; retrieve-seq -v -org Rickettsia_massiliae_AZT80_uid86751 -all -type downstream -feattype CDS -from 0 -to -2 -format wc -nocomment -label id,ctg,reg_left,reg_right,orf_strand -o /software/CC/bio/opt/rsat/rsa-tools//public_html/data/genomes/Rickettsia_massiliae_AZT80_uid86751/genome/Rickettsia_massiliae_AZT80_uid86751_stop_codons.wc
; organism      	Rickettsia_massiliae_AZT80_uid86751
; sequence type 	downstream
; feature type  	cds
; Output format 	wc
; Line width    	60
; relative coordinates
;        from    -2
;        to      0
;        size    3
; Queries       	1207
;
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YP_005301810.1|NC_016931.1|428899|428901|D	\TAG\
YP_005301811.1|NC_016931.1|429178|429180|D	\TAG\
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YP_005301818.1|NC_016931.1|434422|434424|D	\TAA\
YP_005301819.1|NC_016931.1|434492|434494|D	\TGA\
YP_005301820.1|NC_016931.1|436593|436595|D	\TAA\
YP_005301821.1|NC_016931.1|438339|438341|D	\TAA\
YP_005301822.1|NC_016931.1|439320|439322|D	\TGA\
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YP_005301825.1|NC_016931.1|441654|441656|D	\TGA\
YP_005301826.1|NC_016931.1|442167|442169|D	\TAG\
YP_005301827.1|NC_016931.1|443154|443156|D	\TAA\
YP_005301828.1|NC_016931.1|451040|451042|D	\TGA\
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YP_005301834.1|NC_016931.1|458749|458751|R	\TAG\
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YP_005301838.1|NC_016931.1|464348|464350|D	\TAA\
YP_005301839.1|NC_016931.1|465065|465067|D	\TAG\
YP_005301840.1|NC_016931.1|466379|466381|D	\TAA\
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YP_005301842.1|NC_016931.1|467163|467165|R	\TAA\
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YP_005301844.1|NC_016931.1|471524|471526|R	\TAA\
YP_005301845.1|NC_016931.1|474589|474591|R	\TAA\
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YP_005301850.1|NC_016931.1|483009|483011|D	\TGA\
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YP_005301852.1|NC_016931.1|485544|485546|D	\TAA\
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YP_005301854.1|NC_016931.1|488887|488889|R	\TAA\
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YP_005301858.1|NC_016931.1|493530|493532|D	\TGA\
YP_005301859.1|NC_016931.1|493869|493871|D	\TAG\
YP_005301860.1|NC_016931.1|494161|494163|D	\TAG\
YP_005301861.1|NC_016931.1|496086|496088|D	\TGA\
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YP_005301864.1|NC_016931.1|497686|497688|R	\TAA\
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YP_005301866.1|NC_016931.1|499950|499952|R	\TAA\
YP_005301867.1|NC_016931.1|500355|500357|R	\TAG\
YP_005301868.1|NC_016931.1|501792|501794|R	\TGA\
YP_005301869.1|NC_016931.1|504097|504099|D	\TGA\
YP_005301870.1|NC_016931.1|505144|505146|D	\TAG\
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YP_005301872.1|NC_016931.1|507829|507831|D	\TAA\
YP_005301873.1|NC_016931.1|509586|509588|D	\TAG\
YP_005301874.1|NC_016931.1|511012|511014|D	\TAA\
YP_005301875.1|NC_016931.1|512015|512017|D	\TAA\
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YP_005301877.1|NC_016931.1|513360|513362|R	\TAG\
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YP_005301879.1|NC_016931.1|515115|515117|R	\TAA\
YP_005301880.1|NC_016931.1|515519|515521|R	\TGA\
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YP_005301883.1|NC_016931.1|517812|517814|R	\TAA\
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YP_005301885.1|NC_016931.1|520895|520897|D	\TAA\
YP_005301886.1|NC_016931.1|521543|521545|D	\TAA\
