-- dump date 20120504_160935 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_444159.1 83815237 3851038 2..1576 1 NC_007677.1 identified by match to protein family HMM PF00308; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 1576 dnaA 3851038 dnaA Salinibacter ruber DSM 13855 chromosomal replication initiator protein DnaA YP_444159.1 2 D 309807 CDS YP_444160.1 83814447 3852188 1709..2842 1 NC_007677.1 identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 2842 dnaN 3852188 dnaN Salinibacter ruber DSM 13855 DNA polymerase III subunit beta YP_444160.1 1709 D 309807 CDS YP_444161.1 83816215 3851828 complement(2936..3931) 1 NC_007677.1 identified by match to protein family HMM PF07719; hypothetical protein 3931 3851828 SRU_0003 Salinibacter ruber DSM 13855 hypothetical protein YP_444161.1 2936 R 309807 CDS YP_444162.1 83815766 3852149 complement(4174..4809) 1 NC_007677.1 identified by similarity to GB:AAM71887.1; RNA polymerase sigma-70 factor 4809 3852149 SRU_0004 Salinibacter ruber DSM 13855 RNA polymerase sigma-70 factor YP_444162.1 4174 R 309807 CDS YP_444163.1 83814655 3851429 5074..6048 1 NC_007677.1 SCO1/SenC family protein 6048 3851429 SRU_0005 Salinibacter ruber DSM 13855 SCO1/SenC family protein YP_444163.1 5074 D 309807 CDS YP_444164.1 83814221 3850466 complement(6116..7009) 1 NC_007677.1 identified by match to protein family HMM PF00106; retinol dehydrogenase 11 7009 3850466 SRU_0006 Salinibacter ruber DSM 13855 retinol dehydrogenase 11 YP_444164.1 6116 R 309807 CDS YP_444165.1 83815955 3850453 complement(7159..7893) 1 NC_007677.1 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 7893 rpe 3850453 rpe Salinibacter ruber DSM 13855 ribulose-phosphate 3-epimerase YP_444165.1 7159 R 309807 CDS YP_444166.1 83815163 3850397 8062..8403 1 NC_007677.1 identified by match to protein family HMM PF02583; hypothetical protein 8403 3850397 SRU_0008 Salinibacter ruber DSM 13855 hypothetical protein YP_444166.1 8062 D 309807 CDS YP_444167.1 83814509 3852446 8568..9080 1 NC_007677.1 hypothetical protein 9080 3852446 SRU_0009 Salinibacter ruber DSM 13855 hypothetical protein YP_444167.1 8568 D 309807 CDS YP_444168.1 83816549 3851893 complement(9129..10181) 1 NC_007677.1 hypothetical protein 10181 3851893 SRU_0010 Salinibacter ruber DSM 13855 hypothetical protein YP_444168.1 9129 R 309807 CDS YP_444169.1 83815060 3851289 10739..11074 1 NC_007677.1 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 11074 yajC 3851289 yajC Salinibacter ruber DSM 13855 preprotein translocase subunit YajC YP_444169.1 10739 D 309807 CDS YP_444170.1 83814252 3852481 11129..12376 1 NC_007677.1 identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 12376 ribBA 3852481 ribBA Salinibacter ruber DSM 13855 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_444170.1 11129 D 309807 CDS YP_444171.1 83814077 3850399 12429..12593 1 NC_007677.1 hypothetical protein 12593 3850399 SRU_0013 Salinibacter ruber DSM 13855 hypothetical protein YP_444171.1 12429 D 309807 CDS YP_444172.1 83816444 3852811 complement(13259..15703) 1 NC_007677.1 identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 15703 3852811 SRU_0014 Salinibacter ruber DSM 13855 DNA internalization-related competence protein ComEC/Rec2 YP_444172.1 13259 R 309807 CDS YP_444173.1 83816060 3853170 15916..16398 1 NC_007677.1 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 16398 nusB 3853170 nusB Salinibacter ruber DSM 13855 transcription antitermination factor NusB YP_444173.1 15916 D 309807 CDS YP_444174.1 83814866 3851406 16451..17113 1 NC_007677.1 identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 17113 3851406 SRU_0016 Salinibacter ruber DSM 13855 serine/threonine protein phosphatase YP_444174.1 16451 D 309807 CDS YP_444175.1 83815143 3852950 17091..18293 1 NC_007677.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 18293 ychF 3852950 ychF Salinibacter ruber DSM 13855 GTP-dependent nucleic acid-binding protein EngD YP_444175.1 17091 D 309807 CDS YP_444176.1 83814512 3852449 18623..19558 1 NC_007677.1 hypothetical protein 19558 3852449 SRU_0018 Salinibacter ruber DSM 13855 hypothetical protein YP_444176.1 18623 D 309807 CDS YP_444177.1 83815798 3852181 19634..20893 1 NC_007677.1 identified by match to protein family HMM PF02687; hypothetical protein 20893 3852181 SRU_0019 Salinibacter ruber DSM 13855 hypothetical protein YP_444177.1 19634 D 309807 CDS YP_444178.1 83816431 3852798 21007..21828 1 NC_007677.1 identified by match to protein family HMM PF02679; phosphosulfolactate synthase 21828 3852798 SRU_0020 Salinibacter ruber DSM 13855 phosphosulfolactate synthase YP_444178.1 21007 D 309807 CDS YP_444179.1 83814500 3851722 22022..22258 1 NC_007677.1 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 22258 rpmB 3851722 rpmB Salinibacter ruber DSM 13855 50S ribosomal protein L28 YP_444179.1 22022 D 309807 CDS YP_444180.1 83815176 3850371 22333..22497 1 NC_007677.1 identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 22497 rpmG 3850371 rpmG Salinibacter ruber DSM 13855 50S ribosomal protein L33 YP_444180.1 22333 D 309807 CDS YP_444181.1 83816143 3850545 22501..22650 1 NC_007677.1 hypothetical protein 22650 3850545 SRU_0023 Salinibacter ruber DSM 13855 hypothetical protein YP_444181.1 22501 D 309807 CDS YP_444182.1 83815576 3850757 complement(23412..25964) 1 NC_007677.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR01443; replicative DNA helicase, intein-containing 25964 3850757 SRU_0026 Salinibacter ruber DSM 13855 replicative DNA helicase, intein-containing YP_444182.1 23412 R 309807 CDS YP_444183.1 83816180 3851559 complement(26151..27014) 1 NC_007677.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase 27014 3851559 SRU_0027 Salinibacter ruber DSM 13855 uracil-DNA glycosylase YP_444183.1 26151 R 309807 CDS YP_444184.1 83814400 3851173 complement(27039..28280) 1 NC_007677.1 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 28280 coaBC 3851173 coaBC Salinibacter ruber DSM 13855 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_444184.1 27039 R 309807 CDS YP_444185.1 83815006 3853045 complement(28463..28828) 1 NC_007677.1 hypothetical protein 28828 3853045 SRU_0029 Salinibacter ruber DSM 13855 hypothetical protein YP_444185.1 28463 R 309807 CDS YP_444186.1 83815961 3852697 complement(28890..29456) 1 NC_007677.1 identified by match to protein family HMM PF00625; guanylate kinase 29456 3852697 SRU_0030 Salinibacter ruber DSM 13855 guanylate kinase YP_444186.1 28890 R 309807 CDS YP_444187.1 83815150 3850384 complement(29546..30430) 1 NC_007677.1 identified by similarity to GB:AAR35615.1; match to protein family HMM PF03755; match to protein family HMM TIGR00255; hypothetical protein 30430 3850384 SRU_0031 Salinibacter ruber DSM 13855 hypothetical protein YP_444187.1 29546 R 309807 CDS YP_444188.1 83816107 3850587 complement(30705..31274) 1 NC_007677.1 identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 31274 frr 3850587 frr Salinibacter ruber DSM 13855 ribosome recycling factor YP_444188.1 30705 R 309807 CDS YP_444189.1 83816709 3850826 complement(31323..32102) 1 NC_007677.1 identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase 32102 pyrH 3850826 pyrH Salinibacter ruber DSM 13855 uridylate kinase YP_444189.1 31323 R 309807 CDS YP_444190.1 83815038 3852627 complement(32287..33117) 1 NC_007677.1 identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts 33117 tsf 3852627 tsf Salinibacter ruber DSM 13855 translation elongation factor Ts YP_444190.1 32287 R 309807 CDS YP_444191.1 83815455 3850752 complement(33185..34279) 1 NC_007677.1 identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 34279 rpsB 3850752 rpsB Salinibacter ruber DSM 13855 30S ribosomal protein S2 YP_444191.1 33185 R 309807 CDS YP_444192.1 83816332 3851959 complement(34420..34818) 1 NC_007677.1 identified by match to protein family HMM PF00380; 30S ribosomal protein S9 34818 rpsI 3851959 rpsI Salinibacter ruber DSM 13855 30S ribosomal protein S9 YP_444192.1 34420 R 309807 CDS YP_444193.1 83814640 3851453 complement(34873..35343) 1 NC_007677.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 35343 rplM 3851453 rplM Salinibacter ruber DSM 13855 50S ribosomal protein L13 YP_444193.1 34873 R 309807 CDS YP_444194.1 83815425 3852274 35672..36193 1 NC_007677.1 identified by match to protein family HMM PF02620; hypothetical protein 36193 3852274 SRU_0039 Salinibacter ruber DSM 13855 hypothetical protein YP_444194.1 35672 D 309807 CDS YP_444195.1 83815909 3851599 36363..36560 1 NC_007677.1 identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 36560 rpmF 3851599 rpmF Salinibacter ruber DSM 13855 50S ribosomal protein L32 YP_444195.1 36363 D 309807 CDS YP_444196.1 83814266 3852495 36837..37853 1 NC_007677.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 37853 plsX 3852495 plsX Salinibacter ruber DSM 13855 glycerol-3-phosphate acyltransferase PlsX YP_444196.1 36837 D 309807 CDS YP_444197.1 83814585 3851065 37897..38901 1 NC_007677.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 38901 fabH 3851065 fabH Salinibacter ruber DSM 13855 3-oxoacyl-ACP synthase YP_444197.1 37897 D 309807 CDS YP_444198.1 83816635 3852089 38904..39926 1 NC_007677.1 identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 39926 fabD 3852089 fabD Salinibacter ruber DSM 13855 malonyl CoA-acyl carrier protein transacylase YP_444198.1 38904 D 309807 CDS YP_444199.1 83815821 3851627 39988..40833 1 NC_007677.1 hypothetical protein 40833 3851627 SRU_0044 Salinibacter ruber DSM 13855 hypothetical protein YP_444199.1 39988 D 309807 CDS YP_444200.1 83814928 3850980 41017..41766 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase 41766 fabG 3850980 fabG Salinibacter ruber DSM 13855 3-oxoacyl-(acyl-carrier-protein) reductase YP_444200.1 41017 D 309807 CDS YP_444201.1 83816639 3852093 41983..43419 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 43419 3852093 SRU_0046 Salinibacter ruber DSM 13855 ATP-dependent RNA helicase YP_444201.1 41983 D 309807 CDS YP_444202.1 83816345 3851972 complement(44458..45588) 1 NC_007677.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 45588 3851972 SRU_0047 Salinibacter ruber DSM 13855 DoxX subfamily protein YP_444202.1 44458 R 309807 CDS YP_444203.1 83814678 3852263 complement(45691..45942) 1 NC_007677.1 hypothetical protein 45942 3852263 SRU_0048 Salinibacter ruber DSM 13855 hypothetical protein YP_444203.1 45691 R 309807 CDS YP_444204.1 83816340 3851967 46066..47298 1 NC_007677.1 identified by match to protein family HMM PF02073; aminopeptidase 47298 3851967 SRU_0049 Salinibacter ruber DSM 13855 aminopeptidase YP_444204.1 46066 D 309807 CDS YP_444205.1 83815928 3850426 47601..49058 1 NC_007677.1 identified by match to protein family HMM PF00801; PKD domain-containing protein 49058 3850426 SRU_0050 Salinibacter ruber DSM 13855 PKD domain-containing protein YP_444205.1 47601 D 309807 CDS YP_444206.1 83814408 3852992 49558..49782 1 NC_007677.1 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; hypothetical protein 49782 rpmH 3852992 rpmH Salinibacter ruber DSM 13855 hypothetical protein YP_444206.1 49558 D 309807 CDS YP_444207.1 83816626 3852080 49795..50235 1 NC_007677.1 hypothetical protein 50235 3852080 SRU_0054 Salinibacter ruber DSM 13855 hypothetical protein YP_444207.1 49795 D 309807 CDS YP_444208.1 83816022 3851674 50381..52378 1 NC_007677.1 identified by match to protein family HMM PF02096; inner membrane protein oxaA 52378 3851674 SRU_0055 Salinibacter ruber DSM 13855 inner membrane protein oxaA YP_444208.1 50381 D 309807 CDS YP_444209.1 83815382 3850894 52573..53958 1 NC_007677.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE 53958 trmE 3850894 trmE Salinibacter ruber DSM 13855 tRNA modification GTPase TrmE YP_444209.1 52573 D 309807 CDS YP_444210.1 83814393 3851166 54149..54895 1 NC_007677.1 identified by match to protein family HMM PF01643; acyl-ACP thioesterase 54895 3851166 SRU_0057 Salinibacter ruber DSM 13855 acyl-ACP thioesterase YP_444210.1 54149 D 309807 CDS YP_444211.1 83816262 3852925 55061..55792 1 NC_007677.1 hypothetical protein 55792 3852925 SRU_0058 Salinibacter ruber DSM 13855 hypothetical protein YP_444211.1 55061 D 309807 CDS YP_444212.1 83816673 3852674 56738..57217 1 NC_007677.1 hypothetical protein 57217 3852674 SRU_0059 Salinibacter ruber DSM 13855 hypothetical protein YP_444212.1 56738 D 309807 CDS YP_444213.1 83815019 3852431 57685..59679 1 NC_007677.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 59679 gidA 3852431 gidA Salinibacter ruber DSM 13855 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_444213.1 57685 D 309807 CDS YP_444214.1 83815319 3852148 59754..60401 1 NC_007677.1 glucose inhibited division protein B 60401 3852148 SRU_0061 Salinibacter ruber DSM 13855 glucose inhibited division protein B YP_444214.1 59754 D 309807 CDS YP_444215.1 83815935 3850433 60470..61330 1 NC_007677.1 hypothetical protein 61330 3850433 SRU_0062 Salinibacter ruber DSM 13855 hypothetical protein YP_444215.1 60470 D 309807 CDS YP_444216.1 83816849 3851160 complement(61566..64994) 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 64994 mfd 3851160 mfd Salinibacter ruber DSM 13855 transcription-repair coupling factor YP_444216.1 61566 R 309807 CDS YP_444217.1 83814652 3851426 65480..65836 1 NC_007677.1 biotin synthesis protein 65836 3851426 SRU_0064 Salinibacter ruber DSM 13855 biotin synthesis protein YP_444217.1 65480 D 309807 CDS YP_444218.1 83815682 3851019 complement(66646..67581) 1 NC_007677.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 67581 murQ 3851019 murQ Salinibacter ruber DSM 13855 N-acetylmuramic acid 6-phosphate etherase YP_444218.1 66646 R 309807 CDS YP_444219.1 83814071 3852475 complement(67641..70316) 1 NC_007677.1 identified by match to protein family HMM PF00515; hypothetical protein 70316 3852475 SRU_0066 Salinibacter ruber DSM 13855 hypothetical protein YP_444219.1 67641 R 309807 CDS YP_444220.1 83814830 3852396 71532..72770 1 NC_007677.1 identified by similarity to SP:P05651; match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF 72770 recF 3852396 recF Salinibacter ruber DSM 13855 DNA replication and repair protein RecF YP_444220.1 71532 D 309807 CDS YP_444221.1 83815610 3850791 72880..74355 1 NC_007677.1 identified by match to protein family HMM PF01435; M48 family peptidase 74355 3850791 SRU_0068 Salinibacter ruber DSM 13855 M48 family peptidase YP_444221.1 72880 D 309807 CDS YP_444222.1 83816826 3851136 complement(74455..74901) 1 NC_007677.1 identified by match to protein family HMM PF01575; phosphate acetyltransferase 74901 3851136 SRU_0069 Salinibacter ruber DSM 13855 phosphate acetyltransferase YP_444222.1 74455 R 309807 CDS YP_444223.1 83814430 3850716 75152..77701 1 NC_007677.1 hypothetical protein 77701 3850716 SRU_0070 Salinibacter ruber DSM 13855 hypothetical protein YP_444223.1 75152 D 309807 CDS YP_444224.1 83814492 3851714 complement(77736..79091) 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM TIGR02249; integrase/recombinase 79091 3851714 SRU_0071 Salinibacter ruber DSM 13855 integrase/recombinase YP_444224.1 77736 R 309807 CDS YP_444225.1 83816383 3851879 80198..80590 1 NC_007677.1 identified by match to protein family HMM PF01850; twitching mobility protein PilT 80590 3851879 SRU_0072 Salinibacter ruber DSM 13855 twitching mobility protein PilT YP_444225.1 80198 D 309807 CDS YP_444226.1 83816148 3850550 82004..82249 1 NC_007677.1 hypothetical protein 82249 3850550 SRU_0073 Salinibacter ruber DSM 13855 hypothetical protein YP_444226.1 82004 D 309807 CDS YP_444227.1 83815139 3852946 complement(82754..84880) 1 NC_007677.1 identified by match to protein family HMM TIGR02094; maltodextrin phosphorylase 84880 malP 3852946 malP Salinibacter ruber DSM 13855 maltodextrin phosphorylase YP_444227.1 82754 R 309807 CDS YP_444228.1 83815858 3852516 84966..87374 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 87374 3852516 SRU_0075 Salinibacter ruber DSM 13855 sensor histidine kinase YP_444228.1 84966 D 309807 CDS YP_444229.1 83815394 3850906 complement(87384..88247) 1 NC_007677.1 hypothetical protein 88247 3850906 SRU_0076 Salinibacter ruber DSM 13855 hypothetical protein YP_444229.1 87384 R 309807 CDS YP_444230.2 161986637 3851457 complement(88366..89799) 1 NC_007677.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 89799 3851457 SRU_0077 Salinibacter ruber DSM 13855 mercuric reductase YP_444230.2 88366 R 309807 CDS YP_444231.1 83814146 3850939 complement(89850..91364) 1 NC_007677.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 91364 zwf 3850939 zwf Salinibacter ruber DSM 13855 glucose-6-phosphate 1-dehydrogenase YP_444231.1 89850 R 309807 CDS YP_444232.2 161986629 3852865 complement(91440..92351) 1 NC_007677.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 92351 gnd 3852865 gnd Salinibacter ruber DSM 13855 6-phosphogluconate dehydrogenase YP_444232.2 91440 R 309807 CDS YP_444233.1 83815544 3852217 complement(92501..95263) 1 NC_007677.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 95263 tal 3852217 tal Salinibacter ruber DSM 13855 bifunctional transaldolase/phosoglucose isomerase YP_444233.1 92501 R 309807 CDS YP_444234.1 83814983 3851192 96341..96973 1 NC_007677.1 hypothetical protein 96973 3851192 SRU_0081 Salinibacter ruber DSM 13855 hypothetical protein YP_444234.1 96341 D 309807 CDS YP_444235.1 83814371 3851242 97174..97821 1 NC_007677.1 identified by match to protein family HMM PF00440; HTH-type transcriptional repressor Bm3R1 97821 3851242 SRU_0082 Salinibacter ruber DSM 13855 HTH-type transcriptional repressor Bm3R1 YP_444235.1 97174 D 309807 CDS YP_444236.1 83816237 3852900 98069..100429 1 NC_007677.1 identified by match to protein family HMM PF02321; cation efflux system protein 100429 3852900 SRU_0083 Salinibacter ruber DSM 13855 cation efflux system protein YP_444236.1 98069 D 309807 CDS YP_444237.1 83814905 3852354 100404..101579 1 NC_007677.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; transport/efflux transmembrane protein 101579 3852354 SRU_0084 Salinibacter ruber DSM 13855 transport/efflux transmembrane protein YP_444237.1 100404 D 309807 CDS YP_444238.1 83814891 3851313 101639..104689 1 NC_007677.1 identified by match to protein family HMM PF00873; match to protein family HMM PF01849; AcrB/AcrD/AcrF family transporter 104689 3851313 SRU_0085 Salinibacter ruber DSM 13855 AcrB/AcrD/AcrF family transporter YP_444238.1 101639 D 309807 CDS YP_444239.1 83814131 3851118 105156..107294 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF01336; match to protein family HMM PF02518; sensory box histidine kinase/response regulator 107294 3851118 SRU_0086 Salinibacter ruber DSM 13855 sensory box histidine kinase/response regulator YP_444239.1 105156 D 309807 CDS YP_444240.1 83816514 3851988 complement(107353..109308) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; adaptive-response sensory-kinase 109308 ark 3851988 ark Salinibacter ruber DSM 13855 adaptive-response sensory-kinase YP_444240.1 107353 R 309807 CDS YP_444241.1 83815223 3852304 complement(109551..112091) 1 NC_007677.1 identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase domain-containing protein 112091 3852304 SRU_0088 Salinibacter ruber DSM 13855 pyridine nucleotide-disulfide oxidoreductase domain-containing protein YP_444241.1 109551 R 309807 CDS YP_444242.1 83816801 3851229 complement(112163..113872) 1 NC_007677.1 identified by match to protein family HMM PF02518; membrane bound his kinase A 113872 3851229 SRU_0089 Salinibacter ruber DSM 13855 membrane bound his kinase A YP_444242.1 112163 R 309807 CDS YP_444243.1 83816070 3853180 complement(113972..115429) 1 NC_007677.1 hypothetical protein 115429 3853180 SRU_0090 Salinibacter ruber DSM 13855 hypothetical protein YP_444243.1 113972 R 309807 CDS YP_444244.1 83815650 3850987 115517..116584 1 NC_007677.1 hypothetical protein 116584 3850987 SRU_0091 Salinibacter ruber DSM 13855 hypothetical protein YP_444244.1 115517 D 309807 CDS YP_444245.1 83816233 3852896 116581..117471 1 NC_007677.1 hypothetical protein 117471 3852896 SRU_0092 Salinibacter ruber DSM 13855 hypothetical protein YP_444245.1 116581 D 309807 CDS YP_444246.1 83814357 3851345 117625..120498 1 NC_007677.1 identified by match to protein family HMM PF00311; phosphoenolpyruvate carboxylase 120498 ppc 3851345 ppc Salinibacter ruber DSM 13855 phosphoenolpyruvate carboxylase YP_444246.1 117625 D 309807 CDS YP_444247.1 83814232 3852580 120498..121160 1 NC_007677.1 hypothetical protein 121160 3852580 SRU_0094 Salinibacter ruber DSM 13855 hypothetical protein YP_444247.1 120498 D 309807 CDS YP_444248.1 83815062 3851291 complement(121196..124399) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; utilizing regulatory protein tutC 124399 3851291 SRU_0095 Salinibacter ruber DSM 13855 utilizing regulatory protein tutC YP_444248.1 121196 R 309807 CDS YP_444249.1 83816843 3851154 125039..127927 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 127927 3851154 SRU_0096 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_444249.1 125039 D 309807 CDS YP_444250.1 83814670 3852255 127950..129395 1 NC_007677.1 hypothetical protein 129395 3852255 SRU_0097 Salinibacter ruber DSM 13855 hypothetical protein YP_444250.1 127950 D 309807 CDS YP_444251.1 83815813 3851619 129371..130924 1 NC_007677.1 hypothetical protein 130924 3851619 SRU_0098 Salinibacter ruber DSM 13855 hypothetical protein YP_444251.1 129371 D 309807 CDS YP_444252.1 83816358 3851854 131485..132615 1 NC_007677.1 identified by match to protein family HMM PF03150; methylamine utilization protein 132615 mauG 3851854 mauG Salinibacter ruber DSM 13855 methylamine utilization protein YP_444252.1 131485 D 309807 CDS YP_444253.1 83814626 3851439 132844..133863 1 NC_007677.1 hypothetical protein 133863 3851439 SRU_0100 Salinibacter ruber DSM 13855 hypothetical protein YP_444253.1 132844 D 309807 CDS YP_444254.1 83816505 3851979 134106..134714 1 NC_007677.1 identified by match to protein family HMM PF04011; hypothetical protein 134714 3851979 SRU_0101 Salinibacter ruber DSM 13855 hypothetical protein YP_444254.1 134106 D 309807 CDS YP_444255.1 83815861 3852519 134774..135604 1 NC_007677.1 identified by match to protein family HMM PF04536; hypothetical protein 135604 3852519 SRU_0102 Salinibacter ruber DSM 13855 hypothetical protein YP_444255.1 134774 D 309807 CDS YP_444256.1 83815416 3852991 135622..136074 1 NC_007677.1 identified by match to protein family HMM PF00515; hypothetical protein 136074 3852991 SRU_0103 Salinibacter ruber DSM 13855 hypothetical protein YP_444256.1 135622 D 309807 CDS YP_444257.1 83814808 3852413 136108..137163 1 NC_007677.1 identified by match to protein family HMM PF01476; LysM domain-containing protein 137163 3852413 SRU_0104 Salinibacter ruber DSM 13855 LysM domain-containing protein YP_444257.1 136108 D 309807 CDS YP_444258.1 83816698 3850815 137252..138040 1 NC_007677.1 identified by match to protein family HMM PF02517; CAAX amino protease 138040 3850815 SRU_0105 Salinibacter ruber DSM 13855 CAAX amino protease YP_444258.1 137252 D 309807 CDS YP_444259.1 83816097 3850577 138226..139056 1 NC_007677.1 identified by match to protein family HMM PF01435; peptidase 139056 3850577 SRU_0106 Salinibacter ruber DSM 13855 peptidase YP_444259.1 138226 D 309807 CDS YP_444260.1 83815723 3850630 139238..139951 1 NC_007677.1 identified by match to protein family HMM PF02630; electron transport protein 139951 3850630 SRU_0107 Salinibacter ruber DSM 13855 electron transport protein YP_444260.1 139238 D 309807 CDS YP_444261.1 83815244 3853012 140188..140466 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 140466 3853012 SRU_0108 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_444261.1 140188 D 309807 CDS YP_444262.1 83814060 3852464 140430..140906 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 140906 3852464 SRU_0109 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_444262.1 140430 D 309807 CDS YP_444263.1 83815275 3851056 140882..141514 1 NC_007677.1 hypothetical protein 141514 3851056 SRU_0110 Salinibacter ruber DSM 13855 hypothetical protein YP_444263.1 140882 D 309807 CDS YP_444264.1 83815585 3850766 141539..144013 1 NC_007677.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium efflux ATPase 144013 3850766 SRU_0111 Salinibacter ruber DSM 13855 cadmium efflux ATPase YP_444264.1 141539 D 309807 CDS YP_444265.1 83816213 3851826 144049..144495 1 NC_007677.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 144495 3851826 SRU_0112 Salinibacter ruber DSM 13855 ArsR family transcriptional regulator YP_444265.1 144049 D 309807 CDS YP_444266.1 83814934 3851317 complement(144543..146162) 1 NC_007677.1 identified by match to protein family HMM PF02538; hydantoinase/oxoprolinase 146162 3851317 SRU_0113 Salinibacter ruber DSM 13855 hydantoinase/oxoprolinase YP_444266.1 144543 R 309807 CDS YP_444267.1 83814475 3851794 147041..149830 1 NC_007677.1 identified by match to protein family HMM TIGR01965; hypothetical protein 149830 3851794 SRU_0114 Salinibacter ruber DSM 13855 hypothetical protein YP_444267.1 147041 D 309807 CDS YP_444268.1 83815760 3852768 151047..151361 1 NC_007677.1 hypothetical protein 151361 3852768 SRU_0116 Salinibacter ruber DSM 13855 hypothetical protein YP_444268.1 151047 D 309807 CDS YP_444269.1 83816200 3851813 complement(151336..152778) 1 NC_007677.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase 152778 gcdH 3851813 gcdH Salinibacter ruber DSM 13855 glutaryl-CoA dehydrogenase YP_444269.1 151336 R 309807 CDS YP_444270.1 83814604 3851456 153193..155694 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for iron transport 155694 3851456 SRU_0117 Salinibacter ruber DSM 13855 outer membrane receptor for iron transport YP_444270.1 153193 D 309807 CDS YP_444271.1 83814178 3850855 156848..157498 1 NC_007677.1 hypothetical protein 157498 3850855 SRU_0118 Salinibacter ruber DSM 13855 hypothetical protein YP_444271.1 156848 D 309807 CDS YP_444272.1 83815899 3851589 complement(158144..158869) 1 NC_007677.1 hypothetical protein 158869 3851589 SRU_0119 Salinibacter ruber DSM 13855 hypothetical protein YP_444272.1 158144 R 309807 CDS YP_444273.1 83816378 3851874 159451..160278 1 NC_007677.1 hypothetical protein 160278 3851874 SRU_0120 Salinibacter ruber DSM 13855 hypothetical protein YP_444273.1 159451 D 309807 CDS YP_444274.1 83814152 3850945 160450..160923 1 NC_007677.1 identified by match to protein family HMM PF07053; hypothetical protein 160923 3850945 SRU_0121 Salinibacter ruber DSM 13855 hypothetical protein YP_444274.1 160450 D 309807 CDS YP_444275.1 83814667 3852252 162162..162377 1 NC_007677.1 hypothetical protein 162377 3852252 SRU_0122 Salinibacter ruber DSM 13855 hypothetical protein YP_444275.1 162162 D 309807 CDS YP_444276.1 83816090 3850570 162730..163479 1 NC_007677.1 hypothetical protein 163479 3850570 SRU_0123 Salinibacter ruber DSM 13855 hypothetical protein YP_444276.1 162730 D 309807 CDS YP_444277.1 83816695 3850812 163519..164286 1 NC_007677.1 hypothetical protein 164286 3850812 SRU_0124 Salinibacter ruber DSM 13855 hypothetical protein YP_444277.1 163519 D 309807 CDS YP_444278.1 83814464 3852205 complement(164512..164652) 1 NC_007677.1 hypothetical protein 164652 3852205 SRU_0125 Salinibacter ruber DSM 13855 hypothetical protein YP_444278.1 164512 R 309807 CDS YP_444279.1 83815114 3852645 complement(165130..166323) 1 NC_007677.1 hypothetical protein 166323 3852645 SRU_0126 Salinibacter ruber DSM 13855 hypothetical protein YP_444279.1 165130 R 309807 CDS YP_444280.1 83814867 3851407 167269..168831 1 NC_007677.1 identified by match to protein family HMM PF03055; 15,15' beta carotene dioxygenase 168831 3851407 SRU_0127 Salinibacter ruber DSM 13855 15,15' beta carotene dioxygenase YP_444280.1 167269 D 309807 CDS YP_444281.1 83815452 3850749 168859..169710 1 NC_007677.1 hypothetical protein 169710 3850749 SRU_0128 Salinibacter ruber DSM 13855 hypothetical protein YP_444281.1 168859 D 309807 CDS YP_444282.1 83816088 3850568 complement(170200..171483) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; light- and oxygen-sensing transcription regulator 171483 3850568 SRU_0129 Salinibacter ruber DSM 13855 light- and oxygen-sensing transcription regulator YP_444282.1 170200 R 309807 CDS YP_444283.1 83814239 3852587 complement(171722..172660) 1 NC_007677.1 identified by match to protein family HMM PF07446; GumN protein 172660 3852587 SRU_0130 Salinibacter ruber DSM 13855 GumN protein YP_444283.1 171722 R 309807 CDS YP_444284.1 83814991 3851200 173679..174653 1 NC_007677.1 identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta 174653 3851200 SRU_0131 Salinibacter ruber DSM 13855 ribonucleoside-diphosphate reductase subunit beta YP_444284.1 173679 D 309807 CDS YP_444285.1 83816554 3851898 174757..177555 1 NC_007677.1 identified by match to protein family HMM PF02867; match to protein family HMM TIGR02510; ribonucleoside-diphosphate reductase subunit alpha 177555 3851898 SRU_0132 Salinibacter ruber DSM 13855 ribonucleoside-diphosphate reductase subunit alpha YP_444285.1 174757 D 309807 CDS YP_444286.1 83816543 3851886 177606..178052 1 NC_007677.1 identified by match to protein family HMM PF03061; thioesterase family protein 178052 3851886 SRU_0133 Salinibacter ruber DSM 13855 thioesterase family protein YP_444286.1 177606 D 309807 CDS YP_444287.1 83814671 3852256 complement(178131..179294) 1 NC_007677.1 identified by match to protein family HMM PF07690; major facilitator superfamily transporter 179294 3852256 SRU_0134 Salinibacter ruber DSM 13855 major facilitator superfamily transporter YP_444287.1 178131 R 309807 CDS YP_444288.1 83815335 3852125 181254..182819 1 NC_007677.1 hypothetical protein 182819 3852125 SRU_0135 Salinibacter ruber DSM 13855 hypothetical protein YP_444288.1 181254 D 309807 CDS YP_444289.1 83815625 3850688 183046..183567 1 NC_007677.1 hypothetical protein 183567 3850688 SRU_0136 Salinibacter ruber DSM 13855 hypothetical protein YP_444289.1 183046 D 309807 CDS YP_444290.1 83815571 3852244 183669..184331 1 NC_007677.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970; phenol hydroxylase 184331 3852244 SRU_0137 Salinibacter ruber DSM 13855 phenol hydroxylase YP_444290.1 183669 D 309807 CDS YP_444291.1 83816209 3851822 184771..185436 1 NC_007677.1 identified by match to protein family HMM PF01022; transcriptional regulator 185436 3851822 SRU_0138 Salinibacter ruber DSM 13855 transcriptional regulator YP_444291.1 184771 D 309807 CDS YP_444292.1 83815202 3851783 186124..186594 1 NC_007677.1 hypothetical protein 186594 3851783 SRU_0139 Salinibacter ruber DSM 13855 hypothetical protein YP_444292.1 186124 D 309807 CDS YP_444293.1 83816481 3852850 188299..189342 1 NC_007677.1 hypothetical protein 189342 3852850 SRU_0140 Salinibacter ruber DSM 13855 hypothetical protein YP_444293.1 188299 D 309807 CDS YP_444294.1 83814134 3851121 complement(189441..190913) 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 190913 3851121 SRU_0141 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_444294.1 189441 R 309807 CDS YP_444295.1 83814894 3851316 complement(191423..192502) 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 192502 3851316 SRU_0142 Salinibacter ruber DSM 13855 universal stress protein YP_444295.1 191423 R 309807 CDS YP_444296.1 83815477 3853071 193235..195409 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; adaptive-response sensory-kinase 195409 ark 3853071 ark Salinibacter ruber DSM 13855 adaptive-response sensory-kinase YP_444296.1 193235 D 309807 CDS YP_444297.1 83816430 3852797 195674..200680 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; redox sensing protein 200680 3852797 SRU_0144 Salinibacter ruber DSM 13855 redox sensing protein YP_444297.1 195674 D 309807 CDS YP_444298.1 83814599 3851079 200982..201206 1 NC_007677.1 hypothetical protein 201206 3851079 SRU_0145 Salinibacter ruber DSM 13855 hypothetical protein YP_444298.1 200982 D 309807 CDS YP_444299.1 83814797 3850889 complement(201387..203006) 1 NC_007677.1 hypothetical protein 203006 3850889 SRU_0146 Salinibacter ruber DSM 13855 hypothetical protein YP_444299.1 201387 R 309807 CDS YP_444300.1 83815837 3851643 complement(203003..203953) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 203953 3851643 SRU_0147 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_444300.1 203003 R 309807 CDS YP_444301.1 83816754 3852561 complement(203950..204870) 1 NC_007677.1 identified by match to protein family HMM PF02517; CAAX amino protease 204870 3852561 SRU_0148 Salinibacter ruber DSM 13855 CAAX amino protease YP_444301.1 203950 R 309807 CDS YP_444302.1 83816386 3851882 205998..206402 1 NC_007677.1 hypothetical protein 206402 3851882 SRU_0149 Salinibacter ruber DSM 13855 hypothetical protein YP_444302.1 205998 D 309807 CDS YP_444303.1 83815362 3850658 complement(206432..207394) 1 NC_007677.1 identified by match to protein family HMM PF02574; vitamin B12-dependent methionine synthase family protein 207394 3850658 SRU_0150 Salinibacter ruber DSM 13855 vitamin B12-dependent methionine synthase family protein YP_444303.1 206432 R 309807 CDS YP_444304.1 83816295 3852057 complement(207806..208096) 1 NC_007677.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 208096 3852057 SRU_0151 Salinibacter ruber DSM 13855 Tat pathway signal sequence domain-containing protein YP_444304.1 207806 R 309807 CDS YP_444305.1 83814112 3850925 complement(208326..209954) 1 NC_007677.1 hypothetical protein 209954 3850925 SRU_0152 Salinibacter ruber DSM 13855 hypothetical protein YP_444305.1 208326 R 309807 CDS YP_444306.1 83815840 3851646 209985..210668 1 NC_007677.1 hypothetical protein 210668 3851646 SRU_0153 Salinibacter ruber DSM 13855 hypothetical protein YP_444306.1 209985 D 309807 CDS YP_444307.1 83815369 3850665 211340..212098 1 NC_007677.1 hypothetical protein 212098 3850665 SRU_0154 Salinibacter ruber DSM 13855 hypothetical protein YP_444307.1 211340 D 309807 CDS YP_444308.1 83815090 3850500 complement(213279..214376) 1 NC_007677.1 hypothetical protein 214376 3850500 SRU_0155 Salinibacter ruber DSM 13855 hypothetical protein YP_444308.1 213279 R 309807 CDS YP_444309.1 83814309 3851101 214728..215378 1 NC_007677.1 thiol:disulfide interchange protein tlpA 215378 3851101 SRU_0156 Salinibacter ruber DSM 13855 thiol:disulfide interchange protein tlpA YP_444309.1 214728 D 309807 CDS YP_444310.1 83815458 3853052 complement(215501..216139) 1 NC_007677.1 hypothetical protein 216139 3853052 SRU_0157 Salinibacter ruber DSM 13855 hypothetical protein YP_444310.1 215501 R 309807 CDS YP_444311.1 83815042 3852631 216651..218195 1 NC_007677.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis transducer 218195 3852631 SRU_0158 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis transducer YP_444311.1 216651 D 309807 CDS YP_444312.1 83814728 3851482 218182..220098 1 NC_007677.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 220098 3851482 SRU_0159 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_444312.1 218182 D 309807 CDS YP_444313.1 83814593 3851073 220588..220905 1 NC_007677.1 hypothetical protein 220905 3851073 SRU_0160 Salinibacter ruber DSM 13855 hypothetical protein YP_444313.1 220588 D 309807 CDS YP_444314.1 83816625 3852079 complement(220971..221585) 1 NC_007677.1 hypothetical protein 221585 3852079 SRU_0161 Salinibacter ruber DSM 13855 hypothetical protein YP_444314.1 220971 R 309807 CDS YP_444315.1 83815867 3852525 complement(221705..221914) 1 NC_007677.1 hypothetical protein 221914 3852525 SRU_0162 Salinibacter ruber DSM 13855 hypothetical protein YP_444315.1 221705 R 309807 CDS YP_444316.1 83815073 3852368 complement(222076..222462) 1 NC_007677.1 hypothetical protein 222462 3852368 SRU_0163 Salinibacter ruber DSM 13855 hypothetical protein YP_444316.1 222076 R 309807 CDS YP_444317.1 83814248 3852596 complement(223777..224385) 1 NC_007677.1 hypothetical protein 224385 3852596 SRU_0164 Salinibacter ruber DSM 13855 hypothetical protein YP_444317.1 223777 R 309807 CDS YP_444318.1 83816265 3852928 complement(224768..225250) 1 NC_007677.1 identified by match to protein family HMM PF00801; PKD domain-containing protein 225250 3852928 SRU_0165 Salinibacter ruber DSM 13855 PKD domain-containing protein YP_444318.1 224768 R 309807 CDS YP_444319.1 83815386 3850898 complement(225416..226501) 1 NC_007677.1 hypothetical protein 226501 3850898 SRU_0166 Salinibacter ruber DSM 13855 hypothetical protein YP_444319.1 225416 R 309807 CDS YP_444320.1 83814612 3851464 complement(226501..227508) 1 NC_007677.1 hypothetical protein 227508 3851464 SRU_0167 Salinibacter ruber DSM 13855 hypothetical protein YP_444320.1 226501 R 309807 CDS YP_444321.1 83816558 3851902 complement(227543..229813) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 229813 3851902 SRU_0168 Salinibacter ruber DSM 13855 hypothetical protein YP_444321.1 227543 R 309807 CDS YP_444322.1 83815797 3852180 complement(230312..231343) 1 NC_007677.1 hypothetical protein 231343 3852180 SRU_0169 Salinibacter ruber DSM 13855 hypothetical protein YP_444322.1 230312 R 309807 CDS YP_444323.1 83815587 3850768 231996..233948 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor histidine kinase 233948 3850768 SRU_0170 Salinibacter ruber DSM 13855 sensor histidine kinase YP_444323.1 231996 D 309807 CDS YP_444324.1 83814892 3851314 complement(233961..234611) 1 NC_007677.1 hypothetical protein 234611 3851314 SRU_0171 Salinibacter ruber DSM 13855 hypothetical protein YP_444324.1 233961 R 309807 CDS YP_444325.1 83814338 3851385 235935..236831 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 236831 3851385 SRU_0172 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_444325.1 235935 D 309807 CDS YP_444326.1 83816351 3851847 237008..240733 1 NC_007677.1 hypothetical protein 240733 3851847 SRU_0173 Salinibacter ruber DSM 13855 hypothetical protein YP_444326.1 237008 D 309807 CDS YP_444327.1 83816650 3852104 complement(241846..244590) 1 NC_007677.1 hypothetical protein 244590 3852104 SRU_0174 Salinibacter ruber DSM 13855 hypothetical protein YP_444327.1 241846 R 309807 CDS YP_444328.1 83815826 3851632 complement(244773..245894) 1 NC_007677.1 identified by match to protein family HMM PF04773; anti-sigma factor 245894 3851632 SRU_0175 Salinibacter ruber DSM 13855 anti-sigma factor YP_444328.1 244773 R 309807 CDS YP_444329.1 83815376 3850672 complement(245884..246468) 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; ECF subfamily RNA polymerase sigma-70 factor 246468 3850672 SRU_0176 Salinibacter ruber DSM 13855 ECF subfamily RNA polymerase sigma-70 factor YP_444329.1 245884 R 309807 CDS YP_444330.1 83814636 3851449 complement(246627..248729) 1 NC_007677.1 identified by match to protein family HMM PF01968; match to protein family HMM PF05378; 5-oxoprolinase 248729 3851449 SRU_0177 Salinibacter ruber DSM 13855 5-oxoprolinase YP_444330.1 246627 R 309807 CDS YP_444331.1 83816285 3852047 complement(249037..249333) 1 NC_007677.1 identified by match to protein family HMM PF03683; hypothetical protein 249333 3852047 SRU_0178 Salinibacter ruber DSM 13855 hypothetical protein YP_444331.1 249037 R 309807 CDS YP_444332.1 83815535 3852208 complement(250002..250409) 1 NC_007677.1 identified by match to protein family HMM PF01953; hypothetical protein 250409 3852208 SRU_0179 Salinibacter ruber DSM 13855 hypothetical protein YP_444332.1 250002 R 309807 CDS YP_444333.1 83816231 3852894 complement(250406..250783) 1 NC_007677.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 250783 3852894 SRU_0180 Salinibacter ruber DSM 13855 nucleotidyltransferase domain-containing protein YP_444333.1 250406 R 309807 CDS YP_444334.1 83815830 3851636 251476..251682 1 NC_007677.1 hypothetical protein 251682 3851636 SRU_0181 Salinibacter ruber DSM 13855 hypothetical protein YP_444334.1 251476 D 309807 CDS YP_444335.1 83815061 3851290 complement(252037..252510) 1 NC_007677.1 hypothetical protein 252510 3851290 SRU_0182 Salinibacter ruber DSM 13855 hypothetical protein YP_444335.1 252037 R 309807 CDS YP_444336.1 83814913 3852362 complement(252563..253021) 1 NC_007677.1 identified by match to protein family HMM TIGR02293; hypothetical protein 253021 3852362 SRU_0183 Salinibacter ruber DSM 13855 hypothetical protein YP_444336.1 252563 R 309807 CDS YP_444337.1 83814200 3850641 253858..254136 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 254136 3850641 SRU_0184 Salinibacter ruber DSM 13855 ISSru2, transposase insA YP_444337.1 253858 D 309807 CDS YP_444338.1 83815672 3851009 complement(254587..254712) 1 NC_007677.1 hypothetical protein 254712 3851009 SRU_0186 Salinibacter ruber DSM 13855 hypothetical protein YP_444338.1 254587 R 309807 CDS YP_444339.1 83815190 3851771 255072..255212 1 NC_007677.1 transcriptional regulator 255212 3851771 SRU_0187 Salinibacter ruber DSM 13855 transcriptional regulator YP_444339.1 255072 D 309807 CDS YP_444340.1 83814454 3852195 257015..258025 1 NC_007677.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase 258025 3852195 SRU_0188 Salinibacter ruber DSM 13855 IS110 family transposase YP_444340.1 257015 D 309807 CDS YP_444341.1 83815044 3852633 complement(260644..264255) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; hypothetical protein 264255 3852633 SRU_0190 Salinibacter ruber DSM 13855 hypothetical protein YP_444341.1 260644 R 309807 CDS YP_444342.1 83815091 3850501 266473..266871 1 NC_007677.1 identified by match to protein family HMM PF01797; IS605 family transposase orfA 266871 3850501 SRU_0191 Salinibacter ruber DSM 13855 IS605 family transposase orfA YP_444342.1 266473 D 309807 CDS YP_444343.1 83815497 3852307 266875..268065 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase orfB 268065 3852307 SRU_0192 Salinibacter ruber DSM 13855 IS605 family transposase orfB YP_444343.1 266875 D 309807 CDS YP_444344.1 83814428 3850714 268122..268388 1 NC_007677.1 hypothetical protein 268388 3850714 SRU_0193 Salinibacter ruber DSM 13855 hypothetical protein YP_444344.1 268122 D 309807 CDS YP_444345.1 83814289 3850358 268385..268642 1 NC_007677.1 hypothetical protein 268642 3850358 SRU_0194 Salinibacter ruber DSM 13855 hypothetical protein YP_444345.1 268385 D 309807 CDS YP_444346.1 83816051 3853161 complement(268835..269788) 1 NC_007677.1 hypothetical protein 269788 3853161 SRU_0195 Salinibacter ruber DSM 13855 hypothetical protein YP_444346.1 268835 R 309807 CDS YP_444347.1 83816839 3851150 complement(271623..272837) 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 272837 3851150 SRU_0196 Salinibacter ruber DSM 13855 IS605 family transposase YP_444347.1 271623 R 309807 CDS YP_444348.1 83814123 3851110 273162..273449 1 NC_007677.1 hypothetical protein 273449 3851110 SRU_0197 Salinibacter ruber DSM 13855 hypothetical protein YP_444348.1 273162 D 309807 CDS YP_444349.1 83814279 3850348 273511..273918 1 NC_007677.1 identified by match to protein family HMM PF01850; twitching mobility protein PilT 273918 3850348 SRU_0198 Salinibacter ruber DSM 13855 twitching mobility protein PilT YP_444349.1 273511 D 309807 CDS YP_444350.1 83816664 3852665 274156..274566 1 NC_007677.1 glycosyl transferase family protein 274566 3852665 SRU_0199 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_444350.1 274156 D 309807 CDS YP_444351.1 83815865 3852523 274634..275893 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 275893 3852523 SRU_0200 Salinibacter ruber DSM 13855 IS605 family transposase YP_444351.1 274634 D 309807 CDS YP_444352.1 83815309 3852138 275875..276522 1 NC_007677.1 colanic acid biosynthesis glycosyl transferase 276522 3852138 SRU_0201 Salinibacter ruber DSM 13855 colanic acid biosynthesis glycosyl transferase YP_444352.1 275875 D 309807 CDS YP_444353.1 83814576 3852965 276522..276926 1 NC_007677.1 hypothetical protein 276926 3852965 SRU_0202 Salinibacter ruber DSM 13855 hypothetical protein YP_444353.1 276522 D 309807 CDS YP_444354.1 83815556 3852229 276937..277242 1 NC_007677.1 hypothetical protein 277242 3852229 SRU_0203 Salinibacter ruber DSM 13855 hypothetical protein YP_444354.1 276937 D 309807 CDS YP_444355.1 83814770 3851700 277233..277598 1 NC_007677.1 identified by match to protein family HMM PF04255; hypothetical protein 277598 3851700 SRU_0204 Salinibacter ruber DSM 13855 hypothetical protein YP_444355.1 277233 D 309807 CDS YP_444356.1 83814342 3851389 complement(277717..277878) 1 NC_007677.1 hypothetical protein 277878 3851389 SRU_0205 Salinibacter ruber DSM 13855 hypothetical protein YP_444356.1 277717 R 309807 CDS YP_444357.1 83816665 3852666 278165..278497 1 NC_007677.1 hypothetical protein 278497 3852666 SRU_0206 Salinibacter ruber DSM 13855 hypothetical protein YP_444357.1 278165 D 309807 CDS YP_444358.1 83815874 3852532 278512..278955 1 NC_007677.1 identified by match to protein family HMM PF01850; twitching mobility protein PilT 278955 3852532 SRU_0207 Salinibacter ruber DSM 13855 twitching mobility protein PilT YP_444358.1 278512 D 309807 CDS YP_444359.1 83815596 3850777 279185..279568 1 NC_007677.1 hypothetical protein 279568 3850777 SRU_0208 Salinibacter ruber DSM 13855 hypothetical protein YP_444359.1 279185 D 309807 CDS YP_444360.1 83815101 3850511 279720..280046 1 NC_007677.1 hypothetical protein 280046 3850511 SRU_0209 Salinibacter ruber DSM 13855 hypothetical protein YP_444360.1 279720 D 309807 CDS YP_444361.1 83815519 3852329 280043..280435 1 NC_007677.1 identified by match to protein family HMM PF01850; twitching mobility protein PilT 280435 3852329 SRU_0210 Salinibacter ruber DSM 13855 twitching mobility protein PilT YP_444361.1 280043 D 309807 CDS YP_444362.1 83816646 3852100 complement(280723..281544) 1 NC_007677.1 identified by match to protein family HMM PF05685; hypothetical protein 281544 3852100 SRU_0211 Salinibacter ruber DSM 13855 hypothetical protein YP_444362.1 280723 R 309807 CDS YP_444363.1 83814465 3852206 281827..281952 1 NC_007677.1 hypothetical protein 281952 3852206 SRU_0212 Salinibacter ruber DSM 13855 hypothetical protein YP_444363.1 281827 D 309807 CDS YP_444364.1 83815371 3850667 282002..282568 1 NC_007677.1 carbamoyltransferase 282568 3850667 SRU_0213 Salinibacter ruber DSM 13855 carbamoyltransferase YP_444364.1 282002 D 309807 CDS YP_444365.1 83816005 3851657 283993..284106 1 NC_007677.1 hypothetical protein 284106 3851657 SRU_0214 Salinibacter ruber DSM 13855 hypothetical protein YP_444365.1 283993 D 309807 CDS YP_444366.1 83814150 3850943 284357..284509 1 NC_007677.1 hypothetical protein 284509 3850943 SRU_0215 Salinibacter ruber DSM 13855 hypothetical protein YP_444366.1 284357 D 309807 CDS YP_444367.1 83814758 3851376 284682..285260 1 NC_007677.1 identified by match to protein family HMM PF05685; hypothetical protein 285260 3851376 SRU_0216 Salinibacter ruber DSM 13855 hypothetical protein YP_444367.1 284682 D 309807 CDS YP_444368.1 83814155 3850478 286495..286638 1 NC_007677.1 hypothetical protein 286638 3850478 SRU_0217 Salinibacter ruber DSM 13855 hypothetical protein YP_444368.1 286495 D 309807 CDS YP_444369.1 83815031 3852620 286653..287111 1 NC_007677.1 hypothetical protein 287111 3852620 SRU_0218 Salinibacter ruber DSM 13855 hypothetical protein YP_444369.1 286653 D 309807 CDS YP_444370.1 83815660 3850997 287207..288538 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 288538 3850997 SRU_0219 Salinibacter ruber DSM 13855 IS605 family transposase YP_444370.1 287207 D 309807 CDS YP_444371.1 83816334 3851961 288749..289222 1 NC_007677.1 O-acetyl transferase 289222 3851961 SRU_0220 Salinibacter ruber DSM 13855 O-acetyl transferase YP_444371.1 288749 D 309807 CDS YP_444372.1 83814907 3852356 289879..290385 1 NC_007677.1 hypothetical protein 290385 3852356 SRU_0221 Salinibacter ruber DSM 13855 hypothetical protein YP_444372.1 289879 D 309807 CDS YP_444373.1 83815699 3850606 290735..291061 1 NC_007677.1 hypothetical protein 291061 3850606 SRU_0222 Salinibacter ruber DSM 13855 hypothetical protein YP_444373.1 290735 D 309807 CDS YP_444374.1 83814422 3853006 292776..294032 1 NC_007677.1 identified by match to protein family HMM PF00534; colanic acid biosynthesis glycosyl transferase 294032 3853006 SRU_0224 Salinibacter ruber DSM 13855 colanic acid biosynthesis glycosyl transferase YP_444374.1 292776 D 309807 CDS YP_444375.1 83815261 3853029 294420..295919 1 NC_007677.1 hypothetical protein 295919 3853029 SRU_0225 Salinibacter ruber DSM 13855 hypothetical protein YP_444375.1 294420 D 309807 CDS YP_444376.1 83816075 3853185 complement(296362..297318) 1 NC_007677.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase 297318 3853185 SRU_0226 Salinibacter ruber DSM 13855 IS110 family transposase YP_444376.1 296362 R 309807 CDS YP_444377.1 83815435 3852284 complement(299557..299772) 1 NC_007677.1 hypothetical protein 299772 3852284 SRU_0228 Salinibacter ruber DSM 13855 hypothetical protein YP_444377.1 299557 R 309807 CDS YP_444378.1 83815657 3850994 complement(304039..306099) 1 NC_007677.1 hypothetical protein 306099 3850994 SRU_0231 Salinibacter ruber DSM 13855 hypothetical protein YP_444378.1 304039 R 309807 CDS YP_444379.1 83814479 3851798 308573..309118 1 NC_007677.1 hypothetical protein 309118 3851798 SRU_0232 Salinibacter ruber DSM 13855 hypothetical protein YP_444379.1 308573 D 309807 CDS YP_444380.1 83815403 3852978 312355..312651 1 NC_007677.1 identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator 312651 3852978 SRU_0234 Salinibacter ruber DSM 13855 AbrB family transcriptional regulator YP_444380.1 312355 D 309807 CDS YP_444381.1 83814412 3852996 312638..313039 1 NC_007677.1 hypothetical protein 313039 3852996 SRU_0235 Salinibacter ruber DSM 13855 hypothetical protein YP_444381.1 312638 D 309807 CDS YP_444382.1 83814817 3852383 313832..315058 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase 315058 3852383 SRU_0236 Salinibacter ruber DSM 13855 transposase YP_444382.1 313832 D 309807 CDS YP_444383.1 83814220 3850465 315101..316813 1 NC_007677.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 316813 groEL 3850465 groEL Salinibacter ruber DSM 13855 chaperonin GroEL YP_444383.1 315101 D 309807 CDS YP_444384.1 83816436 3852803 317533..319095 1 NC_007677.1 identified by match to protein family HMM PF00245; alkaline phosphatase family protein 319095 3852803 SRU_0238 Salinibacter ruber DSM 13855 alkaline phosphatase family protein YP_444384.1 317533 D 309807 CDS YP_444385.1 83815742 3852750 complement(319474..320610) 1 NC_007677.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A 320610 3852750 SRU_0239 Salinibacter ruber DSM 13855 lipoate-protein ligase A YP_444385.1 319474 R 309807 CDS YP_444386.1 83814518 3852455 complement(320611..321066) 1 NC_007677.1 hypothetical protein 321066 3852455 SRU_0240 Salinibacter ruber DSM 13855 hypothetical protein YP_444386.1 320611 R 309807 CDS YP_444387.1 83816373 3851869 complement(321202..321432) 1 NC_007677.1 hypothetical protein 321432 3851869 SRU_0241 Salinibacter ruber DSM 13855 hypothetical protein YP_444387.1 321202 R 309807 CDS YP_444388.1 83816113 3850593 complement(321532..322200) 1 NC_007677.1 hypothetical protein 322200 3850593 SRU_0242 Salinibacter ruber DSM 13855 hypothetical protein YP_444388.1 321532 R 309807 CDS YP_444389.1 83815572 3852245 complement(322210..322656) 1 NC_007677.1 identified by match to protein family HMM PF00037; ferredoxin 322656 3852245 SRU_0243 Salinibacter ruber DSM 13855 ferredoxin YP_444389.1 322210 R 309807 CDS YP_444390.1 83815531 3852341 323040..323690 1 NC_007677.1 hypothetical protein 323690 3852341 SRU_0244 Salinibacter ruber DSM 13855 hypothetical protein YP_444390.1 323040 D 309807 CDS YP_444391.1 83816194 3851807 324454..325992 1 NC_007677.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 325992 3851807 SRU_0245 Salinibacter ruber DSM 13855 FAD dependent oxidoreductase YP_444391.1 324454 D 309807 CDS YP_444392.1 83816648 3852102 326456..327484 1 NC_007677.1 hypothetical protein 327484 3852102 SRU_0246 Salinibacter ruber DSM 13855 hypothetical protein YP_444392.1 326456 D 309807 CDS YP_444393.1 83815110 3852641 328638..329267 1 NC_007677.1 identified by match to protein family HMM PF00565; hypothetical protein 329267 3852641 SRU_0247 Salinibacter ruber DSM 13855 hypothetical protein YP_444393.1 328638 D 309807 CDS YP_444394.1 83815856 3852514 complement(329551..330429) 1 NC_007677.1 identified by match to protein family HMM PF02517; CAAX amino protease 330429 3852514 SRU_0248 Salinibacter ruber DSM 13855 CAAX amino protease YP_444394.1 329551 R 309807 CDS YP_444395.1 83816621 3852075 complement(331736..332404) 1 NC_007677.1 hypothetical protein 332404 3852075 SRU_0249 Salinibacter ruber DSM 13855 hypothetical protein YP_444395.1 331736 R 309807 CDS YP_444396.1 83814619 3851471 333393..333485 1 NC_007677.1 hypothetical protein 333485 3851471 SRU_0250 Salinibacter ruber DSM 13855 hypothetical protein YP_444396.1 333393 D 309807 CDS YP_444397.1 83814875 3851415 333682..337038 1 NC_007677.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box/GGDEF family protein 337038 3851415 SRU_0251 Salinibacter ruber DSM 13855 sensory box/GGDEF family protein YP_444397.1 333682 D 309807 CDS YP_444398.1 83815035 3852624 337039..337509 1 NC_007677.1 identified by match to protein family HMM PF00072; TcrA 337509 3852624 SRU_0252 Salinibacter ruber DSM 13855 TcrA YP_444398.1 337039 D 309807 CDS YP_444399.1 83816226 3851839 337527..338651 1 NC_007677.1 identified by match to protein family HMM PF03130; HEAT repeat-containing PBS lyase 338651 3851839 SRU_0253 Salinibacter ruber DSM 13855 HEAT repeat-containing PBS lyase YP_444399.1 337527 D 309807 CDS YP_444400.1 83816008 3851660 338747..340051 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 340051 3851660 SRU_0254 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_444400.1 338747 D 309807 CDS YP_444401.1 83815209 3852290 340089..340892 1 NC_007677.1 hypothetical protein 340892 3852290 SRU_0255 Salinibacter ruber DSM 13855 hypothetical protein YP_444401.1 340089 D 309807 CDS YP_444402.1 83815247 3853015 342129..342500 1 NC_007677.1 (p)ppGpp 3-pyrophosphohydrolase 342500 3853015 SRU_0256 Salinibacter ruber DSM 13855 (p)ppGpp 3-pyrophosphohydrolase YP_444402.1 342129 D 309807 CDS YP_444403.1 83814456 3852197 343338..343784 1 NC_007677.1 hypothetical protein 343784 3852197 SRU_0257 Salinibacter ruber DSM 13855 hypothetical protein YP_444403.1 343338 D 309807 CDS YP_444404.1 83815815 3851621 complement(344731..345489) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; alginate biosynthesis regulatory protein 345489 3851621 SRU_0258 Salinibacter ruber DSM 13855 alginate biosynthesis regulatory protein YP_444404.1 344731 R 309807 CDS YP_444405.1 83814932 3850984 complement(345525..346502) 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; histidine kinase family protein 346502 3850984 SRU_0259 Salinibacter ruber DSM 13855 histidine kinase family protein YP_444405.1 345525 R 309807 CDS YP_444406.1 83816269 3852932 complement(346834..348369) 1 NC_007677.1 identified by match to protein family HMM PF00795; apolipoprotein N-acyltransferase 348369 lnt 3852932 lnt Salinibacter ruber DSM 13855 apolipoprotein N-acyltransferase YP_444406.1 346834 R 309807 CDS YP_444407.1 83815590 3850771 348791..349354 1 NC_007677.1 identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 349354 3850771 SRU_0261 Salinibacter ruber DSM 13855 osteoblast specific factor 2-related protein YP_444407.1 348791 D 309807 CDS YP_444408.1 83814980 3851189 complement(352939..353328) 1 NC_007677.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB 353328 3851189 SRU_0262 Salinibacter ruber DSM 13855 TonB YP_444408.1 352939 R 309807 CDS YP_444409.1 83815036 3852625 353389..353487 1 NC_007677.1 hypothetical protein 353487 3852625 SRU_0263 Salinibacter ruber DSM 13855 hypothetical protein YP_444409.1 353389 D 309807 CDS YP_444410.1 83816516 3851990 complement(353651..354580) 1 NC_007677.1 hypothetical protein 354580 3851990 SRU_0264 Salinibacter ruber DSM 13855 hypothetical protein YP_444410.1 353651 R 309807 CDS YP_444411.1 83814507 3852444 complement(354768..355718) 1 NC_007677.1 hypothetical protein 355718 3852444 SRU_0265 Salinibacter ruber DSM 13855 hypothetical protein YP_444411.1 354768 R 309807 CDS YP_444412.1 83815345 3853191 complement(356818..358080) 1 NC_007677.1 identified by match to protein family HMM PF00953; glycosyl transferase N-acetylglucosaminyltransferase), RgpG 358080 3853191 SRU_0266 Salinibacter ruber DSM 13855 glycosyl transferase N-acetylglucosaminyltransferase), RgpG YP_444412.1 356818 R 309807 CDS YP_444413.1 83816109 3850589 358762..360381 1 NC_007677.1 hypothetical protein 360381 3850589 SRU_0267 Salinibacter ruber DSM 13855 hypothetical protein YP_444413.1 358762 D 309807 CDS YP_444414.1 83814669 3852254 complement(360472..361548) 1 NC_007677.1 hypothetical protein 361548 3852254 SRU_0268 Salinibacter ruber DSM 13855 hypothetical protein YP_444414.1 360472 R 309807 CDS YP_444415.1 83815366 3850662 complement(361774..363876) 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 363876 recG 3850662 recG Salinibacter ruber DSM 13855 ATP-dependent DNA helicase RecG YP_444415.1 361774 R 309807 CDS YP_444416.1 83814966 3851272 complement(364005..364691) 1 NC_007677.1 hypothetical protein 364691 3851272 SRU_0270 Salinibacter ruber DSM 13855 hypothetical protein YP_444416.1 364005 R 309807 CDS YP_444417.1 83815498 3852308 365109..366554 1 NC_007677.1 hypothetical protein 366554 3852308 SRU_0271 Salinibacter ruber DSM 13855 hypothetical protein YP_444417.1 365109 D 309807 CDS YP_444418.1 83814318 3851521 366829..367239 1 NC_007677.1 hypothetical protein 367239 3851521 SRU_0272 Salinibacter ruber DSM 13855 hypothetical protein YP_444418.1 366829 D 309807 CDS YP_444419.1 83815348 3853194 367232..367687 1 NC_007677.1 phosphodiesterase/alkaline phosphatase D-like protein 367687 3853194 SRU_0273 Salinibacter ruber DSM 13855 phosphodiesterase/alkaline phosphatase D-like protein YP_444419.1 367232 D 309807 CDS YP_444420.1 83814360 3851348 368061..369338 1 NC_007677.1 collagen a1 369338 3851348 SRU_0274 Salinibacter ruber DSM 13855 collagen a1 YP_444420.1 368061 D 309807 CDS YP_444421.1 83815601 3850782 369681..371711 1 NC_007677.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 371711 tkt 3850782 tkt Salinibacter ruber DSM 13855 transketolase YP_444421.1 369681 D 309807 CDS YP_444422.1 83814952 3851335 371828..372508 1 NC_007677.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 372508 3851335 SRU_0276 Salinibacter ruber DSM 13855 translaldolase YP_444422.1 371828 D 309807 CDS YP_444423.1 83814368 3851356 complement(372586..374208) 1 NC_007677.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; sodium/glucose cotransporter 374208 3851356 SRU_0277 Salinibacter ruber DSM 13855 sodium/glucose cotransporter YP_444423.1 372586 R 309807 CDS YP_444424.1 83816427 3852794 complement(374655..375644) 1 NC_007677.1 hypothetical protein 375644 3852794 SRU_0278 Salinibacter ruber DSM 13855 hypothetical protein YP_444424.1 374655 R 309807 CDS YP_444425.1 83815167 3850362 complement(375691..376764) 1 NC_007677.1 hypothetical protein 376764 3850362 SRU_0279 Salinibacter ruber DSM 13855 hypothetical protein YP_444425.1 375691 R 309807 CDS YP_444426.1 83816744 3852551 complement(376761..377438) 1 NC_007677.1 hypothetical protein 377438 3852551 SRU_0280 Salinibacter ruber DSM 13855 hypothetical protein YP_444426.1 376761 R 309807 CDS YP_444427.1 83815651 3850988 complement(377533..378696) 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 378696 3850988 SRU_0281 Salinibacter ruber DSM 13855 glycoside hydrolase YP_444427.1 377533 R 309807 CDS YP_444428.1 83814876 3851298 complement(378750..379535) 1 NC_007677.1 hypothetical protein 379535 3851298 SRU_0282 Salinibacter ruber DSM 13855 hypothetical protein YP_444428.1 378750 R 309807 CDS YP_444429.1 83814090 3850413 complement(379694..380173) 1 NC_007677.1 hypothetical protein 380173 3850413 SRU_0283 Salinibacter ruber DSM 13855 hypothetical protein YP_444429.1 379694 R 309807 CDS YP_444430.1 83816588 3853118 380491..380598 1 NC_007677.1 hypothetical protein 380598 3853118 SRU_0284 Salinibacter ruber DSM 13855 hypothetical protein YP_444430.1 380491 D 309807 CDS YP_444431.1 83815639 3850702 380669..381445 1 NC_007677.1 hypothetical protein 381445 3850702 SRU_0285 Salinibacter ruber DSM 13855 hypothetical protein YP_444431.1 380669 D 309807 CDS YP_444432.1 83815354 3853201 381541..382545 1 NC_007677.1 hypothetical protein 382545 3853201 SRU_0286 Salinibacter ruber DSM 13855 hypothetical protein YP_444432.1 381541 D 309807 CDS YP_444433.1 83814424 3853008 382588..383052 1 NC_007677.1 hypothetical protein 383052 3853008 SRU_0287 Salinibacter ruber DSM 13855 hypothetical protein YP_444433.1 382588 D 309807 CDS YP_444434.1 83815536 3852209 383123..384013 1 NC_007677.1 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 384013 3852209 SRU_0288 Salinibacter ruber DSM 13855 alpha/beta fold family hydrolase YP_444434.1 383123 D 309807 CDS YP_444435.1 83816041 3853151 384104..384421 1 NC_007677.1 hypothetical protein 384421 3853151 SRU_0289 Salinibacter ruber DSM 13855 hypothetical protein YP_444435.1 384104 D 309807 CDS YP_444436.1 83814280 3850349 384458..384832 1 NC_007677.1 identified by match to protein family HMM PF05154; TM2 domain-containing protein 384832 3850349 SRU_0290 Salinibacter ruber DSM 13855 TM2 domain-containing protein YP_444436.1 384458 D 309807 CDS YP_444437.1 83816581 3853111 complement(384848..386785) 1 NC_007677.1 identified by match to protein family HMM PF01464; match to protein family HMM PF01476; peptidoglycan N-acetylmuramoylhydrolase 386785 3853111 SRU_0291 Salinibacter ruber DSM 13855 peptidoglycan N-acetylmuramoylhydrolase YP_444437.1 384848 R 309807 CDS YP_444438.1 83815160 3850394 complement(386727..387911) 1 NC_007677.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; transporter 387911 3850394 SRU_0292 Salinibacter ruber DSM 13855 transporter YP_444438.1 386727 R 309807 CDS YP_444439.1 83815734 3852742 complement(387917..388084) 1 NC_007677.1 hypothetical protein 388084 3852742 SRU_0293 Salinibacter ruber DSM 13855 hypothetical protein YP_444439.1 387917 R 309807 CDS YP_444440.1 83816421 3851761 complement(388187..388879) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter nucleotide binding/ATPase protein 388879 3851761 SRU_0294 Salinibacter ruber DSM 13855 ABC transporter nucleotide binding/ATPase protein YP_444440.1 388187 R 309807 CDS YP_444441.1 83814198 3850639 complement(388887..389165) 1 NC_007677.1 hypothetical protein 389165 3850639 SRU_0295 Salinibacter ruber DSM 13855 hypothetical protein YP_444441.1 388887 R 309807 CDS YP_444442.1 83815562 3852235 complement(389188..391107) 1 NC_007677.1 identified by match to protein family HMM PF03572; S41 family peptidase 391107 3852235 SRU_0296 Salinibacter ruber DSM 13855 S41 family peptidase YP_444442.1 389188 R 309807 CDS YP_444443.1 83816130 3850532 complement(391125..394610) 1 NC_007677.1 identified by match to protein family HMM PF03572; match to protein family HMM PF05569; S41 family peptidase 394610 3850532 SRU_0297 Salinibacter ruber DSM 13855 S41 family peptidase YP_444443.1 391125 R 309807 CDS YP_444444.1 83816739 3852546 complement(394641..395075) 1 NC_007677.1 identified by match to protein family HMM PF03965; BlaI/MecI/CopY family transcriptional regulator 395075 3852546 SRU_0298 Salinibacter ruber DSM 13855 BlaI/MecI/CopY family transcriptional regulator YP_444444.1 394641 R 309807 CDS YP_444445.1 83815945 3850443 395334..397157 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 397157 recQ 3850443 recQ Salinibacter ruber DSM 13855 ATP-dependent DNA helicase RecQ YP_444445.1 395334 D 309807 CDS YP_444446.1 83816105 3850585 399757..402441 1 NC_007677.1 identified by match to protein family HMM PF02867; match to protein family HMM TIGR02504; ribonucleoside-diphosphate reductase 402441 3850585 SRU_0300 Salinibacter ruber DSM 13855 ribonucleoside-diphosphate reductase YP_444446.1 399757 D 309807 CDS YP_444447.1 83816719 3850836 402598..405210 1 NC_007677.1 catalyzes the 4-phospho-L-aspartate from L-aspartate and the formation of lysine from meso-2,6-diaminoheptanedioate; bifunctional aspartate kinase/diaminopimelate decarboxylase protein 405210 3850836 SRU_0301 Salinibacter ruber DSM 13855 bifunctional aspartate kinase/diaminopimelate decarboxylase protein YP_444447.1 402598 D 309807 CDS YP_444448.1 83814106 3850919 complement(405235..405909) 1 NC_007677.1 identified by match to protein family HMM PF05685; hypothetical protein 405909 3850919 SRU_0302 Salinibacter ruber DSM 13855 hypothetical protein YP_444448.1 405235 R 309807 CDS YP_444449.1 83815096 3850506 405955..406722 1 NC_007677.1 identified by match to protein family HMM PF01987; match to protein family HMM TIGR00266; hypothetical protein 406722 3850506 SRU_0303 Salinibacter ruber DSM 13855 hypothetical protein YP_444449.1 405955 D 309807 CDS YP_444450.1 83816438 3852805 406996..407418 1 NC_007677.1 identified by similarity to SP:P04153; match to protein family HMM PF00717; umuD protein 407418 umuD 3852805 umuD Salinibacter ruber DSM 13855 umuD protein YP_444450.1 406996 D 309807 CDS YP_444451.1 83815256 3853024 407473..408753 1 NC_007677.1 identified by match to protein family HMM PF00817; protein umuC 408753 3853024 SRU_0305 Salinibacter ruber DSM 13855 protein umuC YP_444451.1 407473 D 309807 CDS YP_444452.1 83816087 3850567 408911..410557 1 NC_007677.1 identified by match to protein family HMM PF05670; RNA-biniding protein 410557 3850567 SRU_0306 Salinibacter ruber DSM 13855 RNA-biniding protein YP_444452.1 408911 D 309807 CDS YP_444453.1 83816740 3852547 complement(410616..413603) 1 NC_007677.1 hypothetical protein 413603 3852547 SRU_0307 Salinibacter ruber DSM 13855 hypothetical protein YP_444453.1 410616 R 309807 CDS YP_444454.1 83816541 3851884 414287..416176 1 NC_007677.1 identified by similarity to SP:Q59746; match to protein family HMM PF00116; nitrous oxide reductase 416176 nosZ 3851884 nosZ Salinibacter ruber DSM 13855 nitrous oxide reductase YP_444454.1 414287 D 309807 CDS YP_444455.1 83816301 3852063 416177..416959 1 NC_007677.1 hypothetical protein 416959 3852063 SRU_0309 Salinibacter ruber DSM 13855 hypothetical protein YP_444455.1 416177 D 309807 CDS YP_444456.1 83814723 3851477 417050..418447 1 NC_007677.1 identified by match to protein family HMM PF05048; NosD protein 418447 nosD 3851477 nosD Salinibacter ruber DSM 13855 NosD protein YP_444456.1 417050 D 309807 CDS YP_444457.1 83815068 3851297 418444..419124 1 NC_007677.1 identified by match to protein family HMM PF00005; NosF protein 419124 3851297 SRU_0311 Salinibacter ruber DSM 13855 NosF protein YP_444457.1 418444 D 309807 CDS YP_444458.1 83815159 3850393 419494..420978 1 NC_007677.1 hypothetical protein 420978 3850393 SRU_0312 Salinibacter ruber DSM 13855 hypothetical protein YP_444458.1 419494 D 309807 CDS YP_444459.1 83816809 3851237 421496..422017 1 NC_007677.1 identified by similarity to GB:AAV46104.1; match to protein family HMM PF00116; cytochrome c oxidase subunit II 422017 coxB2 3851237 coxB2 Salinibacter ruber DSM 13855 cytochrome c oxidase subunit II YP_444459.1 421496 D 309807 CDS YP_444460.1 83816011 3851663 422014..423687 1 NC_007677.1 identified by similarity to GB:AAV46105.1; match to protein family HMM PF00115; cytochrome c oxidase subunit I 423687 coxA2 3851663 coxA2 Salinibacter ruber DSM 13855 cytochrome c oxidase subunit I YP_444460.1 422014 D 309807 CDS YP_444461.1 83815421 3852270 423694..424419 1 NC_007677.1 hypothetical protein 424419 3852270 SRU_0315 Salinibacter ruber DSM 13855 hypothetical protein YP_444461.1 423694 D 309807 CDS YP_444462.1 83815146 3850380 424642..425451 1 NC_007677.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 425451 3850380 SRU_0316 Salinibacter ruber DSM 13855 GntR family transcriptional regulator YP_444462.1 424642 D 309807 CDS YP_444463.1 83815906 3851596 complement(425513..426712) 1 NC_007677.1 identified by match to protein family HMM PF07992; filamentous hemagglutinin 426712 3851596 SRU_0317 Salinibacter ruber DSM 13855 filamentous hemagglutinin YP_444463.1 425513 R 309807 CDS YP_444464.1 83814378 3851249 complement(426785..427561) 1 NC_007677.1 hypothetical protein 427561 3851249 SRU_0318 Salinibacter ruber DSM 13855 hypothetical protein YP_444464.1 426785 R 309807 CDS YP_444465.1 83815327 3852117 complement(427842..428438) 1 NC_007677.1 hypothetical protein 428438 3852117 SRU_0319 Salinibacter ruber DSM 13855 hypothetical protein YP_444465.1 427842 R 309807 CDS YP_444466.1 83815958 3850456 428566..428796 1 NC_007677.1 hypothetical protein 428796 3850456 SRU_0320 Salinibacter ruber DSM 13855 hypothetical protein YP_444466.1 428566 D 309807 CDS YP_444467.1 83814160 3850483 428793..429011 1 NC_007677.1 hypothetical protein 429011 3850483 SRU_0321 Salinibacter ruber DSM 13855 hypothetical protein YP_444467.1 428793 D 309807 CDS YP_444468.1 83814779 3850871 429042..430556 1 NC_007677.1 identified by match to protein family HMM PF00115; cytochrome-c oxidase 430556 3850871 SRU_0322 Salinibacter ruber DSM 13855 cytochrome-c oxidase YP_444468.1 429042 D 309807 CDS YP_444469.1 83814228 3850473 430601..431197 1 NC_007677.1 identified by match to protein family HMM PF02433; cytochrome c oxidase, cbb3-type subunit II 431197 3850473 SRU_0323 Salinibacter ruber DSM 13855 cytochrome c oxidase, cbb3-type subunit II YP_444469.1 430601 D 309807 CDS YP_444470.1 83815194 3851775 431254..432033 1 NC_007677.1 identified by match to protein family HMM PF00034; cytochrome c family protein 432033 3851775 SRU_0324 Salinibacter ruber DSM 13855 cytochrome c family protein YP_444470.1 431254 D 309807 CDS YP_444471.1 83814406 3851179 432247..434214 1 NC_007677.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase subfamily protein 434214 3851179 SRU_0325 Salinibacter ruber DSM 13855 heavy metal translocating P-type ATPase subfamily protein YP_444471.1 432247 D 309807 CDS YP_444472.1 83816853 3852874 434440..436005 1 NC_007677.1 identified by match to protein family HMM PF00581; match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 436005 3852874 SRU_0326 Salinibacter ruber DSM 13855 metallo-beta-lactamase superfamily protein YP_444472.1 434440 D 309807 CDS YP_444473.1 83816202 3851815 436101..436865 1 NC_007677.1 identified by match to protein family HMM PF01925; hypothetical protein 436865 3851815 SRU_0327 Salinibacter ruber DSM 13855 hypothetical protein YP_444473.1 436101 D 309807 CDS YP_444474.1 83815568 3852241 437300..438049 1 NC_007677.1 identified by match to protein family HMM PF02535; gufA protein 438049 gufA 3852241 gufA Salinibacter ruber DSM 13855 gufA protein YP_444474.1 437300 D 309807 CDS YP_444475.1 83816459 3852826 438243..438755 1 NC_007677.1 identified by match to protein family HMM PF00210; general stress protein 20U 438755 3852826 SRU_0329 Salinibacter ruber DSM 13855 general stress protein 20U YP_444475.1 438243 D 309807 CDS YP_444476.1 83815598 3850779 438907..442050 1 NC_007677.1 identified by match to protein family HMM PF00873; cation/multidrug efflux pump 442050 3850779 SRU_0330 Salinibacter ruber DSM 13855 cation/multidrug efflux pump YP_444476.1 438907 D 309807 CDS YP_444477.1 83815196 3851777 442055..442642 1 NC_007677.1 hypothetical protein 442642 3851777 SRU_0331 Salinibacter ruber DSM 13855 hypothetical protein YP_444477.1 442055 D 309807 CDS YP_444478.1 83814392 3851165 complement(442680..443393) 1 NC_007677.1 identified by match to protein family HMM PF03070; TENA/THI-4 family protein 443393 3851165 SRU_0332 Salinibacter ruber DSM 13855 TENA/THI-4 family protein YP_444478.1 442680 R 309807 CDS YP_444479.1 83816795 3851223 complement(443673..447008) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component system sensor protein 447008 3851223 SRU_0333 Salinibacter ruber DSM 13855 two-component system sensor protein YP_444479.1 443673 R 309807 CDS YP_444480.1 83815793 3852176 complement(447192..447815) 1 NC_007677.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 447815 3852176 SRU_0334 Salinibacter ruber DSM 13855 Ser/Thr protein phosphatase family protein YP_444480.1 447192 R 309807 CDS YP_444481.1 83816696 3850813 complement(447916..450297) 1 NC_007677.1 identified by similarity to PIR:G84370; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; heavy-metal transporting CPx-type ATPase 450297 3850813 SRU_0335 Salinibacter ruber DSM 13855 heavy-metal transporting CPx-type ATPase YP_444481.1 447916 R 309807 CDS YP_444482.1 83815839 3851645 450312..454091 1 NC_007677.1 identified by match to protein family HMM PF00989; match to protein family HMM PF01339; match to protein family HMM PF01739; match to protein family HMM PF02518; match to protein family HMM PF03705; match to protein family HMM TIGR00229; protein-glutamate methylesterase CheB 454091 cheB 3851645 cheB Salinibacter ruber DSM 13855 protein-glutamate methylesterase CheB YP_444482.1 450312 D 309807 CDS YP_444483.1 83815387 3850899 454227..455039 1 NC_007677.1 identified by match to protein family HMM PF02673; undecaprenyl-diphosphatase 1 455039 3850899 SRU_0337 Salinibacter ruber DSM 13855 undecaprenyl-diphosphatase 1 YP_444483.1 454227 D 309807 CDS YP_444484.1 83814597 3851077 455681..456508 1 NC_007677.1 ABC transporter substrate-binding protein 456508 3851077 SRU_0338 Salinibacter ruber DSM 13855 ABC transporter substrate-binding protein YP_444484.1 455681 D 309807 CDS YP_444485.1 83815424 3852273 456656..458173 1 NC_007677.