-- dump date 20120504_160250 -- class Genbank::CDS -- table cds_note -- id note YP_004010391.1 KEGG: atc:AGR_C_714 probable ABC transporter ATP-binding protein YP_004010392.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: rpt:Rpal_0001 chromosomal replication initiation protein; SMART: replication initiation factor DnaA; ATPase AAA YP_004010393.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III subunit beta; KEGG: mno:Mnod_0002 DNA polymerase III beta subunit; PFAM: DNA polymerase III beta chain YP_004010394.1 KEGG: mlo:mll5578 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_004010395.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase subunit beta; KEGG: pla:Plav_0007 DNA gyrase subunit beta; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004010396.1 KEGG: dre:571621 similar to Nuclear pore complex protein Nup153 (nucleoporin Nup153) (153 kDa nucleoporin) YP_004010397.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004010398.1 TIGRFAM: CbbX protein; PFAM: ATPase AAA central domain protein; KEGG: rsp:RSP_1280 CbbX protein; SMART: ATPase AAA YP_004010399.1 KEGG: ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase small chain YP_004010400.1 KEGG: nwi:Nwi_2929 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; ribulose bisphosphate carboxylase, large subunit-like YP_004010401.1 KEGG: rpc:RPC_2897 transketolase; TIGRFAM: transketolase; PFAM: transketolase domain-containing protein; transketolase central region YP_004010402.1 KEGG: rpt:Rpal_5125 phosphoribulokinase YP_004010403.1 PFAM: inositol phosphatase/fructose-16-bisphosphatase; KEGG: inositol phosphatase/fructose-16-bisphosphatase YP_004010404.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_004010405.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: mpo:Mpop_4835 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain YP_004010406.1 PFAM: aminotransferase class I and II; KEGG: mrd:Mrad2831_1476 L-threonine-O-3-phosphate decarboxylase YP_004010407.1 KEGG: avi:Avi_2926 transcriptional regulator ArsR family; PFAM: methyltransferase type 11; regulatory protein ArsR; SMART: regulatory protein ArsR YP_004010408.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: mno:Mnod_4919 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_004010409.1 PFAM: homocysteine S-methyltransferase; KEGG: pag:PLES_34821 B12-dependent methionine synthase YP_004010410.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: azl:AZL_012800 hypothetical protein YP_004010411.1 PFAM: protein of unknown function DUF403; KEGG: rce:RC1_1363 hypothetical protein YP_004010412.1 KEGG: pla:Plav_1574 acetoacetyl-CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004010413.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: azl:AZL_023130 acetyl-CoA C-acetyltransferase; PFAM: thiolase-like YP_004010414.1 KEGG: bbt:BBta_7615 polyhydroxyalkanoate synthesis repressor PhaR-like protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein YP_004010415.1 KEGG: afm:AFUA_8G02570 flavin-binding monooxygenase YP_004010416.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: aca:ACP_0749 NAD dependent epimerase/dehydratase family protein YP_004010417.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004010418.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_4434 glycosyl transferase group 1 YP_004010419.1 KEGG: bid:Bind_0736 glycine dehydrogenase subunit 2 YP_004010420.1 KEGG: pla:Plav_0690 glycine dehydrogenase subunit 1; PFAM: glycine cleavage system P-protein-like YP_004010421.1 KEGG: tma:TM0212 glycine cleavage system protein H; TIGRFAM: glycine cleavage system protein H; PFAM: glycine cleavage H-protein YP_004010422.1 KEGG: azc:AZC_4245 glycine cleavage system T protein; TIGRFAM: glycine cleavage system protein T; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_004010423.1 KEGG: geo:Geob_0097 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; TIGRFAM: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase; PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein YP_004010424.1 KEGG: mag:amb2143 dihydroxynaphthoic acid synthase; TIGRFAM: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; PFAM: enoyl-CoA hydratase/isomerase YP_004010425.1 KEGG: gme:Gmet_2150 enoyl-CoA hydratase/isomerase; TIGRFAM: cyclohexa-1,5-dienecarbonyl-CoA hydratase; PFAM: enoyl-CoA hydratase/isomerase YP_004010426.1 TIGRFAM: benzoyl-CoA reductase, subunit C; KEGG: mag:amb2141 C-subunit of benzoyl-CoA reductase; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component YP_004010427.1 TIGRFAM: benzoyl-CoA reductase, subunit B; KEGG: mag:amb2140 B-subunit of benzoyl-CoA reductase; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component YP_004010428.1 TIGRFAM: benzoyl-CoA reductase, subunit A; CoA-substrate-specific enzyme activase; KEGG: mag:amb2139 2-hydroxyglutaryl-CoA dehydratase activator protein; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004010429.1 TIGRFAM: benzoyl-CoA reductase, subunit D; CoA-substrate-specific enzyme activase; KEGG: mag:amb2138 D-subunit of benzoyl-CoA reductase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004010430.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mag:amb2150 dehydrogenase YP_004010431.1 KEGG: mag:amb3391 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004010432.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mag:amb3392 hypothetical protein YP_004010433.1 KEGG: hoh:Hoch_6534 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase YP_004010434.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: mag:amb2595 acetyl-CoA acetyltransferase; PFAM: thiolase-like YP_004010435.1 KEGG: mag:amb4338 ABC-type cobalt transporter, ATPase component; PFAM: ABC transporter; SMART: ATPase AAA YP_004010436.1 KEGG: rpe:RPE_1968 cobalt ABC transporter inner membrane protein CbiQ; TIGRFAM: cobalt ABC transporter inner membrane protein CbiQ; PFAM: cobalt transporter YP_004010437.1 KEGG: rpc:RPC_1950 hypothetical protein YP_004010438.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rpc:RPC_1951 cobalt transporter CbiM YP_004010439.1 PFAM: nickel transport complex, NikM subunit, transmembrane; KEGG: rpe:RPE_1971 ABC-type Co2+ transporter, periplasmic component YP_004010440.1 PFAM: NikR nickel binding; KEGG: rpc:RPC_1953 nickel responsive regulator YP_004010441.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: rce:RC1_1158 protein-L-isoaspartate O-methyltransferase YP_004010442.1 KEGG: msl:Msil_1453 type I secretion outer membrane protein, TolC family; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_004010443.1 PFAM: protein of unknown function DUF2497; KEGG: pcs:Pc22g03720 Pc22g03720 YP_004010444.1 KEGG: rpb:RPB_2892 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004010445.1 PFAM: sodium:dicarboxylate symporter; KEGG: azc:AZC_3014 C4-dicarboxylate transporter YP_004010446.1 KEGG: ara:Arad_9154 outer membrane protein YP_004010447.1 KEGG: cre:CHLREDRAFT_196839 hypothetical protein YP_004010448.1 KEGG: hba:Hbal_1849 cobyrinic acid ac-diamide synthase YP_004010449.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mno:Mnod_0247 integrase family protein YP_004010450.1 KEGG: pla:Plav_1459 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_004010451.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: mno:Mnod_1264 thiamine pyrophosphate protein domain protein TPP-binding YP_004010452.1 PFAM: protein of unknown function DUF336; KEGG: dvm:DvMF_1930 protein of unknown function DUF336 YP_004010453.1 PFAM: protein of unknown function DUF882; KEGG: protein of unknown function DUF882 YP_004010455.1 KEGG: mlo:mlr3002 oligoendopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F YP_004010456.1 KEGG: rec:RHECIAT_CH0000862 hypothetical protein YP_004010457.1 PFAM: ABC-1 domain-containing protein; KEGG: ABC-1 domain protein YP_004010458.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: msl:Msil_0268 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_004010459.1 KEGG: oan:Oant_0744 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004010460.1 KEGG: oca:OCAR_4505 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_004010461.1 KEGG: pzu:PHZ_c3435 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004010462.1 PFAM: protein of unknown function UPF0075; KEGG: nwi:Nwi_1667 anhydro-N-acetylmuramic acid kinase YP_004010463.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: xau:Xaut_4474 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004010464.1 KEGG: pla:Plav_3269 hypothetical protein YP_004010465.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: mno:Mnod_6052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004010466.1 PFAM: protein of unknown function DUF583; KEGG: pla:Plav_3273 hypothetical protein YP_004010467.1 PFAM: protein of unknown function DUF74; KEGG: protein of unknown function DUF74 YP_004010468.1 KEGG: hypothetical protein YP_004010469.1 KEGG: pla:Plav_0703 ribonuclease H; PFAM: ribonuclease HII/HIII YP_004010470.1 KEGG: radical SAM protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004010471.1 PFAM: glycosyl transferase family 2; KEGG: pla:Plav_0708 glycosyl transferase YP_004010472.1 KEGG: ter:Tery_0082 metallophosphoesterase YP_004010473.1 PFAM: protein of unknown function DUF2064; KEGG: pla:Plav_0709 hypothetical protein YP_004010475.1 PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_3004 major facilitator superfamily MFS_1 YP_004010476.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_2258 NUDIX hydrolase YP_004010477.1 PFAM: ferritin; KEGG: rpt:Rpal_3094 ferritin Dps family protein YP_004010478.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sun:SUN_0830 hypothetical protein YP_004010479.1 PFAM: acriflavin resistance protein; KEGG: rpa:RPA3483 RND efflux transporter YP_004010480.1 KEGG: xau:Xaut_0736 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004010481.1 KEGG: 4-hydroxybenzoate polyprenyltransferase YP_004010482.1 TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: mno:Mnod_7244 succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004010483.1 KEGG: rhi:NGR_c31360 succinate dehydrogenase hydrophobic membrane anchor protein; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit YP_004010484.1 KEGG: mlo:mll4266 succinate dehydrogenase membrane anchor subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_004010485.1 PFAM: MaoC domain protein dehydratase; KEGG: mno:Mnod_3627 MaoC domain protein dehydratase YP_004010486.1 KEGG: rpd:RPD_1279 molybdopterin converting factor, subunit 1; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_004010487.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpe:RPE_0925 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_004010488.1 TIGRFAM: glycyl-tRNA synthetase, subunit alpha; KEGG: msl:Msil_1111 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha YP_004010489.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; KEGG: dat:HRM2_48770 ArgE; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004010490.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: xau:Xaut_0037 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004010491.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rpt:Rpal_4780 protein of unknown function DUF6 transmembrane YP_004010492.1 PFAM: protein of unknown function DUF466; KEGG: aav:Aave_4227 hypothetical protein YP_004010493.1 PFAM: carbon starvation protein CstA; KEGG: rpd:RPD_1551 carbon starvation protein CstA YP_004010494.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: xau:Xaut_0035 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_004010495.1 PFAM: methyltransferase type 11; KEGG: app:CAP2UW1_0927 methyltransferase type 11 YP_004010496.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; KEGG: mlo:mlr9681 sensory transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_004010497.1 PFAM: glycoside hydrolase family 31; KEGG: mmw:Mmwyl1_2781 glycoside hydrolase family protein YP_004010498.1 KEGG: S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004010499.1 PFAM: MraZ domain; KEGG: azc:AZC_4547 MraZ protein YP_004010500.1 KEGG: bmr:BMI_I21 acetyl-coenzyme A synthetase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase YP_004010501.1 KEGG: rlg:Rleg_0411 AsmA family protein YP_004010502.1 KEGG: gdj:Gdia_1405 nitroreductase YP_004010503.1 PFAM: alpha/beta hydrolase fold; KEGG: gem:GM21_3237 alpha/beta hydrolase fold protein YP_004010504.1 TIGRFAM: molybdate ABC transporter ATPase; PFAM: ABC transporter; TOBE domain-containing protein; KEGG: mlo:mll1463 molybdenum transporter ModC; SMART: ATPase AAA YP_004010505.1 manually curated; TIGRFAM: molybdate ABC transporter inner membrane protein; KEGG: mlo:mll1464 molybdate ABC transporter permease protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004010506.1 KEGG: atc:AGR_C_4642 molybdate-binding periplasmic protein; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004010507.1 KEGG: msl:Msil_1819 phosphoenolpyruvate carboxylase; PFAM: phosphoenolpyruvate carboxylase, C-terminal region YP_004010508.1 PFAM: TOBE domain-containing protein; KEGG: rsk:RSKD131_4477 molybdenum-pterin binding protein YP_004010509.1 KEGG: mpo:Mpop_2461 protein tyrosine phosphatase YP_004010510.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0943 propionate--CoA ligase YP_004010511.1 KEGG: azo:azo3768 catalase; PFAM: catalase related subgroup; catalase domain protein YP_004010512.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bmr:BMI_I1965 peptidyl-prolyl cis-trans isomerase YP_004010513.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: rlt:Rleg2_3538 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ YP_004010514.1 PFAM: NUDIX hydrolase; KEGG: rpb:RPB_0029 NUDIX hydrolase YP_004010515.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: vap:Vapar_5067 lysine exporter protein (LysE/YggA) YP_004010516.1 KEGG: pla:Plav_1730 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004010517.1 KEGG: lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein YP_004010518.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: pla:Plav_3646 UBA/ThiF-type NAD/FAD binding protein YP_004010519.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1615 GCN5-related N-acetyltransferase YP_004010520.1 PFAM: protein of unknown function DUF1457; KEGG: pla:Plav_0872 hypothetical protein YP_004010521.1 PFAM: ROSMUCR transcriptional regulator; KEGG: msl:Msil_1673 MucR family transcriptional regulator YP_004010522.1 KEGG: tmz:Tmz1t_0521 allophanate hydrolase subunit 1; PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1 YP_004010523.1 TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; KEGG: met:M446_2133 UreA amidolyase related protein; SMART: allophanate hydrolase subunit 2 YP_004010524.1 KEGG: met:M446_5500 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_004010525.1 KEGG: nha:Nham_0088 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_004010526.1 PFAM: alpha/beta hydrolase fold; KEGG: pag:PLES_21141 lipase YP_004010527.1 KEGG: pla:Plav_3604 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_004010528.1 KEGG: ava:Ava_1683 OpcA YP_004010529.1 PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin 2; KEGG: bja:blr4438 hypothetical protein YP_004010530.1 TIGRFAM: penicillin-binding protein 1C; KEGG: mex:Mext_1396 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein YP_004010531.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: mca:MCA1110 glucan biosynthesis protein D YP_004010532.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; hypothetical protein; histidine kinase A domain protein; response regulator receiver; KEGG: met:M446_1809 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver YP_004010533.1 KEGG: cak:Caul_0470 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004010534.1 PFAM: polyprenyl synthetase; KEGG: xau:Xaut_0205 polyprenyl synthetase YP_004010535.1 KEGG: rle:RL4627 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_004010536.1 KEGG: nwi:Nwi_0411 4Fe-4S ferredoxin iron-sulfur binding YP_004010537.1 TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: mch:Mchl_5204 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004010538.1 KEGG: psa:PST_3874 lycopene cyclase; TIGRFAM: lycopene cyclase; lycopene cyclase family protein; PFAM: Lycopene beta and epsilon cyclase YP_004010539.1 KEGG: xau:Xaut_3578 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase YP_004010540.1 KEGG: gau:GAU_0057 hypothetical protein YP_004010541.1 PFAM: fatty acid hydroxylase; KEGG: psa:PST_3871 beta-carotene hydroxylase YP_004010542.1 PFAM: polyprenyl synthetase; KEGG: cak:Caul_1707 polyprenyl synthetase YP_004010543.1 PFAM: protein of unknown function DUF1330; KEGG: bcs:BCAN_A2174 hypothetical protein YP_004010544.1 KEGG: msl:Msil_2029 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase YP_004010545.1 KEGG: azc:AZC_3747 hypothetical protein YP_004010546.1 KEGG: rlt:Rleg2_1227 hypothetical protein YP_004010547.1 KEGG: dvi:Dvir_GJ21135 GJ21135 gene product from transcript GJ21135-RA YP_004010548.1 KEGG: dwi:Dwil_GK21628 GK21628 gene product from transcript GK21628-RA YP_004010549.1 KEGG: cbr:CBG03153 Hypothetical protein CBG03153 YP_004010550.1 KEGG: dwi:Dwil_GK21532 GK21532 gene product from transcript GK21532-RA YP_004010551.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004010552.1 KEGG: ank:AnaeK_2075 hypothetical protein YP_004010553.1 PFAM: FAD dependent oxidoreductase; KEGG: scl:sce2184 electron transfer oxidoreductase YP_004010554.1 KEGG: scl:sce2183 3-demethylubiquinone-9 3-O-methyltransferase YP_004010555.1 KEGG: scl:sce2182 naringenin-chalcone synthase; PFAM: chalcone and stilbene synthase domain protein YP_004010556.1 KEGG: rpc:RPC_2140 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: peptidoglycan-binding protein YP_004010557.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:pRL90175 3-hydroxybutyrate dehydrogenase YP_004010558.1 KEGG: rpt:Rpal_5167 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004010559.1 PFAM: glycosyl transferase family 2; KEGG: pla:Plav_0424 glycosyl transferase YP_004010560.1 KEGG: xau:Xaut_4854 hypothetical protein YP_004010561.1 KEGG: xau:Xaut_4853 hypothetical protein YP_004010562.1 KEGG: bja:blr1149 hypothetical protein YP_004010563.1 PFAM: hypothetical protein; KEGG: pde:Pden_2733 hypothetical protein YP_004010564.1 PFAM: protein of unknown function DUF81; KEGG: oan:Oant_4039 hypothetical protein YP_004010565.1 KEGG: met:M446_3098 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004010566.1 KEGG: rhi:NGR_c28760 two-component response regulator transcriptional regulatory protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004010567.1 PFAM: peptidase M50; hypothetical protein; KEGG: sat:SYN_00323 M50 family membrane endopeptidase YP_004010568.1 PFAM: isochorismatase hydrolase; KEGG: met:M446_0481 isochorismatase hydrolase YP_004010569.1 KEGG: cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_004010570.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: cytochrome bd ubiquinol oxidase subunit I YP_004010571.1 KEGG: hypothetical protein YP_004010572.1 KEGG: rce:RC1_0101 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_004010573.1 PFAM: ETC complex I subunit conserved region; KEGG: pla:Plav_2976 ETC complex I subunit region YP_004010574.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tmz:Tmz1t_3455 NAD-dependent epimerase/dehydratase YP_004010575.1 PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 PadR family transcriptional regulator YP_004010576.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rpt:Rpal_2510 flavin reductase domain protein FMN-binding YP_004010577.1 PFAM: protein of unknown function DUF2252; KEGG: msl:Msil_2675 hypothetical protein YP_004010578.1 KEGG: nha:Nham_4237 hypothetical protein YP_004010579.1 KEGG: rpb:RPB_0499 hypothetical protein YP_004010580.1 KEGG: rpd:RPD_0978 DedA family protein YP_004010581.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: rpc:RPC_2184 ribulose 1 5-bisphosphate carboxylase large subunit-like YP_004010582.1 PFAM: cupin; KEGG: cupin 2 conserved barrel domain protein YP_004010583.1 KEGG: bid:Bind_2068 poly (3-hydroxybutyrate) depolymerase YP_004010584.1 PFAM: hypothetical protein; KEGG: mar:MAE_03780 hypotheticalprotein YP_004010585.1 KEGG: mlo:mll9166 glycosy hydrolase family protein YP_004010586.1 PFAM: glycosyl transferase group 1; KEGG: mag:amb0148 hypothetical protein YP_004010587.1 KEGG: bid:Bind_0501 inner membrane protein YP_004010588.1 PFAM: protein of unknown function UPF0118; KEGG: protein of unknown function UPF0118 YP_004010589.1 KEGG: mlo:mlr7968 hypothetical protein YP_004010590.1 TIGRFAM: polyphosphate kinase; KEGG: bid:Bind_1568 polyphosphate kinase; PFAM: polyphosphate kinase YP_004010591.1 PFAM: Ppx/GppA phosphatase; KEGG: xau:Xaut_3126 Ppx/GppA phosphatase YP_004010592.1 KEGG: sme:SMa0116 DnaJ/CbpA-type protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004010593.1 KEGG: bpr:GBP346_A0377 hypothetical protein YP_004010594.1 KEGG: mag:amb2827 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_004010595.1 PFAM: hydroxyneurosporene synthase; KEGG: mrd:Mrad2831_2823 hydroxyneurosporene synthase YP_004010596.1 KEGG: mex:Mext_2726 phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: amine oxidase YP_004010597.1 KEGG: rce:RC1_2092 hydroxyneurosporene methyltransferase; manually curated; PFAM: O-methyltransferase family 2 YP_004010598.1 KEGG: msl:Msil_2051 chlorophyll synthesis pathway, BchC; TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: alcohol dehydrogenase GroES domain protein YP_004010599.1 TIGRFAM: chlorophyllide reductase iron protein subunit X; KEGG: rpt:Rpal_1710 chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein YP_004010600.1 KEGG: rce:RC1_2095 chlorophyllide reductase subunit Y; TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1 YP_004010601.1 KEGG: rpc:RPC_1295 chlorophyllide reductase subunit Z; TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1 YP_004010602.1 KEGG: mpo:Mpop_2855 hypothetical protein YP_004010603.1 PFAM: antenna complex alpha/subunit beta; KEGG: rce:RC1_2097 light-harvesting I complex subunit beta YP_004010604.1 PFAM: antenna complex alpha/subunit beta; KEGG: mch:Mchl_2962 antenna complex alpha/subunit beta YP_004010605.1 KEGG: mch:Mchl_2963 photosynthetic reaction center L subunit; TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein YP_004010606.1 KEGG: msl:Msil_2059 photosynthetic reaction center subunit M; TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein YP_004010607.1 PFAM: photosynthetic reaction centre cytochrome C subunit; KEGG: rce:RC1_2101 photosynthetic reaction center cytochrome C subunit YP_004010608.1 KEGG: atc:AGR_C_39 hypothetical protein; TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase YP_004010609.1 KEGG: azl:AZL_027200 double-strand break repair protein YP_004010610.1 PFAM: nucleotidyl transferase; KEGG: mno:Mnod_1607 nucleotidyl transferase YP_004010611.1 KEGG: mes:Meso_2140 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004010612.1 KEGG: rpb:RPB_4173 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004010613.1 KEGG: oca:OCAR_7201 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004010614.1 PFAM: glycosyl transferase family 2; KEGG: rsq:Rsph17025_1960 glycosyl transferase YP_004010615.1 KEGG: type III restriction-modification system, restriction endonucleasesubunit YP_004010616.1 PFAM: dihydroneopterin aldolase; KEGG: bid:Bind_3577 dihydroneopterin aldolase YP_004010617.1 KEGG: ncr:NCU01022 similar to domain protein YP_004010618.1 PFAM: PRC-barrel domain protein; KEGG: hypothetical protein YP_004010619.1 KEGG: oca:OCAR_6542 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004010620.1 PFAM: glutathione S-transferase domain; KEGG: mes:Meso_1555 glutathione S-transferase-like YP_004010621.1 KEGG: mdi:METDI2760 beta-lactamase-like YP_004010622.1 KEGG: avi:Avi_2055 transcriptional regulator AsnC family; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004010623.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: pla:Plav_1479 glutamate 5-kinase; SMART: PUA domain containing protein YP_004010624.1 manually curated; KEGG: scb:SCAB_61941 hypothetical protein YP_004010625.1 KEGG: xau:Xaut_2058 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase YP_004010626.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; KEGG: rpt:Rpal_0160 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_004010628.1 KEGG: bid:Bind_1708 hypothetical protein YP_004010629.1 PFAM: thioesterase; KEGG: bpr:GBP346_A1693 thioesterase family protein YP_004010630.1 PFAM: protein of unknown function DUF1045; KEGG: rsq:Rsph17025_0908 hypothetical protein YP_004010631.1 KEGG: mlo:mll4552 intracellular PHB depolymerase; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004010632.1 PFAM: electron transporter SCO1/SenC; KEGG: bja:blr1131 cytochrome C oxidase assembly factor transmembrane protein YP_004010633.1 KEGG: azc:AZC_4692 histidine kinase A; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004010634.1 KEGG: azc:AZC_4693 transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004010635.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rhi:NGR_c04170 cytidine and deoxycytidylate deaminase YP_004010636.1 KEGG: hne:HNE_1751 NADH dehydrogenase subunit G YP_004010637.1 PFAM: pseudouridine synthase; KEGG: RNA-binding S4 domain protein YP_004010638.1 KEGG: rhi:NGR_c04190 methylase protein; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004010639.1 KEGG: reu:Reut_A3459 trans-aconitate 2-methyltransferase; PFAM: methyltransferase type 12 YP_004010640.1 PFAM: hypothetical protein; KEGG: hypothetical protein YP_004010641.1 KEGG: ara:Arad_4429 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004010642.1 KEGG: mbr:MONBRDRAFT_10544 hypothetical protein YP_004010643.1 PFAM: secretion protein HlyD; KEGG: bbt:BBta_7064 hypothetical protein YP_004010644.1 KEGG: bbt:BBta_7063 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004010645.1 PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_7062 ABC transporter permease YP_004010646.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: TraR/DksA family transcriptional regulator YP_004010647.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: mlo:mlr5329 malic enzyme YP_004010648.1 PFAM: protein of unknown function DUF323; KEGG: azl:AZL_f01070 hypothetical protein YP_004010649.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpb:RPB_2782 hypothetical protein YP_004010650.1 TIGRFAM: quinolinate synthetase complex, subunit alpha; KEGG: rpe:RPE_4400 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_004010651.1 KEGG: oca:OCAR_6943 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004010652.1 KEGG: mrd:Mrad2831_4673 DNA helicase YP_004010653.1 KEGG: rpa:RPA0082 2-polyprenylphenol 6-hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein YP_004010654.1 KEGG: exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_004010655.1 KEGG: oan:Oant_2353 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004010656.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: met:M446_2467 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004010657.1 KEGG: mgm:Mmc1_2527 cytochrome-c peroxidase; PFAM: Di-haem cytochrome C peroxidase YP_004010658.1 KEGG: nhl:Nhal_1542 hypothetical protein YP_004010659.1 KEGG: dol:Dole_0419 hypothetical protein YP_004010660.1 TIGRFAM: adenosylhomocysteinase; KEGG: oan:Oant_0822 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_004010661.1 KEGG: rpb:RPB_0700 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004010662.1 PFAM: hypothetical protein; KEGG: met:M446_0460 hypothetical protein YP_004010663.1 KEGG: bra:BRADO4693 multidrug ABC transporter ATPase/permease; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_004010664.1 KEGG: azc:AZC_3726 outer membrane protein Omp31 precursor YP_004010665.1 PFAM: major facilitator superfamily MFS_1; KEGG: bra:BRADO5110 major facilitator superfamily permease YP_004010666.1 KEGG: pla:Plav_0526 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004010667.1 KEGG: rpd:RPD_4276 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004010668.1 PFAM: protein of unknown function DUF329; KEGG: msl:Msil_0756 protein of unknown function DUF329 YP_004010670.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: serine-type D-Ala-D-Ala carboxypeptidase YP_004010671.1 KEGG: bcv:Bcav_1654 ROK family protein YP_004010672.1 SMART: helix-turn-helix domain protein; KEGG: mes:Meso_2258 XRE family transcriptional regulator YP_004010673.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bja:blr6339 hydrogenase 4 subunit B YP_004010674.1 KEGG: bid:Bind_2475 NADH dehydrogenase YP_004010675.1 KEGG: xau:Xaut_0168 hydrogenase-4 component E YP_004010676.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpe:RPE_0955 hydrogenase 4 subunit F YP_004010677.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: xau:Xaut_0170 NADH-ubiquinone oxidoreductase chain 49kDa YP_004010678.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bja:blr6344 hydrogenase-3 subunit G YP_004010679.1 PFAM: SirA-like domain-containing protein; KEGG: sil:SPO1895 SirA family protein YP_004010680.1 PFAM: molybdopterin binding domain; KEGG: met:M446_6952 molybdopterin binding domain-containing protein YP_004010681.1 TIGRFAM: methionine aminopeptidase, type I; KEGG: azc:AZC_4203 methionine aminopeptidase; PFAM: peptidase M24 YP_004010682.1 PFAM: aldo/keto reductase; KEGG: ank:AnaeK_3134 aldo/keto reductase YP_004010683.1 SMART: helix-turn-helix domain protein; KEGG: rlg:Rleg_3579 helix-turn-helix domain protein YP_004010684.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_4162 regulatory protein YP_004010685.1 KEGG: rru:Rru_A2489 catalase; PFAM: catalase related subgroup; catalase domain protein YP_004010686.1 KEGG: pde:Pden_2879 F0F1 ATP synthase subunit A YP_004010687.1 SMART: von Willebrand factor A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: pla:Plav_1712 cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit YP_004010688.1 SMART: ATPase AAA; TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: msl:Msil_0318 cobalt chelatase, pCobS small subunit; PFAM: ATPase AAA YP_004010689.1 KEGG: mes:Meso_3068 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004010690.1 PFAM: BolA family protein; KEGG: ptr:457263 bolA homolog 1 (E. coli) YP_004010691.1 PFAM: phospholipase/carboxylesterase; KEGG: xau:Xaut_3842 phospholipase/carboxylesterase YP_004010692.1 KEGG: app:CAP2UW1_2797 hypothetical protein YP_004010693.1 PFAM: protein of unknown function DUF1614; KEGG: smd:Smed_5957 hypothetical protein YP_004010694.1 KEGG: mms:mma_2485 ABC-type sulfonate/nitrate transport system substrate-binding protein YP_004010695.1 KEGG: sit:TM1040_0952 hypothetical protein YP_004010696.1 KEGG: transmembrane signal peptide protein YP_004010697.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; KEGG: azc:AZC_3642 DNA primase; SMART: Toprim sub domain-containing protein YP_004010698.1 KEGG: xau:Xaut_1238 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein YP_004010699.1 KEGG: mch:Mchl_0014 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_004010700.1 PFAM: BolA family protein; KEGG: azl:AZL_006630 BolA protein YP_004010701.1 PFAM: glycosyl transferase family 2; KEGG: acr:Acry_0383 glycosyl transferase YP_004010702.1 KEGG: mlo:mll0578 hypothetical protein YP_004010703.1 KEGG: acr:Acry_1896 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004010704.1 KEGG: acr:Acry_1897 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD YP_004010705.1 KEGG: acr:Acry_1898 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: ATPase AAA YP_004010706.1 PFAM: Collagen triple helix repeat-containing protein; KEGG: mlo:mlr0587 hypothetical protein YP_004010707.1 PFAM: glycosyl transferase family 2; KEGG: mlo:mll0582 hypothetical protein YP_004010708.1 PFAM: methyltransferase type 12; KEGG: rlg:Rleg_1274 hypothetical protein YP_004010709.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: pla:Plav_3032 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004010710.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004010711.1 KEGG: rpe:RPE_2706 peptidase M23B; PFAM: peptidase M23; peptidoglycan-binding lysin domain; SMART: peptidoglycan-binding LysM YP_004010712.1 PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_3298 malonyl-CoA synthase YP_004010713.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pam:PANA_4007 YfbW YP_004010714.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mhu:Mhun_2116 small multidrug resistance transmembrane protein YP_004010715.1 PFAM: NADPH-dependent FMN reductase; KEGG: azl:AZL_b05570 FMN reductase YP_004010716.1 PFAM: regulatory protein TetR; KEGG: bcj:BCAM0076 TetR family regulatory protein YP_004010717.1 PFAM: protein of unknown function DUF2236; KEGG: cak:Caul_3974 hypothetical protein YP_004010718.1 KEGG: pla:Plav_3235 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004010719.1 KEGG: btr:Btr_0876 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004010720.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; Clp ATPase-like; KEGG: pla:Plav_3231 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase AAA YP_004010722.1 SMART: peptidase S16; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: met:M446_6585 ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein YP_004010723.1 PFAM: protein of unknown function DUF985; KEGG: gdj:Gdia_0454 protein of unknown function DUF985 YP_004010724.1 KEGG: bra:BRADO6235 lysophospholipase L2, (lecithinase B); PFAM: alpha/beta hydrolase fold YP_004010725.1 PFAM: heat shock protein Hsp20; KEGG: mno:Mnod_1728 heat shock protein HSP20 YP_004010726.1 PFAM: (uracil-5)-methyltransferase; KEGG: (uracil-5)-methyltransferase YP_004010727.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: hemolysin A; SMART: RNA-binding S4 domain protein YP_004010728.1 KEGG: mlo:mlr3116 hypothetical protein; PFAM: nuclear protein SET; SMART: nuclear protein SET YP_004010729.1 KEGG: mch:Mchl_4188 hypothetical protein YP_004010730.1 KEGG: bra:BRADO4549 D-alanyl-D-alanine carboxypeptidase (peptidase S11)(dd-carboxypeptidase); PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; sporulation domain-containing protein YP_004010731.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: pla:Plav_2797 ATP-dependent Clp protease adaptor protein ClpS YP_004010732.1 TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA central domain protein; Clp ATPase-like; KEGG: ATP-dependent Clp protease ATP-binding subunit ClpA; SMART: ATPase AAA YP_004010733.1 PFAM: AzlC family protein; KEGG: azc:AZC_1599 hypothetical protein YP_004010734.1 PFAM: branched-chain amino acid transport; KEGG: rpb:RPB_2402 hypothetical protein YP_004010735.1 PFAM: NAD-glutamate dehydrogenase; KEGG: NAD-glutamate dehydrogenase YP_004010736.1 KEGG: gau:GAU_3816 endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP YP_004010737.1 KEGG: rpe:RPE_1961 hypothetical protein YP_004010738.1 KEGG: rpd:RPD_2386 hypothetical protein YP_004010739.1 KEGG: rpe:RPE_3974 hypothetical protein YP_004010740.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; peptidoglycan-binding protein; KEGG: azc:AZC_0439 hypothetical protein YP_004010741.1 KEGG: bid:Bind_2176 thioredoxin; TIGRFAM: thioredoxin; PFAM: thioredoxin domain-containing protein YP_004010742.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bja:blr3130 serine protease DO-like precursor; SMART: PDZ/DHR/GLGF domain protein YP_004010743.1 PFAM: peptidase M48 Ste24p; KEGG: rpt:Rpal_0855 heat shock protein HtpX YP_004010744.1 KEGG: nwi:Nwi_0156 tRNA and rRNA cytosine-C5-methylase; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_004010745.1 KEGG: rpe:RPE_2601 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_004010746.1 TIGRFAM: CTP synthase; KEGG: pla:Plav_3156 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_004010747.1 KEGG: preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004010748.1 KEGG: isochorismatase; PFAM: isochorismatase hydrolase YP_004010749.1 KEGG: cre:CHLREDRAFT_37866 histone methyltransferase YP_004010750.1 TIGRFAM: triosephosphate isomerase; KEGG: ara:Arad_8178 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004010751.1 KEGG: mno:Mnod_5572 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004010752.1 TIGRFAM: anthranilate synthase component I; KEGG: xau:Xaut_4378 anthranilate synthase component I; PFAM: chorismate binding-like; anthranilate synthase component I domain protein YP_004010753.1 PFAM: phosphoglycerate mutase; KEGG: swi:Swit_3559 phosphohistidine phosphatase, SixA YP_004010754.1 KEGG: xau:Xaut_4377 glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004010755.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: rpb:RPB_2797 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_004010756.1 KEGG: pla:Plav_3173 indole-3-glycerol-phosphate synthase; PFAM: indole-3-glycerol phosphate synthase YP_004010757.1 KEGG: avi:Avi_2568 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_004010758.1 PFAM: cell wall hydrolase SleB; KEGG: msl:Msil_1116 cell wall hydrolase SleB YP_004010759.1 PFAM: ArgK protein; KEGG: mag:amb1534 periplasmic protein kinase ArgK YP_004010760.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: pyruvate, phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_004010761.1 KEGG: dwi:Dwil_GK12716 GK12716 gene product from transcript GK12716-RA YP_004010762.1 KEGG: alv:Alvin_1680 hypothetical protein YP_004010763.1 KEGG: rpc:RPC_3619 hypothetical protein YP_004010764.1 KEGG: rru:Rru_A2796 heavy metal translocatin P-type ATPase; TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase YP_004010765.1 KEGG: ppg:PputGB1_1966 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004010766.1 KEGG: azc:AZC_3162 ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_004010767.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: azc:AZC_3161 alkanesulfonate transport system permease YP_004010768.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpe:RPE_4909 hypothetical protein YP_004010769.1 KEGG: met:M446_5709 hypothetical protein YP_004010770.1 KEGG: cel:F46F11.1 hypothetical protein YP_004010771.1 KEGG: AOT6; amino acid transporter YP_004010772.1 KEGG: hypothetical protein YP_004010773.1 PFAM: heat shock protein DnaJ domain protein; KEGG: heat shock protein DnaJ domain protein YP_004010774.1 TIGRFAM: capsular exopolysaccharide family; KEGG: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_004010775.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: polysaccharide export protein YP_004010776.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004010777.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_4819 IS66 Orf2 family protein YP_004010778.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004010779.1 PFAM: O-antigen polymerase; KEGG: hypothetical protein YP_004010780.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004010781.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004010782.1 PFAM: IS66 Orf2 family protein; KEGG: ara:Arad_12478 transposase number 2 for insertion sequence YP_004010783.1 PFAM: sugar transferase; KEGG: cpb:Cphamn1_0384 sugar transferase YP_004010784.1 KEGG: tkm:TK90_2543 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004010785.1 PFAM: methyltransferase type 11; KEGG: ttr:Tter_0233 methyltransferase type 12 YP_004010786.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mlo:mlr7549 nucleotide sugar epimerase YP_004010787.1 TIGRFAM: methyltransferase FkbM family; KEGG: tel:tlr0241 hypothetical protein YP_004010788.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: bmj:BMULJ_04765 glutamine-hydrolysing asparagine synthase; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004010789.1 KEGG: aeh:Mlg_2340 hypothetical protein YP_004010790.1 KEGG: cbk:CLL_A1555 hypothetical protein YP_004010791.1 KEGG: hypothetical protein YP_004010792.1 KEGG: avn:Avin_30000 glycosyl transferase, group 1 family protein; manually curated; PFAM: glycosyl transferase group 1 YP_004010793.1 KEGG: abo:ABO_0921 hypothetical protein YP_004010794.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004010795.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_4609 IS66 Orf2 family protein YP_004010796.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004010797.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: tel:tll0236 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004010798.1 KEGG: tel:tlr0243 hypothetical protein YP_004010799.1 PFAM: glycosyl transferase group 1; KEGG: tel:tlr0242 glycosyltransferase YP_004010800.1 PFAM: glycosyl transferase family 2; KEGG: tel:tlr1346 hypothetical protein YP_004010801.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2 YP_004010802.1 PFAM: polysaccharide biosynthesis protein; KEGG: tel:tlr1345 hypothetical protein YP_004010803.1 KEGG: rfr:Rfer_0688 acetyltransferase YP_004010804.1 KEGG: tel:tlr1344 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004010805.1 PFAM: acyltransferase 3; KEGG: smd:Smed_1772 acyltransferase 3 YP_004010806.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: tel:tlr1344 aminotransferase YP_004010807.1 PFAM: WxcM-like domain-containing protein; transferase hexapeptide repeat containing protein; KEGG: rfr:Rfer_0690 WxcM-like YP_004010808.1 KEGG: sdl:Sdel_1782 hypothetical protein YP_004010809.1 PFAM: glycosyl transferase group 1; KEGG: family 2 glycosyl transferase YP_004010810.1 PFAM: methyltransferase type 11; KEGG: hch:HCH_04637 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase YP_004010811.1 manually curated; PFAM: NGN domain-containing protein; KEGG: rsq:Rsph17025_4091 hypothetical protein; SMART: NGN domain-containing protein YP_004010812.1 PFAM: glycosyl transferase group 1; KEGG: net:Neut_2112 glycosyl transferase, group 1 YP_004010813.1 KEGG: sbp:Sbal223_1477 hypothetical protein YP_004010814.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004010815.1 KEGG: hne:HNE_2877 hypothetical protein YP_004010816.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: tkm:TK90_2543 nucleotide sugar dehydrogenase YP_004010817.1 PFAM: sugar transferase; KEGG: cpb:Cphamn1_0384 sugar transferase YP_004010820.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: swi:Swit_3970 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004010821.1 KEGG: spu:594198 hypothetical LOC594198 YP_004010822.