-- dump date 20120504_160524 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1105108000001 SEQ_END SEQ_END NC_017044.1 1300386 1300386 DR NC_017044.1; contig end 1300386..1300386 Rickettsia parkeri str. Portsmouth YP_005392255.1 CDS MC1_00005 NC_017044.1 222 659 R COG1981 Predicted membrane protein; hypothetical protein complement(222..659) Rickettsia parkeri str. Portsmouth 11994595 YP_005392256.1 CDS hemH NC_017044.1 671 1711 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(671..1711) Rickettsia parkeri str. Portsmouth 11994597 YP_005392257.1 CDS hemE NC_017044.1 1668 2708 R COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase complement(1668..2708) Rickettsia parkeri str. Portsmouth 11994610 YP_005392258.1 CDS MC1_00020 NC_017044.1 3104 3925 D COG1806 Uncharacterized protein conserved in bacteria; PEP synthetase regulatory protein 3104..3925 Rickettsia parkeri str. Portsmouth 11994654 YP_005392259.1 CDS MC1_00025 NC_017044.1 4143 4460 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 4143..4460 Rickettsia parkeri str. Portsmouth 11994699 YP_005392260.1 CDS MC1_00030 NC_017044.1 4471 5220 D COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; O-antigen export system ATP-binding protein RfbE 4471..5220 Rickettsia parkeri str. Portsmouth 11994763 YP_005392261.1 CDS MC1_00035 NC_017044.1 5221 5997 D COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; O-antigen export system permease RfbA 5221..5997 Rickettsia parkeri str. Portsmouth 11994825 YP_005392262.1 CDS MC1_00040 NC_017044.1 5994 9095 D COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 5994..9095 Rickettsia parkeri str. Portsmouth 11994862 YP_005392263.1 CDS MC1_00045 NC_017044.1 9139 9378 R COG2337 Growth inhibitor; hypothetical protein complement(9139..9378) Rickettsia parkeri str. Portsmouth 11994915 YP_005392264.1 CDS MC1_00050 NC_017044.1 9403 9660 R COG0506 Proline dehydrogenase; hypothetical protein complement(9403..9660) Rickettsia parkeri str. Portsmouth 11995574 YP_005392265.1 CDS MC1_00055 NC_017044.1 9723 10517 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(9723..10517) Rickettsia parkeri str. Portsmouth 11995575 YP_005392266.1 CDS fabZ NC_017044.1 10525 10962 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(10525..10962) Rickettsia parkeri str. Portsmouth 11995576 YP_005392267.1 CDS lpxD NC_017044.1 11158 12198 R COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(11158..12198) Rickettsia parkeri str. Portsmouth 11995577 YP_005392268.1 CDS MC1_00100 NC_017044.1 15025 15174 D hypothetical protein 15025..15174 Rickettsia parkeri str. Portsmouth 11995579 YP_005392269.1 CDS MC1_00105 NC_017044.1 15182 15709 R COG0802 Predicted ATPase or kinase; Putative P-loop hydrolase complement(15182..15709) Rickettsia parkeri str. Portsmouth 11995580 YP_005392270.1 CDS MC1_00110 NC_017044.1 15697 16506 R COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; zinc/manganese ABC transporter substrate binding protein complement(15697..16506) Rickettsia parkeri str. Portsmouth 11995581 YP_005392271.1 CDS MC1_00115 NC_017044.1 16650 17960 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase complement(16650..17960) Rickettsia parkeri str. Portsmouth 11995582 YP_005392272.1 CDS MC1_00120 NC_017044.1 18470 18694 R hypothetical protein complement(18470..18694) Rickettsia parkeri str. Portsmouth 11995583 YP_005392273.1 CDS MC1_00125 NC_017044.1 18760 19377 R COG0658 Predicted membrane metal-binding protein; DNA translocation competence protein complement(18760..19377) Rickettsia parkeri str. Portsmouth 11995584 YP_005392274.1 CDS MC1_00130 NC_017044.1 19511 19759 R ComEC/Rec2 family protein complement(19511..19759) Rickettsia parkeri str. Portsmouth 11995585 YP_005392275.1 CDS MC1_00135 NC_017044.1 19872 20012 R ComEC/Rec2-like protein complement(19872..20012) Rickettsia parkeri str. Portsmouth 11995586 YP_005392276.1 CDS MC1_00140 NC_017044.1 20400 26135 D cell surface antigen 20400..26135 Rickettsia parkeri str. Portsmouth 11995587 YP_005392277.1 CDS MC1_00145 NC_017044.1 26417 26521 D hypothetical protein 26417..26521 Rickettsia parkeri str. Portsmouth 11995589 YP_005392278.1 CDS MC1_00150 NC_017044.1 26608 26772 D hypothetical protein 26608..26772 Rickettsia parkeri str. Portsmouth 11995590 YP_005392279.1 CDS MC1_00155 NC_017044.1 27481 28107 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; hypothetical protein 27481..28107 Rickettsia parkeri str. Portsmouth 11995591 YP_005392280.1 CDS MC1_00160 NC_017044.1 28187 28306 D hypothetical protein 28187..28306 Rickettsia parkeri str. Portsmouth 11995592 YP_005392281.1 CDS MC1_00175 NC_017044.1 29309 29803 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(29309..29803) Rickettsia parkeri str. Portsmouth 11995593 YP_005392282.1 CDS MC1_00180 NC_017044.1 29803 30276 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' complement(29803..30276) Rickettsia parkeri str. Portsmouth 11995594 YP_005392283.1 CDS MC1_00185 NC_017044.1 30295 30519 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(30295..30519) Rickettsia parkeri str. Portsmouth 11995595 YP_005392284.1 CDS MC1_00190 NC_017044.1 30580 30723 D Ribose-phosphate pyrophosphokinase 30580..30723 Rickettsia parkeri str. Portsmouth 11995596 YP_005392285.1 CDS MC1_00195 NC_017044.1 30715 31443 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(30715..31443) Rickettsia parkeri str. Portsmouth 11995597 YP_005392286.1 CDS MC1_00200 NC_017044.1 31448 31711 R COG5336 Uncharacterized protein conserved in bacteria; hypothetical protein complement(31448..31711) Rickettsia parkeri str. Portsmouth 11995598 YP_005392287.1 CDS MC1_00205 NC_017044.1 31822 32655 R COG1651 Protein-disulfide isomerase; protein-disulfide isomerase complement(31822..32655) Rickettsia parkeri str. Portsmouth 11995599 YP_005392288.1 CDS MC1_00210 NC_017044.1 32819 33340 D COG1329 Transcriptional regulators, similar to M. xanthus CarD; transcriptional regulator 32819..33340 Rickettsia parkeri str. Portsmouth 11995600 YP_005392289.1 CDS MC1_00215 NC_017044.1 33351 33482 R Periplasmic divalent cation tolerance protein complement(33351..33482) Rickettsia parkeri str. Portsmouth 11995601 YP_005392290.1 CDS MC1_00220 NC_017044.1 33587 35191 R COG0500 SAM-dependent methyltransferases; Putative methyltransferase complement(33587..35191) Rickettsia parkeri str. Portsmouth 11995602 YP_005392291.1 CDS MC1_00225 NC_017044.1 35310 35528 D hypothetical protein 35310..35528 Rickettsia parkeri str. Portsmouth 11995603 YP_005392292.1 CDS recF NC_017044.1 35617 36699 R COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F complement(35617..36699) Rickettsia parkeri str. Portsmouth 11995604 YP_005392293.1 CDS MC1_00235 NC_017044.1 36723 37025 R COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C; coenzyme PQQ synthesis protein c complement(36723..37025) Rickettsia parkeri str. Portsmouth 11995605 YP_005392294.1 CDS MC1_00240 NC_017044.1 37366 37860 R COG0262 Dihydrofolate reductase; Dihydrofolate reductase complement(37366..37860) Rickettsia parkeri str. Portsmouth 11995606 YP_005392295.1 CDS MC1_00245 NC_017044.1 37857 38117 R COG0294 Dihydropteroate synthase and related enzymes. Potential operon component.; folate synthesis bifunctional protein complement(37857..38117) Rickettsia parkeri str. Portsmouth 11995607 YP_005392296.1 CDS MC1_00250 NC_017044.1 38074 38343 R COG0294 Dihydropteroate synthase and related enzymes. Potential operon component.; folate synthesis bifunctional protein complement(38074..38343) Rickettsia parkeri str. Portsmouth 11995608 YP_005392297.1 CDS MC1_00255 NC_017044.1 38534 38938 R COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. Potential operon component.; folate synthesis bifunctional protein complement(38534..38938) Rickettsia parkeri str. Portsmouth 11995609 YP_005392298.1 CDS MC1_00260 NC_017044.1 38935 39153 R COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase. Potential operon component.; folate synthesis bifunctional protein complement(38935..39153) Rickettsia parkeri str. Portsmouth 11995610 YP_005392299.1 CDS MC1_00265 NC_017044.1 39619 40287 R hypothetical protein complement(39619..40287) Rickettsia parkeri str. Portsmouth 11995611 YP_005392300.1 CDS MC1_00270 NC_017044.1 40369 40668 R hypothetical protein complement(40369..40668) Rickettsia parkeri str. Portsmouth 11995612 YP_005392301.1 CDS MC1_00275 NC_017044.1 40836 41231 R hypothetical protein complement(40836..41231) Rickettsia parkeri str. Portsmouth 11995613 YP_005392302.1 CDS MC1_00280 NC_017044.1 41707 41904 R hypothetical protein complement(41707..41904) Rickettsia parkeri str. Portsmouth 11995614 YP_005392303.1 CDS MC1_00285 NC_017044.1 42238 42510 R hypothetical protein complement(42238..42510) Rickettsia parkeri str. Portsmouth 11995615 YP_005392304.1 CDS MC1_00290 NC_017044.1 42851 42949 R hypothetical protein complement(42851..42949) Rickettsia parkeri str. Portsmouth 11995616 YP_005392305.1 CDS MC1_00295 NC_017044.1 43150 43746 D COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; sco2 protein 43150..43746 Rickettsia parkeri str. Portsmouth 11995617 YP_005392306.1 CDS MC1_00300 NC_017044.1 43757 44326 R COG1678 Putative transcriptional regulator; hypothetical protein complement(43757..44326) Rickettsia parkeri str. Portsmouth 11995618 YP_005392307.1 CDS MC1_00305 NC_017044.1 44392 45060 D COG1286 Uncharacterized membrane protein, required for colicin V production; Putative colicin V production membrane protein 44392..45060 Rickettsia parkeri str. Portsmouth 11995619 YP_005392308.1 CDS MC1_00310 NC_017044.1 45625 46515 D hypothetical protein 45625..46515 Rickettsia parkeri str. Portsmouth 11995620 YP_005392309.1 CDS MC1_00315 NC_017044.1 46472 46831 D cell surface antigen-like protein Sca10 46472..46831 Rickettsia parkeri str. Portsmouth 11995621 YP_005392310.1 CDS MC1_00320 NC_017044.1 47095 48417 R hypothetical protein complement(47095..48417) Rickettsia parkeri str. Portsmouth 11995622 YP_005392311.1 CDS MC1_00325 NC_017044.1 48466 48951 R hypothetical protein complement(48466..48951) Rickettsia parkeri str. Portsmouth 11995623 YP_005392312.1 CDS MC1_00330 NC_017044.1 48929 49606 R hypothetical protein complement(48929..49606) Rickettsia parkeri str. Portsmouth 11995624 YP_005392313.1 CDS MC1_00335 NC_017044.1 49752 49949 R hypothetical protein complement(49752..49949) Rickettsia parkeri str. Portsmouth 11995625 YP_005392314.1 CDS MC1_00340 NC_017044.1 50392 51117 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); acetoacetyl-CoA reductase complement(50392..51117) Rickettsia parkeri str. Portsmouth 11995626 YP_005392315.1 CDS MC1_00345 NC_017044.1 51275 51406 R hypothetical protein complement(51275..51406) Rickettsia parkeri str. Portsmouth 11995627 YP_005392316.1 CDS MC1_00350 NC_017044.1 51408 51578 R hypothetical protein complement(51408..51578) Rickettsia parkeri str. Portsmouth 11995628 YP_005392317.1 CDS MC1_00370 NC_017044.1 53148 55721 D COG0542 ATPases with chaperone activity, ATP-binding subunit; chaperone ClpB 53148..55721 Rickettsia parkeri str. Portsmouth 11995629 YP_005392318.1 CDS MC1_00375 NC_017044.1 55905 56396 R hypothetical protein complement(55905..56396) Rickettsia parkeri str. Portsmouth 11995630 YP_005392319.1 CDS MC1_00380 NC_017044.1 56523 57557 R COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein complement(56523..57557) Rickettsia parkeri str. Portsmouth 11995631 YP_005392320.1 CDS MC1_00385 NC_017044.1 57726 58919 R COG1398 Fatty-acid desaturase; Acyl-CoA desaturase 1 complement(57726..58919) Rickettsia parkeri str. Portsmouth 11995632 YP_005392321.1 CDS MC1_00390 NC_017044.1 59147 59377 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator complement(59147..59377) Rickettsia parkeri str. Portsmouth 11995633 YP_005392322.1 CDS rpsF NC_017044.1 59870 60235 D COG0360 Ribosomal protein S6; 30S ribosomal protein S6 59870..60235 Rickettsia parkeri str. Portsmouth 11995634 YP_005392323.1 CDS rpsR NC_017044.1 60260 60547 D COG0238 Ribosomal protein S18; 30S ribosomal protein S18 60260..60547 Rickettsia parkeri str. Portsmouth 11995635 YP_005392324.1 CDS rplI NC_017044.1 60559 61074 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 60559..61074 Rickettsia parkeri str. Portsmouth 11995636 YP_005392325.1 CDS MC1_00410 NC_017044.1 61332 62768 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase 61332..62768 Rickettsia parkeri str. Portsmouth 11995637 YP_005392326.1 CDS MC1_00415 NC_017044.1 62869 64782 D COG0465 ATP-dependent Zn proteases; ATP-dependent metalloprotease FtsH 62869..64782 Rickettsia parkeri str. Portsmouth 11995638 YP_005392327.1 CDS MC1_00420 NC_017044.1 64871 65068 D COG0270 Site-specific DNA methylase. Potential operon component.; Site-specific DNA methylase 64871..65068 Rickettsia parkeri str. Portsmouth 11995639 YP_005392328.1 CDS MC1_00425 NC_017044.1 65056 65193 D COG0270 Site-specific DNA methylase. Potential operon component.; site-specific DNA methylase 65056..65193 Rickettsia parkeri str. Portsmouth 11995640 YP_005392329.1 CDS sdhB NC_017044.1 65689 66474 D COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit 65689..66474 Rickettsia parkeri str. Portsmouth 11995641 YP_005392330.1 CDS MC1_00435 NC_017044.1 66549 66917 D COG3755 Uncharacterized protein conserved in bacteria; hypothetical protein 66549..66917 Rickettsia parkeri str. Portsmouth 11995642 YP_005392331.1 CDS MC1_00440 NC_017044.1 67057 68277 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(67057..68277) Rickettsia parkeri str. Portsmouth 11995643 YP_005392332.1 CDS MC1_00445 NC_017044.1 68256 69035 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(68256..69035) Rickettsia parkeri str. Portsmouth 11995644 YP_005392333.1 CDS MC1_00450 NC_017044.1 69280 70443 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 69280..70443 Rickettsia parkeri str. Portsmouth 11995645 YP_005392334.1 CDS MC1_00455 NC_017044.1 70627 72309 D COG0706 Preprotein translocase subunit YidC; membrane protein insertase 70627..72309 Rickettsia parkeri str. Portsmouth 11995646 YP_005392335.1 CDS MC1_00460 NC_017044.1 72309 72854 D COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 72309..72854 Rickettsia parkeri str. Portsmouth 11995647 YP_005392336.1 CDS MC1_00465 NC_017044.1 73586 73969 R hypothetical protein complement(73586..73969) Rickettsia parkeri str. Portsmouth 11995648 YP_005392337.1 CDS MC1_00470 NC_017044.1 74189 74461 D COG0500 SAM-dependent methyltransferases; Tellurite resistance protein-related protein 74189..74461 Rickettsia parkeri str. Portsmouth 11995649 YP_005392338.1 CDS MC1_00475 NC_017044.1 74574 74831 D tellurite resistance protein-like protein 74574..74831 Rickettsia parkeri str. Portsmouth 11995650 YP_005392339.1 CDS MC1_00480 NC_017044.1 75023 75871 D hypothetical protein 75023..75871 Rickettsia parkeri str. Portsmouth 11995651 YP_005392340.1 CDS MC1_00485 NC_017044.1 75915 76022 D hypothetical protein 75915..76022 Rickettsia parkeri str. Portsmouth 11995652 YP_005392341.1 CDS MC1_00490 NC_017044.1 76089 76763 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(76089..76763) Rickettsia parkeri str. Portsmouth 11995653 YP_005392342.1 CDS MC1_00495 NC_017044.1 76962 78467 D COG3202 ATP/ADP translocase; ATP/ADP translocase 76962..78467 Rickettsia parkeri str. Portsmouth 11995654 YP_005392343.1 CDS MC1_00500 NC_017044.1 78638 79933 D COG2271 Sugar phosphate permease; Sugar phosphate permease 78638..79933 Rickettsia parkeri str. Portsmouth 11995655 YP_005392344.1 CDS ndk NC_017044.1 79958 80380 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 79958..80380 Rickettsia parkeri str. Portsmouth 11995656 YP_005392345.1 CDS MC1_00510 NC_017044.1 80384 82252 D COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 80384..82252 Rickettsia parkeri str. Portsmouth 11995657 YP_005392346.1 CDS gidB NC_017044.1 82233 82811 D COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB 82233..82811 Rickettsia parkeri str. Portsmouth 11995658 YP_005392347.1 CDS MC1_00520 NC_017044.1 82808 83575 D COG1192 ATPases involved in chromosome partitioning; chromosome partitioning ATPase 82808..83575 Rickettsia parkeri str. Portsmouth 11995659 YP_005392348.1 CDS MC1_00525 NC_017044.1 83562 84422 D COG1475 Predicted transcriptional regulators; stage 0 sporulation protein J 83562..84422 Rickettsia parkeri str. Portsmouth 11995660 YP_005392349.1 CDS MC1_00530 NC_017044.1 84681 86348 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; putative ABC transporter ATP-binding protein 84681..86348 Rickettsia parkeri str. Portsmouth 11995661 YP_005392350.1 CDS MC1_00535 NC_017044.1 86351 86668 D hypothetical protein 86351..86668 Rickettsia parkeri str. Portsmouth 11995662 YP_005392351.1 CDS MC1_00540 NC_017044.1 86704 87528 D COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 86704..87528 Rickettsia parkeri str. Portsmouth 11995663 YP_005392352.1 CDS MC1_00545 NC_017044.1 88051 88410 D hypothetical protein 88051..88410 Rickettsia parkeri str. Portsmouth 11995664 YP_005392353.1 CDS MC1_00550 NC_017044.1 88518 88631 D hypothetical protein 88518..88631 Rickettsia parkeri str. Portsmouth 11995665 YP_005392354.1 CDS MC1_00555 NC_017044.1 88965 89297 R COG0316 Uncharacterized conserved protein; Iron-sulfur cluster assembly accessory protein complement(88965..89297) Rickettsia parkeri str. Portsmouth 11995666 YP_005392355.1 CDS MC1_00560 NC_017044.1 89527 90681 D COG0232 dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase-like protein 89527..90681 Rickettsia parkeri str. Portsmouth 11995667 YP_005392356.1 CDS argS NC_017044.1 90831 92561 D COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase 90831..92561 Rickettsia parkeri str. Portsmouth 11995668 YP_005392357.1 CDS MC1_00570 NC_017044.1 92734 93408 D hypothetical protein 92734..93408 Rickettsia parkeri str. Portsmouth 11995669 YP_005392358.1 CDS MC1_00575 NC_017044.1 93586 95802 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A 93586..95802 Rickettsia parkeri str. Portsmouth 11995670 YP_005392359.1 CDS MC1_00580 NC_017044.1 95912 96106 R hypothetical protein complement(95912..96106) Rickettsia parkeri str. Portsmouth 11995671 YP_005392360.1 CDS MC1_00585 NC_017044.1 96498 97814 R hypothetical protein complement(96498..97814) Rickettsia parkeri str. Portsmouth 11995672 YP_005392361.1 CDS dcd NC_017044.1 98099 98665 D COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 98099..98665 Rickettsia parkeri str. Portsmouth 11995673 YP_005392362.1 CDS MC1_00595 NC_017044.1 98711 99169 D COG1952 Preprotein translocase subunit SecB; preprotein translocase subunit SecB 98711..99169 Rickettsia parkeri str. Portsmouth 11995674 YP_005392363.1 CDS MC1_00600 NC_017044.1 99394 100107 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Transcriptional activator protein CzcR 99394..100107 Rickettsia parkeri str. Portsmouth 11995675 YP_005392364.1 CDS queF NC_017044.1 100111 100932 D COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase 100111..100932 Rickettsia parkeri str. Portsmouth 11995676 YP_005392365.1 CDS MC1_00610 NC_017044.1 101173 101733 R COG3820 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein complement(101173..101733) Rickettsia parkeri str. Portsmouth 11995677 YP_005392366.1 CDS MC1_00615 NC_017044.1 101788 103185 R COG1282 NAD/NADP transhydrogenase beta subunit; NAD(p) transhydrogenase subunit beta complement(101788..103185) Rickettsia parkeri str. Portsmouth 11995678 YP_005392367.1 CDS MC1_00620 NC_017044.1 103326 104063 R COG3047 Outer membrane protein W; OmpW family outer-membrane protein complement(103326..104063) Rickettsia parkeri str. Portsmouth 11995679 YP_005392368.1 CDS MC1_00625 NC_017044.1 104218 105102 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; S-adenosylmethionine transporter 104218..105102 Rickettsia parkeri str. Portsmouth 11995680 YP_005392369.1 CDS MC1_00630 NC_017044.1 105089 106375 D COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 105089..106375 Rickettsia parkeri str. Portsmouth 11995681 YP_005392370.1 CDS MC1_00635 NC_017044.1 106625 106837 D hypothetical protein 106625..106837 Rickettsia parkeri str. Portsmouth 11995682 YP_005392371.1 CDS secG NC_017044.1 107178 107480 D preprotein translocase subunit SecG 107178..107480 Rickettsia parkeri str. Portsmouth 11995684 YP_005392372.1 CDS MC1_00645 NC_017044.1 108150 108311 D hypothetical protein 108150..108311 Rickettsia parkeri str. Portsmouth 11995685 YP_005392373.1 CDS MC1_00650 NC_017044.1 108383 113791 R hypothetical protein complement(108383..113791) Rickettsia parkeri str. Portsmouth 11995686 YP_005392374.1 CDS cysS NC_017044.1 114085 115464 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 114085..115464 Rickettsia parkeri str. Portsmouth 11995687 YP_005392375.1 CDS rpsB NC_017044.1 115712 116599 D COG0052 Ribosomal protein S2; 30S ribosomal protein S2 115712..116599 Rickettsia parkeri str. Portsmouth 11995688 YP_005392376.1 CDS tsf NC_017044.1 116796 117725 D COG0264 Translation elongation factor Ts; elongation factor Ts 116796..117725 Rickettsia parkeri str. Portsmouth 11995689 YP_005392377.1 CDS MC1_00680 NC_017044.1 119097 120491 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(119097..120491) Rickettsia parkeri str. Portsmouth 11995690 YP_005392378.1 CDS MC1_00685 NC_017044.1 120488 121144 R COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein complement(120488..121144) Rickettsia parkeri str. Portsmouth 11995691 YP_005392379.1 CDS MC1_00690 NC_017044.1 121295 122500 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase complement(121295..122500) Rickettsia parkeri str. Portsmouth 11995692 YP_005392380.1 CDS MC1_00695 NC_017044.1 123135 124142 D COG0457 FOG: TPR repeat; hypothetical protein 123135..124142 Rickettsia parkeri str. Portsmouth 11995693 YP_005392381.1 CDS MC1_00700 NC_017044.1 124147 124902 D COG2853 Surface lipoprotein; VacJ lipoprotein 124147..124902 Rickettsia parkeri str. Portsmouth 11995694 YP_005392382.1 CDS MC1_00705 NC_017044.1 124922 125521 D COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; ABC-type transporter related to toluene tolerance protein 124922..125521 Rickettsia parkeri str. Portsmouth 11995695 YP_005392383.1 CDS MC1_00710 NC_017044.1 126004 126495 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 126004..126495 Rickettsia parkeri str. Portsmouth 11995696 YP_005392384.1 CDS MC1_00715 NC_017044.1 126467 126691 D hypothetical protein 126467..126691 Rickettsia parkeri str. Portsmouth 11995697 YP_005392385.1 CDS alr NC_017044.1 126758 127825 D COG0787 Alanine racemase; alanine racemase 126758..127825 Rickettsia parkeri str. Portsmouth 11995698 YP_005392386.1 CDS MC1_00725 NC_017044.1 127982 128761 D COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; ABC transporter permease 127982..128761 Rickettsia parkeri str. Portsmouth 11995699 YP_005392387.1 CDS MC1_00730 NC_017044.1 128914 129669 D COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ribonucleotide ABC transporter ATP-binding protein 128914..129669 Rickettsia parkeri str. Portsmouth 11995700 YP_005392388.1 CDS MC1_00735 NC_017044.1 129671 129919 D hypothetical protein 129671..129919 Rickettsia parkeri str. Portsmouth 11995701 YP_005392389.1 CDS MC1_00750 NC_017044.1 130484 130906 R hypothetical protein complement(130484..130906) Rickettsia parkeri str. Portsmouth 11995702 YP_005392390.1 CDS MC1_00765 NC_017044.1 131870 132040 R hypothetical protein complement(131870..132040) Rickettsia parkeri str. Portsmouth 11995703 YP_005392391.1 CDS rpmB NC_017044.1 132361 132654 D COG0227 Ribosomal protein L28; 50S ribosomal protein L28 132361..132654 Rickettsia parkeri str. Portsmouth 11995704 YP_005392392.1 CDS MC1_00775 NC_017044.1 132651 132887 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 132651..132887 Rickettsia parkeri str. Portsmouth 11995705 YP_005392393.1 CDS engB NC_017044.1 133495 134133 D COG0218 Predicted GTPase; GTP-binding protein YsxC 133495..134133 Rickettsia parkeri str. Portsmouth 11995707 YP_005392394.1 CDS MC1_00785 NC_017044.1 134081 135004 D COG0548 Acetylglutamate kinase; acetylglutamate kinase 134081..135004 Rickettsia parkeri str. Portsmouth 11995708 YP_005392395.1 CDS MC1_00790 NC_017044.1 135017 135304 D COG3702 Type IV secretory pathway, VirB3 components; type IV secretion system protein VirB3 135017..135304 Rickettsia parkeri str. Portsmouth 11995709 YP_005392396.1 CDS MC1_00795 NC_017044.1 135394 137811 D COG3451 Type IV secretory pathway, VirB4 components; type IV secretion system ATPase VirB4 135394..137811 Rickettsia parkeri str. Portsmouth 11995710 YP_005392397.1 CDS MC1_00800 NC_017044.1 137929 140910 D COG3704 Type IV secretory pathway, VirB6 components; hypothetical protein 137929..140910 Rickettsia parkeri str. Portsmouth 11995711 YP_005392398.1 CDS MC1_00805 NC_017044.1 140897 142882 D COG3704 Type IV secretory pathway, VirB6 components; VirB6 140897..142882 Rickettsia parkeri str. Portsmouth 11995712 YP_005392399.1 CDS MC1_00810 NC_017044.1 142889 145789 D COG3704 Type IV secretory pathway, VirB6 components; VirB6 142889..145789 Rickettsia parkeri str. Portsmouth 11995713 YP_005392400.1 CDS MC1_00815 NC_017044.1 145963 148638 D COG3704 Type IV secretory pathway, VirB6 components; hypothetical protein 145963..148638 Rickettsia parkeri str. Portsmouth 11995714 YP_005392401.1 CDS MC1_00820 NC_017044.1 148791 152252 D COG3704 Type IV secretory pathway, VirB6 components; VirB6 148791..152252 Rickettsia parkeri str. Portsmouth 11995715 YP_005392402.1 CDS MC1_00825 NC_017044.1 152317 152418 D hypothetical protein 152317..152418 Rickettsia parkeri str. Portsmouth 11995716 YP_005392403.1 CDS MC1_00850 NC_017044.1 155134 155262 D hypothetical protein 155134..155262 Rickettsia parkeri str. Portsmouth 11995717 YP_005392404.1 CDS MC1_00855 NC_017044.1 155262 155405 D hypothetical protein 155262..155405 Rickettsia parkeri str. Portsmouth 11995718 YP_005392405.1 CDS trmD NC_017044.1 155609 156313 D COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 155609..156313 Rickettsia parkeri str. Portsmouth 11995719 YP_005392406.1 CDS rplS NC_017044.1 156331 156747 D COG0335 Ribosomal protein L19; 50S ribosomal protein L19 156331..156747 Rickettsia parkeri str. Portsmouth 11995720 YP_005392407.1 CDS MC1_00870 NC_017044.1 156917 157153 R COG3750 Uncharacterized protein conserved in bacteria; hypothetical protein complement(156917..157153) Rickettsia parkeri str. Portsmouth 11995721 YP_005392408.1 CDS secF NC_017044.1 157226 158152 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 157226..158152 Rickettsia parkeri str. Portsmouth 11995722 YP_005392409.1 CDS MC1_00880 NC_017044.1 158317 159582 D COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase I subunit F 158317..159582 Rickettsia parkeri str. Portsmouth 11995723 YP_005392410.1 CDS MC1_00885 NC_017044.1 159766 160566 D COG0681 Signal peptidase I; signal peptidase I 159766..160566 Rickettsia parkeri str. Portsmouth 11995724 YP_005392411.1 CDS rnc NC_017044.1 160566 161249 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 160566..161249 Rickettsia parkeri str. Portsmouth 11995725 YP_005392412.1 CDS era NC_017044.1 161242 162261 D COG1159 GTPase; GTPase Era 161242..162261 Rickettsia parkeri str. Portsmouth 11995726 YP_005392413.1 CDS ruvC NC_017044.1 162379 162852 D COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 162379..162852 Rickettsia parkeri str. Portsmouth 11995727 YP_005392414.1 CDS MC1_00905 NC_017044.1 162872 163564 D COG0565 rRNA methylase; tRNA/rRNA methyltransferase 162872..163564 Rickettsia parkeri str. Portsmouth 11995728 YP_005392415.1 CDS MC1_00910 NC_017044.1 163545 164129 R nucleotidyltransferase substrate binding protein complement(163545..164129) Rickettsia parkeri str. Portsmouth 11995729 YP_005392416.1 CDS MC1_00915 NC_017044.1 164210 165256 R COG3660 Predicted nucleoside-diphosphate-sugar epimerase; putative nucleoside-diphosphate-sugar epimerase complement(164210..165256) Rickettsia parkeri str. Portsmouth 11995730 YP_005392417.1 CDS MC1_00920 NC_017044.1 165253 166212 R COG0489 ATPases involved in chromosome partitioning; Mrp protein complement(165253..166212) Rickettsia parkeri str. Portsmouth 11995731 YP_005392418.1 CDS MC1_00925 NC_017044.1 166317 167357 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; Protease activity modulator HflK 166317..167357 Rickettsia parkeri str. Portsmouth 11995732 YP_005392419.1 CDS MC1_00930 NC_017044.1 167451 168311 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; Membrane protease subunit, stomatin/prohibitin-like protein 167451..168311 Rickettsia parkeri str. Portsmouth 11995733 YP_005392420.1 CDS MC1_00935 NC_017044.1 168349 169875 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine protease 168349..169875 Rickettsia parkeri str. Portsmouth 11995734 YP_005392421.1 CDS MC1_00940 NC_017044.1 170052 170795 D COG1054 Predicted sulfurtransferase; hypothetical protein 170052..170795 Rickettsia parkeri str. Portsmouth 11995735 YP_005392422.1 CDS MC1_00945 NC_017044.1 170962 171336 D COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b-556 subunit 170962..171336 Rickettsia parkeri str. Portsmouth 11995736 YP_005392423.1 CDS MC1_00950 NC_017044.1 171402 171491 D hypothetical protein 171402..171491 Rickettsia parkeri str. Portsmouth 11995737 YP_005392424.1 CDS MC1_00955 