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; Era/ThdF family GTP-binding protein 458173 3852273 SRU_0339 Salinibacter ruber DSM 13855 Era/ThdF family GTP-binding protein YP_444485.1 456656 D 309807 CDS YP_444486.1 83814634 3851447 458390..459118 1 NC_007677.1 identified by match to protein family HMM PF01066; phosphatidylcholine synthase 459118 3851447 SRU_0340 Salinibacter ruber DSM 13855 phosphatidylcholine synthase YP_444486.1 458390 D 309807 CDS YP_444487.1 83816339 3851966 complement(459165..459869) 1 NC_007677.1 identified by match to protein family HMM PF03886; hypothetical protein 459869 3851966 SRU_0341 Salinibacter ruber DSM 13855 hypothetical protein YP_444487.1 459165 R 309807 CDS YP_444488.1 83815739 3852747 complement(459874..460908) 1 NC_007677.1 identified by match to protein family HMM PF02470; paraquat-inducible protein B 460908 3852747 SRU_0342 Salinibacter ruber DSM 13855 paraquat-inducible protein B YP_444488.1 459874 R 309807 CDS YP_444489.1 83815085 3852381 complement(460942..461709) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 461709 3852381 SRU_0343 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_444489.1 460942 R 309807 CDS YP_444490.1 83814459 3852200 complement(461905..463020) 1 NC_007677.1 identified by match to protein family HMM PF02405; ABC transporter permease 463020 3852200 SRU_0344 Salinibacter ruber DSM 13855 ABC transporter permease YP_444490.1 461905 R 309807 CDS YP_444491.1 83816827 3851137 463438..463926 1 NC_007677.1 hypothetical protein 463926 3851137 SRU_0345 Salinibacter ruber DSM 13855 hypothetical protein YP_444491.1 463438 D 309807 CDS YP_444492.1 83814826 3852392 complement(464218..464910) 1 NC_007677.1 identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein 464910 3852392 SRU_0346 Salinibacter ruber DSM 13855 OmpA family protein YP_444492.1 464218 R 309807 CDS YP_444493.1 83815229 3851030 complement(465045..466028) 1 NC_007677.1 identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; oxidoreductase family protein 466028 3851030 SRU_0347 Salinibacter ruber DSM 13855 oxidoreductase family protein YP_444493.1 465045 R 309807 CDS YP_444494.1 83816042 3853152 complement(466337..467725) 1 NC_007677.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 467725 pncB 3853152 pncB Salinibacter ruber DSM 13855 nicotinate phosphoribosyltransferase YP_444494.1 466337 R 309807 CDS YP_444495.1 83814366 3851354 complement(467867..470710) 1 NC_007677.1 hypothetical protein 470710 3851354 SRU_0349 Salinibacter ruber DSM 13855 hypothetical protein YP_444495.1 467867 R 309807 CDS YP_444496.1 83815153 3850387 complement(470962..471486) 1 NC_007677.1 hypothetical protein 471486 3850387 SRU_0350 Salinibacter ruber DSM 13855 hypothetical protein YP_444496.1 470962 R 309807 CDS YP_444497.1 83816360 3851856 complement(472071..474194) 1 NC_007677.1 identified by match to protein family HMM TIGR00376; DNA helicase 474194 3851856 SRU_0351 Salinibacter ruber DSM 13855 DNA helicase YP_444497.1 472071 R 309807 CDS YP_444498.1 83814710 3851503 474624..477671 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782; TonB-dependent receptor 477671 cirA 3851503 cirA Salinibacter ruber DSM 13855 TonB-dependent receptor YP_444498.1 474624 D 309807 CDS YP_444499.1 83815113 3852644 477692..478780 1 NC_007677.1 identified by match to protein family HMM PF00512; sensory transduction histidine kinase 478780 3852644 SRU_0353 Salinibacter ruber DSM 13855 sensory transduction histidine kinase YP_444499.1 477692 D 309807 CDS YP_444500.1 83815829 3851635 478750..479253 1 NC_007677.1 identified by match to protein family HMM PF02518; sensor histidine kinase 479253 3851635 SRU_0354 Salinibacter ruber DSM 13855 sensor histidine kinase YP_444500.1 478750 D 309807 CDS YP_444501.1 83815732 3852740 complement(479882..481699) 1 NC_007677.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; sodium/glucose cotransporter 2 481699 3852740 SRU_0355 Salinibacter ruber DSM 13855 sodium/glucose cotransporter 2 YP_444501.1 479882 R 309807 CDS YP_444502.1 83814624 3851437 complement(481763..482710) 1 NC_007677.1 identified by match to protein family HMM PF01609; IS982 family transposase 482710 3851437 SRU_0356 Salinibacter ruber DSM 13855 IS982 family transposase YP_444502.1 481763 R 309807 CDS YP_444503.1 83815215 3852296 482972..484111 1 NC_007677.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 484111 3852296 SRU_0357 Salinibacter ruber DSM 13855 LacI family transcriptional regulator YP_444503.1 482972 D 309807 CDS YP_444504.1 83815527 3852337 484205..487273 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein 487273 3852337 SRU_0358 Salinibacter ruber DSM 13855 outer membrane protein YP_444504.1 484205 D 309807 CDS YP_444505.1 83816856 3852877 487206..488975 1 NC_007677.1 identified by match to protein family HMM PF07980; outer membrane protein 488975 3852877 SRU_0359 Salinibacter ruber DSM 13855 outer membrane protein YP_444505.1 487206 D 309807 CDS YP_444506.1 83814069 3852473 489206..490531 1 NC_007677.1 hypothetical protein 490531 3852473 SRU_0360 Salinibacter ruber DSM 13855 hypothetical protein YP_444506.1 489206 D 309807 CDS YP_444507.1 83814922 3850974 490677..494705 1 NC_007677.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; alpha-amylase 494705 3850974 SRU_0361 Salinibacter ruber DSM 13855 alpha-amylase YP_444507.1 490677 D 309807 CDS YP_444508.1 83815012 3852423 495285..497120 1 NC_007677.1 identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 497120 3852423 SRU_0362 Salinibacter ruber DSM 13855 glycosyl hydrolase family protein YP_444508.1 495285 D 309807 CDS YP_444509.1 83816204 3851817 complement(497197..497799) 1 NC_007677.1 hypothetical protein 497799 3851817 SRU_0363 Salinibacter ruber DSM 13855 hypothetical protein YP_444509.1 497197 R 309807 CDS YP_444510.1 83816258 3852921 497844..498554 1 NC_007677.1 identified by match to protein family HMM PF01812; 5-formyltetrahydrofolate cyclo-ligase 498554 3852921 SRU_0364 Salinibacter ruber DSM 13855 5-formyltetrahydrofolate cyclo-ligase YP_444510.1 497844 D 309807 CDS YP_444511.1 83814404 3851177 498678..499937 1 NC_007677.1 identified by match to protein family HMM PF07690; sugar transporter 499937 3851177 SRU_0365 Salinibacter ruber DSM 13855 sugar transporter YP_444511.1 498678 D 309807 CDS YP_444512.1 83815016 3852428 500333..503419 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 503419 3852428 SRU_0366 Salinibacter ruber DSM 13855 hypothetical protein YP_444512.1 500333 D 309807 CDS YP_444513.1 83815995 3852732 503394..505100 1 NC_007677.1 hypothetical protein 505100 3852732 SRU_0367 Salinibacter ruber DSM 13855 hypothetical protein YP_444513.1 503394 D 309807 CDS YP_444514.1 83815976 3852713 505170..507827 1 NC_007677.1 identified by match to protein family HMM PF00728; match to protein family HMM PF03174; beta-N-acetylhexosaminidase 507827 chb 3852713 chb Salinibacter ruber DSM 13855 beta-N-acetylhexosaminidase YP_444514.1 505170 D 309807 CDS YP_444515.1 83816595 3853125 508116..509129 1 NC_007677.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 509129 rbsR 3853125 rbsR Salinibacter ruber DSM 13855 ribose operon repressor YP_444515.1 508116 D 309807 CDS YP_444516.1 83814925 3850977 509131..510483 1 NC_007677.1 hypothetical protein 510483 3850977 SRU_0370 Salinibacter ruber DSM 13855 hypothetical protein YP_444516.1 509131 D 309807 CDS YP_444517.1 83815324 3852114 510792..512636 1 NC_007677.1 identified by match to protein family HMM PF00474; Na+/proline symporter 512636 3852114 SRU_0371 Salinibacter ruber DSM 13855 Na+/proline symporter YP_444517.1 510792 D 309807 CDS YP_444518.1 83815520 3852330 512684..515623 1 NC_007677.1 identified by match to protein family HMM PF00144; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM TIGR01409; beta-N-acetylglucosaminidase 515623 3852330 SRU_0372 Salinibacter ruber DSM 13855 beta-N-acetylglucosaminidase YP_444518.1 512684 D 309807 CDS YP_444519.1 83814578 3852967 515966..516880 1 NC_007677.1 identified by match to protein family HMM PF01869; N-acetylglucosamine kinase 516880 3852967 SRU_0373 Salinibacter ruber DSM 13855 N-acetylglucosamine kinase YP_444519.1 515966 D 309807 CDS YP_444520.1 83816054 3853164 516877..518781 1 NC_007677.1 identified by match to protein family HMM PF00474; transporter solute:sodium symporter (SSS) family protein 518781 3853164 SRU_0374 Salinibacter ruber DSM 13855 transporter solute:sodium symporter (SSS) family protein YP_444520.1 516877 D 309807 CDS YP_444521.1 83816559 3851903 518896..519126 1 NC_007677.1 hypothetical protein 519126 3851903 SRU_0375 Salinibacter ruber DSM 13855 hypothetical protein YP_444521.1 518896 D 309807 CDS YP_444522.1 83814497 3851719 519126..519365 1 NC_007677.1 hypothetical protein 519365 3851719 SRU_0376 Salinibacter ruber DSM 13855 hypothetical protein YP_444522.1 519126 D 309807 CDS YP_444523.1 83814236 3852584 complement(519369..519716) 1 NC_007677.1 hypothetical protein 519716 3852584 SRU_0377 Salinibacter ruber DSM 13855 hypothetical protein YP_444523.1 519369 R 309807 CDS YP_444524.1 83814291 3851083 complement(519742..520107) 1 NC_007677.1 hypothetical protein 520107 3851083 SRU_0378 Salinibacter ruber DSM 13855 hypothetical protein YP_444524.1 519742 R 309807 CDS YP_444525.1 83815967 3852704 520447..520917 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 520917 3852704 SRU_0380 Salinibacter ruber DSM 13855 hypothetical protein YP_444525.1 520447 D 309807 CDS YP_444526.1 83816575 3851919 complement(520961..522571) 1 NC_007677.1 identified by match to protein family HMM PF00450; carboxypeptidase-like protein 522571 3851919 SRU_0381 Salinibacter ruber DSM 13855 carboxypeptidase-like protein YP_444526.1 520961 R 309807 CDS YP_444527.1 83814711 3851504 complement(522614..523807) 1 NC_007677.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 523807 kbl 3851504 kbl Salinibacter ruber DSM 13855 2-amino-3-ketobutyrate coenzyme A ligase YP_444527.1 522614 R 309807 CDS YP_444528.1 83816099 3850579 complement(523934..524941) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; epimerase/reductase 524941 3850579 SRU_0383 Salinibacter ruber DSM 13855 epimerase/reductase YP_444528.1 523934 R 309807 CDS YP_444529.1 83816297 3852059 525246..525743 1 NC_007677.1 identified by match to protein family HMM PF01037; match to protein family HMM TIGR01199; AsnC family transcriptional regulator 525743 3852059 SRU_0384 Salinibacter ruber DSM 13855 AsnC family transcriptional regulator YP_444529.1 525246 D 309807 CDS YP_444530.1 83815855 3852513 525778..527175 1 NC_007677.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 527175 glnA 3852513 glnA Salinibacter ruber DSM 13855 glutamine synthetase, type I YP_444530.1 525778 D 309807 CDS YP_444531.1 83816671 3852672 527382..528794 1 NC_007677.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; adenylosuccinate lyase 528794 purB 3852672 purB Salinibacter ruber DSM 13855 adenylosuccinate lyase YP_444531.1 527382 D 309807 CDS YP_444532.1 83814254 3852483 529038..530900 1 NC_007677.1 identified by match to protein family HMM PF00723; glycosyl hydrolase family protein 530900 3852483 SRU_0387 Salinibacter ruber DSM 13855 glycosyl hydrolase family protein YP_444532.1 529038 D 309807 CDS YP_444533.1 83814444 3850730 530897..531406 1 NC_007677.1 hypothetical protein 531406 3850730 SRU_0388 Salinibacter ruber DSM 13855 hypothetical protein YP_444533.1 530897 D 309807 CDS YP_444534.1 83814607 3851459 complement(531512..532009) 1 NC_007677.1 hypothetical protein 532009 3851459 SRU_0389 Salinibacter ruber DSM 13855 hypothetical protein YP_444534.1 531512 R 309807 CDS YP_444535.1 83816702 3850819 complement(532088..532435) 1 NC_007677.1 hypothetical protein 532435 3850819 SRU_0390 Salinibacter ruber DSM 13855 hypothetical protein YP_444535.1 532088 R 309807 CDS YP_444536.1 83814802 3852407 532643..533827 1 NC_007677.1 identified by match to protein family HMM PF01244; dipeptidase 533827 3852407 SRU_0391 Salinibacter ruber DSM 13855 dipeptidase YP_444536.1 532643 D 309807 CDS YP_444537.1 83815725 3850632 534054..536237 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 536237 3850632 SRU_0392 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_444537.1 534054 D 309807 CDS YP_444538.1 83814423 3853007 536439..536813 1 NC_007677.1 identified by match to protein family HMM PF00507; NADH-quinone oxidoreductase chain a 536813 3853007 SRU_0393 Salinibacter ruber DSM 13855 NADH-quinone oxidoreductase chain a YP_444538.1 536439 D 309807 CDS YP_444539.1 83814127 3851114 537009..537650 1 NC_007677.1 identified by match to protein family HMM PF01058; match to protein family HMM TIGR01957; NADH-quinone oxidoreductase subunit B 537650 3851114 SRU_0394 Salinibacter ruber DSM 13855 NADH-quinone oxidoreductase subunit B YP_444539.1 537009 D 309807 CDS YP_444540.1 83814916 3850968 537734..538438 1 NC_007677.1 identified by match to protein family HMM PF00329; match to protein family HMM TIGR01961; NADH-quinone oxidoreductase subunit C/D 538438 3850968 SRU_0395 Salinibacter ruber DSM 13855 NADH-quinone oxidoreductase subunit C/D YP_444540.1 537734 D 309807 CDS YP_444541.1 83815676 3851013 538494..539849 1 NC_007677.1 identified by match to protein family HMM PF00346; match to protein family HMM TIGR01962; NADH dehydrogenase I subunit D 539849 nuoD 3851013 nuoD Salinibacter ruber DSM 13855 NADH dehydrogenase I subunit D YP_444541.1 538494 D 309807 CDS YP_444542.1 83816470 3852837 539875..540624 1 NC_007677.1 identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958; NADH-ubiquinone oxidoreductase 24 kDa subunit 540624 3852837 SRU_0397 Salinibacter ruber DSM 13855 NADH-ubiquinone oxidoreductase 24 kDa subunit YP_444542.1 539875 D 309807 CDS YP_444543.1 83814696 3853104 540695..542089 1 NC_007677.1 identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase 51 Kd subunit family protein 542089 3853104 SRU_0398 Salinibacter ruber DSM 13855 respiratory-chain NADH dehydrogenase 51 Kd subunit family protein YP_444543.1 540695 D 309807 CDS YP_444544.1 83815328 3852118 542144..542584 1 NC_007677.1 hypothetical protein 542584 3852118 SRU_0399 Salinibacter ruber DSM 13855 hypothetical protein YP_444544.1 542144 D 309807 CDS YP_444545.1 83814940 3851323 542810..544549 1 NC_007677.1 identified by match to protein family HMM PF00111; NADH dehydrogenase i subunit G 544549 nuoG 3851323 nuoG Salinibacter ruber DSM 13855 NADH dehydrogenase i subunit G YP_444545.1 542810 D 309807 CDS YP_444546.1 83815873 3852531 544752..545135 1 NC_007677.1 hypothetical protein 545135 3852531 SRU_0401 Salinibacter ruber DSM 13855 hypothetical protein YP_444546.1 544752 D 309807 CDS YP_444547.1 83815087 3850497 545229..545879 1 NC_007677.1 hypothetical protein 545879 3850497 SRU_0402 Salinibacter ruber DSM 13855 hypothetical protein YP_444547.1 545229 D 309807 CDS YP_444548.1 83814287 3850356 545996..547699 1 NC_007677.1 identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; NAD(+) synthase 547699 3850356 SRU_0403 Salinibacter ruber DSM 13855 NAD(+) synthase YP_444548.1 545996 D 309807 CDS YP_444549.1 83816309 3851936 547763..548500 1 NC_007677.1 identified by match to protein family HMM PF01252; signal peptidase (SPase) II 548500 lspA 3851936 lspA Salinibacter ruber DSM 13855 signal peptidase (SPase) II YP_444549.1 547763 D 309807 CDS YP_444550.1 83814601 3851081 548658..550472 1 NC_007677.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 550472 lepA 3851081 lepA Salinibacter ruber DSM 13855 GTP-binding protein LepA YP_444550.1 548658 D 309807 CDS YP_444551.1 83815423 3852272 550559..551431 1 NC_007677.1 hypothetical protein 551431 3852272 SRU_0406 Salinibacter ruber DSM 13855 hypothetical protein YP_444551.1 550559 D 309807 CDS YP_444552.1 83814687 3853095 551486..552664 1 NC_007677.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 552664 lepB 3853095 lepB Salinibacter ruber DSM 13855 signal peptidase I YP_444552.1 551486 D 309807 CDS YP_444553.1 83814190 3850867 complement(552728..553705) 1 NC_007677.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 553705 3850867 SRU_0408 Salinibacter ruber DSM 13855 ErfK/YbiS/YcfS/YnhG family protein YP_444553.1 552728 R 309807 CDS YP_444554.1 83816713 3850830 complement(553788..555023) 1 NC_007677.1 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF07885; potassium channel 555023 3850830 SRU_0409 Salinibacter ruber DSM 13855 potassium channel YP_444554.1 553788 R 309807 CDS YP_444555.1 83815939 3850437 complement(555042..555731) 1 NC_007677.1 hypothetical protein 555731 3850437 SRU_0410 Salinibacter ruber DSM 13855 hypothetical protein YP_444555.1 555042 R 309807 CDS YP_444556.1 83814417 3853001 555705..556577 1 NC_007677.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 556577 3853001 SRU_0411 Salinibacter ruber DSM 13855 DoxX subfamily protein YP_444556.1 555705 D 309807 CDS YP_444557.1 83814902 3852351 556706..557878 1 NC_007677.1 identified by match to protein family HMM PF01734; patatin family phospholipase 557878 3852351 SRU_0413 Salinibacter ruber DSM 13855 patatin family phospholipase YP_444557.1 556706 D 309807 CDS YP_444558.1 83815199 3851780 complement(557848..558408) 1 NC_007677.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 558408 folA 3851780 folA Salinibacter ruber DSM 13855 dihydrofolate reductase YP_444558.1 557848 R 309807 CDS YP_444559.1 83815693 3850600 complement(558409..559992) 1 NC_007677.1 identified by match to protein family HMM PF01425; amidase 559992 3850600 SRU_0414 Salinibacter ruber DSM 13855 amidase YP_444559.1 558409 R 309807 CDS YP_444560.1 83814064 3852468 560405..561538 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; transmembrane sensor histidine kinase transcription regulator protein 561538 3852468 SRU_0415 Salinibacter ruber DSM 13855 transmembrane sensor histidine kinase transcription regulator protein YP_444560.1 560405 D 309807 CDS YP_444561.1 83815380 3850892 561614..562354 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; two-component system, regulatory protein 562354 algR 3850892 algR Salinibacter ruber DSM 13855 two-component system, regulatory protein YP_444561.1 561614 D 309807 CDS YP_444562.1 83815972 3852709 562654..565602 1 NC_007677.1 hypothetical protein 565602 3852709 SRU_0417 Salinibacter ruber DSM 13855 hypothetical protein YP_444562.1 562654 D 309807 CDS YP_444563.1 83816477 3852845 565815..566999 1 NC_007677.1 identified by match to protein family HMM PF07396; phosphate-selective porin O and P superfamily protein 566999 3852845 SRU_0418 Salinibacter ruber DSM 13855 phosphate-selective porin O and P superfamily protein YP_444563.1 565815 D 309807 CDS YP_444564.1 83816568 3851912 complement(567015..568082) 1 NC_007677.1 identified by match to protein family HMM PF00303; thymidylate synthase 568082 thyA 3851912 thyA Salinibacter ruber DSM 13855 thymidylate synthase YP_444564.1 567015 R 309807 CDS YP_444565.1 83816526 3852000 568187..568519 1 NC_007677.1 hypothetical protein 568519 3852000 SRU_0420 Salinibacter ruber DSM 13855 hypothetical protein YP_444565.1 568187 D 309807 CDS YP_444566.1 83815524 3852334 complement(568668..569177) 1 NC_007677.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 569177 apaG 3852334 apaG Salinibacter ruber DSM 13855 ApaG protein YP_444566.1 568668 R 309807 CDS YP_444567.1 83814836 3852402 569303..570061 1 NC_007677.1 identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434; phosophoadenylyl-sulfate reductase subfamily protein 570061 cysH 3852402 cysH Salinibacter ruber DSM 13855 phosophoadenylyl-sulfate reductase subfamily protein YP_444567.1 569303 D 309807 CDS YP_444568.1 83815323 3852113 570217..572115 1 NC_007677.1 identified by match to protein family HMM PF01558; match to protein family HMM PF01855; pyruvate synthase 572115 3852113 SRU_0423 Salinibacter ruber DSM 13855 pyruvate synthase YP_444568.1 570217 D 309807 CDS YP_444569.1 83816836 3851147 572268..573632 1 NC_007677.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 573632 3851147 SRU_0424 Salinibacter ruber DSM 13855 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_444569.1 572268 D 309807 CDS YP_444570.1 83815872 3852530 573790..574200 1 NC_007677.1 identified by match to protein family HMM PF07681; DoxD-like family protein 574200 3852530 SRU_0425 Salinibacter ruber DSM 13855 DoxD-like family protein YP_444570.1 573790 D 309807 CDS YP_444571.1 83815045 3852634 574215..574715 1 NC_007677.1 identified by match to protein family HMM PF07681; DoxX subfamily protein 574715 3852634 SRU_0426 Salinibacter ruber DSM 13855 DoxX subfamily protein YP_444571.1 574215 D 309807 CDS YP_444572.1 83814247 3852595 574708..575790 1 NC_007677.1 identified by match to protein family HMM PF01593; amine oxidase, flavin-containing 575790 3852595 SRU_0427 Salinibacter ruber DSM 13855 amine oxidase, flavin-containing YP_444572.1 574708 D 309807 CDS YP_444573.1 83814260 3852489 575996..576592 1 NC_007677.1 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; PfpI family intracellular peptidase 576592 3852489 SRU_0428 Salinibacter ruber DSM 13855 PfpI family intracellular peptidase YP_444573.1 575996 D 309807 CDS YP_444574.1 83816655 3852109 complement(576758..577153) 1 NC_007677.1 hypothetical protein 577153 3852109 SRU_0429 Salinibacter ruber DSM 13855 hypothetical protein YP_444574.1 576758 R 309807 CDS YP_444575.1 83816409 3851749 577125..577325 1 NC_007677.1 hypothetical protein 577325 3851749 SRU_0430 Salinibacter ruber DSM 13855 hypothetical protein YP_444575.1 577125 D 309807 CDS YP_444576.1 83815591 3850772 577551..578648 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 578648 proV 3850772 proV Salinibacter ruber DSM 13855 glycine betaine/L-proline ABC transporter ATP-binding protein YP_444576.1 577551 D 309807 CDS YP_444577.1 83815399 3852974 578719..579597 1 NC_007677.1 identified by match to protein family HMM PF00528; glycine betaine/L-proline transport system permease proW 579597 3852974 SRU_0432 Salinibacter ruber DSM 13855 glycine betaine/L-proline transport system permease proW YP_444577.1 578719 D 309807 CDS YP_444578.1 83814600 3851080 579777..580730 1 NC_007677.1 identified by match to protein family HMM PF04069; ABC transporter substrate-binding protein 580730 3851080 SRU_0433 Salinibacter ruber DSM 13855 ABC transporter substrate-binding protein YP_444578.1 579777 D 309807 CDS YP_444579.1 83814625 3851438 580893..581912 1 NC_007677.1 identified by match to protein family HMM PF04069; glycine betaine ABC transporter glycine betaine-binding protein 581912 3851438 SRU_0434 Salinibacter ruber DSM 13855 glycine betaine ABC transporter glycine betaine-binding protein YP_444579.1 580893 D 309807 CDS YP_444580.1 83816678 3852679 582036..583538 1 NC_007677.1 hypothetical protein 583538 3852679 SRU_0435 Salinibacter ruber DSM 13855 hypothetical protein YP_444580.1 582036 D 309807 CDS YP_444581.1 83815880 3852538 583629..584774 1 NC_007677.1 identified by match to protein family HMM PF04087; match to protein family HMM TIGR00341; hypothetical protein 584774 3852538 SRU_0436 Salinibacter ruber DSM 13855 hypothetical protein YP_444581.1 583629 D 309807 CDS YP_444582.1 83814383 3851254 complement(584811..586052) 1 NC_007677.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily transporter 586052 3851254 SRU_0437 Salinibacter ruber DSM 13855 major facilitator superfamily transporter YP_444582.1 584811 R 309807 CDS YP_444583.1 83814199 3850640 586446..589277 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF05738; match to protein family HMM PF07715; outer membrane protein 589277 3850640 SRU_0438 Salinibacter ruber DSM 13855 outer membrane protein YP_444583.1 586446 D 309807 CDS YP_444584.1 83816377 3851873 589463..591094 1 NC_007677.1 outer membrane lipoprotein 591094 3851873 SRU_0439 Salinibacter ruber DSM 13855 outer membrane lipoprotein YP_444584.1 589463 D 309807 CDS YP_444585.1 83815709 3850616 591270..592451 1 NC_007677.1 hypothetical protein 592451 3850616 SRU_0440 Salinibacter ruber DSM 13855 hypothetical protein YP_444585.1 591270 D 309807 CDS YP_444586.1 83815213 3852294 592566..592811 1 NC_007677.1 hypothetical protein 592811 3852294 SRU_0441 Salinibacter ruber DSM 13855 hypothetical protein YP_444586.1 592566 D 309807 CDS YP_444587.1 83816510 3851984 592811..593596 1 NC_007677.1 identified by match to protein family HMM PF03372; dioxygenase 593596 3851984 SRU_0443 Salinibacter ruber DSM 13855 dioxygenase YP_444587.1 592811 D 309807 CDS YP_444588.1 83814141 3850934 complement(593584..594510) 1 NC_007677.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system protein PhoU 594510 3850934 SRU_0442 Salinibacter ruber DSM 13855 phosphate transport system protein PhoU YP_444588.1 593584 R 309807 CDS YP_444589.1 83816759 3852566 complement(594438..595583) 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 595583 3852566 SRU_0444 Salinibacter ruber DSM 13855 glycoside hydrolase YP_444589.1 594438 R 309807 CDS YP_444590.1 83814917 3850969 complement(595679..597184) 1 NC_007677.1 identified by match to protein family HMM PF00534; sulfolipid synthase 597184 3850969 SRU_0445 Salinibacter ruber DSM 13855 sulfolipid synthase YP_444590.1 595679 R 309807 CDS YP_444591.1 83815155 3850389 complement(597184..599802) 1 NC_007677.1 hypothetical protein 599802 3850389 SRU_0446 Salinibacter ruber DSM 13855 hypothetical protein YP_444591.1 597184 R 309807 CDS YP_444592.1 83814712 3851505 complement(600086..600382) 1 NC_007677.1 hypothetical protein 600382 3851505 SRU_0447 Salinibacter ruber DSM 13855 hypothetical protein YP_444592.1 600086 R 309807 CDS YP_444593.1 83814814 3852419 complement(600450..601148) 1 NC_007677.1 hypothetical protein 601148 3852419 SRU_0448 Salinibacter ruber DSM 13855 hypothetical protein YP_444593.1 600450 R 309807 CDS YP_444594.1 83814370 3851241 complement(601430..604375) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 604375 uvrA 3851241 uvrA Salinibacter ruber DSM 13855 excinuclease ABC subunit A YP_444594.1 601430 R 309807 CDS YP_444595.1 83814397 3851170 604638..605831 1 NC_007677.1 identified by match to protein family HMM PF07995; pyrroloquinoline-quinone glucose dehydrogenase 605831 3851170 SRU_0451 Salinibacter ruber DSM 13855 pyrroloquinoline-quinone glucose dehydrogenase YP_444595.1 604638 D 309807 CDS YP_444596.1 83814979 3851188 complement(605782..606867) 1 NC_007677.1 translation initiation factor IF-2 606867 3851188 SRU_0450 Salinibacter ruber DSM 13855 translation initiation factor IF-2 YP_444596.1 605782 R 309807 CDS YP_444597.1 83815465 3853059 complement(606864..608000) 1 NC_007677.1 identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 608000 3853059 SRU_0452 Salinibacter ruber DSM 13855 M23 peptidase domain-containing protein YP_444597.1 606864 R 309807 CDS YP_444598.1 83815464 3853058 608027..608647 1 NC_007677.1 hypothetical protein 608647 3853058 SRU_0453 Salinibacter ruber DSM 13855 hypothetical protein YP_444598.1 608027 D 309807 CDS YP_444599.1 83814697 3853105 608693..609934 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; carboxypeptidase G2 609934 3853105 SRU_0454 Salinibacter ruber DSM 13855 carboxypeptidase G2 YP_444599.1 608693 D 309807 CDS YP_444600.1 83816818 3851128 609984..611030 1 NC_007677.1 hypothetical protein 611030 3851128 SRU_0455 Salinibacter ruber DSM 13855 hypothetical protein YP_444600.1 609984 D 309807 CDS YP_444601.1 83815822 3851628 611236..614478 1 NC_007677.1 identified by match to protein family HMM PF00133; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 614478 ileS 3851628 ileS Salinibacter ruber DSM 13855 isoleucyl-tRNA synthetase YP_444601.1 611236 D 309807 CDS YP_444602.1 83816084 3850564 614557..615033 1 NC_007677.1 RNA polymerase-binding protein DksA 615033 3850564 SRU_0457 Salinibacter ruber DSM 13855 RNA polymerase-binding protein DksA YP_444602.1 614557 D 309807 CDS YP_444603.1 83816675 3852676 615198..615806 1 NC_007677.1 identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 615806 ruvA 3852676 ruvA Salinibacter ruber DSM 13855 Holliday junction DNA helicase RuvA YP_444603.1 615198 D 309807 CDS YP_444604.1 83815558 3852231 615844..616821 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 616821 prsA 3852231 prsA Salinibacter ruber DSM 13855 ribose-phosphate pyrophosphokinase YP_444604.1 615844 D 309807 CDS YP_444605.1 83816187 3851566 complement(617006..617587) 1 NC_007677.1 hypothetical protein 617587 3851566 SRU_0460 Salinibacter ruber DSM 13855 hypothetical protein YP_444605.1 617006 R 309807 CDS YP_444606.1 83815384 3850896 617656..618219 1 NC_007677.1 deoxycytidine triphosphate deaminase 618219 3850896 SRU_0461 Salinibacter ruber DSM 13855 deoxycytidine triphosphate deaminase YP_444606.1 617656 D 309807 CDS YP_444607.1 83816661 3852662 618307..619104 1 NC_007677.1 identified by similarity to SP:O34403; match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 619104 mutM 3852662 mutM Salinibacter ruber DSM 13855 formamidopyrimidine-DNA glycosylase YP_444607.1 618307 D 309807 CDS YP_444608.1 83814276 3850345 619169..619909 1 NC_007677.1 identified by match to protein family HMM PF01904; hypothetical protein 619909 3850345 SRU_0463 Salinibacter ruber DSM 13855 hypothetical protein YP_444608.1 619169 D 309807 CDS YP_444609.1 83815055 3851284 619952..620977 1 NC_007677.1 identified by match to protein family HMM PF03969; ATPase 620977 3851284 SRU_0464 Salinibacter ruber DSM 13855 ATPase YP_444609.1 619952 D 309807 CDS YP_444610.1 83815499 3852309 621390..623312 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; GTP-binding protein TypA 623312 typA 3852309 typA Salinibacter ruber DSM 13855 GTP-binding protein TypA YP_444610.1 621390 D 309807 CDS YP_444611.1 83814765 3851695 complement(623361..623936) 1 NC_007677.1 hypothetical protein 623936 3851695 SRU_0466 Salinibacter ruber DSM 13855 hypothetical protein YP_444611.1 623361 R 309807 CDS YP_444612.1 83815761 3852769 complement(624396..625394) 1 NC_007677.1 identified by match to protein family HMM PF00226; match to protein family HMM PF01556; dnaJ protein 625394 dnaJ 3852769 dnaJ Salinibacter ruber DSM 13855 dnaJ protein YP_444612.1 624396 R 309807 CDS YP_444613.1 83814987 3851196 625491..627011 1 NC_007677.1 identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 627011 accC 3851196 accC Salinibacter ruber DSM 13855 acetyl-CoA carboxylase, biotin carboxylase YP_444613.1 625491 D 309807 CDS YP_444614.1 83814376 3851247 complement(628448..629473) 1 NC_007677.1 hypothetical protein 629473 3851247 SRU_0469 Salinibacter ruber DSM 13855 hypothetical protein YP_444614.1 628448 R 309807 CDS YP_444615.1 83816271 3852033 complement(630413..636421) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory histidine protein kinase 636421 3852033 SRU_0470 Salinibacter ruber DSM 13855 sensory histidine protein kinase YP_444615.1 630413 R 309807 CDS YP_444616.1 83815602 3850783 complement(636458..636832) 1 NC_007677.1 hypothetical protein 636832 3850783 SRU_0471 Salinibacter ruber DSM 13855 hypothetical protein YP_444616.1 636458 R 309807 CDS YP_444617.1 83815852 3852510 complement(638191..640398) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; HTR-like protein 640398 3852510 SRU_0472 Salinibacter ruber DSM 13855 HTR-like protein YP_444617.1 638191 R 309807 CDS YP_444618.1 83815443 3850740 complement(640562..643777) 1 NC_007677.1 identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family multidrug efflux protein 643777 3850740 SRU_0473 Salinibacter ruber DSM 13855 AcrB/AcrD/AcrF family multidrug efflux protein YP_444618.1 640562 R 309807 CDS YP_444619.1 83814241 3852589 complement(643774..644307) 1 NC_007677.1 hypothetical protein 644307 3852589 SRU_0474 Salinibacter ruber DSM 13855 hypothetical protein YP_444619.1 643774 R 309807 CDS YP_444620.1 83816683 3852684 complement(644373..645557) 1 NC_007677.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 645557 3852684 SRU_0475 Salinibacter ruber DSM 13855 RND family efflux transporter MFP subunit YP_444620.1 644373 R 309807 CDS YP_444621.1 83814367 3851355 complement(645682..647130) 1 NC_007677.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane efflux protein 647130 3851355 SRU_0476 Salinibacter ruber DSM 13855 outer membrane efflux protein YP_444621.1 645682 R 309807 CDS YP_444622.1 83816615 3853145 complement(647213..648127) 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 648127 3853145 SRU_0477 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_444622.1 647213 R 309807 CDS YP_444623.1 83816815 3851125 648194..648682 1 NC_007677.1 identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 648682 3851125 SRU_0478 Salinibacter ruber DSM 13855 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_444623.1 648194 D 309807 CDS YP_444624.1 83815751 3852759 649032..650444 1 NC_007677.1 identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; O-acetylhomoserine sulfhydrylase 650444 cysD 3852759 cysD Salinibacter ruber DSM 13855 O-acetylhomoserine sulfhydrylase YP_444624.1 649032 D 309807 CDS YP_444625.1 83814786 3850878 650575..651633 1 NC_007677.1 identified by similarity to SP:P45131; match to protein family HMM PF00561; match to protein family HMM TIGR01392; homoserine O-acetyltransferase 651633 metX 3850878 metX Salinibacter ruber DSM 13855 homoserine O-acetyltransferase YP_444625.1 650575 D 309807 CDS YP_444626.1 83815171 3850366 651765..652718 1 NC_007677.1 identified by match to protein family HMM PF00696; aspartate kinase 652718 lysC 3850366 lysC Salinibacter ruber DSM 13855 aspartate kinase YP_444626.1 651765 D 309807 CDS YP_444627.1 83814544 3850792 652742..653866 1 NC_007677.1 identified by match to protein family HMM PF00742; match to protein family HMM PF03447; bifunctional aspartokinase/homoserine dehydrogenase I 653866 3850792 SRU_0482 Salinibacter ruber DSM 13855 bifunctional aspartokinase/homoserine dehydrogenase I YP_444627.1 652742 D 309807 CDS YP_444628.1 83816760 3852567 complement(654039..658079) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; histidine kinase DhkJ 658079 3852567 SRU_0483 Salinibacter ruber DSM 13855 histidine kinase DhkJ YP_444628.1 654039 R 309807 CDS YP_444629.1 83816118 3850520 complement(658694..659425) 1 NC_007677.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 659425 sdhB 3850520 sdhB Salinibacter ruber DSM 13855 succinate dehydrogenase iron-sulfur subunit YP_444629.1 658694 R 309807 CDS YP_444630.1 83814832 3852398 complement(659512..661347) 1 NC_007677.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 661347 sdhA 3852398 sdhA Salinibacter ruber DSM 13855 succinate dehydrogenase flavoprotein subunit YP_444630.1 659512 R 309807 CDS YP_444631.1 83814218 3850463 complement(661371..661823) 1 NC_007677.1 succinate dehydrogenase, membrane subunit 661823 3850463 SRU_0486 Salinibacter ruber DSM 13855 succinate dehydrogenase, membrane subunit YP_444631.1 661371 R 309807 CDS YP_444632.1 83815294 3850960 complement(661876..662370) 1 NC_007677.1 identified by match to protein family HMM PF01127; succinate dehydrogenase membrane subunit 662370 3850960 SRU_0487 Salinibacter ruber DSM 13855 succinate dehydrogenase membrane subunit YP_444632.1 661876 R 309807 CDS YP_444633.1 83816245 3852908 complement(662502..663857) 1 NC_007677.1 identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; citrate synthase 663857 citA 3852908 citA Salinibacter ruber DSM 13855 citrate synthase YP_444633.1 662502 R 309807 CDS YP_444634.1 83814929 3850981 664474..666264 1 NC_007677.1 identified by match to protein family HMM TIGR00757; ribonuclease 666264 3850981 SRU_0489 Salinibacter ruber DSM 13855 ribonuclease YP_444634.1 664474 D 309807 CDS YP_444635.1 83815523 3852333 666347..666631 1 NC_007677.1 hypothetical protein 666631 3852333 SRU_0490 Salinibacter ruber DSM 13855 hypothetical protein YP_444635.1 666347 D 309807 CDS YP_444636.1 83816562 3851906 666621..667496 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 667496 3851906 SRU_0491 Salinibacter ruber DSM 13855 metallo-beta-lactamase superfamily protein YP_444636.1 666621 D 309807 CDS YP_444637.1 83814273 3850342 667561..667989 1 NC_007677.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 667989 aroQ 3850342 aroQ Salinibacter ruber DSM 13855 3-dehydroquinate dehydratase YP_444637.1 667561 D 309807 CDS YP_444638.1 83815941 3850439 668158..668634 1 NC_007677.1 identified by match to protein family HMM PF04307; metal-dependent hydrolase 668634 3850439 SRU_0493 Salinibacter ruber DSM 13855 metal-dependent hydrolase YP_444638.1 668158 D 309807 CDS YP_444639.1 83816605 3853135 668733..670430 1 NC_007677.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 670430 mviN 3853135 mviN Salinibacter ruber DSM 13855 integral membrane protein MviN YP_444639.1 668733 D 309807 CDS YP_444640.1 83814706 3851499 670568..671134 1 NC_007677.1 identified by match to protein family HMM PF02622; hypothetical protein 671134 3851499 SRU_0495 Salinibacter ruber DSM 13855 hypothetical protein YP_444640.1 670568 D 309807 CDS YP_444641.1 83815968 3852705 671446..672054 1 NC_007677.1 identified by match to protein family HMM PF00037; NADH dehydrogenase i, i subunit 672054 nuoI 3852705 nuoI Salinibacter ruber DSM 13855 NADH dehydrogenase i, i subunit YP_444641.1 671446 D 309807 CDS YP_444642.1 83814637 3851450 672239..672724 1 NC_007677.1 hypothetical protein 672724 3851450 SRU_0497 Salinibacter ruber DSM 13855 hypothetical protein YP_444642.1 672239 D 309807 CDS YP_444643.1 83815422 3852271 672803..673846 1 NC_007677.1 identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 673846 holA 3852271 holA Salinibacter ruber DSM 13855 DNA polymerase III subunit delta YP_444643.1 672803 D 309807 CDS YP_444644.1 83815864 3852522 674024..674740 1 NC_007677.1 hypothetical protein 674740 3852522 SRU_0499 Salinibacter ruber DSM 13855 hypothetical protein YP_444644.1 674024 D 309807 CDS YP_444645.1 83816701 3850818 675099..675659 1 NC_007677.1 hypothetical protein 675659 3850818 SRU_0501 Salinibacter ruber DSM 13855 hypothetical protein YP_444645.1 675099 D 309807 CDS YP_444646.1 83814992 3853031 675722..676126 1 NC_007677.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 676126 3853031 SRU_0502 Salinibacter ruber DSM 13855 low molecular weight protein-tyrosine-phosphatase YP_444646.1 675722 D 309807 CDS YP_444647.1 83815767 3852150 complement(676215..676682) 1 NC_007677.1 hypothetical protein 676682 3852150 SRU_0503 Salinibacter ruber DSM 13855 hypothetical protein YP_444647.1 676215 R 309807 CDS YP_444648.1 83816316 3851943 complement(676772..677710) 1 NC_007677.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase 677710 3851943 SRU_0504 Salinibacter ruber DSM 13855 RNA methyltransferase YP_444648.1 676772 R 309807 CDS YP_444649.1 83814158 3850481 677767..679071 1 NC_007677.1 identified by similarity to SP:P96110; match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase 679071 gdhA 3850481 gdhA Salinibacter ruber DSM 13855 glutamate dehydrogenase YP_444649.1 677767 D 309807 CDS YP_444650.1 83815504 3852314 679068..681128 1 NC_007677.1 hypothetical protein 681128 3852314 SRU_0507 Salinibacter ruber DSM 13855 hypothetical protein YP_444650.1 679068 D 309807 CDS YP_444651.1 83816403 3851743 681176..682804 1 NC_007677.1 identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; sugar kinase 682804 3851743 SRU_0508 Salinibacter ruber DSM 13855 sugar kinase YP_444651.1 681176 D 309807 CDS YP_444652.1 83815484 3853078 682856..683269 1 NC_007677.1 hypothetical protein 683269 3853078 SRU_0509 Salinibacter ruber DSM 13855 hypothetical protein YP_444652.1 682856 D 309807 CDS YP_444653.1 83816095 3850575 683629..684123 1 NC_007677.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB 684123 3850575 SRU_0510 Salinibacter ruber DSM 13855 TonB YP_444653.1 683629 D 309807 CDS YP_444654.1 83815292 3850958 complement(684234..685058) 1 NC_007677.1 identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 685058 rpiA 3850958 rpiA Salinibacter ruber DSM 13855 ribose 5-phosphate isomerase A YP_444654.1 684234 R 309807 CDS YP_444655.1 83814443 3850729 complement(685033..685443) 1 NC_007677.1 hypothetical protein 685443 3850729 SRU_0512 Salinibacter ruber DSM 13855 hypothetical protein YP_444655.1 685033 R 309807 CDS YP_444656.1 83816462 3852829 complement(685564..687702) 1 NC_007677.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase 687702 uvrd 3852829 uvrd Salinibacter ruber DSM 13855 ATP-dependent DNA helicase YP_444656.1 685564 R 309807 CDS YP_444657.1 83815700 3850607 688018..688938 1 NC_007677.1 identified by match to protein family HMM PF01656; SpoOJ regulator protein 688938 soj 3850607 soj Salinibacter ruber DSM 13855 SpoOJ regulator protein YP_444657.1 688018 D 309807 CDS YP_444658.1 83814927 3850979 689005..689985 1 NC_007677.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; spoOJ protein 689985 spo0J 3850979 spo0J Salinibacter ruber DSM 13855 spoOJ protein YP_444658.1 689005 D 309807 CDS YP_444659.1 83814081 3850404 690103..690813 1 NC_007677.1 hypothetical protein 690813 3850404 SRU_0516 Salinibacter ruber DSM 13855 hypothetical protein YP_444659.1 690103 D 309807 CDS YP_444660.1 83814329 3851532 691144..692457 1 NC_007677.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00202; 8-amino-7-oxononanoate synthase 692457 bioF 3851532 bioF Salinibacter ruber DSM 13855 8-amino-7-oxononanoate synthase YP_444660.1 691144 D 309807 CDS YP_444661.1 83816201 3851814 692491..693741 1 NC_007677.1 hypothetical protein 693741 3851814 SRU_0518 Salinibacter ruber DSM 13855 hypothetical protein YP_444661.1 692491 D 309807 CDS YP_444662.1 83815579 3850760 693806..694504 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; haloacid dehalogenase-like hydrolase 694504 3850760 SRU_0519 Salinibacter ruber DSM 13855 haloacid dehalogenase-like hydrolase YP_444662.1 693806 D 309807 CDS YP_444663.1 83814935 3851318 complement(694506..695198) 1 NC_007677.1 identified by match to protein family HMM PF01694; integral membrane protein 695198 3851318 SRU_0520 Salinibacter ruber DSM 13855 integral membrane protein YP_444663.1 694506 R 309807 CDS YP_444664.1 83814316 3851519 complement(695287..695994) 1 NC_007677.1 identified by match to protein family HMM PF07685; match to protein family HMM TIGR01737; phosphoribosylformylglycinamidine synthase I 695994 purQ 3851519 purQ Salinibacter ruber DSM 13855 phosphoribosylformylglycinamidine synthase I YP_444664.1 695287 R 309807 CDS YP_444665.1 83815895 3851585 complement(696091..697626) 1 NC_007677.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; very long chain acyl-CoA dehydrogenase-related protein 697626 3851585 SRU_0522 Salinibacter ruber DSM 13855 very long chain acyl-CoA dehydrogenase-related protein YP_444665.1 696091 R 309807 CDS YP_444666.1 83815390 3850902 complement(697955..698461) 1 NC_007677.1 identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 698461 ssb 3850902 ssb Salinibacter ruber DSM 13855 single-strand binding protein YP_444666.1 697955 R 309807 CDS YP_444667.1 83814596 3851076 complement(698978..699793) 1 NC_007677.1 identified by match to protein family HMM PF00561; beta-D-galactosidase 699793 3851076 SRU_0524 Salinibacter ruber DSM 13855 beta-D-galactosidase YP_444667.1 698978 R 309807 CDS YP_444668.1 83816291 3852053 700295..700600 1 NC_007677.1 hypothetical protein 700600 3852053 SRU_0525 Salinibacter ruber DSM 13855 hypothetical protein YP_444668.1 700295 D 309807 CDS YP_444669.1 83815459 3853053 700681..701505 1 NC_007677.1 hypothetical protein 701505 3853053 SRU_0526 Salinibacter ruber DSM 13855 hypothetical protein YP_444669.1 700681 D 309807 CDS YP_444670.1 83815450 3850747 701565..702236 1 NC_007677.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 702236 udk 3850747 udk Salinibacter ruber DSM 13855 uridine kinase YP_444670.1 701565 D 309807 CDS YP_444671.1 83814803 3852408 complement(702266..703036) 1 NC_007677.1 identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; transcriptional regulator 703036 3852408 SRU_0528 Salinibacter ruber DSM 13855 transcriptional regulator YP_444671.1 702266 R 309807 CDS YP_444672.1 83815554 3852227 complement(703064..703861) 1 NC_007677.1 identified by similarity to SP:P42975; match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 703861 3852227 SRU_0529 Salinibacter ruber DSM 13855 biotin--acetyl-CoA-carboxylase ligase YP_444672.1 703064 R 309807 CDS YP_444673.1 83816029 3851681 complement(703925..704761) 1 NC_007677.1 hypothetical protein 704761 3851681 SRU_0530 Salinibacter ruber DSM 13855 hypothetical protein YP_444673.1 703925 R 309807 CDS YP_444674.1 83816800 3851228 704901..705734 1 NC_007677.1 identified by match to protein family HMM PF00459; inositol-1-monophosphatase 705734 3851228 SRU_0531 Salinibacter ruber DSM 13855 inositol-1-monophosphatase YP_444674.1 704901 D 309807 CDS YP_444675.1 83815231 3851032 705791..706627 1 NC_007677.1 enoyl-(acyl-carrier-protein) reductase 706627 fabI 3851032 fabI Salinibacter ruber DSM 13855 enoyl-(acyl-carrier-protein) reductase YP_444675.1 705791 D 309807 CDS YP_444676.1 83815806 3851612 706637..707425 1 NC_007677.1 identified by match to protein family HMM PF00702; phosphoglycolate phosphatase 707425 3851612 SRU_0533 Salinibacter ruber DSM 13855 phosphoglycolate phosphatase YP_444676.1 706637 D 309807 CDS YP_444677.1 83816729 3850846 707401..708315 1 NC_007677.1 hypothetical protein 708315 3850846 SRU_0534 Salinibacter ruber DSM 13855 hypothetical protein YP_444677.1 707401 D 309807 CDS YP_444678.1 83814511 3852448 708611..709174 1 NC_007677.1 hypothetical protein 709174 3852448 SRU_0535 Salinibacter ruber DSM 13855 hypothetical protein YP_444678.1 708611 D 309807 CDS YP_444679.1 83815606 3850787 complement(709318..710628) 1 NC_007677.1 identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; NupC family protein 710628 3850787 SRU_0536 Salinibacter ruber DSM 13855 NupC family protein YP_444679.1 709318 R 309807 CDS YP_444680.1 83816602 3853132 complement(710822..712852) 1 NC_007677.1 peptidase 712852 3853132 SRU_0537 Salinibacter ruber DSM 13855 peptidase YP_444680.1 710822 R 309807 CDS YP_444681.1 83816263 3852926 713066..715426 1 NC_007677.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase pcrA 715426 3852926 SRU_0538 Salinibacter ruber DSM 13855 ATP-dependent DNA helicase pcrA YP_444681.1 713066 D 309807 CDS YP_444682.1 83815636 3850699 complement(715461..715973) 1 NC_007677.1 identified by match to protein family HMM TIGR02246; hypothetical protein 715973 3850699 SRU_0539 Salinibacter ruber DSM 13855 hypothetical protein YP_444682.1 715461 R 309807 CDS YP_444683.1 83814972 3851181 complement(716033..716851) 1 NC_007677.1 HNH endonuclease family protein 716851 3851181 SRU_0540 Salinibacter ruber DSM 13855 HNH endonuclease family protein YP_444683.1 716033 R 309807 CDS YP_444684.1 83814351 3851339 complement(717083..717982) 1 NC_007677.1 hypothetical protein 717982 3851339 SRU_0541 Salinibacter ruber DSM 13855 hypothetical protein YP_444684.1 717083 R 309807 CDS YP_444685.1 83814341 3851388 complement(718212..719051) 1 NC_007677.1 identified by match to protein family HMM PF01063; aminotransferase 719051 3851388 SRU_0542 Salinibacter ruber DSM 13855 aminotransferase YP_444685.1 718212 R 309807 CDS YP_444686.1 83815849 3852507 719136..719660 1 NC_007677.1 hypothetical protein 719660 3852507 SRU_0543 Salinibacter ruber DSM 13855 hypothetical protein YP_444686.1 719136 D 309807 CDS YP_444687.1 83815282 3850948 complement(719798..720445) 1 NC_007677.1 identified by match to protein family HMM PF01243; match to protein family HMM TIGR00558; pyridoxamine 5'-phosphate oxidase 720445 pdxH 3850948 pdxH Salinibacter ruber DSM 13855 pyridoxamine 5'-phosphate oxidase YP_444687.1 719798 R 309807 CDS YP_444688.1 83814565 3852954 complement(720572..721405) 1 NC_007677.1 hypothetical protein 721405 3852954 SRU_0545 Salinibacter ruber DSM 13855 hypothetical protein YP_444688.1 720572 R 309807 CDS YP_444689.1 83814733 3851487 721429..722289 1 NC_007677.1 identified by match to protein family HMM PF01619; proline dehydrogenase superfamily protein 722289 3851487 SRU_0546 Salinibacter ruber DSM 13855 proline dehydrogenase superfamily protein YP_444689.1 721429 D 309807 CDS YP_444690.1 83815204 3852285 complement(722409..722945) 1 NC_007677.1 identified by match to protein family HMM PF01661; Appr-1-p processing enzyme family protein 722945 3852285 SRU_0547 Salinibacter ruber DSM 13855 Appr-1-p processing enzyme family protein YP_444690.1 722409 R 309807 CDS YP_444691.1 83815640 3850703 723096..723953 1 NC_007677.1 hypothetical protein 723953 3850703 SRU_0548 Salinibacter ruber DSM 13855 hypothetical protein YP_444691.1 723096 D 309807 CDS YP_444692.1 83815901 3851591 723980..724603 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 724603 3851591 SRU_0549 Salinibacter ruber DSM 13855 hypothetical protein YP_444692.1 723980 D 309807 CDS YP_444693.1 83816692 3852693 724839..726536 1 NC_007677.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 726536 pyrG 3852693 pyrG Salinibacter ruber DSM 13855 CTP synthetase YP_444693.1 724839 D 309807 CDS YP_444694.1 83814648 3851422 complement(726717..727733) 1 NC_007677.1 identified by match to protein family HMM PF01726; match to protein family HMM TIGR00498; LexA repressor 727733 3851422 SRU_0551 Salinibacter ruber DSM 13855 LexA repressor YP_444694.1 726717 R 309807 CDS YP_444695.1 83816078 3850558 727703..728179 1 NC_007677.1 identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; mraZ protein 728179 mraZ 3850558 mraZ Salinibacter ruber DSM 13855 mraZ protein YP_444695.1 727703 D 309807 CDS YP_444696.1 83816833 3851143 728212..729222 1 NC_007677.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 729222 mraW 3851143 mraW Salinibacter ruber DSM 13855 S-adenosyl-methyltransferase MraW YP_444696.1 728212 D 309807 CDS YP_444697.1 83814169 3850492 729263..729760 1 NC_007677.1 hypothetical protein 729760 3850492 SRU_0554 Salinibacter ruber DSM 13855 hypothetical protein YP_444697.1 729263 D 309807 CDS YP_444698.1 83814962 3851268 729827..731773 1 NC_007677.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 3 731773 3851268 SRU_0555 Salinibacter ruber DSM 13855 penicillin-binding protein 3 YP_444698.1 729827 D 309807 CDS YP_444699.1 83814974 3851183 731748..733316 1 NC_007677.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01085; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 733316 murE 3851183 murE Salinibacter ruber DSM 13855 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_444699.1 731748 D 309807 CDS YP_444700.1 83814435 3850721 733374..734531 1 NC_007677.1 identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 734531 mraY 3850721 mraY Salinibacter ruber DSM 13855 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_444700.1 733374 D 309807 CDS YP_444701.1 83814772 3851702 734603..735985 1 NC_007677.1 identified by match to protein family HMM PF02875; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase 735985 murD 3851702 murD Salinibacter ruber DSM 13855 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_444701.1 734603 D 309807 CDS YP_444702.1 83814197 3850638 736130..737269 1 NC_007677.1 identified by match to protein family HMM PF01098; cell division protein FtsW 737269 3850638 SRU_0559 Salinibacter ruber DSM 13855 cell division protein FtsW YP_444702.1 736130 D 309807 CDS YP_444703.1 83816745 3852552 737331..738443 1 NC_007677.1 identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 738443 murG 3852552 murG Salinibacter ruber DSM 13855 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_444703.1 737331 D 309807 CDS YP_444704.1 83816151 3850553 738524..739951 1 NC_007677.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 739951 murC 3850553 murC Salinibacter ruber DSM 13855 UDP-N-acetylmuramate--L-alanine ligase YP_444704.1 738524 D 309807 CDS YP_444705.1 83814741 3851359 740099..740878 1 NC_007677.1 ftsQ protein 740878 3851359 SRU_0562 Salinibacter ruber DSM 13855 ftsQ protein YP_444705.1 740099 D 309807 CDS YP_444706.1 83816584 3853114 740991..742268 1 NC_007677.1 identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 742268 ftsA 3853114 ftsA Salinibacter ruber DSM 13855 cell division protein FtsA YP_444706.1 740991 D 309807 CDS YP_444707.1 83816382 3851878 742476..743795 1 NC_007677.1 identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 743795 ftsZ 3851878 ftsZ Salinibacter ruber DSM 13855 cell division protein FtsZ YP_444707.1 742476 D 309807 CDS YP_444708.1 83815746 3852754 complement(744291..745985) 1 NC_007677.1 identified by match to protein family HMM PF00082; Serine protease / subtilase peptidase 745985 3852754 SRU_0565 Salinibacter ruber DSM 13855 Serine protease / subtilase peptidase YP_444708.1 744291 R 309807 CDS YP_444709.1 83815336 3852126 complement(746024..746752) 1 NC_007677.1 hypothetical protein 746752 3852126 SRU_0566 Salinibacter ruber DSM 13855 hypothetical protein YP_444709.1 746024 R 309807 CDS YP_444710.1 83814262 3852491 747297..748367 1 NC_007677.1 identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase 748367 manC 3852491 manC Salinibacter ruber DSM 13855 mannose-1-phosphate guanylyltransferase YP_444710.1 747297 D 309807 CDS YP_444711.1 83814825 3852391 complement(748434..749201) 1 NC_007677.1 identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; trehalose-phosphatase 749201 otsB 3852391 otsB Salinibacter ruber DSM 13855 trehalose-phosphatase YP_444711.1 748434 R 309807 CDS YP_444712.1 83814165 3850488 complement(749279..750865) 1 NC_007677.1 identified by match to protein family HMM PF00982; trehalose-6-phosphate synthase domain-containing protein 750865 3850488 SRU_0569 Salinibacter ruber DSM 13855 trehalose-6-phosphate synthase domain-containing protein YP_444712.1 749279 R 309807 CDS YP_444713.1 83816435 3852802 complement(750862..751182) 1 NC_007677.1 hypothetical protein 751182 3852802 SRU_0570 Salinibacter ruber DSM 13855 hypothetical protein YP_444713.1 750862 R 309807 CDS YP_444714.1 83815805 3851611 complement(751241..752197) 1 NC_007677.1 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 752197 glpQ 3851611 glpQ Salinibacter ruber DSM 13855 glycerophosphoryl diester phosphodiesterase YP_444714.1 751241 R 309807 CDS YP_444715.1 83815142 3852949 complement(752210..754534) 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF00930; dipeptidyl peptidase IV (DPP IV) 754534 3852949 SRU_0572 Salinibacter ruber DSM 13855 dipeptidyl peptidase IV (DPP IV) YP_444715.1 752210 R 309807 CDS YP_444716.1 83816434 3852801 754644..755996 1 NC_007677.1 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 755996 alr 3852801 alr Salinibacter ruber DSM 13855 alanine racemase YP_444716.1 754644 D 309807 CDS YP_444717.1 83816732 3850849 756163..756876 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 756876 drrA 3850849 drrA Salinibacter ruber DSM 13855 response regulator DrrA YP_444717.1 756163 D 309807 CDS YP_444718.1 83816112 3850592 757100..758404 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; phosphate regulon sensor protein phoR 758404 3850592 SRU_0575 Salinibacter ruber DSM 13855 phosphate regulon sensor protein phoR YP_444718.1 757100 D 309807 CDS YP_444719.1 83816020 3851672 758831..760933 1 NC_007677.1 identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta 760933 3851672 SRU_0576 Salinibacter ruber DSM 13855 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta YP_444719.1 758831 D 309807 CDS YP_444720.1 83815485 3853079 complement(760949..761710) 1 NC_007677.1 hypothetical protein 761710 3853079 SRU_0577 Salinibacter ruber DSM 13855 hypothetical protein YP_444720.1 760949 R 309807 CDS YP_444721.1 83815347 3853193 complement(762315..762419) 1 NC_007677.1 hypothetical protein 762419 3853193 SRU_0578 Salinibacter ruber DSM 13855 hypothetical protein YP_444721.1 762315 R 309807 CDS YP_444722.1 83815169 3850364 763329..763508 1 NC_007677.1 hypothetical protein 763508 3850364 SRU_0579 Salinibacter ruber DSM 13855 hypothetical protein YP_444722.1 763329 D 309807 CDS YP_444723.1 83815072 3852367 764276..765181 1 NC_007677.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 765181 cysD 3852367 cysD Salinibacter ruber DSM 13855 sulfate adenylyltransferase subunit 2 YP_444723.1 764276 D 309807 CDS YP_444724.1 83814525 3852600 765391..767310 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF01583; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00455; match to protein family HMM TIGR02034; sulfate adenylyltransferase large subunit 767310 3852600 SRU_0581 Salinibacter ruber DSM 13855 sulfate adenylyltransferase large subunit YP_444724.1 765391 D 309807 CDS YP_444725.1 83816781 3851209 767367..767855 1 NC_007677.1 nucleotidyltransferase 767855 3851209 SRU_0582 Salinibacter ruber DSM 13855 nucleotidyltransferase YP_444725.1 767367 D 309807 CDS YP_444726.1 83814854 3852791 767863..768261 1 NC_007677.1 identified by match to protein family HMM PF01934; hypothetical protein 768261 3852791 SRU_0583 Salinibacter ruber DSM 13855 hypothetical protein YP_444726.1 767863 D 309807 CDS YP_444727.1 83814205 3850646 768344..770179 1 NC_007677.1 identified by match to protein family HMM PF02080; sodium/sulfate symporter family protein 770179 3850646 SRU_0584 Salinibacter ruber DSM 13855 sodium/sulfate symporter family protein YP_444727.1 768344 D 309807 CDS YP_444728.1 83816747 3852554 770288..770650 1 NC_007677.1 hypothetical protein 770650 3852554 SRU_0585 Salinibacter ruber DSM 13855 hypothetical protein YP_444728.1 770288 D 309807 CDS YP_444729.1 83816132 3850534 771168..771506 1 NC_007677.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 771506 3850534 SRU_0586 Salinibacter ruber DSM 13855 nucleotidyltransferase domain-containing protein YP_444729.1 771168 D 309807 CDS YP_444730.1 83814969 3851275 771454..771894 1 NC_007677.1 identified by match to protein family HMM PF05168; HEPN domain-containing protein 771894 3851275 SRU_0587 Salinibacter ruber DSM 13855 HEPN domain-containing protein YP_444730.1 771454 D 309807 CDS YP_444731.1 83814173 3850496 771918..772946 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 772946 rfbB 3850496 rfbB Salinibacter ruber DSM 13855 dTDP-glucose 4,6-dehydratase YP_444731.1 771918 D 309807 CDS YP_444732.1 83815553 3852226 773169..774101 1 NC_007677.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 774101 rfbA 3852226 rfbA Salinibacter ruber DSM 13855 glucose-1-phosphate thymidylyltransferase YP_444732.1 773169 D 309807 CDS YP_444733.1 83814948 3851331 774130..774690 1 NC_007677.1 identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 774690 rfbC 3851331 rfbC Salinibacter ruber DSM 13855 dTDP-4-dehydrorhamnose 3,5-epimerase YP_444733.1 774130 D 309807 CDS YP_444734.1 83814384 3851255 774703..775611 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase 775611 rfbD 3851255 rfbD Salinibacter ruber DSM 13855 dTDP-4-dehydrorhamnose reductase YP_444734.1 774703 D 309807 CDS YP_444735.1 83814524 3852461 775936..778890 1 NC_007677.1 identified by match to protein family HMM PF02563; capsule polysaccharide export system periplasmic protein 778890 3852461 SRU_0592 Salinibacter ruber DSM 13855 capsule polysaccharide export system periplasmic protein YP_444735.1 775936 D 309807 CDS YP_444736.1 83816741 3852548 complement(779468..779569) 1 NC_007677.1 hypothetical protein 779569 3852548 SRU_0593 Salinibacter ruber DSM 13855 hypothetical protein YP_444736.1 779468 R 309807 CDS YP_444737.1 83816223 3851836 781369..782676 1 NC_007677.1 identified by match to protein family HMM PF02706; chain length determinant protein 782676 3851836 SRU_0594 Salinibacter ruber DSM 13855 chain length determinant protein YP_444737.1 781369 D 309807 CDS YP_444738.1 83815635 3850698 782822..784225 1 NC_007677.1 identified by match to protein family HMM PF00589; phage integrase family protein 784225 3850698 SRU_0595 Salinibacter ruber DSM 13855 phage integrase family protein YP_444738.1 782822 D 309807 CDS YP_444739.1 83815373 3850669 784284..785603 1 NC_007677.1 identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03721; UDP-glucose dehydrogenase 785603 3850669 SRU_0596 Salinibacter ruber DSM 13855 UDP-glucose dehydrogenase YP_444739.1 784284 D 309807 CDS YP_444740.1 83814755 3851373 785762..786730 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate decarboxylase 786730 3851373 SRU_0597 Salinibacter ruber DSM 13855 UDP-glucuronate decarboxylase YP_444740.1 785762 D 309807 CDS YP_444741.1 83815206 3852287 786780..788597 1 NC_007677.1 identified by match to protein family HMM PF00005; multidrug ABC transporter 788597 3852287 SRU_0598 Salinibacter ruber DSM 13855 multidrug ABC transporter YP_444741.1 786780 D 309807 CDS YP_444742.1 83815850 3852508 788880..790355 1 NC_007677.1 identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; NDP-sugar dehydrogenase 790355 3852508 SRU_0599 Salinibacter ruber DSM 13855 NDP-sugar dehydrogenase YP_444742.1 788880 D 309807 CDS YP_444743.1 83816452 3852819 790352..791347 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; nucleoside-diphosphate-sugar epimerase 791347 3852819 SRU_0600 Salinibacter ruber DSM 13855 nucleoside-diphosphate-sugar epimerase YP_444743.1 790352 D 309807 CDS YP_444744.1 83816225 3851838 791369..792565 1 NC_007677.1 identified by match to protein family HMM PF01041; match to protein family HMM PF01212; perosamine synthetase 792565 3851838 SRU_0601 Salinibacter ruber DSM 13855 perosamine synthetase YP_444744.1 791369 D 309807 CDS YP_444745.1 83814214 3850459 792693..793865 1 NC_007677.1 identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase 793865 3850459 SRU_0602 Salinibacter ruber DSM 13855 UDP-N-acetylglucosamine 2-epimerase YP_444745.1 792693 D 309807 CDS YP_444746.1 83814582 3852971 793870..794766 1 NC_007677.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; formyltransferase 794766 3852971 SRU_0603 Salinibacter ruber DSM 13855 formyltransferase YP_444746.1 793870 D 309807 CDS YP_444747.1 83815448 3850745 794763..795434 1 NC_007677.1 identified by match to protein family HMM PF02585; hypothetical protein 795434 3850745 SRU_0604 Salinibacter ruber DSM 13855 hypothetical protein YP_444747.1 794763 D 309807 CDS YP_444748.1 83816728 3850845 795442..796512 1 NC_007677.1 identified by match to protein family HMM PF03102; sialic acid synthase 796512 spsE 3850845 spsE Salinibacter ruber DSM 13855 sialic acid synthase YP_444748.1 795442 D 309807 CDS YP_444749.1 83814510 3852447 796509..797138 1 NC_007677.1 pilin glycosylation protein PglB 797138 pglB 3852447 pglB Salinibacter ruber DSM 13855 pilin glycosylation protein PglB YP_444749.1 796509 D 309807 CDS YP_444750.1 83816253 3852916 797148..798200 1 NC_007677.1 identified by match to protein family HMM PF00483; match to protein family HMM PF00571; mannose-1-phosphate guanyltransferase 798200 3852916 SRU_0607 Salinibacter ruber DSM 13855 mannose-1-phosphate guanyltransferase YP_444750.1 797148 D 309807 CDS YP_444751.1 83814391 3851164 798197..798907 1 NC_007677.1 identified by match to protein family HMM PF02348; CMP-N-acetlyneuraminic acid synthetase 798907 3851164 SRU_0608 Salinibacter ruber DSM 13855 CMP-N-acetlyneuraminic acid synthetase YP_444751.1 798197 D 309807 CDS YP_444752.1 83815053 3851282 complement(800022..800789) 1 NC_007677.1 identified by match to protein family HMM PF01609; IS5 family transposase 800789 3851282 SRU_0609 Salinibacter ruber DSM 13855 IS5 family transposase YP_444752.1 800022 R 309807 CDS YP_444753.1 83815486 3853080 800947..801414 1 NC_007677.1 hypothetical protein 801414 3853080 SRU_0610 Salinibacter ruber DSM 13855 hypothetical protein YP_444753.1 800947 D 309807 CDS YP_444754.1 83814545 3850793 801600..803027 1 NC_007677.1 hypothetical protein 803027 3850793 SRU_0611 Salinibacter ruber DSM 13855 hypothetical protein YP_444754.1 801600 D 309807 CDS YP_444755.1 83815773 3852156 806019..806651 1 NC_007677.1 methyltransferase domain-containing protein 806651 3852156 SRU_0613 Salinibacter ruber DSM 13855 methyltransferase domain-containing protein YP_444755.1 806019 D 309807 CDS YP_444756.1 83815193 3851774 806744..807997 1 NC_007677.1 hypothetical protein 807997 3851774 SRU_0614 Salinibacter ruber DSM 13855 hypothetical protein YP_444756.1 806744 D 309807 CDS YP_444757.1 83816777 3851205 809074..809835 1 NC_007677.1 identified by match to protein family HMM PF00685; sulfotransferase domain-containing protein 809835 3851205 SRU_0615 Salinibacter ruber DSM 13855 sulfotransferase domain-containing protein YP_444757.1 809074 D 309807 CDS YP_444758.1 83815395 3850907 809851..811047 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 811047 3850907 SRU_0616 Salinibacter ruber DSM 13855 glycoside hydrolase YP_444758.1 809851 D 309807 CDS YP_444759.1 83814304 3851096 813785..814927 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; sugar epimerase BlmG 814927 3851096 SRU_0618 Salinibacter ruber DSM 13855 sugar epimerase BlmG YP_444759.1 813785 D 309807 CDS YP_444760.1 83816365 3851861 815116..816099 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate 5'-epimerase 816099 3851861 SRU_0619 Salinibacter ruber DSM 13855 UDP-glucuronate 5'-epimerase YP_444760.1 815116 D 309807 CDS YP_444761.1 83816036 3851688 816448..817815 1 NC_007677.1 identified by match to protein family HMM PF00534; colanic acid biosynthesis glycosyl transferase 817815 3851688 SRU_0620 Salinibacter ruber DSM 13855 colanic acid biosynthesis glycosyl transferase YP_444761.1 816448 D 309807 CDS YP_444762.1 83815131 3852938 818100..819926 1 NC_007677.1 identified by match to protein family HMM PF00953; glycosyltransferase 819926 3852938 SRU_0621 Salinibacter ruber DSM 13855 glycosyltransferase YP_444762.1 818100 D 309807 CDS YP_444763.1 83816210 3851823 820642..821394 1 NC_007677.1 identified by match to protein family HMM PF02397; glycosyltransferase 821394 3851823 SRU_0622 Salinibacter ruber DSM 13855 glycosyltransferase YP_444763.1 820642 D 309807 CDS YP_444764.1 83816792 3851220 821458..822045 1 NC_007677.1 hypothetical protein 822045 3851220 SRU_0623 Salinibacter ruber DSM 13855 hypothetical protein YP_444764.1 821458 D 309807 CDS YP_444765.1 83814300 3851092 824152..824262 1 NC_007677.1 hypothetical protein 824262 3851092 SRU_0625 Salinibacter ruber DSM 13855 hypothetical protein YP_444765.1 824152 D 309807 CDS YP_444766.1 83815713 3850620 complement(824475..826538) 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase domain/SAM domain-containing protein 826538 3850620 SRU_0626 Salinibacter ruber DSM 13855 phage integrase domain/SAM domain-containing protein YP_444766.1 824475 R 309807 CDS YP_444767.1 83816208 3851821 828427..828597 1 NC_007677.1 killer protein 828597 3851821 SRU_0628 Salinibacter ruber DSM 13855 killer protein YP_444767.1 828427 D 309807 CDS YP_444768.1 83815414 3852989 828581..828898 1 NC_007677.1 identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; addiction module antidote protein 828898 higA 3852989 higA Salinibacter ruber DSM 13855 addiction module antidote protein YP_444768.1 828581 D 309807 CDS YP_444769.1 83814623 3851436 complement(829009..829698) 1 NC_007677.1 transcriptional regulator 829698 3851436 SRU_0630 Salinibacter ruber DSM 13855 transcriptional regulator YP_444769.1 829009 R 309807 CDS YP_444770.1 83815350 3853197 830326..831219 1 NC_007677.1 identified by match to protein family HMM PF01609; ISSru4, transposase 831219 3853197 SRU_0631 Salinibacter ruber DSM 13855 ISSru4, transposase YP_444770.1 830326 D 309807 CDS YP_444771.1 83814689 3853097 831883..832161 1 NC_007677.1 IS1 family transposase insA 832161 3853097 SRU_0632 Salinibacter ruber DSM 13855 IS1 family transposase insA YP_444771.1 831883 D 309807 CDS YP_444772.1 83815943 3850441 832683..833666 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein 833666 3850441 SRU_0634 Salinibacter ruber DSM 13855 NAD dependent epimerase/dehydratase family protein YP_444772.1 832683 D 309807 CDS YP_444773.1 83816169 3851548 833792..834139 1 NC_007677.1 identified by match to protein family HMM PF03683; hypothetical protein 834139 3851548 SRU_0635 Salinibacter ruber DSM 13855 hypothetical protein YP_444773.1 833792 D 309807 CDS YP_444774.1 83814139 3850932 complement(834190..834519) 1 NC_007677.1 hypothetical protein 834519 3850932 SRU_0636 Salinibacter ruber DSM 13855 hypothetical protein YP_444774.1 834190 R 309807 CDS YP_444775.1 83815593 3850774 834685..835239 1 NC_007677.1 identified by match to protein family HMM PF04255; hypothetical protein 835239 3850774 SRU_0637 Salinibacter ruber DSM 13855 hypothetical protein YP_444775.1 834685 D 309807 CDS YP_444776.1 83816616 3853146 835397..835564 1 NC_007677.1 hypothetical protein 835564 3853146 SRU_0638 Salinibacter ruber DSM 13855 hypothetical protein YP_444776.1 835397 D 309807 CDS YP_444777.1 83815201 3851782 835917..836162 1 NC_007677.1 identified by match to protein family HMM TIGR01552; prevent-host-death family protein 836162 3851782 SRU_0639 Salinibacter ruber DSM 13855 prevent-host-death family protein YP_444777.1 835917 D 309807 CDS YP_444778.1 83815321 3852111 836430..836831 1 NC_007677.1 identified by match to protein family HMM PF01797; IS605 family transposase orfA 836831 3852111 SRU_0640 Salinibacter ruber DSM 13855 IS605 family transposase orfA YP_444778.1 836430 D 309807 CDS YP_444779.1 83815914 3851604 836835..837968 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase orfB 837968 3851604 SRU_0641 Salinibacter ruber DSM 13855 IS605 family transposase orfB YP_444779.1 836835 D 309807 CDS YP_444780.1 83815492 3853086 838610..838897 1 NC_007677.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 838897 3853086 SRU_0642 Salinibacter ruber DSM 13855 nucleotidyltransferase domain-containing protein YP_444780.1 838610 D 309807 CDS YP_444781.1 83814699 3853107 839713..840459 1 NC_007677.1 identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 840459 3853107 SRU_0643 Salinibacter ruber DSM 13855 nucleotidyltransferase domain-containing protein YP_444781.1 839713 D 309807 CDS YP_444782.1 83815023 3852435 841709..841933 1 NC_007677.1 hypothetical protein 841933 3852435 SRU_0644 Salinibacter ruber DSM 13855 hypothetical protein YP_444782.1 841709 D 309807 CDS YP_444783.1 83815785 3852168 843024..844457 1 NC_007677.1 hypothetical protein 844457 3852168 SRU_0645 Salinibacter ruber DSM 13855 hypothetical protein YP_444783.1 843024 D 309807 CDS YP_444784.1 83814072 3852476 844564..845070 1 NC_007677.1 identified by match to protein family HMM PF05685; hypothetical protein 845070 3852476 SRU_0646 Salinibacter ruber DSM 13855 hypothetical protein YP_444784.1 844564 D 309807 CDS YP_444785.1 83815028 3852440 845454..845933 1 NC_007677.1 identified by match to protein family HMM PF01817; chorismate mutase 845933 3852440 SRU_0647 Salinibacter ruber DSM 13855 chorismate mutase YP_444785.1 845454 D 309807 CDS YP_444786.1 83816140 3850542 845906..846460 1 NC_007677.1 hypothetical protein 846460 3850542 SRU_0648 Salinibacter ruber DSM 13855 hypothetical protein YP_444786.1 845906 D 309807 CDS YP_444787.1 83816290 3852052 846457..846711 1 NC_007677.1 hypothetical protein 846711 3852052 SRU_0649 Salinibacter ruber DSM 13855 hypothetical protein YP_444787.1 846457 D 309807 CDS YP_444788.1 83815180 3850375 complement(846923..847882) 1 NC_007677.1 identified by match to protein family HMM PF07719; hypothetical protein 847882 3850375 SRU_0650 Salinibacter ruber DSM 13855 hypothetical protein YP_444788.1 846923 R 309807 CDS YP_444789.1 83816167 3851546 848219..849394 1 NC_007677.1 identified by match to protein family HMM PF00483; glucose-1-phosphate thymidylyltransferase 849394 graD 3851546 graD Salinibacter ruber DSM 13855 glucose-1-phosphate thymidylyltransferase YP_444789.1 848219 D 309807 CDS YP_444790.1 83815784 3852167 849703..852162 1 NC_007677.1 Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.; identified by match to protein family HMM PF00488; match to protein family HMM PF01713; match to protein family HMM TIGR01069; MutS2 family protein 852162 3852167 SRU_0652 Salinibacter ruber DSM 13855 MutS2 family protein YP_444790.1 849703 D 309807 CDS YP_444791.1 83816433 3852800 852333..853298 1 NC_007677.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein 853298 3852800 SRU_0653 Salinibacter ruber DSM 13855 D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein YP_444791.1 852333 D 309807 CDS YP_444792.1 83815397 3852972 853483..853947 1 NC_007677.1 hypothetical protein 853947 3852972 SRU_0654 Salinibacter ruber DSM 13855 hypothetical protein YP_444792.1 853483 D 309807 CDS YP_444793.1 83814589 3851069 854074..858180 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensory transduction histidine kinase 858180 3851069 SRU_0655 Salinibacter ruber DSM 13855 sensory transduction histidine kinase YP_444793.1 854074 D 309807 CDS YP_444794.1 83816622 3852076 complement(858199..859455) 1 NC_007677.1 identified by match to protein family HMM PF01435; caax prenyl protease 1 859455 3852076 SRU_0656 Salinibacter ruber DSM 13855 caax prenyl protease 1 YP_444794.1 858199 R 309807 CDS YP_444795.1 83815647 3850711 859505..859831 1 NC_007677.1 hypothetical protein 859831 3850711 SRU_0657 Salinibacter ruber DSM 13855 hypothetical protein YP_444795.1 859505 D 309807 CDS YP_444796.1 83815064 3851293 complement(860716..861069) 1 NC_007677.1 identified by match to protein family HMM PF01381; helix-turn-helix domain-containing protein 861069 3851293 SRU_0658 Salinibacter ruber DSM 13855 helix-turn-helix domain-containing protein YP_444796.1 860716 R 309807 CDS YP_444797.1 83814076 3852480 complement(861066..862838) 1 NC_007677.