDS Rsph17029_2380 NC_009049.1 2516566 2517117 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_0725 thioredoxin, thioldisulfide interchange protein; alkyl hydroperoxide reductase complement(2516566..2517117) Rhodobacter sphaeroides ATCC 17029 4897381 YP_001044255.1 CDS Rsph17029_2381 NC_009049.1 2517139 2518554 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2517139..2518554 Rhodobacter sphaeroides ATCC 17029 4897833 YP_001044256.1 CDS Rsph17029_2382 NC_009049.1 2518706 2518924 D KEGG: rsp:RSP_0727 hypothetical protein; hypothetical protein 2518706..2518924 Rhodobacter sphaeroides ATCC 17029 4895987 YP_001044257.1 CDS Rsph17029_2383 NC_009049.1 2518926 2519243 D KEGG: rsp:RSP_0728 hypothetical protein; hypothetical protein 2518926..2519243 Rhodobacter sphaeroides ATCC 17029 4897938 YP_001044258.1 CDS Rsph17029_2384 NC_009049.1 2519439 2520704 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rsp:RSP_0729 Orn/DAP/Arg decarboxylase, family 2; diaminopimelate decarboxylase 2519439..2520704 Rhodobacter sphaeroides ATCC 17029 4897404 YP_001044259.1 CDS Rsph17029_2385 NC_009049.1 2520733 2523237 D KEGG: rsp:RSP_0730 hypothetical protein; hypothetical protein 2520733..2523237 Rhodobacter sphaeroides ATCC 17029 4897428 YP_001044260.1 CDS Rsph17029_2386 NC_009049.1 2523421 2524527 R TIGRFAM: MJ0042 family finger-like protein; KEGG: rsp:RSP_0732 hypothetical protein; Zinc finger-domain-containing protein complement(2523421..2524527) Rhodobacter sphaeroides ATCC 17029 4897467 YP_001044261.1 CDS Rsph17029_2387 NC_009049.1 2524691 2525362 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0733 cell division ATP-binding protein FtsE; ABC transporter 2524691..2525362 Rhodobacter sphaeroides ATCC 17029 4897436 YP_001044262.1 CDS Rsph17029_2388 NC_009049.1 2525359 2526261 D PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_0734 cell division protein FtsX; hypothetical protein 2525359..2526261 Rhodobacter sphaeroides ATCC 17029 4897473 YP_001044263.1 CDS Rsph17029_2389 NC_009049.1 2526263 2526988 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_0735 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 2526263..2526988 Rhodobacter sphaeroides ATCC 17029 4895065 YP_001044264.1 CDS Rsph17029_2390 NC_009049.1 2527001 2527591 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0736 MobC protein; N-acetyltransferase GCN5 complement(2527001..2527591) Rhodobacter sphaeroides ATCC 17029 4897483 YP_001044265.1 CDS Rsph17029_2391 NC_009049.1 2527588 2528946 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rsp:RSP_0737 molybdopterin guanine dinucleotide synthesis; putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/hypothetical protein complement(2527588..2528946) Rhodobacter sphaeroides ATCC 17029 4897541 YP_001044266.1 CDS Rsph17029_2392 NC_009049.1 2528943 2529524 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: rsp:RSP_0738 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(2528943..2529524) Rhodobacter sphaeroides ATCC 17029 4897540 YP_001044267.1 CDS Rsph17029_2393 NC_009049.1 2529600 2530307 D PFAM: AzlC family protein; KEGG: rsp:RSP_0739 branched chain amino acid efflux pump, large (AzlC) subunit; AzlC family protein 2529600..2530307 Rhodobacter sphaeroides ATCC 17029 4897553 YP_001044268.1 CDS Rsph17029_2394 NC_009049.1 2530304 2530636 D PFAM: branched-chain amino acid transport; KEGG: rsp:RSP_6126 putative transmembrane protein; branched-chain amino acid transport 2530304..2530636 Rhodobacter sphaeroides ATCC 17029 4897551 YP_001044269.1 CDS Rsph17029_2395 NC_009049.1 2530665 2531276 R KEGG: rsp:RSP_6127 hypothetical protein; hypothetical protein complement(2530665..2531276) Rhodobacter sphaeroides ATCC 17029 4897549 YP_001044270.1 CDS Rsph17029_2396 NC_009049.1 2531311 2531496 R PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: rsp:RSP_6128 Aa3-type cytochrome c oxidase subunit IV; aa3 type cytochrome c oxidase subunit IV complement(2531311..2531496) Rhodobacter sphaeroides ATCC 17029 4897579 YP_001044271.1 CDS Rsph17029_2397 NC_009049.1 2531556 2532590 R PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0741 putative metallo-beta-lactamase family protein; beta-lactamase domain-containing protein complement(2531556..2532590) Rhodobacter sphaeroides ATCC 17029 4897584 YP_001044272.1 CDS Rsph17029_2398 NC_009049.1 2532587 2534275 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_0742 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(2532587..2534275) Rhodobacter sphaeroides ATCC 17029 4897701 YP_001044273.1 CDS Rsph17029_2399 NC_009049.1 2534384 2535322 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: rsp:RSP_0743 putative translation factor; Sua5/YciO/YrdC/YwlC family protein 2534384..2535322 Rhodobacter sphaeroides ATCC 17029 4897693 YP_001044274.1 CDS Rsph17029_2400 NC_009049.1 2535465 2536112 R KEGG: rsp:RSP_0744 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(2535465..2536112) Rhodobacter sphaeroides ATCC 17029 4897856 YP_001044275.1 CDS Rsph17029_2401 NC_009049.1 2536322 2537497 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 2536322..2537497 Rhodobacter sphaeroides ATCC 17029 4897740 YP_001044276.1 CDS Rsph17029_2402 NC_009049.1 2537597 2538319 D TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0747 short-chain dehydrogenase/reductase; acetoacetyl-CoA reductase 2537597..2538319 Rhodobacter sphaeroides ATCC 17029 4897739 YP_001044277.1 CDS Rsph17029_2403 NC_009049.1 2538462 2538647 R PFAM: protein of unknown function DUF465; KEGG: pde:Pden_2028 protein of unknown function DUF465; hypothetical protein complement(2538462..2538647) Rhodobacter sphaeroides ATCC 17029 4897753 YP_001044278.1 CDS Rsph17029_2404 NC_009049.1 2538728 2539489 R PFAM: methyltransferase small; Methyltransferase type 11; KEGG: rsp:RSP_0748 N-6 adenine-specific DNA methylase; methyltransferase small complement(2538728..2539489) Rhodobacter sphaeroides ATCC 17029 4897751 YP_001044279.1 CDS Rsph17029_2405 NC_009049.1 2539489 2539704 R KEGG: rsp:RSP_0749 hypothetical protein; hypothetical protein complement(2539489..2539704) Rhodobacter sphaeroides ATCC 17029 4897747 YP_001044280.1 CDS Rsph17029_2406 NC_009049.1 2539773 2540774 D PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_0750 geranylgeranyl pyrophosphate synthase/polyprenyl synthetase; trans-hexaprenyltranstransferase 2539773..2540774 Rhodobacter sphaeroides ATCC 17029 4897765 YP_001044281.1 CDS Rsph17029_2407 NC_009049.1 2541096 2541563 D PFAM: protein of unknown function DUF1052; KEGG: rsp:RSP_0751 hypothetical protein; hypothetical protein 2541096..2541563 Rhodobacter sphaeroides ATCC 17029 4897781 YP_001044282.1 CDS Rsph17029_2408 NC_009049.1 2541564 2541785 R KEGG: rsp:RSP_6129 hypothetical protein; hypothetical protein complement(2541564..2541785) Rhodobacter sphaeroides ATCC 17029 4897716 YP_001044283.1 CDS Rsph17029_2409 NC_009049.1 2541901 2542386 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0752 acetyltransferase (GNAT) family; N-acetyltransferase GCN5 2541901..2542386 Rhodobacter sphaeroides ATCC 17029 4897770 YP_001044284.1 CDS Rsph17029_2410 NC_009049.1 2543156 2544028 R PFAM: protein of unknown function DUF481; KEGG: rsp:RSP_0753 salt-stress induced outer membrane protein; hypothetical protein complement(2543156..2544028) Rhodobacter sphaeroides ATCC 17029 4896484 YP_001044285.1 CDS Rsph17029_2411 NC_009049.1 2544236 2544556 R KEGG: rsp:RSP_0754 hypothetical protein; hypothetical protein complement(2544236..2544556) Rhodobacter sphaeroides ATCC 17029 4897797 YP_001044286.1 CDS Rsph17029_2412 NC_009049.1 2544872 2545345 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rsp:RSP_0755 putative N utilization substance protein B; NusB antitermination factor complement(2544872..2545345) Rhodobacter sphaeroides ATCC 17029 4897791 YP_001044287.1 CDS ribH NC_009049.1 2545342 2545878 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(2545342..2545878) Rhodobacter sphaeroides ATCC 17029 4897769 YP_001044288.1 CDS Rsph17029_2414 NC_009049.1 2545882 2546985 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: rsp:RSP_0757 bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(2545882..2546985) Rhodobacter sphaeroides ATCC 17029 4897808 YP_001044289.1 CDS Rsph17029_2415 NC_009049.1 2547032 2547319 D hypothetical protein 2547032..2547319 Rhodobacter sphaeroides ATCC 17029 4896865 YP_001044290.1 CDS Rsph17029_2416 NC_009049.1 2547301 2547861 R KEGG: rsp:RSP_6130 hypothetical protein; hypothetical protein complement(2547301..2547861) Rhodobacter sphaeroides ATCC 17029 4897800 YP_001044291.1 CDS Rsph17029_2417 NC_009049.1 2547863 2548459 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2547863..2548459) Rhodobacter sphaeroides ATCC 17029 4897799 YP_001044292.1 CDS Rsph17029_2418 NC_009049.1 2548671 2549807 D PFAM: polysaccharide export protein; KEGG: rsp:RSP_0759 putative capsule polysaccharide exporter; polysaccharide export protein 2548671..2549807 Rhodobacter sphaeroides ATCC 17029 4897930 YP_001044293.1 CDS Rsph17029_2419 NC_009049.1 2550238 2550735 R PFAM: regulatory protein, MarR; KEGG: rsp:RSP_0760 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2550238..2550735) Rhodobacter sphaeroides ATCC 17029 4897814 YP_001044294.1 CDS Rsph17029_2420 NC_009049.1 2550825 2551094 R PFAM: protein of unknown function DUF339; KEGG: rsp:RSP_0761 hypothetical protein; hypothetical protein complement(2550825..2551094) Rhodobacter sphaeroides ATCC 17029 4897812 YP_001044295.1 CDS Rsph17029_2421 NC_009049.1 2551091 2551489 R PFAM: helix-turn-helix domain protein; KEGG: rsp:RSP_0762 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(2551091..2551489) Rhodobacter sphaeroides ATCC 17029 4897154 YP_001044296.1 CDS Rsph17029_2422 NC_009049.1 2551604 2552806 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2551604..2552806 Rhodobacter sphaeroides ATCC 17029 4897826 YP_001044297.1 CDS Rsph17029_2423 NC_009049.1 2552878 2554233 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rsp:RSP_0764 multi antimicrobial extrusion (MATE) family efflux pump NorM; MATE efflux family protein complement(2552878..2554233) Rhodobacter sphaeroides ATCC 17029 4897824 YP_001044298.1 CDS Rsph17029_2424 NC_009049.1 2554284 2554925 R PFAM: Methyltransferase type 11; KEGG: rsp:RSP_0765 SAM-dependent methyltransferase; type 11 methyltransferase complement(2554284..2554925) Rhodobacter sphaeroides ATCC 17029 4897842 YP_001044299.1 CDS Rsph17029_2425 NC_009049.1 2554922 2555944 R PFAM: protein of unknown function DUF344; KEGG: rsp:RSP_0766 hypothetical protein; hypothetical protein complement(2554922..2555944) Rhodobacter sphaeroides ATCC 17029 4897840 YP_001044300.1 CDS Rsph17029_2426 NC_009049.1 2556183 2557919 R PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_0768 transcriptional regulator, LuxR family; regulatory protein LuxR complement(2556183..2557919) Rhodobacter sphaeroides ATCC 17029 4897838 YP_001044301.1 CDS Rsph17029_2427 NC_009049.1 2558008 2558667 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_0769 glutathione S-transferase; glutathione S-transferase domain-containing protein 2558008..2558667 Rhodobacter sphaeroides ATCC 17029 4897821 YP_001044302.1 CDS Rsph17029_2428 NC_009049.1 2558728 2560719 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2558728..2560719 Rhodobacter sphaeroides ATCC 17029 4897887 YP_001044303.1 CDS Rsph17029_2429 NC_009049.1 2560938 2562158 R catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase complement(2560938..2562158) Rhodobacter sphaeroides ATCC 17029 4897879 YP_001044304.1 CDS Rsph17029_2430 NC_009049.1 2562650 2564971 R PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: rsp:RSP_0774 RNA binding protein; RNA-binding S1 domain-containing protein complement(2562650..2564971) Rhodobacter sphaeroides ATCC 17029 4897846 YP_001044305.1 CDS Rsph17029_2431 NC_009049.1 2565055 2565444 R KEGG: rsp:RSP_0775 class I monoheme cytochrome c; class I monoheme cytochrome c complement(2565055..2565444) Rhodobacter sphaeroides ATCC 17029 4897907 YP_001044306.1 CDS Rsph17029_2432 NC_009049.1 2565503 2566177 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0776 ABC lipoprotein efflux transporter, ATPase subunit, LolD; ABC transporter complement(2565503..2566177) Rhodobacter sphaeroides ATCC 17029 4897893 YP_001044307.1 CDS Rsph17029_2433 NC_009049.1 2566170 2567456 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_0777 ABC lipoprotein efflux transporter, inner membrane subunit, LolE; LolC/E family lipoprotein releasing system, transmembrane protein complement(2566170..2567456) Rhodobacter sphaeroides ATCC 17029 4897931 YP_001044308.1 CDS Rsph17029_2434 NC_009049.1 2567572 2568909 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(2567572..2568909) Rhodobacter sphaeroides ATCC 17029 4897929 YP_001044309.1 CDS Rsph17029_2435 NC_009049.1 2569361 2570437 D PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_0779 lipocalin-related protein and Bos/Can/Equ allergen; hypothetical protein 2569361..2570437 Rhodobacter sphaeroides ATCC 17029 4897926 YP_001044310.1 CDS Rsph17029_2436 NC_009049.1 2570434 2571114 D PFAM: Chromosomal replication initiator, DnaA; KEGG: rsp:RSP_0780 hypothetical protein with ATP/GTP-binding site; chromosomal replication initiator DnaA 2570434..2571114 Rhodobacter sphaeroides ATCC 17029 4897912 YP_001044311.1 CDS Rsph17029_2437 NC_009049.1 2571174 2573360 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2571174..2573360 Rhodobacter sphaeroides ATCC 17029 4897964 YP_001044312.1 CDS Rsph17029_2438 NC_009049.1 2573497 2575038 D PFAM: Ppx/GppA phosphatase; KEGG: rsp:RSP_0782 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2573497..2575038 Rhodobacter sphaeroides ATCC 17029 4897958 YP_001044313.1 CDS Rsph17029_2439 NC_009049.1 2575035 2575637 D KEGG: rsp:RSP_0783 hypothetical protein; hypothetical protein 2575035..2575637 Rhodobacter sphaeroides ATCC 17029 4897956 YP_001044314.1 CDS Rsph17029_2440 NC_009049.1 2575660 2576136 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0784 putative acetyltransferase, GNAT family; N-acetyltransferase GCN5 2575660..2576136 Rhodobacter sphaeroides ATCC 17029 4897955 YP_001044315.1 CDS Rsph17029_2441 NC_009049.1 2576168 2576851 D PFAM: heat shock protein DnaJ domain protein; KEGG: rsp:RSP_0785 putative heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein 2576168..2576851 Rhodobacter sphaeroides ATCC 17029 4897971 YP_001044316.1 CDS Rsph17029_2442 NC_009049.1 2576852 2577871 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0786 possible endonuclease/exonuclease/phosphatase fa; endonuclease/exonuclease/phosphatase 2576852..2577871 Rhodobacter sphaeroides ATCC 17029 4895219 YP_001044317.1 CDS Rsph17029_2443 NC_009049.1 2578390 2578806 D KEGG: rsp:RSP_0787 hypothetical protein; hypothetical protein 2578390..2578806 Rhodobacter sphaeroides ATCC 17029 4897970 YP_001044318.1 CDS Rsph17029_2444 NC_009049.1 2578803 2579636 D KEGG: rsp:RSP_0788 hypothetical protein; hypothetical protein 2578803..2579636 Rhodobacter sphaeroides ATCC 17029 4897944 YP_001044319.1 CDS Rsph17029_2445 NC_009049.1 2579646 2580620 D PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_0789 aminotransferase, class-I; class I and II aminotransferase 2579646..2580620 Rhodobacter sphaeroides ATCC 17029 4897954 YP_001044320.1 CDS Rsph17029_2446 NC_009049.1 2580721 2581863 R KEGG: rsp:RSP_0790 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE complement(2580721..2581863) Rhodobacter sphaeroides ATCC 17029 4897898 YP_001044321.1 CDS Rsph17029_2447 NC_009049.1 2581863 2582159 R PFAM: coenzyme PQQ synthesis D; KEGG: rsp:RSP_0791 putative pyrroloquinoline quinone synthesis protein D; coenzyme PQQ biosynthesis protein PqqD complement(2581863..2582159) Rhodobacter sphaeroides ATCC 17029 4897736 YP_001044322.1 CDS Rsph17029_2448 NC_009049.1 2582156 2582923 R Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC complement(2582156..2582923) Rhodobacter sphaeroides ATCC 17029 4897720 YP_001044323.1 CDS Rsph17029_2449 NC_009049.1 2582920 2583822 R possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB complement(2582920..2583822) Rhodobacter sphaeroides ATCC 17029 4897177 YP_001044324.1 CDS pqqA NC_009049.1 2583841 2583921 R Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA complement(2583841..2583921) Rhodobacter sphaeroides ATCC 17029 4895992 YP_001044325.1 CDS Rsph17029_2451 NC_009049.1 2584153 2585109 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_0794 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2584153..2585109) Rhodobacter sphaeroides ATCC 17029 4896534 YP_001044326.1 CDS Rsph17029_2452 NC_009049.1 2585456 2585875 R PFAM: DGPFAETKE family protein; KEGG: rsp:RSP_0795 hypothetical protein; DGPFAETKE family protein complement(2585456..2585875) Rhodobacter sphaeroides ATCC 17029 4896613 YP_001044327.1 CDS Rsph17029_2453 NC_009049.1 2586021 2587466 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2586021..2587466 Rhodobacter sphaeroides ATCC 17029 4896954 YP_001044328.1 CDS Rsph17029_2454 NC_009049.1 2587517 2587900 D KEGG: rsp:RSP_6229 hypothetical protein; hypothetical protein 2587517..2587900 Rhodobacter sphaeroides ATCC 17029 4897656 YP_001044329.1 CDS gltX NC_009049.1 2587901 2589226 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2587901..2589226) Rhodobacter sphaeroides ATCC 17029 4897091 YP_001044330.1 CDS Rsph17029_2456 NC_009049.1 2589518 2589928 D PFAM: protein of unknown function DUF1025; KEGG: rsp:RSP_0798 neutral zinc metallopeptidase; hypothetical protein 2589518..2589928 Rhodobacter sphaeroides ATCC 17029 4897494 YP_001044331.1 CDS Rsph17029_2457 NC_009049.1 2590022 2590945 D PFAM: beta-lactamase domain protein; KEGG: rsp:RSP_0799 hypothetical protein; beta-lactamase domain-containing protein 2590022..2590945 Rhodobacter sphaeroides ATCC 17029 4896578 YP_001044332.1 CDS Rsph17029_2458 NC_009049.1 2591164 2591421 R PFAM: protein of unknown function DUF167; KEGG: rsp:RSP_0800 hypothetical protein; hypothetical protein complement(2591164..2591421) Rhodobacter sphaeroides ATCC 17029 4895978 YP_001044333.1 CDS Rsph17029_2459 NC_009049.1 2591481 2592620 D PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_0801 deacetylase / probable acetylpolyamine aminohydrolase; histone deacetylase superfamily protein 2591481..2592620 Rhodobacter sphaeroides ATCC 17029 4897143 YP_001044334.1 CDS Rsph17029_2460 NC_009049.1 2592962 2594029 R PFAM: peptidase M19, renal dipeptidase; KEGG: rsp:RSP_0802 dipeptidase; peptidase M19 complement(2592962..2594029) Rhodobacter sphaeroides ATCC 17029 4895933 YP_001044335.1 CDS Rsph17029_2461 NC_009049.1 2594026 2594781 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0803 ABC dipeptide transporter, ATPase subunit DppF; ABC transporter complement(2594026..2594781) Rhodobacter sphaeroides ATCC 17029 4897270 YP_001044336.1 CDS Rsph17029_2462 NC_009049.1 2594781 2595605 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0804 ABC dipeptide transporter, ATPase subunit DppD; ABC transporter complement(2594781..2595605) Rhodobacter sphaeroides ATCC 17029 4897565 YP_001044337.1 CDS Rsph17029_2463 NC_009049.1 2595706 2596608 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0805 ABC dipeptide transporter, inner membrane subunit DppC; binding-protein-dependent transport system inner membrane protein complement(2595706..2596608) Rhodobacter sphaeroides ATCC 17029 4897450 YP_001044338.1 CDS Rsph17029_2464 NC_009049.1 2596605 2597675 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0806 ABC dipeptide transporter, inner membrane subunit DppB; binding-protein-dependent transport system inner membrane protein complement(2596605..2597675) Rhodobacter sphaeroides ATCC 17029 4895678 YP_001044339.1 CDS Rsph17029_2465 NC_009049.1 2597676 2599265 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_0807 ABC dipeptide transporter, substrate-binding subunit DdpA; extracellular solute-binding protein complement(2597676..2599265) Rhodobacter sphaeroides ATCC 17029 4897342 YP_001044340.1 CDS Rsph17029_2466 NC_009049.1 2599593 2600171 D PFAM: nitroreductase; KEGG: rsp:RSP_0809 hypothetical protein; nitroreductase 2599593..2600171 Rhodobacter sphaeroides ATCC 17029 4896118 YP_001044341.1 CDS Rsph17029_2467 NC_009049.1 2600168 2600860 D KEGG: rsp:RSP_0810 hypothetical protein; hypothetical protein 2600168..2600860 Rhodobacter sphaeroides ATCC 17029 4896624 YP_001044342.1 CDS Rsph17029_2468 NC_009049.1 2600875 2601156 R PFAM: protein of unknown function DUF1467; KEGG: rsp:RSP_0811 hypothetical protein; hypothetical protein complement(2600875..2601156) Rhodobacter sphaeroides ATCC 17029 4897124 YP_001044343.1 CDS Rsph17029_2469 NC_009049.1 2601153 2601557 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_0812 glyoxalase I (lactoylglutathione lyase); glyoxalase/bleomycin resistance protein/dioxygenase complement(2601153..2601557) Rhodobacter sphaeroides ATCC 17029 4897307 YP_001044344.1 CDS Rsph17029_2470 NC_009049.1 2601814 2602515 D PFAM: response regulator receiver; KEGG: rsp:RSP_0813 response regulator receiver protein; response regulator receiver protein 2601814..2602515 Rhodobacter sphaeroides ATCC 17029 4895497 YP_001044345.1 CDS Rsph17029_2471 NC_009049.1 2602783 2603496 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0814 acetyltransferase; N-acetyltransferase GCN5 complement(2602783..2603496) Rhodobacter sphaeroides ATCC 17029 4895803 YP_001044346.1 CDS aspS NC_009049.1 2603500 2605275 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(2603500..2605275) Rhodobacter sphaeroides ATCC 17029 4895882 YP_001044347.1 CDS Rsph17029_2473 NC_009049.1 2605491 2606132 R KEGG: rsp:RSP_0816 putative aminotransferase, class IV; hypothetical protein complement(2605491..2606132) Rhodobacter sphaeroides ATCC 17029 4896548 YP_001044348.1 CDS Rsph17029_2474 NC_009049.1 2606084 2607229 R catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase complement(2606084..2607229) Rhodobacter sphaeroides ATCC 17029 4896725 YP_001044349.1 CDS carB NC_009049.1 2607418 2610747 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2607418..2610747 Rhodobacter sphaeroides ATCC 17029 4897495 YP_001044350.1 CDS Rsph17029_2476 NC_009049.1 2611350 2612735 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rsp:RSP_0819 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2611350..2612735 Rhodobacter sphaeroides ATCC 17029 4897614 YP_001044351.1 CDS Rsph17029_2477 NC_009049.1 2613097 2613273 D KEGG: rsp:RSP_6134 hypothetical protein; hypothetical protein 2613097..2613273 Rhodobacter sphaeroides ATCC 17029 4895915 YP_001044352.1 CDS Rsph17029_2478 NC_009049.1 2613303 2613812 D PFAM: cytochrome B561; KEGG: rsp:RSP_0820 putative cytochrome b561; cytochrome B561 2613303..2613812 Rhodobacter sphaeroides ATCC 17029 4897221 YP_001044353.1 CDS Rsph17029_2479 NC_009049.1 2613853 2614623 R PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_0821 esterase/lipase/thioesterase; alpha/beta hydrolase complement(2613853..2614623) Rhodobacter sphaeroides ATCC 17029 4895373 YP_001044354.1 CDS Rsph17029_2480 NC_009049.1 2614717 2615088 D KEGG: rsp:RSP_0822 hypothetical protein; hypothetical protein 2614717..2615088 Rhodobacter sphaeroides ATCC 17029 4898081 YP_001044355.1 CDS glyA NC_009049.1 2615161 2616456 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2615161..2616456) Rhodobacter sphaeroides ATCC 17029 4895199 YP_001044356.1 CDS ppnK NC_009049.1 2616623 2617387 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2616623..2617387 Rhodobacter sphaeroides ATCC 17029 4897400 YP_001044357.1 CDS Rsph17029_2483 NC_009049.1 2617384 2618061 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(2617384..2618061) Rhodobacter sphaeroides ATCC 17029 4897622 YP_001044358.1 CDS Rsph17029_2484 NC_009049.1 2618194 2618508 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_0826 hypothetical protein; antibiotic biosynthesis monooxygenase 2618194..2618508 Rhodobacter sphaeroides ATCC 17029 4897638 YP_001044359.1 CDS Rsph17029_2485 NC_009049.1 2618799 2619410 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(2618799..2619410) Rhodobacter sphaeroides ATCC 17029 4895682 YP_001044360.1 CDS Rsph17029_2486 NC_009049.1 2619698 2620855 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_0828 major facilitator superfamily (MFS) transporter; major facilitator superfamily transporter 2619698..2620855 Rhodobacter sphaeroides ATCC 17029 4896054 YP_001044361.1 CDS Rsph17029_2487 NC_009049.1 2620860 2622023 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rsp:RSP_0829 lactate dehydrogenase; L-lactate dehydrogenase (cytochrome) complement(2620860..2622023) Rhodobacter sphaeroides ATCC 17029 4897923 YP_001044362.1 CDS Rsph17029_2488 NC_009049.1 2622368 2623468 R PFAM: CBS domain containing protein; HPP family protein+B94; KEGG: rsp:RSP_0830 CBS-domain-containing membrane protein; hypothetical protein complement(2622368..2623468) Rhodobacter sphaeroides ATCC 17029 4895789 YP_001044363.1 CDS trpA NC_009049.1 2623513 2624304 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(2623513..2624304) Rhodobacter sphaeroides ATCC 17029 4896167 YP_001044364.1 CDS Rsph17029_2490 NC_009049.1 2624808 2625905 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2624808..2625905 Rhodobacter sphaeroides ATCC 17029 4895234 YP_001044365.1 CDS Rsph17029_2491 NC_009049.1 2626245 2627699 D KEGG: rsp:RSP_0834 mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2626245..2627699 Rhodobacter sphaeroides ATCC 17029 4895249 YP_001044366.1 CDS Rsph17029_2492 NC_009049.1 2627696 2629072 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rsp:RSP_0835 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 2627696..2629072 Rhodobacter sphaeroides ATCC 17029 4895717 YP_001044367.1 CDS Rsph17029_2493 NC_009049.1 2629438 2631819 D KEGG: rsp:RSP_6136 hypothetical protein; hypothetical protein 2629438..2631819 Rhodobacter sphaeroides ATCC 17029 4896244 YP_001044368.1 CDS Rsph17029_2494 NC_009049.1 2631981 2633159 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_0836 putative flavoprotein; hypothetical protein 2631981..2633159 Rhodobacter sphaeroides ATCC 17029 4896747 YP_001044369.1 CDS Rsph17029_2495 NC_009049.1 2633134 2633829 R KEGG: rsp:RSP_0837 hypothetical protein; hypothetical protein complement(2633134..2633829) Rhodobacter sphaeroides ATCC 17029 4896998 YP_001044370.1 CDS Rsph17029_2496 NC_009049.1 2633935 2634927 R PFAM: DNA polymerase III, delta; KEGG: rsp:RSP_0838 putative DNA polymerase III, delta subunit / DNA binding; DNA polymerase III subunit delta' complement(2633935..2634927) Rhodobacter sphaeroides ATCC 17029 4895325 YP_001044371.1 CDS Rsph17029_2497 NC_009049.1 2634924 2635412 R KEGG: rsp:RSP_0839 predicted secreted periplasmic protein; secreted periplasmic protein complement(2634924..2635412) Rhodobacter sphaeroides ATCC 17029 4896464 YP_001044372.1 CDS leuS NC_009049.1 2635399 2637942 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(2635399..2637942) Rhodobacter sphaeroides ATCC 17029 4895451 YP_001044373.1 CDS Rsph17029_2499 NC_009049.1 2638063 2638599 R KEGG: rsp:RSP_0841 hypothetical protein; hypothetical protein complement(2638063..2638599) Rhodobacter sphaeroides ATCC 17029 4895461 YP_001044374.1 CDS Rsph17029_2500 NC_009049.1 2638883 2639872 D KEGG: rsp:RSP_0842 putative porin; putative porin 2638883..2639872 Rhodobacter sphaeroides ATCC 17029 4896754 YP_001044375.1 CDS Rsph17029_2501 NC_009049.1 2640027 2642180 D PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rsp:RSP_0843 conserved protein containing sulfotransfer domain; sulfotransferase 2640027..2642180 Rhodobacter sphaeroides ATCC 17029 4897668 YP_001044376.1 CDS Rsph17029_2502 NC_009049.1 2642173 2642838 D PFAM: alanine racemase domain protein; KEGG: rsp:RSP_0844 hypothetical protein; alanine racemase domain-containing protein 2642173..2642838 Rhodobacter sphaeroides ATCC 17029 4897373 YP_001044377.1 CDS Rsph17029_2503 NC_009049.1 2642858 2643352 R KEGG: rsp:RSP_0845 hypothetical protein; hypothetical protein complement(2642858..2643352) Rhodobacter sphaeroides ATCC 17029 4897405 YP_001044378.1 CDS Rsph17029_2504 NC_009049.1 2643349 2644437 R PFAM: GTP cyclohydrolase II; KEGG: rsp:RSP_0846 GTP cyclohydrolase II; GTP cyclohydrolase II complement(2643349..2644437) Rhodobacter sphaeroides ATCC 17029 4897099 YP_001044379.1 CDS Rsph17029_2505 NC_009049.1 2644590 2645276 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_0847 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2644590..2645276 Rhodobacter sphaeroides ATCC 17029 4895076 YP_001044380.1 CDS Rsph17029_2506 NC_009049.1 2645579 2646367 D TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_0848 exodeoxyribonuclease III; exodeoxyribonuclease III Xth 2645579..2646367 Rhodobacter sphaeroides ATCC 17029 4895625 YP_001044381.1 CDS Rsph17029_2507 NC_009049.1 2646398 2647021 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_6137 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2646398..2647021) Rhodobacter sphaeroides ATCC 17029 4897321 YP_001044382.1 CDS Rsph17029_2508 NC_009049.1 2647073 2647201 R KEGG: rsp:RSP_6138 hypothetical protein; hypothetical protein complement(2647073..2647201) Rhodobacter sphaeroides ATCC 17029 4895875 YP_001044383.1 CDS Rsph17029_2509 NC_009049.1 2647367 2648344 D PFAM: Rubrerythrin; protein of unknown function DUF125, transmembrane; KEGG: rsp:RSP_0850 hypothetical protein; rubrerythrin 2647367..2648344 Rhodobacter sphaeroides ATCC 17029 4897227 YP_001044384.1 CDS Rsph17029_2510 NC_009049.1 2648703 2649632 D PFAM: Auxin Efflux Carrier; KEGG: rsp:RSP_0851 putative transporter, AEC family; auxin efflux carrier 2648703..2649632 Rhodobacter sphaeroides ATCC 17029 4896247 YP_001044385.1 CDS Rsph17029_2511 NC_009049.1 2649648 2650478 D PFAM: putative esterase; KEGG: rsp:RSP_0852 S-formylglutathione hydrolase; carboxylesterase 2649648..2650478 Rhodobacter sphaeroides ATCC 17029 4897385 YP_001044386.1 CDS Rsph17029_2512 NC_009049.1 2650471 2650959 D PFAM: protein of unknown function DUF188; KEGG: rsp:RSP_0853 hypothetical protein; hypothetical protein 2650471..2650959 Rhodobacter sphaeroides ATCC 17029 4895624 YP_001044387.1 CDS Rsph17029_2513 NC_009049.1 2650956 2651867 D PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: rsp:RSP_0854 predicted ornithine cyclodeaminase; ornithine cyclodeaminase 2650956..2651867 Rhodobacter sphaeroides ATCC 17029 4896701 YP_001044388.1 CDS Rsph17029_2514 NC_009049.1 2651872 2652516 R KEGG: rsp:RSP_0855 hypothetical protein; hypothetical protein complement(2651872..2652516) Rhodobacter sphaeroides ATCC 17029 4895082 YP_001044389.1 CDS Rsph17029_2515 NC_009049.1 2652895 2654139 D KEGG: rsp:RSP_0856 S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase 2652895..2654139 Rhodobacter sphaeroides ATCC 17029 4897698 YP_001044390.1 CDS Rsph17029_2516 NC_009049.1 2654136 2654768 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rsp:RSP_0857 S-adenosylmethionine-diacylgycerolhomoserine-N- methlytransferase; type 11 methyltransferase 2654136..2654768 Rhodobacter sphaeroides ATCC 17029 4897634 YP_001044391.1 CDS Rsph17029_2517 NC_009049.1 2655174 2656127 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0858 putative transporter, RhaT family, DMT superfamily; hypothetical protein complement(2655174..2656127) Rhodobacter sphaeroides ATCC 17029 4895923 YP_001044392.1 CDS Rsph17029_2518 NC_009049.1 2656490 2657599 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(2656490..2657599) Rhodobacter sphaeroides ATCC 17029 4895083 YP_001044393.1 CDS Rsph17029_2519 NC_009049.1 2657696 2658625 R KEGG: rsp:RSP_0860 hypothetical protein; hypothetical protein complement(2657696..2658625) Rhodobacter sphaeroides ATCC 17029 4895150 YP_001044394.1 CDS Rsph17029_2520 NC_009049.1 2658712 2659548 R KEGG: rsp:RSP_0861 putative transmembrane hypothetical protein; hypothetical protein complement(2658712..2659548) Rhodobacter sphaeroides ATCC 17029 4897303 YP_001044395.1 CDS leuD NC_009049.1 2659787 2660392 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(2659787..2660392) Rhodobacter sphaeroides ATCC 17029 4895111 YP_001044396.1 CDS Rsph17029_2522 NC_009049.1 2660396 2660920 R KEGG: rsp:RSP_6139 hypothetical protein; hypothetical protein complement(2660396..2660920) Rhodobacter sphaeroides ATCC 17029 4895728 YP_001044397.1 CDS Rsph17029_2523 NC_009049.1 2660984 2662411 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(2660984..2662411) Rhodobacter sphaeroides ATCC 17029 4896667 YP_001044398.1 CDS Rsph17029_2524 NC_009049.1 2662658 2663197 D PFAM: SOUL heme-binding protein; KEGG: rsp:RSP_0864 putative heme-binding hypothetical protein; SOUL heme-binding protein 2662658..2663197 Rhodobacter sphaeroides ATCC 17029 4897426 YP_001044399.1 CDS Rsph17029_2525 NC_009049.1 2663410 2663730 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rsp:RSP_0865 hypothetical protein; iojap family protein 2663410..2663730 Rhodobacter sphaeroides ATCC 17029 4895185 YP_001044400.1 CDS Rsph17029_2526 NC_009049.1 2663730 2664197 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2663730..2664197 Rhodobacter sphaeroides ATCC 17029 4895191 YP_001044401.1 CDS rnhA NC_009049.1 2664298 2664753 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2664298..2664753 Rhodobacter sphaeroides ATCC 17029 4895459 YP_001044402.1 CDS Rsph17029_2528 NC_009049.1 2664786 2665277 D KEGG: rsp:RSP_0868 putative transcriptional regulator; putative transcriptional regulator 2664786..2665277 Rhodobacter sphaeroides ATCC 17029 4895270 YP_001044403.1 CDS Rsph17029_2529 NC_009049.1 2665516 2665878 D PFAM: response regulator receiver; KEGG: rsp:RSP_0869 response regulator receive protein; response regulator receiver protein 2665516..2665878 Rhodobacter sphaeroides ATCC 17029 4895222 YP_001044404.1 CDS Rsph17029_2530 NC_009049.1 2665990 2666340 D KEGG: rsp:RSP_0870 hypothetical protein; hypothetical protein 2665990..2666340 Rhodobacter sphaeroides ATCC 17029 4896017 YP_001044405.1 CDS Rsph17029_2531 NC_009049.1 2666347 2667519 R PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_0871 putative aminotransferase; class I and II aminotransferase complement(2666347..2667519) Rhodobacter sphaeroides ATCC 17029 4895308 YP_001044406.1 CDS Rsph17029_2532 NC_009049.1 2667660 2668193 D KEGG: rsp:RSP_0872 formylmethionine deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2667660..2668193 Rhodobacter sphaeroides ATCC 17029 4895370 YP_001044407.1 CDS Rsph17029_2533 NC_009049.1 2668193 2668684 D KEGG: rsp:RSP_0873 N-formylmethionyl tRNA deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2668193..2668684 Rhodobacter sphaeroides ATCC 17029 4895394 YP_001044408.1 CDS Rsph17029_2534 NC_009049.1 2668681 2669184 D TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: rsp:RSP_0874 formylmethionine deformylase; peptide deformylase 2668681..2669184 Rhodobacter sphaeroides ATCC 17029 4895431 YP_001044409.1 CDS Rsph17029_2535 NC_009049.1 2669187 2670095 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rsp:RSP_0875 methionyl-tRNA formyl transferase; methionyl-tRNA formyltransferase 2669187..2670095 Rhodobacter sphaeroides ATCC 17029 4895430 YP_001044410.1 CDS Rsph17029_2536 NC_009049.1 2670188 2673700 R TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rsp:RSP_0876 chromosome segregation protein SMC2; chromosome segregation protein SMC complement(2670188..2673700) Rhodobacter sphaeroides ATCC 17029 4895432 YP_001044411.1 CDS Rsph17029_2537 NC_009049.1 2673781 2674266 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0878 putative acetyltransferase protein; N-acetyltransferase GCN5 2673781..2674266 Rhodobacter sphaeroides ATCC 17029 4895428 YP_001044412.1 CDS Rsph17029_2538 NC_009049.1 2674217 2675101 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0877 putative transporter, RhaT family, DMT superfamily; hypothetical protein complement(2674217..2675101) Rhodobacter sphaeroides ATCC 17029 4895648 YP_001044413.1 CDS Rsph17029_2539 NC_009049.1 2675098 2675898 R PFAM: protein of unknown function DUF752; KEGG: rsp:RSP_0879 hypothetical protein; hypothetical protein complement(2675098..2675898) Rhodobacter sphaeroides ATCC 17029 4897649 YP_001044414.1 CDS Rsph17029_2540 NC_009049.1 2675953 2677014 D PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_0880 putative oxidoreductase, possibly D-amino acid oxidase protein; FAD dependent oxidoreductase 2675953..2677014 Rhodobacter sphaeroides ATCC 17029 4897330 YP_001044415.1 CDS Rsph17029_2541 NC_009049.1 2677310 2679343 R PFAM: Lytic transglycosylase, catalytic; Tetratricopeptide TPR_4; KEGG: rsp:RSP_0881 putative soluble lytic transglycosylase; lytic transglycosylase, catalytic complement(2677310..2679343) Rhodobacter sphaeroides ATCC 17029 4895540 YP_001044416.1 CDS Rsph17029_2542 NC_009049.1 2679424 2680296 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2679424..2680296 Rhodobacter sphaeroides ATCC 17029 4895643 YP_001044417.1 CDS smpB NC_009049.1 2680557 2681030 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2680557..2681030 Rhodobacter sphaeroides ATCC 17029 4896037 YP_001044418.1 CDS Rsph17029_2544 NC_009049.1 2681316 2682164 D PFAM: Rhodanese domain protein; KEGG: rsp:RSP_0885 thiosulfate sulfurtransferase, rhodanese-like; 3-mercaptopyruvate sulfurtransferase 2681316..2682164 Rhodobacter sphaeroides ATCC 17029 4895646 YP_001044419.1 CDS Rsph17029_2545 NC_009049.1 2682136 2683356 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2682136..2683356 Rhodobacter sphaeroides ATCC 17029 4895668 YP_001044420.1 CDS Rsph17029_2546 NC_009049.1 2683542 2684894 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rsp:RSP_0888 ammonium transporter, AmtB; ammonium transporter complement(2683542..2684894) Rhodobacter sphaeroides ATCC 17029 4895690 YP_001044421.1 CDS Rsph17029_2547 NC_009049.1 2684921 2685259 R PFAM: nitrogen regulatory protein P-II; KEGG: rsp:RSP_0889 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2684921..2685259) Rhodobacter sphaeroides ATCC 17029 4897969 YP_001044422.1 CDS Rsph17029_2548 NC_009049.1 2685421 2687787 D KEGG: rsp:RSP_0887 glycosyl transferase, family 51; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 2685421..2687787 Rhodobacter sphaeroides ATCC 17029 4895721 YP_001044423.1 CDS Rsph17029_2549 NC_009049.1 2687964 2688587 R PFAM: toluene tolerance family protein; KEGG: rsp:RSP_0890 possible protein YrbC precursor; toluene tolerance family protein complement(2687964..2688587) Rhodobacter sphaeroides ATCC 17029 4895722 YP_001044424.1 CDS Rsph17029_2550 NC_009049.1 2688577 2689365 R PFAM: VacJ family lipoprotein; KEGG: rsp:RSP_0891 putative lipoprotein; VacJ family lipoprotein complement(2688577..2689365) Rhodobacter sphaeroides ATCC 17029 4897415 YP_001044425.1 CDS Rsph17029_2551 NC_009049.1 2689575 2691311 D KEGG: rsp:RSP_0892 ABC protein toxin exporter, fused ATPase and inner membrane domain; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2689575..2691311 Rhodobacter sphaeroides ATCC 17029 4895822 YP_001044426.1 CDS Rsph17029_2552 NC_009049.1 2691308 2692609 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_0893 RTX secretion protein D, HlyD family; HlyD family type I secretion membrane fusion protein 2691308..2692609 Rhodobacter sphaeroides ATCC 17029 4895881 YP_001044427.1 CDS Rsph17029_2553 NC_009049.1 2692733 2693191 D PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_0894 hypothetical protein; endoribonuclease L-PSP 2692733..2693191 Rhodobacter sphaeroides ATCC 17029 4897424 YP_001044428.1 CDS Rsph17029_2554 NC_009049.1 2693191 2693961 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rsp:RSP_0895 phosphodiesterase-like; glycerophosphoryl diester phosphodiesterase 2693191..2693961 Rhodobacter sphaeroides ATCC 17029 4895941 YP_001044429.1 CDS Rsph17029_2555 NC_009049.1 2694031 2695275 D PFAM: protein of unknown function DUF482; KEGG: rsp:RSP_0896 hypothetical protein; hypothetical protein 2694031..2695275 Rhodobacter sphaeroides ATCC 17029 4895936 YP_001044430.1 CDS Rsph17029_2556 NC_009049.1 2695272 2695904 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_0897 glutathione S-transferase; glutathione S-transferase domain-containing protein 2695272..2695904 Rhodobacter sphaeroides ATCC 17029 4895955 YP_001044431.1 CDS Rsph17029_2557 NC_009049.1 2695897 2696175 D PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rsp:RSP_0898 pterin dehydratase; transcriptional coactivator/pterin dehydratase 2695897..2696175 Rhodobacter sphaeroides ATCC 17029 4895984 YP_001044432.1 CDS Rsph17029_2558 NC_009049.1 2696329 2696817 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rsp:RSP_0899 AhpC/TSA family protein; redoxin domain-containing protein complement(2696329..2696817) Rhodobacter sphaeroides ATCC 17029 4895970 YP_001044433.1 CDS Rsph17029_2559 NC_009049.1 2696918 2698123 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_0900 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2696918..2698123 Rhodobacter sphaeroides ATCC 17029 4895988 YP_001044434.1 CDS Rsph17029_2560 NC_009049.1 2698120 2698674 D TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: rsp:RSP_0901 N-6 adenine-specific DNA methylase; putative methyltransferase 2698120..2698674 Rhodobacter sphaeroides ATCC 17029 4895991 YP_001044435.1 CDS Rsph17029_2561 NC_009049.1 2698671 2699315 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_0902 hydrolase, haloacid dehalogenase-like hydrolase; HAD family hydrolase 2698671..2699315 Rhodobacter sphaeroides ATCC 17029 4897397 YP_001044436.1 CDS Rsph17029_2562 NC_009049.1 2699388 2700467 D KEGG: rsp:RSP_0903 catalase; catalase 2699388..2700467 Rhodobacter sphaeroides ATCC 17029 4897519 YP_001044437.1 CDS Rsph17029_2563 NC_009049.1 2700550 2701443 D PFAM: periplasmic solute binding protein; KEGG: rsp:RSP_0904 ABC Mn+2/Fe+2 transporter, periplasmic substrate-binding protein SitA; periplasmic solute binding protein 2700550..2701443 Rhodobacter sphaeroides ATCC 17029 4896155 YP_001044438.1 CDS Rsph17029_2564 NC_009049.1 2701440 2702333 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0905 ABC Mn+2/Fe+2 transporter, ATPase subunit SitB; ABC transporter 2701440..2702333 Rhodobacter sphaeroides ATCC 17029 4896301 YP_001044439.1 CDS Rsph17029_2565 NC_009049.1 2702320 2703180 D PFAM: transport system permease protein; ABC-3 protein; KEGG: rsp:RSP_0906 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitC; ABC-3 protein 2702320..2703180 Rhodobacter sphaeroides ATCC 17029 4896675 YP_001044440.1 CDS Rsph17029_2566 NC_009049.1 2703177 2704025 D PFAM: ABC-3 protein; KEGG: rsp:RSP_0908 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD; ABC-3 protein 2703177..2704025 Rhodobacter sphaeroides ATCC 17029 4897335 YP_001044441.1 CDS Rsph17029_2567 NC_009049.1 2704000 2704608 R PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rsp:RSP_0907 two component transcriptional regulator, LuxR family; response regulator receiver protein complement(2704000..2704608) Rhodobacter sphaeroides ATCC 17029 4896221 YP_001044442.1 CDS Rsph17029_2568 NC_009049.1 2704605 2706590 R KEGG: rsp:RSP_0909 multisensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(2704605..2706590) Rhodobacter sphaeroides ATCC 17029 4897509 YP_001044443.1 CDS Rsph17029_2569 NC_009049.1 2706730 2707734 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_0910 TRAP-T family transporter, C4-dicarboxylate-binding protein DctP; TRAP dicarboxylate transporter subunit DctP 2706730..2707734 Rhodobacter sphaeroides ATCC 17029 4895814 YP_001044444.1 CDS Rsph17029_2570 NC_009049.1 2707820 2708503 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_0911 TRAP-T family C4-dicarboxylate transporter, DctQ (4TMs) subunit; tripartite ATP-independent periplasmic transporter DctQ 2707820..2708503 Rhodobacter sphaeroides ATCC 17029 4896342 YP_001044445.1 CDS Rsph17029_2571 NC_009049.1 2708505 2709830 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_0912 TRAP-T family C4-dicarboxylate transporter, DctM (12TMs) subunit; TRAP dicarboxylate transporter subunit DctM 2708505..2709830 Rhodobacter sphaeroides ATCC 17029 4896362 YP_001044446.1 CDS Rsph17029_2572 NC_009049.1 2709958 2710578 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rsp:RSP_0913 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2709958..2710578) Rhodobacter sphaeroides ATCC 17029 4897789 YP_001044447.1 CDS Rsph17029_2573 NC_009049.1 2710575 2711327 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0914 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2710575..2711327) Rhodobacter sphaeroides ATCC 17029 4897386 YP_001044448.1 CDS Rsph17029_2574 NC_009049.1 2711451 2712980 D KEGG: rsp:RSP_0915 hypothetical protein; hypothetical protein 2711451..2712980 Rhodobacter sphaeroides ATCC 17029 4897480 YP_001044449.1 CDS Rsph17029_2575 NC_009049.1 2713251 2714594 D PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rsp:RSP_0916 putative PmbA/TldD protein invoved in modulation of DNA gyrase; C69 family peptidase 2713251..2714594 Rhodobacter sphaeroides ATCC 17029 4897261 YP_001044450.1 CDS Rsph17029_2576 NC_009049.1 2714581 2715357 D PFAM: inositol monophosphatase; KEGG: rsp:RSP_0917 inositol monophosphatase; inositol monophosphatase 2714581..2715357 Rhodobacter sphaeroides ATCC 17029 4896556 YP_001044451.1 CDS Rsph17029_2577 NC_009049.1 2715605 2715802 R KEGG: rsp:RSP_0918 hypothetical protein; hypothetical protein complement(2715605..2715802) Rhodobacter sphaeroides ATCC 17029 4896553 YP_001044452.1 CDS Rsph17029_2578 NC_009049.1 2715952 2716809 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_0919 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2715952..2716809 Rhodobacter sphaeroides ATCC 17029 4897125 YP_001044453.1 CDS Rsph17029_2579 NC_009049.1 2717073 2718164 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rsp:RSP_0920 biopolymer transport protein, ExbB; MotA/TolQ/ExbB proton channel 2717073..2718164 Rhodobacter sphaeroides ATCC 17029 4896576 YP_001044454.1 CDS Rsph17029_2580 NC_009049.1 2718168 2718593 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rsp:RSP_0921 biopolymer transport protein, ExbD; biopolymer transport protein ExbD/TolR 2718168..2718593 Rhodobacter sphaeroides ATCC 17029 4897666 YP_001044455.1 CDS Rsph17029_2581 NC_009049.1 2718590 2719474 D TIGRFAM: TonB family protein; KEGG: rsp:RSP_0922 putative TonB protein; TonB family protein 2718590..2719474 Rhodobacter sphaeroides ATCC 17029 4897402 YP_001044456.1 CDS Rsph17029_2582 NC_009049.1 2719668 2720549 R KEGG: rsp:RSP_0923 methionine aminopeptidase, subfamily 1; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase complement(2719668..2720549) Rhodobacter sphaeroides ATCC 17029 4896961 YP_001044457.1 CDS Rsph17029_2583 NC_009049.1 2720624 2721355 D PFAM: molybdopterin binding domain; KEGG: rsp:RSP_0924 predicted nucleotide-utilizing enzyme/competence-damage associated protein; molybdopterin binding domain-containing protein 2720624..2721355 Rhodobacter sphaeroides ATCC 17029 4896656 YP_001044458.1 CDS Rsph17029_2584 NC_009049.1 2721359 2722069 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_0925 putative acetyl transferase; N-acetyltransferase GCN5 2721359..2722069 Rhodobacter sphaeroides ATCC 17029 4896778 YP_001044459.1 CDS Rsph17029_2585 NC_009049.1 2722066 2722998 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_0926 OmpA/MotB family protein; OmpA/MotB domain-containing protein 2722066..2722998 Rhodobacter sphaeroides ATCC 17029 4896696 YP_001044460.1 CDS Rsph17029_2586 NC_009049.1 2723021 2723926 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_0927 transcriptional regulator, LyrR family; LysR family transcriptional regulator complement(2723021..2723926) Rhodobacter sphaeroides ATCC 17029 4897194 YP_001044461.1 CDS Rsph17029_2587 NC_009049.1 2724552 2725076 R KEGG: rsp:RSP_0928 hypothetical protein; hypothetical protein complement(2724552..2725076) Rhodobacter sphaeroides ATCC 17029 4896818 YP_001044462.1 CDS Rsph17029_2588 NC_009049.1 2725463 2726416 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rsp:RSP_0929 acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 2725463..2726416 Rhodobacter sphaeroides ATCC 17029 4897212 YP_001044463.1 CDS Rsph17029_2589 NC_009049.1 2726413 2727687 D TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rsp:RSP_0930 folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2726413..2727687 Rhodobacter sphaeroides ATCC 17029 4896753 YP_001044464.1 CDS Rsph17029_2590 NC_009049.1 2727822 2728310 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(2727822..2728310) Rhodobacter