-- dump date 20120504_160526 -- class Genbank::CDS -- table cds_note -- id note YP_005392255.1 COG1981 Predicted membrane protein YP_005392256.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005392257.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005392258.1 COG1806 Uncharacterized protein conserved in bacteria YP_005392259.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005392260.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005392261.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005392262.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005392263.1 COG2337 Growth inhibitor YP_005392264.1 COG0506 Proline dehydrogenase YP_005392265.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005392266.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005392267.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005392269.1 COG0802 Predicted ATPase or kinase YP_005392270.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005392271.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005392273.1 COG0658 Predicted membrane metal-binding protein YP_005392279.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005392281.1 COG0711 F0F1-type ATP synthase, subunit b YP_005392282.1 COG0711 F0F1-type ATP synthase, subunit b YP_005392283.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005392285.1 COG0356 F0F1-type ATP synthase, subunit a YP_005392286.1 COG5336 Uncharacterized protein conserved in bacteria YP_005392287.1 COG1651 Protein-disulfide isomerase YP_005392288.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_005392290.1 COG0500 SAM-dependent methyltransferases YP_005392292.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005392293.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005392294.1 COG0262 Dihydrofolate reductase YP_005392295.1 COG0294 Dihydropteroate synthase and related enzymes. Potential operon component. YP_005392296.1 COG0294 Dihydropteroate synthase and related enzymes. Potential operon component. YP_005392297.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. Potential operon component. YP_005392298.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. Potential operon component. YP_005392305.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005392306.1 COG1678 Putative transcriptional regulator YP_005392307.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005392314.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005392317.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005392319.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005392320.1 COG1398 Fatty-acid desaturase YP_005392321.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005392322.1 COG0360 Ribosomal protein S6 YP_005392323.1 COG0238 Ribosomal protein S18 YP_005392324.1 COG0359 Ribosomal protein L9 YP_005392325.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005392326.1 COG0465 ATP-dependent Zn proteases YP_005392327.1 COG0270 Site-specific DNA methylase. Potential operon component. YP_005392328.1 COG0270 Site-specific DNA methylase. Potential operon component. YP_005392329.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005392330.1 COG3755 Uncharacterized protein conserved in bacteria YP_005392331.1 COG1565 Uncharacterized conserved protein YP_005392332.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005392333.1 COG0668 Small-conductance mechanosensitive channel YP_005392334.1 COG0706 Preprotein translocase subunit YidC YP_005392335.1 COG0558 Phosphatidylglycerophosphate synthase YP_005392337.1 COG0500 SAM-dependent methyltransferases YP_005392341.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005392342.1 COG3202 ATP/ADP translocase YP_005392343.1 COG2271 Sugar phosphate permease YP_005392344.1 COG0105 Nucleoside diphosphate kinase YP_005392345.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005392346.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005392347.1 COG1192 ATPases involved in chromosome partitioning YP_005392348.1 COG1475 Predicted transcriptional regulators YP_005392349.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005392351.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005392354.1 COG0316 Uncharacterized conserved protein YP_005392355.1 COG0232 dGTP triphosphohydrolase YP_005392356.1 COG0018 Arginyl-tRNA synthetase YP_005392358.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005392361.1 COG0717 Deoxycytidine deaminase YP_005392362.1 COG1952 Preprotein translocase subunit SecB YP_005392363.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005392364.1 COG2904 Uncharacterized protein conserved in bacteria YP_005392365.1 COG3820 Uncharacterized protein conserved in bacteria YP_005392366.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005392367.1 COG3047 Outer membrane protein W YP_005392368.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005392369.1 COG0477 Permeases of the major facilitator superfamily YP_005392374.1 COG0215 Cysteinyl-tRNA synthetase YP_005392375.1 COG0052 Ribosomal protein S2 YP_005392376.1 COG0264 Translation elongation factor Ts YP_005392377.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005392378.1 COG2121 Uncharacterized protein conserved in bacteria YP_005392379.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005392380.1 COG0457 FOG: TPR repeat YP_005392381.1 COG2853 Surface lipoprotein YP_005392382.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005392383.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005392385.1 COG0787 Alanine racemase YP_005392386.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005392387.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005392391.1 COG0227 Ribosomal protein L28 YP_005392392.1 COG0254 Ribosomal protein L31 YP_005392393.1 COG0218 Predicted GTPase YP_005392394.1 COG0548 Acetylglutamate kinase YP_005392395.1 COG3702 Type IV secretory pathway, VirB3 components YP_005392396.1 COG3451 Type IV secretory pathway, VirB4 components YP_005392397.1 COG3704 Type IV secretory pathway, VirB6 components YP_005392398.1 COG3704 Type IV secretory pathway, VirB6 components YP_005392399.1 COG3704 Type IV secretory pathway, VirB6 components YP_005392400.1 COG3704 Type IV secretory pathway, VirB6 components YP_005392401.1 COG3704 Type IV secretory pathway, VirB6 components YP_005392405.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005392406.1 COG0335 Ribosomal protein L19 YP_005392407.1 COG3750 Uncharacterized protein conserved in bacteria YP_005392408.1 COG0341 Preprotein translocase subunit SecF YP_005392409.