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; malto-oligosyltrehalose trehalohydrolase 862838 treZ 3852480 treZ Salinibacter ruber DSM 13855 malto-oligosyltrehalose trehalohydrolase YP_444797.1 861066 R 309807 CDS YP_444798.1 83815629 3850692 complement(863029..864549) 1 NC_007677.1 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 864549 malQ 3850692 malQ Salinibacter ruber DSM 13855 4-alpha-glucanotransferase YP_444798.1 863029 R 309807 CDS YP_444799.1 83816159 3851538 complement(864670..866325) 1 NC_007677.1 identified by match to protein family HMM PF03703; membrane flanked domain-containing protein 866325 3851538 SRU_0661 Salinibacter ruber DSM 13855 membrane flanked domain-containing protein YP_444799.1 864670 R 309807 CDS YP_444800.1 83815181 3850376 complement(866382..866930) 1 NC_007677.1 identified by match to protein family HMM PF03703; integral membrane protein 866930 3850376 SRU_0662 Salinibacter ruber DSM 13855 integral membrane protein YP_444800.1 866382 R 309807 CDS YP_444801.1 83814639 3851452 complement(867025..867639) 1 NC_007677.1 identified by match to protein family HMM PF01202; shikimate kinase 867639 aroK 3851452 aroK Salinibacter ruber DSM 13855 shikimate kinase YP_444801.1 867025 R 309807 CDS YP_444802.1 83816613 3853143 867693..868490 1 NC_007677.1 identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 868490 truA 3853143 truA Salinibacter ruber DSM 13855 tRNA pseudouridine synthase A YP_444802.1 867693 D 309807 CDS YP_444803.1 83815997 3852734 868612..868839 1 NC_007677.1 hypothetical protein 868839 3852734 SRU_0665 Salinibacter ruber DSM 13855 hypothetical protein YP_444803.1 868612 D 309807 CDS YP_444804.1 83814265 3852494 868908..870215 1 NC_007677.1 identified by match to protein family HMM PF02274; amidinotransferase 870215 3852494 SRU_0666 Salinibacter ruber DSM 13855 amidinotransferase YP_444804.1 868908 D 309807 CDS YP_444805.1 83816478 3852846 870386..871369 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase class-II 871369 3852846 SRU_0667 Salinibacter ruber DSM 13855 pyridine nucleotide-disulfide oxidoreductase class-II YP_444805.1 870386 D 309807 CDS YP_444806.1 83814807 3852412 871725..872309 1 NC_007677.1 hypothetical protein 872309 3852412 SRU_0668 Salinibacter ruber DSM 13855 hypothetical protein YP_444806.1 871725 D 309807 CDS YP_444807.1 83814722 3851476 complement(872435..873973) 1 NC_007677.1 identified by match to protein family HMM PF02826; D-3-phosphoglycerate dehydrogenase 873973 3851476 SRU_0669 Salinibacter ruber DSM 13855 D-3-phosphoglycerate dehydrogenase YP_444807.1 872435 R 309807 CDS YP_444808.1 83816633 3852087 complement(873995..874861) 1 NC_007677.1 identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase subunit alpha 874861 sucD 3852087 sucD Salinibacter ruber DSM 13855 succinyl-CoA synthetase subunit alpha YP_444808.1 873995 R 309807 CDS YP_444809.1 83815816 3851622 complement(875168..876712) 1 NC_007677.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; amidase 876712 3851622 SRU_0671 Salinibacter ruber DSM 13855 amidase YP_444809.1 875168 R 309807 CDS YP_444810.1 83816574 3851918 complement(876806..877210) 1 NC_007677.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; sec-independent protein transporter 877210 3851918 SRU_0672 Salinibacter ruber DSM 13855 sec-independent protein transporter YP_444810.1 876806 R 309807 CDS YP_444811.1 83814751 3851369 877367..878557 1 NC_007677.1 identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430; adenosine deaminase 878557 add 3851369 add Salinibacter ruber DSM 13855 adenosine deaminase YP_444811.1 877367 D 309807 CDS YP_444812.1 83815325 3852115 878852..880144 1 NC_007677.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 880144 aroA 3852115 aroA Salinibacter ruber DSM 13855 3-phosphoshikimate 1-carboxyvinyltransferase YP_444812.1 878852 D 309807 CDS YP_444813.1 83815552 3852225 complement(880320..881084) 1 NC_007677.1 hypothetical protein 881084 3852225 SRU_0675 Salinibacter ruber DSM 13855 hypothetical protein YP_444813.1 880320 R 309807 CDS YP_444814.1 83816494 3852863 complement(881226..882239) 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 882239 3852863 SRU_0676 Salinibacter ruber DSM 13855 universal stress protein YP_444814.1 881226 R 309807 CDS YP_444815.1 83814348 3851395 complement(882212..882865) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; response regulator receiver domain-containing protein 882865 3851395 SRU_0677 Salinibacter ruber DSM 13855 response regulator receiver domain-containing protein YP_444815.1 882212 R 309807 CDS YP_444816.1 83814530 3852605 complement(883061..884329) 1 NC_007677.1 identified by match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229; sensor protein fixL 884329 3852605 SRU_0678 Salinibacter ruber DSM 13855 sensor protein fixL YP_444816.1 883061 R 309807 CDS YP_444817.1 83816620 3852074 885029..885520 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 885520 3852074 SRU_0679 Salinibacter ruber DSM 13855 universal stress protein YP_444817.1 885029 D 309807 CDS YP_444818.1 83816133 3850535 885566..886507 1 NC_007677.1 DNA-binding protein 886507 3850535 SRU_0680 Salinibacter ruber DSM 13855 DNA-binding protein YP_444818.1 885566 D 309807 CDS YP_444819.1 83816753 3852560 886554..887504 1 NC_007677.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 887504 3852560 SRU_0681 Salinibacter ruber DSM 13855 L-lactate dehydrogenase YP_444819.1 886554 D 309807 CDS YP_444820.1 83815534 3852207 complement(887568..888941) 1 NC_007677.1 identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 888941 ispG 3852207 ispG Salinibacter ruber DSM 13855 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_444820.1 887568 R 309807 CDS YP_444821.1 83815079 3852375 complement(888898..889746) 1 NC_007677.1 identified by match to protein family HMM PF01694; S54 family peptidase 889746 3852375 SRU_0683 Salinibacter ruber DSM 13855 S54 family peptidase YP_444821.1 888898 R 309807 CDS YP_444822.1 83815810 3851616 complement(890155..890883) 1 NC_007677.1 identified by match to protein family HMM PF01694; cytoplasmic membrane protein 890883 3851616 SRU_0684 Salinibacter ruber DSM 13855 cytoplasmic membrane protein YP_444822.1 890155 R 309807 CDS YP_444823.1 83814858 3851398 890971..891726 1 NC_007677.1 identified by match to protein family HMM PF00149; serine/threonine protein phosphatase family protein 891726 3851398 SRU_0685 Salinibacter ruber DSM 13855 serine/threonine protein phosphatase family protein YP_444823.1 890971 D 309807 CDS YP_444824.1 83814224 3850469 891778..894153 1 NC_007677.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase domain-containing protein 894153 3850469 SRU_0686 Salinibacter ruber DSM 13855 transglycosylase domain-containing protein YP_444824.1 891778 D 309807 CDS YP_444825.1 83816085 3850565 894181..895542 1 NC_007677.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; nuclease SbcCD 895542 3850565 SRU_0687 Salinibacter ruber DSM 13855 nuclease SbcCD YP_444825.1 894181 D 309807 CDS YP_444826.1 83815133 3852940 895643..896308 1 NC_007677.1 hypothetical protein 896308 3852940 SRU_0688 Salinibacter ruber DSM 13855 hypothetical protein YP_444826.1 895643 D 309807 CDS YP_444827.1 83814490 3851712 complement(896446..897417) 1 NC_007677.1 identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 897417 ispE 3851712 ispE Salinibacter ruber DSM 13855 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_444827.1 896446 R 309807 CDS YP_444828.2 161986631 3852821 complement(897377..898336) 1 NC_007677.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 898336 thrB 3852821 thrB Salinibacter ruber DSM 13855 homoserine kinase YP_444828.2 897377 R 309807 CDS YP_444829.1 83815685 3851022 complement(898488..900953) 1 NC_007677.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 900953 thrA 3851022 thrA Salinibacter ruber DSM 13855 bifunctional aspartokinase I/homoserine dehydrogenase I YP_444829.1 898488 R 309807 CDS YP_444830.1 83814164 3850487 complement(901062..901919) 1 NC_007677.1 identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; purine nucleoside phosphorylase I 901919 3850487 SRU_0692 Salinibacter ruber DSM 13855 purine nucleoside phosphorylase I YP_444830.1 901062 R 309807 CDS YP_444831.1 83815065 3851294 complement(901974..903080) 1 NC_007677.1 hypothetical protein 903080 3851294 SRU_0693 Salinibacter ruber DSM 13855 hypothetical protein YP_444831.1 901974 R 309807 CDS YP_444832.1 83816855 3852876 complement(903361..904062) 1 NC_007677.1 identified by similarity to GB:AAR35917.1; match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 904062 3852876 SRU_0694 Salinibacter ruber DSM 13855 hypothetical protein YP_444832.1 903361 R 309807 CDS YP_444833.1 83816264 3852927 complement(904237..904467) 1 NC_007677.1 hypothetical protein 904467 3852927 SRU_0695 Salinibacter ruber DSM 13855 hypothetical protein YP_444833.1 904237 R 309807 CDS YP_444834.1 83816468 3852835 complement(904509..907055) 1 NC_007677.1 identified by match to protein family HMM PF02687; permease 907055 3852835 SRU_0696 Salinibacter ruber DSM 13855 permease YP_444834.1 904509 R 309807 CDS YP_444835.1 83815656 3850993 complement(907202..907714) 1 NC_007677.1 identified by match to protein family HMM PF01590; GAF domain-containing protein 907714 3850993 SRU_0697 Salinibacter ruber DSM 13855 GAF domain-containing protein YP_444835.1 907202 R 309807 CDS YP_444836.1 83815246 3853014 complement(907782..908066) 1 NC_007677.1 identified by match to protein family HMM PF04248; hypothetical protein 908066 3853014 SRU_0698 Salinibacter ruber DSM 13855 hypothetical protein YP_444836.1 907782 R 309807 CDS YP_444837.1 83814461 3852202 complement(908547..908756) 1 NC_007677.1 hypothetical protein 908756 3852202 SRU_0699 Salinibacter ruber DSM 13855 hypothetical protein YP_444837.1 908547 R 309807 CDS YP_444838.1 83814659 3851433 complement(909053..910060) 1 NC_007677.1 ABC transporter periplasmic binding component 910060 3851433 SRU_0700 Salinibacter ruber DSM 13855 ABC transporter periplasmic binding component YP_444838.1 909053 R 309807 CDS YP_444839.1 83816631 3852085 910850..911512 1 NC_007677.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00970; phenol hydroxylase 911512 3852085 SRU_0701 Salinibacter ruber DSM 13855 phenol hydroxylase YP_444839.1 910850 D 309807 CDS YP_444840.1 83816276 3852038 911811..913088 1 NC_007677.1 hypothetical protein 913088 3852038 SRU_0702 Salinibacter ruber DSM 13855 hypothetical protein YP_444840.1 911811 D 309807 CDS YP_444841.1 83816651 3852105 913164..913895 1 NC_007677.1 identified by match to protein family HMM PF02254; TRK potassium uptake system protein 913895 trkA 3852105 trkA Salinibacter ruber DSM 13855 TRK potassium uptake system protein YP_444841.1 913164 D 309807 CDS YP_444842.1 83815835 3851641 complement(913998..914312) 1 NC_007677.1 hypothetical protein 914312 3851641 SRU_0704 Salinibacter ruber DSM 13855 hypothetical protein YP_444842.1 913998 R 309807 CDS YP_444843.1 83814308 3851100 complement(914604..915128) 1 NC_007677.1 hypothetical protein 915128 3851100 SRU_0705 Salinibacter ruber DSM 13855 hypothetical protein YP_444843.1 914604 R 309807 CDS YP_444844.1 83816718 3850835 complement(915162..915563) 1 NC_007677.1 hypothetical protein 915563 3850835 SRU_0706 Salinibacter ruber DSM 13855 hypothetical protein YP_444844.1 915162 R 309807 CDS YP_444845.1 83814768 3851698 complement(915610..916809) 1 NC_007677.1 hypothetical protein 916809 3851698 SRU_0707 Salinibacter ruber DSM 13855 hypothetical protein YP_444845.1 915610 R 309807 CDS YP_444846.1 83814213 3850458 complement(916834..917226) 1 NC_007677.1 hypothetical protein 917226 3850458 SRU_0708 Salinibacter ruber DSM 13855 hypothetical protein YP_444846.1 916834 R 309807 CDS YP_444847.1 83816419 3851759 918881..920032 1 NC_007677.1 identified by match to protein family HMM PF00107; IMP dehydrogenase/GMP reductase 920032 3851759 SRU_0709 Salinibacter ruber DSM 13855 IMP dehydrogenase/GMP reductase YP_444847.1 918881 D 309807 CDS YP_444848.1 83815768 3852151 complement(920073..921140) 1 NC_007677.1 identified by match to protein family HMM PF00107; zinc-containing alcohol dehydrogenase 921140 3852151 SRU_0710 Salinibacter ruber DSM 13855 zinc-containing alcohol dehydrogenase YP_444848.1 920073 R 309807 CDS YP_444849.1 83814460 3852201 complement(921307..921780) 1 NC_007677.1 hypothetical protein 921780 3852201 SRU_0711 Salinibacter ruber DSM 13855 hypothetical protein YP_444849.1 921307 R 309807 CDS YP_444850.1 83816738 3852545 922252..922530 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 922530 3852545 SRU_0712 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_444850.1 922252 D 309807 CDS YP_444851.1 83814869 3851409 922494..922970 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 922970 3851409 SRU_0713 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_444851.1 922494 D 309807 CDS YP_444852.1 83814795 3850887 923101..923817 1 NC_007677.1 identified by match to protein family HMM PF00338; ribosomal protein S10p/S20e 923817 3850887 SRU_0714 Salinibacter ruber DSM 13855 ribosomal protein S10p/S20e YP_444852.1 923101 D 309807 CDS YP_444853.1 83816222 3851835 923873..924583 1 NC_007677.1 identified by match to protein family HMM PF00929; exonuclease 924583 3851835 SRU_0715 Salinibacter ruber DSM 13855 exonuclease YP_444853.1 923873 D 309807 CDS YP_444854.1 83815578 3850759 924748..925260 1 NC_007677.1 identified by similarity to SP:P02339; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 925260 ssb 3850759 ssb Salinibacter ruber DSM 13855 single-strand binding protein YP_444854.1 924748 D 309807 CDS YP_444855.1 83816043 3853153 925441..926994 1 NC_007677.1 identified by match to protein family HMM PF00221; phenylalanine and histidine ammonia-lyase 926994 3853153 SRU_0717 Salinibacter ruber DSM 13855 phenylalanine and histidine ammonia-lyase YP_444855.1 925441 D 309807 CDS YP_444856.1 83815427 3852276 927059..929626 1 NC_007677.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase 929626 3852276 SRU_0718 Salinibacter ruber DSM 13855 ATP-dependent DNA helicase YP_444856.1 927059 D 309807 CDS YP_444857.1 83815269 3851050 complement(929787..930305) 1 NC_007677.1 hypothetical protein 930305 3851050 SRU_0719 Salinibacter ruber DSM 13855 hypothetical protein YP_444857.1 929787 R 309807 CDS YP_444858.1 83814275 3850344 complement(931407..931841) 1 NC_007677.1 hypothetical protein 931841 3850344 SRU_0720 Salinibacter ruber DSM 13855 hypothetical protein YP_444858.1 931407 R 309807 CDS YP_444859.1 83816515 3851989 complement(931852..933105) 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; oxidoreductase, FAD-binding 933105 3851989 SRU_0721 Salinibacter ruber DSM 13855 oxidoreductase, FAD-binding YP_444859.1 931852 R 309807 CDS YP_444860.1 83815731 3852739 933270..934763 1 NC_007677.1 identified by match to protein family HMM PF00221; match to protein family HMM TIGR01225; histidine ammonia-lyase 934763 hutH 3852739 hutH Salinibacter ruber DSM 13855 histidine ammonia-lyase YP_444860.1 933270 D 309807 CDS YP_444861.1 83815800 3852183 complement(934902..936284) 1 NC_007677.1 identified by match to protein family HMM PF01370; match to protein family HMM PF03364; match to protein family HMM TIGR01777; hypothetical protein 936284 3852183 SRU_0723 Salinibacter ruber DSM 13855 hypothetical protein YP_444861.1 934902 R 309807 CDS YP_444862.1 83814818 3852384 936579..937691 1 NC_007677.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; HlyD-like secretion protein 937691 3852384 SRU_0724 Salinibacter ruber DSM 13855 HlyD-like secretion protein YP_444862.1 936579 D 309807 CDS YP_444863.1 83814610 3851462 937760..940984 1 NC_007677.1 identified by match to protein family HMM PF00873; multidrug resistance protein 940984 3851462 SRU_0725 Salinibacter ruber DSM 13855 multidrug resistance protein YP_444863.1 937760 D 309807 CDS YP_444864.1 83816320 3851947 941052..942455 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane protein TolC 942455 3851947 SRU_0726 Salinibacter ruber DSM 13855 outer membrane protein TolC YP_444864.1 941052 D 309807 CDS YP_444865.1 83815400 3852975 complement(942493..943344) 1 NC_007677.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 943344 hisG 3852975 hisG Salinibacter ruber DSM 13855 ATP phosphoribosyltransferase YP_444865.1 942493 R 309807 CDS YP_444866.1 83814621 3851473 complement(943469..943732) 1 NC_007677.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 943732 hisE 3851473 hisE Salinibacter ruber DSM 13855 phosphoribosyl-ATP pyrophosphatase YP_444866.1 943469 R 309807 CDS YP_444867.1 83816676 3852677 944011..944610 1 NC_007677.1 identified by match to protein family HMM PF02632; bioY family protein 944610 3852677 SRU_0729 Salinibacter ruber DSM 13855 bioY family protein YP_444867.1 944011 D 309807 CDS YP_444868.1 83815866 3852524 complement(944660..944854) 1 NC_007677.1 identified by match to protein family HMM TIGR01552; prevent-host-death family protein 944854 3852524 SRU_0730 Salinibacter ruber DSM 13855 prevent-host-death family protein YP_444868.1 944660 R 309807 CDS YP_444869.1 83814299 3851091 complement(945064..945540) 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 945540 3851091 SRU_0731 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_444869.1 945064 R 309807 CDS YP_444870.1 83815056 3851285 complement(945504..945782) 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 945782 3851285 SRU_0732 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_444870.1 945504 R 309807 CDS YP_444871.1 83815453 3850750 946412..946945 1 NC_007677.1 hypothetical protein 946945 3850750 SRU_0733 Salinibacter ruber DSM 13855 hypothetical protein YP_444871.1 946412 D 309807 CDS YP_444872.1 83816275 3852037 947067..947513 1 NC_007677.1 hypothetical protein 947513 3852037 SRU_0734 Salinibacter ruber DSM 13855 hypothetical protein YP_444872.1 947067 D 309807 CDS YP_444873.1 83815831 3851637 complement(947618..947887) 1 NC_007677.1 identified by match to protein family HMM PF02609; exodeoxyribonuclease VII small subunit 947887 xseB 3851637 xseB Salinibacter ruber DSM 13855 exodeoxyribonuclease VII small subunit YP_444873.1 947618 R 309807 CDS YP_444874.1 83816577 3851921 947999..948772 1 NC_007677.1 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 948772 3851921 SRU_0736 Salinibacter ruber DSM 13855 short chain dehydrogenase/reductase family oxidoreductase YP_444874.1 947999 D 309807 CDS YP_444875.1 83814288 3850357 complement(948782..949921) 1 NC_007677.1 hypothetical protein 949921 3850357 SRU_0737 Salinibacter ruber DSM 13855 hypothetical protein YP_444875.1 948782 R 309807 CDS YP_444876.1 83814944 3851327 complement(950148..951344) 1 NC_007677.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 951344 xseA 3851327 xseA Salinibacter ruber DSM 13855 exodeoxyribonuclease VII large subunit YP_444876.1 950148 R 309807 CDS YP_444877.1 83816182 3851561 951619..952158 1 NC_007677.1 identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 952158 3851561 SRU_0739 Salinibacter ruber DSM 13855 low molecular weight protein-tyrosine-phosphatase YP_444877.1 951619 D 309807 CDS YP_444878.1 83814282 3850351 952175..953107 1 NC_007677.1 identified by match to protein family HMM PF01636; match to protein family HMM PF03881; phosphotransferase family protein 953107 3850351 SRU_0740 Salinibacter ruber DSM 13855 phosphotransferase family protein YP_444878.1 952175 D 309807 CDS YP_444879.1 83815978 3852715 complement(953128..953748) 1 NC_007677.1 identified by match to protein family HMM PF00111; 2Fe-2S iron-sulfur cluster binding domain-containing protein 953748 3852715 SRU_0741 Salinibacter ruber DSM 13855 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_444879.1 953128 R 309807 CDS YP_444880.1 83814347 3851394 complement(953761..954645) 1 NC_007677.1 bacteriorhodopsin-like protein 954645 brp 3851394 brp Salinibacter ruber DSM 13855 bacteriorhodopsin-like protein YP_444880.1 953761 R 309807 CDS YP_444881.1 83814735 3851489 complement(954849..956324) 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; phytoene dehydrogenase and-like proteins 956324 3851489 SRU_0743 Salinibacter ruber DSM 13855 phytoene dehydrogenase and-like proteins YP_444881.1 954849 R 309807 CDS YP_444882.1 83815363 3850659 complement(956421..957224) 1 NC_007677.1 hypothetical protein 957224 ftsQ 3850659 ftsQ Salinibacter ruber DSM 13855 hypothetical protein YP_444882.1 956421 R 309807 CDS YP_444883.1 83815617 3850680 957306..958688 1 NC_007677.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 958688 hemN 3850680 hemN Salinibacter ruber DSM 13855 coproporphyrinogen III oxidase YP_444883.1 957306 D 309807 CDS YP_444884.1 83816238 3852901 958737..960230 1 NC_007677.1 hypothetical protein 960230 3852901 SRU_0747 Salinibacter ruber DSM 13855 hypothetical protein YP_444884.1 958737 D 309807 CDS YP_444885.1 83814365 3851353 960190..960837 1 NC_007677.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family transcriptional regulator 960837 3851353 SRU_0748 Salinibacter ruber DSM 13855 rrf2 family transcriptional regulator YP_444885.1 960190 D 309807 CDS YP_444886.1 83814982 3851191 complement(960869..961615) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; response regulator 961615 3851191 SRU_0749 Salinibacter ruber DSM 13855 response regulator YP_444886.1 960869 R 309807 CDS YP_444887.1 83814290 3850359 complement(961658..962797) 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; histidine kinase family protein 962797 3850359 SRU_0750 Salinibacter ruber DSM 13855 histidine kinase family protein YP_444887.1 961658 R 309807 CDS YP_444888.1 83816307 3852069 complement(962841..963671) 1 NC_007677.1 identified by match to protein family HMM PF01061; integral membrane protein 963671 3852069 SRU_0751 Salinibacter ruber DSM 13855 integral membrane protein YP_444888.1 962841 R 309807 CDS YP_444889.1 83815516 3852326 complement(963696..964664) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 964664 3852326 SRU_0752 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_444889.1 963696 R 309807 CDS YP_444890.1 83815442 3850739 complement(964704..965570) 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 965570 3850739 SRU_0753 Salinibacter ruber DSM 13855 hypothetical protein YP_444890.1 964704 R 309807 CDS YP_444891.1 83814615 3851467 complement(965628..967838) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor protein 967838 3851467 SRU_0754 Salinibacter ruber DSM 13855 outer membrane receptor protein YP_444891.1 965628 R 309807 CDS YP_444892.1 83816677 3852678 complement(968062..968250) 1 NC_007677.1 hypothetical protein 968250 3852678 SRU_0755 Salinibacter ruber DSM 13855 hypothetical protein YP_444892.1 968062 R 309807 CDS YP_444893.1 83815058 3851287 complement(968906..969985) 1 NC_007677.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase 969985 bioB 3851287 bioB Salinibacter ruber DSM 13855 biotin synthase YP_444893.1 968906 R 309807 CDS YP_444894.1 83814315 3851518 complement(969982..971118) 1 NC_007677.1 hypothetical protein 971118 3851518 SRU_0757 Salinibacter ruber DSM 13855 hypothetical protein YP_444894.1 969982 R 309807 CDS YP_444895.1 83816062 3853172 971226..971693 1 NC_007677.1 hypothetical protein 971693 3853172 SRU_0758 Salinibacter ruber DSM 13855 hypothetical protein YP_444895.1 971226 D 309807 CDS YP_444896.1 83815646 3850710 971923..974196 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensory transduction histidine kinase 974196 3850710 SRU_0759 Salinibacter ruber DSM 13855 sensory transduction histidine kinase YP_444896.1 971923 D 309807 CDS YP_444897.1 83815184 3850379 974405..975343 1 NC_007677.1 identified by match to protein family HMM PF00294; carbohydrate kinase 975343 3850379 SRU_0760 Salinibacter ruber DSM 13855 carbohydrate kinase YP_444897.1 974405 D 309807 CDS YP_444898.1 83814702 3851495 975403..975831 1 NC_007677.1 identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 975831 folB 3851495 folB Salinibacter ruber DSM 13855 dihydroneopterin aldolase YP_444898.1 975403 D 309807 CDS YP_444899.1 83816723 3850840 complement(975839..976693) 1 NC_007677.1 identified by match to protein family HMM PF00117; glutamine amidotransferase 976693 3850840 SRU_0762 Salinibacter ruber DSM 13855 glutamine amidotransferase YP_444899.1 975839 R 309807 CDS YP_444900.1 83816344 3851971 complement(976805..977521) 1 NC_007677.1 identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf 977521 maf 3851971 maf Salinibacter ruber DSM 13855 septum formation protein Maf YP_444900.1 976805 R 309807 CDS YP_444901.1 83814231 3850476 977607..978464 1 NC_007677.1 identified by match to protein family HMM PF01656; Soj family protein 978464 3850476 SRU_0764 Salinibacter ruber DSM 13855 Soj family protein YP_444901.1 977607 D 309807 CDS YP_444902.1 83816731 3850848 complement(978544..978870) 1 NC_007677.1 hypothetical protein 978870 3850848 SRU_0765 Salinibacter ruber DSM 13855 hypothetical protein YP_444902.1 978544 R 309807 CDS YP_444903.1 83816145 3850547 complement(978923..980380) 1 NC_007677.1 identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter 980380 3850547 SRU_0766 Salinibacter ruber DSM 13855 sodium- and chloride-dependent transporter YP_444903.1 978923 R 309807 CDS YP_444904.1 83815333 3852123 980578..981768 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; N-acyl-L-amino acid amidohydrolase 981768 3852123 SRU_0767 Salinibacter ruber DSM 13855 N-acyl-L-amino acid amidohydrolase YP_444904.1 980578 D 309807 CDS YP_444905.1 83815875 3852533 complement(981797..982453) 1 NC_007677.1 esterase/lipase 982453 3852533 SRU_0768 Salinibacter ruber DSM 13855 esterase/lipase YP_444905.1 981797 R 309807 CDS YP_444906.1 83815481 3853075 complement(982500..983474) 1 NC_007677.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; lysine decarboxylase-like protein 983474 3853075 SRU_0769 Salinibacter ruber DSM 13855 lysine decarboxylase-like protein YP_444906.1 982500 R 309807 CDS YP_444907.1 83814611 3851463 complement(983772..984956) 1 NC_007677.1 identified by match to protein family HMM PF08007; cupin superfamily protein 984956 3851463 SRU_0770 Salinibacter ruber DSM 13855 cupin superfamily protein YP_444907.1 983772 R 309807 CDS YP_444908.1 83814310 3851513 complement(985121..985309) 1 NC_007677.1 hypothetical protein 985309 3851513 SRU_0771 Salinibacter ruber DSM 13855 hypothetical protein YP_444908.1 985121 R 309807 CDS YP_444909.1 83814976 3851185 complement(985351..985539) 1 NC_007677.1 hypothetical protein 985539 3851185 SRU_0772 Salinibacter ruber DSM 13855 hypothetical protein YP_444909.1 985351 R 309807 CDS YP_444910.1 83815991 3852728 985674..986375 1 NC_007677.1 hypothetical protein 986375 3852728 SRU_0773 Salinibacter ruber DSM 13855 hypothetical protein YP_444910.1 985674 D 309807 CDS YP_444911.1 83816593 3853123 986422..986748 1 NC_007677.1 hypothetical protein 986748 3853123 SRU_0774 Salinibacter ruber DSM 13855 hypothetical protein YP_444911.1 986422 D 309807 CDS YP_444912.1 83815973 3852710 986911..988209 1 NC_007677.1 identified by match to protein family HMM PF00464; match to protein family HMM PF01212; serine hydroxymethyltransferase 988209 glyA 3852710 glyA Salinibacter ruber DSM 13855 serine hydroxymethyltransferase YP_444912.1 986911 D 309807 CDS YP_444913.1 83816611 3853141 988413..988916 1 NC_007677.1 identified by match to protein family HMM PF00156; orotate phosphoribosyltransferase 988916 3853141 SRU_0776 Salinibacter ruber DSM 13855 orotate phosphoribosyltransferase YP_444913.1 988413 D 309807 CDS YP_444914.1 83815616 3850679 989070..989834 1 NC_007677.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 989834 tatC 3850679 tatC Salinibacter ruber DSM 13855 Sec-independent protein translocase TatC YP_444914.1 989070 D 309807 CDS YP_444915.1 83814319 3851522 989874..991529 1 NC_007677.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxy-terminal peptidase 991529 prc 3851522 prc Salinibacter ruber DSM 13855 carboxy-terminal peptidase YP_444915.1 989874 D 309807 CDS YP_444916.1 83816048 3853158 complement(991493..991585) 1 NC_007677.1 hypothetical protein 991585 3853158 SRU_0778 Salinibacter ruber DSM 13855 hypothetical protein YP_444916.1 991493 R 309807 CDS YP_444917.1 83814815 3852420 991910..992521 1 NC_007677.1 hypothetical protein 992521 3852420 SRU_0780 Salinibacter ruber DSM 13855 hypothetical protein YP_444917.1 991910 D 309807 CDS YP_444918.1 83816040 3853150 992609..993046 1 NC_007677.1 identified by match to protein family HMM PF00293; MutT/nudix family protein 993046 3853150 SRU_0781 Salinibacter ruber DSM 13855 MutT/nudix family protein YP_444918.1 992609 D 309807 CDS YP_444919.1 83816822 3851132 complement(993415..994191) 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 994191 3851132 SRU_0783 Salinibacter ruber DSM 13855 universal stress protein YP_444919.1 993415 R 309807 CDS YP_444920.1 83815109 3852640 complement(994617..997616) 1 NC_007677.1 hypothetical protein 997616 3852640 SRU_0784 Salinibacter ruber DSM 13855 hypothetical protein YP_444920.1 994617 R 309807 CDS YP_444921.1 83815156 3850390 complement(997594..998577) 1 NC_007677.1 identified by match to protein family HMM PF00480; xylose repressor 998577 3850390 SRU_0785 Salinibacter ruber DSM 13855 xylose repressor YP_444921.1 997594 R 309807 CDS YP_444922.1 83815603 3850784 complement(998662..998958) 1 NC_007677.1 identified by match to protein family HMM PF04977; septum formation initiator superfamily protein 998958 3850784 SRU_0786 Salinibacter ruber DSM 13855 septum formation initiator superfamily protein YP_444922.1 998662 R 309807 CDS YP_444923.1 83816221 3851834 complement(998974..1000263) 1 NC_007677.1 identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase 1000263 eno 3851834 eno Salinibacter ruber DSM 13855 phosphopyruvate hydratase YP_444923.1 998974 R 309807 CDS YP_444924.1 83816825 3851135 complement(1000524..1001747) 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1001747 3851135 SRU_0788 Salinibacter ruber DSM 13855 hypothetical protein YP_444924.1 1000524 R 309807 CDS YP_444925.1 83815207 3852288 complement(1002013..1003185) 1 NC_007677.1 hypothetical protein 1003185 3852288 SRU_0789 Salinibacter ruber DSM 13855 hypothetical protein YP_444925.1 1002013 R 309807 CDS YP_444926.1 83815775 3852158 complement(1003402..1004796) 1 NC_007677.1 hypothetical protein 1004796 3852158 SRU_0790 Salinibacter ruber DSM 13855 hypothetical protein YP_444926.1 1003402 R 309807 CDS YP_444927.1 83816146 3850548 complement(1004989..1005780) 1 NC_007677.1 glycogen synthase 1005780 3850548 SRU_0791 Salinibacter ruber DSM 13855 glycogen synthase YP_444927.1 1004989 R 309807 CDS YP_444928.1 83815517 3852327 1006660..1007424 1 NC_007677.1 identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein lolD 1007424 3852327 SRU_0792 Salinibacter ruber DSM 13855 lipoprotein-releasing system ATP-binding protein lolD YP_444928.1 1006660 D 309807 CDS YP_444929.1 83814862 3851402 1007494..1007868 1 NC_007677.1 hypothetical protein 1007868 3851402 SRU_0794 Salinibacter ruber DSM 13855 hypothetical protein YP_444929.1 1007494 D 309807 CDS YP_444930.1 83814151 3850944 complement(1007865..1008725) 1 NC_007677.1 hypothetical protein 1008725 3850944 SRU_0793 Salinibacter ruber DSM 13855 hypothetical protein YP_444930.1 1007865 R 309807 CDS YP_444931.1 83816688 3852689 complement(1008825..1010060) 1 NC_007677.1 hypothetical protein 1010060 3852689 SRU_0795 Salinibacter ruber DSM 13855 hypothetical protein YP_444931.1 1008825 R 309807 CDS YP_444932.2 161986634 3852772 complement(1010140..1011138) 1 NC_007677.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1011138 lipA 3852772 lipA Salinibacter ruber DSM 13855 lipoyl synthase YP_444932.2 1010140 R 309807 CDS YP_444933.1 83815119 3852650 complement(1011372..1011962) 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 1011962 3852650 SRU_0797 Salinibacter ruber DSM 13855 acetyltransferase YP_444933.1 1011372 R 309807 CDS YP_444934.1 83814117 3851104 1012179..1013894 1 NC_007677.1 identified by match to protein family HMM PF07969; amidohydrolase 1013894 3851104 SRU_0798 Salinibacter ruber DSM 13855 amidohydrolase YP_444934.1 1012179 D 309807 CDS YP_444935.1 83814575 3852964 1013977..1015365 1 NC_007677.1 catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase 1015365 3852964 SRU_0799 Salinibacter ruber DSM 13855 L-lysine aminotransferase YP_444935.1 1013977 D 309807 CDS YP_444936.1 83816632 3852086 complement(1015436..1017154) 1 NC_007677.1 identified by match to protein family HMM TIGR00634; DNA repair protein RecN 1017154 recN 3852086 recN Salinibacter ruber DSM 13855 DNA repair protein RecN YP_444936.1 1015436 R 309807 CDS YP_444937.1 83815981 3852718 complement(1017294..1020776) 1 NC_007677.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 1020776 secA 3852718 secA Salinibacter ruber DSM 13855 preprotein translocase subunit SecA YP_444937.1 1017294 R 309807 CDS YP_444938.1 83815086 3852382 1020794..1022029 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 1022029 3852382 SRU_0802 Salinibacter ruber DSM 13855 universal stress protein YP_444938.1 1020794 D 309807 CDS YP_444939.1 83814313 3851516 complement(1022104..1022997) 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase family site specific recombinase 1022997 3851516 SRU_0803 Salinibacter ruber DSM 13855 phage integrase family site specific recombinase YP_444939.1 1022104 R 309807 CDS YP_444940.1 83814946 3851329 1023513..1024697 1 NC_007677.1 identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA 1024697 corA 3851329 corA Salinibacter ruber DSM 13855 magnesium and cobalt transport protein CorA YP_444940.1 1023513 D 309807 CDS YP_444941.1 83814122 3851109 1024815..1025387 1 NC_007677.1 hypothetical protein 1025387 3851109 SRU_0805 Salinibacter ruber DSM 13855 hypothetical protein YP_444941.1 1024815 D 309807 CDS YP_444942.1 83814707 3851500 1025567..1026613 1 NC_007677.1 identified by match to protein family HMM PF07396; phosphate-selective porin O and P superfamily protein 1026613 3851500 SRU_0806 Salinibacter ruber DSM 13855 phosphate-selective porin O and P superfamily protein YP_444942.1 1025567 D 309807 CDS YP_444943.1 83816535 3852009 complement(1026708..1027448) 1 NC_007677.1 hypothetical protein 1027448 3852009 SRU_0807 Salinibacter ruber DSM 13855 hypothetical protein YP_444943.1 1026708 R 309807 CDS YP_444944.1 83816082 3850562 complement(1027509..1028387) 1 NC_007677.1 identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 1028387 3850562 SRU_0808 Salinibacter ruber DSM 13855 small conductance mechanosensitive ion channel (MscS) family protein YP_444944.1 1027509 R 309807 CDS YP_444945.1 83814884 3851306 complement(1028428..1029471) 1 NC_007677.1 hypothetical protein 1029471 3851306 SRU_0809 Salinibacter ruber DSM 13855 hypothetical protein YP_444945.1 1028428 R 309807 CDS YP_444946.1 83814967 3851273 1029616..1031433 1 NC_007677.1 identified by match to protein family HMM PF02080; TrkA domain-containing protein 1031433 3851273 SRU_0810 Salinibacter ruber DSM 13855 TrkA domain-containing protein YP_444946.1 1029616 D 309807 CDS YP_444947.1 83814350 3851338 complement(1031637..1033556) 1 NC_007677.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; 2-oxo acid dehydrogenase acyltransferase catalytic subunit 1033556 3851338 SRU_0811 Salinibacter ruber DSM 13855 2-oxo acid dehydrogenase acyltransferase catalytic subunit YP_444947.1 1031637 R 309807 CDS YP_444948.1 83816212 3851825 1033546..1035945 1 NC_007677.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1035945 hppA 3851825 hppA Salinibacter ruber DSM 13855 membrane-bound proton-translocating pyrophosphatase YP_444948.1 1033546 D 309807 CDS YP_444949.1 83815615 3850678 complement(1036035..1036601) 1 NC_007677.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1036601 3850678 SRU_0813 Salinibacter ruber DSM 13855 peptidyl-tRNA hydrolase YP_444949.1 1036035 R 309807 CDS YP_444950.1 83816854 3852875 complement(1036702..1037454) 1 NC_007677.1 identified by match to protein family HMM TIGR00731; 50S ribosomal protein L25 1037454 3852875 SRU_0814 Salinibacter ruber DSM 13855 50S ribosomal protein L25 YP_444950.1 1036702 R 309807 CDS YP_444951.1 83815989 3852726 complement(1037621..1038583) 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 1038583 3852726 SRU_0815 Salinibacter ruber DSM 13855 ribose-phosphate pyrophosphokinase YP_444951.1 1037621 R 309807 CDS YP_444952.1 83816279 3852041 complement(1038837..1040177) 1 NC_007677.1 identified by match to protein family HMM PF00293; match to protein family HMM PF01008; translation initiation factor eIF-2B alpha subunit 1040177 3852041 SRU_0817 Salinibacter ruber DSM 13855 translation initiation factor eIF-2B alpha subunit YP_444952.1 1038837 R 309807 CDS YP_444953.1 83814752 3851370 1040119..1041702 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; TPR-containing protein Mql1 1041702 3851370 SRU_0818 Salinibacter ruber DSM 13855 TPR-containing protein Mql1 YP_444953.1 1040119 D 309807 CDS YP_444954.1 83815029 3852441 1041874..1042497 1 NC_007677.1 hypothetical protein 1042497 3852441 SRU_0819 Salinibacter ruber DSM 13855 hypothetical protein YP_444954.1 1041874 D 309807 CDS YP_444955.1 83815451 3850748 complement(1042568..1042873) 1 NC_007677.1 identified by match to protein family HMM PF01106; hypothetical protein 1042873 3850748 SRU_0820 Salinibacter ruber DSM 13855 hypothetical protein YP_444955.1 1042568 R 309807 CDS YP_444956.1 83815172 3850367 complement(1043019..1044143) 1 NC_007677.1 mrp protein 1044143 mrp 3850367 mrp Salinibacter ruber DSM 13855 mrp protein YP_444956.1 1043019 R 309807 CDS YP_444957.1 83815665 3851002 complement(1044392..1045399) 1 NC_007677.1 identified by match to protein family HMM PF02541; Ppx/GppA phosphatase family protein 1045399 3851002 SRU_0822 Salinibacter ruber DSM 13855 Ppx/GppA phosphatase family protein YP_444957.1 1044392 R 309807 CDS YP_444958.1 83816758 3852565 complement(1045360..1046202) 1 NC_007677.1 identified by match to protein family HMM PF05175; match to protein family HMM PF06325; 50S ribosomal protein L11 methyltransferase 1046202 prmA 3852565 prmA Salinibacter ruber DSM 13855 50S ribosomal protein L11 methyltransferase YP_444958.1 1045360 R 309807 CDS YP_444959.1 83814558 3850806 complement(1046228..1046962) 1 NC_007677.1 identified by match to protein family HMM PF01209; match to protein family HMM PF02353; match to protein family HMM TIGR01934; ubiquinone/menaquinone biosynthesis methyltransferase UbiE 1046962 ubiE 3850806 ubiE Salinibacter ruber DSM 13855 ubiquinone/menaquinone biosynthesis methyltransferase UbiE YP_444959.1 1046228 R 309807 CDS YP_444960.1 83814726 3851480 complement(1047272..1048354) 1 NC_007677.1 identified by match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase 1048354 pfkA 3851480 pfkA Salinibacter ruber DSM 13855 6-phosphofructokinase YP_444960.1 1047272 R 309807 CDS YP_444961.1 83815375 3850671 complement(1048317..1049282) 1 NC_007677.1 hypothetical protein 1049282 3850671 SRU_0826 Salinibacter ruber DSM 13855 hypothetical protein YP_444961.1 1048317 R 309807 CDS YP_444962.1 83816426 3852793 complement(1049320..1050000) 1 NC_007677.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1050000 aat 3852793 aat Salinibacter ruber DSM 13855 leucyl/phenylalanyl-tRNA--protein transferase YP_444962.1 1049320 R 309807 CDS YP_444963.1 83815790 3852173 1050092..1050652 1 NC_007677.1 identified by match to protein family HMM PF00364; pyruvate carboxylase 1050652 pycA 3852173 pycA Salinibacter ruber DSM 13855 pyruvate carboxylase YP_444963.1 1050092 D 309807 CDS YP_444964.1 83815161 3850395 1050649..1051683 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; dihydroflavonol 4-reductase 1051683 dfrA 3850395 dfrA Salinibacter ruber DSM 13855 dihydroflavonol 4-reductase YP_444964.1 1050649 D 309807 CDS YP_444965.1 83814535 3852610 complement(1052108..1052359) 1 NC_007677.1 hypothetical protein 1052359 3852610 SRU_0830 Salinibacter ruber DSM 13855 hypothetical protein YP_444965.1 1052108 R 309807 CDS YP_444966.1 83814785 3850877 1052717..1053358 1 NC_007677.1 hypothetical protein 1053358 3850877 SRU_0831 Salinibacter ruber DSM 13855 hypothetical protein YP_444966.1 1052717 D 309807 CDS YP_444967.1 83815600 3850781 1053418..1054071 1 NC_007677.1 hypothetical protein 1054071 3850781 SRU_0832 Salinibacter ruber DSM 13855 hypothetical protein YP_444967.1 1053418 D 309807 CDS YP_444968.1 83814592 3851072 complement(1054200..1056293) 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; chemotaxis transducer 1056293 3851072 SRU_0833 Salinibacter ruber DSM 13855 chemotaxis transducer YP_444968.1 1054200 R 309807 CDS YP_444969.1 83815407 3852982 complement(1056663..1060094) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two component system histidine kinase 1060094 3852982 SRU_0834 Salinibacter ruber DSM 13855 two component system histidine kinase YP_444969.1 1056663 R 309807 CDS YP_444970.1 83814296 3851088 1061013..1063751 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component hybrid sensor and regulator 1063751 3851088 SRU_0835 Salinibacter ruber DSM 13855 two-component hybrid sensor and regulator YP_444970.1 1061013 D 309807 CDS YP_444971.1 83816305 3852067 1064027..1066117 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02518; response regulator receiver domain-containing protein 1066117 3852067 SRU_0836 Salinibacter ruber DSM 13855 response regulator receiver domain-containing protein YP_444971.1 1064027 D 309807 CDS YP_444972.1 83816371 3851867 complement(1066209..1068737) 1 NC_007677.1 identified by match to protein family HMM PF00282; tyrosine decarboxylase 1068737 3851867 SRU_0837 Salinibacter ruber DSM 13855 tyrosine decarboxylase YP_444972.1 1066209 R 309807 CDS YP_444973.1 83815750 3852758 1068969..1069454 1 NC_007677.1 identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 1069454 3852758 SRU_0838 Salinibacter ruber DSM 13855 PTS system transporter subunit IIA YP_444973.1 1068969 D 309807 CDS YP_444974.1 83815951 3850449 1069525..1070832 1 NC_007677.1 identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 1070832 hisS 3850449 hisS Salinibacter ruber DSM 13855 histidyl-tRNA synthetase YP_444974.1 1069525 D 309807 CDS YP_444975.1 83815332 3852122 1070963..1072123 1 NC_007677.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1072123 3852122 SRU_0840 Salinibacter ruber DSM 13855 endonuclease/exonuclease/phosphatase family protein YP_444975.1 1070963 D 309807 CDS YP_444976.1 83816173 3851552 complement(1072622..1073986) 1 NC_007677.1 identified by match to protein family HMM PF01593; amine oxidase 1073986 3851552 SRU_0841 Salinibacter ruber DSM 13855 amine oxidase YP_444976.1 1072622 R 309807 CDS YP_444977.1 83814788 3850880 complement(1073970..1075565) 1 NC_007677.1 hypothetical protein 1075565 3850880 SRU_0842 Salinibacter ruber DSM 13855 hypothetical protein YP_444977.1 1073970 R 309807 CDS YP_444978.1 83814270 3852499 complement(1075605..1076864) 1 NC_007677.1 hypothetical protein 1076864 3852499 SRU_0843 Salinibacter ruber DSM 13855 hypothetical protein YP_444978.1 1075605 R 309807 CDS YP_444979.1 83815117 3852648 complement(1076943..1079504) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent outer membrane protein 1079504 3852648 SRU_0844 Salinibacter ruber DSM 13855 TonB-dependent outer membrane protein YP_444979.1 1076943 R 309807 CDS YP_444980.1 83814496 3851718 complement(1079554..1079790) 1 NC_007677.1 hypothetical protein 1079790 3851718 SRU_0845 Salinibacter ruber DSM 13855 hypothetical protein YP_444980.1 1079554 R 309807 CDS YP_444981.1 83815285 3850951 complement(1079966..1081834) 1 NC_007677.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1081834 glgB 3850951 glgB Salinibacter ruber DSM 13855 glycogen branching protein YP_444981.1 1079966 R 309807 CDS YP_444982.1 83814676 3852261 complement(1081880..1085338) 1 NC_007677.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; trehalose synthase 1085338 3852261 SRU_0847 Salinibacter ruber DSM 13855 trehalose synthase YP_444982.1 1081880 R 309807 CDS YP_444983.1 83816594 3853124 complement(1085352..1087343) 1 NC_007677.1 alpha amylase family protein 1087343 3853124 SRU_0848 Salinibacter ruber DSM 13855 alpha amylase family protein YP_444983.1 1085352 R 309807 CDS YP_444984.1 83815924 3850422 1087502..1089796 1 NC_007677.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching protein GlgX 1089796 glgX 3850422 glgX Salinibacter ruber DSM 13855 glycogen debranching protein GlgX YP_444984.1 1087502 D 309807 CDS YP_444985.1 83814871 3851411 1089816..1091213 1 NC_007677.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM TIGR01409; glucose-fructose oxidoreductase 1091213 gfo 3851411 gfo Salinibacter ruber DSM 13855 glucose-fructose oxidoreductase YP_444985.1 1089816 D 309807 CDS YP_444986.1 83814267 3852496 1091707..1093263 1 NC_007677.1 hypothetical protein 1093263 3852496 SRU_0851 Salinibacter ruber DSM 13855 hypothetical protein YP_444986.1 1091707 D 309807 CDS YP_444987.1 83816160 3851539 1093356..1096190 1 NC_007677.1 identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein 1096190 3851539 SRU_0852 Salinibacter ruber DSM 13855 zinc-dependent carboxypeptidase domain-containing protein YP_444987.1 1093356 D 309807 CDS YP_444988.1 83815541 3852214 1096099..1096992 1 NC_007677.1 identified by match to protein family HMM PF01609; ISSru4, transposase 1096992 3852214 SRU_0853 Salinibacter ruber DSM 13855 ISSru4, transposase YP_444988.1 1096099 D 309807 CDS YP_444989.1 83814549 3850797 complement(1097120..1097521) 1 NC_007677.1 identified by match to protein family HMM PF00072; mutant NtrC-like activator 1097521 3850797 SRU_0854 Salinibacter ruber DSM 13855 mutant NtrC-like activator YP_444989.1 1097120 R 309807 CDS YP_444990.1 83816768 3852575 complement(1098230..1098907) 1 NC_007677.1 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TRK potassium uptake system protein 1098907 3852575 SRU_0855 Salinibacter ruber DSM 13855 TRK potassium uptake system protein YP_444990.1 1098230 R 309807 CDS YP_444991.1 83815919 3851609 1099984..1101171 1 NC_007677.1 DNA polymerase III subunit delta' 1101171 3851609 SRU_0857 Salinibacter ruber DSM 13855 DNA polymerase III subunit delta' YP_444991.1 1099984 D 309807 CDS YP_444992.1 83816524 3851998 1101287..1102054 1 NC_007677.1 hypothetical protein 1102054 3851998 SRU_0858 Salinibacter ruber DSM 13855 hypothetical protein YP_444992.1 1101287 D 309807 CDS YP_444993.1 83815276 3851057 1102240..1103034 1 NC_007677.1 hypothetical protein 1103034 3851057 SRU_0859 Salinibacter ruber DSM 13855 hypothetical protein YP_444993.1 1102240 D 309807 CDS YP_444994.1 83815301 3852130 1103080..1103883 1 NC_007677.1 hypothetical protein 1103883 3852130 SRU_0860 Salinibacter ruber DSM 13855 hypothetical protein YP_444994.1 1103080 D 309807 CDS YP_444995.1 83816093 3850573 1103901..1105730 1 NC_007677.1 hypothetical protein 1105730 3850573 SRU_0861 Salinibacter ruber DSM 13855 hypothetical protein YP_444995.1 1103901 D 309807 CDS YP_444996.1 83814099 3850912 complement(1105761..1106183) 1 NC_007677.1 identified by match to protein family HMM PF00166; chaperonin, 10 kDa 1106183 groS 3850912 groS Salinibacter ruber DSM 13855 chaperonin, 10 kDa YP_444996.1 1105761 R 309807 CDS YP_444997.1 83814863 3851403 complement(1106335..1106427) 1 NC_007677.1 hypothetical protein 1106427 3851403 SRU_0863 Salinibacter ruber DSM 13855 hypothetical protein YP_444997.1 1106335 R 309807 CDS YP_444998.1 83815104 3850514 complement(1106637..1107467) 1 NC_007677.1 identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198; 6-phosphogluconolactonase 1107467 pgl 3850514 pgl Salinibacter ruber DSM 13855 6-phosphogluconolactonase YP_444998.1 1106637 R 309807 CDS YP_444999.1 83815466 3853060 complement(1107483..1108451) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1108451 3853060 SRU_0865 Salinibacter ruber DSM 13855 sensor histidine kinase YP_444999.1 1107483 R 309807 CDS YP_445000.1 83814505 3852442 complement(1108670..1109416) 1 NC_007677.1 identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase family 1109416 3852442 SRU_0866 Salinibacter ruber DSM 13855 GlcNAc-PI de-N-acetylase family YP_445000.1 1108670 R 309807 CDS YP_445001.1 83814918 3850970 complement(1109524..1109736) 1 NC_007677.1 hypothetical protein 1109736 3850970 SRU_0867 Salinibacter ruber DSM 13855 hypothetical protein YP_445001.1 1109524 R 309807 CDS YP_445002.1 83815755 3852763 complement(1109764..1110708) 1 NC_007677.1 identified by match to protein family HMM PF01497; periplasmic binding protein 1110708 3852763 SRU_0868 Salinibacter ruber DSM 13855 periplasmic binding protein YP_445002.1 1109764 R 309807 CDS YP_445003.1 83815547 3852220 complement(1110730..1111272) 1 NC_007677.1 hypothetical protein 1111272 3852220 SRU_0869 Salinibacter ruber DSM 13855 hypothetical protein YP_445003.1 1110730 R 309807 CDS YP_445004.1 83816331 3851958 complement(1111328..1112524) 1 NC_007677.1 hypothetical protein 1112524 3851958 SRU_0870 Salinibacter ruber DSM 13855 hypothetical protein YP_445004.1 1111328 R 309807 CDS YP_445005.1 83815304 3852133 complement(1112537..1114513) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; iron compound TonB-dependent receptor 1114513 3852133 SRU_0871 Salinibacter ruber DSM 13855 iron compound TonB-dependent receptor YP_445005.1 1112537 R 309807 CDS YP_445006.1 83816166 3851545 complement(1115180..1115575) 1 NC_007677.1 hypothetical protein 1115575 3851545 SRU_0872 Salinibacter ruber DSM 13855 hypothetical protein YP_445006.1 1115180 R 309807 CDS YP_445007.1 83815334 3852124 1115735..1117741 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory transduction histidine kinase 1117741 3852124 SRU_0873 Salinibacter ruber DSM 13855 sensory transduction histidine kinase YP_445007.1 1115735 D 309807 CDS YP_445008.1 83814744 3851362 complement(1117769..1118617) 1 NC_007677.1 identified by match to protein family HMM PF00561; haloalkane dehalogenase 1118617 3851362 SRU_0874 Salinibacter ruber DSM 13855 haloalkane dehalogenase YP_445008.1 1117769 R 309807 CDS YP_445009.1 83815771 3852154 complement(1118648..1119607) 1 NC_007677.1 DeoR family transcriptional regulator 1119607 3852154 SRU_0875 Salinibacter ruber DSM 13855 DeoR family transcriptional regulator YP_445009.1 1118648 R 309807 CDS YP_445010.1 83814651 3851425 complement(1119685..1120326) 1 NC_007677.1 hypothetical protein 1120326 3851425 SRU_0876 Salinibacter ruber DSM 13855 hypothetical protein YP_445010.1 1119685 R 309807 CDS YP_445011.1 83814936 3851319 complement(1120608..1121309) 1 NC_007677.1 identified by match to protein family HMM TIGR02453; hypothetical protein 1121309 3851319 SRU_0877 Salinibacter ruber DSM 13855 hypothetical protein YP_445011.1 1120608 R 309807 CDS YP_445012.1 83815736 3852744 complement(1121475..1122161) 1 NC_007677.1 hypothetical protein 1122161 3852744 SRU_0878 Salinibacter ruber DSM 13855 hypothetical protein YP_445012.1 1121475 R 309807 CDS YP_445013.1 83815884 3851573 complement(1122233..1123369) 1 NC_007677.1 identified by match to protein family HMM PF03480; match to protein family HMM TIGR01409; extracellular solute-binding protein 1123369 3851573 SRU_0879 Salinibacter ruber DSM 13855 extracellular solute-binding protein YP_445013.1 1122233 R 309807 CDS YP_445014.1 83816647 3852101 complement(1123566..1124291) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF07993; NAD-binding domain-containing protein 1124291 3852101 SRU_0880 Salinibacter ruber DSM 13855 NAD-binding domain-containing protein YP_445014.1 1123566 R 309807 CDS YP_445015.1 83814455 3852196 complement(1124501..1125295) 1 NC_007677.1 hypothetical protein 1125295 3852196 SRU_0881 Salinibacter ruber DSM 13855 hypothetical protein YP_445015.1 1124501 R 309807 CDS YP_445016.1 83815313 3852142 1125454..1126197 1 NC_007677.1 identified by match to protein family HMM PF00588; rRNA methylase 1126197 3852142 SRU_0882 Salinibacter ruber DSM 13855 rRNA methylase YP_445016.1 1125454 D 309807 CDS YP_445017.1 83814665 3852250 complement(1126231..1128612) 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1128612 3852250 SRU_0883 Salinibacter ruber DSM 13855 hypothetical protein YP_445017.1 1126231 R 309807 CDS YP_445018.1 83815307 3852136 1129132..1130415 1 NC_007677.1 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B 1130415 sun 3852136 sun Salinibacter ruber DSM 13855 ribosomal RNA small subunit methyltransferase B YP_445018.1 1129132 D 309807 CDS YP_445019.1 83815594 3850775 1130601..1131653 1 NC_007677.1 hypothetical protein 1131653 3850775 SRU_0885 Salinibacter ruber DSM 13855 hypothetical protein YP_445019.1 1130601 D 309807 CDS YP_445020.1 83814864 3851404 complement(1131729..1132292) 1 NC_007677.1 hypothetical protein 1132292 3851404 SRU_0886 Salinibacter ruber DSM 13855 hypothetical protein YP_445020.1 1131729 R 309807 CDS YP_445021.1 83816142 3850544 1134702..1135658 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM TIGR02249; integron integrase subfamily protein 1135658 3850544 SRU_0887 Salinibacter ruber DSM 13855 integron integrase subfamily protein YP_445021.1 1134702 D 309807 CDS YP_445022.1 83816597 3853127 complement(1135781..1137853) 1 NC_007677.1 identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; NAD-dependent DNA ligase 1137853 ligA 3853127 ligA Salinibacter ruber DSM 13855 NAD-dependent DNA ligase YP_445022.1 1135781 R 309807 CDS YP_445023.1 83814110 3850923 1138111..1138953 1 NC_007677.1 hypothetical protein 1138953 3850923 SRU_0889 Salinibacter ruber DSM 13855 hypothetical protein YP_445023.1 1138111 D 309807 CDS YP_445024.1 83814851 3852788 1139241..1142801 1 NC_007677.1 identified by match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC 1142801 smc 3852788 smc Salinibacter ruber DSM 13855 chromosome segregation protein SMC YP_445024.1 1139241 D 309807 CDS YP_445025.1 83816031 3851683 1142856..1143971 1 NC_007677.1 identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 1143971 3851683 SRU_0891 Salinibacter ruber DSM 13855 small conductance mechanosensitive ion channel (MscS) family protein YP_445025.1 1142856 D 309807 CDS YP_445026.1 83816813 3851123 complement(1144102..1145556) 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 1145556 3851123 SRU_0892 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_445026.1 1144102 R 309807 CDS YP_445027.1 83816828 3851138 1146515..1149280 1 NC_007677.1 hypothetical protein 1149280 3851138 SRU_0893 Salinibacter ruber DSM 13855 hypothetical protein YP_445027.1 1146515 D 309807 CDS YP_445028.1 83814887 3851309 complement(1149314..1150462) 1 NC_007677.1 identified by match to protein family HMM PF00144; beta-lactamase 1150462 3851309 SRU_0894 Salinibacter ruber DSM 13855 beta-lactamase YP_445028.1 1149314 R 309807 CDS YP_445029.1 83815521 3852331 1150913..1152739 1 NC_007677.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 1152739 ggt 3852331 ggt Salinibacter ruber DSM 13855 gamma-glutamyltransferase YP_445029.1 1150913 D 309807 CDS YP_445030.1 83816712 3850829 1152965..1153267 1 NC_007677.1 hypothetical protein 1153267 3850829 SRU_0896 Salinibacter ruber DSM 13855 hypothetical protein YP_445030.1 1152965 D 309807 CDS YP_445031.1 83816100 3850580 complement(1153321..1155021) 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1155021 purF 3850580 purF Salinibacter ruber DSM 13855 amidophosphoribosyltransferase YP_445031.1 1153321 R 309807 CDS YP_445032.1 83815140 3852947 complement(1155106..1155402) 1 NC_007677.1 hypothetical protein 1155402 3852947 SRU_0898 Salinibacter ruber DSM 13855 hypothetical protein YP_445032.1 1155106 R 309807 CDS YP_445033.1 83815195 3851776 complement(1155601..1157124) 1 NC_007677.1 identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter 1157124 3851776 SRU_0899 Salinibacter ruber DSM 13855 sodium- and chloride-dependent transporter YP_445033.1 1155601 R 309807 CDS YP_445034.1 83814415 3852999 complement(1157131..1158633) 1 NC_007677.1 identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter 1158633 3852999 SRU_0900 Salinibacter ruber DSM 13855 sodium- and chloride-dependent transporter YP_445034.1 1157131 R 309807 CDS YP_445035.1 83816821 3851131 complement(1158703..1158951) 1 NC_007677.1 hypothetical protein 1158951 3851131 SRU_0901 Salinibacter ruber DSM 13855 hypothetical protein YP_445035.1 1158703 R 309807 CDS YP_445036.1 83816310 3851937 complement(1158965..1160188) 1 NC_007677.1 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; alanine dehydrogenase 1160188 ald 3851937 ald Salinibacter ruber DSM 13855 alanine dehydrogenase YP_445036.1 1158965 R 309807 CDS YP_445037.1 83815088 3850498 1160448..1161368 1 NC_007677.1 identified by match to protein family HMM PF03446; match to protein family HMM PF03807; NADP oxidoreductase coenzyme F420-dependent superfamily protein 1161368 3850498 SRU_0903 Salinibacter ruber DSM 13855 NADP oxidoreductase coenzyme F420-dependent superfamily protein YP_445037.1 1160448 D 309807 CDS YP_445038.1 83814182 3850859 1161509..1162177 1 NC_007677.1 hypothetical protein 1162177 3850859 SRU_0904 Salinibacter ruber DSM 13855 hypothetical protein YP_445038.1 1161509 D 309807 CDS YP_445039.1 83816690 3852691 1162313..1163857 1 NC_007677.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase 1163857 lysS 3852691 lysS Salinibacter ruber DSM 13855 lysyl-tRNA synthetase YP_445039.1 1162313 D 309807 CDS YP_445040.1 83815923 3850421 complement(1164139..1165110) 1 NC_007677.1 identified by match to protein family HMM PF00691; match to protein family HMM PF00801; hypothetical protein 1165110 3850421 SRU_0906 Salinibacter ruber DSM 13855 hypothetical protein YP_445040.1 1164139 R 309807 CDS YP_445041.1 83815472 3853066 complement(1165441..1165761) 1 NC_007677.1 identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 1165761 rpsT 3853066 rpsT Salinibacter ruber DSM 13855 30S ribosomal protein S20 YP_445041.1 1165441 R 309807 CDS YP_445042.1 83816467 3852834 1166105..1166887 1 NC_007677.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1166887 3852834 SRU_0908 Salinibacter ruber DSM 13855 M24/M37 family peptidase YP_445042.1 1166105 D 309807 CDS YP_445043.1 83814458 3852199 1166938..1167438 1 NC_007677.1 identified by match to protein family HMM PF04519; hypothetical protein 1167438 3852199 SRU_0909 Salinibacter ruber DSM 13855 hypothetical protein YP_445043.1 1166938 D 309807 CDS YP_445044.1 83815272 3851053 1168080..1168325 1 NC_007677.1 hypothetical protein 1168325 3851053 SRU_0910 Salinibacter ruber DSM 13855 hypothetical protein YP_445044.1 1168080 D 309807 CDS YP_445045.1 83816026 3851678 1168377..1169615 1 NC_007677.1 identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0 subunit A 1169615 3851678 SRU_0911 Salinibacter ruber DSM 13855 ATP synthase F0 subunit A YP_445045.1 1168377 D 309807 CDS YP_445046.1 83816796 3851224 1169715..1169945 1 NC_007677.1 identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 1169945 atpE 3851224 atpE Salinibacter ruber DSM 13855 ATP synthase F0 subunit C YP_445046.1 1169715 D 309807 CDS YP_445047.1 83815076 3852372 1170146..1170760 1 NC_007677.1 identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B 1170760 atpF 3852372 atpF Salinibacter ruber DSM 13855 ATP synthase F0 subunit B YP_445047.1 1170146 D 309807 CDS YP_445048.1 83815762 3852770 1170818..1171390 1 NC_007677.1 identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 1171390 atpH 3852770 atpH Salinibacter ruber DSM 13855 ATP synthase F1 subunit delta YP_445048.1 1170818 D 309807 CDS YP_445049.1 83814474 3851793 1171450..1173105 1 NC_007677.1 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 1173105 atpA 3851793 atpA Salinibacter ruber DSM 13855 ATP synthase F1 subunit alpha YP_445049.1 1171450 D 309807 CDS YP_445050.1 83814517 3852454 1173258..1174184 1 NC_007677.1 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 1174184 atpG 3852454 atpG Salinibacter ruber DSM 13855 ATP synthase F1 subunit gamma YP_445050.1 1173258 D 309807 CDS YP_445051.1 83815030 3852619 1174474..1175940 1 NC_007677.1 identified by match to protein family HMM PF01370; nucleoside-diphosphate-sugar epimerase 1175940 3852619 SRU_0918 Salinibacter ruber DSM 13855 nucleoside-diphosphate-sugar epimerase YP_445051.1 1174474 D 309807 CDS YP_445052.1 83814185 3850862 1176005..1177270 1 NC_007677.1 deoxyribonuclease 1177270 3850862 SRU_0919 Salinibacter ruber DSM 13855 deoxyribonuclease YP_445052.1 1176005 D 309807 CDS YP_445053.1 83816737 3852544 complement(1177308..1178528) 1 NC_007677.1 identified by match to protein family HMM PF01244; dipeptidase 1178528 3852544 SRU_0920 Salinibacter ruber DSM 13855 dipeptidase YP_445053.1 1177308 R 309807 CDS YP_445054.1 83816122 3850524 complement(1178594..1179400) 1 NC_007677.1 identified by match to protein family HMM PF01497; Fe3+-siderophores ABC transporter 1179400 fecB 3850524 fecB Salinibacter ruber DSM 13855 Fe3+-siderophores ABC transporter YP_445054.1 1178594 R 309807 CDS YP_445055.1 83816406 3851746 1179536..1180606 1 NC_007677.1 identified by match to protein family HMM PF01717; hypothetical protein 1180606 3851746 SRU_0922 Salinibacter ruber DSM 13855 hypothetical protein YP_445055.1 1179536 D 309807 CDS YP_445056.1 83815787 3852170 complement(1180608..1182083) 1 NC_007677.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1182083 mpl 3852170 mpl Salinibacter ruber DSM 13855 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_445056.1 1180608 R 309807 CDS YP_445057.1 83814823 3852389 complement(1182115..1183302) 1 NC_007677.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; hypothetical protein 1183302 3852389 SRU_0924 Salinibacter ruber DSM 13855 hypothetical protein YP_445057.1 1182115 R 309807 CDS YP_445058.1 83814320 3851523 complement(1183618..1187544) 1 NC_007677.1 identified by match to protein family HMM PF00873; multidrug resistance protein 1187544 3851523 SRU_0925 Salinibacter ruber DSM 13855 multidrug resistance protein YP_445058.1 1183618 R 309807 CDS YP_445059.1 83814963 3851269 complement(1187630..1188832) 1 NC_007677.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 1188832 3851269 SRU_0926 Salinibacter ruber DSM 13855 RND family efflux transporter MFP subunit YP_445059.1 1187630 R 309807 CDS YP_445060.1 83815589 3850770 complement(1188889..1190631) 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 1190631 3850770 SRU_0927 Salinibacter ruber DSM 13855 outer membrane efflux protein YP_445060.1 1188889 R 309807 CDS YP_445061.1 83815317 3852146 complement(1190609..1191310) 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1191310 3852146 SRU_0928 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_445061.1 1190609 R 309807 CDS YP_445062.1 83815581 3850762 complement(1191565..1193064) 1 NC_007677.1 identified by match to protein family HMM PF03109; ABC1 family protein 1193064 3850762 SRU_0929 Salinibacter ruber DSM 13855 ABC1 family protein YP_445062.1 1191565 R 309807 CDS YP_445063.1 83816362 3851858 complement(1193064..1193654) 1 NC_007677.1 hypothetical protein 1193654 3851858 SRU_0930 Salinibacter ruber DSM 13855 hypothetical protein YP_445063.1 1193064 R 309807 CDS YP_445064.1 83814344 3851391 complement(1193882..1195498) 1 NC_007677.1 identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase 1195498 3851391 SRU_0931 Salinibacter ruber DSM 13855 thiosulfate sulfurtransferase YP_445064.1 1193882 R 309807 CDS YP_445065.1 83815896 3851586 complement(1195676..1196107) 1 NC_007677.1 identified by match to protein family HMM PF02629; CoA-binding domain-containing protein 1196107 3851586 SRU_0932 Salinibacter ruber DSM 13855 CoA-binding domain-containing protein YP_445065.1 1195676 R 309807 CDS YP_445066.1 83816700 3850817 1196295..1198886 1 NC_007677.1 identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 1198886 leuS 3850817 leuS Salinibacter ruber DSM 13855 leucyl-tRNA synthetase YP_445066.1 1196295 D 309807 CDS YP_445067.1 83814572 3852961 1199008..1199766 1 NC_007677.1 identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase family 1199766 3852961 SRU_0934 Salinibacter ruber DSM 13855 GlcNAc-PI de-N-acetylase family YP_445067.1 1199008 D 309807 CDS YP_445068.1 83814210 3850651 1199939..1200517 1 NC_007677.1 identified by match to protein family HMM PF01132; match to protein family HMM TIGR00038; translation elongation factor P 1200517 efp 3850651 efp Salinibacter ruber DSM 13855 translation elongation factor P YP_445068.1 1199939 D 309807 CDS YP_445069.1 83815926 3850424 1200563..1201192 1 NC_007677.1 identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1201192 accB 3850424 accB Salinibacter ruber DSM 13855 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_445069.1 1200563 D 309807 CDS YP_445070.1 83815447 3850744 1201349..1202824 1 NC_007677.1 identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 1202824 accC 3850744 accC Salinibacter ruber DSM 13855 acetyl-CoA carboxylase, biotin carboxylase YP_445070.1 1201349 D 309807 CDS YP_445071.1 83816003 3851655 1202963..1204177 1 NC_007677.1 identified by match to protein family HMM PF00155; match to protein family HMM PF01212; aspartate aminotransferase 1204177 3851655 SRU_0938 Salinibacter ruber DSM 13855 aspartate aminotransferase YP_445071.1 1202963 D 309807 CDS YP_445072.1 83815374 3850670 1204241..1205488 1 NC_007677.1 identified by match to protein family HMM PF02163; peptidase, M50 family protein 1205488 3850670 SRU_0939 Salinibacter ruber DSM 13855 peptidase, M50 family protein YP_445072.1 1204241 D 309807 CDS YP_445073.1 83814074 3852478 1205575..1206108 1 NC_007677.1 hypothetical protein 1206108 3852478 SRU_0940 Salinibacter ruber DSM 13855 hypothetical protein YP_445073.1 1205575 D 309807 CDS YP_445074.1 83816281 3852043 1206276..1207721 1 NC_007677.1 hypothetical protein 1207721 3852043 SRU_0941 Salinibacter ruber DSM 13855 hypothetical protein YP_445074.1 1206276 D 309807 CDS YP_445075.1 83815680 3851017 1207859..1208836 1 NC_007677.1 hypothetical protein 1208836 3851017 SRU_0942 Salinibacter ruber DSM 13855 hypothetical protein YP_445075.1 1207859 D 309807 CDS YP_445076.1 83815027 3852439 complement(1208870..1209667) 1 NC_007677.1 hypothetical protein 1209667 3852439 SRU_0943 Salinibacter ruber DSM 13855 hypothetical protein YP_445076.1 1208870 R 309807 CDS YP_445077.1 83816557 3851901 complement(1209758..1212277) 1 NC_007677.1 identified by match to protein family HMM PF00326; acylaminoacyl-peptidase 1212277 3851901 SRU_0944 Salinibacter ruber DSM 13855 acylaminoacyl-peptidase YP_445077.1 1209758 R 309807 CDS YP_445078.1 83816536 3852010 complement(1212414..1213208) 1 NC_007677.1 hypothetical protein 1213208 3852010 SRU_0945 Salinibacter ruber DSM 13855 hypothetical protein YP_445078.1 1212414 R 309807 CDS YP_445079.1 83814177 3850854 1213214..1213990 1 NC_007677.1 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 1213990 3850854 SRU_0946 Salinibacter ruber DSM 13855 alpha/beta fold family hydrolase YP_445079.1 1213214 D 309807 CDS YP_445080.1 83816091 3850571 1214066..1214869 1 NC_007677.1 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 1214869 3850571 SRU_0947 Salinibacter ruber DSM 13855 short chain dehydrogenase/reductase family oxidoreductase YP_445080.1 1214066 D 309807 CDS YP_445081.1 83814067 3852471 complement(1215123..1216127) 1 NC_007677.1 alpha/beta hydrolase 1216127 3852471 SRU_0948 Salinibacter ruber DSM 13855 alpha/beta hydrolase YP_445081.1 1215123 R 309807 CDS YP_445082.1 83814553 3850801 complement(1216622..1217371) 1 NC_007677.1 identified by match to protein family HMM PF00929; exonuclease 1217371 3850801 SRU_0950 Salinibacter ruber DSM 13855 exonuclease YP_445082.1 1216622 R 309807 CDS YP_445083.1 83815228 3851029 1217298..1218980 1 NC_007677.1 identified by match to protein family HMM PF00144; beta-lactamase 1218980 3851029 SRU_0951 Salinibacter ruber DSM 13855 beta-lactamase YP_445083.1 1217298 D 309807 CDS YP_445084.1 83816502 3851975 complement(1219067..1219537) 1 NC_007677.1 hypothetical protein 1219537 3851975 SRU_0952 Salinibacter ruber DSM 13855 hypothetical protein YP_445084.1 1219067 R 309807 CDS YP_445085.1 83814470 3851789 complement(1219562..1220401) 1 NC_007677.1 identified by match to protein family HMM PF01656; ParA family protein 1220401 3851789 SRU_0953 Salinibacter ruber DSM 13855 ParA family protein YP_445085.1 1219562 R 309807 CDS YP_445086.1 83814898 3852347 complement(1220450..1221769) 1 NC_007677.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1221769 3852347 SRU_0954 Salinibacter ruber DSM 13855 endonuclease/exonuclease/phosphatase family protein YP_445086.1 1220450 R 309807 CDS YP_445087.1 83816805 3851233 1221778..1222332 1 NC_007677.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1222332 folK 3851233 folK Salinibacter ruber DSM 13855 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_445087.1 1221778 D 309807 CDS YP_445088.1 83816359 3851855 1222286..1223071 1 NC_007677.1 identified by match to protein family HMM PF01712; deoxyguanosine kinase/deoxyadenosine kinase subunit 1223071 dck 3851855 dck Salinibacter ruber DSM 13855 deoxyguanosine kinase/deoxyadenosine kinase subunit YP_445088.1 1222286 D 309807 CDS YP_445089.1 83814129 3851116 1223117..1223386 1 NC_007677.1 hypothetical protein 1223386 3851116 SRU_0957 Salinibacter ruber DSM 13855 hypothetical protein YP_445089.1 1223117 D 309807 CDS YP_445090.1 83815149 3850383 complement(1223400..1224302) 1 NC_007677.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein 1224302 3850383 SRU_0958 Salinibacter ruber DSM 13855 TonB family protein YP_445090.1 1223400 R 309807 CDS YP_445091.1 83815752 3852760 1224443..1225603 1 NC_007677.1 identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; carbamoyl-phosphate synthase small subunit 1225603 carA 3852760 carA Salinibacter ruber DSM 13855 carbamoyl-phosphate synthase small subunit YP_445091.1 1224443 D 309807 CDS YP_445092.1 83816722 3850839 1225724..1228552 1 NC_007677.1 identified by match to protein family HMM PF00289; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 1228552 carB 3850839 carB Salinibacter ruber DSM 13855 carbamoyl-phosphate synthase large subunit YP_445092.1 1225724 D 309807 CDS YP_445093.1 83815010 3853049 1229806..1230489 1 NC_007677.1 identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164; phosphatidylserine decarboxylase 1230489 3853049 SRU_0961 Salinibacter ruber DSM 13855 phosphatidylserine decarboxylase YP_445093.1 1229806 D 309807 CDS YP_445094.1 83814126 3851113 1230650..1231381 1 NC_007677.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; phosphatidylserine synthase 1231381 3851113 SRU_0962 Salinibacter ruber DSM 13855 phosphatidylserine synthase YP_445094.1 1230650 D 309807 CDS YP_445095.1 83816174 3851553 1231437..1231715 1 NC_007677.1 identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine (FGAM) synthase 1231715 purS 3851553 purS Salinibacter ruber DSM 13855 phosphoribosylformylglycinamidine (FGAM) synthase YP_445095.1 1231437 D 309807 CDS YP_445096.1 83815654 3850991 1231790..1232137 1 NC_007677.1 identified by match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS 1232137 3850991 SRU_0964 Salinibacter ruber DSM 13855 ATP-dependent Clp protease adaptor protein ClpS YP_445096.1 1231790 D 309807 CDS YP_445097.1 83815573 3850753 complement(1232154..1233299) 1 NC_007677.1 hypothetical protein 1233299 3850753 SRU_0965 Salinibacter ruber DSM 13855 hypothetical protein YP_445097.1 1232154 R 309807 CDS YP_445098.1 83815315 3852144 1233640..1233849 1 NC_007677.1 identified by match to protein family HMM PF00313; cold-shock DNA-binding domain-containing protein 1233849 3852144 SRU_0966 Salinibacter ruber DSM 13855 cold-shock DNA-binding domain-containing protein YP_445098.1 1233640 D 309807 CDS YP_445099.1 83814694 3853102 complement(1234365..1234577) 1 NC_007677.1 hypothetical protein 1234577 3853102 SRU_0967 Salinibacter ruber DSM 13855 hypothetical protein YP_445099.1 1234365 R 309807 CDS YP_445100.1 83814374 3851245 1234767..1234967 1 NC_007677.1 hypothetical protein 1234967 3851245 SRU_0968 Salinibacter ruber DSM 13855 hypothetical protein YP_445100.1 1234767 D 309807 CDS YP_445101.1 83815870 3852528 complement(1235119..1235961) 1 NC_007677.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1235961 dapD 3852528 dapD Salinibacter ruber DSM 13855 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_445101.1 1235119 R 309807 CDS YP_445102.1 83814662 3852247 1236378..1238345 1 NC_007677.1 identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase 1238345 dnaG 3852247 dnaG Salinibacter ruber DSM 13855 DNA primase YP_445102.1 1236378 D 309807 CDS YP_445103.1 83816176 3851555 complement(1238379..1240220) 1 NC_007677.1 hypothetical protein 1240220 3851555 SRU_0971 Salinibacter ruber DSM 13855 hypothetical protein YP_445103.1 1238379 R 309807 CDS YP_445104.1 83815868 3852526 complement(1240266..1240964) 1 NC_007677.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 1240964 3852526 SRU_0972 Salinibacter ruber DSM 13855 glutamine amidotransferase YP_445104.1 1240266 R 309807 CDS YP_445105.1 83815224 3851025 complement(1241066..1241584) 1 NC_007677.1 hypothetical protein 1241584 3851025 SRU_0973 Salinibacter ruber DSM 13855 hypothetical protein YP_445105.1 1241066 R 309807 CDS YP_445106.1 83815008 3853047 complement(1241850..1242311) 1 NC_007677.1 identified by match to protein family HMM PF04434; SWIM zinc finger domain-containing protein 1242311 3853047 SRU_0974 Salinibacter ruber DSM 13855 SWIM zinc finger domain-containing protein YP_445106.1 1241850 R 309807 CDS YP_445107.1 83815170 3850365 complement(1242334..1243071) 1 NC_007677.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07685; GMP synthase 1243071 guaA 3850365 guaA Salinibacter ruber DSM 13855 GMP synthase YP_445107.1 1242334 R 309807 CDS YP_445108.1 83816518 3851992 1243338..1244819 1 NC_007677.1 hypothetical protein 1244819 3851992 SRU_0976 Salinibacter ruber DSM 13855 hypothetical protein YP_445108.1 1243338 D 309807 CDS YP_445109.1 83814149 3850942 1244825..1246498 1 NC_007677.1 hypothetical protein 1246498 3850942 SRU_0977 Salinibacter ruber DSM 13855 hypothetical protein YP_445109.1 1244825 D 309807 CDS YP_445110.1 83814163 3850486 1246611..1246934 1 NC_007677.1 hypothetical protein 1246934 3850486 SRU_0978 Salinibacter ruber DSM 13855 hypothetical protein YP_445110.1 1246611 D 309807 CDS YP_445111.1 83814834 3852400 complement(1247212..1250712) 1 NC_007677.