sphaeroides ATCC 17029 4896817 YP_001044465.1 CDS Rsph17029_2591 NC_009049.1 2728318 2729664 R KEGG: rsp:RSP_0932 peptidase family S41; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(2728318..2729664) Rhodobacter sphaeroides ATCC 17029 4897635 YP_001044466.1 CDS Rsph17029_2592 NC_009049.1 2729672 2730784 R PFAM: peptidase M23B; KEGG: rsp:RSP_0933 hypothetical protein; peptidase M23B complement(2729672..2730784) Rhodobacter sphaeroides ATCC 17029 4897619 YP_001044467.1 CDS Rsph17029_2593 NC_009049.1 2730781 2732301 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2730781..2732301) Rhodobacter sphaeroides ATCC 17029 4897600 YP_001044468.1 CDS Rsph17029_2594 NC_009049.1 2732332 2733609 R KEGG: rsp:RSP_0935 MiaB-like radical SAM protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme complement(2732332..2733609) Rhodobacter sphaeroides ATCC 17029 4897435 YP_001044469.1 CDS Rsph17029_2595 NC_009049.1 2733606 2734442 R PFAM: diaminopimelate epimerase; KEGG: rsp:RSP_0936 diaminopimelate epimerase; diaminopimelate epimerase complement(2733606..2734442) Rhodobacter sphaeroides ATCC 17029 4896899 YP_001044470.1 CDS Rsph17029_2596 NC_009049.1 2734813 2736489 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rsp:RSP_0937 alpha amylase, catalytic subdomain; alpha amylase 2734813..2736489 Rhodobacter sphaeroides ATCC 17029 4895113 YP_001044471.1 CDS Rsph17029_2597 NC_009049.1 2736583 2736810 D KEGG: rsp:RSP_0938 hypothetical protein; hypothetical protein 2736583..2736810 Rhodobacter sphaeroides ATCC 17029 4896917 YP_001044472.1 CDS Rsph17029_2598 NC_009049.1 2736978 2737787 D PFAM: protein of unknown function DUF72; KEGG: rsp:RSP_0939 hypothetical protein; hypothetical protein 2736978..2737787 Rhodobacter sphaeroides ATCC 17029 4896976 YP_001044473.1 CDS Rsph17029_2599 NC_009049.1 2737936 2738943 D KEGG: rsp:RSP_0940 ABC transporter, periplasmic substrate binding protein; ABC transporter substrate-binding protein 2737936..2738943 Rhodobacter sphaeroides ATCC 17029 4897943 YP_001044474.1 CDS Rsph17029_2600 NC_009049.1 2739001 2739897 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0941 ABC transporter, ATPase subunit; ABC transporter 2739001..2739897 Rhodobacter sphaeroides ATCC 17029 4897043 YP_001044475.1 CDS Rsph17029_2601 NC_009049.1 2739897 2740661 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_0942 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 2739897..2740661 Rhodobacter sphaeroides ATCC 17029 4897039 YP_001044476.1 CDS Rsph17029_2602 NC_009049.1 2740773 2742152 D PFAM: aminotransferase class-III; KEGG: rsp:RSP_0943 probable adenosylmethionine-8-amino-7-oxononanoate aminotransferase; class III aminotransferase 2740773..2742152 Rhodobacter sphaeroides ATCC 17029 4897112 YP_001044477.1 CDS purU NC_009049.1 2742471 2743355 D produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2742471..2743355 Rhodobacter sphaeroides ATCC 17029 4897699 YP_001044478.1 CDS Rsph17029_2604 NC_009049.1 2743426 2745051 R PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rsp:RSP_0945 major facilitator superfamily (MFS) transporter; hypothetical protein complement(2743426..2745051) Rhodobacter sphaeroides ATCC 17029 4897137 YP_001044479.1 CDS Rsph17029_2605 NC_009049.1 2745378 2746385 D KEGG: rsp:RSP_0946 putative DNA topoisomerase I protein; putative DNA topoisomerase I protein 2745378..2746385 Rhodobacter sphaeroides ATCC 17029 4897136 YP_001044480.1 CDS Rsph17029_2606 NC_009049.1 2746520 2746705 R KEGG: rsp:RSP_0947 hypothetical protein; hypothetical protein complement(2746520..2746705) Rhodobacter sphaeroides ATCC 17029 4897164 YP_001044481.1 CDS Rsph17029_2607 NC_009049.1 2746961 2747485 D KEGG: rsp:RSP_6141 hypothetical outer membrane protein; outer membrane protein 2746961..2747485 Rhodobacter sphaeroides ATCC 17029 4897813 YP_001044482.1 CDS Rsph17029_2608 NC_009049.1 2747538 2748950 R KEGG: rsp:RSP_0948 probable OtsA trehalose-6-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase, family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) complement(2747538..2748950) Rhodobacter sphaeroides ATCC 17029 4897190 YP_001044483.1 CDS Rsph17029_2609 NC_009049.1 2748947 2749729 R KEGG: rsp:RSP_0949 putative trehalose-6-phosphate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase complement(2748947..2749729) Rhodobacter sphaeroides ATCC 17029 4897229 YP_001044484.1 CDS Rsph17029_2610 NC_009049.1 2749899 2751509 R PFAM: peptidase M20; KEGG: rsp:RSP_0950 arginine utilization protein RocB; peptidase M20 complement(2749899..2751509) Rhodobacter sphaeroides ATCC 17029 4897217 YP_001044485.1 CDS Rsph17029_2611 NC_009049.1 2751855 2752076 R KEGG: rsp:RSP_0951 hypothetical protein; hypothetical protein complement(2751855..2752076) Rhodobacter sphaeroides ATCC 17029 4897239 YP_001044486.1 CDS Rsph17029_2612 NC_009049.1 2752108 2752992 R PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_0952 transglutaminase-like protein; transglutaminase domain-containing protein complement(2752108..2752992) Rhodobacter sphaeroides ATCC 17029 4897294 YP_001044487.1 CDS Rsph17029_2613 NC_009049.1 2752993 2755377 R PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rsp:RSP_0953 hypothetical protein; hypothetical protein complement(2752993..2755377) Rhodobacter sphaeroides ATCC 17029 4897578 YP_001044488.1 CDS Rsph17029_2614 NC_009049.1 2755377 2758700 R PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rsp:RSP_0954 transglutaminase-like domain; transglutaminase domain-containing protein complement(2755377..2758700) Rhodobacter sphaeroides ATCC 17029 4897377 YP_001044489.1 CDS Rsph17029_2615 NC_009049.1 2758923 2760494 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rsp:RSP_0955 5'-nucleotidase; 5'-nucleotidase domain-containing protein complement(2758923..2760494) Rhodobacter sphaeroides ATCC 17029 4897359 YP_001044490.1 CDS Rsph17029_2616 NC_009049.1 2760653 2760991 D PFAM: protein of unknown function DUF952; KEGG: rsp:RSP_0956 hypothetical protein; hypothetical protein 2760653..2760991 Rhodobacter sphaeroides ATCC 17029 4897438 YP_001044491.1 CDS Rsph17029_2617 NC_009049.1 2760988 2762052 D catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2760988..2762052 Rhodobacter sphaeroides ATCC 17029 4897375 YP_001044492.1 CDS Rsph17029_2618 NC_009049.1 2762227 2762463 R PFAM: regulatory protein, AsnC/Lrp family; KEGG: rsp:RSP_0958 RAM domain protein; AsnC family transcriptional regulator complement(2762227..2762463) Rhodobacter sphaeroides ATCC 17029 4897371 YP_001044493.1 CDS Rsph17029_2619 NC_009049.1 2762757 2764457 R SMART: AAA ATPase; KEGG: rsp:RSP_0959 ATPase; ATPase AAA complement(2762757..2764457) Rhodobacter sphaeroides ATCC 17029 4897389 YP_001044494.1 CDS Rsph17029_2620 NC_009049.1 2764674 2765966 R TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_0960 alcohol dehydrogenase; crotonyl-CoA reductase complement(2764674..2765966) Rhodobacter sphaeroides ATCC 17029 4897380 YP_001044495.1 CDS Rsph17029_2621 NC_009049.1 2766338 2768296 D KEGG: rsp:RSP_0961 similiar to methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 2766338..2768296 Rhodobacter sphaeroides ATCC 17029 4897420 YP_001044496.1 CDS Rsph17029_2622 NC_009049.1 2768497 2769885 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; KEGG: rsp:RSP_0962 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2768497..2769885) Rhodobacter sphaeroides ATCC 17029 4897434 YP_001044497.1 CDS Rsph17029_2623 NC_009049.1 2770000 2770395 R KEGG: rsp:RSP_0963 inner membrane protein; inner membrane protein complement(2770000..2770395) Rhodobacter sphaeroides ATCC 17029 4897414 YP_001044498.1 CDS Rsph17029_2624 NC_009049.1 2770451 2771980 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rsp:RSP_0964 dihydrolipoamide acetyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(2770451..2771980) Rhodobacter sphaeroides ATCC 17029 4897462 YP_001044499.1 CDS sucA NC_009049.1 2771983 2774946 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2771983..2774946) Rhodobacter sphaeroides ATCC 17029 4897461 YP_001044500.1 CDS Rsph17029_2626 NC_009049.1 2775001 2775885 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rsp:RSP_0966 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(2775001..2775885) Rhodobacter sphaeroides ATCC 17029 4897466 YP_001044501.1 CDS sucC NC_009049.1 2775890 2777083 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(2775890..2777083) Rhodobacter sphaeroides ATCC 17029 4897491 YP_001044502.1 CDS Rsph17029_2628 NC_009049.1 2777313 2778275 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(2777313..2778275) Rhodobacter sphaeroides ATCC 17029 4897511 YP_001044503.1 CDS Rsph17029_2629 NC_009049.1 2778478 2779215 D PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_0969 putative integral membrane protein; hypothetical protein 2778478..2779215 Rhodobacter sphaeroides ATCC 17029 4897545 YP_001044504.1 CDS Rsph17029_2630 NC_009049.1 2779302 2780159 D PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_0970 putative citrate lyase beta chain; citrate (pro-3S)-lyase 2779302..2780159 Rhodobacter sphaeroides ATCC 17029 4897538 YP_001044505.1 CDS Rsph17029_2631 NC_009049.1 2780168 2780722 D PFAM: NnrUfamily protein; KEGG: rsp:RSP_0971 hypothetical protein; NnrU family protein 2780168..2780722 Rhodobacter sphaeroides ATCC 17029 4897590 YP_001044506.1 CDS Rsph17029_2632 NC_009049.1 2780719 2780922 D KEGG: rsp:RSP_0972 hypothetical protein; hypothetical protein 2780719..2780922 Rhodobacter sphaeroides ATCC 17029 4897544 YP_001044507.1 CDS Rsph17029_2633 NC_009049.1 2780923 2781954 D PFAM: MaoC domain protein dehydratase; KEGG: rsp:RSP_0973 MaoC family protein; dehydratase 2780923..2781954 Rhodobacter sphaeroides ATCC 17029 4897605 YP_001044508.1 CDS Rsph17029_2634 NC_009049.1 2782165 2782548 D PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rsp:RSP_0974 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase, cytochrome b subunit 2782165..2782548 Rhodobacter sphaeroides ATCC 17029 4897612 YP_001044509.1 CDS Rsph17029_2635 NC_009049.1 2782560 2782931 D KEGG: rsp:RSP_0975 putative succinate dehydrogenase, hydrophobic membrane anchor protein; putative succinate dehydrogenase, hydrophobic membrane anchor protein 2782560..2782931 Rhodobacter sphaeroides ATCC 17029 4897615 YP_001044510.1 CDS sdhA NC_009049.1 2782943 2784745 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2782943..2784745 Rhodobacter sphaeroides ATCC 17029 4897670 YP_001044511.1 CDS Rsph17029_2637 NC_009049.1 2784745 2785065 D KEGG: rsp:RSP_0977 hypothetical protein; hypothetical protein 2784745..2785065 Rhodobacter sphaeroides ATCC 17029 4897667 YP_001044512.1 CDS Rsph17029_2638 NC_009049.1 2785069 2785347 D KEGG: rsp:RSP_0978 hypothetical protein; hypothetical protein 2785069..2785347 Rhodobacter sphaeroides ATCC 17029 4897695 YP_001044513.1 CDS sdhB NC_009049.1 2785366 2786145 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2785366..2786145 Rhodobacter sphaeroides ATCC 17029 4897534 YP_001044514.1 CDS Rsph17029_2640 NC_009049.1 2786431 2786793 R KEGG: rsp:RSP_6142 hypothetical protein; hypothetical protein complement(2786431..2786793) Rhodobacter sphaeroides ATCC 17029 4896286 YP_001044515.1 CDS Rsph17029_2641 NC_009049.1 2786889 2787539 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_0981 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(2786889..2787539) Rhodobacter sphaeroides ATCC 17029 4896396 YP_001044516.1 CDS Rsph17029_2642 NC_009049.1 2787572 2788258 R PFAM: protein of unknown function DUF45; KEGG: rsp:RSP_0982 zinc metallopeptidase-like protein; hypothetical protein complement(2787572..2788258) Rhodobacter sphaeroides ATCC 17029 4897648 YP_001044517.1 CDS Rsph17029_2643 NC_009049.1 2788370 2788750 D KEGG: rsp:RSP_0983 hypothetical protein; hypothetical protein 2788370..2788750 Rhodobacter sphaeroides ATCC 17029 4895241 YP_001044518.1 CDS Rsph17029_2644 NC_009049.1 2789207 2789461 D PFAM: 17 kDa surface antigen; KEGG: rsp:RSP_6143 hypothetical protein; 17 kDa surface antigen 2789207..2789461 Rhodobacter sphaeroides ATCC 17029 4895944 YP_001044519.1 CDS Rsph17029_2645 NC_009049.1 2789528 2791225 R KEGG: rsp:RSP_0985 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; adenine deaminase complement(2789528..2791225) Rhodobacter sphaeroides ATCC 17029 4896185 YP_001044520.1 CDS Rsph17029_2646 NC_009049.1 2791360 2792316 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_0987 putative transporter, RarD family, DMT superfamily; hypothetical protein 2791360..2792316 Rhodobacter sphaeroides ATCC 17029 4897626 YP_001044521.1 CDS frcK NC_009049.1 2792313 2792909 R KEGG: rsp:RSP_0986 hypothetical protein; putative fructose transport system kinase complement(2792313..2792909) Rhodobacter sphaeroides ATCC 17029 4897306 YP_001044522.1 CDS Rsph17029_2648 NC_009049.1 2792906 2793682 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_0988 ABC sugar transporter, ATPase subunit; ABC transporter complement(2792906..2793682) Rhodobacter sphaeroides ATCC 17029 4896963 YP_001044523.1 CDS Rsph17029_2649 NC_009049.1 2793682 2794773 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_0989 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(2793682..2794773) Rhodobacter sphaeroides ATCC 17029 4895865 YP_001044524.1 CDS Rsph17029_2650 NC_009049.1 2794948 2795970 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_0990 ABC sugar transporter, periplasmic sugar binding subunit; periplasmic binding protein/LacI transcriptional regulator complement(2794948..2795970) Rhodobacter sphaeroides ATCC 17029 4896749 YP_001044525.1 CDS Rsph17029_2651 NC_009049.1 2796168 2797391 D PFAM: ROK family protein; KEGG: rsp:RSP_0991 putative transcriptional regulator, ROK family; ROK family protein 2796168..2797391 Rhodobacter sphaeroides ATCC 17029 4897243 YP_001044526.1 CDS Rsph17029_2652 NC_009049.1 2797516 2800365 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 2797516..2800365 Rhodobacter sphaeroides ATCC 17029 4897557 YP_001044527.1 CDS Rsph17029_2653 NC_009049.1 2800365 2800700 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 2800365..2800700 Rhodobacter sphaeroides ATCC 17029 4897422 YP_001044528.1 CDS Rsph17029_2654 NC_009049.1 2800697 2802208 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 2800697..2802208 Rhodobacter sphaeroides ATCC 17029 4897608 YP_001044529.1 CDS Rsph17029_2655 NC_009049.1 2802205 2802696 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 2802205..2802696 Rhodobacter sphaeroides ATCC 17029 4898061 YP_001044530.1 CDS Rsph17029_2656 NC_009049.1 2802693 2802962 D PFAM: multiple resistance and pH regulation protein F; KEGG: rsp:RSP_0996 pH adaption potassium efflux system, PhaF subunit; multiple resistance and pH regulation protein F 2802693..2802962 Rhodobacter sphaeroides ATCC 17029 4898023 YP_001044531.1 CDS Rsph17029_2657 NC_009049.1 2802968 2803354 D TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rsp:RSP_0997 pH adaption potassium efflux system, PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2802968..2803354 Rhodobacter sphaeroides ATCC 17029 4896791 YP_001044532.1 CDS Rsph17029_2658 NC_009049.1 2803488 2804786 D PFAM: Citrate transporter; KEGG: rsp:RSP_0998 Na+/H+ antiporter, NhaD; citrate transporter 2803488..2804786 Rhodobacter sphaeroides ATCC 17029 4897526 YP_001044533.1 CDS Rsph17029_2659 NC_009049.1 2804836 2805390 R PFAM: protein of unknown function DUF179; KEGG: rsp:RSP_0999 hypothetical protein; hypothetical protein complement(2804836..2805390) Rhodobacter sphaeroides ATCC 17029 4896551 YP_001044534.1 CDS Rsph17029_2660 NC_009049.1 2805529 2806326 D KEGG: rsp:RSP_1000 hypothetical protein; hypothetical protein 2805529..2806326 Rhodobacter sphaeroides ATCC 17029 4896245 YP_001044535.1 CDS Rsph17029_2661 NC_009049.1 2806504 2807286 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rsp:RSP_1001 putative DNA polymerase bacteriophage-type; phage SPO1 DNA polymerase-related protein complement(2806504..2807286) Rhodobacter sphaeroides ATCC 17029 4898087 YP_001044536.1 CDS pyrB NC_009049.1 2807403 2808365 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2807403..2808365 Rhodobacter sphaeroides ATCC 17029 4896579 YP_001044537.1 CDS Rsph17029_2663 NC_009049.1 2808362 2809639 D TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: rsp:RSP_1003 dihydroorotase and related cyclic amidohydrolase; dihydroorotase, multifunctional complex type 2808362..2809639 Rhodobacter sphaeroides ATCC 17029 4897988 YP_001044538.1 CDS Rsph17029_2664 NC_009049.1 2809862 2810467 D PFAM: protein of unknown function DUF205; KEGG: rsp:RSP_1004 hypothetical protein; hypothetical protein 2809862..2810467 Rhodobacter sphaeroides ATCC 17029 4896063 YP_001044539.1 CDS Rsph17029_2665 NC_009049.1 2810571 2811935 R TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rsp:RSP_1005 putative glutathione synthetase; glutamate--cysteine ligase complement(2810571..2811935) Rhodobacter sphaeroides ATCC 17029 4897983 YP_001044540.1 CDS Rsph17029_2666 NC_009049.1 2811988 2812554 R KEGG: rsp:RSP_1006 hypothetical protein; hypothetical protein complement(2811988..2812554) Rhodobacter sphaeroides ATCC 17029 4897052 YP_001044541.1 CDS Rsph17029_2667 NC_009049.1 2812551 2813324 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(2812551..2813324) Rhodobacter sphaeroides ATCC 17029 4896290 YP_001044542.1 CDS ubiA NC_009049.1 2813336 2814337 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 2813336..2814337 Rhodobacter sphaeroides ATCC 17029 4896472 YP_001044543.1 CDS Rsph17029_2669 NC_009049.1 2814407 2816365 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1009 possible outer membrane protein, OmpA family / putative chemotaxis MotB protein; OmpA/MotB domain-containing protein 2814407..2816365 Rhodobacter sphaeroides ATCC 17029 4897573 YP_001044544.1 CDS Rsph17029_2670 NC_009049.1 2816485 2816808 D KEGG: rsp:RSP_1011 hypothetical protein; hypothetical protein 2816485..2816808 Rhodobacter sphaeroides ATCC 17029 4895634 YP_001044545.1 CDS Rsph17029_2671 NC_009049.1 2816795 2817649 R KEGG: rsp:RSP_1010 possible esterase/lipase/thioesterase; putative esterase/lipase/thioesterase complement(2816795..2817649) Rhodobacter sphaeroides ATCC 17029 4895197 YP_001044546.1 CDS Rsph17029_2672 NC_009049.1 2817736 2819214 D KEGG: rsp:RSP_1012 succinate-semialdehyde dehdyrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 2817736..2819214 Rhodobacter sphaeroides ATCC 17029 4897069 YP_001044547.1 CDS Rsph17029_2673 NC_009049.1 2819279 2820553 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rsp:RSP_1013 possible hemolysin; hypothetical protein 2819279..2820553 Rhodobacter sphaeroides ATCC 17029 4895290 YP_001044548.1 CDS Rsph17029_2674 NC_009049.1 2820596 2821135 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rsp:RSP_1014 sigma24; ECF subfamily RNA polymerase sigma-24 factor 2820596..2821135 Rhodobacter sphaeroides ATCC 17029 4895345 YP_001044549.1 CDS Rsph17029_2675 NC_009049.1 2821132 2823087 D PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_1015 putative membrane protein with von Willebrand (VWA) domain; von Willebrand factor type A domain-containing protein 2821132..2823087 Rhodobacter sphaeroides ATCC 17029 4897513 YP_001044550.1 CDS Rsph17029_2676 NC_009049.1 2823340 2823816 R PFAM: heat shock protein Hsp20; KEGG: rsp:RSP_1016 small heat shock protein; heat shock protein Hsp20 complement(2823340..2823816) Rhodobacter sphaeroides ATCC 17029 4896620 YP_001044551.1 CDS Rsph17029_2677 NC_009049.1 2824108 2824908 R PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: rsp:RSP_1017 hypothetical protein; peptidase S1 and S6, chymotrypsin/Hap complement(2824108..2824908) Rhodobacter sphaeroides ATCC 17029 4896558 YP_001044552.1 CDS Rsph17029_2678 NC_009049.1 2824966 2826267 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rsp:RSP_1018 glycolate oxidase iron-sulfur subunit; hypothetical protein complement(2824966..2826267) Rhodobacter sphaeroides ATCC 17029 4897987 YP_001044553.1 CDS Rsph17029_2679 NC_009049.1 2826280 2827356 R PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1019 putative glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein complement(2826280..2827356) Rhodobacter sphaeroides ATCC 17029 4897506 YP_001044554.1 CDS Rsph17029_2680 NC_009049.1 2827421 2828854 R PFAM: FAD linked oxidase domain protein; KEGG: rsp:RSP_1020 putative glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein complement(2827421..2828854) Rhodobacter sphaeroides ATCC 17029 4896740 YP_001044555.1 CDS Rsph17029_2681 NC_009049.1 2828936 2829691 D PFAM: protein of unknown function DUF599; KEGG: rsp:RSP_1021 hypothetical protein; hypothetical protein 2828936..2829691 Rhodobacter sphaeroides ATCC 17029 4896213 YP_001044556.1 CDS Rsph17029_2682 NC_009049.1 2829694 2831757 R KEGG: rsp:RSP_6144 conserved hypothetical protein (possible transmembrane); hypothetical protein complement(2829694..2831757) Rhodobacter sphaeroides ATCC 17029 4897376 YP_001044557.1 CDS Rsph17029_2683 NC_009049.1 2831754 2834531 R TIGRFAM: conserved hypothetical membrane protein; KEGG: rsp:RSP_1022 conserved hypothetical protein (possibly transmembrane); hypothetical protein complement(2831754..2834531) Rhodobacter sphaeroides ATCC 17029 4897251 YP_001044558.1 CDS Rsph17029_2684 NC_009049.1 2834531 2835403 R KEGG: rsp:RSP_1023 hypothetical protein; hypothetical protein complement(2834531..2835403) Rhodobacter sphaeroides ATCC 17029 4897178 YP_001044559.1 CDS Rsph17029_2685 NC_009049.1 2835400 2836416 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: rsp:RSP_1024 putative MoxR family protein; ATPase complement(2835400..2836416) Rhodobacter sphaeroides ATCC 17029 4897395 YP_001044560.1 CDS Rsph17029_2686 NC_009049.1 2836499 2837065 D PFAM: protein of unknown function DUF1285; KEGG: rsp:RSP_1025 hypothetical protein; hypothetical protein 2836499..2837065 Rhodobacter sphaeroides ATCC 17029 4898054 YP_001044561.1 CDS Rsph17029_2687 NC_009049.1 2837062 2837286 D KEGG: rsp:RSP_1026 hypothetical protein; hypothetical protein 2837062..2837286 Rhodobacter sphaeroides ATCC 17029 4896188 YP_001044562.1 CDS Rsph17029_2688 NC_009049.1 2837385 2837564 D KEGG: rsp:RSP_1027 hypothetical protein; hypothetical protein 2837385..2837564 Rhodobacter sphaeroides ATCC 17029 4897592 YP_001044563.1 CDS Rsph17029_2689 NC_009049.1 2837611 2840424 D has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 2837611..2840424 Rhodobacter sphaeroides ATCC 17029 4896469 YP_001044564.1 CDS Rsph17029_2690 NC_009049.1 2840552 2840935 R PFAM: histidine triad (HIT) protein; KEGG: rsp:RSP_1029 possible histidine triad (HIT) protein; histidine triad (HIT) protein complement(2840552..2840935) Rhodobacter sphaeroides ATCC 17029 4897062 YP_001044565.1 CDS Rsph17029_2691 NC_009049.1 2841396 2842388 R PFAM: PfkB domain protein; KEGG: rsp:RSP_1030 putative PfkB family carbohydrate kinase; ribokinase-like domain-containing protein complement(2841396..2842388) Rhodobacter sphaeroides ATCC 17029 4895221 YP_001044566.1 CDS Rsph17029_2692 NC_009049.1 2842385 2843029 R KEGG: rsp:RSP_1031 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III complement(2842385..2843029) Rhodobacter sphaeroides ATCC 17029 4895405 YP_001044567.1 CDS Rsph17029_2693 NC_009049.1 2843142 2843990 D TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein, AraC type; methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rsp:RSP_1032 possible O6-methylguanine-DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2843142..2843990 Rhodobacter sphaeroides ATCC 17029 4895419 YP_001044568.1 CDS Rsph17029_2694 NC_009049.1 2844105 2844791 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1033 OmpA family protein; OmpA/MotB domain-containing protein 2844105..2844791 Rhodobacter sphaeroides ATCC 17029 4895441 YP_001044569.1 CDS Rsph17029_2695 NC_009049.1 2845032 2845799 D PFAM: regulatory protein GntR, HTH; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_1034 pyruvate dehydrogenase complex repressor; GntR family transcriptional regulator 2845032..2845799 Rhodobacter sphaeroides ATCC 17029 4895467 YP_001044570.1 CDS Rsph17029_2696 NC_009049.1 2846029 2846583 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(2846029..2846583) Rhodobacter sphaeroides ATCC 17029 4895530 YP_001044571.1 CDS Rsph17029_2697 NC_009049.1 2846589 2847131 R produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' complement(2846589..2847131) Rhodobacter sphaeroides ATCC 17029 4895655 YP_001044572.1 CDS Rsph17029_2698 NC_009049.1 2847201 2847416 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2847201..2847416) Rhodobacter sphaeroides ATCC 17029 4896157 YP_001044573.1 CDS Rsph17029_2699 NC_009049.1 2847490 2848275 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2847490..2848275) Rhodobacter sphaeroides ATCC 17029 4896373 YP_001044574.1 CDS Rsph17029_2700 NC_009049.1 2848279 2848614 R KEGG: rsp:RSP_1039 FoF1 ATP synthase, subunit I; FoF1 ATP synthase subunit I complement(2848279..2848614) Rhodobacter sphaeroides ATCC 17029 4896404 YP_001044575.1 CDS Rsph17029_2701 NC_009049.1 2848822 2849175 D PFAM: regulatory protein, ArsR; KEGG: rsp:RSP_1040 transcriptional regulator, ArsR family; regulatory protein ArsR 2848822..2849175 Rhodobacter sphaeroides ATCC 17029 4896443 YP_001044576.1 CDS Rsph17029_2702 NC_009049.1 2849210 2850715 R catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase complement(2849210..2850715) Rhodobacter sphaeroides ATCC 17029 4896893 YP_001044577.1 CDS Rsph17029_2703 NC_009049.1 2850743 2851552 R KEGG: rsp:RSP_1042 chromosome partitioning protein; chromosome partitioning protein complement(2850743..2851552) Rhodobacter sphaeroides ATCC 17029 4896935 YP_001044578.1 CDS rpmE NC_009049.1 2851761 2851982 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(2851761..2851982) Rhodobacter sphaeroides ATCC 17029 4897126 YP_001044579.1 CDS rplS NC_009049.1 2851995 2852369 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2851995..2852369) Rhodobacter sphaeroides ATCC 17029 4897174 YP_001044580.1 CDS trmD NC_009049.1 2852418 2853254 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2852418..2853254) Rhodobacter sphaeroides ATCC 17029 4897643 YP_001044581.1 CDS Rsph17029_2707 NC_009049.1 2853313 2854179 R KEGG: rsp:RSP_1046 hypothetical protein; hypothetical protein complement(2853313..2854179) Rhodobacter sphaeroides ATCC 17029 4897617 YP_001044582.1 CDS rimM NC_009049.1 2854333 2854842 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2854333..2854842) Rhodobacter sphaeroides ATCC 17029 4897837 YP_001044583.1 CDS rpsP NC_009049.1 2854943 2855293 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2854943..2855293) Rhodobacter sphaeroides ATCC 17029 4895569 YP_001044584.1 CDS Rsph17029_2710 NC_009049.1 2855333 2855632 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(2855333..2855632) Rhodobacter sphaeroides ATCC 17029 4896514 YP_001044585.1 CDS Rsph17029_2711 NC_009049.1 2855671 2856231 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1050 acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(2855671..2856231) Rhodobacter sphaeroides ATCC 17029 4897991 YP_001044586.1 CDS Rsph17029_2712 NC_009049.1 2856228 2856758 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1051 hypothetical protein; N-acetyltransferase GCN5 complement(2856228..2856758) Rhodobacter sphaeroides ATCC 17029 4895277 YP_001044587.1 CDS Rsph17029_2713 NC_009049.1 2856755 2857291 R KEGG: rsp:RSP_1052 possible acetyltransferase; putative acetyltransferase complement(2856755..2857291) Rhodobacter sphaeroides ATCC 17029 4895637 YP_001044588.1 CDS Rsph17029_2714 NC_009049.1 2857368 2858885 R KEGG: rsp:RSP_1053 signal recognition particle protein ffh; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(2857368..2858885) Rhodobacter sphaeroides ATCC 17029 4896727 YP_001044589.1 CDS Rsph17029_2715 NC_009049.1 2859166 2859666 R KEGG: rsp:RSP_6230 hypothetical protein; hypothetical protein complement(2859166..2859666) Rhodobacter sphaeroides ATCC 17029 4895683 YP_001044590.1 CDS Rsph17029_2716 NC_009049.1 2859880 2860758 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1055 transcriptional regulator, LysR family; LysR family transcriptional regulator 2859880..2860758 Rhodobacter sphaeroides ATCC 17029 4895593 YP_001044591.1 CDS Rsph17029_2717 NC_009049.1 2861269 2862669 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_1056 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(2861269..2862669) Rhodobacter sphaeroides ATCC 17029 4896964 YP_001044592.1 CDS Rsph17029_2718 NC_009049.1 2862727 2864139 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rsp:RSP_1057 putative mercuric reductase protein; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit complement(2862727..2864139) Rhodobacter sphaeroides ATCC 17029 4896922 YP_001044593.1 CDS Rsph17029_2719 NC_009049.1 2864140 2864856 R KEGG: rsp:RSP_1058 hypothetical transmemebrane protein; hypothetical protein complement(2864140..2864856) Rhodobacter sphaeroides ATCC 17029 4896996 YP_001044594.1 CDS rpmH NC_009049.1 2865050 2865184 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 2865050..2865184 Rhodobacter sphaeroides ATCC 17029 4897081 YP_001044595.1 CDS Rsph17029_2721 NC_009049.1 2865207 2865620 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rsp:RSP_1060 ribonuclease P protein component; ribonuclease P protein component 2865207..2865620 Rhodobacter sphaeroides ATCC 17029 4897607 YP_001044596.1 CDS Rsph17029_2722 NC_009049.1 2865617 2865871 D PFAM: protein of unknown function DUF37; KEGG: rsp:RSP_1061 hypothetical protein; hypothetical protein 2865617..2865871 Rhodobacter sphaeroides ATCC 17029 4898019 YP_001044597.1 CDS Rsph17029_2723 NC_009049.1 2865898 2866776 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2865898..2866776 Rhodobacter sphaeroides ATCC 17029 4898011 YP_001044598.1 CDS Rsph17029_2724 NC_009049.1 2866849 2868375 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rsp:RSP_1063 putative cyclic-diGMP cyclase/phophodiesterase; diguanylate cyclase/phosphodiesterase 2866849..2868375 Rhodobacter sphaeroides ATCC 17029 4898040 YP_001044599.1 CDS Rsph17029_2725 NC_009049.1 2868485 2870356 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 2868485..2870356 Rhodobacter sphaeroides ATCC 17029 4896272 YP_001044600.1 CDS Rsph17029_2726 NC_009049.1 2870353 2871096 D PFAM: MOSC domain containing protein; KEGG: rsp:RSP_1065 hypothetical protein; MOSC domain-containing protein 2870353..2871096 Rhodobacter sphaeroides ATCC 17029 4897460 YP_001044601.1 CDS engB NC_009049.1 2871093 2871746 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2871093..2871746 Rhodobacter sphaeroides ATCC 17029 4896400 YP_001044602.1 CDS Rsph17029_2728 NC_009049.1 2871750 2872481 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_1067 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2871750..2872481) Rhodobacter sphaeroides ATCC 17029 4896502 YP_001044603.1 CDS Rsph17029_2729 NC_009049.1 2872614 2873495 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 2872614..2873495 Rhodobacter sphaeroides ATCC 17029 4896519 YP_001044604.1 CDS Rsph17029_2730 NC_009049.1 2873495 2874139 D KEGG: rsp:RSP_1069 hypothetical protein; hypothetical protein 2873495..2874139 Rhodobacter sphaeroides ATCC 17029 4897114 YP_001044605.1 CDS Rsph17029_2731 NC_009049.1 2874136 2874642 D PFAM: Phosphoglycerate mutase; KEGG: rsp:RSP_1070 hypothetical protein; putative phosphohistidine phosphatase, SixA 2874136..2874642 Rhodobacter sphaeroides ATCC 17029 4896527 YP_001044606.1 CDS Rsph17029_2732 NC_009049.1 2874726 2875166 R PFAM: molybdopterin biosynthesis MoaE; KEGG: rsp:RSP_1071 molybdopterin converting factor subunit 2; molybdopterin biosynthesis MoaE complement(2874726..2875166) Rhodobacter sphaeroides ATCC 17029 4898017 YP_001044607.1 CDS Rsph17029_2733 NC_009049.1 2875168 2875416 R TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rsp:RSP_1072 putative molybdopterin MPT converting factor, subunit 1 protein; molybdopterin converting factor subunit 1 complement(2875168..2875416) Rhodobacter sphaeroides ATCC 17029 4896873 YP_001044608.1 CDS Rsph17029_2734 NC_009049.1 2875413 2876078 R TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rsp:RSP_1073 phosphatidylglycerol phosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2875413..2876078) Rhodobacter sphaeroides ATCC 17029 4897110 YP_001044609.1 CDS uvrC NC_009049.1 2876158 2878029 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(2876158..2878029) Rhodobacter sphaeroides ATCC 17029 4897201 YP_001044610.1 CDS Rsph17029_2736 NC_009049.1 2878332 2879105 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1075 short chain dehydrogenase; short chain dehydrogenase complement(2878332..2879105) Rhodobacter sphaeroides ATCC 17029 4895594 YP_001044611.1 CDS Rsph17029_2737 NC_009049.1 2879287 2880084 R PFAM: peptidase S49; KEGG: rsp:RSP_1076 peptidase family S49; peptidase S49 complement(2879287..2880084) Rhodobacter sphaeroides ATCC 17029 4895685 YP_001044612.1 CDS Rsph17029_2738 NC_009049.1 2880558 2881448 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1077 transcriptional regulator, LysR family; LysR family transcriptional regulator 2880558..2881448 Rhodobacter sphaeroides ATCC 17029 4897945 YP_001044613.1 CDS Rsph17029_2739 NC_009049.1 2881549 2882022 D catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 2881549..2882022 Rhodobacter sphaeroides ATCC 17029 4897917 YP_001044614.1 CDS Rsph17029_2740 NC_009049.1 2882019 2883548 D PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_1079 NAD dependent formate dehydrogenase, beta subunit (51 kDa); NADH dehydrogenase (quinone) 2882019..2883548 Rhodobacter sphaeroides ATCC 17029 4897902 YP_001044615.1 CDS Rsph17029_2741 NC_009049.1 2883545 2886427 D TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rsp:RSP_1080 NAD-dependent formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 2883545..2886427 Rhodobacter sphaeroides ATCC 17029 4897707 YP_001044616.1 CDS Rsph17029_2742 NC_009049.1 2886424 2887239 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2886424..2887239 Rhodobacter sphaeroides ATCC 17029 4897262 YP_001044617.1 CDS Rsph17029_2743 NC_009049.1 2887229 2887450 D KEGG: rsp:RSP_1082 NAD-dependent formate dehydrogenase, delta subunit; NAD-dependent formate dehydrogenase subunit delta 2887229..2887450 Rhodobacter sphaeroides ATCC 17029 4896973 YP_001044618.1 CDS Rsph17029_2744 NC_009049.1 2887472 2887681 R KEGG: rsp:RSP_6146 hypothetical protein; hypothetical protein complement(2887472..2887681) Rhodobacter sphaeroides ATCC 17029 4897240 YP_001044619.1 CDS Rsph17029_2745 NC_009049.1 2887899 2889116 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1084 putative glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 2887899..2889116 Rhodobacter sphaeroides ATCC 17029 4897559 YP_001044620.1 CDS Rsph17029_2746 NC_009049.1 2889098 2889799 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1083 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(2889098..2889799) Rhodobacter sphaeroides ATCC 17029 4897520 YP_001044621.1 CDS Rsph17029_2747 NC_009049.1 2890302 2890592 R hypothetical protein complement(2890302..2890592) Rhodobacter sphaeroides ATCC 17029 4896609 YP_001044622.1 CDS Rsph17029_2748 NC_009049.1 2890645 2890890 D SMART: WGR domain protein; KEGG: rsp:RSP_1085 hypothetical protein; WGR domain-containing protein 2890645..2890890 Rhodobacter sphaeroides ATCC 17029 4895523 YP_001044623.1 CDS Rsph17029_2749 NC_009049.1 2890887 2891942 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rsp:RSP_1086 saccharopine dehydrogenase (NAD+, L-lysine forming); NAD(P) transhydrogenase subunit alpha 2890887..2891942 Rhodobacter sphaeroides ATCC 17029 4897977 YP_001044624.1 CDS Rsph17029_2750 NC_009049.1 2891989 2892726 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_1087 short-chain dehydrogenase/reductase family member; short-chain dehydrogenase/reductase SDR complement(2891989..2892726) Rhodobacter sphaeroides ATCC 17029 4897040 YP_001044625.1 CDS Rsph17029_2751 NC_009049.1 2892723 2893283 R KEGG: rsp:RSP_1088 hypothetical protein; hypothetical protein complement(2892723..2893283) Rhodobacter sphaeroides ATCC 17029 4897348 YP_001044626.1 CDS Rsph17029_2752 NC_009049.1 2893287 2894492 R PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_1089 sugar/cation symporter, GPH family; major facilitator superfamily transporter complement(2893287..2894492) Rhodobacter sphaeroides ATCC 17029 4896580 YP_001044627.1 CDS Rsph17029_2753 NC_009049.1 2894489 2895238 R PFAM: protein of unknown function DUF1365; KEGG: rsp:RSP_1090 putative cyclopropane/cyclopropene fatty acid synthesis protein; hypothetical protein complement(2894489..2895238) Rhodobacter sphaeroides ATCC 17029 4897406 YP_001044628.1 CDS Rsph17029_2754 NC_009049.1 2895249 2896541 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rsp:RSP_1091 putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; amine oxidase complement(2895249..2896541) Rhodobacter sphaeroides ATCC 17029 4895099 YP_001044629.1 CDS Rsph17029_2755 NC_009049.1 2896795 2897301 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 2896795..2897301 Rhodobacter sphaeroides ATCC 17029 4897702 YP_001044630.1 CDS Rsph17029_2756 NC_009049.1 2897310 2897951 D TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: rsp:RSP_1093 anti-sigma factor ChrR; anti-ECF sigma factor ChrR 2897310..2897951 Rhodobacter sphaeroides ATCC 17029 4895563 YP_001044631.1 CDS Rsph17029_2757 NC_009049.1 2898007 2899143 R PFAM: protein of unknown function DUF195; KEGG: rsp:RSP_1094 hypothetical protein; hypothetical protein complement(2898007..2899143) Rhodobacter sphaeroides ATCC 17029 4897340 YP_001044632.1 CDS mutL NC_009049.1 2899154 2901004 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(2899154..2901004) Rhodobacter sphaeroides ATCC 17029 4898056 YP_001044633.1 CDS Rsph17029_2759 NC_009049.1 2901090 2902397 R PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1096 putative zinc protease; peptidase M16 domain-containing protein complement(2901090..2902397) Rhodobacter sphaeroides ATCC 17029 4896114 YP_001044634.1 CDS Rsph17029_2760 NC_009049.1 2902394 2903740 R PFAM: peptidase M16 domain protein; KEGG: rsp:RSP_1097 putative zinc protease; peptidase M16 domain-containing protein complement(2902394..2903740) Rhodobacter sphaeroides ATCC 17029 4897344 YP_001044635.1 CDS Rsph17029_2761 NC_009049.1 2903820 2904347 R KEGG: rsp:RSP_1098 hypothetical protein; hypothetical protein complement(2903820..2904347) Rhodobacter sphaeroides ATCC 17029 4897412 YP_001044636.1 CDS Rsph17029_2762 NC_009049.1 2904401 2904958 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(2904401..2904958) Rhodobacter sphaeroides ATCC 17029 4897284 YP_001044637.1 CDS purH NC_009049.1 2904960 2906549 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2904960..2906549) Rhodobacter sphaeroides ATCC 17029 4897104 YP_001044638.1 CDS Rsph17029_2764 NC_009049.1 2906587 2908290 R PFAM: Heparinase II/III family protein; KEGG: rsp:RSP_1101 hypothetical protein; heparinase II/III family protein complement(2906587..2908290) Rhodobacter sphaeroides ATCC 17029 4897256 YP_001044639.1 CDS Rsph17029_2765 NC_009049.1 2908324 2909556 R PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; methyltransferase small; KEGG: rsp:RSP_6147 rRNA methyltransferase RsmB-like; Fmu (Sun) domain-containing protein complement(2908324..2909556) Rhodobacter sphaeroides ATCC 17029 4897046 YP_001044640.1 CDS Rsph17029_2766 NC_009049.1 2909616 2909804 D PFAM: protein of unknown function DUF1674; KEGG: rsp:RSP_1104 hypothetical protein; hypothetical protein 2909616..2909804 Rhodobacter sphaeroides ATCC 17029 4897418 YP_001044641.1 CDS Rsph17029_2767 NC_009049.1 2910017 2910826 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2910017..2910826) Rhodobacter sphaeroides ATCC 17029 4897445 YP_001044642.1 CDS rbfA NC_009049.1 2911073 2911486 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2911073..2911486 Rhodobacter sphaeroides ATCC 17029 4897919 YP_001044643.1 CDS Rsph17029_2769 NC_009049.1 2911476 2912213 D KEGG: rsp:RSP_1107 hypothetical protein; hypothetical protein 2911476..2912213 Rhodobacter sphaeroides ATCC 17029 4895328 YP_001044644.1 CDS truB NC_009049.1 2912281 2913186 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 2912281..2913186 Rhodobacter sphaeroides ATCC 17029 4897790 YP_001044645.1 CDS Rsph17029_2771 NC_009049.1 2913406 2914482 D TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rsp:RSP_1109 cysteine synthase; cysteine synthase A 2913406..2914482 Rhodobacter sphaeroides ATCC 17029 4897881 YP_001044646.1 CDS Rsph17029_2772 NC_009049.1 2914883 2915395 D PFAM: protein of unknown function DUF1643; KEGG: rsp:RSP_1110 hypothetical protein; hypothetical protein 2914883..2915395 Rhodobacter sphaeroides ATCC 17029 4895488 YP_001044647.1 CDS rpsO NC_009049.1 2915636 2915905 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2915636..2915905 Rhodobacter sphaeroides ATCC 17029 4897863 YP_001044648.1 CDS Rsph17029_2774 NC_009049.1 2916086 2918236 D KEGG: rsp:RSP_1112 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 2916086..2918236 Rhodobacter sphaeroides ATCC 17029 4897713 YP_001044649.1 CDS Rsph17029_2775 NC_009049.1 2918558 2919871 R PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_1113 hemolysin-type calcium-binding region; RTX toxin; hemolysin-type calcium-binding protein complement(2918558..2919871) Rhodobacter sphaeroides ATCC 17029 4895329 YP_001044650.1 CDS Rsph17029_2776 NC_009049.1 2920091 2920933 D KEGG: rsp:RSP_1114 hemolysin-type calcium-binding toxin; hemolysin-type calcium-binding toxin 2920091..2920933 Rhodobacter sphaeroides ATCC 17029 4895351 YP_001044651.1 CDS Rsph17029_2777 NC_009049.1 2920994 2923039 D KEGG: rsp:RSP_1115 hypothetical protein; hypothetical protein 2920994..2923039 Rhodobacter sphaeroides ATCC 17029 4895553 YP_001044652.1 CDS Rsph17029_2778 NC_009049.1 2923039 2924280 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1116 glycosyltransferase; group 1 glycosyl transferase 2923039..2924280 Rhodobacter sphaeroides ATCC 17029 4895400 YP_001044653.1 CDS Rsph17029_2779 NC_009049.1 2924277 2926463 D KEGG: rsp:RSP_1117 hypothetical protein; hypothetical protein 2924277..2926463 Rhodobacter sphaeroides ATCC 17029 4895463 YP_001044654.1 CDS Rsph17029_2780 NC_009049.1 2926460 2927737 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_1118 group 1 glycosyltransferase; group 1 glycosyl transferase 2926460..2927737 Rhodobacter sphaeroides ATCC 17029 4895421 YP_001044655.1 CDS Rsph17029_2781 NC_009049.1 2927730 2929451 D KEGG: rsp:RSP_1119 ABC protein exporter, fused ATPase and inner membrane subunits; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2927730..2929451 Rhodobacter sphaeroides ATCC 17029 4895512 YP_001044656.1 CDS Rsph17029_2782 NC_009049.1 2929448 2930749 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_1120 protein secretion protein, HlyD family, membrane fusion protein; HlyD family type I secretion membrane fusion protein 2929448..2930749 Rhodobacter sphaeroides ATCC 17029 4895534 YP_001044657.1 CDS Rsph17029_2783 NC_009049.1 2930819 2931625 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_1121 acetyl transferase, isoleucine patch superfamily; hexapaptide repeat-containing transferase 2930819..2931625 Rhodobacter sphaeroides ATCC 17029 4895163 YP_001044658.1 CDS Rsph17029_2784 NC_009049.1 2931629 2932216 D KEGG: rsp:RSP_1122 hypothetical protein; hypothetical protein 2931629..2932216 Rhodobacter sphaeroides ATCC 17029 4897750 YP_001044659.1 CDS Rsph17029_2785 NC_009049.1 2932228 2935050 R KEGG: rsp:RSP_1123 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(2932228..2935050) Rhodobacter sphaeroides ATCC 17029 4897841 YP_001044660.1 CDS Rsph17029_2786 NC_009049.1 2935095 2936354 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_1125 membrane bound lytic murein transglycosylase B; lytic murein transglycosylase complement(2935095..2936354) Rhodobacter sphaeroides ATCC 17029 4897410 YP_001044661.1 CDS Rsph17029_2787 NC_009049.1 2936538 2938796 R KEGG: rsp:RSP_1126 exoribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R complement(2936538..2938796) Rhodobacter sphaeroides ATCC 17029 4895885 YP_001044662.1 CDS Rsph17029_2788 NC_009049.1 2938842 2939258 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_1127 acetyltransferase, GNAT family; N-acetyltransferase GCN5 complement(2938842..2939258) Rhodobacter sphaeroides ATCC 17029 4895893 YP_001044663.1 CDS Rsph17029_2789 NC_009049.1 2939255 2940397 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(2939255..2940397) Rhodobacter sphaeroides ATCC 17029 4895892 YP_001044664.1 CDS Rsph17029_2790 NC_009049.1 2940448 2940780 R KEGG: rsp:RSP_1129 hypothetical protein; hypothetical protein complement(2940448..2940780) Rhodobacter sphaeroides ATCC 17029 4897101 YP_001044665.1 CDS Rsph17029_2791 NC_009049.1 2940704 2941522 R KEGG: rsp:RSP_1130 hypothetical membrane protein; hypothetical protein complement(2940704..2941522) Rhodobacter sphaeroides ATCC 17029 4896295 YP_001044666.1 CDS dapD NC_009049.1 2941633 2942457 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(2941633..2942457) Rhodobacter sphaeroides ATCC 17029 4897703 YP_001044667.1 CDS Rsph17029_2793 NC_009049.1 2942542 2943348 D PFAM: conserved hypothetical protein 730; KEGG: rsp:RSP_1132 hypothetical protein; hypothetical protein 2942542..2943348 Rhodobacter sphaeroides ATCC 17029 4896586 YP_001044668.1 CDS Rsph17029_2794 NC_009049.1 2943352 2943810 R KEGG: rsp:RSP_1133 hypothetical protein; hypothetical protein complement(2943352..2943810) Rhodobacter sphaeroides ATCC 17029 4896638 YP_001044669.1 CDS Rsph17029_2795 NC_009049.1 2943973 2945886 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2943973..2945886) Rhodobacter sphaeroides ATCC 17029 4896646 YP_001044670.1 CDS Rsph17029_2796 NC_009049.1 2945896 2946765 R PFAM: Polyprenyl synthetase; KEGG: rsp:RSP_1135 geranylgeranyl pyrophosphate synthetase; polyprenyl synthetase complement(2945896..2946765) Rhodobacter sphaeroides ATCC 17029 4896633 YP_001044671.1 CDS Rsph17029_2797 NC_009049.1 2946762 2947001 R TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: rsp:RSP_1136 exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(2946762..2947001) Rhodobacter sphaeroides ATCC 17029 4896713 YP_001044672.1 CDS Rsph17029_2798 NC_009049.1 2946998 2947972 R PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_1137 histone deacetylase family protein; histone deacetylase superfamily protein complement(2946998..2947972) Rhodobacter sphaeroides ATCC 17029 4896665 YP_001044673.1 CDS Rsph17029_2799 NC_009049.1 2948042 2948740 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1138 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(2948042..2948740) Rhodobacter sphaeroides ATCC 17029 4896718 YP_001044674.1 CDS Rsph17029_2800 NC_009049.1 2948737 2949246 R PFAM: regulatory protein, MarR; KEGG: rsp:RSP_1139 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2948737..2949246) Rhodobacter sphaeroides ATCC 17029 4896709 YP_001044675.1 CDS Rsph17029_2801 NC_009049.1 2949401 2950267 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2949401..2950267 Rhodobacter sphaeroides ATCC 17029 4896767 YP_001044676.1 CDS Rsph17029_2802 NC_009049.1 2950353 2950523 R KEGG: rsp:RSP_1141 hypothetical protein; hypothetical protein complement(2950353..2950523) Rhodobacter sphaeroides ATCC 17029 4896785 YP_001044677.1 CDS Rsph17029_2803 NC_009049.1 2950762 2950998 R KEGG: rsp:RSP_1142 hypothetical membrane protein; hypothetical protein complement(2950762..2950998) Rhodobacter sphaeroides ATCC 17029 4896769 YP_001044678.1 CDS Rsph17029_2804 NC_009049.1 2951026 2952072 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rsp:RSP_1143 4Fe-4S ferredoxin, iron-sulfur cluster binding protein; hypothetical protein complement(2951026..2952072) Rhodobacter sphaeroides ATCC 17029 4896787 YP_001044679.1 CDS Rsph17029_2805 NC_009049.1 2952132 2952809 R PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rsp:RSP_1144 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(2952132..2952809) Rhodobacter sphaeroides ATCC 17029 4896786 YP_001044680.1 CDS Rsph17029_2806 NC_009049.1 2952878 2953618 R TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase, family 51; KEGG: rsp:RSP_1145 peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase complement(2952878..2953618) Rhodobacter sphaeroides ATCC 17029 4896820 YP_001044681.1 CDS Rsph17029_2807 