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005392410.1 COG0681 Signal peptidase I YP_005392411.1 COG0571 dsRNA-specific ribonuclease YP_005392412.1 COG1159 GTPase YP_005392413.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005392414.1 COG0565 rRNA methylase YP_005392416.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_005392417.1 COG0489 ATPases involved in chromosome partitioning YP_005392418.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005392419.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005392420.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005392421.1 COG1054 Predicted sulfurtransferase YP_005392422.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005392424.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005392425.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005392426.1 COG0765 ABC-type amino acid transport system, permease component YP_005392427.1 COG0048 Ribosomal protein S12 YP_005392428.1 COG0049 Ribosomal protein S7 YP_005392429.1 COG0480 Translation elongation factors (GTPases) YP_005392430.1 COG0690 Preprotein translocase subunit SecE YP_005392431.1 COG0250 Transcription antiterminator YP_005392432.1 COG0080 Ribosomal protein L11 YP_005392433.1 COG0081 Ribosomal protein L1 YP_005392434.1 COG0244 Ribosomal protein L10 YP_005392435.1 COG0222 Ribosomal protein L7/L12 YP_005392436.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005392437.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005392439.1 COG0260 Leucyl aminopeptidase YP_005392440.1 COG1192 ATPases involved in chromosome partitioning YP_005392442.1 COG0173 Aspartyl-tRNA synthetase YP_005392444.1 COG0670 Integral membrane protein, interacts with FtsH YP_005392445.1 COG0289 Dihydrodipicolinate reductase YP_005392446.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005392447.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005392448.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005392449.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005392450.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005392452.1 COG0233 Ribosome recycling factor YP_005392453.1 COG0528 Uridylate kinase YP_005392454.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005392455.1 COG0477 Permeases of the major facilitator superfamily YP_005392456.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005392459.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005392460.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005392461.1 COG0781 Transcription termination factor YP_005392462.1 COG0293 23S rRNA methylase YP_005392465.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005392466.1 COG5508 Uncharacterized conserved small protein YP_005392467.1 COG1385 Uncharacterized protein conserved in bacteria YP_005392468.1 COG2155 Uncharacterized conserved protein YP_005392469.1 COG0841 Cation/multidrug efflux pump YP_005392470.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005392471.1 COG0470 ATPase involved in DNA replication YP_005392472.1 COG0541 Signal recognition particle GTPase YP_005392474.1 COG1505 Serine proteases of the peptidase family S9A YP_005392476.1 COG1505 Serine proteases of the peptidase family S9A. Potential operon component. YP_005392477.1 Potential operon component. YP_005392478.1 COG1505 Serine proteases of the peptidase family S9A. Potential operon component. YP_005392479.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005392481.1 COG0666 FOG: Ankyrin repeat YP_005392483.1 COG1301 Na+/H+-dicarboxylate symporters YP_005392484.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005392485.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005392486.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005392487.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005392488.1 COG2317 Zn-dependent carboxypeptidase YP_005392489.1 COG0497 ATPase involved in DNA repair YP_005392490.1 COG4105 DNA uptake lipoprotein YP_005392491.1 Potential operon component. YP_005392492.1 COG4572 Putative cation transport regulator. Potential operon component. YP_005392493.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005392494.1 COG0443 Molecular chaperone YP_005392495.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005392499.1 COG1466 DNA polymerase III, delta subunit YP_005392500.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_005392501.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005392502.1 COG3838 Type IV secretory pathway, VirB2 components (pilins) YP_005392504.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005392505.1 COG0457 FOG: TPR repeat YP_005392517.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005392518.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005392519.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_005392521.1 COG0633 Ferredoxin YP_005392522.1 COG0443 Molecular chaperone YP_005392523.1 COG1076 DnaJ-domain-containing proteins 1 YP_005392524.1 COG0164 Ribonuclease HII YP_005392525.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005392526.1 COG0695 Glutaredoxin and related proteins YP_005392527.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_005392528.1 COG0282 Acetate kinase YP_005392530.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005392532.1 COG1301 Na+/H+-dicarboxylate symporters YP_005392536.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005392537.1 COG0223 Methionyl-tRNA formyltransferase YP_005392538.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005392539.1 COG1485 Predicted ATPase YP_005392540.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005392542.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005392544.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005392545.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005392546.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005392547.1 COG4115 Uncharacterized protein conserved in bacteria YP_005392548.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005392549.1 COG0612 Predicted Zn-dependent peptidases YP_005392550.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005392552.1 COG0441 Threonyl-tRNA synthetase YP_005392559.1 COG1538 Outer membrane protein YP_005392560.1 COG3827 Uncharacterized protein conserved in bacteria YP_005392562.1 COG0666 FOG: Ankyrin repeat YP_005392563.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005392564.1 COG0793 Periplasmic protease YP_005392565.1 COG0642 Signal transduction histidine kinase YP_005392566.1 COG1729 Uncharacterized protein conserved in bacteria YP_005392568.1 COG1520 FOG: WD40-like repeat YP_005392569.1 COG0102 Ribosomal protein L13 YP_005392570.1 COG0103 Ribosomal protein S9 YP_005392571.