NC_017044.1 171481 171861 D COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase hydrophobic membrane anchor protein 171481..171861 Rickettsia parkeri str. Portsmouth 11995738 YP_005392425.1 CDS sdhA NC_017044.1 171995 173785 D COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit 171995..173785 Rickettsia parkeri str. Portsmouth 11995739 YP_005392426.1 CDS MC1_00965 NC_017044.1 173931 174587 D COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 173931..174587 Rickettsia parkeri str. Portsmouth 11995740 YP_005392427.1 CDS rpsL NC_017044.1 174748 175137 D COG0048 Ribosomal protein S12; 30S ribosomal protein S12 174748..175137 Rickettsia parkeri str. Portsmouth 11995741 YP_005392428.1 CDS MC1_00975 NC_017044.1 175164 175646 D COG0049 Ribosomal protein S7; 30S ribosomal protein S7 175164..175646 Rickettsia parkeri str. Portsmouth 11995742 YP_005392429.1 CDS MC1_00980 NC_017044.1 175658 177757 D COG0480 Translation elongation factors (GTPases); elongation factor G 175658..177757 Rickettsia parkeri str. Portsmouth 11995743 YP_005392430.1 CDS secE NC_017044.1 178179 178379 D COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE 178179..178379 Rickettsia parkeri str. Portsmouth 11995745 YP_005392431.1 CDS nusG NC_017044.1 178395 178973 D COG0250 Transcription antiterminator; transcription antitermination protein NusG 178395..178973 Rickettsia parkeri str. Portsmouth 11995746 YP_005392432.1 CDS rplK NC_017044.1 179245 179682 D COG0080 Ribosomal protein L11; 50S ribosomal protein L11 179245..179682 Rickettsia parkeri str. Portsmouth 11995747 YP_005392433.1 CDS rplA NC_017044.1 179688 180407 D COG0081 Ribosomal protein L1; 50S ribosomal protein L1 179688..180407 Rickettsia parkeri str. Portsmouth 11995748 YP_005392434.1 CDS rplJ NC_017044.1 180518 181027 D COG0244 Ribosomal protein L10; 50S ribosomal protein L10 180518..181027 Rickettsia parkeri str. Portsmouth 11995749 YP_005392435.1 CDS rplL NC_017044.1 181222 181599 D COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 181222..181599 Rickettsia parkeri str. Portsmouth 11995750 YP_005392436.1 CDS rpoB NC_017044.1 182544 186665 D COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta 182544..186665 Rickettsia parkeri str. Portsmouth 11995751 YP_005392437.1 CDS MC1_01020 NC_017044.1 186923 191041 D COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' 186923..191041 Rickettsia parkeri str. Portsmouth 11995752 YP_005392438.1 CDS MC1_01025 NC_017044.1 191446 192615 R hypothetical protein complement(191446..192615) Rickettsia parkeri str. Portsmouth 11995753 YP_005392439.1 CDS MC1_01030 NC_017044.1 192780 194282 D COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 192780..194282 Rickettsia parkeri str. Portsmouth 11995754 YP_005392440.1 CDS MC1_01035 NC_017044.1 194501 195301 D COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein-like protein 194501..195301 Rickettsia parkeri str. Portsmouth 11995755 YP_005392441.1 CDS MC1_01040 NC_017044.1 195384 195818 D hypothetical protein 195384..195818 Rickettsia parkeri str. Portsmouth 11995756 YP_005392442.1 CDS aspS NC_017044.1 195909 197717 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 195909..197717 Rickettsia parkeri str. Portsmouth 11995757 YP_005392443.1 CDS MC1_01050 NC_017044.1 197899 200013 R hypothetical protein complement(197899..200013) Rickettsia parkeri str. Portsmouth 11995758 YP_005392444.1 CDS MC1_01055 NC_017044.1 200385 201095 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(200385..201095) Rickettsia parkeri str. Portsmouth 11995759 YP_005392445.1 CDS MC1_01060 NC_017044.1 201169 201888 R COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(201169..201888) Rickettsia parkeri str. Portsmouth 11995760 YP_005392446.1 CDS MC1_01065 NC_017044.1 202173 202652 R COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; flavoprotein oxygenase DIM6/NTAB family protein complement(202173..202652) Rickettsia parkeri str. Portsmouth 11995761 YP_005392447.1 CDS MC1_01070 NC_017044.1 202637 203362 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter substrate-binding protein complement(202637..203362) Rickettsia parkeri str. Portsmouth 11995762 YP_005392448.1 CDS gatB NC_017044.1 203619 205070 R COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B complement(203619..205070) Rickettsia parkeri str. Portsmouth 11995763 YP_005392449.1 CDS gatA NC_017044.1 205073 206554 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(205073..206554) Rickettsia parkeri str. Portsmouth 11995764 YP_005392450.1 CDS gatC NC_017044.1 206557 206859 R COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(206557..206859) Rickettsia parkeri str. Portsmouth 11995765 YP_005392451.1 CDS MC1_01090 NC_017044.1 207163 207336 R hypothetical protein complement(207163..207336) Rickettsia parkeri str. Portsmouth 11995766 YP_005392452.1 CDS frr NC_017044.1 207651 208211 R COG0233 Ribosome recycling factor; ribosome recycling factor complement(207651..208211) Rickettsia parkeri str. Portsmouth 11995767 YP_005392453.1 CDS pyrH NC_017044.1 208500 209228 R COG0528 Uridylate kinase; uridylate kinase complement(208500..209228) Rickettsia parkeri str. Portsmouth 11995768 YP_005392454.1 CDS MC1_01105 NC_017044.1 209237 209560 R COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit; putative monovalent cation/H+ antiporter subunit E complement(209237..209560) Rickettsia parkeri str. Portsmouth 11995769 YP_005392455.1 CDS MC1_01110 NC_017044.1 209544 211103 R COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein B complement(209544..211103) Rickettsia parkeri str. Portsmouth 11995770 YP_005392456.1 CDS MC1_01115 NC_017044.1 211334 211537 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; hypothetical protein 211334..211537 Rickettsia parkeri str. Portsmouth 11995771 YP_005392457.1 CDS MC1_01120 NC_017044.1 211914 212162 R hypothetical protein complement(211914..212162) Rickettsia parkeri str. Portsmouth 11995772 YP_005392458.1 CDS MC1_01125 NC_017044.1 212164 212700 R hypothetical protein complement(212164..212700) Rickettsia parkeri str. Portsmouth 11995773 YP_005392459.1 CDS MC1_01130 NC_017044.1 213398 215704 R COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein omp1 complement(213398..215704) Rickettsia parkeri str. Portsmouth 11995775 YP_005392460.1 CDS MC1_01135 NC_017044.1 215943 217016 R COG0750 Predicted membrane-associated Zn-dependent proteases 1; M50 family membrane endopeptidase complement(215943..217016) Rickettsia parkeri str. Portsmouth 11995776 YP_005392461.1 CDS nusB NC_017044.1 217202 217672 D COG0781 Transcription termination factor; transcription antitermination protein NusB 217202..217672 Rickettsia parkeri str. Portsmouth 11995777 YP_005392462.1 CDS MC1_01145 NC_017044.1 217807 218490 D COG0293 23S rRNA methylase; Ribosomal RNA large subunit methyltransferase J 217807..218490 Rickettsia parkeri str. Portsmouth 11995778 YP_005392463.1 CDS MC1_01150 NC_017044.1 218541 219602 R hypothetical protein complement(218541..219602) Rickettsia parkeri str. Portsmouth 11995779 YP_005392464.1 CDS MC1_01155 NC_017044.1 219767 220720 D hypothetical protein 219767..220720 Rickettsia parkeri str. Portsmouth 11995780 YP_005392465.1 CDS MC1_01160 NC_017044.1 220779 221219 R COG2867 Oligoketide cyclase/lipid transport protein; oligoketide cyclase/lipid transport protein complement(220779..221219) Rickettsia parkeri str. Portsmouth 11995781 YP_005392466.1 CDS MC1_01165 NC_017044.1 221219 221500 R COG5508 Uncharacterized conserved small protein; hypothetical protein complement(221219..221500) Rickettsia parkeri str. Portsmouth 11995782 YP_005392467.1 CDS MC1_01170 NC_017044.1 221513 222247 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 221513..222247 Rickettsia parkeri str. Portsmouth 11995783 YP_005392468.1 CDS MC1_01175 NC_017044.1 222336 222572 R COG2155 Uncharacterized conserved protein; hypothetical protein complement(222336..222572) Rickettsia parkeri str. Portsmouth 11995784 YP_005392469.1 CDS MC1_01180 NC_017044.1 222827 225853 R COG0841 Cation/multidrug efflux pump; acriflavin resistance protein D complement(222827..225853) Rickettsia parkeri str. Portsmouth 11995785 YP_005392470.1 CDS MC1_01185 NC_017044.1 226243 226575 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 226243..226575 Rickettsia parkeri str. Portsmouth 11995786 YP_005392471.1 CDS MC1_01190 NC_017044.1 226730 227524 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 226730..227524 Rickettsia parkeri str. Portsmouth 11994926 YP_005392472.1 CDS MC1_01195 NC_017044.1 227733 229082 D COG0541 Signal recognition particle GTPase; signal recognition particle protein 227733..229082 Rickettsia parkeri str. Portsmouth 11994927 YP_005392473.1 CDS MC1_01200 NC_017044.1 229201 229425 R hypothetical protein complement(229201..229425) Rickettsia parkeri str. Portsmouth 11994928 YP_005392474.1 CDS MC1_01215 NC_017044.1 230101 230460 R COG1505 Serine proteases of the peptidase family S9A; prolyl endopeptidase complement(230101..230460) Rickettsia parkeri str. Portsmouth 11994929 YP_005392475.1 CDS MC1_01220 NC_017044.1 230572 230703 R prolyl endopeptidase complement(230572..230703) Rickettsia parkeri str. Portsmouth 11994930 YP_005392476.1 CDS MC1_01225 NC_017044.1 230793 230954 R COG1505 Serine proteases of the peptidase family S9A. Potential operon component.; prolyl endopeptidase complement(230793..230954) Rickettsia parkeri str. Portsmouth 11994931 YP_005392477.1 CDS MC1_01230 NC_017044.1 230936 231082 R Potential operon component.; prolyl endopeptidase complement(230936..231082) Rickettsia parkeri str. Portsmouth 11994932 YP_005392478.1 CDS MC1_01235 NC_017044.1 231055 231639 R COG1505 Serine proteases of the peptidase family S9A. Potential operon component.; prolyl endopeptidase complement(231055..231639) Rickettsia parkeri str. Portsmouth 11994933 YP_005392479.1 CDS MC1_01240 NC_017044.1 231816 233018 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 231816..233018 Rickettsia parkeri str. Portsmouth 11994934 YP_005392480.1 CDS MC1_01245 NC_017044.1 233112 233210 D hypothetical protein 233112..233210 Rickettsia parkeri str. Portsmouth 11994935 YP_005392481.1 CDS MC1_01250 NC_017044.1 233240 233581 D COG0666 FOG: Ankyrin repeat; ankyrin repeat-containing protein 233240..233581 Rickettsia parkeri str. Portsmouth 11994936 YP_005392482.1 CDS MC1_01265 NC_017044.1 234153 234338 R hypothetical protein complement(234153..234338) Rickettsia parkeri str. Portsmouth 11994937 YP_005392483.1 CDS MC1_01270 NC_017044.1 234392 235591 R COG1301 Na+/H+-dicarboxylate symporters; proton/sodium-glutamate symport protein complement(234392..235591) Rickettsia parkeri str. Portsmouth 11994938 YP_005392484.1 CDS MC1_01275 NC_017044.1 235632 235946 R COG1324 Uncharacterized protein involved in tolerance to divalent cations; Periplasmic divalent cation tolerance protein complement(235632..235946) Rickettsia parkeri str. Portsmouth 11994939 YP_005392485.1 CDS MC1_01280 NC_017044.1 235949 236365 R COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase complement(235949..236365) Rickettsia parkeri str. Portsmouth 11994940 YP_005392486.1 CDS MC1_01285 NC_017044.1 236535 237722 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase complement(236535..237722) Rickettsia parkeri str. Portsmouth 11994941 YP_005392487.1 CDS sucA NC_017044.1 237887 240673 R COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component complement(237887..240673) Rickettsia parkeri str. Portsmouth 11994942 YP_005392488.1 CDS MC1_01295 NC_017044.1 240807 242297 R COG2317 Zn-dependent carboxypeptidase; thermostable carboxypeptidase complement(240807..242297) Rickettsia parkeri str. Portsmouth 11994943 YP_005392489.1 CDS MC1_01300 NC_017044.1 242464 244110 R COG0497 ATPase involved in DNA repair; DNA repair protein RecN complement(242464..244110) Rickettsia parkeri str. Portsmouth 11994944 YP_005392490.1 CDS MC1_01305 NC_017044.1 244118 244873 R COG4105 DNA uptake lipoprotein; DNA uptake lipoprotein complement(244118..244873) Rickettsia parkeri str. Portsmouth 11994945 YP_005392491.1 CDS MC1_01310 NC_017044.1 245137 245244 R Potential operon component.; Cation transport regulator ChaB complement(245137..245244) Rickettsia parkeri str. Portsmouth 11994946 YP_005392492.1 CDS MC1_01315 NC_017044.1 245234 245335 R COG4572 Putative cation transport regulator. Potential operon component.; cation transport regulator ChaB complement(245234..245335) Rickettsia parkeri str. Portsmouth 11994947 YP_005392493.1 CDS MC1_01320 NC_017044.1 245414 246535 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(245414..246535) Rickettsia parkeri str. Portsmouth 11994948 YP_005392494.1 CDS dnaK NC_017044.1 246664 248547 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(246664..248547) Rickettsia parkeri str. Portsmouth 11994949 YP_005392495.1 CDS MC1_01330 NC_017044.1 248611 250104 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Heat shock protease 248611..250104 Rickettsia parkeri str. Portsmouth 11994950 YP_005392496.1 CDS MC1_01335 NC_017044.1 250919 251119 D ankyrin repeat-containing protein 250919..251119 Rickettsia parkeri str. Portsmouth 11994951 YP_005392497.1 CDS MC1_01340 NC_017044.1 251260 251607 R hypothetical protein complement(251260..251607) Rickettsia parkeri str. Portsmouth 11994952 YP_005392498.1 CDS MC1_01345 NC_017044.1 251776 252249 D hypothetical protein 251776..252249 Rickettsia parkeri str. Portsmouth 11994953 YP_005392499.1 CDS holA NC_017044.1 252257 253231 D COG1466 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 252257..253231 Rickettsia parkeri str. Portsmouth 11994954 YP_005392500.1 CDS MC1_01355 NC_017044.1 253383 253922 D COG2941 Ubiquinone biosynthesis protein COQ7; ubiquinone biosynthesis protein coq7 253383..253922 Rickettsia parkeri str. Portsmouth 11994955 YP_005392501.1 CDS MC1_01360 NC_017044.1 254472 255323 D COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome c oxidase subunit III 254472..255323 Rickettsia parkeri str. Portsmouth 11994956 YP_005392502.1 CDS MC1_01365 NC_017044.1 255479 255841 D COG3838 Type IV secretory pathway, VirB2 components (pilins); virB2-like protein 255479..255841 Rickettsia parkeri str. Portsmouth 11994957 YP_005392503.1 CDS MC1_01370 NC_017044.1 256185 256817 R hypothetical protein complement(256185..256817) Rickettsia parkeri str. Portsmouth 11994958 YP_005392504.1 CDS dapD NC_017044.1 256893 257717 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 256893..257717 Rickettsia parkeri str. Portsmouth 11994959 YP_005392505.1 CDS MC1_01380 NC_017044.1 258016 258420 R COG0457 FOG: TPR repeat; hypothetical protein complement(258016..258420) Rickettsia parkeri str. Portsmouth 11994960 YP_005392506.1 CDS MC1_01385 NC_017044.1 259118 259387 R hypothetical protein complement(259118..259387) Rickettsia parkeri str. Portsmouth 11994961 YP_005392507.1 CDS MC1_01390 NC_017044.1 259603 259755 R hypothetical protein complement(259603..259755) Rickettsia parkeri str. Portsmouth 11994962 YP_005392508.1 CDS MC1_01400 NC_017044.1 260242 260439 D hypothetical protein 260242..260439 Rickettsia parkeri str. Portsmouth 11994963 YP_005392509.1 CDS MC1_01410 NC_017044.1 262776 263165 D hypothetical protein 262776..263165 Rickettsia parkeri str. Portsmouth 11994964 YP_005392510.1 CDS MC1_01415 NC_017044.1 263276 263479 D hypothetical protein 263276..263479 Rickettsia parkeri str. Portsmouth 11994965 YP_005392511.1 CDS MC1_01430 NC_017044.1 263768 264037 D hypothetical protein 263768..264037 Rickettsia parkeri str. Portsmouth 11994966 YP_005392512.1 CDS MC1_01435 NC_017044.1 264218 264373 D hypothetical protein 264218..264373 Rickettsia parkeri str. Portsmouth 11994967 YP_005392513.1 CDS MC1_01440 NC_017044.1 264752 264841 R hypothetical protein complement(264752..264841) Rickettsia parkeri str. Portsmouth 11994968 YP_005392514.1 CDS MC1_01445 NC_017044.1 265026 265241 D hypothetical protein 265026..265241 Rickettsia parkeri str. Portsmouth 11994969 YP_005392515.1 CDS MC1_01450 NC_017044.1 265474 265881 D hypothetical protein 265474..265881 Rickettsia parkeri str. Portsmouth 11994970 YP_005392516.1 CDS MC1_01455 NC_017044.1 266158 266613 D cell surface antigen-like protein Sca8 266158..266613 Rickettsia parkeri str. Portsmouth 11994971 YP_005392517.1 CDS MC1_01460 NC_017044.1 266685 266828 D COG0451 Nucleoside-diphosphate-sugar epimerases; hypothetical protein 266685..266828 Rickettsia parkeri str. Portsmouth 11994972 YP_005392518.1 CDS MC1_01465 NC_017044.1 267315 267761 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; Universal stress protein UspA-like nucleotide-binding protein complement(267315..267761) Rickettsia parkeri str. Portsmouth 11994973 YP_005392519.1 CDS MC1_01470 NC_017044.1 267771 268712 R COG2358 TRAP-type uncharacterized transport system, periplasmic component; TRAP-type transport system, periplasmic protein complement(267771..268712) Rickettsia parkeri str. Portsmouth 11994974 YP_005392520.1 CDS MC1_01475 NC_017044.1 268717 269787 R hypothetical protein complement(268717..269787) Rickettsia parkeri str. Portsmouth 11994975 YP_005392521.1 CDS MC1_01480 NC_017044.1 269800 270138 R COG0633 Ferredoxin; Ferredoxin complement(269800..270138) Rickettsia parkeri str. Portsmouth 11994976 YP_005392522.1 CDS hscA NC_017044.1 270202 271989 R COG0443 Molecular chaperone; chaperone protein HscA complement(270202..271989) Rickettsia parkeri str. Portsmouth 11994977 YP_005392523.1 CDS hscB NC_017044.1 271980 272480 R COG1076 DnaJ-domain-containing proteins 1; co-chaperone HscB complement(271980..272480) Rickettsia parkeri str. Portsmouth 11994978 YP_005392524.1 CDS rnhB NC_017044.1 272542 273123 D COG0164 Ribonuclease HII; ribonuclease HII 272542..273123 Rickettsia parkeri str. Portsmouth 11994979 YP_005392525.1 CDS MC1_01500 NC_017044.1 273277 275262 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(273277..275262) Rickettsia parkeri str. Portsmouth 11994980 YP_005392526.1 CDS MC1_01505 NC_017044.1 275333 275641 D COG0695 Glutaredoxin and related proteins; glutaredoxin 3 275333..275641 Rickettsia parkeri str. Portsmouth 11994981 YP_005392527.1 CDS MC1_01510 NC_017044.1 276292 277170 D COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components; multidrug resistance protein Atm1 276292..277170 Rickettsia parkeri str. Portsmouth 11994982 YP_005392528.1 CDS MC1_01515 NC_017044.1 277459 277704 R COG0282 Acetate kinase; DNA gyrase subunit A complement(277459..277704) Rickettsia parkeri str. Portsmouth 11994983 YP_005392529.1 CDS MC1_01520 NC_017044.1 278093 278263 D hypothetical protein 278093..278263 Rickettsia parkeri str. Portsmouth 11994984 YP_005392530.1 CDS MC1_01525 NC_017044.1 278632 281349 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 278632..281349 Rickettsia parkeri str. Portsmouth 11994985 YP_005392531.1 CDS MC1_01530 NC_017044.1 281889 282059 R hypothetical protein complement(281889..282059) Rickettsia parkeri str. Portsmouth 11994986 YP_005392532.1 CDS MC1_01545 NC_017044.1 282714 283004 D COG1301 Na+/H+-dicarboxylate symporters; hypothetical protein 282714..283004 Rickettsia parkeri str. Portsmouth 11994987 YP_005392533.1 CDS MC1_01550 NC_017044.1 283089 283256 D hypothetical protein 283089..283256 Rickettsia parkeri str. Portsmouth 11994988 YP_005392534.1 CDS MC1_01555 NC_017044.1 283353 283538 D hypothetical protein 283353..283538 Rickettsia parkeri str. Portsmouth 11994989 YP_005392535.1 CDS MC1_01560 NC_017044.1 283565 283780 R hypothetical protein complement(283565..283780) Rickettsia parkeri str. Portsmouth 11994990 YP_005392536.1 CDS def NC_017044.1 283988 284515 D COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 283988..284515 Rickettsia parkeri str. Portsmouth 11994991 YP_005392537.1 CDS fmt NC_017044.1 284512 285423 D COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 284512..285423 Rickettsia parkeri str. Portsmouth 11994992 YP_005392538.1 CDS MC1_01575 NC_017044.1 285605 286021 D COG0147 Anthranilate/para-aminobenzoate synthases component I; hypothetical protein 285605..286021 Rickettsia parkeri str. Portsmouth 11994993 YP_005392539.1 CDS MC1_01590 NC_017044.1 290472 291542 R COG1485 Predicted ATPase; Putative ATPase n2B complement(290472..291542) Rickettsia parkeri str. Portsmouth 11994996 YP_005392540.1 CDS MC1_01595 NC_017044.1 291757 292854 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(291757..292854) Rickettsia parkeri str. Portsmouth 11994997 YP_005392541.1 CDS MC1_01610 NC_017044.1 293755 294009 D hypothetical protein 293755..294009 Rickettsia parkeri str. Portsmouth 11994998 YP_005392542.1 CDS MC1_01615 NC_017044.1 294215 295984 R COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug ABC transporter ATP-binding protein complement(294215..295984) Rickettsia parkeri str. Portsmouth 11994999 YP_005392543.1 CDS MC1_01620 NC_017044.1 296160 296432 D hypothetical protein 296160..296432 Rickettsia parkeri str. Portsmouth 11995000 YP_005392544.1 CDS MC1_01625 NC_017044.1 296587 297957 D COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome d ubiquinol oxidase subunit I 296587..297957 Rickettsia parkeri str. Portsmouth 11995001 YP_005392545.1 CDS MC1_01630 NC_017044.1 297965 298984 D COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit II 297965..298984 Rickettsia parkeri str. Portsmouth 11995002 YP_005392546.1 CDS MC1_01635 NC_017044.1 299186 299428 D COG2161 Antitoxin of toxin-antitoxin stability system; antitoxin of toxin-antitoxin (TA) system stbD 299186..299428 Rickettsia parkeri str. Portsmouth 11995003 YP_005392547.1 CDS MC1_01640 NC_017044.1 299439 299699 D COG4115 Uncharacterized protein conserved in bacteria; Putative toxin of toxin-antitoxin (TA) system 299439..299699 Rickettsia parkeri str. Portsmouth 11995004 YP_005392548.1 CDS MC1_01645 NC_017044.1 299692 300540 D COG0463 Glycosyltransferases involved in cell wall biogenesis; Beta 1,4 glucosyltransferase 299692..300540 Rickettsia parkeri str. Portsmouth 11995005 YP_005392549.1 CDS MC1_01650 NC_017044.1 300617 301855 D COG0612 Predicted Zn-dependent peptidases; protease 300617..301855 Rickettsia parkeri str. Portsmouth 11995006 YP_005392550.1 CDS MC1_01655 NC_017044.1 302009 302719 D COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 302009..302719 Rickettsia parkeri str. Portsmouth 11995007 YP_005392551.1 CDS MC1_01660 NC_017044.1 302939 304525 D hypothetical protein 302939..304525 Rickettsia parkeri str. Portsmouth 11995008 YP_005392552.1 CDS thrS NC_017044.1 304621 306528 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 304621..306528 Rickettsia parkeri str. Portsmouth 11995009 YP_005392553.1 CDS MC1_01700 NC_017044.1 309404 309553 R hypothetical protein complement(309404..309553) Rickettsia parkeri str. Portsmouth 11995010 YP_005392554.1 CDS MC1_01705 NC_017044.1 309771 310187 R hypothetical protein complement(309771..310187) Rickettsia parkeri str. Portsmouth 11995011 YP_005392555.1 CDS MC1_01710 NC_017044.1 310218 310364 D hypothetical protein 310218..310364 Rickettsia parkeri str. Portsmouth 11995012 YP_005392556.1 CDS MC1_01715 NC_017044.1 310384 310830 R hypothetical protein complement(310384..310830) Rickettsia parkeri str. Portsmouth 11995013 YP_005392557.1 CDS MC1_01720 NC_017044.1 310823 310921 R hypothetical protein complement(310823..310921) Rickettsia parkeri str. Portsmouth 11995014 YP_005392558.1 CDS MC1_01725 NC_017044.1 311067 311267 R hypothetical protein complement(311067..311267) Rickettsia parkeri str. Portsmouth 11995015 YP_005392559.1 CDS MC1_01730 NC_017044.1 311515 312876 D COG1538 Outer membrane protein; outer membrane protein tolC 311515..312876 Rickettsia parkeri str. Portsmouth 11995016 YP_005392560.1 CDS MC1_01735 NC_017044.1 312878 313276 D COG3827 Uncharacterized protein conserved in bacteria; hypothetical protein 312878..313276 Rickettsia parkeri str. Portsmouth 11995017 YP_005392561.1 CDS MC1_01740 NC_017044.1 313285 313503 D hypothetical protein 313285..313503 Rickettsia parkeri str. Portsmouth 11995018 YP_005392562.1 CDS MC1_01745 NC_017044.1 313493 315214 D COG0666 FOG: Ankyrin repeat; ankyrin repeat-containing protein 313493..315214 Rickettsia parkeri str. Portsmouth 11995019 YP_005392563.1 CDS MC1_01750 NC_017044.1 315424 317412 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B 315424..317412 Rickettsia parkeri str. Portsmouth 11995020 YP_005392564.1 CDS MC1_01755 NC_017044.1 317529 318899 D COG0793 Periplasmic protease; tail-specific protease 317529..318899 Rickettsia parkeri str. Portsmouth 11995021 YP_005392565.1 CDS MC1_01760 NC_017044.1 319114 320607 D COG0642 Signal transduction histidine kinase; Histidine kinase sensor protein 319114..320607 Rickettsia parkeri str. Portsmouth 11995022 YP_005392566.1 CDS MC1_01765 NC_017044.1 320673 321410 D COG1729 Uncharacterized protein conserved in bacteria; Tol system periplasmic component 320673..321410 Rickettsia parkeri str. Portsmouth 11995023 YP_005392567.1 CDS MC1_01770 NC_017044.1 321423 322085 D hypothetical protein 321423..322085 Rickettsia parkeri str. Portsmouth 11995024 YP_005392568.1 CDS MC1_01775 NC_017044.1 322108 323352 D COG1520 FOG: WD40-like repeat; WD40-like repeat protein 322108..323352 Rickettsia parkeri str. Portsmouth 11995025 YP_005392569.1 CDS rplM NC_017044.1 323445 323912 D COG0102 Ribosomal protein L13; 50S ribosomal protein L13 323445..323912 Rickettsia parkeri str. Portsmouth 11995026 YP_005392570.1 CDS rpsI NC_017044.1 323919 324398 D COG0103 Ribosomal protein S9; 30S ribosomal protein S9 323919..324398 Rickettsia parkeri str. Portsmouth 11995027 YP_005392571.1 CDS MC1_01790 NC_017044.1 324871 325071 D COG2173 D-alanyl-D-alanine dipeptidase; D-alanyl-D-alanine dipeptidase 324871..325071 Rickettsia parkeri str. Portsmouth 11995029 YP_005392572.1 CDS MC1_01795 NC_017044.1 325679 325972 D hypothetical protein 325679..325972 Rickettsia parkeri str. Portsmouth 11995030 YP_005392573.1 CDS MC1_01800 NC_017044.1 326373 326858 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase complement(326373..326858) Rickettsia parkeri str. Portsmouth 11995031 YP_005392574.1 CDS pleD NC_017044.1 326883 328235 R COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; response regulator PleD complement(326883..328235) Rickettsia parkeri str. Portsmouth 11995032 YP_005392575.1 CDS MC1_01810 NC_017044.1 328311 328877 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 328311..328877 Rickettsia parkeri str. Portsmouth 11995033 YP_005392576.1 CDS MC1_01815 NC_017044.1 329099 329845 D COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; extragenic suppressor protein suhB 329099..329845 Rickettsia parkeri str. Portsmouth 11995034 YP_005392577.1 CDS MC1_01820 NC_017044.1 329917 330240 D hypothetical protein 329917..330240 Rickettsia parkeri str. Portsmouth 11995035 YP_005392578.1 CDS MC1_01825 NC_017044.1 330274 330969 D COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 330274..330969 Rickettsia parkeri str. Portsmouth 11995036 YP_005392579.1 CDS MC1_01830 NC_017044.1 331231 331995 D COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase 331231..331995 Rickettsia parkeri str. Portsmouth 11995037 YP_005392580.1 CDS MC1_01835 NC_017044.1 332004 333056 D COG1566 Multidrug resistance efflux pump; multidrug resistance protein A 332004..333056 Rickettsia parkeri str. Portsmouth 11995038 YP_005392581.1 CDS MC1_01840 NC_017044.1 333627 333719 D hypothetical protein 333627..333719 Rickettsia parkeri str. Portsmouth 11995039 YP_005392582.1 CDS MC1_01845 NC_017044.1 333871 334074 R hypothetical protein complement(333871..334074) Rickettsia parkeri str. Portsmouth 11995040 YP_005392583.1 CDS MC1_01850 NC_017044.1 334071 334298 R COG0271 Stress-induced morphogen (activity unknown); morphology/transcriptional regulatory protein BolA complement(334071..334298) Rickettsia parkeri str. Portsmouth 11995041 YP_005392584.1 CDS MC1_01855 NC_017044.1 334368 335594 D COG2200 FOG: EAL domain; hypothetical protein 334368..335594 Rickettsia parkeri str. Portsmouth 11995042 YP_005392585.1 CDS murC NC_017044.1 335815 337272 D COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 335815..337272 Rickettsia parkeri str. Portsmouth 11995043 YP_005392586.1 CDS murB NC_017044.1 337404 338291 D COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 337404..338291 Rickettsia parkeri str. Portsmouth 11995044 YP_005392587.1 CDS ddl NC_017044.1 338535 339500 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanine--D-alanine ligase 338535..339500 Rickettsia parkeri str. Portsmouth 11995045 YP_005392588.1 CDS MC1_01875 NC_017044.1 339497 340300 D COG1589 Cell division septal protein; cell division protein ftsQ 339497..340300 Rickettsia parkeri str. Portsmouth 11995046 YP_005392589.1 CDS MC1_01880 NC_017044.1 340428 341663 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 340428..341663 Rickettsia parkeri str. Portsmouth 11995047 YP_005392590.1 CDS MC1_01885 NC_017044.1 341806 342282 R membrane protein complement(341806..342282) Rickettsia parkeri str. Portsmouth 11995048 YP_005392591.1 CDS MC1_01890 NC_017044.1 342266 342793 R COG3474 Cytochrome c2; cytochrome c complement(342266..342793) Rickettsia parkeri str. Portsmouth 11995049 YP_005392592.1 CDS MC1_01895 NC_017044.1 342907 343977 D hypothetical protein 342907..343977 Rickettsia parkeri str. Portsmouth 11995050 YP_005392593.1 CDS lpxC