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YP_005301888.1|NC_016931.1|522572|522574|D	\TAA\
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YP_005301890.1|NC_016931.1|523697|523699|D	\TAA\
YP_005301891.1|NC_016931.1|524065|524067|D	\TAA\
YP_005301892.1|NC_016931.1|524720|524722|D	\TAA\
YP_005301893.1|NC_016931.1|525145|525147|D	\TGA\
YP_005301894.1|NC_016931.1|525353|525355|D	\TAA\
YP_005301895.1|NC_016931.1|525588|525590|D	\TAA\
YP_005301896.1|NC_016931.1|526031|526033|D	\TAA\
YP_005301897.1|NC_016931.1|526361|526363|D	\TAA\
YP_005301898.1|NC_016931.1|526900|526902|D	\TAA\
YP_005301899.1|NC_016931.1|527223|527225|D	\TAA\
YP_005301900.1|NC_016931.1|527641|527643|D	\TAA\
YP_005301901.1|NC_016931.1|528184|528186|D	\TAA\
YP_005301902.1|NC_016931.1|528556|528558|D	\TAG\
YP_005301903.1|NC_016931.1|529104|529106|D	\TAA\
YP_005301904.1|NC_016931.1|529319|529321|D	\TAA\
YP_005301905.1|NC_016931.1|529794|529796|D	\TAG\
YP_005301906.1|NC_016931.1|531099|531101|D	\TAA\
YP_005301907.1|NC_016931.1|531753|531755|D	\TGA\
YP_005301908.1|NC_016931.1|532191|532193|D	\TAA\
YP_005301909.1|NC_016931.1|532599|532601|D	\TAA\
YP_005301910.1|NC_016931.1|533640|533642|D	\TAA\
YP_005301911.1|NC_016931.1|534061|534063|D	\TAA\
YP_005301912.1|NC_016931.1|534352|534354|D	\TAA\
YP_005301913.1|NC_016931.1|535843|535845|R	\TAG\
YP_005301914.1|NC_016931.1|536467|536469|R	\TAA\
YP_005301915.1|NC_016931.1|536643|536645|R	\TAG\
YP_005301916.1|NC_016931.1|537259|537261|R	\TGA\
YP_005301917.1|NC_016931.1|537958|537960|R	\TAA\
YP_005301918.1|NC_016931.1|539156|539158|R	\TAA\
YP_005301919.1|NC_016931.1|540640|540642|D	\TAG\
YP_005301920.1|NC_016931.1|541963|541965|D	\TAG\
YP_005301921.1|NC_016931.1|544372|544374|D	\TAA\
YP_005301922.1|NC_016931.1|546042|546044|D	\TAA\
YP_005301923.1|NC_016931.1|547552|547554|D	\TAG\
YP_005301924.1|NC_016931.1|549629|549631|R	\TAG\
YP_005301925.1|NC_016931.1|550162|550164|R	\TGA\
YP_005301926.1|NC_016931.1|551920|551922|R	\TAA\
YP_005301927.1|NC_016931.1|553683|553685|D	\TGA\
YP_005301928.1|NC_016931.1|553796|553798|D	\TAA\
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YP_005301930.1|NC_016931.1|557811|557813|R	\TAA\
YP_005301931.1|NC_016931.1|559677|559679|D	\TAG\
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YP_005302000.1|NC_016931.1|633368|633370|D	\TAG\
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YP_005302002.1|NC_016931.1|634320|634322|D	\TAA\
YP_005302003.1|NC_016931.1|635242|635244|D	\TAA\
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YP_005302005.1|NC_016931.1|638123|638125|D	\TAG\
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YP_005302008.1|NC_016931.1|641435|641437|D	\TAA\
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YP_005302010.1|NC_016931.1|642066|642068|R	\TAA\
YP_005302011.1|NC_016931.1|644390|644392|R	\TAA\
YP_005302012.1|NC_016931.1|645499|645501|D	\TAA\
YP_005302013.1|NC_016931.1|646422|646424|D	\TAA\
YP_005302014.1|NC_016931.1|646827|646829|D	\TGA\
YP_005302015.1|NC_016931.1|648856|648858|D	\TAA\
YP_005302016.1|NC_016931.1|649225|649227|D	\TAG\
YP_005302017.1|NC_016931.1|649971|649973|D	\TAA\
YP_005302018.1|NC_016931.1|651742|651744|D	\TAG\
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YP_005302158.1|NC_016931.1|786570|786572|R	\TAG\
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YP_005302161.1|NC_016931.1|790092|790094|R	\TGA\
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YP_005302163.1|NC_016931.1|792994|792996|D	\TAG\