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: sal:Sala_0591 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004010823.1 KEGG: azl:AZL_006350 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS YP_004010824.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bid:Bind_3122 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004010825.1 PFAM: protein of unknown function DUF1476; KEGG: bbt:BBta_5410 hypothetical protein YP_004010826.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pla:Plav_2522 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004010827.1 PFAM: ferredoxin; KEGG: xau:Xaut_4124 ferredoxin YP_004010828.1 KEGG: rpe:RPE_1474 hypothetical protein YP_004010829.1 KEGG: scl:sce4619 hypothetical protein YP_004010830.1 KEGG: bja:blr1130 hypothetical protein YP_004010831.1 KEGG: rxy:Rxyl_2315 nitrile hydratase, alpha subunit; PFAM: nitrile hydratase alpha chain YP_004010832.1 KEGG: rxy:Rxyl_2314 ScnA-like protein YP_004010833.1 KEGG: dsh:Dshi_1847 hypothetical protein YP_004010834.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rpb:RPB_3873 6-pyruvoyl tetrahydropterin synthase YP_004010835.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: xau:Xaut_2478 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxine 5'-phosphate oxidase dimerisation-like YP_004010836.1 KEGG: pla:Plav_0786 short-chain dehydrogenase/reductase SDR; manually curated; PFAM: short-chain dehydrogenase/reductase SDR YP_004010837.1 KEGG: cre:CHLREDRAFT_147777 hypothetical protein YP_004010838.1 PFAM: phosphoglycerate mutase; KEGG: rle:RL1010 phosphoglycerate mutase YP_004010839.1 TIGRFAM: chorismate synthase; KEGG: rpd:RPD_1314 chorismate synthase; PFAM: chorismate synthase YP_004010840.1 KEGG: pla:Plav_0784 hypothetical protein YP_004010841.1 PFAM: Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: app:CAP2UW1_3348 male sterility domain protein YP_004010842.1 KEGG: app:CAP2UW1_3347 poly(hydroxyalkanoate) granule-associated protein; TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein YP_004010843.1 PFAM: patatin; KEGG: aha:AHA_2273 patatin family phospholipase YP_004010844.1 PFAM: regulatory protein TetR; KEGG: app:CAP2UW1_3345 TetR family transcriptional regulator YP_004010845.1 KEGG: app:CAP2UW1_3344 hypothetical protein YP_004010846.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: mch:Mchl_5143 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_004010847.1 PFAM: glycosyl transferase group 1; KEGG: hne:HNE_0029 glycosyl transferase, group 1 family protein YP_004010848.1 KEGG: bbt:BBta_1556 manganese/divalent cation transport protein; TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004010849.1 KEGG: mno:Mnod_3626 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_004010850.1 KEGG: protein-tyrosine-phosphatase; PFAM: PHP domain protein YP_004010851.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: polysaccharide export protein YP_004010853.1 KEGG: mpo:Mpop_0501 hypothetical protein YP_004010854.1 KEGG: azo:azo1513 hydrolase YP_004010855.1 KEGG: rru:Rru_A3334 ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_004010856.1 PFAM: HI0933 family protein; KEGG: rpc:RPC_3087 HI0933-like protein YP_004010857.1 PFAM: NHL repeat containing protein; KEGG: pfl:PFL_4433 L-sorbosone dehydrogenase YP_004010858.1 manually curated; TIGRFAM: ribosomal protein L34; KEGG: xfn:XfasM23_2226 50S ribosomal protein L34; PFAM: ribosomal protein L34 YP_004010859.1 TIGRFAM: ribonuclease P protein component; KEGG: bbt:BBta_7325 ribonuclease P protein component YP_004010860.1 KEGG: xau:Xaut_1921 inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: hypothetical protein YP_004010861.1 KEGG: sal:Sala_0003 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004010862.1 KEGG: mbr:MONBRDRAFT_13061 hypothetical protein YP_004010863.1 KEGG: bja:blr5448 hypothetical protein YP_004010864.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: rle:RL0184 penicillin-insensitive murein endopeptidase YP_004010865.1 KEGG: hypothetical protein YP_004010866.1 KEGG: asa:ASA_2036 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089 YP_004010867.1 KEGG: app:CAP2UW1_2233 hypothetical protein YP_004010868.1 KEGG: mcc:717305 similar to paraneoplastic antigen MA2 YP_004010869.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: oan:Oant_2950 MerR family transcriptional regulator; SMART: regulatory protein MerR YP_004010870.1 KEGG: isc:IscW_ISCW022546 nucleolar RNA-associated protein YP_004010871.1 KEGG: rpd:RPD_3140 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004010872.1 PFAM: acriflavin resistance protein; KEGG: rpd:RPD_3139 acriflavin resistance protein YP_004010873.1 PFAM: periplasmic binding protein; KEGG: avn:Avin_00450 ABC transporter periplasmic binding protein YP_004010874.1 KEGG: avn:Avin_00460 hypothetical protein YP_004010875.1 PFAM: cobalamin synthesis protein P47K; KEGG: avn:Avin_00470 nickel incorporation protein YP_004010876.1 KEGG: avn:Avin_00480 ABC transporter ATP binding component; PFAM: ABC transporter; SMART: ATPase AAA YP_004010877.1 PFAM: periplasmic binding protein; KEGG: avn:Avin_00450 ABC transporter periplasmic binding protein YP_004010878.1 PFAM: transporter permease; KEGG: nwi:Nwi_2075 ABC-type Fe3+-siderophore transporter permease YP_004010879.1 KEGG: oca:OCAR_4561 iron compound ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase YP_004010880.1 KEGG: oca:OCAR_4562 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004010881.1 KEGG: mno:Mnod_3106 hypothetical protein YP_004010882.1 PFAM: nitroreductase; KEGG: rpa:RPA1392 nitroreductase family proteins YP_004010883.1 KEGG: rpa:RPA1391 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004010884.1 PFAM: cobalamin synthesis protein P47K; KEGG: rpa:RPA1390 hypothetical protein YP_004010885.1 KEGG: rpa:RPA1389 hypothetical protein YP_004010886.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpa:RPA1371 vanadium nitrogenase protein YP_004010887.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: rpa:RPA1372 nitrogenase cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1 YP_004010888.1 TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; KEGG: rpa:RPA1373 nitrogenase cofactor synthesis protein; PFAM: oxidoreductase/nitrogenase component 1 YP_004010889.1 KEGG: cre:CHLREDRAFT_153969 hypothetical protein YP_004010890.1 KEGG: rpa:RPA1374 sigma-54 dependent, vanadium nitrogenase transcriptional regulator, VnfA; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; ATPase AAA YP_004010891.1 KEGG: rpa:RPA1375 hypothetical protein YP_004010892.1 KEGG: avn:Avin_02530 hypothetical protein YP_004010893.1 KEGG: rpa:RPA1377 glyoxalase; TIGRFAM: lactoylglutathione lyase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_004010894.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpa:RPA1377 glyoxalase YP_004010895.1 KEGG: rpa:RPA1378 nitrogenase vanadium-iron protein alpha chain; TIGRFAM: nitrogenase vanadium-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004010896.1 TIGRFAM: V-containing nitrogenase, subunit delta; KEGG: rpa:RPA1379 vanadium dinitrogenase subunit delta; PFAM: Vanadium/alternative nitrogenase subunit delta YP_004010897.1 KEGG: rpa:RPA1380 nitrogenase vanadium-iron protein, VnfK subunit; PFAM: oxidoreductase/nitrogenase component 1 YP_004010898.1 KEGG: rpa:RPA1381 hypothetical protein YP_004010899.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpa:RPA1382 nitrogen fixation-related protein YP_004010900.1 KEGG: rpa:RPA1384 phosphate permease of ATP-dependent phosphate uptake system; TIGRFAM: phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_004010901.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: rpa:RPA1385 phosphonate transport system substrate-binding protein YP_004010902.1 KEGG: rpa:RPA1386 ATP-binding component of ABC phosphonate transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_004010903.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: azc:AZC_1016 NAD dependent epimerase YP_004010904.1 PFAM: glutathione S-transferase domain; KEGG: mno:Mnod_5423 glutathione S-transferase domain protein YP_004010905.1 PFAM: hypothetical protein; KEGG: oan:Oant_1337 hypothetical protein YP_004010906.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase family protein YP_004010907.1 KEGG: nha:Nham_0078 hypothetical protein YP_004010908.1 PFAM: glycosyl transferase group 1; KEGG: mpo:Mpop_1613 glycosyl transferase group 1 YP_004010909.1 KEGG: xau:Xaut_1937 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_004010910.1 KEGG: pla:Plav_0191 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004010911.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_0172 PTS IIA-like nitrogen-regulatory protein PtsN YP_004010912.1 KEGG: mlo:mlr0120 hypothetical protein YP_004010913.1 KEGG: ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_004010914.1 SMART: ATPase AAA; TIGRFAM: magnesium chelatase ATPase subunit I; KEGG: rpc:RPC_1250 magnesium chelatase ATPase I; PFAM: magnesium chelatase ChlI subunit YP_004010915.1 KEGG: rce:RC1_2082 magnesium chelatase subunit D; PFAM: von Willebrand factor A; SMART: von Willebrand factor A YP_004010916.1 KEGG: bra:BRADO1609 alpha/beta hydrolase, protoporphyrin IX magnesium chelatase BchO-like; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold YP_004010917.1 KEGG: hip:CGSHiEE_09100 large-conductance mechanosensitive channel YP_004010918.1 PFAM: hypothetical protein; KEGG: bid:Bind_0857 hypotheticalprotein YP_004010919.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: mpo:Mpop_3302 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004010920.1 manually curated; KEGG: oan:Oant_4041 hypothetical protein YP_004010921.1 KEGG: ncr:NCU04252 similar to sly1 protein YP_004010922.1 PFAM: ROK family protein; KEGG: rce:RC1_0837 ROK family protein YP_004010923.1 KEGG: pla:Plav_3236 carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031 YP_004010924.1 KEGG: cms:CMS_2843 heme synthetase YP_004010925.1 PFAM: nitrogen regulatory protein P-II; KEGG: pla:Plav_3243 nitrogen regulatory protein P-II YP_004010926.1 KEGG: ara:Arad_2372 glutamine synthetase protein; TIGRFAM: glutamine synthetase; PFAM: glutamine synthetase; glutamine synthetase beta-Grasp YP_004010927.1 PFAM: Uncharacterised conserved protein UCP032146; KEGG: rhi:NGR_c02250 hypothetical protein YP_004010928.1 TIGRFAM: histidinol dehydrogenase; KEGG: sme:SMc02307 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004010929.1 KEGG: met:M446_2639 hypothetical protein YP_004010930.1 KEGG: atc:AGR_C_953 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004010931.1 KEGG: mes:Meso_0193 hypothetical protein YP_004010932.1 KEGG: rfr:Rfer_2818 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_004010933.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pfo:Pfl01_3946 short-chain dehydrogenase/reductase SDR YP_004010934.1 KEGG: cpb:Cphamn1_0145 hypothetical protein YP_004010935.1 PFAM: sterol-binding domain protein; KEGG: hoh:Hoch_3088 sterol-binding domain protein YP_004010936.1 KEGG: rfr:Rfer_2820 MerR family transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_004010937.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rce:RC1_1744 3-ketoacyl-CoA thiolase; PFAM: thiolase-like YP_004010938.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_1743 fatty acid oxidation complex subunit alpha YP_004010939.1 KEGG: mrd:Mrad2831_4738 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004010940.1 PFAM: OmpW family protein; KEGG: bbt:BBta_0946 outer membrane protein precursor of unknown function YP_004010941.1 TIGRFAM: serine O-acetyltransferase; KEGG: bid:Bind_0211 serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004010942.1 KEGG: bra:BRADO3457 Zn-ribbon-containing protein involved in phosphonate metabolism, PhnA-like protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_004010943.1 KEGG: mex:Mext_2322 hypothetical protein YP_004010944.1 KEGG: mmr:Mmar10_2581 50S ribosomal protein L31P; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_004010945.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane proteins; PFAM: ABC transporter; ABC transporter transmembrane region; KEGG: oca:OCAR_7320 ABC transporter permease/ATP-binding protein; SMART: ATPase AAA YP_004010946.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: bid:Bind_1231 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA YP_004010947.1 PFAM: acriflavin resistance protein; ribosomal protein S19/S15; KEGG: bid:Bind_2924 acriflavin resistance protein YP_004010948.1 PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein YP_004010949.1 KEGG: ara:Arad_4549 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004010950.1 PFAM: peptidoglycan-binding protein; KEGG: azc:AZC_1094 hypothetical protein YP_004010951.1 KEGG: azc:AZC_1092 hypothetical protein YP_004010952.1 KEGG: msl:Msil_3525 hypothetical protein YP_004010953.1 PFAM: protein of unknown function DUF1007; KEGG: rpe:RPE_4805 hypothetical protein YP_004010954.1 KEGG: rde:RD1_1739 hypothetical protein YP_004010955.1 KEGG: tmz:Tmz1t_3494 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004010956.1 PFAM: protein of unknown function DUF214; KEGG: rde:RD1_1737 peptide ABC transporter permease YP_004010957.1 KEGG: ilo:IL2266 hypothetical protein YP_004010958.1 PFAM: NnrS family protein; KEGG: rhi:NGR_c09940 membrane protein, NnrS-like protein YP_004010959.1 KEGG: smd:Smed_6276 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004010960.1 KEGG: xau:Xaut_1527 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004010961.1 PFAM: protein of unknown function DUF81; KEGG: azc:AZC_2081 hypothetical protein YP_004010962.1 KEGG: psp:PSPPH_3692 transporter YP_004010963.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpa:RPA1017 nitrogen fixation-related protein YP_004010964.1 KEGG: alv:Alvin_2496 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding YP_004010965.1 KEGG: rba:RB5979 signal peptide YP_004010966.1 KEGG: tgr:Tgr7_2197 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004010967.1 PFAM: polysulphide reductase NrfD; KEGG: tbd:Tbd_2474 molybdopterin oxidoreductase, membrane subunit YP_004010968.1 KEGG: aeh:Mlg_1663 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004010969.1 KEGG: mag:amb3376 Hdr-like menaquinol oxidoreductase cytochrome C subunit YP_004010970.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mag:amb3375 glutamate synthase (NADPH) small subunit YP_004010971.1 KEGG: alv:Alvin_1258 DsrK YP_004010972.1 PFAM: nitrate reductase subunit gamma; KEGG: aeh:Mlg_1659 nitrate reductase, subunit gamma YP_004010973.1 KEGG: mag:amb3372 dissimilatory sulfite reductase; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_004010974.1 KEGG: tgr:Tgr7_2189 sulfur relay protein TusB/DsrH; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein YP_004010975.1 KEGG: rma:Rmag_0867 DsrE family protein; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein YP_004010976.1 KEGG: tgr:Tgr7_2187 sulfur relay protein TusD/DsrE; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein YP_004010977.1 TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; KEGG: aeh:Mlg_1654 sulfite reductase, dissimilatory-type beta subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_004010978.1 TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; KEGG: alv:Alvin_1251 DsrA; PFAM: nitrite and sulphite reductase 4Fe-4S region YP_004010979.1 KEGG: alv:Alvin_1250 hypothetical protein YP_004010980.1 KEGG: tgr:Tgr7_0323 hypothetical protein YP_004010981.1 KEGG: slt:Slit_1672 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004010982.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sqr; sulfide:quinone oxidoreductase YP_004010983.1 KEGG: aeh:Mlg_2499 hypothetical protein YP_004010984.1 PFAM: SirA-like domain-containing protein; KEGG: alv:Alvin_2600 SirA family protein YP_004010985.1 KEGG: bxe:Bxe_C0016 hypothetical protein; PFAM: aminotransferase class I and II YP_004010986.1 KEGG: bxe:Bxe_C0018 seriplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004010987.1 PFAM: response regulator receiver; KEGG: reh:H16_A3132 response regulator containing an atypical phosphorylation pocket YP_004010988.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mes:Meso_2063 TonB-dependent receptor YP_004010989.1 KEGG: bvi:Bcep1808_5119 transglycosylase-associated protein YP_004010990.1 TIGRFAM: ribonuclease PH; KEGG: rpb:RPB_0425 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_004010991.1 TIGRFAM: pyruvate kinase; KEGG: nha:Nham_1218 pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_004010992.1 PFAM: protein of unknown function DUF1036; KEGG: rpb:RPB_1424 hypothetical protein YP_004010993.1 KEGG: hydroxypyruvate reductase; PFAM: MOFRL domain protein YP_004010994.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: oan:Oant_0431 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004010995.1 KEGG: mno:Mnod_0376 hypothetical protein YP_004010996.1 KEGG: tko:TK0044 flagella-related protein D, internal insertion YP_004010997.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: pla:Plav_2107 glyceraldehyde-3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004010998.1 KEGG: azl:AZL_009640 thiamine-phosphate pyrophosphorylase YP_004010999.1 KEGG: xau:Xaut_3079 Sel1 domain-containing protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004011000.1 KEGG: amt:Amet_3705 hypothetical protein YP_004011001.1 KEGG: msl:Msil_0820 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004011002.1 KEGG: pla:Plav_0736 hypothetical protein YP_004011003.1 PFAM: transcription factor CarD; KEGG: rpc:RPC_0548 CarD family transcriptional regulator YP_004011004.1 KEGG: oca:OCAR_4056 nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein) YP_004011005.1 KEGG: cti:RALTA_B1676 transporter (MFS family) YP_004011006.1 PFAM: glutathione S-transferase domain; KEGG: rso:RSc0992 glutathione S-transferase-like transmembrane protein YP_004011007.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cyn:Cyan7425_0352 short-chain dehydrogenase/reductase SDR YP_004011008.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: nwi:Nwi_0355 hypothetical protein; SMART: Ku domain protein YP_004011009.1 KEGG: mes:Meso_1150 ATP dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit YP_004011010.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_2814 exopolysaccharide regulatory protein YP_004011011.1 KEGG: scl:sce5713 cell division cycle protein 48-related protein; PFAM: ATPase AAA; SMART: ATPase AAA YP_004011012.1 PFAM: glycoside hydrolase; KEGG: dvl:Dvul_1003 glycoside hydrolase family 3 protein YP_004011013.1 KEGG: rpe:RPE_3894 cytochrome b561 YP_004011014.1 KEGG: rpc:RPC_4934 hypothetical protein YP_004011015.1 KEGG: rpc:RPC_4933 peptidase YP_004011016.1 KEGG: rpe:RPE_4899 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004011017.1 KEGG: rpc:RPC_4931 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004011018.1 PFAM: protein of unknown function DUF343; KEGG: hypothetical protein YP_004011019.1 KEGG: azc:AZC_4256 peptidase S16 protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 YP_004011020.1 KEGG: azc:AZC_4257 thioredoxin precursor; TIGRFAM: thioredoxin; PFAM: thioredoxin domain-containing protein YP_004011021.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_7375 colanic acid biosynthesis acetyltransferase WcaF YP_004011022.1 KEGG: rhi:NGR_c31300 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase YP_004011023.1 TIGRFAM: succinyl-CoA synthetase subunit beta; KEGG: pla:Plav_1452 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004011024.1 KEGG: rpd:RPD_0537 CopG-like DNA-binding YP_004011025.1 KEGG: rpd:RPD_0538 PilT protein-like; manually curated; PFAM: PilT protein domain protein YP_004011026.1 KEGG: pzu:PHZ_c0159 succinyl-CoA synthetase alpha-subunit; TIGRFAM: succinyl-CoA synthetase, subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding protein YP_004011027.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: xau:Xaut_0156 2-oxoglutarate dehydrogenase E1 component; PFAM: transketolase central region; dehydrogenase E1 component YP_004011028.1 KEGG: met:M446_2166 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004011029.1 KEGG: bbt:BBta_0398 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004011030.1 KEGG: pla:Plav_0115 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004011031.1 PFAM: PTS system fructose subfamily IIA component; KEGG: azc:AZC_4068 PTS system fructose subfamily IIA component YP_004011032.1 KEGG: pla:Plav_0113 HPr kinase YP_004011033.1 KEGG: oca:OCAR_7576 sensor protein ChvG; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004011034.1 KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004011035.1 KEGG: pla:Plav_0109 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_004011036.1 PFAM: glycosyl transferase family 39; KEGG: met:M446_5864 glycosyl transferase YP_004011037.1 KEGG: rle:RL2969 transmembrane protein YP_004011038.1 PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: rle:RL1311 hypothetical protein YP_004011039.1 PFAM: ribonuclease T2; KEGG: rpc:RPC_1400 ribonuclease T2 YP_004011040.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: mag:amb0241 pseudouridylate synthase; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004011041.1 PFAM: IstB domain protein ATP-binding protein; KEGG: bja:bll4999 transposase YP_004011042.1 KEGG: cme:CML135C probable CCR4-NOT transcription complex, subunit 3 YP_004011043.1 PFAM: Phasin; KEGG: mno:Mnod_5203 phasin YP_004011044.1 KEGG: met:M446_3667 ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004011045.1 KEGG: mch:Mchl_1972 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2 YP_004011046.1 KEGG: msl:Msil_2455 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004011047.1 PFAM: PfkB domain protein; KEGG: mlo:mll5335 hypothetical protein YP_004011048.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: rpa:RPA0343 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_004011049.1 KEGG: pla:Plav_3570 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase YP_004011050.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: mlo:mlr4642 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004011051.1 KEGG: saq:Sare_2550 binding-protein-dependent transport systems inner membrane component YP_004011052.1 KEGG: pla:Plav_1376 inorganic diphosphatase; PFAM: inorganic pyrophosphatase YP_004011053.1 KEGG: ecb:100060263 similar to Kinetochore-associated protein 1 (Rough deal homolog) (hRod) (HsROD) (Rod) YP_004011054.1 PFAM: protein of unknown function DUF28; KEGG: pla:Plav_2114 hypothetical protein YP_004011055.1 PFAM: protein of unknown function DUF156; KEGG: protein of unknown function DUF156 YP_004011056.1 KEGG: bcs:BCAN_A2186 phosphate transporter PhoU; TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein YP_004011057.1 KEGG: hne:HNE_0560 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase, class III; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_004011058.1 KEGG: bra:BRADO5461 hypothetical protein YP_004011059.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: radical SAM protein; KEGG: ara:Arad_8719 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_004011060.1 KEGG: rpb:RPB_3420 coenzyme PQQ synthesis D YP_004011061.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: xau:Xaut_1801 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain-containing protein YP_004011062.1 PFAM: ATP12 ATPase; KEGG: sjp:SJA_C1-15430 ATP synthase mitochondrial F1 complex assembly factor 2 YP_004011063.1 PFAM: Squalene/phytoene synthase; KEGG: mrd:Mrad2831_2279 squalene/phytoene synthase YP_004011064.1 PFAM: protein of unknown function DUF498; KEGG: tgr:Tgr7_1437 hypothetical protein YP_004011065.1 KEGG: rpa:RPA2830 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004011066.1 KEGG: rpd:RPD_2777 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004011067.1 KEGG: azl:AZL_014520 immunogenic membrane protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004011068.1 PFAM: protein of unknown function DUF815; KEGG: azc:AZC_1628 ATPase YP_004011069.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mdi:METDI1759 thioredoxin reductase YP_004011070.1 KEGG: lbc:LACBIDRAFT_306071 hypothetical protein YP_004011071.1 KEGG: pau:PA14_38300 transcriptional regulator; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004011072.1 PFAM: pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rce:RC1_3164 indolepyruvate ferredoxin oxidoreductase YP_004011073.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mno:Mnod_0289 acyl-CoA dehydrogenase domain protein YP_004011074.1 TIGRFAM: AbrB family transcriptional regulator; KEGG: gox:GOX2681 hypothetical protein YP_004011075.1 PFAM: PilT protein domain protein; KEGG: ava:Ava_1729 PilT protein-like YP_004011076.1 KEGG: nha:Nham_2125 propionyl-CoA carboxylase; PFAM: carboxyl transferase YP_004011077.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: rpt:Rpal_2809 carbamoyl-phosphate synthase L chain ATP-binding YP_004011078.1 PFAM: pyruvate carboxyltransferase; KEGG: azc:AZC_1996 hydroxymethylglutaryl-CoA lyase YP_004011079.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: azl:AZL_d04160 glutaryl-CoA dehydrogenase YP_004011080.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mag:amb1653 acyl-CoA transferase/carnitine dehydratase YP_004011081.1 KEGG: nfa:nfa26350 hypothetical protein YP_004011082.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: syg:sync_2452 hypothetical protein YP_004011083.1 KEGG: hne:HNE_3220 hypothetical protein YP_004011084.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_1795 hypothetical protein YP_004011085.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase family protein YP_004011086.1 KEGG: mbr:MONBRDRAFT_31826 hypothetical protein YP_004011087.1 KEGG: mmr:Mmar10_1110 hypothetical protein YP_004011088.1 KEGG: mmr:Mmar10_1109 hypothetical protein YP_004011089.1 KEGG: rce:RC1_0127 tRNA-dihydrouridine synthase B, TIGRFAM: hypothetical protein; PFAM: dihydrouridine synthase DuS YP_004011090.1 KEGG: tkm:TK90_2077 hypothetical protein YP_004011091.1 KEGG: pla:Plav_2392 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004011092.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004011093.1 KEGG: dac:Daci_2540 hypothetical protein YP_004011094.1 KEGG: bfu:BC1G_14355 hypothetical protein YP_004011095.1 PFAM: protein of unknown function DUF1328; KEGG: pat:Patl_4137 hypothetical protein YP_004011096.1 PFAM: metallophosphoesterase; KEGG: mpo:Mpop_4935 metallophosphoesterase YP_004011097.1 KEGG: rce:RC1_1351 diacylglycerol kinase catalytic domain protein, PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase YP_004011098.1 KEGG: mrd:Mrad2831_2937 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004011099.1 PFAM: protein of unknown function UCP012641; KEGG: azl:AZL_c00190 hypothetical protein YP_004011100.1 PFAM: K potassium transporter; KEGG: mag:amb0865 K+ transporter YP_004011101.1 KEGG: oca:OCAR_7084 hypothetical protein YP_004011102.1 KEGG: bra:BRADO1653 4-vinyl protochlorophyllide reductase; TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR YP_004011103.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM protein; KEGG: jan:Jann_3244 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004011104.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pfl:PFL_4115 ADP-ribosylglycohydrolase family protein YP_004011105.1 KEGG: mes:Meso_3349 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX YP_004011106.1 PFAM: alpha/beta hydrolase fold; KEGG: met:M446_0787 alpha/beta hydrolase fold YP_004011107.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: met:M446_6802 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_004011108.1 KEGG: mpo:Mpop_3357 NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004011109.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: pla:Plav_2913 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004011110.1 KEGG: pla:Plav_2912 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004011111.1 TIGRFAM: riboflavin synthase, subunit alpha; KEGG: rce:RC1_1339 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_004011112.1 KEGG: xau:Xaut_4278 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004011113.1 PFAM: ATP-cone domain protein; KEGG: ATP-cone domain protein YP_004011114.1 KEGG: rsp:RSP_0823 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004011115.1 KEGG: aba:acid345_2175 hypothetical protein YP_004011116.1 KEGG: mrd:Mrad2831_0720 lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_004011117.1 KEGG: aat:D11S_1317 lipoprotein HlpB YP_004011118.1 KEGG: mea:Mex_2p0417 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: extracellular endonuclease, subunit A YP_004011119.1 KEGG: mrd:Mrad2831_3462 hypothetical protein YP_004011120.1 KEGG: oca:OCAR_7340 hypothetical protein YP_004011121.1 PFAM: patatin; KEGG: nha:Nham_2273 patatin YP_004011122.1 PFAM: protein of unknown function DUF162; KEGG: xau:Xaut_1767 hypothetical protein YP_004011123.1 KEGG: mes:Meso_0368 iron-sulfur cluster binding protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162 YP_004011124.1 PFAM: ferritin; KEGG: scl:sce7884 Dps family DNA-binding ferritin-like protein YP_004011125.1 KEGG: slt:Slit_2662 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis protein; PFAM: molybdopterin binding domain YP_004011126.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: tmz:Tmz1t_2523 molybdopterin biosynthesis MoaE protein YP_004011127.1 KEGG: ter:Tery_2708 tetratricopeptide TPR_2 YP_004011128.1 KEGG: met:M446_4878 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_004011129.1 PFAM: hypothetical protein; KEGG: cak:Caul_3758 hypothetical protein YP_004011130.1 KEGG: bra:BRADO3198 CRP/FNR family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004011131.1 TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; KEGG: azl:AZL_c04850 ubiquinol-cytochrome C reductase iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain YP_004011132.1 KEGG: maq:Maqu_2053 hypothetical protein YP_004011133.1 PFAM: endoribonuclease L-PSP; KEGG: acr:Acry_3477 endoribonuclease L-PSP YP_004011134.1 KEGG: acr:Acry_3548 hypothetical protein YP_004011135.1 PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_1900 hypothetical protein YP_004011136.1 PFAM: YceI family protein; KEGG: rru:Rru_A3683 YceI YP_004011137.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain-containing protein; Haloacid dehalogenase domain protein hydrolase; KEGG: pzu:PHZ_c1055 heavy-metal transporting P-type ATPase; SMART: TRASH domain-containing protein YP_004011138.1 PFAM: silent information regulator protein Sir2; KEGG: rce:RC1_2898 NAD-dependent deacetylase YP_004011139.1 PFAM: methyltransferase type 11; KEGG: cak:Caul_2158 methyltransferase type 11 YP_004011140.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cag:Cagg_0860 short-chain dehydrogenase/reductase SDR YP_004011141.1 KEGG: ret:RHE_CH02265 ATP dependent RNA helicase protein; PFAM: DEAD/DEAH box helicase; helicase domain protein; SMART: DEAD-like helicase ; helicase YP_004011142.1 KEGG: met:M446_6293 hypothetical protein YP_004011143.1 PFAM: YdjC family protein; KEGG: mei:Msip34_1280 YdjC family protein YP_004011144.1 PFAM: GtrA family protein; KEGG: aav:Aave_0598 GtrA family protein YP_004011145.1 PFAM: glycosyl transferase family 2; KEGG: mms:mma_2834 hypothetical protein YP_004011146.1 PFAM: YceI family protein; KEGG: hba:Hbal_1165 cytochrome b561 YP_004011147.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xau:Xaut_4172 glyoxalase/bleomycin resistance protein/dioxygenase YP_004011148.1 KEGG: oan:Oant_1923 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004011149.1 PFAM: protein of unknown function DUF192; KEGG: bid:Bind_1551 hypothetical protein YP_004011150.1 KEGG: app:CAP2UW1_0645 hypothetical protein YP_004011151.1 KEGG: cak:Caul_4697 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_004011152.1 KEGG: pzu:PHZ_c0325 hydrolase, carbon-nitrogen family; TIGRFAM: N-carbamoylputrescine amidase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004011153.1 KEGG: bbt:BBta_7476 hypothetical protein YP_004011154.1 KEGG: bra:BRADO0852 hypothetical protein YP_004011155.1 PFAM: FAD linked oxidase; KEGG: rhi:NGR_c04820 FAD dependent oxidoreductase YP_004011156.1 KEGG: pla:Plav_0739 hypothetical protein YP_004011157.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: msl:Msil_1101 DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_004011158.1 KEGG: mno:Mnod_0691 folate-binding protein YgfZ; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel YP_004011159.1 PFAM: polysaccharide deacetylase; KEGG: nwi:Nwi_1710 polysaccharide deacetylase YP_004011160.1 KEGG: cak:Caul_3284 signal transduction protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein YP_004011161.1 KEGG: rlt:Rleg2_1411 periplasmic protein-like protein YP_004011162.1 KEGG: lch:Lcho_0081 GntR family transcriptional regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004011163.1 KEGG: sme:SMa0151 hypothetical protein; PFAM: Malonyl-CoA decarboxylase YP_004011164.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: azo:azo0691 metallopeptidase YP_004011165.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: xau:Xaut_4419 nucleotidyl transferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_004011166.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rpe:RPE_1936 cobalamin synthesis protein, P47K YP_004011167.1 KEGG: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_004011168.1 PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_0830 alpha/beta hydrolase fold YP_004011169.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpd:RPD_4197 LysR, substrate-binding YP_004011170.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rpd:RPD_4196 hypothetical protein YP_004011171.1 KEGG: cak:Caul_0619 hypothetical protein YP_004011172.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rru:Rru_A1406 two component CheB methylesterase; SMART: response regulator receiver YP_004011173.1 PFAM: MCP methyltransferase CheR-type; KEGG: rpe:RPE_4670 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004011174.1 KEGG: rru:Rru_A1402 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004011175.1 KEGG: gsu:GSU0683 methyl-accepting chemotaxis protein, PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004011176.1 KEGG: azl:AZL_a08730 chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004011177.1 KEGG: mrd:Mrad2831_4815 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004011178.1 KEGG: rsh:Rsph17029_0235 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004011179.1 KEGG: mrd:Mrad2831_4813 anti-sigma-factor antagonist YP_004011180.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004011181.1 PFAM: sporulation domain-containing protein; KEGG: rhi:NGR_c13660 hypothetical protein YP_004011182.1 PFAM: peptidase S58 DmpA; KEGG: mno:Mnod_0972 peptidase S58 DmpA YP_004011183.1 TIGRFAM: glutamate racemase; KEGG: rpc:RPC_1606 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004011184.1 KEGG: mno:Mnod_7577 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; adenylosuccinate lyase-like YP_004011185.1 KEGG: hch:HCH_01053 Zn-dependent alcohol dehydrogenase, class III YP_004011186.1 KEGG: mmr:Mmar10_0128 50S ribosomal protein L35P; TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35 YP_004011187.1 KEGG: mes:Meso_0674 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004011188.1 KEGG: msm:MSMEG_0193 N-acetylmuramic acid-6-phosphate etherase YP_004011189.1 KEGG: phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004011190.1 KEGG: azl:AZL_016620 ATP-dependent DNA helicase; PFAM: DEAD/DEAH box helicase; nucleic acid binding OB-fold tRNA/helicase-type; helicase; SMART: DEAD-like helicase ; helicase YP_004011191.1 PFAM: protein of unknown function DUF339; KEGG: azc:AZC_1220 hypothetical protein YP_004011192.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase; helicase domain protein; TRCF domain protein; KEGG: transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase YP_004011193.1 PFAM: acyltransferase 3; KEGG: bra:BRADO5246 acyltransferase YP_004011194.1 PFAM: extracellular ligand-binding receptor; KEGG: mes:Meso_3328 extracellular ligand-binding receptor YP_004011195.1 KEGG: mrd:Mrad2831_2253 hypothetical protein YP_004011196.1 KEGG: mes:Meso_3326 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011197.1 KEGG: ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011198.1 PFAM: inner-membrane translocator; KEGG: bja:blr5672 ABC transporter permease YP_004011199.1 PFAM: inner-membrane translocator; KEGG: mes:Meso_3323 inner-membrane translocator YP_004011200.1 KEGG: cak:Caul_2476 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004011201.1 PFAM: aminotransferase class-III; KEGG: rhi:NGR_b13490 glutamate-1-semialdehyde 2,1-aminomutase YP_004011202.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: swi:Swit_4528 non-specific protein-tyrosine kinase YP_004011203.1 KEGG: hypothetical protein YP_004011204.1 PFAM: glycoside hydrolase family 10; KEGG: syf:Synpcc7942_1400 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10 YP_004011205.1 PFAM: O-antigen polymerase; KEGG: mmb:Mmol_1790 O-antigen polymerase YP_004011206.1 KEGG: cja:CJA_0616 glycosyl transferase, , gt4J YP_004011207.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rhi:NGR_b13380 UDP-glucose 4-epimerase YP_004011208.1 PFAM: protein of unknown function DUF2172, aminopeptidase-like; KEGG: scb:SCAB_23491 hypothetical protein YP_004011209.1 KEGG: bra:BRADO4833 hypothetical protein YP_004011210.1 PFAM: glycosyl transferase group 1; KEGG: mmb:Mmol_1787 glycosyl transferase group 1 YP_004011211.1 KEGG: mlo:mlr6502 N-acetyl-mannosamine transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_004011212.1 KEGG: tgr:Tgr7_2378 hypothetical protein YP_004011213.1 KEGG: vpa:VPA1236 inner membrane protein YjeH YP_004011214.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: mno:Mnod_5609 polysaccharide export protein YP_004011215.1 KEGG: pla:Plav_1925 sugar transferase; TIGRFAM: undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_004011216.1 PFAM: glycosyl transferase family 2; KEGG: rce:RC1_3994 glycosyl transferase, group 2 family protein YP_004011217.1 PFAM: LmbE family protein; KEGG: bra:BRADO4834 deacetylase YP_004011218.1 KEGG: bov:BOV_A0382 nucleotidyltransferase family protein YP_004011219.1 PFAM: C-methyltransferase; methyltransferase domain protein; KEGG: rhi:NGR_b13420 methyltransferase YP_004011220.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; manually curated; KEGG: swi:Swit_4542 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_004011221.1 PFAM: protein of unknown function DUF1025; KEGG: rce:RC1_2998 hypothetical protein YP_004011223.1 PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; KEGG: nhl:Nhal_2075 protein of unknown function DUF1974 YP_004011224.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: dar:Daro_1547 3-hydroxyacyl-CoA dehydrogenase YP_004011225.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: maq:Maqu_2016 acetyl-CoA acetyltransferase; PFAM: thiolase-like YP_004011226.1 KEGG: mex:Mext_2325 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004011227.1 KEGG: kfl:Kfla_6652 hypothetical protein YP_004011228.1 PFAM: nucleoside diphosphate kinase; KEGG: azc:AZC_4155 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004011229.1 SMART: 3'-5' exonuclease; TIGRFAM: ribonuclease D; KEGG: mno:Mnod_5131 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_004011230.1 KEGG: bcs:BCAN_A0766 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004011231.1 PFAM: protein of unknown function DUF2254, membrane; KEGG: mex:Mext_1264 hypothetical protein YP_004011232.1 KEGG: fra:Francci3_1291 macrocin-O-methyltransferase YP_004011233.1 KEGG: azo:azo3704 hypothetical protein YP_004011234.1 KEGG: sse:Ssed_4421 molybdopterin oxidoreductase YP_004011235.1 KEGG: dba:Dbac_0959 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase YP_004011236.1 PFAM: fatty acid hydroxylase; KEGG: sal:Sala_3136 sterol desaturase YP_004011237.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; KEGG: bid:Bind_2163 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004011238.1 PFAM: thiazole biosynthesis protein; KEGG: bid:Bind_2164 thiazole biosynthesis protein YP_004011239.1 KEGG: rde:RD1_0748 thiamine biosynthesis protein ThiS, TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004011240.1 PFAM: FAD dependent oxidoreductase; KEGG: rpd:RPD_3428 glycine oxidase ThiO YP_004011241.1 KEGG: pla:Plav_2897 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_004011242.1 KEGG: rce:RC1_3167 threonine dehydratase; TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein YP_004011243.1 KEGG: mca:MCA0458 cysteine-rich repeat-containing protein YP_004011244.1 PFAM: protein of unknown function DUF2141; KEGG: ana:all5344 hypothetical protein YP_004011245.1 PFAM: integral membrane protein TerC; KEGG: dvl:Dvul_2384 integral membrane protein TerC YP_004011246.1 PFAM: beta-ketoacyl synthase; KEGG: sus:acid_0743 3-oxoacyl-[acyl-carrier-protein] synthase II YP_004011247.1 PFAM: phosphopantetheine-binding; KEGG: rru:Rru_A0044 acyl carrier protein YP_004011248.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rce:RC1_3673 long-chain-fatty-acid--CoA ligase YP_004011249.1 PFAM: protein of unknown function DUF421; KEGG: mea:Mex_2p1137 hypothetical protein YP_004011250.1 KEGG: pla:Plav_3121 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004011251.1 KEGG: pla:Plav_3337 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_004011252.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mno:Mnod_5836 permease YjgP/YjgQ family protein YP_004011253.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mrd:Mrad2831_0555 permease YjgP/YjgQ family protein YP_004011254.1 PFAM: organic solvent tolerance protein; OstA family protein; KEGG: organic solvent tolerance protein YP_004011255.1 KEGG: rpt:Rpal_3474 SurA domain YP_004011256.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bmr:BMI_I679 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: pyridoxal phosphate biosynthetic protein PdxA YP_004011257.