NC_017044.1 343986 344852 R COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(343986..344852) Rickettsia parkeri str. Portsmouth 11995051 YP_005392594.1 CDS MC1_01905 NC_017044.1 345215 346363 R hypothetical protein complement(345215..346363) Rickettsia parkeri str. Portsmouth 11995052 YP_005392595.1 CDS MC1_01910 NC_017044.1 346790 348862 D COG1530 Ribonucleases G and E; ribonuclease E 346790..348862 Rickettsia parkeri str. Portsmouth 11995053 YP_005392596.1 CDS MC1_01915 NC_017044.1 349108 350121 D COG1612 Uncharacterized protein required for cytochrome oxidase assembly; cytochrome c oxidase assembly protein 349108..350121 Rickettsia parkeri str. Portsmouth 11995054 YP_005392597.1 CDS MC1_01920 NC_017044.1 350134 351045 D COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase C 350134..351045 Rickettsia parkeri str. Portsmouth 11995055 YP_005392598.1 CDS MC1_01925 NC_017044.1 351200 352381 D COG1680 Beta-lactamase class C and other penicillin binding proteins; Penicillin-binding protein 4 351200..352381 Rickettsia parkeri str. Portsmouth 11995056 YP_005392599.1 CDS MC1_01930 NC_017044.1 352528 353343 D COG0708 Exonuclease III; exodeoxyribonuclease III 352528..353343 Rickettsia parkeri str. Portsmouth 11995057 YP_005392600.1 CDS MC1_01935 NC_017044.1 353366 354346 D COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; pyruvate dehydrogenase e1 component subunit alpha 353366..354346 Rickettsia parkeri str. Portsmouth 11995058 YP_005392601.1 CDS MC1_01940 NC_017044.1 354483 355463 D COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; pyruvate dehydrogenase subunit beta 354483..355463 Rickettsia parkeri str. Portsmouth 11995059 YP_005392602.1 CDS MC1_01945 NC_017044.1 355601 357430 R COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein complement(355601..357430) Rickettsia parkeri str. Portsmouth 11995060 YP_005392603.1 CDS MC1_01950 NC_017044.1 357579 357818 D hypothetical protein 357579..357818 Rickettsia parkeri str. Portsmouth 11995061 YP_005392604.1 CDS MC1_01955 NC_017044.1 357797 358129 D hypothetical protein 357797..358129 Rickettsia parkeri str. Portsmouth 11995062 YP_005392605.1 CDS MC1_01960 NC_017044.1 358190 358333 D hypothetical protein 358190..358333 Rickettsia parkeri str. Portsmouth 11995063 YP_005392606.1 CDS MC1_01965 NC_017044.1 358554 359108 D COG2825 Outer membrane protein; outer membrane protein 358554..359108 Rickettsia parkeri str. Portsmouth 11995064 YP_005392607.1 CDS MC1_01970 NC_017044.1 359286 360737 D COG0473 Isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 359286..360737 Rickettsia parkeri str. Portsmouth 11995065 YP_005392608.1 CDS MC1_01975 NC_017044.1 360852 361172 D COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit; putative monovalent cation/H+ antiporter subunit G 360852..361172 Rickettsia parkeri str. Portsmouth 11995066 YP_005392609.1 CDS MC1_01980 NC_017044.1 361236 362309 D COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter; putative monovalent cation/H+ antiporter subunit B 361236..362309 Rickettsia parkeri str. Portsmouth 11995067 YP_005392610.1 CDS MC1_01985 NC_017044.1 362302 362949 D heme exporter protein B 362302..362949 Rickettsia parkeri str. Portsmouth 11995068 YP_005392611.1 CDS MC1_01990 NC_017044.1 363024 363482 D hypothetical protein 363024..363482 Rickettsia parkeri str. Portsmouth 11995069 YP_005392612.1 CDS MC1_01995 NC_017044.1 363504 364037 D COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase iron-sulfur subunit 363504..364037 Rickettsia parkeri str. Portsmouth 11995070 YP_005392613.1 CDS MC1_02000 NC_017044.1 364044 365240 D COG1290 Cytochrome b subunit of the bc complex; cytochrome b 364044..365240 Rickettsia parkeri str. Portsmouth 11995071 YP_005392614.1 CDS MC1_02005 NC_017044.1 365540 365614 D hypothetical protein 365540..365614 Rickettsia parkeri str. Portsmouth 11995072 YP_005392615.1 CDS MC1_02010 NC_017044.1 365731 366486 D COG2857 Cytochrome c1; cytochrome c1, heme protein 365731..366486 Rickettsia parkeri str. Portsmouth 11995073 YP_005392616.1 CDS MC1_02025 NC_017044.1 367277 367780 D COG0071 Molecular chaperone (small heat shock protein); small heat shock protein 367277..367780 Rickettsia parkeri str. Portsmouth 11995074 YP_005392617.1 CDS MC1_02030 NC_017044.1 368261 368401 R hypothetical protein complement(368261..368401) Rickettsia parkeri str. Portsmouth 11995075 YP_005392618.1 CDS MC1_02035 NC_017044.1 368638 368925 R COG4804 Uncharacterized conserved protein; hypothetical protein complement(368638..368925) Rickettsia parkeri str. Portsmouth 11995076 YP_005392619.1 CDS prfB NC_017044.1 369670 370431 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(369670..370431) Rickettsia parkeri str. Portsmouth 11995077 YP_005392620.1 CDS MC1_02055 NC_017044.1 370895 372697 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 370895..372697 Rickettsia parkeri str. Portsmouth 11995078 YP_005392621.1 CDS MC1_02060 NC_017044.1 372822 373091 R Potentially inactive due to overlap with tRNA; cassette chromosome recombinase B complement(372822..373091) Rickettsia parkeri str. Portsmouth 11995080 YP_005392622.1 CDS MC1_02065 NC_017044.1 373218 373316 R hypothetical protein complement(373218..373316) Rickettsia parkeri str. Portsmouth 11995081 YP_005392623.1 CDS MC1_02070 NC_017044.1 373471 373584 D hypothetical protein 373471..373584 Rickettsia parkeri str. Portsmouth 11995082 YP_005392624.1 CDS MC1_02075 NC_017044.1 373650 373790 R COG3093 Plasmid maintenance system antidote protein; Plasmid maintenance system antidote protein complement(373650..373790) Rickettsia parkeri str. Portsmouth 11995083 YP_005392625.1 CDS MC1_02080 NC_017044.1 373798 373959 R outer membrane protein A complement(373798..373959) Rickettsia parkeri str. Portsmouth 11995084 YP_005392626.1 CDS MC1_02095 NC_017044.1 375826 376038 R hypothetical protein complement(375826..376038) Rickettsia parkeri str. Portsmouth 11995085 YP_005392627.1 CDS MC1_02100 NC_017044.1 376372 376968 D hypothetical protein 376372..376968 Rickettsia parkeri str. Portsmouth 11995086 YP_005392628.1 CDS MC1_02105 NC_017044.1 377494 377631 D hypothetical protein 377494..377631 Rickettsia parkeri str. Portsmouth 11995087 YP_005392629.1 CDS MC1_02110 NC_017044.1 377639 377743 D hypothetical protein 377639..377743 Rickettsia parkeri str. Portsmouth 11995088 YP_005392630.1 CDS MC1_02115 NC_017044.1 377722 378270 D hypothetical protein 377722..378270 Rickettsia parkeri str. Portsmouth 11995089 YP_005392631.1 CDS MC1_02120 NC_017044.1 378474 378998 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp 3-pyrophosphohydrolase 378474..378998 Rickettsia parkeri str. Portsmouth 11995090 YP_005392632.1 CDS MC1_02125 NC_017044.1 379192 379611 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter complement(379192..379611) Rickettsia parkeri str. Portsmouth 11995091 YP_005392633.1 CDS MC1_02130 NC_017044.1 380058 381158 R COG0772 Bacterial cell division membrane protein; rod shape-determining protein RodA complement(380058..381158) Rickettsia parkeri str. Portsmouth 11995092 YP_005392634.1 CDS MC1_02135 NC_017044.1 381314 383503 R COG1770 Protease II; protease II complement(381314..383503) Rickettsia parkeri str. Portsmouth 11995093 YP_005392635.1 CDS MC1_02140 NC_017044.1 383682 385199 R COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; putative monovalent cation/H+ antiporter subunit D complement(383682..385199) Rickettsia parkeri str. Portsmouth 11995094 YP_005392636.1 CDS MC1_02145 NC_017044.1 385201 385605 R COG1487 Predicted nucleic acid-binding protein, contains PIN domain; Toxin of toxin-antitoxin (TA) system VapC, containing PIN domain for nucleic acid binding protein complement(385201..385605) Rickettsia parkeri str. Portsmouth 11995095 YP_005392637.1 CDS MC1_02150 NC_017044.1 385589 385882 R toxin-antitoxin (TA) system antitoxin VapB complement(385589..385882) Rickettsia parkeri str. Portsmouth 11995096 YP_005392638.1 CDS MC1_02155 NC_017044.1 386069 387532 R COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; putative monovalent cation/H+ antiporter subunit D complement(386069..387532) Rickettsia parkeri str. Portsmouth 11995097 YP_005392639.1 CDS MC1_02160 NC_017044.1 387679 388980 R COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; putative monovalent cation/H+ antiporter subunit D complement(387679..388980) Rickettsia parkeri str. Portsmouth 11995098 YP_005392640.1 CDS MC1_02165 NC_017044.1 388977 389312 R COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit; putative monovalent cation/H+ antiporter subunit C complement(388977..389312) Rickettsia parkeri str. Portsmouth 11995099 YP_005392641.1 CDS MC1_02170 NC_017044.1 389391 390143 R COG3504 Type IV secretory pathway, VirB9 components; VirB9 complement(389391..390143) Rickettsia parkeri str. Portsmouth 11995100 YP_005392642.1 CDS MC1_02175 NC_017044.1 390145 390843 R COG3736 Type IV secretory pathway, component VirB8; virulence protein complement(390145..390843) Rickettsia parkeri str. Portsmouth 11995101 YP_005392643.1 CDS MC1_02180 NC_017044.1 391313 391492 D hypothetical protein 391313..391492 Rickettsia parkeri str. Portsmouth 11995102 YP_005392644.1 CDS MC1_02185 NC_017044.1 391542 392273 D COG3736 Type IV secretory pathway, component VirB8; hypothetical protein 391542..392273 Rickettsia parkeri str. Portsmouth 11995103 YP_005392645.1 CDS MC1_02190 NC_017044.1 392260 392733 D COG3504 Type IV secretory pathway, VirB9 components; VirB9 392260..392733 Rickettsia parkeri str. Portsmouth 11995104 YP_005392646.1 CDS MC1_02195 NC_017044.1 392917 394371 D COG2948 Type IV secretory pathway, VirB10 components; virB10 protein 392917..394371 Rickettsia parkeri str. Portsmouth 11995105 YP_005392647.1 CDS MC1_02200 NC_017044.1 394368 395372 D COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase VirB11 394368..395372 Rickettsia parkeri str. Portsmouth 11995106 YP_005392648.1 CDS MC1_02205 NC_017044.1 395511 397286 D COG3505 Type IV secretory pathway, VirD4 components; type IV secretion system protein VirB8 395511..397286 Rickettsia parkeri str. Portsmouth 11995107 YP_005392649.1 CDS MC1_02210 NC_017044.1 397288 398700 D COG0248 Exopolyphosphatase; Guanosine pentaphosphate phosphohydrolase 397288..398700 Rickettsia parkeri str. Portsmouth 11995108 YP_005392650.1 CDS MC1_02225 NC_017044.1 400102 400482 R hypothetical protein complement(400102..400482) Rickettsia parkeri str. Portsmouth 11995109 YP_005392651.1 CDS MC1_02230 NC_017044.1 400891 400989 D Phage portal protein 400891..400989 Rickettsia parkeri str. Portsmouth 11995110 YP_005392652.1 CDS MC1_02235 NC_017044.1 400934 401152 D hypothetical protein 400934..401152 Rickettsia parkeri str. Portsmouth 11995111 YP_005392653.1 CDS MC1_02240 NC_017044.1 401265 401390 R hypothetical protein complement(401265..401390) Rickettsia parkeri str. Portsmouth 11995112 YP_005392654.1 CDS MC1_02245 NC_017044.1 401623 402510 D hypothetical protein 401623..402510 Rickettsia parkeri str. Portsmouth 11995113 YP_005392655.1 CDS MC1_02250 NC_017044.1 402473 403318 D hypothetical protein 402473..403318 Rickettsia parkeri str. Portsmouth 11995114 YP_005392656.1 CDS MC1_02255 NC_017044.1 403321 404097 D COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase 403321..404097 Rickettsia parkeri str. Portsmouth 11995115 YP_005392657.1 CDS MC1_02260 NC_017044.1 404237 406909 R COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS complement(404237..406909) Rickettsia parkeri str. Portsmouth 11995116 YP_005392658.1 CDS MC1_02265 NC_017044.1 407082 407516 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(407082..407516) Rickettsia parkeri str. Portsmouth 11995117 YP_005392659.1 CDS MC1_02270 NC_017044.1 407568 408242 D COG0739 Membrane proteins related to metalloendopeptidases; Membrane-bound metallopeptidase 407568..408242 Rickettsia parkeri str. Portsmouth 11995118 YP_005392660.1 CDS MC1_02275 NC_017044.1 408243 408935 D COG1451 Predicted metal-dependent hydrolase; Putative metal-dependent hydrolase 408243..408935 Rickettsia parkeri str. Portsmouth 11995119 YP_005392661.1 CDS thyX NC_017044.1 409044 409928 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 409044..409928 Rickettsia parkeri str. Portsmouth 11995120 YP_005392662.1 CDS tolB NC_017044.1 410003 411337 D COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB 410003..411337 Rickettsia parkeri str. Portsmouth 11995121 YP_005392663.1 CDS MC1_02290 NC_017044.1 411476 412357 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase factor sigma-32 complement(411476..412357) Rickettsia parkeri str. Portsmouth 11995122 YP_005392664.1 CDS MC1_02295 NC_017044.1 412446 413012 D COG3175 Cytochrome oxidase assembly factor; cytochrome C oxidase assembly protein 412446..413012 Rickettsia parkeri str. Portsmouth 11995123 YP_005392665.1 CDS MC1_02300 NC_017044.1 413110 414090 R COG0457 FOG: TPR repeat; hypothetical protein complement(413110..414090) Rickettsia parkeri str. Portsmouth 11995124 YP_005392666.1 CDS mnmA NC_017044.1 414354 415451 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 414354..415451 Rickettsia parkeri str. Portsmouth 11995125 YP_005392667.1 CDS MC1_02310 NC_017044.1 415582 416979 D COG0531 Amino acid transporters; cationic amino acid transporter-1 415582..416979 Rickettsia parkeri str. Portsmouth 11995126 YP_005392668.1 CDS hisS NC_017044.1 417129 418373 D COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase 417129..418373 Rickettsia parkeri str. Portsmouth 11995127 YP_005392669.1 CDS MC1_02320 NC_017044.1 418806 419003 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 418806..419003 Rickettsia parkeri str. Portsmouth 11995128 YP_005392670.1 CDS MC1_02325 NC_017044.1 419038 419283 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 419038..419283 Rickettsia parkeri str. Portsmouth 11995129 YP_005392671.1 CDS MC1_02330 NC_017044.1 419775 420122 R hypothetical protein complement(419775..420122) Rickettsia parkeri str. Portsmouth 11995130 YP_005392672.1 CDS MC1_02335 NC_017044.1 420073 420600 R COG0584 Glycerophosphoryl diester phosphodiesterase; hypothetical protein complement(420073..420600) Rickettsia parkeri str. Portsmouth 11995131 YP_005392673.1 CDS MC1_02350 NC_017044.1 421854 422138 R hypothetical protein complement(421854..422138) Rickettsia parkeri str. Portsmouth 11995132 YP_005392674.1 CDS MC1_02365 NC_017044.1 423048 423773 D COG0811 Biopolymer transport proteins; TolQ 423048..423773 Rickettsia parkeri str. Portsmouth 11995133 YP_005392675.1 CDS MC1_02370 NC_017044.1 423773 424204 D COG0848 Biopolymer transport protein; TolR 423773..424204 Rickettsia parkeri str. Portsmouth 11995134 YP_005392676.1 CDS MC1_02375 NC_017044.1 424194 425165 D tonB/tolA protein 424194..425165 Rickettsia parkeri str. Portsmouth 11995135 YP_005392677.1 CDS MC1_02380 NC_017044.1 425364 425522 R hypothetical protein complement(425364..425522) Rickettsia parkeri str. Portsmouth 11995136 YP_005392678.1 CDS MC1_02385 NC_017044.1 426155 426862 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; Guanosine polyphosphate pyrophosphohydrolase/synthetase 426155..426862 Rickettsia parkeri str. Portsmouth 11995137 YP_005392679.1 CDS MC1_02390 NC_017044.1 426813 428129 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter complement(426813..428129) Rickettsia parkeri str. Portsmouth 11995138 YP_005392680.1 CDS MC1_02395 NC_017044.1 428268 429803 R COG0845 Membrane-fusion protein; alkaline protease secretion protein AprE complement(428268..429803) Rickettsia parkeri str. Portsmouth 11995139 YP_005392681.1 CDS MC1_02400 NC_017044.1 429988 431742 R COG4618 ABC-type protease/lipase transport system, ATPase and permease components; Alkaline protease secretion ATP-binding protein AprD complement(429988..431742) Rickettsia parkeri str. Portsmouth 11995140 YP_005392682.1 CDS MC1_02405 NC_017044.1 431754 432770 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(431754..432770) Rickettsia parkeri str. Portsmouth 11995141 YP_005392683.1 CDS MC1_02410 NC_017044.1 432763 433122 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; protein kinase C inhibitor 1 complement(432763..433122) Rickettsia parkeri str. Portsmouth 11995142 YP_005392684.1 CDS MC1_02415 NC_017044.1 433315 433668 R hypothetical protein complement(433315..433668) Rickettsia parkeri str. Portsmouth 11995143 YP_005392685.1 CDS MC1_02420 NC_017044.1 433770 433871 R hypothetical protein complement(433770..433871) Rickettsia parkeri str. Portsmouth 11995144 YP_005392686.1 CDS MC1_02425 NC_017044.1 433953 434501 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 433953..434501 Rickettsia parkeri str. Portsmouth 11995145 YP_005392687.1 CDS hslU NC_017044.1 434498 435850 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 434498..435850 Rickettsia parkeri str. Portsmouth 11995146 YP_005392688.1 CDS MC1_02450 NC_017044.1 437216 437356 D hypothetical protein 437216..437356 Rickettsia parkeri str. Portsmouth 11995147 YP_005392689.1 CDS MC1_02455 NC_017044.1 437413 437598 D hypothetical protein 437413..437598 Rickettsia parkeri str. Portsmouth 11995148 YP_005392690.1 CDS MC1_02460 NC_017044.1 437574 438116 D hypothetical protein 437574..438116 Rickettsia parkeri str. Portsmouth 11995149 YP_005392691.1 CDS lpxB NC_017044.1 438162 439502 D COG0763 Lipid A disaccharide synthetase; lipid-A-disaccharide synthase 438162..439502 Rickettsia parkeri str. Portsmouth 11995150 YP_005392692.1 CDS MC1_02470 NC_017044.1 439499 439771 R hypothetical protein complement(439499..439771) Rickettsia parkeri str. Portsmouth 11995151 YP_005392693.1 CDS MC1_02475 NC_017044.1 440120 441139 D COG1559 Predicted periplasmic solute-binding protein; Aminodeoxychorismate lyase 440120..441139 Rickettsia parkeri str. Portsmouth 11995152 YP_005392694.1 CDS cyaY NC_017044.1 441279 441590 D COG1965 Protein implicated in iron transport, frataxin homolog; frataxin-like protein 441279..441590 Rickettsia parkeri str. Portsmouth 11995153 YP_005392695.1 CDS MC1_02485 NC_017044.1 441728 442297 D hypothetical protein 441728..442297 Rickettsia parkeri str. Portsmouth 11995154 YP_005392696.1 CDS MC1_02490 NC_017044.1 443062 443196 D hypothetical protein 443062..443196 Rickettsia parkeri str. Portsmouth 11995155 YP_005392697.1 CDS MC1_02505 NC_017044.1 444345 444482 D hypothetical protein 444345..444482 Rickettsia parkeri str. Portsmouth 11995156 YP_005392698.1 CDS MC1_02510 NC_017044.1 444503 444697 D hypothetical protein 444503..444697 Rickettsia parkeri str. Portsmouth 11995157 YP_005392699.1 CDS MC1_02515 NC_017044.1 444740 444868 D hypothetical protein 444740..444868 Rickettsia parkeri str. Portsmouth 11995158 YP_005392700.1 CDS MC1_02520 NC_017044.1 445055 446398 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(445055..446398) Rickettsia parkeri str. Portsmouth 11995159 YP_005392701.1 CDS MC1_02525 NC_017044.1 446507 448837 R COG0550 Topoisomerase IA; DNA topoisomerase I complement(446507..448837) Rickettsia parkeri str. Portsmouth 11995160 YP_005392702.1 CDS MC1_02530 NC_017044.1 448912 449304 R COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing protein Smf complement(448912..449304) Rickettsia parkeri str. Portsmouth 11995161 YP_005392703.1 CDS MC1_02535 NC_017044.1 449384 449632 R COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing protein DprA complement(449384..449632) Rickettsia parkeri str. Portsmouth 11995162 YP_005392704.1 CDS MC1_02540 NC_017044.1 449735 449923 D hypothetical protein 449735..449923 Rickettsia parkeri str. Portsmouth 11995163 YP_005392705.1 CDS MC1_02545 NC_017044.1 450239 450841 R COG0450 Peroxiredoxin; thioredoxin peroxidase 1 complement(450239..450841) Rickettsia parkeri str. Portsmouth 11995164 YP_005392706.1 CDS MC1_02550 NC_017044.1 450923 451861 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; Membrane protease subunit, stomatin/prohibitin-like protein complement(450923..451861) Rickettsia parkeri str. Portsmouth 11995165 YP_005392707.1 CDS MC1_02555 NC_017044.1 451939 452166 R hypothetical protein complement(451939..452166) Rickettsia parkeri str. Portsmouth 11995166 YP_005392708.1 CDS MC1_02560 NC_017044.1 452233 453801 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein complement(452233..453801) Rickettsia parkeri str. Portsmouth 11995167 YP_005392709.1 CDS MC1_02565 NC_017044.1 453837 454301 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 453837..454301 Rickettsia parkeri str. Portsmouth 11995168 YP_005392710.1 CDS MC1_02570 NC_017044.1 454559 454729 D COG3093 Plasmid maintenance system antidote protein. Potential operon component.; Plasmid maintenance system antidote protein 454559..454729 Rickettsia parkeri str. Portsmouth 11995169 YP_005392711.1 CDS MC1_02575 NC_017044.1 454713 454802 D Potential operon component.; plasmid maintenance system antidote protein 454713..454802 Rickettsia parkeri str. Portsmouth 11995170 YP_005392712.1 CDS MC1_02580 NC_017044.1 454905 455759 D COG1091 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 454905..455759 Rickettsia parkeri str. Portsmouth 11995171 YP_005392713.1 CDS MC1_02585 NC_017044.1 455942 456967 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; Putative nucleoside-diphosphate sugar epimerase CapD 455942..456967 Rickettsia parkeri str. Portsmouth 11995172 YP_005392714.1 CDS MC1_02590 NC_017044.1 456960 458093 D COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 456960..458093 Rickettsia parkeri str. Portsmouth 11995173 YP_005392715.1 CDS MC1_02595 NC_017044.1 458053 459399 D hypothetical protein 458053..459399 Rickettsia parkeri str. Portsmouth 11995174 YP_005392716.1 CDS MC1_02600 NC_017044.1 459415 459900 D COG0500 SAM-dependent methyltransferases; hypothetical protein 459415..459900 Rickettsia parkeri str. Portsmouth 11995175 YP_005392717.1 CDS MC1_02605 NC_017044.1 460324 462138 D COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase 460324..462138 Rickettsia parkeri str. Portsmouth 11995176 YP_005392718.1 CDS MC1_02610 NC_017044.1 462143 463141 R COG0845 Membrane-fusion protein; Efflux transporter, RND family, MFP subunit complement(462143..463141) Rickettsia parkeri str. Portsmouth 11995177 YP_005392719.1 CDS MC1_02615 NC_017044.1 463233 464027 R hypothetical protein complement(463233..464027) Rickettsia parkeri str. Portsmouth 11995178 YP_005392720.1 CDS MC1_02620 NC_017044.1 464037 464804 R COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Putative hydrolase/acyltransferase complement(464037..464804) Rickettsia parkeri str. Portsmouth 11995179 YP_005392721.1 CDS MC1_02625 NC_017044.1 464837 466009 D COG0438 Glycosyltransferase; capM protein 464837..466009 Rickettsia parkeri str. Portsmouth 11995180 YP_005392722.1 CDS MC1_02630 NC_017044.1 466835 467122 R ABC transporter ATP-binding protein complement(466835..467122) Rickettsia parkeri str. Portsmouth 11995181 YP_005392723.1 CDS MC1_02635 NC_017044.1 467702 467854 R 30S ribosomal protein S4 complement(467702..467854) Rickettsia parkeri str. Portsmouth 11995182 YP_005392724.1 CDS rpsD NC_017044.1 468540 469157 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(468540..469157) Rickettsia parkeri str. Portsmouth 11995183 YP_005392725.1 CDS MC1_02645 NC_017044.1 469282 470199 D COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 469282..470199 Rickettsia parkeri str. Portsmouth 11995184 YP_005392726.1 CDS MC1_02650 NC_017044.1 470715 471146 R COG1533 DNA repair photolyase; spore photoproduct lyase complement(470715..471146) Rickettsia parkeri str. Portsmouth 11995185 YP_005392727.1 CDS MC1_02655 NC_017044.1 471346 471561 D hypothetical protein 471346..471561 Rickettsia parkeri str. Portsmouth 11995186 YP_005392728.1 CDS MC1_02660 NC_017044.1 471714 472073 D COG0457 FOG: TPR repeat; hypothetical protein 471714..472073 Rickettsia parkeri str. Portsmouth 11995187 YP_005392729.1 CDS MC1_02665 NC_017044.1 472214 474706 R COG2982 Uncharacterized protein involved in outer membrane biogenesis; outer membrane assembly protein complement(472214..474706) Rickettsia parkeri str. Portsmouth 11995188 YP_005392730.1 CDS rimM NC_017044.1 475016 475513 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(475016..475513) Rickettsia parkeri str. Portsmouth 11995189 YP_005392731.1 CDS MC1_02675 NC_017044.1 475531 478206 D hypothetical protein 475531..478206 Rickettsia parkeri str. Portsmouth 11995190 YP_005392732.1 CDS MC1_02680 NC_017044.1 478220 478462 D COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 478220..478462 Rickettsia parkeri str. Portsmouth 11995191 YP_005392733.1 CDS MC1_02700 NC_017044.1 479157 479756 D hypothetical protein 479157..479756 Rickettsia parkeri str. Portsmouth 11995192 YP_005392734.1 CDS MC1_02705 NC_017044.1 479847 480398 R COG2094 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase complement(479847..480398) Rickettsia parkeri str. Portsmouth 11995193 YP_005392735.1 CDS MC1_02710 NC_017044.1 480493 480594 R hypothetical protein complement(480493..480594) Rickettsia parkeri str. Portsmouth 11995194 YP_005392736.1 CDS MC1_02715 NC_017044.1 480692 480940 R COG0759 Uncharacterized conserved protein; hypothetical protein complement(480692..480940) Rickettsia parkeri str. Portsmouth 11995195 YP_005392737.1 CDS MC1_02720 NC_017044.1 480933 481436 R COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; NADH dehydrogenase subunit E complement(480933..481436) Rickettsia parkeri str. Portsmouth 11995196 YP_005392738.1 CDS MC1_02730 NC_017044.1 481860 483035 R COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D complement(481860..483035) Rickettsia parkeri str. Portsmouth 11995198 YP_005392739.1 CDS MC1_02735 NC_017044.1 483134 483862 R COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C complement(483134..483862) Rickettsia parkeri str. Portsmouth 11995199 YP_005392740.1 CDS MC1_02740 NC_017044.1 483840 484364 R COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B complement(483840..484364) Rickettsia parkeri str. Portsmouth 11995200 YP_005392741.1 CDS MC1_02745 NC_017044.1 484369 484740 R COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH:ubiquinone oxidoreductase subunit A complement(484369..484740) Rickettsia parkeri str. Portsmouth 11995201 YP_005392742.1 CDS MC1_02750 NC_017044.1 484898 486133 R COG3307 Lipid A core - O-antigen ligase and related enzymes; Putative lipid A core - O-antigen ligase complement(484898..486133) Rickettsia parkeri str. Portsmouth 11995202 YP_005392743.1 CDS MC1_02755 NC_017044.1 486134 486607 R COG4765 Uncharacterized protein conserved in bacteria; hypothetical protein complement(486134..486607) Rickettsia parkeri str. Portsmouth 11995203 YP_005392744.1 CDS xerD NC_017044.1 488334 489254 D COG4974 Site-specific recombinase XerD; site-specific tyrosine recombinase XerD 488334..489254 Rickettsia parkeri str. Portsmouth 11995205 YP_005392745.1 CDS MC1_02780 NC_017044.1 489338 490357 D hypothetical protein 489338..490357 Rickettsia parkeri str. Portsmouth 11995206 YP_005392746.1 CDS MC1_02785 NC_017044.1 490469 491632 D hypothetical protein 490469..491632 Rickettsia parkeri str. Portsmouth 11995207 YP_005392747.1 CDS MC1_02790 NC_017044.1 491829 492611 R COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase complement(491829..492611) Rickettsia parkeri str. Portsmouth 11995208 YP_005392748.1 CDS lnt NC_017044.1 492687 494201 D COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 492687..494201 Rickettsia parkeri str. Portsmouth 11995209 YP_005392749.1 CDS MC1_02800 NC_017044.1 494379 494750 R hypothetical protein complement(494379..494750) Rickettsia parkeri str. Portsmouth 11995210 YP_005392750.1 CDS MC1_02805 NC_017044.1 494891 495694 D COG3023 Negative regulator of beta-lactamase expression; negative regulator of beta-lactamase expression 494891..495694 Rickettsia parkeri str. Portsmouth 11995211 YP_005392751.1 CDS MC1_02810 NC_017044.1 496306 497223 D COG2984 ABC-type uncharacterized transport system, periplasmic component; ABC transporter periplasmic protein 496306..497223 Rickettsia parkeri str. Portsmouth 11995212 YP_005392752.1 CDS MC1_02815 NC_017044.1 497228 498067 D COG4120 ABC-type uncharacterized transport system, permease component; ABC transporter permease 497228..498067 Rickettsia parkeri str. Portsmouth 11995213 YP_005392753.1 CDS MC1_02820 NC_017044.1 498064 498786 D COG1101 ABC-type uncharacterized transport system, ATPase component; ABC transporter ATP-binding protein 498064..498786 Rickettsia parkeri str. Portsmouth 11995214 YP_005392754.1 CDS MC1_02825 NC_017044.1 498866 499282 R hypothetical protein complement(498866..499282) Rickettsia parkeri str. Portsmouth 11995215 YP_005392755.1 CDS MC1_02830 NC_017044.1 499511 499717 R COG0666 FOG: Ankyrin repeat; hypothetical protein complement(499511..499717) Rickettsia parkeri str. Portsmouth 11995216 YP_005392756.1 CDS MC1_02835 NC_017044.1 499726 499857 R COG0666 FOG: Ankyrin repeat; hypothetical protein complement(499726..499857) Rickettsia parkeri str. Portsmouth 11995217 YP_005392757.1 CDS MC1_02840 NC_017044.1 499991 500122 D hypothetical protein 499991..500122 Rickettsia parkeri str. Portsmouth 11995218 YP_005392758.1 CDS MC1_02845 NC_017044.1 500091 500243 R hypothetical protein complement(500091..500243) Rickettsia parkeri str. Portsmouth 11995219 YP_005392759.1 CDS MC1_02850 NC_017044.1 500342 500437 R ankyrin repeat-containing protein