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YP_005302166.1|NC_016931.1|799406|799408|D	\TAG\
YP_005302167.1|NC_016931.1|800337|800339|D	\TGA\
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YP_005302178.1|NC_016931.1|811701|811703|D	\TAG\
YP_005302179.1|NC_016931.1|814073|814075|D	\TGA\
YP_005302180.1|NC_016931.1|815191|815193|D	\TAA\
YP_005302181.1|NC_016931.1|815793|815795|D	\TAG\
YP_005302182.1|NC_016931.1|816346|816348|D	\TAG\
YP_005302183.1|NC_016931.1|817248|817250|D	\TAG\
YP_005302184.1|NC_016931.1|818807|818809|D	\TAA\
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YP_005302257.1|NC_016931.1|895255|895257|D	\TAA\
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YP_005302260.1|NC_016931.1|898975|898977|R	\TAA\
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YP_005302284.1|NC_016931.1|924875|924877|D	\TAA\
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YP_005302300.1|NC_016931.1|938160|938162|R	\TAA\
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YP_005302307.1|NC_016931.1|946070|946072|R	\TGA\
YP_005302308.1|NC_016931.1|947343|947345|D	\TAA\
YP_005302309.1|NC_016931.1|947679|947681|D	\TGA\
YP_005302310.1|NC_016931.1|948789|948791|R	\TAA\
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YP_005302312.1|NC_016931.1|950089|950091|R	\TAA\
YP_005302313.1|NC_016931.1|951785|951787|D	\TAA\
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YP_005302316.1|NC_016931.1|955682|955684|R	\TGA\
YP_005302317.1|NC_016931.1|956752|956754|R	\TAG\
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YP_005302332.1|NC_016931.1|974267|974269|D	\TGA\
YP_005302333.1|NC_016931.1|974973|974975|D	\TAA\
YP_005302334.1|NC_016931.1|976247|976249|D	\TAA\
YP_005302335.1|NC_016931.1|976610|976612|D	\TAG\
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YP_005302351.1|NC_016931.1|990934|990936|D	\TAA\
YP_005302352.1|NC_016931.1|991483|991485|D	\TAA\
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YP_005302355.1|NC_016931.1|993979|993981|D	\TAA\
YP_005302356.1|NC_016931.1|994783|994785|D	\TAA\
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YP_005302358.1|NC_016931.1|995880|995882|R	\TAA\
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YP_005302365.1|NC_016931.1|1006035|1006037|D	\TAA\
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YP_005302367.1|NC_016931.1|1007726|1007728|D	\TAA\
YP_005302368.1|NC_016931.1|1009011|1009013|D	\TAG\
YP_005302369.1|NC_016931.1|1011342|1011344|D	\TAA\
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YP_005302373.1|NC_016931.1|1015425|1015427|R	\TAA\
YP_005302374.1|NC_016931.1|1016099|1016101|R	\TGA\
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YP_005302376.1|NC_016931.1|1018200|1018202|D	\TAA\
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YP_005302378.1|NC_016931.1|1020123|1020125|R	\TGA\
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YP_005302381.1|NC_016931.1|1024146|1024148|D	\TAA\
YP_005302382.1|NC_016931.1|1024603|1024605|D	\TAA\
YP_005302383.1|NC_016931.1|1025134|1025136|D	\TAA\
YP_005302384.1|NC_016931.1|1026143|1026145|D	\TAA\
YP_005302385.1|NC_016931.1|1027911|1027913|D	\TAA\
YP_005302386.1|NC_016931.1|1029631|1029633|D	\TAG\
YP_005302387.1|NC_016931.1|1031096|1031098|D	\TAA\
YP_005302388.1|NC_016931.1|1031049|1031051|R	\TAA\
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YP_005302390.1|NC_016931.1|1033731|1033733|R	\TAA\
YP_005302391.1|NC_016931.1|1034162|1034164|R	\TAA\
YP_005302392.1|NC_016931.1|1035792|1035794|D	\TAA\
YP_005302393.1|NC_016931.1|1036049|1036051|D	\TAG\
YP_005302394.1|NC_016931.1|1037817|1037819|D	\TAA\