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: dimethyladenosine transferase; SMART: ribosomal RNA adenine methylase transferase-like YP_004011258.1 KEGG: cel:T04D1.4 Temporarily Assigned Gene name YP_004011259.1 KEGG: mag:amb2171 rhodanese-related sulfurtransferase; PFAM: rhodanese; SMART: Rhodanese domain protein YP_004011260.1 KEGG: rpb:RPB_4302 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004011261.1 KEGG: bja:bll5770 hypothetical protein; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase YP_004011262.1 KEGG: rle:RL4485 ferredoxin containing dehydrogenase YP_004011263.1 KEGG: dac:Daci_3344 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_004011264.1 KEGG: sml:Smlt2909 L-lactate dehydrogenase operon regulator; PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004011265.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: smt:Smal_2360 FMN-dependent alpha-hydroxy acid dehydrogenase YP_004011266.1 PFAM: HI0933 family protein; KEGG: gdj:Gdia_0499 HI0933 family protein YP_004011267.1 PFAM: Phasin; KEGG: mpo:Mpop_2492 phasin YP_004011268.1 KEGG: dvi:Dvir_GJ15967 GJ15967 gene product from transcript GJ15967-RA YP_004011269.1 KEGG: mno:Mnod_4447 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011270.1 KEGG: met:M446_3245 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011271.1 PFAM: extracellular ligand-binding receptor; KEGG: xau:Xaut_1437 extracellular ligand-binding receptor YP_004011272.1 PFAM: inner-membrane translocator; KEGG: oan:Oant_1399 inner-membrane translocator YP_004011273.1 PFAM: inner-membrane translocator; KEGG: mrd:Mrad2831_0059 inner-membrane translocator YP_004011274.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; KEGG: azl:AZL_a03000 hemolysin YP_004011275.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pla:Plav_2894 6-phosphogluconate dehydrogenase NAD-binding YP_004011276.1 KEGG: rpe:RPE_0855 hypothetical protein YP_004011277.1 manually curated; TIGRFAM: lytic murein transglycosylase; KEGG: xau:Xaut_3846 lytic murein transglycosylase; PFAM: peptidoglycan-binding protein YP_004011278.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: azc:AZC_4133 peptidase S41A protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004011279.1 KEGG: met:M446_0475 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004011280.1 KEGG: azc:AZC_1024 acetyl-CoA carboxylase carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: carboxyl transferase YP_004011281.1 TIGRFAM: tryptophan synthase, subunit alpha; KEGG: bja:blr0746 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_004011282.1 KEGG: pla:Plav_0143 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_004011283.1 KEGG: met:M446_2506 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004011284.1 KEGG: met:M446_2502 hypothetical protein YP_004011285.1 TIGRFAM: integration host factor subunit beta; PFAM: histone family protein DNA-binding protein; KEGG: rlg:Rleg_0059 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_004011286.1 KEGG: xau:Xaut_2220 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49 YP_004011287.1 KEGG: mes:Meso_3606 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_004011288.1 TIGRFAM: cytidylate kinase; KEGG: mch:Mchl_2406 cytidylate kinase; PFAM: cytidylate kinase region YP_004011289.1 KEGG: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004011290.1 PFAM: hypothetical protein; KEGG: mno:Mnod_7110 hypothetical protein YP_004011291.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mgi:Mflv_2124 alcohol dehydrogenase YP_004011292.1 PFAM: protein of unknown function DUF1150; KEGG: oca:OCAR_4463 hypothetical protein YP_004011293.1 PFAM: SlyX family protein; KEGG: atc:AGR_C_187 SlyX protein YP_004011294.1 KEGG: cbr:CBG02561 Hypothetical protein CBG02561 YP_004011295.1 KEGG: bbt:BBta_6523 TRAP-type uncharacterized transporter domain-containing protein YP_004011296.1 PFAM: metallophosphoesterase; KEGG: azl:AZL_a03810 protein phosphatase YP_004011297.1 KEGG: rpc:RPC_4252 hypothetical protein YP_004011298.1 PFAM: Uncharacterised conserved protein UCP033924; KEGG: nwi:Nwi_0516 hypothetical protein YP_004011299.1 PFAM: inositol monophosphatase; KEGG: bgl:bglu_2g09520 3'(2'),5'-bisphosphate nucleotidase YP_004011300.1 PFAM: protein of unknown function DUF2328; KEGG: mrd:Mrad2831_4036 hypothetical protein YP_004011301.1 KEGG: mno:Mnod_3620 flagellar export protein FliJ YP_004011302.1 KEGG: oca:OCAR_7111 cell cycle transcriptional regulator CtrA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004011303.1 PFAM: protein of unknown function DUF1674; KEGG: oca:OCAR_4334 hypothetical protein YP_004011304.1 KEGG: xau:Xaut_2136 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein YP_004011305.1 PFAM: glutathione S-transferase domain; KEGG: bxe:Bxe_B2940 glutathione S-transferase YP_004011306.1 KEGG: isc:IscW_ISCW018406 ankyrin 2,3/unc44 YP_004011307.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: atc:AGR_C_2038 guanylate kinase (GMP kinase); PFAM: guanylate kinase YP_004011308.1 PFAM: aminodeoxychorismate lyase; KEGG: sme:SMc00575 hypothetical protein YP_004011309.1 KEGG: smd:Smed_0747 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase YP_004011310.1 KEGG: mno:Mnod_2785 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004011311.1 KEGG: bid:Bind_2299 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004011312.1 KEGG: mag:amb2105 S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase YP_004011313.1 KEGG: mrd:Mrad2831_5421 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6, bacterial-like YP_004011314.1 KEGG: ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004011315.1 KEGG: xau:Xaut_3121 ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9-like YP_004011316.1 PFAM: acetyl-CoA hydrolase/transferase; manually curated; KEGG: rpd:RPD_0322 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase YP_004011317.1 PFAM: citrate transporter; TrkA-C domain protein; KEGG: pde:Pden_1777 citrate transporter YP_004011318.1 PFAM: protein of unknown function DUF2147; KEGG: met:M446_4354 hypothetical protein YP_004011319.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: mes:Meso_0987 replicative DNA helicase; SMART: ATPase AAA YP_004011320.1 TIGRFAM: alanine racemase; KEGG: alanine racemase; PFAM: alanine racemase domain protein YP_004011321.1 KEGG: mlo:mll7835 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA YP_004011322.1 PFAM: colicin V production protein; KEGG: nwi:Nwi_2016 colicin V production protein YP_004011323.1 KEGG: rpb:RPB_2452 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004011324.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_2312 short-chain dehydrogenase/reductase SDR YP_004011325.1 KEGG: lwe:lwe0009 spermidine N1-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004011326.1 PFAM: protein of unknown function DUF482; KEGG: nha:Nham_1027 hypothetical protein YP_004011327.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: azl:AZL_a02990 exopolysaccharide synthesis YP_004011328.1 KEGG: avi:Avi_1373 two component sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004011329.1 KEGG: aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase YP_004011330.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: rpt:Rpal_1289 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004011331.1 PFAM: cupin; KEGG: mlo:mlr1626 hypothetical protein YP_004011332.1 KEGG: nha:Nham_3522 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_004011333.1 PFAM: extracellular solute-binding protein, family 7; KEGG: TRAP dicarboxylate transporter DctP subunit YP_004011334.1 KEGG: ote:Oter_1678 hypothetical protein YP_004011335.1 KEGG: bja:bll5579 hypothetical protein YP_004011336.1 KEGG: cli:Clim_2385 OmpA/MotB domain protein YP_004011337.1 KEGG: nha:Nham_2298 hypothetical protein YP_004011338.1 KEGG: cpi:Cpin_7240 phenylalanyl-tRNA synthetase, beta subunit YP_004011339.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: reh:PHG001 membrane-bound [NiFe] hydrogenase small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004011340.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: azo:azo3787 ferredoxin hydrogenase, large chain YP_004011342.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: Ni/Fe-hydrogenase, b-type cytochrome subunit YP_004011343.1 KEGG: aeh:Mlg_2026 HyaD peptidase; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_004011344.1 KEGG: bbt:BBta_2000 hydrogenase expression/formation; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_004011345.1 PFAM: hydrogenase-1 expression HyaE; KEGG: avn:Avin_50540 hydrogenase expression/formation protein, HoxO YP_004011346.1 PFAM: HupH hydrogenase expression protein; KEGG: xau:Xaut_2179 HupH hydrogenase expression protein YP_004011347.1 KEGG: mgm:Mmc1_2497 Ni,Fe-hydrogenase I large subunit YP_004011348.1 KEGG: bja:bll6932 HypA protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_004011349.1 KEGG: dda:Dd703_2527 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_004011350.1 KEGG: tmz:Tmz1t_3924 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_004011351.1 KEGG: slt:Slit_2421 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_004011352.1 KEGG: alv:Alvin_2797 hydrogenase expression/formation protein HypE; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004011353.1 KEGG: mgm:Mmc1_2496 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004011354.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; hypothetical protein; KEGG: PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein YP_004011355.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: azl:AZL_a10680 nickel-dependent hydrogenase small subunit YP_004011356.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: azo:azo3808 ferredoxin hydrogenase, large subunit YP_004011357.1 KEGG: nhl:Nhal_1351 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase YP_004011358.1 KEGG: ara:Arad_4496 hypothetical protein YP_004011359.1 PFAM: protein of unknown function DUF1013; KEGG: met:M446_6075 hypothetical protein YP_004011360.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: mex:Mext_0662 aIF-2BI family translation initiation factor; PFAM: initiation factor 2B related YP_004011361.1 PFAM: protein of unknown function DUF1192; KEGG: azl:AZL_017350 hypothetical protein YP_004011362.1 TIGRFAM: photosynthetic complex assembly protein 2; KEGG: rru:Rru_A0614 hypothetical protein YP_004011363.1 KEGG: rce:RC1_2107 photosynthetic complex assembly protein PuhC YP_004011364.1 KEGG: rru:Rru_A0616 photosynthetic complex assembly protein YP_004011365.1 KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit ; PRC-barrel domain protein YP_004011366.1 PFAM: PUCC protein; KEGG: rpa:RPA1547 photosynthetic complex (LH1) assembly protein LhaA YP_004011367.1 TIGRFAM: magnesium protoporphyrin O-methyltransferase; KEGG: rce:RC1_2111 Mg-protoporphyrin IX methyl transferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein YP_004011368.1 TIGRFAM: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; KEGG: alv:Alvin_2639 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; PFAM: NifH/frxC-family protein YP_004011369.1 TIGRFAM: magnesium chelatase, H subunit; KEGG: rpt:Rpal_1732 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase YP_004011370.1 KEGG: bra:BRADO1640 light-independent protochlorophyllide reductase subunit B; TIGRFAM: light-independent protochlorophyllide reductase, subunit beta; PFAM: oxidoreductase/nitrogenase component 1; Proto-chlorophyllide reductase 57 kD subunit YP_004011371.1 TIGRFAM: light-independent protochlorophyllide reductase, N subunit; KEGG: met:M446_3718 light-independent protochlorophyllide reductase subunit N YP_004011372.1 KEGG: rpb:RPB_3982 2-vinyl bacteriochlorophyllide hydratase; TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase YP_004011373.1 manually curated; KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor YP_004011374.1 KEGG: rce:RC1_2118 transcriptional regulator CrtJ (homologous to PpsR); TIGRFAM: transcriptional regulator PpsR; PAS sensor protein; PFAM: helix-turn-helix Fis-type; hypothetical protein; PAS fold domain protein YP_004011375.1 KEGG: mch:Mchl_5287 bacteriochlorophyll/chlorophyll a synthase; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase YP_004011376.1 PFAM: PUCC protein; KEGG: met:M446_3713 PucC protein YP_004011377.1 KEGG: rce:RC1_2080 geranylgeranyl reductase BchP; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase YP_004011378.1 PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein YP_004011379.1 KEGG: mpo:Mpop_5369 hypothetical protein YP_004011380.1 PFAM: cytochrome C class I; KEGG: bid:Bind_0011 cytochrome c class I YP_004011381.1 TIGRFAM: thymidylate synthase; KEGG: tbd:Tbd_2040 thymidylate synthase; PFAM: thymidylate synthase YP_004011382.1 KEGG: bmr:BMI_I1409 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_004011383.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: azc:AZC_2569 HflK protein precursor; SMART: band 7 protein YP_004011384.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: xau:Xaut_1663 HflC protein; SMART: band 7 protein YP_004011385.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: mrd:Mrad2831_4529 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004011386.1 PFAM: protein of unknown function DUF37; KEGG: pla:Plav_2667 hypothetical protein YP_004011387.1 KEGG: amt:Amet_1598 hypothetical protein YP_004011388.1 KEGG: rpd:RPD_3337 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004011389.1 KEGG: rpd:RPD_3338 hypothetical protein YP_004011390.1 PFAM: acyltransferase 3; KEGG: xau:Xaut_4447 acyltransferase 3 YP_004011391.1 KEGG: cbd:CBUD_1472 CAAX amino terminal protease family; PFAM: cyclic nucleotide-binding; hypothetical protein; SMART: cyclic nucleotide-binding YP_004011392.1 KEGG: bid:Bind_2368 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; anticodon-binding domain protein YP_004011393.1 KEGG: pla:Plav_3045 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter YP_004011394.1 KEGG: pph:Ppha_1600 hypothetical protein YP_004011395.1 PFAM: DNA polymerase beta domain protein region; KEGG: rpd:RPD_1926 DNA polymerase, beta-like region YP_004011396.1 PFAM: protein of unknown function DUF86; KEGG: rce:RC1_2668 hypothetical protein YP_004011397.1 KEGG: ret:RHE_CH03018 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004011398.1 PFAM: Haemin-degrading family protein; KEGG: rce:RC1_3858 hemin transporter YP_004011399.1 PFAM: periplasmic binding protein; KEGG: rce:RC1_3859 hemin-binding periplasmic protein HmuT precursor YP_004011400.1 PFAM: transporter permease; KEGG: pla:Plav_0181 transporter permease YP_004011401.1 KEGG: rpc:RPC_1963 sigma-54 dependent trancsriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_004011402.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rpa:RPA1205 alcohol dehydrogenase YP_004011403.1 KEGG: met:M446_3953 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004011404.1 PFAM: alpha/beta hydrolase fold; KEGG: met:M446_6949 alpha/beta hydrolase fold YP_004011405.1 KEGG: sme:SMc02113 serine acetyltransferase protein; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004011406.1 KEGG: oca:OCAR_5519 hypothetical protein YP_004011407.1 KEGG: dsh:Dshi_1530 gamma-class carbonic anhydrase family protein YP_004011408.1 KEGG: mch:Mchl_2537 signal transduction protein with CBS domains; PFAM: hypothetical protein; SMART: hypothetical protein YP_004011409.1 PFAM: patatin; KEGG: bbt:BBta_5212 hypothetical protein YP_004011410.1 KEGG: sme:SMc01004 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004011411.1 TIGRFAM: GTP cyclohydrolase I; KEGG: hba:Hbal_2379 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_004011412.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: azc:AZC_0943 NifU-like protein YP_004011413.1 KEGG: pla:Plav_0221 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase subunit beta YP_004011414.1 PFAM: protein of unknown function DUF323; KEGG: amr:AM1_G0021 hypothetical protein YP_004011415.1 KEGG: oan:Oant_2691 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_004011416.1 PFAM: DSBA oxidoreductase; KEGG: xau:Xaut_1073 DsbA oxidoreductase YP_004011417.1 PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_3623 alpha/beta hydrolase fold YP_004011418.1 KEGG: rde:RD1_2485 hypothetical protein YP_004011419.1 KEGG: jan:Jann_1998 hypothetical protein YP_004011420.1 KEGG: bcv:Bcav_1345 glycogen debranching enzyme GlgX YP_004011421.1 KEGG: pop:POPTR_202005 hypothetical protein YP_004011422.1 KEGG: cwo:Cwoe_3829 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004011423.1 KEGG: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004011424.1 PFAM: protein of unknown function DUF927; KEGG: esa:ESA_03018 hypothetical protein YP_004011425.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004011426.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rlg:Rleg_0654 LysR family transcriptional regulator YP_004011427.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bid:Bind_1770 alcohol dehydrogenase YP_004011428.1 PFAM: alcohol dehydrogenase GroES domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; alcohol dehydrogenase zinc-binding domain protein; KEGG: ank:AnaeK_3351 alcohol dehydrogenase GroES domain protein YP_004011429.1 KEGG: ade:Adeh_3216 NAD-dependent epimerase/dehydratase YP_004011430.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain (glucose/xylose) dehydrogenase YP_004011431.1 PFAM: cupin; KEGG: ddr:Deide_3p00870 hypothetical protein YP_004011432.1 PFAM: aldo/keto reductase; KEGG: bid:Bind_1767 aldo/keto reductase YP_004011433.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3902 short-chain dehydrogenase/reductase SDR YP_004011434.1 KEGG: ara:Arad_7425 drug transporter protein; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004011435.1 PFAM: carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: smd:Smed_4453 carboxymuconolactone decarboxylase YP_004011436.1 manually curated; KEGG: rpe:RPE_2346 hypothetical protein YP_004011437.1 KEGG: rmu:RMDY18_09610 methyl-accepting chemotaxis protein YP_004011438.1 PFAM: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_004011439.1 PFAM: protein of unknown function DUF81; KEGG: tgr:Tgr7_2424 protein of unknown function DUF81 YP_004011440.1 PFAM: protein of unknown function DUF81; KEGG: hha:Hhal_2333 hypothetical protein YP_004011441.1 PFAM: conjugation TrbI family protein; KEGG: net:Neut_2539 conjugation TrbI family protein YP_004011442.1 KEGG: eba:p2B6 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004011443.1 KEGG: hna:Hneap_1665 conjugal transfer protein YP_004011444.1 KEGG: bmr:BMI_II361 P-type conjugative transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004011445.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: kpe:KPK_1290 P-type conjugative transfer protein TrbJ YP_004011446.1 KEGG: net:Neut_2552 CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: ATPase AAA YP_004011447.1 KEGG: net:Neut_2553 conjugal transfer protein TrbD YP_004011448.1 PFAM: Conjugal transfer protein TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC YP_004011449.1 KEGG: net:Neut_2555 type II secretion system protein E; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_004011450.1 KEGG: xfa:XFa0001 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004011451.1 KEGG: nwi:Nwi_0837 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1778 YP_004011452.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpt:Rpal_1884 GCN5-related N-acetyltransferase YP_004011453.1 PFAM: peptidase S26, conserved region; KEGG: app:CAP2UW1_4642 hypothetical protein YP_004011454.1 PFAM: TRAG family protein; KEGG: ajs:Ajs_4317 conjugal transfer coupling protein TraG YP_004011455.1 KEGG: bxe:Bxe_C0464 hypothetical protein YP_004011456.1 KEGG: acr:Acry_0517 sulfotransferase YP_004011457.1 KEGG: rop:ROP_42010 arylsulfatase YP_004011458.1 KEGG: drt:Dret_1867 hypothetical protein YP_004011459.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: nhl:Nhal_1813 NADH/ubiquinone/plastoquinone (complex I) YP_004011460.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sfr:Sfri_2742 NADH dehydrogenase (quinone) YP_004011461.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sfr:Sfri_2741 NADH dehydrogenase (quinone) YP_004011462.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sse:Ssed_1396 NADH-ubiquinone oxidoreductase, chain 4L YP_004011463.1 PFAM: Na+/H+ antiporter Mnhsubunit beta-related protein; KEGG: tkm:TK90_1003 Na+/H+ antiporter Mnhsubunit beta-related protein YP_004011464.1 KEGG: sfr:Sfri_2737 monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit YP_004011465.1 PFAM: multiple resistance and pH regulation protein F; KEGG: sfr:Sfri_2736 multiple resistance and pH regulation protein F YP_004011466.1 PFAM: UspA domain-containing protein; KEGG: sse:Ssed_1391 universal stress protein, UspA YP_004011467.1 PFAM: cation antiporter; KEGG: sse:Ssed_1390 cation antiporter YP_004011468.1 KEGG: bmv:BMASAVP1_0867 RemN protein YP_004011469.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; KEGG: gbe:GbCGDNIH1_1100 nitroreductase family protein; PFAM: nitroreductase YP_004011470.1 PFAM: protein of unknown function DUF442; KEGG: bam:Bamb_1670 hypothetical protein YP_004011471.1 PFAM: protein of unknown function DUF442; KEGG: maq:Maqu_1495 hypothetical protein YP_004011472.1 SMART: hypothetical protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: rhi:NGR_c03770 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein YP_004011473.1 PFAM: protein of unknown function DUF486; KEGG: mab:MAB_0350 hypothetical protein YP_004011474.1 PFAM: protein of unknown function DUF442; KEGG: azl:AZL_c02370 protein tyrosine/serine phosphatase YP_004011475.1 KEGG: azl:AZL_012450 ATP-binding cassette subfamily B; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA YP_004011476.1 KEGG: SH3 type 3 domain protein YP_004011477.1 KEGG: mex:Mext_2963 hypothetical protein YP_004011478.1 KEGG: fno:Fnod_0504 HsdR family type I site-specific deoxyribonuclease YP_004011479.1 TIGRFAM: enolase; KEGG: enolase; PFAM: Enolase-like YP_004011480.1 KEGG: mno:Mnod_6745 ExsB protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_004011481.1 KEGG: fra:Francci3_3380 hypothetical protein YP_004011482.1 KEGG: sen:SACE_4355 transcription regulator ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004011483.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: pla:Plav_0432 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic YP_004011484.1 PFAM: protein of unknown function DUF952; KEGG: atc:AGR_C_860 hypothetical protein YP_004011485.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: avi:Avi_0586 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_004011486.1 KEGG: amu:Amuc_1078 hypothetical protein YP_004011487.1 PFAM: cobalbumin biosynthesis protein; KEGG: rce:RC1_0323 bifunctional adenosylcobalamin biosynthesis protein CobU YP_004011488.1 TIGRFAM: dethiobiotin synthase; KEGG: rpb:RPB_4343 dithiobiotin synthetase YP_004011489.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bra:BRADO5427 hypothetical protein YP_004011490.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: rpc:RPC_4475 transcriptional regulator NifA; SMART: GAF domain protein; ATPase AAA YP_004011491.1 PFAM: rubrerythrin; KEGG: rpt:Rpal_2138 hypothetical protein YP_004011492.1 KEGG: rpc:RPC_4445 ferredoxin like protein, FixX YP_004011493.1 KEGG: bid:Bind_0489 electron-transferring-flavoprotein dehydrogenase; PFAM: FAD dependent oxidoreductase YP_004011494.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: xau:Xaut_0141 electron transfer flavoprotein alpha/beta-subunit YP_004011495.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: rec:RHECIAT_PB0000268 electron transfer flavoprotein subunit beta YP_004011496.1 PFAM: nitrogen fixation protein NifW; KEGG: xau:Xaut_0152 nitrogen fixation protein NifW YP_004011497.1 KEGG: rpd:RPD_1086 alpha-isopropylmalate/homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase YP_004011498.1 PFAM: peptidase M50; KEGG: rpt:Rpal_3737 peptidase M50 YP_004011499.1 KEGG: glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004011500.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain YP_004011501.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; KEGG: rpc:RPC_0611 glucose-1-phosphate adenylyltransferase; PFAM: nucleotidyl transferase YP_004011502.1 KEGG: rpe:RPE_0800 glycogen/starch synthases, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004011503.1 TIGRFAM: glycogen debranching enzyme GlgX; 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain YP_004011504.1 PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: bxe:Bxe_A1856 myosin-cross-reactive antigen YP_004011505.1 PFAM: arsenate reductase; KEGG: arsenate reductase and related protein YP_004011506.1 KEGG: msl:Msil_0360 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004011507.1 PFAM: NUDIX hydrolase; KEGG: cai:Caci_0632 NUDIX hydrolase YP_004011508.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: UTP-GlnB uridylyltransferase, GlnD; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_004011509.1 KEGG: rpe:RPE_0086 transglutaminase domain-containing protein; PFAM: protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004011510.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: nar:Saro_1044 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004011511.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sit:TM1040_3559 hypothetical protein YP_004011512.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: azc:AZC_0992 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_004011513.1 KEGG: xau:Xaut_2468 porin YP_004011514.1 PFAM: transglycosylase; KEGG: rpe:RPE_3012 transglycosylase YP_004011515.1 KEGG: ptr:736334 hypothetical protein LOC736334 YP_004011516.1 TIGRFAM: alkylhydroperoxidase AhpD family; alkylhydroperoxidase like protein, AhpD family; KEGG: rpe:RPE_4514 alkylhydroperoxidase; PFAM: carboxymuconolactone decarboxylase YP_004011517.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: bmr:BMI_II702 alkyl hydroperoxide reductase C YP_004011518.1 PFAM: carboxyl transferase; KEGG: carboxyl transferase YP_004011519.1 KEGG: periplasmic protein thiol/disulfide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: redoxin YP_004011520.1 KEGG: bja:bsr0470 heme exporter protein D; TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_004011521.1 KEGG: mes:Meso_3360 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein YP_004011522.1 KEGG: pla:Plav_1405 heme exporter protein CcmB; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome C biogenesis protein CcmB YP_004011523.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: pla:Plav_1404 heme exporter protein CcmA; SMART: ATPase AAA YP_004011524.1 KEGG: xau:Xaut_3852 aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_004011525.1 KEGG: tbr:Tb10.389.1350 chaperone protein DnaJ YP_004011526.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pzu:PHZ_c0577 modification methylase YP_004011527.1 KEGG: bam:Bamb_4784 hypothetical protein YP_004011528.1 KEGG: hba:Hbal_2020 alpha-L-glutamate ligase, RimK family; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; protein of unknown function DUF785 YP_004011529.1 KEGG: smd:Smed_6320 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004011530.1 KEGG: asa:ASA_4004 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004011531.1 KEGG: isc:IscW_ISCW013772 homeobox domain YP_004011532.1 KEGG: bme:BMEII1115 hypothetical protein YP_004011533.1 PFAM: hypothetical protein; KEGG: rhi:NGR_b01410 probable adenylate class-3/4/guanylyl cyclase; SMART: Tetratricopeptide repeat YP_004011534.1 KEGG: neu:NE1296 cAMP-dependent protein kinase; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004011535.1 KEGG: mmr:Mmar10_0743 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004011536.1 PFAM: TspO/MBR family protein; KEGG: msl:Msil_2817 TspO and MBR like protein YP_004011537.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pla:Plav_2581 RNA methyltransferase YP_004011538.1 KEGG: eoj:ECO26_0224 ATP-dependent Clp proteinase ATP-binding chain YP_004011539.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004011540.1 PFAM: UspA domain-containing protein; KEGG: mes:Meso_4036 hypothetical protein YP_004011541.1 PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: mes:Meso_4037 nitrogen-fixing NifU-like YP_004011542.1 PFAM: nitroreductase; KEGG: bur:Bcep18194_B1060 hypothetical protein YP_004011543.1 PFAM: peptidase M22 glycoprotease; KEGG: met:M446_3393 peptidase M22 glycoprotease YP_004011544.1 KEGG: nwi:Nwi_0012 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004011545.1 KEGG: pla:Plav_3616 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004011546.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; KEGG: pla:Plav_3617 RNA modification protein; SMART: Elongator protein 3/MiaB/NifB YP_004011547.1 PFAM: PhoH family protein; KEGG: rlg:Rleg_0030 PhoH family protein YP_004011548.1 PFAM: protein of unknown function UPF0054; KEGG: azc:AZC_0010 hypothetical protein YP_004011549.1 KEGG: mrd:Mrad2831_0636 CBS domain-containing protein; manually curated; PFAM: hypothetical protein; transporter-associated region YP_004011550.1 PFAM: glycosyl transferase group 1; KEGG: mag:amb0148 hypothetical protein YP_004011551.1 PFAM: glycosyl transferase family 25; KEGG: mes:Meso_2114 glycosyl transferase YP_004011552.1 PFAM: ABC transporter; KEGG: rpc:RPC_2367 hypothetical protein YP_004011553.1 PFAM: ABC transporter; KEGG: rpc:RPC_2368 hypothetical protein YP_004011554.1 KEGG: rpc:RPC_2369 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011555.1 PFAM: secretion protein HlyD; KEGG: rpc:RPC_2370 secretion protein HlyD YP_004011556.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_0455 TetR family transcriptional regulator YP_004011557.1 KEGG: eba:ebA551 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; aldehyde dehydrogenase YP_004011558.1 PFAM: choloylglycine hydrolase; KEGG: syg:sync_1125 choloylglycine hydrolase YP_004011559.1 KEGG: bmr:BMI_I667 hypothetical protein YP_004011560.1 PFAM: lysine exporter (LYSE/YGGA); KEGG: pla:Plav_0754 lysine exporter protein LysE/YggA YP_004011561.1 PFAM: Heparinase II/III; KEGG: heparinase II/III family protein YP_004011562.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: met:M446_2965 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004011563.1 KEGG: porin YP_004011564.1 KEGG: rpc:RPC_4942 hypothetical protein YP_004011565.1 PFAM: protein of unknown function DUF541; KEGG: pla:Plav_2321 hypothetical protein YP_004011566.1 PFAM: LrgB family protein; KEGG: azl:AZL_022290 antiholin YP_004011567.1 PFAM: LrgA family protein; KEGG: app:CAP2UW1_0601 LrgA family protein YP_004011568.1 KEGG: sma:SAV_264 hypothetical protein YP_004011569.1 KEGG: oxidoreductase, FAD-binding protein YP_004011570.1 KEGG: mes:Meso_3166 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004011571.1 TIGRFAM: dihydropteroate synthase; KEGG: rce:RC1_1795 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004011572.1 KEGG: hmg:100198486 similar to MGC78858 protein YP_004011573.1 KEGG: tca:655901 hypothetical protein LOC655901 YP_004011574.1 KEGG: bra:BRADO6669 outer-membrane immunogenic protein precursor; secreted protein YP_004011575.1 KEGG: azl:AZL_a03250 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase YP_004011576.1 KEGG: ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_004011577.1 KEGG: bmr:BMI_I1866 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004011578.1 PFAM: glycoside hydrolase 15-related; KEGG: glucoamylase or related glycosyl hydrolase protein YP_004011579.1 KEGG: sde:Sde_2234 hypothetical protein YP_004011580.1 KEGG: mno:Mnod_7567 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004011581.1 KEGG: bte:BTH_II2250 hypothetical protein YP_004011582.1 PFAM: Primase 2; Bifunctional DNA primase/polymerase; KEGG: mag:amb0358 hypothetical protein YP_004011583.1 TIGRFAM: CRISPR-associated HD domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nwi:Nwi_1941 CRISPR-associated helicase Cas3 family protein protein; SMART: DEAD-like helicase YP_004011584.1 KEGG: Cas5 family CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5 YP_004011585.1 KEGG: nwi:Nwi_1939 CRISPR-associated Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133 YP_004011586.1 KEGG: nwi:Nwi_1938 CRISPR-associated Csh2 family protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801 YP_004011587.1 TIGRFAM: CRISPR-associated protein Cas4; KEGG: zmn:Za10_1902 CRISPR-associated protein Cas4 YP_004011588.1 KEGG: nwi:Nwi_1936 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_004011589.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: nwi:Nwi_1935 hypothetical protein YP_004011590.1 KEGG: pde:Pden_3013 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011591.1 PFAM: transporter permease; KEGG: pde:Pden_3012 transporter permease YP_004011592.1 PFAM: transporter permease; KEGG: pde:Pden_3011 transporter permease YP_004011593.1 PFAM: periplasmic binding protein; KEGG: pde:Pden_3010 periplasmic binding protein YP_004011594.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rru:Rru_A2312 TonB-dependent receptor YP_004011595.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein YP_004011596.1 KEGG: pha:PSHAa2702 cytochrome-c peroxidase; PFAM: Di-haem cytochrome C peroxidase YP_004011597.1 KEGG: TonB-dependent receptor plug domain-containing protein; manually curated; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain YP_004011598.1 KEGG: rpb:RPB_3477 hypothetical protein YP_004011599.1 KEGG: mdi:METDI1693 hypothetical protein YP_004011600.1 KEGG: mea:Mex_1p4764 hypothetical protein YP_004011601.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004011602.1 PFAM: FecR protein; KEGG: nwi:Nwi_1969 FecR protein YP_004011603.1 KEGG: rpa:RPA3282 RNA polymerase ECF-type sigma factor, FecI; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004011604.1 KEGG: bmt:BSUIS_A0564 hypothetical protein YP_004011605.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rsp:RSP_4069 caspase-1, P20 YP_004011606.1 KEGG: mag:amb4081 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004011607.1 PFAM: transposase IS4 family protein; KEGG: sal:Sala_0407 transposase, IS4 YP_004011608.1 KEGG: gox:GOX1471 transposase YP_004011609.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004011610.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_1266 transposase, IS4 YP_004011611.1 KEGG: sme:SMa1784 hypothetical protein YP_004011612.1 PFAM: peptidoglycan-binding protein; Sel1 domain protein repeat-containing protein; KEGG: geo:Geob_0947 Sel1 domain protein repeat-containing protein YP_004011613.1 KEGG: nml:Namu_2445 hypothetical protein YP_004011614.1 KEGG: tgo:TGME49_097740 hypothetical protein YP_004011615.1 KEGG: ara:Arad_4052 multidrug efflux transporter protein YP_004011616.1 KEGG: tps:THAPSDRAFT_268351 hypothetical protein YP_004011617.1 KEGG: rci:RCIX113 type II secretion system protein YP_004011618.1 KEGG: bbt:BBta_p0100 insertion sequence IS21-like; ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: ATPase AAA YP_004011619.1 PFAM: OmpA/MotB domain protein; KEGG: msl:Msil_2372 OmpA/MotB domain protein YP_004011620.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: rlg:Rleg_7210 peptidase C14 caspase catalytic subunit P20 YP_004011621.1 KEGG: ret:RHE_PE00131 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap YP_004011622.1 KEGG: rlg:Rleg_7212 proteinase inhibitor I4 serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin YP_004011623.1 PFAM: peptidase C14 caspase catalytic subunit p20; hypothetical protein; KEGG: mno:Mnod_2951 peptidase C14 caspase catalytic subunit P20 YP_004011624.1 PFAM: integrase family protein; KEGG: xau:Xaut_2233 integrase family protein YP_004011625.1 PFAM: peptidoglycan-binding protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mno:Mnod_5299 ErfK/YbiS/YcfS/YnhG family protein YP_004011626.1 KEGG: gvi:glr2490 hypothetical protein YP_004011627.1 KEGG: svi:Svir_24570 methylmalonyl-CoA mutase family protein YP_004011628.1 KEGG: rce:RC1_4043 hypothetical protein YP_004011629.1 PFAM: patatin; KEGG: met:M446_5259 patatin YP_004011630.1 PFAM: methyltransferase type 12; KEGG: rer:RER_25660 hypothetical protein YP_004011631.1 KEGG: mlo:mlr1181 hypothetical protein YP_004011632.1 PFAM: Sigma-70 region 4 type 2; KEGG: nar:Saro_1592 sigma-24 (FecI-like) YP_004011633.1 KEGG: atc:AGR_C_2736 hypothetical protein YP_004011634.1 KEGG: azl:AZL_a03620 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_004011635.1 KEGG: osa:4342474 hypothetical protein YP_004011636.1 KEGG: pde:Pden_2468 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004011637.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: azc:AZC_0350 hypothetical protein YP_004011638.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: azc:AZC_0350 hypothetical protein YP_004011639.1 PFAM: aminotransferase class I and II; KEGG: pla:Plav_2300 aspartate aminotransferase YP_004011640.1 KEGG: bbt:BBta_1187 methionine biosynthesis protein (MetW); TIGRFAM: methionine biosynthesis protein MetW; PFAM: methionine biosynthesis MetW protein YP_004011641.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: rce:RC1_4083 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_004011642.1 KEGG: abo:ABO_1168 hypothetical protein YP_004011643.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_1946 acyl-CoA dehydrogenase YP_004011644.1 PFAM: methyltransferase type 11; KEGG: min:Minf_0142 SAM-dependent methyltransferase YP_004011645.1 PFAM: protein of unknown function DUF482; KEGG: azc:AZC_2321 hypothetical protein YP_004011646.1 KEGG: met:M446_2182 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor YP_004011647.1 KEGG: bra:BRADO0114 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004011648.1 PFAM: OstA family protein; KEGG: rpt:Rpal_0049 OstA family protein YP_004011649.1 PFAM: protein of unknown function DUF1239; KEGG: hypothetical protein YP_004011650.1 KEGG: pla:Plav_0196 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease YP_004011651.1 KEGG: mea:Mex_1p5282 cytochrome C, exported protein; PFAM: cytochrome C class I YP_004011652.1 KEGG: asa:ASA_2083 CBS domain-containing protein YP_004011653.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004011654.1 PFAM: cytochrome C1; KEGG: azc:AZC_3499 cytochrome b/c1 precursor YP_004011655.1 PFAM: cytochrome b/b6 domain; KEGG: bid:Bind_0155 cytochrome b/b6 domain-containing protein YP_004011656.1 TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; KEGG: mlo:mll2707 ubiquinol-cytochrome C reductase iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain YP_004011657.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: met:M446_6224 tRNA/rRNA methyltransferase (SpoU) YP_004011658.1 KEGG: nha:Nham_3246 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_004011659.1 KEGG: bvi:Bcep1808_7334 hypothetical protein YP_004011660.1 TIGRFAM: integration host factor, subunit alpha; PFAM: histone family protein DNA-binding protein; KEGG: rha:RHA1_ro06501 DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004011661.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: rpe:RPE_2826 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004011662.1 KEGG: oca:OCAR_5875 glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_004011664.1 KEGG: rpd:RPD_2684 hypothetical protein YP_004011665.1 KEGG: xau:Xaut_4382 ubiquinol-cytochrome C chaperone YP_004011666.1 KEGG: msl:Msil_0656 SmpA/OmlA domain protein; manually curated; PFAM: SmpA/OmlA domain-containing protein YP_004011667.1 KEGG: pla:Plav_3330 hypothetical protein YP_004011668.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: mes:Meso_1966 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004011669.1 KEGG: mea:Mex_1p2044 phosphoribosylglycinamide formyltransferase 1; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase YP_004011670.1 KEGG: rsq:Rsph17025_0065 alkane 1-monooxygenase YP_004011671.1 KEGG: rpe:RPE_0742 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein YP_004011672.1 KEGG: rpt:Rpal_3836 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004011673.1 TIGRFAM: KpsF/GutQ family protein; KEGG: azc:AZC_0706 sugar isomerase; PFAM: sugar isomerase (SIS); hypothetical protein YP_004011674.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bid:Bind_0435 UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase YP_004011675.1 TIGRFAM: lytic murein transglycosylase; KEGG: psa:PST_3772 membrane-bound lytic murein transglycosylase YP_004011676.1 PFAM: protein of unknown function DUF459; KEGG: msl:Msil_3880 protein of unknown function DUF459 YP_004011677.1 KEGG: pla:Plav_1958 hypothetical protein YP_004011678.1 KEGG: ecb:100070948 similar to StAR-related lipid transfer protein 9 (StARD9) (START domain-containing protein 9) YP_004011679.1 KEGG: rhi:NGR_c13020 GTP-binding protein; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_004011680.1 KEGG: RNA chaperone Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004011681.1 PFAM: aminotransferase class IV; KEGG: aminotransferase class IV YP_004011682.1 KEGG: rpd:RPD_2592 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; ATPase AAA YP_004011683.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_4071 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004011684.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: rlt:Rleg2_1611 lipoyl synthase; PFAM: radical SAM domain protein YP_004011685.1 PFAM: cyclase/dehydrase; KEGG: mno:Mnod_6534 cyclase/dehydrase YP_004011686.1 PFAM: damage inducible protein CinA; KEGG: rhi:NGR_c12930 competence/damage-inducible protein CinA YP_004011687.1 KEGG: rce:RC1_0126 IspD; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004011688.1 KEGG: bid:Bind_1518 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004011689.1 KEGG: oca:OCAR_4794 hypothetical protein YP_004011690.1 KEGG: rce:RC1_0122 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004011691.