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1250712 dnaE 3852400 dnaE Salinibacter ruber DSM 13855 DNA polymerase III subunit alpha YP_445111.1 1247212 R 309807 CDS YP_445112.1 83816131 3850533 complement(1250984..1252126) 1 NC_007677.1 xylose isomerase 1252126 3850533 SRU_0980 Salinibacter ruber DSM 13855 xylose isomerase YP_445112.1 1250984 R 309807 CDS YP_445113.1 83816789 3851217 complement(1252129..1253745) 1 NC_007677.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase 1253745 3851217 SRU_0981 Salinibacter ruber DSM 13855 carbohydrate kinase YP_445113.1 1252129 R 309807 CDS YP_445114.1 83814552 3850800 complement(1253742..1255340) 1 NC_007677.1 identified by match to protein family HMM PF05684; hypothetical protein 1255340 3850800 SRU_0982 Salinibacter ruber DSM 13855 hypothetical protein YP_445114.1 1253742 R 309807 CDS YP_445115.1 83815415 3852990 1255447..1257435 1 NC_007677.1 hypothetical protein 1257435 3852990 SRU_0983 Salinibacter ruber DSM 13855 hypothetical protein YP_445115.1 1255447 D 309807 CDS YP_445116.1 83816121 3850523 complement(1257439..1258266) 1 NC_007677.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1258266 lgt 3850523 lgt Salinibacter ruber DSM 13855 prolipoprotein diacylglyceryl transferase YP_445116.1 1257439 R 309807 CDS YP_445117.1 83815126 3852933 1258424..1258786 1 NC_007677.1 citrate synthase family protein 1258786 3852933 SRU_0985 Salinibacter ruber DSM 13855 citrate synthase family protein YP_445117.1 1258424 D 309807 CDS YP_445118.1 83816551 3851895 complement(1258846..1260534) 1 NC_007677.1 identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginyl-tRNA synthetase 1260534 argS 3851895 argS Salinibacter ruber DSM 13855 arginyl-tRNA synthetase YP_445118.1 1258846 R 309807 CDS YP_445119.1 83814336 3851383 1261234..1261554 1 NC_007677.1 identified by match to protein family HMM PF07883; pectin degradation protein 1261554 3851383 SRU_0987 Salinibacter ruber DSM 13855 pectin degradation protein YP_445119.1 1261234 D 309807 CDS YP_445120.1 83814895 3852344 1261639..1263009 1 NC_007677.1 identified by match to protein family HMM PF00004; recombination factor protein RarA 1263009 3852344 SRU_0988 Salinibacter ruber DSM 13855 recombination factor protein RarA YP_445120.1 1261639 D 309807 CDS YP_445121.1 83815495 3852305 1263433..1264419 1 NC_007677.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1264419 3852305 SRU_0989 Salinibacter ruber DSM 13855 rhodanese-like domain-containing protein YP_445121.1 1263433 D 309807 CDS YP_445122.1 83815733 3852741 1264603..1265166 1 NC_007677.1 identified by match to protein family HMM PF04290; TRAP transporter DctQ-like membrane protein 1265166 3852741 SRU_0990 Salinibacter ruber DSM 13855 TRAP transporter DctQ-like membrane protein YP_445122.1 1264603 D 309807 CDS YP_445123.1 83816355 3851851 1265353..1266699 1 NC_007677.1 identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786; TRAP transporter DctM family protein 1266699 3851851 SRU_0991 Salinibacter ruber DSM 13855 TRAP transporter DctM family protein YP_445123.1 1265353 D 309807 CDS YP_445124.1 83816804 3851232 complement(1266718..1268415) 1 NC_007677.1 hypothetical protein 1268415 3851232 SRU_0992 Salinibacter ruber DSM 13855 hypothetical protein YP_445124.1 1266718 R 309807 CDS YP_445125.1 83816206 3851819 1269068..1269910 1 NC_007677.1 hypothetical protein 1269910 3851819 SRU_0993 Salinibacter ruber DSM 13855 hypothetical protein YP_445125.1 1269068 D 309807 CDS YP_445126.1 83816162 3851541 1270179..1270823 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 1270823 3851541 SRU_0995 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein YP_445126.1 1270179 D 309807 CDS YP_445127.1 83816326 3851953 complement(1270820..1271737) 1 NC_007677.1 identified by match to protein family HMM PF00685; deacetylase 1271737 3851953 SRU_0994 Salinibacter ruber DSM 13855 deacetylase YP_445127.1 1270820 R 309807 CDS YP_445128.1 83815662 3850999 complement(1271668..1272561) 1 NC_007677.1 hypothetical protein 1272561 3850999 SRU_0996 Salinibacter ruber DSM 13855 hypothetical protein YP_445128.1 1271668 R 309807 CDS YP_445129.1 83814097 3850910 1272622..1275306 1 NC_007677.1 hypothetical protein 1275306 3850910 SRU_0997 Salinibacter ruber DSM 13855 hypothetical protein YP_445129.1 1272622 D 309807 CDS YP_445130.1 83816538 3852012 1275465..1276667 1 NC_007677.1 hypothetical protein 1276667 3852012 SRU_0998 Salinibacter ruber DSM 13855 hypothetical protein YP_445130.1 1275465 D 309807 CDS YP_445131.1 83815937 3850435 1276907..1278625 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1278625 3850435 SRU_0999 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445131.1 1276907 D 309807 CDS YP_445132.1 83814450 3852191 1278671..1279510 1 NC_007677.1 identified by match to protein family HMM PF00685; sulfotransferase protein 1279510 3852191 SRU_1000 Salinibacter ruber DSM 13855 sulfotransferase protein YP_445132.1 1278671 D 309807 CDS YP_445133.1 83815250 3853018 complement(1279576..1280520) 1 NC_007677.1 identified by match to protein family HMM PF00535; rhamnosyl transferase 1280520 rfbQ 3853018 rfbQ Salinibacter ruber DSM 13855 rhamnosyl transferase YP_445133.1 1279576 R 309807 CDS YP_445134.1 83815563 3852236 1280800..1281858 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1281858 3852236 SRU_1003 Salinibacter ruber DSM 13855 glycoside hydrolase YP_445134.1 1280800 D 309807 CDS YP_445135.1 83816720 3850837 complement(1281855..1282817) 1 NC_007677.1 identified by match to protein family HMM PF00685; sulfotransferase domain-containing protein 1282817 3850837 SRU_1002 Salinibacter ruber DSM 13855 sulfotransferase domain-containing protein YP_445135.1 1281855 R 309807 CDS YP_445136.1 83814787 3850879 complement(1282858..1283850) 1 NC_007677.1 sulfotransferase protein 1283850 3850879 SRU_1004 Salinibacter ruber DSM 13855 sulfotransferase protein YP_445136.1 1282858 R 309807 CDS YP_445137.1 83814154 3850477 1284744..1285817 1 NC_007677.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH domain-containing protein 1285817 3850477 SRU_1005 Salinibacter ruber DSM 13855 DHH domain-containing protein YP_445137.1 1284744 D 309807 CDS YP_445138.1 83815950 3850448 1285887..1287095 1 NC_007677.1 identified by match to protein family HMM PF04166; match to protein family HMM TIGR00557; 4-hydroxythreonine-4-phosphate dehydrogenase 1287095 pdxA 3850448 pdxA Salinibacter ruber DSM 13855 4-hydroxythreonine-4-phosphate dehydrogenase YP_445138.1 1285887 D 309807 CDS YP_445139.1 83815253 3853021 1287126..1287929 1 NC_007677.1 identified by match to protein family HMM PF00005; cell-division ATP-binding protein 1287929 ftsE 3853021 ftsE Salinibacter ruber DSM 13855 cell-division ATP-binding protein YP_445139.1 1287126 D 309807 CDS YP_445140.1 83814664 3852249 1288224..1289063 1 NC_007677.1 hypothetical protein 1289063 3852249 SRU_1008 Salinibacter ruber DSM 13855 hypothetical protein YP_445140.1 1288224 D 309807 CDS YP_445141.1 83816523 3851997 complement(1289126..1289737) 1 NC_007677.1 hypothetical protein 1289737 3851997 SRU_1009 Salinibacter ruber DSM 13855 hypothetical protein YP_445141.1 1289126 R 309807 CDS YP_445142.1 83815716 3850623 1290315..1290638 1 NC_007677.1 hypothetical protein 1290638 3850623 SRU_1010 Salinibacter ruber DSM 13855 hypothetical protein YP_445142.1 1290315 D 309807 CDS YP_445143.1 83815537 3852210 1290888..1292258 1 NC_007677.1 identified by match to protein family HMM PF00082; intracellular alkaline serine proteinase 1292258 3852210 SRU_1011 Salinibacter ruber DSM 13855 intracellular alkaline serine proteinase YP_445143.1 1290888 D 309807 CDS YP_445144.1 83815106 3850516 complement(1292599..1293117) 1 NC_007677.1 hypothetical protein 1293117 3850516 SRU_1012 Salinibacter ruber DSM 13855 hypothetical protein YP_445144.1 1292599 R 309807 CDS YP_445145.1 83814690 3853098 complement(1293212..1294234) 1 NC_007677.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1294234 hemB 3853098 hemB Salinibacter ruber DSM 13855 delta-aminolevulinic acid dehydratase YP_445145.1 1293212 R 309807 CDS YP_445146.1 83815337 3852127 complement(1294327..1296036) 1 NC_007677.1 identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase 1296036 cysS 3852127 cysS Salinibacter ruber DSM 13855 cysteinyl-tRNA synthetase YP_445146.1 1294327 R 309807 CDS YP_445147.1 83815825 3851631 complement(1296037..1296393) 1 NC_007677.1 ArsR family transcriptional regulator 1296393 3851631 SRU_1015 Salinibacter ruber DSM 13855 ArsR family transcriptional regulator YP_445147.1 1296037 R 309807 CDS YP_445148.1 83815724 3850631 complement(1296386..1297150) 1 NC_007677.1 hypothetical protein 1297150 3850631 SRU_1016 Salinibacter ruber DSM 13855 hypothetical protein YP_445148.1 1296386 R 309807 CDS YP_445149.1 83816498 3852867 complement(1297220..1297591) 1 NC_007677.1 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 1297591 3852867 SRU_1017 Salinibacter ruber DSM 13855 hypothetical protein YP_445149.1 1297220 R 309807 CDS YP_445150.1 83814100 3850913 1297627..1298010 1 NC_007677.1 identified by match to protein family HMM PF01502; phosphoribosyl-AMP cyclohydrolase domain-containing protein 1298010 3850913 SRU_1018 Salinibacter ruber DSM 13855 phosphoribosyl-AMP cyclohydrolase domain-containing protein YP_445150.1 1297627 D 309807 CDS YP_445151.1 83814879 3851301 complement(1298013..1299449) 1 NC_007677.1 identified by match to protein family HMM PF00474; proline permease 1299449 3851301 SRU_1019 Salinibacter ruber DSM 13855 proline permease YP_445151.1 1298013 R 309807 CDS YP_445152.1 83816149 3850551 complement(1299662..1300132) 1 NC_007677.1 RNA methylase family protein 1300132 3850551 SRU_1020 Salinibacter ruber DSM 13855 RNA methylase family protein YP_445152.1 1299662 R 309807 CDS YP_445153.1 83816649 3852103 complement(1300333..1301694) 1 NC_007677.1 identified by match to protein family HMM PF00324; amino acid permease family protein 1301694 3852103 SRU_1021 Salinibacter ruber DSM 13855 amino acid permease family protein YP_445153.1 1300333 R 309807 CDS YP_445154.1 83814437 3850723 1301960..1302454 1 NC_007677.1 identified by match to protein family HMM PF03073; mitochondrial benzodiazepine receptor/sensory transduction protein 1302454 3850723 SRU_1022 Salinibacter ruber DSM 13855 mitochondrial benzodiazepine receptor/sensory transduction protein YP_445154.1 1301960 D 309807 CDS YP_445155.1 83816711 3850828 complement(1302475..1304004) 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; NAD-dependent epimerase/dehydratase family protein 1304004 3850828 SRU_1023 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein YP_445155.1 1302475 R 309807 CDS YP_445156.1 83815882 3852540 1304529..1305173 1 NC_007677.1 hypothetical protein 1305173 3852540 SRU_1024 Salinibacter ruber DSM 13855 hypothetical protein YP_445156.1 1304529 D 309807 CDS YP_445157.1 83815081 3852377 1305243..1306172 1 NC_007677.1 hypothetical protein 1306172 3852377 SRU_1025 Salinibacter ruber DSM 13855 hypothetical protein YP_445157.1 1305243 D 309807 CDS YP_445158.1 83816667 3852668 1306357..1307532 1 NC_007677.1 identified by match to protein family HMM PF00571; match to protein family HMM PF02163; peptidase, M50 family protein 1307532 3852668 SRU_1026 Salinibacter ruber DSM 13855 peptidase, M50 family protein YP_445158.1 1306357 D 309807 CDS YP_445159.1 83814590 3851070 1307678..1309108 1 NC_007677.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 1309108 pykA 3851070 pykA Salinibacter ruber DSM 13855 pyruvate kinase YP_445159.1 1307678 D 309807 CDS YP_445160.1 83815402 3852977 1309234..1312206 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1312206 3852977 SRU_1028 Salinibacter ruber DSM 13855 hypothetical protein YP_445160.1 1309234 D 309807 CDS YP_445161.1 83816311 3851938 1312243..1314303 1 NC_007677.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protein FtsH 1314303 ftsH 3851938 ftsH Salinibacter ruber DSM 13855 cell division protein FtsH YP_445161.1 1312243 D 309807 CDS YP_445162.2 161986639 3851097 1314697..1315071 1 NC_007677.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1315071 rpsL 3851097 rpsL Salinibacter ruber DSM 13855 30S ribosomal protein S12 YP_445162.2 1314697 D 309807 CDS YP_445163.1 83815057 3851286 1315119..1315592 1 NC_007677.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1315592 rpsG 3851286 rpsG Salinibacter ruber DSM 13855 30S ribosomal protein S7 YP_445163.1 1315119 D 309807 CDS YP_445164.1 83815673 3851010 1315666..1317786 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 1317786 fusA 3851010 fusA Salinibacter ruber DSM 13855 translation elongation factor G YP_445164.1 1315666 D 309807 CDS YP_445165.1 83814995 3853034 1317874..1319064 1 NC_007677.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1319064 tuf 3853034 tuf Salinibacter ruber DSM 13855 elongation factor Tu YP_445165.1 1317874 D 309807 CDS YP_445166.1 83815445 3850742 1319147..1319458 1 NC_007677.1 identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 1319458 rpsJ 3850742 rpsJ Salinibacter ruber DSM 13855 30S ribosomal protein S10 YP_445166.1 1319147 D 309807 CDS YP_445167.1 83816242 3852905 1319991..1320617 1 NC_007677.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1320617 rplC 3852905 rplC Salinibacter ruber DSM 13855 50S ribosomal protein L3 YP_445167.1 1319991 D 309807 CDS YP_445168.1 83814571 3852960 1320691..1321338 1 NC_007677.1 identified by match to protein family HMM PF00573; 50S ribosomal protein L4/L1 family protein 1321338 rplD 3852960 rplD Salinibacter ruber DSM 13855 50S ribosomal protein L4/L1 family protein YP_445168.1 1320691 D 309807 CDS YP_445169.1 83815381 3850893 1321395..1321694 1 NC_007677.1 identified by match to protein family HMM PF00276; 50S ribosomal protein L23 1321694 rplW 3850893 rplW Salinibacter ruber DSM 13855 50S ribosomal protein L23 YP_445169.1 1321395 D 309807 CDS YP_445170.1 83815890 3851579 1321747..1322598 1 NC_007677.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1322598 rplB 3851579 rplB Salinibacter ruber DSM 13855 50S ribosomal protein L2 YP_445170.1 1321747 D 309807 CDS YP_445171.1 83816636 3852090 1322674..1322967 1 NC_007677.1 identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 1322967 rpsS 3852090 rpsS Salinibacter ruber DSM 13855 30S ribosomal protein S19 YP_445171.1 1322674 D 309807 CDS YP_445172.1 83816216 3851829 1323056..1323421 1 NC_007677.1 identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 1323421 rplV 3851829 rplV Salinibacter ruber DSM 13855 50S ribosomal protein L22 YP_445172.1 1323056 D 309807 CDS YP_445173.1 83816111 3850591 1323483..1324193 1 NC_007677.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1324193 rpsC 3850591 rpsC Salinibacter ruber DSM 13855 30S ribosomal protein S3 YP_445173.1 1323483 D 309807 CDS YP_445174.1 83814953 3851336 1324254..1324691 1 NC_007677.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1324691 rplP 3851336 rplP Salinibacter ruber DSM 13855 50S ribosomal protein L16 YP_445174.1 1324254 D 309807 CDS YP_445175.1 83816464 3852831 1324700..1324948 1 NC_007677.1 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 1324948 rpmC 3852831 rpmC Salinibacter ruber DSM 13855 50S ribosomal protein L29 YP_445175.1 1324700 D 309807 CDS YP_445176.1 83814516 3852453 1325009..1325317 1 NC_007677.1 identified by match to protein family HMM PF00366; 30S ribosomal protein S17 1325317 3852453 SRU_1044 Salinibacter ruber DSM 13855 30S ribosomal protein S17 YP_445176.1 1325009 D 309807 CDS YP_445177.1 83815132 3852939 1325402..1325770 1 NC_007677.1 identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 1325770 rplN 3852939 rplN Salinibacter ruber DSM 13855 50S ribosomal protein L14 YP_445177.1 1325402 D 309807 CDS YP_445178.1 83816134 3850536 1325860..1326195 1 NC_007677.1 identified by match to protein family HMM TIGR01079; 50S ribosomal protein L24 1326195 rplX 3850536 rplX Salinibacter ruber DSM 13855 50S ribosomal protein L24 YP_445178.1 1325860 D 309807 CDS YP_445179.1 83816313 3851940 1326329..1326904 1 NC_007677.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1326904 rplE 3851940 rplE Salinibacter ruber DSM 13855 50S ribosomal protein L5 YP_445179.1 1326329 D 309807 CDS YP_445180.1 83816585 3853115 1326979..1327248 1 NC_007677.1 identified by match to protein family HMM PF00253; 30S ribosomal protein S14 1327248 rpS 3853115 rpS Salinibacter ruber DSM 13855 30S ribosomal protein S14 YP_445180.1 1326979 D 309807 CDS YP_445181.1 83815774 3852157 1327342..1327743 1 NC_007677.1 identified by match to protein family HMM PF00410; 30S ribosomal protein S8 1327743 rpsH 3852157 rpsH Salinibacter ruber DSM 13855 30S ribosomal protein S8 YP_445181.1 1327342 D 309807 CDS YP_445182.1 83815164 3850398 1327811..1328365 1 NC_007677.1 identified by match to protein family HMM PF00347; 50S ribosomal protein L6 1328365 rplF 3850398 rplF Salinibacter ruber DSM 13855 50S ribosomal protein L6 YP_445182.1 1327811 D 309807 CDS YP_445183.1 83814539 3852614 1328441..1328800 1 NC_007677.1 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 1328800 rplR 3852614 rplR Salinibacter ruber DSM 13855 50S ribosomal protein L18 YP_445183.1 1328441 D 309807 CDS YP_445184.1 83816356 3851852 1328851..1329378 1 NC_007677.1 identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 1329378 rpsE 3851852 rpsE Salinibacter ruber DSM 13855 30S ribosomal protein S5 YP_445184.1 1328851 D 309807 CDS YP_445185.1 83814159 3850482 1329478..1329978 1 NC_007677.1 identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 1329978 rplO 3850482 rplO Salinibacter ruber DSM 13855 50S ribosomal protein L15 YP_445185.1 1329478 D 309807 CDS YP_445186.1 83814783 3850875 1330035..1331366 1 NC_007677.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1331366 secY 3850875 secY Salinibacter ruber DSM 13855 preprotein translocase subunit SecY YP_445186.1 1330035 D 309807 CDS YP_445187.1 83815728 3852736 1331439..1332263 1 NC_007677.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 1332263 map 3852736 map Salinibacter ruber DSM 13855 methionine aminopeptidase YP_445187.1 1331439 D 309807 CDS YP_445188.1 83814359 3851347 1332263..1332484 1 NC_007677.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00008; translation initiation factor IF-1 1332484 infA 3851347 infA Salinibacter ruber DSM 13855 translation initiation factor IF-1 YP_445188.1 1332263 D 309807 CDS YP_445189.1 83814971 3851277 1332573..1332956 1 NC_007677.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1332956 rpsM 3851277 rpsM Salinibacter ruber DSM 13855 30S ribosomal protein S13 YP_445189.1 1332573 D 309807 CDS YP_445190.1 83815931 3850429 1332972..1333448 1 NC_007677.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1333448 3850429 SRU_1058 Salinibacter ruber DSM 13855 30S ribosomal protein S11 YP_445190.1 1332972 D 309807 CDS YP_445191.1 83816564 3851908 1333558..1334160 1 NC_007677.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1334160 rpsD 3851908 rpsD Salinibacter ruber DSM 13855 30S ribosomal protein S4 YP_445191.1 1333558 D 309807 CDS YP_445192.1 83815189 3851770 1334278..1335243 1 NC_007677.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1335243 rpoA 3851770 rpoA Salinibacter ruber DSM 13855 DNA-directed RNA polymerase subunit alpha YP_445192.1 1334278 D 309807 CDS YP_445193.1 83816079 3850559 1335330..1335923 1 NC_007677.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1335923 rplQ 3850559 rplQ Salinibacter ruber DSM 13855 50S ribosomal protein L17 YP_445193.1 1335330 D 309807 CDS YP_445194.1 83815613 3850676 1336119..1338359 1 NC_007677.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; RelA/SpoT family protein 1338359 spoT 3850676 spoT Salinibacter ruber DSM 13855 RelA/SpoT family protein YP_445194.1 1336119 D 309807 CDS YP_445195.1 83816472 3852839 1338399..1338779 1 NC_007677.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 1338779 hup 3852839 hup Salinibacter ruber DSM 13855 DNA-binding protein HU YP_445195.1 1338399 D 309807 CDS YP_445196.1 83814264 3852493 1338851..1339282 1 NC_007677.1 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein 1339282 3852493 SRU_1064 Salinibacter ruber DSM 13855 hypothetical protein YP_445196.1 1338851 D 309807 CDS YP_445197.1 83814811 3852416 complement(1339301..1340341) 1 NC_007677.1 hypothetical protein 1340341 3852416 SRU_1065 Salinibacter ruber DSM 13855 hypothetical protein YP_445197.1 1339301 R 309807 CDS YP_445198.1 83815803 3852186 complement(1340367..1340906) 1 NC_007677.1 identified by match to protein family HMM PF01230; HIT domain-containing protein 1340906 3852186 SRU_1066 Salinibacter ruber DSM 13855 HIT domain-containing protein YP_445198.1 1340367 R 309807 CDS YP_445199.1 83814693 3853101 1341070..1341903 1 NC_007677.1 identified by similarity to GB:AAM24591.1; match to protein family HMM PF02811; hypothetical protein 1341903 3853101 SRU_1067 Salinibacter ruber DSM 13855 hypothetical protein YP_445199.1 1341070 D 309807 CDS YP_445200.1 83815320 3852110 1341951..1342421 1 NC_007677.1 identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase 1342421 ribE 3852110 ribE Salinibacter ruber DSM 13855 6,7-dimethyl-8-ribityllumazine synthase YP_445200.1 1341951 D 309807 CDS YP_445201.1 83816560 3851904 complement(1342818..1343969) 1 NC_007677.1 hypothetical protein 1343969 3851904 SRU_1071 Salinibacter ruber DSM 13855 hypothetical protein YP_445201.1 1342818 R 309807 CDS YP_445202.1 83815917 3851607 complement(1344014..1344295) 1 NC_007677.1 hypothetical protein 1344295 3851607 SRU_1072 Salinibacter ruber DSM 13855 hypothetical protein YP_445202.1 1344014 R 309807 CDS YP_445203.1 83815714 3850621 1344415..1345134 1 NC_007677.1 competence protein F 1345134 comF 3850621 comF Salinibacter ruber DSM 13855 competence protein F YP_445203.1 1344415 D 309807 CDS YP_445204.1 83815050 3851279 complement(1345191..1345847) 1 NC_007677.1 identified by similarity to SP:Q93P63; match to protein family HMM PF01625; match to protein family HMM TIGR00401; methionine-S-sulfoxide reductase 1345847 msrA 3851279 msrA Salinibacter ruber DSM 13855 methionine-S-sulfoxide reductase YP_445204.1 1345191 R 309807 CDS YP_445205.1 83815322 3852112 1346023..1346451 1 NC_007677.1 identified by match to protein family HMM PF00334; nucleoside diphosphate kinase 1346451 ndk 3852112 ndk Salinibacter ruber DSM 13855 nucleoside diphosphate kinase YP_445205.1 1346023 D 309807 CDS YP_445206.1 83814672 3852257 1346517..1347767 1 NC_007677.1 identified by match to protein family HMM PF07075; hypothetical protein 1347767 3852257 SRU_1076 Salinibacter ruber DSM 13855 hypothetical protein YP_445206.1 1346517 D 309807 CDS YP_445207.1 83816203 3851816 complement(1347768..1348124) 1 NC_007677.1 hypothetical protein 1348124 3851816 SRU_1077 Salinibacter ruber DSM 13855 hypothetical protein YP_445207.1 1347768 R 309807 CDS YP_445208.1 83815607 3850788 1348178..1349611 1 NC_007677.1 identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1349611 dacB 3850788 dacB Salinibacter ruber DSM 13855 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_445208.1 1348178 D 309807 CDS YP_445209.1 83815802 3852185 1349658..1350125 1 NC_007677.1 hypothetical protein 1350125 3852185 SRU_1079 Salinibacter ruber DSM 13855 hypothetical protein YP_445209.1 1349658 D 309807 CDS YP_445210.1 83816282 3852044 complement(1350168..1351076) 1 NC_007677.1 identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 1351076 dapA 3852044 dapA Salinibacter ruber DSM 13855 dihydrodipicolinate synthase YP_445210.1 1350168 R 309807 CDS YP_445211.1 83814550 3850798 complement(1351133..1351843) 1 NC_007677.1 identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 1351843 dapB 3850798 dapB Salinibacter ruber DSM 13855 dihydrodipicolinate reductase YP_445211.1 1351133 R 309807 CDS YP_445212.1 83814965 3851271 1352336..1353727 1 NC_007677.1 identified by similarity to SP:P05327; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 1353727 phrB 3851271 phrB Salinibacter ruber DSM 13855 deoxyribodipyrimidine photolyase YP_445212.1 1352336 D 309807 CDS YP_445213.1 83815385 3850897 complement(1355593..1357002) 1 NC_007677.1 hypothetical protein 1357002 3850897 SRU_1084 Salinibacter ruber DSM 13855 hypothetical protein YP_445213.1 1355593 R 309807 CDS YP_445214.1 83816329 3851956 complement(1357116..1357778) 1 NC_007677.1 hypothetical protein 1357778 3851956 SRU_1085 Salinibacter ruber DSM 13855 hypothetical protein YP_445214.1 1357116 R 309807 CDS YP_445215.1 83815817 3851623 1357855..1359264 1 NC_007677.1 hypothetical protein 1359264 3851623 SRU_1086 Salinibacter ruber DSM 13855 hypothetical protein YP_445215.1 1357855 D 309807 CDS YP_445216.1 83815230 3851031 complement(1360489..1361364) 1 NC_007677.1 identified by match to protein family HMM PF07883; cupin domain-containing protein 1361364 3851031 SRU_1087 Salinibacter ruber DSM 13855 cupin domain-containing protein YP_445216.1 1360489 R 309807 CDS YP_445217.1 83814942 3851325 1361835..1363082 1 NC_007677.1 identified by match to protein family HMM PF00589; phage integrase family protein 1363082 3851325 SRU_1088 Salinibacter ruber DSM 13855 phage integrase family protein YP_445217.1 1361835 D 309807 CDS YP_445218.1 83814395 3851168 complement(1369446..1369820) 1 NC_007677.1 hypothetical protein 1369820 3851168 SRU_1089 Salinibacter ruber DSM 13855 hypothetical protein YP_445218.1 1369446 R 309807 CDS YP_445219.1 83816267 3852930 complement(1371436..1371702) 1 NC_007677.1 RhoA-specific guanine exchange factor 1371702 3852930 SRU_1090 Salinibacter ruber DSM 13855 RhoA-specific guanine exchange factor YP_445219.1 1371436 R 309807 CDS YP_445220.1 83815561 3852234 complement(1371754..1372512) 1 NC_007677.1 hypothetical protein 1372512 3852234 SRU_1091 Salinibacter ruber DSM 13855 hypothetical protein YP_445220.1 1371754 R 309807 CDS YP_445221.1 83815265 3851046 complement(1372623..1372850) 1 NC_007677.1 hypothetical protein 1372850 3851046 SRU_1092 Salinibacter ruber DSM 13855 hypothetical protein YP_445221.1 1372623 R 309807 CDS YP_445222.1 83814486 3851708 complement(1373830..1374165) 1 NC_007677.1 hypothetical protein 1374165 3851708 SRU_1093 Salinibacter ruber DSM 13855 hypothetical protein YP_445222.1 1373830 R 309807 CDS YP_445223.1 83816764 3852571 complement(1374242..1374952) 1 NC_007677.1 hypothetical protein 1374952 3852571 SRU_1094 Salinibacter ruber DSM 13855 hypothetical protein YP_445223.1 1374242 R 309807 CDS YP_445224.1 83816163 3851542 complement(1375077..1375487) 1 NC_007677.1 hypothetical protein 1375487 3851542 SRU_1095 Salinibacter ruber DSM 13855 hypothetical protein YP_445224.1 1375077 R 309807 CDS YP_445225.1 83816400 3851740 complement(1375550..1376125) 1 NC_007677.1 identified by match to protein family HMM PF07275; antirestriction protein 1376125 3851740 SRU_1096 Salinibacter ruber DSM 13855 antirestriction protein YP_445225.1 1375550 R 309807 CDS YP_445226.1 83814257 3852486 1380283..1380549 1 NC_007677.1 hypothetical protein 1380549 3852486 SRU_1097 Salinibacter ruber DSM 13855 hypothetical protein YP_445226.1 1380283 D 309807 CDS YP_445227.1 83815070 3852365 1380683..1382251 1 NC_007677.1 identified by match to protein family HMM PF02384; type i restriction enzyme hindviip m protein 1382251 3852365 SRU_1098 Salinibacter ruber DSM 13855 type i restriction enzyme hindviip m protein YP_445227.1 1380683 D 309807 CDS YP_445228.1 83815971 3852708 1382294..1383520 1 NC_007677.1 identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 1383520 3852708 SRU_1099 Salinibacter ruber DSM 13855 type I restriction-modification system subunit S YP_445228.1 1382294 D 309807 CDS YP_445229.1 83814915 3850967 1383558..1384331 1 NC_007677.1 identified by match to protein family HMM PF06271; RDD family protein 1384331 3850967 SRU_1100 Salinibacter ruber DSM 13855 RDD family protein YP_445229.1 1383558 D 309807 CDS YP_445230.1 83815663 3851000 1384371..1385399 1 NC_007677.1 hypothetical protein 1385399 3851000 SRU_1101 Salinibacter ruber DSM 13855 hypothetical protein YP_445230.1 1384371 D 309807 CDS YP_445231.1 83815927 3850425 1385496..1388645 1 NC_007677.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; hypothetical protein 1388645 3850425 SRU_1102 Salinibacter ruber DSM 13855 hypothetical protein YP_445231.1 1385496 D 309807 CDS YP_445232.1 83816599 3853129 1389684..1390334 1 NC_007677.1 hypothetical protein 1390334 3853129 SRU_1103 Salinibacter ruber DSM 13855 hypothetical protein YP_445232.1 1389684 D 309807 CDS YP_445233.1 83815122 3852653 1392650..1392748 1 NC_007677.1 hypothetical protein 1392748 3852653 SRU_1104 Salinibacter ruber DSM 13855 hypothetical protein YP_445233.1 1392650 D 309807 CDS YP_445234.1 83816033 3851685 1392772..1393353 1 NC_007677.1 transposase, degenerate 1393353 3851685 SRU_1105 Salinibacter ruber DSM 13855 transposase, degenerate YP_445234.1 1392772 D 309807 CDS YP_445235.1 83816606 3853136 1394575..1394697 1 NC_007677.1 hypothetical protein 1394697 3853136 SRU_1107 Salinibacter ruber DSM 13855 hypothetical protein YP_445235.1 1394575 D 309807 CDS YP_445236.1 83814314 3851517 complement(1394840..1395142) 1 NC_007677.1 hypothetical protein 1395142 3851517 SRU_1108 Salinibacter ruber DSM 13855 hypothetical protein YP_445236.1 1394840 R 309807 CDS YP_445237.1 83815014 3852425 complement(1397735..1398658) 1 NC_007677.1 identified by match to protein family HMM PF00075; ribonuclease H 1398658 3852425 SRU_1109 Salinibacter ruber DSM 13855 ribonuclease H YP_445237.1 1397735 R 309807 CDS YP_445238.1 83815637 3850700 complement(1399001..1401115) 1 NC_007677.1 hypothetical protein 1401115 3850700 SRU_1110 Salinibacter ruber DSM 13855 hypothetical protein YP_445238.1 1399001 R 309807 CDS YP_445239.1 83816268 3852931 1402396..1403241 1 NC_007677.1 identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein 1403241 3852931 SRU_1112 Salinibacter ruber DSM 13855 MazG family protein YP_445239.1 1402396 D 309807 CDS YP_445240.1 83814322 3851525 1403335..1403937 1 NC_007677.1 hypothetical protein 1403937 3851525 SRU_1113 Salinibacter ruber DSM 13855 hypothetical protein YP_445240.1 1403335 D 309807 CDS YP_445241.1 83814950 3851333 1404029..1404433 1 NC_007677.1 hypothetical protein 1404433 3851333 SRU_1114 Salinibacter ruber DSM 13855 hypothetical protein YP_445241.1 1404029 D 309807 CDS YP_445242.1 83815630 3850693 complement(1404491..1405018) 1 NC_007677.1 hypothetical protein 1405018 3850693 SRU_1115 Salinibacter ruber DSM 13855 hypothetical protein YP_445242.1 1404491 R 309807 CDS YP_445243.1 83816198 3851811 1405253..1406449 1 NC_007677.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein 1406449 3851811 SRU_1116 Salinibacter ruber DSM 13855 acyl-CoA dehydrogenase domain-containing protein YP_445243.1 1405253 D 309807 CDS YP_445244.1 83816787 3851215 1406761..1407279 1 NC_007677.1 identified by match to protein family HMM PF00210; starvation induced DNA binding protein 1407279 3851215 SRU_1117 Salinibacter ruber DSM 13855 starvation induced DNA binding protein YP_445244.1 1406761 D 309807 CDS YP_445245.1 83814718 3851511 1407572..1410160 1 NC_007677.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1410160 topA 3851511 topA Salinibacter ruber DSM 13855 DNA topoisomerase I YP_445245.1 1407572 D 309807 CDS YP_445246.1 83815175 3850370 complement(1410236..1411210) 1 NC_007677.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1411210 rsgA 3850370 rsgA Salinibacter ruber DSM 13855 ribosome-associated GTPase YP_445246.1 1410236 R 309807 CDS YP_445247.1 83814920 3850972 1411511..1411909 1 NC_007677.1 hypothetical protein 1411909 3850972 SRU_1121 Salinibacter ruber DSM 13855 hypothetical protein YP_445247.1 1411511 D 309807 CDS YP_445248.1 83815952 3850450 complement(1411607..1411924) 1 NC_007677.1 hypothetical protein 1411924 3850450 SRU_1120 Salinibacter ruber DSM 13855 hypothetical protein YP_445248.1 1411607 R 309807 CDS YP_445249.1 83815508 3852318 complement(1412101..1413906) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; FixL-related histidine kinase 1413906 3852318 SRU_1122 Salinibacter ruber DSM 13855 FixL-related histidine kinase YP_445249.1 1412101 R 309807 CDS YP_445250.1 83816573 3851917 complement(1414131..1415648) 1 NC_007677.1 identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137; cystathionine beta-synthase 1415648 3851917 SRU_1123 Salinibacter ruber DSM 13855 cystathionine beta-synthase YP_445250.1 1414131 R 309807 CDS YP_445251.1 83814343 3851390 complement(1415697..1416929) 1 NC_007677.1 identified by match to protein family HMM PF03739; hypothetical protein 1416929 3851390 SRU_1124 Salinibacter ruber DSM 13855 hypothetical protein YP_445251.1 1415697 R 309807 CDS YP_445252.1 83814561 3850809 1416928..1418106 1 NC_007677.1 identified by match to protein family HMM PF00549; match to protein family HMM PF02222; match to protein family HMM TIGR01016; succinyl-CoA synthetase beta chain 1418106 3850809 SRU_1125 Salinibacter ruber DSM 13855 succinyl-CoA synthetase beta chain YP_445252.1 1416928 D 309807 CDS YP_445253.1 83815116 3852647 complement(1418131..1419054) 1 NC_007677.1 hypothetical protein 1419054 3852647 SRU_1126 Salinibacter ruber DSM 13855 hypothetical protein YP_445253.1 1418131 R 309807 CDS YP_445254.1 83816837 3851148 1419624..1420019 1 NC_007677.1 IS5 family transposase 1420019 3851148 SRU_1127 Salinibacter ruber DSM 13855 IS5 family transposase YP_445254.1 1419624 D 309807 CDS YP_445255.1 83816019 3851671 1420801..1422093 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 1422093 3851671 SRU_1128 Salinibacter ruber DSM 13855 amidohydrolase YP_445255.1 1420801 D 309807 CDS YP_445256.1 83815979 3852716 1422086..1423375 1 NC_007677.1 identified by match to protein family HMM PF01979; amidohydrolase family protein 1423375 3852716 SRU_1129 Salinibacter ruber DSM 13855 amidohydrolase family protein YP_445256.1 1422086 D 309807 CDS YP_445257.1 83815158 3850392 complement(1423404..1424462) 1 NC_007677.1 identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase 1424462 3850392 SRU_1130 Salinibacter ruber DSM 13855 4'-phosphopantetheinyl transferase YP_445257.1 1423404 R 309807 CDS YP_445258.1 83815717 3850624 complement(1424689..1426104) 1 NC_007677.1 hypothetical protein 1426104 3850624 SRU_1132 Salinibacter ruber DSM 13855 hypothetical protein YP_445258.1 1424689 R 309807 CDS YP_445259.1 83814229 3850474 complement(1426204..1427409) 1 NC_007677.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238; lysine 2,3-aminomutase YodO family protein 1427409 3850474 SRU_1133 Salinibacter ruber DSM 13855 lysine 2,3-aminomutase YodO family protein YP_445259.1 1426204 R 309807 CDS YP_445260.1 83816232 3852895 1427632..1427850 1 NC_007677.1 identified by match to protein family HMM PF04255; hypothetical protein 1427850 3852895 SRU_1134 Salinibacter ruber DSM 13855 hypothetical protein YP_445260.1 1427632 D 309807 CDS YP_445261.1 83816045 3853155 complement(1428220..1429104) 1 NC_007677.1 identified by match to protein family HMM PF07478; D-alanine--D-alanine ligase 1429104 3853155 SRU_1135 Salinibacter ruber DSM 13855 D-alanine--D-alanine ligase YP_445261.1 1428220 R 309807 CDS YP_445262.1 83815218 3852299 1429488..1429802 1 NC_007677.1 hypothetical protein 1429802 3852299 SRU_1136 Salinibacter ruber DSM 13855 hypothetical protein YP_445262.1 1429488 D 309807 CDS YP_445263.1 83816106 3850586 1429929..1431542 1 NC_007677.1 identified by match to protein family HMM PF03553; Na(+)/H(+) antiporter family protein 1431542 3850586 SRU_1137 Salinibacter ruber DSM 13855 Na(+)/H(+) antiporter family protein YP_445263.1 1429929 D 309807 CDS YP_445264.1 83815920 3851610 complement(1431595..1434069) 1 NC_007677.1 identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01418; phosphoenolpyruvate synthase 1434069 ppsA 3851610 ppsA Salinibacter ruber DSM 13855 phosphoenolpyruvate synthase YP_445264.1 1431595 R 309807 CDS YP_445265.1 83815137 3852944 1434546..1435823 1 NC_007677.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1435823 ahcY 3852944 ahcY Salinibacter ruber DSM 13855 S-adenosyl-L-homocysteine hydrolase YP_445265.1 1434546 D 309807 CDS YP_445266.1 83816456 3852823 1436161..1436442 1 NC_007677.1 hypothetical protein 1436442 3852823 SRU_1140 Salinibacter ruber DSM 13855 hypothetical protein YP_445266.1 1436161 D 309807 CDS YP_445267.1 83816272 3852034 1436753..1437535 1 NC_007677.1 identified by match to protein family HMM PF07973; alanyl-tRNA synthetase 1437535 3852034 SRU_1141 Salinibacter ruber DSM 13855 alanyl-tRNA synthetase YP_445267.1 1436753 D 309807 CDS YP_445268.1 83814387 3851258 1437602..1438384 1 NC_007677.1 identified by match to protein family HMM PF00288; GHMP kinases ATP-binding protein 1438384 3851258 SRU_1142 Salinibacter ruber DSM 13855 GHMP kinases ATP-binding protein YP_445268.1 1437602 D 309807 CDS YP_445269.1 83815052 3851281 1438503..1440524 1 NC_007677.1 identified by match to protein family HMM PF01804; penicillin amidase superfamily protein 1440524 3851281 SRU_1143 Salinibacter ruber DSM 13855 penicillin amidase superfamily protein YP_445269.1 1438503 D 309807 CDS YP_445270.1 83815994 3852731 1440651..1441127 1 NC_007677.1 hypothetical protein 1441127 3852731 SRU_1144 Salinibacter ruber DSM 13855 hypothetical protein YP_445270.1 1440651 D 309807 CDS YP_445271.1 83816596 3853126 complement(1441170..1441514) 1 NC_007677.1 identified by match to protein family HMM PF00037; ferredoxin-1 1441514 3853126 SRU_1145 Salinibacter ruber DSM 13855 ferredoxin-1 YP_445271.1 1441170 R 309807 CDS YP_445272.1 83815259 3853027 complement(1441721..1442755) 1 NC_007677.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1442755 ruvB 3853027 ruvB Salinibacter ruber DSM 13855 Holliday junction DNA helicase RuvB YP_445272.1 1441721 R 309807 CDS YP_445273.1 83815897 3851587 1443048..1444562 1 NC_007677.1 identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor 1444562 rpoN 3851587 rpoN Salinibacter ruber DSM 13855 RNA polymerase sigma-54 factor YP_445273.1 1443048 D 309807 CDS YP_445274.1 83816338 3851965 complement(1444605..1445402) 1 NC_007677.1 hypothetical protein 1445402 3851965 SRU_1148 Salinibacter ruber DSM 13855 hypothetical protein YP_445274.1 1444605 R 309807 CDS YP_445275.1 83814656 3851430 1445566..1447080 1 NC_007677.1 identified by match to protein family HMM PF00266; aminotransferase 1447080 3851430 SRU_1149 Salinibacter ruber DSM 13855 aminotransferase YP_445275.1 1445566 D 309807 CDS YP_445276.1 83815100 3850510 complement(1447095..1449218) 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; elongation factor G 1449218 fus 3850510 fus Salinibacter ruber DSM 13855 elongation factor G YP_445276.1 1447095 R 309807 CDS YP_445277.1 83815545 3852218 1449505..1449996 1 NC_007677.1 identified by match to protein family HMM PF04214; hypothetical protein 1449996 3852218 SRU_1151 Salinibacter ruber DSM 13855 hypothetical protein YP_445277.1 1449505 D 309807 CDS YP_445278.1 83814931 3850983 1450000..1450635 1 NC_007677.1 identified by match to protein family HMM PF07920; hypothetical protein 1450635 3850983 SRU_1152 Salinibacter ruber DSM 13855 hypothetical protein YP_445278.1 1450000 D 309807 CDS YP_445279.1 83815841 3851647 1450788..1451609 1 NC_007677.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1451609 fabG 3851647 fabG Salinibacter ruber DSM 13855 3-ketoacyl-ACP reductase YP_445279.1 1450788 D 309807 CDS YP_445280.1 83814340 3851387 1451652..1452353 1 NC_007677.1 identified by match to protein family HMM PF00814; glycoprotease (M22) metalloprotease 1452353 3851387 SRU_1154 Salinibacter ruber DSM 13855 glycoprotease (M22) metalloprotease YP_445280.1 1451652 D 309807 CDS YP_445281.1 83814390 3851163 1452467..1453315 1 NC_007677.1 identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1453315 accD 3851163 accD Salinibacter ruber DSM 13855 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_445281.1 1452467 D 309807 CDS YP_445282.1 83815040 3852629 1453601..1456054 1 NC_007677.1 hypothetical protein 1456054 3852629 SRU_1156 Salinibacter ruber DSM 13855 hypothetical protein YP_445282.1 1453601 D 309807 CDS YP_445283.1 83815476 3853070 1456175..1457215 1 NC_007677.1 surface antigen 1457215 3853070 SRU_1157 Salinibacter ruber DSM 13855 surface antigen YP_445283.1 1456175 D 309807 CDS YP_445284.1 83816441 3852808 1457246..1459105 1 NC_007677.1 identified by match to protein family HMM PF01839; FG-GAP repeat-containing protein 1459105 3852808 SRU_1158 Salinibacter ruber DSM 13855 FG-GAP repeat-containing protein YP_445284.1 1457246 D 309807 CDS YP_445285.1 83814901 3852350 complement(1459132..1459599) 1 NC_007677.1 hypothetical protein 1459599 3852350 SRU_1159 Salinibacter ruber DSM 13855 hypothetical protein YP_445285.1 1459132 R 309807 CDS YP_445286.1 83815715 3850622 1459842..1461917 1 NC_007677.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1461917 uvrB 3850622 uvrB Salinibacter ruber DSM 13855 excinuclease ABC subunit B YP_445286.1 1459842 D 309807 CDS YP_445287.1 83816852 3852873 complement(1461993..1463219) 1 NC_007677.1 identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase MetC 1463219 3852873 SRU_1161 Salinibacter ruber DSM 13855 cystathionine beta-lyase MetC YP_445287.1 1461993 R 309807 CDS YP_445288.1 83814102 3850915 1463613..1463867 1 NC_007677.1 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 1463867 rpmE 3850915 rpmE Salinibacter ruber DSM 13855 50S ribosomal protein L31 YP_445288.1 1463613 D 309807 CDS YP_445289.1 83814570 3852959 1463913..1465382 1 NC_007677.1 identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase 1465382 pyn 3852959 pyn Salinibacter ruber DSM 13855 pyrimidine-nucleoside phosphorylase YP_445289.1 1463913 D 309807 CDS YP_445290.1 83815372 3850668 1465450..1466238 1 NC_007677.1 identified by match to protein family HMM PF04012; hypothetical protein 1466238 3850668 SRU_1164 Salinibacter ruber DSM 13855 hypothetical protein YP_445290.1 1465450 D 309807 CDS YP_445291.1 83815002 3853041 complement(1466309..1467499) 1 NC_007677.1 hypothetical protein 1467499 3853041 SRU_1165 Salinibacter ruber DSM 13855 hypothetical protein YP_445291.1 1466309 R 309807 CDS YP_445292.1 83814548 3850796 complement(1467810..1468412) 1 NC_007677.1 hypothetical protein 1468412 3850796 SRU_1166 Salinibacter ruber DSM 13855 hypothetical protein YP_445292.1 1467810 R 309807 CDS YP_445293.1 83815187 3851768 complement(1468461..1468973) 1 NC_007677.1 identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581; molybdenum cofactor biosynthesis protein C 1468973 moaC 3851768 moaC Salinibacter ruber DSM 13855 molybdenum cofactor biosynthesis protein C YP_445293.1 1468461 R 309807 CDS YP_445294.1 83816175 3851554 complement(1469092..1470696) 1 NC_007677.1 identified by match to protein family HMM PF07969; amidohydrolase 1470696 3851554 SRU_1168 Salinibacter ruber DSM 13855 amidohydrolase YP_445294.1 1469092 R 309807 CDS YP_445295.1 83814487 3851709 1471008..1475552 1 NC_007677.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 1475552 gltB 3851709 gltB Salinibacter ruber DSM 13855 glutamate synthase, large subunit YP_445295.1 1471008 D 309807 CDS YP_445296.1 83815233 3851034 1475627..1477207 1 NC_007677.1 identified by match to protein family HMM PF07992; match to protein family HMM TIGR01317; glutamate synthase 1477207 gltD 3851034 gltD Salinibacter ruber DSM 13855 glutamate synthase YP_445296.1 1475627 D 309807 CDS YP_445297.1 83815692 3850599 complement(1477217..1477669) 1 NC_007677.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1477669 dtd 3850599 dtd Salinibacter ruber DSM 13855 D-tyrosyl-tRNA(Tyr) deacylase YP_445297.1 1477217 R 309807 CDS YP_445298.1 83816432 3852799 complement(1477715..1478326) 1 NC_007677.1 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 1478326 rdgB 3852799 rdgB Salinibacter ruber DSM 13855 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_445298.1 1477715 R 309807 CDS YP_445299.1 83815605 3850786 complement(1478869..1482600) 1 NC_007677.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase 1482600 kgd 3850786 kgd Salinibacter ruber DSM 13855 alpha-ketoglutarate decarboxylase YP_445299.1 1478869 R 309807 CDS YP_445300.1 83814955 3851260 complement(1482716..1483735) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein 1483735 3851260 SRU_1174 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein YP_445300.1 1482716 R 309807 CDS YP_445301.1 83814704 3851497 complement(1484028..1484789) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1484789 3851497 SRU_1175 Salinibacter ruber DSM 13855 alkaline phosphatase synthesis transcriptional regulatory protein PhoP YP_445301.1 1484028 R 309807 CDS YP_445302.1 83816235 3852898 1485885..1486667 1 NC_007677.1 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 1486667 recO 3852898 recO Salinibacter ruber DSM 13855 DNA repair protein RecO YP_445302.1 1485885 D 309807 CDS YP_445303.1 83815365 3850661 1486777..1487427 1 NC_007677.1 identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498; LexA repressor 1487427 lexA 3850661 lexA Salinibacter ruber DSM 13855 LexA repressor YP_445303.1 1486777 D 309807 CDS YP_445304.1 83814720 3851474 1487458..1488111 1 NC_007677.1 methyltransferase 1488111 3851474 SRU_1178 Salinibacter ruber DSM 13855 methyltransferase YP_445304.1 1487458 D 309807 CDS YP_445305.1 83814331 3851378 complement(1488328..1489779) 1 NC_007677.1 identified by similarity to SP:P05327; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 1489779 phrB 3851378 phrB Salinibacter ruber DSM 13855 deoxyribodipyrimidine photolyase YP_445305.1 1488328 R 309807 CDS YP_445306.1 83815986 3852723 complement(1490437..1491108) 1 NC_007677.1 hypothetical protein 1491108 3852723 SRU_1181 Salinibacter ruber DSM 13855 hypothetical protein YP_445306.1 1490437 R 309807 CDS YP_445307.1 83815756 3852764 complement(1491148..1494279) 1 NC_007677.1 identified by match to protein family HMM PF00873; acriflavine resistance protein 1494279 3852764 SRU_1182 Salinibacter ruber DSM 13855 acriflavine resistance protein YP_445307.1 1491148 R 309807 CDS YP_445308.1 83815115 3852646 complement(1494328..1495650) 1 NC_007677.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane efflux protein 1495650 3852646 SRU_1183 Salinibacter ruber DSM 13855 membrane efflux protein YP_445308.1 1494328 R 309807 CDS YP_445309.1 83816395 3851735 1495976..1496587 1 NC_007677.1 identified by match to protein family HMM PF01205; hypothetical protein 1496587 3851735 SRU_1184 Salinibacter ruber DSM 13855 hypothetical protein YP_445309.1 1495976 D 309807 CDS YP_445310.1 83815783 3852166 complement(1496687..1497271) 1 NC_007677.1 identified by match to protein family HMM PF00075; RNase H 1497271 rnhA 3852166 rnhA Salinibacter ruber DSM 13855 RNase H YP_445310.1 1496687 R 309807 CDS YP_445311.1 83816128 3850530 1497310..1498329 1 NC_007677.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1498329 obgE 3850530 obgE Salinibacter ruber DSM 13855 GTPase ObgE YP_445311.1 1497310 D 309807 CDS YP_445312.1 83814168 3850491 1498326..1499492 1 NC_007677.1 identified by match to protein family HMM PF00633; match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA processing protein DprA 1499492 dprA 3850491 dprA Salinibacter ruber DSM 13855 DNA processing protein DprA YP_445312.1 1498326 D 309807 CDS YP_445313.1 83816761 3852568 1499450..1500826 1 NC_007677.1 identified by match to protein family HMM PF00266; aminotransferase 1500826 3852568 SRU_1188 Salinibacter ruber DSM 13855 aminotransferase YP_445313.1 1499450 D 309807 CDS YP_445314.1 83815887 3851576 1501033..1502082 1 NC_007677.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1502082 rluD 3851576 rluD Salinibacter ruber DSM 13855 ribosomal large subunit pseudouridine synthase D YP_445314.1 1501033 D 309807 CDS YP_445315.1 83815494 3853088 1502349..1502849 1 NC_007677.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 1502849 3853088 SRU_1190 Salinibacter ruber DSM 13855 HNH endonuclease domain-containing protein YP_445315.1 1502349 D 309807 CDS YP_445316.1 83814698 3853106 1503043..1503492 1 NC_007677.1 hypothetical protein 1503492 3853106 SRU_1191 Salinibacter ruber DSM 13855 hypothetical protein YP_445316.1 1503043 D 309807 CDS YP_445317.1 83814547 3850795 complement(1503584..1505278) 1 NC_007677.1 identified by match to protein family HMM PF03544; match to protein family HMM PF05569; match to protein family HMM TIGR01352; TonB family protein 1505278 3850795 SRU_1192 Salinibacter ruber DSM 13855 TonB family protein YP_445317.1 1503584 R 309807 CDS YP_445318.1 83815177 3850372 complement(1505268..1505681) 1 NC_007677.1 identified by match to protein family HMM PF03965; BlaI/MecI/CopY family transcriptional regulator 1505681 3850372 SRU_1193 Salinibacter ruber DSM 13855 BlaI/MecI/CopY family transcriptional regulator YP_445318.1 1505268 R 309807 CDS YP_445319.1 83814560 3850808 complement(1505782..1506495) 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase-like protein 1506495 3850808 SRU_1194 Salinibacter ruber DSM 13855 glycosyl transferase-like protein YP_445319.1 1505782 R 309807 CDS YP_445320.1 83816756 3852563 complement(1506650..1507543) 1 NC_007677.1 identified by match to protein family HMM PF02274; amidinotransferase 1507543 3852563 SRU_1195 Salinibacter ruber DSM 13855 amidinotransferase YP_445320.1 1506650 R 309807 CDS YP_445321.1 83816101 3850581 complement(1507636..1508298) 1 NC_007677.1 hypothetical protein 1508298 3850581 SRU_1196 Salinibacter ruber DSM 13855 hypothetical protein YP_445321.1 1507636 R 309807 CDS YP_445322.1 83814924 3850976 complement(1508490..1509434) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1509434 3850976 SRU_1197 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445322.1 1508490 R 309807 CDS YP_445323.1 83814145 3850938 complement(1509440..1510381) 1 NC_007677.1 identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 1510381 3850938 SRU_1198 Salinibacter ruber DSM 13855 small conductance mechanosensitive ion channel (MscS) family protein YP_445323.1 1509440 R 309807 CDS YP_445324.1 83816352 3851848 complement(1510427..1511623) 1 NC_007677.1 identified by match to protein family HMM PF00162; phosphoglycerate kinase 1511623 pgk 3851848 pgk Salinibacter ruber DSM 13855 phosphoglycerate kinase YP_445324.1 1510427 R 309807 CDS YP_445325.1 83815688 3850595 complement(1511715..1512719) 1 NC_007677.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 1512719 gap 3850595 gap Salinibacter ruber DSM 13855 glyceraldehyde-3-phosphate dehydrogenase, type I YP_445325.1 1511715 R 309807 CDS YP_445326.1 83814130 3851117 1513190..1513765 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1513765 3851117 SRU_1201 Salinibacter ruber DSM 13855 hypothetical protein YP_445326.1 1513190 D 309807 CDS YP_445327.1 83814743 3851361 1513914..1515293 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; C4-dicarboxylate transport transcriptional regulatory protein 1515293 dctD 3851361 dctD Salinibacter ruber DSM 13855 C4-dicarboxylate transport transcriptional regulatory protein YP_445327.1 1513914 D 309807 CDS YP_445328.1 83816779 3851207 1515329..1516144 1 NC_007677.1 identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein lolD 1516144 3851207 SRU_1203 Salinibacter ruber DSM 13855 lipoprotein-releasing system ATP-binding protein lolD YP_445328.1 1515329 D 309807 CDS YP_445329.1 83815621 3850684 1516391..1517032 1 NC_007677.1 identified by match to protein family HMM PF02190; ATP-dependent protease La 1517032 3850684 SRU_1204 Salinibacter ruber DSM 13855 ATP-dependent protease La YP_445329.1 1516391 D 309807 CDS YP_445330.1 83814831 3852397 1517054..1517965 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1517965 3852397 SRU_1205 Salinibacter ruber DSM 13855 metallo-beta-lactamase superfamily protein YP_445330.1 1517054 D 309807 CDS YP_445331.1 83814363 3851351 1518042..1518299 1 NC_007677.1 identified by match to protein family HMM PF00512; MCP domain-containing signal transducer 1518299 3851351 SRU_1206 Salinibacter ruber DSM 13855 MCP domain-containing signal transducer YP_445331.1 1518042 D 309807 CDS YP_445332.1 83816115 3850517 1518764..1519843 1 NC_007677.1 hypothetical protein 1519843 3850517 SRU_1207 Salinibacter ruber DSM 13855 hypothetical protein YP_445332.1 1518764 D 309807 CDS YP_445333.1 83815154 3850388 1520060..1520683 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1520683 3850388 SRU_1208 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_445333.1 1520060 D 309807 CDS YP_445334.1 83815604 3850785 1520747..1522645 1 NC_007677.1 identified by match to protein family HMM PF00501; acyl-CoA synthetase, long-chain-fatty acid:CoA ligase 1522645 fadD 3850785 fadD Salinibacter ruber DSM 13855 acyl-CoA synthetase, long-chain-fatty acid:CoA ligase YP_445334.1 1520747 D 309807 CDS YP_445335.1 83814999 3853038 1522773..1525181 1 NC_007677.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 1525181 3853038 SRU_1210 Salinibacter ruber DSM 13855 3-hydroxyacyl-CoA dehydrogenase YP_445335.1 1522773 D 309807 CDS YP_445336.1 83814414 3852998 1525298..1526503 1 NC_007677.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 1526503 atoB 3852998 atoB Salinibacter ruber DSM 13855 acetyl-CoA acetyltransferase YP_445336.1 1525298 D 309807 CDS YP_445337.1 83814850 3852787 1526564..1527310 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 1527310 3852787 SRU_1212 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein YP_445337.1 1526564 D 309807 CDS YP_445338.1 83815152 3850386 1527737..1530307 1 NC_007677.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1530307 fadE 3850386 fadE Salinibacter ruber DSM 13855 acyl-CoA dehydrogenase YP_445338.1 1527737 D 309807 CDS YP_445339.1 83816168 3851547 1530365..1531219 1 NC_007677.1 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 1531219 3851547 SRU_1214 Salinibacter ruber DSM 13855 short chain dehydrogenase/reductase family oxidoreductase YP_445339.1 1530365 D 309807 CDS YP_445340.1 83816769 3852576 1531268..1532074 1 NC_007677.1 hypothetical protein 1532074 3852576 SRU_1216 Salinibacter ruber DSM 13855 hypothetical protein YP_445340.1 1531268 D 309807 CDS YP_445341.1 83814816 3852421 complement(1532068..1533453) 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562; protoporphyrinogen oxidase 1533453 hemG 3852421 hemG Salinibacter ruber DSM 13855 protoporphyrinogen oxidase YP_445341.1 1532068 R 309807 CDS YP_445342.1 83815513 3852323 1533686..1533886 1 NC_007677.1 hypothetical protein 1533886 3852323 SRU_1217 Salinibacter ruber DSM 13855 hypothetical protein YP_445342.1 1533686 D 309807 CDS YP_445343.1 83816321 3851948 1534283..1536379 1 NC_007677.1 identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta 1536379 3851948 SRU_1218 Salinibacter ruber DSM 13855 propionyl-CoA carboxylase subunit beta YP_445343.1 1534283 D 309807 CDS YP_445344.1 83814301 3851093 complement(1536401..1536844) 1 NC_007677.1 identified by match to protein family HMM PF02566; OsmC-like protein 1536844 3851093 SRU_1219 Salinibacter ruber DSM 13855 OsmC-like protein YP_445344.1 1536401 R 309807 CDS YP_445345.1 83814215 3850460 1536925..1537602 1 NC_007677.1 identified by match to protein family HMM PF06803; hypothetical protein 1537602 3850460 SRU_1220 Salinibacter ruber DSM 13855 hypothetical protein YP_445345.1 1536925 D 309807 CDS YP_445346.1 83816485 3852854 1537686..1538378 1 NC_007677.1 identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin 1538378 3852854 SRU_1221 Salinibacter ruber DSM 13855 hemolysin YP_445346.1 1537686 D 309807 CDS YP_445347.1 83814725 3851479 complement(1538386..1539186) 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1539186 3851479 SRU_1222 Salinibacter ruber DSM 13855 metallo-beta-lactamase superfamily protein YP_445347.1 1538386 R 309807 CDS YP_445348.1 83815330 3852120 complement(1539244..1540311) 1 NC_007677.1 identified by match to protein family HMM PF00348; polyprenyl synthetase 1540311 3852120 SRU_1223 Salinibacter ruber DSM 13855 polyprenyl synthetase YP_445348.1 1539244 R 309807 CDS YP_445349.1 83815063 3851292 complement(1540436..1541437) 1 NC_007677.1 identified by match to protein family HMM PF01032; hemin ABC transporter permease 1541437 3851292 SRU_1224 Salinibacter ruber DSM 13855 hemin ABC transporter permease YP_445349.1 1540436 R 309807 CDS YP_445350.1 83815522 3852332 complement(1541458..1542510) 1 NC_007677.1 identified by match to protein family HMM PF01497; periplasmic binding protein 1542510 3852332 SRU_1225 Salinibacter ruber DSM 13855 periplasmic binding protein YP_445350.1 1541458 R 309807 CDS YP_445351.1 83814494 3851716 1542510..1544081 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199; response regulatory protein 1544081 rrp 3851716 rrp Salinibacter ruber DSM 13855 response regulatory protein YP_445351.1 1542510 D 309807 CDS YP_445352.1 83814268 3852497 1543999..1545102 1 NC_007677.1 identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 1545102 3852497 SRU_1227 Salinibacter ruber DSM 13855 deoxyribose-phosphate aldolase YP_445352.1 1543999 D 309807 CDS YP_445353.1 83815360 3850656 1545153..1546742 1 NC_007677.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase, mitochondrial 1546742 3850656 SRU_1228 Salinibacter ruber DSM 13855 aldehyde dehydrogenase, mitochondrial YP_445353.1 1545153 D 309807 CDS YP_445354.1 83814705 3851498 1546643..1547533 1 NC_007677.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 1547533 3851498 SRU_1229 Salinibacter ruber DSM 13855 aldehyde dehydrogenase (NAD) family protein YP_445354.1 1546643 D 309807 CDS YP_445355.1 83814323 3851526 1547566..1548156 1 NC_007677.1 hypothetical protein 1548156 3851526 SRU_1230 Salinibacter ruber DSM 13855 hypothetical protein YP_445355.1 1547566 D 309807 CDS YP_445356.1 83815411 3852986 complement(1548173..1549585) 1 NC_007677.1 identified by match to protein family HMM PF00282; match to protein family HMM PF01212; pyridoxal-dependent decarboxylase family protein 1549585 3852986 SRU_1231 Salinibacter ruber DSM 13855 pyridoxal-dependent decarboxylase family protein YP_445356.1 1548173 R 309807 CDS YP_445357.1 83816274 3852036 complement(1549632..1550858) 1 NC_007677.1 identified by match to protein family HMM PF01266; glycine oxidase 1550858 3852036 SRU_1232 Salinibacter ruber DSM 13855 glycine oxidase YP_445357.1 1549632 R 309807 CDS YP_445358.1 83814402 3851175 1550758..1552029 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO 1552029 thiO 3851175 thiO Salinibacter ruber DSM 13855 glycine oxidase ThiO YP_445358.1 1550758 D 309807 CDS YP_445359.1 83815881 3852539 1552026..1552268 1 NC_007677.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 1552268 thiS 3852539 thiS Salinibacter ruber DSM 13855 thiamine biosynthesis protein ThiS YP_445359.1 1552026 D 309807 CDS YP_445360.1 83816580 3853110 1552317..1553138 1 NC_007677.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1553138 thiG 3853110 thiG Salinibacter ruber DSM 13855 thiazole synthase YP_445360.1 1552317 D 309807 CDS YP_445361.1 83816726 3850843 1553494..1554126 1 NC_007677.1 identified by match to protein family HMM PF02581; thiamine-phosphate pyrophosphorylase 1554126 3850843 SRU_1236 Salinibacter ruber DSM 13855 thiamine-phosphate pyrophosphorylase YP_445361.1 1553494 D 309807 CDS YP_445362.1 83814468 3851787 1554175..1555047 1 NC_007677.1 identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1555047 thiD 3851787 thiD Salinibacter ruber DSM 13855 phosphomethylpyrimidine kinase YP_445362.1 1554175 D 309807 CDS YP_445363.1 83814761 3851691 1555501..1556049 1 NC_007677.1 DNA polymerase III subunit gamma 1556049 3851691 SRU_1239 Salinibacter ruber DSM 13855 DNA polymerase III subunit gamma YP_445363.1 1555501 D 309807 CDS YP_445364.1 83815566 3852239 1556234..1556584 1 NC_007677.1 hypothetical protein 1556584 3852239 SRU_1240 Salinibacter ruber DSM 13855 hypothetical protein YP_445364.1 1556234 D 309807 CDS YP_445365.1 83815151 3850385 1556762..1558552 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; histidine kinase PhoR1 1558552 3850385 SRU_1241 Salinibacter ruber DSM 13855 histidine kinase PhoR1 YP_445365.1 1556762 D 309807 CDS YP_445366.1 83816501 3852870 complement(1558614..1559141) 1 NC_007677.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1559141 3852870 SRU_1242 Salinibacter ruber DSM 13855 rhodanese-like domain-containing protein YP_445366.1 1558614 R 309807 CDS YP_445367.1 83814439 3850725 complement(1559182..1559475) 1 NC_007677.1 hypothetical protein 1559475 3850725 SRU_1243 Salinibacter ruber DSM 13855 hypothetical protein YP_445367.1 1559182 R 309807 CDS YP_445368.1 83815222 3852303 1559788..1561239 1 NC_007677.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein 1561239 3852303 SRU_1244 Salinibacter ruber DSM 13855 peptidase M16 inactive domain-containing protein YP_445368.1 1559788 D 309807 CDS YP_445369.1 83815271 3851052 1561424..1563511 1 NC_007677.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; processing protease 1563511 ymxG 3851052 ymxG Salinibacter ruber DSM 13855 processing protease YP_445369.1 1561424 D 309807 CDS YP_445370.1 83816439 3852806 1563682..1564605 1 NC_007677.1 identified by match to protein family HMM PF00682; 3-hydroxy-3-methylglutaryl-CoA lyase 1564605 3852806 SRU_1246 Salinibacter ruber DSM 13855 3-hydroxy-3-methylglutaryl-CoA lyase YP_445370.1 1563682 D 309807 CDS YP_445371.1 83814065 3852469 complement(1564643..1565479) 1 NC_007677.1 identified by match to protein family HMM PF00149; phosphoesterase 1565479 3852469 SRU_1247 Salinibacter ruber DSM 13855 phosphoesterase YP_445371.1 1564643 R 309807 CDS YP_445372.1 83814839 3852776 complement(1565613..1566626) 1 NC_007677.1 hypothetical protein 1566626 3852776 SRU_1248 Salinibacter ruber DSM 13855 hypothetical protein YP_445372.1 1565613 R 309807 CDS YP_445373.1 83815959 3850457 complement(1566699..1568288) 1 NC_007677.1 hypothetical protein 1568288 3850457 SRU_1249 Salinibacter ruber DSM 13855 hypothetical protein YP_445373.1 1566699 R 309807 CDS YP_445374.1 83816752 3852559 complement(1568428..1569216) 1 NC_007677.1 ABC transporter permease 1569216 3852559 SRU_1250 Salinibacter ruber DSM 13855 ABC transporter permease YP_445374.1 1568428 R 309807 CDS YP_445375.1 83814631 3851444 complement(1569266..1570471) 1 NC_007677.1 identified by match to protein family HMM PF00005; multidrug ABC transporter ATPase 1570471 3851444 SRU_1251 Salinibacter ruber DSM 13855 multidrug ABC transporter ATPase YP_445375.1 1569266 R 309807 CDS YP_445376.1 83814985 3851194 1570464..1571594 1 NC_007677.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1571594 proB 3851194 proB Salinibacter ruber DSM 13855 gamma-glutamyl kinase YP_445376.1 1570464 D 309807 CDS YP_445377.1 83814317 3851520 1571703..1573013 1 NC_007677.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR00407; gamma-glutamyl phosphate reductase 1573013 proA 3851520 proA Salinibacter ruber DSM 13855 gamma-glutamyl phosphate reductase YP_445377.1 1571703 D 309807 CDS YP_445378.1 83815071 3852366 complement(1573046..1573816) 1 NC_007677.1 hypothetical protein 1573816 3852366 SRU_1254 Salinibacter ruber DSM 13855 hypothetical protein YP_445378.1 1573046 R 309807 CDS YP_445379.1 83815819 3851625 1573781..1575784 1 NC_007677.1 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; trk active potasium channel 1575784 3851625 SRU_1255 Salinibacter ruber DSM 13855 trk active potasium channel YP_445379.1 1573781 D 309807 CDS YP_445380.1 83816660 3852661 complement(1575808..1576884) 1 NC_007677.1 hypothetical protein 1576884 3852661 SRU_1256 Salinibacter ruber DSM 13855 hypothetical protein YP_445380.1 1575808 R 309807 CDS YP_445381.1 83814594 3851074 complement(1577021..1579963) 1 NC_007677.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1579963 gcvP 3851074 gcvP Salinibacter ruber DSM 13855 glycine dehydrogenase YP_445381.1 1577021 R 309807 CDS YP_445382.1 83816317 3851944 1580417..1581973 1 NC_007677.1 identified by match to protein family HMM PF00282; match to protein family HMM PF01212; L-2,4-diaminobutyrate decarboxylase 1581973 3851944 SRU_1258 Salinibacter ruber DSM 13855 L-2,4-diaminobutyrate decarboxylase YP_445382.1 1580417 D 309807 CDS YP_445383.1 83814166 3850489 1582138..1583334 1 NC_007677.1 identified by match to protein family HMM PF07690; D-lactate dehydrogenase 1583334 3850489 SRU_1259 Salinibacter ruber DSM 13855 D-lactate dehydrogenase YP_445383.1 1582138 D 309807 CDS YP_445384.1 83816227 3851840 1583437..1584126 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase 1584126 dehII 3851840 dehII Salinibacter ruber DSM 13855 haloacid dehalogenase YP_445384.1 1583437 D 309807 CDS YP_445385.1 83816380 3851876 complement(1584256..1589325) 1 NC_007677.1 identified by match to protein family HMM PF04357; hypothetical protein 1589325 3851876 SRU_1261 Salinibacter ruber DSM 13855 hypothetical protein YP_445385.1 1584256 R 309807 CDS YP_445386.1 83815788 3852171 complement(1589489..1591612) 1 NC_007677.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein 1591612 3852171 SRU_1262 Salinibacter ruber DSM 13855 OMP85 family outer membrane protein YP_445386.1 1589489 R 309807 CDS YP_445387.1 83815069 3852364 complement(1591832..1592941) 1 NC_007677.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein 1592941 yihY 3852364 yihY Salinibacter ruber DSM 13855 YihY family protein YP_445387.1 1591832 R 309807 CDS YP_445388.1 83814253 3852482 complement(1593056..1595092) 1 NC_007677.1 hypothetical protein 1595092 3852482 SRU_1264 Salinibacter ruber DSM 13855 hypothetical protein YP_445388.1 1593056 R 309807 CDS YP_445389.1 83815905 3851595 complement(1595218..1595877) 1 NC_007677.1 identified by match to protein family HMM PF01712; deoxynucleoside kinase subfamily protein 1595877 3851595 SRU_1265 Salinibacter ruber DSM 13855 deoxynucleoside kinase subfamily protein YP_445389.1 1595218 R 309807 CDS YP_445390.1 83814806 3852411 complement(1596072..1596584) 1 NC_007677.1 hypothetical protein 1596584 3852411 SRU_1266 Salinibacter ruber DSM 13855 hypothetical protein YP_445390.1 1596072 R 309807 CDS YP_445391.1 83814188 3850865 complement(1596792..1597757) 1 NC_007677.1 identified by match to protein family HMM PF00248; aldehyde reductase 1597757 3850865 SRU_1267 Salinibacter ruber DSM 13855 aldehyde reductase YP_445391.1 1596792 R 309807 CDS YP_445392.1 83816050 3853160 complement(1597908..1599236) 1 NC_007677.1 identified by match to protein family HMM PF00266; class V aminotransferase 1599236 3853160 SRU_1268 Salinibacter ruber DSM 13855 class V aminotransferase YP_445392.1 1597908 R 309807 CDS YP_445393.1 83815148 3850382 1599300..1601609 1 NC_007677.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1601609 metE 3850382 metE Salinibacter ruber DSM 13855 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_445393.1 1599300 D 309807 CDS YP_445394.1 83816644 3852098 complement(1601816..1602811) 1 NC_007677.1 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 1602811 ilvA 3852098 ilvA Salinibacter ruber DSM 13855 serine/threonine dehydratase YP_445394.1 1601816 R 309807 CDS YP_445395.1 83814633 3851446 1603943..1605463 1 NC_007677.1 identified by match to protein family HMM PF04932; pilin glycosylation enzyme 1605463 3851446 SRU_1271 Salinibacter ruber DSM 13855 pilin glycosylation enzyme YP_445395.1 1603943 D 309807 CDS YP_445396.1 83815078 3852374 1605875..1607164 1 NC_007677.1 identified by match to protein family HMM PF00482; type II secretion system protein F 1607164 3852374 SRU_1272 Salinibacter ruber DSM 13855 type II secretion system protein F YP_445396.1 1605875 D 309807 CDS YP_445397.1 83815932 3850430 1607346..1609478 1 NC_007677.1 identified by match to protein family HMM PF00437; type IV pilin 1609478 3850430 SRU_1273 Salinibacter ruber DSM 13855 type IV pilin YP_445397.1 1607346 D 309807 CDS YP_445398.1 83815667 3851004 1609587..1610099 1 NC_007677.1 hypothetical protein 1610099 3851004 SRU_1274 Salinibacter ruber DSM 13855 hypothetical protein YP_445398.1 1609587 D 309807 CDS YP_445399.1 83816491 3852860 1610326..1610976 1 NC_007677.1 hypothetical protein 1610976 3852860 SRU_1275 Salinibacter ruber DSM 13855 hypothetical protein YP_445399.1 1610326 D 309807 CDS YP_445400.1 83814083 3850406 1611344..1612135 1 NC_007677.1 hypothetical protein 1612135 3850406 SRU_1276 Salinibacter ruber DSM 13855 hypothetical protein YP_445400.1 1611344 D 309807 CDS YP_445401.1 83814855 3852792 1612496..1613926 1 NC_007677.1 identified by match to protein family HMM PF00437; twitching motility protein PilT 1613926 pilT 3852792 pilT Salinibacter ruber DSM 13855 twitching motility protein PilT YP_445401.1 1612496 D 309807 CDS YP_445402.1 83815789 3852172 1614149..1616200 1 NC_007677.1 identified by match to protein family HMM PF05137; fimbrial assembly protein (PilN) 1616200 3852172 SRU_1278 Salinibacter ruber DSM 13855 fimbrial assembly protein (PilN) YP_445402.1 1614149 D 309807 CDS YP_445403.1 83816628 3852082 complement(1616234..1617484) 1 NC_007677.1 hypothetical protein 1617484 3852082 SRU_1279 Salinibacter ruber DSM 13855 hypothetical protein YP_445403.1 1616234 R 309807 CDS YP_445404.1 83816469 3852836 1617501..1618781 1 NC_007677.1 identified by match to protein family HMM PF00263; general (Type II) secretion pathway (GSP) D protein 1618781 3852836 SRU_1280 Salinibacter ruber DSM 13855 general (Type II) secretion pathway (GSP) D protein YP_445404.1 1617501 D 309807 CDS YP_445405.1 83814843 3852780 1618901..1619701 1 NC_007677.1 identified by match to protein family HMM PF01261; AP endonuclease 1619701 3852780 SRU_1281 Salinibacter ruber DSM 13855 AP endonuclease YP_445405.1 1618901 D 309807 CDS YP_445406.1 83816053 3853163 1619807..1620094 1 NC_007677.1 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 1620094 gatC 3853163 gatC Salinibacter ruber DSM 13855 glutamyl-tRNA(Gln) amidotransferase subunit C YP_445406.1 1619807 D 309807 CDS YP_445407.1 83816793 3851221 1620264..1620677 1 NC_007677.1 identified by match to protein family HMM PF01047; transcriptional regulator 1620677 3851221 SRU_1283 Salinibacter ruber DSM 13855 transcriptional regulator YP_445407.1 1620264 D 309807 CDS YP_445408.1 83815368 3850664 1620792..1621151 1 NC_007677.1 hypothetical protein 1621151 3850664 SRU_1284 Salinibacter ruber DSM 13855 hypothetical protein YP_445408.1 1620792 D 309807 CDS YP_445409.1 83814709 3851502 complement(1621787..1622899) 1 NC_007677.1 identified by match to protein family HMM TIGR00209; galactose-1-phosphate uridylyltransferase 1622899 galT 3851502 galT Salinibacter ruber DSM 13855 galactose-1-phosphate uridylyltransferase YP_445409.1 1621787 R 309807 CDS YP_445410.1 83816447 3852814 1623361..1625439 1 NC_007677.1 identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium/alanine symporter 1625439 3852814 SRU_1286 Salinibacter ruber DSM 13855 sodium/alanine symporter YP_445410.1 1623361 D 309807 CDS YP_445411.1 83816044 3853154 1625518..1626150 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 1626150 upp 3853154 upp Salinibacter ruber DSM 13855 uracil phosphoribosyltransferase YP_445411.1 1625518 D 309807 CDS YP_445412.1 83814531 3852606 complement(1626198..1626560) 1 NC_007677.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 1626560 3852606 SRU_1288 Salinibacter ruber DSM 13855 hypothetical protein YP_445412.1 1626198 R 309807 CDS YP_445413.1 83814769 3851699 1626687..1628639 1 NC_007677.1 identified by match to protein family HMM PF03553; integral membrane protein- Na+H+ antiporter 1628639 3851699 SRU_1289 Salinibacter ruber DSM 13855 integral membrane protein- Na+H+ antiporter YP_445413.1 1626687 D 309807 CDS YP_445414.1 83815811 3851617 1627958..1629061 1 NC_007677.1 identified by match to protein family HMM PF01050; match to protein family HMM PF07883; mannose-1-phosphate guanylyltransferase 1629061 3851617 SRU_1290 Salinibacter ruber DSM 13855 mannose-1-phosphate guanylyltransferase YP_445414.1 1627958 D 309807 CDS YP_445415.1 83816785 3851213 1629197..1629784 1 NC_007677.1 identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 1629784 def 3851213 def Salinibacter ruber DSM 13855 peptide deformylase YP_445415.1 1629197 D 309807 CDS YP_445416.1 83814777 3851707 1629846..1630511 1 NC_007677.1 hypothetical protein 1630511 3851707 SRU_1292 Salinibacter ruber DSM 13855 hypothetical protein YP_445416.1 1629846 D 309807 CDS YP_445417.1 83815157 3850391 1630474..1631355 1 NC_007677.1 identified by match to protein family HMM PF00005; hemin ABC transporter ATP-binding protein 1631355 3850391 SRU_1293 Salinibacter ruber DSM 13855 hemin ABC transporter ATP-binding protein YP_445417.1 1630474 D 309807 CDS YP_445418.1 83816164 3851543 1631454..1632050 1 NC_007677.1 identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 1632050 3851543 SRU_1294 Salinibacter ruber DSM 13855 ATP:cob(I)alamin adenosyltransferase YP_445418.1 1631454 D 309807 CDS YP_445419.1 83816330 3851957 1632203..1633396 1 NC_007677.1 identified by match to protein family HMM PF01551; M24/M37 family peptidase 1633396 3851957 SRU_1295 Salinibacter ruber DSM 13855 M24/M37 family peptidase YP_445419.1 1632203 D 309807 CDS YP_445420.1 83815393 3850905 1633353..1634390 1 NC_007677.1 identified by match to protein family HMM PF01112; asparaginase 1634390 3850905 SRU_1296 Salinibacter ruber DSM 13855 asparaginase YP_445420.1 1633353 D 309807 CDS YP_445421.1 83815093 3850503 complement(1634396..1636594) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein 1636594 3850503 SRU_1297 Salinibacter ruber DSM 13855 outer membrane protein YP_445421.1 1634396 R 309807 CDS YP_445422.1 83814244 3852592 complement(1636584..1637828) 1 NC_007677.1 identified by match to protein family HMM TIGR02669; sporulation protein SpoIID 1637828 spoIID 3852592 spoIID Salinibacter ruber DSM 13855 sporulation protein SpoIID YP_445422.1 1636584 R 309807 CDS YP_445423.1 83814681 3853089 1638051..1638839 1 NC_007677.