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005392573.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005392574.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005392575.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005392576.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005392578.1 COG0688 Phosphatidylserine decarboxylase YP_005392579.1 COG1183 Phosphatidylserine synthase YP_005392580.1 COG1566 Multidrug resistance efflux pump YP_005392583.1 COG0271 Stress-induced morphogen (activity unknown) YP_005392584.1 COG2200 FOG: EAL domain YP_005392585.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005392586.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005392587.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005392588.1 COG1589 Cell division septal protein YP_005392589.1 COG0849 Actin-like ATPase involved in cell division YP_005392591.1 COG3474 Cytochrome c2 YP_005392593.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005392595.1 COG1530 Ribonucleases G and E YP_005392596.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005392597.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005392598.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005392599.1 COG0708 Exonuclease III YP_005392600.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005392601.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005392602.1 COG1217 Predicted membrane GTPase involved in stress response YP_005392606.1 COG2825 Outer membrane protein YP_005392607.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005392608.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005392609.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_005392612.1 COG0723 Rieske Fe-S protein YP_005392613.1 COG1290 Cytochrome b subunit of the bc complex YP_005392615.1 COG2857 Cytochrome c1 YP_005392616.1 COG0071 Molecular chaperone (small heat shock protein) YP_005392618.1 COG4804 Uncharacterized conserved protein YP_005392619.1 COG1186 Protein chain release factor B YP_005392620.1 COG0481 Membrane GTPase LepA YP_005392621.1 Potentially inactive due to overlap with tRNA YP_005392624.1 COG3093 Plasmid maintenance system antidote protein YP_005392631.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005392632.1 COG0477 Permeases of the major facilitator superfamily YP_005392633.1 COG0772 Bacterial cell division membrane protein YP_005392634.1 COG1770 Protease II YP_005392635.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005392636.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005392638.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005392639.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005392640.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005392641.1 COG3504 Type IV secretory pathway, VirB9 components YP_005392642.1 COG3736 Type IV secretory pathway, component VirB8 YP_005392644.1 COG3736 Type IV secretory pathway, component VirB8 YP_005392645.1 COG3504 Type IV secretory pathway, VirB9 components YP_005392646.1 COG2948 Type IV secretory pathway, VirB10 components YP_005392647.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005392648.1 COG3505 Type IV secretory pathway, VirD4 components YP_005392649.1 COG0248 Exopolyphosphatase YP_005392656.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005392657.1 COG0249 Mismatch repair ATPase (MutS family) YP_005392658.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005392659.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005392660.1 COG1451 Predicted metal-dependent hydrolase YP_005392661.1 COG1351 Predicted alternative thymidylate synthase YP_005392662.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005392663.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005392664.1 COG3175 Cytochrome oxidase assembly factor YP_005392665.1 COG0457 FOG: TPR repeat YP_005392666.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005392667.1 COG0531 Amino acid transporters YP_005392668.1 COG0124 Histidyl-tRNA synthetase YP_005392669.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005392670.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005392672.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_005392674.1 COG0811 Biopolymer transport proteins YP_005392675.1 COG0848 Biopolymer transport protein YP_005392678.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005392679.1 COG0477 Permeases of the major facilitator superfamily YP_005392680.1 COG0845 Membrane-fusion protein YP_005392681.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005392682.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005392683.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005392686.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005392687.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005392691.1 COG0763 Lipid A disaccharide synthetase YP_005392693.1 COG1559 Predicted periplasmic solute-binding protein YP_005392694.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005392700.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005392701.1 COG0550 Topoisomerase IA YP_005392702.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005392703.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005392705.1 COG0450 Peroxiredoxin YP_005392706.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005392708.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005392709.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005392710.1 COG3093 Plasmid maintenance system antidote protein. Potential operon component. YP_005392711.1 Potential operon component. YP_005392712.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005392713.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005392714.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005392716.1 COG0500 SAM-dependent methyltransferases YP_005392717.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005392718.1 COG0845 Membrane-fusion protein YP_005392720.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005392721.1 COG0438 Glycosyltransferase YP_005392724.1 COG0522 Ribosomal protein S4 and related proteins YP_005392725.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005392726.1 COG1533 DNA repair photolyase YP_005392728.1 COG0457 FOG: TPR repeat YP_005392729.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005392730.1 COG0806 RimM protein, required for 16S rRNA processing YP_005392732.1 COG1722 Exonuclease VII small subunit YP_005392734.1 COG2094 3-methyladenine DNA glycosylase YP_005392736.1 COG0759 Uncharacterized conserved protein YP_005392737.