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: rpb:RPB_2768 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_004011692.1 KEGG: azc:AZC_4258 chromosome segregation protein YP_004011693.1 PFAM: transketolase; biotin/lipoyl attachment domain-containing protein; transketolase domain-containing protein; KEGG: transketolase YP_004011695.1 TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; KEGG: bbt:BBta_4463 pyruvate dehydrogenase E1 component, subunit alpha; PFAM: dehydrogenase E1 component YP_004011696.1 PFAM: septum formation initiator; KEGG: azc:AZC_1740 septum formation initiator YP_004011697.1 KEGG: mgr:MGG_00540 hypothetical protein YP_004011698.1 KEGG: mbn:Mboo_1669 hypothetical protein YP_004011699.1 KEGG: avi:Avi_0082 hypothetical protein YP_004011700.1 KEGG: rpb:RPB_4121 peptidase C56, PfpI; TIGRFAM: intracellular protease PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_004011701.1 KEGG: amr:AM1_E0026 hypothetical protein YP_004011702.1 PFAM: NUDIX hydrolase; Appr-1-p processing domain protein; KEGG: fre:Franean1_5217 appr-1-p processing domain-containing protein YP_004011703.1 TIGRFAM: lipoate-protein ligase B; KEGG: rsq:Rsph17025_0665 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase YP_004011704.1 KEGG: rso:RS04795 alanin-rich signal peptide protein YP_004011705.1 KEGG: GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004011706.1 PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_2021 NADPH-dependent FMN reductase YP_004011707.1 PFAM: glutathione S-transferase domain; KEGG: pde:Pden_0332 glutathione S-transferase domain-containing protein YP_004011708.1 PFAM: regulatory protein LysR; KEGG: bid:Bind_0281 ModE family transcriptional regulator YP_004011709.1 KEGG: azc:AZC_0926 hypothetical protein YP_004011710.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: rpd:RPD_1381 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like YP_004011711.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: rpt:Rpal_4693 hypothetical protein YP_004011712.1 KEGG: oca:OCAR_7386 thiosulfate-binding protein; TIGRFAM: sulfate ABC transporter periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004011713.1 KEGG: azc:AZC_0921 sulfate transporter permease protein 2; TIGRFAM: sulfate ABC transporter inner membrane protein CysT; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004011714.1 KEGG: bbt:BBta_6975 sulfate/thiosulfate permease W; TIGRFAM: sulfate ABC transporter inner membrane protein CysW; sulfate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component YP_004011715.1 TIGRFAM: sulfate ABC transporter ATPase; PFAM: ABC transporter; KEGG: rpe:RPE_1771 sulfate transporter permease protein 1; SMART: ATPase AAA YP_004011716.1 KEGG: pap:PSPA7_1898 ATP-binding/permease fusion ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_004011717.1 PFAM: OmpA/MotB domain protein; KEGG: lch:Lcho_4359 OmpA/MotB domain-containing protein YP_004011718.1 PFAM: protein of unknown function DUF45; KEGG: bja:blr0909 hypothetical protein YP_004011719.1 KEGG: bja:blr5039 arginyl-tRNA-protein transferase; manually curated; PFAM: Arginine-tRNA-protein transferase domain protein YP_004011720.1 KEGG: pdi:BDI_1521 thiol:disulfide interchange protein YP_004011721.1 PFAM: MltA-interacting MipA family protein; KEGG: rpc:RPC_0793 MltA-interacting MipA YP_004011722.1 KEGG: tgr:Tgr7_1449 hypothetical protein YP_004011723.1 PFAM: integral membrane protein TerC; KEGG: bja:bll4584 hypothetical protein YP_004011724.1 KEGG: phosphatidylcholine synthase; PFAM: CDP-alcohol phosphatidyltransferase YP_004011725.1 KEGG: syf:Synpcc7942_0928 outer envelope membrane protein YP_004011726.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: met:M446_5355 CutA1 divalent ion tolerance protein YP_004011727.1 PFAM: ATP-NAD/AcoX kinase; KEGG: rpe:RPE_2359 inorganic polyphosphate/ATP-NAD kinase YP_004011728.1 KEGG: mlo:mlr6511 hypothetical protein YP_004011729.1 KEGG: oan:Oant_2153 hypothetical protein YP_004011730.1 PFAM: MHYT domain protein; KEGG: xca:xccb100_2207 sensor protein YP_004011731.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3265 hypothetical protein YP_004011732.1 PFAM: PilT protein domain protein; KEGG: PilT protein domain protein YP_004011733.1 TIGRFAM: prevent-host-death family protein; KEGG: prevent-host-death family protein YP_004011734.1 KEGG: Vimentin YP_004011735.1 PFAM: ABC transporter; KEGG: nha:Nham_2741 hypothetical protein YP_004011736.1 KEGG: mch:Mchl_0412 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004011737.1 SMART: ATPase AAA; KEGG: ATPase AAA YP_004011738.1 PFAM: polysaccharide deacetylase; KEGG: nwi:Nwi_1710 polysaccharide deacetylase YP_004011739.1 KEGG: alv:Alvin_0420 hypothetical protein YP_004011740.1 KEGG: gur:Gura_2446 PEP phosphonomutase and related enzymes-like protein YP_004011741.1 PFAM: protein of unknown function DUF2087; KEGG: rpb:RPB_2974 hypothetical protein YP_004011742.1 KEGG: rpe:RPE_3886 hypothetical protein YP_004011743.1 PFAM: glutamine amidotransferase class-I; KEGG: rpe:RPE_0838 glutamine amidotransferase class-I YP_004011744.1 manually curated; KEGG: rru:Rru_A1859 hypothetical protein YP_004011745.1 KEGG: xau:Xaut_2154 hypothetical protein YP_004011746.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: smd:Smed_2743 phosphoglucomutase YP_004011747.1 KEGG: azl:AZL_026620 DNA-binding two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004011748.1 KEGG: azl:AZL_026610 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004011749.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, subunit alpha; KEGG: rhi:NGR_c09480 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004011750.1 KEGG: xau:Xaut_3523 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold YP_004011751.1 KEGG: msl:Msil_1678 LexA repressor; TIGRFAM: LexA repressor; PFAM: peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein YP_004011752.1 KEGG: ote:Oter_3918 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004011753.1 KEGG: kfl:Kfla_5658 hypothetical protein YP_004011754.1 KEGG: svi:Svir_33390 biotin carboxylase YP_004011755.1 KEGG: afw:Anae109_0332 OPT family oligopeptide transporter; TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: oligopeptide transporter OPT superfamily protein YP_004011756.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: hau:Haur_2105 taurine catabolism dioxygenase TauD/TfdA YP_004011757.1 PFAM: extracellular solute-binding protein family 1; KEGG: extracellular solute-binding protein family 1 YP_004011758.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: binding-protein-dependent transporters inner membrane component YP_004011759.1 KEGG: tth:TTC1266 iron(III)-transport ATP-binding protein SfuC; PFAM: ABC transporter; transport-associated OB domain-containing protein; SMART: ATPase AAA YP_004011760.1 PFAM: filamentation induced by cAMP protein Fic; regulatory protein DeoR; KEGG: sal:Sala_2616 filamentation induced by cAMP protein Fic YP_004011761.1 PFAM: Abortive phage infection; KEGG: nmr:Nmar_1444 hypothetical protein YP_004011762.1 KEGG: vap:Vapar_2085 hypothetical protein YP_004011763.1 KEGG: olu:OSTLU_28747 predicted protein YP_004011764.1 PFAM: mobilisation protein; KEGG: bad:BAD_1270 hypothetical protein YP_004011765.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: mmr:Mmar10_2322 relaxase/mobilization nuclease family protein YP_004011766.1 PFAM: TRAG family protein; KEGG: sjp:SJA_P2-00410 conjugal transfer protein TraG YP_004011767.1 KEGG: acetyltransferase YP_004011768.1 KEGG: rme:Rmet_2778 cobyric acid synthase YP_004011769.1 PFAM: peptidase M48 Ste24p; KEGG: bra:BRADO6374 protease (heat shock protein) YP_004011770.1 PFAM: carbonic anhydrase; KEGG: nhl:Nhal_3058 carbonic anhydrase YP_004011771.1 KEGG: ptr:739166 hypothetical protein LOC739166 YP_004011772.1 KEGG: cfa:483749 zinc finger, HIT type 2 YP_004011773.1 KEGG: aga:AgaP_AGAP002610 AGAP002610-PA YP_004011774.1 KEGG: hypothetical protein YP_004011775.1 PFAM: N-6 DNA methylase; KEGG: rme:Rmet_6243 hypothetical protein YP_004011776.1 KEGG: fps:FP1559 hypothetical protein YP_004011777.1 PFAM: protein of unknown function DUF955; KEGG: dsh:Dshi_0050 protein of unknown function DUF955 YP_004011778.1 KEGG: mdi:METDI1403 hypothetical protein YP_004011779.1 PFAM: Domain of unknown function P63C; KEGG: dvm:DvMF_1646 phage protein YP_004011780.1 KEGG: cqu:CpipJ_CPIJ012377 histone H1 YP_004011781.1 KEGG: pgu:PGUG_00301 hypothetical protein YP_004011782.1 KEGG: pkn:PKH_141220 hypothetical protein YP_004011783.1 KEGG: rmu:RMDY18_09610 methyl-accepting chemotaxis protein YP_004011784.1 PFAM: helix-turn-helix domain protein; KEGG: bja:bsr8245 hypothetical protein YP_004011786.1 KEGG: mba:Mbar_A1826 hypothetical protein YP_004011787.1 KEGG: bja:bll2159 transposase YP_004011788.1 KEGG: rsq:Rsph17025_3725 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_004011789.1 PFAM: transposase IS3/IS911 family protein; KEGG: azl:AZL_f01430 transposase YP_004011790.1 PFAM: plasmid stabilization system; KEGG: plasmid stabilization system YP_004011791.1 KEGG: rle:pRL120267 plasmid stabilisation protein YP_004011792.1 KEGG: psp:PSPPH_0610 hypothetical protein YP_004011793.1 KEGG: mpl:Mpal_1096 hypothetical protein YP_004011794.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004011795.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004011796.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004011797.1 PFAM: domain of unknown function DUF1738; KEGG: xau:Xaut_0801 hypothetical protein YP_004011798.1 KEGG: aav:Aave_4521 hypothetical protein YP_004011799.1 KEGG: mmr:Mmar10_2113 S1/P1 nuclease; manually curated; PFAM: S1/P1 nuclease YP_004011800.1 KEGG: fsu:Fisuc_2038 radical SAM protein YP_004011801.1 TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: mpo:Mpop_5139 addiction module antidote protein, CopG/Arc/MetJ family YP_004011802.1 KEGG: bra:BRADO6403 hypothetical protein YP_004011803.1 KEGG: pjd:Pjdr2_1518 hypothetical protein YP_004011804.1 KEGG: nfa:nfa33710 short chain dehydrogenase YP_004011805.1 KEGG: tgu:100231494 similar to NK2 homeobox 8 YP_004011806.1 KEGG: mlo:mlr8507 hypothetical protein YP_004011807.1 KEGG: gym:GYMC10_5810 glycosyl transferase family 2 YP_004011808.1 KEGG: sil:SPO1068 hypothetical protein YP_004011809.1 KEGG: mrd:Mrad2831_6491 ParA protein YP_004011810.1 PFAM: plasmid encoded RepA protein; KEGG: met:M446_5948 plasmid encoded RepA protein YP_004011811.1 KEGG: ccs:CCNA_03627 probable ATP phosphoribosyltransferase regulatory subunit YP_004011812.1 KEGG: swi:Swit_2134 hypothetical protein YP_004011813.1 KEGG: amr:AM1_E0011 hypothetical protein YP_004011814.1 KEGG: pol:Bpro_1558 hypothetical protein YP_004011815.1 KEGG: pol:Bpro_1557 hypothetical protein YP_004011816.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: nar:Saro_3922 filamentation induced by cAMP protein Fic YP_004011817.1 KEGG: ure:UREG_00791 hypothetical protein YP_004011818.1 PFAM: integrase family protein; KEGG: pde:Pden_3122 phage integrase family protein YP_004011819.1 KEGG: scl:sce0608 hypothetical protein YP_004011820.1 KEGG: cme:CMT610C methylenetetrahydrofolate reductase YP_004011821.1 KEGG: dac:Daci_2276 XRE family transcriptional regulator YP_004011822.1 PFAM: HNH endonuclease; KEGG: bgl:bglu_1g15350 hypothetical protein YP_004011823.1 KEGG: hch:HCH_05691 hypothetical protein YP_004011824.1 KEGG: syf:Synpcc7942_0722 hypothetical protein YP_004011825.1 PFAM: YqaJ viral recombinase family; KEGG: mno:Mnod_2639 phage-related protein endonuclease-like protein YP_004011826.1 KEGG: psb:Psyr_4603 peptidase; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004011827.1 KEGG: mrd:Mrad2831_3797 hypothetical protein YP_004011828.1 KEGG: syf:Synpcc7942_0725 DEAD/DEAH box helicase-like; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase; DEAD-like helicase YP_004011829.1 KEGG: transposase IS116/IS110/IS902 family protein YP_004011830.1 PFAM: VRR-NUC domain-containing protein; KEGG: syf:Synpcc7942_0726 hypothetical protein YP_004011831.1 KEGG: pca:Pcar_1822 DNA primase YP_004011832.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004011833.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004011834.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004011835.1 KEGG: dze:Dd1591_4203 hypothetical protein; manually curated; SMART: HNH nuclease YP_004011836.1 manually curated; TIGRFAM: DNA mismatch endonuclease Vsr; KEGG: nha:Nham_2517 DNA mismatch endonuclease vsr; PFAM: DNA mismatch endonuclease vsr YP_004011837.1 KEGG: sfu:Sfum_3853 hypothetical protein YP_004011838.1 KEGG: hau:Haur_0528 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_004011840.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cro:ROD_02631 prophage DNA adenine methylase YP_004011841.1 KEGG: ypb:YPTS_2315 XRE family transcriptional regulator YP_004011842.1 KEGG: pde:Pden_0265 XRE family transcriptional regulator YP_004011843.1 KEGG: mno:Mnod_3843 hypothetical protein YP_004011844.1 KEGG: bra:BRADO3171 hypothetical protein YP_004011845.1 KEGG: eel:EUBELI_01789 ATP-dependent endonuclease of the OLD family YP_004011846.1 KEGG: pin:Ping_2563 hypothetical protein YP_004011847.1 KEGG: dae:Dtox_1867 prophage antirepressor; PFAM: BRO domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004011848.1 KEGG: oca:OCAR_6818 acriflavin resistance protein YP_004011849.1 KEGG: rpe:RPE_1735 hypothetical protein YP_004011850.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; manually curated; PFAM: integrase YP_004011851.1 PFAM: OmpA/MotB domain protein; KEGG: rpe:RPE_0907 OmpA/MotB domain-containing protein YP_004011852.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004011853.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004011854.1 KEGG: gbe:GbCGDNIH1_1785 transposase YP_004011855.1 KEGG: ctt:CtCNB1_2822 MotA/TolQ/ExbB proton channel YP_004011856.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_4770 antenna complex alpha/subunit beta YP_004011857.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_2926 antenna complex alpha/subunit beta YP_004011858.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_4770 antenna complex alpha/subunit beta YP_004011859.1 PFAM: antenna complex alpha/subunit beta; KEGG: hha:Hhal_1408 antenna complex, alpha/subunit beta YP_004011860.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_4770 antenna complex alpha/subunit beta YP_004011861.1 KEGG: rpd:RPD_3789 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004011862.1 KEGG: msl:Msil_2020 multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein YP_004011863.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: rpe:RPE_3627 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver YP_004011864.1 PFAM: Circadian clock protein KaiC central region; KEGG: sjp:SJA_C2-00830 circadian clock protein KaiC; SMART: ATPase AAA YP_004011865.1 KEGG: pla:Plav_3249 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF1989 YP_004011866.1 PFAM: protein of unknown function YqcI/YcgG; KEGG: rru:Rru_A3044 hypothetical protein YP_004011867.1 PFAM: methyltransferase small; KEGG: mrd:Mrad2831_4912 methyltransferase small YP_004011868.1 KEGG: mex:Mext_2792 hypothetical protein YP_004011869.1 KEGG: pmy:Pmen_2880 phosphonate metabolism protein PhnM; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase YP_004011870.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter; KEGG: bra:BRADO5351 phosphonate ABC transporter ATP-binding component, PhnL protein; SMART: ATPase AAA YP_004011871.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; KEGG: azc:AZC_3397 phosphonate C-P lyase system protein PhnK; SMART: ATPase AAA YP_004011872.1 PFAM: phosphonate metabolism PhnJ; KEGG: rpe:RPE_3107 phosphonate metabolism PhnJ YP_004011873.1 PFAM: phosphonate metabolism; KEGG: rpd:RPD_3827 phosphonate metabolism YP_004011874.1 KEGG: mrd:Mrad2831_3856 phosphonate C-P lyase system protein PhnH; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_004011875.1 KEGG: bja:blr1221 phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_004011876.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: phosphonate metabolim protein, transferase hexapeptide repeat family YP_004011877.1 KEGG: dia:Dtpsy_2914 phosphonate ABC transporter inner membrane protein; TIGRFAM: phosphonate ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004011878.1 TIGRFAM: phosphonate ABC transporter periplasmic phosphonate binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein; KEGG: dba:Dbac_0828 phosphonate ABC transporter periplasmic phosphonate binding protein YP_004011879.1 TIGRFAM: phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter; KEGG: dba:Dbac_0829 phosphonate ABC transporter ATPase; SMART: ATPase AAA YP_004011880.1 PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: bid:Bind_0875 Na+ dependent nucleoside transporter YP_004011881.1 KEGG: cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004011882.1 PFAM: protein of unknown function DUF1636; KEGG: mrd:Mrad2831_3113 hypothetical protein YP_004011883.1 KEGG: rpc:RPC_1890 cobalamin (vitamin B12) biosynthesis CobW; TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein YP_004011884.1 TIGRFAM: cobaltochelatase, CobN subunit; KEGG: rpc:RPC_1889 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase YP_004011885.1 PFAM: transposase IS3/IS911 family protein; KEGG: rlg:Rleg_4905 transposase IS66 YP_004011886.1 TIGRFAM: TonB family protein; KEGG: met:M446_0507 TonB family protein YP_004011887.1 PFAM: protein of unknown function DUF1810; KEGG: protein of unknown function DUF1810 YP_004011888.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: vap:Vapar_3273 periplasmic glucan biosynthesis protein MdoG YP_004011889.1 PFAM: glutathione S-transferase domain; KEGG: oca:OCAR_7181 glutathione S-transferase YP_004011890.1 PFAM: regulatory protein TetR; KEGG: bpt:Bpet1592 TetR family transcriptional regulator YP_004011891.1 PFAM: glutathione S-transferase domain; KEGG: pol:Bpro_0387 glutathione S-transferase-like YP_004011892.1 SMART: ATPase AAA; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: sme:SMc04299 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004011893.1 KEGG: pla:Plav_0801 beta-lactamase domain-containing protein YP_004011894.1 PFAM: O-methyltransferase family 3; KEGG: rrs:RoseRS_2965 O-methyltransferase family protein YP_004011895.1 KEGG: rpe:RPE_4780 FoF1 ATP synthase, subunit I YP_004011896.1 KEGG: rhi:NGR_c04470 ATP synthase A chain; TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha YP_004011897.1 KEGG: pub:SAR11_0117 F0F1 ATP synthase subunit C; TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_004011898.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: avi:Avi_0931 ATP synthase YP_004011899.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: bov:BOV_0397 F0F1 ATP synthase subunit B YP_004011900.1 KEGG: mlo:msr2658 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004011901.1 KEGG: xau:Xaut_2055 GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_004011902.1 PFAM: aldehyde dehydrogenase; KEGG: mlo:mlr4051 aldehyde dehydrogenase YP_004011903.1 TIGRFAM: TonB family protein; KEGG: nha:Nham_3641 TonB-like YP_004011904.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: protein TolR YP_004011905.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: met:M446_0857 MotA/TolQ/ExbB proton channel YP_004011906.1 KEGG: mno:Mnod_3763 peptidase M10A and M12B matrixin and adamalysin; PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase YP_004011907.1 PFAM: stress-induced protein, KGG, repeat; KEGG: gox:GOX2079 hypothetical protein YP_004011909.1 KEGG: gbe:GbCGDNIH1_0092 hypothetical protein YP_004011910.1 KEGG: bbt:BBta_1239 hypothetical protein YP_004011911.1 KEGG: gox:GOX2517 hypothetical protein YP_004011912.1 KEGG: oca:OCAR_4866 enoyl-(acyl carrier protein) reductase YP_004011913.1 KEGG: Na+/H+ antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_004011914.1 KEGG: hne:HNE_3483 alkaline phosphatase; PFAM: alkaline phosphatase; SMART: alkaline phosphatase YP_004011915.1 KEGG: azl:AZL_e03730 major facilitator superfamily YP_004011916.1 KEGG: pmy:Pmen_2065 hypothetical protein YP_004011917.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: rce:RC1_0405 malic enzyme YP_004011918.1 KEGG: azc:AZC_0303 ferredoxin YP_004011919.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bbt:BBta_2167 hypothetical protein YP_004011920.1 KEGG: bid:Bind_1768 hypothetical protein YP_004011921.1 KEGG: bbt:BBta_5280 hypothetical protein; manually curated; PFAM: rhomboid family protein YP_004011922.1 KEGG: pap:PSPA7_5652 hypothetical protein; PFAM: transglutaminase; transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004011923.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: psl:Psta_2848 protein of unknown function DUF404 YP_004011924.1 PFAM: Uncharacterised protein family UPF0133; KEGG: azc:AZC_0144 hypothetical protein YP_004011925.1 TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: ATPase AAA; KEGG: mpo:Mpop_1812 DNA polymerase III subunits gamma and tau; SMART: ATPase AAA YP_004011926.1 PFAM: CHAD domain containing protein; KEGG: cwo:Cwoe_1697 CHAD domain containing protein YP_004011927.1 PFAM: metallophosphoesterase; KEGG: bid:Bind_0115 metallophosphoesterase YP_004011928.1 KEGG: oca:OCAR_7533 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004011929.1 KEGG: pla:Plav_0294 pyrimidine 5'-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase YP_004011930.1 TIGRFAM: seryl-tRNA synthetase; KEGG: msl:Msil_0586 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004011931.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: oan:Oant_3633 alcohol dehydrogenase YP_004011932.1 KEGG: glutamyl-tRNA(Gln) amidotransferase, B subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase subunit beta; PFAM: GatB region; Asn/Gln amidotransferase YP_004011933.1 PFAM: protein of unknown function DUF2141; KEGG: xcv:XCV0112 hypothetical protein YP_004011934.1 PFAM: chorismate mutase, type II; KEGG: azc:AZC_2845 chorismate mutase family protein YP_004011935.1 KEGG: rhi:NGR_c10960 glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, subunit alpha; PFAM: amidase YP_004011936.1 KEGG: mch:Mchl_3646 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase C subunit YP_004011937.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_004011938.1 PFAM: metallophosphoesterase; KEGG: pla:Plav_2112 metallophosphoesterase YP_004011939.1 KEGG: rpd:RPD_4180 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004011940.1 PFAM: DoxX family protein; KEGG: rhi:NGR_b21610 DoxX family protein YP_004011941.1 PFAM: protein of unknown function DUF710; KEGG: nha:Nham_3529 hypothetical protein YP_004011942.1 PFAM: major facilitator superfamily MFS_1; KEGG: pag:PLES_15011 integral membrane transporter YP_004011943.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: msl:Msil_0202 alcohol dehydrogenase zinc-binding domain protein YP_004011944.1 KEGG: rpe:RPE_2262 hypothetical protein YP_004011945.1 TIGRFAM: DNA-3-methyladenine glycosylase; KEGG: mlo:mll4583 3-methyl-adenine DNA glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_004011946.1 PFAM: MaoC domain protein dehydratase; KEGG: azo:azo3194 hypothetical protein YP_004011947.1 KEGG: rpd:RPD_4040 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; riboflavin kinase YP_004011948.1 KEGG: met:M446_0500 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; hypothetical protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004011949.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hch:HCH_06316 transcriptional regulator YP_004011950.1 KEGG: avi:Avi_4134 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004011951.1 TIGRFAM: gid protein; KEGG: pzu:PHZ_c1949 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A YP_004011952.1 KEGG: rpb:RPB_3945 hypothetical protein YP_004011953.1 KEGG: pla:Plav_0719 electron-transferring-flavoprotein dehydrogenase; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004011954.1 KEGG: nwi:Nwi_2596 phage SPO1 DNA polymerase-related protein; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily YP_004011955.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bja:bll7121 ionic transporter YP_004011956.1 KEGG: pla:Plav_3577 NnrU family protein YP_004011957.1 KEGG: rpe:RPE_0420 hypothetical protein YP_004011958.1 KEGG: rpc:RPC_0256 hypothetical protein YP_004011959.1 KEGG: rpe:RPE_0418 hypothetical protein YP_004011960.1 PFAM: hypothetical protein; KEGG: eum:ECUMN_2971 conserved hypothetical protein from bactreriophage origin; CBS domain YP_004011961.1 PFAM: methyltransferase type 12; KEGG: mgm:Mmc1_0033 biotin biosynthesis protein BioC YP_004011962.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; KEGG: rpc:RPC_0528 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: acetyl-CoA carboxylase, subunit alpha, conserved region YP_004011963.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: oan:Oant_0905 hypothetical protein YP_004011964.1 KEGG: nha:Nham_0755 hypothetical protein YP_004011965.1 KEGG: cyh:Cyan8802_3798 glutathione transferase; PFAM: glutathione S-transferase domain YP_004011966.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: msl:Msil_0090 pseudouridine synthase; SMART: RNA-binding S4 domain protein YP_004011967.1 KEGG: xau:Xaut_4762 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004011968.1 KEGG: xal:XALc_0346 esterase/lipase/thioesterase family protein YP_004011969.1 KEGG: rpa:RPA2117 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_004011970.1 PFAM: Domain of unknown function DUF2023; KEGG: rpb:RPB_3172 hypothetical protein YP_004011971.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet4519 LysR family transcriptional regulator YP_004011972.1 KEGG: bja:blr2695 hypothetical protein YP_004011973.1 KEGG: sit:TM1040_1689 hypothetical protein YP_004011974.1 KEGG: mes:Meso_0872 hypothetical protein YP_004011975.1 KEGG: pbe:PB000913.01.0 histamine-releasing factor YP_004011976.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mrd:Mrad2831_1943 sodium/hydrogen exchanger YP_004011977.1 KEGG: cre:CHLREDRAFT_194492 hypothetical protein YP_004011978.1 KEGG: bid:Bind_0085 ribosomal protein L36 YP_004011979.1 PFAM: Ham1 family protein; KEGG: hba:Hbal_3110 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_004011980.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; radical SAM protein; KEGG: rsp:RSP_1224 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004011981.1 PFAM: extracellular ligand-binding receptor; KEGG: pla:Plav_3584 extracellular ligand-binding receptor YP_004011982.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: hne:HNE_0763 tetrapyrrole methylase family protein YP_004011983.1 PFAM: Uncharacterised protein family UPF0102; KEGG: xau:Xaut_0339 hypothetical protein YP_004011984.1 TIGRFAM: glutathione synthetase; KEGG: mlo:mll4735 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_004011985.1 KEGG: cak:Caul_4140 hypothetical protein YP_004011986.1 KEGG: rle:RL4673 hypothetical protein YP_004011987.1 KEGG: det:DET0639 hypothetical protein YP_004011988.1 KEGG: nha:Nham_0206 transposase YP_004011989.1 KEGG: har:HEAR2212 hypothetical protein YP_004011990.1 KEGG: mgm:Mmc1_0788 hypothetical protein YP_004011991.1 manually curated; TIGRFAM: death-on-curing family protein; KEGG: ppd:Ppro_0009 death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic YP_004011992.1 KEGG: bid:Bind_3032 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004011993.1 KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin); PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein YP_004011994.1 KEGG: aeh:Mlg_1600 hypothetical protein YP_004011995.1 PFAM: GTP-binding protein HSR1-related; KEGG: tkm:TK90_0656 GTP-binding protein HSR1-related protein YP_004011996.1 PFAM: protein of unknown function DUF2312; KEGG: met:M446_5200 hypothetical protein YP_004011997.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psa:PST_2128 short chain dehydrogenase/reductase family oxidoreductase YP_004011998.1 PFAM: N-formylglutamate amidohydrolase; KEGG: N-formylglutamate amidohydrolase YP_004011999.1 KEGG: pla:Plav_3334 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012000.1 KEGG: mno:Mnod_2705 BFD domain protein (2Fe-2S)-binding domain protein; manually curated; PFAM: BFD domain protein [2Fe-2S]-binding domain protein YP_004012001.1 KEGG: bra:BRADO5731 bacterioferritin (iron storage homoprotein); TIGRFAM: bacterioferritin; PFAM: ferritin YP_004012002.1 KEGG: bac:BamMC406_5701 carbonate dehydratase; PFAM: carbonic anhydrase YP_004012003.1 PFAM: SCP-like extracellular; KEGG: SCP-like extracellular YP_004012004.1 PFAM: K potassium transporter; KEGG: bra:BRADO1466 KUP family potassium transporter low affinity YP_004012005.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: rpc:RPC_4092 zinc-binding alcohol dehydrogenase YP_004012006.1 KEGG: mno:Mnod_4372 hypothetical protein YP_004012007.1 PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_2463 AMP-dependent synthetase and ligase YP_004012008.1 KEGG: lif:LinJ01.0470 hypothetical protein YP_004012009.1 PFAM: Ppx/GppA phosphatase; KEGG: xau:Xaut_0836 Ppx/GppA phosphatase YP_004012010.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004012011.1 KEGG: lbc:LACBIDRAFT_294095 hypothetical protein YP_004012012.1 PFAM: rhomboid family protein; KEGG: bbt:BBta_7801 hypothetical protein YP_004012013.1 PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_6875 alpha/beta fold family hydrolase YP_004012014.1 PFAM: heat shock protein Hsp20; KEGG: bja:blr7961 HspC2 heat shock protein YP_004012015.1 KEGG: pla:Plav_1591 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase large subunit domain protein YP_004012016.1 KEGG: pla:Plav_1331 acetate--CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004012017.1 KEGG: mgr:MGG_09214 hypothetical protein YP_004012018.1 KEGG: msl:Msil_0137 alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase YP_004012019.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia YP_004012020.1 KEGG: rpt:Rpal_2206 hypothetical protein YP_004012021.1 KEGG: rpa:RPA1089 hypothetical protein YP_004012022.1 KEGG: pla:Plav_2536 hypothetical protein YP_004012023.1 KEGG: rlt:Rleg2_1975 apolipoprotein A1/A4/E YP_004012024.1 KEGG: rpt:Rpal_0318 hemolysin YP_004012025.1 PFAM: Uncharacterised protein family UPF0114; KEGG: hypothetical protein YP_004012026.1 KEGG: oca:OCAR_5296 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004012027.1 KEGG: pfo:Pfl01_4574 hypothetical protein YP_004012028.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO3372 ErfK/YbiS/YcfS/YnhG family protein; signal peptide YP_004012029.1 PFAM: glycosyl transferase family 8; KEGG: bln:Blon_2385 glycosyl transferase, family 8 YP_004012030.1 PFAM: HpcH/HpaI aldolase; KEGG: xau:Xaut_3870 HpcH/HpaI aldolase YP_004012031.1 KEGG: rpt:Rpal_2944 hemimethylated DNA binding protein; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_004012032.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mes:Meso_3708 glucose-methanol-choline oxidoreductase YP_004012033.1 KEGG: ajs:Ajs_3496 para-aminobenzoate synthase, subunit I; manually curated; PFAM: chorismate binding-like; aminotransferase class IV YP_004012034.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; GAF domain protein; response regulator receiver; KEGG: bra:BRADO6873 two-component sensor histidine kinase; SMART: GAF domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver YP_004012035.1 PFAM: sporulation domain-containing protein; KEGG: azc:AZC_2805 hypothetical protein YP_004012036.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: nha:Nham_1758 arginyl-tRNA synthetase YP_004012037.1 KEGG: smd:Smed_0413 hypothetical protein YP_004012038.1 KEGG: mno:Mnod_0392 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004012039.1 KEGG: tgr:Tgr7_0477 hypothetical protein YP_004012040.1 TIGRFAM: ferrochelatase; KEGG: azc:AZC_4272 ferrochelatase; PFAM: ferrochelatase YP_004012041.1 PFAM: Fmu (Sun) domain protein; KEGG: Fmu (Sun) domain protein YP_004012042.1 KEGG: mrd:Mrad2831_6010 hypothetical protein YP_004012043.1 KEGG: atc:AGR_C_480 GMP synthase (glutamine-hydrolysing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004012044.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sde:Sde_1211 2-dehydro-3-deoxyphosphooctonate aldolase YP_004012045.1 KEGG: avi:Avi_6000 two-component response regulator; PFAM: response regulator receiver; Sigma-70 region 4 type 2; SMART: response regulator receiver YP_004012046.1 KEGG: mfa:Mfla_1738 hypothetical protein YP_004012047.1 PFAM: class I peptide chain release factor; KEGG: azl:AZL_018590 hypothetical protein YP_004012048.1 KEGG: rpe:RPE_0770 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_004012049.1 KEGG: pla:Plav_2408 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004012050.1 KEGG: azc:AZC_4549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; peptidoglycan-binding protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_004012051.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aba:acid345_2320 hypothetical protein YP_004012052.1 PFAM: CreA family protein; KEGG: rru:Rru_A2083 CreA YP_004012053.1 PFAM: MgtC/SapB transporter; KEGG: rpc:RPC_2114 MgtC/SapB transporter YP_004012054.1 PFAM: GcrA cell cycle regulator; KEGG: ret:RHE_CH00515 hypothetical protein YP_004012055.1 KEGG: pzu:PHZ_c2222 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004012056.1 KEGG: dac:Daci_2539 peptidase S24/S26 domain-containing protein YP_004012057.1 PFAM: CoA-binding protein; KEGG: mlo:mlr8464 hypothetical protein YP_004012058.1 PFAM: protein of unknown function DUF185; KEGG: azc:AZC_3983 hypothetical protein YP_004012059.1 PFAM: protein of unknown function DUF152; KEGG: pla:Plav_2260 hypothetical protein YP_004012060.1 KEGG: rru:Rru_A0644 hypothetical protein YP_004012061.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: azc:AZC_3998 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004012062.1 KEGG: mlo:mlr2692 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25-like YP_004012063.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: sil:SPO0811 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004012064.1 KEGG: pla:Plav_2255 GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004012065.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004012066.1 KEGG: oca:OCAR_5098 hypothetical protein YP_004012067.1 KEGG: TCCD-inducible-PARP-like domain-containing protein YP_004012068.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: met:M446_4541 mandelate racemase/muconate lactonizing protein YP_004012069.1 PFAM: protein of unknown function DUF1611; KEGG: mno:Mnod_4476 protein of unknown function DUF1611 YP_004012070.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: rpt:Rpal_2027 TonB-dependent receptor YP_004012071.1 KEGG: rpb:RPB_3553 hypothetical protein YP_004012072.1 PFAM: CoA-binding protein; ATP-grasp domain protein; GCN5-related N-acetyltransferase; KEGG: rce:RC1_2764 acetyltransferase YP_004012073.1 KEGG: xfn:XfasM23_1987 membrane protein YP_004012074.1 PFAM: protein of unknown function DUF179; KEGG: nha:Nham_3550 hypothetical protein YP_004012075.1 KEGG: aminoglycoside phosphotransferase YP_004012076.1 KEGG: rpt:Rpal_3853 porin YP_004012077.1 TIGRFAM: glutamate/cysteine ligase; KEGG: azc:AZC_2967 glutamate-cysteine ligase; PFAM: glutamate--cysteine ligase YP_004012078.1 PFAM: protein of unknown function DUF558; KEGG: mes:Meso_0372 16S ribosomal RNA methyltransferase RsmE YP_004012079.1 KEGG: pla:Plav_0653 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_004012080.1 PFAM: inositol monophosphatase; KEGG: inositol monophosphatase YP_004012081.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; protein of unknown function DUF374; KEGG: bra:BRADO6096 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) YP_004012082.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: bra:BRADO6095 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_004012083.1 PFAM: protein of unknown function DUF344; KEGG: azl:AZL_c02830 hypothetical protein YP_004012084.1 PFAM: ferric reductase domain protein transmembrane component domain; KEGG: bmr:BMI_II984 hypothetical protein YP_004012085.1 KEGG: aha:AHA_3336 serine hydroxymethyltransferase YP_004012086.1 PFAM: invasion associated locus B family protein; KEGG: oca:OCAR_4683 invasion associated locus B YP_004012087.1 TIGRFAM: threonine synthase; KEGG: mno:Mnod_0268 threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_004012088.1 PFAM: peptidase M16 domain protein; KEGG: pla:Plav_0678 peptidase M16 domain-containing protein YP_004012089.1 KEGG: pla:Plav_0679 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004012090.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; KEGG: diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic/7TM domain sensor(s); SMART: EAL domain protein; GGDEF domain containing protein YP_004012091.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sme:SMc01281 sulfite oxidase subunit YedY YP_004012092.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: cag:Cagg_0667 RarD protein, DMT superfamily transporter YP_004012093.1 PFAM: protein of unknown function DUF81; KEGG: azc:AZC_1630 permease YP_004012094.1 KEGG: bja:blr3734 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase YP_004012095.1 PFAM: integrase family protein; KEGG: bbt:BBta_3455 integrase/recombinase YP_004012096.1 KEGG: apt:APA01_22850 hypothetical protein YP_004012097.1 KEGG: integral membrane sensor signal transduction histidine kinase YP_004012098.1 KEGG: drm:Dred_0478 anhydrase family 3 protein YP_004012099.1 KEGG: ret:RHE_CH00296 hypothetical protein YP_004012100.1 manually curated; KEGG: rpe:RPE_2346 hypothetical protein YP_004012101.1 PFAM: protein of unknown function DUF81; KEGG: tgr:Tgr7_2424 protein of unknown function DUF81 YP_004012102.1 PFAM: protein of unknown function DUF81; KEGG: tgr:Tgr7_2424 protein of unknown function DUF81 YP_004012103.1 PFAM: conjugation TrbI family protein; KEGG: net:Neut_2539 conjugation TrbI family protein YP_004012104.1 KEGG: eba:p2B6 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004012105.1 KEGG: hna:Hneap_1665 conjugal transfer protein YP_004012106.1 KEGG: kpe:KPK_1289 P-type conjugative transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004012107.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: kpe:KPK_1290 P-type conjugative transfer protein TrbJ YP_004012108.1 KEGG: net:Neut_2552 CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: ATPase AAA YP_004012109.1 KEGG: net:Neut_2553 conjugal transfer protein TrbD YP_004012110.1 PFAM: Conjugal transfer protein TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC YP_004012111.1 KEGG: net:Neut_2555 type II secretion system protein E; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_004012112.1 KEGG: xfa:XFa0001 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004012113.1 KEGG: bja:bll2159 transposase YP_004012114.1 KEGG: rsq:Rsph17025_3725 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_004012115.1 PFAM: transposase IS3/IS911 family protein; KEGG: azl:AZL_f01430 transposase YP_004012116.1 KEGG: hypothetical protein YP_004012117.1 KEGG: dps:DP1182 choloylglycine hydrolase YP_004012118.1 manually curated; KEGG: cdl:CDR20291_1777 hypothetical protein YP_004012119.1 KEGG: ecx:EcHS_A2648 hypothetical protein YP_004012120.1 KEGG: ava:Ava_3199 hypothetical protein YP_004012121.1 KEGG: net:Neut_2577 transfer origin protein, TraL YP_004012122.1 KEGG: net:Neut_2576 hypothetical protein YP_004012123.1 PFAM: integrase family protein; KEGG: rpt:Rpal_3817 integrase family protein YP_004012124.1 KEGG: scl:sce0728 hypothetical protein YP_004012125.1 PFAM: transposase IS3/IS911 family protein; KEGG: xau:Xaut_4820 transposase IS3/IS911 family protein YP_004012126.1 KEGG: ath:AT1G13640 phosphatidylinositol 3- and 4-kinase family protein YP_004012127.1 KEGG: rpe:RPE_2641 ATPase; PFAM: ATPase AAA-2 domain protein; SMART: ATPase AAA YP_004012128.1 KEGG: rer:RER_25620 ABC transporter substrate-binding protein YP_004012129.1 KEGG: dmo:Dmoj_GI21300 GI21300 gene product from transcript GI21300-RA YP_004012130.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: azc:AZC_4133 peptidase S41A protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004012131.1 KEGG: bja:bll2159 transposase YP_004012132.1 KEGG: rsq:Rsph17025_3725 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_004012133.1 PFAM: transposase IS3/IS911 family protein; KEGG: azl:AZL_f01430 transposase YP_004012134.1 KEGG: azc:AZC_3102 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004012135.1 KEGG: cwo:Cwoe_3829 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004012136.1 KEGG: cdl:CDR20291_2241 glycine reductase complex component B alpha and subunit betas YP_004012137.1 KEGG: xau:Xaut_0285 aminoglycoside phosphotransferase YP_004012138.1 KEGG: bvi:Bcep1808_2468 hypothetical protein YP_004012139.1 manually curated; KEGG: smd:Smed_5453 hypothetical protein YP_004012140.1 PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein YP_004012142.1 KEGG: rpb:RPB_2145 outer membrane protein YP_004012143.1 PFAM: Spermine synthase; KEGG: xau:Xaut_2119 spermine synthase YP_004012144.1 KEGG: xau:Xaut_2120 signal peptide YP_004012145.1 KEGG: bbt:BBta_1292 hypothetical protein YP_004012146.1 KEGG: xau:Xaut_2122 hypothetical protein YP_004012147.1 KEGG: xau:Xaut_2123 HupE/UreJ protein YP_004012148.1 KEGG: xau:Xaut_2124 hypothetical protein YP_004012149.1 PFAM: peptidase A24A prepilin type IV; KEGG: xau:Xaut_2105 peptidase A24A prepilin type IV YP_004012150.1 KEGG: xau:Xaut_2109 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_004012151.1 PFAM: type II secretion system F domain; KEGG: ppd:Ppro_2512 type II secretion system protein YP_004012152.1 PFAM: type II secretion system protein E; general secretory system II protein E domain protein; KEGG: gspE; general secretion pathway protein E YP_004012153.1 KEGG: cre:CHLREDRAFT_205871 transcription factor-like protein YP_004012154.1 PFAM: fimbrial assembly family protein; KEGG: gsu:GSU1781 hypothetical protein YP_004012155.1 KEGG: rxy:Rxyl_1463 Tfp pilus assembly protein PilO-like protein YP_004012156.1 KEGG: pca:Pcar_0595 hypothetical protein YP_004012157.1 PFAM: type II secretion system protein G; KEGG: gspG2; general secretion pathway protein G YP_004012158.1 KEGG: gsu:GSU1777 hypothetical protein YP_004012159.1 PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: gur:Gura_1929 type II and III secretion system protein YP_004012160.1 KEGG: afv:AFLA_057220 translation elongation factor G2 YP_004012161.1 KEGG: rpc:RPC_2219 hypothetical protein YP_004012162.1 KEGG: xau:Xaut_4179 hypothetical protein YP_004012163.