NC_009049.1 2953872 2958410 R PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rsp:RSP_1146 glutamine-pyruvate aminotransferase; glutamate synthase complement(2953872..2958410) Rhodobacter sphaeroides ATCC 17029 4896839 YP_001044682.1 CDS Rsph17029_2808 NC_009049.1 2958414 2958851 R PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_1147 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(2958414..2958851) Rhodobacter sphaeroides ATCC 17029 4896850 YP_001044683.1 CDS Rsph17029_2809 NC_009049.1 2958841 2959575 R KEGG: rsp:RSP_1148 hypothetical protein; hypothetical protein complement(2958841..2959575) Rhodobacter sphaeroides ATCC 17029 4896915 YP_001044684.1 CDS Rsph17029_2810 NC_009049.1 2959665 2961092 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase complement(2959665..2961092) Rhodobacter sphaeroides ATCC 17029 4896913 YP_001044685.1 CDS Rsph17029_2811 NC_009049.1 2961257 2962063 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(2961257..2962063) Rhodobacter sphaeroides ATCC 17029 4897063 YP_001044686.1 CDS Rsph17029_2812 NC_009049.1 2962096 2963082 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: rsp:RSP_1151 NADH-ubiquinone oxidoreductase; NAD-dependent epimerase/dehydratase complement(2962096..2963082) Rhodobacter sphaeroides ATCC 17029 4897068 YP_001044687.1 CDS Rsph17029_2813 NC_009049.1 2963352 2963966 D PFAM: 3'-5' exonuclease; KEGG: rsp:RSP_1152 ribonuclease D; 3'-5' exonuclease 2963352..2963966 Rhodobacter sphaeroides ATCC 17029 4895857 YP_001044688.1 CDS Rsph17029_2814 NC_009049.1 2963947 2964912 D KEGG: rsp:RSP_1153 sugar phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 2963947..2964912 Rhodobacter sphaeroides ATCC 17029 4897092 YP_001044689.1 CDS Rsph17029_2815 NC_009049.1 2964916 2965530 D PFAM: protein of unknown function DUF1239; KEGG: rsp:RSP_1154 hypothetical protein; hypothetical protein 2964916..2965530 Rhodobacter sphaeroides ATCC 17029 4897388 YP_001044690.1 CDS Rsph17029_2816 NC_009049.1 2965554 2966045 D PFAM: OstA family protein; KEGG: rsp:RSP_1155 OstA-like protein; OstA family protein 2965554..2966045 Rhodobacter sphaeroides ATCC 17029 4897072 YP_001044691.1 CDS Rsph17029_2817 NC_009049.1 2966042 2966803 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1156 ABC transporter, ATPase subunit; ABC transporter 2966042..2966803 Rhodobacter sphaeroides ATCC 17029 4897157 YP_001044692.1 CDS Rsph17029_2818 NC_009049.1 2967029 2967604 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rsp:RSP_1157 ribosomal subunit interface protein Y; sigma 54 modulation protein/ribosomal protein S30EA 2967029..2967604 Rhodobacter sphaeroides ATCC 17029 4895316 YP_001044693.1 CDS Rsph17029_2819 NC_009049.1 2967638 2968102 D TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: rsp:RSP_1158 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 2967638..2968102 Rhodobacter sphaeroides ATCC 17029 4897208 YP_001044694.1 CDS Rsph17029_2820 NC_009049.1 2968512 2969405 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rsp:RSP_1159 UDP-glucose pyrophosphate; UTP-glucose-1-phosphate uridylyltransferase GalU complement(2968512..2969405) Rhodobacter sphaeroides ATCC 17029 4897235 YP_001044695.1 CDS Rsph17029_2821 NC_009049.1 2969819 2970616 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(2969819..2970616) Rhodobacter sphaeroides ATCC 17029 4897263 YP_001044696.1 CDS Rsph17029_2822 NC_009049.1 2970651 2971445 R TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: rsp:RSP_1161 3'-phosphadenosine 5'-phosphosulfate 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase complement(2970651..2971445) Rhodobacter sphaeroides ATCC 17029 4897257 YP_001044697.1 CDS Rsph17029_2823 NC_009049.1 2971710 2972324 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 2971710..2972324 Rhodobacter sphaeroides ATCC 17029 4897070 YP_001044698.1 CDS nusA NC_009049.1 2972361 2973968 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2972361..2973968 Rhodobacter sphaeroides ATCC 17029 4897290 YP_001044699.1 CDS Rsph17029_2825 NC_009049.1 2974007 2974615 D PFAM: protein of unknown function DUF448; KEGG: rsp:RSP_1164 hypothetical protein; hypothetical protein 2974007..2974615 Rhodobacter sphaeroides ATCC 17029 4897283 YP_001044700.1 CDS infB NC_009049.1 2974612 2977122 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2974612..2977122 Rhodobacter sphaeroides ATCC 17029 4897399 YP_001044701.1 CDS Rsph17029_2827 NC_009049.1 2977234 2977374 R hypothetical protein complement(2977234..2977374) Rhodobacter sphaeroides ATCC 17029 4897292 YP_001044702.1 CDS Rsph17029_2828 NC_009049.1 2977511 2977909 R TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1166 NTP pyrophosphohydrolase; mutator MutT protein complement(2977511..2977909) Rhodobacter sphaeroides ATCC 17029 4897334 YP_001044703.1 CDS argJ NC_009049.1 2977906 2979243 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(2977906..2979243) Rhodobacter sphaeroides ATCC 17029 4897331 YP_001044704.1 CDS Rsph17029_2830 NC_009049.1 2979266 2980120 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rsp:RSP_1168 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2979266..2980120) Rhodobacter sphaeroides ATCC 17029 4897329 YP_001044705.1 CDS Rsph17029_2831 NC_009049.1 2980320 2983046 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2980320..2983046 Rhodobacter sphaeroides ATCC 17029 4897323 YP_001044706.1 CDS Rsph17029_2832 NC_009049.1 2983161 2984699 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_1170 OmpA family protein; OmpA/MotB domain-containing protein 2983161..2984699 Rhodobacter sphaeroides ATCC 17029 4897341 YP_001044707.1 CDS radC NC_009049.1 2984770 2985441 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(2984770..2985441) Rhodobacter sphaeroides ATCC 17029 4897339 YP_001044708.1 CDS Rsph17029_2834 NC_009049.1 2985709 2986857 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2985709..2986857) Rhodobacter sphaeroides ATCC 17029 4897390 YP_001044709.1 CDS dnaK NC_009049.1 2986930 2988840 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2986930..2988840) Rhodobacter sphaeroides ATCC 17029 4897352 YP_001044710.1 CDS Rsph17029_2836 NC_009049.1 2989052 2990017 R KEGG: rsp:RSP_1174 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase complement(2989052..2990017) Rhodobacter sphaeroides ATCC 17029 4897366 YP_001044711.1 CDS Rsph17029_2837 NC_009049.1 2990079 2990822 D Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2990079..2990822 Rhodobacter sphaeroides ATCC 17029 4897365 YP_001044712.1 CDS Rsph17029_2838 NC_009049.1 2990864 2992165 R catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase complement(2990864..2992165) Rhodobacter sphaeroides ATCC 17029 4897392 YP_001044713.1 CDS Rsph17029_2839 NC_009049.1 2992162 2993598 R TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_1177 xylulose kinase; xylulokinase complement(2992162..2993598) Rhodobacter sphaeroides ATCC 17029 4897391 YP_001044714.1 CDS Rsph17029_2840 NC_009049.1 2993598 2994380 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1178 ABC sugar (xylose) transporter, ATPase subunit; ABC transporter complement(2993598..2994380) Rhodobacter sphaeroides ATCC 17029 4897419 YP_001044715.1 CDS Rsph17029_2841 NC_009049.1 2994377 2995675 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_1179 ABC sugar (xylose) transporter, inner membrane subunit; inner-membrane translocator complement(2994377..2995675) Rhodobacter sphaeroides ATCC 17029 4897411 YP_001044716.1 CDS Rsph17029_2842 NC_009049.1 2995763 2996788 R TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: rsp:RSP_1180 ABC sugar (xylose) transporter, periplasmic binding protein; D-xylose ABC transporter periplasmic substrate-binding protein complement(2995763..2996788) Rhodobacter sphaeroides ATCC 17029 4897432 YP_001044717.1 CDS Rsph17029_2843 NC_009049.1 2996980 2998257 D PFAM: ROK family protein; KEGG: rsp:RSP_1181 xylose operon repressor; ROK family protein 2996980..2998257 Rhodobacter sphaeroides ATCC 17029 4897439 YP_001044718.1 CDS Rsph17029_2844 NC_009049.1 2998446 3000269 D PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rsp:RSP_1182 putative outer membrane protein; surface antigen (D15) 2998446..3000269 Rhodobacter sphaeroides ATCC 17029 4897452 YP_001044719.1 CDS Rsph17029_2845 NC_009049.1 3000269 3004099 D PFAM: protein of unknown function DUF490; KEGG: rsp:RSP_1183 hypothetical protein; hypothetical protein 3000269..3004099 Rhodobacter sphaeroides ATCC 17029 4897454 YP_001044720.1 CDS Rsph17029_2846 NC_009049.1 3004266 3005102 R TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rsp:RSP_1184 ribonuclease BN; putative ribonuclease BN complement(3004266..3005102) Rhodobacter sphaeroides ATCC 17029 4897472 YP_001044721.1 CDS Rsph17029_2847 NC_009049.1 3005177 3005407 R hypothetical protein complement(3005177..3005407) Rhodobacter sphaeroides ATCC 17029 4897465 YP_001044722.1 CDS Rsph17029_2848 NC_009049.1 3005496 3006158 R KEGG: rsp:RSP_1186 hypothetical protein; hypothetical protein complement(3005496..3006158) Rhodobacter sphaeroides ATCC 17029 4897490 YP_001044723.1 CDS Rsph17029_2849 NC_009049.1 3006158 3008326 R PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: rsp:RSP_1187 hypothetical protein; hypothetical protein complement(3006158..3008326) Rhodobacter sphaeroides ATCC 17029 4897423 YP_001044724.1 CDS Rsph17029_2850 NC_009049.1 3008402 3010369 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rsp:RSP_1188 nucleotide sugar epimerase/dehydratase; polysaccharide biosynthesis protein CapD complement(3008402..3010369) Rhodobacter sphaeroides ATCC 17029 4897487 YP_001044725.1 CDS Rsph17029_2851 NC_009049.1 3010436 3011095 R PFAM: sugar transferase; KEGG: rsp:RSP_1189 sugar transferase; sugar transferase complement(3010436..3011095) Rhodobacter sphaeroides ATCC 17029 4897517 YP_001044726.1 CDS Rsph17029_2852 NC_009049.1 3011077 3011910 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rsp:RSP_1190 hypothetical protein; NAD-dependent epimerase/dehydratase complement(3011077..3011910) Rhodobacter sphaeroides ATCC 17029 4897507 YP_001044727.1 CDS Rsph17029_2853 NC_009049.1 3011910 3012353 R PFAM: regulatory protein, MarR; KEGG: rsp:RSP_1191 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(3011910..3012353) Rhodobacter sphaeroides ATCC 17029 4897501 YP_001044728.1 CDS Rsph17029_2854 NC_009049.1 3012353 3013183 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sil:SPO0069 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3012353..3013183) Rhodobacter sphaeroides ATCC 17029 4897537 YP_001044729.1 CDS Rsph17029_2855 NC_009049.1 3013188 3013445 R TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 2; KEGG: rsp:RSP_1194 glutaredoxin; glutaredoxin 3 complement(3013188..3013445) Rhodobacter sphaeroides ATCC 17029 4897522 YP_001044730.1 CDS Rsph17029_2856 NC_009049.1 3013481 3014203 R KEGG: rsp:RSP_1195 competence protein F; competence protein F complement(3013481..3014203) Rhodobacter sphaeroides ATCC 17029 4897533 YP_001044731.1 CDS Rsph17029_2857 NC_009049.1 3014236 3015048 D KEGG: rsp:RSP_1196 SAM-dependent methyltransferase; SAM-dependent methyltransferase 3014236..3015048 Rhodobacter sphaeroides ATCC 17029 4897532 YP_001044732.1 CDS hemH NC_009049.1 3015086 3016219 D protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3015086..3016219 Rhodobacter sphaeroides ATCC 17029 4897575 YP_001044733.1 CDS Rsph17029_2859 NC_009049.1 3016386 3016562 R hypothetical protein complement(3016386..3016562) Rhodobacter sphaeroides ATCC 17029 4897560 YP_001044734.1 CDS Rsph17029_2860 NC_009049.1 3016711 3017313 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_1199 secreted conserved hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3016711..3017313) Rhodobacter sphaeroides ATCC 17029 4897588 YP_001044735.1 CDS Rsph17029_2861 NC_009049.1 3017491 3018030 D PFAM: Allergen V5/Tpx-1 family protein; KEGG: rsp:RSP_1200 hypothetical protein; Allergen V5/Tpx-1 family protein 3017491..3018030 Rhodobacter sphaeroides ATCC 17029 4897587 YP_001044736.1 CDS Rsph17029_2862 NC_009049.1 3018080 3018574 R KEGG: rsp:RSP_1201 hypothetical protein; hypothetical protein complement(3018080..3018574) Rhodobacter sphaeroides ATCC 17029 4897632 YP_001044737.1 CDS Rsph17029_2863 NC_009049.1 3018678 3019892 R KEGG: rsp:RSP_1202 putative RNA SAM-dependent methyltransferase, TrmA family; RNA SAM-dependent methyltransferase complement(3018678..3019892) Rhodobacter sphaeroides ATCC 17029 4897629 YP_001044738.1 CDS Rsph17029_2864 NC_009049.1 3019889 3021733 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1203 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter complement(3019889..3021733) Rhodobacter sphaeroides ATCC 17029 4897611 YP_001044739.1 CDS Rsph17029_2865 NC_009049.1 3021730 3023574 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1204 ABC multidrug efflux pump, fused ATPase and inner membrane subunits; ABC transporter complement(3021730..3023574) Rhodobacter sphaeroides ATCC 17029 4897644 YP_001044740.1 CDS Rsph17029_2866 NC_009049.1 3023637 3024779 R PFAM: Polynucleotide adenylyltransferase region; KEGG: rsp:RSP_1205 poly A polymerase family protein; polynucleotide adenylyltransferase complement(3023637..3024779) Rhodobacter sphaeroides ATCC 17029 4897639 YP_001044741.1 CDS Rsph17029_2867 NC_009049.1 3024776 3025363 R PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1206 putative phosphohydrolase (MutT/NUDIX family protein); NUDIX hydrolase complement(3024776..3025363) Rhodobacter sphaeroides ATCC 17029 4897594 YP_001044742.1 CDS Rsph17029_2868 NC_009049.1 3025356 3026345 R PFAM: Hsp33 protein; KEGG: rsp:RSP_1207 putative HSP33 protein; Hsp33 protein complement(3025356..3026345) Rhodobacter sphaeroides ATCC 17029 4897653 YP_001044743.1 CDS Rsph17029_2869 NC_009049.1 3026418 3026855 D PFAM: NUDIX hydrolase; KEGG: rsp:RSP_1208 NUDIX hydrolase; NUDIX hydrolase 3026418..3026855 Rhodobacter sphaeroides ATCC 17029 4897652 YP_001044744.1 CDS Rsph17029_2870 NC_009049.1 3026883 3028139 R PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rsp:RSP_1210 response regulator receiver protein; response regulator receiver protein complement(3026883..3028139) Rhodobacter sphaeroides ATCC 17029 4897719 YP_001044745.1 CDS Rsph17029_2871 NC_009049.1 3028397 3028654 D PFAM: Hpt domain protein; KEGG: rsp:RSP_6148 putative HPT, histidine phosphotransfer domain; Hpt protein 3028397..3028654 Rhodobacter sphaeroides ATCC 17029 4897681 YP_001044746.1 CDS Rsph17029_2872 NC_009049.1 3028651 3029898 R catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase complement(3028651..3029898) Rhodobacter sphaeroides ATCC 17029 4897901 YP_001044747.1 CDS Rsph17029_2873 NC_009049.1 3030020 3031246 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3030020..3031246 Rhodobacter sphaeroides ATCC 17029 4897689 YP_001044748.1 CDS Rsph17029_2874 NC_009049.1 3031310 3031987 D PFAM: protein of unknown function DUF533; KEGG: rsp:RSP_1213 hypothetical protein; hypothetical protein 3031310..3031987 Rhodobacter sphaeroides ATCC 17029 4897684 YP_001044749.1 CDS Rsph17029_2875 NC_009049.1 3031977 3032687 R KEGG: rsp:RSP_1214 putative branched-chain amino acid aminotransferase; putative branched-chain amino acid aminotransferase complement(3031977..3032687) Rhodobacter sphaeroides ATCC 17029 4897697 YP_001044750.1 CDS Rsph17029_2876 NC_009049.1 3032696 3033595 R PFAM: aminotransferase, class IV; KEGG: rsp:RSP_1215 putative IlvE, branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; aminotransferase, class IV complement(3032696..3033595) Rhodobacter sphaeroides ATCC 17029 4897274 YP_001044751.1 CDS Rsph17029_2877 NC_009049.1 3033662 3034516 R PFAM: PfkB domain protein; KEGG: rsp:RSP_1216 putative RbsK, carbohydrate kinase, ribokinase family; ribokinase-like domain-containing protein complement(3033662..3034516) Rhodobacter sphaeroides ATCC 17029 4897694 YP_001044752.1 CDS Rsph17029_2878 NC_009049.1 3034516 3036771 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(3034516..3036771) Rhodobacter sphaeroides ATCC 17029 4897700 YP_001044753.1 CDS Rsph17029_2879 NC_009049.1 3036888 3039530 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3036888..3039530 Rhodobacter sphaeroides ATCC 17029 4897705 YP_001044754.1 CDS Rsph17029_2880 NC_009049.1 3039641 3040201 R PFAM: GrpE protein; KEGG: rsp:RSP_1219 putative chaperone protein GrpE (heat shock protein); Fis family transcriptional regulator complement(3039641..3040201) Rhodobacter sphaeroides ATCC 17029 4897714 YP_001044755.1 CDS hrcA NC_009049.1 3040207 3041247 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(3040207..3041247) Rhodobacter sphaeroides ATCC 17029 4897839 YP_001044756.1 CDS rph NC_009049.1 3041411 3042124 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3041411..3042124 Rhodobacter sphaeroides ATCC 17029 4897732 YP_001044757.1 CDS Rsph17029_2883 NC_009049.1 3042121 3042732 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3042121..3042732 Rhodobacter sphaeroides ATCC 17029 4897726 YP_001044758.1 CDS Rsph17029_2884 NC_009049.1 3042729 3043103 D PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_1223 putative translation initiation inhibitor, YjgF family / putative endoribonuclease L-PSP; endoribonuclease L-PSP 3042729..3043103 Rhodobacter sphaeroides ATCC 17029 4897725 YP_001044759.1 CDS Rsph17029_2885 NC_009049.1 3043106 3044263 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3043106..3044263 Rhodobacter sphaeroides ATCC 17029 4897735 YP_001044760.1 CDS Rsph17029_2886 NC_009049.1 3044265 3044618 D PFAM: protein of unknown function DUF454; KEGG: rsp:RSP_1226 hypothetical protein; hypothetical protein 3044265..3044618 Rhodobacter sphaeroides ATCC 17029 4897213 YP_001044761.1 CDS Rsph17029_2887 NC_009049.1 3044593 3045483 R TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_1225 ParB-like partition protein; parB-like partition proteins complement(3044593..3045483) Rhodobacter sphaeroides ATCC 17029 4897759 YP_001044762.1 CDS Rsph17029_2888 NC_009049.1 3045495 3046319 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_1227 putative chromosome partitioning protein, ParA; cobyrinic acid a,c-diamide synthase complement(3045495..3046319) Rhodobacter sphaeroides ATCC 17029 4897746 YP_001044763.1 CDS Rsph17029_2889 NC_009049.1 3046312 3046932 R TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: rsp:RSP_1228 putative GidB, glucose inhibited division protein; methyltransferase GidB complement(3046312..3046932) Rhodobacter sphaeroides ATCC 17029 4897775 YP_001044764.1 CDS Rsph17029_2890 NC_009049.1 3046929 3048794 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3046929..3048794) Rhodobacter sphaeroides ATCC 17029 4897864 YP_001044765.1 CDS trmE NC_009049.1 3048806 3050092 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3048806..3050092) Rhodobacter sphaeroides ATCC 17029 4897768 YP_001044766.1 CDS rho NC_009049.1 3050118 3051386 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(3050118..3051386) Rhodobacter sphaeroides ATCC 17029 4897792 YP_001044767.1 CDS Rsph17029_2893 NC_009049.1 3051528 3052025 R PFAM: conserved hypothetical protein 701; KEGG: rsp:RSP_1232 putative integral membrane protein; hypothetical protein complement(3051528..3052025) Rhodobacter sphaeroides ATCC 17029 4897965 YP_001044768.1 CDS Rsph17029_2894 NC_009049.1 3052408 3053001 D PFAM: Maf family protein; KEGG: rsp:RSP_1233 putative Maf/YceF/YhdE family protein; Maf family protein 3052408..3053001 Rhodobacter sphaeroides ATCC 17029 4897852 YP_001044769.1 CDS aroE NC_009049.1 3052998 3053837 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3052998..3053837 Rhodobacter sphaeroides ATCC 17029 4897848 YP_001044770.1 CDS coaE NC_009049.1 3053834 3054427 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3053834..3054427 Rhodobacter sphaeroides ATCC 17029 4897882 YP_001044771.1 CDS Rsph17029_2897 NC_009049.1 3054420 3055109 D KEGG: rsp:RSP_1236 putative DNA polymerase III, epsilon subunit and related 3'-5' exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 3054420..3055109 Rhodobacter sphaeroides ATCC 17029 4897909 YP_001044772.1 CDS Rsph17029_2898 NC_009049.1 3055113 3055613 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(3055113..3055613) Rhodobacter sphaeroides ATCC 17029 4897176 YP_001044773.1 CDS Rsph17029_2899 NC_009049.1 3055674 3056150 R PFAM: FxsA cytoplasmic membrane protein; KEGG: rsp:RSP_1238 putative FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(3055674..3056150) Rhodobacter sphaeroides ATCC 17029 4897883 YP_001044774.1 CDS Rsph17029_2900 NC_009049.1 3056294 3056953 D PFAM: import inner membrane translocase, subunit Tim44; KEGG: rsp:RSP_1239 hypothetical protein; import inner membrane translocase subunit Tim44 3056294..3056953 Rhodobacter sphaeroides ATCC 17029 4897867 YP_001044775.1 CDS Rsph17029_2901 NC_009049.1 3056953 3057978 D PFAM: MltA domain protein; 3D domain protein; KEGG: rsp:RSP_1240 putative membrane-bound lytic murein transglycosylase A transmembrane protein; MltA domain-containing protein 3056953..3057978 Rhodobacter sphaeroides ATCC 17029 4897913 YP_001044776.1 CDS Rsph17029_2902 NC_009049.1 3057978 3058574 D PFAM: Smr protein/MutS2; KEGG: rsp:RSP_1241 putative Smr protein/MutS2; Smr protein/MutS2 3057978..3058574 Rhodobacter sphaeroides ATCC 17029 4897897 YP_001044777.1 CDS Rsph17029_2903 NC_009049.1 3058602 3059015 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_1242 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(3058602..3059015) Rhodobacter sphaeroides ATCC 17029 4897892 YP_001044778.1 CDS Rsph17029_2904 NC_009049.1 3059012 3060031 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1243 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator complement(3059012..3060031) Rhodobacter sphaeroides ATCC 17029 4897947 YP_001044779.1 CDS Rsph17029_2905 NC_009049.1 3060182 3061240 D PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_1244 putative IolE, sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 3060182..3061240 Rhodobacter sphaeroides ATCC 17029 4897946 YP_001044780.1 CDS Rsph17029_2906 NC_009049.1 3061237 3062382 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_1245 predicted oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 3061237..3062382 Rhodobacter sphaeroides ATCC 17029 4897981 YP_001044781.1 CDS Rsph17029_2907 NC_009049.1 3062379 3063878 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1247 ABC sugar transporter, ATPase subunit; ABC transporter 3062379..3063878 Rhodobacter sphaeroides ATCC 17029 4897974 YP_001044782.1 CDS Rsph17029_2908 NC_009049.1 3063875 3064867 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_6150 ABC sugar (ribose) transporter, inner membrane subunit; inner-membrane translocator 3063875..3064867 Rhodobacter sphaeroides ATCC 17029 4897899 YP_001044783.1 CDS Rsph17029_2909 NC_009049.1 3064886 3065848 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_1249 ABC ribose transporter, periplasmic solute-binding protein; periplasmic binding protein/LacI transcriptional regulator 3064886..3065848 Rhodobacter sphaeroides ATCC 17029 4897985 YP_001044784.1 CDS Rsph17029_2910 NC_009049.1 3066377 3066778 D KEGG: rsp:RSP_6151 hypothetical protein; hypothetical protein 3066377..3066778 Rhodobacter sphaeroides ATCC 17029 4897984 YP_001044785.1 CDS Rsph17029_2911 NC_009049.1 3067075 3067353 D hypothetical protein 3067075..3067353 Rhodobacter sphaeroides ATCC 17029 4896990 YP_001044786.1 CDS Rsph17029_2912 NC_009049.1 3067409 3068350 R PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rsp:RSP_1252 2-nitropropane dioxygenase-like protein; 2-nitropropane dioxygenase complement(3067409..3068350) Rhodobacter sphaeroides ATCC 17029 4897771 YP_001044787.1 CDS Rsph17029_2913 NC_009049.1 3068450 3068914 D KEGG: rsp:RSP_1253 hypothetical protein; hypothetical protein 3068450..3068914 Rhodobacter sphaeroides ATCC 17029 4897082 YP_001044788.1 CDS Rsph17029_2914 NC_009049.1 3068995 3070185 R TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rsp:RSP_1254 putative acetate kinase (acetokinase; acetate kinase complement(3068995..3070185) Rhodobacter sphaeroides ATCC 17029 4895868 YP_001044789.1 CDS Rsph17029_2915 NC_009049.1 3070182 3071603 R PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rsp:RSP_1255 phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase complement(3070182..3071603) Rhodobacter sphaeroides ATCC 17029 4896992 YP_001044790.1 CDS Rsph17029_2916 NC_009049.1 3071590 3072348 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(3071590..3072348) Rhodobacter sphaeroides ATCC 17029 4896650 YP_001044791.1 CDS Rsph17029_2917 NC_009049.1 3072361 3074082 R PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rsp:RSP_1257 putative polyhydroxyalkanoic synthase, PHA synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein complement(3072361..3074082) Rhodobacter sphaeroides ATCC 17029 4895147 YP_001044792.1 CDS Rsph17029_2918 NC_009049.1 3074389 3075327 D PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_1258 putative hydrolase; alpha/beta hydrolase 3074389..3075327 Rhodobacter sphaeroides ATCC 17029 4896126 YP_001044793.1 CDS Rsph17029_2919 NC_009049.1 3075409 3075612 D KEGG: rsp:RSP_1259 hypothetical protein; hypothetical protein 3075409..3075612 Rhodobacter sphaeroides ATCC 17029 4895315 YP_001044794.1 CDS Rsph17029_2920 NC_009049.1 3075668 3076129 D KEGG: rsp:RSP_1260 hypothetical protein; hypothetical protein 3075668..3076129 Rhodobacter sphaeroides ATCC 17029 4897878 YP_001044795.1 CDS Rsph17029_2921 NC_009049.1 3076176 3076598 R PFAM: BLUF domain protein; KEGG: rsp:RSP_1261 blue-light receptor of the BLUF-family; BLUF domain-containing protein complement(3076176..3076598) Rhodobacter sphaeroides ATCC 17029 4896337 YP_001044796.1 CDS Rsph17029_2922 NC_009049.1 3076670 3077257 R PFAM: response regulator receiver; KEGG: rsp:RSP_1262 response regulator receiver protein; response regulator receiver/SARP domain-containing protein complement(3076670..3077257) Rhodobacter sphaeroides ATCC 17029 4895376 YP_001044797.1 CDS Rsph17029_2923 NC_009049.1 3078081 3079736 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3078081..3079736 Rhodobacter sphaeroides ATCC 17029 4895294 YP_001044798.1 CDS Rsph17029_2924 NC_009049.1 3079745 3081772 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rsp:RSP_1266 potassium-transporting P-type ATPase, B chain, KdpB; K+-transporting ATPase subunit B 3079745..3081772 Rhodobacter sphaeroides ATCC 17029 4895901 YP_001044799.1 CDS Rsph17029_2925 NC_009049.1 3081785 3082342 D KEGG: rsp:RSP_1267 potassium-transporting P-type ATPase C chain, KdpC; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit; potassium-transporting ATPase subunit C 3081785..3082342 Rhodobacter sphaeroides ATCC 17029 4896052 YP_001044800.1 CDS Rsph17029_2926 NC_009049.1 3082346 3085009 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: rsp:RSP_1268 osmosensitive K+ channel histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 3082346..3085009 Rhodobacter sphaeroides ATCC 17029 4897691 YP_001044801.1 CDS Rsph17029_2927 NC_009049.1 3085006 3085692 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_1269 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3085006..3085692 Rhodobacter sphaeroides ATCC 17029 4897731 YP_001044802.1 CDS Rsph17029_2928 NC_009049.1 3085769 3085966 R PFAM: CsbD family protein; KEGG: rsp:RSP_1270 hypothetical protein; CsbD family protein complement(3085769..3085966) Rhodobacter sphaeroides ATCC 17029 4896795 YP_001044803.1 CDS Rsph17029_2929 NC_009049.1 3086072 3087853 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_1271 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase complement(3086072..3087853) Rhodobacter sphaeroides ATCC 17029 4895934 YP_001044804.1 CDS Rsph17029_2930 NC_009049.1 3087850 3088434 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(3087850..3088434) Rhodobacter sphaeroides ATCC 17029 4895919 YP_001044805.1 CDS Rsph17029_2931 NC_009049.1 3088431 3088637 R KEGG: rsp:RSP_1273 hypothetical protein; hypothetical protein complement(3088431..3088637) Rhodobacter sphaeroides ATCC 17029 4897774 YP_001044806.1 CDS Rsph17029_2932 NC_009049.1 3088740 3089549 D in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3088740..3089549 Rhodobacter sphaeroides ATCC 17029 4897861 YP_001044807.1 CDS Rsph17029_2933 NC_009049.1 3089563 3089922 R KEGG: rsp:RSP_6152 hypothetical protein; hypothetical protein complement(3089563..3089922) Rhodobacter sphaeroides ATCC 17029 4896618 YP_001044808.1 CDS Rsph17029_2934 NC_009049.1 3089997 3090746 D PFAM: cyclic nucleotide-binding; KEGG: rsp:RSP_1275 Crp-Fnr family transciptional regulator; cyclic nucleotide-binding protein 3089997..3090746 Rhodobacter sphaeroides ATCC 17029 4896951 YP_001044809.1 CDS Rsph17029_2935 NC_009049.1 3090844 3091338 D KEGG: rsp:RSP_1276 hypothetical protein; hypothetical protein 3090844..3091338 Rhodobacter sphaeroides ATCC 17029 4896926 YP_001044810.1 CDS Rsph17029_2936 NC_009049.1 3091641 3092897 R PFAM: N-acylglucosamine 2-epimerase; KEGG: rsp:RSP_1277 hypothetical protein; N-acylglucosamine 2-epimerase complement(3091641..3092897) Rhodobacter sphaeroides ATCC 17029 4896072 YP_001044811.1 CDS Rsph17029_2937 NC_009049.1 3092945 3093601 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(3092945..3093601) Rhodobacter sphaeroides ATCC 17029 4896146 YP_001044812.1 CDS Rsph17029_2938 NC_009049.1 3093601 3094293 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rsp:RSP_1279 CbbY family protein; HAD family hydrolase complement(3093601..3094293) Rhodobacter sphaeroides ATCC 17029 4895371 YP_001044813.1 CDS Rsph17029_2939 NC_009049.1 3094290 3095219 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_1280 CbbX protein; ATPase central domain-containing protein complement(3094290..3095219) Rhodobacter sphaeroides ATCC 17029 4896275 YP_001044814.1 CDS Rsph17029_2940 NC_009049.1 3095390 3095779 R PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: rsp:RSP_1281 ribulose bisphosphate carboxylase, small subunit; ribulose-bisphosphate carboxylase complement(3095390..3095779) Rhodobacter sphaeroides ATCC 17029 4896147 YP_001044815.1 CDS rbcL NC_009049.1 3095791 3097251 R type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase complement(3095791..3097251) Rhodobacter sphaeroides ATCC 17029 4896035 YP_001044816.1 CDS Rsph17029_2942 NC_009049.1 3097266 3098345 R class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase complement(3097266..3098345) Rhodobacter sphaeroides ATCC 17029 4895997 YP_001044817.1 CDS Rsph17029_2943 NC_009049.1 3098469 3099341 R PFAM: phosphoribulokinase/uridine kinase; KEGG: rsp:RSP_1284 phosphoribulokinase; phosphoribulokinase complement(3098469..3099341) Rhodobacter sphaeroides ATCC 17029 4896345 YP_001044818.1 CDS Rsph17029_2944 NC_009049.1 3099348 3100349 R PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rsp:RSP_1285 fructose-1,6-bisphosphatase I; inositol phosphatase/fructose-1,6-bisphosphatase complement(3099348..3100349) Rhodobacter sphaeroides ATCC 17029 4896060 YP_001044819.1 CDS Rsph17029_2945 NC_009049.1 3100440 3101372 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1286 RuBisCO operon transcriptional regulator, CbbR; LysR family transcriptional regulator 3100440..3101372 Rhodobacter sphaeroides ATCC 17029 4895382 YP_001044820.1 CDS Rsph17029_2946 NC_009049.1 3101377 3102072 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1287 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter complement(3101377..3102072) Rhodobacter sphaeroides ATCC 17029 4895878 YP_001044821.1 CDS Rsph17029_2947 NC_009049.1 3102074 3102775 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1288 ABC branched chain amino acid family transporter, ATPase subunit; ABC transporter complement(3102074..3102775) Rhodobacter sphaeroides ATCC 17029 4895698 YP_001044822.1 CDS Rsph17029_2948 NC_009049.1 3102772 3103704 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_1289 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(3102772..3103704) Rhodobacter sphaeroides ATCC 17029 4895544 YP_001044823.1 CDS Rsph17029_2949 NC_009049.1 3103701 3104579 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_1290 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator complement(3103701..3104579) Rhodobacter sphaeroides ATCC 17029 4897937 YP_001044824.1 CDS Rsph17029_2950 NC_009049.1 3104582 3105862 R KEGG: rsp:RSP_1291 ABC branched chain amino acid family transporter, periplasmic substrate binding protein; branched chain amino acid ABC transporter substrate-binding protein complement(3104582..3105862) Rhodobacter sphaeroides ATCC 17029 4897728 YP_001044825.1 CDS Rsph17029_2951 NC_009049.1 3106109 3106633 D KEGG: rsp:RSP_6153 hypothetical protein; hypothetical protein 3106109..3106633 Rhodobacter sphaeroides ATCC 17029 4895764 YP_001044826.1 CDS Rsph17029_2952 NC_009049.1 3106617 3108101 R PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_1292 putative aldehyde dehydrogenase; aldehyde dehydrogenase complement(3106617..3108101) Rhodobacter sphaeroides ATCC 17029 4898096 YP_001044827.1 CDS Rsph17029_2953 NC_009049.1 3108098 3109132 R KEGG: rsp:RSP_1293 putative acyl-carrier protein; putative acyl-carrier protein complement(3108098..3109132) Rhodobacter sphaeroides ATCC 17029 4897727 YP_001044828.1 CDS Rsph17029_2954 NC_009049.1 3109129 3111312 R PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: rsp:RSP_1294 possible 2-oxoisovalerate dehydrogenase; E1 component, alpha and beta subunit; transketolase, central region complement(3109129..3111312) Rhodobacter sphaeroides ATCC 17029 4895786 YP_001044829.1 CDS Rsph17029_2955 NC_009049.1 3111388 3112599 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_1295 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3111388..3112599) Rhodobacter sphaeroides ATCC 17029 4897900 YP_001044830.1 CDS Rsph17029_2956 NC_009049.1 3112679 3113593 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_1297 transcriptional regulator, LysR family; LysR family transcriptional regulator 3112679..3113593 Rhodobacter sphaeroides ATCC 17029 4896211 YP_001044831.1 CDS Rsph17029_2957 NC_009049.1 3113565 3114698 R KEGG: rsp:RSP_1296 putative N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(3113565..3114698) Rhodobacter sphaeroides ATCC 17029 4895855 YP_001044832.1 CDS Rsph17029_2958 NC_009049.1 3114820 3116754 D KEGG: rsp:RSP_1299 putative binding domain; SARP family transcriptional regulator 3114820..3116754 Rhodobacter sphaeroides ATCC 17029 4895699 YP_001044833.1 CDS Rsph17029_2959 NC_009049.1 3116782 3117714 D PFAM: phosphoesterase, PA-phosphatase related; KEGG: rsp:RSP_1300 hypothetical protein; PA-phosphatase-like phosphoesterase 3116782..3117714 Rhodobacter sphaeroides ATCC 17029 4895610 YP_001044834.1 CDS Rsph17029_2960 NC_009049.1 3117716 3119386 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: rsp:RSP_1301 putative peptidase; peptidase S8/S53 subtilisin kexin sedolisin 3117716..3119386 Rhodobacter sphaeroides ATCC 17029 4897678 YP_001044835.1 CDS Rsph17029_2961 NC_009049.1 3119517 3120410 D KEGG: rsp:RSP_6154 hypothetical protein; hypothetical protein 3119517..3120410 Rhodobacter sphaeroides ATCC 17029 4895608 YP_001044836.1 CDS Rsph17029_2962 NC_009049.1 3120485 3121321 D KEGG: rsp:RSP_1302 putative chemotaxis MotB protein; putative chemotaxis MotB protein 3120485..3121321 Rhodobacter sphaeroides ATCC 17029 4897766 YP_001044837.1 CDS Rsph17029_2963 NC_009049.1 3121416 3122813 D PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rsp:RSP_1303 putative flagellar hook protein; hypothetical protein 3121416..3122813 Rhodobacter sphaeroides ATCC 17029 4897972 YP_001044838.1 CDS flgK NC_009049.1 3122826 3124271 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 3122826..3124271 Rhodobacter sphaeroides ATCC 17029 4896350 YP_001044839.1 CDS Rsph17029_2965 NC_009049.1 3124272 3125273 D KEGG: rsp:RSP_1305 putative flagellar hook-associated protein; putative flagellar hook-associated protein 3124272..3125273 Rhodobacter sphaeroides ATCC 17029 4895619 YP_001044840.1 CDS flgI NC_009049.1 3125273 3126364 D part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3125273..3126364 Rhodobacter sphaeroides ATCC 17029 4895752 YP_001044841.1 CDS Rsph17029_2967 NC_009049.1 3126340 3129189 R KEGG: rsp:RSP_1306 PAS sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(3126340..3129189) Rhodobacter sphaeroides ATCC 17029 4896308 YP_001044842.1 CDS Rsph17029_2968 NC_009049.1 3129253 3130335 D KEGG: rsp:RSP_1308 hypothetical protein; hypothetical protein 3129253..3130335 Rhodobacter sphaeroides ATCC 17029 4897976 YP_001044843.1 CDS fliP NC_009049.1 3130326 3131042 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(3130326..3131042) Rhodobacter sphaeroides ATCC 17029 4895726 YP_001044844.1 CDS Rsph17029_2970 NC_009049.1 3131042 3131308 R PFAM: surface presentation of antigens (SPOA) protein; KEGG: rsp:RSP_1310 putative flagellar motor switch protein FliN/FliY; surface presentation of antigens (SPOA) protein complement(3131042..3131308) Rhodobacter sphaeroides ATCC 17029 4896024 YP_001044845.1 CDS Rsph17029_2971 NC_009049.1 3131301 3131891 R KEGG: rsp:RSP_1311 putative flagellar biosynthesis/type III secretory pathway protein; putative flagellar biosynthesis/type III secretory pathway protein complement(3131301..3131891) Rhodobacter sphaeroides ATCC 17029 4895375 YP_001044846.1 CDS fliF NC_009049.1 3131891 3133519 R the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein complement(3131891..3133519) Rhodobacter sphaeroides ATCC 17029 4895795 YP_001044847.1 CDS Rsph17029_2973 NC_009049.1 3133589 3134077 D PFAM: flagellar basal body-associated protein FliL; KEGG: rsp:RSP_1313 possible flagellar synthesis protein; flagellar basal body-associated protein FliL 3133589..3134077 Rhodobacter sphaeroides ATCC 17029 4895675 YP_001044848.1 CDS Rsph17029_2974 NC_009049.1 3134081 3134473 D KEGG: rsp:RSP_1314 hypothetical protein; hypothetical protein 3134081..3134473 Rhodobacter sphaeroides ATCC 17029 4895127 YP_001044849.1 CDS Rsph17029_2975 NC_009049.1 3134470 3135027 D KEGG: rsp:RSP_1315 hypothetical protein; hypothetical protein 3134470..3135027 Rhodobacter sphaeroides ATCC 17029 4896262 YP_001044850.1 CDS Rsph17029_2976 NC_009049.1 3135084 3135953 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3135084..3135953 Rhodobacter sphaeroides ATCC 17029 4895819 YP_001044851.1 CDS Rsph17029_2977 NC_009049.1 3135950 3137908 D KEGG: rsp:RSP_1318 hypothetical protein; hypothetical protein 3135950..3137908 Rhodobacter sphaeroides ATCC 17029 4896047 YP_001044852.1 CDS Rsph17029_2978 NC_009049.1 3138205 3138885 D PFAM: Lytic transglycosylase, catalytic; KEGG: rsp:RSP_1319 possible invasion protein; lytic transglycosylase, catalytic 3138205..3138885 Rhodobacter sphaeroides ATCC 17029 4895834 YP_001044853.1 CDS flhA NC_009049.1 3138889 3140955 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3138889..3140955 Rhodobacter sphaeroides ATCC 17029 4897742 YP_001044854.1 CDS Rsph17029_2980 NC_009049.1 3140952 3141734 D PFAM: type III secretion system inner membrane R protein; KEGG: rsp:RSP_1321 flagellar biosynthesis pathway, component FliR; type III secretion system inner membrane R protein 3140952..3141734 Rhodobacter sphaeroides ATCC 17029 4896093 YP_001044855.1 CDS flhB NC_009049.1 3141731 3142810 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 3141731..3142810 Rhodobacter sphaeroides ATCC 17029 4897734 YP_001044856.1 CDS Rsph17029_2982 NC_009049.1 3142807 3143136 D KEGG: rsp:RSP_6155 hypothetical protein; hypothetical protein 3142807..3143136 Rhodobacter sphaeroides ATCC 17029 4897951 YP_001044857.1 CDS Rsph17029_2984 NC_009049.1 3143510 3143701 D hypothetical protein 3143510..3143701 Rhodobacter sphaeroides ATCC 17029 4895985 YP_001044858.1 CDS flgH NC_009049.1 3143685 3144404 R part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein complement(3143685..3144404) Rhodobacter sphaeroides ATCC 17029 4895823 YP_001044859.1 CDS flgA NC_009049.1 3144415 3144834 R required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA complement(3144415..3144834) Rhodobacter sphaeroides ATCC 17029 4897975 YP_001044860.1 CDS flgG NC_009049.1 3144834 3145619 R makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG complement(3144834..3145619) Rhodobacter sphaeroides ATCC 17029 4897073 YP_001044861.1 CDS flgF NC_009049.1 3145616 3146335 R FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Rhodobacter sphaeroides has 2 copies of this and other flagella genes; flagellar basal body rod protein FlgF complement(3145616..3146335) Rhodobacter sphaeroides ATCC 17029 4897730 YP_001044862.1 CDS Rsph17029_2989 NC_009049.1 3146337 3146603 R PFAM: export protein FliQ, family 3; KEGG: rsp:RSP_1328 flagellar biosynthetic protein FliQ; export protein FliQ complement(3146337..3146603) Rhodobacter sphaeroides ATCC 17029 4897745 YP_001044863.1 CDS fliE NC_009049.1 3146603 3146893 R forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE complement(3146603..3146893) Rhodobacter sphaeroides ATCC 17029 4897737 YP_001044864.1 CDS flgC NC_009049.1 3146907 3147287 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(3146907..3147287) Rhodobacter sphaeroides ATCC 17029 4895953 YP_001044865.1 CDS flgB NC_009049.1 3147290 3147673 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB complement(3147290..3147673) Rhodobacter sphaeroides ATCC 17029 4895930 YP_001044866.1 CDS Rsph17029_2993 NC_009050.1 444 941 D TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rsp:RSP_3342 bacterioferritin; bacterioferritin 444..941 Rhodobacter sphaeroides ATCC 17029 4898432 YP_001044867.1 CDS Rsph17029_2994 NC_009050.1 1624 2730 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_3343 putative glycosyl transferase; group 1 glycosyl transferase 1624..2730 Rhodobacter sphaeroides ATCC 17029 4899017 YP_001044868.1 CDS Rsph17029_2995 NC_009050.1 2737 4209 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_3344 PAS sensor diguanylate cyclase; diguanylate cyclase complement(2737..4209) Rhodobacter sphaeroides ATCC 17029 4899018 YP_001044869.1 CDS Rsph17029_2996 NC_009050.1 4526 5770 D PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_3345 hypothetical protein; hypothetical protein 4526..5770 Rhodobacter sphaeroides ATCC 17029 4898353 YP_001044870.1 CDS Rsph17029_2997 NC_009050.1 5780 8506 R KEGG: rsp:RSP_3346 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase, DHPS; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; methionine synthase complement(5780..8506) Rhodobacter sphaeroides ATCC 17029 4898354 YP_001044871.1 CDS Rsph17029_2998 NC_009050.1 8503 9582 R PFAM: homocysteine S-methyltransferase; KEGG: rsp:RSP_3347 methionine synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase complement(8503..9582) Rhodobacter sphaeroides ATCC 17029 4898355 YP_001044872.1 CDS Rsph17029_2999 NC_009050.1 9857 10735 D KEGG: rsp:RSP_3349 hypothetical protein; hypothetical protein 9857..10735 Rhodobacter sphaeroides ATCC 17029 4899149 YP_001044873.1 CDS Rsph17029_3000 NC_009050.1 10732 11775 D KEGG: rsp:RSP_3350 lipocalin-related protein; lipocalin-related protein 10732..11775 Rhodobacter sphaeroides ATCC 17029 4899150 YP_001044874.1 CDS Rsph17029_3001 NC_009050.1 12127 12360 D KEGG: rsp:RSP_3351 hypothetical protein; hypothetical protein 12127..12360 Rhodobacter sphaeroides ATCC 17029 4899151 YP_001044875.1 CDS Rsph17029_3003 NC_009050.1 12750 13724 D PFAM: phage late control D family protein; KEGG: rsp:RSP_3359 phage tail protein D; phage late control D family protein 12750..13724 Rhodobacter sphaeroides ATCC 17029 4898890 YP_001044876.1 CDS Rsph17029_3004 NC_009050.1 13784 14749 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rsp:RSP_3360 adenine specific DNA methyltransferase, D12 class; D12 class N6 adenine-specific DNA methyltransferase 13784..14749 Rhodobacter sphaeroides ATCC 17029 4899153 YP_001044877.1 CDS Rsph17029_3005 NC_009050.1 15035 16090 D PFAM: protein of unknown function DUF450; KEGG: rsp:RSP_3361 putative restriction endonuclease or methylase; hypothetical protein 15035..16090 Rhodobacter sphaeroides ATCC 17029 4898496 YP_001044878.1 CDS Rsph17029_3006 NC_009050.1 16135 16467 D hypothetical protein 16135..16467 Rhodobacter sphaeroides ATCC 17029 4898497 YP_001044879.1 CDS Rsph17029_3007 NC_009050.1 16464 17030 D hypothetical protein 16464..17030 Rhodobacter sphaeroides ATCC 17029 4898498 YP_001044880.1 CDS Rsph17029_3008 NC_009050.1 17433 17936 D KEGG: rsp:RSP_3363 hypothetical protein; hypothetical protein 17433..17936 Rhodobacter sphaeroides ATCC 17029 4898499 YP_001044881.1 CDS Rsph17029_3009 NC_009050.1 17964 18785 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 17964..18785 Rhodobacter sphaeroides ATCC 17029 4898500 YP_001044882.1 CDS Rsph17029_3010 NC_009050.1 18782 19114 D TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: rsp:RSP_3365 protein secretion chaperonine; export-related chaperone CsaA 18782..19114 Rhodobacter sphaeroides ATCC 17029 4898209 YP_001044883.1 CDS Rsph17029_3011 NC_009050.1 19111 20058 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3366 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 19111..20058 Rhodobacter sphaeroides ATCC 17029 4898210 YP_001044884.1 CDS Rsph17029_3012 NC_009050.1 20267 20932 D KEGG: rsp:RSP_3367 hypothetical protein; hypothetical protein 20267..20932 Rhodobacter sphaeroides ATCC 17029 4898330 YP_001044885.1 CDS Rsph17029_3013 NC_009050.1 21233 22552 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rsp:RSP_3368 periplasmic sensor diguanylate cyclase; diguanylate cyclase complement(21233..22552) Rhodobacter sphaeroides ATCC 17029 4898891 YP_001044886.1 CDS Rsph17029_3014 NC_009050.1 22684 22839 R KEGG: rsp:RSP_6179 hypothetical protein; hypothetical protein complement(22684..22839) Rhodobacter sphaeroides ATCC 17029 4898332 YP_001044887.1 CDS Rsph17029_3015 NC_009050.1 22836 24194 R PFAM: Amidase; KEGG: rsp:RSP_3369 Asp-tRNA Asn/Glu-tRNA Gln amidotransferase subunit A; amidase complement(22836..24194) Rhodobacter sphaeroides ATCC 17029 4898790 YP_001044888.1 CDS Rsph17029_3016 NC_009050.1 24181 25602 R PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3370 TRAP-T family transporter, DctM (12 TMs) subunit; TRAP C4-dicarboxylate transport system permease DctM subunit complement(24181..25602) Rhodobacter sphaeroides ATCC 17029 4898791 YP_001044889.1 CDS Rsph17029_3017 NC_009050.1 25784 26356 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3371 TRAP-T family transporter, small (4 TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ complement(25784..26356) Rhodobacter sphaeroides ATCC 17029 4898792 YP_001044890.1 CDS Rsph17029_3018 NC_009050.1 26408 27547 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3372 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit complement(26408..27547) Rhodobacter sphaeroides ATCC 17029 4898651 YP_001044891.1 CDS Rsph17029_3019 NC_009050.1 27725 28930 R PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_3373 ABC efflux transporter, inner membrane subunit; hypothetical protein complement(27725..28930) Rhodobacter sphaeroides ATCC 17029 4898652 YP_001044892.1 CDS Rsph17029_3020 NC_009050.1 28932 29633 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3374 ABC efflux transporter, ATPase subunit; ABC transporter complement(28932..29633) Rhodobacter sphaeroides ATCC 17029 4898653 YP_001044893.1 CDS Rsph17029_3021 NC_009050.1 29630 30886 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3375 membrane fusion protein, HlyD family; RND family efflux transporter MFP subunit complement(29630..30886) Rhodobacter sphaeroides ATCC 17029 4898553 YP_001044894.1 CDS Rsph17029_3022 NC_009050.1 30974 31417 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(30974..31417) Rhodobacter sphaeroides ATCC 17029 4898554 YP_001044895.1 CDS Rsph17029_3023 NC_009050.1 31597 32481 D KEGG: rsp:RSP_3377 glutathione S-transferase family protein; glutathione S-transferase family protein 31597..32481 Rhodobacter sphaeroides ATCC 17029 4898555 YP_001044896.1 CDS Rsph17029_3024 NC_009050.1 32545 33156 D KEGG: rsp:RSP_3378 hypothetical protein; hypothetical protein 32545..33156 Rhodobacter sphaeroides ATCC 17029 4898445 YP_001044897.1 CDS Rsph17029_3025 NC_009050.1 33156 33806 D KEGG: rsp:RSP_3379 hypothetical protein; hypothetical protein 33156..33806 Rhodobacter sphaeroides ATCC 17029 4898446 YP_001044898.1 CDS Rsph17029_3026 NC_009050.1 34042 34707 D PFAM: protein of unknown function DUF1236; SH3, type 3 domain protein; KEGG: rsp:RSP_3380 hypothetical protein; hypothetical protein 34042..34707 Rhodobacter sphaeroides ATCC 17029 4898447 YP_001044899.1 CDS Rsph17029_3027 NC_009050.1 34788 35762 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_3381 NAD(P)H -dependent quinone oxidoreductase; alcohol dehydrogenase complement(34788..35762) Rhodobacter sphaeroides ATCC 17029 4898968 YP_001044900.1 CDS Rsph17029_3028 NC_009050.1 35759 36115 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_3382 hypothetical protein; alkylhydroperoxidase complement(35759..36115) Rhodobacter sphaeroides ATCC 17029 4898181 YP_001044901.1 CDS Rsph17029_3029 NC_009050.1 36202 37020 R PFAM: cyclase family protein; KEGG: rsp:RSP_3383 hypothetical protein; cyclase family protein complement(36202..37020) Rhodobacter sphaeroides ATCC 17029 4898182 YP_001044902.1 CDS Rsph17029_3030 NC_009050.1 37191 38354 R PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rsp:RSP_3384 mandelate racemase/muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein complement(37191..38354) Rhodobacter sphaeroides ATCC 17029 4898183 YP_001044903.1 CDS Rsph17029_3031 NC_009050.1 38432 39379 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3385 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(38432..39379) Rhodobacter sphaeroides ATCC 17029 4898612 YP_001044904.1 CDS Rsph17029_3032 NC_009050.1 39640 40596 D PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_3386 TRAP-T family transporter, periplasmic binding protein; hypothetical protein 39640..40596 Rhodobacter sphaeroides ATCC 17029 4898613 YP_001044905.1 CDS Rsph17029_3033 NC_009050.1 40606 42582 D PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_3387 TRAP-T family transporter, fused small and large inner membrane subunits; hypothetical protein 40606..42582 Rhodobacter sphaeroides ATCC 17029 4898614 YP_001044906.1 CDS Rsph17029_3034 NC_009050.1 42597 43679 D KEGG: rsp:RSP_3388 putative isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase TtuC; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 42597..43679 Rhodobacter sphaeroides ATCC 17029 4898112 YP_001044907.1 CDS Rsph17029_3035 NC_009050.1 43690 44763 D KEGG: rsp:RSP_3389 isocitrate/isopropylmalate dehydrogenase / tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 43690..44763 Rhodobacter sphaeroides ATCC 17029 4898113 YP_001044908.1 CDS Rsph17029_3036 NC_009050.1 44936 45718 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3390 ABC Fe3+-siderophores transporter, ATPase subunit; ABC transporter complement(44936..45718) Rhodobacter sphaeroides ATCC 17029 4898114 YP_001044909.1 CDS Rsph17029_3037 NC_009050.1 45715 46749 R PFAM: transport system permease protein; KEGG: rsp:RSP_3391 ABC Fe3+-siderophores transporter, inner membrane subunit; transport system permease protein complement(45715..46749) Rhodobacter sphaeroides ATCC 17029 4899135 YP_001044910.1 CDS Rsph17029_3038 NC_009050.1 46746 47750 R PFAM: periplasmic binding protein; KEGG: rsp:RSP_3392 ABC Fe3+-siderophores transporter, periplasmic binding protein; periplasmic binding protein complement(46746..47750) Rhodobacter sphaeroides ATCC 17029 4899136 YP_001044911.1 CDS Rsph17029_3039 NC_009050.1 48221 49015 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(48221..49015) Rhodobacter sphaeroides ATCC 17029 4899137 YP_001044912.1 CDS Rsph17029_3040 NC_009050.1 49026 49898 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(49026..49898) Rhodobacter sphaeroides ATCC 17029 4898594 YP_001044913.1 CDS Rsph17029_3041 NC_009050.1 49895 51013 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3396 ABC opine/polyamine transporter, ATPase subunit; ABC transporter complement(49895..51013) Rhodobacter sphaeroides ATCC 17029 4898595 YP_001044914.1 CDS Rsph17029_3042 NC_009050.1 51015 52058 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3397 ABC opine/polyamine transporter, periplasmic binding protein; extracellular solute-binding protein complement(51015..52058) Rhodobacter sphaeroides ATCC 17029 4898596 YP_001044915.1 CDS Rsph17029_3043 NC_009050.1 52132 52785 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3398 hypothetical protein; dimethylmenaquinone methyltransferase complement(52132..52785) Rhodobacter sphaeroides ATCC 17029 4899022 YP_001044916.1 CDS Rsph17029_3044 NC_009050.1 52795 53598 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3399 carbon-nitrogen hydrolase family protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(52795..53598) Rhodobacter sphaeroides ATCC 17029 4899023 YP_001044917.1 CDS Rsph17029_3045 NC_009050.1 53688 54578 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3400 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(53688..54578) Rhodobacter sphaeroides ATCC 17029 4899159 YP_001044918.1 CDS Rsph17029_3046 NC_009050.1 54802 56490 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rsp:RSP_6180 hypothetical protein; diguanylate cyclase 54802..56490 Rhodobacter sphaeroides ATCC 17029 4899160 YP_001044919.1 CDS Rsph17029_3047 NC_009050.1 56506 59142 D KEGG: rsp:RSP_3402 multisensor diguanylate cyclase/phosphodiesterase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 56506..59142 Rhodobacter sphaeroides ATCC 17029 4899161 YP_001044920.1 CDS Rsph17029_3048 NC_009050.1 59149 59991 R PFAM: protein of unknown function DUF218; KEGG: rsp:RSP_3403 hypothetical protein; hypothetical protein complement(59149..59991) Rhodobacter sphaeroides ATCC 17029 4898671 YP_001044921.1 CDS Rsph17029_3049 NC_009050.1 60243 61340 D KEGG: rsp:RSP_3404 hypothetical protein; hypothetical protein 60243..61340 Rhodobacter sphaeroides ATCC 17029 4898672 YP_001044922.1 CDS Rsph17029_3050 NC_009050.1 61373 62092 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3405 transcriptional regulator, GntR family; GntR family transcriptional regulator 61373..62092 Rhodobacter sphaeroides ATCC 17029 4898673 YP_001044923.1 CDS Rsph17029_3051 NC_009050.1 62137 63123 R KEGG: rsp:RSP_3406 4-hydroxythreonine-4-phosphate dehydrogenase 2; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(62137..63123) Rhodobacter sphaeroides ATCC 17029 4898457 YP_001044924.1 CDS Rsph17029_3052 NC_009050.1 63149 64099 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3407 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding subunit; D-isomer specific 2-hydroxyacid dehydrogenase complement(63149..64099) Rhodobacter sphaeroides ATCC 17029 4898458 YP_001044925.1 CDS Rsph17029_3053 NC_009050.1 64096 64980 R PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3408 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase complement(64096..64980) Rhodobacter sphaeroides ATCC 17029 4898459 YP_001044926.1 CDS Rsph17029_3054 NC_009050.1 64984 66480 R PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_3409 TRAP-T family transporter, large (12 TMs) inner membrane subunit; hypothetical protein complement(64984..66480) Rhodobacter sphaeroides ATCC 17029 4898526 YP_001044927.1 CDS Rsph17029_3055 NC_009050.1 66541 67494 R PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_3410 TRAP-T family transporter, periplasmic binding protein; hypothetical protein complement(66541..67494) Rhodobacter sphaeroides ATCC 17029 4898527 YP_001044928.1 CDS Rsph17029_3056 NC_009050.1 67530 67994 R KEGG: rsp:RSP_3411 TRAP-T family transporter, small (4 TMs) inner membrane subunit; TRAP-T family transporter small inner membrane subunit complement(67530..67994) Rhodobacter sphaeroides ATCC 17029 4898528 YP_001044929.1 CDS Rsph17029_3057 NC_009050.1 68255 69376 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rsp:RSP_3412 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 68255..69376 Rhodobacter sphaeroides ATCC 17029 4899069 YP_001044930.1 CDS Rsph17029_3058 NC_009050.1 69424 70224 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit; ABC transporter complement(69424..70224) Rhodobacter sphaeroides ATCC 17029 4899070 YP_001044931.1 CDS Rsph17029_3059 NC_009050.1 70221 71261 R PFAM: transport system permease protein; KEGG: rsp:RSP_3414 ABC Fe+3-siderophore transporter, inner membrane subunit; transport system permease protein complement(70221..71261) Rhodobacter sphaeroides ATCC 17029 4899071 YP_001044932.1 CDS Rsph17029_3060 NC_009050.1 71258 72436 R PFAM: transport system permease protein; KEGG: rsp:RSP_3415 ABC Fe+3-siderophore transporter, inner membrane subunit; transport system permease complement(71258..72436) Rhodobacter sphaeroides ATCC 17029 4898965 YP_001044933.1 CDS Rsph17029_3061 NC_009050.1 72433 73410 R PFAM: periplasmic binding protein; KEGG: rsp:RSP_3416 ABC Fe+3-siderophore transporter, periplasmic binding protein; periplasmic binding protein complement(72433..73410) Rhodobacter sphaeroides ATCC 17029 4898966 YP_001044934.1 CDS Rsph17029_3062 NC_009050.1 73737 75884 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_3417 TonB dependent outer membrane ferrichrome-iron receptor; TonB-dependent siderophore receptor 73737..75884 Rhodobacter sphaeroides ATCC 17029 4898967 YP_001044935.1 CDS Rsph17029_3063 NC_009050.1 75998 76918 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: pde:Pden_3520 helix-turn-helix-domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(75998..76918) Rhodobacter sphaeroides ATCC 17029 4898991 YP_001044936.1 CDS Rsph17029_3064 NC_009050.1 77717 78295 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rsp:RSP_3419 hypothetical protein; peroxidase-like protein 77717..78295 Rhodobacter sphaeroides ATCC 17029 4898992 YP_001044937.1 CDS Rsph17029_3065 NC_009050.1 78516 80090 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3420 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 78516..80090 Rhodobacter sphaeroides ATCC 17029 4898993 YP_001044938.1 CDS Rsph17029_3066 NC_009050.1 80087 80662 D KEGG: rsp:RSP_3421 hypothetical protein; hypothetical protein 80087..80662 Rhodobacter sphaeroides ATCC 17029 4899089 YP_001044939.1 CDS Rsph17029_3067 NC_009050.1 80674 81252 D KEGG: rsp:RSP_3422 hypothetical protein; hypothetical protein 80674..81252 Rhodobacter sphaeroides ATCC 17029 4899090 YP_001044940.1 CDS Rsph17029_3068 NC_009050.1 81431 82198 R TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rsp:RSP_3423 probable exodeoxyribonuclease III; exodeoxyribonuclease III Xth complement(81431..82198) Rhodobacter sphaeroides ATCC 17029 4899091 YP_001044941.1 CDS Rsph17029_3069 NC_009050.1 82380 83033 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3424 hypothetical protein; short-chain dehydrogenase/reductase SDR 82380..83033 Rhodobacter sphaeroides ATCC 17029 4898475 YP_001044942.1 CDS Rsph17029_3070 NC_009050.1 83146 83724 R KEGG: rsp:RSP_3425 hypothetical protein; hypothetical protein complement(83146..83724) Rhodobacter sphaeroides ATCC 17029 4898476 YP_001044943.1 CDS Rsph17029_3071 NC_009050.1 83721 84923 R PFAM: glutathionylspermidine synthase; KEGG: rsp:RSP_3426 hypothetical protein; glutathionylspermidine synthase complement(83721..84923) Rhodobacter sphaeroides ATCC 17029 4898477 YP_001044944.1 CDS Rsph17029_3072 NC_009050.1 85376 87100 D PFAM: Animal haem peroxidase; KEGG: rsp:RSP_3427 hypothetical protein; heme peroxidase 85376..87100 Rhodobacter sphaeroides ATCC 17029 4898949 YP_001044945.1 CDS Rsph17029_3073 NC_009050.1 87151 89109 D KEGG: rsp:RSP_3428 hypothetical protein; hypothetical protein 87151..89109 Rhodobacter sphaeroides ATCC 17029 4898950 YP_001044946.1 CDS Rsph17029_3074 NC_009050.1 89081 90919 D PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rsp:RSP_3429 hypothetical protein; peptidase C14, caspase catalytic subunit p20 89081..90919 Rhodobacter sphaeroides ATCC 17029 4898589 YP_001044947.1 CDS Rsph17029_3075 NC_009050.1 91007 91669 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3430 transcriptional regulator, winged helix family; two component transcriptional regulator 91007..91669 Rhodobacter sphaeroides ATCC 17029 4898590 YP_001044948.1 CDS Rsph17029_3076 NC_009050.1 91666 93018 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3431 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 91666..93018 Rhodobacter sphaeroides ATCC 17029 4898591 YP_001044949.1 CDS Rsph17029_3077 NC_009050.1 93196 94755 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3432 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 93196..94755 Rhodobacter sphaeroides ATCC 17029 4898759 YP_001044950.1 CDS Rsph17029_3078 NC_009050.1 94820 95293 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: rsp:RSP_3433 transcriptionalregulator, CopG family; CopG family transcriptional regulator 94820..95293 Rhodobacter sphaeroides ATCC 17029 4898760 YP_001044951.1 CDS Rsph17029_3079 NC_009050.1 95584 95952 R KEGG: rsp:RSP_3434 hypothetical protein; hypothetical protein complement(95584..95952) Rhodobacter sphaeroides ATCC 17029 4898761 YP_001044952.1 CDS Rsph17029_3080 NC_009050.1 96053 96385 D KEGG: rsp:RSP_3435 possible DNA-binding protein; putative DNA-binding protein 96053..96385 Rhodobacter sphaeroides ATCC 17029 4898175 YP_001044953.1 CDS Rsph17029_3081 NC_009050.1 96472 97353 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3436 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(96472..97353) Rhodobacter sphaeroides ATCC 17029 4898176 YP_001044954.1 CDS Rsph17029_3082 NC_009050.1 97473 98693 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 97473..98693 Rhodobacter sphaeroides ATCC 17029 4898177 YP_001044955.1 CDS Rsph17029_3083 NC_009050.1 98690 99115 D PFAM: Endoribonuclease L-PSP; KEGG: rsp:RSP_3438 translation initiation inhibitor; endoribonuclease L-PSP 98690..99115 Rhodobacter sphaeroides ATCC 17029 4898166 YP_001044956.1 CDS Rsph17029_3084 NC_009050.1 99164 100372 D PFAM: aminotransferase, class I and II; KEGG: rsp:RSP_3439 aspartate aminotransferase; class I and II aminotransferase 99164..100372 Rhodobacter sphaeroides ATCC 17029 4898167 YP_001044957.1 CDS Rsph17029_3085 NC_009050.1 100438 101223 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3440 putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 100438..101223 Rhodobacter sphaeroides ATCC 17029 4898168 YP_001044958.1 CDS Rsph17029_3086 NC_009050.1 101239 101961 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3441 hypothetical protein; hypothetical protein 101239..101961 Rhodobacter sphaeroides ATCC 17029 4898744 YP_001044959.1 CDS Rsph17029_3087 NC_009050.1 102056 102997 D PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3442 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 102056..102997 Rhodobacter sphaeroides ATCC 17029 4898745 YP_001044960.1 CDS Rsph17029_3088 NC_009050.1 103225 104190 R PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3443 putative acetamidase/formamidase; acetamidase/formamidase complement(103225..104190) Rhodobacter sphaeroides ATCC 17029 4898746 YP_001044961.1 CDS Rsph17029_3089 NC_009050.1 104202 105386 R PFAM: creatinase; peptidase M24; KEGG: rsp:RSP_3444 putative Xaa-Pro aminopeptidase; creatinase complement(104202..105386) Rhodobacter sphaeroides ATCC 17029 4898190 YP_001044962.1 CDS Rsph17029_3090 NC_009050.1 105391 106026 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3445 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(105391..106026) Rhodobacter sphaeroides ATCC 17029 4898191 YP_001044963.1 CDS Rsph17029_3091 NC_009050.1 106023 107303 R allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase complement(106023..107303) Rhodobacter sphaeroides ATCC 17029 4898192 YP_001044964.1 CDS Rsph17029_3092 NC_009050.1 107300 108295 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rsp:RSP_3447 putative dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase complement(107300..108295) Rhodobacter sphaeroides ATCC 17029 4898390 YP_001044965.1 CDS Rsph17029_3093 NC_009050.1 108292 108954 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3448 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(108292..108954) Rhodobacter sphaeroides ATCC 17029 4898391 YP_001044966.1 CDS Rsph17029_3094 NC_009050.1 108951 110015 R TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rsp:RSP_3449 putative allophanate hydrolase subunit 2; urea amidolyase-like protein complement(108951..110015) Rhodobacter sphaeroides ATCC 17029 4899083 YP_001044967.1 CDS Rsph17029_3095 NC_009050.1 110012 110746 R PFAM: Allophanate hydrolase subunit 1; KEGG: rsp:RSP_3450 hypothetical protein; allophanate hydrolase subunit 1 complement(110012..110746) Rhodobacter sphaeroides ATCC 17029 4899084 YP_001044968.1 CDS Rsph17029_3096 NC_009050.1 110806 112107 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3451 TRAP-T family transporter, large (12TMs) inner membrane subunit; TRAP dicarboxylate transporter subunit DctM complement(110806..112107) Rhodobacter sphaeroides ATCC 17029 4899085 YP_001044969.1 CDS Rsph17029_3097 NC_009050.1 112117 112737 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3452 TRAP-T family transporter, small (4TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ complement(112117..112737) Rhodobacter sphaeroides ATCC 17029 4898674 YP_001044970.1 CDS Rsph17029_3098 NC_009050.1 112748 113731 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3453 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter- DctP subunit complement(112748..113731) Rhodobacter sphaeroides ATCC 17029 4898675 YP_001044971.1 CDS Rsph17029_3099 NC_009050.1 113906 114676 D PFAM: LamB/YcsF family protein; KEGG: rsp:RSP_3454 hypothetical protein; LamB/YcsF family protein 113906..114676 Rhodobacter sphaeroides ATCC 17029 4898676 YP_001044972.1 CDS Rsph17029_3100 NC_009050.1 114688 115545 D PFAM: aminotransferase, class IV; KEGG: rsp:RSP_3455 D-alanine aminotransferase; aminotransferase, class IV 114688..115545 Rhodobacter sphaeroides ATCC 17029 4899096 YP_001044973.1 CDS Rsph17029_3101 NC_009050.1 115557 116483 D PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3456 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 115557..116483 Rhodobacter sphaeroides ATCC 17029 4899097 YP_001044974.1 CDS Rsph17029_3102 NC_009050.1 116990 117853 D PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_3457 ABC polar amino acid transporter, periplasmic binding protein; extracellular solute-binding protein 116990..117853 Rhodobacter sphaeroides ATCC 17029 4899098 YP_001044975.1 CDS Rsph17029_3103 NC_009050.1 117923 118663 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3458 ABC polar amino acid transporter, ATPase subunit; ABC transporter 117923..118663 Rhodobacter sphaeroides ATCC 17029 4898196 YP_001044976.1 CDS Rsph17029_3104 NC_009050.1 118668 119348 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3459 ABC polar amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 118668..119348 Rhodobacter sphaeroides ATCC 17029 4898197 YP_001044977.1 CDS Rsph17029_3105 NC_009050.1 119352 120017 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3460 ABC polar amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 119352..120017 Rhodobacter sphaeroides ATCC 17029 4898198 YP_001044978.1 CDS Rsph17029_3106 NC_009050.1 120056 120982 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3461 N-carbamyl-D-amino acid amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 120056..120982 Rhodobacter sphaeroides ATCC 17029 4898140 YP_001044979.1 CDS Rsph17029_3107 NC_009050.1 120995 122452 D catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; dihydropyrimidinase 120995..122452 Rhodobacter sphaeroides ATCC 17029 4898141 YP_001044980.1 CDS Rsph17029_3108 NC_009050.1 122449 123090 D PFAM: Asp/Glu racemase; KEGG: rsp:RSP_3463 putative hydantoin racemase; Asp/Glu racemase 122449..123090 Rhodobacter sphaeroides ATCC 17029 4898142 YP_001044981.1 CDS Rsph17029_3109 NC_009050.1 123087 124016 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3464 transcriptional regulator, LysR-family; LysR family transcriptional regulator 123087..124016 Rhodobacter sphaeroides ATCC 17029 4898532 YP_001044982.1 CDS Rsph17029_3110 NC_009050.1 124013 124621 D KEGG: rsp:RSP_3465 hypothetical protein; hypothetical protein 124013..124621 Rhodobacter sphaeroides ATCC 17029 4898533 YP_001044983.1 CDS Rsph17029_3111 NC_009050.1 124979 126268 D KEGG: rsp:RSP_3466 hypothetical protein; hypothetical protein 124979..126268 Rhodobacter sphaeroides ATCC 17029 4898534 YP_001044984.1 CDS Rsph17029_3112 NC_009050.1 126270 127292 D KEGG: rsp:RSP_3467 hypothetical protein; hypothetical protein 126270..127292 Rhodobacter sphaeroides ATCC 17029 4898368 YP_001044985.1 CDS Rsph17029_3113 NC_009050.1 127285 128376 D catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase 127285..128376 Rhodobacter sphaeroides ATCC 17029 4898369 YP_001044986.1 CDS Rsph17029_3114 NC_009050.1 128373 129374 D KEGG: rsp:RSP_3469 hypothetical protein; hypothetical protein 128373..129374 Rhodobacter sphaeroides ATCC 17029 4898384 YP_001044987.1 CDS Rsph17029_3115 NC_009050.1 129371 130150 D KEGG: rsp:RSP_3470 hypothetical protein; hypothetical protein 129371..130150 Rhodobacter sphaeroides ATCC 17029 4898385 YP_001044988.1 CDS Rsph17029_3116 NC_009050.1 130173 130859 D KEGG: rsp:RSP_3471 hypothetical protein; hypothetical protein 130173..130859 Rhodobacter sphaeroides ATCC 17029 4898386 YP_001044989.1 CDS Rsph17029_3117 NC_009050.1 130856 131254 R KEGG: rsp:RSP_3472 hypothetical protein; hypothetical protein complement(130856..131254) Rhodobacter sphaeroides ATCC 17029 4898918 YP_001044990.1 CDS Rsph17029_3118 NC_009050.1 131247 133916 R PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3474 hypothetical protein; ATPase complement(131247..133916) Rhodobacter sphaeroides ATCC 17029 4898919 YP_001044991.1 CDS Rsph17029_3119 NC_009050.1 134030 136036 D PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3475 serine/threonine protein kinase; protein kinase 134030..136036 Rhodobacter sphaeroides ATCC 17029 4898920 YP_001044992.1 CDS Rsph17029_3120 NC_009050.1 136135 137208 D PFAM: ImpA domain protein; KEGG: rsp:RSP_3476 hypothetical protein; ImpA domain-containing protein 136135..137208 Rhodobacter sphaeroides ATCC 17029 4898359 YP_001044993.1 CDS Rsph17029_3121 NC_009050.1 137227 137757 D PFAM: Uncharacterised conserved protein UCP028301; KEGG: rsp:RSP_3477 hypothetical protein; hypothetical protein 137227..137757 Rhodobacter sphaeroides ATCC 17029 4898360 YP_001044994.1 CDS Rsph17029_3122 NC_009050.1 137760 139271 D PFAM: protein of unknown function DUF877; KEGG: rsp:RSP_3478 hypothetical protein; hypothetical protein 137760..139271 Rhodobacter sphaeroides ATCC 17029 4898361 YP_001044995.1 CDS Rsph17029_3123 NC_009050.1 139323 139814 D PFAM: protein of unknown function DUF796; KEGG: rsp:RSP_3479 hypothetical protein; hypothetical protein 139323..139814 Rhodobacter sphaeroides ATCC 17029 4898716 YP_001044996.1 CDS Rsph17029_3124 NC_009050.1 139847 140554 D PFAM: GPW/gp25 family protein; KEGG: rsp:RSP_3480 hypothetical protein; GPW/gp25 family protein 139847..140554 Rhodobacter sphaeroides ATCC 17029 4898717 YP_001044997.1 CDS Rsph17029_3125 NC_009050.1 140554 142419 D PFAM: protein of unknown function DUF879; KEGG: rsp:RSP_3481 hypothetical protein; hypothetical protein 140554..142419 Rhodobacter sphaeroides ATCC 17029 4898718 YP_001044998.1 CDS Rsph17029_3126 NC_009050.1 142383 143381 D PFAM: protein of unknown function DUF1305; KEGG: rsp:RSP_3482 hypothetical protein; hypothetical protein 142383..143381 Rhodobacter sphaeroides ATCC 17029 4898701 YP_001044999.1 CDS Rsph17029_3127 NC_009050.1 143375 144604 D PFAM: Forkhead-associated protein; KEGG: rsp:RSP_3483 FHA domain-containing protein; FHA domain-containing protein 143375..144604 Rhodobacter sphaeroides ATCC 17029 4898702 YP_001045000.1 CDS Rsph17029_3128 NC_009050.1 144597 145049 D KEGG: rsp:RSP_3484 hypothetical protein; hypothetical protein 144597..145049 Rhodobacter sphaeroides ATCC 17029 4898703 YP_001045001.1 CDS Rsph17029_3129 NC_009050.1 145058 146386 D PFAM: protein of unknown function DUF876; KEGG: rsp:RSP_3485 hypothetical protein; hypothetical protein 145058..146386 Rhodobacter sphaeroides ATCC 17029 4899187 YP_001045002.1 CDS Rsph17029_3130 NC_009050.1 146451 147812 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_3486 possible outer membrane protein, OmpA family; OmpA/MotB domain-containing protein 146451..147812 Rhodobacter sphaeroides ATCC 17029 4899188 YP_001045003.1 CDS Rsph17029_3131 NC_009050.1 147812 151333 D PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: rsp:RSP_3487 hypothetical protein; ImcF domain-containing protein 147812..151333 Rhodobacter sphaeroides ATCC 17029 4899189 YP_001045004.1 CDS Rsph17029_3132 NC_009050.1 151323 151814 D KEGG: rsp:RSP_3488 hypothetical protein; hypothetical protein 151323..151814 Rhodobacter sphaeroides ATCC 17029 4898273 YP_001045005.1 CDS Rsph17029_3133 NC_009050.1 151824 154127 R PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: rsp:RSP_3489 hypothetical protein; Rhs element Vgr protein complement(151824..154127) Rhodobacter sphaeroides ATCC 17029 4898274 YP_001045006.1 CDS Rsph17029_3134 NC_009050.1 154144 156552 R PFAM: protein of unknown function DUF1215; KEGG: rsp:RSP_3490 hypothetical protein; hypothetical protein complement(154144..156552) Rhodobacter sphaeroides ATCC 17029 4898145 YP_001045007.1 CDS Rsph17029_3135 NC_009050.1 156552 157400 R KEGG: rsp:RSP_3491 hypothetical protein; hypothetical protein complement(156552..157400) Rhodobacter sphaeroides ATCC 17029 4898146 YP_001045008.1 CDS Rsph17029_3136 NC_009050.1 157404 158159 R PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: rsp:RSP_3492 protein phosphatase 2C-like; protein phosphatase 2C domain-containing protein complement(157404..158159) Rhodobacter sphaeroides ATCC 17029 4898147 YP_001045009.1 CDS Rsph17029_3137 NC_009050.1 158302 159066 D PFAM: OmpA/MotB domain protein; KEGG: rsp:RSP_3494 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 158302..159066 Rhodobacter sphaeroides ATCC 17029 4898710 YP_001045010.1 CDS Rsph17029_3138 NC_009050.1 159063 159989 R KEGG: rsp:RSP_3493 hypothetical protein; hypothetical protein complement(159063..159989) Rhodobacter sphaeroides ATCC 17029 4898711 YP_001045011.1 CDS Rsph17029_3139 NC_009050.1 159986 160396 R KEGG: rsp:RSP_3495 hypothetical protein; hypothetical protein complement(159986..160396) Rhodobacter sphaeroides ATCC 17029 4898712 YP_001045012.1 CDS Rsph17029_3140 NC_009050.1 160396 161469 R KEGG: rsp:RSP_3496 zinc carboxypeptidase A metalloprotease (M14); zinc carboxypeptidase A metalloprotease (M14) complement(160396..161469) Rhodobacter sphaeroides ATCC 17029 4899055 YP_001045013.1 CDS Rsph17029_3141 NC_009050.1 161704 162018 D hypothetical protein 161704..162018 Rhodobacter sphaeroides ATCC 17029 4899056 YP_001045014.1 CDS Rsph17029_3142 NC_009050.1 162028 164943 D PFAM: Sel1 domain protein repeat-containing protein; peptidase C14, caspase catalytic subunit p20; KEGG: rsp:RSP_3497 caspase-1, P20; peptidase C14, caspase catalytic subunit p20 162028..164943 Rhodobacter sphaeroides ATCC 17029 4899057 YP_001045015.1 CDS Rsph17029_3143 NC_009050.1 164940 165398 D KEGG: rsp:RSP_6182 hypothetical protein; hypothetical protein 164940..165398 Rhodobacter sphaeroides ATCC 17029 4899086 YP_001045016.1 CDS Rsph17029_3144 NC_009050.1 165400 167568 D KEGG: rsp:RSP_3498 antifreeze protein, type I; antifreeze protein, type I 165400..167568 Rhodobacter sphaeroides ATCC 17029 4899087 YP_001045017.1 CDS Rsph17029_3145 NC_009050.1 167590 168831 R KEGG: rsp:RSP_3499 short chain dehydrogenase; short chain dehydrogenase complement(167590..168831) Rhodobacter sphaeroides ATCC 17029 4899088 YP_001045018.1 CDS Rsph17029_3146 NC_009050.1 168895 169911 R KEGG: rsp:RSP_3500 ABC sugar transporter, periplasmic binding protein; ABC sugar transporter, periplasmic binding protein complement(168895..169911) Rhodobacter sphaeroides ATCC 17029 4898609 YP_001045019.1 CDS Rsph17029_3147 NC_009050.1 169946 170929 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_3501 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(169946..170929) Rhodobacter sphaeroides ATCC 17029 4898610 YP_001045020.1 CDS Rsph17029_3148 NC_009050.1 170926 171936 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_3502 ABC sugar transporter, inner membrane subunit; inner-membrane translocator complement(170926..171936) Rhodobacter sphaeroides ATCC 17029 4898611 YP_001045021.1 CDS Rsph17029_3149 NC_009050.1 171929 173404 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3503 ABC sugar transporter, fused ATPase domains; ABC transporter complement(171929..173404) Rhodobacter sphaeroides ATCC 17029 4898103 YP_001045022.1 CDS Rsph17029_3150 NC_009050.1 173620 174558 D PFAM: putative sugar-binding domain protein; KEGG: rsp:RSP_3505 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 173620..174558 Rhodobacter sphaeroides ATCC 17029 4898104 YP_001045023.1 CDS Rsph17029_3151 NC_009050.1 174562 176091 D PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_3506 probable sugar kinase, EGGY family protein; autoinducer-2 (AI-2) kinase 174562..176091 Rhodobacter sphaeroides ATCC 17029 4898105 YP_001045024.1 CDS Rsph17029_3152 NC_009050.1 176121 176429 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rsp:RSP_3507 hypothetical protein; antibiotic biosynthesis monooxygenase 176121..176429 Rhodobacter sphaeroides ATCC 17029 4898905 YP_001045025.1 CDS Rsph17029_3153 NC_009050.1 176855 178177 D PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3508 predicted acetamidase/formamidase; acetamidase/formamidase 176855..178177 Rhodobacter sphaeroides ATCC 17029 4898906 YP_001045026.1 CDS Rsph17029_3154 NC_009050.1 178385 178993 R PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_3509 hemolysin-type calcium-binding region, RTX; hemolysin-type calcium-binding region complement(178385..178993) Rhodobacter sphaeroides ATCC 17029 4898620 YP_001045027.1 CDS Rsph17029_3155 NC_009050.1 179127 179480 D KEGG: rsp:RSP_3510 hypothetical protein; hypothetical protein 179127..179480 Rhodobacter sphaeroides ATCC 17029 4898621 YP_001045028.1 CDS Rsph17029_3156 NC_009050.1 179480 180142 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3511 two component transcriptional regulator, winged helix family family; two component transcriptional regulator 179480..180142 Rhodobacter sphaeroides ATCC 17029 4898622 YP_001045029.1 CDS Rsph17029_3157 NC_009050.1 180139 181482 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3512 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 180139..181482 Rhodobacter sphaeroides ATCC 17029 4898719 YP_001045030.1 CDS Rsph17029_3158 NC_009050.1 182060 183037 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rsp:RSP_3513 GAF sensor diguanylate cyclase; diguanylate cyclase 182060..183037 Rhodobacter sphaeroides ATCC 17029 4898720 YP_001045031.1 CDS Rsph17029_3159 NC_009050.1 183130 184134 R PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_3514 transcriptional regulator, AraC family; AraC family transcriptional regulator complement(183130..184134) Rhodobacter sphaeroides ATCC 17029 4898721 YP_001045032.1 CDS Rsph17029_3160 NC_009050.1 184269 185306 D PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3515 ABC polyamine/opine transporter, periplasmic binding protein; extracellular solute-binding protein 184269..185306 Rhodobacter sphaeroides ATCC 17029 4898924 YP_001045033.1 CDS Rsph17029_3161 NC_009050.1 185313 186302 D PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3516 ABC polyamine/opine transporter, ATPase subunit; ABC transporter 185313..186302 Rhodobacter sphaeroides ATCC 17029 4898925 YP_001045034.1 CDS Rsph17029_3162 NC_009050.1 186307 187155 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3517 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 186307..187155 Rhodobacter sphaeroides ATCC 17029 4898926 YP_001045035.1 CDS Rsph17029_3163 NC_009050.1 187157 187942 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3518 ABC polyamine/opine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component 187157..187942 Rhodobacter sphaeroides ATCC 17029 4898178 YP_001045036.1 CDS Rsph17029_3164 NC_009050.1 187985 188998 D PFAM: proline racemase; KEGG: rsp:RSP_3519 putative proline racemase; proline racemase 187985..188998 Rhodobacter sphaeroides ATCC 17029 4898179 YP_001045037.1 CDS Rsph17029_3165 NC_009050.1 189293 190915 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3520 ABC peptide transporter, fused ATPase domains; ABC transporter complement(189293..190915) Rhodobacter sphaeroides ATCC 17029 4898180 YP_001045038.1 CDS Rsph17029_3166 NC_009050.1 190919 191797 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3522 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(190919..191797) Rhodobacter sphaeroides ATCC 17029 4899165 YP_001045039.1 CDS Rsph17029_3167 NC_009050.1 191808 192773 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3523 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(191808..192773) Rhodobacter sphaeroides ATCC 17029 4899166 YP_001045040.1 CDS Rsph17029_3168 NC_009050.1 192839 194443 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3524 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein complement(192839..194443) Rhodobacter sphaeroides ATCC 17029 4899167 YP_001045041.1 CDS Rsph17029_3169 NC_009050.1 194533 196140 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3525 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein complement(194533..196140) Rhodobacter sphaeroides ATCC 17029 4898881 YP_001045042.1 CDS Rsph17029_3170 NC_009050.1 196302 197774 D PFAM: Amidase; KEGG: rsp:RSP_3526 amidase; amidase 196302..197774 Rhodobacter sphaeroides ATCC 17029 4898882 YP_001045043.1 CDS Rsph17029_3171 NC_009050.1 197782 198816 D PFAM: histone deacetylase superfamily; KEGG: rsp:RSP_3527 probable acetylpolyamine aminohydrolase; histone deacetylase superfamily protein 197782..198816 Rhodobacter sphaeroides ATCC 17029 4898883 YP_001045044.1 CDS Rsph17029_3172 NC_009050.1 198840 199490 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3528 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(198840..199490) Rhodobacter sphaeroides ATCC 17029 4898957 YP_001045045.1 CDS Rsph17029_3173 NC_009050.1 199566 200429 R PFAM: amidohydrolase 2; KEGG: rsp:RSP_3529 hypothetical protein; amidohydrolase 2 complement(199566..200429) Rhodobacter sphaeroides ATCC 17029 4898958 YP_001045046.1 CDS Rsph17029_3174 NC_009050.1 200434 202029 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3530 oxidoreductase; FAD dependent oxidoreductase complement(200434..202029) Rhodobacter sphaeroides ATCC 17029 4899156 YP_001045047.1 CDS Rsph17029_3175 NC_009050.1 202026 203690 R PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_3532 AMP-binding enzyme; AMP-dependent synthetase and ligase complement(202026..203690) Rhodobacter sphaeroides ATCC 17029 4899157 YP_001045048.1 CDS Rsph17029_3176 NC_009050.1 203759 205246 R PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3533 aldehyde dehydrogenase family protein; betaine-aldehyde dehydrogenase complement(203759..205246) Rhodobacter sphaeroides ATCC 17029 4899158 YP_001045049.1 CDS Rsph17029_3177 NC_009050.1 205284 206687 R PFAM: aminotransferase class-III; KEGG: rsp:RSP_3534 hypothetical protein; hypothetical protein complement(205284..206687) Rhodobacter sphaeroides ATCC 17029 4898762 YP_001045050.1 CDS Rsph17029_3178 NC_009050.1 206929 208896 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rsp:RSP_3535 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase bifunctional enzyme; 3-hydroxyacyl-CoA dehydrogenase 206929..208896 Rhodobacter sphaeroides ATCC 17029 4898763 YP_001045051.1 CDS Rsph17029_3179 NC_009050.1 208961 210160 D catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 208961..210160 Rhodobacter sphaeroides ATCC 17029 4898764 YP_001045052.1 CDS Rsph17029_3180 NC_009050.1 210364 211392 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rsp:RSP_3537 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 210364..211392 Rhodobacter sphaeroides ATCC 17029 4898962 YP_001045053.1 CDS Rsph17029_3181 NC_009050.1 211444 212196 R KEGG: rsp:RSP_3538 hypothetical protein; hypothetical protein complement(211444..212196) Rhodobacter sphaeroides ATCC 17029 4898963 YP_001045054.1 CDS Rsph17029_3182 NC_009050.1 212270 220306 R TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: rsp:RSP_3540 putative adhesin or RTX toxin; outer membrane adhesin-like protein complement(212270..220306) Rhodobacter sphaeroides ATCC 17029 4898964 YP_001045055.1 CDS Rsph17029_3183 NC_009050.1 220757 221824 D KEGG: rsp:RSP_3542 hypothetical protein; hypothetical protein 220757..221824 Rhodobacter sphaeroides ATCC 17029 4898172 YP_001045056.1 CDS Rsph17029_3185 NC_009050.1 222955 223107 R KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein complement(222955..223107) Rhodobacter sphaeroides ATCC 17029 4898987 YP_001045057.1 CDS Rsph17029_3186 NC_009050.1 223159 224205 D PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 223159..224205 Rhodobacter sphaeroides ATCC 17029 4898174 YP_001045058.1 CDS Rsph17029_3187 NC_009050.1 224189 224383 R KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA complement(224189..224383) Rhodobacter sphaeroides ATCC 17029 4898550 YP_001045059.1 CDS Rsph17029_3188 NC_009050.1 224763 225797 D KEGG: mgm:Mmc1_0568 putative ATP-binding protein; putative ATP-binding protein 224763..225797 Rhodobacter sphaeroides ATCC 17029 4898551 YP_001045060.1 CDS Rsph17029_3189 NC_009050.1 225814 226335 D KEGG: eli:ELI_14740 hypothetical protein; hypothetical protein 225814..226335 Rhodobacter sphaeroides ATCC 17029 4898552 YP_001045061.1 CDS Rsph17029_3190 NC_009050.1 226416 228542 R KEGG: mmc:Mmcs_4842 hypothetical protein; hypothetical protein complement(226416..228542) Rhodobacter sphaeroides ATCC 17029 4898704 YP_001045062.1 CDS Rsph17029_3191 NC_009050.1 228667 229713 R PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit complement(228667..229713) Rhodobacter sphaeroides ATCC 17029 4898705 YP_001045063.1 CDS Rsph17029_3192 NC_009050.1 229955 232741 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: sfu:Sfum_1438 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(229955..232741) Rhodobacter sphaeroides ATCC 17029 4898706 YP_001045064.1 CDS Rsph17029_3193 NC_009050.1 233396 233866 D hypothetical protein 233396..233866 Rhodobacter sphaeroides ATCC 17029 4898680 YP_001045065.1 CDS Rsph17029_3194 NC_009050.1 233973 235844 D KEGG: rpb:RPB_2536 hypothetical protein; hypothetical protein 233973..235844 Rhodobacter sphaeroides ATCC 17029 4898681 YP_001045066.1 CDS Rsph17029_3197 NC_009050.1 237743 238093 R PFAM: IS66 Orf2 family protein; KEGG: rle:pRL70161 putative transposase-related protein; IS66 Orf2 family protein complement(237743..238093) Rhodobacter sphaeroides ATCC 17029 4898910 YP_001045067.1 CDS Rsph17029_3198 NC_009050.1 238090 238497 R PFAM: transposase IS3/IS911 family protein; KEGG: ret:RHE_PA00103 putative insertion sequence transposase protein; transposase IS3/IS911 family protein complement(238090..238497) Rhodobacter sphaeroides ATCC 17029 4898911 YP_001045068.1 CDS Rsph17029_3199 NC_009050.1 238713 240041 D KEGG: bja:bll1926 hypothetical protein; hypothetical protein 238713..240041 Rhodobacter sphaeroides ATCC 17029 4898685 YP_001045069.1 CDS Rsph17029_3200 NC_009050.1 240038 242017 D KEGG: xac:XAC2444 hypothetical protein; ATPase-like protein 240038..242017 Rhodobacter sphaeroides ATCC 17029 4898686 YP_001045070.1 CDS Rsph17029_3201 NC_009050.1 242521 244353 R KEGG: rsp:RSP_2500 hypothetical protein; hypothetical protein complement(242521..244353) Rhodobacter sphaeroides ATCC 17029 4898687 YP_001045071.1 CDS Rsph17029_3202 NC_009050.1 244614 245642 R KEGG: rde:RD1_4047 transposition protein, putative; transposition protein complement(244614..245642) Rhodobacter sphaeroides ATCC 17029 4898562 YP_001045072.1 CDS Rsph17029_3203 NC_009050.1 246234 252605 R KEGG: rle:RL2132 hypothetical protein; superfamily I DNA/RNA helicase complement(246234..252605) Rhodobacter sphaeroides ATCC 17029 4898563 YP_001045073.1 CDS Rsph17029_3204 NC_009050.1 253005 253358 R hypothetical protein complement(253005..253358) Rhodobacter sphaeroides ATCC 17029 4898564 YP_001045074.1 CDS Rsph17029_3205 NC_009050.1 253793 254848 R KEGG: rpc:RPC_3216 hypothetical protein; hypothetical protein complement(253793..254848) Rhodobacter sphaeroides ATCC 17029 4898214 YP_001045075.1 CDS Rsph17029_3206 NC_009050.1 255005 256669 R KEGG: mca:MCA0474 ATP-dependent DNA helicase, UvrD/REP family; superfamily I DNA/RNA helicase-like protein complement(255005..256669) Rhodobacter sphaeroides ATCC 17029 4898215 YP_001045076.1 CDS Rsph17029_3207 NC_009050.1 256771 258030 D KEGG: ppu:PP_4447 hypothetical protein; hypothetical protein 256771..258030 Rhodobacter sphaeroides ATCC 17029 4898216 YP_001045077.1 CDS Rsph17029_3208 NC_009050.1 258040 259779 D KEGG: ppu:PP_4448 hypothetical protein; hypothetical protein 258040..259779 Rhodobacter sphaeroides ATCC 17029 4898157 YP_001045078.1 CDS Rsph17029_3209 NC_009050.1 261366 262058 D KEGG: rde:RD1_4051 hypothetical protein; hypothetical protein 261366..262058 Rhodobacter sphaeroides ATCC 17029 4898158 YP_001045079.1 CDS Rsph17029_3210 NC_009050.1 262055 264403 D PFAM: Integrase, catalytic region; KEGG: rde:RD1_4048 transposase, putative; integrase catalytic subunit 262055..264403 Rhodobacter sphaeroides ATCC 17029 4898159 YP_001045080.1 CDS Rsph17029_3211 NC_009050.1 264580 265005 R hypothetical protein complement(264580..265005) Rhodobacter sphaeroides ATCC 17029 4898505 YP_001045081.1 CDS Rsph17029_3212 NC_009050.1 265078 265566 R hypothetical protein complement(265078..265566) Rhodobacter sphaeroides ATCC 17029 4898506 YP_001045082.1 CDS Rsph17029_3213 NC_009050.1 265995 266948 R KEGG: rde:RD1_0796 transposition protein, putative; hypothetical protein complement(265995..266948) Rhodobacter sphaeroides ATCC 17029 4898507 YP_001045083.1 CDS Rsph17029_3214 NC_009050.1 266945 269287 R KEGG: rde:RD1_0797 transposase, putative; hypothetical protein complement(266945..269287) Rhodobacter sphaeroides ATCC 17029 4898688 YP_001045084.1 CDS Rsph17029_3215 NC_009050.1 269284 270189 R KEGG: bms:BR0728 hypothetical protein; hypothetical protein complement(269284..270189) Rhodobacter sphaeroides ATCC 17029 4898689 YP_001045085.1 CDS Rsph17029_3216 NC_009050.1 270597 271697 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rde:RD1_4059 Lon protease, putative; ATPase central domain-containing protein complement(270597..271697) Rhodobacter sphaeroides ATCC 17029 4898730 YP_001045086.1 CDS Rsph17029_3217 NC_009050.1 271707 272129 D hypothetical protein 271707..272129 Rhodobacter sphaeroides ATCC 17029 4898731 YP_001045087.1 CDS Rsph17029_3218 NC_009050.1 272126 272704 D hypothetical protein 272126..272704 Rhodobacter sphaeroides ATCC 17029 4898732 YP_001045088.1 CDS Rsph17029_3219 NC_009050.1 272921 273742 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: bbr:BB4812 hypothetical protein; hypothetical protein complement(272921..273742) Rhodobacter sphaeroides ATCC 17029 4898796 YP_001045089.1 CDS Rsph17029_3220 NC_009050.1 273863 275152 D KEGG: neu:NE1882 hypothetical protein; hypothetical protein 273863..275152 Rhodobacter sphaeroides ATCC 17029 4898797 YP_001045090.1 CDS Rsph17029_3221 NC_009050.1 275149 275676 D KEGG: net:Neut_1966 conserved hypothetical protein; hypothetical protein 275149..275676 Rhodobacter sphaeroides ATCC 17029 4898798 YP_001045091.1 CDS Rsph17029_3222 NC_009050.1 275968 276525 D KEGG: sil:SPO0624 hypothetical protein; hypothetical protein 275968..276525 Rhodobacter sphaeroides ATCC 17029 4898577 YP_001045092.1 CDS Rsph17029_3223 NC_009050.1 276807 278189 R PFAM: transposase, IS4 family protein; KEGG: rde:RD1_3444 transposase, putative; transposase, IS4 family protein complement(276807..278189) Rhodobacter sphaeroides ATCC 17029 4898578 YP_001045093.1 CDS Rsph17029_3224 NC_009050.1 279523 280839 D KEGG: rpe:RPE_1034 hypothetical protein; hypothetical protein 279523..280839 Rhodobacter sphaeroides ATCC 17029 4898579 YP_001045094.1 CDS Rsph17029_3225 NC_009050.1 282043 284490 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; EcoEI R, C-terminal domain protein; SMART: DEAD-like helicases-like; KEGG: nwi:Nwi_1255 DEAD/DEAH box helicase; EcoEI R domain-containing protein 282043..284490 Rhodobacter sphaeroides ATCC 17029 4898580 YP_001045095.1 CDS Rsph17029_3226 NC_009050.1 284495 285940 D PFAM: N-6 DNA methylase; KEGG: nwi:Nwi_1254 N-6 DNA methylase; N-6 DNA methylase 284495..285940 Rhodobacter sphaeroides ATCC 17029 4898581 YP_001045096.1 CDS Rsph17029_3227 NC_009050.1 285937 287664 D PFAM: restriction modification system DNA specificity domain; KEGG: nwi:Nwi_1253 type I restriction enzyme EcoAI specificity protein; restriction modification system DNA specificity subunit 285937..287664 Rhodobacter sphaeroides ATCC 17029 4898582 YP_001045097.1 CDS Rsph17029_3228 NC_009050.1 287661 288602 D hypothetical protein 287661..288602 Rhodobacter sphaeroides ATCC 17029 4898682 YP_001045098.1 CDS Rsph17029_3229 NC_009050.1 288903 290735 D KEGG: nha:Nham_2090 hypothetical protein; hypothetical protein 288903..290735 Rhodobacter sphaeroides ATCC 17029 4898683 YP_001045099.1 CDS Rsph17029_3230 NC_009050.1 290885 293152 R TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; KEGG: rsp:RSP_3547 ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(290885..293152) Rhodobacter sphaeroides ATCC 17029 4898684 YP_001045100.1 CDS Rsph17029_3231 NC_009050.1 293304 293735 D PFAM: Uncharacterised conserved protein UCP032025; KEGG: rsp:RSP_3548 hypothetical protein; hypothetical protein 293304..293735 Rhodobacter sphaeroides ATCC 17029 4898230 YP_001045101.1 CDS hisG NC_009050.1 293728 294438 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(293728..294438) Rhodobacter sphaeroides ATCC 17029 4898231 YP_001045102.1 CDS hisS NC_009050.1 295530 297161 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(295530..297161) Rhodobacter sphaeroides ATCC 17029 4898988 YP_001045103.1 CDS Rsph17029_3235 NC_009050.1 297249 297449 D KEGG: rsp:RSP_3552 SlyX protein; SlyX protein 297249..297449 Rhodobacter sphaeroides ATCC 17029 4898138 YP_001045104.1 CDS dnaE NC_009050.1 297592 301083 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(297592..301083) Rhodobacter sphaeroides ATCC 17029 4898139 YP_001045105.1 CDS Rsph17029_3237 NC_009050.1 301266 302723 D PFAM: ferredoxin; molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: rsp:RSP_3554 xanthine dehydrogenase, small subunit; molybdopterin dehydrogenase 301266..302723 Rhodobacter sphaeroides ATCC 17029 4898148 YP_001045106.1 CDS Rsph17029_3238 NC_009050.1 302720 305197 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3555 xanthine dehydrogenase, large subunit; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 302720..305197 Rhodobacter sphaeroides ATCC 17029 4898149 YP_001045107.1 CDS Rsph17029_3239 NC_009050.1 305190 306131 D PFAM: protein of unknown function DUF182; KEGG: rsp:RSP_3556 xanthine dehydrogenase chaperone/MPT insertion protein; hypothetical protein 305190..306131 Rhodobacter sphaeroides ATCC 17029 4898150 YP_001045108.1 CDS Rsph17029_3240 NC_009050.1 306128 307651 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3557 ABC transporter, fused ATPase domains; ABC transporter 306128..307651 Rhodobacter sphaeroides ATCC 17029 4898217 YP_001045109.1 CDS Rsph17029_3241 NC_009050.1 307670 308752 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3558 ABC transporter, inner membrane subunit; inner-membrane translocator 307670..308752 Rhodobacter sphaeroides ATCC 17029 4898218 YP_001045110.1 CDS Rsph17029_3242 NC_009050.1 308752 309684 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3559 ABC transporter, inner membrane subunit; inner-membrane translocator 308752..309684 Rhodobacter sphaeroides ATCC 17029 4898219 YP_001045111.1 CDS Rsph17029_3243 NC_009050.1 309731 310825 D PFAM: basic membrane lipoprotein; KEGG: rsp:RSP_3560 possible ABC transporter, periplasmic binding protein; basic membrane lipoprotein 309731..310825 Rhodobacter sphaeroides ATCC 17029 4899032 YP_001045112.1 CDS Rsph17029_3244 NC_009050.1 311053 311610 D KEGG: rsp:RSP_3561 hypothetical protein; hypothetical protein 311053..311610 Rhodobacter sphaeroides ATCC 17029 4899033 YP_001045113.1 CDS Rsph17029_3245 NC_009050.1 311643 312923 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3562 sulfide-quinone reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 311643..312923 Rhodobacter sphaeroides ATCC 17029 4899034 YP_001045114.1 CDS Rsph17029_3246 NC_009050.1 312928 314034 D PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3563 putative FAD-dependent glycerol-3-phosphate dehydrogenase protein; FAD dependent oxidoreductase 312928..314034 Rhodobacter sphaeroides ATCC 17029 4898115 YP_001045115.1 CDS Rsph17029_3247 NC_009050.1 314031 314666 D PFAM: protein of unknown function DUF938; KEGG: rsp:RSP_3564 generic methyltransferase; hypothetical protein 314031..314666 Rhodobacter sphaeroides ATCC 17029 4898116 YP_001045116.1 CDS Rsph17029_3248 NC_009050.1 314933 315724 D PFAM: glycoside hydrolase, family 25; KEGG: rsp:RSP_3565 glycoside hydrolase, family 25; glycoside hydrolase family protein 314933..315724 Rhodobacter sphaeroides ATCC 17029 4898117 YP_001045117.1 CDS Rsph17029_3249 NC_009050.1 315809 318304 R PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; KEGG: rsp:RSP_3566 dimethylglycine dehydrogenase; FAD dependent oxidoreductase complement(315809..318304) Rhodobacter sphaeroides ATCC 17029 4898275 YP_001045118.1 CDS Rsph17029_3250 NC_009050.1 318539 319321 R PFAM: transport system permease protein; ABC-3 protein; KEGG: rsp:RSP_3567 ABC zinc tranporter, inner membrane subunit ZnuB; ABC-3 protein complement(318539..319321) Rhodobacter sphaeroides ATCC 17029 4898276 YP_001045119.1 CDS Rsph17029_3251 NC_009050.1 319314 320045 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3568 ABC zinc transporter, ATPase subunit ZnuC; ABC transporter complement(319314..320045) Rhodobacter sphaeroides ATCC 17029 4898277 YP_001045120.1 CDS Rsph17029_3252 NC_009050.1 320042 320533 R KEGG: rsp:RSP_3569 zinc-uptake regulator, Zur; ferric uptake regulator family protein complement(320042..320533) Rhodobacter sphaeroides ATCC 17029 4899190 YP_001045121.1 CDS Rsph17029_3253 NC_009050.1 320602 321645 D PFAM: periplasmic solute binding protein; KEGG: rsp:RSP_3571 ABC zinc transporter, periplasmic binding protein ZnuA; periplasmic solute binding protein 320602..321645 Rhodobacter sphaeroides ATCC 17029 4899191 YP_001045122.1 CDS Rsph17029_3254 NC_009050.1 321694 322677 D PFAM: Aldose 1-epimerase; KEGG: rsp:RSP_3572 putative aldose 1-epimerase protein; aldose 1-epimerase 321694..322677 Rhodobacter sphaeroides ATCC 17029 4899192 YP_001045123.1 CDS Rsph17029_3255 NC_009050.1 322891 323103 D involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA 322891..323103 Rhodobacter sphaeroides ATCC 17029 4899142 YP_001045124.1 CDS Rsph17029_3256 NC_009050.1 323112 324683 R PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rsp:RSP_3574 putative histidine ammonia-lyase; histidine ammonia-lyase complement(323112..324683) Rhodobacter sphaeroides ATCC 17029 4899183 YP_001045125.1 CDS Rsph17029_3257 NC_009050.1 324747 325079 R PFAM: Gas vesicle K; KEGG: rsp:RSP_3575 putative gas vesicle synthesis protein; gas vesicle K complement(324747..325079) Rhodobacter sphaeroides ATCC 17029 4899184 YP_001045126.1 CDS Rsph17029_3258 NC_009050.1 325076 325702 R KEGG: rsp:RSP_6183 hypothetical protein; hypothetical protein complement(325076..325702) Rhodobacter sphaeroides ATCC 17029 4899029 YP_001045127.1 CDS Rsph17029_3259 NC_009050.1 325895 326593 R KEGG: rsp:RSP_6233 gas vesicle operon protein; gas vesicle operon protein complement(325895..326593) Rhodobacter sphaeroides ATCC 17029 4899030 YP_001045128.1 CDS Rsph17029_3260 NC_009050.1 326590 327465 R PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: rsp:RSP_3576 hypothetical protein; gas vesicle synthesis GvpLGvpF complement(326590..327465) Rhodobacter sphaeroides ATCC 17029 4899031 YP_001045129.1 CDS Rsph17029_3261 NC_009050.1 327719 327952 R KEGG: rsp:RSP_3577 putative gas vesicle synthesis protein; putative gas vesicle synthesis protein complement(327719..327952) Rhodobacter sphaeroides ATCC 17029 4898825 YP_001045130.1 CDS Rsph17029_3262 NC_009050.1 327952 328716 R PFAM: Gas vesicle synthesis GvpLGvpF; KEGG: rsp:RSP_3578 putative gas vesicle synthesis protein; gas vesicle synthesis GvpLGvpF complement(327952..328716) Rhodobacter sphaeroides ATCC 17029 4898826 YP_001045131.1 CDS Rsph17029_3263 NC_009050.1 328713 329246 R KEGG: rsp:RSP_3579 heat shock protein HSP20; heat shock protein HSP20 complement(328713..329246) Rhodobacter sphaeroides ATCC 17029 4898827 YP_001045132.1 CDS Rsph17029_3264 NC_009050.1 329248 329562 R PFAM: gas vesicle protein GVPa; KEGG: rsp:RSP_3580 gas vesicle protein GVPa; gas vesicle protein GvpA complement(329248..329562) Rhodobacter sphaeroides ATCC 17029 4898439 YP_001045133.1 CDS Rsph17029_3265 NC_009050.1 329559 329870 R PFAM: Gas vesicle synthesis family protein; KEGG: rsp:RSP_3581 hypothetical protein; gas vesicle synthesis family protein complement(329559..329870) Rhodobacter sphaeroides ATCC 17029 4898440 YP_001045134.1 CDS Rsph17029_3266 NC_009050.1 329884 330108 R KEGG: rsp:RSP_6184 hypothetical protein; hypothetical protein complement(329884..330108) Rhodobacter sphaeroides ATCC 17029 4898441 YP_001045135.1 CDS Rsph17029_3267 NC_009050.1 330105 331055 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3582 ATPase; ATPase complement(330105..331055) Rhodobacter sphaeroides ATCC 17029 4898133 YP_001045136.1 CDS Rsph17029_3268 NC_009050.1 331163 332383 R PFAM: protein of unknown function DUF989; KEGG: rsp:RSP_3583 class I monoheme cytochrome c; hypothetical protein complement(331163..332383) Rhodobacter sphaeroides ATCC 17029 4898134 YP_001045137.1 CDS Rsph17029_3269 NC_009050.1 332588 332959 D KEGG: rsp:RSP_3584 hypothetical protein; hypothetical protein 332588..332959 Rhodobacter sphaeroides ATCC 17029 4898724 YP_001045138.1 CDS Rsph17029_3270 NC_009050.1 333049 334278 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(333049..334278) Rhodobacter sphaeroides ATCC 17029 4898725 YP_001045139.1 CDS Rsph17029_3271 NC_009050.1 334293 334739 R PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_3586 putative aromatic pathway regulator; N-acetyltransferase GCN5 complement(334293..334739) Rhodobacter sphaeroides ATCC 17029 4898726 YP_001045140.1 CDS Rsph17029_3272 NC_009050.1 334736 335374 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(334736..335374) Rhodobacter sphaeroides ATCC 17029 4898895 YP_001045141.1 CDS Rsph17029_3273 NC_009050.1 335374 335754 R KEGG: rsp:RSP_3588 hypothetical protein; hypothetical protein complement(335374..335754) Rhodobacter sphaeroides ATCC 17029 4898896 YP_001045142.1 CDS ihfB NC_009050.1 335795 336076 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta complement(335795..336076) Rhodobacter sphaeroides ATCC 17029 4898897 YP_001045143.1 CDS rpsA NC_009050.1 336251 337936 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(336251..337936) Rhodobacter sphaeroides ATCC 17029 4898278 YP_001045144.1 CDS cmk NC_009050.1 338044 338679 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(338044..338679) Rhodobacter sphaeroides ATCC 17029 4898279 YP_001045145.1 CDS Rsph17029_3277 NC_009050.1 338736 340073 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(338736..340073) Rhodobacter sphaeroides ATCC 17029 4898280 YP_001045146.1 CDS trmB NC_009050.1 340290 341015 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(340290..341015) Rhodobacter sphaeroides ATCC 17029 4898281 YP_001045147.1 CDS Rsph17029_3279 NC_009050.1 341281 341817 D KEGG: rsp:RSP_3594 antifreeze protein, type I; antifreeze protein, type I 341281..341817 Rhodobacter sphaeroides ATCC 17029 4898282 YP_001045148.1 CDS Rsph17029_3280 NC_009050.1 341947 343113 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(341947..343113) Rhodobacter sphaeroides ATCC 17029 4898283 YP_001045149.1 CDS Rsph17029_3281 NC_009050.1 343202 344689 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3596 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(343202..344689) Rhodobacter sphaeroides ATCC 17029 4898733 YP_001045150.1 CDS Rsph17029_3282 NC_009050.1 344857 345804 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: rsp:RSP_3597 CorC/HlyC family protein with CBS domains; hypothetical protein complement(344857..345804) Rhodobacter sphaeroides ATCC 17029 4898734 YP_001045151.1 CDS Rsph17029_3283 NC_009050.1 345844 346347 R PFAM: protein of unknown function UPF0054; KEGG: rsp:RSP_3598 hypothetical protein; hypothetical protein complement(345844..346347) Rhodobacter sphaeroides ATCC 17029 4898735 YP_001045152.1 CDS Rsph17029_3284 NC_009050.1 346331 347371 R PFAM: PhoH family protein; KEGG: rsp:RSP_3599 hypothetical protein; PhoH family protein complement(346331..347371) Rhodobacter sphaeroides ATCC 17029 4898848 YP_001045153.1 CDS Rsph17029_3285 NC_009050.1 347514 348824 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(347514..348824) Rhodobacter sphaeroides ATCC 17029 4898849 YP_001045154.1 CDS Rsph17029_3286 NC_009050.1 348996 349622 R PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rsp:RSP_3601 lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(348996..349622) Rhodobacter sphaeroides ATCC 17029 4898850 YP_001045155.1 CDS Rsph17029_3287 NC_009050.1 349681 350370 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3602 ABC efflux transporter, ATPase subunit; ABC transporter 349681..350370 Rhodobacter sphaeroides ATCC 17029 4898779 YP_001045156.1 CDS Rsph17029_3288 NC_009050.1 350367 352874 D PFAM: protein of unknown function DUF214; KEGG: rsp:RSP_3603 possible ABC efflux tranporter, fused inner membrane domains; hypothetical protein 350367..352874 Rhodobacter sphaeroides ATCC 17029 4898780 YP_001045157.1 CDS Rsph17029_3289 NC_009050.1 352876 353292 D KEGG: rsp:RSP_6185 hypothetical protein; hypothetical protein 352876..353292 Rhodobacter sphaeroides ATCC 17029 4898493 YP_001045158.1 CDS Rsph17029_3290 NC_009050.1 353614 354666 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 353614..354666 Rhodobacter sphaeroides ATCC 17029 4898494 YP_001045159.1 CDS Rsph17029_3291 NC_009050.1 354667 355767 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3605 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 354667..355767 Rhodobacter sphaeroides ATCC 17029 4898495 YP_001045160.1 CDS Rsph17029_3292 NC_009050.1 355855 357153 D TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; KEGG: rsp:RSP_3606 sigma54-2 (RNA polymerase sigma-54 factor); RNA polymerase sigma 54 subunit RpoN 355855..357153 Rhodobacter sphaeroides ATCC 17029 4898312 YP_001045161.1 CDS Rsph17029_3293 NC_009050.1 357253 359280 D PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rsp:RSP_3607 hypothetical protein; hydantoinase/oxoprolinase 357253..359280 Rhodobacter sphaeroides ATCC 17029 4898313 YP_001045162.1 CDS Rsph17029_3294 NC_009050.1 359389 360471 R PFAM: phage integrase family protein; KEGG: rsp:RSP_3623 putative integrase; phage integrase family protein complement(359389..360471) Rhodobacter sphaeroides ATCC 17029 4898245 YP_001045163.1 CDS Rsph17029_3295 NC_009050.1 360652 360906 R hypothetical protein complement(360652..360906) Rhodobacter sphaeroides ATCC 17029 4898130 YP_001045164.1 CDS Rsph17029_3296 NC_009050.1 360903 361664 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: nwi:Nwi_0847 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein complement(360903..361664) Rhodobacter sphaeroides ATCC 17029 4898131 YP_001045165.1 CDS Rsph17029_3297 NC_009050.1 361661 362320 R KEGG: rsp:RSP_3624 hypothetical protein; hypothetical protein complement(361661..362320) Rhodobacter sphaeroides ATCC 17029 4898132 YP_001045166.1 CDS Rsph17029_3298 NC_009050.1 362495 362737 R hypothetical protein complement(362495..362737) Rhodobacter sphaeroides ATCC 17029 4899108 YP_001045167.1 CDS Rsph17029_3299 NC_009050.1 362742 363002 R KEGG: rsp:RSP_3794 hypothetical protein; hypothetical protein complement(362742..363002) Rhodobacter sphaeroides ATCC 17029 4899109 YP_001045168.1 CDS Rsph17029_3300 NC_009050.1 363489 363767 R hypothetical protein complement(363489..363767) Rhodobacter sphaeroides ATCC 17029 4899110 YP_001045169.1 CDS Rsph17029_3301 NC_009050.1 363764 364027 R KEGG: nwi:Nwi_1563 hypothetical protein; hypothetical protein complement(363764..364027) Rhodobacter sphaeroides ATCC 17029 4898972 YP_001045170.1 CDS Rsph17029_3302 NC_009050.1 364267 365115 R KEGG: rsp:RSP_3796 hypothetical protein; hypothetical protein complement(364267..365115) Rhodobacter sphaeroides ATCC 17029 4898973 YP_001045171.1 CDS Rsph17029_3303 NC_009050.1 365138 365464 R KEGG: rsp:RSP_3797 hypothetical protein; hypothetical protein complement(365138..365464) Rhodobacter sphaeroides ATCC 17029 4898974 YP_001045172.1 CDS Rsph17029_3304 NC_009050.1 365577 365909 R KEGG: rsp:RSP_3799 hypothetical protein; hypothetical protein complement(365577..365909) Rhodobacter sphaeroides ATCC 17029 4898160 YP_001045173.1 CDS Rsph17029_3305 NC_009050.1 367132 367392 D KEGG: rsp:RSP_3772 hypothetical protein; hypothetical protein 367132..367392 Rhodobacter sphaeroides ATCC 17029 4898161 YP_001045174.1 CDS Rsph17029_3306 NC_009050.1 367389 367640 D KEGG: rsp:RSP_3773 hypothetical protein; hypothetical protein 367389..367640 Rhodobacter sphaeroides ATCC 17029 4898162 YP_001045175.1 CDS Rsph17029_3307 NC_009050.1 367783 368301 D KEGG: rsp:RSP_3774 hypothetical protein; hypothetical protein 367783..368301 Rhodobacter sphaeroides ATCC 17029 4899044 YP_001045176.1 CDS Rsph17029_3308 NC_009050.1 368298 368765 D KEGG: rsp:RSP_3775 hypothetical protein; hypothetical protein 368298..368765 Rhodobacter sphaeroides ATCC 17029 4899045 YP_001045177.1 CDS Rsph17029_3309 NC_009050.1 368762 369055 D PFAM: Chromosomal replication initiator, DnaA C-terminal domain; KEGG: rsp:RSP_6202 hypothetical protein; chromosomal replication initiator DnaA domain-containing protein 368762..369055 Rhodobacter sphaeroides ATCC 17029 4898356 YP_001045178.1 CDS Rsph17029_3310 NC_009050.1 369045 369689 D KEGG: rsp:RSP_2074 hypothetical protein; hypothetical protein 369045..369689 Rhodobacter sphaeroides ATCC 17029 4898357 YP_001045179.1 CDS Rsph17029_3311 NC_009050.1 369898 370482 D KEGG: rsp:RSP_3777 hypothetical protein; hypothetical protein 369898..370482 Rhodobacter sphaeroides ATCC 17029 4898358 YP_001045180.1 CDS Rsph17029_3312 NC_009050.1 370479 371141 D KEGG: rsp:RSP_6033 hypothetical protein; hypothetical protein 370479..371141 Rhodobacter sphaeroides ATCC 17029 4898109 YP_001045181.1 CDS Rsph17029_3313 NC_009050.1 371248 372147 D PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rsp:RSP_2072 putative phage-related holin protein; HNH endonuclease 371248..372147 Rhodobacter sphaeroides ATCC 17029 4898110 YP_001045182.1 CDS Rsph17029_3314 NC_009050.1 372190 372666 D KEGG: rsp:RSP_2071 hypothetical protein; hypothetical protein 372190..372666 Rhodobacter sphaeroides ATCC 17029 4898111 YP_001045183.1 CDS Rsph17029_3315 NC_009050.1 372668 374377 D PFAM: phage Terminase; KEGG: rsp:RSP_2070 putative phage-related terminase; phage terminase 372668..374377 Rhodobacter sphaeroides ATCC 17029 4898268 YP_001045184.1 CDS Rsph17029_3316 NC_009050.1 374377 375627 D TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rsp:RSP_2069 putative phage portal protein, HK97 family; HK97 family phage portal protein 374377..375627 Rhodobacter sphaeroides ATCC 17029 4898269 YP_001045185.1 CDS Rsph17029_3317 NC_009050.1 375624 376463 D PFAM: peptidase S14, ClpP; KEGG: rsp:RSP_2068 putative ClpP-like protease; peptidase S14, ClpP 375624..376463 Rhodobacter sphaeroides ATCC 17029 4898270 YP_001045186.1 CDS Rsph17029_3318 NC_009050.1 376476 377777 D TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: rsp:RSP_2067 putative prophage LambdaSo, major capsid protein, HK97 family; HK97 family phage major capsid protein 376476..377777 Rhodobacter sphaeroides ATCC 17029 4898538 YP_001045187.1 CDS Rsph17029_3319 NC_009050.1 377848 378258 D KEGG: rsp:RSP_6032 potential TolA; hypothetical protein 377848..378258 Rhodobacter sphaeroides ATCC 17029 4898539 YP_001045188.1 CDS Rsph17029_3320 NC_009050.1 378255 378596 D KEGG: rsp:RSP_6031 hypothetical protein; hypothetical protein 378255..378596 Rhodobacter sphaeroides ATCC 17029 4898540 YP_001045189.1 CDS Rsph17029_3321 NC_009050.1 378593 378928 D TIGRFAM: phage head-tail adaptor, putative; KEGG: rsp:RSP_2066 hypothetical protein; phage head-tail adaptor, putative 378593..378928 Rhodobacter sphaeroides ATCC 17029 4898370 YP_001045190.1 CDS Rsph17029_3322 NC_009050.1 379043 379603 D TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: rsp:RSP_2065 hypothetical protein; HK97 family phage protein 379043..379603 Rhodobacter sphaeroides ATCC 17029 4898371 YP_001045191.1 CDS Rsph17029_3323 NC_009050.1 379600 379749 D KEGG: rsp:RSP_6013 hypothetical protein; hypothetical protein 379600..379749 Rhodobacter sphaeroides ATCC 17029 4898372 YP_001045192.1 CDS Rsph17029_3324 NC_009050.1 379935 380315 D KEGG: rsp:RSP_2064 hypothetical protein; hypothetical protein 379935..380315 Rhodobacter sphaeroides ATCC 17029 4899072 YP_001045193.1 CDS Rsph17029_3325 NC_009050.1 380325 380768 D KEGG: rsp:RSP_2063 hypothetical protein; hypothetical protein 380325..380768 Rhodobacter sphaeroides ATCC 17029 4899073 YP_001045194.1 CDS Rsph17029_3326 NC_009050.1 380765 381145 D KEGG: rsp:RSP_2062 hypothetical protein; hypothetical protein 380765..381145 Rhodobacter sphaeroides ATCC 17029 4899074 YP_001045195.1 CDS Rsph17029_3327 NC_009050.1 381220 381465 D KEGG: rsp:RSP_1637 hypothetical protein; hypothetical protein 381220..381465 Rhodobacter sphaeroides ATCC 17029 4898271 YP_001045196.1 CDS Rsph17029_3328 NC_009050.1 381827 386725 D KEGG: rsp:RSP_3791 hypothetical protein; hypothetical protein 381827..386725 Rhodobacter sphaeroides ATCC 17029 4898272 YP_001045197.1 CDS Rsph17029_3329 NC_009050.1 386725 387615 D KEGG: rsp:RSP_1635 hypothetical protein; hypothetical protein 386725..387615 Rhodobacter sphaeroides ATCC 17029 4899105 YP_001045198.1 CDS Rsph17029_3330 NC_009050.1 387632 389116 D KEGG: rsp:RSP_1633 hypothetical protein; hypothetical protein 387632..389116 Rhodobacter sphaeroides ATCC 17029 4899106 YP_001045199.1 CDS Rsph17029_3331 NC_009050.1 389123 389440 D KEGG: rsp:RSP_1632 hypothetical protein; hypothetical protein 389123..389440 Rhodobacter sphaeroides ATCC 17029 4899107 YP_001045200.1 CDS Rsph17029_3332 NC_009050.1 389444 389782 D KEGG: rsp:RSP_1631 hypothetical protein; hypothetical protein 389444..389782 Rhodobacter sphaeroides ATCC 17029 4898878 YP_001045201.1 CDS Rsph17029_3333 NC_009050.1 389779 390147 D hypothetical protein 389779..390147 Rhodobacter sphaeroides ATCC 17029 4898879 YP_001045202.1 CDS Rsph17029_3334 NC_009050.1 390150 390602 D hypothetical protein 390150..390602 Rhodobacter sphaeroides ATCC 17029 4898880 YP_001045203.1 CDS Rsph17029_3335 NC_009050.1 390606 390959 D hypothetical protein 390606..390959 Rhodobacter sphaeroides ATCC 17029 4899171 YP_001045204.1 CDS Rsph17029_3336 NC_009050.1 391026 391826 D KEGG: rsp:RSP_2050 hypothetical protein; hypothetical protein 391026..391826 Rhodobacter sphaeroides ATCC 17029 4899172 YP_001045205.1 CDS Rsph17029_3337 NC_009050.1 391839 392336 D KEGG: rsp:RSP_3761 hypothetical protein; hypothetical protein 391839..392336 Rhodobacter sphaeroides ATCC 17029 4899173 YP_001045206.1 CDS Rsph17029_3338 NC_009050.1 392481 392825 D hypothetical protein 392481..392825 Rhodobacter sphaeroides ATCC 17029 4898765 YP_001045207.1 CDS Rsph17029_3339 NC_009050.1 392827 393303 D PFAM: Collagen triple helix repeat; KEGG: rno:353303 procollagen, type XXIII, alpha 1; triple helix repeat-containing collagen 392827..393303 Rhodobacter sphaeroides ATCC 17029 4898766 YP_001045208.1 CDS Rsph17029_3340 NC_009050.1 393296 395206 D hypothetical protein 393296..395206 Rhodobacter sphaeroides ATCC 17029 4898767 YP_001045209.1 CDS Rsph17029_3341 NC_009050.1 395220 396110 D hypothetical protein 395220..396110 Rhodobacter sphaeroides ATCC 17029 4898787 YP_001045210.1 CDS Rsph17029_3342 NC_009050.1 396172 396567 R PFAM: protein of unknown function UPF0150; KEGG: rsp:RSP_2748 possible transcriptional regulator, CopG family; hypothetical protein complement(396172..396567) Rhodobacter sphaeroides ATCC 17029 4898788 YP_001045211.1 CDS Rsph17029_3343 NC_009050.1 396619 396807 R PFAM: YcfA family protein; KEGG: mmr:Mmar10_2094 YcfA family protein; hypothetical protein complement(396619..396807) Rhodobacter sphaeroides ATCC 17029 4898789 YP_001045212.1 CDS Rsph17029_3344 NC_009050.1 397065 398147 R PFAM: phage integrase family protein; KEGG: rsp:RSP_3623 putative integrase; phage integrase family protein complement(397065..398147) Rhodobacter sphaeroides ATCC 17029 4898406 YP_001045213.1 CDS Rsph17029_3345 NC_009050.1 398702 400513 R PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_2079 hypothetical protein; nuclease complement(398702..400513) Rhodobacter sphaeroides ATCC 17029 4898407 YP_001045214.1 CDS Rsph17029_3346 NC_009050.1 400638 401033 R KEGG: rsp:RSP_2078 hypothetical protein; hypothetical protein complement(400638..401033) Rhodobacter sphaeroides ATCC 17029 4898408 YP_001045215.1 CDS Rsph17029_3347 NC_009050.1 401033 401365 R KEGG: rsp:RSP_1658 hypothetical protein; hypothetical protein complement(401033..401365) Rhodobacter sphaeroides ATCC 17029 4898382 YP_001045216.1 CDS Rsph17029_3348 NC_009050.1 401362 401559 R KEGG: rsp:RSP_6187 hypothetical protein; hypothetical protein complement(401362..401559) Rhodobacter sphaeroides ATCC 17029 4898383 YP_001045217.1 CDS Rsph17029_3349 NC_009050.1 401898 402245 R PFAM: helix-turn-helix domain protein; KEGG: hch:HCH_06281 predicted transcriptional regulator; XRE family transcriptional regulator complement(401898..402245) Rhodobacter sphaeroides ATCC 17029 4898433 YP_001045218.1 CDS Rsph17029_3350 NC_009050.1 402657 402914 D KEGG: rsp:RSP_6035 hypothetical protein; hypothetical protein 402657..402914 Rhodobacter sphaeroides ATCC 17029 4898434 YP_001045219.1 CDS Rsph17029_3351 NC_009050.1 403072 403707 D KEGG: rsp:RSP_3611 hypothetical protein; hypothetical protein 403072..403707 Rhodobacter sphaeroides ATCC 17029 4898435 YP_001045220.1 CDS Rsph17029_3352 NC_009050.1 403741 404403 D KEGG: rsp:RSP_3612 hypothetical protein; hypothetical protein 403741..404403 Rhodobacter sphaeroides ATCC 17029 4898342 YP_001045221.1 CDS Rsph17029_3353 NC_009050.1 404602 405180 D KEGG: rsp:RSP_1654 hypothetical protein; hypothetical protein 404602..405180 Rhodobacter sphaeroides ATCC 17029 4898343 YP_001045222.1 CDS Rsph17029_3354 NC_009050.1 405177 405839 D KEGG: rsp:RSP_6033 hypothetical protein; hypothetical protein 405177..405839 Rhodobacter sphaeroides ATCC 17029 4898344 YP_001045223.1 CDS Rsph17029_3355 NC_009050.1 405931 406647 D KEGG: rsp:RSP_3779 hypothetical protein; hypothetical protein 405931..406647 Rhodobacter sphaeroides ATCC 17029 4898451 YP_001045224.1 CDS Rsph17029_3356 NC_009050.1 406845 407432 D KEGG: rsp:RSP_3780 hypothetical protein; hypothetical protein 406845..407432 Rhodobacter sphaeroides ATCC 17029 4898452 YP_001045225.1 CDS Rsph17029_3357 NC_009050.1 407432 409594 D PFAM: phage terminase GpA; KEGG: rsp:RSP_3781 putative phage terminase large subunit; phage terminase GpA 407432..409594 Rhodobacter sphaeroides ATCC 17029 4898453 YP_001045226.1 CDS Rsph17029_3358 NC_009050.1 409591 409800 D KEGG: rsp:RSP_3782 hypothetical protein; hypothetical protein 409591..409800 Rhodobacter sphaeroides ATCC 17029 4898940 YP_001045227.1 CDS Rsph17029_3359 NC_009050.1 409800 411290 D TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein, lambda; KEGG: rsp:RSP_3783 putative bacteriophage-related protein, phage portal protein, lambda family; lambda family phage portal protein 409800..411290 Rhodobacter sphaeroides ATCC 17029 4898941 YP_001045228.1 CDS Rsph17029_3360 NC_009050.1 411287 412642 D PFAM: peptidase S49; KEGG: rsp:RSP_3627 periplasmic serine protease; peptidase S49 411287..412642 Rhodobacter sphaeroides ATCC 17029 4898942 YP_001045229.1 CDS Rsph17029_3361 NC_009050.1 412775 413164 D KEGG: rsp:RSP_6201 hypothetical protein; hypothetical protein 412775..413164 Rhodobacter sphaeroides ATCC 17029 4898236 YP_001045230.1 CDS Rsph17029_3362 NC_009050.1 413245 414267 D KEGG: rsp:RSP_3785 putative bacteriophage-related protein; bacteriophage-like protein 413245..414267 Rhodobacter sphaeroides ATCC 17029 4898237 YP_001045231.1 CDS Rsph17029_3363 NC_009050.1 414278 414604 D KEGG: rsp:RSP_3786 hypothetical protein; hypothetical protein 414278..414604 Rhodobacter sphaeroides ATCC 17029 4898238 YP_001045232.1 CDS Rsph17029_3364 NC_009050.1 414601 415023 D KEGG: rsp:RSP_6200 hypothetical protein; hypothetical protein 414601..415023 Rhodobacter sphaeroides ATCC 17029 4898163 YP_001045233.1 CDS Rsph17029_3365 NC_009050.1 415134 415604 D KEGG: rsp:RSP_3787 hypothetical protein; hypothetical protein 415134..415604 Rhodobacter sphaeroides ATCC 17029 4898164 YP_001045234.1 CDS Rsph17029_3366 NC_009050.1 415706 416146 D KEGG: rsp:RSP_3788 hypothetical protein; hypothetical protein 415706..416146 Rhodobacter sphaeroides ATCC 17029 4898165 YP_001045235.1 CDS Rsph17029_3367 NC_009050.1 416209 416571 D KEGG: sit:TM1040_1660 hypothetical protein; hypothetical protein 416209..416571 Rhodobacter sphaeroides ATCC 17029 4898623 YP_001045236.1 CDS Rsph17029_3368 NC_009050.1 416620 421794 D KEGG: rsp:RSP_3791 hypothetical protein; hypothetical protein 416620..421794 Rhodobacter sphaeroides ATCC 17029 4898624 YP_001045237.1 CDS Rsph17029_3369 NC_009050.1 421794 422684 D KEGG: rsp:RSP_2058 hypothetical protein; hypothetical protein 421794..422684 Rhodobacter sphaeroides ATCC 17029 4899035 YP_001045238.1 CDS Rsph17029_3370 NC_009050.1 422700 424184 D KEGG: rsp:RSP_1633 hypothetical protein; hypothetical protein 422700..424184 Rhodobacter sphaeroides ATCC 17029 4899036 YP_001045239.1 CDS Rsph17029_3371 NC_009050.1 424191 424508 D KEGG: rsp:RSP_1632 hypothetical protein; hypothetical protein 424191..424508 Rhodobacter sphaeroides ATCC 17029 4899037 YP_001045240.1 CDS Rsph17029_3372 NC_009050.1 424512 424847 D KEGG: rsp:RSP_1631 hypothetical protein; hypothetical protein 424512..424847 Rhodobacter sphaeroides ATCC 17029 4898836 YP_001045241.1 CDS Rsph17029_3373 NC_009050.1 425080 425397 D KEGG: rsp:RSP_3767 hypothetical protein; hypothetical protein 425080..425397 Rhodobacter sphaeroides ATCC 17029 4898837 YP_001045242.1 CDS Rsph17029_3374 NC_009050.1 425596 425973 D hypothetical protein 425596..425973 Rhodobacter sphaeroides ATCC 17029 4898838 YP_001045243.1 CDS Rsph17029_3375 NC_009050.1 426231 426728 R hypothetical protein complement(426231..426728) Rhodobacter sphaeroides ATCC 17029 4898535 YP_001045244.1 CDS Rsph17029_3376 NC_009050.1 427065 427871 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rsp:RSP_2052 N6 adenine-specific DNA methyltransferase, D12 class; D12 class N6 adenine-specific DNA methyltransferase 427065..427871 Rhodobacter sphaeroides ATCC 17029 4898536 YP_001045245.1 CDS Rsph17029_3377 NC_009050.1 427926 428735 D KEGG: rsp:RSP_3760 hypothetical protein; hypothetical protein 427926..428735 Rhodobacter sphaeroides ATCC 17029 4898537 YP_001045246.1 CDS Rsph17029_3378 NC_009050.1 428748 429230 D KEGG: rsp:RSP_3761 hypothetical protein; hypothetical protein 428748..429230 Rhodobacter sphaeroides ATCC 17029 4898547 YP_001045247.1 CDS Rsph17029_3379 NC_009050.1 429480 430289 R KEGG: aci:ACIAD2953 hypothetical protein; hypothetical protein complement(429480..430289) Rhodobacter sphaeroides ATCC 17029 4898548 YP_001045248.1 CDS Rsph17029_3380 NC_009050.1 430292 433903 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: nha:Nham_4464 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase complement(430292..433903) Rhodobacter sphaeroides ATCC 17029 4898549 YP_001045249.1 CDS Rsph17029_3381 NC_009050.1 433904 434818 R KEGG: nha:Nham_4463 hypothetical protein; hypothetical protein complement(433904..434818) Rhodobacter sphaeroides ATCC 17029 4899174 YP_001045250.1 CDS Rsph17029_3382 NC_009050.1 435511 436452 D KEGG: rru:Rru_A0512 hypothetical protein; hypothetical protein 435511..436452 Rhodobacter sphaeroides ATCC 17029 4899175 YP_001045251.1 CDS Rsph17029_3383 NC_009050.1 436452 439058 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rru:Rru_A0511 DEAD/DEAH box helicase; DEAD/DEAH box helicase 436452..439058 Rhodobacter sphaeroides ATCC 17029 4899176 YP_001045252.1 CDS Rsph17029_3384 NC_009050.1 439059 439796 D KEGG: neu:NE2513 putative (AF322013) ID483 [Bradyrhizobium japonicum]; hypothetical protein 439059..439796 Rhodobacter sphaeroides ATCC 17029 4898490 YP_001045253.1 CDS Rsph17029_3385 NC_009050.1 440034 440468 D PFAM: DNA mismatch endonuclease vsr; KEGG: nha:Nham_2517 DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr 440034..440468 Rhodobacter sphaeroides ATCC 17029 4898491 YP_001045254.1 CDS Rsph17029_3386 NC_009050.1 440422 441657 R KEGG: dvu:DVU2841 type II restriction endonuclease, putative; type II restriction endonuclease complement(440422..441657) Rhodobacter sphaeroides ATCC 17029 4898492 YP_001045255.1 CDS Rsph17029_3387 NC_009050.1 441667 442920 R KEGG: lpf:lpl0145 DNA (cytosine-5-)-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(441667..442920) Rhodobacter sphaeroides ATCC 17029 4898592 YP_001045256.1 CDS Rsph17029_3388 NC_009050.1 443458 444018 R KEGG: rsp:RSP_3646 DNA topology modulation kinase FlaR, putative; DNA topology modulation kinase FlaR complement(443458..444018) Rhodobacter sphaeroides ATCC 17029 4898246 YP_001045257.1 CDS Rsph17029_3389 NC_009050.1 445033 445926 R KEGG: rsp:RSP_3608 hypothetical protein; hypothetical protein complement(445033..445926) Rhodobacter sphaeroides ATCC 17029 4898738 YP_001045258.1 CDS Rsph17029_3393 NC_009050.1 447128 448033 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(447128..448033) Rhodobacter sphaeroides ATCC 17029 4898395 YP_001045259.1 CDS Rsph17029_3394 NC_009050.1 448152 449678 R PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3656 NAD-dependent aldehyde dehydrogenase; aldehyde dehydrogenase complement(448152..449678) Rhodobacter sphaeroides ATCC 17029 4898740 YP_001045260.1 CDS Rsph17029_3395 NC_009050.1 449720 450376 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3657 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase; dimethylmenaquinone methyltransferase complement(449720..450376) Rhodobacter sphaeroides ATCC 17029 4898321 YP_001045261.1 CDS Rsph17029_3396 NC_009050.1 450373 451173 R PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_3658 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase complement(450373..451173) Rhodobacter sphaeroides ATCC 17029 4898322 YP_001045262.1 CDS Rsph17029_3397 NC_009050.1 451170 452012 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rsp:RSP_3659 predicted amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(451170..452012) Rhodobacter sphaeroides ATCC 17029 4898323 YP_001045263.1 CDS Rsph17029_3398 NC_009050.1 452064 453059 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rsp:RSP_3661 TRAP-T family transporter, periplasmic binding protein; TRAP dicarboxylate transporter, DctP subunit complement(452064..453059) Rhodobacter sphaeroides ATCC 17029 4898289 YP_001045264.1 CDS Rsph17029_3399 NC_009050.1 453127 454407 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_3662 TRAP-T family transporter, large (12TMs) inner membrane subunit; TRAP dicarboxylate transporter, DctM subunit complement(453127..454407) Rhodobacter sphaeroides ATCC 17029 4898290 YP_001045265.1 CDS Rsph17029_3400 NC_009050.1 454404 454958 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rsp:RSP_3663 TRAP-T family transporter, small (4TMs) inner membrane subunit; tripartite ATP-independent periplasmic transporter DctQ complement(454404..454958) Rhodobacter sphaeroides ATCC 17029 4898291 YP_001045266.1 CDS Rsph17029_3401 NC_009050.1 455163 455864 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3664 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(455163..455864) Rhodobacter sphaeroides ATCC 17029 4898253 YP_001045267.1 CDS Rsph17029_3402 NC_009050.1 456803 457519 R PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rsp:RSP_3665 transcriptional regulator, LuxR family; response regulator receiver protein complement(456803..457519) Rhodobacter sphaeroides ATCC 17029 4898254 YP_001045268.1 CDS Rsph17029_3403 NC_009050.1 457776 468680 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rsp:RSP_3667 transcriptional regulator, AraC family with parallel beta-helix repeat; hypothetical protein 457776..468680 Rhodobacter sphaeroides ATCC 17029 4898255 YP_001045269.1 CDS Rsph17029_3404 NC_009050.1 468685 472212 D KEGG: rsp:RSP_3669 hypothetical protein; hypothetical protein 468685..472212 Rhodobacter sphaeroides ATCC 17029 4898816 YP_001045270.1 CDS Rsph17029_3405 NC_009050.1 472532 473530 R PFAM: oxidoreductase domain protein; KEGG: rsp:RSP_3670 putative oxidoreductase myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein complement(472532..473530) Rhodobacter sphaeroides ATCC 17029 4898817 YP_001045271.1 CDS Rsph17029_3406 NC_009050.1 473530 474417 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3671 putative D-tagatose 3-epimerase; xylose isomerase domain-containing protein complement(473530..474417) Rhodobacter sphaeroides ATCC 17029 4898818 YP_001045272.1 CDS Rsph17029_3407 NC_009050.1 474471 475304 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3672 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(474471..475304) Rhodobacter sphaeroides ATCC 17029 4898959 YP_001045273.1 CDS Rsph17029_3408 NC_009050.1 475304 476230 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(475304..476230) Rhodobacter sphaeroides ATCC 17029 4898960 YP_001045274.1 CDS Rsph17029_3409 NC_009050.1 476359 477573 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3674 ABC sugar transporter, periplasmic binding protein; extracellular solute-binding protein complement(476359..477573) Rhodobacter sphaeroides ATCC 17029 4898961 YP_001045275.1 CDS Rsph17029_3410 NC_009050.1 477621 478538 R PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rsp:RSP_3675 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein complement(477621..478538) Rhodobacter sphaeroides ATCC 17029 4898287 YP_001045276.1 CDS Rsph17029_3411 NC_009050.1 478535 479260 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3676 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(478535..479260) Rhodobacter sphaeroides ATCC 17029 4898288 YP_001045277.1 CDS Rsph17029_3412 NC_009050.1 479387 480466 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3677 ABC sugar transporter, ATPase subunit; ABC transporter 479387..480466 Rhodobacter sphaeroides ATCC 17029 4898472 YP_001045278.1 CDS Rsph17029_3413 NC_009050.1 481178 482215 D PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rsp:RSP_3678 siderophore-interacting protein; siderophore-interacting protein 481178..482215 Rhodobacter sphaeroides ATCC 17029 4898473 YP_001045279.1 CDS Rsph17029_3414 NC_009050.1 482529 483695 R KEGG: rsp:RSP_3679 hypothetical protein; hypothetical protein complement(482529..483695) Rhodobacter sphaeroides ATCC 17029 4898474 YP_001045280.1 CDS Rsph17029_3415 NC_009050.1 483934 484557 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3680 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(483934..484557) Rhodobacter sphaeroides ATCC 17029 4898845 YP_001045281.1 CDS Rsph17029_3416 NC_009050.1 484696 486732 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3681 putative NADH-dependent oxidase; NADH:flavin oxidoreductase 484696..486732 Rhodobacter sphaeroides ATCC 17029 4898846 YP_001045282.1 CDS Rsph17029_3417 NC_009050.1 487159 488145 D KEGG: rsp:RSP_3683 possible FemAB family protein; putative FemAB family protein 487159..488145 Rhodobacter sphaeroides ATCC 17029 4898847 YP_001045283.1 CDS Rsph17029_3418 NC_009050.1 488720 489400 D PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rsp:RSP_3684 transcriptional regulator, LuxR family; response regulator receiver protein 488720..489400 Rhodobacter sphaeroides ATCC 17029 4899102 YP_001045284.1 CDS Rsph17029_3419 NC_009050.1 489494 489940 D KEGG: rsp:RSP_6198 hypothetical protein; hypothetical protein 489494..489940 Rhodobacter sphaeroides ATCC 17029 4899103 YP_001045285.1 CDS Rsph17029_3420 NC_009050.1 490233 490604 D KEGG: rsp:RSP_6199 hypothetical protein; hypothetical protein 490233..490604 Rhodobacter sphaeroides ATCC 17029 4899104 YP_001045286.1 CDS Rsph17029_3421 NC_009050.1 490993 492033 D PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3686 transcriptional regulator, LacI family; periplasmic binding protein/LacI transcriptional regulator 490993..492033 Rhodobacter sphaeroides ATCC 17029 4898284 YP_001045287.1 CDS Rsph17029_3422 NC_009050.1 492036 492968 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3687 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 492036..492968 Rhodobacter sphaeroides ATCC 17029 4898285 YP_001045288.1 CDS Rsph17029_3423 NC_009050.1 492965 493750 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3688 ABC sugar transporter, ATPase subunit; ABC transporter 492965..493750 Rhodobacter sphaeroides ATCC 17029 4898286 YP_001045289.1 CDS Rsph17029_3424 NC_009050.1 493750 494754 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3689 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 493750..494754 Rhodobacter sphaeroides ATCC 17029 4898872 YP_001045290.1 CDS Rsph17029_3425 NC_009050.1 494751 495815 D PFAM: aryldialkylphosphatase; KEGG: rsp:RSP_3690 resiniferatoxin-binding, phosphotriesterase-related protein; aryldialkylphosphatase 494751..495815 Rhodobacter sphaeroides ATCC 17029 4898873 YP_001045291.1 CDS Rsph17029_3426 NC_009050.1 495838 496602 D PFAM: protein of unknown function DUF1355; KEGG: rsp:RSP_3691 putative cytoplasmic protein; hypothetical protein 495838..496602 Rhodobacter sphaeroides ATCC 17029 4898874 YP_001045292.1 CDS Rsph17029_3427 NC_009050.1 496732 497610 R PFAM: PfkB domain protein; KEGG: rsp:RSP_3692 carbohydrate kinase, PfkB/ribokinase; ribokinase-like domain-containing protein complement(496732..497610) Rhodobacter sphaeroides ATCC 17029 4898379 YP_001045293.1 CDS Rsph17029_3428 NC_009050.1 497643 498485 D PFAM: photosystem I assembly BtpA; KEGG: rsp:RSP_3693 BtpA protein; photosystem I assembly BtpA 497643..498485 Rhodobacter sphaeroides ATCC 17029 4898380 YP_001045294.1 CDS Rsph17029_3429 NC_009050.1 498478 499143 D PFAM: TENA/THI-4 domain protein; KEGG: rsp:RSP_3694 putative transcription activator; TenA family transcription regulator 498478..499143 Rhodobacter sphaeroides ATCC 17029 4898381 YP_001045295.1 CDS Rsph17029_3430 NC_009050.1 499113 500207 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rsp:RSP_3695 putative acetylornithine deacetylase (acetylornithinase); peptidase M20 complement(499113..500207) Rhodobacter sphaeroides ATCC 17029 4899081 YP_001045296.1 CDS Rsph17029_3431 NC_009050.1 500577 501692 D KEGG: rsp:RSP_3696 ABC sulfate/thiosulfate transporter, ATPase subunit CysA; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 500577..501692 Rhodobacter sphaeroides ATCC 17029 4899082 YP_001045297.1 CDS Rsph17029_3432 NC_009050.1 501689 502681 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3697 ABC sulfate/thiosulfate transporter, periplasmic binding protein CysP; sulfate ABC transporter, periplasmic sulfate-binding protein 501689..502681 Rhodobacter sphaeroides ATCC 17029 4898400 YP_001045298.1 CDS Rsph17029_3433 NC_009050.1 502678 503535 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3698 ABC sulfate/thiosulfate transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit CysT 502678..503535 Rhodobacter sphaeroides ATCC 17029 4898401 YP_001045299.1 CDS Rsph17029_3434 NC_009050.1 503532 504371 D TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3699 ABC sulfate/thiosulfate transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit CysW 503532..504371 Rhodobacter sphaeroides ATCC 17029 4898402 YP_001045300.1 CDS Rsph17029_3435 NC_009050.1 504461 505525 R PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3700 transcriptional regulator, LacI family; regulatory protein, LacI complement(504461..505525) Rhodobacter sphaeroides ATCC 17029 4898529 YP_001045301.1 CDS Rsph17029_3436 NC_009050.1 505695 506744 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3701 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 505695..506744 Rhodobacter sphaeroides ATCC 17029 4898530 YP_001045302.1 CDS Rsph17029_3437 NC_009050.1 506803 507600 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3702 ABC sugar transporter, ATPase subunit; ABC transporter 506803..507600 Rhodobacter sphaeroides ATCC 17029 4898531 YP_001045303.1 CDS Rsph17029_3438 NC_009050.1 507603 508841 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3703 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 507603..508841 Rhodobacter sphaeroides ATCC 17029 4898695 YP_001045304.1 CDS Rsph17029_3439 NC_009050.1 508854 509582 D PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_3704 ribitol 2-dehydrogenase; short-chain dehydrogenase/reductase SDR 508854..509582 Rhodobacter sphaeroides ATCC 17029 4898696 YP_001045305.1 CDS Rsph17029_3440 NC_009050.1 509656 511290 D TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rsp:RSP_3705 D-ribulokinase; FGGY-family pentulose kinase 509656..511290 Rhodobacter sphaeroides ATCC 17029 4898697 YP_001045306.1 CDS Rsph17029_3441 NC_009050.1 511390 511917 R KEGG: rsp:RSP_3706 hypothetical protein; hypothetical protein complement(511390..511917) Rhodobacter sphaeroides ATCC 17029 4898127 YP_001045307.1 CDS Rsph17029_3442 NC_009050.1 512224 513915 D PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3707 putative NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 512224..513915 Rhodobacter sphaeroides ATCC 17029 4898128 YP_001045308.1 CDS Rsph17029_3443 NC_009050.1 513950 515611 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3708 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(513950..515611) Rhodobacter sphaeroides ATCC 17029 4898129 YP_001045309.1 CDS Rsph17029_3444 NC_009050.1 515873 516319 R subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G complement(515873..516319) Rhodobacter sphaeroides ATCC 17029 4898921 YP_001045310.1 CDS Rsph17029_3445 NC_009050.1 516316 516597 R subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F complement(516316..516597) Rhodobacter sphaeroides ATCC 17029 4898922 YP_001045311.1 CDS Rsph17029_3446 NC_009050.1 516594 517082 R subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E complement(516594..517082) Rhodobacter sphaeroides ATCC 17029 4898923 YP_001045312.1 CDS Rsph17029_3447 NC_009050.1 517079 518701 R subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D complement(517079..518701) Rhodobacter sphaeroides ATCC 17029 4898478 YP_001045313.1 CDS Rsph17029_3448 NC_009050.1 518698 519042 R subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C complement(518698..519042) Rhodobacter sphaeroides ATCC 17029 4898479 YP_001045314.1 CDS Rsph17029_3449 NC_009050.1 519042 521936 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A complement(519042..521936) Rhodobacter sphaeroides ATCC 17029 4898480 YP_001045315.1 CDS Rsph17029_3450 NC_009050.1 522256 523311 D catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 522256..523311 Rhodobacter sphaeroides ATCC 17029 4898834 YP_001045316.1 CDS Rsph17029_3451 NC_009050.1 523383 523820 R KEGG: rsp:RSP_3717 hypothetical protein; hypothetical protein complement(523383..523820) Rhodobacter sphaeroides ATCC 17029 4898835 YP_001045317.1 CDS Rsph17029_3452 NC_009050.1 523832 525274 R KEGG: rsp:RSP_3718 hypothetical protein; hypothetical protein complement(523832..525274) Rhodobacter sphaeroides ATCC 17029 4898292 YP_001045318.1 CDS Rsph17029_3453 NC_009050.1 525608 527122 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rsp:RSP_3719 polysaccharide export transporter, PST family; polysaccharide biosynthesis protein 525608..527122 Rhodobacter sphaeroides ATCC 17029 4898293 YP_001045319.1 CDS Rsph17029_3454 NC_009050.1 527134 528087 D KEGG: rsp:RSP_3720 hypothetical protein; hypothetical protein 527134..528087 Rhodobacter sphaeroides ATCC 17029 4898294 YP_001045320.1 CDS Rsph17029_3455 NC_009050.1 528524 529675 D PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_3721 hypothetical protein; group 1 glycosyl transferase 528524..529675 Rhodobacter sphaeroides ATCC 17029 4898318 YP_001045321.1 CDS Rsph17029_3456 NC_009050.1 529842 530792 R PFAM: phosphoribosyltransferase; KEGG: rsp:RSP_3722 hypothetical protein; phosphoribosyltransferase complement(529842..530792) Rhodobacter sphaeroides ATCC 17029 4898319 YP_001045322.1 CDS Rsph17029_3457 NC_009050.1 530889 532043 R PFAM: acyltransferase 3; KEGG: rsp:RSP_3723 hypothetical protein; acyltransferase 3 complement(530889..532043) Rhodobacter sphaeroides ATCC 17029 4898320 YP_001045323.1 CDS Rsph17029_3458 NC_009050.1 532220 533296 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_3724 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase complement(532220..533296) Rhodobacter sphaeroides ATCC 17029 4898423 YP_001045324.1 CDS Rsph17029_3459 NC_009050.1 533576 535282 R KEGG: rsp:RSP_3725 hypothetical protein; hypothetical protein complement(533576..535282) Rhodobacter sphaeroides ATCC 17029 4898424 YP_001045325.1 CDS Rsph17029_3460 NC_009050.1 535279 537258 R KEGG: rsp:RSP_3727 hypothetical protein; hypothetical protein complement(535279..537258) Rhodobacter sphaeroides ATCC 17029 4898425 YP_001045326.1 CDS Rsph17029_3461 NC_009050.1 537626 538216 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rsp:RSP_3728 putative acyl carrier protein phosphodiesterase; ACP phosphodiesterase complement(537626..538216) Rhodobacter sphaeroides ATCC 17029 4898713 YP_001045327.1 CDS Rsph17029_3462 NC_009050.1 538692 539084 D KEGG: rsp:RSP_3729 hypothetical protein; hypothetical protein 538692..539084 Rhodobacter sphaeroides ATCC 17029 4898714 YP_001045328.1 CDS Rsph17029_3463 NC_009050.1 539277 540158 D YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 539277..540158 Rhodobacter sphaeroides ATCC 17029 4898715 YP_001045329.1 CDS Rsph17029_3464 NC_009050.1 540200 540964 R PFAM: regulatory protein, DeoR; KEGG: rsp:RSP_3731 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(540200..540964) Rhodobacter sphaeroides ATCC 17029 4898118 YP_001045330.1 CDS Rsph17029_3465 NC_009050.1 541083 542129 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3732 ABC sugar transporter, periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 541083..542129 Rhodobacter sphaeroides ATCC 17029 4898119 YP_001045331.1 CDS Rsph17029_3466 NC_009050.1 542211 543704 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3733 ABC sugar transporter, fused ATPase domains; ABC transporter 542211..543704 Rhodobacter sphaeroides ATCC 17029 4898120 YP_001045332.1 CDS Rsph17029_3467 NC_009050.1 543713 544690 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3734 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 543713..544690 Rhodobacter sphaeroides ATCC 17029 4898097 YP_001045333.1 CDS Rsph17029_3468 NC_009050.1 544703 545713 D PFAM: inner-membrane translocator; KEGG: rsp:RSP_3735 ABC sugar transporter, inner membrane subunit; inner-membrane translocator 544703..545713 Rhodobacter sphaeroides ATCC 17029 4898098 YP_001045334.1 CDS Rsph17029_3469 NC_009050.1 545710 546804 D KEGG: rsp:RSP_3736 hypothetical protein; hypothetical protein 545710..546804 Rhodobacter sphaeroides ATCC 17029 4898099 YP_001045335.1 CDS Rsph17029_3470 NC_009050.1 546808 547755 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rsp:RSP_3738 carbohydrate kinase, PfkB family; ribokinase 546808..547755 Rhodobacter sphaeroides ATCC 17029 4898345 YP_001045336.1 CDS Rsph17029_3471 NC_009050.1 547752 548726 D KEGG: rsp:RSP_3739 deoxyribose phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase 547752..548726 Rhodobacter sphaeroides ATCC 17029 4898346 YP_001045337.1 CDS Rsph17029_3472 NC_009050.1 548738 551113 D PFAM: aldehyde dehydrogenase; KEGG: rsp:RSP_3740 aldehyde dehydrogenase; betaine-aldehyde dehydrogenase 548738..551113 Rhodobacter sphaeroides ATCC 17029 4898854 YP_001045338.1 CDS Rsph17029_3473 NC_009050.1 551290 552081 R PFAM: extracellular solute-binding protein, family 3; KEGG: rsp:RSP_3742 ABC amino acid transporter, periplasmic binding protein; extracellular solute-binding protein complement(551290..552081) Rhodobacter sphaeroides ATCC 17029 4898855 YP_001045339.1 CDS Rsph17029_3474 NC_009050.1 552109 553071 R TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rsp:RSP_3743 putative agmatinase; putative agmatinase complement(552109..553071) Rhodobacter sphaeroides ATCC 17029 4898856 YP_001045340.1 CDS Rsph17029_3475 NC_009050.1 553075 553734 