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005392738.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005392739.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005392740.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005392741.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005392742.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005392743.1 COG4765 Uncharacterized protein conserved in bacteria YP_005392744.1 COG4974 Site-specific recombinase XerD YP_005392747.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005392748.1 COG0815 Apolipoprotein N-acyltransferase YP_005392750.1 COG3023 Negative regulator of beta-lactamase expression YP_005392751.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005392752.1 COG4120 ABC-type uncharacterized transport system, permease component YP_005392753.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_005392755.1 COG0666 FOG: Ankyrin repeat YP_005392756.1 COG0666 FOG: Ankyrin repeat YP_005392760.1 COG1495 Disulfide bond formation protein DsbB YP_005392761.1 COG1384 Lysyl-tRNA synthetase (class I) YP_005392762.1 COG0679 Predicted permeases YP_005392763.1 COG0281 Malic enzyme YP_005392765.1 COG4374 Uncharacterized protein conserved in bacteria YP_005392766.1 COG2002 Regulators of stationary/sporulation gene expression YP_005392767.1 COG0477 Permeases of the major facilitator superfamily YP_005392774.1 COG0039 Malate/lactate dehydrogenases YP_005392778.1 COG3202 ATP/ADP translocase YP_005392779.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005392780.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005392781.1 COG5304 Uncharacterized protein conserved in bacteria YP_005392782.1 COG1051 ADP-ribose pyrophosphatase YP_005392784.1 COG0302 GTP cyclohydrolase I YP_005392785.1 COG0442 Prolyl-tRNA synthetase YP_005392786.1 COG3177 Uncharacterized conserved protein YP_005392788.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005392790.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005392791.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005392792.1 COG0477 Permeases of the major facilitator superfamily YP_005392793.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005392794.1 COG0797 Lipoproteins YP_005392795.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005392796.1 COG2917 Intracellular septation protein A YP_005392797.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005392799.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005392800.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_005392801.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005392802.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005392803.1 COG0756 dUTPase YP_005392804.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005392806.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005392807.1 COG2887 RecB family exonuclease YP_005392809.1 COG2071 Predicted glutamine amidotransferases YP_005392810.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005392811.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005392812.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005392813.1 COG0615 Cytidylyltransferase YP_005392814.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005392815.1 COG0597 Lipoprotein signal peptidase YP_005392817.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005392818.1 COG0772 Bacterial cell division membrane protein YP_005392819.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005392824.1 COG0841 Cation/multidrug efflux pump YP_005392825.1 COG0841 Cation/multidrug efflux pump YP_005392826.1 COG0841 Cation/multidrug efflux pump YP_005392827.1 COG0841 Cation/multidrug efflux pump YP_005392828.1 COG0841 Cation/multidrug efflux pump YP_005392829.1 COG0845 Membrane-fusion protein YP_005392830.1 COG0438 Glycosyltransferase YP_005392832.1 COG0253 Diaminopimelate epimerase YP_005392833.1 COG0621 2-methylthioadenine synthetase YP_005392834.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005392835.1 COG0073 EMAP domain YP_005392836.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005392840.1 COG0495 Leucyl-tRNA synthetase YP_005392843.1 COG0349 Ribonuclease D YP_005392844.1 COG2919 Septum formation initiator YP_005392845.1 COG0575 CDP-diglyceride synthetase YP_005392846.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005392847.1 COG0642 Signal transduction histidine kinase YP_005392848.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005392849.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005392850.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005392851.1 COG0691 tmRNA-binding protein YP_005392852.1 COG1651 Protein-disulfide isomerase YP_005392853.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005392854.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005392855.1 contains PIN domain; COG5611 Predicted nucleic-acid-binding protein, contains PIN domain YP_005392856.1 COG2002 Regulators of stationary/sporulation gene expression YP_005392857.1 COG3038 Cytochrome B561 YP_005392859.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005392860.1 COG4395 Uncharacterized protein conserved in bacteria YP_005392861.1 COG0605 Superoxide dismutase YP_005392862.1 COG1835 Predicted acyltransferases YP_005392863.1 COG0858 Ribosome-binding factor A YP_005392864.1 COG1238 Predicted membrane protein YP_005392865.1 COG1714 Predicted membrane protein/domain YP_005392866.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005392869.1 COG0061 Predicted sugar kinase YP_005392870.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005392871.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005392872.1 COG0679 Predicted permeases YP_005392873.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005392874.1 COG0492 Thioredoxin reductase YP_005392875.1 COG0447 Dihydroxynaphthoic acid synthase YP_005392878.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005392879.1 COG0210 Superfamily I DNA and RNA helicases YP_005392883.1 COG1171 Threonine dehydratase YP_005392884.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005392889.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005392890.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_005392891.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005392892.1 COG0492 Thioredoxin reductase YP_005392894.1 COG5430 Uncharacterized secreted protein YP_005392896.1 COG3397 Uncharacterized protein conserved in bacteria YP_005392897.