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; pyrrolo-quinoline quinone repeat-containing protein; KEGG: azo:azo2972 ExaA2 protein; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_004012164.1 PFAM: pentapeptide repeat protein; KEGG: azo:azo2973 pentapeptide repeat-containing protein YP_004012165.1 KEGG: azo:azo2974 cytochrome C550 YP_004012166.1 PFAM: cytochrome C class I; KEGG: azl:AZL_a09940 cytochrome C550 YP_004012167.1 PFAM: cytochrome C class I; Cache type 2 domain protein; KEGG: azo:azo2969 hypothetical protein YP_004012168.1 PFAM: aldehyde dehydrogenase; KEGG: rru:Rru_A0931 aldehyde dehydrogenase YP_004012169.1 PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase YP_004012170.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: nwi:Nwi_2890 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004012171.1 KEGG: rpt:Rpal_2648 methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_004012172.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: rpt:Rpal_2647 methylcitrate synthase; PFAM: citrate synthase YP_004012173.1 KEGG: oca:OCAR_7076 2-methylcitrate dehydratase 2; PFAM: MmgE/PrpD family protein YP_004012174.1 PFAM: thioesterase; KEGG: rpt:Rpal_2645 thioesterase YP_004012175.1 KEGG: rce:RC1_0319 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein YP_004012176.1 KEGG: rpt:Rpal_2641 hypothetical protein YP_004012177.1 KEGG: rce:RC1_0317 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM protein YP_004012178.1 KEGG: hna:Hneap_1175 protein of unknown function DUF463 YcjX family protein YP_004012179.1 KEGG: swi:Swit_4792 XRE family transcriptional regulator; PFAM: protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004012180.1 KEGG: rru:Rru_A0458 hypothetical protein YP_004012181.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: rpb:RPB_0607 superoxide dismutase YP_004012182.1 PFAM: CoA-binding protein; GCN5-related N-acetyltransferase; KEGG: mag:amb1238 hypothetical protein YP_004012183.1 KEGG: rpe:RPE_0596 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012184.1 KEGG: rpt:Rpal_0733 ABC transporter; PFAM: ABC transporter related; inner-membrane translocator; SMART: ATPase AAA YP_004012185.1 PFAM: inner-membrane translocator; KEGG: rpe:RPE_0594 inner-membrane translocator YP_004012186.1 PFAM: extracellular ligand-binding receptor; KEGG: rpe:RPE_0593 extracellular ligand-binding receptor YP_004012187.1 KEGG: cak:Caul_1386 hypothetical protein YP_004012188.1 KEGG: rce:RC1_0843 metallo-beta-lactamase superfamily YP_004012189.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: pla:Plav_0821 acyl-CoA dehydrogenase domain-containing protein YP_004012190.1 TIGRFAM: lytic murein transglycosylase; KEGG: rpe:RPE_1042 lytic murein transglycosylase YP_004012192.1 KEGG: rru:Rru_A0787 cystathionine beta-synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; hypothetical protein; SMART: hypothetical protein YP_004012193.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rru:Rru_A0786 cystathionine gamma-lyase YP_004012194.1 PFAM: protein of unknown function DUF526; KEGG: azc:AZC_3981 hypothetical protein YP_004012195.1 PFAM: protein of unknown function DUF1790; KEGG: met:M446_0854 hypothetical protein YP_004012196.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: rlg:Rleg_3018 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004012197.1 KEGG: azc:AZC_1326 Na+/H+ antiporter protein YP_004012198.1 PFAM: protein of unknown function DUF461; KEGG: azl:AZL_a05790 hypothetical protein YP_004012199.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: mno:Mnod_7449 manganese and iron superoxide dismutase YP_004012200.1 PFAM: AsmA family protein; KEGG: azc:AZC_4482 hypothetical protein YP_004012201.1 KEGG: pol:Bpro_4929 hemolysin-type calcium-binding region YP_004012203.1 KEGG: bja:bll7385 partition protein YP_004012204.1 KEGG: ecq:ECED1_2644 conserved hypothetical protein; repressor YP_004012206.1 KEGG: azc:AZC_4041 potassium uptake protein YP_004012207.1 KEGG: helix-turn-helix protein, CopG YP_004012209.1 KEGG: cin:100177130 similar to nmd3 homolog (s. cerevisiae) YP_004012210.1 KEGG: csc:Csac_0067 zeta toxin family protein YP_004012211.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: azl:AZL_010420 CRISPR-associated protein YP_004012212.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: azl:AZL_027450 CRISPR-associated protein YP_004012213.1 KEGG: rmr:Rmar_2913 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_004012214.1 PFAM: protein of unknown function DUF324; KEGG: syn:sll7063 hypothetical protein YP_004012215.1 KEGG: syn:sll7064 hypothetical protein YP_004012216.1 PFAM: protein of unknown function DUF324; KEGG: syn:sll7065 hypothetical protein YP_004012217.1 PFAM: protein of unknown function DUF324; KEGG: syn:sll7066 hypothetical protein YP_004012218.1 KEGG: syn:sll7067 hypothetical protein YP_004012219.1 KEGG: scl:sce0782 outer membrane receptor for transport of vitamin B12 YP_004012220.1 KEGG: alv:Alvin_3127 CRISPR-associated protein, APE2256 family; TIGRFAM: CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256 YP_004012221.1 KEGG: net:Neut_2225 CRISPR-associated NE0113 family protein; TIGRFAM: CRISPR-associated protein, NE0113 family; PFAM: CRISPR-assoc protein, NE0113/Csx13 YP_004012222.1 KEGG: jde:Jden_0396 glycoside hydrolase family 81 YP_004012223.1 KEGG: hha:Hhal_0624 CRISPR-associated protein VVA1548 family; TIGRFAM: CRISPR-associated protein, VVA1548 family; PFAM: CRISPR-associated protein VVA1548 family YP_004012224.1 PFAM: protein of unknown function DUF497; KEGG: rsp:RSP_2763 hypothetical protein YP_004012225.1 KEGG: rlg:Rleg_6976 hypothetical protein YP_004012226.1 KEGG: tet:TTHERM_00455370 protein kinase domain containing protein YP_004012227.1 KEGG: hne:HNE_2971 hypothetical protein YP_004012228.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: net:Neut_2579 relaxase/mobilization nuclease family protein YP_004012229.1 KEGG: bfa:Bfae_25920 hypothetical protein YP_004012230.1 PFAM: protein of unknown function DUF262; KEGG: hypothetical protein YP_004012231.1 KEGG: avi:Avi_3946 exonuclease protein YP_004012232.1 KEGG: avi:Avi_3945 ATP-dependent dsDNA exonuclease protein; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_004012233.1 KEGG: mpo:Mpop_3103 hypothetical protein YP_004012234.1 KEGG: ecz:ECS88_1341 conserved hypothetical protein from phage origin YP_004012235.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004012236.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004012237.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004012238.1 KEGG: nml:Namu_4241 AMP-dependent synthetase and ligase YP_004012239.1 KEGG: hor:Hore_17110 hypothetical protein YP_004012240.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: sme:SMc02292 type I restriction enzyme R protein; SMART: DEAD-like helicase YP_004012241.1 PFAM: restriction modification system DNA specificity domain; KEGG: cli:Clim_2467 restriction modification system DNA specificity domain YP_004012242.1 PFAM: N-6 DNA methylase; KEGG: sme:SMc02296 modification enzyme transmembrane protein YP_004012243.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004012245.1 PFAM: integrase family protein; KEGG: nwi:Nwi_0275 phage integrase YP_004012246.1 KEGG: mch:Mchl_2719 hypothetical protein YP_004012247.1 KEGG: pseudouridine synthase; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase YP_004012248.1 KEGG: xau:Xaut_1986 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004012249.1 TIGRFAM: malate synthase A; KEGG: pzu:PHZ_c3212 malate synthase; PFAM: malate synthase family protein YP_004012250.1 PFAM: protein of unknown function DUF1153; KEGG: azc:AZC_1033 hypothetical protein YP_004012251.1 KEGG: mlo:mll1268 hypothetical protein YP_004012252.1 KEGG: tgo:TGME49_006430 formin homology 2 domain-containing protein YP_004012253.1 PFAM: polysaccharide deacetylase; KEGG: xau:Xaut_1324 polysaccharide deacetylase YP_004012254.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slt:Slit_0716 GCN5-related N-acetyltransferase YP_004012255.1 KEGG: rru:Rru_A2172 hypothetical protein YP_004012256.1 KEGG: pla:Plav_0752 quinone oxidoreductase YhdH/YhfP; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_004012257.1 PFAM: glycoside hydrolase; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase YP_004012258.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mlo:mll1088 hypothetical protein YP_004012259.1 KEGG: mmu:226409 zinc finger, RAN-binding domain containing 3 YP_004012260.1 KEGG: bph:Bphy_4554 phytanoyl-CoA dioxygenase YP_004012261.1 KEGG: met:M446_2699 hypothetical protein YP_004012262.1 KEGG: bcj:BCAM0773 hypothetical protein YP_004012263.1 PFAM: methyltransferase type 11; KEGG: chl:Chy400_2646 methyltransferase type 11 YP_004012264.1 KEGG: oca:OCAR_4052 RND superfamily transporter YP_004012265.1 KEGG: bja:blr4677 hypothetical protein YP_004012266.1 KEGG: mno:Mnod_0353 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004012267.1 KEGG: nwi:Nwi_1701 hypothetical protein YP_004012268.1 KEGG: mno:Mnod_7227 hypothetical protein YP_004012269.1 PFAM: Clp domain protein; KEGG: gga:396544 nascent polypeptide-associated complex subunit alpha YP_004012270.1 KEGG: bqu:BQ07600 hypothetical protein YP_004012271.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004012272.1 KEGG: ang:An08g08620 hypothetical protein YP_004012273.1 manually curated; KEGG: oca:OCAR_4675 hypothetical protein YP_004012274.1 KEGG: pla:Plav_0439 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004012275.1 KEGG: cre:CHLREDRAFT_10029 fibrocystin-L-like protein YP_004012276.1 KEGG: pzu:PHZ_p0115 heat shock protein DnaJ, N-terminal; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004012277.1 KEGG: pzu:PHZ_p0045 hypothetical protein YP_004012278.1 KEGG: bbt:BBta_3386 selenide, water dikinase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004012279.1 PFAM: radical SAM protein; KEGG: eli:ELI_00345 radical SAM domain-containing protein YP_004012280.1 PFAM: SNARE associated Golgi protein; KEGG: pla:Plav_0303 SNARE associated Golgi protein YP_004012281.1 KEGG: bbt:BBta_0260 GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A); TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004012282.1 KEGG: sal:Sala_1860 aminoglycoside phosphotransferase YP_004012283.1 KEGG: rpe:RPE_4369 nitrogenase-associated protein; TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related YP_004012284.1 KEGG: xau:Xaut_0125 hypothetical protein YP_004012285.1 KEGG: lch:Lcho_1428 hypothetical protein YP_004012286.1 PFAM: globin; KEGG: bbt:BBta_5890 hemoglobin protein (truncated hemoglobin) YP_004012287.1 SMART: response regulator receiver; KEGG: msl:Msil_3633 response regulator receiver protein YP_004012288.1 TIGRFAM: nitrogenase iron protein; KEGG: mca:MCA0229 nitrogenase reductase; PFAM: NifH/frxC-family protein YP_004012289.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: msl:Msil_3631 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004012290.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: msl:Msil_3630 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004012291.1 KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; BFD domain protein [2Fe-2S]-binding domain protein YP_004012292.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_004012293.1 KEGG: rpb:RPB_0974 dinitrogenase iron-molybdenum cofactor biosynthesis; TIGRFAM: nitrogen fixation protein NifX; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004012294.1 KEGG: afr:AFE_1514 hypothetical protein; TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269 YP_004012295.1 PFAM: protein of unknown function DUF683; KEGG: xau:Xaut_0095 hypothetical protein YP_004012296.1 TIGRFAM: ferredoxin III, nif-specific; KEGG: bbt:BBta_5917 ferredoxin-3 (ferredoxin III) (FdIII) YP_004012297.1 PFAM: NifQ family protein; KEGG: gdj:Gdia_1561 NifQ family protein YP_004012298.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: npu:Npun_F2517 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_004012299.1 PFAM: rhomboid family protein; KEGG: sti:Sthe_1778 rhomboid family protein YP_004012300.1 KEGG: pde:Pden_1906 hypothetical protein YP_004012301.1 KEGG: azc:AZC_2566 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_004012302.1 PFAM: AIG2 family protein; KEGG: bra:BRADO1352 hypothetical protein YP_004012303.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rme:Rmet_2119 zinc-binding alcohol dehydrogenase YP_004012304.1 KEGG: rpc:RPC_0252 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; ribulose bisphosphate carboxylase, large subunit-like YP_004012305.1 PFAM: protein of unknown function UPF0047; KEGG: rpe:RPE_0423 hypothetical protein YP_004012306.1 PFAM: SOUL heme-binding protein; KEGG: rpe:RPE_3013 SOUL heme-binding protein YP_004012307.1 KEGG: oan:Oant_0547 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain-containing protein YP_004012308.1 KEGG: oan:Oant_0542 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII small subunit; PFAM: exonuclease VII small subunit YP_004012309.1 PFAM: histone deacetylase superfamily; KEGG: histone deacetylase YP_004012310.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR YP_004012311.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: bmr:BMI_I415 enoyl-CoA hydratase YP_004012312.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: mno:Mnod_2841 acyl-CoA dehydrogenase domain protein YP_004012313.1 KEGG: pla:Plav_0774 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein YP_004012314.1 KEGG: pla:Plav_0582 S-adenosylmethionine decarboxylase related; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related YP_004012315.1 PFAM: MaoC domain protein dehydratase; KEGG: azo:azo0191 hypothetical protein YP_004012316.1 KEGG: pla:Plav_0583 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_004012317.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004012318.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: rpe:RPE_4612 phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; phosphoribosylglycinamide synthetase, N-domain; phosphoribosylglycinamide synthetase, C-domain YP_004012319.1 PFAM: PRC-barrel domain protein; KEGG: ret:RHE_CH00851 hypothetical protein YP_004012320.1 PFAM: protein of unknown function DUF892; KEGG: rpb:RPB_1737 hypothetical protein YP_004012321.1 PFAM: thioesterase; KEGG: pla:Plav_2118 Pol-Pal system-associated acyl-CoA thioesterase YP_004012322.1 KEGG: mag:amb4400 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein YP_004012323.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: mag:amb0607 monomeric isocitrate dehydrogenase; PFAM: isocitrate dehydrogenase NADP-dependent monomeric type YP_004012325.1 KEGG: azc:AZC_3409 iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004012326.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: xau:Xaut_0107 NifU domain-containing protein YP_004012327.1 TIGRFAM: cysteine desulfurase NifS; KEGG: gdj:Gdia_1558 cysteine desulfurase NifS; PFAM: aminotransferase class V YP_004012328.1 PFAM: ferric-uptake regulator; KEGG: azc:AZC_0367 Fe2+/Zn2+ uptake regulation protein YP_004012329.1 KEGG: msl:Msil_1694 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004012330.1 KEGG: pla:Plav_3195 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004012331.1 KEGG: pla:Plav_3194 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004012332.1 KEGG: rce:RC1_1205 ribosome recycling factor frr; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004012333.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase; manually curated; KEGG: atc:AGR_C_2550 probable di-trans,poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase YP_004012334.1 PFAM: phosphatidate cytidylyltransferase; KEGG: rlg:Rleg_1781 phosphatidate cytidylyltransferase YP_004012335.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: rru:Rru_A1592 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004012336.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: bbt:BBta_4510 zinc metalloprotease; SMART: PDZ/DHR/GLGF domain protein YP_004012337.1 KEGG: azc:AZC_1701 outer membrane protein precursor; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004012338.1 KEGG: mno:Mnod_1530 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_004012339.1 KEGG: rhi:NGR_c13430 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004012340.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mag:amb2486 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_004012341.1 PFAM: protein of unknown function DUF1009; KEGG: protein of unknown function DUF1009 YP_004012342.1 PFAM: protein of unknown function DUF423; KEGG: azl:AZL_c00930 hypothetical protein YP_004012343.1 KEGG: cre:CHLREDRAFT_6783 SNF2 superfamily protein YP_004012344.1 KEGG: scl:sce6240 hypothetical protein YP_004012345.1 TIGRFAM: heat shock protein HslVU, ATPase HslU; PFAM: ATPase AAA; KEGG: pla:Plav_1240 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase AAA YP_004012346.1 PFAM: 20S proteasome A and subunit betas; KEGG: pla:Plav_1239 ATP-dependent protease peptidase subunit YP_004012347.1 KEGG: rpe:RPE_0370 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004012348.1 KEGG: bja:blr0651 hypothetical protein YP_004012349.1 KEGG: msl:Msil_2552 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004012350.1 KEGG: npu:Npun_R6586 FG-GAP repeat-containing protein YP_004012351.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bid:Bind_0246 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_004012352.1 KEGG: bid:Bind_3592 hypothetical protein YP_004012353.1 KEGG: helicase; PFAM: helicase domain protein; SMART: helicase YP_004012354.1 KEGG: pla:Plav_1697 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004012355.1 KEGG: ppl:POSPLDRAFT_100107 hypothetical protein YP_004012356.1 KEGG: rpe:RPE_3556 recombination factor protein RarA; PFAM: ATPase AAA; SMART: ATPase AAA YP_004012357.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: bid:Bind_1643 methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B YP_004012358.1 KEGG: xau:Xaut_1445 citrate transporter YP_004012359.1 KEGG: xtr:549608 WAS protein family homolog 1 YP_004012360.1 KEGG: acr:Acry_3424 cytochrome b561 YP_004012361.1 KEGG: rpc:RPC_2958 twin-arginine translocation pathway signal YP_004012362.1 KEGG: msl:Msil_3767 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase; hemerythrin HHE cation binding domain protein YP_004012363.1 KEGG: rpc:RPC_1870 secretion protein HlyD; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004012364.1 KEGG: rpc:RPC_1871 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004012365.1 KEGG: rpt:Rpal_2616 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_004012366.1 TIGRFAM: excisionase; KEGG: stp:Strop_0059 DNA binding domain-containing protein YP_004012367.1 PFAM: integrase family protein; KEGG: met:M446_6722 integrase family protein YP_004012368.1 KEGG: met:M446_6723 prophage CP4-57 regulatory; manually curated; PFAM: regulatory protein MerR YP_004012369.1 KEGG: mno:Mnod_5075 hypothetical protein YP_004012370.1 KEGG: hau:Haur_3836 phenylalanyl-tRNA synthetase subunit alpha YP_004012371.1 KEGG: dsh:Dshi_2940 hypothetical protein YP_004012372.1 KEGG: tkm:TK90_1236 hypothetical protein YP_004012373.1 KEGG: tcr:507957.200 mucin-associated surface protein (MASP) YP_004012374.1 KEGG: ppp:PHYPADRAFT_27594 hypothetical protein YP_004012375.1 PFAM: peptidase S49; KEGG: bgr:Bgr_03550 phage protein GP18 YP_004012376.1 KEGG: btr:Btr_0523 phage protein YP_004012377.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004012378.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004012379.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004012380.1 KEGG: mag:amb2714 hypothetical protein YP_004012381.1 KEGG: rpe:RPE_1031 hypothetical protein YP_004012382.1 KEGG: eum:ECUMN_2306 hypothetical protein YP_004012383.1 KEGG: ecg:E2348C_1635 hypothetical protein YP_004012385.1 KEGG: rpd:RPD_1418 hypothetical protein YP_004012386.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: xau:Xaut_4197 membrane-bound proton-translocating pyrophosphatase; PFAM: inorganic H pyrophosphatase YP_004012387.1 KEGG: bbt:BBta_3643 cation efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_004012388.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: bbt:BBta_p0060 secretion protein HlyD precursor YP_004012389.1 KEGG: rec:RHECIAT_CH0002221 hypothetical protein YP_004012391.1 PFAM: Curli production assembly/transport component CsgF; KEGG: rpd:RPD_2731 hypothetical protein YP_004012392.1 PFAM: Curli production assembly/transport component CsgG; KEGG: fba:FIC_01311 curli production assembly/transport component CsgG YP_004012393.1 KEGG: svo:SVI_2693 hypothetical protein YP_004012394.1 PFAM: Curlin associated repeat-containing protein; KEGG: ppw:PputW619_2954 curlin-associated protein YP_004012395.1 KEGG: ctu:Ctu_16200 minor curlin subunit YP_004012396.1 KEGG: tcu:Tcur_1870 hypothetical protein YP_004012397.1 KEGG: fjo:Fjoh_2348 hypothetical protein YP_004012398.1 KEGG: bid:Bind_2971 transposase YP_004012399.1 KEGG: azc:AZC_3162 ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012400.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: xau:Xaut_1210 binding-protein-dependent transport systems inner membrane component YP_004012401.1 KEGG: xau:Xaut_1211 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_004012402.1 KEGG: bxe:Bxe_B1552 cysteine desulphurases, SufS; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004012403.1 KEGG: bid:Bind_1233 hypothetical protein YP_004012404.1 KEGG: geo:Geob_1662 radical SAM protein; PFAM: radical SAM protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004012405.1 KEGG: geo:Geob_1658 hypothetical protein YP_004012406.1 KEGG: geo:Geob_1657 hypothetical protein YP_004012407.1 KEGG: mag:amb1857 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004012408.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7711 amino acid permease-associated region YP_004012409.1 PFAM: aminotransferase class-III; KEGG: cag:Cagg_2915 aminotransferase class-III YP_004012410.1 KEGG: cpi:Cpin_3954 hypothetical protein YP_004012411.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004012412.1 KEGG: msl:Msil_2481 hypothetical protein YP_004012413.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msl:Msil_2480 short-chain dehydrogenase/reductase SDR YP_004012414.1 PFAM: protein of unknown function DUF938; KEGG: bid:Bind_1301 hypothetical protein YP_004012415.1 KEGG: msl:Msil_2478 hypothetical protein; PFAM: alpha/beta hydrolase fold YP_004012416.1 KEGG: fsu:Fisuc_0157 cupin 2 conserved barrel domain protein YP_004012417.1 KEGG: rpt:Rpal_2588 hypothetical protein YP_004012418.1 KEGG: ach:Achl_1622 CoA-binding protein YP_004012419.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: Holliday junction DNA helicase RuvB; SMART: ATPase AAA YP_004012420.1 KEGG: amc:MADE_00669 RNA procession exonuclease-like protein YP_004012421.1 KEGG: gur:Gura_3639 molybdopterin oxidoreductase YP_004012422.1 KEGG: amc:MADE_00670 ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_004012423.1 KEGG: oca:OCAR_7278 hypothetical protein YP_004012424.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_2785 major facilitator superfamily permease YP_004012425.1 PFAM: PRC-barrel domain protein; KEGG: azc:AZC_2760 hypothetical protein YP_004012426.1 KEGG: mrd:Mrad2831_5652 hypothetical protein YP_004012427.1 KEGG: ath:AT5G35660 hypothetical protein YP_004012428.1 KEGG: cyb:CYB_0748 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004012429.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein; KEGG: xau:Xaut_1762 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase ; BRCT domain protein YP_004012430.1 KEGG: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004012431.1 PFAM: protein of unknown function DUF204; KEGG: bbt:BBta_7389 hypothetical protein YP_004012432.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: oca:OCAR_5252 ComL, competence lipoprotein YP_004012433.1 KEGG: rhi:NGR_c21000 UDP-3-0-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004012434.1 KEGG: azc:AZC_4564 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004012435.1 KEGG: rhi:NGR_c21020 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_004012436.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: sme:SMc01872 cell division transmembrane protein YP_004012437.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: mno:Mnod_7439 D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_004012438.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_004012439.1 KEGG: mrd:Mrad2831_2355 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004012440.1 TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: azc:AZC_4555 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28 YP_004012441.1 PFAM: cell cycle protein; KEGG: bov:BOV_1389 cell division protein FtsW YP_004012442.1 KEGG: azc:AZC_0101 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004012443.1 KEGG: rpd:RPD_3397 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase, family 4, conserved region; phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004012444.1 KEGG: pla:Plav_2417 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004012445.1 KEGG: oca:OCAR_5237 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004012446.1 KEGG: pla:Plav_2415 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_004012447.1 KEGG: pla:Plav_2414 hypothetical protein YP_004012448.1 PFAM: cobalamin B12-binding domain protein; KEGG: mdi:METDI0930 coenzyme B12-binding YP_004012449.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rpc:RPC_1245 coenzyme F420 hydrogenase/dehydrogenase subunit beta-like YP_004012450.1 manually curated; KEGG: sme:SMa0945 hypothetical protein YP_004012451.1 KEGG: rpe:RPE_2993 radical SAM domain-containing protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_004012452.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: tkm:TK90_2079 multiple antibiotic resistance (MarC)-related protein YP_004012453.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bja:blr0529 hypothetical protein YP_004012454.1 KEGG: met:M446_4555 hypothetical protein YP_004012455.1 KEGG: mes:Meso_2859 radical SAM protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM protein YP_004012456.1 KEGG: rpt:Rpal_5053 hypothetical protein YP_004012457.1 KEGG: bja:bll5905 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_004012458.1 KEGG: mdi:METDI0756 diheme cytochrome C, sulfur oxidising protein SoxA YP_004012459.1 KEGG: bja:blr3511 cytochrome C YP_004012460.1 KEGG: cak:Caul_3547 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004012461.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: mpo:Mpop_2325 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004012462.1 KEGG: avi:Avi_3651 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004012463.1 PFAM: ribosomal RNA adenine methylase transferase; KEGG: azl:AZL_c04160 ribosomal RNA adenine methylase transferase YP_004012464.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: mdi:METDI5003 long-chain fatty acid outer membrane transporter (FadL) YP_004012465.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: met:M446_5803 membrane protein involved in aromatic hydrocarbon degradation YP_004012466.1 KEGG: bid:Bind_0115 metallophosphoesterase; manually curated; PFAM: metallophosphoesterase YP_004012467.1 PFAM: glycosyl transferase group 1; KEGG: mlo:mlr2668 glycosyl transferase YP_004012468.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rpt:Rpal_4489 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004012469.1 PFAM: metallophosphoesterase; KEGG: msl:Msil_0843 metallophosphoesterase YP_004012470.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ErfK/YbiS/YcfS/YnhG family protein YP_004012471.1 KEGG: bja:bll6666 hypothetical protein YP_004012472.1 KEGG: cak:Caul_0228 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; glycoside hydrolase family 18; glycosyl transferase family 2; SMART: chitinase II YP_004012473.1 PFAM: protein of unknown function DUF218; KEGG: rpc:RPC_3338 hypothetical protein YP_004012474.1 PFAM: protein of unknown function DUF72; KEGG: azc:AZC_0328 hypothetical protein YP_004012475.1 PFAM: ROSMUCR transcriptional regulator; KEGG: MucR family transcriptional regulator YP_004012476.1 KEGG: pla:Plav_2485 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_004012477.1 KEGG: avi:Avi_5777 hypothetical protein YP_004012478.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: LysR family transcriptional regulator YP_004012479.1 TIGRFAM: thioredoxin reductase; KEGG: pla:Plav_2305 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004012480.1 KEGG: rsk:RSKD131_2975 transcriptional regulator, AsnC family; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004012481.1 PFAM: glutamine synthetase; KEGG: mva:Mvan_1603 glutamate--ammonia ligase YP_004012482.1 PFAM: protein of unknown function DUF2084; KEGG: pag:PLES_46181 hypothetical protein YP_004012483.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: geo:Geob_0806 sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004012484.1 KEGG: mlo:mlr7575 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_004012485.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; KEGG: mdi:METDI3011 phosphoadenosine phosphosulfate reductase (PapS reductase, thioredoxin dependent) (PAdoPS reductase) (3'-phosphoadenylyl-sulfate reductase) (PapS sulfotransferase); PFAM: phosphoadenosine phosphosulfate reductase YP_004012486.1 KEGG: pla:Plav_2312 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004012487.1 KEGG: xau:Xaut_2750 carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_004012488.1 KEGG: bra:BRADO2682 methylmalonyl-CoA mutase small subunit (MCM-beta); PFAM: methylmalonyl-CoA mutase YP_004012489.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: azc:AZC_1772 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_004012491.1 KEGG: coc:Coch_1549 hypothetical protein YP_004012492.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: pla:Plav_3495 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004012493.1 KEGG: mes:Meso_0691 hypothetical protein YP_004012494.1 KEGG: pla:Plav_3493 pyrrolo-quinoline quinone; PFAM: pyrrolo-quinoline quinone repeat-containing protein; SMART: pyrrolo-quinoline quinone beta-propeller repeat YP_004012495.1 KEGG: oca:OCAR_6385 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004012496.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: DNA polymerase III chi subunit HolC YP_004012497.1 PFAM: aldo/keto reductase; KEGG: aldo/keto reductase YP_004012498.1 KEGG: rce:RC1_3882 hypothetical protein YP_004012499.1 KEGG: bid:Bind_2214 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004012500.1 KEGG: xau:Xaut_4303 FmdB family regulatory protein; TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB YP_004012501.1 KEGG: rpc:RPC_4545 hypothetical protein YP_004012502.1 PFAM: peptidase M23; KEGG: bbt:BBta_1196 metalloendopeptidase YP_004012503.1 TIGRFAM: pyridoxal kinase; KEGG: mes:Meso_3224 pyridoxamine kinase; PFAM: phosphomethylpyrimidine kinase type-1 YP_004012504.1 KEGG: xau:Xaut_1974 citryl-CoA lyase; PFAM: HpcH/HpaI aldolase YP_004012505.1 KEGG: polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004012506.1 KEGG: polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004012507.1 KEGG: pcs:Pc16g10960 Pc16g10960 YP_004012508.1 KEGG: bmt:BSUIS_A1844 exodeoxyribonuclease III (xth); TIGRFAM: exodeoxyribonuclease III Xth; PFAM: endonuclease/exonuclease/phosphatase YP_004012509.1 KEGG: psl:Psta_4598 hypothetical protein YP_004012510.1 KEGG: hypothetical protein YP_004012511.1 PFAM: YadA domain-containing protein; KEGG: hypothetical protein LOC100366058 YP_004012512.1 KEGG: sco:SCO6743 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; DNA-binding protein YP_004012513.1 KEGG: pvi:Cvib_0071 hypothetical protein YP_004012514.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: rpb:RPB_3941 hypothetical protein YP_004012515.1 PFAM: Uncharacterised protein family UPF0283; KEGG: atc:AGR_C_2505 hypothetical protein YP_004012516.1 PFAM: Uncharacterised protein family UPF0324; KEGG: xau:Xaut_2660 hypothetical protein YP_004012517.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpc:RPC_1679 LysR family transcriptional regulator YP_004012518.1 KEGG: bid:Bind_3833 hypothetical protein YP_004012519.1 PFAM: phosphoglucose isomerase (PGI); KEGG: pla:Plav_0292 glucose-6-phosphate isomerase YP_004012520.1 KEGG: rlg:Rleg_0539 DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_004012521.1 PFAM: periplasmic solute binding protein; KEGG: ara:Arad_2765 zinc uptake ABC transporter YP_004012522.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: xau:Xaut_2573 LysR family transcriptional regulator YP_004012523.1 PFAM: CsbD family protein; KEGG: azl:AZL_012380 hypothetical protein YP_004012524.1 PFAM: isochorismatase hydrolase; KEGG: oca:OCAR_6243 isochorismatase hydrolase YP_004012525.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: azl:AZL_f01870 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_004012526.1 KEGG: bph:Bphy_4663 major facilitator transporter YP_004012527.1 PFAM: acriflavin resistance protein; KEGG: met:M446_0427 acriflavin resistance protein YP_004012528.1 KEGG: met:M446_0428 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004012529.1 KEGG: pla:Plav_2866 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004012530.1 KEGG: mag:amb2251 hypothetical protein YP_004012531.1 PFAM: uracil-DNA glycosylase superfamily; KEGG: pla:Plav_2864 uracil-DNA glycosylase superfamily protein YP_004012532.1 KEGG: pde:Pden_2711 hypothetical protein YP_004012533.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004012534.1 PFAM: HemY domain protein; KEGG: HemY domain protein YP_004012535.1 KEGG: rec:RHECIAT_CH0004190 hypothetical protein YP_004012536.1 PFAM: uroporphyrinogen III synthase HEM4; KEGG: pla:Plav_1350 uroporphyrinogen III synthase HEM4 YP_004012537.1 KEGG: zma:100284619 LOC100284619; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_004012538.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_004012539.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase; KEGG: pla:Plav_1343 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_004012540.1 PFAM: PRC-barrel domain protein; KEGG: rle:RL0913 PRC family protein YP_004012541.1 KEGG: npu:Npun_AF182 hypothetical protein YP_004012542.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpd:RPD_2324 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_004012543.1 KEGG: cak:Caul_2743 cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_004012544.1 PFAM: phosphoglycerate mutase; KEGG: dar:Daro_0151 phosphoglycerate/bisphosphoglycerate mutase YP_004012545.1 PFAM: alpha/beta hydrolase fold; KEGG: bbt:BBta_5597 non-heme haloperoxidase YP_004012546.1 KEGG: cbr:CBG08622 Hypothetical protein CBG08622 YP_004012547.1 KEGG: bja:blr5448 hypothetical protein YP_004012548.1 PFAM: Hep_Hag repeat-containing protein; KEGG: hmg:100209204 similar to predicted protein YP_004012549.1 KEGG: mbn:Mboo_1418 hypothetical protein YP_004012550.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: oca:OCAR_4356 outer membrane lipoprotein carrier protein LolA YP_004012551.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: rhi:NGR_c31480 DNA translocase FtsK YP_004012552.1 PFAM: aminotransferase class I and II; KEGG: xau:Xaut_1842 aminotransferase class I and II YP_004012553.1 KEGG: mex:Mext_2099 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004012554.1 PFAM: nitrogen regulatory protein P-II; KEGG: xau:Xaut_2209 nitrogen regulatory protein P-II YP_004012555.1 PFAM: YceI family protein; KEGG: hypothetical protein YP_004012556.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: rpe:RPE_0471 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_004012557.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: mlo:mll5584 enoyl-CoA hydratase YP_004012558.1 manually curated; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: atc:AGR_C_2948 probable transcriptional activator (ORF-240); SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004012559.1 KEGG: sus:acid_5771 hypothetical protein YP_004012560.1 KEGG: nwi:Nwi_2445 hypothetical protein YP_004012562.1 PFAM: pirin; KEGG: gvi:glr1823 hypothetical protein YP_004012563.1 KEGG: azc:AZC_1342 CrcB-like protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004012564.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: rpb:RPB_4709 methionine sulfoxide reductase A; PFAM: methionine sulfoxide reductase A YP_004012566.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rce:RC1_2026 deoxyribodipyrimidine photolyase family protein YP_004012567.1 PFAM: N-formylglutamate amidohydrolase; KEGG: oan:Oant_4283 N-formylglutamate amidohydrolase YP_004012568.1 KEGG: rpe:RPE_0706 histidinol-phosphate phosphatase, , inositol monophosphatase; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase YP_004012569.1 KEGG: ppe:PEPE_0118 adhesion exoprotein YP_004012570.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: azl:AZL_024080 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_004012571.1 PFAM: iron permease FTR1; KEGG: bid:Bind_0107 iron permease FTR1 YP_004012572.1 KEGG: rpb:RPB_3326 hypothetical protein YP_004012573.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: oca:OCAR_6572 protease Do subfamily; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004012574.1 KEGG: mes:Meso_0016 hypothetical protein YP_004012575.1 KEGG: bja:bll0477 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004012576.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: radical SAM protein; protein of unknown function UPF0004; KEGG: rce:RC1_2196 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_004012577.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: oan:Oant_0925 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004012578.1 KEGG: rce:RC1_3945 intracellular septation protein A, TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_004012579.1 KEGG: ccs:CCNA_03791 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004012580.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_0697 GCN5-related N-acetyltransferase YP_004012581.1 PFAM: glutathione S-transferase domain; KEGG: rec:RHECIAT_CH0002416 glutathione S-transferase protein YP_004012582.1 KEGG: mlo:mlr3234 potassium-efflux system protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_004012583.1 PFAM: TfoX domain-containing protein; KEGG: bcm:Bcenmc03_7055 TfoX domain-containing protein YP_004012584.1 KEGG: xau:Xaut_4126 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region YP_004012585.1 PFAM: protein of unknown function DUF1058; KEGG: bbk:BARBAKC583_1266 hypothetical protein YP_004012586.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: xau:Xaut_1109 antibiotic biosynthesis monooxygenase YP_004012587.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: pnu:Pnuc_1611 methylmalonyl-CoA decarboxylase YP_004012588.1 KEGG: ara:Arad_1591 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004012589.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: pla:Plav_2871 pyridoxine 5'-phosphate synthase; PFAM: pyridoxal phosphate biosynthetic protein PdxJ YP_004012590.1 PFAM: protein of unknown function DUF2062; KEGG: oan:Oant_2630 hypothetical protein YP_004012591.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: swi:Swit_3874 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004012592.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: mlo:mlr7755 GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004012593.1 KEGG: bid:Bind_2446 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase Rpb6 YP_004012594.1 KEGG: mno:Mnod_3611 hypothetical protein YP_004012595.1 KEGG: ttj:TTHA1223 hypothetical protein YP_004012596.1 KEGG: mno:Mnod_1086 LAO/AO transporter ATPase; TIGRFAM: LAO/AO transporter ATPase; PFAM: ArgK protein YP_004012597.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: bja:bll3047 pyrrolidone-carboxylate peptidase YP_004012598.1 KEGG: rpd:RPD_1920 twin-arginine translocation pathway signal YP_004012599.1 PFAM: malate/L-lactate dehydrogenase; KEGG: mno:Mnod_3707 malate/L-lactate dehydrogenase YP_004012600.1 KEGG: nha:Nham_0227 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004012601.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: mmr:Mmar10_2489 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004012602.1 PFAM: glutathione S-transferase domain; KEGG: azl:AZL_000980 glutathione S-transferase YP_004012603.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: phosphoserine phosphatase SerB; PFAM: haloacid dehalogenase YP_004012604.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004012605.1 KEGG: xau:Xaut_1488 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004012606.1 KEGG: xau:Xaut_1489 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004012607.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bra:BRADO5559 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_004012608.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3103 GCN5-related N-acetyltransferase YP_004012609.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: rce:RC1_3043 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_004012610.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: met:M446_6249 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_004012611.1 manually curated; KEGG: ara:Arad_9319 phosphinothricin N-acetyltransferase (antibiotic resistance) protein; PFAM: GCN5-related N-acetyltransferase YP_004012612.1 PFAM: peptidase S49; KEGG: peptidase S49 YP_004012613.1 PFAM: methyltransferase type 11; KEGG: pla:Plav_0724 O-methyltransferase YP_004012614.1 PFAM: protein of unknown function DUF2007; KEGG: mno:Mnod_4374 hypothetical protein YP_004012615.1 PFAM: polyprenyl synthetase; KEGG: bid:Bind_0855 polyprenyl synthetase YP_004012616.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: mex:Mext_1962 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004012617.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: sil:SPO0892 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_004012618.1 KEGG: bbk:BARBAKC583_0302 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004012619.1 KEGG: sme:SMc03935 hypothetical protein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_004012620.1 KEGG: azl:AZL_001170 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004012621.1 PFAM: stress-induced protein, KGG, repeat; KEGG: bid:Bind_3101 hypothetical protein YP_004012622.