complement(500342..500437) Rickettsia parkeri str. Portsmouth 11995220 YP_005392760.1 CDS MC1_02855 NC_017044.1 500594 501112 R COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein DsbB complement(500594..501112) Rickettsia parkeri str. Portsmouth 11995221 YP_005392761.1 CDS lysK NC_017044.1 501291 502859 D COG1384 Lysyl-tRNA synthetase (class I); lysyl-tRNA synthetase 501291..502859 Rickettsia parkeri str. Portsmouth 11995222 YP_005392762.1 CDS MC1_02865 NC_017044.1 502993 503925 D COG0679 Predicted permeases; Putative permease 502993..503925 Rickettsia parkeri str. Portsmouth 11995223 YP_005392763.1 CDS MC1_02870 NC_017044.1 504065 506368 D COG0281 Malic enzyme; bifunctional malic enzyme oxidoreductase/phosphotransacetylase 504065..506368 Rickettsia parkeri str. Portsmouth 11995224 YP_005392764.1 CDS MC1_02875 NC_017044.1 507033 507263 D protein transport protein sec7 507033..507263 Rickettsia parkeri str. Portsmouth 11995225 YP_005392765.1 CDS MC1_02880 NC_017044.1 507479 507865 R COG4374 Uncharacterized protein conserved in bacteria; hypothetical protein complement(507479..507865) Rickettsia parkeri str. Portsmouth 11995226 YP_005392766.1 CDS MC1_02885 NC_017044.1 507858 508106 R COG2002 Regulators of stationary/sporulation gene expression; Transcriptional regulator, AbrB family protein complement(507858..508106) Rickettsia parkeri str. Portsmouth 11995227 YP_005392767.1 CDS MC1_02890 NC_017044.1 508343 509560 D COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 508343..509560 Rickettsia parkeri str. Portsmouth 11995228 YP_005392768.1 CDS MC1_02895 NC_017044.1 509761 509946 R hypothetical protein complement(509761..509946) Rickettsia parkeri str. Portsmouth 11995229 YP_005392769.1 CDS MC1_02900 NC_017044.1 510082 510429 R hypothetical protein complement(510082..510429) Rickettsia parkeri str. Portsmouth 11995230 YP_005392770.1 CDS MC1_02905 NC_017044.1 510537 510665 R hypothetical protein complement(510537..510665) Rickettsia parkeri str. Portsmouth 11995231 YP_005392771.1 CDS MC1_02910 NC_017044.1 510822 511337 R hypothetical protein complement(510822..511337) Rickettsia parkeri str. Portsmouth 11995232 YP_005392772.1 CDS MC1_02915 NC_017044.1 511279 511728 R hypothetical protein complement(511279..511728) Rickettsia parkeri str. Portsmouth 11995233 YP_005392773.1 CDS MC1_02930 NC_017044.1 512831 512950 R hypothetical protein complement(512831..512950) Rickettsia parkeri str. Portsmouth 11995234 YP_005392774.1 CDS MC1_02935 NC_017044.1 513083 514027 R COG0039 Malate/lactate dehydrogenases; malate dehydrogenase complement(513083..514027) Rickettsia parkeri str. Portsmouth 11995235 YP_005392775.1 CDS MC1_02940 NC_017044.1 514175 514399 D ankyrin repeat-containing protein 514175..514399 Rickettsia parkeri str. Portsmouth 11995236 YP_005392776.1 CDS MC1_02945 NC_017044.1 514574 514756 D ankyrin repeat-containing protein 514574..514756 Rickettsia parkeri str. Portsmouth 11995237 YP_005392777.1 CDS MC1_02950 NC_017044.1 515266 515604 D hypothetical protein 515266..515604 Rickettsia parkeri str. Portsmouth 11995238 YP_005392778.1 CDS MC1_02955 NC_017044.1 515531 517054 R COG3202 ATP/ADP translocase; ADP,ATP carrier protein complement(515531..517054) Rickettsia parkeri str. Portsmouth 11995239 YP_005392779.1 CDS pyrG NC_017044.1 517263 518876 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(517263..518876) Rickettsia parkeri str. Portsmouth 11995240 YP_005392780.1 CDS MC1_02965 NC_017044.1 518879 519619 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(518879..519619) Rickettsia parkeri str. Portsmouth 11995241 YP_005392781.1 CDS MC1_02970 NC_017044.1 520107 520283 D COG5304 Uncharacterized protein conserved in bacteria; hypothetical protein 520107..520283 Rickettsia parkeri str. Portsmouth 11995244 YP_005392782.1 CDS MC1_02975 NC_017044.1 520376 520666 R COG1051 ADP-ribose pyrophosphatase; ADP-ribose pyrophosphatase MutT complement(520376..520666) Rickettsia parkeri str. Portsmouth 11995245 YP_005392783.1 CDS MC1_02980 NC_017044.1 520833 522356 D hypothetical protein 520833..522356 Rickettsia parkeri str. Portsmouth 11995246 YP_005392784.1 CDS folE NC_017044.1 522349 522918 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 522349..522918 Rickettsia parkeri str. Portsmouth 11995247 YP_005392785.1 CDS MC1_02990 NC_017044.1 523049 524329 D COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase 523049..524329 Rickettsia parkeri str. Portsmouth 11995248 YP_005392786.1 CDS MC1_02995 NC_017044.1 524542 525510 D COG3177 Uncharacterized conserved protein; Cell filamentation protein Fic 524542..525510 Rickettsia parkeri str. Portsmouth 11995249 YP_005392787.1 CDS MC1_03000 NC_017044.1 525701 525907 D hypothetical protein 525701..525907 Rickettsia parkeri str. Portsmouth 11995250 YP_005392788.1 CDS ruvA NC_017044.1 525912 526523 D COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 525912..526523 Rickettsia parkeri str. Portsmouth 11995251 YP_005392789.1 CDS MC1_03010 NC_017044.1 527158 527346 D hypothetical protein 527158..527346 Rickettsia parkeri str. Portsmouth 11995252 YP_005392790.1 CDS ruvB NC_017044.1 527522 528550 D COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 527522..528550 Rickettsia parkeri str. Portsmouth 11995253 YP_005392791.1 CDS MC1_03020 NC_017044.1 528543 530306 D COG1132 ABC-type multidrug transport system, ATPase and permease components; Multidrug resistance protein 528543..530306 Rickettsia parkeri str. Portsmouth 11995254 YP_005392792.1 CDS MC1_03025 NC_017044.1 530500 531744 D COG0477 Permeases of the major facilitator superfamily; AmpG protein 530500..531744 Rickettsia parkeri str. Portsmouth 11995255 YP_005392793.1 CDS MC1_03030 NC_017044.1 531921 532841 D COG1686 D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein dacF 531921..532841 Rickettsia parkeri str. Portsmouth 11995256 YP_005392794.1 CDS MC1_03035 NC_017044.1 533011 533973 R COG0797 Lipoproteins; rare lipoprotein A complement(533011..533973) Rickettsia parkeri str. Portsmouth 11995257 YP_005392795.1 CDS MC1_03040 NC_017044.1 533951 534568 R COG2823 Predicted periplasmic or secreted lipoprotein; hypothetical protein complement(533951..534568) Rickettsia parkeri str. Portsmouth 11995258 YP_005392796.1 CDS MC1_03045 NC_017044.1 534801 535343 R COG2917 Intracellular septation protein A; intracellular septation protein A complement(534801..535343) Rickettsia parkeri str. Portsmouth 11995259 YP_005392797.1 CDS MC1_03050 NC_017044.1 535373 536221 R COG0672 High-affinity Fe2+/Pb2+ permease; high-affinity iron permease complement(535373..536221) Rickettsia parkeri str. Portsmouth 11995260 YP_005392798.1 CDS MC1_03055 NC_017044.1 536231 536611 R hypothetical protein complement(536231..536611) Rickettsia parkeri str. Portsmouth 11995261 YP_005392799.1 CDS MC1_03060 NC_017044.1 536818 537813 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; hypothetical protein complement(536818..537813) Rickettsia parkeri str. Portsmouth 11995262 YP_005392800.1 CDS MC1_03065 NC_017044.1 537954 538580 D COG3485 Protocatechuate 3,4-dioxygenase beta subunit; protocatechuate-3,4-dioxygenase subunit beta 537954..538580 Rickettsia parkeri str. Portsmouth 11995263 YP_005392801.1 CDS MC1_03070 NC_017044.1 538818 539432 D COG0526 Thiol-disulfide isomerase and thioredoxins; Thiol:disulfide interchange protein tlpA 538818..539432 Rickettsia parkeri str. Portsmouth 11995264 YP_005392802.1 CDS MC1_03075 NC_017044.1 539597 540511 D COG0616 Periplasmic serine proteases (ClpP class); signal peptide peptidase 539597..540511 Rickettsia parkeri str. Portsmouth 11995265 YP_005392803.1 CDS dut NC_017044.1 540513 540959 D COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 540513..540959 Rickettsia parkeri str. Portsmouth 11995266 YP_005392804.1 CDS MC1_03085 NC_017044.1 541176 543137 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); soluble lytic murein transglycosylase precursor 541176..543137 Rickettsia parkeri str. Portsmouth 11995267 YP_005392805.1 CDS MC1_03090 NC_017044.1 543224 544183 D hypothetical protein 543224..544183 Rickettsia parkeri str. Portsmouth 11995268 YP_005392806.1 CDS MC1_03095 NC_017044.1 544377 545324 D COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; microcin C7 self-immunity protein 544377..545324 Rickettsia parkeri str. Portsmouth 11995269 YP_005392807.1 CDS MC1_03100 NC_017044.1 545504 548020 R COG2887 RecB family exonuclease; hypothetical protein complement(545504..548020) Rickettsia parkeri str. Portsmouth 11995270 YP_005392808.1 CDS MC1_03105 NC_017044.1 548170 548571 D hypothetical protein 548170..548571 Rickettsia parkeri str. Portsmouth 11995271 YP_005392809.1 CDS MC1_03110 NC_017044.1 548575 549303 R COG2071 Predicted glutamine amidotransferases; putative glutamine amidotransferase complement(548575..549303) Rickettsia parkeri str. Portsmouth 11995272 YP_005392810.1 CDS MC1_03115 NC_017044.1 549512 551110 R COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome c oxidase polypeptide I complement(549512..551110) Rickettsia parkeri str. Portsmouth 11995273 YP_005392811.1 CDS MC1_03120 NC_017044.1 551116 551499 R COG0110 Acetyltransferase (isoleucine patch superfamily); Acetyltransferase complement(551116..551499) Rickettsia parkeri str. Portsmouth 11995274 YP_005392812.1 CDS MC1_03125 NC_017044.1 551692 552639 R COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome c oxidase polypeptide II complement(551692..552639) Rickettsia parkeri str. Portsmouth 11995275 YP_005392813.1 CDS MC1_03130 NC_017044.1 552810 553229 R COG0615 Cytidylyltransferase; Glycerol-3-phosphate cytidyltransferase TagD complement(552810..553229) Rickettsia parkeri str. Portsmouth 11995276 YP_005392814.1 CDS MC1_03135 NC_017044.1 553462 554826 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 553462..554826 Rickettsia parkeri str. Portsmouth 11995277 YP_005392815.1 CDS lspA NC_017044.1 555020 555625 D COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 555020..555625 Rickettsia parkeri str. Portsmouth 11995278 YP_005392816.1 CDS MC1_03145 NC_017044.1 555778 556026 D hypothetical protein 555778..556026 Rickettsia parkeri str. Portsmouth 11995279 YP_005392817.1 CDS murD NC_017044.1 556197 557699 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 556197..557699 Rickettsia parkeri str. Portsmouth 11995280 YP_005392818.1 CDS MC1_03155 NC_017044.1 557831 558964 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 557831..558964 Rickettsia parkeri str. Portsmouth 11995281 YP_005392819.1 CDS murG NC_017044.1 558961 560091 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 558961..560091 Rickettsia parkeri str. Portsmouth 11995282 YP_005392820.1 CDS MC1_03165 NC_017044.1 560486 561136 D hypothetical protein 560486..561136 Rickettsia parkeri str. Portsmouth 11995283 YP_005392821.1 CDS MC1_03170 NC_017044.1 561279 561386 D hypothetical protein 561279..561386 Rickettsia parkeri str. Portsmouth 11995284 YP_005392822.1 CDS MC1_03175 NC_017044.1 561415 561531 D hypothetical protein 561415..561531 Rickettsia parkeri str. Portsmouth 11995285 YP_005392823.1 CDS MC1_03180 NC_017044.1 561632 561871 D hypothetical protein 561632..561871 Rickettsia parkeri str. Portsmouth 11995286 YP_005392824.1 CDS MC1_03195 NC_017044.1 563009 563455 R COG0841 Cation/multidrug efflux pump; RND efflux transporter complement(563009..563455) Rickettsia parkeri str. Portsmouth 11995287 YP_005392825.1 CDS MC1_03200 NC_017044.1 563503 563820 R COG0841 Cation/multidrug efflux pump; RND efflux transporter complement(563503..563820) Rickettsia parkeri str. Portsmouth 11995288 YP_005392826.1 CDS MC1_03205 NC_017044.1 564181 564696 R COG0841 Cation/multidrug efflux pump; RND family efflux transporter complement(564181..564696) Rickettsia parkeri str. Portsmouth 11995289 YP_005392827.1 CDS MC1_03210 NC_017044.1 564789 565007 R COG0841 Cation/multidrug efflux pump; RND efflux transporter complement(564789..565007) Rickettsia parkeri str. Portsmouth 11995290 YP_005392828.1 CDS MC1_03215 NC_017044.1 565062 565157 R COG0841 Cation/multidrug efflux pump; RND family efflux transporter complement(565062..565157) Rickettsia parkeri str. Portsmouth 11995291 YP_005392829.1 CDS MC1_03230 NC_017044.1 566141 566359 R COG0845 Membrane-fusion protein; hypothetical protein complement(566141..566359) Rickettsia parkeri str. Portsmouth 11995292 YP_005392830.1 CDS MC1_03245 NC_017044.1 567732 568748 R COG0438 Glycosyltransferase; Glycosyltransferase complement(567732..568748) Rickettsia parkeri str. Portsmouth 11995293 YP_005392831.1 CDS MC1_03265 NC_017044.1 569440 569634 R hypothetical protein complement(569440..569634) Rickettsia parkeri str. Portsmouth 11995294 YP_005392832.1 CDS dapF NC_017044.1 569723 570535 D COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 569723..570535 Rickettsia parkeri str. Portsmouth 11995295 YP_005392833.1 CDS MC1_03275 NC_017044.1 570510 571775 D COG0621 2-methylthioadenine synthetase; tRNA 2-methylthioadenosine synthase-like protein 570510..571775 Rickettsia parkeri str. Portsmouth 11995296 YP_005392834.1 CDS pheS NC_017044.1 572016 573065 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 572016..573065 Rickettsia parkeri str. Portsmouth 11995297 YP_005392835.1 CDS pheT NC_017044.1 573062 575518 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 573062..575518 Rickettsia parkeri str. Portsmouth 11995298 YP_005392836.1 CDS MC1_03290 NC_017044.1 575523 576662 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 575523..576662 Rickettsia parkeri str. Portsmouth 11995299 YP_005392837.1 CDS MC1_03295 NC_017044.1 576668 576790 D hypothetical protein 576668..576790 Rickettsia parkeri str. Portsmouth 11995300 YP_005392838.1 CDS MC1_03300 NC_017044.1 576756 576860 D DnaJ family molecular chaperone 576756..576860 Rickettsia parkeri str. Portsmouth 11995301 YP_005392839.1 CDS MC1_03305 NC_017044.1 577023 577526 D hypothetical protein 577023..577526 Rickettsia parkeri str. Portsmouth 11995302 YP_005392840.1 CDS leuS NC_017044.1 577654 580161 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 577654..580161 Rickettsia parkeri str. Portsmouth 11995303 YP_005392841.1 CDS MC1_03315 NC_017044.1 580681 580815 R hypothetical protein complement(580681..580815) Rickettsia parkeri str. Portsmouth 11995304 YP_005392842.1 CDS MC1_03320 NC_017044.1 580862 581008 R hypothetical protein complement(580862..581008) Rickettsia parkeri str. Portsmouth 11995305 YP_005392843.1 CDS MC1_03325 NC_017044.1 581248 581859 R COG0349 Ribonuclease D; Ribonuclease D complement(581248..581859) Rickettsia parkeri str. Portsmouth 11995306 YP_005392844.1 CDS MC1_03330 NC_017044.1 582010 582315 R COG2919 Septum formation initiator; septum formation initiator complement(582010..582315) Rickettsia parkeri str. Portsmouth 11995307 YP_005392845.1 CDS MC1_03335 NC_017044.1 582296 583006 R COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase complement(582296..583006) Rickettsia parkeri str. Portsmouth 11995308 YP_005392846.1 CDS MC1_03340 NC_017044.1 582966 583646 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthetase complement(582966..583646) Rickettsia parkeri str. Portsmouth 11995309 YP_005392847.1 CDS MC1_03345 NC_017044.1 583819 585249 R COG0642 Signal transduction histidine kinase; osmolarity sensor protein EnvZ complement(583819..585249) Rickettsia parkeri str. Portsmouth 11995310 YP_005392848.1 CDS MC1_03350 NC_017044.1 585233 585913 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; PetR complement(585233..585913) Rickettsia parkeri str. Portsmouth 11995311 YP_005392849.1 CDS MC1_03355 NC_017044.1 586129 587001 D COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase 586129..587001 Rickettsia parkeri str. Portsmouth 11995312 YP_005392850.1 CDS MC1_03360 NC_017044.1 587187 588071 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 587187..588071 Rickettsia parkeri str. Portsmouth 11995313 YP_005392851.1 CDS smpB NC_017044.1 588068 588526 D COG0691 tmRNA-binding protein; SsrA-binding protein 588068..588526 Rickettsia parkeri str. Portsmouth 11995314 YP_005392852.1 CDS MC1_03370 NC_017044.1 588659 589450 D COG1651 Protein-disulfide isomerase; Thiol:disulfide interchange protein dsbA 588659..589450 Rickettsia parkeri str. Portsmouth 11995315 YP_005392853.1 CDS MC1_03375 NC_017044.1 589683 590561 R COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(589683..590561) Rickettsia parkeri str. Portsmouth 11995316 YP_005392854.1 CDS sucC NC_017044.1 590737 591897 R COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(590737..591897) Rickettsia parkeri str. Portsmouth 11995317 YP_005392855.1 CDS MC1_03385 NC_017044.1 591930 592319 R contains PIN domain; COG5611 Predicted nucleic-acid-binding protein, contains PIN domain; Putative nucleic-acid-binding protein complement(591930..592319) Rickettsia parkeri str. Portsmouth 11995318 YP_005392856.1 CDS MC1_03390 NC_017044.1 592306 592557 R COG2002 Regulators of stationary/sporulation gene expression; hypothetical protein complement(592306..592557) Rickettsia parkeri str. Portsmouth 11995319 YP_005392857.1 CDS MC1_03395 NC_017044.1 592642 592875 R COG3038 Cytochrome B561; hypothetical protein complement(592642..592875) Rickettsia parkeri str. Portsmouth 11995320 YP_005392858.1 CDS MC1_03400 NC_017044.1 592875 593171 R hypothetical protein complement(592875..593171) Rickettsia parkeri str. Portsmouth 11995321 YP_005392859.1 CDS MC1_03405 NC_017044.1 593338 595368 R COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; acylamino acid-releasing protein complement(593338..595368) Rickettsia parkeri str. Portsmouth 11995322 YP_005392860.1 CDS MC1_03410 NC_017044.1 595456 596091 R COG4395 Uncharacterized protein conserved in bacteria; hypothetical protein complement(595456..596091) Rickettsia parkeri str. Portsmouth 11995323 YP_005392861.1 CDS MC1_03415 NC_017044.1 596594 596962 R COG0605 Superoxide dismutase; hypothetical protein complement(596594..596962) Rickettsia parkeri str. Portsmouth 11995324 YP_005392862.1 CDS MC1_03420 NC_017044.1 597114 597341 R COG1835 Predicted acyltransferases; hypothetical protein complement(597114..597341) Rickettsia parkeri str. Portsmouth 11995325 YP_005392863.1 CDS rbfA NC_017044.1 597518 597880 R COG0858 Ribosome-binding factor A; ribosome-binding factor A complement(597518..597880) Rickettsia parkeri str. Portsmouth 11995326 YP_005392864.1 CDS MC1_03430 NC_017044.1 597877 598311 R COG1238 Predicted membrane protein; hypothetical protein complement(597877..598311) Rickettsia parkeri str. Portsmouth 11995327 YP_005392865.1 CDS MC1_03435 NC_017044.1 598454 598975 D COG1714 Predicted membrane protein/domain; RDD family protein 598454..598975 Rickettsia parkeri str. Portsmouth 11995328 YP_005392866.1 CDS recR NC_017044.1 599133 599738 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 599133..599738 Rickettsia parkeri str. Portsmouth 11995329 YP_005392867.1 CDS MC1_03445 NC_017044.1 599921 600052 R hypothetical protein complement(599921..600052) Rickettsia parkeri str. Portsmouth 11995330 YP_005392868.1 CDS MC1_03450 NC_017044.1 600904 601158 R hypothetical protein complement(600904..601158) Rickettsia parkeri str. Portsmouth 11995331 YP_005392869.1 CDS ppnK NC_017044.1 601486 602253 R COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase complement(601486..602253) Rickettsia parkeri str. Portsmouth 11995332 YP_005392870.1 CDS MC1_03460 NC_017044.1 602340 604022 D COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily; Putative hydrolase of the metallo-beta-lactamase superfamily protein 602340..604022 Rickettsia parkeri str. Portsmouth 11995333 YP_005392871.1 CDS gpsA NC_017044.1 604269 605246 D COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 604269..605246 Rickettsia parkeri str. Portsmouth 11995334 YP_005392872.1 CDS MC1_03470 NC_017044.1 605471 606400 D COG0679 Predicted permeases; permease 605471..606400 Rickettsia parkeri str. Portsmouth 11995335 YP_005392873.1 CDS MC1_03475 NC_017044.1 606469 607341 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Putative hydrolase/acyltransferase 606469..607341 Rickettsia parkeri str. Portsmouth 11995336 YP_005392874.1 CDS MC1_03480 NC_017044.1 607541 608473 D COG0492 Thioredoxin reductase; thioredoxin reductase 607541..608473 Rickettsia parkeri str. Portsmouth 11995337 YP_005392875.1 CDS MC1_03485 NC_017044.1 608693 608989 D COG0447 Dihydroxynaphthoic acid synthase; hypothetical protein 608693..608989 Rickettsia parkeri str. Portsmouth 11995338 YP_005392876.1 CDS MC1_03490 NC_017044.1 609051 609170 D hypothetical protein 609051..609170 Rickettsia parkeri str. Portsmouth 11995339 YP_005392877.1 CDS MC1_03495 NC_017044.1 609310 609519 D hypothetical protein 609310..609519 Rickettsia parkeri str. Portsmouth 11995340 YP_005392878.1 CDS MC1_03525 NC_017044.1 611564 612409 D COG0463 Glycosyltransferases involved in cell wall biogenesis; Glycosyl transferase 611564..612409 Rickettsia parkeri str. Portsmouth 11995341 YP_005392879.1 CDS MC1_03530 NC_017044.1 612487 614448 D COG0210 Superfamily I DNA and RNA helicases; DNA helicase II 612487..614448 Rickettsia parkeri str. Portsmouth 11995342 YP_005392880.1 CDS MC1_03535 NC_017044.1 614514 615110 D hypothetical protein 614514..615110 Rickettsia parkeri str. Portsmouth 11995343 YP_005392881.1 CDS MC1_03540 NC_017044.1 615226 615381 D hypothetical protein 615226..615381 Rickettsia parkeri str. Portsmouth 11995344 YP_005392882.1 CDS MC1_03545 NC_017044.1 615475 616827 D hypothetical protein 615475..616827 Rickettsia parkeri str. Portsmouth 11995345 YP_005392883.1 CDS MC1_03550 NC_017044.1 617004 618035 R COG1171 Threonine dehydratase; threonine dehydratase complement(617004..618035) Rickettsia parkeri str. Portsmouth 11995346 YP_005392884.1 CDS MC1_03555 NC_017044.1 618121 620457 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 618121..620457 Rickettsia parkeri str. Portsmouth 11995347 YP_005392885.1 CDS MC1_03560 NC_017044.1 621141 621368 D cell surface antigen Sca3 621141..621368 Rickettsia parkeri str. Portsmouth 11995348 YP_005392886.1 CDS MC1_03565 NC_017044.1 622686 622901 R hypothetical protein complement(622686..622901) Rickettsia parkeri str. Portsmouth 11995349 YP_005392887.1 CDS MC1_03570 NC_017044.1 622927 623019 D hypothetical protein 622927..623019 Rickettsia parkeri str. Portsmouth 11995350 YP_005392888.1 CDS MC1_03575 NC_017044.1 623877 624185 D hypothetical protein 623877..624185 Rickettsia parkeri str. Portsmouth 11995352 YP_005392889.1 CDS MC1_03580 NC_017044.1 624302 624880 D COG1544 Ribosome-associated protein Y (PSrp-1); Putative sigma(54) modulation protein 624302..624880 Rickettsia parkeri str. Portsmouth 11995353 YP_005392890.1 CDS MC1_03585 NC_017044.1 624880 625356 D COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; isoleucine patch superfamily carbonic anhydrase/acetyltransferase 624880..625356 Rickettsia parkeri str. Portsmouth 11995354 YP_005392891.1 CDS MC1_03590 NC_017044.1 625400 626266 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(625400..626266) Rickettsia parkeri str. Portsmouth 11995355 YP_005392892.1 CDS MC1_03595 NC_017044.1 626403 627425 R COG0492 Thioredoxin reductase; thioredoxin reductase complement(626403..627425) Rickettsia parkeri str. Portsmouth 11995356 YP_005392893.1 CDS MC1_03600 NC_017044.1 627549 627647 R hypothetical protein complement(627549..627647) Rickettsia parkeri str. Portsmouth 11995357 YP_005392894.1 CDS MC1_03630 NC_017044.1 630254 630547 D COG5430 Uncharacterized secreted protein; hypothetical protein 630254..630547 Rickettsia parkeri str. Portsmouth 11995358 YP_005392895.1 CDS MC1_03635 NC_017044.1 630695 631012 D hypothetical protein 630695..631012 Rickettsia parkeri str. Portsmouth 11995359 YP_005392896.1 CDS MC1_03640 NC_017044.1 631071 631322 D COG3397 Uncharacterized protein conserved in bacteria; chitin binding domain-containing protein 631071..631322 Rickettsia parkeri str. Portsmouth 11995360 YP_005392897.1 CDS MC1_03645 NC_017044.1 631740 633563 D COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 631740..633563 Rickettsia parkeri str. Portsmouth 11995361 YP_005392898.1 CDS nrdF NC_017044.1 634408 635394 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 634408..635394 Rickettsia parkeri str. Portsmouth 11995362 YP_005392899.1 CDS MC1_03670 NC_017044.1 635539 638388 D COG1357 Uncharacterized low-complexity proteins; hypothetical protein 635539..638388 Rickettsia parkeri str. Portsmouth 11995363 YP_005392900.1 CDS MC1_03675 NC_017044.1 639413 639784 D hypothetical protein 639413..639784 Rickettsia parkeri str. Portsmouth 11995364 YP_005392901.1 CDS MC1_03680 NC_017044.1 640004 640522 D COG0516 IMP dehydrogenase/GMP reductase; hypothetical protein 640004..640522 Rickettsia parkeri str. Portsmouth 11995365 YP_005392902.1 CDS miaA NC_017044.1 640496 641587 R COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(640496..641587) Rickettsia parkeri str. Portsmouth 11995366 YP_005392903.1 CDS MC1_03690 NC_017044.1 642120 643508 R COG1109 Phosphomannomutase; phosphomannomutase complement(642120..643508) Rickettsia parkeri str. Portsmouth 11995367 YP_005392904.1 CDS MC1_03695 NC_017044.1 643534 643677 D hypothetical protein 643534..643677 Rickettsia parkeri str. Portsmouth 11995368 YP_005392905.1 CDS MC1_03700 NC_017044.1 643679 644401 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(643679..644401) Rickettsia parkeri str. Portsmouth 11995369 YP_005392906.1 CDS MC1_03705 NC_017044.1 644588 645172 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(644588..645172) Rickettsia parkeri str. Portsmouth 11995370 YP_005392907.1 CDS MC1_03710 NC_017044.1 645141 645731 R COG5375 Uncharacterized protein conserved in bacteria; hypothetical protein complement(645141..645731) Rickettsia parkeri str. Portsmouth 11995371 YP_005392908.1 CDS MC1_03715 NC_017044.1 645737 646696 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; KpsF complement(645737..646696) Rickettsia parkeri str. Portsmouth 11995372 YP_005392909.1 CDS MC1_03720 NC_017044.1 646896 649142 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(646896..649142) Rickettsia parkeri str. Portsmouth 11995373 YP_005392910.1 CDS rpsO NC_017044.1 649290 649565 R COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 complement(649290..649565) Rickettsia parkeri str. Portsmouth 11995374 YP_005392911.1 CDS truB NC_017044.1 649601 650638 R COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B complement(649601..650638) Rickettsia parkeri str. Portsmouth 11995375 YP_005392912.1 CDS MC1_03735 NC_017044.1 650725 652260 D COG3202 ATP/ADP translocase; ADP,ATP carrier protein 650725..652260 Rickettsia parkeri str. Portsmouth 11995376 YP_005392913.1 CDS MC1_03740 NC_017044.1 652552 655623 D antigenic heat-stable 120 kDa protein (cell surface protein Sca4) 652552..655623 Rickettsia parkeri str. Portsmouth 11995377 YP_005392914.1 CDS MC1_03745 NC_017044.1 655742 656119 R COG1396 Predicted transcriptional regulators; Putative transcriptional regulator complement(655742..656119) Rickettsia parkeri str. Portsmouth 11995378 YP_005392915.1 CDS MC1_03750 NC_017044.1 656643 657470 D COG1295 Predicted membrane protein; ribonuclease BN 656643..657470 Rickettsia parkeri str. Portsmouth 11995379 YP_005392916.1 CDS MC1_03755 NC_017044.1 657620 658453 R COG0174 Glutamine synthetase; glutamine synthetase complement(657620..658453) Rickettsia parkeri str. Portsmouth 11995380 YP_005392917.1 CDS MC1_03760 NC_017044.1 658452 659174 D COG1496 Uncharacterized conserved protein; putative cytoplasmic protein 658452..659174 Rickettsia parkeri str. Portsmouth 11995381 YP_005392918.1 CDS MC1_03765 NC_017044.1 659467 660018 D COG0242 N-formylmethionyl-tRNA deformylase; polypeptide deformylase 659467..660018 Rickettsia parkeri str. Portsmouth 11995382 YP_005392919.1 CDS MC1_03770 NC_017044.1 660490 660894 D COG4113 Predicted nucleic acid-binding protein, contains PIN domain; Toxin of toxin-antitoxin (TA) system, containing PIN domain for nucleic acid binding protein 660490..660894 Rickettsia parkeri str. Portsmouth 11995383 YP_005392920.1 CDS MC1_03775 NC_017044.1 660895 661590 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein complement(660895..661590) Rickettsia parkeri str. Portsmouth 11995384 YP_005392921.1 CDS MC1_03780 NC_017044.1 661827 663635 R hypothetical protein complement(661827..663635) Rickettsia parkeri str. Portsmouth 11995385 YP_005392922.1 CDS MC1_03785 NC_017044.1 663535 663651 D hypothetical protein 663535..663651 Rickettsia parkeri str. Portsmouth 11995386 YP_005392923.1 CDS MC1_03790 NC_017044.1 663820 666456 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; pyruvate phosphate dikinase complement(663820..666456) Rickettsia parkeri str. Portsmouth 11995387 YP_005392924.1 CDS MC1_03795 NC_017044.1 667383 668051 D COG0625 Glutathione S-transferase; glutathione S-transferase 667383..668051 Rickettsia parkeri str. Portsmouth 11995388 YP_005392925.1 CDS MC1_03800 NC_017044.1 668163 668915 R COG4285 Uncharacterized conserved protein; N-terminal of biotin-protein ligase complement(668163..668915) Rickettsia parkeri str. Portsmouth 11995389 YP_005392926.1 CDS MC1_03805 NC_017044.1 668991 669533 D COG1268 Uncharacterized conserved protein; BioY family protein 668991..669533 Rickettsia parkeri str. Portsmouth 11995390 YP_005392927.1 CDS MC1_03810 