; retrieve-seq -v -org Rickettsia_rickettsii_Brazil_uid88069 -all -type downstream -feattype CDS -from 0 -to -2 -format wc -nocomment -label id,ctg,reg_left,reg_right,orf_strand -o /software/CC/bio/opt/rsat/rsa-tools//public_html/data/genomes/Rickettsia_rickettsii_Brazil_uid88069/genome/Rickettsia_rickettsii_Brazil_uid88069_stop_codons.wc
; organism      	Rickettsia_rickettsii_Brazil_uid88069
; sequence type 	downstream
; feature type  	cds
; Output format 	wc
; Line width    	60
; relative coordinates
;        from    -2
;        to      0
;        size    3
; Queries       	1332
;
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YP_005292300.1|NC_016913.1|234847|234849|R	\TGA\
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YP_005292305.1|NC_016913.1|239094|239096|D	\TAA\
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YP_005292307.1|NC_016913.1|240121|240123|D	\TAA\
YP_005292308.1|NC_016913.1|240943|240945|D	\TAG\
YP_005292309.1|NC_016913.1|241246|241248|D	\TAA\
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YP_005293242.1|NC_016913.1|1113067|1113069|D	\TAA\
YP_005293243.1|NC_016913.1|1113685|1113687|D	\TAA\
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YP_005293248.1|NC_016913.1|1119636|1119638|D	\TAA\
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YP_005293258.1|NC_016913.1|1129930|1129932|D	\TAA\
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YP_005293260.1|NC_016913.1|1131680|1131682|D	\TGA\
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YP_005293262.1|NC_016913.1|1132809|1132811|D	\TAA\
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YP_005293264.1|NC_016913.1|1134014|1134016|R	\TAA\
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YP_005293267.1|NC_016913.1|1137713|1137715|D	\TAA\
YP_005293268.1|NC_016913.1|1138087|1138089|D	\TAA\
YP_005293269.1|NC_016913.1|1138820|1138822|D	\TAG\
YP_005293270.1|NC_016913.1|1139240|1139242|D	\TAA\
YP_005293271.1|NC_016913.1|1139732|1139734|D	\TAA\
YP_005293272.1|NC_016913.1|1140226|1140228|D	\TAG\
YP_005293273.1|NC_016913.1|1140568|1140570|R	\TAG\
YP_005293274.1|NC_016913.1|1140891|1140893|R	\TAG\
YP_005293275.1|NC_016913.1|1141091|1141093|R	\TAG\
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YP_005293278.1|NC_016913.1|1143149|1143151|R	\TAA\
YP_005293279.1|NC_016913.1|1149536|1149538|D	\TAA\
YP_005293280.1|NC_016913.1|1150285|1150287|D	\TAG\
YP_005293281.1|NC_016913.1|1150594|1150596|D	\TAA\
YP_005293282.1|NC_016913.1|1152394|1152396|D	\TGA\
YP_005293283.1|NC_016913.1|1153344|1153346|D	\TAA\
YP_005293284.1|NC_016913.1|1153859|1153861|D	\TAA\
YP_005293285.1|NC_016913.1|1153869|1153871|R	\TAG\
YP_005293286.1|NC_016913.1|1154110|1154112|R	\TGA\
YP_005293287.1|NC_016913.1|1155051|1155053|R	\TAA\
YP_005293288.1|NC_016913.1|1156835|1156837|D	\TAA\
YP_005293289.1|NC_016913.1|1157155|1157157|D	\TAA\
YP_005293290.1|NC_016913.1|1157360|1157362|D	\TAA\