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: Orn/DAP/Arg decarboxylase 2 YP_004012623.1 SMART: response regulator receiver; KEGG: ccs:CCNA_03154 PAS-family sensor histidine kinase/receiver protein YP_004012624.1 KEGG: hha:Hhal_1971 glutaredoxin YP_004012625.1 PFAM: BA14K family protein; KEGG: rpe:RPE_2581 hypothetical protein YP_004012626.1 KEGG: xau:Xaut_4287 hypothetical protein YP_004012627.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: mag:amb0779 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/nitrile oxidoreductase YP_004012628.1 KEGG: bra:BRADO5334 hypothetical protein YP_004012629.1 PFAM: protein of unknown function DUF201; KEGG: rpe:RPE_0617 hypothetical protein YP_004012630.1 PFAM: aldehyde dehydrogenase; KEGG: avi:Avi_5719 aldehyde dehydrogenase YP_004012631.1 KEGG: rme:Rmet_5589 MscS mechanosensitive ion channel YP_004012632.1 PFAM: lipolytic protein G-D-S-L family; KEGG: rru:Rru_A3650 lipolytic protein YP_004012633.1 KEGG: xau:Xaut_1758 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012634.1 PFAM: protein of unknown function DUF214; KEGG: mno:Mnod_1778 protein of unknown function DUF214 YP_004012635.1 PFAM: protein of unknown function UPF0005; KEGG: pub:SAR11_0291 integral membrane protein YP_004012636.1 KEGG: azc:AZC_4463 hypothetical protein YP_004012637.1 KEGG: chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70 YP_004012638.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: pla:Plav_3573 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004012639.1 PFAM: transcriptional regulator domain-containing protein; KEGG: mlo:mlr2935 two-component response regulator YP_004012640.1 KEGG: mrd:Mrad2831_1950 hypothetical protein YP_004012641.1 PFAM: protein of unknown function DUF140; KEGG: mrd:Mrad2831_1952 hypothetical protein YP_004012642.1 KEGG: pla:Plav_2513 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012643.1 PFAM: hypothetical protein; KEGG: xau:Xaut_4115 hypothetical protein YP_004012644.1 PFAM: protein of unknown function DUF330; KEGG: mrd:Mrad2831_1955 hypothetical protein YP_004012645.1 PFAM: glutathione S-transferase domain; KEGG: asa:ASA_2515 glutathione S-transferase family protein YP_004012646.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_4770 antenna complex alpha/subunit beta YP_004012647.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpd:RPD_3891 antenna complex, alpha/subunit beta YP_004012648.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpt:Rpal_4770 antenna complex alpha/subunit beta YP_004012649.1 PFAM: antenna complex alpha/subunit beta; KEGG: rpc:RPC_1239 antenna complex, alpha/subunit beta YP_004012650.1 PFAM: PUCC protein; KEGG: rpc:RPC_1240 PucC protein YP_004012651.1 KEGG: pla:Plav_1095 glutathione-disulfide reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004012652.1 KEGG: pat:Patl_0430 TolC family type I secretion outer membrane protein YP_004012653.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: rpb:RPB_3386 ribose-5-phosphate isomerase A; PFAM: ribose 5-phosphate isomerase; regulatory protein DeoR YP_004012654.1 KEGG: mag:amb1321 NAD-dependent aldehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_004012655.1 KEGG: xla:398760 proline dehydrogenase (oxidase) 2 YP_004012656.1 KEGG: sme:SMa0206 response regulator YP_004012657.1 KEGG: metal-dependent hydrolase YP_004012658.1 KEGG: xau:Xaut_4330 TatD family hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004012659.1 KEGG: bmt:BSUIS_A1039 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M) YP_004012660.1 KEGG: nha:Nham_2009 DNA polymerase III subunit delta' YP_004012661.1 KEGG: bmr:BMI_I1958 hydroxyacylglutathione hydrolase, TIGRFAM: hydroxyacylglutathione hydrolase YP_004012662.1 PFAM: methyltransferase type 11; KEGG: pla:Plav_1579 methyltransferase type 11 YP_004012663.1 KEGG: rsp:RSP_1430 hypothetical protein YP_004012664.1 KEGG: dma:DMR_10690 hypothetical protein YP_004012665.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: azl:AZL_007160 serine carboxypeptidase YP_004012666.1 KEGG: bac:BamMC406_2936 flagellar basal body P-ring biosynthesis protein FlgA YP_004012667.1 PFAM: methyltransferase type 11; KEGG: art:Arth_1026 methyltransferase type 11 YP_004012668.1 KEGG: mno:Mnod_4954 hypothetical protein YP_004012669.1 KEGG: rpt:Rpal_1867 serine/threonine protein kinase; PFAM: serine/threonine-protein kinase-like domain; UspA domain-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain YP_004012670.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_3810 metallophosphoesterase YP_004012671.1 KEGG: nwi:Nwi_1148 hypothetical protein YP_004012672.1 PFAM: protein of unknown function DUF1214; KEGG: msl:Msil_1663 protein of unknown function DUF1214 YP_004012673.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: avi:Avi_1323 penicillin binding protein; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004012674.1 PFAM: protein of unknown function UPF0153; KEGG: met:M446_1114 hypothetical protein YP_004012675.1 KEGG: pla:Plav_0911 TP901-1 family phage major tail protein YP_004012676.1 KEGG: dwi:Dwil_GK17486 GK17486 gene product from transcript GK17486-RA YP_004012677.1 KEGG: xau:Xaut_3176 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004012678.1 KEGG: bbt:BBta_3068 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein YP_004012679.1 KEGG: pla:Plav_0930 17 kDa surface antigen YP_004012680.1 KEGG: TRAP-type uncharacterized transporter periplasmic protein YP_004012681.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: pzu:PHZ_c1976 acyl-CoA dehydrogenase YP_004012682.1 KEGG: rhi:NGR_c36850 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_004012684.1 PFAM: Uncharacterised conserved protein UCP032025; KEGG: pde:Pden_1779 hypothetical protein YP_004012685.1 PFAM: protein of unknown function DUF465; KEGG: rpb:RPB_1449 hypothetical protein YP_004012686.1 PFAM: protein of unknown function DUF465; KEGG: mlo:msl3793 hypothetical protein YP_004012687.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: mes:Meso_0422 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_004012688.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: tRNA synthetase class II (G H P and S) YP_004012689.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: mrd:Mrad2831_4293 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_004012690.1 KEGG: dwi:Dwil_GK14009 GK14009 gene product from transcript GK14009-RA YP_004012691.1 PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: eba:ebA5073 poly-beta-hydroxyalkanoate synthase YP_004012692.1 KEGG: saq:Sare_0728 ABC transporter YP_004012693.1 KEGG: net:Neut_0489 transglycosylase YP_004012694.1 PFAM: patatin; KEGG: patatin YP_004012695.1 KEGG: rpc:RPC_2122 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_004012696.1 PFAM: Hsp33 protein; KEGG: bja:blr1100 HSP33-like chaperonin YP_004012697.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: rpe:RPE_4883 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_004012698.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: mno:Mnod_7457 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004012699.1 PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator YP_004012700.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: azc:AZC_4032 phosphate regulon transcriptional regulatory protein; SMART: response regulator receiver YP_004012701.1 KEGG: pla:Plav_0398 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transporter regulatory protein PhoU; PFAM: PhoU family protein YP_004012702.1 TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter; KEGG: mes:Meso_3118 phosphate ABC transporter ATPase subunit; SMART: ATPase AAA YP_004012703.1 KEGG: rlt:Rleg2_0170 phosphate ABC transporter inner membrane protein PstA; TIGRFAM: phosphate ABC transporter inner membrane protein PstA; PFAM: binding-protein-dependent transporters inner membrane component YP_004012704.1 KEGG: atc:AGR_C_740 phosphate ABC transporter (permease); TIGRFAM: phosphate ABC transporter inner membrane protein PstC; PFAM: binding-protein-dependent transporters inner membrane component YP_004012705.1 KEGG: smd:Smed_0119 phosphate-binding periplasmic protein YP_004012706.1 KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004012707.1 KEGG: acr:Acry_2126 hypothetical protein YP_004012708.1 KEGG: sal:Sala_0294 glucose-methanol-choline oxidoreductase YP_004012709.1 KEGG: gyc:GYMC61_2728 hypothetical protein YP_004012710.1 KEGG: rpt:Rpal_2218 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004012711.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: bbt:BBta_3505 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_004012712.1 KEGG: cnb:CNBA4900 hypothetical protein YP_004012713.1 KEGG: ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012714.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: oca:OCAR_5708 protease do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_004012715.1 manually curated; PFAM: ATP-binding region ATPase domain protein; KEGG: pla:Plav_0305 integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein YP_004012716.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pla:Plav_0304 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_004012717.1 KEGG: ace:Acel_1570 condensin subunit Smc YP_004012718.1 KEGG: rpa:RPA4328 elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor G domain-containing protein YP_004012719.1 KEGG: rpt:Rpal_0547 hypothetical protein YP_004012720.1 KEGG: xau:Xaut_2289 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004012721.1 KEGG: bid:Bind_0392 hypothetical protein YP_004012722.1 KEGG: rpc:RPC_3504 hypothetical protein YP_004012723.1 PFAM: Ferrous iron transporter; KEGG: bmr:BMI_II378 membrane antigen YP_004012724.1 PFAM: Ferrous iron transporter; KEGG: rpc:RPC_3505 membrane antigen YP_004012725.1 PFAM: carbohydrate-selective porin OprB; KEGG: nha:Nham_2969 carbohydrate-selective porin OprB YP_004012726.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: mes:Meso_0861 manganese and iron superoxide dismutase YP_004012727.1 KEGG: acr:Acry_3203 hypothetical protein YP_004012728.1 KEGG: mlo:mlr5408 hypothetical protein YP_004012729.1 KEGG: rpa:RPA1388 hypothetical protein YP_004012730.1 KEGG: mes:Meso_3040 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004012731.1 manually curated; KEGG: hypothetical protein YP_004012732.1 KEGG: pla:Plav_1602 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004012733.1 KEGG: pan:PODANSg2663 hypothetical protein YP_004012734.1 PFAM: redoxin; KEGG: azl:AZL_d01150 thiol:disulfide interchange protein YP_004012735.1 KEGG: FAD linked oxidase; PFAM: FAD linked oxidase domain protein YP_004012737.1 KEGG: lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A YP_004012738.1 KEGG: rlt:Rleg2_1806 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004012739.1 TIGRFAM: thymidylate kinase; KEGG: azc:AZC_2173 thymidylate kinase; PFAM: thymidylate kinase YP_004012740.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: amc:MADE_00668 DNA ligase YP_004012741.1 PFAM: protein of unknown function DUF1491; KEGG: oca:OCAR_6628 hypothetical protein YP_004012742.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, subunit alpha; KEGG: msl:Msil_1071 DNA polymerase III alpha subunit; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004012743.1 KEGG: pzu:PHZ_c3267 nucleotidyltransferase/DNA polymerase involved in DNA repair YP_004012744.1 KEGG: rcu:RCOM_1944040 hypothetical protein YP_004012745.1 TIGRFAM: gamma-glutamyltransferase; KEGG: pde:Pden_0660 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_004012746.1 PFAM: aldehyde dehydrogenase; KEGG: pzu:PHZ_c1634 succinate-semialdehyde dehydrogenase YP_004012747.1 PFAM: MscS Mechanosensitive ion channel; KEGG: oan:Oant_1862 MscS mechanosensitive ion channel YP_004012748.1 PFAM: phosphate-starvation-inducible E-like; KEGG: rpc:RPC_4082 phosphate-starvation-inducible E YP_004012749.1 KEGG: bbt:BBta_6226 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004012750.1 KEGG: dal:Dalk_3110 hypothetical protein YP_004012752.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004012753.1 KEGG: msl:Msil_0741 beta-lactamase YP_004012754.1 KEGG: mag:amb1588 Holliday junction resolvase; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004012755.1 PFAM: Auxin Efflux Carrier; KEGG: bra:BRADO4498 hypothetical protein YP_004012756.1 PFAM: protein of unknown function DUF205; KEGG: rpe:RPE_3375 glycerol-3-phosphate acyltransferase PlsY YP_004012757.1 KEGG: rpe:RPE_3377 DNA processing protein DprA, TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004012758.1 KEGG: rle:RL1147 hypothetical protein YP_004012759.1 KEGG: mno:Mnod_1296 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004012760.1 KEGG: cyh:Cyan8802_0485 hypothetical protein YP_004012762.1 KEGG: mch:Mchl_5749 hypothetical protein YP_004012763.1 KEGG: bbt:BBta_p0100 insertion sequence IS21-like; ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: ATPase AAA YP_004012764.1 PFAM: peptidase S24/S26A/S26B, conserved region; KEGG: dba:Dbac_0176 peptidase S24 and S26 domain protein YP_004012765.1 KEGG: cag:Cagg_0591 hypothetical protein YP_004012766.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004012767.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004012768.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004012769.1 KEGG: azc:AZC_0364 transcriptional regulator YP_004012770.1 KEGG: scl:sce7282 hypothetical protein YP_004012771.1 PFAM: glycosyl transferase group 1; hypothetical protein; KEGG: zmn:Za10_0102 glycosyl transferase group 1 YP_004012773.1 KEGG: met:M446_3171 hypothetical protein YP_004012774.1 KEGG: cpc:Cpar_1823 hypothetical protein YP_004012775.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nha:Nham_2781 NAD-dependent epimerase/dehydratase YP_004012776.1 KEGG: nha:Nham_2780 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004012777.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase YP_004012778.1 PFAM: capsule polysaccharide biosynthesis protein; KEGG: swi:Swit_2454 capsule polysaccharide biosynthesis protein YP_004012779.1 PFAM: polysaccharide export protein; KEGG: mch:Mchl_2758 polysaccharide export protein YP_004012780.1 PFAM: glycosyl transferase group 1; KEGG: pol:Bpro_4936 glycosyl transferase, group 1 YP_004012781.1 KEGG: ara:Arad_9129 hypothetical protein YP_004012782.1 KEGG: gdi:GDI_2405 hypothetical protein; PFAM: radical SAM domain protein; hypothetical protein; SMART: Tetratricopeptide repeat YP_004012783.1 KEGG: mac:MA1420 cell surface protein YP_004012784.1 KEGG: azc:AZC_0039 WcbD protein YP_004012785.1 PFAM: ABC transporter; KEGG: azc:AZC_0040 capsule polysaccharide export inner-membrane protein YP_004012786.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ara:Arad_9137 capsule polysaccharide export transporter permease protein YP_004012787.1 KEGG: azc:AZC_0042 ABC-2 transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012788.1 PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_5364 glycosyl transferase group 1 YP_004012789.1 PFAM: transposase IS3/IS911 family protein; KEGG: azl:AZL_f01430 transposase YP_004012790.1 KEGG: rsq:Rsph17025_3725 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_004012791.1 KEGG: bja:bll2159 transposase YP_004012792.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_4819 IS66 Orf2 family protein YP_004012793.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: pde:Pden_4824 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_004012794.1 PFAM: PilT protein domain protein; KEGG: sme:SMc00687 hypothetical protein YP_004012795.1 KEGG: sme:SMc00686 hypothetical protein YP_004012796.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: net:Neut_2579 relaxase/mobilization nuclease family protein YP_004012797.1 KEGG: asa:ASA_3473 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004012798.1 PFAM: protein of unknown function DUF927; KEGG: lpf:lpl1073 hypothetical protein YP_004012799.1 KEGG: met:M446_6723 prophage CP4-57 regulatory YP_004012800.1 KEGG: pno:SNOG_09052 hypothetical protein YP_004012801.1 PFAM: integrase family protein; KEGG: rhi:NGR_c11660 DNA integration/recombination/invertion protein YP_004012802.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: ara:Arad_0300 penicillin-insensitive murein endopeptidase YP_004012803.1 PFAM: aminotransferase class-III; KEGG: bid:Bind_3215 aminotransferase class-III YP_004012804.1 PFAM: protein of unknown function DUF2147; KEGG: nha:Nham_2677 hypothetical protein YP_004012805.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: bbt:BBta_2973 protein export membrane protein YP_004012806.1 KEGG: fgr:FG05929.1 hypothetical protein YP_004012807.1 KEGG: nha:Nham_1027 hypothetical protein YP_004012808.1 PFAM: TROVE domain-containing protein; KEGG: mrd:Mrad2831_1806 TROVE domain-containing protein YP_004012809.1 TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: rpc:RPC_1896 precorrin 6A synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004012810.1 KEGG: vap:Vapar_6049 shikimate/quinate 5-dehydrogenase YP_004012811.1 KEGG: rsh:Rsph17029_0613 hypothetical protein YP_004012812.1 TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; radical SAM protein; KEGG: rru:Rru_A3548 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; SMART: Elongator protein 3/MiaB/NifB YP_004012813.1 PFAM: periplasmic binding protein; KEGG: rpc:RPC_4256 periplasmic binding protein YP_004012814.1 KEGG: rpc:RPC_4255 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004012815.1 KEGG: nha:Nham_3730 transporter permease protein; manually curated; PFAM: transporter permease YP_004012816.1 PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: tgr:Tgr7_1031 glutamate--tRNA ligase YP_004012817.1 PFAM: cysteine-rich small domain; KEGG: rpd:RPD_2921 hypothetical protein YP_004012818.1 KEGG: rpe:RPE_3122 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004012819.1 TIGRFAM: peptide deformylase; KEGG: mes:Meso_0394 peptide deformylase; PFAM: formylmethionine deformylase YP_004012820.1 PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_4141 alpha/beta hydrolase protein YP_004012821.1 KEGG: mlo:mlr3700 two-component response regulator; PFAM: response regulator receiver; Sigma-70 region 4 type 2; SMART: response regulator receiver YP_004012822.1 KEGG: mes:Meso_3108 hypothetical protein YP_004012823.1 KEGG: jan:Jann_3565 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004012824.1 KEGG: rpc:RPC_2870 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004012825.1 KEGG: bja:bll4288 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver YP_004012826.1 KEGG: smd:Smed_5952 signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein YP_004012828.1 PFAM: protein of unknown function DUF1008; KEGG: avi:Avi_2731 hypothetical protein YP_004012829.1 PFAM: radical SAM protein; HemN domain protein; KEGG: rpe:RPE_3151 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004012830.1 KEGG: rce:RC1_3856 TonB-dependent hemoglobin; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_004012831.1 KEGG: bcs:BCAN_A1707 TonB-system energizer ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel YP_004012832.1 KEGG: mlo:mll4167 ExbD, uptake of enterochelin; TonB-dependent uptake of B colicins; TIGRFAM: TonB system transporter ExbD; PFAM: biopolymertransporter ExbD/TolR YP_004012833.1 TIGRFAM: TonB family protein; KEGG: nwi:Nwi_2038 TonB like protein YP_004012834.1 KEGG: rpc:RPC_3223 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004012835.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: rpe:RPE_4652 RND family efflux transporter MFP subunit YP_004012836.1 PFAM: acriflavin resistance protein; KEGG: oca:OCAR_6818 acriflavin resistance protein YP_004012837.1 KEGG: hoh:Hoch_3233 serine/threonine protein kinase YP_004012838.1 KEGG: ttj:TTHA0644 hypothetical protein YP_004012839.1 KEGG: msl:Msil_0033 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004012840.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rhi:NGR_c02820 flagellar basal body-associated protein FliL YP_004012841.1 PFAM: flagellar L-ring protein; KEGG: msl:Msil_0031 flagellar L-ring protein YP_004012842.1 KEGG: oan:Oant_4206 hypothetical protein YP_004012843.1 PFAM: flagellar P-ring protein; KEGG: met:M446_3678 flagellar basal body P-ring protein YP_004012844.1 KEGG: bid:Bind_3652 flagellar basal body P-ring biosynthesis protein-like protein; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_004012845.1 KEGG: bid:Bind_3653 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004012846.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mdi:METDI0599 flagellar hook-basal body complex protein FliE YP_004012847.1 KEGG: msl:Msil_0025 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein YP_004012848.1 PFAM: flagellar basal body rod protein; KEGG: bid:Bind_3656 flagellar basal body rod protein FlgB YP_004012849.1 PFAM: type III secretion exporter; KEGG: bja:bll6877 flagellar biosynthesis protein FlhB YP_004012850.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: azc:AZC_0641 FliN protein YP_004012851.1 KEGG: mlo:mll2905 flagellar motor protein MotA YP_004012852.1 PFAM: protein of unknown function DUF1217; KEGG: rpe:RPE_1148 hypothetical protein YP_004012853.1 KEGG: mrd:Mrad2831_4814 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer YP_004012854.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rpe:RPE_1198 response regulator receiver modulated CheB methylesterase; SMART: response regulator receiver YP_004012855.1 PFAM: CheD family protein; KEGG: hch:HCH_00462 chemoreceptor glutamine deamidase CheD YP_004012856.1 PFAM: MCP methyltransferase CheR-type; KEGG: azl:AZL_023450 chemotaxis protein methyltransferase; SMART: MCP methyltransferase CheR-type YP_004012857.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bbt:BBta_2145 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein YP_004012858.1 KEGG: azl:AZL_023430 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004012859.1 KEGG: rpe:RPE_1193 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein YP_004012860.1 KEGG: rpe:RPE_1192 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004012861.1 KEGG: bsu:BSU04710 anti-anti-sigma factor (antagonist of RsbW) YP_004012862.1 PFAM: flagellar motor switch protein FliG; KEGG: bid:Bind_2807 flagellar motor switch protein FliG YP_004012863.1 PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: met:M446_3213 flagellar motor switch protein FliM YP_004012864.1 KEGG: rpc:RPC_1123 hypothetical protein YP_004012865.1 KEGG: mrd:Mrad2831_1696 hypothetical protein YP_004012866.1 KEGG: mch:Mchl_0704 hypothetical protein YP_004012867.1 KEGG: xtr:733966 spindle assembly 6 homolog YP_004012868.1 PFAM: type III secretion system inner membrane R protein; KEGG: rpc:RPC_1119 flagellar biosynthesis protein FliR YP_004012869.1 KEGG: bid:Bind_3588 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004012870.1 KEGG: rpc:RPC_1117 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_004012871.1 PFAM: flagellar hook capping protein; KEGG: bid:Bind_3552 flagellar basal body rod modification protein YP_004012872.1 PFAM: flagellar FlbT family protein; KEGG: mrd:Mrad2831_1703 flagellar biosynthesis repressor FlbT YP_004012873.1 PFAM: flagellar FlaF family protein; KEGG: mes:Meso_0276 flagellar biosynthesis regulatory protein FlaF YP_004012874.1 KEGG: bid:Bind_3555 flagellar hook-associated protein FlgL YP_004012875.1 KEGG: rpe:RPE_1173 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein YP_004012876.1 KEGG: bid:Bind_3557 flagellar hook protein FlgE; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004012877.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; KEGG: mdi:METDI0663 flagellum-specific ATP synthase; SMART: ATPase AAA YP_004012878.1 KEGG: bja:blr6884 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; flagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004012879.1 KEGG: bra:BRADO6065 response regulator receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver YP_004012880.1 PFAM: lytic transglycosylase catalytic; KEGG: met:M446_3220 lytic transglycosylase catalytic YP_004012881.1 PFAM: flagellar hook-length control protein-like, C-terminal domain; KEGG: spw:SPCG_1750 cell wall surface anchor family protein YP_004012882.1 KEGG: mpo:Mpop_0611 chemotaxis protein YP_004012883.1 KEGG: mrd:Mrad2831_1679 OmpA/MotB domain-containing protein; manually curated; PFAM: OmpA/MotB domain protein YP_004012884.1 KEGG: mdi:METDI0609 hypothetical protein YP_004012885.1 KEGG: mea:Mex_1p0454 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein YP_004012886.1 PFAM: flagellin domain protein; KEGG: rpe:RPE_1165 flagellin YP_004012887.1 KEGG: rce:RC1_0897 methyl-accepting chemotaxis protein, PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer YP_004012888.1 KEGG: rpd:RPD_1244 hypothetical protein YP_004012889.1 KEGG: mno:Mnod_1691 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_004012890.1 KEGG: rpd:RPD_3677 CheW-like protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004012891.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: nmu:Nmul_A1718 NADH:flavin oxidoreductase/NADH oxidase YP_004012892.1 KEGG: mno:Mnod_2431 peptidase C14 caspase catalytic subunit P20; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_004012893.1 PFAM: extracellular ligand-binding receptor; KEGG: bra:BRADO6575 ABC-type branched-chain amino acid transporter, periplasmic component YP_004012894.1 KEGG: bid:Bind_3258 peptidyl-dipeptidase DCP; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004012895.1 PFAM: UspA domain-containing protein; KEGG: atc:AGR_C_3179 hypothetical protein YP_004012896.1 PFAM: Host attachment protein; KEGG: bid:Bind_2719 hypothetical protein YP_004012897.1 KEGG: oan:Oant_0565 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_004012898.1 KEGG: pmx:PERMA_0004 hypothetical protein YP_004012899.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: xau:Xaut_4726 carbamoyl-phosphate synthase L chain ATP-binding YP_004012900.1 KEGG: rpe:RPE_1043 hypothetical protein YP_004012901.1 KEGG: rfr:Rfer_3317 lipase YP_004012902.1 PFAM: cupin; KEGG: dar:Daro_2846 hypothetical protein YP_004012903.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:bll4150 hypothetical protein YP_004012904.1 KEGG: oan:Oant_0479 hypothetical protein YP_004012905.1 KEGG: bja:blr7133 hypothetical protein YP_004012906.1 KEGG: bbt:BBta_7572 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004012907.1 manually curated; KEGG: rpc:RPC_0532 shikimate kinase; PFAM: shikimate kinase YP_004012908.1 KEGG: mno:Mnod_1133 hypothetical protein YP_004012909.1 KEGG: rpd:RPD_0296 tyrosine recombinase XerD; manually curated; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_004012910.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azl:AZL_019520 acetyltransferase YP_004012911.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azc:AZC_4644 enoyl-(acyl carrier protein) reductase YP_004012912.1 PFAM: beta-ketoacyl synthase; KEGG: oan:Oant_0740 3-oxoacyl-(acyl carrier protein) synthase I YP_004012913.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: azc:AZC_4642 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004012914.1 PFAM: ferric-uptake regulator; KEGG: sme:SMc00329 iron response regulator protein YP_004012915.1 PFAM: protein of unknown function DUF2237; KEGG: bid:Bind_0467 hypothetical protein YP_004012916.1 KEGG: rrs:RoseRS_2053 peptidase S9 prolyl oligopeptidase YP_004012917.1 KEGG: lhk:LHK_01273 membrane-associated oxidoreductase YP_004012918.1 TIGRFAM: methionine synthase; KEGG: oan:Oant_0197 B12-dependent methionine synthase; PFAM: dihydropteroate synthase DHPS; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_004012919.1 KEGG: etr:ETAE_2419 acid shock protein precursor YP_004012920.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ara:Arad_8260 sugar ABC transporter YP_004012921.1 KEGG: xfm:Xfasm12_1824 nitrate transporter ATP-binding protein; PFAM: ABC nitrate/sulphonate/bicarbonate family transporter ATPase; ABC transporter; SMART: ATPase AAA YP_004012922.1 KEGG: vvu:VV1_2101 ABC-type histidine transporter, ATPase component; PFAM: ABC transporter; SMART: ATPase AAA YP_004012923.1 KEGG: extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004012924.1 PFAM: NLP/P60 protein; KEGG: mdi:METDI0995 hypothetical protein YP_004012925.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: bbt:BBta_7039 leucine aminopeptidase YP_004012926.1 PFAM: peptidase A24A prepilin type IV; KEGG: rpd:RPD_3518 peptidase A24A, prepilin type IV YP_004012927.1 PFAM: Flp/Fap pilin component; KEGG: bja:bsl4812 fimbriae associated protein YP_004012928.1 PFAM: Domain of unknown function DUF1849; KEGG: bid:Bind_1791 hypothetical protein YP_004012929.1 KEGG: rpc:RPC_1247 hypothetical protein YP_004012930.1 PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase YP_004012931.1 KEGG: rec:RHECIAT_CH0002699 probable transcriptional regulator protein, TetR family; manually curated; PFAM: regulatory protein TetR YP_004012932.1 manually curated; KEGG: nhl:Nhal_1844 hypothetical protein YP_004012933.1 PFAM: Hly-III family protein; KEGG: azl:AZL_002160 hypothetical protein YP_004012934.1 KEGG: mes:Meso_3269 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004012935.1 PFAM: amidase; KEGG: bte:BTH_I3161 6-aminohexanoate-cyclic-dimer hydrolase YP_004012936.1 PFAM: methyltransferase type 11; KEGG: mar:MAE_59960 methyltransferase YP_004012937.1 KEGG: rsq:Rsph17025_3640 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_004012938.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_1358 3-ketoacyl-(acyl-carrier-protein) reductase YP_004012939.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: pde:Pden_2785 FxsA cytoplasmic membrane protein YP_004012940.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: azc:AZC_4600 mitochondrial import inner membrane translocase YP_004012941.1 PFAM: MltA domain protein; 3D domain-containing protein; KEGG: bmr:BMI_I2097 transglycosylase-related protein YP_004012942.1 KEGG: met:M446_1376 Smr protein/MutS2; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004012943.1 TIGRFAM: glucan exporter ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: bmi:BMEA_A1039 glucan exporter ATP-binding protein; SMART: ATPase AAA YP_004012944.1 PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2 YP_004012945.1 PFAM: lipid A biosynthesis domain protein; KEGG: azl:AZL_e02820 lipid-A-disaccharide synthase YP_004012946.1 KEGG: azc:AZC_3179 hypothetical protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004012947.1 TIGRFAM: glycyl-tRNA synthetase subunit beta; KEGG: rpc:RPC_4348 glycyl-tRNA synthetase subunit beta YP_004012948.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: azl:AZL_018710 gluconate 2-dehydrogenase YP_004012949.1 manually curated; PFAM: DEAD/DEAH box helicase domain protein; helicase; DbpA RNA-binding domain protein; KEGG: mlo:mlr4393 DEAD-box protein, ATP-independent RNA helicase; SMART: DEAD-like helicase ; helicase YP_004012950.1 PFAM: protein of unknown function DUF188; KEGG: azc:AZC_4000 hypothetical protein YP_004012951.1 KEGG: mno:Mnod_5628 hypothetical protein YP_004012952.1 PFAM: methyltransferase type 11; KEGG: rec:RHECIAT_PA0000348 probable methyltransferase protein YP_004012953.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: rfr:Rfer_2478 thiamine pyrophosphate enzyme-like TPP binding protein YP_004012954.1 KEGG: kfl:Kfla_2584 hypothetical protein YP_004012955.1 KEGG: rpt:Rpal_2963 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004012956.1 KEGG: met:M446_0697 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004012957.1 PFAM: lytic transglycosylase catalytic; KEGG: met:M446_0698 lytic transglycosylase catalytic YP_004012958.1 PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH01379 hydrolase protein YP_004012959.1 PFAM: transport-associated; KEGG: OmpA/MotB domain protein YP_004012960.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: pla:Plav_2730 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004012961.1 KEGG: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase subunit beta; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase subunit beta, external 1 domain; RNA polymerase Rpb2 domain 7 YP_004012962.1 KEGG: rhi:NGR_c11820 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12 YP_004012963.1 PFAM: ribosomal protein L10; KEGG: msl:Msil_3866 ribosomal protein L10 YP_004012964.1 KEGG: bra:BRADO3049 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004012965.1 TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11-like; KEGG: pla:Plav_2725 ribosomal protein L11; SMART: ribosomal protein L11 YP_004012966.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: pla:Plav_2724 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein YP_004012967.1 KEGG: azc:AZC_0881 translocation complex protein; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004012968.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: mno:Mnod_5461 sodium/hydrogen exchanger YP_004012969.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM protein; KEGG: bav:BAV0208 radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_004012970.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: xau:Xaut_1837 ParB-like partition protein; SMART: ParB domain protein nuclease YP_004012971.1 manually curated; KEGG: xau:Xaut_1836 cobyrinic acid ac-diamide synthase YP_004012972.1 manually curated; TIGRFAM: methyltransferase GidB; KEGG: pla:Plav_1275 methyltransferase GidB; PFAM: glucose inhibited division protein YP_004012973.1 KEGG: mta:Moth_0606 hypothetical protein YP_004012974.1 KEGG: mag:amb3985 hypothetical protein YP_004012975.1 KEGG: mex:Mext_2546 hypothetical protein YP_004012976.1 KEGG: bbt:BBta_1811 hypothetical protein YP_004012977.1 KEGG: rce:RC1_2810 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004012978.1 KEGG: rpe:RPE_0803 signal-transduction protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_004012979.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; KEGG: pla:Plav_1272 tRNA modification GTPase TrmE; SMART: AAA ATPase YP_004012980.1 KEGG: rce:RC1_2806 hypothetical protein YP_004012981.1 KEGG: rlg:Rleg_4905 transposase IS66 YP_004012982.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004012983.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004012984.1 KEGG: met:M446_1666 NUDIX hydrolase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase YP_004012985.1 TIGRFAM: pantothenate kinase; KEGG: mch:Mchl_2777 pantothenate kinase YP_004012986.1 KEGG: xau:Xaut_2288 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase-like YP_004012987.1 manually curated; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mrd:Mrad2831_3644 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain YP_004012988.1 PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_3645 major facilitator transporter YP_004012989.1 KEGG: mch:Mchl_0961 hypothetical protein YP_004012990.1 KEGG: met:M446_1373 protein-export protein SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_004012993.1 KEGG: aav:Aave_3811 autoinducer synthesis protein; PFAM: autoinducer synthesis protein YP_004012994.1 KEGG: cja:CJA_1230 two-component transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_004012995.1 KEGG: mch:Mchl_3680 hypothetical protein YP_004012996.1 SMART: regulatory protein LuxR; KEGG: aca:ACP_1680 hypothetical protein YP_004012997.1 SMART: exonuclease; TIGRFAM: DNA polymerase III epsilon subunit; KEGG: rpt:Rpal_0303 DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III YP_004012998.1 TIGRFAM: dephospho-CoA kinase; KEGG: oca:OCAR_4387 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004012999.1 KEGG: shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase YP_004013000.1 KEGG: mpo:Mpop_1491 maf protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_004013001.1 PFAM: protein of unknown function DUF299; KEGG: azc:AZC_0001 hypothetical protein YP_004013002.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: mlo:mll4487 uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_004013003.1 PFAM: Uncharacterised protein family UPF0093; KEGG: mpo:Mpop_1496 hypothetical protein YP_004013004.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: transcription termination factor Rho; SMART: Cold shock protein; ATPase AAA YP_004013005.1 KEGG: cvi:CV_2527 transmembrane regulator PrtR YP_004013006.1 KEGG: hypothetical protein YP_004013007.1 KEGG: rce:RC1_0296 hypothetical protein YP_004013008.1 KEGG: rle:pRL110527 hypothetical protein YP_004013009.1 KEGG: vap:Vapar_5525 glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related YP_004013010.1 KEGG: msl:Msil_0406 hypothetical protein YP_004013011.1 KEGG: rru:Rru_A3300 ABC transporter component; manually curated; PFAM: ABC transporter domain-containing protein; ABC transporter related YP_004013012.1 PFAM: glycoside hydrolase; KEGG: rru:Rru_A3299 glycoside hydrolase family protein YP_004013013.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Xylulose 5-phosphate/fructose 6-phosphate phosphoketolase-like; KEGG: pzu:PHZ_p0184 phosphoketolase YP_004013014.1 PFAM: amylo-alpha-16-glucosidase; KEGG: rpd:RPD_1143 amylo-alpha-1,6-glucosidase YP_004013015.1 KEGG: mlo:msl4620 hypothetical protein YP_004013016.1 SMART: peptidase S16; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bja:blr6174 ATP-dependent protease La; PFAM: peptidase S16; ATPase AAA central domain protein YP_004013017.1 KEGG: swi:Swit_1147 molecular chaperone (small heat shock protein)-like protein YP_004013018.1 KEGG: oan:Oant_4293 hypothetical protein YP_004013019.1 KEGG: bra:BRADO6148 glutamate/aspartate ABC transporter (substrate binding protein); PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004013020.1 KEGG: rru:Rru_A2088 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004013021.1 KEGG: met:M446_4545 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004013022.1 KEGG: bra:BRADO6145 glutamate/aspartate ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004013023.1 KEGG: glo:Glov_1412 hypothetical protein YP_004013024.1 KEGG: prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein YP_004013025.1 KEGG: rce:RC1_1638 RNA polymerase sigma-70 factor, ECF family protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004013026.1 KEGG: yen:YE1952 D-alanine/D-serine/glycine permease YP_004013027.1 KEGG: protein of unknown function DUF88 YP_004013029.1 PFAM: acriflavin resistance protein; KEGG: smd:Smed_3774 acriflavin resistance protein YP_004013030.1 KEGG: transport/efflux transmembrane protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004013031.1 PFAM: regulatory protein TetR; KEGG: rhi:NGR_b18920 transcriptional regulator protein, TetR family YP_004013032.1 PFAM: protein of unknown function DUF992; KEGG: oca:OCAR_7171 hypothetical protein YP_004013033.1 PFAM: protein of unknown function DUF1022; KEGG: azl:AZL_002570 hypothetical protein YP_004013034.1 PFAM: glycosyl transferase family 39; KEGG: rpb:RPB_3657 glycosyl transferase YP_004013035.1 KEGG: alv:Alvin_1358 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein YP_004013036.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: bid:Bind_0823 ATP-dependent chaperone ClpB; SMART: AAA ATPase YP_004013037.1 PFAM: MOSC domain containing protein; KEGG: pla:Plav_1750 MOSC domain-containing protein YP_004013038.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: mag:amb2536 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004013039.1 KEGG: atc:AGR_L_1350 hypothetical protein YP_004013040.1 KEGG: nha:Nham_0469 HemK family modification methylase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase type 11 YP_004013041.1 KEGG: avi:Avi_3955 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein YP_004013042.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: rec:RHECIAT_CH0004025 phosphoenolpyruvate--protein phosphotransferase protein (enzyme I of the phosphotransferase system); SMART: GAF domain protein YP_004013043.1 KEGG: azc:AZC_4490 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004013044.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: xau:Xaut_3086 ubiquinone biosynthesis O-methyltransferase; PFAM: methyltransferase type 11 YP_004013045.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mdi:METDI3680 acetyltransferase YP_004013046.1 KEGG: eok:G2583_4491 chromosomal replication initiator protein DnaA YP_004013047.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: met:M446_4608 YbaK/prolyl-tRNA synthetase associated region YP_004013048.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: oca:OCAR_4090 hydrolase Sll0601 YP_004013049.1 KEGG: mex:Mext_3277 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_004013050.1 PFAM: phosphoribosyltransferase; KEGG: azc:AZC_4295 competence protein F YP_004013051.1 KEGG: xau:Xaut_3105 methyltransferase type 11; manually curated; PFAM: methyltransferase type 11 YP_004013052.1 KEGG: pap:PSPA7_5333 hypothetical protein YP_004013053.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: membrane-bound metal-dependent hydrolase YP_004013054.1 KEGG: bgl:bglu_4p1050 hypothetical protein YP_004013055.1 KEGG: rpa:RPA2190 ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013056.1 PFAM: peptidase M16 domain protein; KEGG: pla:Plav_0291 peptidase M16 domain-containing protein YP_004013057.1 PFAM: peptidase M16 domain protein; KEGG: xau:Xaut_2204 peptidase M16 domain-containing protein YP_004013058.1 KEGG: ssl:SS1G_07101 hypothetical protein YP_004013059.1 KEGG: ddr:Deide_10670 peptidase M23/M37, precursor YP_004013060.1 PFAM: globin; KEGG: globin YP_004013061.1 KEGG: met:M446_2622 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004013062.1 KEGG: msl:Msil_0125 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004013063.1 KEGG: mpo:Mpop_0238 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004013064.1 PFAM: protein of unknown function DUF1656; KEGG: cti:RALTA_B1729 conserved hypothetical protein; associated to secretion protein and transporter YP_004013065.1 PFAM: fusaric acid resistance protein conserved region; KEGG: mrd:Mrad2831_2406 fusaric acid resistance protein region YP_004013066.1 KEGG: mdi:METDI4463 transcriptional regulator (MarR family); PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004013067.1 KEGG: sat:SYN_02414 hypothetical protein; PFAM: proteinase inhibitor I2 Kunitz metazoa; SMART: proteinase inhibitor I2 Kunitz metazoa YP_004013068.1 KEGG: hypothetical protein YP_004013069.1 PFAM: RimK domain protein ATP-grasp; KEGG: ppu:PP_3706 hypothetical protein YP_004013070.