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 1638839 3853089 SRU_1299 Salinibacter ruber DSM 13855 TatD family hydrolase YP_445423.1 1638051 D 309807 CDS YP_445424.1 83815129 3852936 complement(1639281..1641284) 1 NC_007677.1 identified by similarity to SP:P04475; match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 1641284 dnaK 3852936 dnaK Salinibacter ruber DSM 13855 chaperone protein DnaK YP_445424.1 1639281 R 309807 CDS YP_445425.1 83815487 3853081 1641646..1642251 1 NC_007677.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1642251 pgsA 3853081 pgsA Salinibacter ruber DSM 13855 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_445425.1 1641646 D 309807 CDS YP_445426.1 83816767 3852574 1642295..1642972 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase 1642972 pyrE 3852574 pyrE Salinibacter ruber DSM 13855 orotate phosphoribosyltransferase YP_445426.1 1642295 D 309807 CDS YP_445427.1 83814261 3852490 1643066..1644304 1 NC_007677.1 identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence/damage-inducible protein CinA 1644304 cinA 3852490 cinA Salinibacter ruber DSM 13855 competence/damage-inducible protein CinA YP_445427.1 1643066 D 309807 CDS YP_445428.1 83814800 3852405 1644439..1645422 1 NC_007677.1 identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 1645422 3852405 SRU_1304 Salinibacter ruber DSM 13855 zinc-binding dehydrogenase family oxidoreductase YP_445428.1 1644439 D 309807 CDS YP_445429.1 83815510 3852320 complement(1645499..1645966) 1 NC_007677.1 identified by match to protein family HMM PF02566; osmotically inducible protein C 1645966 osmC 3852320 osmC Salinibacter ruber DSM 13855 osmotically inducible protein C YP_445429.1 1645499 R 309807 CDS YP_445430.1 83816500 3852869 complement(1646054..1646980) 1 NC_007677.1 identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 1646980 3852869 SRU_1306 Salinibacter ruber DSM 13855 small conductance mechanosensitive ion channel (MscS) family protein YP_445430.1 1646054 R 309807 CDS YP_445431.1 83814306 3851098 complement(1646977..1648065) 1 NC_007677.1 identified by match to protein family HMM PF04307; integral membrane protein 1648065 3851098 SRU_1307 Salinibacter ruber DSM 13855 integral membrane protein YP_445431.1 1646977 R 309807 CDS YP_445432.1 83815683 3851020 1648083..1648664 1 NC_007677.1 hypothetical protein 1648664 3851020 SRU_1308 Salinibacter ruber DSM 13855 hypothetical protein YP_445432.1 1648083 D 309807 CDS YP_445433.1 83816460 3852827 1648562..1649818 1 NC_007677.1 hypothetical protein 1649818 3852827 SRU_1309 Salinibacter ruber DSM 13855 hypothetical protein YP_445433.1 1648562 D 309807 CDS YP_445434.1 83814211 3850652 complement(1649828..1650400) 1 NC_007677.1 thioredoxin 1650400 yneN 3850652 yneN Salinibacter ruber DSM 13855 thioredoxin YP_445434.1 1649828 R 309807 CDS YP_445435.1 83814661 3852246 complement(1650409..1650768) 1 NC_007677.1 general stress protein 1650768 3852246 SRU_1311 Salinibacter ruber DSM 13855 general stress protein YP_445435.1 1650409 R 309807 CDS YP_445436.1 83814939 3851322 1650943..1652766 1 NC_007677.1 identified by match to protein family HMM PF01432; oligoendopeptidase F 1652766 pepF 3851322 pepF Salinibacter ruber DSM 13855 oligoendopeptidase F YP_445436.1 1650943 D 309807 CDS YP_445437.1 83815934 3850432 1652800..1653438 1 NC_007677.1 SAM-dependent methyltransferase 1653438 3850432 SRU_1313 Salinibacter ruber DSM 13855 SAM-dependent methyltransferase YP_445437.1 1652800 D 309807 CDS YP_445438.1 83815297 3850963 1653520..1654569 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 1654569 3850963 SRU_1314 Salinibacter ruber DSM 13855 universal stress protein YP_445438.1 1653520 D 309807 CDS YP_445439.1 83815557 3852230 1654556..1655521 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 1655521 3852230 SRU_1315 Salinibacter ruber DSM 13855 universal stress protein YP_445439.1 1654556 D 309807 CDS YP_445440.1 83816266 3852929 1655563..1656255 1 NC_007677.1 identified by match to protein family HMM PF01902; hypothetical protein 1656255 3852929 SRU_1316 Salinibacter ruber DSM 13855 hypothetical protein YP_445440.1 1655563 D 309807 CDS YP_445441.1 83816370 3851866 complement(1656396..1659023) 1 NC_007677.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; ATP-dependent Clp protease, ATPase subunit 1659023 clpC 3851866 clpC Salinibacter ruber DSM 13855 ATP-dependent Clp protease, ATPase subunit YP_445441.1 1656396 R 309807 CDS YP_445442.1 83814485 3851804 complement(1659330..1659740) 1 NC_007677.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein 1659740 3851804 SRU_1318 Salinibacter ruber DSM 13855 iron-sulfur cluster assembly accessory protein YP_445442.1 1659330 R 309807 CDS YP_445443.1 83816074 3853184 1660099..1660614 1 NC_007677.1 hypothetical protein 1660614 3853184 SRU_1320 Salinibacter ruber DSM 13855 hypothetical protein YP_445443.1 1660099 D 309807 CDS YP_445444.1 83815441 3850738 complement(1660605..1663070) 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF00930; dipeptidyl-peptidase 1663070 3850738 SRU_1319 Salinibacter ruber DSM 13855 dipeptidyl-peptidase YP_445444.1 1660605 R 309807 CDS YP_445445.1 83815608 3850789 complement(1663459..1664811) 1 NC_007677.1 hypothetical protein 1664811 3850789 SRU_1321 Salinibacter ruber DSM 13855 hypothetical protein YP_445445.1 1663459 R 309807 CDS YP_445446.1 83816251 3852914 1665591..1666361 1 NC_007677.1 hypothetical protein 1666361 3852914 SRU_1322 Salinibacter ruber DSM 13855 hypothetical protein YP_445446.1 1665591 D 309807 CDS YP_445447.1 83814096 3850909 complement(1666436..1667149) 1 NC_007677.1 identified by match to protein family HMM PF00383; cytidine deaminase 1667149 3850909 SRU_1323 Salinibacter ruber DSM 13855 cytidine deaminase YP_445447.1 1666436 R 309807 CDS YP_445448.1 83816520 3851994 1667134..1668327 1 NC_007677.1 identified by match to protein family HMM PF00155; aspartate aminotransferase 1668327 3851994 SRU_1324 Salinibacter ruber DSM 13855 aspartate aminotransferase YP_445448.1 1667134 D 309807 CDS YP_445449.1 83814068 3852472 complement(1668363..1669244) 1 NC_007677.1 identified by match to protein family HMM PF00483; nucleotidyl transferase 1669244 3852472 SRU_1325 Salinibacter ruber DSM 13855 nucleotidyl transferase YP_445449.1 1668363 R 309807 CDS YP_445450.1 83815205 3852286 complement(1669241..1670242) 1 NC_007677.1 identified by match to protein family HMM PF00459; match to protein family HMM TIGR01330; 3'(2'),5'-bisphosphate nucleotidase 1670242 3852286 SRU_1326 Salinibacter ruber DSM 13855 3'(2'),5'-bisphosphate nucleotidase YP_445450.1 1669241 R 309807 CDS YP_445451.1 83814909 3852358 complement(1670282..1670614) 1 NC_007677.1 hypothetical protein 1670614 3852358 SRU_1327 Salinibacter ruber DSM 13855 hypothetical protein YP_445451.1 1670282 R 309807 CDS YP_445452.1 83815719 3850626 complement(1670801..1671970) 1 NC_007677.1 identified by similarity to GB:AAR35562.1; hypothetical protein 1671970 3850626 SRU_1328 Salinibacter ruber DSM 13855 hypothetical protein YP_445452.1 1670801 R 309807 CDS YP_445453.1 83816506 3851980 complement(1672070..1673287) 1 NC_007677.1 identified by match to protein family HMM PF00999; potassium-efflux system protein 1673287 3851980 SRU_1329 Salinibacter ruber DSM 13855 potassium-efflux system protein YP_445453.1 1672070 R 309807 CDS YP_445454.1 83814736 3851490 complement(1673398..1675941) 1 NC_007677.1 identified by match to protein family HMM PF02687; permease 1675941 3851490 SRU_1330 Salinibacter ruber DSM 13855 permease YP_445454.1 1673398 R 309807 CDS YP_445455.1 83814109 3850922 complement(1676036..1676884) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1676884 3850922 SRU_1331 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445455.1 1676036 R 309807 CDS YP_445456.1 83815984 3852721 complement(1677060..1678499) 1 NC_007677.1 hypothetical protein 1678499 3852721 SRU_1332 Salinibacter ruber DSM 13855 hypothetical protein YP_445456.1 1677060 R 309807 CDS YP_445457.1 83816614 3853144 complement(1678565..1680646) 1 NC_007677.1 hypothetical protein 1680646 3853144 SRU_1333 Salinibacter ruber DSM 13855 hypothetical protein YP_445457.1 1678565 R 309807 CDS YP_445458.1 83815357 3853204 complement(1681513..1682481) 1 NC_007677.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase 1682481 pyrB 3853204 pyrB Salinibacter ruber DSM 13855 aspartate carbamoyltransferase YP_445458.1 1681513 R 309807 CDS YP_445459.1 83814491 3851713 complement(1682537..1683151) 1 NC_007677.1 identified by match to protein family HMM PF00156; phosphoribosyl transferase domain-containing protein 1683151 3851713 SRU_1335 Salinibacter ruber DSM 13855 phosphoribosyl transferase domain-containing protein YP_445459.1 1682537 R 309807 CDS YP_445460.1 83815528 3852338 1683283..1684215 1 NC_007677.1 identified by match to protein family HMM PF01882; hypothetical protein 1684215 3852338 SRU_1336 Salinibacter ruber DSM 13855 hypothetical protein YP_445460.1 1683283 D 309807 CDS YP_445461.1 83816342 3851969 complement(1684222..1684890) 1 NC_007677.1 hypothetical protein 1684890 3851969 SRU_1337 Salinibacter ruber DSM 13855 hypothetical protein YP_445461.1 1684222 R 309807 CDS YP_445462.1 83815005 3853044 complement(1684958..1686286) 1 NC_007677.1 identified by match to protein family HMM PF01594; transporter 1686286 3853044 SRU_1338 Salinibacter ruber DSM 13855 transporter YP_445462.1 1684958 R 309807 CDS YP_445463.1 83814380 3851251 1686368..1687783 1 NC_007677.1 identified by match to protein family HMM PF01937; hypothetical protein 1687783 3851251 SRU_1339 Salinibacter ruber DSM 13855 hypothetical protein YP_445463.1 1686368 D 309807 CDS YP_445464.1 83814609 3851461 1687865..1688188 1 NC_007677.1 identified by match to protein family HMM PF01985; CRS1/YhbY domain-containing superfamily 1688188 3851461 SRU_1340 Salinibacter ruber DSM 13855 CRS1/YhbY domain-containing superfamily YP_445464.1 1687865 D 309807 CDS YP_445465.1 83816791 3851219 complement(1688197..1689021) 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase-related protein 1689021 3851219 SRU_1341 Salinibacter ruber DSM 13855 metallo-beta-lactamase-related protein YP_445465.1 1688197 R 309807 CDS YP_445466.1 83816172 3851551 complement(1689207..1690034) 1 NC_007677.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 1690034 3851551 SRU_1342 Salinibacter ruber DSM 13855 inositol monophosphatase family protein YP_445466.1 1689207 R 309807 CDS YP_445467.1 83814847 3852784 complement(1690092..1690838) 1 NC_007677.1 identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 1690838 rnc 3852784 rnc Salinibacter ruber DSM 13855 ribonuclease III YP_445467.1 1690092 R 309807 CDS YP_445468.1 83816445 3852812 1690894..1692381 1 NC_007677.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase-like protein yneI 1692381 3852812 SRU_1344 Salinibacter ruber DSM 13855 aldehyde dehydrogenase-like protein yneI YP_445468.1 1690894 D 309807 CDS YP_445469.1 83815174 3850369 1692672..1693568 1 NC_007677.1 hypothetical protein 1693568 3850369 SRU_1345 Salinibacter ruber DSM 13855 hypothetical protein YP_445469.1 1692672 D 309807 CDS YP_445470.1 83816578 3853108 1693663..1694595 1 NC_007677.1 integral membrane protein 1694595 3853108 SRU_1346 Salinibacter ruber DSM 13855 integral membrane protein YP_445470.1 1693663 D 309807 CDS YP_445471.1 83814086 3850409 1694704..1695348 1 NC_007677.1 hypothetical protein 1695348 3850409 SRU_1347 Salinibacter ruber DSM 13855 hypothetical protein YP_445471.1 1694704 D 309807 CDS YP_445472.1 83814868 3851408 1695677..1696198 1 NC_007677.1 hypothetical protein 1696198 3851408 SRU_1348 Salinibacter ruber DSM 13855 hypothetical protein YP_445472.1 1695677 D 309807 CDS YP_445473.1 83816327 3851954 1696259..1696936 1 NC_007677.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase 1696936 gpm 3851954 gpm Salinibacter ruber DSM 13855 phosphoglycerate mutase YP_445473.1 1696259 D 309807 CDS YP_445474.1 83814242 3852590 1696917..1698455 1 NC_007677.1 identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543; isochorismate synthase 1698455 3852590 SRU_1350 Salinibacter ruber DSM 13855 isochorismate synthase YP_445474.1 1696917 D 309807 CDS YP_445475.1 83815108 3852639 1698481..1700256 1 NC_007677.1 identified by match to protein family HMM PF02776; match to protein family HMM TIGR00173; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1700256 menD 3852639 menD Salinibacter ruber DSM 13855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_445475.1 1698481 D 309807 CDS YP_445476.1 83815186 3851767 complement(1700329..1701345) 1 NC_007677.1 identified by match to protein family HMM PF00753; match to protein family HMM TIGR01409; cyclase 1701345 3851767 SRU_1352 Salinibacter ruber DSM 13855 cyclase YP_445476.1 1700329 R 309807 CDS YP_445477.1 83815103 3850513 1701392..1702360 1 NC_007677.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1702360 menA 3850513 menA Salinibacter ruber DSM 13855 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_445477.1 1701392 D 309807 CDS YP_445478.1 83814286 3850355 1702374..1703474 1 NC_007677.1 identified by match to protein family HMM TIGR01927; o-succinylbenzoic acid (OSB) synthetase 1703474 menC 3850355 menC Salinibacter ruber DSM 13855 o-succinylbenzoic acid (OSB) synthetase YP_445478.1 1702374 D 309807 CDS YP_445479.1 83815832 3851638 1703485..1704912 1 NC_007677.1 identified by match to protein family HMM PF00501; match to protein family HMM TIGR01923; o-succinylbenzoate--CoA ligase 1704912 menE 3851638 menE Salinibacter ruber DSM 13855 o-succinylbenzoate--CoA ligase YP_445479.1 1703485 D 309807 CDS YP_445480.1 83814781 3850873 1704921..1705679 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 1705679 3850873 SRU_1356 Salinibacter ruber DSM 13855 acetyltransferase YP_445480.1 1704921 D 309807 CDS YP_445481.1 83816046 3853156 complement(1705741..1706682) 1 NC_007677.1 identified by match to protein family HMM PF07228; transcriptional regulator 1706682 3853156 SRU_1357 Salinibacter ruber DSM 13855 transcriptional regulator YP_445481.1 1705741 R 309807 CDS YP_445482.1 83816840 3851151 complement(1706835..1707284) 1 NC_007677.1 identified by match to protein family HMM PF02518; hypothetical protein 1707284 3851151 SRU_1358 Salinibacter ruber DSM 13855 hypothetical protein YP_445482.1 1706835 R 309807 CDS YP_445483.1 83814481 3851800 complement(1707351..1707692) 1 NC_007677.1 identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-sigma B factor antagonist 1707692 3851800 SRU_1359 Salinibacter ruber DSM 13855 anti-sigma B factor antagonist YP_445483.1 1707351 R 309807 CDS YP_445484.1 83816391 3851731 1708182..1708649 1 NC_007677.1 hypothetical protein 1708649 3851731 SRU_1360 Salinibacter ruber DSM 13855 hypothetical protein YP_445484.1 1708182 D 309807 CDS YP_445485.1 83816638 3852092 1708775..1710922 1 NC_007677.1 hypothetical protein 1710922 3852092 SRU_1361 Salinibacter ruber DSM 13855 hypothetical protein YP_445485.1 1708775 D 309807 CDS YP_445486.1 83814421 3853005 1710919..1711704 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1711704 3853005 SRU_1362 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445486.1 1710919 D 309807 CDS YP_445487.1 83815597 3850778 1711732..1713675 1 NC_007677.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1713675 glmS 3850778 glmS Salinibacter ruber DSM 13855 glucosamine--fructose-6-phosphate aminotransferase YP_445487.1 1711732 D 309807 CDS YP_445488.1 83816205 3851818 1713883..1714956 1 NC_007677.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 1714956 prfA 3851818 prfA Salinibacter ruber DSM 13855 peptide chain release factor 1 YP_445488.1 1713883 D 309807 CDS YP_445489.1 83816197 3851810 1715034..1715642 1 NC_007677.1 identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 1715642 3851810 SRU_1365 Salinibacter ruber DSM 13855 30S ribosomal protein S6 YP_445489.1 1715034 D 309807 CDS YP_445490.1 83816823 3851133 1715696..1715908 1 NC_007677.1 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 1715908 rpsR 3851133 rpsR Salinibacter ruber DSM 13855 30S ribosomal protein S18 YP_445490.1 1715696 D 309807 CDS YP_445491.1 83816072 3853182 1715958..1716407 1 NC_007677.1 identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 1716407 rplI 3853182 rplI Salinibacter ruber DSM 13855 50S ribosomal protein L9 YP_445491.1 1715958 D 309807 CDS YP_445492.1 83815289 3850955 complement(1716863..1718011) 1 NC_007677.1 identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase MetC 1718011 3850955 SRU_1368 Salinibacter ruber DSM 13855 cystathionine beta-lyase MetC YP_445492.1 1716863 R 309807 CDS YP_445493.1 83814277 3850346 complement(1718032..1719726) 1 NC_007677.1 identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 1719726 dnaA 3850346 dnaA Salinibacter ruber DSM 13855 chromosomal replication initiator protein DnaA YP_445493.1 1718032 R 309807 CDS YP_445494.1 83816571 3851915 complement(1720011..1721165) 1 NC_007677.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263; 4-hydroxyphenylpyruvate dioxygenase 1721165 hppD 3851915 hppD Salinibacter ruber DSM 13855 4-hydroxyphenylpyruvate dioxygenase YP_445494.1 1720011 R 309807 CDS YP_445495.1 83815538 3852211 complement(1721257..1721991) 1 NC_007677.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB 1721991 3852211 SRU_1371 Salinibacter ruber DSM 13855 TonB YP_445495.1 1721257 R 309807 CDS YP_445496.1 83814849 3852786 1722145..1723158 1 NC_007677.1 identified by match to protein family HMM PF00107; zinc-binding alcohol dehydrogenase 1723158 3852786 SRU_1372 Salinibacter ruber DSM 13855 zinc-binding alcohol dehydrogenase YP_445496.1 1722145 D 309807 CDS YP_445497.1 83815343 3853189 1723266..1724492 1 NC_007677.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 1724492 3853189 SRU_1373 Salinibacter ruber DSM 13855 FAD dependent oxidoreductase YP_445497.1 1723266 D 309807 CDS YP_445498.1 83814738 3851492 1724513..1725064 1 NC_007677.1 hypothetical protein 1725064 3851492 SRU_1374 Salinibacter ruber DSM 13855 hypothetical protein YP_445498.1 1724513 D 309807 CDS YP_445499.1 83816211 3851824 complement(1725067..1728243) 1 NC_007677.1 Zn-dependent aminopeptidase 1728243 3851824 SRU_1375 Salinibacter ruber DSM 13855 Zn-dependent aminopeptidase YP_445499.1 1725067 R 309807 CDS YP_445500.1 83815611 3850674 1728316..1728420 1 NC_007677.1 hypothetical protein 1728420 3850674 SRU_1376 Salinibacter ruber DSM 13855 hypothetical protein YP_445500.1 1728316 D 309807 CDS YP_445501.1 83814878 3851300 1728439..1728741 1 NC_007677.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 1728741 3851300 SRU_1377 Salinibacter ruber DSM 13855 DNA-binding protein HU YP_445501.1 1728439 D 309807 CDS YP_445502.1 83814084 3850407 1728782..1730095 1 NC_007677.1 hypothetical protein 1730095 3850407 SRU_1378 Salinibacter ruber DSM 13855 hypothetical protein YP_445502.1 1728782 D 309807 CDS YP_445503.1 83814911 3852360 1730204..1730869 1 NC_007677.1 hypothetical protein 1730869 3852360 SRU_1379 Salinibacter ruber DSM 13855 hypothetical protein YP_445503.1 1730204 D 309807 CDS YP_445504.1 83814116 3851103 complement(1730905..1731321) 1 NC_007677.1 identified by match to protein family HMM PF00903; glyoxalase family protein 1731321 3851103 SRU_1380 Salinibacter ruber DSM 13855 glyoxalase family protein YP_445504.1 1730905 R 309807 CDS YP_445505.1 83816798 3851226 complement(1731355..1732878) 1 NC_007677.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; two-component system regulatory protein 1732878 pilR 3851226 pilR Salinibacter ruber DSM 13855 two-component system regulatory protein YP_445505.1 1731355 R 309807 CDS YP_445506.1 83816004 3851656 complement(1733027..1733437) 1 NC_007677.1 identified by match to protein family HMM PF01883; hypothetical protein 1733437 3851656 SRU_1382 Salinibacter ruber DSM 13855 hypothetical protein YP_445506.1 1733027 R 309807 CDS YP_445507.1 83815258 3853026 complement(1733579..1734004) 1 NC_007677.1 identified by match to protein family HMM PF02657; Fe-S metabolism associated domain-containing protein 1734004 sufE 3853026 sufE Salinibacter ruber DSM 13855 Fe-S metabolism associated domain-containing protein YP_445507.1 1733579 R 309807 CDS YP_445508.1 83814419 3853003 complement(1734084..1735340) 1 NC_007677.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; SufS subfamily cysteine desulfurase 1735340 sufS 3853003 sufS Salinibacter ruber DSM 13855 SufS subfamily cysteine desulfurase YP_445508.1 1734084 R 309807 CDS YP_445509.1 83814449 3852190 complement(1735419..1736759) 1 NC_007677.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 1736759 sufD 3852190 sufD Salinibacter ruber DSM 13855 FeS assembly protein SufD YP_445509.1 1735419 R 309807 CDS YP_445510.1 83815136 3852943 complement(1736850..1737620) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 1737620 sufC 3852943 sufC Salinibacter ruber DSM 13855 FeS assembly ATPase SufC YP_445510.1 1736850 R 309807 CDS YP_445511.1 83815188 3851769 complement(1737766..1739277) 1 NC_007677.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1739277 sufB 3851769 sufB Salinibacter ruber DSM 13855 cysteine desulfurase activator complex subunit SufB YP_445511.1 1737766 R 309807 CDS YP_445512.1 83816158 3851537 1739568..1739900 1 NC_007677.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; hesB family protein 1739900 3851537 SRU_1388 Salinibacter ruber DSM 13855 hesB family protein YP_445512.1 1739568 D 309807 CDS YP_445513.1 83816778 3851206 complement(1740509..1741054) 1 NC_007677.1 identified by match to protein family HMM PF02643; hypothetical protein 1741054 3851206 SRU_1389 Salinibacter ruber DSM 13855 hypothetical protein YP_445513.1 1740509 R 309807 CDS YP_445514.1 83814187 3850864 complement(1741051..1741431) 1 NC_007677.1 identified by match to protein family HMM PF02643; hypothetical protein 1741431 3850864 SRU_1390 Salinibacter ruber DSM 13855 hypothetical protein YP_445514.1 1741051 R 309807 CDS YP_445515.1 83814822 3852388 complement(1741557..1742108) 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 1742108 3852388 SRU_1391 Salinibacter ruber DSM 13855 acetyltransferase YP_445515.1 1741557 R 309807 CDS YP_445516.1 83815781 3852164 complement(1742110..1743231) 1 NC_007677.1 identified by match to protein family HMM PF06969; oxygen-independent coproporphyrinogen III oxidase 1743231 3852164 SRU_1392 Salinibacter ruber DSM 13855 oxygen-independent coproporphyrinogen III oxidase YP_445516.1 1742110 R 309807 CDS YP_445517.1 83814542 3852617 complement(1743242..1744324) 1 NC_007677.1 hypothetical protein 1744324 3852617 SRU_1393 Salinibacter ruber DSM 13855 hypothetical protein YP_445517.1 1743242 R 309807 CDS YP_445518.1 83816314 3851941 1744369..1745544 1 NC_007677.1 hypothetical protein 1745544 3851941 SRU_1394 Salinibacter ruber DSM 13855 hypothetical protein YP_445518.1 1744369 D 309807 CDS YP_445519.1 83815546 3852219 1745649..1746830 1 NC_007677.1 identified by match to protein family HMM PF00195; match to protein family HMM PF02797; chalcone synthase 1746830 3852219 SRU_1395 Salinibacter ruber DSM 13855 chalcone synthase YP_445519.1 1745649 D 309807 CDS YP_445520.1 83814951 3851334 complement(1746862..1749159) 1 NC_007677.1 hypothetical protein 1749159 3851334 SRU_1396 Salinibacter ruber DSM 13855 hypothetical protein YP_445520.1 1746862 R 309807 CDS YP_445521.1 83814506 3852443 1749328..1749606 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 1749606 3852443 SRU_1397 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_445521.1 1749328 D 309807 CDS YP_445522.1 83816061 3853171 1749570..1750046 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 1750046 3853171 SRU_1398 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_445522.1 1749570 D 309807 CDS YP_445523.1 83815426 3852275 complement(1750568..1751806) 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; N-acyl-L-amino acid amidohydrolase 1751806 3852275 SRU_1399 Salinibacter ruber DSM 13855 N-acyl-L-amino acid amidohydrolase YP_445523.1 1750568 R 309807 CDS YP_445524.1 83816192 3851805 complement(1751977..1754136) 1 NC_007677.1 hypothetical protein 1754136 3851805 SRU_1400 Salinibacter ruber DSM 13855 hypothetical protein YP_445524.1 1751977 R 309807 CDS YP_445525.1 83815564 3852237 complement(1754149..1755813) 1 NC_007677.1 identified by match to protein family HMM PF00082; subtilisin-like serine proteases 1755813 3852237 SRU_1401 Salinibacter ruber DSM 13855 subtilisin-like serine proteases YP_445525.1 1754149 R 309807 CDS YP_445526.1 83815626 3850689 complement(1755806..1756759) 1 NC_007677.1 identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+/Ca+ exchanger-like protein 1756759 3850689 SRU_1402 Salinibacter ruber DSM 13855 K+-dependent Na+/Ca+ exchanger-like protein YP_445526.1 1755806 R 309807 CDS YP_445527.1 83815011 3852422 complement(1756967..1758262) 1 NC_007677.1 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein 1758262 3852422 SRU_1403 Salinibacter ruber DSM 13855 cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein YP_445527.1 1756967 R 309807 CDS YP_445528.1 83814388 3851161 complement(1758409..1758822) 1 NC_007677.1 hypothetical protein 1758822 3851161 SRU_1404 Salinibacter ruber DSM 13855 hypothetical protein YP_445528.1 1758409 R 309807 CDS YP_445529.1 83816590 3853120 1759109..1759489 1 NC_007677.1 hypothetical protein 1759489 3853120 SRU_1405 Salinibacter ruber DSM 13855 hypothetical protein YP_445529.1 1759109 D 309807 CDS YP_445530.1 83815130 3852937 complement(1759624..1759761) 1 NC_007677.1 hypothetical protein 1759761 3852937 SRU_1406 Salinibacter ruber DSM 13855 hypothetical protein YP_445530.1 1759624 R 309807 CDS YP_445531.1 83814502 3851724 complement(1759861..1761357) 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 1761357 3851724 SRU_1407 Salinibacter ruber DSM 13855 outer membrane efflux protein YP_445531.1 1759861 R 309807 CDS YP_445532.1 83816716 3850833 complement(1761407..1762612) 1 NC_007677.1 HlyD family secretion protein 1762612 3850833 SRU_1408 Salinibacter ruber DSM 13855 HlyD family secretion protein YP_445532.1 1761407 R 309807 CDS YP_445533.1 83816252 3852915 complement(1762796..1765129) 1 NC_007677.1 identified by match to protein family HMM PF00005; toxin secretion ABC transporter ATP-binding protein 1765129 3852915 SRU_1409 Salinibacter ruber DSM 13855 toxin secretion ABC transporter ATP-binding protein YP_445533.1 1762796 R 309807 CDS YP_445534.1 83814821 3852387 complement(1765462..1767198) 1 NC_007677.1 hypothetical protein 1767198 3852387 SRU_1410 Salinibacter ruber DSM 13855 hypothetical protein YP_445534.1 1765462 R 309807 CDS YP_445535.1 83814272 3850341 1766284..1767171 1 NC_007677.1 identified by match to protein family HMM PF02569; match to protein family HMM TIGR00018; pantoate--beta-alanine ligase 1767171 panC 3850341 panC Salinibacter ruber DSM 13855 pantoate--beta-alanine ligase YP_445535.1 1766284 D 309807 CDS YP_445536.1 83816527 3852001 1767213..1767653 1 NC_007677.1 identified by match to protein family HMM PF02261; match to protein family HMM TIGR00223; aspartate 1-decarboxylase 1767653 panD 3852001 panD Salinibacter ruber DSM 13855 aspartate 1-decarboxylase YP_445536.1 1767213 D 309807 CDS YP_445537.1 83815898 3851588 1767934..1768788 1 NC_007677.1 identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase 1768788 3851588 SRU_1413 Salinibacter ruber DSM 13855 3-hydroxybutyryl-CoA dehydrogenase YP_445537.1 1767934 D 309807 CDS YP_445538.1 83814183 3850860 complement(1768902..1769864) 1 NC_007677.1 identified by match to protein family HMM PF02562; PhoH family protein 1769864 3850860 SRU_1414 Salinibacter ruber DSM 13855 PhoH family protein YP_445538.1 1768902 R 309807 CDS YP_445539.1 83814782 3850874 1769969..1770826 1 NC_007677.1 identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase 1770826 dapF 3850874 dapF Salinibacter ruber DSM 13855 diaminopimelate epimerase YP_445539.1 1769969 D 309807 CDS YP_445540.1 83816153 3850555 complement(1770858..1772933) 1 NC_007677.1 identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase 1772933 3850555 SRU_1416 Salinibacter ruber DSM 13855 peptidyl-prolyl cis-trans isomerase YP_445540.1 1770858 R 309807 CDS YP_445541.1 83815690 3850597 1773108..1774094 1 NC_007677.1 identified by match to protein family HMM PF06167; hypothetical protein 1774094 3850597 SRU_1418 Salinibacter ruber DSM 13855 hypothetical protein YP_445541.1 1773108 D 309807 CDS YP_445542.1 83816735 3852542 complement(1774087..1775328) 1 NC_007677.1 hypothetical protein 1775328 3852542 SRU_1417 Salinibacter ruber DSM 13855 hypothetical protein YP_445542.1 1774087 R 309807 CDS YP_445543.1 83814504 3851726 complement(1775432..1775692) 1 NC_007677.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1775692 rpmA 3851726 rpmA Salinibacter ruber DSM 13855 50S ribosomal protein L27 YP_445543.1 1775432 R 309807 CDS YP_445544.1 83814175 3850852 complement(1775742..1776260) 1 NC_007677.1 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 1776260 rplU 3850852 rplU Salinibacter ruber DSM 13855 50S ribosomal protein L21 YP_445544.1 1775742 R 309807 CDS YP_445545.1 83814759 3851689 1776285..1776947 1 NC_007677.1 identified by match to protein family HMM PF01557; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1776947 3851689 SRU_1421 Salinibacter ruber DSM 13855 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_445545.1 1776285 D 309807 CDS YP_445546.1 83816810 3851238 1777011..1777616 1 NC_007677.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 1777616 3851238 SRU_1422 Salinibacter ruber DSM 13855 pyridoxamine 5'-phosphate oxidase family protein YP_445546.1 1777011 D 309807 CDS YP_445547.1 83814595 3851075 complement(1777644..1778690) 1 NC_007677.1 identified by match to protein family HMM PF00155; match to protein family HMM PF01212; L-allo-threonine aldolase 1778690 ybjU 3851075 ybjU Salinibacter ruber DSM 13855 L-allo-threonine aldolase YP_445547.1 1777644 R 309807 CDS YP_445548.1 83814801 3852406 complement(1778729..1779223) 1 NC_007677.1 identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 1779223 greA 3852406 greA Salinibacter ruber DSM 13855 transcription elongation factor GreA YP_445548.1 1778729 R 309807 CDS YP_445549.1 83814193 3850634 complement(1779399..1780328) 1 NC_007677.1 identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein 1780328 3850634 SRU_1425 Salinibacter ruber DSM 13855 LD-carboxypeptidase family protein YP_445549.1 1779399 R 309807 CDS YP_445550.1 83815342 3853188 complement(1780373..1780744) 1 NC_007677.1 hypothetical protein 1780744 3853188 SRU_1426 Salinibacter ruber DSM 13855 hypothetical protein YP_445550.1 1780373 R 309807 CDS YP_445551.1 83814078 3850401 complement(1780784..1781884) 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1781884 3850401 SRU_1427 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_445551.1 1780784 R 309807 CDS YP_445552.1 83816610 3853140 complement(1781915..1782577) 1 NC_007677.1 hypothetical protein 1782577 3853140 SRU_1428 Salinibacter ruber DSM 13855 hypothetical protein YP_445552.1 1781915 R 309807 CDS YP_445553.1 83816065 3853175 complement(1782546..1783223) 1 NC_007677.1 acyltransferase 1783223 3853175 SRU_1429 Salinibacter ruber DSM 13855 acyltransferase YP_445553.1 1782546 R 309807 CDS YP_445554.1 83815220 3852301 complement(1783239..1784162) 1 NC_007677.1 identified by match to protein family HMM PF00494; phytoene synthase 1784162 crtB 3852301 crtB Salinibacter ruber DSM 13855 phytoene synthase YP_445554.1 1783239 R 309807 CDS YP_445555.1 83814427 3850713 complement(1784202..1785116) 1 NC_007677.1 hypothetical protein 1785116 3850713 SRU_1431 Salinibacter ruber DSM 13855 hypothetical protein YP_445555.1 1784202 R 309807 CDS YP_445556.1 83814328 3851531 1785067..1785948 1 NC_007677.1 hypothetical protein 1785948 3851531 SRU_1432 Salinibacter ruber DSM 13855 hypothetical protein YP_445556.1 1785067 D 309807 CDS YP_445557.1 83816517 3851991 1786047..1786604 1 NC_007677.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1786604 dcd 3851991 dcd Salinibacter ruber DSM 13855 deoxycytidine triphosphate deaminase YP_445557.1 1786047 D 309807 CDS YP_445558.1 83816806 3851234 1786613..1786942 1 NC_007677.1 hypothetical protein 1786942 3851234 SRU_1434 Salinibacter ruber DSM 13855 hypothetical protein YP_445558.1 1786613 D 309807 CDS YP_445559.1 83814614 3851466 complement(1786944..1787882) 1 NC_007677.1 identified by match to protein family HMM PF00701; dihydrodipicolinate synthase 1787882 3851466 SRU_1435 Salinibacter ruber DSM 13855 dihydrodipicolinate synthase YP_445559.1 1786944 R 309807 CDS YP_445560.1 83814204 3850645 complement(1787966..1788796) 1 NC_007677.1 identified by match to protein family HMM PF02535; gufA protein 1788796 gufA 3850645 gufA Salinibacter ruber DSM 13855 gufA protein YP_445560.1 1787966 R 309807 CDS YP_445561.1 83814804 3852409 1788947..1789393 1 NC_007677.1 hypothetical protein 1789393 3852409 SRU_1437 Salinibacter ruber DSM 13855 hypothetical protein YP_445561.1 1788947 D 309807 CDS YP_445562.1 83814138 3850931 1789582..1790127 1 NC_007677.1 hypothetical protein 1790127 3850931 SRU_1438 Salinibacter ruber DSM 13855 hypothetical protein YP_445562.1 1789582 D 309807 CDS YP_445563.1 83814886 3851308 complement(1790222..1790962) 1 NC_007677.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1790962 clpP 3851308 clpP Salinibacter ruber DSM 13855 ATP-dependent Clp protease proteolytic subunit YP_445563.1 1790222 R 309807 CDS YP_445564.1 83815702 3850609 1791188..1792120 1 NC_007677.1 identified by match to protein family HMM PF03767; acid phosphatase 1792120 lppC 3850609 lppC Salinibacter ruber DSM 13855 acid phosphatase YP_445564.1 1791188 D 309807 CDS YP_445565.2 161986630 3852858 1792122..1793813 1 NC_007677.1 contains 3'-5'exonuclease domain; hypothetical protein 1793813 3852858 SRU_1441 Salinibacter ruber DSM 13855 hypothetical protein YP_445565.2 1792122 D 309807 CDS YP_445566.1 83814409 3852993 1794054..1795661 1 NC_007677.1 identified by match to protein family HMM PF01966; match to protein family HMM PF02541; exopolyphosphatase 1795661 ppx 3852993 ppx Salinibacter ruber DSM 13855 exopolyphosphatase YP_445566.1 1794054 D 309807 CDS YP_445567.1 83815364 3850660 1795746..1796369 1 NC_007677.1 identified by match to protein family HMM PF00499; NADH dehydrogenase i, j subunit 1796369 nuoJ 3850660 nuoJ Salinibacter ruber DSM 13855 NADH dehydrogenase i, j subunit YP_445567.1 1795746 D 309807 CDS YP_445568.1 83815894 3851584 1796485..1796790 1 NC_007677.1 identified by match to protein family HMM PF00420; NADH dehydrogenase i, k subunit 1796790 nuoK 3851584 nuoK Salinibacter ruber DSM 13855 NADH dehydrogenase i, k subunit YP_445568.1 1796485 D 309807 CDS YP_445569.1 83816540 3851883 1796846..1798843 1 NC_007677.1 identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974; NADH dehydrogenase I subunit L 1798843 nuoL 3851883 nuoL Salinibacter ruber DSM 13855 NADH dehydrogenase I subunit L YP_445569.1 1796846 D 309807 CDS YP_445570.1 83815949 3850447 1798965..1800602 1 NC_007677.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972; NADH dehydrogenase i, m subunit 1800602 nuoM 3850447 nuoM Salinibacter ruber DSM 13855 NADH dehydrogenase i, m subunit YP_445570.1 1798965 D 309807 CDS YP_445571.1 83816811 3851239 1800599..1800985 1 NC_007677.1 identified by match to protein family HMM PF01329; pterin-4-alpha-carbinolamine dehydratase 1800985 3851239 SRU_1447 Salinibacter ruber DSM 13855 pterin-4-alpha-carbinolamine dehydratase YP_445571.1 1800599 D 309807 CDS YP_445572.1 83814574 3852963 1801071..1802570 1 NC_007677.1 identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770; proton-translocating NADH-quinone oxidoreductase chain N 1802570 3852963 SRU_1448 Salinibacter ruber DSM 13855 proton-translocating NADH-quinone oxidoreductase chain N YP_445572.1 1801071 D 309807 CDS YP_445573.1 83814845 3852782 1802628..1803182 1 NC_007677.1 hypothetical protein 1803182 3852782 SRU_1449 Salinibacter ruber DSM 13855 hypothetical protein YP_445573.1 1802628 D 309807 CDS YP_445574.1 83815470 3853064 complement(1803212..1804891) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199; nitrogen regulatory protein C 1804891 3853064 SRU_1450 Salinibacter ruber DSM 13855 nitrogen regulatory protein C YP_445574.1 1803212 R 309807 CDS YP_445575.1 83816461 3852828 complement(1804895..1806352) 1 NC_007677.1 identified by match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF07568; match to protein family HMM TIGR00229; response regulator 1806352 3852828 SRU_1451 Salinibacter ruber DSM 13855 response regulator YP_445575.1 1804895 R 309807 CDS YP_445576.1 83814295 3851087 1806594..1808201 1 NC_007677.1 hypothetical protein 1808201 3851087 SRU_1452 Salinibacter ruber DSM 13855 hypothetical protein YP_445576.1 1806594 D 309807 CDS YP_445577.1 83815977 3852714 1808331..1808921 1 NC_007677.1 hypothetical protein 1808921 3852714 SRU_1453 Salinibacter ruber DSM 13855 hypothetical protein YP_445577.1 1808331 D 309807 CDS YP_445578.1 83815438 3850735 1809113..1810978 1 NC_007677.1 hypothetical protein 1810978 3850735 SRU_1454 Salinibacter ruber DSM 13855 hypothetical protein YP_445578.1 1809113 D 309807 CDS YP_445579.1 83815929 3850427 complement(1810998..1812947) 1 NC_007677.1 identified by match to protein family HMM PF00069; protein kinase domain-containing protein 1812947 3850427 SRU_1455 Salinibacter ruber DSM 13855 protein kinase domain-containing protein YP_445579.1 1810998 R 309807 CDS YP_445580.1 83816545 3851889 complement(1813040..1814494) 1 NC_007677.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase aldX 1814494 3851889 SRU_1456 Salinibacter ruber DSM 13855 aldehyde dehydrogenase aldX YP_445580.1 1813040 R 309807 CDS YP_445581.1 83815921 3850419 1814673..1815299 1 NC_007677.1 identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 1815299 pncA 3850419 pncA Salinibacter ruber DSM 13855 pyrazinamidase/nicotinamidase YP_445581.1 1814673 D 309807 CDS YP_445582.1 83816617 3852071 complement(1815335..1816924) 1 NC_007677.1 hypothetical protein 1816924 3852071 SRU_1458 Salinibacter ruber DSM 13855 hypothetical protein YP_445582.1 1815335 R 309807 CDS YP_445583.1 83815066 3851295 complement(1816929..1819088) 1 NC_007677.1 identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; fatty oxidation complex subunit alpha 1819088 yfcX 3851295 yfcX Salinibacter ruber DSM 13855 fatty oxidation complex subunit alpha YP_445583.1 1816929 R 309807 CDS YP_445584.1 83815618 3850681 complement(1819136..1820518) 1 NC_007677.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; fatty oxidation complex subunit beta 1820518 hadHB 3850681 hadHB Salinibacter ruber DSM 13855 fatty oxidation complex subunit beta YP_445584.1 1819136 R 309807 CDS YP_445585.1 83816243 3852906 1820639..1821400 1 NC_007677.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase 1821400 3852906 SRU_1461 Salinibacter ruber DSM 13855 RNA methyltransferase YP_445585.1 1820639 D 309807 CDS YP_445586.1 83814750 3851368 1821854..1823803 1 NC_007677.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1823803 3851368 SRU_1462 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_445586.1 1821854 D 309807 CDS YP_445587.1 83815283 3850949 complement(1823881..1825455) 1 NC_007677.1 identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1825455 glpA 3850949 glpA Salinibacter ruber DSM 13855 glycerol-3-phosphate dehydrogenase YP_445587.1 1823881 R 309807 CDS YP_445588.1 83814333 3851380 complement(1825681..1827141) 1 NC_007677.1 hypothetical protein 1827141 3851380 SRU_1464 Salinibacter ruber DSM 13855 hypothetical protein YP_445588.1 1825681 R 309807 CDS YP_445589.1 83814956 3851261 complement(1827126..1828775) 1 NC_007677.1 sugar ABC transporter periplasmic sugar-binding protein 1828775 3851261 SRU_1465 Salinibacter ruber DSM 13855 sugar ABC transporter periplasmic sugar-binding protein YP_445589.1 1827126 R 309807 CDS YP_445590.1 83814377 3851248 complement(1829421..1829711) 1 NC_007677.1 hypothetical protein 1829711 3851248 SRU_1466 Salinibacter ruber DSM 13855 hypothetical protein YP_445590.1 1829421 R 309807 CDS YP_445591.1 83816582 3853112 complement(1829763..1830557) 1 NC_007677.1 identified by match to protein family HMM PF00528; sugar ABC transporter permease 1830557 3853112 SRU_1467 Salinibacter ruber DSM 13855 sugar ABC transporter permease YP_445591.1 1829763 R 309807 CDS YP_445592.1 83815980 3852717 complement(1830554..1831420) 1 NC_007677.1 identified by match to protein family HMM PF00528; ABC transporter permease 1831420 3852717 SRU_1468 Salinibacter ruber DSM 13855 ABC transporter permease YP_445592.1 1830554 R 309807 CDS YP_445593.1 83815398 3852973 complement(1831465..1832583) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1832583 3852973 SRU_1469 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445593.1 1831465 R 309807 CDS YP_445594.1 83814716 3851509 complement(1832599..1833714) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1833714 3851509 SRU_1470 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_445594.1 1832599 R 309807 CDS YP_445595.1 83814170 3850493 complement(1833775..1835355) 1 NC_007677.1 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase 1835355 glpK 3850493 glpK Salinibacter ruber DSM 13855 glycerol kinase YP_445595.1 1833775 R 309807 CDS YP_445596.1 83816374 3851870 1835926..1836711 1 NC_007677.1 identified by match to protein family HMM PF00165; transcriptional regulator 1836711 3851870 SRU_1472 Salinibacter ruber DSM 13855 transcriptional regulator YP_445596.1 1835926 D 309807 CDS YP_445597.1 83814066 3852470 1836791..1837816 1 NC_007677.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1837816 gpsA 3852470 gpsA Salinibacter ruber DSM 13855 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_445597.1 1836791 D 309807 CDS YP_445598.1 83815956 3850454 1837885..1838955 1 NC_007677.1 identified by match to protein family HMM PF00316; fructose-1,6-bisphosphatase 1838955 fbp 3850454 fbp Salinibacter ruber DSM 13855 fructose-1,6-bisphosphatase YP_445598.1 1837885 D 309807 CDS YP_445599.1 83814156 3850479 1839019..1839783 1 NC_007677.1 hypothetical protein 1839783 3850479 SRU_1475 Salinibacter ruber DSM 13855 hypothetical protein YP_445599.1 1839019 D 309807 CDS YP_445600.1 83814573 3852962 1839811..1840665 1 NC_007677.1 identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase family protein 1840665 3852962 SRU_1476 Salinibacter ruber DSM 13855 enoyl-CoA hydratase/isomerase family protein YP_445600.1 1839811 D 309807 CDS YP_445601.1 83815111 3852642 1840846..1842822 1 NC_007677.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1842822 3852642 SRU_1477 Salinibacter ruber DSM 13855 aconitate hydratase YP_445601.1 1840846 D 309807 CDS YP_445602.1 83814125 3851112 1842935..1843744 1 NC_007677.1 hypothetical protein 1843744 3851112 SRU_1478 Salinibacter ruber DSM 13855 hypothetical protein YP_445602.1 1842935 D 309807 CDS YP_445603.1 83816662 3852663 1843788..1844801 1 NC_007677.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1844801 purM 3852663 purM Salinibacter ruber DSM 13855 phosphoribosylaminoimidazole synthetase YP_445603.1 1843788 D 309807 CDS YP_445604.1 83815885 3851574 1844965..1845654 1 NC_007677.1 identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; membrane protein 1845654 3851574 SRU_1480 Salinibacter ruber DSM 13855 membrane protein YP_445604.1 1844965 D 309807 CDS YP_445605.1 83816049 3853159 1845660..1846814 1 NC_007677.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1846814 gpsA 3853159 gpsA Salinibacter ruber DSM 13855 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_445605.1 1845660 D 309807 CDS YP_445606.1 83815277 3851058 1847065..1847580 1 NC_007677.1 hypothetical protein 1847580 3851058 SRU_1482 Salinibacter ruber DSM 13855 hypothetical protein YP_445606.1 1847065 D 309807 CDS YP_445607.1 83816214 3851827 1847913..1850246 1 NC_007677.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063; type II DNA topoisomerase, A subunit 1850246 3851827 SRU_1483 Salinibacter ruber DSM 13855 type II DNA topoisomerase, A subunit YP_445607.1 1847913 D 309807 CDS YP_445608.1 83815720 3850627 1850303..1852234 1 NC_007677.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; match to protein family HMM TIGR01055; match to protein family HMM TIGR01058; match to protein family HMM TIGR01059; type II DNA topoisomerase, B subunit 1852234 3850627 SRU_1484 Salinibacter ruber DSM 13855 type II DNA topoisomerase, B subunit YP_445608.1 1850303 D 309807 CDS YP_445609.1 83816390 3851730 1852762..1853130 1 NC_007677.1 hypothetical protein 1853130 3851730 SRU_1486 Salinibacter ruber DSM 13855 hypothetical protein YP_445609.1 1852762 D 309807 CDS YP_445610.1 83815674 3851011 complement(1853603..1854043) 1 NC_007677.1 hypothetical protein 1854043 3851011 SRU_1487 Salinibacter ruber DSM 13855 hypothetical protein YP_445610.1 1853603 R 309807 CDS YP_445611.1 83814216 3850461 complement(1854270..1854656) 1 NC_007677.1 hypothetical protein 1854656 3850461 SRU_1488 Salinibacter ruber DSM 13855 hypothetical protein YP_445611.1 1854270 R 309807 CDS YP_445612.1 83816654 3852108 complement(1854852..1855916) 1 NC_007677.1 hypothetical protein 1855916 3852108 SRU_1489 Salinibacter ruber DSM 13855 hypothetical protein YP_445612.1 1854852 R 309807 CDS YP_445613.1 83816037 3853147 1856622..1857776 1 NC_007677.1 hypothetical protein 1857776 3853147 SRU_1490 Salinibacter ruber DSM 13855 hypothetical protein YP_445613.1 1856622 D 309807 CDS YP_445614.1 83815792 3852175 complement(1858832..1859614) 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; protein nagD 1859614 3852175 SRU_1491 Salinibacter ruber DSM 13855 protein nagD YP_445614.1 1858832 R 309807 CDS YP_445615.1 83814463 3852204 complement(1859688..1860062) 1 NC_007677.1 hypothetical protein 1860062 3852204 SRU_1492 Salinibacter ruber DSM 13855 hypothetical protein YP_445615.1 1859688 R 309807 CDS YP_445616.1 83816102 3850582 1860181..1860852 1 NC_007677.1 hypothetical protein 1860852 3850582 SRU_1493 Salinibacter ruber DSM 13855 hypothetical protein YP_445616.1 1860181 D 309807 CDS YP_445617.1 83816819 3851129 1860911..1861657 1 NC_007677.1 identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 1861657 scpB 3851129 scpB Salinibacter ruber DSM 13855 segregation and condensation protein B YP_445617.1 1860911 D 309807 CDS YP_445618.1 83815539 3852212 1861703..1862452 1 NC_007677.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 1862452 rluB 3852212 rluB Salinibacter ruber DSM 13855 ribosomal large subunit pseudouridine synthase B YP_445618.1 1861703 D 309807 CDS YP_445619.1 83814923 3850975 1862465..1863991 1 NC_007677.1 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 1863991 guaB 3850975 guaB Salinibacter ruber DSM 13855 inosine-5'-monophosphate dehydrogenase YP_445619.1 1862465 D 309807 CDS YP_445620.1 83814771 3851701 1864039..1865109 1 NC_007677.1 identified by match to protein family HMM PF00557; aminopeptidase P 1865109 3851701 SRU_1497 Salinibacter ruber DSM 13855 aminopeptidase P YP_445620.1 1864039 D 309807 CDS YP_445621.1 83816425 3851765 1865444..1866586 1 NC_007677.1 hypothetical protein 1866586 3851765 SRU_1499 Salinibacter ruber DSM 13855 hypothetical protein YP_445621.1 1865444 D 309807 CDS YP_445622.1 83814321 3851524 complement(1866556..1867530) 1 NC_007677.1 identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 1867530 miaA 3851524 miaA Salinibacter ruber DSM 13855 tRNA delta(2)-isopentenylpyrophosphate transferase YP_445622.1 1866556 R 309807 CDS YP_445623.1 83815260 3853028 complement(1867709..1868530) 1 NC_007677.1 identified by match to protein family HMM PF01036; xanthorhodopsin 1868530 3853028 SRU_1500 Salinibacter ruber DSM 13855 xanthorhodopsin YP_445623.1 1867709 R 309807 CDS YP_445624.1 83815263 3851044 complement(1868758..1869513) 1 NC_007677.1 identified by similarity to GB:CAB86388.1; licopene beta-cyclase 1869513 crtY 3851044 crtY Salinibacter ruber DSM 13855 licopene beta-cyclase YP_445624.1 1868758 R 309807 CDS YP_445625.1 83814467 3851786 complement(1869548..1871080) 1 NC_007677.1 identified by similarity to GB:BAC88335.1; match to protein family HMM PF01266; beta-carotene ketolase 1871080 crtO 3851786 crtO Salinibacter ruber DSM 13855 beta-carotene ketolase YP_445625.1 1869548 R 309807 CDS YP_445626.1 83816765 3852572 1871524..1872162 1 NC_007677.1 identified by match to protein family HMM PF04199; cyclase superfamily protein 1872162 3852572 SRU_1503 Salinibacter ruber DSM 13855 cyclase superfamily protein YP_445626.1 1871524 D 309807 CDS YP_445627.1 83814691 3853099 1872459..1873673 1 NC_007677.1 hypothetical protein 1873673 3853099 SRU_1504 Salinibacter ruber DSM 13855 hypothetical protein YP_445627.1 1872459 D 309807 CDS YP_445628.1 83815580 3850761 1873808..1874716 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase domain/SAM domain-containing protein 1874716 3850761 SRU_1505 Salinibacter ruber DSM 13855 phage integrase domain/SAM domain-containing protein YP_445628.1 1873808 D 309807 CDS YP_445629.1 83815097 3850507 1875379..1876314 1 NC_007677.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; tyrosine recombinase XerC 1876314 3850507 SRU_1506 Salinibacter ruber DSM 13855 tyrosine recombinase XerC YP_445629.1 1875379 D 309807 CDS YP_445630.1 83816555 3851899 complement(1876321..1877235) 1 NC_007677.1 hypothetical protein 1877235 3851899 SRU_1507 Salinibacter ruber DSM 13855 hypothetical protein YP_445630.1 1876321 R 309807 CDS YP_445631.1 83815948 3850446 complement(1877264..1877635) 1 NC_007677.1 hypothetical protein 1877635 3850446 SRU_1508 Salinibacter ruber DSM 13855 hypothetical protein YP_445631.1 1877264 R 309807 CDS YP_445632.1 83815944 3850442 complement(1877681..1878709) 1 NC_007677.1 identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 1878709 3850442 SRU_1509 Salinibacter ruber DSM 13855 zinc-binding dehydrogenase family oxidoreductase YP_445632.1 1877681 R 309807 CDS YP_445633.1 83815284 3850950 complement(1878759..1880126) 1 NC_007677.1 identified by match to protein family HMM PF00925; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00505; riboflavin-specific deaminase/GTP cyclohydrolase II 1880126 3850950 SRU_1510 Salinibacter ruber DSM 13855 riboflavin-specific deaminase/GTP cyclohydrolase II YP_445633.1 1878759 R 309807 CDS YP_445634.1 83814674 3852259 1880528..1881343 1 NC_007677.1 hypothetical protein 1881343 3852259 SRU_1511 Salinibacter ruber DSM 13855 hypothetical protein YP_445634.1 1880528 D 309807 CDS YP_445635.1 83816364 3851860 1881385..1882425 1 NC_007677.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; HTH-type transcriptional regulator celR 1882425 3851860 SRU_1512 Salinibacter ruber DSM 13855 HTH-type transcriptional regulator celR YP_445635.1 1881385 D 309807 CDS YP_445636.1 83814469 3851788 1882537..1883511 1 NC_007677.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1883511 purC 3851788 purC Salinibacter ruber DSM 13855 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_445636.1 1882537 D 309807 CDS YP_445637.1 83816508 3851982 complement(1883508..1884353) 1 NC_007677.1 identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 1884353 3851982 SRU_1513 Salinibacter ruber DSM 13855 carbon-nitrogen family hydrolase YP_445637.1 1883508 R 309807 CDS YP_445638.1 83816794 3851222 complement(1884579..1885079) 1 NC_007677.1 identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein 1885079 3851222 SRU_1515 Salinibacter ruber DSM 13855 anti-oxidant AhpCTSA family protein YP_445638.1 1884579 R 309807 CDS YP_445639.1 83814405 3851178 complement(1885132..1886490) 1 NC_007677.1 identified by match to protein family HMM PF02687; permease 1886490 3851178 SRU_1516 Salinibacter ruber DSM 13855 permease YP_445639.1 1885132 R 309807 CDS YP_445640.1 83814842 3852779 1886563..1888251 1 NC_007677.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236; 1-pyrroline-5-carboxylate dehydrogenase 1888251 pruA 3852779 pruA Salinibacter ruber DSM 13855 1-pyrroline-5-carboxylate dehydrogenase YP_445640.1 1886563 D 309807 CDS YP_445641.1 83816023 3851675 1888315..1888785 1 NC_007677.1 hypothetical protein 1888785 3851675 SRU_1518 Salinibacter ruber DSM 13855 hypothetical protein YP_445641.1 1888315 D 309807 CDS YP_445642.1 83816495 3852864 1888812..1889792 1 NC_007677.1 identified by match to protein family HMM PF00392; GntR family transcriptional regulator protein 1889792 3852864 SRU_1519 Salinibacter ruber DSM 13855 GntR family transcriptional regulator protein YP_445642.1 1888812 D 309807 CDS YP_445643.1 83814108 3850921 complement(1889800..1892427) 1 NC_007677.1 identified by match to protein family HMM PF01966; match to protein family HMM PF07698; match to protein family HMM TIGR00277; hypothetical protein 1892427 3850921 SRU_1520 Salinibacter ruber DSM 13855 hypothetical protein YP_445643.1 1889800 R 309807 CDS YP_445644.1 83814451 3852192 complement(1892560..1893735) 1 NC_007677.1 hypothetical protein 1893735 3852192 SRU_1521 Salinibacter ruber DSM 13855 hypothetical protein YP_445644.1 1892560 R 309807 CDS YP_445645.1 83815227 3851028 complement(1894245..1895471) 1 NC_007677.1 identified by match to protein family HMM PF02566; OsmC-like protein 1895471 3851028 SRU_1523 Salinibacter ruber DSM 13855 OsmC-like protein YP_445645.1 1894245 R 309807 CDS YP_445646.1 83816154 3851533 complement(1895506..1896285) 1 NC_007677.1 identified by match to protein family HMM PF05742; hypothetical protein 1896285 3851533 SRU_1524 Salinibacter ruber DSM 13855 hypothetical protein YP_445646.1 1895506 R 309807 CDS YP_445647.1 83814943 3851326 complement(1896350..1896928) 1 NC_007677.1 identified by match to protein family HMM PF06962; rRNA methylase 1896928 3851326 SRU_1525 Salinibacter ruber DSM 13855 rRNA methylase YP_445647.1 1896350 R 309807 CDS YP_445648.1 83814732 3851486 1897074..1898177 1 NC_007677.1 identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1898177 aroB 3851486 aroB Salinibacter ruber DSM 13855 3-dehydroquinate synthase YP_445648.1 1897074 D 309807 CDS YP_445649.1 83816831 3851141 1898388..1903112 1 NC_007677.1 hypothetical protein 1903112 3851141 SRU_1527 Salinibacter ruber DSM 13855 hypothetical protein YP_445649.1 1898388 D 309807 CDS YP_445650.1 83815922 3850420 1903348..1905348 1 NC_007677.1 identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 1905348 rnr 3850420 rnr Salinibacter ruber DSM 13855 ribonuclease R YP_445650.1 1903348 D 309807 CDS YP_445651.1 83815311 3852140 complement(1905414..1906748) 1 NC_007677.1 identified by match to protein family HMM PF06245; hypothetical protein 1906748 3852140 SRU_1529 Salinibacter ruber DSM 13855 hypothetical protein YP_445651.1 1905414 R 309807 CDS YP_445652.1 83815794 3852177 complement(1907187..1907942) 1 NC_007677.1 identified by match to protein family HMM PF01569; PAP2 superfamily protein 1907942 3852177 SRU_1530 Salinibacter ruber DSM 13855 PAP2 superfamily protein YP_445652.1 1907187 R 309807 CDS YP_445653.1 83816684 3852685 complement(1907949..1909010) 1 NC_007677.1 identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; recA protein 1909010 recA 3852685 recA Salinibacter ruber DSM 13855 recA protein YP_445653.1 1907949 R 309807 CDS YP_445654.1 83814243 3852591 complement(1909231..1909962) 1 NC_007677.1 hypothetical protein 1909962 3852591 SRU_1532 Salinibacter ruber DSM 13855 hypothetical protein YP_445654.1 1909231 R 309807 CDS YP_445655.1 83815039 3852628 1910382..1911173 1 NC_007677.1 hypothetical protein 1911173 3852628 SRU_1533 Salinibacter ruber DSM 13855 hypothetical protein YP_445655.1 1910382 D 309807 CDS YP_445656.1 83815183 3850378 1911109..1913289 1 NC_007677.1 hypothetical protein 1913289 3850378 SRU_1534 Salinibacter ruber DSM 13855 hypothetical protein YP_445656.1 1911109 D 309807 CDS YP_445657.1 83814432 3850718 1913339..1913878 1 NC_007677.1 identified by match to protein family HMM PF00072; response regulator 1913878 3850718 SRU_1535 Salinibacter ruber DSM 13855 response regulator YP_445657.1 1913339 D 309807 CDS YP_445658.1 83815243 3853011 complement(1913970..1914512) 1 NC_007677.1 hypothetical protein 1914512 3853011 SRU_1536 Salinibacter ruber DSM 13855 hypothetical protein YP_445658.1 1913970 R 309807 CDS YP_445659.1 83816039 3853149 1914840..1915400 1 NC_007677.1 hypothetical protein 1915400 3853149 SRU_1537 Salinibacter ruber DSM 13855 hypothetical protein YP_445659.1 1914840 D 309807 CDS YP_445660.1 83816750 3852557 1915893..1916843 1 NC_007677.1 identified by match to protein family HMM PF03009; glycerophosphodiester phosphodiesterase 1916843 3852557 SRU_1538 Salinibacter ruber DSM 13855 glycerophosphodiester phosphodiesterase YP_445660.1 1915893 D 309807 CDS YP_445661.1 83814230 3850475 complement(1916857..1917978) 1 NC_007677.1 identified by match to protein family HMM PF00817; DNA polymerase IV 1917978 3850475 SRU_1539 Salinibacter ruber DSM 13855 DNA polymerase IV YP_445661.1 1916857 R 309807 CDS YP_445662.1 83815094 3850504 complement(1918501..1919397) 1 NC_007677.1 hypothetical protein 1919397 3850504 SRU_1540 Salinibacter ruber DSM 13855 hypothetical protein YP_445662.1 1918501 R 309807 CDS YP_445663.1 83815502 3852312 1920243..1920893 1 NC_007677.1 hypothetical protein 1920893 3852312 SRU_1541 Salinibacter ruber DSM 13855 hypothetical protein YP_445663.1 1920243 D 309807 CDS YP_445664.1 83815845 3852503 complement(1921112..1922560) 1 NC_007677.1 hypothetical protein 1922560 3852503 SRU_1542 Salinibacter ruber DSM 13855 hypothetical protein YP_445664.1 1921112 R 309807 CDS YP_445665.1 83814294 3851086 complement(1923136..1926036) 1 NC_007677.1 identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanyl-tRNA synthetase 1926036 alaS 3851086 alaS Salinibacter ruber DSM 13855 alanyl-tRNA synthetase YP_445665.1 1923136 R 309807 CDS YP_445666.1 83814740 3851358 complement(1926298..1926918) 1 NC_007677.1 identified by similarity to SP:Q39147; match to protein family HMM PF02245; match to protein family HMM TIGR00567; DNA-3-methyladenine glycosylase 1926918 3851358 SRU_1545 Salinibacter ruber DSM 13855 DNA-3-methyladenine glycosylase YP_445666.1 1926298 R 309807 CDS YP_445667.1 83815440 3850737 1926998..1927939 1 NC_007677.1 hypothetical protein 1927939 3850737 SRU_1546 Salinibacter ruber DSM 13855 hypothetical protein YP_445667.1 1926998 D 309807 CDS YP_445668.1 83814643 3851417 complement(1927960..1929150) 1 NC_007677.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 1929150 3851417 SRU_1547 Salinibacter ruber DSM 13855 acetyl-CoA acetyltransferase YP_445668.1 1927960 R 309807 CDS YP_445669.1 83816674 3852675 complement(1929208..1931313) 1 NC_007677.1 identified by match to protein family HMM PF03190; hypothetical protein 1931313 3852675 SRU_1548 Salinibacter ruber DSM 13855 hypothetical protein YP_445669.1 1929208 R 309807 CDS YP_445670.1 83816492 3852861 complement(1931366..1934089) 1 NC_007677.1 identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein 1934089 3852861 SRU_1549 Salinibacter ruber DSM 13855 zinc-dependent carboxypeptidase domain-containing protein YP_445670.1 1931366 R 309807 CDS YP_445671.1 83816817 3851127 complement(1934090..1935508) 1 NC_007677.1 identified by match to protein family HMM PF05161; hydroxypyruvate reductase 1935508 3851127 SRU_1550 Salinibacter ruber DSM 13855 hydroxypyruvate reductase YP_445671.1 1934090 R 309807 CDS YP_445672.1 83814926 3850978 1935430..1936722 1 NC_007677.1 hypothetical protein 1936722 3850978 SRU_1551 Salinibacter ruber DSM 13855 hypothetical protein YP_445672.1 1935430 D 309807 CDS YP_445673.1 83814327 3851530 1936836..1937519 1 NC_007677.1 identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 1937519 thiE 3851530 thiE Salinibacter ruber DSM 13855 thiamine-phosphate pyrophosphorylase YP_445673.1 1936836 D 309807 CDS YP_445674.1 83816546 3851890 complement(1937521..1938309) 1 NC_007677.1 identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase 1938309 hemD 3851890 hemD Salinibacter ruber DSM 13855 uroporphyrinogen-III synthase YP_445674.1 1937521 R 309807 CDS YP_445675.1 83815900 3851590 complement(1938310..1939281) 1 NC_007677.1 identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212; porphobilinogen deaminase 1939281 hemC 3851590 hemC Salinibacter ruber DSM 13855 porphobilinogen deaminase YP_445675.1 1938310 R 309807 CDS YP_445676.1 83814361 3851349 complement(1939392..1940852) 1 NC_007677.1 identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035; glutamyl-tRNA reductase 1940852 hemA 3851349 hemA Salinibacter ruber DSM 13855 glutamyl-tRNA reductase YP_445676.1 1939392 R 309807 CDS YP_445677.1 83815567 3852240 complement(1940918..1941748) 1 NC_007677.1 identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 1941748 mtnN 3852240 mtnN Salinibacter ruber DSM 13855 MTA/SAH nucleosidase YP_445677.1 1940918 R 309807 CDS YP_445678.1 83814986 3851195 complement(1942288..1944429) 1 NC_007677.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1944429 metG 3851195 metG Salinibacter ruber DSM 13855 methionyl-tRNA synthetase YP_445678.1 1942288 R 309807 CDS YP_445679.1 83814334 3851381 complement(1944602..1945081) 1 NC_007677.1 hypothetical protein 1945081 3851381 SRU_1558 Salinibacter ruber DSM 13855 hypothetical protein YP_445679.1 1944602 R 309807 CDS YP_445680.1 83815033 3852622 1945096..1945704 1 NC_007677.1 identified by match to protein family HMM PF00475; imidazoleglycerol-phosphate dehydratase 1945704 hisB 3852622 hisB Salinibacter ruber DSM 13855 imidazoleglycerol-phosphate dehydratase YP_445680.1 1945096 D 309807 CDS YP_445681.1 83814263 3852492 1945831..1946649 1 NC_007677.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 1946649 proC 3852492 proC Salinibacter ruber DSM 13855 pyrroline-5-carboxylate reductase YP_445681.1 1945831 D 309807 CDS YP_445682.1 83816780 3851208 1946733..1947389 1 NC_007677.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07685; match to protein family HMM TIGR01855; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1947389 hisH 3851208 hisH Salinibacter ruber DSM 13855 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_445682.1 1946733 D 309807 CDS YP_445683.1 83815846 3852504 complement(1947429..1947557) 1 NC_007677.1 hypothetical protein 1947557 3852504 SRU_1562 Salinibacter ruber DSM 13855 hypothetical protein YP_445683.1 1947429 R 309807 CDS YP_445684.1 83814144 3850937 complement(1947777..1948268) 1 NC_007677.1 identified by match to protein family HMM PF00313; cold shock-like protein cspG 1948268 3850937 SRU_1563 Salinibacter ruber DSM 13855 cold shock-like protein cspG YP_445684.1 1947777 R 309807 CDS YP_445685.1 83814747 3851365 1948281..1949057 1 NC_007677.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1949057 hisA 3851365 hisA Salinibacter ruber DSM 13855 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_445685.1 1948281 D 309807 CDS YP_445686.1 83815743 3852751 1949098..1949904 1 NC_007677.1 identified by match to protein family HMM PF00977; match to protein family HMM TIGR00735; Imidazole glycerol phosphate synthase cyclase subunit 1949904 hisF 3852751 hisF Salinibacter ruber DSM 13855 Imidazole glycerol phosphate synthase cyclase subunit YP_445686.1 1949098 D 309807 CDS YP_445687.1 83816504 3851978 1949954..1950211 1 NC_007677.1 ABC transporter permease 1950211 3851978 SRU_1566 Salinibacter ruber DSM 13855 ABC transporter permease YP_445687.1 1949954 D 309807 CDS YP_445688.1 83816847 3851158 complement(1950215..1950730) 1 NC_007677.1 hypothetical protein 1950730 3851158 SRU_1567 Salinibacter ruber DSM 13855 hypothetical protein YP_445688.1 1950215 R 309807 CDS YP_445689.1 83814613 3851465 1950792..1951331 1 NC_007677.1 identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase 1951331 3851465 SRU_1568 Salinibacter ruber DSM 13855 2'-5' RNA ligase YP_445689.1 1950792 D 309807 CDS YP_445690.1 83814337 3851384 1951443..1952084 1 NC_007677.1 identified by match to protein family HMM PF03548; Outer membrane lipoprotein carrier protein LolA 1952084 3851384 SRU_1569 Salinibacter ruber DSM 13855 Outer membrane lipoprotein carrier protein LolA YP_445690.1 1951443 D 309807 CDS YP_445691.1 83815240 3851041 1952143..1953333 1 NC_007677.1 identified by match to protein family HMM TIGR00374; hypothetical protein 1953333 3851041 SRU_1570 Salinibacter ruber DSM 13855 hypothetical protein YP_445691.1 1952143 D 309807 CDS YP_445692.1 83815628 3850691 1953448..1954392 1 NC_007677.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01763; malate dehydrogenase 1954392 mdh 3850691 mdh Salinibacter ruber DSM 13855 malate dehydrogenase YP_445692.1 1953448 D 309807 CDS YP_445693.1 83816185 3851564 complement(1954435..1955409) 1 NC_007677.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1955409 3851564 SRU_1572 Salinibacter ruber DSM 13855 cation efflux family protein YP_445693.1 1954435 R 309807 CDS YP_445694.1 83814627 3851440 1955355..1956674 1 NC_007677.1 identified by match to protein family HMM PF00561; match to protein family HMM PF00903; glyoxalase family protein 1956674 3851440 SRU_1573 Salinibacter ruber DSM 13855 glyoxalase family protein YP_445694.1 1955355 D 309807 CDS YP_445695.1 83815634 3850697 1956716..1957717 1 NC_007677.1 identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase 1957717 3850697 SRU_1574 Salinibacter ruber DSM 13855 aldo/keto reductase family oxidoreductase YP_445695.1 1956716 D 309807 CDS YP_445696.1 83815902 3851592 1957677..1958258 1 NC_007677.1 hypothetical protein 1958258 3851592 SRU_1575 Salinibacter ruber DSM 13855 hypothetical protein YP_445696.1 1957677 D 309807 CDS YP_445697.1 83814484 3851803 1958446..1959138 1 NC_007677.1 identified by similarity to SP:Q93P63; match to protein family HMM PF01625; match to protein family HMM TIGR00401; methionine-S-sulfoxide reductase 1959138 msrA 3851803 msrA Salinibacter ruber DSM 13855 methionine-S-sulfoxide reductase YP_445697.1 1958446 D 309807 CDS YP_445698.1 83815268 3851049 1959632..1961173 1 NC_007677.1 identified by match to protein family HMM PF03806; transporter 1961173 3851049 SRU_1577 Salinibacter ruber DSM 13855 transporter YP_445698.1 1959632 D 309807 CDS YP_445699.1 83816123 3850525 complement(1961188..1961610) 1 NC_007677.1 identified by match to protein family HMM PF01850; twitching mobility protein PilT 1961610 3850525 SRU_1578 Salinibacter ruber DSM 13855 twitching mobility protein PilT YP_445699.1 1961188 R 309807 CDS YP_445700.1 83816063 3853173 complement(1961617..1961877) 1 NC_007677.1 hypothetical protein 1961877 3853173 SRU_1579 Salinibacter ruber DSM 13855 hypothetical protein YP_445700.1 1961617 R 309807 CDS YP_445701.1 83816797 3851225 1962016..1963917 1 NC_007677.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1963917 uvrC 3851225 uvrC Salinibacter ruber DSM 13855 excinuclease ABC subunit C YP_445701.1 1962016 D 309807 CDS YP_445702.1 83814073 3852477 1964053..1964385 1 NC_007677.1 hypothetical protein 1964385 3852477 SRU_1581 Salinibacter ruber DSM 13855 hypothetical protein YP_445702.1 1964053 D 309807 CDS YP_445703.1 83815017 3852429 complement(1965323..1966141) 1 NC_007677.1 hypothetical protein 1966141 3852429 SRU_1582 Salinibacter ruber DSM 13855 hypothetical protein YP_445703.1 1965323 R 309807 CDS YP_445704.1 83814520 3852457 complement(1966158..1966394) 1 NC_007677.1 hypothetical protein 1966394 3852457 SRU_1583 Salinibacter ruber DSM 13855 hypothetical protein YP_445704.1 1966158 R 309807 CDS YP_445705.1 83815162 3850396 1966434..1969628 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1969628 3850396 SRU_1584 Salinibacter ruber DSM 13855 hypothetical protein YP_445705.1 1966434 D 309807 CDS YP_445706.1 83816034 3851686 1969685..1971412 1 NC_007677.1 hypothetical protein 1971412 3851686 SRU_1585 Salinibacter ruber DSM 13855 hypothetical protein YP_445706.1 1969685 D 309807 CDS YP_445707.1 83815219 3852300 1971844..1972602 1 NC_007677.1 hypothetical protein 1972602 3852300 SRU_1586 Salinibacter ruber DSM 13855 hypothetical protein YP_445707.1 1971844 D 309807 CDS YP_445708.1 83814527 3852602 1972678..1973370 1 NC_007677.1 identified by match to protein family HMM PF01618; biopolymer transport protein 1973370 3852602 SRU_1587 Salinibacter ruber DSM 13855 biopolymer transport protein YP_445708.1 1972678 D 309807 CDS YP_445709.1 83815842 3851648 1973418..1973825 1 NC_007677.1 identified by match to protein family HMM PF02472; ExbD/TolR family protein 1973825 3851648 SRU_1588 Salinibacter ruber DSM 13855 ExbD/TolR family protein YP_445709.1 1973418 D 309807 CDS YP_445710.1 83815095 3850505 complement(1974047..1975597) 1 NC_007677.1 identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein 1975597 3850505 SRU_1589 Salinibacter ruber DSM 13855 Mg chelatase-like protein YP_445710.1 1974047 R 309807 CDS YP_445711.1 83814285 3850354 complement(1976222..1976791) 1 NC_007677.1 identified by match to protein family HMM PF00127; match to protein family HMM TIGR01409; auracyanin A 1976791 3850354 SRU_1590 Salinibacter ruber DSM 13855 auracyanin A YP_445711.1 1976222 R 309807 CDS YP_445712.1 83816324 3851951 1977161..1977979 1 NC_007677.1 hypothetical protein 1977979 3851951 SRU_1591 Salinibacter ruber DSM 13855 hypothetical protein YP_445712.1 1977161 D 309807 CDS YP_445713.1 83814789 3850881 complement(1978218..1978979) 1 NC_007677.1 identified by match to protein family HMM PF01209; menaquinone biosynthesis methyltransferase ubiE 1978979 3850881 SRU_1592 Salinibacter ruber DSM 13855 menaquinone biosynthesis methyltransferase ubiE YP_445713.1 1978218 R 309807 CDS YP_445714.1 83814142 3850935 complement(1978995..1979687) 1 NC_007677.1 hypothetical protein 1979687 3850935 SRU_1593 Salinibacter ruber DSM 13855 hypothetical protein YP_445714.1 1978995 R 309807 CDS YP_445715.1 83814598 3851078 complement(1979647..1982268) 1 NC_007677.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; cation-transporting ATPase pacS 1982268 3851078 SRU_1594 Salinibacter ruber DSM 13855 cation-transporting ATPase pacS YP_445715.1 1979647 R 309807 CDS YP_445716.1 83816812 3851122 1982392..1982880 1 NC_007677.1 hypothetical protein 1982880 3851122 SRU_1595 Salinibacter ruber DSM 13855 hypothetical protein YP_445716.1 1982392 D 309807 CDS YP_445717.1 83815648 3850712 1983798..1984955 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD dependent oxidoreductase 1984955 3850712 SRU_1596 Salinibacter ruber DSM 13855 FAD dependent oxidoreductase YP_445717.1 1983798 D 309807 CDS YP_445718.1 83815217 3852298 complement(1985006..1985998) 1 NC_007677.1 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; SUA5 protein 1985998 3852298 SRU_1597 Salinibacter ruber DSM 13855 SUA5 protein YP_445718.1 1985006 R 309807 CDS YP_445719.1 83816224 3851837 1986077..1986541 1 NC_007677.1 identified by match to protein family HMM PF06803; hypothetical protein 1986541 3851837 SRU_1598 Salinibacter ruber DSM 13855 hypothetical protein YP_445719.1 1986077 D 309807 CDS YP_445720.1 83815677 3851014 complement(1987073..1988890) 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 1988890 3851014 SRU_1599 Salinibacter ruber DSM 13855 hypothetical protein YP_445720.1 1987073 R 309807 CDS YP_445721.1 83816032 3851684 1989045..1991042 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1991042 3851684 SRU_1600 Salinibacter ruber DSM 13855 hypothetical protein YP_445721.1 1989045 D 309807 CDS YP_445722.1 83814095 3850418 1991107..1991898 1 NC_007677.1 hypothetical protein 1991898 3850418 SRU_1601 Salinibacter ruber DSM 13855 hypothetical protein YP_445722.1 1991107 D 309807 CDS YP_445723.1 83816850 3852871 1991958..1993196 1 NC_007677.1 identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 1993196 3852871 SRU_1602 Salinibacter ruber DSM 13855 M23 peptidase domain-containing protein YP_445723.1 1991958 D 309807 CDS YP_445724.1 83816057 3853167 1993285..1994754 1 NC_007677.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoamide dehydrogenase 1994754 lpdA 3853167 lpdA Salinibacter ruber DSM 13855 dihydrolipoamide dehydrogenase YP_445724.1 1993285 D 309807 CDS YP_445725.1 83815279 3851061 complement(1995378..1997027) 1 NC_007677.1 identified by match to protein family HMM PF01433; aminopeptidase M1 family protein 1997027 3851061 SRU_1604 Salinibacter ruber DSM 13855 aminopeptidase M1 family protein YP_445725.1 1995378 R 309807 CDS YP_445726.1 83816025 3851677 complement(1997084..1997635) 1 NC_007677.1 identified by match to protein family HMM PF00226; DnaJ-like subfamily B protein 1997635 3851677 SRU_1605 Salinibacter ruber DSM 13855 DnaJ-like subfamily B protein YP_445726.1 1997084 R 309807 CDS YP_445727.1 83815782 3852165 complement(1997723..2000449) 1 NC_007677.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2000449 mutS 3852165 mutS Salinibacter ruber DSM 13855 DNA mismatch repair protein MutS YP_445727.1 1997723 R 309807 CDS YP_445728.1 83814433 3850719 complement(2000664..2001965) 1 NC_007677.1 identified by match to protein family HMM PF00226; DnaJ domain-containing protein 2001965 3850719 SRU_1607 Salinibacter ruber DSM 13855 DnaJ domain-containing protein YP_445728.1 2000664 R 309807 CDS YP_445729.1 83816401 3851741 complement(2001952..2002641) 1 NC_007677.1 hypothetical protein 2002641 3851741 SRU_1608 Salinibacter ruber DSM 13855 hypothetical protein YP_445729.1 2001952 R 309807 CDS YP_445730.1 83816009 3851661 2003019..2003810 1 NC_007677.1 identified by match to protein family HMM PF01513; ATP-NAD kinase 2003810 3851661 SRU_1609 Salinibacter ruber DSM 13855 ATP-NAD kinase YP_445730.1 2003019 D 309807 CDS YP_445731.2 161986635 3852985 2004285..2005691 1 NC_007677.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2005691 fumC 3852985 fumC Salinibacter ruber DSM 13855 fumarate hydratase YP_445731.2 2004285 D 309807 CDS YP_445732.1 83814416 3853000 2006031..2007482 1 NC_007677.