NC_017044.1 669786 671066 D COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 669786..671066 Rickettsia parkeri str. Portsmouth 11995391 YP_005392928.1 CDS MC1_03815 NC_017044.1 671237 671866 D COG0605 Superoxide dismutase; superoxide dismutase 671237..671866 Rickettsia parkeri str. Portsmouth 11995392 YP_005392929.1 CDS MC1_03845 NC_017044.1 673781 674593 D COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase 673781..674593 Rickettsia parkeri str. Portsmouth 11995393 YP_005392930.1 CDS MC1_03850 NC_017044.1 674648 674836 D hypothetical protein 674648..674836 Rickettsia parkeri str. Portsmouth 11995394 YP_005392931.1 CDS MC1_03855 NC_017044.1 674864 675535 D COG5448 Uncharacterized conserved protein; hypothetical protein 674864..675535 Rickettsia parkeri str. Portsmouth 11995395 YP_005392932.1 CDS MC1_03860 NC_017044.1 675532 675684 D hypothetical protein 675532..675684 Rickettsia parkeri str. Portsmouth 11995396 YP_005392933.1 CDS MC1_03865 NC_017044.1 675830 676000 D COG5449 Uncharacterized conserved protein; hypothetical protein 675830..676000 Rickettsia parkeri str. Portsmouth 11995397 YP_005392934.1 CDS MC1_03870 NC_017044.1 676004 676177 D hypothetical protein 676004..676177 Rickettsia parkeri str. Portsmouth 11995398 YP_005392935.1 CDS MC1_03875 NC_017044.1 676164 676493 D COG5346 Predicted membrane protein; hypothetical protein 676164..676493 Rickettsia parkeri str. Portsmouth 11995399 YP_005392936.1 CDS infC NC_017044.1 676671 677117 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 676671..677117 Rickettsia parkeri str. Portsmouth 11995400 YP_005392937.1 CDS MC1_03885 NC_017044.1 677252 678490 D COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 677252..678490 Rickettsia parkeri str. Portsmouth 11995401 YP_005392938.1 CDS prfA NC_017044.1 678623 679690 D COG0216 Protein chain release factor A; peptide chain release factor 1 678623..679690 Rickettsia parkeri str. Portsmouth 11995402 YP_005392939.1 CDS MC1_03895 NC_017044.1 679918 681681 D COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 679918..681681 Rickettsia parkeri str. Portsmouth 11995403 YP_005392940.1 CDS MC1_03900 NC_017044.1 681730 683052 D COG0500 SAM-dependent methyltransferases; hypothetical protein 681730..683052 Rickettsia parkeri str. Portsmouth 11995404 YP_005392941.1 CDS rho NC_017044.1 683437 684813 D COG1158 Transcription termination factor; transcription termination factor Rho 683437..684813 Rickettsia parkeri str. Portsmouth 11995405 YP_005392942.1 CDS MC1_03910 NC_017044.1 684938 685852 D COG0616 Periplasmic serine proteases (ClpP class); signal peptide peptidase SppA 684938..685852 Rickettsia parkeri str. Portsmouth 11995406 YP_005392943.1 CDS MC1_03915 NC_017044.1 685855 686097 D COG0776 Bacterial nucleoid DNA-binding protein; Integration host factor beta-subunit 685855..686097 Rickettsia parkeri str. Portsmouth 11995407 YP_005392944.1 CDS MC1_03920 NC_017044.1 686104 686304 D hypothetical protein 686104..686304 Rickettsia parkeri str. Portsmouth 11995408 YP_005392945.1 CDS MC1_03925 NC_017044.1 686668 686859 D hypothetical protein 686668..686859 Rickettsia parkeri str. Portsmouth 11995409 YP_005392946.1 CDS MC1_03930 NC_017044.1 686862 687608 D COG3022 Uncharacterized protein conserved in bacteria; hypothetical protein 686862..687608 Rickettsia parkeri str. Portsmouth 11995410 YP_005392947.1 CDS MC1_03960 NC_017044.1 690337 690513 D hypothetical protein 690337..690513 Rickettsia parkeri str. Portsmouth 11995412 YP_005392948.1 CDS cmk NC_017044.1 690737 691396 D COG0283 Cytidylate kinase; cytidylate kinase 690737..691396 Rickettsia parkeri str. Portsmouth 11995413 YP_005392949.1 CDS rpsA NC_017044.1 691651 693357 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 691651..693357 Rickettsia parkeri str. Portsmouth 11995414 YP_005392950.1 CDS clpP NC_017044.1 693517 694122 D COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 693517..694122 Rickettsia parkeri str. Portsmouth 11995415 YP_005392951.1 CDS MC1_03990 NC_017044.1 696210 696518 R COG0338 Site-specific DNA methylase; site-specific DNA adenine methylase complement(696210..696518) Rickettsia parkeri str. Portsmouth 11995417 YP_005392952.1 CDS MC1_03995 NC_017044.1 697402 698313 D COG0642 Signal transduction histidine kinase; Signal transduction histidine kinase 697402..698313 Rickettsia parkeri str. Portsmouth 11995418 YP_005392953.1 CDS MC1_04000 NC_017044.1 698450 699130 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine polyphosphate pyrophosphohydrolase/synthetase 698450..699130 Rickettsia parkeri str. Portsmouth 11995419 YP_005392954.1 CDS MC1_04005 NC_017044.1 699600 702470 D COG0457 FOG: TPR repeat; hypothetical protein 699600..702470 Rickettsia parkeri str. Portsmouth 11995420 YP_005392955.1 CDS MC1_04010 NC_017044.1 702483 709154 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase SecA subunit-like protein 702483..709154 Rickettsia parkeri str. Portsmouth 11995421 YP_005392956.1 CDS MC1_04015 NC_017044.1 709338 709646 R conjugal transfer protein TraD complement(709338..709646) Rickettsia parkeri str. Portsmouth 11995422 YP_005392957.1 CDS MC1_04020 NC_017044.1 710065 711195 R COG3328 Transposase and inactivated derivatives; transposase complement(710065..711195) Rickettsia parkeri str. Portsmouth 11995423 YP_005392958.1 CDS MC1_04025 NC_017044.1 711603 711968 R COG3344 Retron-type reverse transcriptase; reverse transcriptase complement(711603..711968) Rickettsia parkeri str. Portsmouth 11995424 YP_005392959.1 CDS MC1_04030 NC_017044.1 712276 712383 R RNA-directed DNA polymerase complement(712276..712383) Rickettsia parkeri str. Portsmouth 11995425 YP_005392960.1 CDS MC1_04035 NC_017044.1 712487 713059 R COG3344 Retron-type reverse transcriptase; reverse transcriptase complement(712487..713059) Rickettsia parkeri str. Portsmouth 11995426 YP_005392961.1 CDS MC1_04040 NC_017044.1 713785 717921 D COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; conjugal transfer protein TraA 713785..717921 Rickettsia parkeri str. Portsmouth 11995427 YP_005392962.1 CDS MC1_04045 NC_017044.1 717933 718925 D transposase 717933..718925 Rickettsia parkeri str. Portsmouth 11995428 YP_005392963.1 CDS MC1_04050 NC_017044.1 719163 719666 R COG3505 Type IV secretory pathway, VirD4 components; putative conjugative transfer protein TraD complement(719163..719666) Rickettsia parkeri str. Portsmouth 11995429 YP_005392964.1 CDS MC1_04055 NC_017044.1 720422 720820 D conjugal transfer protein TraA 720422..720820 Rickettsia parkeri str. Portsmouth 11995430 YP_005392965.1 CDS MC1_04060 NC_017044.1 720858 721901 D transposase 720858..721901 Rickettsia parkeri str. Portsmouth 11995431 YP_005392966.1 CDS MC1_04065 NC_017044.1 722084 723778 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; conjugative transfer protein TraD complement(722084..723778) Rickettsia parkeri str. Portsmouth 11995432 YP_005392967.1 CDS MC1_04080 NC_017044.1 724964 725371 R conjugative transfer protein TraG complement(724964..725371) Rickettsia parkeri str. Portsmouth 11995433 YP_005392968.1 CDS MC1_04085 NC_017044.1 725338 726231 R F pilus assembly protein TraH complement(725338..726231) Rickettsia parkeri str. Portsmouth 11995434 YP_005392969.1 CDS MC1_04090 NC_017044.1 726221 726646 R COG0526 Thiol-disulfide isomerase and thioredoxins; F pilus assembly protein TraF complement(726221..726646) Rickettsia parkeri str. Portsmouth 11995435 YP_005392970.1 CDS MC1_04095 NC_017044.1 727400 727567 D hypothetical protein 727400..727567 Rickettsia parkeri str. Portsmouth 11995436 YP_005392971.1 CDS MC1_04100 NC_017044.1 727751 728779 D COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; isopentenyl pyrophosphate isomerase 727751..728779 Rickettsia parkeri str. Portsmouth 11995437 YP_005392972.1 CDS MC1_04105 NC_017044.1 728868 729089 R COG5628 Predicted acetyltransferase; Putative acetyltransferase complement(728868..729089) Rickettsia parkeri str. Portsmouth 11995438 YP_005392973.1 CDS MC1_04110 NC_017044.1 729123 729338 R hypothetical protein complement(729123..729338) Rickettsia parkeri str. Portsmouth 11995439 YP_005392974.1 CDS MC1_04115 NC_017044.1 729980 730276 R COG4804 Uncharacterized conserved protein; hypothetical protein complement(729980..730276) Rickettsia parkeri str. Portsmouth 11995440 YP_005392975.1 CDS MC1_04120 NC_017044.1 730599 730823 R hypothetical protein complement(730599..730823) Rickettsia parkeri str. Portsmouth 11995441 YP_005392976.1 CDS MC1_04125 NC_017044.1 731005 731172 D transposase-like protein 731005..731172 Rickettsia parkeri str. Portsmouth 11995442 YP_005392977.1 CDS MC1_04130 NC_017044.1 732047 732253 R hypothetical protein complement(732047..732253) Rickettsia parkeri str. Portsmouth 11995443 YP_005392978.1 CDS MC1_04135 NC_017044.1 732530 733348 D hypothetical protein 732530..733348 Rickettsia parkeri str. Portsmouth 11995444 YP_005392979.1 CDS MC1_04140 NC_017044.1 733352 733651 D hypothetical protein 733352..733651 Rickettsia parkeri str. Portsmouth 11995445 YP_005392980.1 CDS MC1_04145 NC_017044.1 733886 734305 D COG1959 Predicted transcriptional regulator; Rrf2 family protein 733886..734305 Rickettsia parkeri str. Portsmouth 11995446 YP_005392981.1 CDS MC1_04150 NC_017044.1 734302 735420 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; NifS-like protein 734302..735420 Rickettsia parkeri str. Portsmouth 11995447 YP_005392982.1 CDS MC1_04155 NC_017044.1 735523 736755 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 735523..736755 Rickettsia parkeri str. Portsmouth 11995448 YP_005392983.1 CDS MC1_04160 NC_017044.1 736907 737302 D COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 736907..737302 Rickettsia parkeri str. Portsmouth 11995449 YP_005392984.1 CDS MC1_04165 NC_017044.1 737306 737638 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly accessory protein 737306..737638 Rickettsia parkeri str. Portsmouth 11995450 YP_005392985.1 CDS MC1_04170 NC_017044.1 737668 737868 D hypothetical protein 737668..737868 Rickettsia parkeri str. Portsmouth 11995451 YP_005392986.1 CDS MC1_04175 NC_017044.1 738004 738147 D hypothetical protein 738004..738147 Rickettsia parkeri str. Portsmouth 11995452 YP_005392987.1 CDS MC1_04180 NC_017044.1 738311 738490 R COG0739 Membrane proteins related to metalloendopeptidases; lysozyme complement(738311..738490) Rickettsia parkeri str. Portsmouth 11995453 YP_005392988.1 CDS MC1_04185 NC_017044.1 738638 739921 D COG0531 Amino acid transporters; putrescine-ornithine antiporter 738638..739921 Rickettsia parkeri str. Portsmouth 11995454 YP_005392989.1 CDS MC1_04190 NC_017044.1 740113 741909 D COG0006 Xaa-Pro aminopeptidase; aminopeptidase P 740113..741909 Rickettsia parkeri str. Portsmouth 11995455 YP_005392990.1 CDS MC1_04195 NC_017044.1 742199 743182 R COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl-diphosphate synthase complement(742199..743182) Rickettsia parkeri str. Portsmouth 11995458 YP_005392991.1 CDS MC1_04200 NC_017044.1 743301 744959 R hypothetical protein complement(743301..744959) Rickettsia parkeri str. Portsmouth 11995459 YP_005392992.1 CDS MC1_04205 NC_017044.1 745153 746658 R COG3202 ATP/ADP translocase; ATP/ADP translocase complement(745153..746658) Rickettsia parkeri str. Portsmouth 11995460 YP_005392993.1 CDS MC1_04210 NC_017044.1 746727 746921 R lipopolysaccharide 1,2-glucosyltransferase RfaJ complement(746727..746921) Rickettsia parkeri str. Portsmouth 11995461 YP_005392994.1 CDS MC1_04215 NC_017044.1 747213 747350 D transposase-like protein 747213..747350 Rickettsia parkeri str. Portsmouth 11995462 YP_005392995.1 CDS MC1_04220 NC_017044.1 747347 747592 D COG5464 Uncharacterized conserved protein; hypothetical protein 747347..747592 Rickettsia parkeri str. Portsmouth 11995463 YP_005392996.1 CDS MC1_04225 NC_017044.1 747720 748973 D COG0477 Permeases of the major facilitator superfamily; AmpG protein 747720..748973 Rickettsia parkeri str. Portsmouth 11995464 YP_005392997.1 CDS MC1_04230 NC_017044.1 749439 750080 D COG1279 Lysine efflux permease; Lysine efflux permease 749439..750080 Rickettsia parkeri str. Portsmouth 11995465 YP_005392998.1 CDS MC1_04235 NC_017044.1 750058 750732 D COG1587 Uroporphyrinogen-III synthase; hypothetical protein 750058..750732 Rickettsia parkeri str. Portsmouth 11995466 YP_005392999.1 CDS MC1_04240 NC_017044.1 750716 751471 D hypothetical protein 750716..751471 Rickettsia parkeri str. Portsmouth 11995467 YP_005393000.1 CDS MC1_04245 NC_017044.1 751464 752468 D COG2956 Predicted N-acetylglucosaminyl transferase; HemY-like protein 751464..752468 Rickettsia parkeri str. Portsmouth 11995468 YP_005393001.1 CDS MC1_04250 NC_017044.1 752698 753417 R COG2945 Predicted hydrolase of the alpha/beta superfamily; alpha/beta hydrolase complement(752698..753417) Rickettsia parkeri str. Portsmouth 11995469 YP_005393002.1 CDS MC1_04255 NC_017044.1 753648 753785 D COG3077 DNA-damage-inducible protein J; DNA-damage-inducible protein J 753648..753785 Rickettsia parkeri str. Portsmouth 11995470 YP_005393003.1 CDS MC1_04260 NC_017044.1 754067 754507 R COG5622 Protein required for attachment to host cells; AtsE-like protein complement(754067..754507) Rickettsia parkeri str. Portsmouth 11995471 YP_005393004.1 CDS MC1_04265 NC_017044.1 754572 755297 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(754572..755297) Rickettsia parkeri str. Portsmouth 11995472 YP_005393005.1 CDS MC1_04270 NC_017044.1 755375 756367 D COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 755375..756367 Rickettsia parkeri str. Portsmouth 11995473 YP_005393006.1 CDS MC1_04275 NC_017044.1 756519 756839 R hypothetical protein complement(756519..756839) Rickettsia parkeri str. Portsmouth 11995475 YP_005393007.1 CDS MC1_04280 NC_017044.1 757285 757485 R COG1373 Predicted ATPase (AAA+ superfamily); hypothetical protein complement(757285..757485) Rickettsia parkeri str. Portsmouth 11995476 YP_005393008.1 CDS MC1_04285 NC_017044.1 757682 757858 R hypothetical protein complement(757682..757858) Rickettsia parkeri str. Portsmouth 11995477 YP_005393009.1 CDS hemC NC_017044.1 758268 759323 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(758268..759323) Rickettsia parkeri str. Portsmouth 11995478 YP_005393010.1 CDS MC1_04295 NC_017044.1 759538 760173 R COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; Microcin C7 resistance protein complement(759538..760173) Rickettsia parkeri str. Portsmouth 11995479 YP_005393011.1 CDS MC1_04300 NC_017044.1 760160 761167 R COG0591 Na+/proline symporter; sodium/pantothenate symporter complement(760160..761167) Rickettsia parkeri str. Portsmouth 11995480 YP_005393012.1 CDS MC1_04305 NC_017044.1 761192 761392 D hypothetical protein 761192..761392 Rickettsia parkeri str. Portsmouth 11995481 YP_005393013.1 CDS MC1_04320 NC_017044.1 762301 762639 R hypothetical protein complement(762301..762639) Rickettsia parkeri str. Portsmouth 11995482 YP_005393014.1 CDS MC1_04325 NC_017044.1 762966 763973 R COG0354 Predicted aminomethyltransferase related to GcvT; Putative aminomethyltransferase related to GcvT complement(762966..763973) Rickettsia parkeri str. Portsmouth 11995483 YP_005393015.1 CDS MC1_04330 NC_017044.1 764086 764877 D COG1723 Uncharacterized conserved protein; hypothetical protein 764086..764877 Rickettsia parkeri str. Portsmouth 11995484 YP_005393016.1 CDS MC1_04335 NC_017044.1 764887 765732 D COG0349 Ribonuclease D; ribonuclease D 764887..765732 Rickettsia parkeri str. Portsmouth 11995485 YP_005393017.1 CDS MC1_04340 NC_017044.1 765784 766011 R hypothetical protein complement(765784..766011) Rickettsia parkeri str. Portsmouth 11995486 YP_005393018.1 CDS MC1_04345 NC_017044.1 766108 766629 R COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(766108..766629) Rickettsia parkeri str. Portsmouth 11995487 YP_005393019.1 CDS MC1_04350 NC_017044.1 766922 768301 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase complement(766922..768301) Rickettsia parkeri str. Portsmouth 11995488 YP_005393020.1 CDS MC1_04355 NC_017044.1 768454 769134 R COG0500 SAM-dependent methyltransferases; biotin synthesis protein BioC complement(768454..769134) Rickettsia parkeri str. Portsmouth 11995489 YP_005393021.1 CDS MC1_04360 NC_017044.1 769205 769660 R hypothetical protein complement(769205..769660) Rickettsia parkeri str. Portsmouth 11995490 YP_005393022.1 CDS MC1_04365 NC_017044.1 769752 770300 R COG0338 Site-specific DNA methylase; DNA adenine methyltransferase (MboA) complement(769752..770300) Rickettsia parkeri str. Portsmouth 11995491 YP_005393023.1 CDS MC1_04370 NC_017044.1 770590 770781 R hypothetical protein complement(770590..770781) Rickettsia parkeri str. Portsmouth 11995492 YP_005393024.1 CDS MC1_04375 NC_017044.1 770762 771448 R COG3676 Transposase and inactivated derivatives; transposase-like protein complement(770762..771448) Rickettsia parkeri str. Portsmouth 11995493 YP_005393025.1 CDS MC1_04380 NC_017044.1 771772 772257 R hypothetical protein complement(771772..772257) Rickettsia parkeri str. Portsmouth 11995494 YP_005393026.1 CDS MC1_04385 NC_017044.1 772262 773104 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase complement(772262..773104) Rickettsia parkeri str. Portsmouth 11995495 YP_005393027.1 CDS MC1_04390 NC_017044.1 773206 773658 R hypothetical protein complement(773206..773658) Rickettsia parkeri str. Portsmouth 11995496 YP_005393028.1 CDS MC1_04395 NC_017044.1 773660 773869 R hypothetical protein complement(773660..773869) Rickettsia parkeri str. Portsmouth 11995497 YP_005393029.1 CDS rpmJ NC_017044.1 774530 774655 D 50S ribosomal protein L36 774530..774655 Rickettsia parkeri str. Portsmouth 11995498 YP_005393030.1 CDS MC1_04405 NC_017044.1 774864 775625 D COG0217 Uncharacterized conserved protein; hypothetical protein 774864..775625 Rickettsia parkeri str. Portsmouth 11995499 YP_005393031.1 CDS MC1_04410 NC_017044.1 775622 776368 D COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); UDP-N-acetylglucosamine pyrophosphorylase 775622..776368 Rickettsia parkeri str. Portsmouth 11995500 YP_005393032.1 CDS MC1_04415 NC_017044.1 776939 777070 R hypothetical protein complement(776939..777070) Rickettsia parkeri str. Portsmouth 11995502 YP_005393033.1 CDS MC1_04420 NC_017044.1 777511 777705 D isopentenyl pyrophosphate isomerase 777511..777705 Rickettsia parkeri str. Portsmouth 11995503 YP_005393034.1 CDS MC1_04425 NC_017044.1 778290 778541 D hypothetical protein 778290..778541 Rickettsia parkeri str. Portsmouth 11995504 YP_005393035.1 CDS MC1_04430 NC_017044.1 778912 779229 R hypothetical protein complement(778912..779229) Rickettsia parkeri str. Portsmouth 11995505 YP_005393036.1 CDS MC1_04445 NC_017044.1 779657 779944 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(779657..779944) Rickettsia parkeri str. Portsmouth 11995506 YP_005393037.1 CDS MC1_04450 NC_017044.1 779952 780137 D hypothetical protein 779952..780137 Rickettsia parkeri str. Portsmouth 11995507 YP_005393038.1 CDS MC1_04455 NC_017044.1 780512 780673 D hypothetical protein 780512..780673 Rickettsia parkeri str. Portsmouth 11995508 YP_005393039.1 CDS MC1_04460 NC_017044.1 781143 781370 D hypothetical protein 781143..781370 Rickettsia parkeri str. Portsmouth 11995509 YP_005393040.1 CDS MC1_04465 NC_017044.1 781373 781945 R hypothetical protein complement(781373..781945) Rickettsia parkeri str. Portsmouth 11995510 YP_005393041.1 CDS MC1_04470 NC_017044.1 782682 782771 R putative ATP-binding protein complement(782682..782771) Rickettsia parkeri str. Portsmouth 11995511 YP_005393042.1 CDS MC1_04475 NC_017044.1 783856 785232 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 783856..785232 Rickettsia parkeri str. Portsmouth 11995512 YP_005393043.1 CDS MC1_04480 NC_017044.1 785219 786760 R hypothetical protein complement(785219..786760) Rickettsia parkeri str. Portsmouth 11995513 YP_005393044.1 CDS MC1_04485 NC_017044.1 786849 787841 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(786849..787841) Rickettsia parkeri str. Portsmouth 11995514 YP_005393045.1 CDS MC1_04500 NC_017044.1 789030 790976 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(789030..790976) Rickettsia parkeri str. Portsmouth 11995515 YP_005393046.1 CDS MC1_04505 NC_017044.1 791039 791614 D COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; aromatic acid decarboxylase 791039..791614 Rickettsia parkeri str. Portsmouth 11995516 YP_005393047.1 CDS MC1_04510 NC_017044.1 791604 791744 D hypothetical protein 791604..791744 Rickettsia parkeri str. Portsmouth 11995517 YP_005393048.1 CDS MC1_04515 NC_017044.1 791706 792011 R hypothetical protein complement(791706..792011) Rickettsia parkeri str. Portsmouth 11995518 YP_005393049.1 CDS MC1_04520 NC_017044.1 791981 793465 D COG0305 Replicative DNA helicase; replicative DNA helicase 791981..793465 Rickettsia parkeri str. Portsmouth 11995519 YP_005393050.1 CDS MC1_04525 NC_017044.1 793625 793834 R hypothetical protein complement(793625..793834) Rickettsia parkeri str. Portsmouth 11995520 YP_005393051.1 CDS MC1_04530 NC_017044.1 793989 794153 R COG0814 Amino acid permeases; hypothetical protein complement(793989..794153) Rickettsia parkeri str. Portsmouth 11995521 YP_005393052.1 CDS MC1_04535 NC_017044.1 794301 794456 R COG0814 Amino acid permeases; amino acid permease complement(794301..794456) Rickettsia parkeri str. Portsmouth 11995522 YP_005393053.1 CDS MC1_04540 NC_017044.1 794501 794728 R amino acid permease complement(794501..794728) Rickettsia parkeri str. Portsmouth 11995523 YP_005393054.1 CDS MC1_04545 NC_017044.1 794827 794931 R COG0814 Amino acid permeases; tyrosine-specific transport protein complement(794827..794931) Rickettsia parkeri str. Portsmouth 11995524 YP_005393055.1 CDS MC1_04550 NC_017044.1 795323 796015 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridine synthase 795323..796015 Rickettsia parkeri str. Portsmouth 11995525 YP_005393056.1 CDS MC1_04555 NC_017044.1 796062 798935 D COG1357 Uncharacterized low-complexity proteins; hypothetical protein 796062..798935 Rickettsia parkeri str. Portsmouth 11995526 YP_005393057.1 CDS MC1_04560 NC_017044.1 798940 799677 D COG0742 N6-adenine-specific methylase; N6-adenine-specific methylase 798940..799677 Rickettsia parkeri str. Portsmouth 11995527 YP_005393058.1 CDS MC1_04565 NC_017044.1 799823 801157 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 799823..801157 Rickettsia parkeri str. Portsmouth 11995528 YP_005393059.1 CDS MC1_04570 NC_017044.1 801154 801468 D COG0191 Fructose/tagatose bisphosphate aldolase; hypothetical protein 801154..801468 Rickettsia parkeri str. Portsmouth 11995529 YP_005393060.1 CDS recO NC_017044.1 801589 802302 D COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 801589..802302 Rickettsia parkeri str. Portsmouth 11995530 YP_005393061.1 CDS MC1_04580 NC_017044.1 802378 802614 D hypothetical protein 802378..802614 Rickettsia parkeri str. Portsmouth 11995531 YP_005393062.1 CDS MC1_04585 NC_017044.1 802750 803448 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; Putative glycoprotein endopeptidase 802750..803448 Rickettsia parkeri str. Portsmouth 11995532 YP_005393063.1 CDS MC1_04590 NC_017044.1 803500 804762 R hypothetical protein complement(803500..804762) Rickettsia parkeri str. Portsmouth 11995533 YP_005393064.1 CDS infB NC_017044.1 805135 807630 R COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 complement(805135..807630) Rickettsia parkeri str. Portsmouth 11995534 YP_005393065.1 CDS nusA NC_017044.1 807865 809376 R COG0195 Transcription elongation factor; transcription elongation factor NusA complement(807865..809376) Rickettsia parkeri str. Portsmouth 11995535 YP_005393066.1 CDS MC1_04605 NC_017044.1 809387 809872 R COG0779 Uncharacterized protein conserved in bacteria; ribosome maturation protein RimP complement(809387..809872) Rickettsia parkeri str. Portsmouth 11995536 YP_005393067.1 CDS MC1_04610 NC_017044.1 810088 810402 R hypothetical protein complement(810088..810402) Rickettsia parkeri str. Portsmouth 11995537 YP_005393068.1 CDS MC1_04615 NC_017044.1 810993 811331 R hypothetical protein complement(810993..811331) Rickettsia parkeri str. Portsmouth 11995538 YP_005393069.1 CDS MC1_04620 NC_017044.1 811410 811838 D COG1959 Predicted transcriptional regulator; Putative transcriptional regulator 811410..811838 Rickettsia parkeri str. Portsmouth 11995539 YP_005393070.1 CDS MC1_04625 NC_017044.1 811833 812588 R COG1189 Predicted rRNA methylase; Hemolysin A complement(811833..812588) Rickettsia parkeri str. Portsmouth 11995540 YP_005393071.1 CDS MC1_04630 NC_017044.1 812747 813982 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(812747..813982) Rickettsia parkeri str. Portsmouth 11995541 YP_005393072.1 CDS MC1_04635 NC_017044.1 813986 814102 R hypothetical protein complement(813986..814102) Rickettsia parkeri str. Portsmouth 11995542 YP_005393073.1 CDS MC1_04640 NC_017044.1 814280 814525 R COG5304 Uncharacterized protein conserved in bacteria; hypothetical protein complement(814280..814525) Rickettsia parkeri str. Portsmouth 11995543 YP_005393074.1 CDS MC1_04645 NC_017044.1 814593 814886 D COG1012 NAD-dependent aldehyde dehydrogenases; hypothetical protein 814593..814886 Rickettsia parkeri str. Portsmouth 11995544 YP_005393075.1 CDS MC1_04650 NC_017044.1 815834 815965 R hypothetical protein complement(815834..815965) Rickettsia parkeri str. Portsmouth 11995545 YP_005393076.1 CDS MC1_04655 NC_017044.1 816355 816480 D COG3547 Transposase and inactivated derivatives; hypothetical protein 816355..816480 Rickettsia parkeri str. Portsmouth 11995547 YP_005393077.1 CDS MC1_04660 NC_017044.1 816788 817165 R hypothetical protein complement(816788..817165) Rickettsia parkeri str. Portsmouth 11995548 YP_005393078.1 CDS MC1_04665 NC_017044.1 817550 817927 R hypothetical protein complement(817550..817927) Rickettsia parkeri str. Portsmouth 11995549 YP_005393079.1 CDS MC1_04670 NC_017044.1 818232 818393 R hypothetical protein complement(818232..818393) Rickettsia parkeri str. Portsmouth 11995550 YP_005393080.1 CDS MC1_04675 NC_017044.1 818408 819388 R hypothetical protein complement(818408..819388) Rickettsia parkeri str. Portsmouth 11995551 YP_005393081.1 CDS MC1_04680 NC_017044.1 819481 819708 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter complement(819481..819708) Rickettsia parkeri str. Portsmouth 11995552 YP_005393082.1 CDS MC1_04730 NC_017044.1 827726 827884 R 3-hydroxyacyl-CoA dehydrogenase (FadB) complement(827726..827884) Rickettsia parkeri str. Portsmouth 11995553 YP_005393083.1 CDS MC1_04735 NC_017044.1 827889 828257 R COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase (FadB) complement(827889..828257) Rickettsia parkeri str. Portsmouth 11995554 YP_005393084.1 CDS MC1_04740 NC_017044.1 828259 828723 R COG1250 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase (FadB) complement(828259..828723) Rickettsia parkeri str. Portsmouth 11995555 YP_005393085.1 CDS MC1_04745 NC_017044.1 828810 829175 R Competence protein F complement(828810..829175) Rickettsia parkeri str. Portsmouth 11995556 YP_005393086.1 CDS MC1_04750 NC_017044.1 829560 830027 R hypothetical protein complement(829560..830027) Rickettsia parkeri str. Portsmouth 11995557 YP_005393087.1 CDS MC1_04755 NC_017044.1 830051 830392 R hypothetical protein complement(830051..830392) Rickettsia parkeri str. Portsmouth 11995558 YP_005393088.1 CDS MC1_04760 NC_017044.1 830413 830655 R hypothetical protein complement(830413..830655) Rickettsia parkeri str. Portsmouth 11995559 YP_005393089.1 CDS MC1_04765 NC_017044.1 830654 830728 D hypothetical protein 830654..830728 Rickettsia parkeri str. Portsmouth 11995560 YP_005393090.1 CDS MC1_04770 NC_017044.1 830845 831111 R hypothetical protein complement(830845..831111) Rickettsia parkeri str. Portsmouth 11995561 YP_005393091.1 CDS MC1_04775 NC_017044.1 831289 832575 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(831289..832575) Rickettsia parkeri str. Portsmouth 11995562 YP_005393092.1 CDS MC1_04780 NC_017044.1 832556 832822 R COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit; putative monovalent cation/H+ antiporter subunit F complement(832556..832822) Rickettsia parkeri str. Portsmouth 11995563 YP_005393093.1 CDS MC1_04785 NC_017044.1 833362 834786 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Nitrogen assimilation regulatory protein NtrX 833362..834786 Rickettsia parkeri str. Portsmouth 11995564 YP_005393094.1 CDS MC1_04790 NC_017044.1 834779 836524 D COG1357 Uncharacterized low-complexity proteins; hypothetical protein 834779..836524 Rickettsia parkeri str. Portsmouth 11995565 YP_005393095.1 CDS MC1_04795 NC_017044.1 836746 837705 R hypothetical protein complement(836746..837705) Rickettsia parkeri str. Portsmouth 11995566 YP_005393096.1 CDS MC1_04800 NC_017044.1 838380 840161 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein complement(838380..840161) Rickettsia parkeri str. Portsmouth 11995567 YP_005393097.1 CDS MC1_04805 NC_017044.1 840151 840672 R hypothetical protein complement(840151..840672) Rickettsia parkeri str. Portsmouth 11995568 YP_005393098.1 CDS MC1_04810 NC_017044.1 840922 841116 R hypothetical protein complement(840922..841116) Rickettsia parkeri str. Portsmouth 11995569 YP_005393099.1 CDS MC1_04815 NC_017044.1 841291 842973 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein complement(841291..842973) Rickettsia parkeri str. Portsmouth 11995570 YP_005393100.1 CDS MC1_04820 NC_017044.1 843315 843713 R cell division protein FtsL complement(843315..843713) Rickettsia parkeri str. Portsmouth 11995571 YP_005393101.1 CDS MC1_04825 NC_017044.1 843720 844643 R COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase complement(843720..844643) Rickettsia parkeri str. Portsmouth 11995572 YP_005393102.1 CDS MC1_04830 NC_017044.1 844643 845092 R COG2001 Uncharacterized protein conserved in bacteria; cell division protein MraZ complement(844643..845092) Rickettsia parkeri str. Portsmouth 11995573 YP_005393103.1 CDS MC1_04835 NC_017044.1 845500 846018 D COG0666 FOG: Ankyrin repeat; ankyrin repeat-containing protein 845500..846018 Rickettsia parkeri str. Portsmouth 11994432 YP_005393104.1 CDS MC1_04840 NC_017044.1 846669 848066 D COG0591 Na+/proline symporter; major facilitator superfamily permease 846669..848066 Rickettsia parkeri str. Portsmouth 11994433 YP_005393105.1 CDS MC1_04845 NC_017044.1 848344 848505 D hypothetical protein 848344..848505 Rickettsia parkeri str. Portsmouth 11994434 YP_005393106.1 CDS uvrC NC_017044.1 848693 850612 R COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C complement(848693..850612) Rickettsia parkeri str. Portsmouth 11994435 YP_005393107.1 CDS MC1_04855 NC_017044.1 850787 851320 R COG2847 Uncharacterized protein conserved in bacteria; copper(I)-binding protein complement(850787..851320) Rickettsia parkeri str. Portsmouth 11994436 YP_005393108.1 CDS MC1_04860 NC_017044.1 851382 851894 R COG4912 Predicted DNA alkylation repair enzyme; hypothetical protein complement(851382..851894) Rickettsia parkeri str. Portsmouth 11994437 YP_005393109.1 CDS MC1_04865 NC_017044.1 851902 852111 R putative DNA alkylation repair protein complement(851902..852111) Rickettsia parkeri str. Portsmouth 11994438 YP_005393110.1 CDS MC1_04870 NC_017044.1 852383 852922 R COG2169 Adenosine deaminase. Potential operon component.; methylated-DNA--protein-cysteine methyltransferase complement(852383..852922) Rickettsia parkeri str. Portsmouth 11994439 YP_005393111.1 CDS MC1_04875 NC_017044.1 852870 853103 R COG2169 Adenosine deaminase. Potential operon component.; methylated-DNA--protein-cysteine methyltransferase complement(852870..853103) Rickettsia parkeri str. Portsmouth 11994440 YP_005393112.1 CDS MC1_04880 NC_017044.1 853193 853699 R COG0350 Methylated DNA-protein cysteine methyltransferase; Methylated-DNA--protein-cysteine methyltransferase complement(853193..853699) Rickettsia parkeri str. Portsmouth 11994441 YP_005393113.1 CDS MC1_04885 NC_017044.1 853797 853943 D hypothetical protein 853797..853943 Rickettsia parkeri str. Portsmouth 11994442 YP_005393114.1 CDS MC1_04890 NC_017044.1 853991 854182 D hypothetical protein 853991..854182 Rickettsia parkeri str. Portsmouth 11994443 YP_005393115.1 CDS MC1_04895 NC_017044.1 854318 854401 D hypothetical protein 854318..854401 Rickettsia parkeri str. Portsmouth 11994444 YP_005393116.1 CDS MC1_04900 NC_017044.1 854473 854604 R hypothetical protein complement(854473..854604) Rickettsia parkeri str. Portsmouth 11994445 YP_005393117.1 CDS MC1_04915 NC_017044.1 855513 855980 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme restriction subunit complement(855513..855980) Rickettsia parkeri str. Portsmouth 11994446 YP_005393118.1 CDS MC1_04920 NC_017044.1 856053 856526 R hypothetical protein complement(856053..856526) Rickettsia parkeri str. Portsmouth 11994447 YP_005393119.1 CDS MC1_04925 NC_017044.1 857030 857239 R hypothetical protein complement(857030..857239) Rickettsia parkeri str. Portsmouth 11994449 YP_005393120.1 CDS MC1_04930 NC_017044.1 857565 857807 R ankyrin repeat-containing protein complement(857565..857807) Rickettsia parkeri str. Portsmouth 11994450 YP_005393121.1 CDS MC1_04935 NC_017044.1 858027 858257 R ankyrin repeat-containing protein complement(858027..858257) Rickettsia parkeri str. Portsmouth 11994451 YP_005393122.1 CDS MC1_04940 NC_017044.1 858872 861589 R COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA complement(858872..861589) Rickettsia parkeri str. Portsmouth 11994452 YP_005393123.1 CDS MC1_04945 NC_017044.1 861805 862653 D COG0760 Parvulin-like peptidyl-prolyl isomerase; Parvulin-like peptidyl-prolyl isomerase 861805..862653 Rickettsia parkeri str. Portsmouth 11994453 YP_005393124.1 CDS acpS NC_017044.1 862864 863259 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(862864..863259) Rickettsia parkeri str. Portsmouth 11994454 YP_005393125.1 CDS rpoZ NC_017044.1 863260 863643 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(863260..863643) Rickettsia parkeri str. Portsmouth 11994455 YP_005393126.1 CDS MC1_04960 NC_017044.1 863822 865081 R COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(863822..865081) Rickettsia parkeri str. Portsmouth 11994456 YP_005393127.1 CDS gyrB NC_017044.1 865173 867596 R COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B complement(865173..867596) Rickettsia parkeri str. Portsmouth 11994457 YP_005393128.1 CDS MC1_04970 NC_017044.1 867876 868736 D COG0647 Predicted sugar phosphatases of the HAD superfamily; HAD-superfamily hydrolase 867876..868736 Rickettsia parkeri str. Portsmouth 11994458 YP_005393129.1 CDS MC1_04975 NC_017044.1 869242 870612 D COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); magnesium transporter 869242..870612 Rickettsia parkeri str. Portsmouth 11994460 YP_005393130.1 CDS MC1_04980 NC_017044.1 870616 870903 R hypothetical protein complement(870616..870903) Rickettsia parkeri str. Portsmouth 11994461 YP_005393131.1 CDS MC1_04985 NC_017044.1 871463 871897 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; Guanosine polyphosphate pyrophosphohydrolase/synthetase 871463..871897 Rickettsia parkeri str. Portsmouth 11994462 YP_005393132.1 CDS MC1_04990 NC_017044.1 871937 872278 R Proline/betaine transporter complement(871937..872278) Rickettsia parkeri str. Portsmouth 11994463 YP_005393133.1 CDS MC1_04995 NC_017044.1 872693 873136 R COG0477 Permeases of the major facilitator superfamily; Proline/betaine transporter complement(872693..873136) Rickettsia parkeri str. Portsmouth 11994464 YP_005393134.1 CDS MC1_05000 NC_017044.1 873860 874030 R Putative antitoxin of toxin-antitoxin (TA) system complement(873860..874030) Rickettsia parkeri str. Portsmouth 11994466 YP_005393135.1 CDS MC1_05005 NC_017044.1 874250 874489 D hypothetical protein 874250..874489 Rickettsia parkeri str. Portsmouth 11994467 YP_005393136.1 CDS yajC NC_017044.1 874441 874866 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 874441..874866 Rickettsia parkeri str. Portsmouth 11994468 YP_005393137.1 CDS secD NC_017044.1 874850 876406 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 874850..876406 Rickettsia parkeri str. Portsmouth 11994469 YP_005393138.1 CDS MC1_05020 NC_017044.1 876651 877268 D COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; Sco2 protein 876651..877268 Rickettsia parkeri str. Portsmouth 11994470 YP_005393139.1 CDS MC1_05025 NC_017044.1 877370 877756 D COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome c-type biogenesis protein CcmE 877370..877756 Rickettsia parkeri str. Portsmouth 11994471 YP_005393140.1 CDS MC1_05030 NC_017044.1 877882 878403 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 877882..878403 Rickettsia parkeri str. Portsmouth 11994472 YP_005393141.1 CDS MC1_05035 NC_017044.1 878614 880281 D COG0728 Uncharacterized membrane protein, putative virulence factor; Integral membrane protein MviN 878614..880281 Rickettsia parkeri str. Portsmouth 11994473 YP_005393142.1 CDS MC1_05040 NC_017044.1 880262 881014 D F pilin acetylation protein TraX 880262..881014 Rickettsia parkeri str. Portsmouth 11994474 YP_005393143.1 CDS MC1_05045 NC_017044.1 881088 881690 D hypothetical protein 881088..881690 Rickettsia parkeri str. Portsmouth 11994475 YP_005393144.1 CDS MC1_05050 NC_017044.1 881898 884039 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(881898..884039) Rickettsia parkeri str. Portsmouth 11994476 YP_005393145.1 CDS MC1_05065 NC_017044.1 885454 886095 D COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; Succinyl-CoA:3-ketoacid-coenzyme A transferase 885454..886095 Rickettsia parkeri str. Portsmouth 11994477 YP_005393146.1 CDS MC1_05070 NC_017044.1 886099 886734 D COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 886099..886734 Rickettsia parkeri str. Portsmouth 11994478 YP_005393147.1 CDS MC1_05075 NC_017044.1 886939 887112 D COG0655 Multimeric flavodoxin WrbA. Potential operon component.; tryptophan repressor binding protein 886939..887112 Rickettsia parkeri str. Portsmouth 11994479 YP_005393148.1 CDS MC1_05080 NC_017044.1 887109 887324 D COG0655 Multimeric flavodoxin WrbA. Potential operon component.; tryptophan repressor binding protein 887109..887324 Rickettsia parkeri str. Portsmouth 11994480 YP_005393149.1 CDS MC1_05085 NC_017044.1 887373 888953 R Actin polymerization protein RickA complement(887373..888953) Rickettsia parkeri str. Portsmouth 11994481 YP_005393150.1 CDS mraY NC_017044.1 889072 890157 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(889072..890157) Rickettsia parkeri str. Portsmouth 11994482 YP_005393151.1 CDS MC1_05095 NC_017044.1 890352 891701 R COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamyl- 2,6-diaminopimelate--D-alanyl-D-alanyl ligase complement(890352..891701) Rickettsia parkeri str. Portsmouth 11994483 YP_005393152.1 CDS murE NC_017044.1 891910 893349 R COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(891910..893349) Rickettsia parkeri str. Portsmouth 11994484 YP_005393153.1 CDS MC1_05105 NC_017044.1 893496 896864 R COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor complement(893496..896864) Rickettsia parkeri str. Portsmouth 11994485 YP_005393154.1 CDS MC1_05110 NC_017044.1 896876 897139 R COG2938 Uncharacterized conserved protein; Tetratricopeptide repeat-containing protein complement(896876..897139) Rickettsia parkeri str. Portsmouth 11994486 YP_005393155.1 CDS MC1_05115 NC_017044.1 897301 897672 D COG0607 Rhodanese-related sulfurtransferase; Rhodanese-related sulfurtransferase 897301..897672 Rickettsia parkeri str. Portsmouth 11994487 YP_005393156.1 CDS dnaA NC_017044.1 897673 899064 D COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 897673..899064 Rickettsia parkeri str. Portsmouth 11994488 YP_005393157.1 CDS MC1_05125 NC_017044.1 899847 900089 R hypothetical protein complement(899847..900089) Rickettsia parkeri str. Portsmouth 11994489 YP_005393158.1 CDS MC1_05140 NC_017044.1 901323 901649 R hypothetical protein complement(901323..901649) Rickettsia parkeri str. Portsmouth 11994490 YP_005393159.1 CDS MC1_05145 NC_017044.1 901678 901998 R hypothetical protein complement(901678..901998) Rickettsia parkeri str. Portsmouth 11994491 YP_005393160.1 CDS MC1_05150 NC_017044.1 902192 903664 D COG3621 Patatin; patatin b1 902192..903664 Rickettsia parkeri str. Portsmouth 11994492 YP_005393161.1 CDS MC1_05155 NC_017044.1 903854 903988 R bicyclomycin resistance protein (Bcr1) complement(903854..903988) Rickettsia parkeri str. Portsmouth 11994493 YP_005393162.1 CDS MC1_05160 NC_017044.1 903978 904247 R bicyclomycin resistance protein complement(903978..904247) Rickettsia parkeri str. Portsmouth 11994494 YP_005393163.1 CDS MC1_05165 NC_017044.1 904280 904585 R COG0477 Permeases of the major facilitator superfamily; bicyclomycin resistance protein (Bcr1) complement(904280..904585) Rickettsia parkeri str. Portsmouth 11994495 YP_005393164.1 CDS MC1_05180 NC_017044.1 905738 905941 R COG1708 Predicted nucleotidyltransferases; hypothetical protein complement(905738..905941) Rickettsia parkeri str. Portsmouth 11994496 YP_005393165.1 CDS MC1_05185 NC_017044.1 905988 907085 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(905988..907085) Rickettsia parkeri str. Portsmouth 11994497 YP_005393166.1 CDS MC1_05190 NC_017044.1 907082 907240 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Acetyltransferase complement(907082..907240) Rickettsia parkeri str. Portsmouth 11994498 YP_005393167.1 CDS MC1_05195 NC_017044.1 907267 907497 R Acetyltransferase complement(907267..907497) Rickettsia parkeri str. Portsmouth 11994499 YP_005393168.1 CDS MC1_05200 NC_017044.1 907702 908259 R COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(907702..908259) Rickettsia parkeri str. Portsmouth 11994500 YP_005393169.1 CDS MC1_05205 NC_017044.1 908581 909192 R COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc complement(908581..909192) Rickettsia parkeri str. Portsmouth 11994501 YP_005393170.1 CDS MC1_05210 NC_017044.1 909939 910616 R COG0602 Organic radical activating enzymes; Organic radical activating enzyme complement(909939..910616) Rickettsia parkeri str. Portsmouth 11994502 YP_005393171.1 CDS rpmI NC_017044.1 910783 910989 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 910783..910989 Rickettsia parkeri str. Portsmouth 11994503 YP_005393172.1 CDS rplT NC_017044.1 911009 911362 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 911009..911362 Rickettsia parkeri str. Portsmouth 11994504 YP_005393173.1 CDS rpmH NC_017044.1 911445 911579 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 911445..911579 Rickettsia parkeri str. Portsmouth 11994505 YP_005393174.1 CDS rnpA NC_017044.1 911599 911955 D ribonuclease P 911599..911955 Rickettsia parkeri str. Portsmouth 11994506 YP_005393175.1 CDS MC1_05235 NC_017044.1 912367 913887 R COG0666 FOG: Ankyrin repeat; hypothetical protein complement(912367..913887) Rickettsia parkeri str. Portsmouth 11994507 YP_005393176.1 CDS MC1_05240 NC_017044.1 914252 914509 R hypothetical protein complement(914252..914509) Rickettsia parkeri str. Portsmouth 11994508 YP_005393177.1 CDS MC1_05245 NC_017044.1 915014 915253 R hypothetical protein complement(915014..915253) Rickettsia parkeri str. Portsmouth 11994509 YP_005393178.1 CDS MC1_05250 NC_017044.1 915259 915348 R hypothetical protein complement(915259..915348) Rickettsia parkeri str. Portsmouth 11994510 YP_005393179.1 CDS MC1_05255 NC_017044.1 915441 915758 R hypothetical protein complement(915441..915758) Rickettsia parkeri str. Portsmouth 11994511 YP_005393180.1 CDS MC1_05260 NC_017044.1 915976 916935 R COG0598 Mg2+ and Co2+ transporters; magnesium/nickel/cobalt transporter CorA complement(915976..916935) Rickettsia parkeri str. Portsmouth 11994512 YP_005393181.1 CDS MC1_05265 NC_017044.1 917172 917324 R hypothetical protein complement(917172..917324) Rickettsia parkeri str. Portsmouth 11994513 YP_005393182.1 CDS MC1_05270 NC_017044.1 917623 917841 R hypothetical protein complement(917623..917841) Rickettsia parkeri str. Portsmouth 11994514 YP_005393183.1 CDS MC1_05275 NC_017044.1 920717 921295 R COG3173 Predicted aminoglycoside phosphotransferase; aminoglycoside 3-N-acetyltransferase complement(920717..921295) Rickettsia parkeri str. Portsmouth 11994516 YP_005393184.1 CDS MC1_05280 NC_017044.1 921447 921593 R COG3173 Predicted aminoglycoside phosphotransferase; acetyltransferase complement(921447..921593) Rickettsia parkeri str. Portsmouth 11994517 YP_005393185.1 CDS MC1_05285 NC_017044.1 921686 923473 R COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; Nitrogen regulation protein NtrY complement(921686..923473) Rickettsia parkeri str. Portsmouth 11994518 YP_005393186.1 CDS rpsU NC_017044.1 923851 924051 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(923851..924051) Rickettsia parkeri str. Portsmouth 11994519 YP_005393187.1 CDS MC1_05295 NC_017044.1 924130 924741 D COG5590 Uncharacterized conserved protein; hypothetical protein 924130..924741 Rickettsia parkeri str. Portsmouth 11994520 YP_005393188.1 CDS MC1_05300 NC_017044.1 924784 924960 D hypothetical protein 924784..924960 Rickettsia parkeri str. Portsmouth 11994521 YP_005393189.1 CDS MC1_05305 NC_017044.1 925369 925557 D hypothetical protein 925369..925557 Rickettsia parkeri str. Portsmouth 11994522 YP_005393190.1 CDS ileS NC_017044.1 925731 929009 D COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 925731..929009 Rickettsia parkeri str. Portsmouth 11994523 YP_005393191.1 CDS MC1_05315 NC_017044.1 929097 929321 D hypothetical protein 929097..929321 Rickettsia parkeri str. Portsmouth 11994524 YP_005393192.1 CDS MC1_05320 NC_017044.1 929473 929754 D hypothetical protein 929473..929754 Rickettsia parkeri str. Portsmouth 11994525 YP_005393193.1 CDS MC1_05325 NC_017044.1 929881 930138 D COG0666 FOG: Ankyrin repeat; hypothetical protein 929881..930138 Rickettsia parkeri str. Portsmouth 11994526 YP_005393194.1 CDS MC1_05330 NC_017044.1 930821 931048 D COG0457 FOG: TPR repeat; hypothetical protein 930821..931048 Rickettsia parkeri str. Portsmouth 11994527 YP_005393195.1 CDS MC1_05335 NC_017044.1 931214 931366 R hypothetical protein complement(931214..931366) Rickettsia parkeri str. Portsmouth 11994528 YP_005393196.1 CDS MC1_05340 NC_017044.1 931359 933356 R COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; acetyl-CoA carboxylase, biotin carboxylase complement(931359..933356) Rickettsia parkeri str. Portsmouth 11994529 YP_005393197.1 CDS MC1_05345 NC_017044.1 933454 934998 R COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); propionyl-CoA carboxylase subunit beta complement(933454..934998) Rickettsia parkeri str. Portsmouth 11994530 YP_005393198.1 CDS MC1_05350 NC_017044.1 935074 935322 D hypothetical protein 935074..935322 Rickettsia parkeri str. Portsmouth 11994531 YP_005393199.1 CDS MC1_05355 NC_017044.1 935557 938979 D COG0477 Permeases of the major facilitator superfamily; acylglycerophosphoethanolamine acyltransferase 935557..938979 Rickettsia parkeri str. Portsmouth 11994532 YP_005393200.1 CDS MC1_05360 NC_017044.1 939117 939452 R COG3070 Regulator of competence-specific genes; hypothetical protein complement(939117..939452) Rickettsia parkeri str. Portsmouth 11994533 YP_005393201.1 CDS MC1_05365 NC_017044.1 939449 940210 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Zinc/manganese ABC transporter permease complement(939449..940210) Rickettsia parkeri str. Portsmouth 11994534 YP_005393202.1 CDS MC1_05370 NC_017044.1 940348 941217 D COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 940348..941217 Rickettsia parkeri str. Portsmouth 11994535 YP_005393203.1 CDS gltX NC_017044.1 941516 943057 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 941516..943057 Rickettsia parkeri str. Portsmouth 11994536 YP_005393204.1 CDS MC1_05380 NC_017044.1 943054 943590 D COG5342 Invasion protein B, involved in pathogenesis. Potential operon component.; hypothetical protein 943054..943590 Rickettsia parkeri str. Portsmouth 11994537 YP_005393205.1 CDS groES NC_017044.1 946119 946406 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(946119..946406) Rickettsia parkeri str. Portsmouth 11994538 YP_005393206.1 CDS MC1_05400 NC_017044.1 946627 946911 R hypothetical protein complement(946627..946911) Rickettsia parkeri str. Portsmouth 11994539 YP_005393207.1 CDS MC1_05405 NC_017044.1 947193 947297 R hypothetical protein complement(947193..947297) Rickettsia parkeri str. Portsmouth 11994540 YP_005393208.1 CDS MC1_05420 NC_017044.1 948459 948941 R hypothetical protein complement(948459..948941) Rickettsia parkeri str. Portsmouth 11994541 YP_005393209.1 CDS MC1_05425 NC_017044.1 949215 949484 D hypothetical protein 949215..949484 Rickettsia parkeri str. Portsmouth 11994542 YP_005393210.1 CDS rph NC_017044.1 949639 950358 R COG0689 RNase PH; ribonuclease PH complement(949639..950358) Rickettsia parkeri str. Portsmouth 11994543 YP_005393211.1 CDS MC1_05435 NC_017044.1 950597 951133 D COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE 950597..951133 Rickettsia parkeri str. Portsmouth 11994544 YP_005393212.1 CDS MC1_05440 NC_017044.1 951277 952332 D COG0628 Predicted permease; putative permease PerM-like protein 951277..952332 Rickettsia parkeri str. Portsmouth 11994545 YP_005393213.1 CDS MC1_05445 NC_017044.1 952348 953016 D COG0593 ATPase involved in DNA replication initiation; hypothetical protein 952348..953016 Rickettsia parkeri str. Portsmouth 11994546 YP_005393214.1 CDS MC1_05450 NC_017044.1 953199 953339 D COG0477 Permeases of the major facilitator superfamily; MFS type sugar transporter 953199..953339 Rickettsia parkeri str. Portsmouth 11994547 YP_005393215.1 CDS MC1_05455 NC_017044.1 953332 953586 D COG0477 Permeases of the major facilitator superfamily; MFS-type sugar transporter 953332..953586 Rickettsia parkeri str. Portsmouth 11994548 YP_005393216.1 CDS MC1_05460 NC_017044.1 953728 953919 D MFS type sugar transporter 953728..953919 Rickettsia parkeri str. Portsmouth 11994549 YP_005393217.1 CDS MC1_05465 NC_017044.1 954085 954273 D MFS type sugar transporter 954085..954273 Rickettsia parkeri str. Portsmouth 11994550 YP_005393218.1 CDS MC1_05470 NC_017044.1 954318 954551 R hypothetical protein complement(954318..954551) Rickettsia parkeri str. Portsmouth 11994551 YP_005393219.1 CDS MC1_05475 NC_017044.1 954650 954919 D hypothetical protein 954650..954919 Rickettsia parkeri str. Portsmouth 11994552 YP_005393220.1 CDS MC1_05480 NC_017044.1 954981 955181 R hypothetical protein complement(954981..955181) Rickettsia parkeri str. Portsmouth 11994553 YP_005393221.1 CDS MC1_05485 NC_017044.1 955413 955772 D hypothetical protein 955413..955772 Rickettsia parkeri str. Portsmouth 11994554 YP_005393222.1 CDS rpsT NC_017044.1 956154 956432 R COG0268 Ribosomal protein S20; 30S ribosomal protein S20 complement(956154..956432) Rickettsia parkeri str. Portsmouth 11994556 YP_005393223.1 CDS rplQ NC_017044.1 956451 956861 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(956451..956861) Rickettsia parkeri str. Portsmouth 11994557 YP_005393224.1 CDS MC1_05500 NC_017044.1 956872 957894 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(956872..957894) Rickettsia parkeri str. Portsmouth 11994558 YP_005393225.1 CDS MC1_05505 NC_017044.1 957913 958296 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(957913..958296) Rickettsia parkeri str. Portsmouth 11994559 YP_005393226.1 CDS rpsM NC_017044.1 958321 958698 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(958321..958698) Rickettsia parkeri str. Portsmouth 11994560 YP_005393227.1 CDS adk NC_017044.1 958757 959395 R COG0563 Adenylate kinase and related kinases; adenylate kinase complement(958757..959395) Rickettsia parkeri str. Portsmouth 11994561 YP_005393228.1 CDS secY NC_017044.1 959411 960712 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(959411..960712) Rickettsia parkeri str. Portsmouth 11994562 YP_005393229.1 CDS rplO NC_017044.1 960716 961177 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(960716..961177) Rickettsia parkeri str. Portsmouth 11994563 YP_005393230.1 CDS rpmD NC_017044.1 961191 961382 R COG1841 Ribosomal protein L30/L7E; 50S ribosomal protein L30 complement(961191..961382) Rickettsia parkeri str. Portsmouth 11994564 YP_005393231.1 CDS rpsE NC_017044.1 961406 961936 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(961406..961936) Rickettsia parkeri str. Portsmouth 11994565 YP_005393232.1 CDS rplR NC_017044.1 961954 962310 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(961954..962310) Rickettsia parkeri str. Portsmouth 11994566 YP_005393233.1 CDS rplF NC_017044.1 962326 962859 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(962326..962859) Rickettsia parkeri str. Portsmouth 11994567 YP_005393234.1 CDS rpsH NC_017044.1 962868 963266 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(962868..963266) Rickettsia parkeri str. Portsmouth 11994568 YP_005393235.1 CDS rpsN NC_017044.1 963286 963591 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(963286..963591) Rickettsia parkeri str. Portsmouth 11994569 YP_005393236.1 CDS rplE NC_017044.1 963609 964148 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(963609..964148) Rickettsia parkeri str. Portsmouth 11994570 YP_005393237.1 CDS rplX NC_017044.1 964148 964477 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(964148..964477) Rickettsia parkeri str. Portsmouth 11994571 YP_005393238.1 CDS rplN NC_017044.1 964478 964846 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(964478..964846) Rickettsia parkeri str. Portsmouth 11994572 YP_005393239.1 CDS rpsQ NC_017044.1 964921 965154 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(964921..965154) Rickettsia parkeri str. Portsmouth 11994573 YP_005393240.1 CDS MC1_05580 NC_017044.1 965156 965371 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(965156..965371) Rickettsia parkeri str. Portsmouth 11994574 YP_005393241.1 CDS rplP NC_017044.1 965364 965774 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(965364..965774) Rickettsia parkeri str. Portsmouth 11994575 YP_005393242.1 CDS rpsC NC_017044.1 965789 966442 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(965789..966442) Rickettsia parkeri str. Portsmouth 11994576 YP_005393243.1 CDS rplV NC_017044.1 966444 966803 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(966444..966803) Rickettsia parkeri str. Portsmouth 11994577 YP_005393244.1 CDS rpsS NC_017044.1 966812 967090 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(966812..967090) Rickettsia parkeri str. Portsmouth 11994578 YP_005393245.1 CDS rplB NC_017044.1 967115 967936 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(967115..967936) Rickettsia parkeri str. Portsmouth 11994579 YP_005393246.1 CDS rplW NC_017044.1 967937 968233 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(967937..968233) Rickettsia parkeri str. Portsmouth 11994580 YP_005393247.1 CDS rplD NC_017044.1 968230 968853 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(968230..968853) Rickettsia parkeri str. Portsmouth 11994581 YP_005393248.1 CDS rplC NC_017044.1 968964 969611 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(968964..969611) Rickettsia parkeri str. Portsmouth 11994582 YP_005393249.1 CDS rpsJ NC_017044.1 969612 969929 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(969612..969929) Rickettsia parkeri str. Portsmouth 11994583 YP_005393250.1 CDS MC1_05630 NC_017044.1 969926 970060 R hypothetical protein complement(969926..970060) Rickettsia parkeri str. Portsmouth 11994584 YP_005393251.1 CDS MC1_05635 NC_017044.1 970170 971354 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(970170..971354) Rickettsia parkeri str. Portsmouth 11994585 YP_005393252.1 CDS MC1_05640 NC_017044.1 971930 972652 D COG0566 rRNA methylases; tRNA/rRNA methyltransferase 971930..972652 Rickettsia parkeri str. Portsmouth 11994588 YP_005393253.1 CDS MC1_05645 NC_017044.1 972763 973215 D hypothetical protein 972763..973215 Rickettsia parkeri str. Portsmouth 11994589 YP_005393254.1 CDS fumC NC_017044.1 973212 974603 D COG0114 Fumarase; fumarate hydratase 973212..974603 Rickettsia parkeri str. Portsmouth 11994590 YP_005393255.1 CDS MC1_05655 NC_017044.1 974700 974948 D COG4118 Antitoxin of toxin-antitoxin stability system; antitoxin of toxin-antitoxin system phd 974700..974948 Rickettsia parkeri str. Portsmouth 11994591 YP_005393256.1 CDS MC1_05660 NC_017044.1 974942 975265 D hypothetical protein 974942..975265 Rickettsia parkeri str. Portsmouth 11994592 YP_005393257.1 CDS MC1_05665 NC_017044.1 975447 976805 D COG0206 Cell division GTPase; cell division protein FtsZ 975447..976805 Rickettsia parkeri str. Portsmouth 11994593 YP_005393258.1 CDS MC1_05680 NC_017044.1 977911 978117 D COG4574 Serine protease inhibitor ecotin; Ecotin 977911..978117 Rickettsia parkeri str. Portsmouth 11994594 YP_005393259.1 CDS MC1_05685 NC_017044.1 978335 978907 R COG0694 Thioredoxin-like proteins and domains; NifU-like protein complement(978335..978907) Rickettsia parkeri str. Portsmouth 11994596 YP_005393260.1 CDS MC1_05690 NC_017044.1 979255 980319 R COG0477 Permeases of the major facilitator superfamily; AmpG protein complement(979255..980319) Rickettsia parkeri str. Portsmouth 11994598 YP_005393261.1 CDS MC1_05695 NC_017044.1 980675 981907 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlE complement(980675..981907) Rickettsia parkeri str. Portsmouth 11994599 YP_005393262.1 CDS MC1_05700 NC_017044.1 982412 982624 R COG1278 Cold shock proteins; cold shock-like protein complement(982412..982624) Rickettsia parkeri str. Portsmouth 11994600 YP_005393263.1 CDS MC1_05705 NC_017044.1 983906 984019 D hypothetical protein 983906..984019 Rickettsia parkeri str. Portsmouth 11994602 YP_005393264.1 CDS ksgA NC_017044.1 984026 984931 R COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase complement(984026..984931) Rickettsia parkeri str. Portsmouth 11994603 YP_005393265.1 CDS MC1_05715 NC_017044.1 985083 985970 R COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein complement(985083..985970) Rickettsia parkeri str. Portsmouth 11994604 YP_005393266.1 CDS MC1_05720 NC_017044.1 986126 988246 R COG1452 Organic solvent tolerance protein OstA; Organic solvent tolerance protein-like protein complement(986126..988246) Rickettsia parkeri str. Portsmouth 11994605 YP_005393267.1 CDS xseA NC_017044.1 988535 989869 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 988535..989869 Rickettsia parkeri str. Portsmouth 11994606 YP_005393268.1 CDS MC1_05730 NC_017044.1 990058 990192 D hypothetical protein 990058..990192 Rickettsia parkeri str. Portsmouth 11994607 YP_005393269.1 CDS MC1_05735 NC_017044.1 