YP_005293291.1|NC_016913.1|1158664|1158666|R	\TAA\
YP_005293292.1|NC_016913.1|1158873|1158875|R	\TAG\
YP_005293293.1|NC_016913.1|1159434|1159436|R	\TGA\
YP_005293294.1|NC_016913.1|1160980|1160982|D	\TAG\
YP_005293295.1|NC_016913.1|1161613|1161615|D	\TAG\
YP_005293296.1|NC_016913.1|1162414|1162416|D	\TAA\
YP_005293297.1|NC_016913.1|1162780|1162782|D	\TGA\
YP_005293298.1|NC_016913.1|1162826|1162828|R	\TAA\
YP_005293299.1|NC_016913.1|1165924|1165926|R	\TGA\
YP_005293300.1|NC_016913.1|1166701|1166703|R	\TAA\
YP_005293301.1|NC_016913.1|1167460|1167462|R	\TAA\
YP_005293302.1|NC_016913.1|1168037|1168039|R	\TAA\
YP_005293303.1|NC_016913.1|1170292|1170294|D	\TAA\
YP_005293304.1|NC_016913.1|1171289|1171291|D	\TAA\
YP_005293305.1|NC_016913.1|1171738|1171740|D	\TAG\
YP_005293306.1|NC_016913.1|1172973|1172975|R	\TGA\
YP_005293307.1|NC_016913.1|1173796|1173798|R	\TAA\
YP_005293308.1|NC_016913.1|1175660|1175662|D	\TAA\
YP_005293309.1|NC_016913.1|1175854|1175856|R	\TGA\
YP_005293310.1|NC_016913.1|1176609|1176611|R	\TAG\
YP_005293311.1|NC_016913.1|1179369|1179371|D	\TAA\
YP_005293312.1|NC_016913.1|1179760|1179762|D	\TAA\
YP_005293313.1|NC_016913.1|1180112|1180114|D	\TAG\
YP_005293314.1|NC_016913.1|1181348|1181350|D	\TGA\
YP_005293315.1|NC_016913.1|1181974|1181976|D	\TGA\
YP_005293316.1|NC_016913.1|1182486|1182488|D	\TAA\
YP_005293317.1|NC_016913.1|1182499|1182501|R	\TAA\
YP_005293318.1|NC_016913.1|1182605|1182607|R	\TGA\
YP_005293319.1|NC_016913.1|1183323|1183325|R	\TAA\
YP_005293320.1|NC_016913.1|1183734|1183736|D	\TGA\
YP_005293321.1|NC_016913.1|1183883|1183885|D	\TAA\
YP_005293322.1|NC_016913.1|1184028|1184030|D	\TAG\
YP_005293323.1|NC_016913.1|1185200|1185202|D	\TAA\
YP_005293324.1|NC_016913.1|1185440|1185442|D	\TAA\
YP_005293325.1|NC_016913.1|1186194|1186196|D	\TAA\
YP_005293326.1|NC_016913.1|1187343|1187345|D	\TGA\
YP_005293327.1|NC_016913.1|1187511|1187513|D	\TAA\
YP_005293328.1|NC_016913.1|1188007|1188009|D	\TAA\
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YP_005293330.1|NC_016913.1|1189233|1189235|R	\TAA\
YP_005293331.1|NC_016913.1|1189468|1189470|R	\TAA\
YP_005293332.1|NC_016913.1|1189825|1189827|R	\TAA\
YP_005293333.1|NC_016913.1|1191249|1191251|D	\TAG\
YP_005293334.1|NC_016913.1|1191975|1191977|D	\TGA\
YP_005293335.1|NC_016913.1|1192419|1192421|D	\TAG\
YP_005293336.1|NC_016913.1|1192697|1192699|D	\TAA\
YP_005293337.1|NC_016913.1|1192776|1192778|D	\TGA\
YP_005293338.1|NC_016913.1|1192894|1192896|R	\TAG\
YP_005293339.1|NC_016913.1|1193317|1193319|D	\TAA\
YP_005293340.1|NC_016913.1|1193560|1193562|D	\TAA\
YP_005293341.1|NC_016913.1|1194316|1194318|D	\TAA\
YP_005293342.1|NC_016913.1|1195196|1195198|R	\TAA\
YP_005293343.1|NC_016913.1|1195539|1195541|R	\TAA\
YP_005293344.1|NC_016913.1|1197290|1197292|R	\TAA\
YP_005293345.1|NC_016913.1|1199126|1199128|D	\TGA\
YP_005293346.1|NC_016913.1|1199521|1199523|D	\TAA\
YP_005293347.1|NC_016913.1|1199681|1199683|R	\TAA\