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005392898.1 COG0208 Ribonucleotide reductase, beta subunit YP_005392899.1 COG1357 Uncharacterized low-complexity proteins YP_005392901.1 COG0516 IMP dehydrogenase/GMP reductase YP_005392902.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005392903.1 COG1109 Phosphomannomutase YP_005392905.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005392906.1 COG1934 Uncharacterized protein conserved in bacteria YP_005392907.1 COG5375 Uncharacterized protein conserved in bacteria YP_005392908.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005392909.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005392910.1 COG0184 Ribosomal protein S15P/S13E YP_005392911.1 COG0130 Pseudouridine synthase YP_005392912.1 COG3202 ATP/ADP translocase YP_005392914.1 COG1396 Predicted transcriptional regulators YP_005392915.1 COG1295 Predicted membrane protein YP_005392916.1 COG0174 Glutamine synthetase YP_005392917.1 COG1496 Uncharacterized conserved protein YP_005392918.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005392919.1 COG4113 Predicted nucleic acid-binding protein, contains PIN domain YP_005392920.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005392923.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005392924.1 COG0625 Glutathione S-transferase YP_005392925.1 COG4285 Uncharacterized conserved protein YP_005392926.1 COG1268 Uncharacterized conserved protein YP_005392927.1 COG0285 Folylpolyglutamate synthase YP_005392928.1 COG0605 Superoxide dismutase YP_005392929.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005392931.1 COG5448 Uncharacterized conserved protein YP_005392933.1 COG5449 Uncharacterized conserved protein YP_005392935.1 COG5346 Predicted membrane protein YP_005392936.1 COG0290 Translation initiation factor 3 (IF-3) YP_005392937.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005392938.1 COG0216 Protein chain release factor A YP_005392939.1 COG0608 Single-stranded DNA-specific exonuclease YP_005392940.1 COG0500 SAM-dependent methyltransferases YP_005392941.1 COG1158 Transcription termination factor YP_005392942.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005392943.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005392946.1 COG3022 Uncharacterized protein conserved in bacteria YP_005392948.1 COG0283 Cytidylate kinase YP_005392949.1 COG0539 Ribosomal protein S1 YP_005392950.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005392951.1 COG0338 Site-specific DNA methylase YP_005392952.1 COG0642 Signal transduction histidine kinase YP_005392953.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005392954.1 COG0457 FOG: TPR repeat YP_005392955.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005392957.1 COG3328 Transposase and inactivated derivatives YP_005392958.1 COG3344 Retron-type reverse transcriptase YP_005392960.1 COG3344 Retron-type reverse transcriptase YP_005392961.1 COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member YP_005392963.1 COG3505 Type IV secretory pathway, VirD4 components YP_005392966.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005392969.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005392971.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005392972.1 COG5628 Predicted acetyltransferase YP_005392974.1 COG4804 Uncharacterized conserved protein YP_005392980.1 COG1959 Predicted transcriptional regulator YP_005392981.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005392982.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005392983.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005392984.1 COG0316 Uncharacterized conserved protein YP_005392987.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005392988.1 COG0531 Amino acid transporters YP_005392989.1 COG0006 Xaa-Pro aminopeptidase YP_005392990.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005392992.1 COG3202 ATP/ADP translocase YP_005392995.1 COG5464 Uncharacterized conserved protein YP_005392996.1 COG0477 Permeases of the major facilitator superfamily YP_005392997.1 COG1279 Lysine efflux permease YP_005392998.1 COG1587 Uroporphyrinogen-III synthase YP_005393000.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005393001.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_005393002.1 COG3077 DNA-damage-inducible protein J YP_005393003.1 COG5622 Protein required for attachment to host cells YP_005393004.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005393005.1 COG0180 Tryptophanyl-tRNA synthetase YP_005393007.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005393009.1 COG0181 Porphobilinogen deaminase YP_005393010.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005393011.1 COG0591 Na+/proline symporter YP_005393014.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005393015.1 COG1723 Uncharacterized conserved protein YP_005393016.1 COG0349 Ribonuclease D YP_005393018.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005393019.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005393020.1 COG0500 SAM-dependent methyltransferases YP_005393022.1 COG0338 Site-specific DNA methylase YP_005393024.1 COG3676 Transposase and inactivated derivatives YP_005393026.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005393030.1 COG0217 Uncharacterized conserved protein YP_005393031.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005393036.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005393042.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005393044.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005393045.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005393046.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005393049.1 COG0305 Replicative DNA helicase YP_005393051.1 COG0814 Amino acid permeases YP_005393052.1 COG0814 Amino acid permeases YP_005393054.1 COG0814 Amino acid permeases YP_005393055.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005393056.1 COG1357 Uncharacterized low-complexity proteins YP_005393057.1 COG0742 N6-adenine-specific methylase YP_005393058.1 COG1066 Predicted ATP-dependent serine protease YP_005393059.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005393060.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005393062.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005393064.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005393065.1 COG0195 Transcription elongation factor YP_005393066.1 COG0779 Uncharacterized protein conserved in bacteria YP_005393069.1 COG1959 Predicted transcriptional regulator YP_005393070.1 COG1189 Predicted rRNA methylase YP_005393071.1 COG0162 Tyrosyl-tRNA synthetase YP_005393073.1 COG5304 Uncharacterized protein conserved in bacteria YP_005393074.