990343 990546 D hypothetical protein 990343..990546 Rickettsia parkeri str. Portsmouth 11994608 YP_005393270.1 CDS MC1_05740 NC_017044.1 990543 991325 D COG0708 Exonuclease III; exodeoxyribonuclease III 990543..991325 Rickettsia parkeri str. Portsmouth 11994609 YP_005393271.1 CDS MC1_05745 NC_017044.1 991521 991787 D COG4095 Uncharacterized conserved protein; hypothetical protein 991521..991787 Rickettsia parkeri str. Portsmouth 11994611 YP_005393272.1 CDS MC1_05750 NC_017044.1 991791 993134 D COG1160 Predicted GTPases; GTP-binding protein Der 991791..993134 Rickettsia parkeri str. Portsmouth 11994612 YP_005393273.1 CDS MC1_05755 NC_017044.1 993285 994427 R COG1373 Predicted ATPase (AAA+ superfamily); Putative AAA+ superfamily ATPase complement(993285..994427) Rickettsia parkeri str. Portsmouth 11994613 YP_005393274.1 CDS MC1_05775 NC_017044.1 996451 996669 R hypothetical protein complement(996451..996669) Rickettsia parkeri str. Portsmouth 11994614 YP_005393275.1 CDS MC1_05780 NC_017044.1 996855 997076 R hypothetical protein complement(996855..997076) Rickettsia parkeri str. Portsmouth 11994615 YP_005393276.1 CDS MC1_05785 NC_017044.1 997073 998509 R COG0661 Predicted unusual protein kinase; ubiquinone biosynthesis protein complement(997073..998509) Rickettsia parkeri str. Portsmouth 11994616 YP_005393277.1 CDS ubiE NC_017044.1 998657 999403 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(998657..999403) Rickettsia parkeri str. Portsmouth 11994617 YP_005393278.1 CDS MC1_05795 NC_017044.1 999432 1000253 D COG0266 Formamidopyrimidine-DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 999432..1000253 Rickettsia parkeri str. Portsmouth 11994618 YP_005393279.1 CDS MC1_05800 NC_017044.1 1000327 1001019 D COG0836 Mannose-1-phosphate guanylyltransferase.; mannose-1-phosphate guanylyltransferase 1000327..1001019 Rickettsia parkeri str. Portsmouth 11994619 YP_005393280.1 CDS MC1_05815 NC_017044.1 1001552 1001806 D hypothetical protein 1001552..1001806 Rickettsia parkeri str. Portsmouth 11994620 YP_005393281.1 CDS MC1_05820 NC_017044.1 1002195 1002443 D hypothetical protein 1002195..1002443 Rickettsia parkeri str. Portsmouth 11994621 YP_005393282.1 CDS MC1_05840 NC_017044.1 1003986 1004204 R COG2958 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1003986..1004204) Rickettsia parkeri str. Portsmouth 11994622 YP_005393283.1 CDS MC1_05845 NC_017044.1 1004454 1004540 R hypothetical protein complement(1004454..1004540) Rickettsia parkeri str. Portsmouth 11994623 YP_005393284.1 CDS MC1_05850 NC_017044.1 1004519 1004653 R hypothetical protein complement(1004519..1004653) Rickettsia parkeri str. Portsmouth 11994624 YP_005393285.1 CDS MC1_05855 NC_017044.1 1004869 1005021 R hypothetical protein complement(1004869..1005021) Rickettsia parkeri str. Portsmouth 11994625 YP_005393286.1 CDS MC1_05860 NC_017044.1 1005067 1005987 R COG0084 Mg-dependent DNase; deoxyribonuclease TatD complement(1005067..1005987) Rickettsia parkeri str. Portsmouth 11994626 YP_005393287.1 CDS MC1_05865 NC_017044.1 1006040 1007566 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1006040..1007566) Rickettsia parkeri str. Portsmouth 11994627 YP_005393288.1 CDS tmk NC_017044.1 1007563 1008174 R COG0125 Thymidylate kinase; thymidylate kinase complement(1007563..1008174) Rickettsia parkeri str. Portsmouth 11994628 YP_005393289.1 CDS MC1_05875 NC_017044.1 1008433 1009800 D COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 1008433..1009800 Rickettsia parkeri str. Portsmouth 11994629 YP_005393290.1 CDS ubiA NC_017044.1 1009951 1010799 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; 4-hydroxybenzoate polyprenyltransferase complement(1009951..1010799) Rickettsia parkeri str. Portsmouth 11994630 YP_005393291.1 CDS valS NC_017044.1 1011914 1014352 D COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase 1011914..1014352 Rickettsia parkeri str. Portsmouth 11994631 YP_005393292.1 CDS MC1_05900 NC_017044.1 1014321 1015121 D COG3475 LPS biosynthesis protein; LicD family protein 1014321..1015121 Rickettsia parkeri str. Portsmouth 11994632 YP_005393293.1 CDS MC1_05915 NC_017044.1 1016869 1018155 D COG1322 Uncharacterized protein conserved in bacteria; RmuC family protein 1016869..1018155 Rickettsia parkeri str. Portsmouth 11994633 YP_005393294.1 CDS MC1_05920 NC_017044.1 1018285 1018512 D hypothetical protein 1018285..1018512 Rickettsia parkeri str. Portsmouth 11994634 YP_005393295.1 CDS MC1_05925 NC_017044.1 1018576 1019082 D alpha-(1,3)-fucosyltransferase 1018576..1019082 Rickettsia parkeri str. Portsmouth 11994635 YP_005393296.1 CDS MC1_05930 NC_017044.1 1019405 1019722 D COG3306 Glycosyltransferase involved in LPS biosynthesis; LPS biosynthesis glycosyltransferase 1019405..1019722 Rickettsia parkeri str. Portsmouth 11994636 YP_005393297.1 CDS MC1_05955 NC_017044.1 1021720 1021857 D COG1090 Predicted nucleoside-diphosphate sugar epimerase; Putative oxidoreductase protein 1021720..1021857 Rickettsia parkeri str. Portsmouth 11994637 YP_005393298.1 CDS MC1_05960 NC_017044.1 1022400 1023005 D oxidoreductase protein 1022400..1023005 Rickettsia parkeri str. Portsmouth 11994638 YP_005393299.1 CDS MC1_05965 NC_017044.1 1023075 1023383 D Putative integral membrane protein 1023075..1023383 Rickettsia parkeri str. Portsmouth 11994639 YP_005393300.1 CDS clpX NC_017044.1 1023620 1024897 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1023620..1024897) Rickettsia parkeri str. Portsmouth 11994640 YP_005393301.1 CDS MC1_05975 NC_017044.1 1024934 1025485 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Ribosomal-protein-alanine acetyltransferase complement(1024934..1025485) Rickettsia parkeri str. Portsmouth 11994641 YP_005393302.1 CDS MC1_05980 NC_017044.1 1025645 1026331 R COG0603 Predicted PP-loop superfamily ATPase; Trans-regulatory protein ExsB complement(1025645..1026331) Rickettsia parkeri str. Portsmouth 11994642 YP_005393303.1 CDS MC1_05985 NC_017044.1 1026328 1026672 R COG1598 Uncharacterized conserved protein; hypothetical protein complement(1026328..1026672) Rickettsia parkeri str. Portsmouth 11994643 YP_005393304.1 CDS MC1_05990 NC_017044.1 1026659 1026826 R hypothetical protein complement(1026659..1026826) Rickettsia parkeri str. Portsmouth 11994644 YP_005393305.1 CDS MC1_06000 NC_017044.1 1027286 1029016 D COG1132 ABC-type multidrug transport system, ATPase and permease components. Potentially inactive due to overlap with tRNA; Multidrug resistance protein 1027286..1029016 Rickettsia parkeri str. Portsmouth 11994646 YP_005393306.1 CDS MC1_06005 NC_017044.1 1029319 1029567 D hypothetical protein 1029319..1029567 Rickettsia parkeri str. Portsmouth 11994647 YP_005393307.1 CDS MC1_06010 NC_017044.1 1030235 1031410 D COG0477 Permeases of the major facilitator superfamily; MFS-type bicyclomycin resistance protein 1030235..1031410 Rickettsia parkeri str. Portsmouth 11994648 YP_005393308.1 CDS MC1_06015 NC_017044.1 1031592 1032842 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein releasing system, transmembrane protein 1031592..1032842 Rickettsia parkeri str. Portsmouth 11994649 YP_005393309.1 CDS MC1_06020 NC_017044.1 1032835 1033500 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein releasing system ATP-binding protein LolD 1032835..1033500 Rickettsia parkeri str. Portsmouth 11994650 YP_005393310.1 CDS MC1_06025 NC_017044.1 1033719 1035620 D hypothetical protein 1033719..1035620 Rickettsia parkeri str. Portsmouth 11994651 YP_005393311.1 CDS MC1_06030 NC_017044.1 1035695 1036969 D COG4536 Putative Mg2+ and Co2+ transporter CorB; magnesium and cobalt efflux protein 1035695..1036969 Rickettsia parkeri str. Portsmouth 11994652 YP_005393312.1 CDS MC1_06035 NC_017044.1 1037292 1038950 D COG1138 Cytochrome c biogenesis factor; Cytochrome c-type biogenesis protein ccmF 1037292..1038950 Rickettsia parkeri str. Portsmouth 11994653 YP_005393313.1 CDS MC1_06040 NC_017044.1 1038947 1039237 R hypothetical protein complement(1038947..1039237) Rickettsia parkeri str. Portsmouth 11994655 YP_005393314.1 CDS MC1_06045 NC_017044.1 1039311 1039418 R hypothetical protein complement(1039311..1039418) Rickettsia parkeri str. Portsmouth 11994656 YP_005393315.1 CDS MC1_06050 NC_017044.1 1039428 1039781 R COG0457 FOG: TPR repeat; hypothetical protein complement(1039428..1039781) Rickettsia parkeri str. Portsmouth 11994657 YP_005393316.1 CDS MC1_06055 NC_017044.1 1039798 1039905 R hypothetical protein complement(1039798..1039905) Rickettsia parkeri str. Portsmouth 11994658 YP_005393317.1 CDS MC1_06060 NC_017044.1 1040185 1041132 R hypothetical protein complement(1040185..1041132) Rickettsia parkeri str. Portsmouth 11994659 YP_005393318.1 CDS MC1_06065 NC_017044.1 1041549 1046513 R COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; outer membrane protein OmpB complement(1041549..1046513) Rickettsia parkeri str. Portsmouth 11994660 YP_005393319.1 CDS MC1_06080 NC_017044.1 1047829 1048773 R COG1472 Beta-glucosidase-related glycosidases; Beta-glucosidase complement(1047829..1048773) Rickettsia parkeri str. Portsmouth 11994661 YP_005393320.1 CDS MC1_06085 NC_017044.1 1048816 1049112 R COG0789 Predicted transcriptional regulators; hypothetical protein complement(1048816..1049112) Rickettsia parkeri str. Portsmouth 11994662 YP_005393321.1 CDS MC1_06090 NC_017044.1 1049328 1049615 R COG0776 Bacterial nucleoid DNA-binding protein; Integration host factor alpha-subunit complement(1049328..1049615) Rickettsia parkeri str. Portsmouth 11994663 YP_005393322.1 CDS MC1_06095 NC_017044.1 1049762 1050229 R hypothetical protein complement(1049762..1050229) Rickettsia parkeri str. Portsmouth 11994664 YP_005393323.1 CDS MC1_06100 NC_017044.1 1050739 1051209 D COG1225 Peroxiredoxin; Bacterioferritin comigratory protein 1050739..1051209 Rickettsia parkeri str. Portsmouth 11994665 YP_005393324.1 CDS MC1_06105 NC_017044.1 1051329 1052201 R COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase complement(1051329..1052201) Rickettsia parkeri str. Portsmouth 11994666 YP_005393325.1 CDS lpxK NC_017044.1 1052176 1053141 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1052176..1053141) Rickettsia parkeri str. Portsmouth 11994667 YP_005393326.1 CDS MC1_06115 NC_017044.1 1053145 1053999 R COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein complement(1053145..1053999) Rickettsia parkeri str. Portsmouth 11994668 YP_005393327.1 CDS MC1_06120 NC_017044.1 1053999 1054787 R COG2961 Protein involved in catabolism of external DNA; protein involved in external DNA uptake complement(1053999..1054787) Rickettsia parkeri str. Portsmouth 11994669 YP_005393328.1 CDS ligA NC_017044.1 1055499 1057568 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(1055499..1057568) Rickettsia parkeri str. Portsmouth 11994670 YP_005393329.1 CDS MC1_06130 NC_017044.1 1057670 1057795 R COG2161 Antitoxin of toxin-antitoxin stability system; hypothetical protein complement(1057670..1057795) Rickettsia parkeri str. Portsmouth 11994671 YP_005393330.1 CDS tgt NC_017044.1 1057854 1058939 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(1057854..1058939) Rickettsia parkeri str. Portsmouth 11994672 YP_005393331.1 CDS MC1_06140 NC_017044.1 1059563 1059862 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp 3-pyrophosphohydrolase 1059563..1059862 Rickettsia parkeri str. Portsmouth 11994673 YP_005393332.1 CDS MC1_06145 NC_017044.1 1060229 1060405 R proline/betaine transporter complement(1060229..1060405) Rickettsia parkeri str. Portsmouth 11994674 YP_005393333.1 CDS MC1_06160 NC_017044.1 1061388 1061513 R proline/betaine transporter complement(1061388..1061513) Rickettsia parkeri str. Portsmouth 11994675 YP_005393334.1 CDS MC1_06165 NC_017044.1 1061882 1062454 D hypothetical protein 1061882..1062454 Rickettsia parkeri str. Portsmouth 11994676 YP_005393335.1 CDS MC1_06180 NC_017044.1 1063521 1063970 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transporter substrate binding protein complement(1063521..1063970) Rickettsia parkeri str. Portsmouth 11994677 YP_005393336.1 CDS MC1_06185 NC_017044.1 1063995 1064294 R COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit; hypothetical protein complement(1063995..1064294) Rickettsia parkeri str. Portsmouth 11994678 YP_005393337.1 CDS rnhA NC_017044.1 1064282 1064749 R COG0328 Ribonuclease HI; ribonuclease H complement(1064282..1064749) Rickettsia parkeri str. Portsmouth 11994679 YP_005393338.1 CDS MC1_06195 NC_017044.1 1064749 1065222 R COG3814 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1064749..1065222) Rickettsia parkeri str. Portsmouth 11994680 YP_005393339.1 CDS MC1_06200 NC_017044.1 1066002 1066814 D COG3494 Uncharacterized protein conserved in bacteria; hypothetical protein 1066002..1066814 Rickettsia parkeri str. Portsmouth 11994681 YP_005393340.1 CDS coaE NC_017044.1 1066808 1067383 D COG0237 Dephospho-CoA kinase; dephospho-CoA kinase 1066808..1067383 Rickettsia parkeri str. Portsmouth 11994682 YP_005393341.1 CDS MC1_06210 NC_017044.1 1067371 1068060 D COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 1067371..1068060 Rickettsia parkeri str. Portsmouth 11994683 YP_005393342.1 CDS MC1_06215 NC_017044.1 1068187 1068909 D COG3346 Uncharacterized conserved protein; Surfeit locus protein 1 1068187..1068909 Rickettsia parkeri str. Portsmouth 11994684 YP_005393343.1 CDS MC1_06220 NC_017044.1 1068965 1071433 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); ATP-dependent helicase 1068965..1071433 Rickettsia parkeri str. Portsmouth 11994685 YP_005393344.1 CDS MC1_06225 NC_017044.1 1071550 1071726 R hypothetical protein complement(1071550..1071726) Rickettsia parkeri str. Portsmouth 11994686 YP_005393345.1 CDS MC1_06240 NC_017044.1 1072694 1073638 D COG0331 (acyl-carrier-protein) S-malonyltransferase; acyl-carrier-protein S-malonyltransferase 1072694..1073638 Rickettsia parkeri str. Portsmouth 11994687 YP_005393346.1 CDS MC1_06245 NC_017044.1 1073993 1074103 D hypothetical protein 1073993..1074103 Rickettsia parkeri str. Portsmouth 11994688 YP_005393347.1 CDS MC1_06250 NC_017044.1 1074450 1074764 D hypothetical protein 1074450..1074764 Rickettsia parkeri str. Portsmouth 11994689 YP_005393348.1 CDS MC1_06255 NC_017044.1 1075209 1075676 R COG4992 Ornithine/acetylornithine aminotransferase; hypothetical protein complement(1075209..1075676) Rickettsia parkeri str. Portsmouth 11994691 YP_005393349.1 CDS MC1_06260 NC_017044.1 1076094 1076249 D hypothetical protein 1076094..1076249 Rickettsia parkeri str. Portsmouth 11994692 YP_005393350.1 CDS MC1_06265 NC_017044.1 1077180 1077428 D hypothetical protein 1077180..1077428 Rickettsia parkeri str. Portsmouth 11994693 YP_005393351.1 CDS MC1_06270 NC_017044.1 1077658 1077864 D COG0666 FOG: Ankyrin repeat; ankyrin repeat-containing protein 1077658..1077864 Rickettsia parkeri str. Portsmouth 11994694 YP_005393352.1 CDS MC1_06275 NC_017044.1 1078384 1078617 D hypothetical protein 1078384..1078617 Rickettsia parkeri str. Portsmouth 11994695 YP_005393353.1 CDS MC1_06295 NC_017044.1 1079856 1080209 R hypothetical protein complement(1079856..1080209) Rickettsia parkeri str. Portsmouth 11994696 YP_005393354.1 CDS MC1_06300 NC_017044.1 1080254 1080622 R hypothetical protein complement(1080254..1080622) Rickettsia parkeri str. Portsmouth 11994697 YP_005393355.1 CDS MC1_06305 NC_017044.1 1080629 1081360 R superfamily I DNA/RNA helicase complement(1080629..1081360) Rickettsia parkeri str. Portsmouth 11994698 YP_005393356.1 CDS MC1_06310 NC_017044.1 1081382 1081552 R hypothetical protein complement(1081382..1081552) Rickettsia parkeri str. Portsmouth 11994700 YP_005393357.1 CDS MC1_06315 NC_017044.1 1081578 1081799 R hypothetical protein complement(1081578..1081799) Rickettsia parkeri str. Portsmouth 11994701 YP_005393358.1 CDS MC1_06320 NC_017044.1 1081814 1081993 R hypothetical protein complement(1081814..1081993) Rickettsia parkeri str. Portsmouth 11994702 YP_005393359.1 CDS MC1_06325 NC_017044.1 1082356 1082631 D hypothetical protein 1082356..1082631 Rickettsia parkeri str. Portsmouth 11994703 YP_005393360.1 CDS MC1_06330 NC_017044.1 1082922 1084016 R COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(1082922..1084016) Rickettsia parkeri str. Portsmouth 11994704 YP_005393361.1 CDS MC1_06335 NC_017044.1 1084093 1084266 R poly-beta-hydroxybutyrate polymerase complement(1084093..1084266) Rickettsia parkeri str. Portsmouth 11994705 YP_005393362.1 CDS MC1_06350 NC_017044.1 1085323 1086822 D COG3202 ATP/ADP translocase; ATP/ADP translocase 1085323..1086822 Rickettsia parkeri str. Portsmouth 11994706 YP_005393363.1 CDS MC1_06355 NC_017044.1 1087345 1087716 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; (di)nucleoside polyphosphate hydrolase complement(1087345..1087716) Rickettsia parkeri str. Portsmouth 11994707 YP_005393364.1 CDS MC1_06360 NC_017044.1 1087786 1087899 R (di)nucleoside polyphosphate hydrolase complement(1087786..1087899) Rickettsia parkeri str. Portsmouth 11994708 YP_005393365.1 CDS MC1_06365 NC_017044.1 1088117 1088338 D hypothetical protein 1088117..1088338 Rickettsia parkeri str. Portsmouth 11994709 YP_005393366.1 CDS MC1_06370 NC_017044.1 1088391 1089290 R COG1253 Hemolysins and related proteins containing CBS domains; hemolysin complement(1088391..1089290) Rickettsia parkeri str. Portsmouth 11994710 YP_005393367.1 CDS MC1_06375 NC_017044.1 1089307 1089810 R COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein complement(1089307..1089810) Rickettsia parkeri str. Portsmouth 11994711 YP_005393368.1 CDS MC1_06380 NC_017044.1 1089837 1089980 R hypothetical protein complement(1089837..1089980) Rickettsia parkeri str. Portsmouth 11994712 YP_005393369.1 CDS MC1_06385 NC_017044.1 1090496 1091386 R COG0320 Lipoate synthase; lipoyl synthase complement(1090496..1091386) Rickettsia parkeri str. Portsmouth 11994713 YP_005393370.1 CDS glyA NC_017044.1 1091379 1092641 R COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(1091379..1092641) Rickettsia parkeri str. Portsmouth 11994714 YP_005393371.1 CDS MC1_06395 NC_017044.1 1092756 1093406 R COG0400 Predicted esterase; serine esterase complement(1092756..1093406) Rickettsia parkeri str. Portsmouth 11994715 YP_005393372.1 CDS MC1_06400 NC_017044.1 1093562 1093885 R COG0278 Glutaredoxin-related protein; glutaredoxin-like protein grla complement(1093562..1093885) Rickettsia parkeri str. Portsmouth 11994716 YP_005393373.1 CDS MC1_06405 NC_017044.1 1093935 1094576 D COG0177 Predicted EndoIII-related endonuclease; endonuclease III 1093935..1094576 Rickettsia parkeri str. Portsmouth 11994717 YP_005393374.1 CDS MC1_06410 NC_017044.1 1094641 1095180 R hypothetical protein complement(1094641..1095180) Rickettsia parkeri str. Portsmouth 11994718 YP_005393375.1 CDS MC1_06425 NC_017044.1 1096248 1096358 D hypothetical protein 1096248..1096358 Rickettsia parkeri str. Portsmouth 11994719 YP_005393376.1 CDS MC1_06430 NC_017044.1 1096431 1097033 R hypothetical protein complement(1096431..1097033) Rickettsia parkeri str. Portsmouth 11994720 YP_005393377.1 CDS MC1_06435 NC_017044.1 1097081 1097317 R hypothetical protein complement(1097081..1097317) Rickettsia parkeri str. Portsmouth 11994721 YP_005393378.1 CDS MC1_06440 NC_017044.1 1097393 1098238 R COG0313 Predicted methyltransferases; Putative methyltransferase complement(1097393..1098238) Rickettsia parkeri str. Portsmouth 11994722 YP_005393379.1 CDS MC1_06445 NC_017044.1 1098263 1099381 D COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; ABC transporter substrate-binding protein 1098263..1099381 Rickettsia parkeri str. Portsmouth 11994723 YP_005393380.1 CDS tatA NC_017044.1 1099617 1099778 R COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein A complement(1099617..1099778) Rickettsia parkeri str. Portsmouth 11994724 YP_005393381.1 CDS MC1_06455 NC_017044.1 1099859 1100458 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 1099859..1100458 Rickettsia parkeri str. Portsmouth 11994725 YP_005393382.1 CDS rplU NC_017044.1 1100547 1100864 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 1100547..1100864 Rickettsia parkeri str. Portsmouth 11994726 YP_005393383.1 CDS rpmA NC_017044.1 1100889 1101149 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 1100889..1101149 Rickettsia parkeri str. Portsmouth 11994727 YP_005393384.1 CDS MC1_06470 NC_017044.1 1101434 1102639 D COG0527 Aspartokinases; aspartate kinase 1101434..1102639 Rickettsia parkeri str. Portsmouth 11994728 YP_005393385.1 CDS MC1_06475 NC_017044.1 1102923 1103417 D COG1396 Predicted transcriptional regulators; hypothetical protein 1102923..1103417 Rickettsia parkeri str. Portsmouth 11994729 YP_005393386.1 CDS MC1_06480 NC_017044.1 1103809 1104045 D COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; hypothetical protein 1103809..1104045 Rickettsia parkeri str. Portsmouth 11994730 YP_005393387.1 CDS MC1_06485 NC_017044.1 1104162 1104323 D Putative Zn-dependent hydrolases of the beta-lactamase fold family protein 1104162..1104323 Rickettsia parkeri str. Portsmouth 11994731 YP_005393388.1 CDS MC1_06500 NC_017044.1 1105114 1106355 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter complement(1105114..1106355) Rickettsia parkeri str. Portsmouth 11994732 YP_005393389.1 CDS MC1_06505 NC_017044.1 1106683 1107000 R COG3027 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1106683..1107000) Rickettsia parkeri str. Portsmouth 11994733 YP_005393390.1 CDS MC1_06510 NC_017044.1 1107003 1107350 R hypothetical protein complement(1107003..1107350) Rickettsia parkeri str. Portsmouth 11994734 YP_005393391.1 CDS MC1_06515 NC_017044.1 1107357 1107713 R COG1426 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1107357..1107713) Rickettsia parkeri str. Portsmouth 11994735 YP_005393392.1 CDS MC1_06520 NC_017044.1 1107717 1112468 R COG2902 NAD-specific glutamate dehydrogenase; NAD-specific glutamate dehydrogenase complement(1107717..1112468) Rickettsia parkeri str. Portsmouth 11994736 YP_005393393.1 CDS trmE NC_017044.1 1112553 1113890 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1112553..1113890 Rickettsia parkeri str. Portsmouth 11994737 YP_005393394.1 CDS MC1_06530 NC_017044.1 1114284 1115579 D hypothetical protein 1114284..1115579 Rickettsia parkeri str. Portsmouth 11994738 YP_005393395.1 CDS MC1_06535 NC_017044.1 1116213 1116614 R COG0477 Permeases of the major facilitator superfamily; hypothetical protein complement(1116213..1116614) Rickettsia parkeri str. Portsmouth 11994739 YP_005393396.1 CDS MC1_06540 NC_017044.1 1116625 1116873 R COG0477 Permeases of the major facilitator superfamily; hypothetical protein complement(1116625..1116873) Rickettsia parkeri str. Portsmouth 11994740 YP_005393397.1 CDS MC1_06545 NC_017044.1 1116966 1117109 R hypothetical protein complement(1116966..1117109) Rickettsia parkeri str. Portsmouth 11994741 YP_005393398.1 CDS MC1_06550 NC_017044.1 1117350 1117760 R COG0477 Permeases of the major facilitator superfamily; putative multidrug resistance protein complement(1117350..1117760) Rickettsia parkeri str. Portsmouth 11994742 YP_005393399.1 CDS recA NC_017044.1 1118061 1119092 D COG0468 RecA/RadA recombinase; recombinase A 1118061..1119092 Rickettsia parkeri str. Portsmouth 11994743 YP_005393400.1 CDS fabG NC_017044.1 1119085 1119810 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase 1119085..1119810 Rickettsia parkeri str. Portsmouth 11994744 YP_005393401.1 CDS acpP NC_017044.1 1119989 1120234 D COG0236 Acyl carrier protein; acyl carrier protein 1119989..1120234 Rickettsia parkeri str. Portsmouth 11994745 YP_005393402.1 CDS MC1_06570 NC_017044.1 1120267 1121553 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 1120267..1121553 Rickettsia parkeri str. Portsmouth 11994746 YP_005393403.1 CDS MC1_06575 NC_017044.1 1121835 1123616 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 1121835..1123616 Rickettsia parkeri str. Portsmouth 11994747 YP_005393404.1 CDS MC1_06590 NC_017044.1 1124778 1125008 D hypothetical protein 1124778..1125008 Rickettsia parkeri str. Portsmouth 11994748 YP_005393405.1 CDS gmk NC_017044.1 1126249 1126938 R COG0194 Guanylate kinase; guanylate kinase complement(1126249..1126938) Rickettsia parkeri str. Portsmouth 11994749 YP_005393406.1 CDS MC1_06610 NC_017044.1 1127079 1127315 R COG1396 Predicted transcriptional regulators; hypothetical protein complement(1127079..1127315) Rickettsia parkeri str. Portsmouth 11994750 YP_005393407.1 CDS MC1_06615 NC_017044.1 1127664 1128503 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1127664..1128503) Rickettsia parkeri str. Portsmouth 11994751 YP_005393408.1 CDS MC1_06620 NC_017044.1 1128506 1129546 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1128506..1129546) Rickettsia parkeri str. Portsmouth 11994752 YP_005393409.1 CDS MC1_06625 NC_017044.1 1129757 1130845 R COG0795 Predicted permeases; putative permease complement(1129757..1130845) Rickettsia parkeri str. Portsmouth 11994753 YP_005393410.1 CDS MC1_06630 NC_017044.1 1131272 1131739 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1131272..1131739) Rickettsia parkeri str. Portsmouth 11994755 YP_005393411.1 CDS MC1_06635 NC_017044.1 1131955 1132197 D hypothetical protein 1131955..1132197 Rickettsia parkeri str. Portsmouth 11994756 YP_005393412.1 CDS MC1_06640 NC_017044.1 1132212 1133168 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase complement(1132212..1133168) Rickettsia parkeri str. Portsmouth 11994757 YP_005393413.1 CDS rpmF NC_017044.1 1133176 1133376 R COG0333 Ribosomal protein L32; 50S ribosomal protein L32 complement(1133176..1133376) Rickettsia parkeri str. Portsmouth 11994758 YP_005393414.1 CDS MC1_06650 NC_017044.1 1133472 1133945 D COG2913 Small protein A (tmRNA-binding); tmRNA-binding protein 1133472..1133945 Rickettsia parkeri str. Portsmouth 11994759 YP_005393415.1 CDS MC1_06655 NC_017044.1 1134149 1135060 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 1134149..1135060 Rickettsia parkeri str. Portsmouth 11994760 YP_005393416.1 CDS MC1_06660 NC_017044.1 1135224 1137851 D COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I 1135224..1137851 Rickettsia parkeri str. Portsmouth 11994761 YP_005393417.1 CDS MC1_06675 NC_017044.1 1139230 1139508 D hypothetical protein 1139230..1139508 Rickettsia parkeri str. Portsmouth 11994762 YP_005393418.1 CDS MC1_06680 NC_017044.1 1139547 1139807 D hypothetical protein 1139547..1139807 Rickettsia parkeri str. Portsmouth 11994764 YP_005393419.1 CDS MC1_06685 NC_017044.1 1139980 1140186 D hypothetical protein 1139980..1140186 Rickettsia parkeri str. Portsmouth 11994765 YP_005393420.1 CDS dnaE NC_017044.1 1140457 1144002 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1140457..1144002) Rickettsia parkeri str. Portsmouth 11994766 YP_005393421.1 CDS MC1_06695 NC_017044.1 1144189 1145487 R COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(1144189..1145487) Rickettsia parkeri str. Portsmouth 11994767 YP_005393422.1 CDS MC1_06700 NC_017044.1 1145736 1148246 D hypothetical protein 1145736..1148246 Rickettsia parkeri str. Portsmouth 11994768 YP_005393423.1 CDS MC1_06705 NC_017044.1 1148621 1149919 D COG0477 Permeases of the major facilitator superfamily; AmpG protein 1148621..1149919 Rickettsia parkeri str. Portsmouth 11994769 YP_005393424.1 CDS MC1_06710 NC_017044.1 1149984 1150739 D COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein TatC 1149984..1150739 Rickettsia parkeri str. Portsmouth 11994770 YP_005393425.1 CDS MC1_06715 NC_017044.1 1150717 1151994 D COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase 1150717..1151994 Rickettsia parkeri str. Portsmouth 11994771 YP_005393426.1 CDS MC1_06720 NC_017044.1 1152032 1152247 D hypothetical protein 1152032..1152247 Rickettsia parkeri str. Portsmouth 11994772 YP_005393427.1 CDS MC1_06725 NC_017044.1 1152332 1154764 D COG3451 Type IV secretory pathway, VirB4 components; virB4 protein 1152332..1154764 Rickettsia parkeri str. Portsmouth 11994773 YP_005393428.1 CDS MC1_06730 NC_017044.1 1154900 1158388 D hypothetical protein 1154900..1158388 Rickettsia parkeri str. Portsmouth 11994774 YP_005393429.1 CDS MC1_06735 NC_017044.1 1158393 1159298 D COG0861 Membrane protein TerC, possibly involved in tellurium resistance; tellurium resistance protein TerC 1158393..1159298 Rickettsia parkeri str. Portsmouth 11994775 YP_005393430.1 CDS MC1_06740 NC_017044.1 1159342 1160055 D COG3637 Opacity protein and related surface antigens; hypothetical protein 1159342..1160055 Rickettsia parkeri str. Portsmouth 11994776 YP_005393431.1 CDS MC1_06745 NC_017044.1 1160141 1161805 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1160141..1161805 Rickettsia parkeri str. Portsmouth 11994777 YP_005393432.1 CDS MC1_06750 NC_017044.1 1161905 1162570 D COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; Putative transcriptional regulator 1161905..1162570 Rickettsia parkeri str. Portsmouth 11994778 YP_005393433.1 CDS MC1_06755 NC_017044.1 1162603 1163220 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1162603..1163220 Rickettsia parkeri str. Portsmouth 11994779 YP_005393434.1 CDS MC1_06760 NC_017044.1 1163213 1163527 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1163213..1163527 Rickettsia parkeri str. Portsmouth 11994780 YP_005393435.1 CDS MC1_06765 NC_017044.1 1163560 1165500 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1163560..1165500 