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3744 ABC amino acid transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(553075..553734) Rhodobacter sphaeroides ATCC 17029 4898776 YP_001045341.1 CDS Rsph17029_3476 NC_009050.1 553731 554531 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3745 ABC amino acid transporter, ATPase subunit; ABC transporter complement(553731..554531) Rhodobacter sphaeroides ATCC 17029 4898777 YP_001045342.1 CDS Rsph17029_3477 NC_009050.1 554528 555142 R KEGG: rsp:RSP_3746 hypothetical protein; hypothetical protein complement(554528..555142) Rhodobacter sphaeroides ATCC 17029 4898778 YP_001045343.1 CDS Rsph17029_3478 NC_009050.1 555439 556617 D PFAM: peptidase M24; KEGG: rsp:RSP_3747 putative dipeptidase; peptidase M24 555439..556617 Rhodobacter sphaeroides ATCC 17029 4898690 YP_001045344.1 CDS Rsph17029_3479 NC_009050.1 557290 558084 R PFAM: protein of unknown function DUF849; KEGG: rsp:RSP_3804 hypothetical protein; hypothetical protein complement(557290..558084) Rhodobacter sphaeroides ATCC 17029 4898396 YP_001045345.1 CDS Rsph17029_3480 NC_009050.1 558125 559453 R PFAM: aminotransferase class-III; KEGG: rsp:RSP_3803 hypothetical protein; hypothetical protein complement(558125..559453) Rhodobacter sphaeroides ATCC 17029 4898692 YP_001045346.1 CDS Rsph17029_3481 NC_009050.1 559458 559883 R PFAM: UspA domain protein; KEGG: rsp:RSP_3802 hypothetical protein; UspA domain-containing protein complement(559458..559883) Rhodobacter sphaeroides ATCC 17029 4898520 YP_001045347.1 CDS Rsph17029_3482 NC_009050.1 559846 562458 R TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsp:RSP_1412 TRAP-T family transporter with fused DctQ/DctM subunits; TRAP transporter, 4TM/12TM fusion protein complement(559846..562458) Rhodobacter sphaeroides ATCC 17029 4898521 YP_001045348.1 CDS Rsph17029_3483 NC_009050.1 562537 563511 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_1413 TRAP-T family transporter, periplasmic binding component; TRAP transporter solute receptor TAXI family protein complement(562537..563511) Rhodobacter sphaeroides ATCC 17029 4898522 YP_001045349.1 CDS Rsph17029_3484 NC_009050.1 563659 564519 D PFAM: sugar isomerase (SIS); KEGG: rsp:RSP_1414 hypothetical protein; RpiR family transcriptional regulator 563659..564519 Rhodobacter sphaeroides ATCC 17029 4898220 YP_001045350.1 CDS Rsph17029_3485 NC_009050.1 564844 565746 D PFAM: polysaccharide deacetylase; KEGG: rsp:RSP_1415 putative polysaccharide deacetylase; polysaccharide deacetylase 564844..565746 Rhodobacter sphaeroides ATCC 17029 4898221 YP_001045351.1 CDS Rsph17029_3486 NC_009050.1 565768 566061 D KEGG: rsp:RSP_1416 hypothetical protein; hypothetical protein 565768..566061 Rhodobacter sphaeroides ATCC 17029 4898222 YP_001045352.1 CDS Rsph17029_3487 NC_009050.1 566054 567001 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rsp:RSP_1417 hypothetical protein; cobalamin synthesis protein, P47K 566054..567001 Rhodobacter sphaeroides ATCC 17029 4899049 YP_001045353.1 CDS Rsph17029_3488 NC_009050.1 567209 568726 R PFAM: protein of unknown function DUF112, transmembrane; KEGG: rsp:RSP_1418 TRAP-T family transporter, large (12 TMs) inner membrane subunit; hypothetical protein complement(567209..568726) Rhodobacter sphaeroides ATCC 17029 4899050 YP_001045354.1 CDS Rsph17029_3489 NC_009050.1 568727 569218 R KEGG: rsp:RSP_1419 TRAP-T family transporter, small (4 TMs) inner membrane subunit; TRAP-T family transporter small inner membrane subunit complement(568727..569218) Rhodobacter sphaeroides ATCC 17029 4899051 YP_001045355.1 CDS Rsph17029_3490 NC_009050.1 569215 570159 R PFAM: Uncharacterized protein UPF0065; KEGG: rsp:RSP_1420 TRAP-T family transporter, periplasmic binding protein; hypothetical protein complement(569215..570159) Rhodobacter sphaeroides ATCC 17029 4898693 YP_001045356.1 CDS Rsph17029_3491 NC_009050.1 570398 570595 R KEGG: rsp:RSP_1421 hypothetical protein; hypothetical protein complement(570398..570595) Rhodobacter sphaeroides ATCC 17029 4898694 YP_001045357.1 CDS Rsph17029_3492 NC_009050.1 571021 572106 R PFAM: ParB domain protein nuclease; KEGG: rsp:RSP_1422 ParB-like nuclease; nuclease complement(571021..572106) Rhodobacter sphaeroides ATCC 17029 4898169 YP_001045358.1 CDS Rsph17029_3493 NC_009050.1 572084 573490 R PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rsp:RSP_1423 ParA family ATPase; cobyrinic acid a,c-diamide synthase complement(572084..573490) Rhodobacter sphaeroides ATCC 17029 4898170 YP_001045359.1 CDS Rsph17029_3494 NC_009050.1 574086 575399 D KEGG: rsp:RSP_1425 plasmid replication initiation protein; plasmid replication initiation protein 574086..575399 Rhodobacter sphaeroides ATCC 17029 4898171 YP_001045360.1 CDS Rsph17029_3495 NC_009050.1 581669 582757 R KEGG: rsp:RSP_3806 hypothetical protein; hypothetical protein complement(581669..582757) Rhodobacter sphaeroides ATCC 17029 4899092 YP_001045361.1 CDS Rsph17029_3496 NC_009050.1 582934 583941 R KEGG: rsp:RSP_3808 hypothetical protein; hypothetical protein complement(582934..583941) Rhodobacter sphaeroides ATCC 17029 4898626 YP_001045362.1 CDS Rsph17029_3497 NC_009050.1 584216 584524 R PFAM: plasmid stabilization system; KEGG: rsp:RSP_3809 hypothetical protein; plasmid stabilization system protein complement(584216..584524) Rhodobacter sphaeroides ATCC 17029 4898627 YP_001045363.1 CDS Rsph17029_3498 NC_009050.1 584529 584783 R KEGG: rsp:RSP_3810 hypothetical protein; hypothetical protein complement(584529..584783) Rhodobacter sphaeroides ATCC 17029 4898350 YP_001045364.1 CDS Rsph17029_3499 NC_009050.1 584866 585189 R KEGG: rsp:RSP_3811 hypothetical protein; hypothetical protein complement(584866..585189) Rhodobacter sphaeroides ATCC 17029 4898351 YP_001045365.1 CDS Rsph17029_3500 NC_009050.1 585260 585439 D hypothetical protein 585260..585439 Rhodobacter sphaeroides ATCC 17029 4898352 YP_001045366.1 CDS Rsph17029_3501 NC_009050.1 585510 587081 D PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: rsp:RSP_3812 recombinase; recombinase 585510..587081 Rhodobacter sphaeroides ATCC 17029 4898124 YP_001045367.1 CDS Rsph17029_3502 NC_009050.1 587081 587989 D PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rsp:RSP_3813 ParB-like nuclease; RepB plasmid partition 587081..587989 Rhodobacter sphaeroides ATCC 17029 4898125 YP_001045368.1 CDS Rsph17029_3503 NC_009050.1 587986 588903 D PFAM: RepB plasmid partition; SMART: ParB domain protein nuclease; KEGG: rsp:RSP_3814 hypothetical protein; RepB plasmid partition 587986..588903 Rhodobacter sphaeroides ATCC 17029 4898126 YP_001045369.1 CDS Rsph17029_3504 NC_009050.1 590256 590540 R KEGG: sil:SPOA0122 ISSpo9, transposase; hypothetical protein complement(590256..590540) Rhodobacter sphaeroides ATCC 17029 4899168 YP_001045370.1 CDS Rsph17029_3506 NC_009050.1 590707 590979 D hypothetical protein 590707..590979 Rhodobacter sphaeroides ATCC 17029 4898811 YP_001045371.1 CDS Rsph17029_3507 NC_009050.1 590979 591326 D hypothetical protein 590979..591326 Rhodobacter sphaeroides ATCC 17029 4899170 YP_001045372.1 CDS Rsph17029_3508 NC_009050.1 591525 591812 D hypothetical protein 591525..591812 Rhodobacter sphaeroides ATCC 17029 4899066 YP_001045373.1 CDS Rsph17029_3509 NC_009050.1 591994 592566 R KEGG: rsp:RSP_3313 possible phage integrase family protein; putative phage integrase family protein complement(591994..592566) Rhodobacter sphaeroides ATCC 17029 4899067 YP_001045374.1 CDS Rsph17029_3510 NC_009050.1 593120 594016 D KEGG: rsp:RSP_6232 hypothetical protein; hypothetical protein 593120..594016 Rhodobacter sphaeroides ATCC 17029 4898812 YP_001045375.1 CDS rplU NC_009050.1 594304 594699 D PFAM: ribosomal protein L21; KEGG: rsp:RSP_3819 ribosomal protein L21; 50S ribosomal protein L21 594304..594699 Rhodobacter sphaeroides ATCC 17029 4898722 YP_001045376.1 CDS rpmA NC_009050.1 594706 594975 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 594706..594975 Rhodobacter sphaeroides ATCC 17029 4898723 YP_001045377.1 CDS Rsph17029_3513 NC_009050.1 595138 595677 D PFAM: GCN5-related N-acetyltransferase; KEGG: rsp:RSP_3821 putative acetyltransferase; N-acetyltransferase GCN5 595138..595677 Rhodobacter sphaeroides ATCC 17029 4899111 YP_001045378.1 CDS obgE NC_009050.1 595772 596800 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 595772..596800 Rhodobacter sphaeroides ATCC 17029 4899112 YP_001045379.1 CDS Rsph17029_3515 NC_009050.1 596788 597912 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 596788..597912 Rhodobacter sphaeroides ATCC 17029 4899113 YP_001045380.1 CDS proA NC_009050.1 597963 599225 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 597963..599225 Rhodobacter sphaeroides ATCC 17029 4899177 YP_001045381.1 CDS Rsph17029_3517 NC_009050.1 599229 599825 R KEGG: rsp:RSP_3825 hypothetical protein; hypothetical protein complement(599229..599825) Rhodobacter sphaeroides ATCC 17029 4899178 YP_001045382.1 CDS Rsph17029_3518 NC_009050.1 599859 600038 D KEGG: rsp:RSP_6239 hypothetical protein; hypothetical protein 599859..600038 Rhodobacter sphaeroides ATCC 17029 4899179 YP_001045383.1 CDS Rsph17029_3519 NC_009050.1 600206 600991 D KEGG: rsp:RSP_3826 hypothetical protein; hypothetical protein 600206..600991 Rhodobacter sphaeroides ATCC 17029 4898315 YP_001045384.1 CDS Rsph17029_3520 NC_009050.1 600988 601812 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rsp:RSP_3827 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 600988..601812 Rhodobacter sphaeroides ATCC 17029 4898316 YP_001045385.1 CDS Rsph17029_3521 NC_009050.1 601832 602512 R PFAM: thiamine monophosphate synthase; KEGG: rsp:RSP_3828 putative thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase complement(601832..602512) Rhodobacter sphaeroides ATCC 17029 4898317 YP_001045386.1 CDS Rsph17029_3522 NC_009050.1 602566 603297 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rsp:RSP_3829 tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 602566..603297 Rhodobacter sphaeroides ATCC 17029 4898193 YP_001045387.1 CDS Rsph17029_3523 NC_009050.1 603379 603693 D PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rsp:RSP_3830 hypothetical protein; ethyl tert-butyl ether degradation EthD 603379..603693 Rhodobacter sphaeroides ATCC 17029 4898194 YP_001045388.1 CDS Rsph17029_3524 NC_009050.1 603778 604953 D PFAM: cytochrome oxidase assembly; KEGG: rsp:RSP_3831 putative cytochrome oxidase assembly factor; cytochrome oxidase assembly 603778..604953 Rhodobacter sphaeroides ATCC 17029 4898195 YP_001045389.1 CDS Rsph17029_3525 NC_009050.1 604950 606431 D PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: rsp:RSP_3832 putative thermostable carboxypeptidase 1; carboxypeptidase Taq 604950..606431 Rhodobacter sphaeroides ATCC 17029 4898831 YP_001045390.1 CDS Rsph17029_3526 NC_009050.1 606439 606693 D hypothetical protein 606439..606693 Rhodobacter sphaeroides ATCC 17029 4898832 YP_001045391.1 CDS Rsph17029_3527 NC_009050.1 606833 606982 D hypothetical protein 606833..606982 Rhodobacter sphaeroides ATCC 17029 4898833 YP_001045392.1 CDS Rsph17029_3528 NC_009050.1 607303 608088 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(607303..608088) Rhodobacter sphaeroides ATCC 17029 4898466 YP_001045393.1 CDS Rsph17029_3529 NC_009050.1 608145 608570 D TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_3834 hypothetical protein; hypothetical protein 608145..608570 Rhodobacter sphaeroides ATCC 17029 4898467 YP_001045394.1 CDS Rsph17029_3530 NC_009050.1 608577 608936 R PFAM: protein of unknown function DUF583; KEGG: rsp:RSP_3835 hypothetical protein; hypothetical protein complement(608577..608936) Rhodobacter sphaeroides ATCC 17029 4898468 YP_001045395.1 CDS Rsph17029_3531 NC_009050.1 609091 609387 D KEGG: rsp:RSP_6211 hypothetical protein; hypothetical protein 609091..609387 Rhodobacter sphaeroides ATCC 17029 4899058 YP_001045396.1 CDS Rsph17029_3532 NC_009050.1 609384 611036 D PFAM: Amidohydrolase 3; KEGG: rsp:RSP_3836 putative metal-dependent hydrolase; amidohydrolase 3 609384..611036 Rhodobacter sphaeroides ATCC 17029 4899059 YP_001045397.1 CDS Rsph17029_3533 NC_009050.1 617103 617420 D KEGG: sil:SPOA0091 IS3 family transposase orfA; IS3 family transposase orfA 617103..617420 Rhodobacter sphaeroides ATCC 17029 4899009 YP_001045398.1 CDS Rsph17029_3535 NC_009050.1 618678 619532 R KEGG: sit:TM1040_3780 conserved hypothetical protein; hypothetical protein complement(618678..619532) Rhodobacter sphaeroides ATCC 17029 4899010 YP_001045399.1 CDS Rsph17029_3536 NC_009050.1 619640 620254 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sit:TM1040_3784 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 619640..620254 Rhodobacter sphaeroides ATCC 17029 4899054 YP_001045400.1 CDS Rsph17029_3537 NC_009050.1 620251 620955 D KEGG: sit:TM1040_3783 conserved hypothetical protein; hypothetical protein 620251..620955 Rhodobacter sphaeroides ATCC 17029 4898808 YP_001045401.1 CDS Rsph17029_3538 NC_009050.1 621639 621995 D KEGG: mlo:mll1500 glucose dehydrogenase; glucose dehydrogenase-like protein 621639..621995 Rhodobacter sphaeroides ATCC 17029 4898809 YP_001045402.1 CDS Rsph17029_3539 NC_009050.1 622008 624182 D PFAM: Pyrrolo-quinoline quinone; KEGG: xcb:XC_2659 glucose dehydrogenase; quinoprotein glucose dehydrogenase 622008..624182 Rhodobacter sphaeroides ATCC 17029 4898810 YP_001045403.1 CDS Rsph17029_3540 NC_009050.1 624712 627891 D PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rru:Rru_A1726 transcription-repair coupling factor; DEAD/DEAH box helicase 624712..627891 Rhodobacter sphaeroides ATCC 17029 4899099 YP_001045404.1 CDS Rsph17029_3541 NC_009050.1 627975 628964 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rde:RD1_0833 periplasmic substrate-binding transport protein, putative; TRAP dicarboxylate transporter, DctP subunit complement(627975..628964) Rhodobacter sphaeroides ATCC 17029 4899100 YP_001045405.1 CDS Rsph17029_3542 NC_009050.1 628996 630288 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vvy:VVA1579 TRAP-type C4-dicarboxylate transport system, large permease component; TRAP dicarboxylate transporter, DctM subunit complement(628996..630288) Rhodobacter sphaeroides ATCC 17029 4899101 YP_001045406.1 CDS Rsph17029_3543 NC_009050.1 630296 630793 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rde:RD1_0832 C4-dicarboxylate transport system, small permease protein, putative; tripartite ATP-independent periplasmic transporter DctQ complement(630296..630793) Rhodobacter sphaeroides ATCC 17029 4898781 YP_001045407.1 CDS Rsph17029_3544 NC_009050.1 630787 632187 R PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: mlo:mlr1886 D-mannonate oxidoreductase; mannitol dehydrogenase domain-containing protein complement(630787..632187) Rhodobacter sphaeroides ATCC 17029 4898782 YP_001045408.1 CDS Rsph17029_3545 NC_009050.1 632192 633229 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rde:RD1_1048 L-idonate 5-dehydrogenase, putative; alcohol dehydrogenase complement(632192..633229) Rhodobacter sphaeroides ATCC 17029 4898783 YP_001045409.1 CDS Rsph17029_3546 NC_009050.1 633405 634247 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: rle:RL1496 putative sugar isomerase family protein; RpiR family transcriptional regulator 633405..634247 Rhodobacter sphaeroides ATCC 17029 4898301 YP_001045410.1 CDS Rsph17029_3547 NC_009050.1 634348 636288 D PFAM: PfkB domain protein; KEGG: pde:Pden_1676 PfkB domain protein; ribokinase-like domain-containing protein 634348..636288 Rhodobacter sphaeroides ATCC 17029 4898302 YP_001045411.1 CDS Rsph17029_3548 NC_009050.1 636759 637409 D PFAM: regulatory protein, TetR; KEGG: tfu:Tfu_2799 TetR/AcrR family transcriptional regulator; TetR family transcriptional regulator 636759..637409 Rhodobacter sphaeroides ATCC 17029 4898303 YP_001045412.1 CDS Rsph17029_3549 NC_009050.1 637474 638196 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rxy:Rxyl_0346 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 637474..638196 Rhodobacter sphaeroides ATCC 17029 4898420 YP_001045413.1 CDS Rsph17029_3550 NC_009050.1 638186 639748 D PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa55900 acyl-CoA synthase; AMP-dependent synthetase and ligase 638186..639748 Rhodobacter sphaeroides ATCC 17029 4898421 YP_001045414.1 CDS Rsph17029_3551 NC_009050.1 639798 640967 D PFAM: Extracellular ligand-binding receptor; KEGG: fnu:FN1432 leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein; extracellular ligand-binding receptor 639798..640967 Rhodobacter sphaeroides ATCC 17029 4898422 YP_001045415.1 CDS Rsph17029_3552 NC_009050.1 640991 641860 D PFAM: inner-membrane translocator; KEGG: dge:Dgeo_2166 inner-membrane translocator; inner-membrane translocator 640991..641860 Rhodobacter sphaeroides ATCC 17029 4899079 YP_001045416.1 CDS Rsph17029_3553 NC_009050.1 641860 642855 D PFAM: inner-membrane translocator; KEGG: gsu:GSU1732 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 641860..642855 Rhodobacter sphaeroides ATCC 17029 4899080 YP_001045417.1 CDS Rsph17029_3554 NC_009050.1 642852 643562 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU3392 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter 642852..643562 Rhodobacter sphaeroides ATCC 17029 4898429 YP_001045418.1 CDS Rsph17029_3555 NC_009050.1 643555 644253 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1294 ABC-type branched-chain amino acid transport systems ATPase component; ABC transporter 643555..644253 Rhodobacter sphaeroides ATCC 17029 4898430 YP_001045419.1 CDS Rsph17029_3556 NC_009050.1 644266 645039 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reh:H16_B0420 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 644266..645039 Rhodobacter sphaeroides ATCC 17029 4898431 YP_001045420.1 CDS Rsph17029_3557 NC_009050.1 645039 645752 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL0183 putative enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase/isomerase 645039..645752 Rhodobacter sphaeroides ATCC 17029 4898932 YP_001045421.1 CDS Rsph17029_3558 NC_009050.1 645995 646381 D hypothetical protein 645995..646381 Rhodobacter sphaeroides ATCC 17029 4898933 YP_001045422.1 CDS Rsph17029_3559 NC_009050.1 646486 648609 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpb:RPB_2554 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 646486..648609 Rhodobacter sphaeroides ATCC 17029 4898934 YP_001045423.1 CDS Rsph17029_3560 NC_009050.1 648959 650356 D PFAM: PepSY-associated TM helix domain protein; KEGG: sit:TM1040_0303 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 648959..650356 Rhodobacter sphaeroides ATCC 17029 4898741 YP_001045424.1 CDS Rsph17029_3561 NC_009050.1 650748 651383 R KEGG: pde:Pden_0116 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(650748..651383) Rhodobacter sphaeroides ATCC 17029 4898742 YP_001045425.1 CDS Rsph17029_3562 NC_009050.1 652052 652429 D KEGG: rru:Rru_A3547 hypothetical protein; hypothetical protein 652052..652429 Rhodobacter sphaeroides ATCC 17029 4898743 YP_001045426.1 CDS Rsph17029_3563 NC_009050.1 652686 654140 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(652686..654140) Rhodobacter sphaeroides ATCC 17029 4899193 YP_001045427.1 CDS Rsph17029_3564 NC_009050.1 654187 655749 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(654187..655749) Rhodobacter sphaeroides ATCC 17029 4899194 YP_001045428.1 CDS Rsph17029_3565 NC_009050.1 656041 656718 R KEGG: rsp:RSP_3186 hypothetical protein; hypothetical protein complement(656041..656718) Rhodobacter sphaeroides ATCC 17029 4899195 YP_001045429.1 CDS Rsph17029_3566 NC_009050.1 657090 658289 D PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpc:RPC_3502 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 657090..658289 Rhodobacter sphaeroides ATCC 17029 4898121 YP_001045430.1 CDS Rsph17029_3567 NC_009050.1 658286 658528 D KEGG: jan:Jann_2252 hypothetical protein; hypothetical protein 658286..658528 Rhodobacter sphaeroides ATCC 17029 4898122 YP_001045431.1 CDS Rsph17029_3568 NC_009050.1 658816 659739 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator complement(658816..659739) Rhodobacter sphaeroides ATCC 17029 4898123 YP_001045432.1 CDS Rsph17029_3569 NC_009050.1 659831 660643 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sme:SMc03185 putative NADPH dehydrogenase quinone reductase transmembrane protein; NAD(P)H dehydrogenase (quinone) 659831..660643 Rhodobacter sphaeroides ATCC 17029 4898376 YP_001045433.1 CDS Rsph17029_3570 NC_009050.1 660974 661633 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sma:SAV7278 GntR-family transcriptional regulator; regulatory protein GntR 660974..661633 Rhodobacter sphaeroides ATCC 17029 4898377 YP_001045434.1 CDS Rsph17029_3571 NC_009050.1 661683 662663 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb21438 putative C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide; TRAP dicarboxylate transporter, DctP subunit 661683..662663 Rhodobacter sphaeroides ATCC 17029 4898378 YP_001045435.1 CDS Rsph17029_3572 NC_009050.1 662670 663161 D KEGG: bcl:ABC4078 C4-dicarboxylate transport system permease small protein; hypothetical protein 662670..663161 Rhodobacter sphaeroides ATCC 17029 4898362 YP_001045436.1 CDS Rsph17029_3573 NC_009050.1 663161 664459 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: csa:Csal_3212 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter, DctM subunit 663161..664459 Rhodobacter sphaeroides ATCC 17029 4898363 YP_001045437.1 CDS Rsph17029_3574 NC_009050.1 664475 665638 D PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bxe:Bxe_B0994 putative mandelate racemase / muconatelactonizing enzyme; mandelate racemase/muconate lactonizing protein 664475..665638 Rhodobacter sphaeroides ATCC 17029 4898295 YP_001045438.1 CDS Rsph17029_3575 NC_009050.1 665809 666381 D PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_0244 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 665809..666381 Rhodobacter sphaeroides ATCC 17029 4898296 YP_001045439.1 CDS Rsph17029_3576 NC_009050.1 666439 667356 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppu:PP_2054 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(666439..667356) Rhodobacter sphaeroides ATCC 17029 4898297 YP_001045440.1 CDS Rsph17029_3577 NC_009050.1 667469 668548 D PFAM: protein of unknown function DUF453; KEGG: pfl:PFL_2497 protein of unknown function (DUF453) superfamily; hypothetical protein 667469..668548 Rhodobacter sphaeroides ATCC 17029 4898387 YP_001045441.1 CDS Rsph17029_3578 NC_009050.1 668586 669671 D PFAM: Uncharacterized protein UPF0065; KEGG: csa:Csal_0164 uncharacterized protein UPF0065; hypothetical protein 668586..669671 Rhodobacter sphaeroides ATCC 17029 4898388 YP_001045442.1 CDS Rsph17029_3579 NC_009050.1 669724 671670 D PFAM: protein of unknown function DUF112, transmembrane; KEGG: csa:Csal_0165 protein of unknown function DUF112, transmembrane; hypothetical protein 669724..671670 Rhodobacter sphaeroides ATCC 17029 4898389 YP_001045443.1 CDS Rsph17029_3580 NC_009050.1 671733 672329 R PFAM: Glutathione S-transferase, N-terminal domain; KEGG: bur:Bcep18194_C7686 glutathione S-transferase-like; glutathione S-transferase domain-containing protein complement(671733..672329) Rhodobacter sphaeroides ATCC 17029 4898298 YP_001045444.1 CDS Rsph17029_3581 NC_009050.1 672334 673695 R PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein complement(672334..673695) Rhodobacter sphaeroides ATCC 17029 4898299 YP_001045445.1 CDS Rsph17029_3582 NC_009050.1 673710 675065 R PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein complement(673710..675065) Rhodobacter sphaeroides ATCC 17029 4898300 YP_001045446.1 CDS Rsph17029_3583 NC_009050.1 675071 676459 R PFAM: MmgE/PrpD family protein; KEGG: bxe:Bxe_B0284 putative MmgE/PRP family protein; MmgE/PrpD family protein complement(675071..676459) Rhodobacter sphaeroides ATCC 17029 4898250 YP_001045447.1 CDS Rsph17029_3584 NC_009050.1 676515 677282 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_1750 ABC glutamate/glutamine/aspartate/asparagine transporter, ATPase subunit BztD; ABC transporter complement(676515..677282) Rhodobacter sphaeroides ATCC 17029 4898251 YP_001045448.1 CDS Rsph17029_3585 NC_009050.1 677305 678417 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2913 probable ABC transporter permease protein; polar amino acid ABC transporter, inner membrane subunit complement(677305..678417) Rhodobacter sphaeroides ATCC 17029 4898252 YP_001045449.1 CDS Rsph17029_3586 NC_009050.1 678422 679618 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpa:BPP3974 putative amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit complement(678422..679618) Rhodobacter sphaeroides ATCC 17029 4898154 YP_001045450.1 CDS Rsph17029_3587 NC_009050.1 679707 680744 R SMART: extracellular solute-binding protein, family 3; KEGG: sme:SMc02118 probable general L-amino acid-binding periplasmic ABC transporter protein; extracellular solute-binding protein complement(679707..680744) Rhodobacter sphaeroides ATCC 17029 4898155 YP_001045451.1 CDS Rsph17029_3588 NC_009050.1 680860 682026 D KEGG: rru:Rru_A1613 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; cystathionine beta-lyase 680860..682026 Rhodobacter sphaeroides ATCC 17029 4898156 YP_001045452.1 CDS Rsph17029_3589 NC_009050.1 682170 682826 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: jan:Jann_1244 transcriptional regulator, GntR family; GntR family transcriptional regulator 682170..682826 Rhodobacter sphaeroides ATCC 17029 4898858 YP_001045453.1 CDS Rsph17029_3591 NC_009050.1 683760 684179 D hypothetical protein 683760..684179 Rhodobacter sphaeroides ATCC 17029 4899075 YP_001045454.1 CDS Rsph17029_3592 NC_009050.1 684160 685119 R KEGG: rru:Rru_A2387 ABC transporter, periplasmic substrate-binding protein, putative; ABC transporter, periplasmic substrate-binding protein, putative complement(684160..685119) Rhodobacter sphaeroides ATCC 17029 4898860 YP_001045455.1 CDS Rsph17029_3593 NC_009050.1 685116 686003 R PFAM: ABC-3 protein; KEGG: psb:Psyr_1949 ABC-3; ABC-3 protein complement(685116..686003) Rhodobacter sphaeroides ATCC 17029 4898366 YP_001045456.1 CDS Rsph17029_3594 NC_009050.1 686000 686752 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_33550 putative ATP-binding component of ABC transporter; ABC transporter complement(686000..686752) Rhodobacter sphaeroides ATCC 17029 4898367 YP_001045457.1 CDS Rsph17029_3595 NC_009050.1 686749 687669 R PFAM: periplasmic solute binding protein; KEGG: pst:PSPTO_2141 cation ABC transporter, periplasmic cation-binding protein; periplasmic solute binding protein complement(686749..687669) Rhodobacter sphaeroides ATCC 17029 4898517 YP_001045458.1 CDS Rsph17029_3596 NC_009050.1 687666 688220 R KEGG: pae:PA2406 hypothetical protein; hypothetical protein complement(687666..688220) Rhodobacter sphaeroides ATCC 17029 4898518 YP_001045459.1 CDS Rsph17029_3597 NC_009050.1 688217 688543 R KEGG: pau:PA14_33580 hypothetical protein; hypothetical protein complement(688217..688543) Rhodobacter sphaeroides ATCC 17029 4898519 YP_001045460.1 CDS Rsph17029_3598 NC_009050.1 688540 689367 R KEGG: psp:PSPPH_1920 hypothetical protein; hypothetical protein complement(688540..689367) Rhodobacter sphaeroides ATCC 17029 4898784 YP_001045461.1 CDS Rsph17029_3599 NC_009050.1 689364 689660 R KEGG: pfl:PFL_0985 hypothetical protein; hypothetical protein complement(689364..689660) Rhodobacter sphaeroides ATCC 17029 4898785 YP_001045462.1 CDS Rsph17029_3600 NC_009050.1 689644 691299 R PFAM: PepSY-associated TM helix domain protein; KEGG: xcv:XCV0278 hypothetical protein; PepSY-associated TM helix domain-containing protein complement(689644..691299) Rhodobacter sphaeroides ATCC 17029 4898786 YP_001045463.1 CDS Rsph17029_3601 NC_009050.1 691370 693880 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG: nwi:Nwi_1732 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(691370..693880) Rhodobacter sphaeroides ATCC 17029 4898448 YP_001045464.1 CDS Rsph17029_3602 NC_009050.1 694017 694979 R PFAM: FecR protein; KEGG: rru:Rru_A1439 putative FecR; putative FecR protein complement(694017..694979) Rhodobacter sphaeroides ATCC 17029 4898449 YP_001045465.1 CDS Rsph17029_3603 NC_009050.1 695097 695618 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_2994 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor complement(695097..695618) Rhodobacter sphaeroides ATCC 17029 4898450 YP_001045466.1 CDS Rsph17029_3604 NC_009050.1 696149 696793 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: reh:H16_B1722 transcriptional regulator; GntR family transcriptional regulator complement(696149..696793) Rhodobacter sphaeroides ATCC 17029 4898339 YP_001045467.1 CDS Rsph17029_3605 NC_009050.1 697236 698102 D PFAM: transcriptional regulator TrmB; KEGG: bbr:BB3556 putative transcriptional regulator; transcriptional regulator TrmB 697236..698102 Rhodobacter sphaeroides ATCC 17029 4898340 YP_001045468.1 CDS Rsph17029_3606 NC_009050.1 698358 698657 R KEGG: bxe:Bxe_A2050 putative tricarboxylic transporter, TctA (12TM)subunit; hypothetical protein complement(698358..698657) Rhodobacter sphaeroides ATCC 17029 4898341 YP_001045469.1 CDS Rsph17029_3607 NC_009050.1 698976 700184 R PFAM: protein of unknown function DUF453; KEGG: bbr:BB3558 hypothetical protein; hypothetical protein complement(698976..700184) Rhodobacter sphaeroides ATCC 17029 4898409 YP_001045470.1 CDS Rsph17029_3608 NC_009050.1 700192 701598 R PFAM: MmgE/PrpD family protein; KEGG: bbr:BB3562 hypothetical protein; MmgE/PrpD family protein complement(700192..701598) Rhodobacter sphaeroides ATCC 17029 4898410 YP_001045471.1 CDS Rsph17029_3609 NC_009050.1 701977 702534 D PFAM: Chromate transporter; KEGG: bch:Bcen2424_3011 chromate transporter; chromate transporter 701977..702534 Rhodobacter sphaeroides ATCC 17029 4898411 YP_001045472.1 CDS Rsph17029_3610 NC_009050.1 702537 703064 D PFAM: Chromate transporter; KEGG: rpa:RPA3497 possible chromate transporter related to ChrA; chromate transporter 702537..703064 Rhodobacter sphaeroides ATCC 17029 4898392 YP_001045473.1 CDS Rsph17029_3611 NC_009050.1 703106 703933 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB3563 putative ATP-binding protein of a transporter; ABC transporter complement(703106..703933) Rhodobacter sphaeroides ATCC 17029 4898393 YP_001045474.1 CDS Rsph17029_3612 NC_009050.1 703920 704750 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB3564 probable inner membrane component of binding-protein-dependent transport system; binding-protein-dependent transport system inner membrane protein complement(703920..704750) Rhodobacter sphaeroides ATCC 17029 4898394 YP_001045475.1 CDS Rsph17029_3613 NC_009050.1 704747 705880 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB3565 probable inner membrane component of binding-protein-dependent transport system; binding-protein-dependent transport system inner membrane protein complement(704747..705880) Rhodobacter sphaeroides ATCC 17029 4898225 YP_001045476.1 CDS Rsph17029_3614 NC_009050.1 706026 706949 D PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: mlo:mlr4742 2-dehydro-3-deoxygalactonate kinase; 2-keto-3-deoxy-galactonokinase 706026..706949 Rhodobacter sphaeroides ATCC 17029 4898226 YP_001045477.1 CDS Rsph17029_3615 NC_009050.1 706957 707583 D catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 706957..707583 Rhodobacter sphaeroides ATCC 17029 4898187 YP_001045478.1 CDS Rsph17029_3616 NC_009050.1 707605 708363 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ilo:IL0306 transcriptional regulator, FadR family; GntR family transcriptional regulator complement(707605..708363) Rhodobacter sphaeroides ATCC 17029 4898188 YP_001045479.1 CDS Rsph17029_3617 NC_009050.1 708458 710257 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(708458..710257) Rhodobacter sphaeroides ATCC 17029 4898189 YP_001045480.1 CDS Rsph17029_3618 NC_009050.1 710324 711640 R TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sil:SPOA0333 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(710324..711640) Rhodobacter sphaeroides ATCC 17029 4898662 YP_001045481.1 CDS Rsph17029_3619 NC_009050.1 711637 712233 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sil:SPOA0334 TRAP dicarboxylate family transporter, DctQ subunit; tripartite ATP-independent periplasmic transporter DctQ complement(711637..712233) Rhodobacter sphaeroides ATCC 17029 4898663 YP_001045482.1 CDS Rsph17029_3620 NC_009050.1 712331 713422 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sil:SPOA0335 TRAP dicarboxylate family transporter, DctP subunit; TRAP dicarboxylate transporter- DctP subunit complement(712331..713422) Rhodobacter sphaeroides ATCC 17029 4898664 YP_001045483.1 CDS Rsph17029_3621 NC_009050.1 713403 714446 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 11; KEGG: bja:blr5278 IdnD L-idonate 5-dehydrogenase; alcohol dehydrogenase complement(713403..714446) Rhodobacter sphaeroides ATCC 17029 4898100 YP_001045484.1 CDS Rsph17029_3622 NC_009050.1 714446 715213 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: atc:AGR_C_2598 probable gluconate dehydrogenase; short-chain dehydrogenase/reductase SDR complement(714446..715213) Rhodobacter sphaeroides ATCC 17029 4898101 YP_001045485.1 CDS Rsph17029_3623 NC_009050.1 715214 716428 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: bja:blr5276 hypothetical protein; mandelate racemase/muconate lactonizing protein complement(715214..716428) Rhodobacter sphaeroides ATCC 17029 4898102 YP_001045486.1 CDS Rsph17029_3624 NC_009050.1 716615 717763 R PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: sme:SMb20510 probable galactonate dehydratase protein; galactonate dehydratase complement(716615..717763) Rhodobacter sphaeroides ATCC 17029 4898603 YP_001045487.1 CDS Rsph17029_3625 NC_009050.1 718088 718696 R hypothetical protein complement(718088..718696) Rhodobacter sphaeroides ATCC 17029 4898604 YP_001045488.1 CDS Rsph17029_3626 NC_009050.1 718797 720449 R PFAM: Animal haem peroxidase; KEGG: rde:RD1_1072 putative cyclooxygenase; heme peroxidase complement(718797..720449) Rhodobacter sphaeroides ATCC 17029 4898605 YP_001045489.1 CDS Rsph17029_3627 NC_009050.1 720446 721765 R KEGG: bja:bll0020 hypothetical protein; hypothetical protein complement(720446..721765) Rhodobacter sphaeroides ATCC 17029 4898135 YP_001045490.1 CDS Rsph17029_3628 NC_009050.1 722254 724104 D hypothetical protein 722254..724104 Rhodobacter sphaeroides ATCC 17029 4898136 YP_001045491.1 CDS Rsph17029_3629 NC_009050.1 724104 725129 D hypothetical protein 724104..725129 Rhodobacter sphaeroides ATCC 17029 4898137 YP_001045492.1 CDS Rsph17029_3630 NC_009050.1 725269 728628 R catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoacid ferredoxin oxidoreductase complement(725269..728628) Rhodobacter sphaeroides ATCC 17029 4898211 YP_001045493.1 CDS Rsph17029_3631 NC_009050.1 728625 730016 R PFAM: FAD linked oxidase domain protein; KEGG: mlo:mlr7184 hypothetical protein; FAD linked oxidase domain-containing protein complement(728625..730016) Rhodobacter sphaeroides ATCC 17029 4898212 YP_001045494.1 CDS Rsph17029_3632 NC_009050.1 730196 731209 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rle:pRL120182 putative alcohol dehydrogenase; alcohol dehydrogenase 730196..731209 Rhodobacter sphaeroides ATCC 17029 4898213 YP_001045495.1 CDS Rsph17029_3633 NC_009050.1 731223 732032 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rle:pRL120176 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 731223..732032 Rhodobacter sphaeroides ATCC 17029 4898143 YP_001045496.1 CDS Rsph17029_3634 NC_009050.1 732049 733731 R PFAM: AMP-dependent synthetase and ligase; KEGG: psb:Psyr_2726 feruloyl-CoA synthase; AMP-dependent synthetase and ligase complement(732049..733731) Rhodobacter sphaeroides ATCC 17029 4898144 YP_001045497.1 CDS Rsph17029_3635 NC_009050.1 733740 734486 R PFAM: regulatory protein GntR, HTH; protein of unknown function UPF0074; GntR domain protein; Helix-turn-helix, type 11 domain protein; KEGG: rle:pRL120181 putative GntR family transcriptional regulator; regulatory protein GntR complement(733740..734486) Rhodobacter sphaeroides ATCC 17029 4898643 YP_001045498.1 CDS Rsph17029_3636 NC_009050.1 734649 735680 D PFAM: extracellular solute-binding protein, family 1; KEGG: rle:pRL120172 putative substrate-binding component of ABC transporter; extracellular solute-binding protein 734649..735680 Rhodobacter sphaeroides ATCC 17029 4898644 YP_001045499.1 CDS Rsph17029_3637 NC_009050.1 735774 736817 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_4419 ABC transporter related; ABC transporter 735774..736817 Rhodobacter sphaeroides ATCC 17029 4898645 YP_001045500.1 CDS Rsph17029_3638 NC_009050.1 736814 737689 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120170 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 736814..737689 Rhodobacter sphaeroides ATCC 17029 4899011 YP_001045501.1 CDS Rsph17029_3639 NC_009050.1 737686 738492 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120169 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 737686..738492 Rhodobacter sphaeroides ATCC 17029 4899012 YP_001045502.1 CDS Rsph17029_3640 NC_009050.1 738799 739554 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: mes:Meso_3619 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(738799..739554) Rhodobacter sphaeroides ATCC 17029 4899013 YP_001045503.1 CDS Rsph17029_3641 NC_009050.1 739545 740549 R PFAM: Transketolase, central region; Transketolase domain protein; KEGG: mes:Meso_3618 transketolase, central region; transketolase, central region complement(739545..740549) Rhodobacter sphaeroides ATCC 17029 4898597 YP_001045504.1 CDS Rsph17029_3642 NC_009050.1 740546 741391 R PFAM: Transketolase domain protein; KEGG: mes:Meso_3617 transketolase-like; transketolase domain-containing protein complement(740546..741391) Rhodobacter sphaeroides ATCC 17029 4898598 YP_001045505.1 CDS Rsph17029_3643 NC_009050.1 741408 742271 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3616 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(741408..742271) Rhodobacter sphaeroides ATCC 17029 4898599 YP_001045506.1 CDS Rsph17029_3644 NC_009050.1 742286 744148 R PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mes:Meso_3615 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(742286..744148) Rhodobacter sphaeroides ATCC 17029 4898756 YP_001045507.1 CDS Rsph17029_3645 NC_009050.1 744256 745269 R TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mes:Meso_3614 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter, DctP subunit complement(744256..745269) Rhodobacter sphaeroides ATCC 17029 4898757 YP_001045508.1 CDS Rsph17029_3646 NC_009050.1 745480 746352 D PFAM: regulatory proteins, IclR; KEGG: mes:Meso_3613 transcriptional regulator, IclR family; regulatory proteins, IclR 745480..746352 Rhodobacter sphaeroides ATCC 17029 4898758 YP_001045509.1 CDS Rsph17029_3647 NC_009050.1 746336 747223 D KEGG: mes:Meso_3612 hypothetical protein; hypothetical protein 746336..747223 Rhodobacter sphaeroides ATCC 17029 4898201 YP_001045510.1 CDS Rsph17029_3648 NC_009050.1 747227 749518 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mes:Meso_3611 molybdopterin oxidoreductase; molybdopterin oxidoreductase 747227..749518 Rhodobacter sphaeroides ATCC 17029 4898202 YP_001045511.1 CDS Rsph17029_3649 NC_009050.1 749777 750427 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pol:Bpro_1715 transcriptional regulator, GntR family; GntR family transcriptional regulator 749777..750427 Rhodobacter sphaeroides ATCC 17029 4898203 YP_001045512.1 CDS Rsph17029_3650 NC_009050.1 750982 751866 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 750982..751866 Rhodobacter sphaeroides ATCC 17029 4898799 YP_001045513.1 CDS Rsph17029_3651 NC_009050.1 752043 753098 D PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hch:HCH_04273 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; TRAP dicarboxylate transporter- DctP subunit 752043..753098 Rhodobacter sphaeroides ATCC 17029 4898800 YP_001045514.1 CDS Rsph17029_3652 NC_009050.1 753196 753816 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: hch:HCH_04274 TRAP-type mannitol/chloroaromatic compound transport system, small permease component; tripartite ATP-independent periplasmic transporter DctQ 753196..753816 Rhodobacter sphaeroides ATCC 17029 4898801 YP_001045515.1 CDS Rsph17029_3653 NC_009050.1 753816 755177 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: hch:HCH_04275 TRAP-type mannitol/chloroaromatic compound transport system, large permease component; TRAP dicarboxylate transporter subunit DctM 753816..755177 Rhodobacter sphaeroides ATCC 17029 4898304 YP_001045516.1 CDS Rsph17029_3654 NC_009050.1 755412 755819 D PFAM: cobalamin B12-binding domain protein; KEGG: nca:Noca_2128 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 755412..755819 Rhodobacter sphaeroides ATCC 17029 4898305 YP_001045517.1 CDS Rsph17029_3655 NC_009050.1 755819 757264 D KEGG: rru:Rru_A0790 phenylacetate--CoA ligase; phenylacetate--CoA ligase 755819..757264 Rhodobacter sphaeroides ATCC 17029 4898631 YP_001045518.1 CDS Rsph17029_3656 NC_009050.1 757264 758235 D KEGG: ade:Adeh_1649 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 757264..758235 Rhodobacter sphaeroides ATCC 17029 4898632 YP_001045519.1 CDS Rsph17029_3657 NC_009050.1 758228 759919 D KEGG: pab:PAB1800 methylmalonyl-CoA mutase, subunit alpha, N-terminus; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 758228..759919 Rhodobacter sphaeroides ATCC 17029 4898633 YP_001045520.1 CDS Rsph17029_3658 NC_009050.1 759923 760210 D hypothetical protein 759923..760210 Rhodobacter sphaeroides ATCC 17029 4898306 YP_001045521.1 CDS Rsph17029_3659 NC_009050.1 760203 761246 D KEGG: aeh:Mlg_0205 transferase hexapeptide repeat containing protein; carbonic anhydrase 760203..761246 Rhodobacter sphaeroides ATCC 17029 4898307 YP_001045522.1 CDS Rsph17029_3660 NC_009050.1 761247 761822 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: psp:PSPPH_4096 ATP:cob(I)alamin adenosyltransferase, putative; ATP--cobalamin adenosyltransferase 761247..761822 Rhodobacter sphaeroides ATCC 17029 4898308 YP_001045523.1 CDS Rsph17029_3661 NC_009050.1 761911 762777 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sil:SPOA0344 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(761911..762777) Rhodobacter sphaeroides ATCC 17029 4898606 YP_001045524.1 CDS Rsph17029_3662 NC_009050.1 762874 763785 D PFAM: protein of unknown function DUF6, transmembrane; KEGG: bca:BCE_4826 hypothetical protein; hypothetical protein 762874..763785 Rhodobacter sphaeroides ATCC 17029 4898607 YP_001045525.1 CDS Rsph17029_3663 NC_009050.1 763877 764431 D PFAM: protein of unknown function DUF1089; KEGG: mlo:mll3441 hypothetical protein; hypothetical protein 763877..764431 Rhodobacter sphaeroides ATCC 17029 4898608 YP_001045526.1 CDS Rsph17029_3664 NC_009050.1 764439 765479 R PFAM: glycosyl transferase, group 1; KEGG: rde:RD1_2341 glycosyltransferase, putative; group 1 glycosyl transferase complement(764439..765479) Rhodobacter sphaeroides ATCC 17029 4898640 YP_001045527.1 CDS Rsph17029_3665 NC_009050.1 765476 766999 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2342 ABC transporter, permease protein, putative; binding-protein-dependent transport systems inner membrane component complement(765476..766999) Rhodobacter sphaeroides ATCC 17029 4898641 YP_001045528.1 CDS Rsph17029_3666 NC_009050.1 766996 767796 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: jan:Jann_0307 ABC transporter related; ABC transporter complement(766996..767796) Rhodobacter sphaeroides ATCC 17029 4898642 YP_001045529.1 CDS Rsph17029_3667 NC_009050.1 767789 768796 R KEGG: rde:RD1_2344 hypothetical protein; hypothetical protein complement(767789..768796) Rhodobacter sphaeroides ATCC 17029 4898657 YP_001045530.1 CDS Rsph17029_3668 NC_009050.1 768911 770437 R KEGG: pde:Pden_4358 sulfatase; sulfatase complement(768911..770437) Rhodobacter sphaeroides ATCC 17029 4898658 YP_001045531.1 CDS Rsph17029_3669 NC_009050.1 770419 771102 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rde:RD1_2347 hypothetical protein; CDP-alcohol phosphatidyltransferase complement(770419..771102) Rhodobacter sphaeroides ATCC 17029 4898659 YP_001045532.1 CDS Rsph17029_3670 NC_009050.1 771633 772169 D PFAM: cytochrome B561; KEGG: jan:Jann_0302 cytochrome b561; cytochrome B561 771633..772169 Rhodobacter sphaeroides ATCC 17029 4899014 YP_001045533.1 CDS Rsph17029_3671 NC_009050.1 772679 773914 R TIGRFAM: 4-coumarate--CoA ligase; KEGG: ilo:IL2386 4-coumarate-CoA ligase, putative; 4-coumarate--CoA ligase complement(772679..773914) Rhodobacter sphaeroides ATCC 17029 4899015 YP_001045534.1 CDS Rsph17029_3672 NC_009050.1 773926 774426 R hypothetical protein complement(773926..774426) Rhodobacter sphaeroides ATCC 17029 4899016 YP_001045535.1 CDS Rsph17029_3673 NC_009050.1 774423 774989 R hypothetical protein complement(774423..774989) Rhodobacter sphaeroides ATCC 17029 4898364 YP_001045536.1 CDS Rsph17029_3674 NC_009050.1 775004 775378 R TIGRFAM: photoactive yellow protein; KEGG: ilo:IL2385 photoactive yellow protein; photoactive yellow protein complement(775004..775378) Rhodobacter sphaeroides ATCC 17029 4898365 YP_001045537.1 CDS Rsph17029_3675 NC_009050.1 775403 775831 R hypothetical protein complement(775403..775831) Rhodobacter sphaeroides ATCC 17029 4898819 YP_001045538.1 CDS Rsph17029_3676 NC_009050.1 776536 777030 D KEGG: gox:GOX0533 hypothetical protein; hypothetical protein 776536..777030 Rhodobacter sphaeroides ATCC 17029 4898820 YP_001045539.1 CDS Rsph17029_3677 NC_009050.1 777038 777931 R PFAM: protein of unknown function DUF305; KEGG: sde:Sde_1942 hypothetical protein; hypothetical protein complement(777038..777931) Rhodobacter sphaeroides ATCC 17029 4898821 YP_001045540.1 CDS Rsph17029_3678 NC_009050.1 778009 782178 R PFAM: Cadherin; KEGG: ret:RHE_CH01374 hypothetical protein; cadherin complement(778009..782178) Rhodobacter sphaeroides ATCC 17029 4898484 YP_001045541.1 CDS Rsph17029_3679 NC_009050.1 782257 783474 R PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: sit:TM1040_0080 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K complement(782257..783474) Rhodobacter sphaeroides ATCC 17029 4898485 YP_001045542.1 CDS Rsph17029_3680 NC_009050.1 784478 785893 D PFAM: sugar transferase; KEGG: ret:RHE_CH01359 putative sugar transferase involved in lipopolysaccharide synthesis, UDP-galactose-lipid carriertransferase protein; undecaprenyl-phosphate galactose phosphotransferase 784478..785893 Rhodobacter sphaeroides ATCC 17029 4898486 YP_001045543.1 CDS Rsph17029_3681 NC_009050.1 785939 786970 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rle:pRL90147 putative epimerase; NAD-dependent epimerase/dehydratase 785939..786970 Rhodobacter sphaeroides ATCC 17029 4898508 YP_001045544.1 CDS Rsph17029_3682 NC_009050.1 787080 788951 D KEGG: rle:pRL90148 hypothetical protein; hypothetical protein 787080..788951 Rhodobacter sphaeroides ATCC 17029 4898509 YP_001045545.1 CDS Rsph17029_3683 NC_009050.1 788999 790003 D PFAM: glycosyl transferase, family 8; KEGG: bsu:BG10558 general stress protein A; glycosyl transferase family protein 788999..790003 Rhodobacter sphaeroides ATCC 17029 4898510 YP_001045546.1 CDS Rsph17029_3684 NC_009050.1 790000 791472 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: nha:Nham_3039 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 790000..791472 Rhodobacter sphaeroides ATCC 17029 4898822 YP_001045547.1 CDS Rsph17029_3685 NC_009050.1 791832 792098 D hypothetical protein 791832..792098 Rhodobacter sphaeroides ATCC 17029 4898823 YP_001045548.1 CDS Rsph17029_3686 NC_009050.1 792308 795508 D SMART: Parallel beta-helix repeat; KEGG: rle:pRL90140 putative calcium-binding hemolysin-like protein; parallel beta-helix repeat-containing protein 792308..795508 Rhodobacter sphaeroides ATCC 17029 4898824 YP_001045549.1 CDS Rsph17029_3687 NC_009050.1 795799 796323 D PFAM: transferase hexapeptide repeat containing protein; KEGG: mag:amb0106 acetyltransferase; hexapaptide repeat-containing transferase 795799..796323 Rhodobacter sphaeroides ATCC 17029 4898481 YP_001045550.1 CDS Rsph17029_3688 NC_009050.1 796320 797339 D PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rle:pRL90151 putative GFO/IDH/MocA family oxidoreductase; oxidoreductase domain-containing protein 796320..797339 Rhodobacter sphaeroides ATCC 17029 4898482 