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005393076.1 COG3547 Transposase and inactivated derivatives YP_005393081.1 COG0477 Permeases of the major facilitator superfamily YP_005393083.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005393084.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_005393091.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005393092.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005393093.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005393094.1 COG1357 Uncharacterized low-complexity proteins YP_005393096.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005393099.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005393101.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005393102.1 COG2001 Uncharacterized protein conserved in bacteria YP_005393103.1 COG0666 FOG: Ankyrin repeat YP_005393104.1 COG0591 Na+/proline symporter YP_005393106.1 COG0322 Nuclease subunit of the excinuclease complex YP_005393107.1 COG2847 Uncharacterized protein conserved in bacteria YP_005393108.1 COG4912 Predicted DNA alkylation repair enzyme YP_005393110.1 COG2169 Adenosine deaminase. Potential operon component. YP_005393111.1 COG2169 Adenosine deaminase. Potential operon component. YP_005393112.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005393117.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005393122.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005393123.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005393124.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005393125.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005393126.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005393127.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005393128.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005393129.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005393131.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005393133.1 COG0477 Permeases of the major facilitator superfamily YP_005393136.1 COG1862 Preprotein translocase subunit YajC YP_005393137.1 COG0342 Preprotein translocase subunit SecD YP_005393138.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005393139.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005393140.1 COG0221 Inorganic pyrophosphatase YP_005393141.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005393144.1 COG1200 RecG-like helicase YP_005393145.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005393146.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005393147.1 COG0655 Multimeric flavodoxin WrbA. Potential operon component. YP_005393148.1 COG0655 Multimeric flavodoxin WrbA. Potential operon component. YP_005393150.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005393151.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005393152.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005393153.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005393154.1 COG2938 Uncharacterized conserved protein YP_005393155.1 COG0607 Rhodanese-related sulfurtransferase YP_005393156.1 COG0593 ATPase involved in DNA replication initiation YP_005393160.1 COG3621 Patatin YP_005393163.1 COG0477 Permeases of the major facilitator superfamily YP_005393164.1 COG1708 Predicted nucleotidyltransferases YP_005393165.1 COG0012 Predicted GTPase, probable translation factor YP_005393166.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005393168.1 COG0193 Peptidyl-tRNA hydrolase YP_005393169.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005393170.1 COG0602 Organic radical activating enzymes YP_005393171.1 COG0291 Ribosomal protein L35 YP_005393172.1 COG0292 Ribosomal protein L20 YP_005393173.1 COG0230 Ribosomal protein L34 YP_005393175.1 COG0666 FOG: Ankyrin repeat YP_005393180.1 COG0598 Mg2+ and Co2+ transporters YP_005393183.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005393184.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005393185.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005393186.1 COG0828 Ribosomal protein S21 YP_005393187.1 COG5590 Uncharacterized conserved protein YP_005393190.1 COG0060 Isoleucyl-tRNA synthetase YP_005393193.1 COG0666 FOG: Ankyrin repeat YP_005393194.1 COG0457 FOG: TPR repeat YP_005393196.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_005393197.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005393199.1 COG0477 Permeases of the major facilitator superfamily YP_005393200.1 COG3070 Regulator of competence-specific genes YP_005393201.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005393202.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005393203.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005393204.1 COG5342 Invasion protein B, involved in pathogenesis. Potential operon component. YP_005393205.1 COG0234 Co-chaperonin GroES (HSP10) YP_005393210.1 COG0689 RNase PH YP_005393211.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005393212.1 COG0628 Predicted permease YP_005393213.1 COG0593 ATPase involved in DNA replication initiation YP_005393214.1 COG0477 Permeases of the major facilitator superfamily YP_005393215.1 COG0477 Permeases of the major facilitator superfamily YP_005393222.1 COG0268 Ribosomal protein S20 YP_005393223.1 COG0203 Ribosomal protein L17 YP_005393224.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005393225.1 COG0100 Ribosomal protein S11 YP_005393226.1 COG0099 Ribosomal protein S13 YP_005393227.1 COG0563 Adenylate kinase and related kinases YP_005393228.1 COG0201 Preprotein translocase subunit SecY YP_005393229.1 COG0200 Ribosomal protein L15 YP_005393230.1 COG1841 Ribosomal protein L30/L7E YP_005393231.1 COG0098 Ribosomal protein S5 YP_005393232.1 COG0256 Ribosomal protein L18 YP_005393233.1 COG0097 Ribosomal protein L6P/L9E YP_005393234.1 COG0096 Ribosomal protein S8 YP_005393235.1 COG0199 Ribosomal protein S14 YP_005393236.1 COG0094 Ribosomal protein L5 YP_005393237.1 COG0198 Ribosomal protein L24 YP_005393238.1 COG0093 Ribosomal protein L14 YP_005393239.1 COG0186 Ribosomal protein S17 YP_005393240.1 COG0255 Ribosomal protein L29 YP_005393241.1 COG0197 Ribosomal protein L16/L10E YP_005393242.1 COG0092 Ribosomal protein S3 YP_005393243.1 COG0091 Ribosomal protein L22 YP_005393244.1 COG0185 Ribosomal protein S19 YP_005393245.1 COG0090 Ribosomal protein L2 YP_005393246.1 COG0089 Ribosomal protein L23 YP_005393247.1 COG0088 Ribosomal protein L4 YP_005393248.1 COG0087 Ribosomal protein L3 YP_005393249.1 COG0051 Ribosomal protein S10 YP_005393251.1 COG0050 GTPases - translation elongation factors YP_005393252.1 COG0566 rRNA methylases YP_005393254.1 COG0114 Fumarase YP_005393255.