Rickettsia parkeri str. Portsmouth 11994781 YP_005393436.1 CDS MC1_06770 NC_017044.1 1165654 1167135 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1165654..1167135 Rickettsia parkeri str. Portsmouth 11994782 YP_005393437.1 CDS MC1_06775 NC_017044.1 1167549 1168124 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 1167549..1168124 Rickettsia parkeri str. Portsmouth 11994783 YP_005393438.1 CDS MC1_06780 NC_017044.1 1168609 1169088 R COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I complement(1168609..1169088) Rickettsia parkeri str. Portsmouth 11994784 YP_005393439.1 CDS MC1_06785 NC_017044.1 1169275 1170294 R COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H complement(1169275..1170294) Rickettsia parkeri str. Portsmouth 11994785 YP_005393440.1 CDS MC1_06790 NC_017044.1 1170416 1172431 R COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G complement(1170416..1172431) Rickettsia parkeri str. Portsmouth 11994786 YP_005393441.1 CDS MC1_06795 NC_017044.1 1172434 1172790 R COG3671 Predicted membrane protein; hypothetical protein complement(1172434..1172790) Rickettsia parkeri str. Portsmouth 11994787 YP_005393442.1 CDS MC1_06800 NC_017044.1 1172959 1175598 R COG1048 Aconitase A; aconitate hydratase complement(1172959..1175598) Rickettsia parkeri str. Portsmouth 11994788 YP_005393443.1 CDS atpC NC_017044.1 1175780 1176118 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1175780..1176118) Rickettsia parkeri str. Portsmouth 11994789 YP_005393444.1 CDS MC1_06810 NC_017044.1 1176176 1177597 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1176176..1177597) Rickettsia parkeri str. Portsmouth 11994790 YP_005393445.1 CDS MC1_06815 NC_017044.1 1177770 1178741 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1177770..1178741) Rickettsia parkeri str. Portsmouth 11994791 YP_005393446.1 CDS MC1_06820 NC_017044.1 1178874 1180406 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1178874..1180406) Rickettsia parkeri str. Portsmouth 11994792 YP_005393447.1 CDS MC1_06825 NC_017044.1 1180572 1181126 R COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta complement(1180572..1181126) Rickettsia parkeri str. Portsmouth 11994793 YP_005393448.1 CDS MC1_06830 NC_017044.1 1181286 1182665 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase complement(1181286..1182665) Rickettsia parkeri str. Portsmouth 11994794 YP_005393449.1 CDS MC1_06835 NC_017044.1 1182816 1182980 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); ferroxidase complement(1182816..1182980) Rickettsia parkeri str. Portsmouth 11994795 YP_005393450.1 CDS MC1_06855 NC_017044.1 1184629 1184931 R COG2602 Beta-lactamase class D; beta-lactamase complement(1184629..1184931) Rickettsia parkeri str. Portsmouth 11994796 YP_005393451.1 CDS MC1_06860 NC_017044.1 1185070 1185342 R COG2602 Beta-lactamase class D; beta-lactamase complement(1185070..1185342) Rickettsia parkeri str. Portsmouth 11994797 YP_005393452.1 CDS MC1_06865 NC_017044.1 1185504 1187876 R COG5009 Membrane carboxypeptidase/penicillin-binding protein; Penicillin-binding protein 1A complement(1185504..1187876) Rickettsia parkeri str. Portsmouth 11994798 YP_005393453.1 CDS MC1_06870 NC_017044.1 1187880 1189217 R COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase complement(1187880..1189217) Rickettsia parkeri str. Portsmouth 11994799 YP_005393454.1 CDS MC1_06875 NC_017044.1 1189640 1189855 R hypothetical protein complement(1189640..1189855) Rickettsia parkeri str. Portsmouth 11994800 YP_005393455.1 CDS MC1_06890 NC_017044.1 1190467 1190610 R hypothetical protein complement(1190467..1190610) Rickettsia parkeri str. Portsmouth 11994801 YP_005393456.1 CDS MC1_06895 NC_017044.1 1190650 1190799 R hypothetical protein complement(1190650..1190799) Rickettsia parkeri str. Portsmouth 11994802 YP_005393457.1 CDS MC1_06900 NC_017044.1 1190880 1191233 R hypothetical protein complement(1190880..1191233) Rickettsia parkeri str. Portsmouth 11994803 YP_005393458.1 CDS MC1_06905 NC_017044.1 1191403 1191648 D hypothetical protein 1191403..1191648 Rickettsia parkeri str. Portsmouth 11994804 YP_005393459.1 CDS MC1_06910 NC_017044.1 1191541 1192020 R COG3807 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1191541..1192020) Rickettsia parkeri str. Portsmouth 11994805 YP_005393460.1 CDS MC1_06915 NC_017044.1 1192013 1193740 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefB complement(1192013..1193740) Rickettsia parkeri str. Portsmouth 11994806 YP_005393461.1 CDS MC1_06920 NC_017044.1 1193737 1194063 R COG0799 Uncharacterized homolog of plant Iojap protein; Iojap-related protein complement(1193737..1194063) Rickettsia parkeri str. Portsmouth 11994807 YP_005393462.1 CDS MC1_06925 NC_017044.1 1194219 1194458 D COG0271 Stress-induced morphogen (activity unknown); BolA-like protein 1194219..1194458 Rickettsia parkeri str. Portsmouth 11994808 YP_005393463.1 CDS MC1_06945 NC_017044.1 1195811 1196041 R hypothetical protein complement(1195811..1196041) Rickettsia parkeri str. Portsmouth 11994809 YP_005393464.1 CDS MC1_06950 NC_017044.1 1196128 1196307 D hypothetical protein 1196128..1196307 Rickettsia parkeri str. Portsmouth 11994810 YP_005393465.1 CDS MC1_06960 NC_017044.1 1197427 1197891 R hypothetical protein complement(1197427..1197891) Rickettsia parkeri str. Portsmouth 11994811 YP_005393466.1 CDS MC1_06965 NC_017044.1 1197901 1198185 R outer membrane protein A complement(1197901..1198185) Rickettsia parkeri str. Portsmouth 11994812 YP_005393467.1 CDS MC1_06980 NC_017044.1 1200229 1200423 R hypothetical protein complement(1200229..1200423) Rickettsia parkeri str. Portsmouth 11994813 YP_005393468.1 CDS MC1_06985 NC_017044.1 1200399 1201124 R Cell surface antigen Sca9 complement(1200399..1201124) Rickettsia parkeri str. Portsmouth 11994814 YP_005393469.1 CDS MC1_06990 NC_017044.1 1201289 1201468 R Cell surface antigen Sca9 complement(1201289..1201468) Rickettsia parkeri str. Portsmouth 11994815 YP_005393470.1 CDS infA NC_017044.1 1202243 1202458 D COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 1202243..1202458 Rickettsia parkeri str. Portsmouth 11994817 YP_005393471.1 CDS MC1_07000 NC_017044.1 1202470 1203117 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 1202470..1203117 Rickettsia parkeri str. Portsmouth 11994818 YP_005393472.1 CDS MC1_07005 NC_017044.1 1203256 1203687 R COG1734 DnaK suppressor protein; DnaK suppressor protein complement(1203256..1203687) Rickettsia parkeri str. Portsmouth 11994819 YP_005393473.1 CDS xerC NC_017044.1 1203855 1204772 R COG0582 Integrase; site-specific tyrosine recombinase XerC complement(1203855..1204772) Rickettsia parkeri str. Portsmouth 11994820 YP_005393474.1 CDS MC1_07015 NC_017044.1 1204954 1205229 D hypothetical protein 1204954..1205229 Rickettsia parkeri str. Portsmouth 11994821 YP_005393475.1 CDS MC1_07020 NC_017044.1 1205277 1205879 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D complement(1205277..1205879) Rickettsia parkeri str. Portsmouth 11994822 YP_005393476.1 CDS MC1_07025 NC_017044.1 1206029 1206175 R COG3243 Poly(3-hydroxyalkanoate) synthetase; Poly(3-hydroxyalkanoate) synthetase complement(1206029..1206175) Rickettsia parkeri str. Portsmouth 11994823 YP_005393477.1 CDS MC1_07030 NC_017044.1 1206663 1208141 R COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-polyprenyl-4-hydroxybenzoate decarboxylase complement(1206663..1208141) Rickettsia parkeri str. Portsmouth 11994824 YP_005393478.1 CDS MC1_07035 NC_017044.1 1208294 1209868 R COG0760 Parvulin-like peptidyl-prolyl isomerase; parvulin-like peptidyl-prolyl isomerase complement(1208294..1209868) Rickettsia parkeri str. Portsmouth 11994826 YP_005393479.1 CDS MC1_07040 NC_017044.1 1210062 1217018 R outer memberane protein OmpA complement(1210062..1217018) Rickettsia parkeri str. Portsmouth 11994827 YP_005393480.1 CDS MC1_07045 NC_017044.1 1217655 1219889 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein FtsK complement(1217655..1219889) Rickettsia parkeri str. Portsmouth 11994828 YP_005393481.1 CDS MC1_07050 NC_017044.1 1220055 1220924 R COG1835 Predicted acyltransferases; Putative acyltransferase complement(1220055..1220924) Rickettsia parkeri str. Portsmouth 11994829 YP_005393482.1 CDS MC1_07055 NC_017044.1 1221085 1221864 D COG0024 Methionine aminopeptidase; methionine aminopeptidase 1221085..1221864 Rickettsia parkeri str. Portsmouth 11994830 YP_005393483.1 CDS MC1_07060 NC_017044.1 1222114 1222425 D COG2003 DNA repair proteins; DNA repair protein (RadC) 1222114..1222425 Rickettsia parkeri str. Portsmouth 11994831 YP_005393484.1 CDS MC1_07065 NC_017044.1 1222430 1222798 D COG2003 DNA repair proteins; DNA repair protein RadC 1222430..1222798 Rickettsia parkeri str. Portsmouth 11994832 YP_005393485.1 CDS MC1_07070 NC_017044.1 1222785 1223768 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 1222785..1223768 Rickettsia parkeri str. Portsmouth 11994833 YP_005393486.1 CDS MC1_07075 NC_017044.1 1223765 1224088 D hypothetical protein 1223765..1224088 Rickettsia parkeri str. Portsmouth 11994834 YP_005393487.1 CDS MC1_07080 NC_017044.1 1224482 1225219 R COG3637 Opacity protein and related surface antigens; hypothetical protein complement(1224482..1225219) Rickettsia parkeri str. Portsmouth 11994835 YP_005393488.1 CDS MC1_07085 NC_017044.1 1225466 1226140 R COG3637 Opacity protein and related surface antigens; hypothetical protein complement(1225466..1226140) Rickettsia parkeri str. Portsmouth 11994836 YP_005393489.1 CDS MC1_07090 NC_017044.1 1226439 1226789 R COG1146 Ferredoxin; ferredoxin complement(1226439..1226789) Rickettsia parkeri str. Portsmouth 11994837 YP_005393490.1 CDS MC1_07095 NC_017044.1 1226794 1227486 R COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme exporter protein C complement(1226794..1227486) Rickettsia parkeri str. Portsmouth 11994838 YP_005393491.1 CDS MC1_07100 NC_017044.1 1227501 1228007 R COG0590 Cytosine/adenosine deaminases; cytosine deaminase complement(1227501..1228007) Rickettsia parkeri str. Portsmouth 11994839 YP_005393492.1 CDS MC1_07105 NC_017044.1 1227988 1228893 R COG0053 Predicted Co/Zn/Cd cation transporters; CzcD protein complement(1227988..1228893) Rickettsia parkeri str. Portsmouth 11994840 YP_005393493.1 CDS MC1_07110 NC_017044.1 1229086 1229565 D COG4520 Surface antigen; 17 kD surface antigen 1229086..1229565 Rickettsia parkeri str. Portsmouth 11994841 YP_005393494.1 CDS MC1_07115 NC_017044.1 1229696 1230160 D COG1881 Phospholipid-binding protein; phosphatidylethanolamine-binding protein PEBP 1229696..1230160 Rickettsia parkeri str. Portsmouth 11994842 YP_005393495.1 CDS MC1_07120 NC_017044.1 1230302 1231003 D COG1121 ABC-type Mn/Zn transport systems, ATPase component; Zinc ABC transporter ATP-binding protein 1230302..1231003 Rickettsia parkeri str. Portsmouth 11994843 YP_005393496.1 CDS MC1_07125 NC_017044.1 1231100 1231444 R hypothetical protein complement(1231100..1231444) Rickettsia parkeri str. Portsmouth 11994844 YP_005393497.1 CDS MC1_07130 NC_017044.1 1231804 1232094 R hypothetical protein complement(1231804..1232094) Rickettsia parkeri str. Portsmouth 11994845 YP_005393498.1 CDS MC1_07135 NC_017044.1 1232262 1232612 R hypothetical protein complement(1232262..1232612) Rickettsia parkeri str. Portsmouth 11994846 YP_005393499.1 CDS MC1_07140 NC_017044.1 1232749 1232943 R hypothetical protein complement(1232749..1232943) Rickettsia parkeri str. Portsmouth 11994847 YP_005393500.1 CDS uvrA NC_017044.1 1233204 1236065 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(1233204..1236065) Rickettsia parkeri str. Portsmouth 11994848 YP_005393501.1 CDS MC1_07150 NC_017044.1 1236174 1236632 D COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 1236174..1236632 Rickettsia parkeri str. Portsmouth 11994849 YP_005393502.1 CDS MC1_07155 NC_017044.1 1236644 1237474 D DAP2 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein 1236644..1237474 Rickettsia parkeri str. Portsmouth 11994850 YP_005393503.1 CDS MC1_07160 NC_017044.1 1237625 1237807 D MFS type sugar transporter 1237625..1237807 Rickettsia parkeri str. Portsmouth 11994851 YP_005393504.1 CDS MC1_07165 NC_017044.1 1237909 1238115 R COG3772 Phage-related lysozyme (muraminidase); lysozyme complement(1237909..1238115) Rickettsia parkeri str. Portsmouth 11994852 YP_005393505.1 CDS MC1_07180 NC_017044.1 1239153 1239470 D COG1872 Uncharacterized conserved protein; hypothetical protein 1239153..1239470 Rickettsia parkeri str. Portsmouth 11994854 YP_005393506.1 CDS MC1_07185 NC_017044.1 1239614 1241479 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 1239614..1241479 Rickettsia parkeri str. Portsmouth 11994855 YP_005393507.1 CDS MC1_07190 NC_017044.1 1241658 1242902 D COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 5-aminolevulinate synthase 1241658..1242902 Rickettsia parkeri str. Portsmouth 11994856 YP_005393508.1 CDS MC1_07195 NC_017044.1 1243838 1244161 D hypothetical protein 1243838..1244161 Rickettsia parkeri str. Portsmouth 11994857 YP_005393509.1 CDS tig NC_017044.1 1244566 1245903 D COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor 1244566..1245903 Rickettsia parkeri str. Portsmouth 11994858 YP_005393510.1 CDS obgE NC_017044.1 1246008 1247000 R COG0536 Predicted GTPase; GTPase CgtA complement(1246008..1247000) Rickettsia parkeri str. Portsmouth 11994859 YP_005393511.1 CDS gltA NC_017044.1 1247109 1248416 R COG0372 Citrate synthase; type II citrate synthase complement(1247109..1248416) Rickettsia parkeri str. Portsmouth 11994860 YP_005393512.1 CDS MC1_07215 NC_017044.1 1248632 1248736 R hypothetical protein complement(1248632..1248736) Rickettsia parkeri str. Portsmouth 11994861 YP_005393513.1 CDS MC1_07220 NC_017044.1 1248736 1248855 R transcriptional regulator complement(1248736..1248855) Rickettsia parkeri str. Portsmouth 11994863 YP_005393514.1 CDS MC1_07225 NC_017044.1 1249099 1249884 R COG1573 Uracil-DNA glycosylase; uracil-DNA glycosylase complement(1249099..1249884) Rickettsia parkeri str. Portsmouth 11994864 YP_005393515.1 CDS MC1_07230 NC_017044.1 1249901 1250842 D COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase D 1249901..1250842 Rickettsia parkeri str. Portsmouth 11994865 YP_005393516.1 CDS MC1_07235 NC_017044.1 1251134 1251307 D hypothetical protein 1251134..1251307 Rickettsia parkeri str. Portsmouth 11994866 YP_005393517.1 CDS MC1_07240 NC_017044.1 1251395 1251670 D hypothetical protein 1251395..1251670 Rickettsia parkeri str. Portsmouth 11994867 YP_005393518.1 CDS MC1_07245 NC_017044.1 1251661 1252266 D COG1061 DNA or RNA helicases of superfamily II; hypothetical protein 1251661..1252266 Rickettsia parkeri str. Portsmouth 11994868 YP_005393519.1 CDS MC1_07250 NC_017044.1 1252295 1252480 D hypothetical protein 1252295..1252480 Rickettsia parkeri str. Portsmouth 11994869 YP_005393520.1 CDS MC1_07255 NC_017044.1 1252489 1254063 D COG2890 Methylase of polypeptide chain release factors; bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase 1252489..1254063 Rickettsia parkeri str. Portsmouth 11994870 YP_005393521.1 CDS MC1_07260 NC_017044.1 1254029 1254967 R COG0009 Putative translation factor (SUA5); Sua5/YciO/YrdC/YwlC family putative translation factor protein complement(1254029..1254967) Rickettsia parkeri str. Portsmouth 11994871 YP_005393522.1 CDS glyS NC_017044.1 1254964 1256976 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1254964..1256976) Rickettsia parkeri str. Portsmouth 11994872 YP_005393523.1 CDS glyQ NC_017044.1 1256955 1257821 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(1256955..1257821) Rickettsia parkeri str. Portsmouth 11994873 YP_005393524.1 CDS MC1_07275 NC_017044.1 1257853 1258260 R COG1487 Predicted nucleic acid-binding protein, contains PIN domain; toxin of toxin-antitoxin complement(1257853..1258260) Rickettsia parkeri str. Portsmouth 11994874 YP_005393525.1 CDS MC1_07280 NC_017044.1 1258257 1258502 R COG2161 Antitoxin of toxin-antitoxin stability system; Putative antitoxin of toxin-antitoxin (TA) system complement(1258257..1258502) Rickettsia parkeri str. Portsmouth 11994875 YP_005393526.1 CDS MC1_07285 NC_017044.1 1258589 1259218 R COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1258589..1259218) Rickettsia parkeri str. Portsmouth 11994876 YP_005393527.1 CDS MC1_07310 NC_017044.1 1260685 1261635 R hypothetical protein complement(1260685..1261635) Rickettsia parkeri str. Portsmouth 11994877 YP_005393528.1 CDS MC1_07315 NC_017044.1 1261645 1262280 R COG1474 Cdc6-related protein, AAA superfamily ATPase; hypothetical protein complement(1261645..1262280) Rickettsia parkeri str. Portsmouth 11994878 YP_005393529.1 CDS MC1_07320 NC_017044.1 1262355 1263926 R hypothetical protein complement(1262355..1263926) Rickettsia parkeri str. Portsmouth 11994879 YP_005393530.1 CDS alaS NC_017044.1 1264125 1266761 D COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase 1264125..1266761 Rickettsia parkeri str. Portsmouth 11994880 YP_005393531.1 CDS truA NC_017044.1 1266861 1267598 R COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A complement(1266861..1267598) Rickettsia parkeri str. Portsmouth 11994881 YP_005393532.1 CDS MC1_07335 NC_017044.1 1267694 1269598 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(1267694..1269598) Rickettsia parkeri str. Portsmouth 11994882 YP_005393533.1 CDS dnaG NC_017044.1 1269643 1271430 R COG0358 DNA primase (bacterial type); DNA primase complement(1269643..1271430) Rickettsia parkeri str. Portsmouth 11994883 YP_005393534.1 CDS MC1_07345 NC_017044.1 1271435 1272049 R COG0170 Dolichol kinase; dolichol kinase complement(1271435..1272049) Rickettsia parkeri str. Portsmouth 11994884 YP_005393535.1 CDS greA NC_017044.1 1272310 1272798 D COG0782 Transcription elongation factor; transcription elongation factor GreA 1272310..1272798 Rickettsia parkeri str. Portsmouth 11994885 YP_005393536.1 CDS MC1_07355 NC_017044.1 1272957 1273355 R COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon component.; NAD(P) transhydrogenase subunit alpha complement(1272957..1273355) Rickettsia parkeri str. Portsmouth 11994886 YP_005393537.1 CDS MC1_07360 NC_017044.1 1273352 1274476 R COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon component.; NAD(P) transhydrogenase subunit alpha complement(1273352..1274476) Rickettsia parkeri str. Portsmouth 11994887 YP_005393538.1 CDS MC1_07365 NC_017044.1 1274552 1275190 D COG2834 Outer membrane lipoprotein-sorting protein; outer membrane lipoprotein-sorting protein LolA 1274552..1275190 Rickettsia parkeri str. Portsmouth 11994888 YP_005393539.1 CDS MC1_07370 NC_017044.1 1275420 1276949 D COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau 1275420..1276949 Rickettsia parkeri str. Portsmouth 11994889 YP_005393540.1 CDS MC1_07375 NC_017044.1 1276969 1277292 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 1276969..1277292 Rickettsia parkeri str. Portsmouth 11994890 YP_005393541.1 CDS MC1_07380 NC_017044.1 1277645 1277767 R hypothetical protein complement(1277645..1277767) Rickettsia parkeri str. Portsmouth 11994891 YP_005393542.1 CDS MC1_07385 NC_017044.1 1277764 1277958 R hypothetical protein complement(1277764..1277958) Rickettsia parkeri str. Portsmouth 11994892 YP_005393543.1 CDS MC1_07390 NC_017044.1 1278157 1278852 R COG3577 Predicted aspartyl protease; putative aspartyl protease complement(1278157..1278852) Rickettsia parkeri str. Portsmouth 11994893 YP_005393544.1 CDS MC1_07395 NC_017044.1 1278914 1279132 R hypothetical protein complement(1278914..1279132) Rickettsia parkeri str. Portsmouth 11994894 YP_005393545.1 CDS MC1_07400 NC_017044.1 1279224 1279451 R hypothetical protein complement(1279224..1279451) Rickettsia parkeri str. Portsmouth 11994895 YP_005393546.1 CDS MC1_07405 NC_017044.1 1279688 1279774 R hypothetical protein complement(1279688..1279774) Rickettsia parkeri str. Portsmouth 11994896 YP_005393547.1 CDS MC1_07410 NC_017044.1 1279767 1279892 R beta-lactamase AmpC complement(1279767..1279892) Rickettsia parkeri str. Portsmouth 11994897 YP_005393548.1 CDS MC1_07415 NC_017044.1 1280046 1280285 R COG2161 Antitoxin of toxin-antitoxin stability system; toxin-antitoxin (TA) system antitoxin StbD complement(1280046..1280285) Rickettsia parkeri str. Portsmouth 11994898 YP_005393549.1 CDS MC1_07420 NC_017044.1 1280491 1281213 R COG1126 ABC-type polar amino acid transport system, ATPase component; glutamine ABC transporter ATP-binding protein complement(1280491..1281213) Rickettsia parkeri str. Portsmouth 11994899 YP_005393550.1 CDS MC1_07425 NC_017044.1 1281217 1281981 R COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; beta-lactamase complement(1281217..1281981) Rickettsia parkeri str. Portsmouth 11994900 YP_005393551.1 CDS MC1_07430 NC_017044.1 1281996 1282643 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 1281996..1282643 Rickettsia parkeri str. Portsmouth 11994901 YP_005393552.1 CDS MC1_07435 NC_017044.1 1282737 1283000 D COG3077 DNA-damage-inducible protein J; DNA-damage-inducible protein J 1282737..1283000 Rickettsia parkeri str. Portsmouth 11994902 YP_005393553.1 CDS MC1_07440 NC_017044.1 1283090 1283233 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 1283090..1283233 Rickettsia parkeri str. Portsmouth 11994903 YP_005393554.1 CDS MC1_07445 NC_017044.1 1283369 1284451 D COG0795 Predicted permeases; hypothetical protein 1283369..1284451 Rickettsia parkeri str. Portsmouth 11994904 YP_005393555.1 CDS MC1_07450 NC_017044.1 1284457 1284921 R COG2927 DNA polymerase III, chi subunit; DNA polymerase III subunit chi complement(1284457..1284921) Rickettsia parkeri str. Portsmouth 11994905 YP_005393556.1 CDS MC1_07455 NC_017044.1 1285121 1286266 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(1285121..1286266) Rickettsia parkeri str. Portsmouth 11994907 YP_005393557.1 CDS MC1_07460 NC_017044.1 1286270 1286896 R COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme S subunit complement(1286270..1286896) Rickettsia parkeri str. Portsmouth 11994908 YP_005393558.1 CDS MC1_07465 NC_017044.1 1287009 1287206 R hypothetical protein complement(1287009..1287206) Rickettsia parkeri str. Portsmouth 11994909 YP_005393559.1 CDS MC1_07490 NC_017044.1 1288681 1288902 R COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; hypothetical protein complement(1288681..1288902) Rickettsia parkeri str. Portsmouth 11994910 YP_005393560.1 CDS MC1_07495 NC_017044.1 1288908 1289153 D COG3004 Na+/H+ antiporter; hypothetical protein 1288908..1289153 Rickettsia parkeri str. Portsmouth 11994911 YP_005393561.1 CDS MC1_07510 NC_017044.1 1289984 1290499 R COG1434 Uncharacterized conserved protein; hypothetical protein complement(1289984..1290499) Rickettsia parkeri str. Portsmouth 11994912 YP_005393562.1 CDS MC1_07515 NC_017044.1 1290496 1291125 R COG0321 Lipoate-protein ligase B; lipoate-protein ligase B complement(1290496..1291125) Rickettsia parkeri str. Portsmouth 11994913 YP_005393563.1 CDS MC1_07520 NC_017044.1 1291122 1291865 R COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase complement(1291122..1291865) Rickettsia parkeri str. Portsmouth 11994914 YP_005393564.1 CDS rpsP NC_017044.1 1292361 1292696 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1292361..1292696) Rickettsia parkeri str. Portsmouth 11994917 YP_005393565.1 CDS rpmG NC_017044.1 1292713 1292883 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1292713..1292883) Rickettsia parkeri str. Portsmouth 11994918 YP_005393566.1 CDS mutL NC_017044.1 1293105 1294937 R COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein complement(1293105..1294937) Rickettsia parkeri str. Portsmouth 11994919 YP_005393567.1 CDS MC1_07540 NC_017044.1 1294934 1295086 R COG4391 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1294934..1295086) Rickettsia parkeri str. Portsmouth 11994920 YP_005393568.1 CDS MC1_07545 NC_017044.1 1295367 1295468 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); hypothetical protein 1295367..1295468 Rickettsia parkeri str. Portsmouth 11994921 YP_005393569.1 CDS MC1_07550 NC_017044.1 1295486 1295686 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 1295486..1295686 Rickettsia parkeri str. Portsmouth 11994922 YP_005393570.1 CDS MC1_07555 NC_017044.1 1295855 1296118 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 1295855..1296118 Rickettsia parkeri str. Portsmouth 11994923 YP_005393571.1 CDS MC1_07560 NC_017044.1 1297131 1298405 D COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 1297131..1298405 Rickettsia parkeri str. Portsmouth 11994924 YP_005393572.1 CDS MC1_07565 NC_017044.1 1298389 1299228 D COG0408 Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase 1298389..1299228 Rickettsia parkeri str. Portsmouth 11994925 MC1_t07582 tRNA MC1_t07582 NC_017044.1 12707 12782 R tRNA-Phe complement(12707..12782) Rickettsia parkeri str. Portsmouth 11995578 MC1_t07584 tRNA MC1_t07584 NC_017044.1 26245 26319 D tRNA-Glu 26245..26319 Rickettsia parkeri str. Portsmouth 11995588 MC1_t07586 tRNA MC1_t07586 NC_017044.1 106925 106999 D tRNA-Thr 106925..106999 Rickettsia parkeri str. Portsmouth 11995683 MC1_t07588 tRNA MC1_t07588 NC_017044.1 133088 133164 D tRNA-Met 133088..133164 Rickettsia parkeri str. Portsmouth 11995706 MC1_t07590 tRNA MC1_t07590 NC_017044.1 177905 177980 D tRNA-Trp 177905..177980 Rickettsia parkeri str. Portsmouth 11995744 MC1_t07592 tRNA MC1_t07592 NC_017044.1 213150 213225 R tRNA-Thr complement(213150..213225) Rickettsia parkeri str. Portsmouth 11995774 MC1_t07594 tRNA MC1_t07594 NC_017044.1 324579 324655 D tRNA-Met 324579..324655 Rickettsia parkeri str. Portsmouth 11995028 MC1_t07596 tRNA MC1_t07596 NC_017044.1 372789 372863 D tRNA-Asn 372789..372863 Rickettsia parkeri str. Portsmouth 11995079 MC1_t07598 tRNA MC1_t07598 NC_017044.1 488238 488312 D tRNA-Cys 488238..488312 Rickettsia parkeri str. Portsmouth 11995204 MC1_t07600 tRNA MC1_t07600 NC_017044.1 519718 519793 D tRNA-Lys 519718..519793 Rickettsia parkeri str. Portsmouth 11995242 MC1_t07602 tRNA MC1_t07602 NC_017044.1 519808 519884 D tRNA-Ile 519808..519884 Rickettsia parkeri str. Portsmouth 11995243 MC1_t07604 tRNA MC1_t07604 NC_017044.1 623405 623481 R tRNA-Asp complement(623405..623481) Rickettsia parkeri str. Portsmouth 11995351 MC1_t07606 tRNA MC1_t07606 NC_017044.1 690040 690116 R tRNA-Val complement(690040..690116) Rickettsia parkeri str. Portsmouth 11995411 MC1_t07608 tRNA MC1_t07608 NC_017044.1 694285 694360 D tRNA-Ala 694285..694360 Rickettsia parkeri str. Portsmouth 11995416 MC1_t07610 tRNA MC1_t07610 NC_017044.1 741947 742021 D tRNA-Gln 741947..742021 Rickettsia parkeri str. Portsmouth 11995456 MC1_t07612 tRNA MC1_t07612 NC_017044.1 742116 742192 R tRNA-Arg complement(742116..742192) Rickettsia parkeri str. Portsmouth 11995457 MC1_t07614 tRNA MC1_t07614 NC_017044.1 756427 756516 D tRNA-Ser 756427..756516 Rickettsia parkeri str. Portsmouth 11995474 MC1_t07616 tRNA MC1_t07616 NC_017044.1 776618 776705 D tRNA-Ser 776618..776705 Rickettsia parkeri str. Portsmouth 11995501 MC1_t07618 tRNA MC1_t07618 NC_017044.1 816167 816243 D tRNA-Arg 816167..816243 Rickettsia parkeri str. Portsmouth 11995546 MC1_t07620 tRNA MC1_t07620 NC_017044.1 856919 856993 R tRNA-Ala complement(856919..856993) Rickettsia parkeri str. Portsmouth 11994448 MC1_t07622 tRNA MC1_t07622 NC_017044.1 868891 868977 D tRNA-Leu 868891..868977 Rickettsia parkeri str. Portsmouth 11994459 MC1_t07624 tRNA MC1_t07624 NC_017044.1 873671 873745 D tRNA-Gly 873671..873745 Rickettsia parkeri str. Portsmouth 11994465 MC1_t07626 tRNA MC1_t07626 NC_017044.1 955982 956057 R tRNA-Val complement(955982..956057) Rickettsia parkeri str. Portsmouth 11994555 MC1_t07628 tRNA MC1_t07628 NC_017044.1 971445 971518 R tRNA-Gly complement(971445..971518) Rickettsia parkeri str. Portsmouth 11994586 MC1_t07630 tRNA MC1_t07630 NC_017044.1 971654 971739 R tRNA-Tyr complement(971654..971739) Rickettsia parkeri str. Portsmouth 11994587 MC1_t07632 tRNA MC1_t07632 NC_017044.1 983016 983101 D tRNA-Leu 983016..983101 Rickettsia parkeri str. Portsmouth 11994601 MC1_t07634 tRNA MC1_t07634 NC_017044.1 1027007 1027083 D tRNA-His 1027007..1027083 Rickettsia parkeri str. Portsmouth 11994645 MC1_t07636 tRNA MC1_t07636 NC_017044.1 1074831 1074922 D tRNA-Ser 1074831..1074922 Rickettsia parkeri str. Portsmouth 11994690 MC1_t07638 tRNA MC1_t07638 NC_017044.1 1130887 1130963 R tRNA-Met complement(1130887..1130963) Rickettsia parkeri str. Portsmouth 11994754 MC1_t07640 tRNA MC1_t07640 NC_017044.1 1202149 1202225 D tRNA-Pro 1202149..1202225 Rickettsia parkeri str. Portsmouth 11994816 MC1_t07642 tRNA MC1_t07642 NC_017044.1 1238980 1239056 R tRNA-Arg complement(1238980..1239056) Rickettsia parkeri str. Portsmouth 11994853 MC1_t07644 tRNA MC1_t07644 NC_017044.1 1284958 1285042 R tRNA-Leu complement(1284958..1285042) Rickettsia parkeri str. Portsmouth 11994906 MC1_t07646 tRNA MC1_t07646 NC_017044.1 1292102 1292176 R tRNA-Thr complement(1292102..1292176) Rickettsia parkeri str. Portsmouth 11994916 MC1_r07652 rRNA MC1_r07652 NC_017044.1 286277 289046 D 23S ribosomal RNA 286277..289046 Rickettsia parkeri str. Portsmouth 11994994 MC1_r07648 rRNA MC1_r07648 NC_017044.1 289311 289425 D 5S ribosomal RNA 289311..289425 Rickettsia parkeri str. Portsmouth 11994995 MC1_r07650 rRNA MC1_r07650 NC_017044.1 918882 920390 R 16S ribosomal RNA complement(918882..920390) Rickettsia parkeri str. Portsmouth 11994515