YP_005302395.1|NC_016931.1|1038382|1038384|D	\TGA\
YP_005302396.1|NC_016931.1|1038962|1038964|R	\TGA\
YP_005302397.1|NC_016931.1|1039672|1039674|R	\TAA\
YP_005302398.1|NC_016931.1|1041067|1041069|R	\TAA\
YP_005302399.1|NC_016931.1|1042593|1042595|R	\TAA\
YP_005302400.1|NC_016931.1|1044932|1044934|D	\TAA\
YP_005302401.1|NC_016931.1|1045032|1045034|R	\TGA\
YP_005302402.1|NC_016931.1|1046567|1046569|D	\TAA\
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YP_005302404.1|NC_016931.1|1048133|1048135|R	\TAA\
YP_005302405.1|NC_016931.1|1049912|1049914|R	\TAA\
YP_005302406.1|NC_016931.1|1051070|1051072|D	\TAG\
YP_005302407.1|NC_016931.1|1053919|1053921|D	\TGA\
YP_005302408.1|NC_016931.1|1054061|1054063|R	\TAG\
YP_005302409.1|NC_016931.1|1054840|1054842|R	\TAA\
YP_005302410.1|NC_016931.1|1055648|1055650|R	\TAA\
YP_005302411.1|NC_016931.1|1056925|1056927|D	\TAA\
YP_005302412.1|NC_016931.1|1057004|1057006|R	\TAA\
YP_005302413.1|NC_016931.1|1059259|1059261|D	\TAG\
YP_005302414.1|NC_016931.1|1059503|1059505|R	\TAG\
YP_005302415.1|NC_016931.1|1060925|1060927|R	\TAA\
YP_005302416.1|NC_016931.1|1062867|1062869|R	\TAA\
YP_005302417.1|NC_016931.1|1063868|1063870|R	\TGA\
YP_005302418.1|NC_016931.1|1065494|1065496|R	\TAA\
YP_005302419.1|NC_016931.1|1065954|1065956|R	\TAG\
YP_005302420.1|NC_016931.1|1066738|1066740|R	\TAA\
YP_005302421.1|NC_016931.1|1068065|1068067|D	\TAG\
YP_005302422.1|NC_016931.1|1068825|1068827|D	\TAA\
YP_005302423.1|NC_016931.1|1069258|1069260|D	\TGA\
YP_005302424.1|NC_016931.1|1070556|1070558|D	\TAA\
YP_005302425.1|NC_016931.1|1072163|1072165|D	\TAA\
YP_005302426.1|NC_016931.1|1072614|1072616|D	\TAA\
YP_005302427.1|NC_016931.1|1073028|1073030|D	\TAA\
YP_005302428.1|NC_016931.1|1074568|1074570|D	\TAA\
YP_005302429.1|NC_016931.1|1076942|1076944|D	\TAG\
YP_005302430.1|NC_016931.1|1078198|1078200|D	\TAG\
YP_005302431.1|NC_016931.1|1079185|1079187|R	\TAA\
YP_005302432.1|NC_016931.1|1079336|1079338|R	\TGA\
YP_005302433.1|NC_016931.1|1080188|1080190|R	\TAA\
YP_005302434.1|NC_016931.1|1080372|1080374|R	\TGA\
YP_005302435.1|NC_016931.1|1081118|1081120|R	\TAG\
YP_005302436.1|NC_016931.1|1083979|1083981|R	\TAA\
YP_005302437.1|NC_016931.1|1084157|1084159|R	\TAG\
YP_005302438.1|NC_016931.1|1084818|1084820|D	\TAG\
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YP_005302498.1|NC_016931.1|1136711|1136713|R	\TAA\
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YP_005302515.1|NC_016931.1|1154787|1154789|R	\TAA\
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YP_005302517.1|NC_016931.1|1156964|1156966|R	\TAA\
YP_005302518.1|NC_016931.1|1157175|1157177|R	\TAG\
YP_005302519.1|NC_016931.1|1157695|1157697|R	\TAG\
YP_005302520.1|NC_016931.1|1158679|1158681|R	\TAA\
YP_005302521.1|NC_016931.1|1159054|1159056|R	\TAG\
YP_005302522.1|NC_016931.1|1159581|1159583|R	\TGA\
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YP_005302527.1|NC_016931.1|1162871|1162873|R	\TAA\
YP_005302528.1|NC_016931.1|1164615|1164617|R	\TGA\
YP_005302529.1|NC_016931.1|1167292|1167294|R	\TAA\
YP_005302530.1|NC_016931.1|1168927|1168929|R	\TAG\
YP_005302531.1|NC_016931.1|1170694|1170696|R	\TAA\
YP_005302532.1|NC_016931.1|1176593|1176595|D	\TAG\
YP_005302533.1|NC_016931.1|1176825|1176827|R	\TAG\
YP_005302534.1|NC_016931.1|1177963|1177965|R	\TAG\
YP_005302535.1|NC_016931.1|1182177|1182179|D	\TAA\
YP_005302536.1|NC_016931.1|1182732|1182734|D	\TAA\
YP_005302537.1|NC_016931.1|1183131|1183133|D	\TAG\
YP_005302538.1|NC_016931.1|1184136|1184138|D	\TGA\
YP_005302539.1|NC_016931.1|1184456|1184458|D	\TAG\