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_005393257.1 COG0206 Cell division GTPase YP_005393258.1 COG4574 Serine protease inhibitor ecotin YP_005393259.1 COG0694 Thioredoxin-like proteins and domains YP_005393260.1 COG0477 Permeases of the major facilitator superfamily YP_005393261.1 COG0513 Superfamily II DNA and RNA helicases YP_005393262.1 COG1278 Cold shock proteins YP_005393264.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005393265.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005393266.1 COG1452 Organic solvent tolerance protein OstA YP_005393267.1 COG1570 Exonuclease VII, large subunit YP_005393270.1 COG0708 Exonuclease III YP_005393271.1 COG4095 Uncharacterized conserved protein YP_005393272.1 COG1160 Predicted GTPases YP_005393273.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005393276.1 COG0661 Predicted unusual protein kinase YP_005393277.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005393278.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005393279.1 COG0836 Mannose-1-phosphate guanylyltransferase. YP_005393282.1 COG2958 Uncharacterized protein conserved in bacteria YP_005393286.1 COG0084 Mg-dependent DNase YP_005393287.1 COG0143 Methionyl-tRNA synthetase YP_005393288.1 COG0125 Thymidylate kinase YP_005393289.1 COG0477 Permeases of the major facilitator superfamily YP_005393290.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005393291.1 COG0525 Valyl-tRNA synthetase YP_005393292.1 COG3475 LPS biosynthesis protein YP_005393293.1 COG1322 Uncharacterized protein conserved in bacteria YP_005393296.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005393297.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_005393300.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005393301.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005393302.1 COG0603 Predicted PP-loop superfamily ATPase YP_005393303.1 COG1598 Uncharacterized conserved protein YP_005393305.1 COG1132 ABC-type multidrug transport system, ATPase and permease components. Potentially inactive due to overlap with tRNA YP_005393307.1 COG0477 Permeases of the major facilitator superfamily YP_005393308.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005393309.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005393311.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005393312.1 COG1138 Cytochrome c biogenesis factor YP_005393315.1 COG0457 FOG: TPR repeat YP_005393318.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005393319.1 COG1472 Beta-glucosidase-related glycosidases YP_005393320.1 COG0789 Predicted transcriptional regulators YP_005393321.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005393323.1 COG1225 Peroxiredoxin YP_005393324.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005393325.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005393326.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005393327.1 COG2961 Protein involved in catabolism of external DNA YP_005393328.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005393329.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005393330.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005393331.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005393335.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005393336.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_005393337.1 COG0328 Ribonuclease HI YP_005393338.1 COG3814 Uncharacterized protein conserved in bacteria YP_005393339.1 COG3494 Uncharacterized protein conserved in bacteria YP_005393340.1 COG0237 Dephospho-CoA kinase YP_005393341.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005393342.1 COG3346 Uncharacterized conserved protein YP_005393343.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005393345.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005393348.1 COG4992 Ornithine/acetylornithine aminotransferase YP_005393351.1 COG0666 FOG: Ankyrin repeat YP_005393360.1 COG0183 Acetyl-CoA acetyltransferase YP_005393362.1 COG3202 ATP/ADP translocase YP_005393363.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005393366.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005393367.1 COG0319 Predicted metal-dependent hydrolase YP_005393369.1 COG0320 Lipoate synthase YP_005393370.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005393371.1 COG0400 Predicted esterase YP_005393372.1 COG0278 Glutaredoxin-related protein YP_005393373.1 COG0177 Predicted EndoIII-related endonuclease YP_005393378.1 COG0313 Predicted methyltransferases YP_005393379.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005393380.1 COG1826 Sec-independent protein secretion pathway components YP_005393381.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005393382.1 COG0261 Ribosomal protein L21 YP_005393383.1 COG0211 Ribosomal protein L27 YP_005393384.1 COG0527 Aspartokinases YP_005393385.1 COG1396 Predicted transcriptional regulators YP_005393386.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005393388.1 COG0477 Permeases of the major facilitator superfamily YP_005393389.1 COG3027 Uncharacterized protein conserved in bacteria YP_005393391.1 COG1426 Uncharacterized protein conserved in bacteria YP_005393392.1 COG2902 NAD-specific glutamate dehydrogenase YP_005393393.1 COG0486 Predicted GTPase YP_005393395.1 COG0477 Permeases of the major facilitator superfamily YP_005393396.1 COG0477 Permeases of the major facilitator superfamily YP_005393398.1 COG0477 Permeases of the major facilitator superfamily YP_005393399.1 COG0468 RecA/RadA recombinase YP_005393400.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005393401.1 COG0236 Acyl carrier protein YP_005393402.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005393403.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005393405.1 COG0194 Guanylate kinase YP_005393406.1 COG1396 Predicted transcriptional regulators YP_005393407.1 COG1792 Cell shape-determining protein YP_005393408.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005393409.1 COG0795 Predicted permeases YP_005393410.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005393412.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005393413.1 COG0333 Ribosomal protein L32 YP_005393414.1 COG2913 Small protein A (tmRNA-binding) YP_005393415.1 COG0552 Signal recognition particle GTPase YP_005393416.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005393420.1 COG0587 DNA polymerase III, alpha subunit YP_005393421.