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; PAS fold domain protein; KEGG: pag:PLES_01771 aerotaxis transducer Aer2; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004013071.1 PFAM: heat shock protein DnaJ domain protein; KEGG: heat shock protein DnaJ domain protein YP_004013072.1 TIGRFAM: capsular exopolysaccharide family; KEGG: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_004013073.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; manually curated; PFAM: integrase YP_004013074.1 KEGG: AOT6; amino acid transporter YP_004013075.1 PFAM: O-antigen polymerase; KEGG: hypothetical protein YP_004013076.1 PFAM: sugar transferase; KEGG: gwc:GWCH70_3256 undecaprenyl-phosphate galactose phosphotransferase YP_004013077.1 KEGG: nml:Namu_0758 YhgE/Pip N-terminal domain protein YP_004013078.1 PFAM: integrase family protein; KEGG: avi:Avi_6147 integrase YP_004013079.1 KEGG: ote:Oter_1207 hypothetical protein YP_004013080.1 KEGG: nwi:Nwi_0274 hypothetical protein YP_004013081.1 KEGG: sit:TM1040_1114 hypothetical protein YP_004013082.1 PFAM: protein of unknown function UCP030771; KEGG: oan:Oant_2305 hypothetical protein YP_004013083.1 KEGG: azl:AZL_019010 hypothetical protein YP_004013084.1 PFAM: peptidase U35 phage prohead HK97; KEGG: rsq:Rsph17025_2821 peptidase U35, phage prohead HK97 YP_004013085.1 KEGG: rsq:Rsph17025_2822 lambda family phage portal protein; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda YP_004013086.1 KEGG: bja:blr1345 hypothetical protein YP_004013087.1 KEGG: dme:Dmel_CG2269 CG2269 gene product from transcript CG2269-RC YP_004013089.1 PFAM: terminase GpA; KEGG: oan:Oant_2309 phage terminase GpA YP_004013090.1 KEGG: nha:Nham_2393 hypothetical protein YP_004013091.1 KEGG: xau:Xaut_3437 hypothetical protein; TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4 YP_004013092.1 KEGG: rde:RD1_2485 hypothetical protein YP_004013093.1 KEGG: jan:Jann_1998 hypothetical protein YP_004013094.1 KEGG: bpm:BURPS1710b_2550 hypothetical protein YP_004013095.1 KEGG: pop:POPTR_202005 hypothetical protein YP_004013096.1 KEGG: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004013097.1 PFAM: protein of unknown function DUF927; KEGG: zinc-binding domain of primase-helicase family protein YP_004013098.1 KEGG: rfr:Rfer_1231 hypothetical protein YP_004013099.1 PFAM: Domain of unknown function DUF1814; KEGG: pph:Ppha_1053 hypothetical protein YP_004013100.1 manually curated; KEGG: rpe:RPE_2346 hypothetical protein YP_004013101.1 KEGG: rmu:RMDY18_09610 methyl-accepting chemotaxis protein YP_004013102.1 PFAM: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator YP_004013103.1 PFAM: protein of unknown function DUF81; KEGG: tgr:Tgr7_2424 protein of unknown function DUF81 YP_004013104.1 PFAM: protein of unknown function DUF81; KEGG: swp:swp_3794 hypothetical protein YP_004013105.1 PFAM: conjugation TrbI family protein; KEGG: net:Neut_2539 conjugation TrbI family protein YP_004013106.1 KEGG: eba:p2B6 conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX YP_004013107.1 KEGG: hna:Hneap_1665 conjugal transfer protein YP_004013108.1 KEGG: kpe:KPK_1289 P-type conjugative transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein YP_004013109.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: kpe:KPK_1290 P-type conjugative transfer protein TrbJ YP_004013110.1 KEGG: net:Neut_2552 CagE, TrbE, VirB component of type IV transporter system; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: ATPase AAA YP_004013111.1 KEGG: net:Neut_2553 conjugal transfer protein TrbD YP_004013112.1 PFAM: Conjugal transfer protein TrbC; KEGG: bam:Bamb_6634 conjugal transfer protein TrbC YP_004013113.1 KEGG: net:Neut_2555 type II secretion system protein E; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E YP_004013114.1 KEGG: xfa:XFa0001 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004013115.1 KEGG: ecb:100056004 hypothetical protein LOC100056004 YP_004013116.1 KEGG: hypothetical protein YP_004013117.1 KEGG: app:CAP2UW1_4642 hypothetical protein; TIGRFAM: conjugative transfer signal peptidase TraF; PFAM: peptidase S26, conserved region YP_004013118.1 PFAM: TRAG family protein; KEGG: ajs:Ajs_4317 conjugal transfer coupling protein TraG YP_004013119.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: net:Neut_2579 relaxase/mobilization nuclease family protein YP_004013120.1 KEGG: bxe:Bxe_C0464 hypothetical protein YP_004013121.1 KEGG: bcv:Bcav_0114 amidohydrolase YP_004013122.1 KEGG: oca:OCAR_4547 sulfite reductase [NADPH] flavoprotein, alpha-component YP_004013123.1 KEGG: rop:ROP_42010 arylsulfatase YP_004013125.1 PFAM: protein of unknown function DUF805; KEGG: vex:VEA_001758 predicted membrane protein YP_004013126.1 KEGG: xce:Xcel_2652 hypothetical protein YP_004013127.1 KEGG: str:Sterm_1370 hypothetical protein YP_004013128.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004013129.1 PFAM: protein of unknown function DUF323; KEGG: ter:Tery_1731 hypothetical protein YP_004013130.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: npu:Npun_F4892 RNA-directed DNA polymerase (reverse transcriptase) YP_004013131.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_1256 XRE family plasmid maintenance system antidote protein; SMART: helix-turn-helix domain protein YP_004013132.1 PFAM: plasmid maintenance system killer; KEGG: mlo:mlr1576 hypothetical protein YP_004013133.1 KEGG: paa:Paes_2388 hypothetical protein YP_004013134.1 PFAM: protein of unknown function DUF323; KEGG: WD40 repeat, subgroup YP_004013135.1 KEGG: rru:Rru_A3261 hypothetical protein YP_004013136.1 KEGG: app:CAP2UW1_2906 hypothetical protein YP_004013137.1 SMART: ATPase AAA; KEGG: rru:Rru_A3262 hypothetical protein YP_004013138.1 PFAM: protein of unknown function DUF45; KEGG: bid:Bind_2675 hypothetical protein YP_004013139.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: bid:Bind_2674 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase YP_004013140.1 KEGG: ana:all2687 type I restriction-modification enzyme S subunit; manually curated; PFAM: restriction modification system DNA specificity domain YP_004013141.1 KEGG: mbr:MONBRDRAFT_27628 hypothetical protein YP_004013142.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: sli:Slin_2152 filamentation induced by cAMP protein Fic YP_004013143.1 KEGG: bid:Bind_2672 N-6 DNA methylase; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase YP_004013144.1 KEGG: dar:Daro_2221 helicase, C-terminal; manually curated; SMART: DEAD-like helicase YP_004013145.1 KEGG: cdl:CDR20291_1777 hypothetical protein YP_004013146.1 KEGG: ecx:EcHS_A2648 hypothetical protein YP_004013147.1 KEGG: nhl:Nhal_0249 hypothetical protein YP_004013148.1 KEGG: net:Neut_2577 transfer origin protein, TraL YP_004013149.1 KEGG: net:Neut_2576 hypothetical protein YP_004013150.1 PFAM: integrase family protein; KEGG: rpt:Rpal_3817 integrase family protein YP_004013151.1 KEGG: afw:Anae109_1087 hypothetical protein YP_004013152.1 KEGG: aeh:Mlg_2652 diguanylate cyclase YP_004013153.1 KEGG: drm:Dred_0478 anhydrase family 3 protein YP_004013155.1 KEGG: msl:Msil_3572 hypothetical protein YP_004013156.1 KEGG: tne:Tneu_0889 photosystem I assembly BtpA YP_004013157.1 TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: rpe:RPE_1604 CopG/Arc/MetJ family transcriptional regulator YP_004013158.1 PFAM: major facilitator superfamily MFS_1; KEGG: azl:AZL_009150 major facilitator superfamily MFS-1 YP_004013159.1 KEGG: azc:AZC_2312 chaperonin; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004013160.1 PFAM: chaperonin Cpn10; KEGG: pla:Plav_0611 chaperonin Cpn10 YP_004013161.1 KEGG: ana:all0192 serine/threonine kinase YP_004013162.1 KEGG: rpd:RPD_0238 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004013163.1 KEGG: rhi:NGR_c00470 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004013164.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: pla:Plav_3623 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004013165.1 PFAM: methyltransferase; KEGG: mdi:METDI4099 tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase) YP_004013166.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: met:M446_0295 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit YP_004013167.1 KEGG: dme:Dmel_CG31716 CG31716 gene product from transcript CG31716-RC YP_004013168.1 PFAM: alanine racemase domain protein; KEGG: bid:Bind_0226 alanine racemase domain-containing protein YP_004013169.1 KEGG: pla:Plav_1280 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004013170.1 PFAM: protein of unknown function DUF2159, secreted; KEGG: msl:Msil_0337 hypothetical protein YP_004013171.1 KEGG: xau:Xaut_1448 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III subunit delta; PFAM: DNA polymerase III delta YP_004013172.1 KEGG: rpb:RPB_4342 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_004013173.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: pla:Plav_2831 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein YP_004013174.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: met:M446_6672 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein YP_004013175.1 KEGG: eli:ELI_11955 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004013176.1 KEGG: cak:Caul_1496 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004013177.1 KEGG: bid:Bind_0096 hypothetical protein YP_004013178.1 KEGG: pzu:PHZ_c1722 predicted transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004013179.1 KEGG: smd:Smed_1469 aminotransferase class V; PFAM: aminotransferase class V YP_004013180.1 KEGG: xau:Xaut_0084 FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004013181.1 manually curated; KEGG: cpi:Cpin_5650 hypothetical protein YP_004013182.1 KEGG: aga:AgaP_AGAP000724 AGAP000724-PA YP_004013183.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: xau:Xaut_4468 FeS assembly ATPase SufC; SMART: ATPase AAA YP_004013184.1 KEGG: nwi:Nwi_1662 FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_004013185.1 KEGG: xau:Xaut_0087 SufS subfamily cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004013186.1 KEGG: hne:HNE_2613 hypothetical protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59 YP_004013187.1 KEGG: iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004013188.1 PFAM: protein of unknown function DUF583; KEGG: lch:Lcho_3739 outer membrane adhesin like proteiin YP_004013189.1 KEGG: pag:PLES_40461 oxidoreductase YP_004013190.1 PFAM: protein of unknown function DUF214; KEGG: hna:Hneap_0780 protein of unknown function DUF214 YP_004013191.1 KEGG: ret:RHE_CH02075 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004013192.1 KEGG: rlt:Rleg2_1706 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004013193.1 KEGG: bja:bll4354 hypothetical protein YP_004013194.1 KEGG: bja:bll4354 hypothetical protein YP_004013195.1 PFAM: LemA family protein; KEGG: mes:Meso_3226 hypothetical protein YP_004013196.1 PFAM: protein of unknown function DUF477; KEGG: sjp:SJA_C1-10380 hypothetical protein YP_004013197.1 PFAM: protein of unknown function DUF477; KEGG: abo:ABO_1880 hypothetical protein YP_004013198.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mch:Mchl_4204 oxidoreductase FAD/NAD(P)-binding domain protein YP_004013199.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7055 oligopeptide ABC transporter periplasmic substrate-binding protein YP_004013200.1 PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_0248 extracellular solute-binding protein YP_004013201.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: azc:AZC_0133 peptide ABC transporter permease protein YP_004013202.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: pla:Plav_0246 binding-protein-dependent transport systems inner membrane component YP_004013203.1 KEGG: mes:Meso_4080 ABC transporter; PFAM: ABC transporter related; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_004013204.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_0547 peroxisomal bifunctional enzyme YP_004013205.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rce:RC1_0550 oxidoreductase, short chain dehydrogenase YP_004013206.1 PFAM: aminoglycoside phosphotransferase; KEGG: rce:RC1_0551 aminoglycoside phosphotransferase YP_004013207.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rce:RC1_1018 acyl-CoA dehydrogenase YP_004013208.1 PFAM: NUDIX hydrolase; KEGG: ana:all7351 hypothetical protein YP_004013209.1 KEGG: msm:MSMEG_6224 retinal pigment epithelial membrane protein; PFAM: Carotenoid oxygenase YP_004013210.1 PFAM: Uncharacterised conserved protein UCP033924; KEGG: rlg:Rleg_3339 hypothetical protein YP_004013211.1 KEGG: rru:Rru_A2971 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: drug resistance transporter Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004013212.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: azc:AZC_3951 signal recognition particle protein; SMART: ATPase AAA YP_004013213.1 KEGG: azc:AZC_3952 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004013214.1 KEGG: bid:Bind_3504 hypothetical protein YP_004013215.1 KEGG: rpc:RPC_0223 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004013216.1 KEGG: psa:PST_4015 phosphoesterase, TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_004013217.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: rpt:Rpal_0243 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004013218.1 KEGG: ara:Arad_3970 spermidine/putrescine ABC transporter YP_004013219.1 KEGG: bbt:BBta_2189 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004013220.1 KEGG: mes:Meso_3425 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004013221.1 KEGG: scl:sce6484 phosphoprotein phosphatase; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004013222.1 KEGG: mlo:mlr4237 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004013223.1 KEGG: hvo:HVO_2199 hypothetical protein YP_004013224.1 KEGG: mlo:msr6418 nitrogen fixation protein FixS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type YP_004013225.1 KEGG: pla:Plav_1526 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004013226.1 PFAM: FixH family protein; KEGG: pzu:PHZ_c2809 ferredoxin YP_004013227.1 TIGRFAM: cytochrome C oxidase accessory protein CcoG; KEGG: pla:Plav_1528 cytochrome C oxidase cbb3 type accessory protein FixG YP_004013228.1 KEGG: rpd:RPD_0733 cytochrome C oxidase cbb3-type, subunit III; TIGRFAM: cytochrome C oxidase cbb3-type, subunit III; PFAM: cytochrome C class I YP_004013229.1 KEGG: pla:Plav_1530 Cbb3-type cytochrome oxidase component YP_004013230.1 KEGG: rpc:RPC_0014 cytochrome C oxidase cbb3-type, subunit II; TIGRFAM: cytochrome C oxidase cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO YP_004013231.1 TIGRFAM: cytochrome C oxidase cbb3-type, subunit I; KEGG: mmr:Mmar10_1149 cytochrome C oxidase cbb3-type, subunit I; PFAM: cytochrome C oxidase subunit I YP_004013233.1 KEGG: mmw:Mmwyl1_0596 hypothetical protein YP_004013234.1 KEGG: NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein YP_004013235.1 KEGG: bid:Bind_3539 NAD(P) transhydrogenase subunit alpha part 2 transmembrane protein YP_004013236.1 KEGG: NAD(P)(+) transhydrogenase (AB-specific); PFAM: NAD(P) transhydrogenase subunit beta YP_004013237.1 KEGG: pin:Ping_2935 TRAP dicarboxylate transporter DctM subunit YP_004013238.1 KEGG: reu:Reut_A0922 hypothetical protein; PFAM: protein of unknown function DUF323; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004013239.1 manually curated; PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rhi:NGR_c18100 transcriptional regulator protein, Fnr/CRP family; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_004013240.1 PFAM: protein of unknown function DUF2189, transmembrane; KEGG: rce:RC1_1281 integral membrane YP_004013241.1 KEGG: bja:blr7329 multidrug resistance protein; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004013242.1 KEGG: msl:Msil_3559 transporter hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_004013243.1 KEGG: acr:Acry_3474 hypothetical protein YP_004013244.1 PFAM: peptidase U32; KEGG: acr:Acry_3475 peptidase U32 YP_004013245.1 PFAM: peptidase U32; KEGG: acr:Acry_3476 peptidase U32 YP_004013246.1 KEGG: rhodanese; PFAM: Rhodanese domain protein; SMART: rhodanese YP_004013247.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pla:Plav_2990 pyridoxal-5'-phosphate-dependent protein beta subunit YP_004013248.1 KEGG: msl:Msil_1227 hypothetical protein YP_004013249.1 KEGG: outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_004013250.1 SMART: regulatory protein LuxR; KEGG: pzu:PHZ_c1042 transcriptional regulator,LuxR family YP_004013251.1 PFAM: acriflavin resistance protein; KEGG: msl:Msil_2444 acriflavin resistance protein YP_004013252.1 KEGG: msl:Msil_2445 efflux transporter RND family, MFP subunit; TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_004013253.1 KEGG: met:M446_6707 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain-containing protein YP_004013254.1 manually curated; TIGRFAM: UDP-glucose 4-epimerase; KEGG: mei:Msip34_1820 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004013255.1 KEGG: mno:Mnod_1615 hypothetical protein YP_004013256.1 KEGG: azc:AZC_0369 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004013257.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_0439 hypothetical protein YP_004013258.1 KEGG: rpc:RPC_4933 peptidase YP_004013259.1 TIGRFAM: phosphoserine aminotransferase; KEGG: phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004013260.1 KEGG: pla:Plav_2138 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_004013261.1 PFAM: extracellular ligand-binding receptor; KEGG: mno:Mnod_1164 extracellular ligand-binding receptor YP_004013262.1 PFAM: inner-membrane translocator; KEGG: mno:Mnod_1163 inner-membrane translocator YP_004013263.1 KEGG: met:M446_1796 ABC transporter; PFAM: ABC transporter related; inner-membrane translocator; SMART: ATPase AAA YP_004013264.1 KEGG: mno:Mnod_1161 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013265.1 KEGG: osa:4336827 hypothetical protein YP_004013266.1 KEGG: rce:RC1_2258 DNA-binding protein, PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004013267.1 KEGG: mno:Mnod_0039 crotonyl-CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_004013268.1 KEGG: mbr:MONBRDRAFT_34462 hypothetical protein YP_004013269.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: pla:Plav_1613 acyl-CoA dehydrogenase domain-containing protein YP_004013270.1 PFAM: ParB-like nuclease; KEGG: bid:Bind_2187 ParB-like nuclease YP_004013271.1 KEGG: sil:SPO0323 hypothetical protein YP_004013272.1 PFAM: phosphoglycerate mutase; KEGG: mmr:Mmar10_0362 phosphoglycerate mutase YP_004013273.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: mmr:Mmar10_0363 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_004013274.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR YP_004013275.1 PFAM: protein of unknown function DUF1345; KEGG: dar:Daro_0590 hypothetical protein YP_004013276.1 KEGG: azc:AZC_2233 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004013277.1 KEGG: aga:AgaP_AGAP008034 AGAP008034-PA YP_004013278.1 KEGG: rru:Rru_A2693 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004013279.1 KEGG: mes:Meso_1682 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_004013280.1 KEGG: xau:Xaut_1676 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004013281.1 KEGG: rpd:RPD_3204 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004013282.1 KEGG: mlo:mlr0289 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004013283.1 KEGG: nha:Nham_1545 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004013284.1 PFAM: ribosomal protein L4/L1e; KEGG: msl:Msil_0579 50S ribosomal protein L4 YP_004013285.1 PFAM: ribosomal protein L25/L23; KEGG: pla:Plav_2738 ribosomal protein L25/L23 YP_004013286.1 KEGG: azl:AZL_005840 large subunit ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004013287.1 KEGG: azc:AZC_2550 ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004013288.1 KEGG: avi:Avi_1845 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004013289.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; ribosomal protein S3 domain; KH type 2 domain protein; KEGG: xau:Xaut_1685 ribosomal protein S3; SMART: KH domain protein YP_004013290.1 KEGG: mmr:Mmar10_1788 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L10e/L16 YP_004013291.1 KEGG: azc:AZC_2546 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004013292.1 KEGG: oan:Oant_1965 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004013293.1 KEGG: mes:Meso_1668 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004013294.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: azc:AZC_2543 ribosomal protein L24; SMART: KOW domain protein YP_004013295.1 KEGG: azc:AZC_2542 ribosomal protein L5 YP_004013296.1 PFAM: ribosomal protein S14; KEGG: mes:Meso_1665 30S ribosomal protein S14 YP_004013297.1 PFAM: ribosomal protein S8; KEGG: pla:Plav_2750 ribosomal protein S8 YP_004013298.1 KEGG: pla:Plav_2751 ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: ribosomal protein L6, alpha-beta domain YP_004013299.1 KEGG: bbt:BBta_5054 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004013300.1 KEGG: pla:Plav_2753 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein YP_004013301.1 KEGG: atu:Atu8065 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004013302.1 TIGRFAM: ribosomal protein L15; KEGG: rpd:RPD_3165 50S ribosomal protein L15 YP_004013303.1 KEGG: azc:AZC_2534 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004013304.1 KEGG: mag:amb3110 adenylate kinase-like kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_004013305.1 KEGG: xau:Xaut_4776 ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004013306.1 KEGG: azc:AZC_2531 ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004013307.1 TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: met:M446_0329 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004013308.1 KEGG: rru:Rru_A2663 50S ribosomal protein L17P; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004013309.1 KEGG: msl:Msil_1725 fumarate reductase flavoprotein subunit; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004013310.1 KEGG: msl:Msil_1724 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004013311.1 PFAM: fumarate reductase subunit C; KEGG: msl:Msil_1723 fumarate reductase, subunit C YP_004013312.1 PFAM: fumarate reductase D subunit; KEGG: msl:Msil_1722 fumarate reductase subunit D YP_004013313.1 KEGG: hba:Hbal_2923 hypothetical protein YP_004013314.1 PFAM: ATPase-like, ParA/MinD; KEGG: rpt:Rpal_2187 multidrug-resistance related protein YP_004013315.1 KEGG: rpt:Rpal_4013 protein of unknown function DUF1321 YP_004013316.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3215 ErfK/YbiS/YcfS/YnhG family protein YP_004013317.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: bbt:BBta_2972 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_004013318.1 KEGG: oca:OCAR_6668 hopanoid biosynthesis associated radical SAM protein HpnH; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: radical SAM protein YP_004013319.1 KEGG: cti:RALTA_B1984 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004013320.1 TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; KEGG: bph:Bphy_4137 squalene-hopene cyclase; PFAM: prenyltransferase/squalene oxidase YP_004013321.1 KEGG: rpc:RPC_1719 amine oxidase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase YP_004013322.1 TIGRFAM: squalene synthase HpnD; KEGG: msl:Msil_3241 squalene synthase HpnD; PFAM: Squalene/phytoene synthase YP_004013323.1 KEGG: oca:OCAR_6674 squalene synthase HpnC; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase YP_004013324.1 KEGG: cyn:Cyan7425_4598 hopene-associated glycosyltransferase HpnB; TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2 YP_004013325.1 KEGG: pla:Plav_0223 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004013326.1 KEGG: mes:Meso_1266 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004013327.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: RecA protein; SMART: ATPase AAA YP_004013328.1 KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_004013329.1 KEGG: pla:Plav_0699 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein YP_004013330.1 PFAM: DSBA oxidoreductase; KEGG: mes:Meso_0767 DsbA oxidoreductase YP_004013331.1 PFAM: DSBA oxidoreductase; KEGG: DsbA oxidoreductase YP_004013332.1 PFAM: protein of unknown function DUF721; KEGG: rce:RC1_0509 hypothetical protein YP_004013333.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: azl:AZL_c00560 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_004013334.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: met:M446_6629 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004013335.1 KEGG: rce:RC1_0637 thiol:disulfide interchange protein DsbD, PFAM: cytochrome C biogenesis protein transmembrane region YP_004013336.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: bra:BRADO1947 glucan biosynthesis protein G YP_004013337.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: apt:APA01_00470 glucan biosynthesis periplasmic protein MdoG YP_004013338.1 PFAM: glycosyl transferase family 2; KEGG: mno:Mnod_1823 glycosyl transferase family 2 YP_004013339.1 PFAM: OmpA/MotB domain protein; KEGG: mno:Mnod_1486 OmpA/MotB domain protein YP_004013340.1 KEGG: lmy:LM5923_0618 hypothetical protein YP_004013341.1 PFAM: SCP-like extracellular; KEGG: eba:ebA3441 hypothetical protein YP_004013342.1 KEGG: bid:Bind_3592 hypothetical protein YP_004013343.1 PFAM: isochorismatase hydrolase; KEGG: sli:Slin_0010 isochorismatase hydrolase YP_004013344.1 PFAM: adenylate cyclase; KEGG: hha:Hhal_1263 adenylate cyclase YP_004013345.1 PFAM: SpoVR family protein; KEGG: hba:Hbal_1361 SpoVR family protein YP_004013346.1 PFAM: protein of unknown function DUF444; KEGG: hba:Hbal_1360 protein of unknown function DUF444 YP_004013347.1 KEGG: hba:Hbal_1359 serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004013348.1 KEGG: mno:Mnod_1810 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004013349.1 PFAM: protein of unknown function DUF2076; KEGG: xau:Xaut_1890 periplasmic ligand-binding sensor protein YP_004013350.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: transcriptional coactivator/pterin dehydratase YP_004013351.1 KEGG: met:M446_5257 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004013352.1 KEGG: pla:Plav_1584 prephenate dehydrogenase; PFAM: prephenate dehydrogenase YP_004013353.1 PFAM: cation transport protein ChaC; KEGG: xau:Xaut_0017 ChaC family protein YP_004013354.1 PFAM: regulatory protein TetR; KEGG: mch:Mchl_4062 TetR family transcriptional regulator YP_004013355.1 KEGG: xau:Xaut_2060 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004013356.1 PFAM: protein of unknown function DUF163; KEGG: btr:Btr_0177 rRNA large subunit methyltransferase YP_004013357.1 PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_2112 glycosyl transferase, group 1 YP_004013358.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0489 ferric uptake regulator family protein YP_004013359.1 KEGG: pmy:Pmen_4497 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013360.1 PFAM: ABC transporter; KEGG: tgr:Tgr7_2749 ABC transporter YP_004013361.1 KEGG: bja:blr0936 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004013362.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004013363.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; manually curated; PFAM: integrase YP_004013364.1 KEGG: rpi:Rpic_1925 hypothetical protein YP_004013365.1 KEGG: azc:AZC_3627 ribonuclease E and G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/ribonuclease E/G YP_004013366.1 KEGG: ttu:TERTU_0058 ATPase AAA containing von Willebrand factor A YP_004013367.1 PFAM: cell wall hydrolase/autolysin; KEGG: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin YP_004013368.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: rpd:RPD_2444 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004013369.1 KEGG: bpm:BURPS1710b_3602 hypothetical protein YP_004013370.1 KEGG: rpe:RPE_0207 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004013371.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: pyrF; orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004013372.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: rfr:Rfer_2817 acyl-CoA dehydrogenase-like YP_004013373.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_2816 enoyl-CoA hydratase/isomerase YP_004013374.1 PFAM: peptidase M24; creatinase; KEGG: mno:Mnod_4443 peptidase M24 YP_004013375.1 PFAM: ribosomal L11 methyltransferase; KEGG: met:M446_1746 ribosomal L11 methyltransferase YP_004013377.1 KEGG: cre:CHLREDRAFT_149502 hypothetical protein YP_004013378.1 KEGG: rpa:RPA2850 hypothetical protein; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_004013379.1 KEGG: xau:Xaut_4407 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_004013380.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: smd:Smed_1165 sec-independent translocase YP_004013381.1 KEGG: azc:AZC_1738 sec-independent periplasmic protein translocase; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_004013382.1 PFAM: histidine triad (HIT) protein; KEGG: met:M446_4665 histidine triad (HIT) protein YP_004013383.1 PFAM: protein of unknown function DUF937; KEGG: bja:bll5166 hypothetical protein YP_004013384.1 PFAM: GCN5-related N-acetyltransferase; KEGG: npu:Npun_F0556 GCN5-related N-acetyltransferase YP_004013385.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase; helicase; KEGG: bbt:BBta_0402 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_004013386.1 KEGG: mes:Meso_3306 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_004013387.1 KEGG: mmr:Mmar10_1186 hypothetical protein YP_004013388.1 KEGG: gau:GAU_3905 AsnC family transcriptional regulator; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004013389.1 PFAM: amidinotransferase; KEGG: gbe:GbCGDNIH1_1191 amidinotransferase family protein YP_004013390.1 KEGG: gbe:GbCGDNIH1_1948 ornithine--oxo-acid transaminase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III YP_004013391.1 KEGG: mea:Mex_1p4039 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase YP_004013392.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ccs:CCNA_01198 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004013393.1 KEGG: swi:Swit_4019 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004013394.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: las:CLIBASIA_04090 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004013395.1 KEGG: stp:Strop_1291 chromosome segregation protein SMC YP_004013396.1 KEGG: mlo:msl0146 hypothetical protein YP_004013397.1 PFAM: Uncharacterised protein family UPF0079, ATPase; aminoglycoside phosphotransferase; KEGG: msl:Msil_0666 protein of unknown function UPF0079 YP_004013398.1 PFAM: LamB/YcsF family protein; KEGG: mex:Mext_4561 LamB/YcsF family protein YP_004013399.1 PFAM: aminotransferase class-III; KEGG: mno:Mnod_3410 aminotransferase class-III YP_004013400.1 PFAM: methyltransferase small; KEGG: rpe:RPE_0637 methyltransferase small YP_004013401.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dfe:Dfer_1916 CMP/dCMP deaminase zinc-binding YP_004013402.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpe:RPE_1939 protease Do; SMART: PDZ/DHR/GLGF domain protein YP_004013403.1 KEGG: oca:OCAR_6571 transcriptional activator protein CopR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004013404.1 KEGG: msl:Msil_0190 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein YP_004013405.1 KEGG: pla:Plav_0946 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_004013406.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: azc:AZC_3629 glucose-6-phosphate dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_004013407.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: 6-phosphogluconolactonase YP_004013408.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: azc:AZC_2424 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004013409.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: xau:Xaut_1019 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_004013410.1 manually curated; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); KEGG: tmz:Tmz1t_3247 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004013411.1 KEGG: abu:Abu_0682 O-antigen translocase YP_004013412.1 TIGRFAM: methyltransferase FkbM family; KEGG: met:M446_1079 FkbM family methyltransferase YP_004013413.1 PFAM: glycosyl transferase group 1; KEGG: mrb:Mrub_0354 glycosyl transferase group 1 YP_004013414.1 KEGG: rce:RC1_4022 hypothetical protein YP_004013415.1 KEGG: sli:Slin_4075 hypothetical protein YP_004013416.1 PFAM: glycosyl transferase group 1; KEGG: acp:A2cp1_3254 glycosyl transferase group 1 YP_004013417.1 KEGG: rpe:RPE_2245 hypothetical protein YP_004013418.1 KEGG: mpo:Mpop_3656 hypothetical protein YP_004013419.1 KEGG: mno:Mnod_1015 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004013420.1 PFAM: protein of unknown function DUF805; KEGG: rpt:Rpal_0629 protein of unknown function DUF805 YP_004013421.1 KEGG: ccs:CCNA_03724 hypothetical protein YP_004013422.1 KEGG: rpc:RPC_0809 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004013423.1 KEGG: bpm:BURPS1710b_0631 hypothetical protein YP_004013424.1 KEGG: bte:BTH_I0391 hypothetical protein YP_004013425.1 PFAM: integrase family protein; KEGG: rsp:RSP_2749 P4 family integrase YP_004013426.1 PFAM: prophage CP4-57 regulator; KEGG: nmu:Nmul_A2182 phage transcriptional regulator, AlpA YP_004013427.1 KEGG: ara:Arad_2290 hypothetical protein YP_004013428.1 KEGG: gga:424588 hypothetical LOC424588 YP_004013429.1 KEGG: bhy:BHWA1_01226 hypothetical protein YP_004013430.1 KEGG: xau:Xaut_2116 hypothetical protein YP_004013432.1 KEGG: sit:TM1040_0644 CzcN domain-containing protein YP_004013433.1 KEGG: pla:Plav_0503 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_004013434.1 PFAM: Na+/solute symporter; KEGG: tgr:Tgr7_1022 SSF family Na(+)/solute symporter YP_004013435.1 TIGRFAM: solute symporter protein; KEGG: bgl:bglu_1g25350 membrane protein-like protein YP_004013436.1 KEGG: bja:blr1194 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_004013437.1 PFAM: metallophosphoesterase; KEGG: mno:Mnod_1345 metallophosphoesterase YP_004013438.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004013439.1 KEGG: met:M446_1478 integrase family protein YP_004013440.1 PFAM: integrase; integrase family protein; KEGG: rlt:Rleg2_4247 integrase family protein YP_004013441.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: azl:AZL_013840 DNA-invertase YP_004013442.1 PFAM: EcoEI R domain protein; type III restriction protein res subunit; protein of unknown function DUF450; KEGG: hsdR3; type I restriction-modification system RcaSBIV subunit R; SMART: DEAD-like helicase YP_004013443.1 PFAM: restriction modification system DNA specificity domain; KEGG: ava:Ava_3267 restriction modification system DNA specificity subunit YP_004013444.1 PFAM: N-6 DNA methylase; KEGG: hsdM3; type I restriction-modification system RcaSBIV subunit M YP_004013445.1 KEGG: met:M446_0814 nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_004013446.1 KEGG: ccs:CCNA_00318 hypothetical protein YP_004013447.1 KEGG: rpb:RPB_0449 AsnC family transcriptional regulator; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004013448.1 KEGG: rpt:Rpal_0375 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004013449.1 PFAM: IS66 Orf2 family protein; KEGG: xau:Xaut_5014 IS66 Orf2 family protein YP_004013450.1 PFAM: transposase IS3/IS911 family protein; KEGG: rpe:RPE_3518 transposase IS3/IS911 family protein YP_004013451.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpt:Rpal_3616 plasmid maintenance system antidote protein, XRE family; SMART: helix-turn-helix domain protein YP_004013452.1 PFAM: plasmid maintenance system killer; KEGG: mch:Mchl_1124 plasmid maintenance system killer YP_004013453.1 KEGG: cyn:Cyan7425_3107 hypothetical protein YP_004013454.1 KEGG: nca:Noca_4654 NUDIX hydrolase YP_004013456.1 KEGG: pde:Pden_2062 DNA mismatch endonuclease vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_004013457.1 KEGG: mno:Mnod_0921 hypothetical protein YP_004013458.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; manually curated; PFAM: integrase YP_004013459.1 KEGG: bmr:BMI_I525 ISBm1, transposase orfA YP_004013460.1 KEGG: dba:Dbac_1657 hypothetical protein YP_004013461.1 KEGG: dba:Dbac_1658 hypothetical protein YP_004013462.1 KEGG: nwi:Nwi_2922 ISBm1, transposase orfA YP_004013463.1 KEGG: mno:Mnod_7359 ceramide glucosyltransferase YP_004013464.1 KEGG: nha:Nham_4025 hypothetical protein YP_004013465.1 PFAM: restriction endonuclease; KEGG: azl:AZL_027010 restriction system protein YP_004013466.1 PFAM: integrase; KEGG: met:M446_5589 transposase YP_004013467.1 KEGG: gla:GL50803_17320 Coiled-coil protein YP_004013468.1 KEGG: fgr:FG01483.1 hypothetical protein YP_004013469.1 KEGG: bpt:Bpet4294 reverse transcriptase YP_004013470.1 KEGG: rce:RC1_2259 dihydrolipoamide dehydrogenase YP_004013471.1 KEGG: transcription regulator protein YP_004013472.1 KEGG: bja:bll2159 transposase YP_004013473.1 KEGG: rsq:Rsph17025_3725 hypothetical protein; manually curated; PFAM: IS66 Orf2 family protein YP_004013474.1 PFAM: transposase IS3/IS911 family protein; KEGG: azl:AZL_f01430 transposase YP_004013475.1 KEGG: rpc:RPC_2708 outer membrane autotransporter barrel YP_004013476.1 KEGG: nar:Saro_0766 hypothetical protein YP_004013477.1 KEGG: nar:Saro_0767 hypothetical protein YP_004013478.1 KEGG: nar:Saro_0765 hypothetical protein YP_004013479.1 KEGG: nar:Saro_0764 hypothetical protein YP_004013480.1 KEGG: rce:RC1_0162 hypothetical protein YP_004013481.1 KEGG: osa:4345121 hypothetical protein YP_004013482.1 KEGG: bmr:BMI_II175 transcriptional regulator, LysR family; manually curated; PFAM: regulatory protein LysR; LysR substrate-binding YP_004013483.1 KEGG: bja:bll2244 cAMP-regulatory protein YP_004013484.1 TIGRFAM: excisionase; KEGG: stp:Strop_0059 DNA binding domain-containing protein YP_004013485.1 PFAM: integrase family protein; KEGG: dsh:Dshi_0398 integrase family protein YP_004013486.1 PFAM: integrase family protein; KEGG: dsh:Dshi_0397 integrase family protein YP_004013487.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: pla:Plav_0105 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase YP_004013488.1 PFAM: carboxymuconolactone decarboxylase; KEGG: rru:Rru_A1720 carboxymuconolactone decarboxylase YP_004013489.1 PFAM: protein of unknown function DUF1465; KEGG: mch:Mchl_2633 protein of unknown function DUF1465 YP_004013490.1 KEGG: pla:Plav_2092 quinone oxidoreductase PIG3; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein YP_004013491.1 PFAM: protein of unknown function DUF150; KEGG: xau:Xaut_0296 hypothetical protein YP_004013492.1 TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; K Homology, type 1, subgroup; KEGG: bid:Bind_1049 NusA antitermination factor; SMART: KH domain protein YP_004013493.1 PFAM: protein of unknown function DUF448; KEGG: bid:Bind_1048 hypothetical protein YP_004013494.1 KEGG: met:M446_2611 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein YP_004013495.1 PFAM: protein of unknown function DUF2093; KEGG: mes:Meso_0440 hypothetical protein YP_004013496.1 TIGRFAM: exodeoxyribonuclease VII large subunit; KEGG: mlo:mll6896 exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004013497.1 KEGG: xau:Xaut_2468 porin YP_004013499.1 TIGRFAM: argininosuccinate synthase; KEGG: mno:Mnod_7386 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004013500.1 KEGG: bov:BOV_1106 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: citrate synthase YP_004013501.1 KEGG: bja:blr4562 hypothetical protein YP_004013502.1 KEGG: pla:Plav_2986 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004013503.1 KEGG: pla:Plav_2985 polar amino acid ABC transporter inner membrane protein; TIGRFAM: polar amino acid ABC transporter inner membrane protein; PFAM: binding-protein-dependent transporters inner membrane component YP_004013504.1 KEGG: rpa:RPA2560 ABC transporter periplasmic amino acid binding protein AapJ-1; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004013505.1 KEGG: cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004013506.1 KEGG: ara:Arad_2163 single-stranded-DNA-specific exonuclease protein; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004013507.1 TIGRFAM: decaheme c-type cytochrome, DmsE family; cytochrome C family protein; KEGG: rpe:RPE_0831 cytochrome C family protein YP_004013508.1 TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; KEGG: rpe:RPE_0832 outer membrane protein precursor YP_004013509.1 KEGG: rpe:RPE_0833 hypothetical protein YP_004013510.1 TIGRFAM: cytochrome C biogenesis protein CcmI; KEGG: rpc:RPC_1834 tetratricopeptide TPR_2 YP_004013511.1 PFAM: CcmE/CycJ protein; KEGG: met:M446_4432 CcmE/CycJ protein YP_004013512.1 KEGG: rpd:RPD_2003 cytochrome C biogenesis protein CcmF; TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein YP_004013513.1 PFAM: cytochrome C biogenesis protein; KEGG: mpo:Mpop_1400 cytochrome C biogenesis protein YP_004013514.1 PFAM: protein of unknown function DUF159; KEGG: ana:all3194 hypothetical protein YP_004013515.1 PFAM: glycosyl transferase group 1; KEGG: pzu:PHZ_c0613 glycosyltransferase YP_004013516.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: mno:Mnod_7390 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004013517.1 KEGG: str:Sterm_3790 hypothetical protein YP_004013518.1 PFAM: protein of unknown function DUF2191; KEGG: protein of unknown function DUF2191 YP_004013519.1 PFAM: PilT protein domain protein; KEGG: ana:all2196 hypothetical protein YP_004013520.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004013521.1 KEGG: oca:OCAR_5972 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004013522.1 KEGG: pla:Plav_3179 ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_004013523.1 KEGG: ara:Arad_3183 hypothetical protein YP_004013524.1 PFAM: aminotransferase class I and II; KEGG: rpt:Rpal_2782 aminotransferase YP_004013525.