YP_005302540.1|NC_016931.1|1184857|1184859|R	\TAA\
YP_005302541.1|NC_016931.1|1185832|1185834|R	\TAA\
YP_005302542.1|NC_016931.1|1186804|1186806|R	\TAG\
YP_005302543.1|NC_016931.1|1187159|1187161|R	\TAA\
YP_005302544.1|NC_016931.1|1187948|1187950|R	\TAA\
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YP_005302552.1|NC_016931.1|1197150|1197152|D	\TAA\
YP_005302553.1|NC_016931.1|1197986|1197988|D	\TAG\
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YP_005302557.1|NC_016931.1|1199991|1199993|D	\TAA\
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YP_005302561.1|NC_016931.1|1206278|1206280|D	\TAA\
YP_005302562.1|NC_016931.1|1206423|1206425|R	\TAA\
YP_005302563.1|NC_016931.1|1207524|1207526|R	\TAA\
YP_005302564.1|NC_016931.1|1208952|1208954|R	\TAA\
YP_005302565.1|NC_016931.1|1209154|1209156|R	\TAA\
YP_005302566.1|NC_016931.1|1209488|1209490|R	\TAA\
YP_005302567.1|NC_016931.1|1211230|1211232|D	\TAA\
YP_005302568.1|NC_016931.1|1211687|1211689|D	\TAA\
YP_005302569.1|NC_016931.1|1211865|1211867|D	\TGA\
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YP_005302571.1|NC_016931.1|1212326|1212328|D	\TAA\
YP_005302572.1|NC_016931.1|1212457|1212459|D	\TGA\
YP_005302573.1|NC_016931.1|1214066|1214068|D	\TAA\
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YP_005302575.1|NC_016931.1|1214969|1214971|R	\TGA\
YP_005302576.1|NC_016931.1|1216960|1216962|R	\TGA\
YP_005302577.1|NC_016931.1|1217858|1217860|R	\TGA\
YP_005302578.1|NC_016931.1|1218259|1218261|R	\TGA\
YP_005302579.1|NC_016931.1|1218592|1218594|R	\TAA\
YP_005302580.1|NC_016931.1|1220719|1220721|R	\TAA\
YP_005302581.1|NC_016931.1|1222368|1222370|D	\TGA\
YP_005302582.1|NC_016931.1|1224200|1224202|D	\TAA\
YP_005302583.1|NC_016931.1|1224593|1224595|D	\TAA\
YP_005302584.1|NC_016931.1|1224942|1224944|D	\TAG\
YP_005302585.1|NC_016931.1|1226130|1226132|D	\TGA\
YP_005302586.1|NC_016931.1|1226756|1226758|D	\TGA\
YP_005302587.1|NC_016931.1|1227268|1227270|D	\TAA\
YP_005302588.1|NC_016931.1|1227280|1227282|R	\TAA\
YP_005302589.1|NC_016931.1|1230416|1230418|D	\TAG\
YP_005302590.1|NC_016931.1|1232346|1232348|D	\TAA\
YP_005302591.1|NC_016931.1|1232969|1232971|D	\TAA\
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YP_005302595.1|NC_016931.1|1234804|1234806|R	\TAA\
YP_005302596.1|NC_016931.1|1236222|1236224|D	\TAG\
YP_005302597.1|NC_016931.1|1236948|1236950|D	\TGA\
YP_005302598.1|NC_016931.1|1237468|1237470|D	\TAG\
YP_005302599.1|NC_016931.1|1238039|1238041|D	\TAG\
YP_005302600.1|NC_016931.1|1239068|1239070|D	\TAG\
YP_005302601.1|NC_016931.1|1239598|1239600|R	\TAA\
YP_005302602.1|NC_016931.1|1241711|1241713|R	\TGA\
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YP_005302607.1|NC_016931.1|1247152|1247154|D	\TAA\
YP_005302608.1|NC_016931.1|1249098|1249100|D	\TGA\
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YP_005302611.1|NC_016931.1|1254548|1254550|D	\TAA\
YP_005302612.1|NC_016931.1|1255258|1255260|D	\TAA\
YP_005302613.1|NC_016931.1|1256218|1256220|D	\TAG\
YP_005302614.1|NC_016931.1|1256716|1256718|D	\TAA\
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YP_005302616.1|NC_016931.1|1258388|1258390|D	\TAA\
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YP_005302620.1|NC_016931.1|1262290|1262292|R	\TAA\
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YP_005320329.1|NC_016939.1|12033|12035|R	\TAA\
YP_005320330.1|NC_016939.1|12562|12564|R	\TAG\

; Host name	nic42
; Job started	2012-05-05.041259
; Job done	2012-05-05.041259
; Seconds	0.28
;	user	0.28
;	system	0.09
;	cuser	0
;	csystem	0