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease 2007482 htrA 3853000 htrA Salinibacter ruber DSM 13855 serine protease YP_445732.1 2006031 D 309807 CDS YP_445733.1 83816694 3852695 2007546..2007836 1 NC_007677.1 hypothetical protein 2007836 3852695 SRU_1613 Salinibacter ruber DSM 13855 hypothetical protein YP_445733.1 2007546 D 309807 CDS YP_445734.1 83815869 3852527 2008079..2009173 1 NC_007677.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2009173 gldA 3852527 gldA Salinibacter ruber DSM 13855 glycerol dehydrogenase YP_445734.1 2008079 D 309807 CDS YP_445735.1 83816404 3851744 complement(2009433..2009975) 1 NC_007677.1 hypothetical protein 2009975 3851744 SRU_1615 Salinibacter ruber DSM 13855 hypothetical protein YP_445735.1 2009433 R 309807 CDS YP_445736.1 83814541 3852616 2010058..2011203 1 NC_007677.1 identified by match to protein family HMM PF01842; match to protein family HMM PF02153; match to protein family HMM PF03807; prephenate dehydrogenase 2011203 tyrA 3852616 tyrA Salinibacter ruber DSM 13855 prephenate dehydrogenase YP_445736.1 2010058 D 309807 CDS YP_445737.1 83815405 3852980 2011330..2012454 1 NC_007677.1 identified by match to protein family HMM PF01571; match to protein family HMM TIGR00528; glycine cleavage system T protein 2012454 gcvT 3852980 gcvT Salinibacter ruber DSM 13855 glycine cleavage system T protein YP_445737.1 2011330 D 309807 CDS YP_445738.1 83816073 3853183 2012526..2013245 1 NC_007677.1 identified by match to protein family HMM PF04029; hypothetical protein 2013245 3853183 SRU_1618 Salinibacter ruber DSM 13855 hypothetical protein YP_445738.1 2012526 D 309807 CDS YP_445739.1 83815631 3850694 2013502..2016165 1 NC_007677.1 identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 2016165 ftsK 3850694 ftsK Salinibacter ruber DSM 13855 ftsk/SpoIIIE family protein YP_445739.1 2013502 D 309807 CDS YP_445740.1 83816249 3852912 2016238..2017377 1 NC_007677.1 identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 2017377 purK 3852912 purK Salinibacter ruber DSM 13855 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_445740.1 2016238 D 309807 CDS YP_445741.1 83814364 3851352 2017516..2018028 1 NC_007677.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 2018028 purE 3851352 purE Salinibacter ruber DSM 13855 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_445741.1 2017516 D 309807 CDS YP_445742.1 83815249 3853017 2018100..2020133 1 NC_007677.1 identified by match to protein family HMM PF00041; lysyl endopeptidase 2020133 3853017 SRU_1622 Salinibacter ruber DSM 13855 lysyl endopeptidase YP_445742.1 2018100 D 309807 CDS YP_445743.1 83815043 3852632 complement(2020196..2021434) 1 NC_007677.1 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase 2021434 tyrS 3852632 tyrS Salinibacter ruber DSM 13855 tyrosyl-tRNA synthetase YP_445743.1 2020196 R 309807 CDS YP_445744.1 83815449 3850746 complement(2021495..2021959) 1 NC_007677.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2021959 smpB 3850746 smpB Salinibacter ruber DSM 13855 SsrA-binding protein YP_445744.1 2021495 R 309807 CDS YP_445745.1 83814431 3850717 complement(2022129..2022944) 1 NC_007677.1 hypothetical protein 2022944 3850717 SRU_1625 Salinibacter ruber DSM 13855 hypothetical protein YP_445745.1 2022129 R 309807 CDS YP_445746.1 83815701 3850608 complement(2023011..2023367) 1 NC_007677.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2023367 rplS 3850608 rplS Salinibacter ruber DSM 13855 50S ribosomal protein L19 YP_445746.1 2023011 R 309807 CDS YP_445747.1 83814140 3850933 complement(2023429..2024154) 1 NC_007677.1 identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1)-methyltransferase 2024154 trmD 3850933 trmD Salinibacter ruber DSM 13855 tRNA (guanine-N1)-methyltransferase YP_445747.1 2023429 R 309807 CDS YP_445748.1 83814853 3852790 complement(2024200..2024796) 1 NC_007677.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 2024796 rimM 3852790 rimM Salinibacter ruber DSM 13855 16S rRNA processing protein RimM YP_445748.1 2024200 R 309807 CDS YP_445749.1 83816028 3851680 complement(2024826..2025443) 1 NC_007677.1 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 2025443 rpsP 3851680 rpsP Salinibacter ruber DSM 13855 30S ribosomal protein S16 YP_445749.1 2024826 R 309807 CDS YP_445750.1 83814688 3853096 complement(2025515..2026900) 1 NC_007677.1 identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 2026900 ffh 3853096 ffh Salinibacter ruber DSM 13855 signal recognition particle protein YP_445750.1 2025515 R 309807 CDS YP_445751.1 83815655 3850992 2027252..2027839 1 NC_007677.1 identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 2027839 3850992 SRU_1631 Salinibacter ruber DSM 13855 5-formyltetrahydrofolate cyclo-ligase YP_445751.1 2027252 D 309807 CDS YP_445752.1 83815908 3851598 2027883..2028554 1 NC_007677.1 identified by match to protein family HMM PF04024; PspC domain-containing protein 2028554 3851598 SRU_1632 Salinibacter ruber DSM 13855 PspC domain-containing protein YP_445752.1 2027883 D 309807 CDS YP_445753.1 83815300 3850966 complement(2028566..2029747) 1 NC_007677.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein 2029747 3850966 SRU_1633 Salinibacter ruber DSM 13855 peptidase M16 inactive domain-containing protein YP_445753.1 2028566 R 309807 CDS YP_445754.1 83815938 3850436 complement(2029968..2031398) 1 NC_007677.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; protease 2031398 3850436 SRU_1634 Salinibacter ruber DSM 13855 protease YP_445754.1 2029968 R 309807 CDS YP_445755.1 83814085 3850408 complement(2031404..2034184) 1 NC_007677.1 identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA polymerase I 2034184 polA 3850408 polA Salinibacter ruber DSM 13855 DNA polymerase I YP_445755.1 2031404 R 309807 CDS YP_445756.1 83814682 3853090 2034444..2035121 1 NC_007677.1 identified by match to protein family HMM PF00702; HAD superfamily hydrolase 2035121 3853090 SRU_1636 Salinibacter ruber DSM 13855 HAD superfamily hydrolase YP_445756.1 2034444 D 309807 CDS YP_445757.1 83815808 3851614 complement(2035196..2037910) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; PAS domain-containing protein 2037910 3851614 SRU_1637 Salinibacter ruber DSM 13855 PAS domain-containing protein YP_445757.1 2035196 R 309807 CDS YP_445758.1 83816440 3852807 2038685..2039338 1 NC_007677.1 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 2039338 purN 3852807 purN Salinibacter ruber DSM 13855 phosphoribosylglycinamide formyltransferase YP_445758.1 2038685 D 309807 CDS YP_445759.1 83814540 3852615 2039358..2040944 1 NC_007677.1 identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355; bifunctional purine biosynthesis protein PurH 2040944 purH 3852615 purH Salinibacter ruber DSM 13855 bifunctional purine biosynthesis protein PurH YP_445759.1 2039358 D 309807 CDS YP_445760.1 83815318 3852147 2041111..2042118 1 NC_007677.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2042118 3852147 SRU_1640 Salinibacter ruber DSM 13855 rod shape-determining protein MreB YP_445760.1 2041111 D 309807 CDS YP_445761.1 83815737 3852745 2042243..2042995 1 NC_007677.1 identified by match to protein family HMM PF04085; cell shape-determining protein MreC 2042995 3852745 SRU_1641 Salinibacter ruber DSM 13855 cell shape-determining protein MreC YP_445761.1 2042243 D 309807 CDS YP_445762.1 83816553 3851897 2043142..2043783 1 NC_007677.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2043783 3851897 SRU_1642 Salinibacter ruber DSM 13855 ATP-dependent protease peptidase subunit YP_445762.1 2043142 D 309807 CDS YP_445763.1 83815599 3850780 2043890..2044999 1 NC_007677.1 hypothetical protein 2044999 3850780 SRU_1643 Salinibacter ruber DSM 13855 hypothetical protein YP_445763.1 2043890 D 309807 CDS YP_445764.1 83816415 3851755 2045059..2046504 1 NC_007677.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2046504 hslU 3851755 hslU Salinibacter ruber DSM 13855 ATP-dependent protease ATP-binding subunit HslU YP_445764.1 2045059 D 309807 CDS YP_445765.1 83816246 3852909 2046526..2046891 1 NC_007677.1 phosphoribosylaminoimidazole carboxylase ATPase subunit 2046891 3852909 SRU_1645 Salinibacter ruber DSM 13855 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_445765.1 2046526 D 309807 CDS YP_445766.1 83814206 3850647 complement(2046927..2047829) 1 NC_007677.1 hypothetical protein 2047829 3850647 SRU_1646 Salinibacter ruber DSM 13855 hypothetical protein YP_445766.1 2046927 R 309807 CDS YP_445767.1 83815349 3853196 complement(2047881..2048537) 1 NC_007677.1 identified by match to protein family HMM PF00132; carbonic anhydrase 2048537 paaY 3853196 paaY Salinibacter ruber DSM 13855 carbonic anhydrase YP_445767.1 2047881 R 309807 CDS YP_445768.1 83815970 3852707 2048509..2049567 1 NC_007677.1 identified by match to protein family HMM PF01594; hypothetical protein 2049567 3852707 SRU_1648 Salinibacter ruber DSM 13855 hypothetical protein YP_445768.1 2048509 D 309807 CDS YP_445769.1 83815860 3852518 complement(2049795..2050766) 1 NC_007677.1 identified by match to protein family HMM PF00597; DedA family protein 2050766 3852518 SRU_1650 Salinibacter ruber DSM 13855 DedA family protein YP_445769.1 2049795 R 309807 CDS YP_445770.1 83814369 3851240 complement(2050493..2050966) 1 NC_007677.1 identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 2050966 ispF 3851240 ispF Salinibacter ruber DSM 13855 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_445770.1 2050493 R 309807 CDS YP_445771.1 83814958 3851264 complement(2050995..2051711) 1 NC_007677.1 identified by match to protein family HMM PF01128; hypothetical protein 2051711 3851264 SRU_1652 Salinibacter ruber DSM 13855 hypothetical protein YP_445771.1 2050995 R 309807 CDS YP_445772.1 83815574 3850755 complement(2051801..2052850) 1 NC_007677.1 identified by match to protein family HMM PF02547; queuosine biosynthesis protein 2052850 3850755 SRU_1653 Salinibacter ruber DSM 13855 queuosine biosynthesis protein YP_445772.1 2051801 R 309807 CDS YP_445773.1 83816184 3851563 complement(2053016..2053972) 1 NC_007677.1 hypothetical protein 2053972 3851563 SRU_1654 Salinibacter ruber DSM 13855 hypothetical protein YP_445773.1 2053016 R 309807 CDS YP_445774.1 83816770 3852577 complement(2054038..2055828) 1 NC_007677.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR01409; glutamyl-tRNA(Gln) amidotransferase subunit A 2055828 3852577 SRU_1655 Salinibacter ruber DSM 13855 glutamyl-tRNA(Gln) amidotransferase subunit A YP_445774.1 2054038 R 309807 CDS YP_445775.1 83814093 3850416 complement(2056324..2056926) 1 NC_007677.1 hypothetical protein 2056926 3850416 SRU_1656 Salinibacter ruber DSM 13855 hypothetical protein YP_445775.1 2056324 R 309807 CDS YP_445776.1 83816497 3852866 complement(2056975..2058228) 1 NC_007677.1 identified by match to protein family HMM PF01384; anion permease 2058228 ylnA 3852866 ylnA Salinibacter ruber DSM 13855 anion permease YP_445776.1 2056975 R 309807 CDS YP_445777.1 83815711 3850618 complement(2058480..2060081) 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 2060081 prfC 3850618 prfC Salinibacter ruber DSM 13855 peptide chain release factor 3 YP_445777.1 2058480 R 309807 CDS YP_445778.1 83815226 3851027 complement(2060815..2062089) 1 NC_007677.1 hypothetical protein 2062089 3851027 SRU_1659 Salinibacter ruber DSM 13855 hypothetical protein YP_445778.1 2060815 R 309807 CDS YP_445779.1 83814701 3851494 complement(2062143..2062988) 1 NC_007677.1 identified by match to protein family HMM PF02698; hypothetical protein 2062988 3851494 SRU_1660 Salinibacter ruber DSM 13855 hypothetical protein YP_445779.1 2062143 R 309807 CDS YP_445780.1 83814846 3852783 complement(2063371..2064609) 1 NC_007677.1 identified by match to protein family HMM PF01323; match to protein family HMM PF07884; vitamin K epoxide reductase family protein 2064609 3852783 SRU_1661 Salinibacter ruber DSM 13855 vitamin K epoxide reductase family protein YP_445780.1 2063371 R 309807 CDS YP_445781.1 83814118 3851105 2064907..2066478 1 NC_007677.1 identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564; anthranilate synthase component I 2066478 trpE 3851105 trpE Salinibacter ruber DSM 13855 anthranilate synthase component I YP_445781.1 2064907 D 309807 CDS YP_445782.1 83814941 3851324 2066587..2067066 1 NC_007677.1 hypothetical protein 2067066 3851324 SRU_1663 Salinibacter ruber DSM 13855 hypothetical protein YP_445782.1 2066587 D 309807 CDS YP_445783.1 83814349 3851337 2067116..2068150 1 NC_007677.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2068150 trpS 3851337 trpS Salinibacter ruber DSM 13855 tryptophanyl-tRNA synthetase YP_445783.1 2067116 D 309807 CDS YP_445784.1 83816369 3851865 2068274..2068876 1 NC_007677.1 identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II 2068876 3851865 SRU_1665 Salinibacter ruber DSM 13855 para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II YP_445784.1 2068274 D 309807 CDS YP_445785.1 83814848 3852785 2068922..2069956 1 NC_007677.1 identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR01245; anthranilate phosphoribosyltransferase 2069956 trpD 3852785 trpD Salinibacter ruber DSM 13855 anthranilate phosphoribosyltransferase YP_445785.1 2068922 D 309807 CDS YP_445786.1 83814749 3851367 2070017..2070829 1 NC_007677.1 identified by match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 2070829 trpC 3851367 trpC Salinibacter ruber DSM 13855 indole-3-glycerol phosphate synthase YP_445786.1 2070017 D 309807 CDS YP_445787.1 83816293 3852055 2070900..2071565 1 NC_007677.1 identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 2071565 trpF 3852055 trpF Salinibacter ruber DSM 13855 N-(5'phosphoribosyl)anthranilate isomerase YP_445787.1 2070900 D 309807 CDS YP_445788.1 83815946 3850444 2071644..2072864 1 NC_007677.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2072864 trpB 3850444 trpB Salinibacter ruber DSM 13855 tryptophan synthase subunit beta YP_445788.1 2071644 D 309807 CDS YP_445789.1 83815134 3852941 2072917..2073753 1 NC_007677.1 identified by match to protein family HMM PF00290; match to protein family HMM TIGR00262; tryptophan synthase subunit alpha 2073753 trpA 3852941 trpA Salinibacter ruber DSM 13855 tryptophan synthase subunit alpha YP_445789.1 2072917 D 309807 CDS YP_445790.1 83815026 3852438 2073878..2075026 1 NC_007677.1 hypothetical protein 2075026 3852438 SRU_1671 Salinibacter ruber DSM 13855 hypothetical protein YP_445790.1 2073878 D 309807 CDS YP_445791.1 83815225 3851026 2075026..2075451 1 NC_007677.1 hypothetical protein 2075451 3851026 SRU_1672 Salinibacter ruber DSM 13855 hypothetical protein YP_445791.1 2075026 D 309807 CDS YP_445792.1 83814418 3853002 complement(2075466..2077415) 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 2077415 3853002 SRU_1673 Salinibacter ruber DSM 13855 ATP-dependent DNA helicase RecQ YP_445792.1 2075466 R 309807 CDS YP_445793.1 83815686 3851023 2077395..2078570 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 2078570 3851023 SRU_1675 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_445793.1 2077395 D 309807 CDS YP_445794.1 83816234 3852897 complement(2078538..2079482) 1 NC_007677.1 identified by match to protein family HMM PF00892; hypothetical protein 2079482 3852897 SRU_1674 Salinibacter ruber DSM 13855 hypothetical protein YP_445794.1 2078538 R 309807 CDS YP_445795.1 83815353 3853200 complement(2079507..2079932) 1 NC_007677.1 hypothetical protein 2079932 3853200 SRU_1676 Salinibacter ruber DSM 13855 hypothetical protein YP_445795.1 2079507 R 309807 CDS YP_445796.1 83814721 3851475 complement(2079955..2080977) 1 NC_007677.1 identified by match to protein family HMM PF00180; (NAD+) isocitrate dehydrogenase 2080977 3851475 SRU_1677 Salinibacter ruber DSM 13855 (NAD+) isocitrate dehydrogenase YP_445796.1 2079955 R 309807 CDS YP_445797.1 83814302 3851094 complement(2081129..2081590) 1 NC_007677.1 hypothetical protein 2081590 3851094 SRU_1678 Salinibacter ruber DSM 13855 hypothetical protein YP_445797.1 2081129 R 309807 CDS YP_445798.1 83816347 3851974 complement(2081655..2082263) 1 NC_007677.1 hypothetical protein 2082263 3851974 SRU_1679 Salinibacter ruber DSM 13855 hypothetical protein YP_445798.1 2081655 R 309807 CDS YP_445799.1 83815969 3852706 complement(2082318..2082599) 1 NC_007677.1 hypothetical protein 2082599 3852706 SRU_1680 Salinibacter ruber DSM 13855 hypothetical protein YP_445799.1 2082318 R 309807 CDS YP_445800.1 83814961 3851267 complement(2082702..2083430) 1 NC_007677.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2083430 3851267 SRU_1681 Salinibacter ruber DSM 13855 MotA/TolQ/ExbB proton channel family protein YP_445800.1 2082702 R 309807 CDS YP_445801.1 83815721 3850628 2083984..2085714 1 NC_007677.1 identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 2085714 3850628 SRU_1682 Salinibacter ruber DSM 13855 phosphotransferase domain-containing protein YP_445801.1 2083984 D 309807 CDS YP_445802.1 83815990 3852727 2085753..2087720 1 NC_007677.1 penicillin amidase superfamily protein 2087720 3852727 SRU_1683 Salinibacter ruber DSM 13855 penicillin amidase superfamily protein YP_445802.1 2085753 D 309807 CDS YP_445803.1 83815833 3851639 complement(2087745..2089736) 1 NC_007677.1 identified by match to protein family HMM PF00501; acetyl-CoA synthase 2089736 acs 3851639 acs Salinibacter ruber DSM 13855 acetyl-CoA synthase YP_445803.1 2087745 R 309807 CDS YP_445804.1 83816653 3852107 complement(2089860..2091707) 1 NC_007677.1 identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553; chorismate binding protein 2091707 3852107 SRU_1685 Salinibacter ruber DSM 13855 chorismate binding protein YP_445804.1 2089860 R 309807 CDS YP_445805.1 83814602 3851082 complement(2091846..2092868) 1 NC_007677.1 identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase family protein 2092868 3851082 SRU_1686 Salinibacter ruber DSM 13855 oxidoreductase, zinc-binding dehydrogenase family protein YP_445805.1 2091846 R 309807 CDS YP_445806.1 83815286 3850952 2093158..2094309 1 NC_007677.1 identified by match to protein family HMM PF00724; oxidoreductase, FMN-binding 2094309 3850952 SRU_1687 Salinibacter ruber DSM 13855 oxidoreductase, FMN-binding YP_445806.1 2093158 D 309807 CDS YP_445807.1 83815413 3852988 2094354..2095127 1 NC_007677.1 identified by match to protein family HMM PF02678; hypothetical protein 2095127 3852988 SRU_1688 Salinibacter ruber DSM 13855 hypothetical protein YP_445807.1 2094354 D 309807 CDS YP_445808.1 83815511 3852321 complement(2095527..2098835) 1 NC_007677.1 identified by match to protein family HMM PF01642; match to protein family HMM PF03308; methylmalonyll-CoA mutase 2098835 3852321 SRU_1689 Salinibacter ruber DSM 13855 methylmalonyll-CoA mutase YP_445808.1 2095527 R 309807 CDS YP_445809.1 83816413 3851753 2099074..2100138 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase family protein 2100138 3851753 SRU_1690 Salinibacter ruber DSM 13855 3-beta hydroxysteroid dehydrogenase/isomerase family protein YP_445809.1 2099074 D 309807 CDS YP_445810.1 83814180 3850857 complement(2100194..2100721) 1 NC_007677.1 identified by match to protein family HMM PF01899; Na(+)/H(+) ion antiporter subunit family protein 2100721 3850857 SRU_1691 Salinibacter ruber DSM 13855 Na(+)/H(+) ion antiporter subunit family protein YP_445810.1 2100194 R 309807 CDS YP_445811.1 83815877 3852535 complement(2100648..2102216) 1 NC_007677.1 identified by match to protein family HMM PF00361; NADH-ubiquinone/plastoquinone complex I protein 2102216 3852535 SRU_1692 Salinibacter ruber DSM 13855 NADH-ubiquinone/plastoquinone complex I protein YP_445811.1 2100648 R 309807 CDS YP_445812.1 83815429 3852278 complement(2102260..2102616) 1 NC_007677.1 identified by match to protein family HMM PF00420; cation transport system protein 2102616 3852278 SRU_1693 Salinibacter ruber DSM 13855 cation transport system protein YP_445812.1 2102260 R 309807 CDS YP_445813.1 83814534 3852609 complement(2102662..2103096) 1 NC_007677.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 2103096 3852609 SRU_1694 Salinibacter ruber DSM 13855 monovalent cation/H+ antiporter subunit B YP_445813.1 2102662 R 309807 CDS YP_445814.1 83816417 3851757 complement(2103093..2105477) 1 NC_007677.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 2105477 3851757 SRU_1695 Salinibacter ruber DSM 13855 monovalent cation/H+ antiporter subunit A YP_445814.1 2103093 R 309807 CDS YP_445815.1 83814996 3853035 complement(2105543..2105947) 1 NC_007677.1 identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300; MnhG/PhaG subunit subfamily monovalent cation/proton antiporter 2105947 3853035 SRU_1696 Salinibacter ruber DSM 13855 MnhG/PhaG subunit subfamily monovalent cation/proton antiporter YP_445815.1 2105543 R 309807 CDS YP_445816.1 83816686 3852687 complement(2105990..2106301) 1 NC_007677.1 identified by match to protein family HMM PF04066; pH adaptation potassium efflux system phaF 2106301 3852687 SRU_1697 Salinibacter ruber DSM 13855 pH adaptation potassium efflux system phaF YP_445816.1 2105990 R 309807 CDS YP_445817.1 83816717 3850834 2106513..2106875 1 NC_007677.1 hypothetical protein 2106875 3850834 SRU_1698 Salinibacter ruber DSM 13855 hypothetical protein YP_445817.1 2106513 D 309807 CDS YP_445818.1 83816119 3850521 2106958..2107518 1 NC_007677.1 hypothetical protein 2107518 3850521 SRU_1699 Salinibacter ruber DSM 13855 hypothetical protein YP_445818.1 2106958 D 309807 CDS YP_445819.1 83814663 3852248 2107578..2107925 1 NC_007677.1 hypothetical protein 2107925 3852248 SRU_1700 Salinibacter ruber DSM 13855 hypothetical protein YP_445819.1 2107578 D 309807 CDS YP_445820.1 83816544 3851887 complement(2108315..2110675) 1 NC_007677.1 identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770; acyl-coenzyme A oxidase I 2110675 3851887 SRU_1701 Salinibacter ruber DSM 13855 acyl-coenzyme A oxidase I YP_445820.1 2108315 R 309807 CDS YP_445821.1 83815293 3850959 complement(2110687..2111751) 1 NC_007677.1 identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase 2111751 hemE 3850959 hemE Salinibacter ruber DSM 13855 uroporphyrinogen decarboxylase YP_445821.1 2110687 R 309807 CDS YP_445822.1 83814742 3851360 complement(2111842..2112855) 1 NC_007677.1 identified by match to protein family HMM PF01738; dienelactone hydrolase family protein 2112855 3851360 SRU_1703 Salinibacter ruber DSM 13855 dienelactone hydrolase family protein YP_445822.1 2111842 R 309807 CDS YP_445823.1 83815807 3851613 2112914..2113567 1 NC_007677.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 2113567 cdsA 3851613 cdsA Salinibacter ruber DSM 13855 phosphatidate cytidylyltransferase YP_445823.1 2112914 D 309807 CDS YP_445824.1 83814812 3852417 2113509..2114519 1 NC_007677.1 lipase 2114519 3852417 SRU_1705 Salinibacter ruber DSM 13855 lipase YP_445824.1 2113509 D 309807 CDS YP_445825.1 83816529 3852003 2114594..2115907 1 NC_007677.1 identified by match to protein family HMM PF01966; HD domain-containing protein 2115907 3852003 SRU_1706 Salinibacter ruber DSM 13855 HD domain-containing protein YP_445825.1 2114594 D 309807 CDS YP_445826.1 83815907 3851597 2116164..2116718 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; ECF-subfamily sigma factor 2116718 3851597 SRU_1707 Salinibacter ruber DSM 13855 ECF-subfamily sigma factor YP_445826.1 2116164 D 309807 CDS YP_445827.1 83816137 3850539 2116819..2118234 1 NC_007677.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 2118234 tnaA 3850539 tnaA Salinibacter ruber DSM 13855 tryptophanase YP_445827.1 2116819 D 309807 CDS YP_445828.1 83815439 3850736 complement(2118242..2119330) 1 NC_007677.1 identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519; L-asparaginase 2119330 ansA 3850736 ansA Salinibacter ruber DSM 13855 L-asparaginase YP_445828.1 2118242 R 309807 CDS YP_445829.1 83814654 3851428 complement(2119475..2120074) 1 NC_007677.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 2120074 hpt 3851428 hpt Salinibacter ruber DSM 13855 hypoxanthine phosphoribosyltransferase YP_445829.1 2119475 R 309807 CDS YP_445830.1 83816193 3851806 complement(2120137..2121543) 1 NC_007677.1 identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 2121543 tilS 3851806 tilS Salinibacter ruber DSM 13855 tRNA(Ile)-lysidine synthetase YP_445830.1 2120137 R 309807 CDS YP_445831.1 83814237 3852585 complement(2121575..2123518) 1 NC_007677.1 identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM TIGR00585; DNA mismatch repair protein MutL 2123518 mutL 3852585 mutL Salinibacter ruber DSM 13855 DNA mismatch repair protein MutL YP_445831.1 2121575 R 309807 CDS YP_445832.1 83816448 3852815 complement(2123583..2123783) 1 NC_007677.1 hypothetical protein 2123783 3852815 SRU_1713 Salinibacter ruber DSM 13855 hypothetical protein YP_445832.1 2123583 R 309807 CDS YP_445833.1 83816601 3853131 complement(2123939..2124757) 1 NC_007677.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 2124757 cdsA 3853131 cdsA Salinibacter ruber DSM 13855 phosphatidate cytidylyltransferase YP_445833.1 2123939 R 309807 CDS YP_445834.1 83815992 3852729 complement(2124805..2125200) 1 NC_007677.1 hypothetical protein 2125200 3852729 SRU_1715 Salinibacter ruber DSM 13855 hypothetical protein YP_445834.1 2124805 R 309807 CDS YP_445835.1 83816563 3851907 complement(2125216..2126124) 1 NC_007677.1 identified by match to protein family HMM PF02517; hypothetical protein 2126124 3851907 SRU_1716 Salinibacter ruber DSM 13855 hypothetical protein YP_445835.1 2125216 R 309807 CDS YP_445836.1 83815940 3850438 2126682..2127203 1 NC_007677.1 hypothetical protein 2127203 3850438 SRU_1718 Salinibacter ruber DSM 13855 hypothetical protein YP_445836.1 2126682 D 309807 CDS YP_445837.1 83815306 3852135 2127203..2128915 1 NC_007677.1 identified by match to protein family HMM PF02985; HEAT repeat-containing protein 2128915 3852135 SRU_1719 Salinibacter ruber DSM 13855 HEAT repeat-containing protein YP_445837.1 2127203 D 309807 CDS YP_445838.1 83814695 3853103 complement(2128956..2129720) 1 NC_007677.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 2129720 3853103 SRU_1720 Salinibacter ruber DSM 13855 SPFH domain-containing protein YP_445838.1 2128956 R 309807 CDS YP_445839.1 83816442 3852809 2129911..2131467 1 NC_007677.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; DNA damage-inducible protein 2131467 3852809 SRU_1721 Salinibacter ruber DSM 13855 DNA damage-inducible protein YP_445839.1 2129911 D 309807 CDS YP_445840.1 83816668 3852669 2131508..2131783 1 NC_007677.1 hypothetical protein 2131783 3852669 SRU_1722 Salinibacter ruber DSM 13855 hypothetical protein YP_445840.1 2131508 D 309807 CDS YP_445841.1 83815763 3852771 2131879..2132403 1 NC_007677.1 identified by match to protein family HMM PF01965; protease I 2132403 3852771 SRU_1723 Salinibacter ruber DSM 13855 protease I YP_445841.1 2131879 D 309807 CDS YP_445842.1 83816288 3852050 complement(2132546..2133163) 1 NC_007677.1 identified by match to protein family HMM PF00081; match to protein family HMM PF02777; Mn-superoxide dismutase 2133163 3852050 SRU_1724 Salinibacter ruber DSM 13855 Mn-superoxide dismutase YP_445842.1 2132546 R 309807 CDS YP_445843.1 83815622 3850685 complement(2133675..2134868) 1 NC_007677.1 identified by match to protein family HMM PF03435; saccharopine dehydrogenase 2134868 lys1 3850685 lys1 Salinibacter ruber DSM 13855 saccharopine dehydrogenase YP_445843.1 2133675 R 309807 CDS YP_445844.1 83816283 3852045 complement(2134771..2135829) 1 NC_007677.1 identified by match to protein family HMM PF00246; zinc carboxypeptidase superfamily protein 2135829 3852045 SRU_1726 Salinibacter ruber DSM 13855 zinc carboxypeptidase superfamily protein YP_445844.1 2134771 R 309807 CDS YP_445845.1 83814746 3851364 2136067..2136282 1 NC_007677.1 identified by match to protein family HMM PF00313; hypothetical protein 2136282 3851364 SRU_1727 Salinibacter ruber DSM 13855 hypothetical protein YP_445845.1 2136067 D 309807 CDS YP_445846.1 83815165 3850360 complement(2136356..2137681) 1 NC_007677.1 hypothetical protein 2137681 3850360 SRU_1728 Salinibacter ruber DSM 13855 hypothetical protein YP_445846.1 2136356 R 309807 CDS YP_445847.1 83815983 3852720 complement(2137662..2139842) 1 NC_007677.1 hypothetical protein 2139842 3852720 SRU_1729 Salinibacter ruber DSM 13855 hypothetical protein YP_445847.1 2137662 R 309807 CDS YP_445848.1 83815708 3850615 complement(2140038..2140997) 1 NC_007677.1 hypothetical protein 2140997 3850615 SRU_1730 Salinibacter ruber DSM 13855 hypothetical protein YP_445848.1 2140038 R 309807 CDS YP_445849.1 83816487 3852856 complement(2141213..2141404) 1 NC_007677.1 histone H1-like protein 2141404 3852856 SRU_1731 Salinibacter ruber DSM 13855 histone H1-like protein YP_445849.1 2141213 R 309807 CDS YP_445850.1 83814398 3851171 complement(2141554..2142297) 1 NC_007677.1 acetylglutamate kinase 2142297 argB 3851171 argB Salinibacter ruber DSM 13855 acetylglutamate kinase YP_445850.1 2141554 R 309807 CDS YP_445851.1 83815178 3850373 complement(2142550..2144757) 1 NC_007677.1 identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase 2144757 3850373 SRU_1733 Salinibacter ruber DSM 13855 acyl-CoA dehydrogenase YP_445851.1 2142550 R 309807 CDS YP_445852.1 83816641 3852095 2144833..2145828 1 NC_007677.1 identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase 2145828 pyrF 3852095 pyrF Salinibacter ruber DSM 13855 orotidine 5'-phosphate decarboxylase YP_445852.1 2144833 D 309807 CDS YP_445853.1 83814501 3851723 complement(2145797..2146183) 1 NC_007677.1 hypothetical protein 2146183 3851723 SRU_1734 Salinibacter ruber DSM 13855 hypothetical protein YP_445853.1 2145797 R 309807 CDS YP_445854.1 83816135 3850537 complement(2146212..2147141) 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 2147141 3850537 SRU_1736 Salinibacter ruber DSM 13855 universal stress protein YP_445854.1 2146212 R 309807 CDS YP_445855.1 83816755 3852562 complement(2147157..2148068) 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 2148068 3852562 SRU_1737 Salinibacter ruber DSM 13855 universal stress protein YP_445855.1 2147157 R 309807 CDS YP_445856.1 83816155 3851534 2148281..2148553 1 NC_007677.1 hypothetical protein 2148553 3851534 SRU_1738 Salinibacter ruber DSM 13855 hypothetical protein YP_445856.1 2148281 D 309807 CDS YP_445857.1 83814763 3851693 complement(2148671..2149768) 1 NC_007677.1 identified by match to protein family HMM PF07690; major facilitator superfamily transporter 2149768 3851693 SRU_1739 Salinibacter ruber DSM 13855 major facilitator superfamily transporter YP_445857.1 2148671 R 309807 CDS YP_445858.1 83814179 3850856 complement(2149984..2151324) 1 NC_007677.1 identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase 2151324 hemL 3850856 hemL Salinibacter ruber DSM 13855 glutamate-1-semialdehyde-2,1-aminomutase YP_445858.1 2149984 R 309807 CDS YP_445859.1 83816416 3851756 complement(2152010..2153353) 1 NC_007677.1 identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase 2153353 hemH 3851756 hemH Salinibacter ruber DSM 13855 ferrochelatase YP_445859.1 2152010 R 309807 CDS YP_445860.1 83816565 3851909 complement(2153483..2154406) 1 NC_007677.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2154406 hemF 3851909 hemF Salinibacter ruber DSM 13855 coproporphyrinogen III oxidase YP_445860.1 2153483 R 309807 CDS YP_445861.1 83814990 3851199 complement(2154564..2155262) 1 NC_007677.1 identified by match to protein family HMM PF00849; ribosomal large subunit pseudouridine synthase A 2155262 rluA 3851199 rluA Salinibacter ruber DSM 13855 ribosomal large subunit pseudouridine synthase A YP_445861.1 2154564 R 309807 CDS YP_445862.1 83815624 3850687 complement(2155315..2156343) 1 NC_007677.1 identified by match to protein family HMM PF01113; match to protein family HMM PF02629; oxidoreductase 2156343 3850687 SRU_1744 Salinibacter ruber DSM 13855 oxidoreductase YP_445862.1 2155315 R 309807 CDS YP_445863.1 83814919 3850971 complement(2156419..2157351) 1 NC_007677.1 identified by match to protein family HMM PF00696; aspartate kinase 2157351 lysC 3850971 lysC Salinibacter ruber DSM 13855 aspartate kinase YP_445863.1 2156419 R 309807 CDS YP_445864.1 83815795 3852178 2157409..2158578 1 NC_007677.1 identified by match to protein family HMM PF07670; spore maturation protein A 2158578 3852178 SRU_1746 Salinibacter ruber DSM 13855 spore maturation protein A YP_445864.1 2157409 D 309807 CDS YP_445865.1 83816842 3851153 2158628..2159173 1 NC_007677.1 identified by match to protein family HMM PF07670; hypothetical protein 2159173 3851153 SRU_1747 Salinibacter ruber DSM 13855 hypothetical protein YP_445865.1 2158628 D 309807 CDS YP_445866.1 83814192 3850869 complement(2159220..2160716) 1 NC_007677.1 identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2160716 dacB 3850869 dacB Salinibacter ruber DSM 13855 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_445866.1 2159220 R 309807 CDS YP_445867.1 83815121 3852652 complement(2160817..2162334) 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein 2162334 3852652 SRU_1749 Salinibacter ruber DSM 13855 hypothetical protein YP_445867.1 2160817 R 309807 CDS YP_445868.1 83816108 3850588 complement(2162543..2163271) 1 NC_007677.1 hypothetical protein 2163271 3850588 SRU_1750 Salinibacter ruber DSM 13855 hypothetical protein YP_445868.1 2162543 R 309807 CDS YP_445869.1 83815770 3852153 2163291..2163524 1 NC_007677.1 hypothetical protein 2163524 3852153 SRU_1751 Salinibacter ruber DSM 13855 hypothetical protein YP_445869.1 2163291 D 309807 CDS YP_445870.1 83816424 3851764 2163608..2164120 1 NC_007677.1 hypothetical protein 2164120 3851764 SRU_1752 Salinibacter ruber DSM 13855 hypothetical protein YP_445870.1 2163608 D 309807 CDS YP_445871.1 83814757 3851375 complement(2164143..2164364) 1 NC_007677.1 hypothetical protein 2164364 3851375 SRU_1753 Salinibacter ruber DSM 13855 hypothetical protein YP_445871.1 2164143 R 309807 CDS YP_445872.1 83816766 3852573 complement(2164382..2165770) 1 NC_007677.1 identified by similarity to SP:P12769; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 2165770 phrB 3852573 phrB Salinibacter ruber DSM 13855 deoxyribodipyrimidine photolyase YP_445872.1 2164382 R 309807 CDS YP_445873.1 83816120 3850522 complement(2165880..2167232) 1 NC_007677.1 identified by match to protein family HMM PF00375; proton/glutamate symporter 2167232 gltP 3850522 gltP Salinibacter ruber DSM 13855 proton/glutamate symporter YP_445873.1 2165880 R 309807 CDS YP_445874.1 83814776 3851706 complement(2167392..2168879) 1 NC_007677.1 identified by match to protein family HMM PF01940; hypothetical protein 2168879 3851706 SRU_1756 Salinibacter ruber DSM 13855 hypothetical protein YP_445874.1 2167392 R 309807 CDS YP_445875.1 83814133 3851120 complement(2168989..2173335) 1 NC_007677.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 2173335 rpoC 3851120 rpoC Salinibacter ruber DSM 13855 DNA-directed RNA polymerase subunit beta' YP_445875.1 2168989 R 309807 CDS YP_445876.1 83816372 3851868 complement(2173447..2177454) 1 NC_007677.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 2177454 rpoB 3851868 rpoB Salinibacter ruber DSM 13855 DNA-directed RNA polymerase subunit beta YP_445876.1 2173447 R 309807 CDS YP_445877.1 83815730 3852738 complement(2177890..2178273) 1 NC_007677.1 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 2178273 rplL 3852738 rplL Salinibacter ruber DSM 13855 50S ribosomal protein L7/L12 YP_445877.1 2177890 R 309807 CDS YP_445878.1 83814413 3852997 complement(2178412..2178948) 1 NC_007677.1 identified by match to protein family HMM PF00466; 50S ribosomal protein L10 2178948 rplJ 3852997 rplJ Salinibacter ruber DSM 13855 50S ribosomal protein L10 YP_445878.1 2178412 R 309807 CDS YP_445879.1 83816790 3851218 complement(2179000..2179713) 1 NC_007677.1 identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 2179713 rplA 3851218 rplA Salinibacter ruber DSM 13855 50S ribosomal protein L1 YP_445879.1 2179000 R 309807 CDS YP_445880.1 83816068 3853178 complement(2179834..2180430) 1 NC_007677.1 identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 2180430 3853178 SRU_1762 Salinibacter ruber DSM 13855 50S ribosomal protein L11 YP_445880.1 2179834 R 309807 CDS YP_445881.1 83815555 3852228 complement(2180393..2180950) 1 NC_007677.1 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 2180950 nusG 3852228 nusG Salinibacter ruber DSM 13855 transcription termination/antitermination factor NusG YP_445881.1 2180393 R 309807 CDS YP_445882.1 83814677 3852262 complement(2181000..2181302) 1 NC_007677.1 identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE 2181302 3852262 SRU_1764 Salinibacter ruber DSM 13855 Preprotein translocase subunit SecE YP_445882.1 2181000 R 309807 CDS YP_445883.1 83814658 3851432 complement(2181463..2182653) 1 NC_007677.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2182653 tuf 3851432 tuf Salinibacter ruber DSM 13855 elongation factor Tu YP_445883.1 2181463 R 309807 CDS YP_445884.1 83815489 3853083 2182969..2184885 1 NC_007677.1 sodium-dependent transporter 2184885 3853083 SRU_1767 Salinibacter ruber DSM 13855 sodium-dependent transporter YP_445884.1 2182969 D 309807 CDS YP_445885.1 83814877 3851299 2185057..2185368 1 NC_007677.1 hypothetical protein 2185368 3851299 SRU_1768 Salinibacter ruber DSM 13855 hypothetical protein YP_445885.1 2185057 D 309807 CDS YP_445886.1 83814382 3851253 complement(2185493..2185735) 1 NC_007677.1 hypothetical protein 2185735 3851253 SRU_1769 Salinibacter ruber DSM 13855 hypothetical protein YP_445886.1 2185493 R 309807 CDS YP_445887.1 83815975 3852712 2185767..2187983 1 NC_007677.1 hypothetical protein 2187983 3852712 SRU_1771 Salinibacter ruber DSM 13855 hypothetical protein YP_445887.1 2185767 D 309807 CDS YP_445888.1 83816607 3853137 complement(2187960..2188781) 1 NC_007677.1 identified by match to protein family HMM PF02616; segregation and condensation protein A 2188781 scpA 3853137 scpA Salinibacter ruber DSM 13855 segregation and condensation protein A YP_445888.1 2187960 R 309807 CDS YP_445889.1 83815765 3852773 complement(2189042..2190028) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 2190028 galE 3852773 galE Salinibacter ruber DSM 13855 UDP-glucose 4-epimerase YP_445889.1 2189042 R 309807 CDS YP_445890.1 83814865 3851405 complement(2190178..2192346) 1 NC_007677.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 2192346 pnp 3851405 pnp Salinibacter ruber DSM 13855 polynucleotide phosphorylase/polyadenylase YP_445890.1 2190178 R 309807 CDS YP_445891.1 83815689 3850596 complement(2192458..2192724) 1 NC_007677.1 identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 2192724 rpsO 3850596 rpsO Salinibacter ruber DSM 13855 30S ribosomal protein S15 YP_445891.1 2192458 R 309807 CDS YP_445892.1 83814555 3850803 complement(2192850..2193785) 1 NC_007677.1 identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 2193785 ribF 3850803 ribF Salinibacter ruber DSM 13855 riboflavin biosynthesis protein RibF YP_445892.1 2192850 R 309807 CDS YP_445893.1 83815185 3851766 complement(2194052..2194450) 1 NC_007677.1 identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 2194450 rbfA 3851766 rbfA Salinibacter ruber DSM 13855 ribosome-binding factor A YP_445893.1 2194052 R 309807 CDS YP_445894.1 83815314 3852143 complement(2194527..2197616) 1 NC_007677.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 2197616 infB 3852143 infB Salinibacter ruber DSM 13855 translation initiation factor IF-2 YP_445894.1 2194527 R 309807 CDS YP_445895.1 83815918 3851608 complement(2197687..2199327) 1 NC_007677.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2199327 nusA 3851608 nusA Salinibacter ruber DSM 13855 transcription elongation factor NusA YP_445895.1 2197687 R 309807 CDS YP_445896.1 83816343 3851970 complement(2199391..2200044) 1 NC_007677.1 identified by match to protein family HMM PF02576; hypothetical protein 2200044 3851970 SRU_1779 Salinibacter ruber DSM 13855 hypothetical protein YP_445896.1 2199391 R 309807 CDS YP_445897.1 83814103 3850916 complement(join(2200131..2201198,2201200..2201268)) 1 NC_007677.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 2201268 prfB 3850916 prfB Salinibacter ruber DSM 13855 peptide chain release factor 2 YP_445897.1 2200131 R 309807 CDS YP_445898.1 83814297 3851089 complement(2201376..2202608) 1 NC_007677.1 identified by match to protein family HMM PF00155; aspartate aminotransferase 2202608 aspB 3851089 aspB Salinibacter ruber DSM 13855 aspartate aminotransferase YP_445898.1 2201376 R 309807 CDS YP_445899.1 83815678 3851015 2202666..2204255 1 NC_007677.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 2204255 3851015 SRU_1782 Salinibacter ruber DSM 13855 aldehyde dehydrogenase (NAD) family protein YP_445899.1 2202666 D 309807 CDS YP_445900.1 83815238 3851039 complement(2204394..2204702) 1 NC_007677.1 hypothetical protein 2204702 3851039 SRU_1783 Salinibacter ruber DSM 13855 hypothetical protein YP_445900.1 2204394 R 309807 CDS YP_445901.1 83814472 3851791 complement(2204881..2205231) 1 NC_007677.1 hypothetical protein 2205231 3851791 SRU_1784 Salinibacter ruber DSM 13855 hypothetical protein YP_445901.1 2204881 R 309807 CDS YP_445902.1 83816422 3851762 complement(2205311..2206042) 1 NC_007677.1 hypothetical protein 2206042 3851762 SRU_1785 Salinibacter ruber DSM 13855 hypothetical protein YP_445902.1 2205311 R 309807 CDS YP_445903.1 83815389 3850901 complement(2206106..2207587) 1 NC_007677.1 identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949; NAD-dependent malic enzyme 2207587 3850901 SRU_1786 Salinibacter ruber DSM 13855 NAD-dependent malic enzyme YP_445903.1 2206106 R 309807 CDS YP_445904.1 83814780 3850872 complement(2207688..2210303) 1 NC_007677.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717; 30S ribosomal protein S1 2210303 3850872 SRU_1787 Salinibacter ruber DSM 13855 30S ribosomal protein S1 YP_445904.1 2207688 R 309807 CDS YP_445905.1 83814358 3851346 complement(2210526..2211209) 1 NC_007677.1 identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 2211209 cmk 3851346 cmk Salinibacter ruber DSM 13855 cytidylate kinase YP_445905.1 2210526 R 309807 CDS YP_445906.1 83815999 3851651 complement(2211257..2211985) 1 NC_007677.1 hypothetical protein 2211985 3851651 SRU_1789 Salinibacter ruber DSM 13855 hypothetical protein YP_445906.1 2211257 R 309807 CDS YP_445907.1 83815691 3850598 2211984..2212547 1 NC_007677.1 identified by match to protein family HMM PF00588; SpoU rRNA methylase family protein 2212547 3850598 SRU_1790 Salinibacter ruber DSM 13855 SpoU rRNA methylase family protein YP_445907.1 2211984 D 309807 CDS YP_445908.1 83815695 3850602 2212682..2214628 1 NC_007677.1 identified by match to protein family HMM PF01642; methylmalonyl-CoA mutase superfamily protein 2214628 3850602 SRU_1791 Salinibacter ruber DSM 13855 methylmalonyl-CoA mutase superfamily protein YP_445908.1 2212682 D 309807 CDS YP_445909.1 83815583 3850764 2214693..2216846 1 NC_007677.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2216846 mutA 3850764 mutA Salinibacter ruber DSM 13855 methylmalonyl-CoA mutase YP_445909.1 2214693 D 309807 CDS YP_445910.1 83816183 3851562 2216891..2217928 1 NC_007677.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2217928 3851562 SRU_1793 Salinibacter ruber DSM 13855 arginine/ornithine transport system ATPase YP_445910.1 2216891 D 309807 CDS YP_445911.1 83814401 3851174 2217973..2218518 1 NC_007677.1 hypothetical protein 2218518 3851174 SRU_1794 Salinibacter ruber DSM 13855 hypothetical protein YP_445911.1 2217973 D 309807 CDS YP_445912.1 83815001 3853040 2218611..2220977 1 NC_007677.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2220977 3853040 SRU_1795 Salinibacter ruber DSM 13855 glutaminyl-tRNA synthetase YP_445912.1 2218611 D 309807 CDS YP_445913.1 83816484 3852853 complement(2221011..2222531) 1 NC_007677.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2222531 gltX 3852853 gltX Salinibacter ruber DSM 13855 glutamyl-tRNA synthetase YP_445913.1 2221011 R 309807 CDS YP_445914.1 83814441 3850727 2222779..2224836 1 NC_007677.1 identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase domain-containing protein 2224836 3850727 SRU_1797 Salinibacter ruber DSM 13855 peptidyl-prolyl cis-trans isomerase domain-containing protein YP_445914.1 2222779 D 309807 CDS YP_445915.1 83815274 3851055 2224814..2225728 1 NC_007677.1 hypothetical protein 2225728 3851055 SRU_1798 Salinibacter ruber DSM 13855 hypothetical protein YP_445915.1 2224814 D 309807 CDS YP_445916.1 83816066 3853176 2225783..2227177 1 NC_007677.1 identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase 2227177 3853176 SRU_1799 Salinibacter ruber DSM 13855 peptidyl-prolyl cis-trans isomerase YP_445916.1 2225783 D 309807 CDS YP_445917.1 83815892 3851582 2227252..2228247 1 NC_007677.1 identified by match to protein family HMM PF07726; methanol dehydrogenase regulator 2228247 moxR 3851582 moxR Salinibacter ruber DSM 13855 methanol dehydrogenase regulator YP_445917.1 2227252 D 309807 CDS YP_445918.1 83816689 3852690 2228339..2229175 1 NC_007677.1 identified by match to protein family HMM PF00175; ferredoxin NADP+ reductase 2229175 3852690 SRU_1801 Salinibacter ruber DSM 13855 ferredoxin NADP+ reductase YP_445918.1 2228339 D 309807 CDS YP_445919.1 83814453 3852194 2229305..2229871 1 NC_007677.1 identified by match to protein family HMM PF04186; FxsA cytoplasmic membrane protein 2229871 3852194 SRU_1802 Salinibacter ruber DSM 13855 FxsA cytoplasmic membrane protein YP_445919.1 2229305 D 309807 CDS YP_445920.1 83815077 3852373 complement(2229900..2230724) 1 NC_007677.1 hypothetical protein 2230724 3852373 SRU_1803 Salinibacter ruber DSM 13855 hypothetical protein YP_445920.1 2229900 R 309807 CDS YP_445921.1 83815712 3850619 2230909..2231364 1 NC_007677.1 hypothetical protein 2231364 3850619 SRU_1804 Salinibacter ruber DSM 13855 hypothetical protein YP_445921.1 2230909 D 309807 CDS YP_445922.1 83816337 3851964 2231430..2232878 1 NC_007677.1 identified by match to protein family HMM PF00557; match to protein family HMM PF05195; Xaa-Pro dipeptidase 2232878 pepP 3851964 pepP Salinibacter ruber DSM 13855 Xaa-Pro dipeptidase YP_445922.1 2231430 D 309807 CDS YP_445923.1 83814136 3850929 complement(2232914..2236258) 1 NC_007677.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase 2236258 3850929 SRU_1806 Salinibacter ruber DSM 13855 ATP-dependent DNA helicase YP_445923.1 2232914 R 309807 CDS YP_445924.1 83816080 3850560 complement(2236388..2239609) 1 NC_007677.1 hypothetical protein 2239609 3850560 SRU_1807 Salinibacter ruber DSM 13855 hypothetical protein YP_445924.1 2236388 R 309807 CDS YP_445925.1 83814668 3852253 complement(2239616..2240161) 1 NC_007677.1 identified by match to protein family HMM PF00565; protein parB 2240161 3852253 SRU_1808 Salinibacter ruber DSM 13855 protein parB YP_445925.1 2239616 R 309807 CDS YP_445926.1 83816572 3851916 2240698..2242020 1 NC_007677.1 hypothetical protein 2242020 3851916 SRU_1809 Salinibacter ruber DSM 13855 hypothetical protein YP_445926.1 2240698 D 309807 CDS YP_445927.1 83815904 3851594 2242093..2242434 1 NC_007677.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 2242434 3851594 SRU_1810 Salinibacter ruber DSM 13855 antibiotic biosynthesis monooxygenase domain-containing protein YP_445927.1 2242093 D 309807 CDS YP_445928.1 83814533 3852608 complement(2242509..2243135) 1 NC_007677.1 hypothetical protein 2243135 3852608 SRU_1811 Salinibacter ruber DSM 13855 hypothetical protein YP_445928.1 2242509 R 309807 CDS YP_445929.1 83815128 3852935 2243266..2246994 1 NC_007677.1 hypothetical protein 2246994 3852935 SRU_1812 Salinibacter ruber DSM 13855 hypothetical protein YP_445929.1 2243266 D 309807 CDS YP_445930.1 83814488 3851710 2248053..2249105 1 NC_007677.1 identified by match to protein family HMM PF01699; Na+/Ca2+-exchanging protein 2249105 nce 3851710 nce Salinibacter ruber DSM 13855 Na+/Ca2+-exchanging protein YP_445930.1 2248053 D 309807 CDS YP_445931.1 83816782 3851210 complement(2249147..2249551) 1 NC_007677.1 identified by similarity to SP:P39903; match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2249551 msrB 3851210 msrB Salinibacter ruber DSM 13855 methionine-R-sulfoxide reductase YP_445931.1 2249147 R 309807 CDS YP_445932.1 83816138 3850540 complement(2249600..2251651) 1 NC_007677.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protein FtsH 2251651 ftsH 3850540 ftsH Salinibacter ruber DSM 13855 cell division protein FtsH YP_445932.1 2249600 R 309807 CDS YP_445933.1 83814799 3852404 2252046..2253920 1 NC_007677.1 identified by match to protein family HMM PF00501; acetyl-CoA synthetase 2253920 acs 3852404 acs Salinibacter ruber DSM 13855 acetyl-CoA synthetase YP_445933.1 2252046 D 309807 CDS YP_445934.1 83814191 3850868 2254028..2255128 1 NC_007677.1 hypothetical protein 2255128 3850868 SRU_1821 Salinibacter ruber DSM 13855 hypothetical protein YP_445934.1 2254028 D 309807 CDS YP_445935.1 83814478 3851797 complement(2255142..2255510) 1 NC_007677.1 identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 2255510 3851797 SRU_1822 Salinibacter ruber DSM 13855 hypothetical protein YP_445935.1 2255142 R 309807 CDS YP_445936.1 83815801 3852184 complement(2255532..2256128) 1 NC_007677.1 hypothetical protein 2256128 3852184 SRU_1823 Salinibacter ruber DSM 13855 hypothetical protein YP_445936.1 2255532 R 309807 CDS YP_445937.1 83814680 3852265 2256155..2257225 1 NC_007677.1 identified by match to protein family HMM PF01887; hypothetical protein 2257225 3852265 SRU_1824 Salinibacter ruber DSM 13855 hypothetical protein YP_445937.1 2256155 D 309807 CDS YP_445938.1 83815290 3850956 2257271..2258542 1 NC_007677.1 hypothetical protein 2258542 3850956 SRU_1825 Salinibacter ruber DSM 13855 hypothetical protein YP_445938.1 2257271 D 309807 CDS YP_445939.1 83816299 3852061 complement(2258546..2259784) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2259784 vicK 3852061 vicK Salinibacter ruber DSM 13855 sensor histidine kinase YP_445939.1 2258546 R 309807 CDS YP_445940.1 83814082 3850405 complement(2260037..2261356) 1 NC_007677.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2261356 purA 3850405 purA Salinibacter ruber DSM 13855 adenylosuccinate synthetase YP_445940.1 2260037 R 309807 CDS YP_445941.1 83814389 3851162 complement(2261410..2262321) 1 NC_007677.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2262321 secF 3851162 secF Salinibacter ruber DSM 13855 preprotein translocase subunit SecF YP_445941.1 2261410 R 309807 CDS YP_445942.2 161986636 3852436 complement(2262382..2264346) 1 NC_007677.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2264346 secD 3852436 secD Salinibacter ruber DSM 13855 preprotein translocase subunit SecD YP_445942.2 2262382 R 309807 CDS YP_445943.1 83816533 3852007 2264931..2265830 1 NC_007677.1 identified by match to protein family HMM PF00561; lysophospholipase 2265830 3852007 SRU_1831 Salinibacter ruber DSM 13855 lysophospholipase YP_445943.1 2264931 D 309807 CDS YP_445944.1 83815912 3851602 complement(2265811..2266554) 1 NC_007677.1 identified by match to protein family HMM PF04402; hypothetical protein 2266554 3851602 SRU_1830 Salinibacter ruber DSM 13855 hypothetical protein YP_445944.1 2265811 R 309807 CDS YP_445945.1 83815569 3852242 complement(2266701..2268335) 1 NC_007677.1 identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparaginyl-tRNA synthetase 2268335 asnS 3852242 asnS Salinibacter ruber DSM 13855 asparaginyl-tRNA synthetase YP_445945.1 2266701 R 309807 CDS YP_445946.1 83816503 3851977 complement(2268382..2269245) 1 NC_007677.1 hypothetical protein 2269245 3851977 SRU_1833 Salinibacter ruber DSM 13855 hypothetical protein YP_445946.1 2268382 R 309807 CDS YP_445947.1 83814080 3850403 2269233..2269394 1 NC_007677.1 hypothetical protein 2269394 3850403 SRU_1834 Salinibacter ruber DSM 13855 hypothetical protein YP_445947.1 2269233 D 309807 CDS YP_445948.1 83815242 3851043 2269506..2271113 1 NC_007677.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2271113 pckA 3851043 pckA Salinibacter ruber DSM 13855 phosphoenolpyruvate carboxykinase YP_445948.1 2269506 D 309807 CDS YP_445949.1 83815007 3853046 complement(2271618..2272052) 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 2272052 3853046 SRU_1837 Salinibacter ruber DSM 13855 acetyltransferase YP_445949.1 2271618 R 309807 CDS YP_445950.1 83816542 3851885 complement(2272220..2273311) 1 NC_007677.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase 2273311 asd 3851885 asd Salinibacter ruber DSM 13855 aspartate-semialdehyde dehydrogenase YP_445950.1 2272220 R 309807 CDS YP_445951.1 83816241 3852904 2273541..2274434 1 NC_007677.1 identified by match to protein family HMM PF00763; match to protein family HMM PF02882; FolD bifunctional protein 2274434 3852904 SRU_1839 Salinibacter ruber DSM 13855 FolD bifunctional protein YP_445951.1 2273541 D 309807 CDS YP_445952.1 83814207 3850648 2274471..2275505 1 NC_007677.1 identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 2275505 3850648 SRU_1840 Salinibacter ruber DSM 13855 small conductance mechanosensitive ion channel (MscS) family protein YP_445952.1 2274471 D 309807 CDS YP_445953.1 83816056 3853166 complement(2275514..2275933) 1 NC_007677.1 identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149; hypothetical protein 2275933 3853166 SRU_1841 Salinibacter ruber DSM 13855 hypothetical protein YP_445953.1 2275514 R 309807 CDS YP_445954.1 83816829 3851139 complement(2275967..2276785) 1 NC_007677.1 identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE 2276785 surE 3851139 surE Salinibacter ruber DSM 13855 acid phosphatase SurE YP_445954.1 2275967 R 309807 CDS YP_445955.1 83814429 3850715 complement(2276859..2277656) 1 NC_007677.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2277656 panB 3850715 panB Salinibacter ruber DSM 13855 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_445955.1 2276859 R 309807 CDS YP_445956.1 83815252 3853020 complement(2277838..2278443) 1 NC_007677.1 identified by match to protein family HMM PF03938; outer membrane lipoprotein 2278443 3853020 SRU_1844 Salinibacter ruber DSM 13855 outer membrane lipoprotein YP_445956.1 2277838 R 309807 CDS YP_445957.1 83814947 3851330 complement(2278507..2279115) 1 NC_007677.1 outer membrane protein OmpH 2279115 3851330 SRU_1845 Salinibacter ruber DSM 13855 outer membrane protein OmpH YP_445957.1 2278507 R 309807 CDS YP_445958.1 83814900 3852349 complement(2279173..2281707) 1 NC_007677.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein 2281707 3852349 SRU_1846 Salinibacter ruber DSM 13855 outer membrane protein YP_445958.1 2279173 R 309807 CDS YP_445959.1 83814114 3850927 complement(2281877..2282803) 1 NC_007677.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 2282803 uppS 3850927 uppS Salinibacter ruber DSM 13855 undecaprenyl diphosphate synthase YP_445959.1 2281877 R 309807 CDS YP_445960.1 83814616 3851468 complement(2282874..2284316) 1 NC_007677.1 identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease 2284316 3851468 SRU_1848 Salinibacter ruber DSM 13855 membrane-associated zinc metalloprotease YP_445960.1 2282874 R 309807 CDS YP_445961.2 161986633 3850434 complement(2284386..2285591) 1 NC_007677.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2285591 dxr 3850434 dxr Salinibacter ruber DSM 13855 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_445961.2 2284386 R 309807 CDS YP_445962.1 83814353 3851341 2285775..2287658 1 NC_007677.1 hypothetical protein 2287658 3851341 SRU_1850 Salinibacter ruber DSM 13855 hypothetical protein YP_445962.1 2285775 D 309807 CDS YP_445963.1 83816387 3851727 2287710..2288987 1 NC_007677.1 hypothetical protein 2288987 3851727 SRU_1851 Salinibacter ruber DSM 13855 hypothetical protein YP_445963.1 2287710 D 309807 CDS YP_445964.1 83814977 3851186 2289039..2289593 1 NC_007677.1 identified by match to protein family HMM PF03061; thioesterase domain-containing protein 2289593 3851186 SRU_1852 Salinibacter ruber DSM 13855 thioesterase domain-containing protein YP_445964.1 2289039 D 309807 CDS YP_445965.1 83814226 3850471 2289643..2290086 1 NC_007677.1 sigma-54 interacting transcription regulator protein 2290086 3850471 SRU_1853 Salinibacter ruber DSM 13855 sigma-54 interacting transcription regulator protein YP_445965.1 2289643 D 309807 CDS YP_445966.1 83816254 3852917 2290114..2291037 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; dTDP-4-dehydrorhamnose reductase 2291037 3852917 SRU_1854 Salinibacter ruber DSM 13855 dTDP-4-dehydrorhamnose reductase YP_445966.1 2290114 D 309807 CDS YP_445967.1 83815326 3852116 2291084..2292370 1 NC_007677.1 identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 2292370 serS 3852116 serS Salinibacter ruber DSM 13855 seryl-tRNA synthetase YP_445967.1 2291084 D 309807 CDS YP_445968.1 83814754 3851372 complement(2292470..2293660) 1 NC_007677.1 identified by match to protein family HMM PF00316; fructose-1,6-bisphosphatase 2293660 fbp 3851372 fbp Salinibacter ruber DSM 13855 fructose-1,6-bisphosphatase YP_445968.1 2292470 R 309807 CDS YP_445969.1 83815281 3850947 complement(2293671..2294381) 1 NC_007677.1 hypothetical protein 2294381 3850947 SRU_1857 Salinibacter ruber DSM 13855 hypothetical protein YP_445969.1 2293671 R 309807 CDS YP_445970.1 83814679 3852264 complement(2294391..2295677) 1 NC_007677.1 identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase 2295677 3852264 SRU_1858 Salinibacter ruber DSM 13855 cysteine desulfurase YP_445970.1 2294391 R 309807 CDS YP_445971.1 83816608 3853138 2295679..2297106 1 NC_007677.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2297106 murA 3853138 murA Salinibacter ruber DSM 13855 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_445971.1 2295679 D 309807 CDS YP_445972.1 83815916 3851606 complement(2297164..2300652) 1 NC_007677.1 hypothetical protein 2300652 3851606 SRU_1860 Salinibacter ruber DSM 13855 hypothetical protein YP_445972.1 2297164 R 309807 CDS YP_445973.1 83815664 3851001 complement(2300831..2301754) 1 NC_007677.1 identified by match to protein family HMM PF01436; hypothetical protein 2301754 3851001 SRU_1861 Salinibacter ruber DSM 13855 hypothetical protein YP_445973.1 2300831 R 309807 CDS YP_445974.1 83815034 3852623 complement(2301769..2303061) 1 NC_007677.1 identified by match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 2303061 purD 3852623 purD Salinibacter ruber DSM 13855 phosphoribosylamine--glycine ligase YP_445974.1 2301769 R 309807 CDS YP_445975.1 83816333 3851960 2303166..2304461 1 NC_007677.1 hypothetical protein 2304461 3851960 SRU_1863 Salinibacter ruber DSM 13855 hypothetical protein YP_445975.1 2303166 D 309807 CDS YP_445976.1 83816016 3851668 2304400..2305497 1 NC_007677.1 hypothetical protein 2305497 3851668 SRU_1864 Salinibacter ruber DSM 13855 hypothetical protein YP_445976.1 2304400 D 309807 CDS YP_445977.1 83815359 3850655 2305545..2306192 1 NC_007677.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase 2306192 3850655 SRU_1865 Salinibacter ruber DSM 13855 polysaccharide deacetylase YP_445977.1 2305545 D 309807 CDS YP_445978.1 83814227 3850472 2306332..2309064 1 NC_007677.1 identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01341; aconitate hydratase 1 2309064 acnA 3850472 acnA Salinibacter ruber DSM 13855 aconitate hydratase 1 YP_445978.1 2306332 D 309807 CDS YP_445979.1 83816474 3852842 complement(2309107..2309511) 1 NC_007677.1 identified by match to protein family HMM PF00376; transcription regulator protein 2309511 3852842 SRU_1867 Salinibacter ruber DSM 13855 transcription regulator protein YP_445979.1 2309107 R 309807 CDS YP_445980.1 83816476 3852844 complement(2309553..2312612) 1 NC_007677.1 exonuclease SbcC 2312612 3852844 SRU_1868 Salinibacter ruber DSM 13855 exonuclease SbcC YP_445980.1 2309553 R 309807 CDS YP_445981.1 83815643 3850707 complement(2312703..2313227) 1 NC_007677.1 hypothetical protein 2313227 3850707 SRU_1869 Salinibacter ruber DSM 13855 hypothetical protein YP_445981.1 2312703 R 309807 CDS YP_445982.1 83814515 3852452 complement(2313243..2313803) 1 NC_007677.1 identified by match to protein family HMM PF02674; CvpA family protein 2313803 cvpA 3852452 cvpA Salinibacter ruber DSM 13855 CvpA family protein YP_445982.1 2313243 R 309807 CDS YP_445983.1 83816598 3853128 complement(2313993..2314523) 1 NC_007677.1 identified by match to protein family HMM PF02637; GatB/YqeY domain-containing protein 2314523 3853128 SRU_1871 Salinibacter ruber DSM 13855 GatB/YqeY domain-containing protein YP_445983.1 2313993 R 309807 CDS YP_445984.1 83815408 3852983 complement(2314542..2316389) 1 NC_007677.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 2316389 ptsI 3852983 ptsI Salinibacter ruber DSM 13855 phosphoenolpyruvate-protein phosphotransferase YP_445984.1 2314542 R 309807 CDS YP_445985.1 83814113 3850926 complement(2316435..2316704) 1 NC_007677.1 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; HPr-like protein crh 2316704 3850926 SRU_1873 Salinibacter ruber DSM 13855 HPr-like protein crh YP_445985.1 2316435 R 309807 CDS YP_445986.1 83816814 3851124 complement(2316800..2317828) 1 NC_007677.1 identified by match to protein family HMM PF00348; polyprenyl synthetase 2317828 idsA 3851124 idsA Salinibacter ruber DSM 13855 polyprenyl synthetase YP_445986.1 2316800 R 309807 CDS YP_445987.1 83815982 3852719 complement(2317850..2318488) 1 NC_007677.1 identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 2318488 adk 3852719 adk Salinibacter ruber DSM 13855 adenylate kinase YP_445987.1 2317850 R 309807 CDS YP_445988.1 83815191 3851772 complement(2318546..2319067) 1 NC_007677.1 hypothetical protein 2319067 3851772 SRU_1876 Salinibacter ruber DSM 13855 hypothetical protein YP_445988.1 2318546 R 309807 CDS YP_445989.1 83816807 3851235 complement(2319125..2319562) 1 NC_007677.1 hypothetical protein 2319562 3851235 SRU_1877 Salinibacter ruber DSM 13855 hypothetical protein YP_445989.1 2319125 R 309807 CDS YP_445990.1 83816071 3853181 2319674..2320102 1 NC_007677.1 hypothetical protein 2320102 3853181 SRU_1878 Salinibacter ruber DSM 13855 hypothetical protein YP_445990.1 2319674 D 309807 CDS YP_445991.1 83814852 3852789 complement(2320105..2321253) 1 NC_007677.1 hypothetical protein 2321253 3852789 SRU_1879 Salinibacter ruber DSM 13855 hypothetical protein YP_445991.1 2320105 R 309807 CDS YP_445992.1 83816455 3852822 2321348..2322589 1 NC_007677.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2322589 ispH 3852822 ispH Salinibacter ruber DSM 13855 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_445992.1 2321348 D 309807 CDS YP_445993.1 83815687 3851024 2322682..2323425 1 NC_007677.1 methyltransferase 2323425 3851024 SRU_1881 Salinibacter ruber DSM 13855 methyltransferase YP_445993.1 2322682 D 309807 CDS YP_445994.1 83816715 3850832 2323603..2324973 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20/M25/M40 family peptidase 2324973 3850832 SRU_1882 Salinibacter ruber DSM 13855 M20/M25/M40 family peptidase YP_445994.1 2323603 D 309807 CDS YP_445995.1 83814559 3850807 2325773..2326888 1 NC_007677.1 identified by match to protein family HMM TIGR00374; hypothetical protein 2326888 3850807 SRU_1884 Salinibacter ruber DSM 13855 hypothetical protein YP_445995.1 2325773 D 309807 CDS YP_445996.1 83814059 3852463 complement(2326923..2327378) 1 NC_007677.1 zinc transporter 2327378 3852463 SRU_1885 Salinibacter ruber DSM 13855 zinc transporter YP_445996.1 2326923 R 309807 CDS YP_445997.1 83814810 3852415 complement(2327865..2329181) 1 NC_007677.1 identified by match to protein family HMM PF02492; match to protein family HMM PF07683; CobW/P47K family protein 2329181 3852415 SRU_1886 Salinibacter ruber DSM 13855 CobW/P47K family protein YP_445997.1 2327865 R 309807 CDS YP_445998.1 83815812 3851618 complement(2329201..2331603) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor protein 2331603 3851618 SRU_1887 Salinibacter ruber DSM 13855 outer membrane receptor protein YP_445998.1 2329201 R 309807 CDS YP_445999.1 83816411 3851751 2332260..2332874 1 NC_007677.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 2332874 3851751 SRU_1888 Salinibacter ruber DSM 13855 NUDIX family hydrolase YP_445999.1 2332260 D 309807 CDS YP_446000.1 83814499 3851721 complement(2332922..2333362) 1 NC_007677.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 2333362 3851721 SRU_1889 Salinibacter ruber DSM 13855 NUDIX family hydrolase YP_446000.1 2332922 R 309807 CDS YP_446001.1 83815135 3852942 complement(2333355..2334137) 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; pyridoxal phosphate phosphatase 2334137 3852942 SRU_1890 Salinibacter ruber DSM 13855 pyridoxal phosphate phosphatase YP_446001.1 2333355 R 309807 CDS YP_446002.1 83814635 3851448 complement(2337183..2337683) 1 NC_007677.1 hypothetical protein 2337683 3851448 SRU_1891 Salinibacter ruber DSM 13855 hypothetical protein YP_446002.1 2337183 R 309807 CDS YP_446003.1 83816385 3851881 complement(2337819..2338421) 1 NC_007677.1 hypothetical protein 2338421 3851881 SRU_1892 Salinibacter ruber DSM 13855 hypothetical protein YP_446003.1 2337819 R 309807 CDS YP_446004.1 83815509 3852319 complement(2338648..2339067) 1 NC_007677.1 hypothetical protein 2339067 3852319 SRU_1893 Salinibacter ruber DSM 13855 hypothetical protein YP_446004.1 2338648 R 309807 CDS YP_446005.1 83816453 3852820 complement(2339177..2340829) 1 NC_007677.1 identified by match to protein family HMM PF01433; metallopeptidase 2340829 3852820 SRU_1894 Salinibacter ruber DSM 13855 metallopeptidase YP_446005.1 2339177 R 309807 CDS YP_446006.1 83816018 3851670 complement(2340851..2341561) 1 NC_007677.1 hypothetical protein 2341561 3851670 SRU_1895 Salinibacter ruber DSM 13855 hypothetical protein YP_446006.1 2340851 R 309807 CDS YP_446007.1 83814856 3851396 complement(2341811..2342938) 1 NC_007677.1 hypothetical protein 2342938 3851396 SRU_1896 Salinibacter ruber DSM 13855 hypothetical protein YP_446007.1 2341811 R 309807 CDS YP_446008.1 83815433 3852282 2343173..2343472 1 NC_007677.1 identified by match to protein family HMM TIGR02605; FmdB family regulatory protein 2343472 3852282 SRU_1898 Salinibacter ruber DSM 13855 FmdB family regulatory protein YP_446008.1 2343173 D 309807 CDS YP_446009.1 83814581 3852970 complement(2343520..2343903) 1 NC_007677.1 identified by match to protein family HMM PF00111; ferredoxin 2343903 fdx 3852970 fdx Salinibacter ruber DSM 13855 ferredoxin YP_446009.1 2343520 R 309807 CDS YP_446010.1 83816642 3852096 2344117..2344746 1 NC_007677.1 identified by match to protein family HMM PF00293; match to protein family HMM TIGR02150; isopentenyl-diphosphate delta-isomerase 2344746 idi 3852096 idi Salinibacter ruber DSM 13855 isopentenyl-diphosphate delta-isomerase YP_446010.1 2344117 D 309807 CDS YP_446011.1 83815820 3851626 2345162..2345977 1 NC_007677.1 identified by match to protein family HMM PF04784; hypothetical protein 2345977 3851626 SRU_1901 Salinibacter ruber DSM 13855 hypothetical protein YP_446011.1 2345162 D 309807 CDS YP_446012.1 83816259 3852922 2346090..2347616 1 NC_007677.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2347616 gatB 3852922 gatB Salinibacter ruber DSM 13855 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_446012.1 2346090 D 309807 CDS YP_446013.1 83814089 3850412 2347625..2349043 1 NC_007677.1 hypothetical protein 2349043 3850412 SRU_1903 Salinibacter ruber DSM 13855 hypothetical protein YP_446013.1 2347625 D 309807 CDS YP_446014.1 83814838 3852775 2349075..2349734 1 NC_007677.1 hypothetical protein 2349734 3852775 SRU_1904 Salinibacter ruber DSM 13855 hypothetical protein YP_446014.1 2349075 D 309807 CDS YP_446015.1 83815814 3851620 2349782..2350564 1 NC_007677.1 identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase 2350564 tpiA 3851620 tpiA Salinibacter ruber DSM 13855 triosephosphate isomerase YP_446015.1 2349782 D 309807 CDS YP_446016.1 83814466 3851785 2350591..2351904 1 NC_007677.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2351904 3851785 SRU_1906 Salinibacter ruber DSM 13855 fructose-bisphosphate aldolase YP_446016.1 2350591 D 309807 CDS YP_446017.1 83815273 3851054 complement(2352108..2353013) 1 NC_007677.1 hypothetical protein 2353013 3851054 SRU_1907 Salinibacter ruber DSM 13855 hypothetical protein YP_446017.1 2352108 R 309807 CDS YP_446018.1 83816092 3850572 2353176..2354993 1 NC_007677.1 identified by match to protein family HMM PF00004; cell division protein 2354993 3850572 SRU_1908 Salinibacter ruber DSM 13855 cell division protein YP_446018.1 2353176 D 309807 CDS YP_446019.1 83816733 3850850 2355029..2356873 1 NC_007677.1 identified by match to protein family HMM PF01979; amidohydrolase family protein 2356873 3850850 SRU_1909 Salinibacter ruber DSM 13855 amidohydrolase family protein YP_446019.1 2355029 D 309807 CDS YP_446020.1 83814482 3851801 2356951..2358378 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 2358378 3851801 SRU_1910 Salinibacter ruber DSM 13855 amidohydrolase YP_446020.1 2356951 D 309807 CDS YP_446021.1 83815248 3853016 2358428..2359771 1 NC_007677.1 identified by match to protein family HMM PF01979; amidohydrolase 2359771 3853016 SRU_1911 Salinibacter ruber DSM 13855 amidohydrolase YP_446021.1 2358428 D 309807 CDS YP_446022.1 83816418 3851758 complement(2359898..2360992) 1 NC_007677.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2360992 nadA 3851758 nadA Salinibacter ruber DSM 13855 quinolinate synthetase YP_446022.1 2359898 R 309807 CDS YP_446023.1 83816699 3850816 complement(2361049..2361903) 1 NC_007677.1 identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase 2361903 nadC 3850816 nadC Salinibacter ruber DSM 13855 nicotinate-nucleotide pyrophosphorylase YP_446023.1 2361049 R 309807 CDS YP_446024.1 83816094 3850574 complement(2362028..2363524) 1 NC_007677.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; FAD binding domain-containing protein 2363524 3850574 SRU_1914 Salinibacter ruber DSM 13855 FAD binding domain-containing protein YP_446024.1 2362028 R 309807 CDS YP_446025.1 83815431 3852280 complement(2363745..2364170) 1 NC_007677.1 identified by match to protein family HMM PF00041; cellulose-binding domain-containing protein 2364170 3852280 SRU_1915 Salinibacter ruber DSM 13855 cellulose-binding domain-containing protein YP_446025.1 2363745 R 309807 CDS YP_446026.1 83814608 3851460 complement(2364216..2367968) 1 NC_007677.1 identified by match to protein family HMM PF01336; OB-fold nucleic acid binding domain-containing protein 2367968 3851460 SRU_1916 Salinibacter ruber DSM 13855 OB-fold nucleic acid binding domain-containing protein YP_446026.1 2364216 R 309807 CDS YP_446027.1 83816292 3852054 complement(2368204..2370414) 1 NC_007677.1 hypothetical protein 2370414 3852054 SRU_1917 Salinibacter ruber DSM 13855 hypothetical protein YP_446027.1 2368204 R 309807 CDS YP_446028.1 83815772 3852155 complement(2370615..2371433) 1 NC_007677.1 hypothetical protein 2371433 3852155 SRU_1918 Salinibacter ruber DSM 13855 hypothetical protein YP_446028.1 2370615 R 309807 CDS YP_446029.1 83814949 3851332 complement(2371666..2375016) 1 NC_007677.1 hypothetical protein 2375016 3851332 SRU_1919 Salinibacter ruber DSM 13855 hypothetical protein YP_446029.1 2371666 R 309807 CDS YP_446030.1 83815197 3851778 complement(2375370..2376269) 1 NC_007677.1 hypothetical protein 2376269 3851778 SRU_1920 Salinibacter ruber DSM 13855 hypothetical protein YP_446030.1 2375370 R 309807 CDS YP_446031.1 83814426 3853010 complement(2376514..2380029) 1 NC_007677.1 hypothetical protein 2380029 3853010 SRU_1921 Salinibacter ruber DSM 13855 hypothetical protein YP_446031.1 2376514 R 309807 CDS YP_446032.1 83814233 3852581 complement(2380435..2381127) 1 NC_007677.1 identified by match to protein family HMM PF07758; hypothetical protein 2381127 3852581 SRU_1922 Salinibacter ruber DSM 13855 hypothetical protein YP_446032.1 2380435 R 309807 CDS YP_446033.1 83816302 3852064 complement(2381142..2381849) 1 NC_007677.1 hypothetical protein 2381849 3852064 SRU_1923 Salinibacter ruber DSM 13855 hypothetical protein YP_446033.1 2381142 R 309807 CDS YP_446034.1 83815623 3850686 2382145..2382576 1 NC_007677.1 hypothetical protein 2382576 3850686 SRU_1924 Salinibacter ruber DSM 13855 hypothetical protein YP_446034.1 2382145 D 309807 CDS YP_446035.1 83815444 3850741 2382618..2383469 1 NC_007677.1 identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 2383469 3850741 SRU_1925 Salinibacter ruber DSM 13855 carbon-nitrogen family hydrolase YP_446035.1 2382618 D 309807 CDS YP_446036.1 83814649 3851423 complement(2383497..2383973) 1 NC_007677.1 hypothetical protein 2383973 3851423 SRU_1926 Salinibacter ruber DSM 13855 hypothetical protein YP_446036.1 2383497 R 309807 CDS YP_446037.1 83816691 3852692 2384139..2384366 1 NC_007677.1 hypothetical protein 2384366 3852692 SRU_1927 Salinibacter ruber DSM 13855 hypothetical protein YP_446037.1 2384139 D 309807 CDS YP_446038.1 83815420 3852269 2384429..2386411 1 NC_007677.1 hypothetical protein 2386411 3852269 SRU_1928 Salinibacter ruber DSM 13855 hypothetical protein YP_446038.1 2384429 D 309807 CDS YP_446039.1 83814630 3851443 2386559..2387842 1 NC_007677.