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005393423.1 COG0477 Permeases of the major facilitator superfamily YP_005393424.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005393425.1 COG0172 Seryl-tRNA synthetase YP_005393427.1 COG3451 Type IV secretory pathway, VirB4 components YP_005393429.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005393430.1 COG3637 Opacity protein and related surface antigens YP_005393431.1 COG0500 SAM-dependent methyltransferases YP_005393432.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_005393433.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005393434.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005393435.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005393436.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005393437.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005393438.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005393439.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005393440.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005393441.1 COG3671 Predicted membrane protein YP_005393442.1 COG1048 Aconitase A YP_005393443.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005393444.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005393445.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005393446.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005393447.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005393448.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005393449.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005393450.1 COG2602 Beta-lactamase class D YP_005393451.1 COG2602 Beta-lactamase class D YP_005393452.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005393453.1 COG0621 2-methylthioadenine synthetase YP_005393459.1 COG3807 Uncharacterized protein conserved in bacteria YP_005393460.1 COG0475 Kef-type K+ transport systems, membrane components YP_005393461.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005393462.1 COG0271 Stress-induced morphogen (activity unknown) YP_005393470.1 COG0361 Translation initiation factor 1 (IF-1) YP_005393471.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005393472.1 COG1734 DnaK suppressor protein YP_005393473.1 COG0582 Integrase YP_005393475.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005393476.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005393477.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005393478.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005393480.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005393481.1 COG1835 Predicted acyltransferases YP_005393482.1 COG0024 Methionine aminopeptidase YP_005393483.1 COG2003 DNA repair proteins YP_005393484.1 COG2003 DNA repair proteins YP_005393485.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005393487.1 COG3637 Opacity protein and related surface antigens YP_005393488.1 COG3637 Opacity protein and related surface antigens YP_005393489.1 COG1146 Ferredoxin YP_005393490.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005393491.1 COG0590 Cytosine/adenosine deaminases YP_005393492.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005393493.1 COG4520 Surface antigen YP_005393494.1 COG1881 Phospholipid-binding protein YP_005393495.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005393500.1 COG0178 Excinuclease ATPase subunit YP_005393501.1 COG0629 Single-stranded DNA-binding protein YP_005393504.1 COG3772 Phage-related lysozyme (muraminidase) YP_005393505.1 COG1872 Uncharacterized conserved protein YP_005393506.1 COG0326 Molecular chaperone, HSP90 family YP_005393507.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005393509.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005393510.1 COG0536 Predicted GTPase YP_005393511.1 COG0372 Citrate synthase YP_005393514.1 COG1573 Uracil-DNA glycosylase YP_005393515.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005393518.1 COG1061 DNA or RNA helicases of superfamily II YP_005393520.1 COG2890 Methylase of polypeptide chain release factors YP_005393521.1 COG0009 Putative translation factor (SUA5) YP_005393522.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005393523.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005393524.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005393525.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005393526.1 COG1636 Uncharacterized protein conserved in bacteria YP_005393528.1 COG1474 Cdc6-related protein, AAA superfamily ATPase YP_005393530.1 COG0013 Alanyl-tRNA synthetase YP_005393531.1 COG0101 Pseudouridylate synthase YP_005393532.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005393533.1 COG0358 DNA primase (bacterial type) YP_005393534.1 COG0170 Dolichol kinase YP_005393535.1 COG0782 Transcription elongation factor YP_005393536.1 COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon component. YP_005393537.1 COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon component. YP_005393538.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005393539.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005393540.1 COG0718 Uncharacterized protein conserved in bacteria YP_005393543.1 COG3577 Predicted aspartyl protease YP_005393548.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005393549.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005393550.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005393551.1 COG0671 Membrane-associated phospholipid phosphatase YP_005393552.1 COG3077 DNA-damage-inducible protein J YP_005393553.1 COG3041 Uncharacterized protein conserved in bacteria YP_005393554.1 COG0795 Predicted permeases YP_005393555.1 COG2927 DNA polymerase III, chi subunit YP_005393556.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005393557.1 COG0732 Restriction endonuclease S subunits YP_005393559.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005393560.1 COG3004 Na+/H+ antiporter YP_005393561.1 COG1434 Uncharacterized conserved protein YP_005393562.1 COG0321 Lipoate-protein ligase B YP_005393563.1 COG3023 Negative regulator of beta-lactamase expression YP_005393564.1 COG0228 Ribosomal protein S16 YP_005393565.1 COG0267 Ribosomal protein L33 YP_005393566.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005393567.1 COG4391 Uncharacterized protein conserved in bacteria YP_005393568.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005393569.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005393570.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005393571.1 COG0477 Permeases of the major facilitator superfamily YP_005393572.1 COG0408 Coproporphyrinogen III oxidase