YP_005293348.1|NC_016913.1|1201042|1201044|D	\TAA\
YP_005293349.1|NC_016913.1|1202834|1202836|D	\TAA\
YP_005293350.1|NC_016913.1|1204783|1204785|D	\TGA\
YP_005293351.1|NC_016913.1|1205616|1205618|D	\TAA\
YP_005293352.1|NC_016913.1|1205818|1205820|R	\TAG\
YP_005293353.1|NC_016913.1|1210218|1210220|D	\TAA\
YP_005293354.1|NC_016913.1|1210928|1210930|D	\TAA\
YP_005293355.1|NC_016913.1|1211888|1211890|D	\TAG\
YP_005293356.1|NC_016913.1|1213999|1214001|D	\TAA\
YP_005293357.1|NC_016913.1|1214331|1214333|D	\TGA\
YP_005293358.1|NC_016913.1|1214711|1214713|D	\TAA\
YP_005293359.1|NC_016913.1|1215632|1215634|D	\TGA\
YP_005293360.1|NC_016913.1|1217623|1217625|D	\TGA\
YP_005293361.1|NC_016913.1|1218555|1218557|D	\TAA\
YP_005293362.1|NC_016913.1|1218526|1218528|R	\TAA\
YP_005293363.1|NC_016913.1|1220109|1220111|R	\TAA\
YP_005293364.1|NC_016913.1|1220445|1220447|R	\TAA\
YP_005293365.1|NC_016913.1|1220942|1220944|R	\TAA\
YP_005293366.1|NC_016913.1|1222683|1222685|D	\TAA\
YP_005293367.1|NC_016913.1|1223195|1223197|D	\TAA\
YP_005293368.1|NC_016913.1|1224633|1224635|D	\TAA\
YP_005293369.1|NC_016913.1|1225734|1225736|D	\TAA\
YP_005293370.1|NC_016913.1|1225840|1225842|R	\TAA\
YP_005293371.1|NC_016913.1|1227585|1227587|R	\TAG\
YP_005293372.1|NC_016913.1|1228007|1228009|R	\TAG\
YP_005293373.1|NC_016913.1|1228663|1228665|R	\TGA\
YP_005293374.1|NC_016913.1|1230084|1230086|R	\TAA\
YP_005293375.1|NC_016913.1|1232093|1232095|R	\TAA\
YP_005293376.1|NC_016913.1|1233258|1233260|D	\TAA\
YP_005293377.1|NC_016913.1|1233583|1233585|D	\TAG\
YP_005293378.1|NC_016913.1|1233753|1233755|R	\TAA\
YP_005293379.1|NC_016913.1|1234087|1234089|R	\TAG\
YP_005293380.1|NC_016913.1|1234929|1234931|R	\TAA\
YP_005293381.1|NC_016913.1|1238351|1238353|D	\TGA\
YP_005293382.1|NC_016913.1|1238804|1238806|D	\TAA\
YP_005293383.1|NC_016913.1|1239229|1239231|D	\TAA\
YP_005293384.1|NC_016913.1|1239742|1239744|D	\TGA\
YP_005293385.1|NC_016913.1|1240543|1240545|R	\TAG\
YP_005293386.1|NC_016913.1|1241580|1241582|R	\TAA\
YP_005293387.1|NC_016913.1|1241980|1241982|R	\TGA\
YP_005293388.1|NC_016913.1|1243564|1243566|D	\TAA\
YP_005293389.1|NC_016913.1|1244051|1244053|D	\TAA\
YP_005293390.1|NC_016913.1|1244758|1244760|D	\TAA\
YP_005293391.1|NC_016913.1|1245113|1245115|D	\TGA\
YP_005293392.1|NC_016913.1|1246022|1246024|D	\TAA\
YP_005293393.1|NC_016913.1|1247005|1247007|D	\TAA\
YP_005293394.1|NC_016913.1|1247489|1247491|R	\TAA\
YP_005293395.1|NC_016913.1|1247809|1247811|R	\TGA\
YP_005293396.1|NC_016913.1|1248779|1248781|R	\TAG\
YP_005293397.1|NC_016913.1|1249152|1249154|R	\TAG\
YP_005293398.1|NC_016913.1|1249714|1249716|R	\TAA\
YP_005293399.1|NC_016913.1|1251521|1251523|D	\TAA\
YP_005293400.1|NC_016913.1|1253923|1253925|D	\TAG\
YP_005293401.1|NC_016913.1|1254460|1254462|R	\TAG\

; Host name	nic42
; Job started	2012-05-05.041413
; Job done	2012-05-05.041413
; Seconds	0.3
;	user	0.3
;	system	0.12
;	cuser	0
;	csystem	0