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2387842 glgC 3851443 glgC Salinibacter ruber DSM 13855 glucose-1-phosphate adenylyltransferase YP_446039.1 2386559 D 309807 CDS YP_446040.1 83816539 3852013 2387901..2389208 1 NC_007677.1 identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149; glycosyl transferase family protein 2389208 3852013 SRU_1930 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_446040.1 2387901 D 309807 CDS YP_446041.1 83816457 3852824 2389603..2389896 1 NC_007677.1 identified by match to protein family HMM PF04255; hypothetical protein 2389896 3852824 SRU_1931 Salinibacter ruber DSM 13855 hypothetical protein YP_446041.1 2389603 D 309807 CDS YP_446042.1 83815383 3850895 complement(2390741..2391004) 1 NC_007677.1 hypothetical protein 2391004 3850895 SRU_1932 Salinibacter ruber DSM 13855 hypothetical protein YP_446042.1 2390741 R 309807 CDS YP_446043.1 83816024 3851676 complement(2391001..2392224) 1 NC_007677.1 identified by match to protein family HMM PF03576; T4 family peptidase 2392224 3851676 SRU_1933 Salinibacter ruber DSM 13855 T4 family peptidase YP_446043.1 2391001 R 309807 CDS YP_446044.1 83816244 3852907 2392349..2392924 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-H factor 2392924 3852907 SRU_1934 Salinibacter ruber DSM 13855 RNA polymerase sigma-H factor YP_446044.1 2392349 D 309807 CDS YP_446045.1 83814717 3851510 complement(2393272..2393844) 1 NC_007677.1 hypothetical protein 2393844 3851510 SRU_1935 Salinibacter ruber DSM 13855 hypothetical protein YP_446045.1 2393272 R 309807 CDS YP_446046.1 83815025 3852437 2393896..2395650 1 NC_007677.1 identified by match to protein family HMM PF02210; thrombospondin N-terminal-like domain-containing protein 2395650 3852437 SRU_1936 Salinibacter ruber DSM 13855 thrombospondin N-terminal-like domain-containing protein YP_446046.1 2393896 D 309807 CDS YP_446047.1 83815652 3850989 2395766..2396446 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 2396446 3850989 SRU_1937 Salinibacter ruber DSM 13855 metallo-beta-lactamase superfamily protein YP_446047.1 2395766 D 309807 CDS YP_446048.1 83815145 3852952 2396567..2397091 1 NC_007677.1 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphoesterase 2397091 3852952 SRU_1938 Salinibacter ruber DSM 13855 phosphoesterase YP_446048.1 2396567 D 309807 CDS YP_446049.1 83814893 3851315 complement(2397738..2399027) 1 NC_007677.1 hypothetical protein 2399027 3851315 SRU_1939 Salinibacter ruber DSM 13855 hypothetical protein YP_446049.1 2397738 R 309807 CDS YP_446050.1 83816017 3851669 2399249..2399923 1 NC_007677.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2399923 3851669 SRU_1940 Salinibacter ruber DSM 13855 translaldolase YP_446050.1 2399249 D 309807 CDS YP_446051.1 83816816 3851126 2400066..2401460 1 NC_007677.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; Ysh1p: subunit of polyadenylation factor I 2401460 3851126 SRU_1941 Salinibacter ruber DSM 13855 Ysh1p: subunit of polyadenylation factor I YP_446051.1 2400066 D 309807 CDS YP_446052.1 83816522 3851996 2402001..2404685 1 NC_007677.1 identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; FAD linked oxidase 2404685 3851996 SRU_1942 Salinibacter ruber DSM 13855 FAD linked oxidase YP_446052.1 2402001 D 309807 CDS YP_446053.1 83815212 3852293 complement(2404732..2406342) 1 NC_007677.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease 2406342 ctp 3852293 ctp Salinibacter ruber DSM 13855 carboxyl-terminal protease YP_446053.1 2404732 R 309807 CDS YP_446054.1 83814908 3852357 2406700..2407230 1 NC_007677.1 hypothetical protein 2407230 3852357 SRU_1944 Salinibacter ruber DSM 13855 hypothetical protein YP_446054.1 2406700 D 309807 CDS YP_446055.1 83815740 3852748 complement(2407353..2408045) 1 NC_007677.1 identified by similarity to SP:P24206; match to protein family HMM PF01135; match to protein family HMM TIGR00080; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2408045 pcm 3852748 pcm Salinibacter ruber DSM 13855 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_446055.1 2407353 R 309807 CDS YP_446056.1 83816195 3851808 complement(2408111..2408911) 1 NC_007677.1 identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein 2408911 3851808 SRU_1946 Salinibacter ruber DSM 13855 hypothetical protein YP_446056.1 2408111 R 309807 CDS YP_446057.1 83814714 3851507 complement(2408972..2409835) 1 NC_007677.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 2409835 folP 3851507 folP Salinibacter ruber DSM 13855 dihydropteroate synthase YP_446057.1 2408972 R 309807 CDS YP_446058.1 83816127 3850529 2410079..2411620 1 NC_007677.1 identified by match to protein family HMM PF03321; GH3 auxin-responsive promoter superfamily protein 2411620 3850529 SRU_1948 Salinibacter ruber DSM 13855 GH3 auxin-responsive promoter superfamily protein YP_446058.1 2410079 D 309807 CDS YP_446059.1 83815083 3852379 2411767..2412708 1 NC_007677.1 identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-70 factor 2412708 rpoD 3852379 rpoD Salinibacter ruber DSM 13855 RNA polymerase sigma-70 factor YP_446059.1 2411767 D 309807 CDS YP_446060.1 83814521 3852458 2412805..2413581 1 NC_007677.1 hypothetical protein 2413581 3852458 SRU_1950 Salinibacter ruber DSM 13855 hypothetical protein YP_446060.1 2412805 D 309807 CDS YP_446061.1 83816308 3852070 2413598..2415310 1 NC_007677.1 identified by match to protein family HMM PF03349; long-chain fatty acid transport protein 2415310 3852070 SRU_1951 Salinibacter ruber DSM 13855 long-chain fatty acid transport protein YP_446061.1 2413598 D 309807 CDS YP_446062.1 83815493 3853087 2415316..2416557 1 NC_007677.1 hypothetical protein 2416557 3853087 SRU_1952 Salinibacter ruber DSM 13855 hypothetical protein YP_446062.1 2415316 D 309807 CDS YP_446063.1 83815015 3852427 complement(2416565..2417551) 1 NC_007677.1 hypothetical protein 2417551 3852427 SRU_1953 Salinibacter ruber DSM 13855 hypothetical protein YP_446063.1 2416565 R 309807 CDS YP_446064.1 83814355 3851343 complement(2417601..2418566) 1 NC_007677.1 identified by match to protein family HMM PF02687; cell division ABC transporter permease FtsX 2418566 3851343 SRU_1954 Salinibacter ruber DSM 13855 cell division ABC transporter permease FtsX YP_446064.1 2417601 R 309807 CDS YP_446065.1 83816186 3851565 complement(2418897..2419757) 1 NC_007677.1 identified by match to protein family HMM PF00800; match to protein family HMM PF01842; prephenate dehydratase 2419757 pheA 3851565 pheA Salinibacter ruber DSM 13855 prephenate dehydratase YP_446065.1 2418897 R 309807 CDS YP_446066.1 83815570 3852243 complement(2420003..2420440) 1 NC_007677.1 identified by match to protein family HMM PF00011; heat shock protein 2420440 3852243 SRU_1956 Salinibacter ruber DSM 13855 heat shock protein YP_446066.1 2420003 R 309807 CDS YP_446067.1 83816030 3851682 complement(2420657..2422111) 1 NC_007677.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 2422111 3851682 SRU_1957 Salinibacter ruber DSM 13855 endonuclease/exonuclease/phosphatase family protein YP_446067.1 2420657 R 309807 CDS YP_446068.1 83816289 3852051 2422310..2423035 1 NC_007677.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 2423035 3852051 SRU_1958 Salinibacter ruber DSM 13855 phosphoglycerate mutase family protein YP_446068.1 2422310 D 309807 CDS YP_446069.1 83815288 3850954 complement(2423095..2424168) 1 NC_007677.1 hypothetical protein 2424168 3850954 SRU_1959 Salinibacter ruber DSM 13855 hypothetical protein YP_446069.1 2423095 R 309807 CDS YP_446070.1 83815910 3851600 2424397..2425695 1 NC_007677.1 hypothetical protein 2425695 3851600 SRU_1960 Salinibacter ruber DSM 13855 hypothetical protein YP_446070.1 2424397 D 309807 CDS YP_446071.1 83816612 3853142 complement(2425728..2426180) 1 NC_007677.1 identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5`-triphosphate nucleotidohydrolase 2426180 dut 3853142 dut Salinibacter ruber DSM 13855 deoxyuridine 5`-triphosphate nucleotidohydrolase YP_446071.1 2425728 R 309807 CDS YP_446072.1 83816463 3852830 complement(2426242..2428077) 1 NC_007677.1 identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; proton/peptide symporter family protein 2428077 3852830 SRU_1962 Salinibacter ruber DSM 13855 proton/peptide symporter family protein YP_446072.1 2426242 R 309807 CDS YP_446073.1 83814246 3852594 2428395..2430284 1 NC_007677.1 identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 2430284 aspS 3852594 aspS Salinibacter ruber DSM 13855 aspartyl-tRNA synthetase YP_446073.1 2428395 D 309807 CDS YP_446074.1 83814860 3851400 2430295..2430753 1 NC_007677.1 hypothetical protein 2430753 3851400 SRU_1964 Salinibacter ruber DSM 13855 hypothetical protein YP_446074.1 2430295 D 309807 CDS YP_446075.1 83815473 3853067 complement(2430771..2431121) 1 NC_007677.1 hypothetical protein 2431121 3853067 SRU_1965 Salinibacter ruber DSM 13855 hypothetical protein YP_446075.1 2430771 R 309807 CDS YP_446076.1 83816643 3852097 complement(2431242..2433143) 1 NC_007677.1 identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase subunit beta 2433143 3852097 SRU_1966 Salinibacter ruber DSM 13855 pyruvate dehydrogenase subunit beta YP_446076.1 2431242 R 309807 CDS YP_446077.1 83815214 3852295 complement(2433337..2434050) 1 NC_007677.1 identified by match to protein family HMM TIGR01352; TonB family protein 2434050 3852295 SRU_1967 Salinibacter ruber DSM 13855 TonB family protein YP_446077.1 2433337 R 309807 CDS YP_446078.1 83815871 3852529 complement(2434170..2434973) 1 NC_007677.1 identified by match to protein family HMM PF00149; transcriptional regulator, Icc-like protein 2434973 3852529 SRU_1968 Salinibacter ruber DSM 13855 transcriptional regulator, Icc-like protein YP_446078.1 2434170 R 309807 CDS YP_446079.1 83816509 3851983 complement(2435007..2436404) 1 NC_007677.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase 2436404 3851983 SRU_1969 Salinibacter ruber DSM 13855 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase YP_446079.1 2435007 R 309807 CDS YP_446080.1 83814148 3850941 complement(2436500..2437483) 1 NC_007677.1 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta 2437483 3850941 SRU_1970 Salinibacter ruber DSM 13855 pyruvate dehydrogenase E1 component subunit beta YP_446080.1 2436500 R 309807 CDS YP_446081.1 83814824 3852390 complement(2437579..2438991) 1 NC_007677.1 identified by similarity to SP:Q9R9N5; match to protein family HMM PF00676; pyruvate dehydrogenase E1 component subunit alpha 2438991 3852390 SRU_1971 Salinibacter ruber DSM 13855 pyruvate dehydrogenase E1 component subunit alpha YP_446081.1 2437579 R 309807 CDS YP_446082.1 83815703 3850610 2439217..2440098 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 2440098 3850610 SRU_1972 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_446082.1 2439217 D 309807 CDS YP_446083.1 83816217 3851830 2440244..2441479 1 NC_007677.1 identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183; isocitrate dehydrogenase 2441479 icd 3851830 icd Salinibacter ruber DSM 13855 isocitrate dehydrogenase YP_446083.1 2440244 D 309807 CDS YP_446084.1 83814157 3850480 2441539..2442234 1 NC_007677.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 2442234 3850480 SRU_1974 Salinibacter ruber DSM 13855 NUDIX family hydrolase YP_446084.1 2441539 D 309807 CDS YP_446085.1 83814591 3851071 complement(2442244..2443482) 1 NC_007677.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein 2443482 3851071 SRU_1975 Salinibacter ruber DSM 13855 pyridine nucleotide-disulfide oxidoreductase family protein YP_446085.1 2442244 R 309807 CDS YP_446086.1 83815378 3850890 complement(2443562..2443846) 1 NC_007677.1 hypothetical protein 2443846 3850890 SRU_1976 Salinibacter ruber DSM 13855 hypothetical protein YP_446086.1 2443562 R 309807 CDS YP_446087.1 83814989 3851198 2443976..2444614 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2444614 3851198 SRU_1977 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_446087.1 2443976 D 309807 CDS YP_446088.1 83815595 3850776 2444664..2446076 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane efflux family protein 2446076 3850776 SRU_1978 Salinibacter ruber DSM 13855 outer membrane efflux family protein YP_446088.1 2444664 D 309807 CDS YP_446089.1 83816247 3852910 2446098..2447219 1 NC_007677.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; acriflavin resistance protein AcrE 2447219 3852910 SRU_1979 Salinibacter ruber DSM 13855 acriflavin resistance protein AcrE YP_446089.1 2446098 D 309807 CDS YP_446090.1 83814731 3851485 2447266..2450511 1 NC_007677.1 identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family transporter 2450511 3851485 SRU_1980 Salinibacter ruber DSM 13855 AcrB/AcrD/AcrF family transporter YP_446090.1 2447266 D 309807 CDS YP_446091.1 83815351 3853198 2450815..2451141 1 NC_007677.1 hypothetical protein 2451141 3853198 SRU_1981 Salinibacter ruber DSM 13855 hypothetical protein YP_446091.1 2450815 D 309807 CDS YP_446092.1 83815965 3852702 complement(2451468..2452082) 1 NC_007677.1 hypothetical protein 2452082 3852702 SRU_1982 Salinibacter ruber DSM 13855 hypothetical protein YP_446092.1 2451468 R 309807 CDS YP_446093.1 83814373 3851244 complement(2452096..2452725) 1 NC_007677.1 SAM-dependent methyltransferase 2452725 3851244 SRU_1983 Salinibacter ruber DSM 13855 SAM-dependent methyltransferase YP_446093.1 2452096 R 309807 CDS YP_446094.1 83815018 3852430 complement(2452764..2453753) 1 NC_007677.1 hypothetical protein 2453753 3852430 SRU_1984 Salinibacter ruber DSM 13855 hypothetical protein YP_446094.1 2452764 R 309807 CDS YP_446095.1 83815565 3852238 2453804..2454838 1 NC_007677.1 identified by match to protein family HMM PF00582; universal stress protein 2454838 3852238 SRU_1985 Salinibacter ruber DSM 13855 universal stress protein YP_446095.1 2453804 D 309807 CDS YP_446096.1 83815514 3852324 2454944..2455867 1 NC_007677.1 identified by match to protein family HMM PF01676; metalloenzyme superfamily protein 2455867 3852324 SRU_1986 Salinibacter ruber DSM 13855 metalloenzyme superfamily protein YP_446096.1 2454944 D 309807 CDS YP_446097.1 83816368 3851864 complement(2455872..2458097) 1 NC_007677.1 hypothetical protein 2458097 3851864 SRU_1987 Salinibacter ruber DSM 13855 hypothetical protein YP_446097.1 2455872 R 309807 CDS YP_446098.1 83814519 3852456 complement(2458153..2460096) 1 NC_007677.1 hypothetical protein 2460096 3852456 SRU_1988 Salinibacter ruber DSM 13855 hypothetical protein YP_446098.1 2458153 R 309807 CDS YP_446099.1 83814452 3852193 complement(2460591..2461103) 1 NC_007677.1 hypothetical protein 2461103 3852193 SRU_1990 Salinibacter ruber DSM 13855 hypothetical protein YP_446099.1 2460591 R 309807 CDS YP_446100.1 83815147 3850381 2461319..2462098 1 NC_007677.1 hypothetical protein 2462098 3850381 SRU_1991 Salinibacter ruber DSM 13855 hypothetical protein YP_446100.1 2461319 D 309807 CDS YP_446101.1 83814813 3852418 complement(2462171..2462647) 1 NC_007677.1 identified by match to protein family HMM TIGR00229; light- and oxygen-sensing histidine kinase 2462647 3852418 SRU_1992 Salinibacter ruber DSM 13855 light- and oxygen-sensing histidine kinase YP_446101.1 2462171 R 309807 CDS YP_446102.1 83816706 3850823 2462842..2463333 1 NC_007677.1 hypothetical protein 2463333 3850823 SRU_1993 Salinibacter ruber DSM 13855 hypothetical protein YP_446102.1 2462842 D 309807 CDS YP_446103.1 83816414 3851754 complement(2463396..2463740) 1 NC_007677.1 hypothetical protein 2463740 3851754 SRU_1994 Salinibacter ruber DSM 13855 hypothetical protein YP_446103.1 2463396 R 309807 CDS YP_446104.1 83814184 3850861 2464166..2467654 1 NC_007677.1 identified by match to protein family HMM PF00136; match to protein family HMM PF03104; match to protein family HMM TIGR01445; DNA polymerase II 2467654 3850861 SRU_1995 Salinibacter ruber DSM 13855 DNA polymerase II YP_446104.1 2464166 D 309807 CDS YP_446105.1 83814186 3850863 2467756..2469786 1 NC_007677.1 identified by similarity to GB:AAS13188.1; hypothetical protein 2469786 3850863 SRU_1996 Salinibacter ruber DSM 13855 hypothetical protein YP_446105.1 2467756 D 309807 CDS YP_446106.1 83815339 3852129 2469993..2470184 1 NC_007677.1 hypothetical protein 2470184 3852129 SRU_1997 Salinibacter ruber DSM 13855 hypothetical protein YP_446106.1 2469993 D 309807 CDS YP_446107.1 83815641 3850704 2470577..2472079 1 NC_007677.1 identified by match to protein family HMM PF00474; pantothenate permease 2472079 panF 3850704 panF Salinibacter ruber DSM 13855 pantothenate permease YP_446107.1 2470577 D 309807 CDS YP_446108.1 83816482 3852851 2472096..2473160 1 NC_007677.1 hypothetical protein 2473160 3852851 SRU_1999 Salinibacter ruber DSM 13855 hypothetical protein YP_446108.1 2472096 D 309807 CDS YP_446109.1 83815780 3852163 complement(2473283..2473828) 1 NC_007677.1 identified by match to protein family HMM PF00719; inorganic pyrophosphatase 2473828 ppa 3852163 ppa Salinibacter ruber DSM 13855 inorganic pyrophosphatase YP_446109.1 2473283 R 309807 CDS YP_446110.1 83816410 3851750 complement(2474101..2474769) 1 NC_007677.1 hypothetical protein 2474769 3851750 SRU_2001 Salinibacter ruber DSM 13855 hypothetical protein YP_446110.1 2474101 R 309807 CDS YP_446111.1 83814256 3852485 complement(2474884..2475870) 1 NC_007677.1 hypothetical protein 2475870 3852485 SRU_2002 Salinibacter ruber DSM 13855 hypothetical protein YP_446111.1 2474884 R 309807 CDS YP_446112.1 83815054 3851283 complement(2476043..2476894) 1 NC_007677.1 identified by match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 2476894 3851283 SRU_2003 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein YP_446112.1 2476043 R 309807 CDS YP_446113.1 83814897 3852346 complement(2477030..2477830) 1 NC_007677.1 identified by match to protein family HMM PF04313; Type I restriction enzyme R protein N terminus (HSDR_N) 2477830 3852346 SRU_2004 Salinibacter ruber DSM 13855 Type I restriction enzyme R protein N terminus (HSDR_N) YP_446113.1 2477030 R 309807 CDS YP_446114.1 83815681 3851018 complement(2478047..2479159) 1 NC_007677.1 identified by match to protein family HMM PF00756; esterase superfamily protein 2479159 3851018 SRU_2005 Salinibacter ruber DSM 13855 esterase superfamily protein YP_446114.1 2478047 R 309807 CDS YP_446115.1 83814629 3851442 complement(2479205..2482777) 1 NC_007677.1 hypothetical protein 2482777 3851442 SRU_2006 Salinibacter ruber DSM 13855 hypothetical protein YP_446115.1 2479205 R 309807 CDS YP_446116.1 83814209 3850650 complement(2482774..2484081) 1 NC_007677.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 2484081 3850650 SRU_2007 Salinibacter ruber DSM 13855 Ser/Thr protein phosphatase family protein YP_446116.1 2482774 R 309807 CDS YP_446117.1 83815891 3851580 2484929..2488555 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase/response regulator 2488555 3851580 SRU_2008 Salinibacter ruber DSM 13855 sensory box histidine kinase/response regulator YP_446117.1 2484929 D 309807 CDS YP_446118.1 83815298 3850964 complement(2488784..2489155) 1 NC_007677.1 hypothetical protein 2489155 3850964 SRU_2009 Salinibacter ruber DSM 13855 hypothetical protein YP_446118.1 2488784 R 309807 CDS YP_446119.1 83816388 3851728 complement(2489216..2489737) 1 NC_007677.1 transposase, orfB 2489737 3851728 SRU_2010 Salinibacter ruber DSM 13855 transposase, orfB YP_446119.1 2489216 R 309807 CDS YP_446120.1 83815757 3852765 complement(2489797..2490267) 1 NC_007677.1 transposase, orfA 2490267 3852765 SRU_2011 Salinibacter ruber DSM 13855 transposase, orfA YP_446120.1 2489797 R 309807 CDS YP_446121.1 83814791 3850883 complement(2490315..2491451) 1 NC_007677.1 hypothetical protein 2491451 3850883 SRU_2012 Salinibacter ruber DSM 13855 hypothetical protein YP_446121.1 2490315 R 309807 CDS YP_446122.1 83814087 3850410 2491836..2492114 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2492114 3850410 SRU_2013 Salinibacter ruber DSM 13855 ISSru2, transposase insA YP_446122.1 2491836 D 309807 CDS YP_446123.1 83816150 3850552 2493035..2496055 1 NC_007677.1 hypothetical protein 2496055 3850552 SRU_2015 Salinibacter ruber DSM 13855 hypothetical protein YP_446123.1 2493035 D 309807 CDS YP_446124.1 83816064 3853174 complement(2496734..2497102) 1 NC_007677.1 hypothetical protein 2497102 3853174 SRU_2016 Salinibacter ruber DSM 13855 hypothetical protein YP_446124.1 2496734 R 309807 CDS YP_446125.1 83815418 3852267 complement(2497106..2498404) 1 NC_007677.1 hypothetical protein 2498404 3852267 SRU_2017 Salinibacter ruber DSM 13855 hypothetical protein YP_446125.1 2497106 R 309807 CDS YP_446126.1 83816228 3851841 complement(2498447..2499310) 1 NC_007677.1 hypothetical protein 2499310 3851841 SRU_2018 Salinibacter ruber DSM 13855 hypothetical protein YP_446126.1 2498447 R 309807 CDS YP_446127.1 83815632 3850695 complement(2499447..2500505) 1 NC_007677.1 identified by match to protein family HMM PF04274; tagatose 1,6-diphosphate aldolase 2500505 lacD 3850695 lacD Salinibacter ruber DSM 13855 tagatose 1,6-diphosphate aldolase YP_446127.1 2499447 R 309807 CDS YP_446128.1 83815582 3850763 complement(2501129..2501515) 1 NC_007677.1 identified by match to protein family HMM PF03703; membrane flanked domain-containing protein 2501515 3850763 SRU_2020 Salinibacter ruber DSM 13855 membrane flanked domain-containing protein YP_446128.1 2501129 R 309807 CDS YP_446129.1 83814957 3851263 complement(2502093..2502263) 1 NC_007677.1 hypothetical protein 2502263 3851263 SRU_2021 Salinibacter ruber DSM 13855 hypothetical protein YP_446129.1 2502093 R 309807 CDS YP_446130.1 83814335 3851382 complement(2502493..2503164) 1 NC_007677.1 identified by match to protein family HMM PF00719; inorganic pyrophosphatase 2503164 ppa 3851382 ppa Salinibacter ruber DSM 13855 inorganic pyrophosphatase YP_446130.1 2502493 R 309807 CDS YP_446131.1 83816604 3853134 2504117..2504395 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 2504395 3853134 SRU_2023 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_446131.1 2504117 D 309807 CDS YP_446132.1 83815818 3851624 2504359..2504835 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 2504835 3851624 SRU_2024 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_446132.1 2504359 D 309807 CDS YP_446133.1 83815046 3852635 2504947..2507931 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782; TonB-dependent receptor 2507931 3852635 SRU_2025 Salinibacter ruber DSM 13855 TonB-dependent receptor YP_446133.1 2504947 D 309807 CDS YP_446134.1 83815954 3850452 2508041..2509819 1 NC_007677.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 2509819 3850452 SRU_2026 Salinibacter ruber DSM 13855 Ser/Thr protein phosphatase family protein YP_446134.1 2508041 D 309807 CDS YP_446135.1 83815216 3852297 2509961..2511733 1 NC_007677.1 hypothetical protein 2511733 3852297 SRU_2027 Salinibacter ruber DSM 13855 hypothetical protein YP_446135.1 2509961 D 309807 CDS YP_446136.1 83816181 3851560 complement(2511914..2512948) 1 NC_007677.1 identified by match to protein family HMM PF01699; cation transporter 2512948 3851560 SRU_2028 Salinibacter ruber DSM 13855 cation transporter YP_446136.1 2511914 R 309807 CDS YP_446137.1 83815549 3852222 2513688..2514665 1 NC_007677.1 hypothetical protein 2514665 3852222 SRU_2029 Salinibacter ruber DSM 13855 hypothetical protein YP_446137.1 2513688 D 309807 CDS YP_446138.1 83814546 3850794 2514824..2515249 1 NC_007677.1 hypothetical protein 2515249 3850794 SRU_2030 Salinibacter ruber DSM 13855 hypothetical protein YP_446138.1 2514824 D 309807 CDS YP_446139.1 83816423 3851763 2515334..2516173 1 NC_007677.1 hypothetical protein 2516173 3851763 SRU_2031 Salinibacter ruber DSM 13855 hypothetical protein YP_446139.1 2515334 D 309807 CDS YP_446140.1 83816089 3850569 2516747..2517133 1 NC_007677.1 hypothetical protein 2517133 3850569 SRU_2032 Salinibacter ruber DSM 13855 hypothetical protein YP_446140.1 2516747 D 309807 CDS YP_446141.1 83814217 3850462 2517751..2519823 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF07676; acyl-peptide hydrolase 2519823 3850462 SRU_2034 Salinibacter ruber DSM 13855 acyl-peptide hydrolase YP_446141.1 2517751 D 309807 CDS YP_446142.1 83814739 3851357 2520369..2520956 1 NC_007677.1 identified by match to protein family HMM PF02469; fasciclin domain-containing protein 2520956 3851357 SRU_2036 Salinibacter ruber DSM 13855 fasciclin domain-containing protein YP_446142.1 2520369 D 309807 CDS YP_446143.1 83816569 3851913 2521074..2521832 1 NC_007677.1 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 2521832 3851913 SRU_2037 Salinibacter ruber DSM 13855 short chain dehydrogenase/reductase family oxidoreductase YP_446143.1 2521074 D 309807 CDS YP_446144.1 83816493 3852862 2521943..2523487 1 NC_007677.1 identified by match to protein family HMM PF04244; deoxyribodipyrimidine photolyase-like protein 2523487 3852862 SRU_2038 Salinibacter ruber DSM 13855 deoxyribodipyrimidine photolyase-like protein YP_446144.1 2521943 D 309807 CDS YP_446145.1 83815753 3852761 2523867..2524820 1 NC_007677.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; cysteine synthase B 2524820 3852761 SRU_2039 Salinibacter ruber DSM 13855 cysteine synthase B YP_446145.1 2523867 D 309807 CDS YP_446146.1 83814538 3852613 2524966..2525403 1 NC_007677.1 identified by match to protein family HMM PF01398; Mov34/MPN/PAD-1 family protein 2525403 3852613 SRU_2040 Salinibacter ruber DSM 13855 Mov34/MPN/PAD-1 family protein YP_446146.1 2524966 D 309807 CDS YP_446147.1 83816286 3852048 2525463..2525756 1 NC_007677.1 identified by match to protein family HMM PF02597; ThiS family protein 2525756 3852048 SRU_2041 Salinibacter ruber DSM 13855 ThiS family protein YP_446147.1 2525463 D 309807 CDS YP_446148.1 83815308 3852137 2525937..2527154 1 NC_007677.1 identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237; MoeZ/MoeB domain-contain protein 2527154 3852137 SRU_2042 Salinibacter ruber DSM 13855 MoeZ/MoeB domain-contain protein YP_446148.1 2525937 D 309807 CDS YP_446149.1 83815082 3852378 complement(2527280..2527714) 1 NC_007677.1 hypothetical protein 2527714 3852378 SRU_2043 Salinibacter ruber DSM 13855 hypothetical protein YP_446149.1 2527280 R 309807 CDS YP_446150.1 83814107 3850920 complement(2528211..2530916) 1 NC_007677.1 identified by match to protein family HMM PF00133; match to protein family HMM TIGR00422; valyl-tRNA synthetase 2530916 valS 3850920 valS Salinibacter ruber DSM 13855 valyl-tRNA synthetase YP_446150.1 2528211 R 309807 CDS YP_446151.1 83816669 3852670 2531186..2531839 1 NC_007677.1 identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron dependent repressor 2531839 3852670 SRU_2045 Salinibacter ruber DSM 13855 iron dependent repressor YP_446151.1 2531186 D 309807 CDS YP_446152.1 83815706 3850613 2531858..2533378 1 NC_007677.1 hypothetical protein 2533378 3850613 SRU_2046 Salinibacter ruber DSM 13855 hypothetical protein YP_446152.1 2531858 D 309807 CDS YP_446153.1 83816255 3852918 complement(2533391..2533813) 1 NC_007677.1 hypothetical protein 2533813 3852918 SRU_2047 Salinibacter ruber DSM 13855 hypothetical protein YP_446153.1 2533391 R 309807 CDS YP_446154.1 83814809 3852414 complement(2533847..2536675) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component system sensory/regulatory protein 2536675 3852414 SRU_2048 Salinibacter ruber DSM 13855 two-component system sensory/regulatory protein YP_446154.1 2533847 R 309807 CDS YP_446155.1 83814203 3850644 complement(2537129..2537884) 1 NC_007677.1 hypothetical protein 2537884 3850644 SRU_2049 Salinibacter ruber DSM 13855 hypothetical protein YP_446155.1 2537129 R 309807 CDS YP_446156.1 83816405 3851745 complement(2538153..2538356) 1 NC_007677.1 hypothetical protein 2538356 3851745 SRU_2050 Salinibacter ruber DSM 13855 hypothetical protein YP_446156.1 2538153 R 309807 CDS YP_446157.1 83815769 3852152 complement(2538506..2539006) 1 NC_007677.1 hypothetical protein 2539006 3852152 SRU_2051 Salinibacter ruber DSM 13855 hypothetical protein YP_446157.1 2538506 R 309807 CDS YP_446158.1 83815915 3851605 complement(2539014..2540297) 1 NC_007677.1 hypothetical protein 2540297 3851605 SRU_2052 Salinibacter ruber DSM 13855 hypothetical protein YP_446158.1 2539014 R 309807 CDS YP_446159.1 83816350 3851846 2541096..2541716 1 NC_007677.1 hypothetical protein 2541716 3851846 SRU_2053 Salinibacter ruber DSM 13855 hypothetical protein YP_446159.1 2541096 D 309807 CDS YP_446160.1 83814326 3851529 complement(2541809..2542618) 1 NC_007677.1 identified by match to protein family HMM PF00903; glyoxalase family protein 2542618 3851529 SRU_2054 Salinibacter ruber DSM 13855 glyoxalase family protein YP_446160.1 2541809 R 309807 CDS YP_446161.1 83814773 3851703 complement(2542705..2543331) 1 NC_007677.1 hypothetical protein 2543331 3851703 SRU_2055 Salinibacter ruber DSM 13855 hypothetical protein YP_446161.1 2542705 R 309807 CDS YP_446162.1 83814899 3852348 complement(2543446..2543802) 1 NC_007677.1 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 2543802 3852348 SRU_2056 Salinibacter ruber DSM 13855 nitrogen regulatory protein P-II YP_446162.1 2543446 R 309807 CDS YP_446163.1 83815312 3852141 complement(2543854..2546307) 1 NC_007677.1 hypothetical protein 2546307 3852141 SRU_2057 Salinibacter ruber DSM 13855 hypothetical protein YP_446163.1 2543854 R 309807 CDS YP_446164.1 83814528 3852603 complement(2546297..2547736) 1 NC_007677.1 identified by match to protein family HMM PF00361; NADH dehydrogenase 2547736 3852603 SRU_2058 Salinibacter ruber DSM 13855 NADH dehydrogenase YP_446164.1 2546297 R 309807 CDS YP_446165.1 83815741 3852749 complement(2548540..2549310) 1 NC_007677.1 identified by match to protein family HMM PF00226; DnaJ domain-containing protein 2549310 3852749 SRU_2059 Salinibacter ruber DSM 13855 DnaJ domain-containing protein YP_446165.1 2548540 R 309807 CDS YP_446166.1 83814960 3851266 complement(2549320..2550930) 1 NC_007677.1 identified by match to protein family HMM PF01266; match to protein family HMM PF01593; phytoene dehydrogenase 2550930 crtI 3851266 crtI Salinibacter ruber DSM 13855 phytoene dehydrogenase YP_446166.1 2549320 R 309807 CDS YP_446167.1 83814841 3852778 complement(2551069..2551872) 1 NC_007677.1 hypothetical protein 2551872 3852778 SRU_2061 Salinibacter ruber DSM 13855 hypothetical protein YP_446167.1 2551069 R 309807 CDS YP_446168.1 83814249 3852597 complement(2552102..2554819) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kianse/response regulator 2554819 3852597 SRU_2062 Salinibacter ruber DSM 13855 sensory box sensor histidine kianse/response regulator YP_446168.1 2552102 R 309807 CDS YP_446169.1 83816788 3851216 complement(2555036..2556250) 1 NC_007677.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2556250 aroC 3851216 aroC Salinibacter ruber DSM 13855 chorismate synthase YP_446169.1 2555036 R 309807 CDS YP_446170.1 83815454 3850751 complement(2556331..2557875) 1 NC_007677.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease degQ 2557875 3850751 SRU_2064 Salinibacter ruber DSM 13855 protease degQ YP_446170.1 2556331 R 309807 CDS YP_446171.1 83816000 3851652 complement(2558088..2561318) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07495; two-component system sensor histidine kinase/response regulator, hybrid 2561318 3851652 SRU_2065 Salinibacter ruber DSM 13855 two-component system sensor histidine kinase/response regulator, hybrid YP_446171.1 2558088 R 309807 CDS YP_446172.1 83816178 3851557 2562003..2562926 1 NC_007677.1 identified by match to protein family HMM PF00850; histone deacetylase/AcuC/AphA family protein 2562926 3851557 SRU_2067 Salinibacter ruber DSM 13855 histone deacetylase/AcuC/AphA family protein YP_446172.1 2562003 D 309807 CDS YP_446173.1 83816659 3852660 complement(2562919..2563830) 1 NC_007677.1 identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; hemK protein 2563830 hemK 3852660 hemK Salinibacter ruber DSM 13855 hemK protein YP_446173.1 2562919 R 309807 CDS YP_446174.1 83815370 3850666 complement(2563869..2564156) 1 NC_007677.1 identified by match to protein family HMM PF00708; acylphosphatase 2564156 3850666 SRU_2068 Salinibacter ruber DSM 13855 acylphosphatase YP_446174.1 2563869 R 309807 CDS YP_446175.1 83814970 3851276 complement(2564321..2565157) 1 NC_007677.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 2565157 phhA 3851276 phhA Salinibacter ruber DSM 13855 phenylalanine 4-monooxygenase YP_446175.1 2564321 R 309807 CDS YP_446176.1 83814356 3851344 complement(2565341..2565553) 1 NC_007677.1 ABC transporter permease 2565553 3851344 SRU_2070 Salinibacter ruber DSM 13855 ABC transporter permease YP_446176.1 2565341 R 309807 CDS YP_446177.1 83816619 3852073 complement(2565633..2566232) 1 NC_007677.1 hypothetical protein 2566232 3852073 SRU_2071 Salinibacter ruber DSM 13855 hypothetical protein YP_446177.1 2565633 R 309807 CDS YP_446178.1 83815993 3852730 complement(2566376..2566963) 1 NC_007677.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase 2566963 nadD 3852730 nadD Salinibacter ruber DSM 13855 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_446178.1 2566376 R 309807 CDS YP_446179.1 83815586 3850767 complement(2566993..2567847) 1 NC_007677.1 hypothetical protein 2567847 3850767 SRU_2073 Salinibacter ruber DSM 13855 hypothetical protein YP_446179.1 2566993 R 309807 CDS YP_446180.1 83814577 3852966 complement(2568015..2569709) 1 NC_007677.1 hypothetical protein 2569709 3852966 SRU_2074 Salinibacter ruber DSM 13855 hypothetical protein YP_446180.1 2568015 R 309807 CDS YP_446181.1 83814385 3851256 complement(2569790..2571370) 1 NC_007677.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2571370 guaA 3851256 guaA Salinibacter ruber DSM 13855 GMP synthase YP_446181.1 2569790 R 309807 CDS YP_446182.1 83814137 3850930 complement(2571488..2571862) 1 NC_007677.1 identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein 2571862 gcvH 3850930 gcvH Salinibacter ruber DSM 13855 glycine cleavage system H protein YP_446182.1 2571488 R 309807 CDS YP_446183.1 83816325 3851952 complement(2572023..2572517) 1 NC_007677.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 2572517 coaD 3851952 coaD Salinibacter ruber DSM 13855 pantetheine-phosphate adenylyltransferase YP_446183.1 2572023 R 309807 CDS YP_446184.1 83816067 3853177 complement(2572552..2573166) 1 NC_007677.1 identified by match to protein family HMM PF01170; match to protein family HMM PF03602; hypothetical protein 2573166 3853177 SRU_2078 Salinibacter ruber DSM 13855 hypothetical protein YP_446184.1 2572552 R 309807 CDS YP_446185.1 83815446 3850743 complement(2573315..2574283) 1 NC_007677.1 hypothetical protein 2574283 3850743 SRU_2079 Salinibacter ruber DSM 13855 hypothetical protein YP_446185.1 2573315 R 309807 CDS YP_446186.1 83814473 3851792 2575007..2575738 1 NC_007677.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2575738 pdxJ 3851792 pdxJ Salinibacter ruber DSM 13855 pyridoxine 5'-phosphate synthase YP_446186.1 2575007 D 309807 CDS YP_446187.1 83815627 3850690 2575776..2576690 1 NC_007677.1 identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650; GTP-binding protein Era 2576690 era 3850690 era Salinibacter ruber DSM 13855 GTP-binding protein Era YP_446187.1 2575776 D 309807 CDS YP_446188.1 83814647 3851421 complement(2576703..2577881) 1 NC_007677.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; erythronate-4-phosphate dehydrogenase 2577881 pdxB 3851421 pdxB Salinibacter ruber DSM 13855 erythronate-4-phosphate dehydrogenase YP_446188.1 2576703 R 309807 CDS YP_446189.1 83814075 3852479 2578228..2578959 1 NC_007677.1 hypothetical protein 2578959 3852479 SRU_2083 Salinibacter ruber DSM 13855 hypothetical protein YP_446189.1 2578228 D 309807 CDS YP_446190.1 83816257 3852920 complement(2579052..2579693) 1 NC_007677.1 hypothetical protein 2579693 3852920 SRU_2084 Salinibacter ruber DSM 13855 hypothetical protein YP_446190.1 2579052 R 309807 CDS YP_446191.1 83815953 3850451 2580063..2581211 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 2581211 3850451 SRU_2085 Salinibacter ruber DSM 13855 glycoside hydrolase YP_446191.1 2580063 D 309807 CDS YP_446192.1 83814910 3852359 complement(2581222..2581872) 1 NC_007677.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2581872 3852359 SRU_2086 Salinibacter ruber DSM 13855 metallo-beta-lactamase family protein YP_446192.1 2581222 R 309807 CDS YP_446193.1 83816098 3850578 2582046..2583467 1 NC_007677.1 identified by match to protein family HMM PF03739; hypothetical protein 2583467 3850578 SRU_2087 Salinibacter ruber DSM 13855 hypothetical protein YP_446193.1 2582046 D 309807 CDS YP_446194.1 83816757 3852564 2583516..2584184 1 NC_007677.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 2584184 3852564 SRU_2088 Salinibacter ruber DSM 13855 tetrapyrrole methylase family protein YP_446194.1 2583516 D 309807 CDS YP_446195.1 83814554 3850802 2584366..2584905 1 NC_007677.1 hypothetical protein 2584905 3850802 SRU_2089 Salinibacter ruber DSM 13855 hypothetical protein YP_446195.1 2584366 D 309807 CDS YP_446196.1 83815208 3852289 2584988..2587924 1 NC_007677.1 hypothetical protein 2587924 3852289 SRU_2090 Salinibacter ruber DSM 13855 hypothetical protein YP_446196.1 2584988 D 309807 CDS YP_446197.1 83814543 3852618 2588205..2588537 1 NC_007677.1 identified by match to protein family HMM PF00313; hypothetical protein 2588537 cspa 3852618 cspa Salinibacter ruber DSM 13855 hypothetical protein YP_446197.1 2588205 D 309807 CDS YP_446198.1 83816771 3852578 2588577..2589050 1 NC_007677.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 2589050 3852578 SRU_2092 Salinibacter ruber DSM 13855 hypothetical protein YP_446198.1 2588577 D 309807 CDS YP_446199.1 83814708 3851501 2589151..2589549 1 NC_007677.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 2589549 yfiA 3851501 yfiA Salinibacter ruber DSM 13855 ribosomal subunit interface protein YP_446199.1 2589151 D 309807 CDS YP_446200.1 83814829 3852395 complement(2589658..2590617) 1 NC_007677.1 identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 2590617 metF 3852395 metF Salinibacter ruber DSM 13855 5,10-methylenetetrahydrofolate reductase YP_446200.1 2589658 R 309807 CDS YP_446201.1 83815620 3850683 2590710..2591321 1 NC_007677.1 bifunctional 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 2591321 3850683 SRU_2095 Salinibacter ruber DSM 13855 bifunctional 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase YP_446201.1 2590710 D 309807 CDS YP_446202.1 83816076 3850556 complement(2591341..2591706) 1 NC_007677.1 hypothetical protein 2591706 3850556 SRU_2096 Salinibacter ruber DSM 13855 hypothetical protein YP_446202.1 2591341 R 309807 CDS YP_446203.1 83815460 3853054 complement(2591793..2592242) 1 NC_007677.1 identified by match to protein family HMM TIGR02229; CAA(3)-type oxidase subunit IV 2592242 3853054 SRU_2097 Salinibacter ruber DSM 13855 CAA(3)-type oxidase subunit IV YP_446203.1 2591793 R 309807 CDS YP_446204.1 83816284 3852046 complement(2592309..2593010) 1 NC_007677.1 hypothetical protein 2593010 3852046 SRU_2098 Salinibacter ruber DSM 13855 hypothetical protein YP_446204.1 2592309 R 309807 CDS YP_446205.1 83815235 3851036 complement(2593052..2594797) 1 NC_007677.1 identified by similarity to GB:CAC08532.1; match to protein family HMM PF00115; cytochrome oxidase subunit I 2594797 coxA1 3851036 coxA1 Salinibacter ruber DSM 13855 cytochrome oxidase subunit I YP_446205.1 2593052 R 309807 CDS YP_446206.1 83815003 3853042 complement(2594880..2595827) 1 NC_007677.1 identified by match to protein family HMM PF00034; match to protein family HMM PF00116; cytochrome oxidase subunit II 2595827 coxB1 3853042 coxB1 Salinibacter ruber DSM 13855 cytochrome oxidase subunit II YP_446206.1 2594880 R 309807 CDS YP_446207.1 83814536 3852611 complement(2595939..2596682) 1 NC_007677.1 hypothetical protein 2596682 3852611 SRU_2101 Salinibacter ruber DSM 13855 hypothetical protein YP_446207.1 2595939 R 309807 CDS YP_446208.1 83816010 3851662 complement(2596818..2597957) 1 NC_007677.1 molybdopterin oxidoreductase membrane subunit 2597957 3851662 SRU_2102 Salinibacter ruber DSM 13855 molybdopterin oxidoreductase membrane subunit YP_446208.1 2596818 R 309807 CDS YP_446209.1 83816437 3852804 complement(2598178..2598882) 1 NC_007677.1 hypothetical protein 2598882 3852804 SRU_2103 Salinibacter ruber DSM 13855 hypothetical protein YP_446209.1 2598178 R 309807 CDS YP_446210.1 83816480 3852849 complement(2598882..2599487) 1 NC_007677.1 hypothetical protein 2599487 3852849 SRU_2104 Salinibacter ruber DSM 13855 hypothetical protein YP_446210.1 2598882 R 309807 CDS YP_446211.1 83814119 3851106 complement(2599547..2600944) 1 NC_007677.1 identified by match to protein family HMM PF03916; polysulfide reductase chain C 2600944 3851106 SRU_2105 Salinibacter ruber DSM 13855 polysulfide reductase chain C YP_446211.1 2599547 R 309807 CDS YP_446212.1 83814420 3853004 complement(2601117..2604539) 1 NC_007677.1 identified by match to protein family HMM PF00037; molybdopterin oxidoreductase, iron-sulfur binding subunit 2604539 3853004 SRU_2106 Salinibacter ruber DSM 13855 molybdopterin oxidoreductase, iron-sulfur binding subunit YP_446212.1 2601117 R 309807 CDS YP_446213.1 83815361 3850657 complement(2604653..2605306) 1 NC_007677.1 hypothetical protein 2605306 3850657 SRU_2107 Salinibacter ruber DSM 13855 hypothetical protein YP_446213.1 2604653 R 309807 CDS YP_446214.1 83815684 3851021 complement(2606443..2608809) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 2608809 3851021 SRU_2108 Salinibacter ruber DSM 13855 TonB dependent receptor YP_446214.1 2606443 R 309807 CDS YP_446215.1 83816586 3853116 2609519..2610076 1 NC_007677.1 identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2610076 msrB 3853116 msrB Salinibacter ruber DSM 13855 methionine-R-sulfoxide reductase YP_446215.1 2609519 D 309807 CDS YP_446216.1 83815669 3851006 complement(2610106..2610510) 1 NC_007677.1 hypothetical protein 2610510 3851006 SRU_2110 Salinibacter ruber DSM 13855 hypothetical protein YP_446216.1 2610106 R 309807 CDS YP_446217.1 83816449 3852816 2610801..2611940 1 NC_007677.1 identified by match to protein family HMM PF00365; phosphofructokinase subfamily protein 2611940 3852816 SRU_2111 Salinibacter ruber DSM 13855 phosphofructokinase subfamily protein YP_446217.1 2610801 D 309807 CDS YP_446218.1 83814079 3850402 2611855..2613144 1 NC_007677.1 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 2613144 3850402 SRU_2112 Salinibacter ruber DSM 13855 hypothetical protein YP_446218.1 2611855 D 309807 CDS YP_446219.1 83814837 3852774 2613492..2614268 1 NC_007677.1 identified by match to protein family HMM PF02591; hypothetical protein 2614268 3852774 SRU_2113 Salinibacter ruber DSM 13855 hypothetical protein YP_446219.1 2613492 D 309807 CDS YP_446220.1 83815198 3851779 complement(2614939..2615322) 1 NC_007677.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; protein-export membrane protein 2615322 3851779 SRU_2114 Salinibacter ruber DSM 13855 protein-export membrane protein YP_446220.1 2614939 R 309807 CDS YP_446221.1 83816623 3852077 complement(2615393..2616022) 1 NC_007677.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 2616022 3852077 SRU_2115 Salinibacter ruber DSM 13855 NUDIX family hydrolase YP_446221.1 2615393 R 309807 CDS YP_446222.1 83814115 3851102 complement(2616772..2617491) 1 NC_007677.1 identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein 2617491 3851102 SRU_2116 Salinibacter ruber DSM 13855 hypothetical protein YP_446222.1 2616772 R 309807 CDS YP_446223.1 83814566 3852955 complement(2617579..2619390) 1 NC_007677.1 identified by match to protein family HMM PF01103; OMP85 family outer membrane protein 2619390 3852955 SRU_2117 Salinibacter ruber DSM 13855 OMP85 family outer membrane protein YP_446223.1 2617579 R 309807 CDS YP_446224.1 83815705 3850612 2619389..2619793 1 NC_007677.1 hypothetical protein 2619793 3850612 SRU_2118 Salinibacter ruber DSM 13855 hypothetical protein YP_446224.1 2619389 D 309807 CDS YP_446225.1 83816513 3851987 2619971..2621035 1 NC_007677.1 identified by match to protein family HMM PF00293; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 2621035 mutY 3851987 mutY Salinibacter ruber DSM 13855 A/G-specific adenine glycosylase YP_446225.1 2619971 D 309807 CDS YP_446226.1 83814793 3850885 complement(2621691..2622221) 1 NC_007677.1 hypothetical protein 2622221 3850885 SRU_2120 Salinibacter ruber DSM 13855 hypothetical protein YP_446226.1 2621691 R 309807 CDS YP_446227.1 83815796 3852179 2622459..2622749 1 NC_007677.1 identified by match to protein family HMM PF00166; chaperonin, 10 kDa 2622749 groS 3852179 groS Salinibacter ruber DSM 13855 chaperonin, 10 kDa YP_446227.1 2622459 D 309807 CDS YP_446228.1 83816742 3852549 2622845..2624527 1 NC_007677.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 2624527 groEL 3852549 groEL Salinibacter ruber DSM 13855 chaperonin GroEL YP_446228.1 2622845 D 309807 CDS YP_446229.1 83814189 3850866 complement(2624687..2627437) 1 NC_007677.1 identified by match to protein family HMM PF00583; match to protein family HMM PF02629; acetyltransferase 2627437 3850866 SRU_2123 Salinibacter ruber DSM 13855 acetyltransferase YP_446229.1 2624687 R 309807 CDS YP_446230.1 83814745 3851363 2627720..2627920 1 NC_007677.1 hypothetical protein 2627920 3851363 SRU_2124 Salinibacter ruber DSM 13855 hypothetical protein YP_446230.1 2627720 D 309807 CDS YP_446231.1 83816704 3850821 complement(2628029..2629552) 1 NC_007677.1 identified by match to protein family HMM PF01935; hypothetical protein 2629552 3850821 SRU_2125 Salinibacter ruber DSM 13855 hypothetical protein YP_446231.1 2628029 R 309807 CDS YP_446232.1 83816743 3852550 complement(2630197..2631306) 1 NC_007677.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM protein 2631306 3852550 SRU_2126 Salinibacter ruber DSM 13855 radical SAM protein YP_446232.1 2630197 R 309807 CDS YP_446233.1 83814345 3851392 2631543..2633009 1 NC_007677.1 identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069; histidinol dehydrogenase 2633009 hisD 3851392 hisD Salinibacter ruber DSM 13855 histidinol dehydrogenase YP_446233.1 2631543 D 309807 CDS YP_446234.1 83816361 3851857 2633151..2634215 1 NC_007677.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate aminotransferase 2634215 hisC 3851857 hisC Salinibacter ruber DSM 13855 histidinol-phosphate aminotransferase YP_446234.1 2633151 D 309807 CDS YP_446235.1 83816685 3852686 2634366..2634899 1 NC_007677.1 identified by match to protein family HMM PF02151; match to protein family HMM PF02577; hypothetical protein 2634899 3852686 SRU_2129 Salinibacter ruber DSM 13855 hypothetical protein YP_446235.1 2634366 D 309807 CDS YP_446236.1 83814274 3850343 2634976..2636703 1 NC_007677.1 hypothetical protein 2636703 3850343 SRU_2130 Salinibacter ruber DSM 13855 hypothetical protein YP_446236.1 2634976 D 309807 CDS YP_446237.1 83815488 3853082 2636765..2637610 1 NC_007677.1 identified by match to protein family HMM PF01966; HD domain-containing protein 2637610 3853082 SRU_2132 Salinibacter ruber DSM 13855 HD domain-containing protein YP_446237.1 2636765 D 309807 CDS YP_446238.1 83815074 3852369 complement(2637483..2638271) 1 NC_007677.1 identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; purine nucleoside phosphorylase 2638271 deoD 3852369 deoD Salinibacter ruber DSM 13855 purine nucleoside phosphorylase YP_446238.1 2637483 R 309807 CDS YP_446239.1 83815462 3853056 complement(2638446..2639687) 1 NC_007677.1 identified by match to protein family HMM PF01594; hypothetical protein 2639687 3853056 SRU_2133 Salinibacter ruber DSM 13855 hypothetical protein YP_446239.1 2638446 R 309807 CDS YP_446240.1 83815876 3852534 complement(2639760..2640428) 1 NC_007677.1 identified by match to protein family HMM PF02631; regulatory protein RecX 2640428 recX 3852534 recX Salinibacter ruber DSM 13855 regulatory protein RecX YP_446240.1 2639760 R 309807 CDS YP_446241.1 83815396 3850908 complement(2640544..2641437) 1 NC_007677.1 hypothetical protein 2641437 3850908 SRU_2135 Salinibacter ruber DSM 13855 hypothetical protein YP_446241.1 2640544 R 309807 CDS YP_446242.1 83814477 3851796 complement(2641556..2644141) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 2644141 3851796 SRU_2136 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446242.1 2641556 R 309807 CDS YP_446243.1 83816349 3851845 complement(2644331..2645533) 1 NC_007677.1 identified by match to protein family HMM PF04773; sigma factor regulatory protein FecR/PupR family 2645533 3851845 SRU_2137 Salinibacter ruber DSM 13855 sigma factor regulatory protein FecR/PupR family YP_446243.1 2644331 R 309807 CDS YP_446244.1 83814255 3852484 complement(2645672..2646226) 1 NC_007677.1 identified by match to protein family HMM PF04542; RNA polymerase sigma factor 2646226 3852484 SRU_2138 Salinibacter ruber DSM 13855 RNA polymerase sigma factor YP_446244.1 2645672 R 309807 CDS YP_446245.1 83814522 3852459 2646526..2646810 1 NC_007677.1 hypothetical protein 2646810 3852459 SRU_2139 Salinibacter ruber DSM 13855 hypothetical protein YP_446245.1 2646526 D 309807 CDS YP_446246.1 83816576 3851920 complement(2646943..2647566) 1 NC_007677.1 identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A 2647566 rlpA 3851920 rlpA Salinibacter ruber DSM 13855 rare lipoprotein A YP_446246.1 2646943 R 309807 CDS YP_446247.1 83816157 3851536 2647549..2647827 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2647827 3851536 SRU_2141 Salinibacter ruber DSM 13855 ISSru2, transposase insA YP_446247.1 2647549 D 309807 CDS YP_446248.1 83816236 3852899 2648544..2651048 1 NC_007677.1 identified by match to protein family HMM PF01578; cytochrome c biogenesis factor 2651048 3852899 SRU_2143 Salinibacter ruber DSM 13855 cytochrome c biogenesis factor YP_446248.1 2648544 D 309807 CDS YP_446249.1 83814379 3851250 2651240..2651674 1 NC_007677.1 bacterio-opsin linked protein 2651674 3851250 SRU_2144 Salinibacter ruber DSM 13855 bacterio-opsin linked protein YP_446249.1 2651240 D 309807 CDS YP_446250.1 83816240 3852903 2652438..2654228 1 NC_007677.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 2654228 ilvB 3852903 ilvB Salinibacter ruber DSM 13855 acetolactate synthase large subunit YP_446250.1 2652438 D 309807 CDS YP_446251.1 83814375 3851246 2654252..2654974 1 NC_007677.1 identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119; acetolactate synthase small subunit 2654974 3851246 SRU_2146 Salinibacter ruber DSM 13855 acetolactate synthase small subunit YP_446251.1 2654252 D 309807 CDS YP_446252.1 83814998 3853037 2655058..2656104 1 NC_007677.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2656104 ilvC 3853037 ilvC Salinibacter ruber DSM 13855 ketol-acid reductoisomerase YP_446252.1 2655058 D 309807 CDS YP_446253.1 83815974 3852711 2656040..2657278 1 NC_007677.1 identified by match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 2657278 leuB 3852711 leuB Salinibacter ruber DSM 13855 3-isopropylmalate dehydrogenase YP_446253.1 2656040 D 309807 CDS YP_446254.1 83816629 3852083 2657454..2659094 1 NC_007677.1 identified by match to protein family HMM PF00682; match to protein family HMM TIGR00973; 2-isopropylmalate synthase 2659094 leuA 3852083 leuA Salinibacter ruber DSM 13855 2-isopropylmalate synthase YP_446254.1 2657454 D 309807 CDS YP_446255.1 83814734 3851488 2659227..2660645 1 NC_007677.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2660645 leuC 3851488 leuC Salinibacter ruber DSM 13855 isopropylmalate isomerase large subunit YP_446255.1 2659227 D 309807 CDS YP_446256.1 83815543 3852216 complement(2660653..2661135) 1 NC_007677.1 hypothetical protein 2661135 3852216 SRU_2151 Salinibacter ruber DSM 13855 hypothetical protein YP_446256.1 2660653 R 309807 CDS YP_446257.1 83816177 3851556 2661190..2661807 1 NC_007677.1 identified by match to protein family HMM PF00694; match to protein family HMM TIGR00171; 3-isopropylmalate dehydratase small subunit 2661807 leuD 3851556 leuD Salinibacter ruber DSM 13855 3-isopropylmalate dehydratase small subunit YP_446257.1 2661190 D 309807 CDS YP_446258.1 83814828 3852394 2661829..2663667 1 NC_007677.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2663667 ilvD 3852394 ilvD Salinibacter ruber DSM 13855 dihydroxy-acid dehydratase YP_446258.1 2661829 D 309807 CDS YP_446259.1 83816705 3850822 2663716..2665374 1 NC_007677.1 identified by match to protein family HMM PF00682; match to protein family HMM TIGR00977; alpha-isopropylmalate/homocitrate synthase family transferase 2665374 3850822 SRU_2154 Salinibacter ruber DSM 13855 alpha-isopropylmalate/homocitrate synthase family transferase YP_446259.1 2663716 D 309807 CDS YP_446260.1 83814284 3850353 complement(2665377..2665913) 1 NC_007677.1 hypothetical protein 2665913 3850353 SRU_2155 Salinibacter ruber DSM 13855 hypothetical protein YP_446260.1 2665377 R 309807 CDS YP_446261.1 83815957 3850455 complement(2665953..2666231) 1 NC_007677.1 hypothetical protein 2666231 3850455 SRU_2156 Salinibacter ruber DSM 13855 hypothetical protein YP_446261.1 2665953 R 309807 CDS YP_446262.1 83815507 3852317 2666312..2667235 1 NC_007677.1 identified by match to protein family HMM PF00085; thioredoxin 2667235 3852317 SRU_2157 Salinibacter ruber DSM 13855 thioredoxin YP_446262.1 2666312 D 309807 CDS YP_446263.1 83815112 3852643 2667238..2667687 1 NC_007677.1 identified by match to protein family HMM PF03061; thioesterase 2667687 3852643 SRU_2158 Salinibacter ruber DSM 13855 thioesterase YP_446263.1 2667238 D 309807 CDS YP_446264.1 83816278 3852040 complement(2667689..2668813) 1 NC_007677.1 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 2668813 3852040 SRU_2159 Salinibacter ruber DSM 13855 phosphotransferase enzyme family protein YP_446264.1 2667689 R 309807 CDS YP_446265.1 83815533 3852343 complement(2668817..2669608) 1 NC_007677.1 identified by match to protein family HMM PF00896; 5'-methylthioadenosine phosphorylase 2669608 mtap 3852343 mtap Salinibacter ruber DSM 13855 5'-methylthioadenosine phosphorylase YP_446265.1 2668817 R 309807 CDS YP_446266.1 83814650 3851424 complement(2669758..2672700) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 2672700 3851424 SRU_2161 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446266.1 2669758 R 309807 CDS YP_446267.1 83816394 3851734 complement(2673062..2673667) 1 NC_007677.1 hypothetical protein 2673667 3851734 SRU_2162 Salinibacter ruber DSM 13855 hypothetical protein YP_446267.1 2673062 R 309807 CDS YP_446268.1 83815738 3852746 complement(2673945..2675867) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 2675867 3852746 SRU_2163 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446268.1 2673945 R 309807 CDS YP_446269.1 83816353 3851849 complement(2675919..2676887) 1 NC_007677.1 identified by match to protein family HMM PF00753; match to protein family HMM TIGR02651; ribonuclease Z 2676887 rnz 3851849 rnz Salinibacter ruber DSM 13855 ribonuclease Z YP_446269.1 2675919 R 309807 CDS YP_446270.1 83815718 3850625 complement(2677005..2678873) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 2678873 3850625 SRU_2165 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446270.1 2677005 R 309807 CDS YP_446271.1 83814764 3851694 complement(2679061..2679753) 1 NC_007677.1 identified by match to protein family HMM PF00027; Crp family transcriptional regulator 2679753 3851694 SRU_2166 Salinibacter ruber DSM 13855 Crp family transcriptional regulator YP_446271.1 2679061 R 309807 CDS YP_446272.1 83814176 3850853 complement(2679769..2682477) 1 NC_007677.1 identified by match to protein family HMM PF01103; OMP85 family outer membrane protein 2682477 3850853 SRU_2167 Salinibacter ruber DSM 13855 OMP85 family outer membrane protein YP_446272.1 2679769 R 309807 CDS YP_446273.1 83816783 3851211 complement(2682543..2683601) 1 NC_007677.1 identified by match to protein family HMM PF01551; peptidase 2683601 3851211 SRU_2168 Salinibacter ruber DSM 13855 peptidase YP_446273.1 2682543 R 309807 CDS YP_446274.2 161986632 3851535 complement(2683899..2684876) 1 NC_007677.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 2684876 3851535 SRU_2169 Salinibacter ruber DSM 13855 HPr kinase/phosphorylase YP_446274.2 2683899 R 309807 CDS YP_446275.1 83815179 3850374 complement(2684983..2685978) 1 NC_007677.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase 2685978 3850374 SRU_2170 Salinibacter ruber DSM 13855 ATPase YP_446275.1 2684983 R 309807 CDS YP_446276.1 83814411 3852995 complement(2686024..2686947) 1 NC_007677.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 2686947 fmt 3852995 fmt Salinibacter ruber DSM 13855 methionyl-tRNA formyltransferase YP_446276.1 2686024 R 309807 CDS YP_446277.1 83814471 3851790 complement(2687022..2687996) 1 NC_007677.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 2687996 ftsY 3851790 ftsY Salinibacter ruber DSM 13855 signal recognition particle-docking protein FtsY YP_446277.1 2687022 R 309807 CDS YP_446278.1 83814914 3852363 complement(2688041..2688643) 1 NC_007677.1 identified by match to protein family HMM PF01066; phosphatidylglycerophosphate synthase 2688643 3852363 SRU_2173 Salinibacter ruber DSM 13855 phosphatidylglycerophosphate synthase YP_446278.1 2688041 R 309807 CDS YP_446279.1 83814062 3852466 complement(2688890..2689801) 1 NC_007677.1 hypothetical protein 2689801 3852466 SRU_2174 Salinibacter ruber DSM 13855 hypothetical protein YP_446279.1 2688890 R 309807 CDS YP_446280.1 83816486 3852855 complement(2689856..2692186) 1 NC_007677.1 identified by similarity to OMNI:PINA0872; match to protein family HMM PF07715; TonB dependent receptor domain-containing protein 2692186 3852855 SRU_2175 Salinibacter ruber DSM 13855 TonB dependent receptor domain-containing protein YP_446280.1 2689856 R 309807 CDS YP_446281.1 83814495 3851717 complement(2693199..2694422) 1 NC_007677.1 identified by match to protein family HMM PF02469; fasciclin domain-containing protein 2694422 3851717 SRU_2176 Salinibacter ruber DSM 13855 fasciclin domain-containing protein YP_446281.1 2693199 R 309807 CDS YP_446282.1 83816707 3850824 complement(2694533..2696170) 1 NC_007677.1 hypothetical protein 2696170 3850824 SRU_2177 Salinibacter ruber DSM 13855 hypothetical protein YP_446282.1 2694533 R 309807 CDS YP_446283.1 83815786 3852169 complement(2696272..2699586) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2699586 3852169 SRU_2178 Salinibacter ruber DSM 13855 hypothetical protein YP_446283.1 2696272 R 309807 CDS YP_446284.1 83815168 3850363 complement(2700112..2700444) 1 NC_007677.1 identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; 6-O-methylguanine DNA methyltransferase 2700444 3850363 SRU_2179 Salinibacter ruber DSM 13855 6-O-methylguanine DNA methyltransferase YP_446284.1 2700112 R 309807 CDS YP_446285.1 83815530 3852340 complement(2700480..2702675) 1 NC_007677.1 hypothetical protein 2702675 3852340 SRU_2180 Salinibacter ruber DSM 13855 hypothetical protein YP_446285.1 2700480 R 309807 CDS YP_446286.1 83816336 3851963 complement(2703590..2705173) 1 NC_007677.1 identified by match to protein family HMM PF07980; hypothetical protein 2705173 3851963 SRU_2181 Salinibacter ruber DSM 13855 hypothetical protein YP_446286.1 2703590 R 309807 CDS YP_446287.1 83815461 3853055 complement(2705221..2708286) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2708286 3853055 SRU_2182 Salinibacter ruber DSM 13855 hypothetical protein YP_446287.1 2705221 R 309807 CDS YP_446288.1 83816306 3852068 complement(2708826..2709212) 1 NC_007677.1 identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; 6-O-methylguanine DNA methyltransferase 2709212 3852068 SRU_2183 Salinibacter ruber DSM 13855 6-O-methylguanine DNA methyltransferase YP_446288.1 2708826 R 309807 CDS YP_446289.1 83814579 3852968 2709327..2710484 1 NC_007677.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase 2710484 murB 3852968 murB Salinibacter ruber DSM 13855 UDP-N-acetylenolpyruvoylglucosamine reductase YP_446289.1 2709327 D 309807 CDS YP_446290.1 83815434 3852283 2710714..2711460 1 NC_007677.1 transposase 2711460 3852283 SRU_2185 Salinibacter ruber DSM 13855 transposase YP_446290.1 2710714 D 309807 CDS YP_446291.1 83815844 3852502 2711913..2712167 1 NC_007677.1 hypothetical protein 2712167 3852502 SRU_2186 Salinibacter ruber DSM 13855 hypothetical protein YP_446291.1 2711913 D 309807 CDS YP_446292.1 83814330 3851377 complement(2712574..2713551) 1 NC_007677.1 identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase 2713551 3851377 SRU_2187 Salinibacter ruber DSM 13855 ADP-ribosylglycohydrolase YP_446292.1 2712574 R 309807 CDS YP_446293.1 83814988 3851197 2713624..2714373 1 NC_007677.1 heme exporter, protein B 2714373 3851197 SRU_2188 Salinibacter ruber DSM 13855 heme exporter, protein B YP_446293.1 2713624 D 309807 CDS YP_446294.1 83815614 3850677 2714479..2715231 1 NC_007677.1 identified by match to protein family HMM PF01578; heme exporter protein C 2715231 3850677 SRU_2189 Salinibacter ruber DSM 13855 heme exporter protein C YP_446294.1 2714479 D 309807 CDS YP_446295.1 83814588 3851068 2715212..2715571 1 NC_007677.1 hypothetical protein 2715571 3851068 SRU_2190 Salinibacter ruber DSM 13855 hypothetical protein YP_446295.1 2715212 D 309807 CDS YP_446296.1 83816315 3851942 2715599..2716030 1 NC_007677.1 cytochrome c-type biogenesis protein CcmE 2716030 3851942 SRU_2191 Salinibacter ruber DSM 13855 cytochrome c-type biogenesis protein CcmE YP_446296.1 2715599 D 309807 CDS YP_446297.1 83814885 3851307 2716041..2716478 1 NC_007677.1 hypothetical protein 2716478 3851307 SRU_2192 Salinibacter ruber DSM 13855 hypothetical protein YP_446297.1 2716041 D 309807 CDS YP_446298.1 83814104 3850917 complement(2716523..2717941) 1 NC_007677.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter 2717941 mgtE 3850917 mgtE Salinibacter ruber DSM 13855 magnesium transporter YP_446298.1 2716523 R 309807 CDS YP_446299.1 83816376 3851872 complement(2718012..2718902) 1 NC_007677.1 identified by match to protein family HMM PF00398; match to protein family HMM PF05175; match to protein family HMM TIGR00755; dimethyladenosine transferase 2718902 ksgA 3851872 ksgA Salinibacter ruber DSM 13855 dimethyladenosine transferase YP_446299.1 2718012 R 309807 CDS YP_446300.1 83816645 3852099 complement(2718921..2720027) 1 NC_007677.1 hypothetical protein 2720027 3852099 SRU_2195 Salinibacter ruber DSM 13855 hypothetical protein YP_446300.1 2718921 R 309807 CDS YP_446301.1 83814440 3850726 complement(2720162..2721391) 1 NC_007677.1 hypothetical protein 2721391 3850726 SRU_2196 Salinibacter ruber DSM 13855 hypothetical protein YP_446301.1 2720162 R 309807 CDS YP_446302.1 83815518 3852328 complement(2721540..2722844) 1 NC_007677.1 identified by match to protein family HMM PF01820; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine--D-alanine ligase 2722844 3852328 SRU_2197 Salinibacter ruber DSM 13855 D-alanine--D-alanine ligase YP_446302.1 2721540 R 309807 CDS YP_446303.1 83816824 3851134 complement(2722917..2724209) 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; amidohydrolase 2724209 3851134 SRU_2198 Salinibacter ruber DSM 13855 amidohydrolase YP_446303.1 2722917 R 309807 CDS YP_446304.1 83814088 3850411 2724446..2727178 1 NC_007677.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 2727178 gyrA 3850411 gyrA Salinibacter ruber DSM 13855 DNA gyrase subunit A YP_446304.1 2724446 D 309807 CDS YP_446305.1 83814483 3851802 complement(2727228..2730023) 1 NC_007677.1 identified by match to protein family HMM PF00041; fibronectin type III domain-containing protein 2730023 3851802 SRU_2200 Salinibacter ruber DSM 13855 fibronectin type III domain-containing protein YP_446305.1 2727228 R 309807 CDS YP_446306.1 83815270 3851051 complement(2730287..2730952) 1 NC_007677.1 hypothetical protein 2730952 3851051 SRU_2201 Salinibacter ruber DSM 13855 hypothetical protein YP_446306.1 2730287 R 309807 CDS YP_446307.1 83814872 3851412 2731208..2732626 1 NC_007677.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phospho-sugar mutase 2732626 3851412 SRU_2202 Salinibacter ruber DSM 13855 phospho-sugar mutase YP_446307.1 2731208 D 309807 CDS YP_446308.1 83814063 3852467 2732735..2734462 1 NC_007677.1 identified by match to protein family HMM PF00657; GDSL-like lipase/acylhydrolase domain-containing protein 2734462 3852467 SRU_2203 Salinibacter ruber DSM 13855 GDSL-like lipase/acylhydrolase domain-containing protein YP_446308.1 2732735 D 309807 CDS YP_446309.1 83814840 3852777 complement(2734502..2735929) 1 NC_007677.1 identified by match to protein family HMM PF02233; NAD(P) transhydrogenase beta subunit 2735929 3852777 SRU_2204 Salinibacter ruber DSM 13855 NAD(P) transhydrogenase beta subunit YP_446309.1 2734502 R 309807 CDS YP_446310.1 83816035 3851687 complement(2736074..2736394) 1 NC_007677.1 hypothetical protein 2736394 3851687 SRU_2205 Salinibacter ruber DSM 13855 hypothetical protein YP_446310.1 2736074 R 309807 CDS YP_446311.1 83816820 3851130 complement(2736572..2737729) 1 NC_007677.1 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; NAD(P) transhydrogenase subunit alpha 2737729 3851130 SRU_2206 Salinibacter ruber DSM 13855 NAD(P) transhydrogenase subunit alpha YP_446311.1 2736572 R 309807 CDS YP_446312.1 83816346 3851973 complement(2737825..2738934) 1 NC_007677.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2738934 serC 3851973 serC Salinibacter ruber DSM 13855 phosphoserine aminotransferase YP_446312.1 2737825 R 309807 CDS YP_446313.1 83815503 3852313 complement(2739292..2739777) 1 NC_007677.1 identified by similarity to SP:O52980; match to protein family HMM PF00254; FKBP-type peptidyl-prolyl cis-trans isomerase 2739777 3852313 SRU_2208 Salinibacter ruber DSM 13855 FKBP-type peptidyl-prolyl cis-trans isomerase YP_446313.1 2739292 R 309807 CDS YP_446314.1 83814870 3851410 2740042..2740581 1 NC_007677.1 identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 2740581 3851410 SRU_2209 Salinibacter ruber DSM 13855 osteoblast specific factor 2-related protein YP_446314.1 2740042 D 309807 CDS YP_446315.1 83815266 3851047 complement(2740668..2741636) 1 NC_007677.1 hypothetical protein 2741636 3851047 SRU_2210 Salinibacter ruber DSM 13855 hypothetical protein YP_446315.1 2740668 R 309807 CDS YP_446316.1 83814448 3852189 2742074..2743429 1 NC_007677.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992; NADH dehydrogenase 2743429 ndh 3852189 ndh Salinibacter ruber DSM 13855 NADH dehydrogenase YP_446316.1 2742074 D 309807 CDS YP_446317.1 83815649 3850986 2743511..2744032 1 NC_007677.1 hypothetical protein 2744032 3850986 SRU_2212 Salinibacter ruber DSM 13855 hypothetical protein YP_446317.1 2743511 D 309807 CDS YP_446318.1 83815210 3852291 complement(2744259..2744792) 1 NC_007677.1 identified by match to protein family HMM PF05685; hypothetical protein 2744792 3852291 SRU_2213 Salinibacter ruber DSM 13855 hypothetical protein YP_446318.1 2744259 R 309807 CDS YP_446319.1 83814132 3851119 2745512..2746753 1 NC_007677.1 identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; argininosuccinate synthase 2746753 argG 3851119 argG Salinibacter ruber DSM 13855 argininosuccinate synthase YP_446319.1 2745512 D 309807 CDS YP_446320.1 83816465 3852832 2746807..2747940 1 NC_007677.1 hypothetical protein 2747940 3852832 SRU_2215 Salinibacter ruber DSM 13855 hypothetical protein YP_446320.1 2746807 D 309807 CDS YP_446321.1 83816532 3852006 2748091..2749152 1 NC_007677.1 identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850; N-acetyl-gamma-glutamyl-phosphate reductase 2749152 argC 3852006 argC Salinibacter ruber DSM 13855 N-acetyl-gamma-glutamyl-phosphate reductase YP_446321.1 2748091 D 309807 CDS YP_446322.1 83816077 3850557 2749223..2750410 1 NC_007677.1 identified by match to protein family HMM PF00202; aminotransferase 2750410 3850557 SRU_2217 Salinibacter ruber DSM 13855 aminotransferase YP_446322.1 2749223 D 309807 CDS YP_446323.1 83814628 3851441 2750481..2751539 1 NC_007677.1 catalyzes the conversion of N-acetylornithine to N-acetylcitrulline in an alternative arginine biosynthesis pathway; N-acetylornithine carbamoyltransferase 2751539 3851441 SRU_2218 Salinibacter ruber DSM 13855 N-acetylornithine carbamoyltransferase YP_446323.1 2750481 D 309807 CDS YP_446324.1 83816730 3850847 2751673..2752476 1 NC_007677.1 identified by similarity to SP:P36840; match to protein family HMM PF00696; match to protein family HMM TIGR00761; acetylglutamate kinase 2752476 argB 3850847 argB Salinibacter ruber DSM 13855 acetylglutamate kinase YP_446324.1 2751673 D 309807 CDS YP_446325.1 83816294 3852056 2752611..2753696 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20A family peptidase 2753696 3852056 SRU_2220 Salinibacter ruber DSM 13855 M20A family peptidase YP_446325.1 2752611 D 309807 CDS YP_446326.1 83815463 3853057 2753764..2755077 1 NC_007677.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2755077 argH 3853057 argH Salinibacter ruber DSM 13855 argininosuccinate lyase YP_446326.1 2753764 D 309807 CDS YP_446327.1 83814056 3852500 complement(2755091..2755888) 1 NC_007677.1 identified by match to protein family HMM PF03741; TerC family integral membrane protein 2755888 3852500 SRU_2222 Salinibacter ruber DSM 13855 TerC family integral membrane protein YP_446327.1 2755091 R 309807 CDS YP_446328.1 83816466 3852833 complement(2756076..2756519) 1 NC_007677.1 hypothetical protein 2756519 3852833 SRU_2223 Salinibacter ruber DSM 13855 hypothetical protein YP_446328.1 2756076 R 309807 CDS YP_446329.1 83815666 3851003 2756874..2757344 1 NC_007677.1 photoactive yellow protein 2757344 3851003 SRU_2224 Salinibacter ruber DSM 13855 photoactive yellow protein YP_446329.1 2756874 D 309807 CDS YP_446330.1 83815254 3853022 complement(2757357..2760215) 1 NC_007677.1 identified by match to protein family HMM PF03699; hypothetical protein 2760215 3853022 SRU_2225 Salinibacter ruber DSM 13855 hypothetical protein YP_446330.1 2757357 R 309807 CDS YP_446331.1 83815748 3852756 2760833..2761084 1 NC_007677.1 hypothetical protein 2761084 3852756 SRU_2226 Salinibacter ruber DSM 13855 hypothetical protein YP_446331.1 2760833 D 309807 CDS YP_446332.1 83816354 3851850 2761234..2762010 1 NC_007677.1 hypothetical protein 2762010 3851850 SRU_2227 Salinibacter ruber DSM 13855 hypothetical protein YP_446332.1 2761234 D 309807 CDS YP_446333.1 83814529 3852604 complement(2762042..2763052) 1 NC_007677.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 2763052 3852604 SRU_2228 Salinibacter ruber DSM 13855 SPFH domain-containing protein YP_446333.1 2762042 R 309807 CDS YP_446334.1 83815141 3852948 complement(2763100..2764014) 1 NC_007677.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 2764014 3852948 SRU_2229 Salinibacter ruber DSM 13855 SPFH domain-containing protein YP_446334.1 2763100 R 309807 CDS YP_446335.1 83815735 3852743 complement(2764057..2764653) 1 NC_007677.1 identified by match to protein family HMM PF01957; nodulation efficiency protein D (NfeD) 2764653 3852743 SRU_2230 Salinibacter ruber DSM 13855 nodulation efficiency protein D (NfeD) YP_446335.1 2764057 R 309807 CDS YP_446336.1 83814476 3851795 2764638..2765597 1 NC_007677.1 identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; YfiH 2765597 3851795 SRU_2231 Salinibacter ruber DSM 13855 YfiH YP_446336.1 2764638 D 309807 CDS YP_446337.1 83815417 3852266 2765684..2766727 1 NC_007677.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 2766727 3852266 SRU_2232 Salinibacter ruber DSM 13855 alpha/beta hydrolase YP_446337.1 2765684 D 309807 CDS YP_446338.1 83816027 3851679 complement(2766776..2768530) 1 NC_007677.1 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 2768530 recJ 3851679 recJ Salinibacter ruber DSM 13855 single-stranded-DNA-specific exonuclease RecJ YP_446338.1 2766776 R 309807 CDS YP_446339.1 83815560 3852233 2769096..2770514 1 NC_007677.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2770514 rho 3852233 rho Salinibacter ruber DSM 13855 transcription termination factor Rho YP_446339.1 2769096 D 309807 CDS YP_446340.1 83814657 3851431 2770568..2773846 1 NC_007677.1 identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM PF07676; MdsD protein 2773846 3851431 SRU_2235 Salinibacter ruber DSM 13855 MdsD protein YP_446340.1 2770568 D 309807 CDS YP_446341.1 83814259 3852488 2774011..2774757 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01548; match to protein family HMM TIGR01549; HAD family hydrolase 2774757 3852488 SRU_2236 Salinibacter ruber DSM 13855 HAD family hydrolase YP_446341.1 2774011 D 309807 CDS YP_446342.1 83815059 3851288 complement(2774860..2775486) 1 NC_007677.1 identified by match to protein family HMM PF00691; OmpA domain-containing protein 2775486 3851288 SRU_2237 Salinibacter ruber DSM 13855 OmpA domain-containing protein YP_446342.1 2774860 R 309807 CDS YP_446343.1 83816096 3850576 complement(2775561..2776481) 1 NC_007677.