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: afw:Anae109_1428 aromatic-L-amino-acid decarboxylase YP_004013526.1 KEGG: aeh:Mlg_1765 hypothetical protein YP_004013527.1 PFAM: thioesterase; KEGG: mch:Mchl_2713 thioesterase YP_004013528.1 KEGG: mlo:mll8458 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004013529.1 PFAM: ribosomal protein S9; KEGG: oan:Oant_2496 30S ribosomal protein S9 YP_004013530.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: rce:RC1_1311 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region YP_004013531.1 KEGG: seu:SEQ_2190 cell surface-anchored protein YP_004013532.1 PFAM: Extensin family protein; KEGG: oan:Oant_2397 extensin family protein YP_004013533.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: met:M446_1761 hypothetical protein YP_004013534.1 PFAM: FAD linked oxidase; KEGG: mrd:Mrad2831_4651 FAD linked oxidase domain-containing protein YP_004013535.1 PFAM: FAD linked oxidase; KEGG: mno:Mnod_4582 FAD linked oxidase YP_004013536.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmi:BMEA_B0178 hypothetical protein YP_004013537.1 PFAM: extracellular solute-binding protein, family 7; KEGG: mag:amb0422 TRAP-type C4-dicarboxylate transporter, periplasmic component YP_004013538.1 KEGG: mag:amb0423 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; tripartite ATP-independent periplasmic transporter DctQ component YP_004013539.1 KEGG: rpt:Rpal_0925 porin YP_004013540.1 KEGG: mno:Mnod_3321 porin YP_004013541.1 TIGRFAM: signal peptidase I; KEGG: xau:Xaut_3880 signal peptidase I; PFAM: peptidase S24/S26A/S26B, conserved region YP_004013542.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: mrd:Mrad2831_3455 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004013543.1 KEGG: azc:AZC_2005 transcriptional regulator; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004013544.1 KEGG: mdi:METDI1533 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: recombination protein O RecO YP_004013545.1 PFAM: SNARE associated Golgi protein; KEGG: bpt:Bpet1622 hypothetical protein YP_004013546.1 PFAM: hypothetical protein; KEGG: tet:TTHERM_00420670 TPR Domain containing protein YP_004013547.1 PFAM: carbohydrate-selective porin OprB; KEGG: mno:Mnod_4737 carbohydrate-selective porin OprB YP_004013548.1 KEGG: mes:Meso_0097 2'-deoxycytidine 5'-triphosphate deaminase YP_004013549.1 KEGG: rpe:RPE_2289 periplasmic sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004013550.1 KEGG: amc:MADE_03205 histidine kinase response regulator hybrid protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein YP_004013551.1 KEGG: mgm:Mmc1_1537 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver YP_004013552.1 PFAM: redoxin; KEGG: mno:Mnod_6935 redoxin domain protein YP_004013553.1 PFAM: peptidase M23; KEGG: nha:Nham_0524 peptidase M23B YP_004013554.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: rpb:RPB_0258 carboxyl-terminal protease; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_004013555.1 KEGG: sde:Sde_2716 protein translocase subunit SecG YP_004013556.1 PFAM: NUDIX hydrolase; KEGG: bmr:BMI_I1852 dinucleoside polyphosphate hydrolase YP_004013557.1 KEGG: atu:Atu2625 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_004013558.1 KEGG: rpc:RPC_0176 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_004013559.1 KEGG: rpe:RPE_0281 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma YP_004013560.1 TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; KEGG: ATP synthase F1 subunit beta; SMART: ATPase AAA YP_004013561.1 KEGG: pla:Plav_1466 ATP synthase F1 epsilon subunit; TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/subunit epsilon-like YP_004013562.1 KEGG: nwi:Nwi_2917 integrase, catalytic region; manually curated; PFAM: integrase YP_004013563.1 KEGG: bac:BamMC406_2859 TonB-dependent siderophore receptor YP_004013564.1 KEGG: aga:AgaP_AGAP005567 AGAP005567-PA YP_004013566.1 KEGG: xau:Xaut_0539 hypothetical protein YP_004013567.1 KEGG: gdi:GDI_1117 hypothetical protein YP_004013568.1 KEGG: bja:bll5007 hypothetical protein YP_004013569.1 KEGG: rpc:RPC_0725 transposase YP_004013570.1 KEGG: cak:Caul_4135 hypothetical protein YP_004013571.1 KEGG: hypothetical protein YP_004013572.1 KEGG: hsm:HSM_0869 hypothetical protein YP_004013573.1 KEGG: rpt:Rpal_3409 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004013574.1 KEGG: mno:Mnod_0197 osmosensitive K+ channel signal transduction histidine kinase; PFAM: osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004013575.1 TIGRFAM: potassium ABC transporter ATPase; KEGG: mrd:Mrad2831_0206 potassium-transporting ATPase C; PFAM: K transporting ATPase KdpC subunit YP_004013576.1 KEGG: xau:Xaut_3238 K+-transporting ATPase, B subunit; TIGRFAM: K+-transporting ATPase subunit beta; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; haloacid dehalogenase YP_004013577.1 TIGRFAM: potassium-transporting ATPase subunit alpha; KEGG: mlo:mll3133 potassium-transporting ATPase A; PFAM: K transporting ATPase subunit alpha YP_004013578.1 KEGG: rpc:RPC_2739 alpha/beta hydrolase fold YP_004013579.1 KEGG: rsq:Rsph17025_3978 hypothetical protein YP_004013580.1 PFAM: protein of unknown function DUF502; KEGG: mpt:Mpe_A1265 hypothetical protein YP_004013581.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rlt:Rleg2_4100 hypothetical protein YP_004013582.1 SMART: ATPase AAA; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: rce:RC1_1796 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA YP_004013583.1 KEGG: azl:AZL_009870 cell cycle protein; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein YP_004013584.1 KEGG: tol-pal system protein YbgF; TIGRFAM: tol-pal system protein YbgF; SMART: Tetratricopeptide repeat YP_004013585.1 KEGG: mes:Meso_3170 OmpA/MotB; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_004013587.1 KEGG: azc:AZC_0524 twin-arginine translocation pathway signal precursor; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein YP_004013588.1 KEGG: TolA YP_004013589.1 KEGG: mes:Meso_3173 biopolymer transporter ExbD/TolR; TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR YP_004013590.1 KEGG: azc:AZC_0521 TolQ protein precursor; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_004013591.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_3087 AMP-dependent synthetase and ligase YP_004013592.1 PFAM: extracellular solute-binding protein family 5; KEGG: pla:Plav_3093 extracellular solute-binding protein YP_004013593.1 PFAM: invasion associated locus B family protein; KEGG: azc:AZC_1224 hypothetical protein YP_004013594.1 PFAM: porin; KEGG: porin YP_004013595.1 KEGG: sme:SMc04271 hypothetical protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_004013596.1 KEGG: bra:BRADO7104 hypothetical protein YP_004013597.1 KEGG: ptr:749548 similar to proteophosphoglycan ppg4 YP_004013598.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV subunit beta; KEGG: azc:AZC_2513 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004013599.1 KEGG: xau:Xaut_3704 hypothetical protein YP_004013600.1 KEGG: swi:Swit_4443 hypothetical protein YP_004013601.1 KEGG: shm:Shewmr7_3847 signal recognition particle-docking protein FtsY YP_004013602.1 manually curated; KEGG: swi:Swit_4452 hypothetical protein YP_004013603.1 KEGG: bta:539323 dachsous 2 (Drosophila) YP_004013604.1 KEGG: rsq:Rsph17025_3567 hypothetical protein YP_004013605.1 KEGG: mmr:Mmar10_0798 hypothetical protein YP_004013606.1 KEGG: gdj:Gdia_2453 hypothetical protein YP_004013607.1 KEGG: rsq:Rsph17025_3714 hypothetical protein YP_004013608.1 KEGG: afw:Anae109_3031 GCN5-related N-acetyltransferase YP_004013609.1 KEGG: gdj:Gdia_2448 hypothetical protein YP_004013610.1 KEGG: rpe:RPE_2942 hypothetical protein YP_004013611.1 KEGG: llo:LLO_1723 cytochrome b561 YP_004013612.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rpd:RPD_1475 enoyl-CoA hydratase YP_004013613.1 KEGG: hypothetical protein YP_004013614.1 KEGG: mno:Mnod_5260 glucokinase; PFAM: glucokinase YP_004013615.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: mes:Meso_1527 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20 YP_004013616.1 PFAM: glycoside hydrolase 15-related; KEGG: mes:Meso_1528 glycoside hydrolase 15-related YP_004013617.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: mes:Meso_1529 HAD family hydrolase; PFAM: trehalose-phosphatase YP_004013618.1 KEGG: dwi:Dwil_GK19866 GK19866 gene product from transcript GK19866-RA YP_004013619.1 KEGG: ara:Arad_9407 hypothetical protein YP_004013621.1 PFAM: protein of unknown function DUF847; peptidoglycan binding domain; peptidoglycan-binding protein; KEGG: xau:Xaut_3175 hypothetical protein YP_004013622.1 KEGG: nri:NRI_0450 cytosol aminopeptidase YP_004013623.1 KEGG: ncr:NCU08179 hypothetical protein YP_004013624.1 KEGG: rpc:RPC_2397 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004013625.1 KEGG: sme:SMc01233 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004013626.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase subunit alpha; KEGG: oca:OCAR_6233 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004013627.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase YP_004013628.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: met:M446_4460 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_004013629.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: nwi:Nwi_1797 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_004013630.1 KEGG: pzu:PHZ_c1403 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004013631.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: smd:Smed_1268 queuine tRNA-ribosyltransferase; PFAM: queuine/other tRNA-ribosyltransferase YP_004013632.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_4595 hypothetical protein YP_004013633.1 KEGG: rpe:RPE_1322 3-beta hydroxysteroid dehydrogenase/isomerase YP_004013634.1 PFAM: protein of unknown function DUF1428; KEGG: sdy:SDY_0392 hypothetical protein YP_004013635.1 KEGG: nha:Nham_3666 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004013636.1 PFAM: peptidase M23; KEGG: sit:TM1040_3387 hypothetical protein YP_004013637.1 KEGG: met:M446_0108 hypothetical protein YP_004013638.1 KEGG: ava:Ava_4492 hypotheticalprotein; PFAM: hypothetical protein; SMART: Tetratricopeptide repeat YP_004013639.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mno:Mnod_1716 4'-phosphopantetheinyl transferase YP_004013640.1 KEGG: npu:Npun_F3228 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; transferase hexapeptide repeat containing protein YP_004013641.1 KEGG: rpe:RPE_0332 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_004013642.1 KEGG: rpe:RPE_3879 hypothetical protein YP_004013643.1 KEGG: rpe:RPE_3880 hypothetical protein; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: nitrogenase iron-iron accessory protein AnfO YP_004013644.1 KEGG: rpe:RPE_3881 nitrogenase; TIGRFAM: Fe-only nitrogenase subunit beta; PFAM: oxidoreductase/nitrogenase component 1 YP_004013645.1 TIGRFAM: Fe-only nitrogenase, subunit delta; KEGG: rsk:RSKD131_3890 nitrogenase iron-iron protein delta chain; PFAM: Vanadium/alternative nitrogenase subunit delta YP_004013646.1 TIGRFAM: nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; KEGG: cts:Ctha_1831 nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004013647.1 TIGRFAM: nitrogenase iron protein; KEGG: rpc:RPC_4684 nitrogenase reductase; PFAM: NifH/frxC-family protein YP_004013648.1 KEGG: rpe:RPE_3885 NifA subfamily transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase YP_004013649.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: azc:AZC_0957 ErfK/YbiS/YcfS/YnhG precursor YP_004013650.1 KEGG: cpi:Cpin_5233 peptidase M1 membrane alanine aminopeptidase YP_004013651.1 KEGG: oan:Oant_0492 HSP70 family protein YP_004013652.1 KEGG: bgl:bglu_2g13870 transcriptional regulator, GntR family protein; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004013653.1 KEGG: pfl:PFL_4914 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transporter YP_004013654.1 KEGG: pla:Plav_2189 phosphatidylethanolamine N-methyltransferase; PFAM: methyltransferase type 11 YP_004013655.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: rpb:RPB_4116 tRNA-specific 2-thiouridylase MnmA YP_004013656.1 KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Na+/solute symporter; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_004013657.1 PFAM: glycosyl transferase group 1; KEGG: pca:Pcar_1522 glycosyltransferase YP_004013658.1 PFAM: Fe-S metabolism associated SufE; KEGG: bbt:BBta_5927 hypothetical protein YP_004013659.1 KEGG: rpd:RPD_0940 hypothetical protein YP_004013660.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: rec:RHECIAT_CH0000160 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_004013661.1 PFAM: OmpA/MotB domain protein; KEGG: azc:AZC_0496 flagellar motor protein YP_004013662.1 KEGG: oan:Oant_1204 hypothetical protein YP_004013663.1 PFAM: inositol monophosphatase; KEGG: mmr:Mmar10_2588 inositol-phosphate phosphatase YP_004013664.1 KEGG: oan:Oant_1206 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein YP_004013665.1 PFAM: AFG1-family ATPase; KEGG: nha:Nham_0546 AFG1-like ATPase YP_004013666.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mbr:MONBRDRAFT_34462 hypothetical protein YP_004013667.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: xau:Xaut_0022 cell division ATP-binding protein FtsE; SMART: ATPase AAA YP_004013668.1 KEGG: bja:blr1391 cell division protein YP_004013669.1 PFAM: protein of unknown function DUF218; KEGG: rpb:RPB_0836 hypothetical protein YP_004013670.1 KEGG: xau:Xaut_0019 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004013671.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rru:Rru_A0098 cystathionine gamma-synthase YP_004013672.1 KEGG: mgm:Mmc1_3429 hypothetical protein YP_004013673.1 KEGG: uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_004013674.1 PFAM: CsbD family protein; KEGG: noc:Noc_0274 CsbD-like protein YP_004013675.1 PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein YP_004013676.1 KEGG: azc:AZC_4021 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004013677.1 PFAM: MGS domain protein; KEGG: hba:Hbal_0036 MGS domain protein YP_004013678.1 KEGG: ade:Adeh_0926 hypothetical protein YP_004013679.1 KEGG: bid:Bind_0732 hypothetical protein YP_004013680.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: azl:AZL_015900 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_004013681.1 TIGRFAM: homoserine kinase; KEGG: rce:RC1_3648 homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_004013682.1 KEGG: rpe:RPE_4128 ribonuclease H; PFAM: ribonuclease H YP_004013683.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004013684.1 KEGG: mlo:mll0896 septum site-determining protein YP_004013685.1 KEGG: bja:blr3501 hypothetical protein YP_004013686.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: mno:Mnod_2567 type II and III secretion system protein YP_004013687.1 KEGG: bxe:Bxe_C0246 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004013688.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eba:ebA5126 short-chain dehydrogenase YP_004013689.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: tmz:Tmz1t_0732 acetyl-CoA acetyltransferase; PFAM: thiolase-like YP_004013690.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: azo:azo0394 acyl-CoA dehydrogenase YP_004013691.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: azo:azo3544 4-hydroxybutyrate coenzyme A transferase YP_004013692.1 KEGG: rsp:RSP_2962 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase YP_004013693.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sil:SPO2211 acyl-CoA dehydrogenase YP_004013694.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: dsh:Dshi_1751 enoyl-CoA hydratase/isomerase family protein YP_004013695.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: rle:pRL110406 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_004013696.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rhi:NGR_c37150 predicted enoyl-CoA hydratase/isomerase family protein YP_004013697.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: aha:AHA_3494 group II decarboxylase YP_004013698.1 PFAM: protein of unknown function DUF2155; KEGG: mch:Mchl_1229 hypothetical protein YP_004013699.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: azc:AZC_1209 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_004013700.1 KEGG: azc:AZC_3075 acetyl-CoA carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004013701.1 KEGG: rpc:RPC_2868 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004013702.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: pla:Plav_3290 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; CheW domain protein YP_004013703.1 PFAM: DSBA oxidoreductase; KEGG: mpo:Mpop_3941 DsbA oxidoreductase YP_004013704.1 PFAM: peptidase M48 Ste24p; KEGG: bra:BRADO3508 hypothetical protein YP_004013705.1 PFAM: aminotransferase class I and II; KEGG: mea:Mex_1p3915 aspartate aminotransferase YP_004013706.1 KEGG: rpc:RPC_4313 hypothetical protein YP_004013707.1 KEGG: avi:Avi_2104 hypothetical protein YP_004013708.1 PFAM: aldehyde dehydrogenase; KEGG: oca:OCAR_6738 succinate-semialdehyde dehydrogenase YP_004013709.1 KEGG: oca:OCAR_6737 succinyl-CoA synthetase beta chain (SCS-alpha); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_004013710.1 PFAM: CoA-binding protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rpe:RPE_3202 succinyl-CoA synthetase, alpha subunit YP_004013711.1 TIGRFAM: excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: rpc:RPC_4137 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase YP_004013712.1 TIGRFAM: modD protein; KEGG: met:M446_3533 ModD protein; PFAM: Quinolinate phosphoribosyl transferase YP_004013713.1 KEGG: msl:Msil_3634 hypothetical protein YP_004013714.1 KEGG: mca:MCA0217 hypothetical protein YP_004013715.1 KEGG: rpc:RPC_4465 hypothetical protein YP_004013716.1 KEGG: rpe:RPE_4535 NifT/FixU family protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein YP_004013717.1 PFAM: NifZ family protein; KEGG: msl:Msil_3640 NifZ family protein YP_004013718.1 PFAM: NifZ family protein; KEGG: azc:AZC_3419 iron-sulfur cofactor synthesis protein YP_004013719.1 PFAM: LRV FeS4 cluster domain protein; KEGG: bbt:BBta_5900 hypothetical protein YP_004013720.1 KEGG: rpt:Rpal_5108 tetratricopeptide TPR_2 repeat protein YP_004013721.1 KEGG: bbt:BBta_5902 iron-sulfur cluster assembly protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_004013722.1 KEGG: rpd:RPD_1064 4Fe-4S ferredoxin iron-sulfur binding YP_004013723.1 KEGG: mca:MCA0204 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; radical SAM domain protein YP_004013724.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce8696 long-chain fatty-acid--CoA ligase YP_004013725.1 PFAM: protein of unknown function DUF849; KEGG: rfr:Rfer_2814 hypothetical protein YP_004013726.1 PFAM: carbamoyl-phosphate synthase L chain ATP-binding; carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: rfr:Rfer_2815 carbamoyl-phosphate synthase L chain, ATP-binding YP_004013727.1 KEGG: bra:BRADO2978 signal peptide YP_004013728.1 PFAM: amino acid permease-associated region; KEGG: bja:bll5532 hypothetical protein YP_004013729.1 KEGG: bja:blr5533 hypothetical protein YP_004013730.1 KEGG: xau:Xaut_1593 hypothetical protein YP_004013731.1 KEGG: pla:Plav_0952 hypothetical protein YP_004013732.1 KEGG: xau:Xaut_1595 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004013733.1 KEGG: apt:APA01_22260 hypothetical protein YP_004013734.1 KEGG: heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like YP_004013735.1 PFAM: GrpE protein; KEGG: rlg:Rleg_0008 GrpE protein YP_004013736.1 PFAM: sugar isomerase (SIS); KEGG: sugar isomerase (SIS) YP_004013737.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: oan:Oant_3124 ATPase BadF/BadG/BcrA/BcrD type YP_004013738.1 KEGG: ccs:CCNA_00453 glucosamine-6-phosphate deaminase; PFAM: sugar isomerase (SIS) YP_004013739.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: mpo:Mpop_4842 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_004013740.1 KEGG: rpe:RPE_3400 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_004013741.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: mlo:mll5831 biotin synthetase; PFAM: biotin and thiamin synthesis associated; radical SAM protein YP_004013742.1 KEGG: azl:AZL_d01090 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004013743.1 KEGG: msl:Msil_1389 hypothetical protein YP_004013744.1 KEGG: mgm:Mmc1_2093 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004013745.1 TIGRFAM: small GTP-binding protein; PFAM: Ras family protein; KEGG: chl:Chy400_1355 small GTP-binding protein; SMART: Ras small GTPase, Rab type YP_004013747.1 KEGG: vsp:VS_2469 DNA polymerase III subunit psi YP_004013748.1 PFAM: OmpA/MotB domain protein; KEGG: cyt:cce_4707 hypothetical protein YP_004013749.1 PFAM: Di-haem cytochrome C peroxidase; KEGG: azc:AZC_1340 hypothetical protein YP_004013750.1 KEGG: bra:BRADO0724 hypothetical protein YP_004013751.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bid:Bind_2970 TonB-dependent receptor YP_004013752.1 PFAM: FeoA family protein; KEGG: mag:amb2732 ferrous iron transporter A YP_004013753.1 KEGG: mag:amb2731 Fe2+ transporter protein B; TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_004013754.1 PFAM: protein of unknown function DUF1920; KEGG: rsq:Rsph17025_3856 hypothetical protein YP_004013755.1 PFAM: acetone carboxylase subunit gamma; KEGG: azc:AZC_2921 acetone carboxylase subunit gamma YP_004013756.1 PFAM: hydantoinase B/oxoprolinase; KEGG: mch:Mchl_5522 hydantoinase B/oxoprolinase YP_004013757.1 KEGG: mch:Mchl_5523 5-oxoprolinase (ATP-hydrolyzing); PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein YP_004013758.1 KEGG: azc:AZC_2924 sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: ATPase AAA YP_004013759.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bid:Bind_2073 TonB-dependent receptor plug YP_004013760.1 KEGG: bid:Bind_2034 ModE family transcriptional regulator; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR YP_004013761.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: mno:Mnod_5991 coenzyme PQQ biosynthesis protein B YP_004013762.1 TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_004013763.1 PFAM: ferredoxin; KEGG: rpc:RPC_1840 ferredoxin YP_004013764.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: oan:Oant_3290 aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_004013765.1 PFAM: protein of unknown function DUF583; KEGG: rsq:Rsph17025_1854 hypothetical protein YP_004013766.1 PFAM: protein of unknown function DUF519; KEGG: protein of unknown function DUF519 YP_004013767.1 KEGG: rpd:RPD_2508 hypothetical protein YP_004013768.1 KEGG: rpd:RPD_4408 5'-methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004013769.1 KEGG: pna:Pnap_3572 hypothetical protein YP_004013770.1 KEGG: azl:AZL_001010 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_004013771.1 KEGG: met:M446_2360 GTP cyclohydrolase; PFAM: GTP cyclohydrolase II YP_004013772.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004013773.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short-chain dehydrogenase/reductase SDR YP_004013774.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: bov:BOV_0690 excinuclease ABC subunit C; SMART: excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004013775.1 KEGG: rpt:Rpal_2482 hypothetical protein YP_004013776.1 KEGG: gbe:GbCGDNIH1_0245 hypothetical protein YP_004013777.1 PFAM: YCII-related; KEGG: kpn:KPN_03306 hypothetical protein YP_004013778.1 KEGG: oca:OCAR_4669 YbaK/EbsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004013779.1 TIGRFAM: 5-aminolevulinic acid synthase; KEGG: pla:Plav_2905 5-aminolevulinate synthase; PFAM: aminotransferase class I and II YP_004013780.1 KEGG: rpb:RPB_4142 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; carbamoyl-phosphate synthase small chain YP_004013781.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: mes:Meso_3035 3-hydroxybutyryl-CoA dehydrogenase YP_004013782.1 PFAM: electron transfer flavoprotein subunit alpha ; electron transfer flavoprotein alpha/beta-subunit; KEGG: pla:Plav_1607 electron transfer flavoprotein subunit alpha YP_004013783.1 PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: mrd:Mrad2831_2960 electron transfer flavoprotein alpha/beta-subunit YP_004013784.1 PFAM: rhomboid family protein; KEGG: xau:Xaut_2160 rhomboid family protein YP_004013785.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: mpo:Mpop_1702 ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; lipid A 3-O-deacylase-related YP_004013786.1 KEGG: amu:Amuc_1892 hypothetical protein YP_004013787.1 KEGG: pzu:PHZ_c1906 hypothetical protein; TIGRFAM: methyltransferase; PFAM: protein of unknown function DUF2260 YP_004013788.1 PFAM: protein of unknown function DUF323; KEGG: msl:Msil_3038 protein of unknown function DUF323 YP_004013789.1 KEGG: pzu:PHZ_c0224 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1052 YP_004013790.1 KEGG: pvx:PVX_112690 tryptophan-rich antigen (Pv-fam-a) YP_004013791.1 KEGG: vvy:VV0233 hypothetical protein YP_004013792.1 KEGG: azc:AZC_0797 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004013793.1 PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_0383 hypothetical protein YP_004013794.1 PFAM: protein of unknown function DUF55; KEGG: pla:Plav_1341 hypothetical protein YP_004013795.1 KEGG: ang:An01g09380 hypothetical protein YP_004013796.1 KEGG: oca:OCAR_4436 hypothetical protein YP_004013797.1 PFAM: protein of unknown function YGGT; KEGG: rce:RC1_2874 hypothetical protein YP_004013798.1 PFAM: protein of unknown function DUF167; KEGG: mlo:msl4154 hypothetical protein YP_004013799.1 KEGG: nar:Saro_3300 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004013800.1 PFAM: glutamine amidotransferase class-I; KEGG: bbt:BBta_0273 glutamine amidotransferase YP_004013801.1 PFAM: NUDIX hydrolase; KEGG: ape:APE_2080.1 ADP-ribose pyrophosphatase YP_004013802.1 PFAM: hypothetical protein; KEGG: rpt:Rpal_1260 hypothetical protein YP_004013803.1 KEGG: mno:Mnod_2550 multidrug resistance efflux pump-like protein YP_004013804.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: met:M446_3311 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004013805.1 KEGG: mno:Mnod_2548 general secretion pathway protein E YP_004013806.1 KEGG: nwi:Nwi_2055 hypothetical protein YP_004013807.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: pla:Plav_1053 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_004013808.1 KEGG: ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004013809.1 KEGG: oca:OCAR_4230 arsenic resistance protein; TIGRFAM: arsenic resistance protein; PFAM: sodium symporter YP_004013810.1 TIGRFAM: arsenate reductase; KEGG: mes:Meso_4201 arsenate reductase; PFAM: arsenate reductase YP_004013811.1 KEGG: xau:Xaut_0875 protein tyrosine phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_004013812.1 PFAM: methyltransferase type 11; KEGG: rpd:RPD_3422 arsenite S-adenosylmethyltransferase YP_004013813.1 KEGG: rpt:Rpal_4079 transcriptional regulator, MarR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004013814.1 KEGG: mag:amb2571 peptide ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_004013815.1 KEGG: bbt:BBta_4530 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_004013816.1 KEGG: mpo:Mpop_4997 protein tyrosine phosphatase; PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_004013817.1 PFAM: fructosamine/ketosamine-3-kinase; KEGG: msl:Msil_2312 aminoglycoside phosphotransferase YP_004013818.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: sjp:SJA_C1-16950 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein; prolyl-tRNA synthetase, class II-like YP_004013819.1 KEGG: rpc:RPC_4046 CBS domain-containing protein; PFAM: hypothetical protein; SMART: hypothetical protein YP_004013820.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: reh:H16_A0296 membrane associated dehydrogenase (flavoprotein) YP_004013821.1 KEGG: bmr:BMI_II1066 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_004013822.1 manually curated; PFAM: protein-tyrosine phosphatase, low molecular weight; KEGG: msl:Msil_3072 protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight YP_004013823.1 KEGG: phenylalanyl-tRNA synthetase subunit beta YP_004013824.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: mlo:mlr1179 lipid A biosynthesis lauroyl acyltransferase YP_004013825.1 KEGG: azc:AZC_1998 ubiquinone biosynthesis hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_004013826.1 KEGG: oca:OCAR_4436 hypothetical protein YP_004013827.1 KEGG: bbt:BBta_4844 ABC transporter (substrate-binding protein) YP_004013828.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rsq:Rsph17025_0750 binding-protein-dependent transporters inner membrane component YP_004013829.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rsq:Rsph17025_0749 binding-protein-dependent transporters inner membrane component YP_004013830.1 KEGG: rsq:Rsph17025_0748 ABC transporter; PFAM: ABC transporter; SMART: ATPase AAA YP_004013831.1 PFAM: radical SAM protein; KEGG: rpe:RPE_3191 radical SAM domain-containing protein YP_004013832.1 PFAM: major facilitator superfamily MFS_1; KEGG: rci:RCIX725 major facilitator superfamily permease YP_004013833.1 KEGG: rsq:Rsph17025_0774 nitrogenase; PFAM: NifH/frxC-family protein YP_004013834.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpe:RPE_3189 oxidoreductase/nitrogenase, component 1 YP_004013835.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpt:Rpal_2888 oxidoreductase/nitrogenase component 1 YP_004013836.1 KEGG: xau:Xaut_3410 TPR repeat-containing protein; TIGRFAM: cytochrome C family protein; SMART: Tetratricopeptide repeat YP_004013837.1 PFAM: sulfatase; KEGG: ava:Ava_0111 sulfatase YP_004013838.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: TonB-dependent receptor YP_004013839.1 TIGRFAM: TonB family protein; KEGG: bid:Bind_0529 TonB family protein YP_004013840.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: msl:Msil_3137 MotA/TolQ/ExbB proton channel YP_004013841.1 KEGG: bid:Bind_0527 protein TolR; TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR YP_004013842.1 PFAM: integrase; KEGG: nwi:Nwi_2917 integrase, catalytic region YP_004013843.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: aeh:Mlg_1269 hypothetical protein YP_004013844.1 KEGG: mrd:Mrad2831_5990 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein YP_004013845.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bpt:Bpet0411 ABC transporter permease YP_004013846.1 KEGG: met:M446_0056 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013847.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: mrd:Mrad2831_4214 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004013848.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; KEGG: mno:Mnod_3706 D-galactarate dehydratase/altronate hydrolase domain protein YP_004013849.1 PFAM: SAF domain protein; KEGG: mrd:Mrad2831_5980 hypothetical protein YP_004013850.1 KEGG: mag:amb1857 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; PFAM: regulatory protein Crp; SMART: regulatory protein Crp YP_004013851.1 KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; amino acid permease-associated region YP_004013852.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cno:NT01CX_1210 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004013853.1 KEGG: fsu:Fisuc_0156 hypothetical protein YP_004013854.1 PFAM: cupin; KEGG: rpt:Rpal_2588 hypothetical protein YP_004013855.1 SMART: extracellular solute-binding protein family 3; KEGG: msl:Msil_2671 NMT1/THI5 like domain protein YP_004013856.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: msl:Msil_2672 binding-protein-dependent transport systems inner membrane component YP_004013857.1 KEGG: bja:bll6453 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004013858.1 PFAM: protein of unknown function DUF1847; KEGG: cbl:CLK_0240 metal-binding protein YP_004013859.1 PFAM: dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: rpt:Rpal_2599 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004013860.1 KEGG: rpa:RPA2634 nitrogenase iron-molybdenum cofactor biosynthesis protein NifB; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_004013861.1 TIGRFAM: nitrogenase iron protein; KEGG: rpt:Rpal_2907 nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_004013862.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpt:Rpal_2908 nitrogenase YP_004013863.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: rpa:RPA2637 nitrogenase iron-molybdenum protein subunit NifK-like protein YP_004013864.1 KEGG: tps:THAPSDRAFT_269662 hypothetical protein YP_004013865.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: azl:AZL_c02520 cystathionine gamma-synthase YP_004013866.1 PFAM: OsmC family protein; KEGG: rsq:Rsph17025_0781 OsmC family protein YP_004013867.1 KEGG: rsq:Rsph17025_0782 acetate--CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_004013868.1 KEGG: xau:Xaut_3460 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components-like protein YP_004013869.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component YP_004013870.1 KEGG: mno:Mnod_4887 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013871.1 PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; KEGG: dvu:DVU2272 formate acetyltransferase YP_004013872.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: dvu:DVU2271 pyruvate formate-lyase activating enzyme, PFAM: radical SAM protein YP_004013873.1 KEGG: rpt:Rpal_2590 hypothetical protein YP_004013874.1 PFAM: enoyl-CoA hydratase/isomerase; KEGG: rpt:Rpal_2559 enoyl-CoA hydratase YP_004013875.1 KEGG: bid:Bind_0527 protein TolR; TIGRFAM: protein TolR; PFAM: biopolymertransporter ExbD/TolR YP_004013876.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: msl:Msil_3137 MotA/TolQ/ExbB proton channel YP_004013877.1 TIGRFAM: TonB family protein; KEGG: bid:Bind_0529 TonB family protein YP_004013879.1 KEGG: cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit YP_004013880.1 KEGG: mag:amb1848 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004013881.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: TonB-dependent receptor YP_004013882.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gur:Gura_3877 2-hydroxyglutaryl-CoA dehydratase, D-component YP_004013883.1 KEGG: sme:SMc02346 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA YP_004013884.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gur:Gura_3875 binding-protein-dependent transport systems inner membrane component YP_004013885.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: gur:Gura_3878 2-hydroxyglutaryl-CoA dehydratase, D-component YP_004013886.1 TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; KEGG: gur:Gura_3874 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_004013887.1 TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: mpl:Mpal_1148 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004013888.1 PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0752 transporter YP_004013889.1 KEGG: sus:acid_3848 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA YP_004013890.1 KEGG: sus:acid_0453 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: ATPase AAA YP_004013891.1 KEGG: rpc:RPC_4494 Crp/FNR family transcriptional regulator; PFAM: regulatory protein Crp; SMART: regulatory protein Crp YP_004013892.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: pla:Plav_3297 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_004013893.1 PFAM: methyltransferase type 11; KEGG: xal:XALc_0754 methyltransferase protein YP_004013894.1 KEGG: rpe:RPE_0425 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA YP_004013895.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: rpa:RPA0535 ATP-dependent helicase HrpB; SMART: helicase domain protein; DEAD-like helicase YP_004013896.1 KEGG: rpc:RPC_0420 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB YP_004013897.1 KEGG: pvx:PVX_092975 erythrocyte binding protein 1 YP_004013898.1 KEGG: mno:Mnod_3005 hypothetical protein YP_004013899.1 KEGG: rpd:RPD_3026 peptidase M15D, VanX D-ala-D-ala dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase YP_004013900.1 KEGG: phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_004013901.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: scl:sce5468 glutathione-regulated potassium-efflux system protein KefC YP_004013902.1 KEGG: rec:RHECIAT_PC0000664 hypothetical protein YP_004013903.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_3230 GCN5-related N-acetyltransferase YP_004013904.1 KEGG: oan:Oant_2417 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; NADH-quinone oxidoreductase chain G YP_004013905.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rpd:RPD_2878 NADH dehydrogenase subunit H YP_004013906.1 KEGG: rhi:NGR_c10580 NADH dehydrogenase, chain I; TIGRFAM: NADH-quinone oxidoreductase, chain I YP_004013907.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: azc:AZC_1677 NADH ubiquinone oxidoreductase chain J protein YP_004013908.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rhi:NGR_c10600 transmembrane NADH-ubiquinone oxidoreductase subunit YP_004013909.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: azc:AZC_1679 NADH-plastoquinone oxidoreductase chain 5 protein; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH dehydrogenase subunit 5 domain protein YP_004013910.1 KEGG: rpb:RPB_2586 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004013911.1 KEGG: pla:Plav_3213 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_004013912.1 KEGG: pla:Plav_3212 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004013913.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: ara:Arad_1867 metallo-beta-lactamase family protein YP_004013914.1 TIGRFAM: methylmalonyl-CoA epimerase; KEGG: xau:Xaut_4617 methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_004013915.1 KEGG: apb:SAR116_0159 protein of unknown function DUF1467 YP_004013916.1 KEGG: alv:Alvin_1082 precorrin 3B synthase CobZ; TIGRFAM: precorrin 3B synthase CobZ; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004013917.1 TIGRFAM: CitB domain protein; KEGG: rru:Rru_A2987 hypothetical protein YP_004013918.1 KEGG: bbt:BBta_3154 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_004013919.1 KEGG: bbt:BBta_3152 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004013920.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: bbt:BBta_3151 CobE protein YP_004013921.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: bbt:BBta_3150 precorrin-6Y C5,15-methyltransferase (decarboxylating); PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004013922.1 TIGRFAM: precorrin-6x reductase; KEGG: bra:BRADO4902 precorrin-6A reductase; PFAM: precorrin-6x reductase CbiJ/CobK YP_004013923.1 TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: bra:BRADO4903 precorrin-3B C(17)-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004013924.1 KEGG: bbt:BBta_3147 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004013925.1 KEGG: bra:BRADO4905 precorrin-8X methylmutase; PFAM: precorrin-8X methylmutase CbiC/CobH YP_004013926.1 KEGG: bra:BRADO4914 cobalamin biosynthetic protein (anaerobic pathway of cobalamin biosynthesis, CobD); TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB YP_004013927.1 KEGG: bra:BRADO4915 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II YP_004013928.1 KEGG: rpt:Rpal_3074 hypothetical protein YP_004013929.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis protein; radical SAM domain protein; KEGG: mpo:Mpop_2774 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004013930.1 PFAM: nitroreductase; KEGG: avn:Avin_15580 nitroreductase YP_004013931.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: tgr:Tgr7_3164 protein of unknown function DUF224 cysteine-rich region domain protein YP_004013932.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: hya:HY04AAS1_1611 NAD-dependent epimerase/dehydratase YP_004013933.1 PFAM: glycosyl transferase group 1; KEGG: pub:SAR11_0559 1,2-N-acetylglucosaminetransferase YP_004013934.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: msl:Msil_2074 homoserine dehydrogenase YP_004013935.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: mes:Meso_0989 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein YP_004013936.1 PFAM: polysaccharide deacetylase; KEGG: oca:OCAR_5748 polysaccharide deacetylase YP_004013937.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: bra:BRADO1833 hypothetical protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver YP_004013938.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_004013939.1 PFAM: glycosyl transferase family 25; KEGG: oca:OCAR_5511 glycosyl transferase YP_004013940.1 TIGRFAM: NADH-quinone oxidoreductase subunit beta; KEGG: rlg:Rleg_5810 NADH-quinone oxidoreductase subunit beta; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_004013941.1 KEGG: xau:Xaut_4631 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004013942.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: bja:bll4916 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_004013943.1 KEGG: sro:Sros_1937 permease-like protein YP_004013944.1 KEGG: vfm:VFMJ11_1382 copper-translocating P-type ATPase YP_004013945.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: azc:AZC_1671 NADH dehydrogenase; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004013946.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: bja:bll4912 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004013947.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mrd:Mrad2831_6397 short-chain dehydrogenase/reductase SDR YP_004013948.1 PFAM: protein of unknown function DUF1355; KEGG: pla:Plav_2231 hypothetical protein YP_004013949.1 TIGRFAM: conserved hypothetical protein; KEGG: hypothetical protein YP_004013950.1 KEGG: sme:SMc02704 hypothetical protein; manually curated; PFAM: protein of unknown function DUF58 YP_004013951.1 KEGG: rpe:RPE_0940 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: ATPase AAA YP_004013952.1 PFAM: NUDIX hydrolase; KEGG: mrd:Mrad2831_0599 NUDIX hydrolase YP_004013953.1 PFAM: polynucleotide adenylyltransferase region; KEGG: azc:AZC_3505 poly(A) polymerase YP_004013954.1 KEGG: pkn:PKH_112420 KIR protein YP_004013955.1 KEGG: sit:TM1040_3031 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20