YP_001045551.1 CDS Rsph17029_3689 NC_009050.1 797336 798466 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90152 putative pleiotropic regulator; DegT/DnrJ/EryC1/StrS aminotransferase 797336..798466 Rhodobacter sphaeroides ATCC 17029 4898483 YP_001045552.1 CDS Rsph17029_3690 NC_009050.1 798463 799458 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: nha:Nham_3036 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 798463..799458 Rhodobacter sphaeroides ATCC 17029 4898336 YP_001045553.1 CDS Rsph17029_3691 NC_009050.1 799455 800648 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_CH01368 probable aminotransferase protein (involved in cell wall biogenesis); DegT/DnrJ/EryC1/StrS aminotransferase 799455..800648 Rhodobacter sphaeroides ATCC 17029 4898337 YP_001045554.1 CDS Rsph17029_3692 NC_009050.1 801005 803215 R PFAM: lipopolysaccharide biosynthesis; SMART: AAA ATPase; KEGG: rle:pRL90134 putative transmembrane polysaccaride biosynthesis protein; lipopolysaccharide biosynthesis protein complement(801005..803215) Rhodobacter sphaeroides ATCC 17029 4898338 YP_001045555.1 CDS Rsph17029_3693 NC_009050.1 803212 804327 R PFAM: glycosyl transferase, group 1; KEGG: ret:RHE_CH01352 probable glycosyltransferase protein; group 1 glycosyl transferase complement(803212..804327) Rhodobacter sphaeroides ATCC 17029 4898199 YP_001045556.1 CDS Rsph17029_3694 NC_009050.1 804317 805522 R PFAM: glycosyl transferase, group 1; KEGG: rle:pRL90136 putative glycosyl transferase; group 1 glycosyl transferase complement(804317..805522) Rhodobacter sphaeroides ATCC 17029 4898200 YP_001045557.1 CDS Rsph17029_3695 NC_009050.1 805519 806844 R PFAM: polysaccharide export protein; KEGG: mes:Meso_0652 polysaccharide export protein; polysaccharide export protein complement(805519..806844) Rhodobacter sphaeroides ATCC 17029 4898347 YP_001045558.1 CDS Rsph17029_3696 NC_009050.1 807172 808425 D PFAM: O-antigen polymerase; KEGG: rle:pRL90138 putative transmembrane exopolysaccharide production protein; O-antigen polymerase 807172..808425 Rhodobacter sphaeroides ATCC 17029 4898348 YP_001045559.1 CDS Rsph17029_3697 NC_009050.1 808422 809201 D TIGRFAM: methyltransferase FkbM family; KEGG: mpa:MAP0950c hypothetical protein; FkbM family methyltransferase 808422..809201 Rhodobacter sphaeroides ATCC 17029 4898349 YP_001045560.1 CDS Rsph17029_3698 NC_009050.1 809400 810248 D TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: dge:Dgeo_2647 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 809400..810248 Rhodobacter sphaeroides ATCC 17029 4898994 YP_001045561.1 CDS Rsph17029_3699 NC_009050.1 810245 811306 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rba:RB7482 CDP-tyvelose epimerase; NAD-dependent epimerase/dehydratase 810245..811306 Rhodobacter sphaeroides ATCC 17029 4898995 YP_001045562.1 CDS Rsph17029_3700 NC_009050.1 811358 812566 D PFAM: glycosyl transferase, group 1; KEGG: hne:HNE_1287 hypothetical protein; group 1 glycosyl transferase 811358..812566 Rhodobacter sphaeroides ATCC 17029 4898996 YP_001045563.1 CDS Rsph17029_3701 NC_009050.1 812764 813525 R PFAM: regulatory protein, LuxR; KEGG: bmb:BruAb2_0786 transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(812764..813525) Rhodobacter sphaeroides ATCC 17029 4898600 YP_001045564.1 CDS Rsph17029_3702 NC_009050.1 813886 814527 D KEGG: ace:Acel_1935 acetyltransferase (the isoleucine patch superfamily); acetyltransferase 813886..814527 Rhodobacter sphaeroides ATCC 17029 4898601 YP_001045565.1 CDS Rsph17029_3703 NC_009050.1 814553 814975 R hypothetical protein complement(814553..814975) Rhodobacter sphaeroides ATCC 17029 4898602 YP_001045566.1 CDS Rsph17029_3704 NC_009050.1 815184 815621 D PFAM: regulatory protein, MarR; KEGG: pde:Pden_2677 transcriptional regulator, MarR family; MarR family transcriptional regulator 815184..815621 Rhodobacter sphaeroides ATCC 17029 4898151 YP_001045567.1 CDS Rsph17029_3705 NC_009050.1 815618 817255 D PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00563 putative transport protein transmembrane; major facilitator transporter 815618..817255 Rhodobacter sphaeroides ATCC 17029 4898152 YP_001045568.1 CDS Rsph17029_3706 NC_009050.1 817252 818298 D PFAM: secretion protein HlyD family protein; KEGG: pde:Pden_2675 secretion protein HlyD family protein; secretion protein HlyD family protein 817252..818298 Rhodobacter sphaeroides ATCC 17029 4898153 YP_001045569.1 CDS Rsph17029_3708 NC_009050.1 824783 825436 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3424 hypothetical protein; short-chain dehydrogenase/reductase SDR 824783..825436 Rhodobacter sphaeroides ATCC 17029 4898857 YP_001045570.1 CDS Rsph17029_3710 NC_009050.1 825961 826302 D PFAM: IS66 Orf2 family protein; KEGG: rsp:RSP_4156 transposase, IS66 Orf2; IS66 Orf2 family protein 825961..826302 Rhodobacter sphaeroides ATCC 17029 4898946 YP_001045571.1 CDS Rsph17029_3713 NC_009050.1 828105 830114 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_0101 radical SAM; radical SAM domain-containing protein 828105..830114 Rhodobacter sphaeroides ATCC 17029 4898948 YP_001045572.1 CDS Rsph17029_3714 NC_009050.1 830101 832053 D PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: xcv:XCV0270 putative aminopeptidase precursor; peptidase S9 prolyl oligopeptidase 830101..832053 Rhodobacter sphaeroides ATCC 17029 4898869 YP_001045573.1 CDS Rsph17029_3715 NC_009050.1 832054 832698 R PFAM: nitroreductase; KEGG: tko:TK0840 NAD(P)H-flavin oxidoreductase; nitroreductase complement(832054..832698) Rhodobacter sphaeroides ATCC 17029 4898870 YP_001045574.1 CDS Rsph17029_3716 NC_009050.1 832839 834155 R TIGRFAM: uncharacterized domain; PFAM: protein of unknown function DUF181; KEGG: sat:SYN_00274 fatty acid binding protein; hypothetical protein complement(832839..834155) Rhodobacter sphaeroides ATCC 17029 4898871 YP_001045575.1 CDS Rsph17029_3717 NC_009050.1 834146 835207 R KEGG: pde:Pden_4197 UBA/ThiF-type NAD/FAD binding protein; hypothetical protein complement(834146..835207) Rhodobacter sphaeroides ATCC 17029 4898938 YP_001045576.1 CDS Rsph17029_3718 NC_009050.1 835289 835495 R hypothetical protein complement(835289..835495) Rhodobacter sphaeroides ATCC 17029 4898939 YP_001045577.1 CDS Rsph17029_3719 NC_009050.1 835839 836099 R hypothetical protein complement(835839..836099) Rhodobacter sphaeroides ATCC 17029 4899041 YP_001045578.1 CDS Rsph17029_3720 NC_009050.1 836135 837169 R PFAM: Radical SAM domain protein; KEGG: mca:MCA0891 hypothetical protein; radical SAM domain-containing protein complement(836135..837169) Rhodobacter sphaeroides ATCC 17029 4899042 YP_001045579.1 CDS Rsph17029_3721 NC_009050.1 838293 838709 R PFAM: DNA repair protein RadC; KEGG: rde:RD1_3690 DNA repair protein RadC; DNA repair protein RadC complement(838293..838709) Rhodobacter sphaeroides ATCC 17029 4899043 YP_001045580.1 CDS Rsph17029_3722 NC_009050.1 838725 838994 D PFAM: protein of unknown function DUF1330; KEGG: bur:Bcep18194_B2715 protein of unknown function DUF1330; hypothetical protein 838725..838994 Rhodobacter sphaeroides ATCC 17029 4898463 YP_001045581.1 CDS Rsph17029_3723 NC_009050.1 839006 840115 D PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: rde:RD1_3542 ATP-dependent DNA helicase, UvrD/REP family domain; DEAD/DEAH box helicase 839006..840115 Rhodobacter sphaeroides ATCC 17029 4898464 YP_001045582.1 CDS Rsph17029_3724 NC_009050.1 840470 841342 R KEGG: tfu:Tfu_0899 similar to V8-like Glu-specific endopeptidase; hypothetical protein complement(840470..841342) Rhodobacter sphaeroides ATCC 17029 4898465 YP_001045583.1 CDS Rsph17029_3725 NC_009050.1 842152 843069 D hypothetical protein 842152..843069 Rhodobacter sphaeroides ATCC 17029 4898771 YP_001045584.1 CDS Rsph17029_3726 NC_009050.1 843501 844673 D PFAM: transposase, IS4 family protein; KEGG: pde:Pden_2404 hypothetical protein; transposase, IS4 family protein 843501..844673 Rhodobacter sphaeroides ATCC 17029 4898772 YP_001045585.1 CDS Rsph17029_3727 NC_009050.1 844853 845977 R KEGG: gox:GOX2571 hypothetical protein; hypothetical protein complement(844853..845977) Rhodobacter sphaeroides ATCC 17029 4898773 YP_001045586.1 CDS Rsph17029_3728 NC_009050.1 846327 849203 R KEGG: cpf:CPF_1497 ATPase domain protein; HSP90 family molecular chaperone-like protein complement(846327..849203) Rhodobacter sphaeroides ATCC 17029 4898805 YP_001045587.1 CDS Rsph17029_3729 NC_009050.1 850422 850787 D KEGG: rde:RD1_C0006 mobilization protein; mobilization protein 850422..850787 Rhodobacter sphaeroides ATCC 17029 4898806 YP_001045588.1 CDS Rsph17029_3730 NC_009050.1 851104 852393 D PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bca:BCE_1587 sensor histidine kinase; histidine kinase 851104..852393 Rhodobacter sphaeroides ATCC 17029 4898807 YP_001045589.1 CDS Rsph17029_3731 NC_009050.1 852399 853253 D hypothetical protein 852399..853253 Rhodobacter sphaeroides ATCC 17029 4898324 YP_001045590.1 CDS Rsph17029_3732 NC_009050.1 853253 853873 D hypothetical protein 853253..853873 Rhodobacter sphaeroides ATCC 17029 4898325 YP_001045591.1 CDS Rsph17029_3733 NC_009050.1 853943 854989 D PFAM: Integrase, catalytic region; KEGG: rsp:RSP_1966 possible ISSod13, transposase; integrase catalytic subunit 853943..854989 Rhodobacter sphaeroides ATCC 17029 4898326 YP_001045592.1 CDS Rsph17029_3737 NC_009050.1 858751 859203 R KEGG: nwi:Nwi_0831 phage integrase; hypothetical protein complement(858751..859203) Rhodobacter sphaeroides ATCC 17029 4898841 YP_001045593.1 CDS Rsph17029_3738 NC_009050.1 859500 859817 D KEGG: sil:SPOA0091 IS3 family transposase orfA; hypothetical protein 859500..859817 Rhodobacter sphaeroides ATCC 17029 4898248 YP_001045594.1 CDS Rsph17029_3740 NC_009050.1 860933 861685 R PFAM: HpcH/HpaI aldolase; KEGG: rsp:RSP_3014 putative aldolase protein; HpcH/HpaI aldolase complement(860933..861685) Rhodobacter sphaeroides ATCC 17029 4898929 YP_001045595.1 CDS Rsph17029_3741 NC_009050.1 861685 862605 R PFAM: protein of unknown function DUF849; KEGG: rsp:RSP_3015 hypothetical protein; hypothetical protein complement(861685..862605) Rhodobacter sphaeroides ATCC 17029 4898503 YP_001045596.1 CDS Rsph17029_3742 NC_009050.1 862663 863526 R KEGG: rsp:RSP_3016 possible phenol degradation enzyme; putative phenol degradation enzyme complement(862663..863526) Rhodobacter sphaeroides ATCC 17029 4898504 YP_001045597.1 CDS Rsph17029_3743 NC_009050.1 863563 864081 R PFAM: flavin reductase domain protein, FMN-binding; KEGG: rsp:RSP_3017 nitrilotriacetate monooxygenase; flavin reductase domain-containing protein complement(863563..864081) Rhodobacter sphaeroides ATCC 17029 4898634 YP_001045598.1 CDS Rsph17029_3744 NC_009050.1 864155 865327 R PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_3018 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 complement(864155..865327) Rhodobacter sphaeroides ATCC 17029 4898635 YP_001045599.1 CDS Rsph17029_3745 NC_009050.1 865351 866025 R KEGG: rsp:RSP_3019 putative hydrolase; putative hydrolase complement(865351..866025) Rhodobacter sphaeroides ATCC 17029 4898636 YP_001045600.1 CDS Rsph17029_3746 NC_009050.1 866022 866492 R KEGG: rsp:RSP_3020 hypothetical protein; hypothetical protein complement(866022..866492) Rhodobacter sphaeroides ATCC 17029 4898654 YP_001045601.1 CDS Rsph17029_3747 NC_009050.1 866489 867403 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3021 putative catechol 2,3-dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(866489..867403) Rhodobacter sphaeroides ATCC 17029 4898655 YP_001045602.1 CDS Rsph17029_3748 NC_009050.1 867761 868588 D PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3022 transcriptional regulator, TetR family; TetR family transcriptional regulator 867761..868588 Rhodobacter sphaeroides ATCC 17029 4898656 YP_001045603.1 CDS Rsph17029_3749 NC_009050.1 868590 869495 R KEGG: rsp:RSP_3023 hypothetical protein; hypothetical protein complement(868590..869495) Rhodobacter sphaeroides ATCC 17029 4899162 YP_001045604.1 CDS Rsph17029_3750 NC_009050.1 869647 870246 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rsp:RSP_3025 possible NAD(P)H oxidoreductase; NAD(P)H dehydrogenase (quinone) 869647..870246 Rhodobacter sphaeroides ATCC 17029 4899163 YP_001045605.1 CDS Rsph17029_3751 NC_009050.1 870219 871055 R activator of 3-phenylpropionic acid catabolism; DNA-binding transcriptional activator MhpR complement(870219..871055) Rhodobacter sphaeroides ATCC 17029 4899164 YP_001045606.1 CDS Rsph17029_3753 NC_009050.1 871575 872945 R PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rsp:RSP_3026 transcriptional regulator, MocR family; GntR family transcriptional regulator complement(871575..872945) Rhodobacter sphaeroides ATCC 17029 4898930 YP_001045607.1 CDS Rsph17029_3754 NC_009050.1 873073 874482 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_3027 RdxA, iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin complement(873073..874482) Rhodobacter sphaeroides ATCC 17029 4898542 YP_001045608.1 CDS Rsph17029_3755 NC_009050.1 874886 876109 D catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 874886..876109 Rhodobacter sphaeroides ATCC 17029 4898543 YP_001045609.1 CDS Rsph17029_3756 NC_009050.1 876482 877213 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3029 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(876482..877213) Rhodobacter sphaeroides ATCC 17029 4898403 YP_001045610.1 CDS Rsph17029_3757 NC_009050.1 877303 878301 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3030 ABC peptide/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 877303..878301 Rhodobacter sphaeroides ATCC 17029 4898404 YP_001045611.1 CDS Rsph17029_3758 NC_009050.1 878303 879196 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3031 ABC peptide/opine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 878303..879196 Rhodobacter sphaeroides ATCC 17029 4898405 YP_001045612.1 CDS Rsph17029_3759 NC_009050.1 879193 880164 D KEGG: rsp:RSP_3032 ABC peptide/opine transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 879193..880164 Rhodobacter sphaeroides ATCC 17029 4898309 YP_001045613.1 CDS Rsph17029_3760 NC_009050.1 880161 881162 D KEGG: rsp:RSP_3033 ABC peptide/opine transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 880161..881162 Rhodobacter sphaeroides ATCC 17029 4898310 YP_001045614.1 CDS Rsph17029_3761 NC_009050.1 881200 882759 D PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3034 ABC peptide/opine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 881200..882759 Rhodobacter sphaeroides ATCC 17029 4898311 YP_001045615.1 CDS Rsph17029_3762 NC_009050.1 882881 884158 D PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rsp:RSP_3035 putative transporter, major facilitator superfamily (MFS); major facilitator transporter 882881..884158 Rhodobacter sphaeroides ATCC 17029 4898660 YP_001045616.1 CDS Rsph17029_3763 NC_009050.1 884197 886200 D PFAM: peptidase S15; X-Pro dipeptidyl-peptidase C-terminal domain protein; KEGG: rsp:RSP_3036 hypothetical protein; peptidase S15 884197..886200 Rhodobacter sphaeroides ATCC 17029 4898661 YP_001045617.1 CDS Rsph17029_3764 NC_009050.1 886344 887102 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3037 putative short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR complement(886344..887102) Rhodobacter sphaeroides ATCC 17029 4898750 YP_001045618.1 CDS Rsph17029_3765 NC_009050.1 887123 887926 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3038 ABC permidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(887123..887926) Rhodobacter sphaeroides ATCC 17029 4898751 YP_001045619.1 CDS Rsph17029_3766 NC_009050.1 887935 888786 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3039 ABC permidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(887935..888786) Rhodobacter sphaeroides ATCC 17029 4898752 YP_001045620.1 CDS Rsph17029_3767 NC_009050.1 888799 889956 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3040 ABC permidine/putrescine transporter, periplasmic substrate-binding protein; extracellular solute-binding protein complement(888799..889956) Rhodobacter sphaeroides ATCC 17029 4898861 YP_001045621.1 CDS Rsph17029_3768 NC_009050.1 890016 891113 R KEGG: rsp:RSP_3041 ABC permidine/putrescine transporter, ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(890016..891113) Rhodobacter sphaeroides ATCC 17029 4898862 YP_001045622.1 CDS Rsph17029_3769 NC_009050.1 891189 891962 D PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_3042 DMSO reductase regulatory protein DorX; regulatory protein LuxR 891189..891962 Rhodobacter sphaeroides ATCC 17029 4898863 YP_001045623.1 CDS Rsph17029_3771 NC_009050.1 893902 895269 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: rsp:RSP_3044 DMSO/TMAO-sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 893902..895269 Rhodobacter sphaeroides ATCC 17029 4898931 YP_001045624.1 CDS Rsph17029_3772 NC_009050.1 895287 895985 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3045 DMSO/TMAO-two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(895287..895985) Rhodobacter sphaeroides ATCC 17029 4898829 YP_001045625.1 CDS Rsph17029_3773 NC_009050.1 896255 897433 D TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: rsp:RSP_3046 DMSO/TMAO pentaheme cytochrome c subunit; trimethylamine-N-oxide reductase c-type cytochrome TorC 896255..897433 Rhodobacter sphaeroides ATCC 17029 4898830 YP_001045626.1 CDS Rsph17029_3774 NC_009050.1 897430 898110 D PFAM: cytoplasmic chaperone TorD family protein; KEGG: rsp:RSP_3047 DMSO-membrane protein; cytoplasmic chaperone TorD family protein 897430..898110 Rhodobacter sphaeroides ATCC 17029 4898898 YP_001045627.1 CDS Rsph17029_3775 NC_009050.1 898107 900575 D KEGG: rsp:RSP_3048 DMSO/TMAO-reductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductases 898107..900575 Rhodobacter sphaeroides ATCC 17029 4898899 YP_001045628.1 CDS Rsph17029_3776 NC_009050.1 900706 901938 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rsp:RSP_3049 molybdenum cofactor biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 900706..901938 Rhodobacter sphaeroides ATCC 17029 4898900 YP_001045629.1 CDS Rsph17029_3777 NC_009050.1 901995 903011 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 901995..903011 Rhodobacter sphaeroides ATCC 17029 4898583 YP_001045630.1 CDS Rsph17029_3778 NC_009050.1 903191 905170 D PFAM: protein of unknown function DUF839; KEGG: rsp:RSP_3051 putative phosphatase; hypothetical protein 903191..905170 Rhodobacter sphaeroides ATCC 17029 4898584 YP_001045631.1 CDS Rsph17029_3779 NC_009050.1 905466 906344 R PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3052 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(905466..906344) Rhodobacter sphaeroides ATCC 17029 4898585 YP_001045632.1 CDS Rsph17029_3780 NC_009050.1 906505 907434 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3053 possible dioxygenase/glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 906505..907434 Rhodobacter sphaeroides ATCC 17029 4898571 YP_001045633.1 CDS Rsph17029_3781 NC_009050.1 907770 908387 D PFAM: phospholipase/Carboxylesterase; KEGG: rsp:RSP_3054 hypothetical protein; phospholipase/carboxylesterase 907770..908387 Rhodobacter sphaeroides ATCC 17029 4898572 YP_001045634.1 CDS Rsph17029_3782 NC_009050.1 908502 908786 R PFAM: SH3, type 3 domain protein; KEGG: rsp:RSP_6161 hypothetical protein; SH3 type 3 domain-containing protein complement(908502..908786) Rhodobacter sphaeroides ATCC 17029 4898573 YP_001045635.1 CDS Rsph17029_3783 NC_009050.1 909016 909486 D PFAM: regulatory protein, MarR; KEGG: rsp:RSP_3055 transcriptional regulator, MarR family; MarR family transcriptional regulator 909016..909486 Rhodobacter sphaeroides ATCC 17029 4899185 YP_001045636.1 CDS Rsph17029_3784 NC_009050.1 909513 911447 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rsp:RSP_3056 TonB dependent-iron siderophore receptor; TonB-dependent receptor complement(909513..911447) Rhodobacter sphaeroides ATCC 17029 4899186 YP_001045637.1 CDS Rsph17029_3785 NC_009050.1 911950 913041 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3057 ABC proline/glycine betaine transporter, ATPase subunit; ABC transporter complement(911950..913041) Rhodobacter sphaeroides ATCC 17029 4898665 YP_001045638.1 CDS Rsph17029_3786 NC_009050.1 913034 913945 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3058 ABC proline/glycine betaine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(913034..913945) Rhodobacter sphaeroides ATCC 17029 4898666 YP_001045639.1 CDS Rsph17029_3787 NC_009050.1 914013 915014 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rsp:RSP_3059 ABC proline/glycine betaine transporter, periplasmic substrate-binding protein; substrate-binding region of ABC-type glycine betaine transport system complement(914013..915014) Rhodobacter sphaeroides ATCC 17029 4898667 YP_001045640.1 CDS Rsph17029_3788 NC_009050.1 915892 916548 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_3060 possible O-acetylserine synthase; hexapaptide repeat-containing transferase 915892..916548 Rhodobacter sphaeroides ATCC 17029 4899006 YP_001045641.1 CDS Rsph17029_3789 NC_009050.1 916575 916886 D KEGG: rsp:RSP_3061 hypothetical protein; hypothetical protein 916575..916886 Rhodobacter sphaeroides ATCC 17029 4899007 YP_001045642.1 CDS Rsph17029_3790 NC_009050.1 916883 917578 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3062 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 916883..917578 Rhodobacter sphaeroides ATCC 17029 4899008 YP_001045643.1 CDS Rsph17029_3791 NC_009050.1 917580 918920 D PFAM: AMP-dependent synthetase and ligase; KEGG: rsp:RSP_3063 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 917580..918920 Rhodobacter sphaeroides ATCC 17029 4899003 YP_001045644.1 CDS Rsph17029_3792 NC_009050.1 919053 919835 D PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rsp:RSP_3064 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 919053..919835 Rhodobacter sphaeroides ATCC 17029 4899004 YP_001045645.1 CDS Rsph17029_3793 NC_009050.1 920092 921225 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_3065 putative transporter, major facilitator superfamily (MFS); major facilitator transporter 920092..921225 Rhodobacter sphaeroides ATCC 17029 4899005 YP_001045646.1 CDS Rsph17029_3794 NC_009050.1 921364 922656 D KEGG: rsp:RSP_3067 hypothetical protein; hypothetical protein 921364..922656 Rhodobacter sphaeroides ATCC 17029 4899093 YP_001045647.1 CDS Rsph17029_3795 NC_009050.1 922653 923375 D KEGG: rsp:RSP_3068 hypothetical protein; hypothetical protein 922653..923375 Rhodobacter sphaeroides ATCC 17029 4899094 YP_001045648.1 CDS Rsph17029_3796 NC_009050.1 923673 924230 R PFAM: NADPH-dependent FMN reductase; KEGG: rsp:RSP_3069 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(923673..924230) Rhodobacter sphaeroides ATCC 17029 4899095 YP_001045649.1 CDS Rsph17029_3797 NC_009050.1 924632 925903 D PFAM: MOFRL domain protein; KEGG: rsp:RSP_3071 putative hydroxypyruvate reductase/glycerate kinase; hydroxypyruvate reductase 924632..925903 Rhodobacter sphaeroides ATCC 17029 4898262 YP_001045650.1 CDS Rsph17029_3798 NC_009050.1 925872 926906 R PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: rsp:RSP_3070 hypothetical protein; NAD-dependent epimerase/dehydratase complement(925872..926906) Rhodobacter sphaeroides ATCC 17029 4898263 YP_001045651.1 CDS Rsph17029_3799 NC_009050.1 927145 928434 R KEGG: rsp:RSP_3072 putative L-sorbosone dehydrogenase; putative L-sorbosone dehydrogenase complement(927145..928434) Rhodobacter sphaeroides ATCC 17029 4898264 YP_001045652.1 CDS Rsph17029_3800 NC_009050.1 928811 929362 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rsp:RSP_3073 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 928811..929362 Rhodobacter sphaeroides ATCC 17029 4898436 YP_001045653.1 CDS Rsph17029_3801 NC_009050.1 929669 931507 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(929669..931507) Rhodobacter sphaeroides ATCC 17029 4898437 YP_001045654.1 CDS Rsph17029_3802 NC_009050.1 931746 932993 D PFAM: protein of unknown function DUF323; KEGG: rsp:RSP_3075 hypothetical protein; hypothetical protein 931746..932993 Rhodobacter sphaeroides ATCC 17029 4898438 YP_001045655.1 CDS Rsph17029_3803 NC_009050.1 932993 933925 D KEGG: rsp:RSP_3076 hypothetical protein; hypothetical protein 932993..933925 Rhodobacter sphaeroides ATCC 17029 4898415 YP_001045656.1 CDS Rsph17029_3804 NC_009050.1 934056 935582 R PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rsp:RSP_3077 hypothetical protein; deoxyribodipyrimidine photolyase-like protein complement(934056..935582) Rhodobacter sphaeroides ATCC 17029 4898416 YP_001045657.1 CDS Rsph17029_3805 NC_009050.1 935687 935971 R KEGG: rsp:RSP_3078 hypothetical protein; hypothetical protein complement(935687..935971) Rhodobacter sphaeroides ATCC 17029 4898668 YP_001045658.1 CDS Rsph17029_3806 NC_009050.1 936099 936992 D PFAM: periplasmic binding protein; KEGG: rsp:RSP_3079 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; periplasmic binding protein 936099..936992 Rhodobacter sphaeroides ATCC 17029 4898669 YP_001045659.1 CDS Rsph17029_3807 NC_009050.1 937048 938703 R TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: rsp:RSP_3080 choline/carnitine/betaine transporter, BCCT family; choline/carnitine/betaine transporter complement(937048..938703) Rhodobacter sphaeroides ATCC 17029 4898670 YP_001045660.1 CDS Rsph17029_3808 NC_009050.1 939217 940920 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3081 ABC multidrug efflux transporter, fused ATPase and inner membrane subunits; ABC transporter complement(939217..940920) Rhodobacter sphaeroides ATCC 17029 4898559 YP_001045661.1 CDS Rsph17029_3809 NC_009050.1 941490 941837 D KEGG: rsp:RSP_3082 hypothetical protein; hypothetical protein 941490..941837 Rhodobacter sphaeroides ATCC 17029 4898560 YP_001045662.1 CDS Rsph17029_3810 NC_009050.1 941938 943623 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3083 methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(941938..943623) Rhodobacter sphaeroides ATCC 17029 4898561 YP_001045663.1 CDS Rsph17029_3811 NC_009050.1 943637 944323 R KEGG: rsp:RSP_3084 hypothetical protein; hypothetical protein complement(943637..944323) Rhodobacter sphaeroides ATCC 17029 4899132 YP_001045664.1 CDS Rsph17029_3812 NC_009050.1 944619 946268 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: rsp:RSP_3085 hypothetical protein; sulfatase 944619..946268 Rhodobacter sphaeroides ATCC 17029 4899133 YP_001045665.1 CDS Rsph17029_3813 NC_009050.1 946279 946659 D PFAM: diacylglycerol kinase; KEGG: rsp:RSP_3087 diacylglycerol kinase; diacylglycerol kinase 946279..946659 Rhodobacter sphaeroides ATCC 17029 4899134 YP_001045666.1 CDS Rsph17029_3814 NC_009050.1 946641 947957 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3086 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(946641..947957) Rhodobacter sphaeroides ATCC 17029 4898969 YP_001045667.1 CDS Rsph17029_3815 NC_009050.1 947954 948613 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3088 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(947954..948613) Rhodobacter sphaeroides ATCC 17029 4898970 YP_001045668.1 CDS Rsph17029_3816 NC_009050.1 948908 949300 R PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rsp:RSP_3089 hypothetical protein; glutathione-dependent formaldehyde-activating protein complement(948908..949300) Rhodobacter sphaeroides ATCC 17029 4898971 YP_001045669.1 CDS Rsph17029_3817 NC_009050.1 949713 950051 D TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; KEGG: rsp:RSP_3090 putative alkylphosphonate uptake protein, PhnA; alkylphosphonate utilization operon protein PhnA 949713..950051 Rhodobacter sphaeroides ATCC 17029 4898544 YP_001045670.1 CDS Rsph17029_3818 NC_009050.1 950110 950706 R KEGG: rsp:RSP_3091 conserved hypothetical protein; hypothetical protein complement(950110..950706) Rhodobacter sphaeroides ATCC 17029 4898545 YP_001045671.1 CDS Rsph17029_3819 NC_009050.1 950937 951515 R KEGG: rsp:RSP_3092 hypothetical protein; hypothetical protein complement(950937..951515) Rhodobacter sphaeroides ATCC 17029 4898546 YP_001045672.1 CDS Rsph17029_3820 NC_009050.1 951540 952253 R PFAM: protein of unknown function UPF0005; KEGG: rsp:RSP_3093 predicted integral membrane protein; hypothetical protein complement(951540..952253) Rhodobacter sphaeroides ATCC 17029 4898586 YP_001045673.1 CDS Rsph17029_3821 NC_009050.1 952282 953049 R KEGG: rsp:RSP_3094 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor complement(952282..953049) Rhodobacter sphaeroides ATCC 17029 4898587 YP_001045674.1 CDS Rsph17029_3822 NC_009050.1 953042 953572 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; RNA polymerase sigma factor complement(953042..953572) Rhodobacter sphaeroides ATCC 17029 4898588 YP_001045675.1 CDS Rsph17029_3823 NC_009050.1 953638 953946 R KEGG: rsp:RSP_3096 hypothetical protein; hypothetical protein complement(953638..953946) Rhodobacter sphaeroides ATCC 17029 4898907 YP_001045676.1 CDS Rsph17029_3824 NC_009050.1 953943 956420 R PFAM: cytochrome c oxidase, subunit I; KEGG: rsp:RSP_3097 QoxA, quinol oxidase subunit I; cytochrome-c oxidase complement(953943..956420) Rhodobacter sphaeroides ATCC 17029 4898908 YP_001045677.1 CDS Rsph17029_3825 NC_009050.1 956417 956986 R PFAM: cytochrome c oxidase, subunit II; KEGG: rsp:RSP_3098 QoxB, quinol oxidase subunit II; cytochrome c oxidase, subunit II complement(956417..956986) Rhodobacter sphaeroides ATCC 17029 4898707 YP_001045678.1 CDS Rsph17029_3826 NC_009050.1 957089 957604 D KEGG: rpb:RPB_0157 hypothetical protein; hypothetical protein 957089..957604 Rhodobacter sphaeroides ATCC 17029 4898708 YP_001045679.1 CDS Rsph17029_3827 NC_009050.1 957574 958086 R KEGG: rsp:RSP_3100 hypothetical protein; hypothetical protein complement(957574..958086) Rhodobacter sphaeroides ATCC 17029 4898709 YP_001045680.1 CDS Rsph17029_3828 NC_009050.1 958224 960542 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; KEGG: rsp:RSP_3101 periplasmic sensor diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase complement(958224..960542) Rhodobacter sphaeroides ATCC 17029 4898617 YP_001045681.1 CDS Rsph17029_3829 NC_009050.1 960633 960908 R hypothetical protein complement(960633..960908) Rhodobacter sphaeroides ATCC 17029 4898618 YP_001045682.1 CDS Rsph17029_3830 NC_009050.1 961011 961202 R PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rsp:RSP_3102 putative sec-independent protein translocase protein, TatE; sec-independent translocation protein mttA/Hcf106 complement(961011..961202) Rhodobacter sphaeroides ATCC 17029 4898619 YP_001045683.1 CDS Rsph17029_3831 NC_009050.1 961257 961634 R hypothetical protein complement(961257..961634) Rhodobacter sphaeroides ATCC 17029 4898265 YP_001045684.1 CDS Rsph17029_3832 NC_009050.1 961769 962407 D PFAM: cyclase/dehydrase; KEGG: rsp:RSP_3103 hypothetical protein; cyclase/dehydrase 961769..962407 Rhodobacter sphaeroides ATCC 17029 4898266 YP_001045685.1 CDS Rsph17029_3833 NC_009050.1 962411 963595 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rsp:RSP_3104 putative glutathione-dependent formaldehyde dehydrogenase; alcohol dehydrogenase 962411..963595 Rhodobacter sphaeroides ATCC 17029 4898267 YP_001045686.1 CDS Rsph17029_3834 NC_009050.1 963624 965810 R KEGG: rsp:RSP_3105 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(963624..965810) Rhodobacter sphaeroides ATCC 17029 4898646 YP_001045687.1 CDS Rsph17029_3835 NC_009050.1 965963 966925 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rsp:RSP_3106 cation efflux transporter, CDF family; cation diffusion facilitator family transporter complement(965963..966925) Rhodobacter sphaeroides ATCC 17029 4898647 YP_001045688.1 CDS Rsph17029_3836 NC_009050.1 966933 967205 R PFAM: protein of unknown function DUF156; KEGG: rsp:RSP_3107 hypothetical protein; hypothetical protein complement(966933..967205) Rhodobacter sphaeroides ATCC 17029 4898648 YP_001045689.1 CDS Rsph17029_3837 NC_009050.1 967660 969348 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3108 putative methyl accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(967660..969348) Rhodobacter sphaeroides ATCC 17029 4899063 YP_001045690.1 CDS Rsph17029_3838 NC_009050.1 969501 969965 R PFAM: regulatory protein, MarR; KEGG: rsp:RSP_3109 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(969501..969965) Rhodobacter sphaeroides ATCC 17029 4899064 YP_001045691.1 CDS Rsph17029_3839 NC_009050.1 970028 970708 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_3110 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 970028..970708 Rhodobacter sphaeroides ATCC 17029 4899065 YP_001045692.1 CDS Rsph17029_3840 NC_009050.1 970740 971438 D PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rsp:RSP_3111 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 970740..971438 Rhodobacter sphaeroides ATCC 17029 4898106 YP_001045693.1 CDS Rsph17029_3841 NC_009050.1 971449 971925 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: rsp:RSP_3112 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 971449..971925 Rhodobacter sphaeroides ATCC 17029 4898107 YP_001045694.1 CDS Rsph17029_3842 NC_009050.1 972051 973361 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(972051..973361) Rhodobacter sphaeroides ATCC 17029 4898108 YP_001045695.1 CDS Rsph17029_3843 NC_009050.1 973842 974921 R KEGG: rsp:RSP_3114 hypothetical protein; hypothetical protein complement(973842..974921) Rhodobacter sphaeroides ATCC 17029 4898864 YP_001045696.1 CDS Rsph17029_3844 NC_009050.1 975051 975305 R PFAM: Transglycosylase-associated protein; KEGG: rsp:RSP_3115 hypothetical protein; transglycosylase-associated protein complement(975051..975305) Rhodobacter sphaeroides ATCC 17029 4898865 YP_001045697.1 CDS Rsph17029_3845 NC_009050.1 975363 976583 R PFAM: protein of unknown function UPF0118; KEGG: rsp:RSP_3116 conserved hypothetical membrane/transport protein; hypothetical protein complement(975363..976583) Rhodobacter sphaeroides ATCC 17029 4898574 YP_001045698.1 CDS Rsph17029_3846 NC_009050.1 976979 977260 R hypothetical protein complement(976979..977260) Rhodobacter sphaeroides ATCC 17029 4898885 YP_001045699.1 CDS Rsph17029_3847 NC_009050.1 977308 977991 D KEGG: rsp:RSP_3117 hypothetical protein; hypothetical protein 977308..977991 Rhodobacter sphaeroides ATCC 17029 4898576 YP_001045700.1 CDS Rsph17029_3848 NC_009050.1 978064 979473 R KEGG: rsp:RSP_3118 hypothetical protein; hypothetical protein complement(978064..979473) Rhodobacter sphaeroides ATCC 17029 4898978 YP_001045701.1 CDS Rsph17029_3849 NC_009050.1 979501 980076 R PFAM: protein of unknown function DUF1234; KEGG: rsp:RSP_3119 conserved hypothetical protein / putative esterase; hypothetical protein complement(979501..980076) Rhodobacter sphaeroides ATCC 17029 4898979 YP_001045702.1 CDS Rsph17029_3850 NC_009050.1 980544 980993 R PFAM: DoxX family protein; KEGG: rsp:RSP_3120 hypothetical protein; DoxX family protein complement(980544..980993) Rhodobacter sphaeroides ATCC 17029 4898980 YP_001045703.1 CDS Rsph17029_3851 NC_009050.1 981076 981381 R KEGG: rsp:RSP_6238 hypothetical protein; hypothetical protein complement(981076..981381) Rhodobacter sphaeroides ATCC 17029 4898565 YP_001045704.1 CDS Rsph17029_3852 NC_009050.1 981500 982474 R KEGG: rsp:RSP_3122 putative glutathione S-transferase; putative glutathione S-transferase complement(981500..982474) Rhodobacter sphaeroides ATCC 17029 4898566 YP_001045705.1 CDS Rsph17029_3853 NC_009050.1 982485 983315 R PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: rsp:RSP_3123 hypothetical protein; extradiol ring-cleavage dioxygenase III subunit B complement(982485..983315) Rhodobacter sphaeroides ATCC 17029 4898567 YP_001045706.1 CDS Rsph17029_3854 NC_009050.1 983583 984479 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3124 transcriptional regulator, LysR family; LysR family transcriptional regulator 983583..984479 Rhodobacter sphaeroides ATCC 17029 4899000 YP_001045707.1 CDS Rsph17029_3855 NC_009050.1 984533 984865 D SMART: regulatory protein, ArsR; KEGG: rsp:RSP_3125 transcriptional regulator, ArsR familyy; regulatory protein ArsR 984533..984865 Rhodobacter sphaeroides ATCC 17029 4899001 YP_001045708.1 CDS Rsph17029_3856 NC_009050.1 984901 985953 D TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: rsp:RSP_3126 arsenite efflux pump, ACR3 family; arsenical-resistance protein 984901..985953 Rhodobacter sphaeroides ATCC 17029 4899002 YP_001045709.1 CDS Rsph17029_3857 NC_009050.1 985950 986381 D TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rsp:RSP_3127 putative arsenate reductase; arsenate reductase 985950..986381 Rhodobacter sphaeroides ATCC 17029 4898242 YP_001045710.1 CDS Rsph17029_3859 NC_009050.1 986684 987631 R KEGG: rsp:RSP_3128 hypothetical protein; hypothetical protein complement(986684..987631) Rhodobacter sphaeroides ATCC 17029 4898886 YP_001045711.1 CDS Rsph17029_3860 NC_009050.1 987628 988524 R hypothetical protein complement(987628..988524) Rhodobacter sphaeroides ATCC 17029 4898244 YP_001045712.1 CDS Rsph17029_3861 NC_009050.1 988802 989533 D hypothetical protein 988802..989533 Rhodobacter sphaeroides ATCC 17029 4898802 YP_001045713.1 CDS Rsph17029_3862 NC_009050.1 989593 990051 D hypothetical protein 989593..990051 Rhodobacter sphaeroides ATCC 17029 4898803 YP_001045714.1 CDS Rsph17029_3863 NC_009050.1 990065 991576 D PFAM: Forkhead-associated protein; KEGG: sco:SCO6079 hypothetical protein; FHA domain-containing protein 990065..991576 Rhodobacter sphaeroides ATCC 17029 4898804 YP_001045715.1 CDS Rsph17029_3864 NC_009050.1 991598 992176 D KEGG: jan:Jann_1605 FHA domain containing protein; hypothetical protein 991598..992176 Rhodobacter sphaeroides ATCC 17029 4898649 YP_001045716.1 CDS Rsph17029_3865 NC_009050.1 992184 993311 D PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: jan:Jann_1606 protein serine/threonine phosphatases; protein phosphatase 2C domain-containing protein 992184..993311 Rhodobacter sphaeroides ATCC 17029 4898650 YP_001045717.1 CDS Rsph17029_3866 NC_009050.1 993311 994432 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3129 serine/threonine protein kinase; protein kinase 993311..994432 Rhodobacter sphaeroides ATCC 17029 4898997 YP_001045718.1 CDS Rsph17029_3867 NC_009050.1 994429 995643 D PFAM: Forkhead-associated protein; peptidase S1 and S6, chymotrypsin/Hap; KEGG: rsp:RSP_3130 putative serine protease; forkhead-associated protein 994429..995643 Rhodobacter sphaeroides ATCC 17029 4898998 YP_001045719.1 CDS Rsph17029_3868 NC_009050.1 995640 996359 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3131 ABC (antimicrobial peptide) transporter, ATPase subunit; ABC transporter 995640..996359 Rhodobacter sphaeroides ATCC 17029 4898999 YP_001045720.1 CDS Rsph17029_3869 NC_009050.1 996359 997549 D KEGG: rsp:RSP_3132 putative membrane protein; hypothetical protein 996359..997549 Rhodobacter sphaeroides ATCC 17029 4898523 YP_001045721.1 CDS Rsph17029_3870 NC_009050.1 997542 999158 D PFAM: protein of unknown function DUF323; KEGG: rsp:RSP_3133 hypothetical protein; hypothetical protein 997542..999158 Rhodobacter sphaeroides ATCC 17029 4898524 YP_001045722.1 CDS Rsph17029_3871 NC_009050.1 999177 999440 D KEGG: rsp:RSP_6164 hypothetical protein; hypothetical protein 999177..999440 Rhodobacter sphaeroides ATCC 17029 4898525 YP_001045723.1 CDS Rsph17029_3872 NC_009050.1 999457 1000731 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rsp:RSP_3134 serine/threonine protein kinase; protein kinase 999457..1000731 Rhodobacter sphaeroides ATCC 17029 4898875 YP_001045724.1 CDS Rsph17029_3873 NC_009050.1 1000728 1002623 D KEGG: rsp:RSP_3135 PpkA-related protein; PpkA-related protein 1000728..1002623 Rhodobacter sphaeroides ATCC 17029 4898876 YP_001045725.1 CDS Rsph17029_3874 NC_009050.1 1003056 1005419 R PFAM: Carbohydrate-binding, CenC domain protein domain protein; protein of unknown function DUF1593; KEGG: rsp:RSP_3136 hypothetical protein; hypothetical protein complement(1003056..1005419) Rhodobacter sphaeroides ATCC 17029 4898877 YP_001045726.1 CDS Rsph17029_3875 NC_009050.1 1006044 1007648 R PFAM: FAD dependent oxidoreductase; KEGG: rsp:RSP_3137 hypothetical protein; hypothetical protein complement(1006044..1007648) Rhodobacter sphaeroides ATCC 17029 4898460 YP_001045727.1 CDS Rsph17029_3876 NC_009050.1 1008307 1009146 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rsp:RSP_3138 Smp-30/Cgr1 family protein; SMP-30/gluconolaconase/LRE domain-containing protein 1008307..1009146 Rhodobacter sphaeroides ATCC 17029 4898461 YP_001045728.1 CDS Rsph17029_3877 NC_009050.1 1009745 1010326 D KEGG: rsp:RSP_3140 hypothetical protein; hypothetical protein 1009745..1010326 Rhodobacter sphaeroides ATCC 17029 4898462 YP_001045729.1 CDS Rsph17029_3878 NC_009050.1 1010977 1011285 D PFAM: protein of unknown function DUF485; KEGG: rsp:RSP_3141 hypothetical protein; hypothetical protein 1010977..1011285 Rhodobacter sphaeroides ATCC 17029 4898426 YP_001045730.1 CDS actP NC_009050.1 1011282 1013012 D member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 1011282..1013012 Rhodobacter sphaeroides ATCC 17029 4898427 YP_001045731.1 CDS Rsph17029_3880 NC_009050.1 1013076 1013417 R PFAM: NIPSNAP family containing protein; KEGG: rsp:RSP_3143 hypothetical protein; NIPSNAP family protein complement(1013076..1013417) Rhodobacter sphaeroides ATCC 17029 4898428 YP_001045732.1 CDS Rsph17029_3881 NC_009050.1 1013427 1014425 R PFAM: conserved hypothetical protein 698; KEGG: rsp:RSP_3144 hypothetical protein; hypothetical protein complement(1013427..1014425) Rhodobacter sphaeroides ATCC 17029 4898511 YP_001045733.1 CDS Rsph17029_3882 NC_009050.1 1014422 1015102 R PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: rsp:RSP_3145 putative tartrate dehydratase beta subunit; Fe-S type hydro-lyases tartrate/fumarate beta region complement(1014422..1015102) Rhodobacter sphaeroides ATCC 17029 4898512 YP_001045734.1 CDS Rsph17029_3883 NC_009050.1 1015066 1016028 R TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: rsp:RSP_3146 putative tartrate dehydratase alpha subunit; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha complement(1015066..1016028) Rhodobacter sphaeroides ATCC 17029 4898513 YP_001045735.1 CDS Rsph17029_3884 NC_009050.1 1016025 1017788 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rsp:RSP_3147 putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit; L-aspartate oxidase complement(1016025..1017788) Rhodobacter sphaeroides ATCC 17029 4898774 YP_001045736.1 CDS Rsph17029_3885 NC_009050.1 1017790 1018134 R PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rsp:RSP_3148 putative succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase, cytochrome b subunit complement(1017790..1018134) Rhodobacter sphaeroides ATCC 17029 4898775 YP_001045737.1 CDS Rsph17029_3886 NC_009050.1 1018131 1018466 R KEGG: rsp:RSP_3149 putative succinate dehydrogenase membrane anchor; putative succinate dehydrogenase membrane anchor complement(1018131..1018466) Rhodobacter sphaeroides ATCC 17029 4898892 YP_001045738.1 CDS Rsph17029_3887 NC_009050.1 1018470 1019198 R KEGG: rsp:RSP_3150 succinate dehydrogenase/fumarate reductase Fe-S protein subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(1018470..1019198) Rhodobacter sphaeroides ATCC 17029 4898893 YP_001045739.1 CDS Rsph17029_3888 NC_009050.1 1019476 1020468 R KEGG: rsp:RSP_3151 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein complement(1019476..1020468) Rhodobacter sphaeroides ATCC 17029 4898894 YP_001045740.1 CDS Rsph17029_3889 NC_009050.1 1020468 1021475 R KEGG: rsp:RSP_3152 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein; nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein complement(1020468..1021475) Rhodobacter sphaeroides ATCC 17029 4898333 YP_001045741.1 CDS Rsph17029_3890 NC_009050.1 1021624 1022535 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3153 ABC nitrate/sulfonate/bicarbonate transporter family, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1021624..1022535) Rhodobacter sphaeroides ATCC 17029 4898334 YP_001045742.1 CDS Rsph17029_3891 NC_009050.1 1022528 1023304 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3154 ABC nitrate/sulfonate/bicarbonate transporter family, ATPase subunit; ABC transporter complement(1022528..1023304) Rhodobacter sphaeroides ATCC 17029 4898335 YP_001045743.1 CDS Rsph17029_3892 NC_009050.1 1023355 1025007 R PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_3155 thiamine pyrophosphate-requiring enzyme; thiamine pyrophosphate binding domain-containing protein complement(1023355..1025007) Rhodobacter sphaeroides ATCC 17029 4899180 YP_001045744.1 CDS Rsph17029_3893 NC_009050.1 1025189 1026085 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_6165 transcriptional regulator, LysR family; LysR family transcriptional regulator 1025189..1026085 Rhodobacter sphaeroides ATCC 17029 4899181 YP_001045745.1 CDS Rsph17029_3894 NC_009050.1 1026098 1026859 D PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_6166 hypothetical membrane protein; hypothetical protein 1026098..1026859 Rhodobacter sphaeroides ATCC 17029 4899182 YP_001045746.1 CDS Rsph17029_3895 NC_009050.1 1026982 1028106 R PFAM: ABC-2 type transporter; KEGG: rsp:RSP_3157 ABC transporter, inner membrane subunit; ABC-2 type transporter complement(1026982..1028106) Rhodobacter sphaeroides ATCC 17029 4898851 YP_001045747.1 CDS Rsph17029_3896 NC_009050.1 1028108 1030813 R PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rsp:RSP_3159 ABC transporter, 2 fused ATPase and 1 inner membrane subunits; ABC transporter complement(1028108..1030813) Rhodobacter sphaeroides ATCC 17029 4898852 YP_001045748.1 CDS Rsph17029_3897 NC_009050.1 1030818 1031813 R PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3160 membrane fusion protein, HlyD family; secretion protein HlyD family protein complement(1030818..1031813) Rhodobacter sphaeroides ATCC 17029 4898853 YP_001045749.1 CDS Rsph17029_3898 NC_009050.1 1032046 1034661 R PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: rsp:RSP_3161 hypothetical protein; hypothetical protein complement(1032046..1034661) Rhodobacter sphaeroides ATCC 17029 4899146 YP_001045750.1 CDS Rsph17029_3900 NC_009050.1 1035794 1036381 R KEGG: rsp:RSP_3162 hypothetical protein; hypothetical protein complement(1035794..1036381) Rhodobacter sphaeroides ATCC 17029 4898904 YP_001045751.1 CDS Rsph17029_3901 NC_009050.1 1036389 1038524 R PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3163 probable oxidoreductase; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding complement(1036389..1038524) Rhodobacter sphaeroides ATCC 17029 4899148 YP_001045752.1 CDS Rsph17029_3902 NC_009050.1 1038528 1038986 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_3164 ferredoxin like protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(1038528..1038986) Rhodobacter sphaeroides ATCC 17029 4899114 YP_001045753.1 CDS Rsph17029_3903 NC_009050.1 1039072 1039812 R PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3165 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(1039072..1039812) Rhodobacter sphaeroides ATCC 17029 4899115 YP_001045754.1 CDS Rsph17029_3904 NC_009050.1 1039812 1040657 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3166 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1039812..1040657) Rhodobacter sphaeroides ATCC 17029 4899116 YP_001045755.1 CDS Rsph17029_3905 NC_009050.1 1040654 1041469 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3167 ABC transporter, ATPase subunit; ABC transporter complement(1040654..1041469) Rhodobacter sphaeroides ATCC 17029 4898736 YP_001045756.1 CDS Rsph17029_3906 NC_009050.1 1041469 1042500 R PFAM: WD-40 repeat protein; KEGG: rsp:RSP_3168 ABC transporter, periplasmic binding protein; WD-40 repeat-containing protein complement(1041469..1042500) Rhodobacter sphaeroides ATCC 17029 4898737 YP_001045757.1 CDS Rsph17029_3907 NC_009050.1 1042722 1043420 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rsp:RSP_3169 FAA-hydrolase-family protein; fumarylacetoacetate (FAA) hydrolase 1042722..1043420 Rhodobacter sphaeroides ATCC 17029 4899038 YP_001045758.1 CDS Rsph17029_3908 NC_009050.1 1043426 1044037 D PFAM: Dimethylmenaquinone methyltransferase; KEGG: rsp:RSP_3170 demethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 1043426..1044037 Rhodobacter sphaeroides ATCC 17029 4899039 YP_001045759.1 CDS Rsph17029_3909 NC_009050.1 1044038 1044904 D PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rsp:RSP_3171 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 1044038..1044904 Rhodobacter sphaeroides ATCC 17029 4899040 YP_001045760.1 CDS Rsph17029_3910 NC_009050.1 1044904 1045737 D PFAM: protein of unknown function DUF81; KEGG: rsp:RSP_3172 hypothetical protein; hypothetical protein 1044904..1045737 Rhodobacter sphaeroides ATCC 17029 4898981 YP_001045761.1 CDS Rsph17029_3911 NC_009050.1 1045760 1047259 R PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: rsp:RSP_3174 nucleoside transporter, NCS1 family; cytosine/purines uracil thiamine allantoin permease complement(1045760..1047259) Rhodobacter sphaeroides ATCC 17029 4898982 YP_001045762.1 CDS Rsph17029_3912 NC_009050.1 1047492 1047917 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3175 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1047492..1047917) Rhodobacter sphaeroides ATCC 17029 4898983 YP_001045763.1 CDS Rsph17029_3913 NC_009050.1 1048091 1048879 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_3176 enoyl-(acyl-carrier protein) reductase (NADH); short-chain dehydrogenase/reductase SDR complement(1048091..1048879) Rhodobacter sphaeroides ATCC 17029 4898206 YP_001045764.1 CDS Rsph17029_3914 NC_009050.1 1048890 1050119 R PFAM: beta-ketoacyl synthase; KEGG: rsp:RSP_3177 3-oxoacyl-(acyl-carrier-protein) synthase; beta-ketoacyl synthase complement(1048890..1050119) Rhodobacter sphaeroides ATCC 17029 4898207 YP_001045765.1 CDS Rsph17029_3915 NC_009050.1 1050139 1050648 R catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase complement(1050139..1050648) Rhodobacter sphaeroides ATCC 17029 4898208 YP_001045766.1 CDS Rsph17029_3916 NC_009050.1 1050798 1051238 D PFAM: ferric-uptake regulator; KEGG: rsp:RSP_3179 probable ferric-uptake regulator; ferric uptake regulator family protein 1050798..1051238 Rhodobacter sphaeroides ATCC 17029 4898866 YP_001045767.1 CDS Rsph17029_3917 NC_009050.1 1051369 1052181 D PFAM: transglutaminase domain protein; KEGG: rsp:RSP_3180 transglutaminase-like enzyme; transglutaminase domain-containing protein 1051369..1052181 Rhodobacter sphaeroides ATCC 17029 4898867 YP_001045768.1 CDS Rsph17029_3918 NC_009050.1 1052185 1053366 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rsp:RSP_3181 putative fatty-acyl-CoA racemase; CoA-transferase family III; L-carnitine dehydratase/bile acid-inducible protein F complement(1052185..1053366) Rhodobacter sphaeroides ATCC 17029 4898868 YP_001045769.1 CDS Rsph17029_3919 NC_009050.1 1053363 1054496 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rsp:RSP_3182 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1053363..1054496) Rhodobacter sphaeroides ATCC 17029 4898943 YP_001045770.1 CDS Rsph17029_3920 NC_009050.1 1054493 1055254 R PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rsp:RSP_3183 3-hydroxyacyl-CoA dehydrogenase type II; short-chain dehydrogenase/reductase SDR complement(1054493..1055254) Rhodobacter sphaeroides ATCC 17029 4898944 YP_001045771.1 CDS Rsph17029_3921 NC_009050.1 1055254 1056414 R KEGG: rsp:RSP_3184 putative thiolase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(1055254..1056414) Rhodobacter sphaeroides ATCC 17029 4898945 YP_001045772.1 CDS Rsph17029_3922 NC_009050.1 1056575 1057900 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(1056575..1057900) Rhodobacter sphaeroides ATCC 17029 4898887 YP_001045773.1 CDS Rsph17029_3923 NC_009050.1 1058130 1058807 R KEGG: rsp:RSP_3186 hypothetical protein; hypothetical protein complement(1058130..1058807) Rhodobacter sphaeroides ATCC 17029 4898888 YP_001045774.1 CDS Rsph17029_3924 NC_009050.1 1059360 1059770 D KEGG: rsp:RSP_6237 hypothetical protein; hypothetical protein 1059360..1059770 Rhodobacter sphaeroides ATCC 17029 4898889 YP_001045775.1 CDS mdoD NC_009050.1 1059859 1061442 R involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D complement(1059859..1061442) Rhodobacter sphaeroides ATCC 17029 4898793 YP_001045776.1 CDS Rsph17029_3926 NC_009050.1 1061708 1062808 R PFAM: ApbE family lipoprotein; KEGG: rsp:RSP_3188 ApbE family protein; ApbE family lipoprotein complement(1061708..1062808) Rhodobacter sphaeroides ATCC 17029 4898794 YP_001045777.1 CDS Rsph17029_3927 NC_009050.1 1062796 1063281 R PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: rsp:RSP_3188 ApbE family protein; sigma E positive regulator RseC/MucC complement(1062796..1063281) Rhodobacter sphaeroides ATCC 17029 4898795 YP_001045778.1 CDS Rsph17029_3928 NC_009050.1 1063286 1063483 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rsp:RSP_3189 4Fe-4S ferredoxin; 4Fe-4S ferredoxin complement(1063286..1063483) Rhodobacter sphaeroides ATCC 17029 4898442 YP_001045779.1 CDS Rsph17029_3929 NC_009050.1 1063534 1063821 R PFAM: ferredoxin; KEGG: rsp:RSP_3190 2Fe-2S ferredoxin; ferredoxin complement(1063534..1063821) Rhodobacter sphaeroides ATCC 17029 4898443 YP_001045780.1 CDS Rsph17029_3930 NC_009050.1 1063851 1065116 R PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: rsp:RSP_3191 flavodoxin; beta-lactamase domain-containing protein complement(1063851..1065116) Rhodobacter sphaeroides ATCC 17029 4898444 YP_001045781.1 CDS Rsph17029_3931 NC_009050.1 1065632 1066213 D TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: rsp:RSP_3192 predicted NADH-ubiquinone oxidoreductase; subunit RnfA; Na(+)-translocating NADH-quinone reductase subunit E 1065632..1066213 Rhodobacter sphaeroides ATCC 17029 4898487 YP_001045782.1 CDS Rsph17029_3932 NC_009050.1 1066233 1066799 D TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: rsp:RSP_3193 electron transport complex protein RnfB; RnfABCDGE type electron transport complex subunit B 1066233..1066799 Rhodobacter sphaeroides ATCC 17029 4898488 YP_001045783.1 CDS Rsph17029_3933 NC_009050.1 1066796 1068349 D TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rsp:RSP_3194 4Fe-4S ferredoxin, RnfC; RnfABCDGE type electron transport complex subunit C 1066796..1068349 Rhodobacter sphaeroides ATCC 17029 4898489 YP_001045784.1 CDS Rsph17029_3934 NC_009050.1 1068346 1069434 D TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: rsp:RSP_3195 RnfD protein; electron transport complex, RnfABCDGE type, D subunit 1068346..1069434 Rhodobacter sphaeroides ATCC 17029 4898901 YP_001045785.1 CDS Rsph17029_3935 NC_009050.1 1069431 1070090 D TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: rsp:RSP_3196 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 1069431..1070090 Rhodobacter sphaeroides ATCC 17029 4898902 YP_001045786.1 CDS Rsph17029_3936 NC_009050.1 1070107 1070841 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1070107..1070841 Rhodobacter sphaeroides ATCC 17029 4898903 YP_001045787.1 CDS Rsph17029_3937 NC_009050.1 1070838 1071095 D PFAM: protein of unknown function UPF0125; KEGG: rsp:RSP_3198 probable RnfH protein; hypothetical protein 1070838..1071095 Rhodobacter sphaeroides ATCC 17029 4898239 YP_001045788.1 CDS Rsph17029_3938 NC_009050.1 1071145 1072167 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsp:RSP_3199 hypothetical protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1071145..1072167 Rhodobacter sphaeroides ATCC 17029 4898240 YP_001045789.1 CDS Rsph17029_3939 NC_009050.1 1072308 1073552 D KEGG: rsp:RSP_3200 molecular chaperone, DnaK; molecular chaperone, DnaK 1072308..1073552 Rhodobacter sphaeroides ATCC 17029 4898241 YP_001045790.1 CDS Rsph17029_3940 NC_009050.1 1073702 1074721 R PFAM: aldo/keto reductase; KEGG: rsp:RSP_3201 putative oxidoreductase; aldo/keto reductase complement(1073702..1074721) Rhodobacter sphaeroides ATCC 17029 4898327 YP_001045791.1 CDS Rsph17029_3941 NC_009050.1 1074890 1075801 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; KEGG: rsp:RSP_3202 transcriptional regulator, AraC family; AraC-like transcriptional regulator 1074890..1075801 Rhodobacter sphaeroides ATCC 17029 4898328 YP_001045792.1 CDS Rsph17029_3942 NC_009050.1 1076056 1077066 D PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: rsp:RSP_3203 transcriptional regulator, AraC family; AraC family transcriptional regulator 1076056..1077066 Rhodobacter sphaeroides ATCC 17029 4898329 YP_001045793.1 CDS Rsph17029_3943 NC_009050.1 1077230 1077751 D PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rsp:RSP_3204 putative oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1077230..1077751 Rhodobacter sphaeroides ATCC 17029 4899120 YP_001045794.1 CDS Rsph17029_3944 NC_009050.1 1077748 1078731 D PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rsp:RSP_3205 putative oxidoreductase subunit; molybdopterin dehydrogenase 1077748..1078731 Rhodobacter sphaeroides ATCC 17029 4899121 YP_001045795.1 CDS Rsph17029_3945 NC_009050.1 1078728 1080947 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rsp:RSP_3206 putative xanthine dehydrogenase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1078728..1080947 Rhodobacter sphaeroides ATCC 17029 4899122 YP_001045796.1 CDS Rsph17029_3946 NC_009050.1 1081212 1081982 D KEGG: rsp:RSP_6168 ABC cobalt transporter, periplasmic binding protein CbiN; ABC cobalt transporter, periplasmic binding protein CbiN 1081212..1081982 Rhodobacter sphaeroides ATCC 17029 4898412 YP_001045797.1 CDS Rsph17029_3947 NC_009050.1 1081984 1082601 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1081984..1082601 Rhodobacter sphaeroides ATCC 17029 4898413 YP_001045798.1 CDS Rsph17029_3948 NC_009050.1 1082601 1083194 D KEGG: rsp:RSP_3208 putative CbiL protein; putative CbiL protein 1082601..1083194 Rhodobacter sphaeroides ATCC 17029 4898414 YP_001045799.1 CDS Rsph17029_3949 NC_009050.1 1083191 1083901 D TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rsp:RSP_3209 ABC cobalt transporter, inner membrane subunit, CbiQ; cobalt ABC transporter, inner membrane subunit CbiQ 1083191..1083901 Rhodobacter sphaeroides ATCC 17029 4899076 YP_001045800.1 CDS Rsph17029_3950 NC_009050.1 1083898 1084662 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3211 ABC cobalt transporter, ATPase subunit, CbiO; ABC transporter 1083898..1084662 Rhodobacter sphaeroides ATCC 17029 4899077 YP_001045801.1 CDS Rsph17029_3951 NC_009050.1 1084656 1085663 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rsp:RSP_3210 quinol oxidase subunit II QxtB; cytochrome d ubiquinol oxidase, subunit II complement(1084656..1085663) Rhodobacter sphaeroides ATCC 17029 4899078 YP_001045802.1 CDS Rsph17029_3952 NC_009050.1 1085665 1087062 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rsp:RSP_3212 quinol oxidase subunit I QxtA; cytochrome bd ubiquinol oxidase, subunit I complement(1085665..1087062) Rhodobacter sphaeroides ATCC 17029 4899126 YP_001045803.1 CDS Rsph17029_3953 NC_009050.1 1087429 1088643 R KEGG: rsp:RSP_3213 hypothetical protein; hypothetical protein complement(1087429..1088643) Rhodobacter sphaeroides ATCC 17029 4899127 YP_001045804.1 CDS Rsph17029_3954 NC_009050.1 1088884 1092264 R KEGG: rsp:RSP_3215 hypothetical protein; hypothetical protein complement(1088884..1092264) Rhodobacter sphaeroides ATCC 17029 4899128 YP_001045805.1 CDS Rsph17029_3955 NC_009050.1 1092264 1093520 R PFAM: metallophosphoesterase; KEGG: rsp:RSP_3216 putative DNA repair exonuclease; metallophosphoesterase complement(1092264..1093520) Rhodobacter sphaeroides ATCC 17029 4898768 YP_001045806.1 CDS Rsph17029_3956 NC_009050.1 1093866 1094558 D TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: rsp:RSP_3218 putative oxidoreductase NAD protein; cob(II)yrinic acid a,c-diamide reductase 1093866..1094558 Rhodobacter sphaeroides ATCC 17029 4898769 YP_001045807.1 CDS Rsph17029_3957 NC_009050.1 1094713 1094904 R KEGG: rsp:RSP_6169 hypothetical protein; hypothetical protein complement(1094713..1094904) Rhodobacter sphaeroides ATCC 17029 4898770 YP_001045808.1 CDS Rsph17029_3958 NC_009050.1 1094989 1097088 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Cache domain protein; KEGG: rsp:RSP_3217 cache sensor protein; multi-sensor signal transduction histidine kinase complement(1094989..1097088) Rhodobacter sphaeroides ATCC 17029 4898417 YP_001045809.1 CDS Rsph17029_3959 NC_009050.1 1097717 1098664 D PFAM: transport system permease protein; KEGG: rsp:RSP_3220 ABC ferric siderophore transporter, inner membrane subunit; transport system permease protein 1097717..1098664 Rhodobacter sphaeroides ATCC 17029 4898418 YP_001045810.1 CDS Rsph17029_3960 NC_009050.1 1098657 1099601 D PFAM: transport system permease protein; KEGG: rsp:RSP_3221 ABC ferric siderophore transporter, inner membrane subunit; transport system permease protein 1098657..1099601 Rhodobacter sphaeroides ATCC 17029 4898419 YP_001045811.1 CDS Rsph17029_3961 NC_009050.1 1099598 1100356 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3222 ABC ferric siderophore transporter, ATPase subunit; ABC transporter 1099598..1100356 Rhodobacter sphaeroides ATCC 17029 4898753 YP_001045812.1 CDS Rsph17029_3962 NC_009050.1 1100467 1102563 D PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: atc:AGR_L_1858 outer membrane protein irgA precursor; TonB-dependent receptor 1100467..1102563 Rhodobacter sphaeroides ATCC 17029 4898754 YP_001045813.1 CDS Rsph17029_3963 NC_009050.1 1102670 1104286 D PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rsp:RSP_3225 periplasmic sensor signal transduction histidine kinase; signal transduction histidine kinase 1102670..1104286 Rhodobacter sphaeroides ATCC 17029 4898755 YP_001045814.1 CDS Rsph17029_3964 NC_009050.1 1104595 1105287 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 1104595..1105287 Rhodobacter sphaeroides ATCC 17029 4898454 YP_001045815.1 CDS Rsph17029_3965 NC_009050.1 1105382 1106419 D TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: rsp:RSP_3227 lysine 2,3-aminomutase; lysine 2,3-aminomutase YodO family protein 1105382..1106419 Rhodobacter sphaeroides ATCC 17029 4898455 YP_001045816.1 CDS Rsph17029_3966 NC_009050.1 1106475 1106870 D PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_3228 predicted mannose-6-phosphate isomerase; cupin 1106475..1106870 Rhodobacter sphaeroides ATCC 17029 4898456 YP_001045817.1 CDS Rsph17029_3967 NC_009050.1 1106905 1108146 R TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rsp:RSP_3229 membrane-bound lytic murein transglycosylase B; lytic murein transglycosylase complement(1106905..1108146) Rhodobacter sphaeroides ATCC 17029 4898259 YP_001045818.1 CDS Rsph17029_3968 NC_009050.1 1108488 1108697 R KEGG: rsp:RSP_3230 hypothetical protein; hypothetical protein complement(1108488..1108697) Rhodobacter sphaeroides ATCC 17029 4898260 YP_001045819.1 CDS Rsph17029_3969 NC_009050.1 1108929 1110527 D PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3231 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein 1108929..1110527 Rhodobacter sphaeroides ATCC 17029 4898261 YP_001045820.1 CDS Rsph17029_3970 NC_009050.1 1110595 1111602 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3232 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1110595..1111602 Rhodobacter sphaeroides ATCC 17029 4898915 YP_001045821.1 CDS Rsph17029_3971 NC_009050.1 1111610 1112512 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3233 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 1111610..1112512 Rhodobacter sphaeroides ATCC 17029 4898916 YP_001045822.1 CDS Rsph17029_3972 NC_009050.1 1112517 1113365 D PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3235 ABC peptide transporter, ATPase subunit; ABC transporter 1112517..1113365 Rhodobacter sphaeroides ATCC 17029 4898917 YP_001045823.1 CDS Rsph17029_3973 NC_009050.1 1113365 1114213 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3236 ABC peptide transporter, ATPase subunit; ABC transporter 1113365..1114213 Rhodobacter sphaeroides ATCC 17029 4898637 YP_001045824.1 CDS Rsph17029_3974 NC_009050.1 1114367 1114762 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rsp:RSP_3237 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1114367..1114762 Rhodobacter sphaeroides ATCC 17029 4898638 YP_001045825.1 CDS Rsph17029_3975 NC_009050.1 1114832 1116235 D KEGG: rsp:RSP_3238 hypothetical protein; hypothetical protein 1114832..1116235 Rhodobacter sphaeroides ATCC 17029 4898639 YP_001045826.1 CDS Rsph17029_3976 NC_009050.1 1116535 1117929 R PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rsp:RSP_3240 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1116535..1117929) Rhodobacter sphaeroides ATCC 17029 4898813 YP_001045827.1 CDS Rsph17029_3977 NC_009050.1 1117926 1118600 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3241 two-component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1117926..1118600) Rhodobacter sphaeroides ATCC 17029 4898814 YP_001045828.1 CDS Rsph17029_3978 NC_009050.1 1118845 1120296 D TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rsp:RSP_3242 putative trypsin-like serine protease; protease Do 1118845..1120296 Rhodobacter sphaeroides ATCC 17029 4898815 YP_001045829.1 CDS Rsph17029_3979 NC_009050.1 1120523 1121215 D hypothetical protein 1120523..1121215 Rhodobacter sphaeroides ATCC 17029 4898184 YP_001045830.1 CDS Rsph17029_3980 NC_009050.1 1121388 1122623 D PFAM: major facilitator superfamily MFS_1; KEGG: rsp:RSP_3245 possible transporter, major facilitator superfamily (MFS); major facilitator transporter 1121388..1122623 Rhodobacter sphaeroides ATCC 17029 4898185 YP_001045831.1 CDS Rsph17029_3981 NC_009050.1 1122747 1124297 D intracellular enzymes acting on low molecular weight D-amino acid amides, esters and oligopeptides containing D-amino acids; these proteases release the N-terminal D-amino acid from a peptide, and show higher affinity for D-Ala, D-Ser or D-Thr; no preference for the stereochemistry of the second amino acid; D-aminopeptidase 1122747..1124297 Rhodobacter sphaeroides ATCC 17029 4898186 YP_001045832.1 CDS Rsph17029_3982 NC_009050.1 1124354 1125865 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3248 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein complement(1124354..1125865) Rhodobacter sphaeroides ATCC 17029 4899129 YP_001045833.1 CDS Rsph17029_3983 NC_009050.1 1125862 1127535 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3249 ABC peptide transporter, duplicated ATPase domains; ABC transporter complement(1125862..1127535) Rhodobacter sphaeroides ATCC 17029 4899130 YP_001045834.1 CDS Rsph17029_3984 NC_009050.1 1127532 1128359 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3250 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(1127532..1128359) Rhodobacter sphaeroides ATCC 17029 4899131 YP_001045835.1 CDS Rsph17029_3985 NC_009050.1 1128356 1129294 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3251 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1128356..1129294) Rhodobacter sphaeroides ATCC 17029 4898256 YP_001045836.1 CDS Rsph17029_3986 NC_009050.1 1129562 1131340 R PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3252 ABC peptide transporter, fused ATPase domains; ABC transporter related complement(1129562..1131340) Rhodobacter sphaeroides ATCC 17029 4898257 YP_001045837.1 CDS Rsph17029_3987 NC_009050.1 1131337 1132296 R PFAM: Acetamidase/Formamidase; KEGG: rsp:RSP_3253 predicted acetamidase / formamidase; acetamidase/formamidase complement(1131337..1132296) Rhodobacter sphaeroides ATCC 17029 4898258 YP_001045838.1 CDS Rsph17029_3988 NC_009050.1 1132302 1133924 R PFAM: extracellular solute-binding protein, family 5; KEGG: rsp:RSP_3255 ABC peptide transporter, periplasmic binding protein; extracellular solute-binding protein complement(1132302..1133924) Rhodobacter sphaeroides ATCC 17029 4898698 YP_001045839.1 CDS Rsph17029_3989 NC_009050.1 1133946 1134866 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3257 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1133946..1134866) Rhodobacter sphaeroides ATCC 17029 4898699 YP_001045840.1 CDS Rsph17029_3990 NC_009050.1 1134866 1135753 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3258 ABC peptide transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1134866..1135753) Rhodobacter sphaeroides ATCC 17029 4898700 YP_001045841.1 CDS Rsph17029_3991 NC_009050.1 1135731 1136330 R PFAM: ANTAR domain protein; KEGG: rsp:RSP_3259 transcription antitermination protein; response regulator receiver/ANTAR domain-containing protein complement(1135731..1136330) Rhodobacter sphaeroides ATCC 17029 4898397 YP_001045842.1 CDS Rsph17029_3992 NC_009050.1 1136327 1137388 R KEGG: rsp:RSP_3260 putative negative amidase regulator, AmiC; putative negative amidase regulator, AmiC complement(1136327..1137388) Rhodobacter sphaeroides ATCC 17029 4898398 YP_001045843.1 CDS Rsph17029_3993 NC_009050.1 1137723 1139105 D PFAM: aminotransferase class-III; KEGG: rsp:RSP_3261 hypothetical protein; aminotransferase 1137723..1139105 Rhodobacter sphaeroides ATCC 17029 4898399 YP_001045844.1 CDS Rsph17029_3994 NC_009050.1 1139109 1139540 D PFAM: thioesterase superfamily protein; KEGG: rsp:RSP_3262 putative thioesterase; thioesterase superfamily protein 1139109..1139540 Rhodobacter sphaeroides ATCC 17029 4898227 YP_001045845.1 CDS Rsph17029_3995 NC_009050.1 1139722 1140264 R PFAM: blue (type 1) copper domain protein; KEGG: rsp:RSP_3263 putative copper binding protein; blue (type1) copper domain-containing protein complement(1139722..1140264) Rhodobacter sphaeroides ATCC 17029 4898228 YP_001045846.1 CDS Rsph17029_3996 NC_009050.1 1140360 1140791 R PFAM: cytochrome c, class I; KEGG: rsp:RSP_3264 probable C-type cytochrome; cytochrome c, class I complement(1140360..1140791) Rhodobacter sphaeroides ATCC 17029 4898229 YP_001045847.1 CDS Rsph17029_3997 NC_009050.1 1140951 1141337 R KEGG: rsp:RSP_3265 hypothetical protein; hypothetical protein complement(1140951..1141337) Rhodobacter sphaeroides ATCC 17029 4898842 YP_001045848.1 CDS Rsph17029_3998 NC_009050.1 1141345 1141836 R KEGG: rsp:RSP_6171 hypothetical protein; hypothetical protein complement(1141345..1141836) Rhodobacter sphaeroides ATCC 17029 4898843 YP_001045849.1 CDS Rsph17029_3999 NC_009050.1 1141949 1142944 D PFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: rsp:RSP_3266 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-1,6-bisphosphatase 1141949..1142944 Rhodobacter sphaeroides ATCC 17029 4898844 YP_001045850.1 CDS Rsph17029_4000 NC_009050.1 1142948 1143826 D PFAM: phosphoribulokinase/uridine kinase; KEGG: rsp:RSP_3267 phosphoribulokinase; phosphoribulokinase 1142948..1143826 Rhodobacter sphaeroides ATCC 17029 4899139 YP_001045851.1 CDS Rsph17029_4001 NC_009050.1 1143907 1145880 D catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 1143907..1145880 Rhodobacter sphaeroides ATCC 17029 4899140 YP_001045852.1 CDS Rsph17029_4002 NC_009050.1 1145891 1146892 D KEGG: rsp:RSP_3269 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 1145891..1146892 Rhodobacter sphaeroides ATCC 17029 4899141 YP_001045853.1 CDS Rsph17029_4003 NC_009050.1 1146974 1148038 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1146974..1148038 Rhodobacter sphaeroides ATCC 17029 4899143 YP_001045854.1 CDS Rsph17029_4004 NC_009050.1 1148065 1149444 D catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 1148065..1149444 Rhodobacter sphaeroides ATCC 17029 4899144 YP_001045855.1 CDS Rsph17029_4005 NC_009050.1 1149521 1151302 R KEGG: rsp:RSP_3272 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(1149521..1151302) Rhodobacter sphaeroides ATCC 17029 4899145 YP_001045856.1 CDS Rsph17029_4006 NC_009050.1 1151381 1152142 R PFAM: ABC-2 type transporter; KEGG: rsp:RSP_3273 ABC multidrug/carbohydrate efflux transporter, inner membrane subunit; ABC-2 type transporter complement(1151381..1152142) Rhodobacter sphaeroides ATCC 17029 4898469 YP_001045857.1 CDS Rsph17029_4007 NC_009050.1 1152139 1153065 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3274 ABC multidrug/carbohydrate efflux transporter, ATPase subunit; ABC transporter complement(1152139..1153065) Rhodobacter sphaeroides ATCC 17029 4898470 YP_001045858.1 CDS Rsph17029_4008 NC_009050.1 1153281 1154252 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3275 MoxR-like ATPase; ATPase 1153281..1154252 Rhodobacter sphaeroides ATCC 17029 4898471 YP_001045859.1 CDS Rsph17029_4009 NC_009050.1 1154252 1155103 D KEGG: rsp:RSP_3276 hypothetical protein; hypothetical protein 1154252..1155103 Rhodobacter sphaeroides ATCC 17029 4898912 YP_001045860.1 CDS Rsph17029_4010 NC_009050.1 1155100 1155459 D KEGG: rsp:RSP_6252 hypothetical protein; hypothetical protein 1155100..1155459 Rhodobacter sphaeroides ATCC 17029 4898913 YP_001045861.1 CDS Rsph17029_4011 NC_009050.1 1155452 1156438 D PFAM: von Willebrand factor, type A; KEGG: rsp:RSP_3278 Von Willebrand domain containing protein; von Willebrand factor, type A 1155452..1156438 Rhodobacter sphaeroides ATCC 17029 4898914 YP_001045862.1 CDS Rsph17029_4012 NC_009050.1 1156435 1157370 D KEGG: rsp:RSP_3280 hypothetical protein; hypothetical protein 1156435..1157370 Rhodobacter sphaeroides ATCC 17029 4899046 YP_001045863.1 CDS Rsph17029_4013 NC_009050.1 1157370 1157966 D KEGG: rsp:RSP_3281 hypothetical protein; hypothetical protein 1157370..1157966 Rhodobacter sphaeroides ATCC 17029 4899047 YP_001045864.1 CDS Rsph17029_4014 NC_009050.1 1157960 1159120 D KEGG: rsp:RSP_3282 hypothetical protein; hypothetical protein 1157960..1159120 Rhodobacter sphaeroides ATCC 17029 4899048 YP_001045865.1 CDS Rsph17029_4015 NC_009050.1 1159184 1160188 D PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rsp:RSP_3283 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase 1159184..1160188 Rhodobacter sphaeroides ATCC 17029 4898568 YP_001045866.1 CDS Rsph17029_4016 NC_009050.1 1160350 1162194 D PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rsp:RSP_3284 acetolactate synthase; thiamine pyrophosphate enzyme, central region 1160350..1162194 Rhodobacter sphaeroides ATCC 17029 4898569 YP_001045867.1 CDS Rsph17029_4017 NC_009050.1 1162204 1163112 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3285 possible sugar phosphate isomerase/epimerase, IolE; xylose isomerase domain-containing protein 1162204..1163112 Rhodobacter sphaeroides ATCC 17029 4898570 YP_001045868.1 CDS Rsph17029_4018 NC_009050.1 1163207 1164013 D PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rsp:RSP_3286 uncharacterized enzyme involved in inositol metabolism, IolB; myo-inositol catabolism IolB domain-containing protein 1163207..1164013 Rhodobacter sphaeroides ATCC 17029 4898954 YP_001045869.1 CDS ugpC NC_009050.1 1164296 1165345 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(1164296..1165345) Rhodobacter sphaeroides ATCC 17029 4898955 YP_001045870.1 CDS Rsph17029_4020 NC_009050.1 1165346 1166194 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3288 ABC glycerol-3-phosphate transporter, inner membrane subunit UgpE; binding-protein-dependent transport system inner membrane protein complement(1165346..1166194) Rhodobacter sphaeroides ATCC 17029 4898956 YP_001045871.1 CDS Rsph17029_4021 NC_009050.1 1166202 1167083 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3289 ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA; binding-protein-dependent transport system inner membrane protein complement(1166202..1167083) Rhodobacter sphaeroides ATCC 17029 4898727 YP_001045872.1 CDS Rsph17029_4022 NC_009050.1 1167130 1168425 R PFAM: extracellular solute-binding protein, family 1; KEGG: rsp:RSP_3290 ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB; extracellular solute-binding protein complement(1167130..1168425) Rhodobacter sphaeroides ATCC 17029 4898728 YP_001045873.1 CDS Rsph17029_4023 NC_009050.1 1168625 1170310 R PFAM: Na+/Pi-cotransporter; PhoU family protein; KEGG: rsp:RSP_3291 putative Na+/phosphate symporter; Na+/Pi-cotransporter complement(1168625..1170310) Rhodobacter sphaeroides ATCC 17029 4898729 YP_001045874.1 CDS Rsph17029_4024 NC_009050.1 1170380 1171981 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rsp:RSP_3292 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(1170380..1171981) Rhodobacter sphaeroides ATCC 17029 4899060 YP_001045875.1 CDS Rsph17029_4025 NC_009050.1 1171983 1172981 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_3293 ABC branched-chain amino acid transporter, inner membrane subunit; inner-membrane translocator complement(1171983..1172981) Rhodobacter sphaeroides ATCC 17029 4899061 YP_001045876.1 CDS Rsph17029_4026 NC_009050.1 1172983 1173870 R PFAM: inner-membrane translocator; KEGG: rsp:RSP_3294 ABC branched-chain amino acid transporter, inner membrane subunit; inner-membrane translocator complement(1172983..1173870) Rhodobacter sphaeroides ATCC 17029 4899062 YP_001045877.1 CDS Rsph17029_4027 NC_009050.1 1173872 1174570 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3295 ABC branched-chain amino acid transporter, ATPase subunit; ABC transporter complement(1173872..1174570) Rhodobacter sphaeroides ATCC 17029 4898628 YP_001045878.1 CDS Rsph17029_4028 NC_009050.1 1174567 1175340 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3296 ABC branched-chain amino acid transporter, ATPase subunit; ABC transporter complement(1174567..1175340) Rhodobacter sphaeroides ATCC 17029 4898629 YP_001045879.1 CDS Rsph17029_4029 NC_009050.1 1175343 1176545 R KEGG: rsp:RSP_3297 ABC branched-chain amino acid transporter, periplasmic binding protein; ABC branched-chain amino acid transporter, periplasmic binding protein complement(1175343..1176545) Rhodobacter sphaeroides ATCC 17029 4898630 YP_001045880.1 CDS Rsph17029_4030 NC_009050.1 1176752 1177693 D PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rsp:RSP_3298 transcriptional regulator, LysR family; LysR family transcriptional regulator 1176752..1177693 Rhodobacter sphaeroides ATCC 17029 4898951 YP_001045881.1 CDS Rsph17029_4031 NC_009050.1 1177773 1179782 D KEGG: rsp:RSP_6235 hypothetical protein; hypothetical protein 1177773..1179782 Rhodobacter sphaeroides ATCC 17029 4898952 YP_001045882.1 CDS Rsph17029_4032 NC_009050.1 1179816 1180862 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rsp:RSP_3299 TRAP-T family transporter, periplasmic binding component; TRAP transporter solute receptor TAXI family protein 1179816..1180862 Rhodobacter sphaeroides ATCC 17029 4898953 YP_001045883.1 CDS Rsph17029_4033 NC_009050.1 1180999 1181754 D PFAM: protein of unknown function DUF1194; KEGG: rsp:RSP_6253 hypothetical protein; hypothetical protein 1180999..1181754 Rhodobacter sphaeroides ATCC 17029 4898373 YP_001045884.1 CDS Rsph17029_4034 NC_009050.1 1181813 1182421 D catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1181813..1182421 Rhodobacter sphaeroides ATCC 17029 4898374 YP_001045885.1 CDS Rsph17029_4035 NC_009050.1 1182581 1182946 D PFAM: response regulator receiver; KEGG: rsp:RSP_3302 chemotaxis response regulator, CheY4; response regulator receiver protein 1182581..1182946 Rhodobacter sphaeroides ATCC 17029 4898375 YP_001045886.1 CDS Rsph17029_4036 NC_009050.1 1183047 1184651 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rsp:RSP_3303 putative methyl accepting chemotaxis protein, McpG; methyl-accepting chemotaxis sensory transducer 1183047..1184651 Rhodobacter sphaeroides ATCC 17029 4898975 YP_001045887.1 CDS Rsph17029_4037 NC_009050.1 1184685 1184981 R KEGG: rsp:RSP_6236 hypothetical protein; hypothetical protein complement(1184685..1184981) Rhodobacter sphaeroides ATCC 17029 4898976 YP_001045888.1 CDS Rsph17029_4038 NC_009050.1 1185206 1186561 D PFAM: ABC-1 domain protein; KEGG: rsp:RSP_3305 putative ubiquinol-cytochrome-c reductase assembly protein; hypothetical protein 1185206..1186561 Rhodobacter sphaeroides ATCC 17029 4898977 YP_001045889.1 CDS Rsph17029_4039 NC_009050.1 1186673 1187185 D KEGG: rsp:RSP_3306 hypothetical protein; hypothetical protein 1186673..1187185 Rhodobacter sphaeroides ATCC 17029 4899019 YP_001045890.1 CDS Rsph17029_4040 NC_009050.1 1187438 1187698 D PFAM: WGR domain protein; KEGG: rsp:RSP_3307 hypothetical protein; WGR domain-containing protein 1187438..1187698 Rhodobacter sphaeroides ATCC 17029 4899020 YP_001045891.1 CDS Rsph17029_4041 NC_009050.1 1188239 1189162 R PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_3308 possible transporter, DME family, DMT superfamily; hypothetical protein complement(1188239..1189162) Rhodobacter sphaeroides ATCC 17029 4899021 YP_001045892.1 CDS Rsph17029_4042 NC_009050.1 1189235 1190026 R PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rsp:RSP_3309 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein complement(1189235..1190026) Rhodobacter sphaeroides ATCC 17029 4898233 YP_001045893.1 CDS Rsph17029_4043 NC_009050.1 1190069 1190746 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: eli:ELI_13810 hypothetical oxidoreductase, short chaindehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 1190069..1190746 Rhodobacter sphaeroides ATCC 17029 4898234 YP_001045894.1 CDS Rsph17029_4044 NC_009050.1 1191685 1192329 R PFAM: regulatory protein, TetR; KEGG: rsp:RSP_3317 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(1191685..1192329) Rhodobacter sphaeroides ATCC 17029 4899138 YP_001045895.1 CDS Rsph17029_4045 NC_009050.1 1192354 1195473 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rsp:RSP_3318 cation/multidrug efflux pump, RND family; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(1192354..1195473) Rhodobacter sphaeroides ATCC 17029 4898677 YP_001045896.1 CDS Rsph17029_4046 NC_009050.1 1195490 1196653 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rsp:RSP_3321 cation/multidrug efflux pump, membrane-fusion protein; RND family efflux transporter MFP subunit complement(1195490..1196653) Rhodobacter sphaeroides ATCC 17029 4898678 YP_001045897.1 CDS Rsph17029_4047 NC_009050.1 1196750 1198585 R PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rsp:RSP_3322 acetoin transcriptional regulator, sigma54 specific, AcoR; Fis family GAF modulated sigma54 specific transcriptional regulator complement(1196750..1198585) Rhodobacter sphaeroides ATCC 17029 4898679 YP_001045898.1 CDS Rsph17029_4048 NC_009050.1 1198821 1200623 D KEGG: rsp:RSP_3323 putative flavoprotein containing monooxygenase involved in K+ transport; putative flavoprotein containing monooxygenase involved in K+ transport 1198821..1200623 Rhodobacter sphaeroides ATCC 17029 4899026 YP_001045899.1 CDS Rsph17029_4049 NC_009050.1 1201137 1201964 D PFAM: regulatory protein, LuxR; KEGG: rsp:RSP_3324 transcriptional regulator, LuxR family; response regulator receiver protein 1201137..1201964 Rhodobacter sphaeroides ATCC 17029 4899027 YP_001045900.1 CDS Rsph17029_4050 NC_009050.1 1202114 1203619 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rsp:RSP_3325 polysaccharide export transporter, PST family; polysaccharide biosynthesis protein 1202114..1203619 Rhodobacter sphaeroides ATCC 17029 4899028 YP_001045901.1 CDS Rsph17029_4051 NC_009050.1 1203633 1204106 R PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rsp:RSP_3326 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase complement(1203633..1204106) Rhodobacter sphaeroides ATCC 17029 4898556 YP_001045902.1 CDS Rsph17029_4052 NC_009050.1 1204250 1204909 R PFAM: Rhomboid family protein; KEGG: rsp:RSP_3327 possible rhomboid family membrane protein; rhomboid family protein complement(1204250..1204909) Rhodobacter sphaeroides ATCC 17029 4898557 YP_001045903.1 CDS Rsph17029_4053 NC_009050.1 1205057 1205968 R KEGG: rsp:RSP_3328 hypothetical protein; hypothetical protein complement(1205057..1205968) Rhodobacter sphaeroides ATCC 17029 4898558 YP_001045904.1 CDS Rsph17029_4054 NC_009050.1 1206209 1206382 R PFAM: protein of unknown function DUF465; KEGG: rsp:RSP_6254 hypothetical protein; hypothetical protein complement(1206209..1206382) Rhodobacter sphaeroides ATCC 17029 4898935 YP_001045905.1 CDS Rsph17029_4055 NC_009050.1 1206907 1207596 D KEGG: rsp:RSP_3329 hypothetical protein; hypothetical protein 1206907..1207596 Rhodobacter sphaeroides ATCC 17029 4898936 YP_001045906.1 CDS Rsph17029_4056 NC_009050.1 1208099 1209877 D PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rsp:RSP_3330 putative sodium/sulfate transporter, DASS family; TrkA domain-containing protein 1208099..1209877 Rhodobacter sphaeroides ATCC 17029 4898937 YP_001045907.1 CDS Rsph17029_4057 NC_009050.1 1210011 1210475 R PFAM: Cupin 2, conserved barrel domain protein; KEGG: rsp:RSP_3331 cupin domain containg protein; cupin complement(1210011..1210475) Rhodobacter sphaeroides ATCC 17029 4898514 YP_001045908.1 CDS Rsph17029_4058 NC_009050.1 1210533 1211249 R PFAM: LrgB family protein; KEGG: rsp:RSP_3332 putative transmembrane protein; LrgB family protein complement(1210533..1211249) Rhodobacter sphaeroides ATCC 17029 4898515 YP_001045909.1 CDS Rsph17029_4059 NC_009050.1 1211242 1211595 R PFAM: LrgA family protein; KEGG: rsp:RSP_3333 putative holin-like protein; LrgA family protein complement(1211242..1211595) Rhodobacter sphaeroides ATCC 17029 4898516 YP_001045910.1 CDS Rsph17029_4060 NC_009050.1 1211705 1212361 R PFAM: Asp/Glu racemase; KEGG: rsp:RSP_3334 HyuE hydantoin racemase; Asp/Glu racemase complement(1211705..1212361) Rhodobacter sphaeroides ATCC 17029 4898747 YP_001045911.1 CDS Rsph17029_4061 NC_009050.1 1212362 1213198 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3335 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(1212362..1213198) Rhodobacter sphaeroides ATCC 17029 4898748 YP_001045912.1 CDS Rsph17029_4062 NC_009050.1 1213200 1214063 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3336 ABC spermidine/putrescine transporter, inner membrane subunit; binding-protein-dependent transport systems inner membrane component complement(1213200..1214063) Rhodobacter sphaeroides ATCC 17029 4898749 YP_001045913.1 CDS Rsph17029_4063 NC_009050.1 1214297 1215562 R KEGG: rsp:RSP_3337 ABC spermidine/putrescine transporter, periplasmic binding protein; ABC spermidine/putrescine transporter, periplasmic binding protein complement(1214297..1215562) Rhodobacter sphaeroides ATCC 17029 4898984 YP_001045914.1 CDS Rsph17029_4064 NC_009050.1 1215588 1216565 R PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3338 ABC spermidine/putrescine transporter, ATPase subunit; ABC transporter complement(1215588..1216565) Rhodobacter sphaeroides ATCC 17029 4898985 YP_001045915.1 CDS Rsph17029_4065 NC_009050.1 1216777 1217490 D PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rsp:RSP_3339 transcriptional regulator, GntR family; GntR family transcriptional regulator 1216777..1217490 Rhodobacter sphaeroides ATCC 17029 4898986 YP_001045916.1 CDS Rsph17029_4066 NC_009050.1 1217669 1218106 D TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rsp:RSP_3341 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1217669..1218106 Rhodobacter sphaeroides ATCC 17029 4898223 YP_001045917.1 CDS Rsph17029_4067 NC_009050.1 1218103 1219002 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: rsp:RSP_3340 possible transporter, RarD, DMT superfamily; transporter DMT superfamily protein complement(1218103..1219002) Rhodobacter sphaeroides ATCC 17029 4898224 Rsph17029_R0001 tRNA Rsph17029_R0001 NC_009049.1 75917 75991 R tRNA-Val complement(75917..75991) Rhodobacter sphaeroides ATCC 17029 4895498 Rsph17029_R0003 tRNA Rsph17029_R0003 NC_009049.1 89452 89528 D tRNA-Ile 89452..89528 Rhodobacter sphaeroides ATCC 17029 4895383 Rsph17029_R0004 tRNA Rsph17029_R0004 NC_009049.1 89576 89651 D tRNA-Ala 89576..89651 Rhodobacter sphaeroides ATCC 17029 4896177 Rsph17029_R0007 tRNA Rsph17029_R0007 NC_009049.1 93075 93151 D tRNA-Met 93075..93151 Rhodobacter sphaeroides ATCC 17029 4896277 Rsph17029_R0008 tRNA Rsph17029_R0008 NC_009049.1 172949 173024 R tRNA-Thr complement(172949..173024) Rhodobacter sphaeroides ATCC 17029 4898046 Rsph17029_R0009 tRNA Rsph17029_R0009 NC_009049.1 295859 295948 R tRNA-Ser complement(295859..295948) Rhodobacter sphaeroides ATCC 17029 4895657 Rsph17029_R0010 tRNA Rsph17029_R0010 NC_009049.1 314101 314176 R tRNA-Arg complement(314101..314176) Rhodobacter sphaeroides ATCC 17029 4896910 Rsph17029_R0011 tRNA Rsph17029_R0011 NC_009049.1 348793 348868 D tRNA-Trp 348793..348868 Rhodobacter sphaeroides ATCC 17029 4896707 Rsph17029_R0012 tRNA Rsph17029_R0012 NC_009049.1 367470 367545 D tRNA-Trp 367470..367545 Rhodobacter sphaeroides ATCC 17029 4895433 Rsph17029_R0013 tRNA Rsph17029_R0013 NC_009049.1 557446 557532 D tRNA-Leu 557446..557532 Rhodobacter sphaeroides ATCC 17029 4895248 Rsph17029_R0014 tRNA Rsph17029_R0014 NC_009049.1 590248 590331 D tRNA-Leu 590248..590331 Rhodobacter sphaeroides ATCC 17029 4897170 Rsph17029_R0015 tRNA Rsph17029_R0015 NC_009049.1 681946 682021 R tRNA-Met complement(681946..682021) Rhodobacter sphaeroides ATCC 17029 4897457 Rsph17029_R0016 tRNA Rsph17029_R0016 NC_009049.1 758917 758993 R tRNA-Arg complement(758917..758993) Rhodobacter sphaeroides ATCC 17029 4896003 Rsph17029_R0017 tRNA Rsph17029_R0017 NC_009049.1 767347 767421 R tRNA-Gly complement(767347..767421) Rhodobacter sphaeroides ATCC 17029 4896061 Rsph17029_R0018 tRNA Rsph17029_R0018 NC_009049.1 850653 850727 D tRNA-Glu 850653..850727 Rhodobacter sphaeroides ATCC 17029 4896768 RSPH17029_0 tRNA RSPH17029_0 NC_009049.1 940724 940807 R tRNA-Tyr complement(940724..940807) Rhodobacter sphaeroides ATCC 17029 9680167 Rsph17029_R0020 tRNA Rsph17029_R0020 NC_009049.1 1055811 1055887 D tRNA-Pro 1055811..1055887 Rhodobacter sphaeroides ATCC 17029 4895863 Rsph17029_R0021 tRNA Rsph17029_R0021 NC_009049.1 1313806 1313883 R tRNA-Pro complement(1313806..1313883) Rhodobacter sphaeroides ATCC 17029 4896256 Rsph17029_R0022 tRNA Rsph17029_R0022 NC_009049.1 1461693 1461766 R tRNA-Gly complement(1461693..1461766) Rhodobacter sphaeroides ATCC 17029 4896202 Rsph17029_R0023 tRNA Rsph17029_R0023 NC_009049.1 1526103 1526177 D tRNA-Gln 1526103..1526177 Rhodobacter sphaeroides ATCC 17029 4895820 Rsph17029_R0024 tRNA Rsph17029_R0024 NC_009049.1 1555152 1555226 R tRNA-Val complement(1555152..1555226) Rhodobacter sphaeroides ATCC 17029 4895361 Rsph17029_R0025 tRNA Rsph17029_R0025 NC_009049.1 1655806 1655889 R tRNA-Leu complement(1655806..1655889) Rhodobacter sphaeroides ATCC 17029 4895285 Rsph17029_R0026 tRNA Rsph17029_R0026 NC_009049.1 1725419 1725495 R tRNA-Asp complement(1725419..1725495) Rhodobacter sphaeroides ATCC 17029 4895143 Rsph17029_R0027 tRNA Rsph17029_R0027 NC_009049.1 1725531 1725607 R tRNA-Asp complement(1725531..1725607) Rhodobacter sphaeroides ATCC 17029 4896585 Rsph17029_R0028 tRNA Rsph17029_R0028 NC_009049.1 1827841 1827912 D tRNA-Thr 1827841..1827912 Rhodobacter sphaeroides ATCC 17029 4897502 Rsph17029_R0029 tRNA Rsph17029_R0029 NC_009049.1 1863644 1863718 D tRNA-Gly 1863644..1863718 Rhodobacter sphaeroides ATCC 17029 4896090 Rsph17029_R0030 tRNA Rsph17029_R0030 NC_009049.1 1869177 1869250 R tRNA-Cys complement(1869177..1869250) Rhodobacter sphaeroides ATCC 17029 4895313 Rsph17029_R0031 tRNA Rsph17029_R0031 NC_009049.1 1873018 1873102 R tRNA-Leu complement(1873018..1873102) Rhodobacter sphaeroides ATCC 17029 4898060 Rsph17029_R0032 tRNA Rsph17029_R0032 NC_009049.1 1936729 1936803 D tRNA-Asn 1936729..1936803 Rhodobacter sphaeroides ATCC 17029 4896307 Rsph17029_R0034 tRNA Rsph17029_R0034 NC_009049.1 1974753 1974842 R tRNA-Ser complement(1974753..1974842) Rhodobacter sphaeroides ATCC 17029 4896044 Rsph17029_R0035 tRNA Rsph17029_R0035 NC_009049.1 2184212 2184286 D tRNA-Glu 2184212..2184286 Rhodobacter sphaeroides ATCC 17029 4896448 Rsph17029_R0036 tRNA Rsph17029_R0036 NC_009049.1 2389524 2389600 D tRNA-Arg 2389524..2389600 Rhodobacter sphaeroides ATCC 17029 4897017 Rsph17029_R0037 tRNA Rsph17029_R0037 NC_009049.1 2408791 2408866 R tRNA-Phe complement(2408791..2408866) Rhodobacter sphaeroides ATCC 17029 4897827 Rsph17029_R0038 tRNA Rsph17029_R0038 NC_009049.1 2417575 2417649 D tRNA-Thr 2417575..2417649 Rhodobacter sphaeroides ATCC 17029 4895472 Rsph17029_R0040 tRNA Rsph17029_R0040 NC_009049.1 2542432 2542508 D tRNA-His 2542432..2542508 Rhodobacter sphaeroides ATCC 17029 4897687 Rsph17029_R0041 tRNA Rsph17029_R0041 NC_009049.1 2655036 2655112 R tRNA-Pro complement(2655036..2655112) Rhodobacter sphaeroides ATCC 17029 4896999 Rsph17029_R0042 tRNA Rsph17029_R0042 NC_009049.1 2734589 2734663 D tRNA-Lys 2734589..2734663 Rhodobacter sphaeroides ATCC 17029 4897271 Rsph17029_R0043 tRNA Rsph17029_R0043 NC_009049.1 2788869 2788944 D tRNA-Ala 2788869..2788944 Rhodobacter sphaeroides ATCC 17029 4897660 Rsph17029_R0044 tRNA Rsph17029_R0044 NC_009049.1 2860832 2860908 R tRNA-Arg complement(2860832..2860908) Rhodobacter sphaeroides ATCC 17029 4896423 Rsph17029_R0045 tRNA Rsph17029_R0045 NC_009049.1 2963234 2963318 D tRNA-Leu 2963234..2963318 Rhodobacter sphaeroides ATCC 17029 4897067 Rsph17029_R0046 tRNA Rsph17029_R0046 NC_009050.1 20991 21066 D tRNA-Ala 20991..21066 Rhodobacter sphaeroides ATCC 17029 4898331 Rsph17029_R0047 tRNA Rsph17029_R0047 NC_009050.1 359297 359373 D tRNA-Met 359297..359373 Rhodobacter sphaeroides ATCC 17029 4898314 RSPH17029_0a tRNA RSPH17029_0a NC_009050.1 396978 397050 D tRNA-OTHER 396978..397050 Rhodobacter sphaeroides ATCC 17029 9680168 Rsph17029_R0048 tRNA Rsph17029_R0048 NC_009050.1 443280 443353 R tRNA-Leu complement(443280..443353) Rhodobacter sphaeroides ATCC 17029 4898593 Rsph17029_R0049 tRNA Rsph17029_R0049 NC_009050.1 556746 556821 R tRNA-Val complement(556746..556821) Rhodobacter sphaeroides ATCC 17029 4898691 Rsph17029_R0051 tRNA Rsph17029_R0051 NC_009050.1 577583 577659 D tRNA-Ile 577583..577659 Rhodobacter sphaeroides ATCC 17029 4898501 Rsph17029_R0052 tRNA Rsph17029_R0052 NC_009050.1 577707 577782 D tRNA-Ala 577707..577782 Rhodobacter sphaeroides ATCC 17029 4898502 Rsph17029_R0055 tRNA Rsph17029_R0055 NC_009050.1 581206 581282 D tRNA-Met 581206..581282 Rhodobacter sphaeroides ATCC 17029 4899124 Rsph17029_R0056 tRNA Rsph17029_R0056 NC_009050.1 592862 592951 R tRNA-Ser complement(592862..592951) Rhodobacter sphaeroides ATCC 17029 4899068 Rsph17029_R0058 tRNA Rsph17029_R0058 NC_009050.1 613229 613305 D tRNA-Ile 613229..613305 Rhodobacter sphaeroides ATCC 17029 4898615 Rsph17029_R0059 tRNA Rsph17029_R0059 NC_009050.1 613353 613428 D tRNA-Ala 613353..613428 Rhodobacter sphaeroides ATCC 17029 4898616 Rsph17029_R0062 tRNA Rsph17029_R0062 NC_009050.1 616852 616928 D tRNA-Met 616852..616928 Rhodobacter sphaeroides ATCC 17029 4899125 Rsph17029_R0064 tRNA Rsph17029_R0064 NC_009050.1 820780 820856 D tRNA-Ile 820780..820856 Rhodobacter sphaeroides ATCC 17029 4899155 Rsph17029_R0065 tRNA Rsph17029_R0065 NC_009050.1 820904 820979 D tRNA-Ala 820904..820979 Rhodobacter sphaeroides ATCC 17029 4898204 Rsph17029_R0068 tRNA Rsph17029_R0068 NC_009050.1 824403 824479 D tRNA-Met 824403..824479 Rhodobacter sphaeroides ATCC 17029 4898990 Rsph17029_R0069 tRNA Rsph17029_R0069 NC_009050.1 976710 976783 D tRNA-Gly 976710..976783 Rhodobacter sphaeroides ATCC 17029 4898575 Rsph17029_R0070 tRNA Rsph17029_R0070 NC_009050.1 1191159 1191248 D tRNA-Ser 1191159..1191248 Rhodobacter sphaeroides ATCC 17029 4898235 Rsph17029_R0002 rRNA Rsph17029_R0002 NC_009049.1 87772 89231 D 16S ribosomal RNA 87772..89231 Rhodobacter sphaeroides ATCC 17029 4896276 Rsph17029_R0005 rRNA Rsph17029_R0005 NC_009049.1 89899 92816 D 23S ribosomal RNA 89899..92816 Rhodobacter sphaeroides ATCC 17029 4895269 Rsph17029_R0006 rRNA Rsph17029_R0006 NC_009049.1 92914 93031 D 5S ribosomal RNA 92914..93031 Rhodobacter sphaeroides ATCC 17029 4896100 Rsph17029_R0050 rRNA Rsph17029_R0050 NC_009050.1 575903 577362 D 16S ribosomal RNA 575903..577362 Rhodobacter sphaeroides ATCC 17029 4898625 Rsph17029_R0053 rRNA Rsph17029_R0053 NC_009050.1 578030 580947 D 23S ribosomal RNA 578030..580947 Rhodobacter sphaeroides ATCC 17029 4898884 Rsph17029_R0054 rRNA Rsph17029_R0054 NC_009050.1 581045 581162 D 5S ribosomal RNA 581045..581162 Rhodobacter sphaeroides ATCC 17029 4899123 Rsph17029_R0057 rRNA Rsph17029_R0057 NC_009050.1 611549 613008 D 16S ribosomal RNA 611549..613008 Rhodobacter sphaeroides ATCC 17029 4899052 Rsph17029_R0060 rRNA Rsph17029_R0060 NC_009050.1 613676 616593 D 23S ribosomal RNA 613676..616593 Rhodobacter sphaeroides ATCC 17029 4899024 Rsph17029_R0061 rRNA Rsph17029_R0061 NC_009050.1 616691 616808 D 5S ribosomal RNA 616691..616808 Rhodobacter sphaeroides ATCC 17029 4899025 Rsph17029_R0063 rRNA Rsph17029_R0063 NC_009050.1 819100 820559 D 16S ribosomal RNA 819100..820559 Rhodobacter sphaeroides ATCC 17029 4899154 Rsph17029_R0066 rRNA Rsph17029_R0066 NC_009050.1 821227 824144 D 23S ribosomal RNA 821227..824144 Rhodobacter sphaeroides ATCC 17029 4898205 Rsph17029_R0067 rRNA Rsph17029_R0067 NC_009050.1 824242 824359 D 5S ribosomal RNA 824242..824359 Rhodobacter sphaeroides ATCC 17029 4898989