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 2776481 3850576 SRU_2238 Salinibacter ruber DSM 13855 NUDIX family hydrolase YP_446343.1 2775561 R 309807 CDS YP_446344.1 83816627 3852081 2776624..2778402 1 NC_007677.1 identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; sulfate transporter 2778402 3852081 SRU_2239 Salinibacter ruber DSM 13855 sulfate transporter YP_446344.1 2776624 D 309807 CDS YP_446345.1 83814580 3852969 complement(2778444..2779115) 1 NC_007677.1 hypothetical protein 2779115 3852969 SRU_2240 Salinibacter ruber DSM 13855 hypothetical protein YP_446345.1 2778444 R 309807 CDS YP_446346.1 83815346 3853192 2779114..2779788 1 NC_007677.1 hypothetical protein 2779788 3853192 SRU_2241 Salinibacter ruber DSM 13855 hypothetical protein YP_446346.1 2779114 D 309807 CDS YP_446347.1 83815491 3853085 complement(2779799..2780137) 1 NC_007677.1 identified by match to protein family HMM TIGR02610; polyhydroxyalkanoic acid system protein 2780137 3853085 SRU_2242 Salinibacter ruber DSM 13855 polyhydroxyalkanoic acid system protein YP_446347.1 2779799 R 309807 CDS YP_446348.1 83816319 3851946 2780252..2782795 1 NC_007677.1 identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein 2782795 3851946 SRU_2243 Salinibacter ruber DSM 13855 zinc-dependent carboxypeptidase domain-containing protein YP_446348.1 2780252 D 309807 CDS YP_446349.1 83814258 3852487 complement(2782893..2783231) 1 NC_007677.1 AsnC family transcriptional regulator 2783231 3852487 SRU_2244 Salinibacter ruber DSM 13855 AsnC family transcriptional regulator YP_446349.1 2782893 R 309807 CDS YP_446350.1 83814954 3851259 2783283..2783585 1 NC_007677.1 identified by match to protein family HMM PF01541; GIY-YIG catalytic domain-containing protein 2783585 3851259 SRU_2245 Salinibacter ruber DSM 13855 GIY-YIG catalytic domain-containing protein YP_446350.1 2783283 D 309807 CDS YP_446351.1 83815612 3850675 complement(2783598..2785283) 1 NC_007677.1 identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta protein 2785283 pccB 3850675 pccB Salinibacter ruber DSM 13855 propionyl-CoA carboxylase subunit beta protein YP_446351.1 2783598 R 309807 CDS YP_446352.1 83816219 3851832 2785583..2786587 1 NC_007677.1 hypothetical protein 2786587 3851832 SRU_2247 Salinibacter ruber DSM 13855 hypothetical protein YP_446352.1 2785583 D 309807 CDS YP_446353.1 83816069 3853179 2786587..2787990 1 NC_007677.1 identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 2787990 3853179 SRU_2248 Salinibacter ruber DSM 13855 osteoblast specific factor 2-related protein YP_446353.1 2786587 D 309807 CDS YP_446354.1 83816830 3851140 2788334..2788984 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase ECF-type sigma factor 2788984 3851140 SRU_2249 Salinibacter ruber DSM 13855 RNA polymerase ECF-type sigma factor YP_446354.1 2788334 D 309807 CDS YP_446355.1 83814219 3850464 2789035..2790075 1 NC_007677.1 identified by match to protein family HMM PF04773; transmembrane sensor 2790075 3850464 SRU_2250 Salinibacter ruber DSM 13855 transmembrane sensor YP_446355.1 2789035 D 309807 CDS YP_446356.1 83814794 3850886 2790121..2792934 1 NC_007677.1 identified by match to protein family HMM PF00593; TonB-dependent receptor domain-containing protein 2792934 3850886 SRU_2251 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446356.1 2790121 D 309807 CDS YP_446357.1 83815809 3851615 2793118..2793630 1 NC_007677.1 hypothetical protein 2793630 3851615 SRU_2252 Salinibacter ruber DSM 13855 hypothetical protein YP_446357.1 2793118 D 309807 CDS YP_446358.1 83816443 3852810 complement(2793717..2795843) 1 NC_007677.1 alpha-glucosidase 2795843 susB 3852810 susB Salinibacter ruber DSM 13855 alpha-glucosidase YP_446358.1 2793717 R 309807 CDS YP_446359.1 83815287 3850953 complement(2796458..2796853) 1 NC_007677.1 hypothetical protein 2796853 3850953 SRU_2254 Salinibacter ruber DSM 13855 hypothetical protein YP_446359.1 2796458 R 309807 CDS YP_446360.1 83815221 3852302 complement(2797093..2798754) 1 NC_007677.1 identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase 2798754 3852302 SRU_2255 Salinibacter ruber DSM 13855 glutamate dehydrogenase YP_446360.1 2797093 R 309807 CDS YP_446361.1 83815824 3851630 2798824..2800881 1 NC_007677.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02254; monovalent cation:proton antiporter-2 (CPA2) family protein 2800881 3851630 SRU_2256 Salinibacter ruber DSM 13855 monovalent cation:proton antiporter-2 (CPA2) family protein YP_446361.1 2798824 D 309807 CDS YP_446362.1 83816751 3852558 2800999..2803446 1 NC_007677.1 identified by match to protein family HMM PF00324; Na-K-Cl cotransporter 2803446 3852558 SRU_2257 Salinibacter ruber DSM 13855 Na-K-Cl cotransporter YP_446362.1 2800999 D 309807 CDS YP_446363.1 83816171 3851550 2803852..2806194 1 NC_007677.1 identified by similarity to GB:AAV45750.1; match to protein family HMM PF00324; match to protein family HMM PF00582; cationic amino acid transporter 2806194 cat1 3851550 cat1 Salinibacter ruber DSM 13855 cationic amino acid transporter YP_446363.1 2803852 D 309807 CDS YP_446364.1 83816710 3850827 2806267..2808531 1 NC_007677.1 identified by similarity to GB:AAM07846.1; match to protein family HMM PF00324; Na-K-Cl cotransporter 2808531 3850827 SRU_2259 Salinibacter ruber DSM 13855 Na-K-Cl cotransporter YP_446364.1 2806267 D 309807 CDS YP_446365.1 83816657 3852658 2808610..2809956 1 NC_007677.1 identified by similarity to GB:AAV44781.1; match to protein family HMM PF00324; cationic amino acid transporter 2809956 cat2 3852658 cat2 Salinibacter ruber DSM 13855 cationic amino acid transporter YP_446365.1 2808610 D 309807 CDS YP_446366.1 83816396 3851736 2809953..2810717 1 NC_007677.1 identified by similarity to GB:AAV44780.1; universal stress protein 2810717 usp12 3851736 usp12 Salinibacter ruber DSM 13855 universal stress protein YP_446366.1 2809953 D 309807 CDS YP_446367.1 83814362 3851350 complement(2810812..2811474) 1 NC_007677.1 identified by similarity to GB:AAV45302.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein 2811474 trkA1 3851350 trkA1 Salinibacter ruber DSM 13855 Trk potassium uptake system protein YP_446367.1 2810812 R 309807 CDS YP_446368.1 83814889 3851311 complement(2811503..2812864) 1 NC_007677.1 identified by match to protein family HMM PF00324; cationic amino acid transporter 2812864 cat3 3851311 cat3 Salinibacter ruber DSM 13855 cationic amino acid transporter YP_446368.1 2811503 R 309807 CDS YP_446369.1 83815392 3850904 2813092..2813805 1 NC_007677.1 identified by similarity to PIR:AB2070; hypothetical protein 2813805 3850904 SRU_2264 Salinibacter ruber DSM 13855 hypothetical protein YP_446369.1 2813092 D 309807 CDS YP_446370.1 83816363 3851859 complement(2813947..2815581) 1 NC_007677.1 identified by similarity to GB:AAV47313.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein 2815581 trkA2 3851859 trkA2 Salinibacter ruber DSM 13855 Trk potassium uptake system protein YP_446370.1 2813947 R 309807 CDS YP_446371.1 83816624 3852078 complement(2815779..2816651) 1 NC_007677.1 identified by similarity to GB:AAO36760.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein 2816651 trkA3 3852078 trkA3 Salinibacter ruber DSM 13855 Trk potassium uptake system protein YP_446371.1 2815779 R 309807 CDS YP_446372.1 83816458 3852825 2816729..2817007 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2817007 3852825 SRU_2267 Salinibacter ruber DSM 13855 ISSru2, transposase insA YP_446372.1 2816729 D 309807 CDS YP_446373.1 83814906 3852355 complement(2817561..2818985) 1 NC_007677.1 identified by match to protein family HMM PF02386; TrkH potassium uptake protein 2818985 trkH1 3852355 trkH1 Salinibacter ruber DSM 13855 TrkH potassium uptake protein YP_446373.1 2817561 R 309807 CDS YP_446374.1 83814121 3851108 2819321..2820661 1 NC_007677.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 2820661 trkA 3851108 trkA Salinibacter ruber DSM 13855 potassium transporter peripheral membrane protein YP_446374.1 2819321 D 309807 CDS YP_446375.1 83816848 3851159 2820658..2822157 1 NC_007677.1 identified by similarity to GB:AAV45748.1; match to protein family HMM PF02386; TrkH potassium uptake protein 2822157 trkH2 3851159 trkH2 Salinibacter ruber DSM 13855 TrkH potassium uptake protein YP_446375.1 2820658 D 309807 CDS YP_446376.1 83815889 3851578 2822503..2824131 1 NC_007677.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02254; potassium efflux system protein 2824131 3851578 SRU_2272 Salinibacter ruber DSM 13855 potassium efflux system protein YP_446376.1 2822503 D 309807 CDS YP_446377.1 83815278 3851060 2824128..2825705 1 NC_007677.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02254; potassium-efflux system protein 2825705 3851060 SRU_2273 Salinibacter ruber DSM 13855 potassium-efflux system protein YP_446377.1 2824128 D 309807 CDS YP_446378.1 83815710 3850617 2825819..2828029 1 NC_007677.1 identified by match to protein family HMM PF00324; cationic amino acid transporter 2828029 cat4 3850617 cat4 Salinibacter ruber DSM 13855 cationic amino acid transporter YP_446378.1 2825819 D 309807 CDS YP_446379.1 83815280 3851062 2828198..2830333 1 NC_007677.1 identified by similarity to PIR:F84279; match to protein family HMM PF00324; match to protein family HMM PF02080; cationic amino acid transporter 2830333 cat5 3851062 cat5 Salinibacter ruber DSM 13855 cationic amino acid transporter YP_446379.1 2828198 D 309807 CDS YP_446380.1 83814181 3850858 2830774..2834241 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; PAS domain-containing protein 2834241 3850858 SRU_2276 Salinibacter ruber DSM 13855 PAS domain-containing protein YP_446380.1 2830774 D 309807 CDS YP_446381.1 83814489 3851711 2834406..2835263 1 NC_007677.1 identified by match to protein family HMM PF01488; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase 2835263 aroE 3851711 aroE Salinibacter ruber DSM 13855 shikimate 5-dehydrogenase YP_446381.1 2834406 D 309807 CDS YP_446382.1 83816592 3853122 2835396..2836034 1 NC_007677.1 hypothetical protein 2836034 3853122 SRU_2278 Salinibacter ruber DSM 13855 hypothetical protein YP_446382.1 2835396 D 309807 CDS YP_446383.1 83816511 3851985 2836079..2836465 1 NC_007677.1 hypothetical protein 2836465 3851985 SRU_2279 Salinibacter ruber DSM 13855 hypothetical protein YP_446383.1 2836079 D 309807 CDS YP_446384.1 83815658 3850995 complement(2836524..2836946) 1 NC_007677.1 redox protein 2836946 3850995 SRU_2280 Salinibacter ruber DSM 13855 redox protein YP_446384.1 2836524 R 309807 CDS YP_446385.1 83814105 3850918 complement(2837048..2837509) 1 NC_007677.1 hypothetical protein 2837509 3850918 SRU_2281 Salinibacter ruber DSM 13855 hypothetical protein YP_446385.1 2837048 R 309807 CDS YP_446386.1 83816773 3851201 complement(2837609..2838313) 1 NC_007677.1 identified by match to protein family HMM PF00106; 20-beta-hydroxysteroid dehydrogenase 2838313 3851201 SRU_2282 Salinibacter ruber DSM 13855 20-beta-hydroxysteroid dehydrogenase YP_446386.1 2837609 R 309807 CDS YP_446387.1 83815791 3852174 2838600..2839082 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 2839082 3852174 SRU_2283 Salinibacter ruber DSM 13855 hypothetical protein YP_446387.1 2838600 D 309807 CDS YP_446388.1 83816260 3852923 complement(2839155..2840996) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 2840996 3852923 SRU_2284 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446388.1 2839155 R 309807 CDS YP_446389.1 83815696 3850603 complement(2841695..2842528) 1 NC_007677.1 identified by match to protein family HMM PF00881; nitroreductase family protein 2842528 3850603 SRU_2285 Salinibacter ruber DSM 13855 nitroreductase family protein YP_446389.1 2841695 R 309807 CDS YP_446390.1 83814890 3851312 complement(2842512..2843111) 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2843111 3851312 SRU_2286 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_446390.1 2842512 R 309807 CDS YP_446391.1 83814964 3851270 2843185..2844597 1 NC_007677.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 2844597 ilvA 3851270 ilvA Salinibacter ruber DSM 13855 threonine dehydratase YP_446391.1 2843185 D 309807 CDS YP_446392.1 83814101 3850914 2844943..2845227 1 NC_007677.1 hypothetical protein 2845227 3850914 SRU_2288 Salinibacter ruber DSM 13855 hypothetical protein YP_446392.1 2844943 D 309807 CDS YP_446393.1 83816483 3852852 2845247..2847598 1 NC_007677.1 identified by match to protein family HMM PF00271; match to protein family HMM PF01844; match to protein family HMM PF04851; helicase 2847598 3852852 SRU_2289 Salinibacter ruber DSM 13855 helicase YP_446393.1 2845247 D 309807 CDS YP_446394.1 83815668 3851005 2847602..2848471 1 NC_007677.1 hypothetical protein 2848471 3851005 SRU_2290 Salinibacter ruber DSM 13855 hypothetical protein YP_446394.1 2847602 D 309807 CDS YP_446395.1 83815192 3851773 complement(2848488..2849804) 1 NC_007677.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 2849804 3851773 SRU_2291 Salinibacter ruber DSM 13855 MATE efflux family protein YP_446395.1 2848488 R 309807 CDS YP_446396.1 83814442 3850728 2850392..2851102 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 2851102 drrA 3850728 drrA Salinibacter ruber DSM 13855 response regulator DrrA YP_446396.1 2850392 D 309807 CDS YP_446397.1 83816189 3851568 2851205..2852272 1 NC_007677.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate ABC transporter substrate-binding protein 2852272 pstS 3851568 pstS Salinibacter ruber DSM 13855 phosphate ABC transporter substrate-binding protein YP_446397.1 2851205 D 309807 CDS YP_446398.1 83814271 3850340 2852315..2853280 1 NC_007677.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 2853280 pstC 3850340 pstC Salinibacter ruber DSM 13855 phosphate ABC transporter permease YP_446398.1 2852315 D 309807 CDS YP_446399.1 83816144 3850546 2853309..2854253 1 NC_007677.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 2854253 pstA 3850546 pstA Salinibacter ruber DSM 13855 phosphate ABC transporter permease YP_446399.1 2853309 D 309807 CDS YP_446400.1 83816763 3852570 2854434..2855183 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 2855183 pstB 3852570 pstB Salinibacter ruber DSM 13855 phosphate ABC transporter ATP-binding protein YP_446400.1 2854434 D 309807 CDS YP_446401.1 83816218 3851831 2855229..2855966 1 NC_007677.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 2855966 phoU 3851831 phoU Salinibacter ruber DSM 13855 phosphate transport system regulatory protein PhoU YP_446401.1 2855229 D 309807 CDS YP_446402.1 83815619 3850682 complement(2855983..2857653) 1 NC_007677.1 hypothetical protein 2857653 3850682 SRU_2298 Salinibacter ruber DSM 13855 hypothetical protein YP_446402.1 2855983 R 309807 CDS YP_446403.1 83814881 3851303 complement(2857782..2864852) 1 NC_007677.1 identified by match to protein family HMM PF00041; match to protein family HMM PF00082; peptidase 2864852 3851303 SRU_2299 Salinibacter ruber DSM 13855 peptidase YP_446403.1 2857782 R 309807 CDS YP_446404.1 83816375 3851871 complement(2865826..2866743) 1 NC_007677.1 identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase 2866743 3851871 SRU_2301 Salinibacter ruber DSM 13855 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_446404.1 2865826 R 309807 CDS YP_446405.1 83815727 3852735 2867408..2868529 1 NC_007677.1 identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 2868529 ribD 3852735 ribD Salinibacter ruber DSM 13855 riboflavin biosynthesis protein RibD YP_446405.1 2867408 D 309807 CDS YP_446406.1 83815118 3852649 2868590..2869243 1 NC_007677.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2869243 ribE 3852649 ribE Salinibacter ruber DSM 13855 riboflavin synthase subunit alpha YP_446406.1 2868590 D 309807 CDS YP_446407.1 83815200 3851781 complement(2869570..2870439) 1 NC_007677.1 hypothetical protein 2870439 3851781 SRU_2304 Salinibacter ruber DSM 13855 hypothetical protein YP_446407.1 2869570 R 309807 CDS YP_446408.1 83814070 3852474 complement(2870503..2871075) 1 NC_007677.1 hypothetical protein 2871075 3852474 SRU_2305 Salinibacter ruber DSM 13855 hypothetical protein YP_446408.1 2870503 R 309807 CDS YP_446409.1 83814880 3851302 2871448..2872467 1 NC_007677.1 identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 2872467 3851302 SRU_2306 Salinibacter ruber DSM 13855 zinc-binding dehydrogenase family oxidoreductase YP_446409.1 2871448 D 309807 CDS YP_446410.1 83815471 3853065 complement(2872540..2873763) 1 NC_007677.1 identified by match to protein family HMM PF07690; major facilitator superfamily protein 2873763 3853065 SRU_2307 Salinibacter ruber DSM 13855 major facilitator superfamily protein YP_446410.1 2872540 R 309807 CDS YP_446411.1 83816412 3851752 complement(2874839..2876440) 1 NC_007677.1 identified by match to protein family HMM PF00128; alpha-amylase 2876440 3851752 SRU_2308 Salinibacter ruber DSM 13855 alpha-amylase YP_446411.1 2874839 R 309807 CDS YP_446412.1 83814981 3851190 complement(2876421..2877047) 1 NC_007677.1 identified by match to protein family HMM PF00106; short chain dehydrogenase 2877047 3851190 SRU_2309 Salinibacter ruber DSM 13855 short chain dehydrogenase YP_446412.1 2876421 R 309807 CDS YP_446413.1 83815264 3851045 2877738..2879075 1 NC_007677.1 identified by match to protein family HMM PF00324; amino acid permease family protein 2879075 3851045 SRU_2312 Salinibacter ruber DSM 13855 amino acid permease family protein YP_446413.1 2877738 D 309807 CDS YP_446414.1 83815834 3851640 complement(2879106..2881814) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; ferric enterobactin receptor 2881814 3851640 SRU_2313 Salinibacter ruber DSM 13855 ferric enterobactin receptor YP_446414.1 2879106 R 309807 CDS YP_446415.1 83816808 3851236 2882121..2883068 1 NC_007677.1 identified by match to protein family HMM PF01135; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2883068 3851236 SRU_2314 Salinibacter ruber DSM 13855 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_446415.1 2882121 D 309807 CDS YP_446416.1 83815933 3850431 2883011..2886265 1 NC_007677.1 identified by match to protein family HMM PF00580; match to protein family HMM PF00929; DNA helicase II 2886265 3850431 SRU_2315 Salinibacter ruber DSM 13855 DNA helicase II YP_446416.1 2883011 D 309807 CDS YP_446417.1 83816736 3852543 2886338..2887165 1 NC_007677.1 identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 2887165 3852543 SRU_2316 Salinibacter ruber DSM 13855 hypothetical protein YP_446417.1 2886338 D 309807 CDS YP_446418.1 83814303 3851095 complement(2887237..2888178) 1 NC_007677.1 identified by match to protein family HMM PF01063; match to protein family HMM TIGR01122; branched-chain amino acid aminotransferase 2888178 ilvE 3851095 ilvE Salinibacter ruber DSM 13855 branched-chain amino acid aminotransferase YP_446418.1 2887237 R 309807 CDS YP_446419.1 83815744 3852752 complement(2888253..2889080) 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 2889080 3852752 SRU_2318 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_446419.1 2888253 R 309807 CDS YP_446420.1 83816196 3851809 complement(2889084..2889593) 1 NC_007677.1 identified by match to protein family HMM PF00583; diamine acetyltransferase 2 2889593 3851809 SRU_2319 Salinibacter ruber DSM 13855 diamine acetyltransferase 2 YP_446420.1 2889084 R 309807 CDS YP_446421.1 83814462 3852203 complement(2889645..2891219) 1 NC_007677.1 identified by match to protein family HMM PF01078; magnesium chelatase subunit ChlI family protein 2891219 3852203 SRU_2320 Salinibacter ruber DSM 13855 magnesium chelatase subunit ChlI family protein YP_446421.1 2889645 R 309807 CDS YP_446422.1 83814973 3851182 complement(2891459..2892115) 1 NC_007677.1 hypothetical protein 2892115 3851182 SRU_2321 Salinibacter ruber DSM 13855 hypothetical protein YP_446422.1 2891459 R 309807 CDS YP_446423.1 83816845 3851156 complement(2892573..2895026) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; DNA-binding response regulator/sensor histidine kinase 2895026 3851156 SRU_2322 Salinibacter ruber DSM 13855 DNA-binding response regulator/sensor histidine kinase YP_446423.1 2892573 R 309807 CDS YP_446424.1 83814407 3851180 2895113..2895682 1 NC_007677.1 hypothetical protein 2895682 3851180 SRU_2323 Salinibacter ruber DSM 13855 hypothetical protein YP_446424.1 2895113 D 309807 CDS YP_446425.1 83815500 3852310 complement(2895747..2897135) 1 NC_007677.1 hypothetical protein 2897135 3852310 SRU_2324 Salinibacter ruber DSM 13855 hypothetical protein YP_446425.1 2895747 R 309807 CDS YP_446426.1 83815051 3851280 2897095..2899605 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 2899605 3851280 SRU_2325 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446426.1 2897095 D 309807 CDS YP_446427.1 83814339 3851386 2899813..2900922 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; two-component signal transduction histidine kinase 2900922 3851386 SRU_2326 Salinibacter ruber DSM 13855 two-component signal transduction histidine kinase YP_446427.1 2899813 D 309807 CDS YP_446428.1 83815827 3851633 2900944..2901780 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr DNA-binding domain-containing protein 2901780 3851633 SRU_2327 Salinibacter ruber DSM 13855 LytTr DNA-binding domain-containing protein YP_446428.1 2900944 D 309807 CDS YP_446429.1 83815358 3850654 complement(2901956..2903008) 1 NC_007677.1 identified by match to protein family HMM PF00296; luciferase-like monooxygenase superfamily protein 2903008 3850654 SRU_2328 Salinibacter ruber DSM 13855 luciferase-like monooxygenase superfamily protein YP_446429.1 2901956 R 309807 CDS YP_446430.1 83814586 3851066 complement(2903056..2904003) 1 NC_007677.1 glutathione synthase 2904003 3851066 SRU_2329 Salinibacter ruber DSM 13855 glutathione synthase YP_446430.1 2903056 R 309807 CDS YP_446431.1 83816774 3851202 complement(2904291..2905904) 1 NC_007677.1 identified by match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 2905904 3851202 SRU_2330 Salinibacter ruber DSM 13855 deoxyribodipyrimidine photolyase YP_446431.1 2904291 R 309807 CDS YP_446432.1 83814997 3853036 2906156..2906590 1 NC_007677.1 identified by match to protein family HMM PF00011; heat shock protein, class I 2906590 hsp 3853036 hsp Salinibacter ruber DSM 13855 heat shock protein, class I YP_446432.1 2906156 D 309807 CDS YP_446433.1 83814394 3851167 complement(2906791..2907462) 1 NC_007677.1 phosphatidylethanolamine N-methyltransferase 2907462 3851167 SRU_2332 Salinibacter ruber DSM 13855 phosphatidylethanolamine N-methyltransferase YP_446433.1 2906791 R 309807 CDS YP_446434.1 83814994 3853033 2907414..2908778 1 NC_007677.1 identified by match to protein family HMM PF02515; L-carnitine dehydratase 2908778 3853033 SRU_2333 Salinibacter ruber DSM 13855 L-carnitine dehydratase YP_446434.1 2907414 D 309807 CDS YP_446435.1 83814713 3851506 complement(2908804..2910342) 1 NC_007677.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase 2910342 glyS 3851506 glyS Salinibacter ruber DSM 13855 glycyl-tRNA synthetase YP_446435.1 2908804 R 309807 CDS YP_446436.1 83816567 3851911 2910448..2910726 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 2910726 3851911 SRU_2335 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_446436.1 2910448 D 309807 CDS YP_446437.1 83815468 3853062 2910690..2911166 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 2911166 3853062 SRU_2336 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_446437.1 2910690 D 309807 CDS YP_446438.1 83815404 3852979 complement(2911170..2911556) 1 NC_007677.1 identified by match to protein family HMM TIGR02436; hypothetical protein 2911556 3852979 SRU_2337 Salinibacter ruber DSM 13855 hypothetical protein YP_446438.1 2911170 R 309807 CDS YP_446439.1 83814790 3850882 complement(2911617..2912318) 1 NC_007677.1 identified by match to protein family HMM PF00633; match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC 2912318 radC 3850882 radC Salinibacter ruber DSM 13855 DNA repair protein RadC YP_446439.1 2911617 R 309807 CDS YP_446440.1 83814147 3850940 complement(2912341..2912457) 1 NC_007677.1 hypothetical protein 2912457 3850940 SRU_2339 Salinibacter ruber DSM 13855 hypothetical protein YP_446440.1 2912341 R 309807 CDS YP_446441.1 83816381 3851877 complement(2912522..2913643) 1 NC_007677.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2913643 3851877 SRU_2340 Salinibacter ruber DSM 13855 transcription termination factor Rho YP_446441.1 2912522 R 309807 CDS YP_446442.1 83815754 3852762 2914325..2915101 1 NC_007677.1 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 2915101 3852762 SRU_2341 Salinibacter ruber DSM 13855 alpha/beta fold family hydrolase YP_446442.1 2914325 D 309807 CDS YP_446443.1 83814912 3852361 2915221..2916852 1 NC_007677.1 identified by match to protein family HMM PF02875; Mur ligase family protein 2916852 3852361 SRU_2342 Salinibacter ruber DSM 13855 Mur ligase family protein YP_446443.1 2915221 D 309807 CDS YP_446444.1 83815863 3852521 complement(2916868..2917560) 1 NC_007677.1 hypothetical protein 2917560 3852521 SRU_2343 Salinibacter ruber DSM 13855 hypothetical protein YP_446444.1 2916868 R 309807 CDS YP_446445.1 83816682 3852683 complement(2917837..2918373) 1 NC_007677.1 identified by match to protein family HMM PF00903; glyoxalase family protein 2918373 3852683 SRU_2344 Salinibacter ruber DSM 13855 glyoxalase family protein YP_446445.1 2917837 R 309807 CDS YP_446446.1 83814567 3852956 complement(2918854..2919990) 1 NC_007677.1 identified by match to protein family HMM PF00850; acetoin utilization protein acuC 2919990 3852956 SRU_2345 Salinibacter ruber DSM 13855 acetoin utilization protein acuC YP_446446.1 2918854 R 309807 CDS YP_446447.1 83816001 3851653 2920260..2921465 1 NC_007677.1 identified by match to protein family HMM PF00079; serpin (serine proteinase inhibitor) 2921465 3851653 SRU_2346 Salinibacter ruber DSM 13855 serpin (serine proteinase inhibitor) YP_446447.1 2920260 D 309807 CDS YP_446448.1 83816270 3852032 complement(2921500..2921916) 1 NC_007677.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; hypothetical protein 2921916 3852032 SRU_2347 Salinibacter ruber DSM 13855 hypothetical protein YP_446448.1 2921500 R 309807 CDS YP_446449.1 83814058 3852462 complement(2921955..2922962) 1 NC_007677.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2922962 accA 3852462 accA Salinibacter ruber DSM 13855 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_446449.1 2921955 R 309807 CDS YP_446450.1 83815609 3850790 complement(2923948..2924490) 1 NC_007677.1 identified by match to protein family HMM PF01613; oxidoreductase 2924490 3850790 SRU_2350 Salinibacter ruber DSM 13855 oxidoreductase YP_446450.1 2923948 R 309807 CDS YP_446451.1 83816547 3851891 complement(2924631..2925797) 1 NC_007677.1 identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ 2925797 dnaJ 3851891 dnaJ Salinibacter ruber DSM 13855 chaperone protein DnaJ YP_446451.1 2924631 R 309807 CDS YP_446452.1 83815828 3851634 complement(2925897..2926568) 1 NC_007677.1 identified by match to protein family HMM PF01025; co-chaperone GrpE 2926568 grpE 3851634 grpE Salinibacter ruber DSM 13855 co-chaperone GrpE YP_446452.1 2925897 R 309807 CDS YP_446453.1 83814235 3852583 complement(2926678..2927880) 1 NC_007677.1 identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA 2927880 hrcA 3852583 hrcA Salinibacter ruber DSM 13855 heat-inducible transcription repressor HrcA YP_446453.1 2926678 R 309807 CDS YP_446454.1 83815032 3852621 2927937..2930177 1 NC_007677.1 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 2930177 sppA 3852621 sppA Salinibacter ruber DSM 13855 signal peptide peptidase SppA, 67K type YP_446454.1 2927937 D 309807 CDS YP_446455.1 83815456 3853050 complement(2930224..2931795) 1 NC_007677.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 2931795 gpmI 3853050 gpmI Salinibacter ruber DSM 13855 phosphoglyceromutase YP_446455.1 2930224 R 309807 CDS YP_446456.1 83816451 3852818 complement(2931905..2932879) 1 NC_007677.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 2932879 nth 3852818 nth Salinibacter ruber DSM 13855 endonuclease III YP_446456.1 2931905 R 309807 CDS YP_446457.1 83815251 3853019 2932860..2934092 1 NC_007677.1 hypothetical protein 2934092 3853019 SRU_2357 Salinibacter ruber DSM 13855 hypothetical protein YP_446457.1 2932860 D 309807 CDS YP_446458.1 83816170 3851549 complement(2934187..2934720) 1 NC_007677.1 hypothetical protein 2934720 3851549 SRU_2358 Salinibacter ruber DSM 13855 hypothetical protein YP_446458.1 2934187 R 309807 CDS YP_446459.1 83816749 3852556 complement(2934899..2935432) 1 NC_007677.1 identified by match to protein family HMM PF00011; heat shock protein, class I 2935432 hsp 3852556 hsp Salinibacter ruber DSM 13855 heat shock protein, class I YP_446459.1 2934899 R 309807 CDS YP_446460.1 83815437 3850734 complement(2935646..2936935) 1 NC_007677.1 identified by match to protein family HMM PF01557; match to protein family HMM TIGR01266; fumarylacetoacetase 2936935 fahA 3850734 fahA Salinibacter ruber DSM 13855 fumarylacetoacetase YP_446460.1 2935646 R 309807 CDS YP_446461.1 83814792 3850884 complement(2937029..2938090) 1 NC_007677.1 hypothetical protein 2938090 3850884 SRU_2361 Salinibacter ruber DSM 13855 hypothetical protein YP_446461.1 2937029 R 309807 CDS YP_446462.1 83816570 3851914 2938206..2939951 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 2939951 3851914 SRU_2362 Salinibacter ruber DSM 13855 hypothetical protein YP_446462.1 2938206 D 309807 CDS YP_446463.1 83815911 3851601 2940075..2941313 1 NC_007677.1 identified by match to protein family HMM PF01053; Cys/Met metabolism PLP-dependent enzyme superfamily protein 2941313 3851601 SRU_2363 Salinibacter ruber DSM 13855 Cys/Met metabolism PLP-dependent enzyme superfamily protein YP_446463.1 2940075 D 309807 CDS YP_446464.1 83816141 3850543 complement(2941331..2941837) 1 NC_007677.1 identified by match to protein family HMM PF04248; hypothetical protein 2941837 3850543 SRU_2364 Salinibacter ruber DSM 13855 hypothetical protein YP_446464.1 2941331 R 309807 CDS YP_446465.1 83815144 3852951 complement(2941881..2943413) 1 NC_007677.1 identified by match to protein family HMM PF00501; long-chain-fatty-acid-CoA ligase 2943413 3852951 SRU_2365 Salinibacter ruber DSM 13855 long-chain-fatty-acid-CoA ligase YP_446465.1 2941881 R 309807 CDS YP_446466.1 83814162 3850485 complement(2943474..2943929) 1 NC_007677.1 hypothetical protein 2943929 3850485 SRU_2366 Salinibacter ruber DSM 13855 hypothetical protein YP_446466.1 2943474 R 309807 CDS YP_446467.1 83816762 3852569 complement(2943954..2945600) 1 NC_007677.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase 2945600 pgm 3852569 pgm Salinibacter ruber DSM 13855 phosphomannomutase YP_446467.1 2943954 R 309807 CDS YP_446468.1 83814684 3853092 2945588..2946580 1 NC_007677.1 identified by match to protein family HMM PF02628; cytochrome aa3 oxidase assembly protein, CtaA 2946580 3853092 SRU_2368 Salinibacter ruber DSM 13855 cytochrome aa3 oxidase assembly protein, CtaA YP_446468.1 2945588 D 309807 CDS YP_446469.1 83816851 3852872 2946679..2947584 1 NC_007677.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR01473; protoheme IX farnesyltransferase 2947584 cyoE 3852872 cyoE Salinibacter ruber DSM 13855 protoheme IX farnesyltransferase YP_446469.1 2946679 D 309807 CDS YP_446470.1 83815704 3850611 2947652..2948617 1 NC_007677.1 identified by match to protein family HMM PF00005; daunorubicin resistance ATP-binding protein 2948617 drrA 3850611 drrA Salinibacter ruber DSM 13855 daunorubicin resistance ATP-binding protein YP_446470.1 2947652 D 309807 CDS YP_446471.1 83814883 3851305 2948662..2949444 1 NC_007677.1 identified by match to protein family HMM PF01061; ABC transporter 2949444 3851305 SRU_2371 Salinibacter ruber DSM 13855 ABC transporter YP_446471.1 2948662 D 309807 CDS YP_446472.1 83816348 3851844 complement(2949482..2950084) 1 NC_007677.1 identified by match to protein family HMM PF01351; ribonuclease HII 2950084 rnhB 3851844 rnhB Salinibacter ruber DSM 13855 ribonuclease HII YP_446472.1 2949482 R 309807 CDS YP_446473.1 83815331 3852121 2950300..2951892 1 NC_007677.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2951892 pckA 3852121 pckA Salinibacter ruber DSM 13855 phosphoenolpyruvate carboxykinase YP_446473.1 2950300 D 309807 CDS YP_446474.1 83815089 3850499 complement(2951933..2953378) 1 NC_007677.1 identified by match to protein family HMM PF01266; phytoene dehydrogenase 2953378 3850499 SRU_2374 Salinibacter ruber DSM 13855 phytoene dehydrogenase YP_446474.1 2951933 R 309807 CDS YP_446475.1 83816603 3853133 complement(2953429..2955252) 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase 2955252 ade 3853133 ade Salinibacter ruber DSM 13855 adenine deaminase YP_446475.1 2953429 R 309807 CDS YP_446476.1 83815659 3850996 complement(2955218..2955748) 1 NC_007677.1 hypothetical protein 2955748 3850996 SRU_2376 Salinibacter ruber DSM 13855 hypothetical protein YP_446476.1 2955218 R 309807 CDS YP_446477.1 83815352 3853199 complement(2956014..2957330) 1 NC_007677.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2957330 thrC 3853199 thrC Salinibacter ruber DSM 13855 threonine synthase YP_446477.1 2956014 R 309807 CDS YP_446478.1 83814753 3851371 complement(2957570..2958061) 1 NC_007677.1 hypothetical protein 2958061 3851371 SRU_2378 Salinibacter ruber DSM 13855 hypothetical protein YP_446478.1 2957570 R 309807 CDS YP_446479.1 83815592 3850773 complement(2958635..2960533) 1 NC_007677.1 identified by match to protein family HMM PF00501; AMP-binding protein 2960533 3850773 SRU_2380 Salinibacter ruber DSM 13855 AMP-binding protein YP_446479.1 2958635 R 309807 CDS YP_446480.1 83815963 3852700 complement(2960620..2961720) 1 NC_007677.1 identified by match to protein family HMM PF01180; match to protein family HMM TIGR01036; dihydroorotate oxidase 2961720 pyrD 3852700 pyrD Salinibacter ruber DSM 13855 dihydroorotate oxidase YP_446480.1 2960620 R 309807 CDS YP_446481.1 83815778 3852161 2961747..2962649 1 NC_007677.1 identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 2962649 3852161 SRU_2382 Salinibacter ruber DSM 13855 PhzF family phenazine biosynthesis protein YP_446481.1 2961747 D 309807 CDS YP_446482.1 83816446 3852813 complement(2962663..2965860) 1 NC_007677.1 hypothetical protein 2965860 3852813 SRU_2383 Salinibacter ruber DSM 13855 hypothetical protein YP_446482.1 2962663 R 309807 CDS YP_446483.1 83814245 3852593 2966166..2968106 1 NC_007677.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 2968106 mrdA 3852593 mrdA Salinibacter ruber DSM 13855 penicillin-binding protein 2 YP_446483.1 2966166 D 309807 CDS YP_446484.1 83814857 3851397 2968103..2969365 1 NC_007677.1 identified by match to protein family HMM PF01098; rod shape-determining protein RodA 2969365 rodA 3851397 rodA Salinibacter ruber DSM 13855 rod shape-determining protein RodA YP_446484.1 2968103 D 309807 CDS YP_446485.1 83815490 3853084 complement(2969779..2971197) 1 NC_007677.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 2971197 amt 3853084 amt Salinibacter ruber DSM 13855 ammonium transporter YP_446485.1 2969779 R 309807 CDS YP_446486.1 83816784 3851212 complement(2971341..2974391) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 2974391 uvrA 3851212 uvrA Salinibacter ruber DSM 13855 excinuclease ABC subunit A YP_446486.1 2971341 R 309807 CDS YP_446487.1 83816117 3850519 complement(2974767..2975054) 1 NC_007677.1 identified by match to protein family HMM PF03733; alkaline phosphatase like protein 2975054 3850519 SRU_2388 Salinibacter ruber DSM 13855 alkaline phosphatase like protein YP_446487.1 2974767 R 309807 CDS YP_446488.1 83816725 3850842 complement(2975081..2975530) 1 NC_007677.1 identified by match to protein family HMM PF01986; hypothetical protein 2975530 3850842 SRU_2389 Salinibacter ruber DSM 13855 hypothetical protein YP_446488.1 2975081 R 309807 CDS YP_446489.1 83814532 3852607 complement(2975527..2976645) 1 NC_007677.1 hypothetical protein 2976645 3852607 SRU_2390 Salinibacter ruber DSM 13855 hypothetical protein YP_446489.1 2975527 R 309807 CDS YP_446490.1 83816519 3851993 complement(2976692..2978659) 1 NC_007677.1 identified by match to protein family HMM PF02368; Ig-like domain-containing protein 2978659 3851993 SRU_2391 Salinibacter ruber DSM 13855 Ig-like domain-containing protein YP_446490.1 2976692 R 309807 CDS YP_446491.1 83816179 3851558 complement(2978808..2980532) 1 NC_007677.1 identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; mercuric reductase 2980532 3851558 SRU_2392 Salinibacter ruber DSM 13855 mercuric reductase YP_446491.1 2978808 R 309807 CDS YP_446492.1 83816708 3850825 2980688..2982430 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF01336; match to protein family HMM TIGR00229; sensor histidine kinase, pleC 2982430 3850825 SRU_2393 Salinibacter ruber DSM 13855 sensor histidine kinase, pleC YP_446492.1 2980688 D 309807 CDS YP_446493.1 83816114 3850594 2982441..2982668 1 NC_007677.1 identified by match to protein family HMM PF02518; sensor kinase protein rcsC 2982668 3850594 SRU_2394 Salinibacter ruber DSM 13855 sensor kinase protein rcsC YP_446493.1 2982441 D 309807 CDS YP_446494.1 83815138 3852945 2985809..2987086 1 NC_007677.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 2987086 3852945 SRU_2395 Salinibacter ruber DSM 13855 IS605 family transposase YP_446494.1 2985809 D 309807 CDS YP_446495.1 83814537 3852612 2987750..2988490 1 NC_007677.1 hypothetical protein 2988490 3852612 SRU_2396 Salinibacter ruber DSM 13855 hypothetical protein YP_446495.1 2987750 D 309807 CDS YP_446496.1 83816407 3851747 complement(2988629..2989156) 1 NC_007677.1 hypothetical protein 2989156 3851747 SRU_2397 Salinibacter ruber DSM 13855 hypothetical protein YP_446496.1 2988629 R 309807 CDS YP_446497.1 83815776 3852159 complement(2989270..2990361) 1 NC_007677.1 identified by match to protein family HMM PF00005; iron(III) ABC transporter ATP-binding protein 2990361 3852159 SRU_2398 Salinibacter ruber DSM 13855 iron(III) ABC transporter ATP-binding protein YP_446497.1 2989270 R 309807 CDS YP_446498.1 83816366 3851862 complement(2990436..2991983) 1 NC_007677.1 identified by match to protein family HMM PF00528; ABC transporter permease 2991983 3851862 SRU_2399 Salinibacter ruber DSM 13855 ABC transporter permease YP_446498.1 2990436 R 309807 CDS YP_446499.1 83816110 3850590 complement(2992135..2993226) 1 NC_007677.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 2993226 3850590 SRU_2400 Salinibacter ruber DSM 13855 extracellular solute-binding protein YP_446499.1 2992135 R 309807 CDS YP_446500.1 83815698 3850605 2993419..2995530 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF07676; acylaminoacyl-peptidase 2995530 3850605 SRU_2401 Salinibacter ruber DSM 13855 acylaminoacyl-peptidase YP_446500.1 2993419 D 309807 CDS YP_446501.1 83816055 3853165 complement(2995559..2996731) 1 NC_007677.1 identified by match to protein family HMM PF00534; glycosyl transferase family protein 2996731 3853165 SRU_2402 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_446501.1 2995559 R 309807 CDS YP_446502.1 83815047 3852636 complement(2996888..2998069) 1 NC_007677.1 identified by match to protein family HMM PF00248; aldo/keto reductase 2998069 3852636 SRU_2403 Salinibacter ruber DSM 13855 aldo/keto reductase YP_446502.1 2996888 R 309807 CDS YP_446503.1 83814354 3851342 complement(2998066..2998701) 1 NC_007677.1 identified by match to protein family HMM PF00023; hypothetical protein 2998701 3851342 SRU_2404 Salinibacter ruber DSM 13855 hypothetical protein YP_446503.1 2998066 R 309807 CDS YP_446504.1 83816188 3851567 complement(2998747..3000936) 1 NC_007677.1 identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI 3000936 katG 3851567 katG Salinibacter ruber DSM 13855 catalase/peroxidase HPI YP_446504.1 2998747 R 309807 CDS YP_446505.1 83815584 3850765 3001124..3002032 1 NC_007677.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; redox-sensitive transcriptional activator OxyR 3002032 oxyR 3850765 oxyR Salinibacter ruber DSM 13855 redox-sensitive transcriptional activator OxyR YP_446505.1 3001124 D 309807 CDS YP_446506.1 83814775 3851705 complement(3002042..3003004) 1 NC_007677.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 3003004 3851705 SRU_2407 Salinibacter ruber DSM 13855 glycosyl transferase family protein YP_446506.1 3002042 R 309807 CDS YP_446507.1 83816748 3852555 complement(3003154..3005112) 1 NC_007677.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 3005112 gyrB 3852555 gyrB Salinibacter ruber DSM 13855 DNA gyrase subunit B YP_446507.1 3003154 R 309807 CDS YP_446508.1 83816389 3851729 3005509..3007251 1 NC_007677.1 identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 3007251 3851729 SRU_2409 Salinibacter ruber DSM 13855 glycosyl hydrolase family protein YP_446508.1 3005509 D 309807 CDS YP_446509.1 83816139 3850541 complement(3007273..3007791) 1 NC_007677.1 hypothetical protein 3007791 3850541 SRU_2410 Salinibacter ruber DSM 13855 hypothetical protein YP_446509.1 3007273 R 309807 CDS YP_446510.1 83816300 3852062 complement(3007925..3008632) 1 NC_007677.1 identified by match to protein family HMM PF00571; acetoin utilization protein 3008632 3852062 SRU_2411 Salinibacter ruber DSM 13855 acetoin utilization protein YP_446510.1 3007925 R 309807 CDS YP_446511.1 83814057 3852501 complement(3008725..3010008) 1 NC_007677.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; GTPase 3010008 3852501 SRU_2412 Salinibacter ruber DSM 13855 GTPase YP_446511.1 3008725 R 309807 CDS YP_446512.1 83815098 3850508 complement(3010335..3012533) 1 NC_007677.1 identified by match to protein family HMM PF07584; match to protein family HMM TIGR02226; hypothetical protein 3012533 3850508 SRU_2413 Salinibacter ruber DSM 13855 hypothetical protein YP_446512.1 3010335 R 309807 CDS YP_446513.1 83815525 3852335 complement(3012621..3013541) 1 NC_007677.1 identified by match to protein family HMM PF02469; beta-Ig-H3/fasciclin domain-containing protein 3013541 3852335 SRU_2414 Salinibacter ruber DSM 13855 beta-Ig-H3/fasciclin domain-containing protein YP_446513.1 3012621 R 309807 CDS YP_446514.1 83815987 3852724 complement(3013646..3016354) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; ferric enterobactin receptor 3016354 bfeA 3852724 bfeA Salinibacter ruber DSM 13855 ferric enterobactin receptor YP_446514.1 3013646 R 309807 CDS YP_446515.1 83814298 3851090 complement(3017172..3017834) 1 NC_007677.1 identified by match to protein family HMM PF01596; O-methyltransferase family protein 3017834 3851090 SRU_2416 Salinibacter ruber DSM 13855 O-methyltransferase family protein YP_446515.1 3017172 R 309807 CDS YP_446516.1 83814603 3851455 complement(3018012..3018857) 1 NC_007677.1 hypothetical protein 3018857 3851455 SRU_2417 Salinibacter ruber DSM 13855 hypothetical protein YP_446516.1 3018012 R 309807 CDS YP_446517.1 83815406 3852981 3018836..3020755 1 NC_007677.1 identified by match to protein family HMM PF00072; response regulator 3020755 3852981 SRU_2418 Salinibacter ruber DSM 13855 response regulator YP_446517.1 3018836 D 309807 CDS YP_446518.1 83815515 3852325 3020879..3021370 1 NC_007677.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 3021370 3852325 SRU_2419 Salinibacter ruber DSM 13855 hypothetical protein YP_446518.1 3020879 D 309807 CDS YP_446519.1 83814692 3853100 3021498..3022805 1 NC_007677.1 identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499; dihydrofolate synthetase 3022805 3853100 SRU_2420 Salinibacter ruber DSM 13855 dihydrofolate synthetase YP_446519.1 3021498 D 309807 CDS YP_446520.1 83816637 3852091 3022802..3024073 1 NC_007677.1 identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345; arsenite-activated ATPase ArsA 3024073 3852091 SRU_2421 Salinibacter ruber DSM 13855 arsenite-activated ATPase ArsA YP_446520.1 3022802 D 309807 CDS YP_446521.1 83815836 3851642 3024259..3025803 1 NC_007677.1 identified by match to protein family HMM PF00368; hydroxymethylglutaryl-coenzyme A reductase 3025803 3851642 SRU_2422 Salinibacter ruber DSM 13855 hydroxymethylglutaryl-coenzyme A reductase YP_446521.1 3024259 D 309807 CDS YP_446522.1 83815075 3852370 3025906..3027438 1 NC_007677.1 identified by match to protein family HMM PF00535; glucosyltransferase 3027438 3852370 SRU_2423 Salinibacter ruber DSM 13855 glucosyltransferase YP_446522.1 3025906 D 309807 CDS YP_446523.1 83816312 3851939 3027699..3028436 1 NC_007677.1 hypothetical protein 3028436 3851939 SRU_2424 Salinibacter ruber DSM 13855 hypothetical protein YP_446523.1 3027699 D 309807 CDS YP_446524.1 83815540 3852213 3028512..3029705 1 NC_007677.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3029705 anmK 3852213 anmK Salinibacter ruber DSM 13855 anhydro-N-acetylmuramic acid kinase YP_446524.1 3028512 D 309807 CDS YP_446525.1 83816052 3853162 3029854..3030936 1 NC_007677.1 identified by match to protein family HMM PF02769; match to protein family HMM TIGR01379; thiamine-monophosphate kinase 3030936 thiL 3853162 thiL Salinibacter ruber DSM 13855 thiamine-monophosphate kinase YP_446525.1 3029854 D 309807 CDS YP_446526.1 83814896 3852345 complement(3030941..3031312) 1 NC_007677.1 identified by match to protein family HMM PF01627; sensor/response hybrid 3031312 3852345 SRU_2427 Salinibacter ruber DSM 13855 sensor/response hybrid YP_446526.1 3030941 R 309807 CDS YP_446527.1 83814523 3852460 complement(3031549..3034203) 1 NC_007677.1 hypothetical protein 3034203 3852460 SRU_2428 Salinibacter ruber DSM 13855 hypothetical protein YP_446527.1 3031549 R 309807 CDS YP_446528.1 83816835 3851146 3034413..3035915 1 NC_007677.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3035915 atpD 3851146 atpD Salinibacter ruber DSM 13855 F0F1 ATP synthase subunit beta YP_446528.1 3034413 D 309807 CDS YP_446529.1 83814642 3851416 3035993..3036442 1 NC_007677.1 identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 3036442 atpC 3851416 atpC Salinibacter ruber DSM 13855 ATP synthase F1 subunit epsilon YP_446529.1 3035993 D 309807 CDS YP_446530.1 83815236 3851037 3036949..3039069 1 NC_007677.1 identified by match to protein family HMM PF00160; match to protein family HMM PF02985; match to protein family HMM PF03130; peptidyl-prolyl cis-trans isomerase domain-containing protein 3039069 3851037 SRU_2431 Salinibacter ruber DSM 13855 peptidyl-prolyl cis-trans isomerase domain-containing protein YP_446530.1 3036949 D 309807 CDS YP_446531.1 83815942 3850440 complement(3039123..3039746) 1 NC_007677.1 SoxW 3039746 3850440 SRU_2432 Salinibacter ruber DSM 13855 SoxW YP_446531.1 3039123 R 309807 CDS YP_446532.1 83816534 3852008 3039773..3040939 1 NC_007677.1 identified by match to protein family HMM PF01168; metal-activated pyridoxal enzyme 3040939 3852008 SRU_2433 Salinibacter ruber DSM 13855 metal-activated pyridoxal enzyme YP_446532.1 3039773 D 309807 CDS YP_446533.1 83815638 3850701 3041125..3042195 1 NC_007677.1 hypothetical protein 3042195 3850701 SRU_2434 Salinibacter ruber DSM 13855 hypothetical protein YP_446533.1 3041125 D 309807 CDS YP_446534.1 83815633 3850696 3042241..3042960 1 NC_007677.1 identified by match to protein family HMM PF04519; hypothetical protein 3042960 3850696 SRU_2435 Salinibacter ruber DSM 13855 hypothetical protein YP_446534.1 3042241 D 309807 CDS YP_446535.1 83814933 3850985 3042992..3044776 1 NC_007677.1 identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; tRNA nucleotidyltransferase/poly(A) polymerase family protein 3044776 3850985 SRU_2436 Salinibacter ruber DSM 13855 tRNA nucleotidyltransferase/poly(A) polymerase family protein YP_446535.1 3042992 D 309807 CDS YP_446536.1 83814325 3851528 complement(3044904..3046187) 1 NC_007677.1 identified by match to protein family HMM PF01266; anaerobic glycerol-3-phosphate dehydrogenase subunit A 3046187 glpA 3851528 glpA Salinibacter ruber DSM 13855 anaerobic glycerol-3-phosphate dehydrogenase subunit A YP_446536.1 3044904 R 309807 CDS YP_446537.1 83816471 3852838 3046474..3047427 1 NC_007677.1 hypothetical protein 3047427 3852838 SRU_2438 Salinibacter ruber DSM 13855 hypothetical protein YP_446537.1 3046474 D 309807 CDS YP_446538.1 83816083 3850563 3047408..3048097 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 3048097 3850563 SRU_2439 Salinibacter ruber DSM 13855 hypothetical protein YP_446538.1 3047408 D 309807 CDS YP_446539.1 83814819 3852385 complement(3048171..3049103) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; daunorubicin C-13 ketoreductase 3049103 3852385 SRU_2440 Salinibacter ruber DSM 13855 daunorubicin C-13 ketoreductase YP_446539.1 3048171 R 309807 CDS YP_446540.1 83816341 3851968 complement(3049557..3050924) 1 NC_007677.1 hypothetical protein 3050924 3851968 SRU_2441 Salinibacter ruber DSM 13855 hypothetical protein YP_446540.1 3049557 R 309807 CDS YP_446541.1 83815341 3853187 complement(3050958..3052901) 1 NC_007677.1 hypothetical protein 3052901 3853187 SRU_2442 Salinibacter ruber DSM 13855 hypothetical protein YP_446541.1 3050958 R 309807 CDS YP_446542.1 83815092 3850502 complement(3053097..3053702) 1 NC_007677.1 hypothetical protein 3053702 3850502 SRU_2443 Salinibacter ruber DSM 13855 hypothetical protein YP_446542.1 3053097 R 309807 CDS YP_446543.1 83816600 3853130 complement(3053710..3055455) 1 NC_007677.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; FAD binding domain-containing protein 3055455 3853130 SRU_2444 Salinibacter ruber DSM 13855 FAD binding domain-containing protein YP_446543.1 3053710 R 309807 CDS YP_446544.1 83815653 3850990 complement(3055667..3056467) 1 NC_007677.1 identified by match to protein family HMM PF00149; phosphoesterase 3056467 3850990 SRU_2445 Salinibacter ruber DSM 13855 phosphoesterase YP_446544.1 3055667 R 309807 CDS YP_446545.1 83815355 3853202 3057064..3058059 1 NC_007677.1 hypothetical protein 3058059 3853202 SRU_2446 Salinibacter ruber DSM 13855 hypothetical protein YP_446545.1 3057064 D 309807 CDS YP_446546.1 83815529 3852339 3058085..3059035 1 NC_007677.1 hypothetical protein 3059035 3852339 SRU_2447 Salinibacter ruber DSM 13855 hypothetical protein YP_446546.1 3058085 D 309807 CDS YP_446547.1 83816579 3853109 complement(3059074..3060528) 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 3060528 3853109 SRU_2448 Salinibacter ruber DSM 13855 amidohydrolase YP_446547.1 3059074 R 309807 CDS YP_446548.1 83814564 3852953 complement(3060665..3060892) 1 NC_007677.1 identified by match to protein family HMM PF00313; hypothetical protein 3060892 3852953 SRU_2449 Salinibacter ruber DSM 13855 hypothetical protein YP_446548.1 3060665 R 309807 CDS YP_446549.1 83816846 3851157 complement(3061098..3062675) 1 NC_007677.1 identified by match to protein family HMM PF00245; match to protein family HMM TIGR01409; alkaline phosphatase 3062675 3851157 SRU_2450 Salinibacter ruber DSM 13855 alkaline phosphatase YP_446549.1 3061098 R 309807 CDS YP_446550.1 83814135 3850928 complement(3062694..3063500) 1 NC_007677.1 identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein 3063500 3850928 SRU_2451 Salinibacter ruber DSM 13855 hypothetical protein YP_446550.1 3062694 R 309807 CDS YP_446551.1 83815257 3853025 complement(3063567..3064247) 1 NC_007677.1 identified by match to protein family HMM PF00005; choline transporter 3064247 proV 3853025 proV Salinibacter ruber DSM 13855 choline transporter YP_446551.1 3063567 R 309807 CDS YP_446552.1 83816002 3851654 complement(3064297..3064803) 1 NC_007677.1 identified by match to protein family HMM PF07681; hypothetical protein 3064803 3851654 SRU_2453 Salinibacter ruber DSM 13855 hypothetical protein YP_446552.1 3064297 R 309807 CDS YP_446553.1 83815879 3852537 complement(3064844..3065245) 1 NC_007677.1 identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494; crcB protein 3065245 crcB 3852537 crcB Salinibacter ruber DSM 13855 crcB protein YP_446553.1 3064844 R 309807 CDS YP_446554.1 83816670 3852671 3065333..3065611 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 3065611 3852671 SRU_2455 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_446554.1 3065333 D 309807 CDS YP_446555.1 83815080 3852376 3065575..3066051 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 3066051 3852376 SRU_2456 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_446555.1 3065575 D 309807 CDS YP_446556.1 83815930 3850428 complement(3066081..3066245) 1 NC_007677.1 hypothetical protein 3066245 3850428 SRU_2457 Salinibacter ruber DSM 13855 hypothetical protein YP_446556.1 3066081 R 309807 CDS YP_446557.1 83815295 3850961 complement(3066242..3066655) 1 NC_007677.1 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 3066655 3850961 SRU_2458 Salinibacter ruber DSM 13855 low molecular weight phosphotyrosine protein phosphatase YP_446557.1 3066242 R 309807 CDS YP_446558.1 83814683 3853091 complement(3066689..3066985) 1 NC_007677.1 hypothetical protein 3066985 3853091 SRU_2459 Salinibacter ruber DSM 13855 hypothetical protein YP_446558.1 3066689 R 309807 CDS YP_446559.1 83814686 3853094 complement(3067025..3068095) 1 NC_007677.1 identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; hypothetical protein 3068095 3853094 SRU_2460 Salinibacter ruber DSM 13855 hypothetical protein YP_446559.1 3067025 R 309807 CDS YP_446560.1 83815482 3853076 complement(3068233..3069045) 1 NC_007677.1 in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase 3069045 arsM 3853076 arsM Salinibacter ruber DSM 13855 arsenite S-adenosylmethyltransferase YP_446560.1 3068233 R 309807 CDS YP_446561.1 83814861 3851401 complement(3069051..3069389) 1 NC_007677.1 identified by match to protein family HMM PF01022; ArsR family regulatory protein 3069389 3851401 SRU_2462 Salinibacter ruber DSM 13855 ArsR family regulatory protein YP_446561.1 3069051 R 309807 CDS YP_446562.1 83814293 3851085 3069528..3070262 1 NC_007677.1 hypothetical protein 3070262 3851085 SRU_2463 Salinibacter ruber DSM 13855 hypothetical protein YP_446562.1 3069528 D 309807 CDS YP_446563.1 83815467 3853061 3070487..3071059 1 NC_007677.1 hypothetical protein 3071059 3853061 SRU_2464 Salinibacter ruber DSM 13855 hypothetical protein YP_446563.1 3070487 D 309807 CDS YP_446564.1 83814930 3850982 3071165..3071260 1 NC_007677.1 hypothetical protein 3071260 3850982 SRU_2465 Salinibacter ruber DSM 13855 hypothetical protein YP_446564.1 3071165 D 309807 CDS YP_446565.1 83814386 3851257 3071324..3072217 1 NC_007677.1 hypothetical protein 3072217 3851257 SRU_2466 Salinibacter ruber DSM 13855 hypothetical protein YP_446565.1 3071324 D 309807 CDS YP_446566.1 83815107 3852638 complement(3072229..3073428) 1 NC_007677.1 BNR repeat-containing protein 3073428 3852638 SRU_2467 Salinibacter ruber DSM 13855 BNR repeat-containing protein YP_446566.1 3072229 R 309807 CDS YP_446567.1 83814283 3850352 complement(3073488..3073748) 1 NC_007677.1 Ste20-like kinase Don3 3073748 3850352 SRU_2468 Salinibacter ruber DSM 13855 Ste20-like kinase Don3 YP_446567.1 3073488 R 309807 CDS YP_446568.1 83816323 3851950 complement(3073755..3074018) 1 NC_007677.1 hypothetical protein 3074018 3851950 SRU_2469 Salinibacter ruber DSM 13855 hypothetical protein YP_446568.1 3073755 R 309807 CDS YP_446569.1 83814820 3852386 3074174..3074668 1 NC_007677.1 hypothetical protein 3074668 3852386 SRU_2470 Salinibacter ruber DSM 13855 hypothetical protein YP_446569.1 3074174 D 309807 CDS YP_446570.1 83814730 3851484 3074675..3074920 1 NC_007677.1 hypothetical protein 3074920 3851484 SRU_2471 Salinibacter ruber DSM 13855 hypothetical protein YP_446570.1 3074675 D 309807 CDS YP_446571.1 83816775 3851203 3075217..3075972 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3075972 3851203 SRU_2473 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446571.1 3075217 D 309807 CDS YP_446572.1 83815988 3852725 3075988..3077511 1 NC_007677.1 identified by match to protein family HMM PF00528; match to protein family HMM PF04069; transmembrane protein 3077511 3852725 SRU_2474 Salinibacter ruber DSM 13855 transmembrane protein YP_446572.1 3075988 D 309807 CDS YP_446573.1 83816230 3851843 complement(3077523..3077921) 1 NC_007677.1 identified by match to protein family HMM PF05495; CHY zinc finger family protein 3077921 3851843 SRU_2475 Salinibacter ruber DSM 13855 CHY zinc finger family protein YP_446573.1 3077523 R 309807 CDS YP_446574.1 83815009 3853048 complement(3077938..3079413) 1 NC_007677.1 hypothetical protein 3079413 3853048 SRU_2476 Salinibacter ruber DSM 13855 hypothetical protein YP_446574.1 3077938 R 309807 CDS YP_446575.1 83814172 3850495 complement(3079473..3080981) 1 NC_007677.1 hypothetical protein 3080981 3850495 SRU_2477 Salinibacter ruber DSM 13855 hypothetical protein YP_446575.1 3079473 R 309807 CDS YP_446576.1 83814921 3850973 complement(3081096..3082589) 1 NC_007677.1 hypothetical protein 3082589 3850973 SRU_2478 Salinibacter ruber DSM 13855 hypothetical protein YP_446576.1 3081096 R 309807 CDS YP_446577.1 83815799 3852182 complement(3082635..3083402) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3083402 3852182 SRU_2479 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446577.1 3082635 R 309807 CDS YP_446578.1 83816357 3851853 complement(3083554..3084915) 1 NC_007677.1 hypothetical protein 3084915 3851853 SRU_2480 Salinibacter ruber DSM 13855 hypothetical protein YP_446578.1 3083554 R 309807 CDS YP_446579.1 83815099 3850509 complement(3085108..3086034) 1 NC_007677.1 identified by match to protein family HMM PF02517; AbrB family transcriptional regulator 3086034 3850509 SRU_2481 Salinibacter ruber DSM 13855 AbrB family transcriptional regulator YP_446579.1 3085108 R 309807 CDS YP_446580.1 83816014 3851666 complement(3086112..3086762) 1 NC_007677.1 hypothetical protein 3086762 3851666 SRU_2482 Salinibacter ruber DSM 13855 hypothetical protein YP_446580.1 3086112 R 309807 CDS YP_446581.1 83815588 3850769 complement(3086793..3087269) 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 3087269 3850769 SRU_2483 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_446581.1 3086793 R 309807 CDS YP_446582.1 83814425 3853009 complement(3087233..3087511) 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 3087511 3853009 SRU_2484 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_446582.1 3087233 R 309807 CDS YP_446583.1 83815745 3852753 3087668..3089173 1 NC_007677.1 identified by match to protein family HMM PF02074; carboxypeptidase 3089173 3852753 SRU_2485 Salinibacter ruber DSM 13855 carboxypeptidase YP_446583.1 3087668 D 309807 CDS YP_446584.1 83815962 3852699 complement(3089266..3090765) 1 NC_007677.1 hypothetical protein 3090765 3852699 SRU_2486 Salinibacter ruber DSM 13855 hypothetical protein YP_446584.1 3089266 R 309807 CDS YP_446585.1 83814196 3850637 complement(3090968..3092293) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor histidine kinase 3092293 3850637 SRU_2487 Salinibacter ruber DSM 13855 two-component sensor histidine kinase YP_446585.1 3090968 R 309807 CDS YP_446586.1 83814805 3852410 complement(3092596..3093333) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 3093333 drrA 3852410 drrA Salinibacter ruber DSM 13855 response regulator DrrA YP_446586.1 3092596 R 309807 CDS YP_446587.1 83815166 3850361 3093531..3094889 1 NC_007677.1 identified by similarity to GB:AAU28096.1; match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 3094889 3850361 SRU_2489 Salinibacter ruber DSM 13855 3-deoxy-7-phosphoheptulonate synthase YP_446587.1 3093531 D 309807 CDS YP_446588.1 83816165 3851544 complement(3094917..3095987) 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF05343; endoglucanase 3095987 3851544 SRU_2490 Salinibacter ruber DSM 13855 endoglucanase YP_446588.1 3094917 R 309807 CDS YP_446589.1 83816384 3851880 3096262..3096942 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 3096942 drrA 3851880 drrA Salinibacter ruber DSM 13855 response regulator DrrA YP_446589.1 3096262 D 309807 CDS YP_446590.1 83814493 3851715 complement(3096971..3097711) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; PhoP3 response regulator 3097711 3851715 SRU_2492 Salinibacter ruber DSM 13855 PhoP3 response regulator YP_446590.1 3096971 R 309807 CDS YP_446591.1 83814778 3850870 complement(3097958..3099388) 1 NC_007677.1 identified by match to protein family HMM PF01139; hypothetical protein 3099388 3850870 SRU_2493 Salinibacter ruber DSM 13855 hypothetical protein YP_446591.1 3097958 R 309807 CDS YP_446592.1 83816248 3852911 complement(3099615..3100766) 1 NC_007677.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3100766 mnmA 3852911 mnmA Salinibacter ruber DSM 13855 tRNA-specific 2-thiouridylase MnmA YP_446592.1 3099615 R 309807 CDS YP_446593.1 83814194 3850635 3100999..3101397 1 NC_007677.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 3101397 3850635 SRU_2495 Salinibacter ruber DSM 13855 endoribonuclease L-PSP YP_446593.1 3100999 D 309807 CDS YP_446594.1 83814959 3851265 complement(3101414..3102001) 1 NC_007677.1 hypothetical protein 3102001 3851265 SRU_2496 Salinibacter ruber DSM 13855 hypothetical protein YP_446594.1 3101414 R 309807 CDS YP_446595.1 83815697 3850604 complement(3102053..3103339) 1 NC_007677.1 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase-like protein 3103339 3850604 SRU_2497 Salinibacter ruber DSM 13855 N-acetylmuramoyl-L-alanine amidase-like protein YP_446595.1 3102053 R 309807 CDS YP_446596.1 83816652 3852106 complement(3103489..3104898) 1 NC_007677.1 hypothetical protein 3104898 3852106 SRU_2498 Salinibacter ruber DSM 13855 hypothetical protein YP_446596.1 3103489 R 309807 CDS YP_446597.1 83815299 3850965 complement(3104895..3105512) 1 NC_007677.1 identified by match to protein family HMM PF04542; ECF subfamily RNA polymerase sigma factor 3105512 rpoE 3850965 rpoE Salinibacter ruber DSM 13855 ECF subfamily RNA polymerase sigma factor YP_446597.1 3104895 R 309807 CDS YP_446598.1 83816047 3853157 complement(3105642..3107021) 1 NC_007677.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3107021 radA 3853157 radA Salinibacter ruber DSM 13855 DNA repair protein RadA YP_446598.1 3105642 R 309807 CDS YP_446599.1 83816537 3852011 3107258..3108010 1 NC_007677.1 identified by match to protein family HMM PF02405; hypothetical protein 3108010 3852011 SRU_2501 Salinibacter ruber DSM 13855 hypothetical protein YP_446599.1 3107258 D 309807 CDS YP_446600.1 83816229 3851842 3108077..3108847 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3108847 3851842 SRU_2502 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446600.1 3108077 D 309807 CDS YP_446601.1 83815722 3850629 3109019..3109837 1 NC_007677.1 identified by match to protein family HMM PF02470; mce related protein 3109837 3850629 SRU_2503 Salinibacter ruber DSM 13855 mce related protein YP_446601.1 3109019 D 309807 CDS YP_446602.1 83815847 3852505 3109886..3111094 1 NC_007677.1 hypothetical protein 3111094 3852505 SRU_2504 Salinibacter ruber DSM 13855 hypothetical protein YP_446602.1 3109886 D 309807 CDS YP_446603.1 83816658 3852659 3111158..3112567 1 NC_007677.1 hypothetical protein 3112567 3852659 SRU_2506 Salinibacter ruber DSM 13855 hypothetical protein YP_446603.1 3111158 D 309807 CDS YP_446604.1 83816681 3852682 complement(3112564..3113094) 1 NC_007677.1 hypothetical protein 3113094 3852682 SRU_2505 Salinibacter ruber DSM 13855 hypothetical protein YP_446604.1 3112564 R 309807 CDS YP_446605.1 83815759 3852767 complement(3113332..3114795) 1 NC_007677.1 hypothetical protein 3114795 3852767 SRU_2507 Salinibacter ruber DSM 13855 hypothetical protein YP_446605.1 3113332 R 309807 CDS YP_446606.1 83814945 3851328 3114926..3115453 1 NC_007677.1 identified by match to protein family HMM PF00571; hypothetical protein 3115453 3851328 SRU_2508 Salinibacter ruber DSM 13855 hypothetical protein YP_446606.1 3114926 D 309807 CDS YP_446607.1 83814352 3851340 3115896..3118775 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component sensor histidine kinase 3118775 3851340 SRU_2509 Salinibacter ruber DSM 13855 two-component sensor histidine kinase YP_446607.1 3115896 D 309807 CDS YP_446608.1 83814438 3850724 complement(3119146..3120702) 1 NC_007677.1 identified by similarity to SP:P42259; match to protein family HMM PF00015; match to protein family HMM PF00672; sensory rhodopsin transducer (methyl-accepting chemotaxis protein) 3120702 3850724 SRU_2510 Salinibacter ruber DSM 13855 sensory rhodopsin transducer (methyl-accepting chemotaxis protein) YP_446608.1 3119146 R 309807 CDS YP_446609.1 83814238 3852586 complement(3120759..3121478) 1 NC_007677.1 identified by similarity to SP:P33743; match to protein family HMM PF01036; sensory rhodopsin (SRI) 3121478 3852586 SRU_2511 Salinibacter ruber DSM 13855 sensory rhodopsin (SRI) YP_446609.1 3120759 R 309807 CDS YP_446610.1 83816058 3853168 complement(3121873..3124140) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two component system histidine kinase 3124140 3853168 SRU_2512 Salinibacter ruber DSM 13855 two component system histidine kinase YP_446610.1 3121873 R 309807 CDS YP_446611.1 83815506 3852316 3124666..3126540 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor/response regulator hybrid protein 3126540 3852316 SRU_2513 Salinibacter ruber DSM 13855 sensor/response regulator hybrid protein YP_446611.1 3124666 D 309807 CDS YP_446612.1 83815182 3850377 3126625..3127428 1 NC_007677.1 HD domain-containing protein 3127428 3850377 SRU_2514 Salinibacter ruber DSM 13855 HD domain-containing protein YP_446612.1 3126625 D 309807 CDS YP_446613.1 83814372 3851243 complement(3127525..3128748) 1 NC_007677.1 identified by match to protein family HMM PF01145; SPFH domain-containing protein 3128748 3851243 SRU_2515 Salinibacter ruber DSM 13855 SPFH domain-containing protein YP_446613.1 3127525 R 309807 CDS YP_446614.1 83816420 3851760 complement(3128940..3130628) 1 NC_007677.1 hypothetical protein 3130628 3851760 SRU_2516 Salinibacter ruber DSM 13855 hypothetical protein YP_446614.1 3128940 R 309807 CDS YP_446615.1 83815457 3853051 3130946..3131224 1 NC_007677.1 hypothetical protein 3131224 3853051 SRU_2517 Salinibacter ruber DSM 13855 hypothetical protein YP_446615.1 3130946 D 309807 CDS YP_446616.1 83815475 3853069 3131243..3131908 1 NC_007677.1 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase 3131908 3853069 SRU_2518 Salinibacter ruber DSM 13855 cytidine and deoxycytidylate deaminase YP_446616.1 3131243 D 309807 CDS YP_446617.1 83814729 3851483 complement(3132058..3133389) 1 NC_007677.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; NifR3 family protein 3133389 3851483 SRU_2519 Salinibacter ruber DSM 13855 NifR3 family protein YP_446617.1 3132058 R 309807 CDS YP_446618.1 83816772 3852579 3133388..3133675 1 NC_007677.1 hypothetical protein 3133675 3852579 SRU_2520 Salinibacter ruber DSM 13855 hypothetical protein YP_446618.1 3133388 D 309807 CDS YP_446619.1 83814767 3851697 3133770..3134468 1 NC_007677.1 hypothetical protein 3134468 3851697 SRU_2521 Salinibacter ruber DSM 13855 hypothetical protein YP_446619.1 3133770 D 309807 CDS YP_446620.1 83815550 3852223 3134386..3135843 1 NC_007677.1 identified by match to protein family HMM PF01663; hypothetical protein 3135843 3852223 SRU_2522 Salinibacter ruber DSM 13855 hypothetical protein YP_446620.1 3134386 D 309807 CDS YP_446621.1 83815675 3851012 complement(3135870..3136526) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3136526 3851012 SRU_2523 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446621.1 3135870 R 309807 CDS YP_446622.1 83816475 3852843 complement(3136580..3137761) 1 NC_007677.1 hypothetical protein 3137761 3852843 SRU_2524 Salinibacter ruber DSM 13855 hypothetical protein YP_446622.1 3136580 R 309807 CDS YP_446623.1 83816697 3850814 3138041..3138586 1 NC_007677.1 identified by match to protein family HMM PF04542; RNA polymerase ECF-type sigma factor 3138586 rfaY 3850814 rfaY Salinibacter ruber DSM 13855 RNA polymerase ECF-type sigma factor YP_446623.1 3138041 D 309807 CDS YP_446624.1 83814632 3851445 3138583..3139188 1 NC_007677.1 hypothetical protein 3139188 3851445 SRU_2526 Salinibacter ruber DSM 13855 hypothetical protein YP_446624.1 3138583 D 309807 CDS YP_446625.1 83816844 3851155 3139207..3140670 1 NC_007677.1 hypothetical protein 3140670 3851155 SRU_2527 Salinibacter ruber DSM 13855 hypothetical protein YP_446625.1 3139207 D 309807 CDS YP_446626.1 83814092 3850415 complement(3140809..3141597) 1 NC_007677.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 3141597 3850415 SRU_2528 Salinibacter ruber DSM 13855 Tat pathway signal sequence domain-containing protein YP_446626.1 3140809 R 309807 CDS YP_446627.1 83814874 3851414 complement(3141536..3143269) 1 NC_007677.1 identified by match to protein family HMM PF00732; GMC oxidoreductase family protein 3143269 3851414 SRU_2529 Salinibacter ruber DSM 13855 GMC oxidoreductase family protein YP_446627.1 3141536 R 309807 CDS YP_446628.1 83814766 3851696 3143296..3145491 1 NC_007677.1 identified by match to protein family HMM PF01182; match to protein family HMM PF02585; match to protein family HMM TIGR00502; glucosamine-6-phosphate deaminase 3145491 3851696 SRU_2530 Salinibacter ruber DSM 13855 glucosamine-6-phosphate deaminase YP_446628.1 3143296 D 309807 CDS YP_446629.1 83814569 3852958 3145380..3146570 1 NC_007677.1 identified by match to protein family HMM PF01261; match to protein family HMM TIGR01409; AP endonuclease 3146570 3852958 SRU_2531 Salinibacter ruber DSM 13855 AP endonuclease YP_446629.1 3145380 D 309807 CDS YP_446630.1 83816304 3852066 3147023..3148132 1 NC_007677.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 3148132 3852066 SRU_2532 Salinibacter ruber DSM 13855 Gfo/Idh/MocA family oxidoreductase YP_446630.1 3147023 D 309807 CDS YP_446631.1 83815548 3852221 3148345..3149013 1 NC_007677.1 identified by match to protein family HMM PF06439; secreted glycosyl hydrolase 3149013 3852221 SRU_2533 Salinibacter ruber DSM 13855 secreted glycosyl hydrolase YP_446631.1 3148345 D 309807 CDS YP_446632.1 83814410 3852994 3148952..3150043 1 NC_007677.1 identified by match to protein family HMM PF01408; match to protein family HMM TIGR01409; oxidoreductase 3150043 3852994 SRU_2534 Salinibacter ruber DSM 13855 oxidoreductase YP_446632.1 3148952 D 309807 CDS YP_446633.1 83814324 3851527 3149644..3150501 1 NC_007677.1 hypothetical protein 3150501 3851527 SRU_2535 Salinibacter ruber DSM 13855 hypothetical protein YP_446633.1 3149644 D 309807 CDS YP_446634.1 83816015 3851667 3150548..3151552 1 NC_007677.1 identified by match to protein family HMM PF01261; match to protein family HMM PF07582; AP endonuclease 3151552 3851667 SRU_2536 Salinibacter ruber DSM 13855 AP endonuclease YP_446634.1 3150548 D 309807 CDS YP_446635.1 83815255 3853023 complement(3151587..3151898) 1 NC_007677.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 3151898 3853023 SRU_2537 Salinibacter ruber DSM 13855 ArsR family transcriptional regulator YP_446635.1 3151587 R 309807 CDS YP_446636.1 83814091 3850414 complement(3151943..3154411) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 3154411 3850414 SRU_2538 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446636.1 3151943 R 309807 CDS YP_446637.1 83816318 3851945 complement(3154608..3155114) 1 NC_007677.1 hypothetical protein 3155114 3851945 SRU_2539 Salinibacter ruber DSM 13855 hypothetical protein YP_446637.1 3154608 R 309807 CDS YP_446638.1 83816679 3852680 complement(3155346..3156380) 1 NC_007677.1 hypothetical protein 3156380 3852680 SRU_2540 Salinibacter ruber DSM 13855 hypothetical protein YP_446638.1 3155346 R 309807 CDS YP_446639.1 83814638 3851451 complement(3156711..3158294) 1 NC_007677.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3158294 proS 3851451 proS Salinibacter ruber DSM 13855 prolyl-tRNA synthetase YP_446639.1 3156711 R 309807 CDS YP_446640.1 83815857 3852515 3158599..3159990 1 NC_007677.1 hypothetical protein 3159990 3852515 SRU_2542 Salinibacter ruber DSM 13855 hypothetical protein YP_446640.1 3158599 D 309807 CDS YP_446641.1 83816680 3852681 3160072..3161685 1 NC_007677.1 identified by match to protein family HMM PF03349; Outer membrane protein transport protein (OMPP1/FadL/TodX) 3161685 3852681 SRU_2543 Salinibacter ruber DSM 13855 Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_446641.1 3160072 D 309807 CDS YP_446642.1 83816663 3852664 complement(3161717..3162877) 1 NC_007677.1 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 3162877 3852664 SRU_2544 Salinibacter ruber DSM 13855 hypothetical protein YP_446642.1 3161717 R 309807 CDS YP_446643.1 83815851 3852509 complement(3162879..3164075) 1 NC_007677.1 identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 3164075 gcp 3852509 gcp Salinibacter ruber DSM 13855 O-sialoglycoprotein endopeptidase YP_446643.1 3162879 R 309807 CDS YP_446644.1 83816280 3852042 3164074..3164583 1 NC_007677.1 hypothetical protein 3164583 3852042 SRU_2546 Salinibacter ruber DSM 13855 hypothetical protein YP_446644.1 3164074 D 309807 CDS YP_446645.1 83814234 3852582 3164671..3165138 1 NC_007677.1 hypothetical protein 3165138 3852582 SRU_2547 Salinibacter ruber DSM 13855 hypothetical protein YP_446645.1 3164671 D 309807 CDS YP_446646.1 83814587 3851067 3165199..3165666 1 NC_007677.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 3165666 3851067 SRU_2548 Salinibacter ruber DSM 13855 hypothetical protein YP_446646.1 3165199 D 309807 CDS YP_446647.1 83815379 3850891 3165696..3166067 1 NC_007677.1 identified by match to protein family HMM PF04241; hypothetical protein 3166067 3850891 SRU_2549 Salinibacter ruber DSM 13855 hypothetical protein YP_446647.1 3165696 D 309807 CDS YP_446648.1 83814098 3850911 complement(3166104..3166463) 1 NC_007677.1 hypothetical protein 3166463 3850911 SRU_2550 Salinibacter ruber DSM 13855 hypothetical protein YP_446648.1 3166104 R 309807 CDS YP_446649.1 83815888 3851577 3166684..3167046 1 NC_007677.1 hypothetical protein 3167046 3851577 SRU_2552 Salinibacter ruber DSM 13855 hypothetical protein YP_446649.1 3166684 D 309807 CDS YP_446650.1 83814882 3851304 complement(3167012..3167782) 1 NC_007677.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoate-protein ligase B 3167782 lipB 3851304 lipB Salinibacter ruber DSM 13855 lipoate-protein ligase B YP_446650.1 3167012 R 309807 CDS YP_446651.1 83816693 3852694 complement(3167846..3175639) 1 NC_007677.1 hypothetical protein 3175639 3852694 SRU_2553 Salinibacter ruber DSM 13855 hypothetical protein YP_446651.1 3167846 R 309807 CDS YP_446652.1 83814675 3852260 complement(3175947..3177197) 1 NC_007677.1 identified by match to protein family HMM PF01408; match to protein family HMM PF03435; saccharopine dehydrogenase 3177197 lys1 3852260 lys1 Salinibacter ruber DSM 13855 saccharopine dehydrogenase YP_446652.1 3175947 R 309807 CDS YP_446653.1 83815474 3853068 complement(3177216..3177929) 1 NC_007677.1 identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR 3177929 recR 3853068 recR Salinibacter ruber DSM 13855 recombination protein RecR YP_446653.1 3177216 R 309807 CDS YP_446654.1 83816328 3851955 complement(3178025..3178561) 1 NC_007677.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 3178561 3851955 SRU_2556 Salinibacter ruber DSM 13855 hypothetical protein YP_446654.1 3178025 R 309807 CDS YP_446655.1 83814225 3850470 complement(3178539..3180725) 1 NC_007677.1 identified by match to protein family HMM PF00004; match to protein family HMM PF06144; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau 3180725 3850470 SRU_2557 Salinibacter ruber DSM 13855 DNA polymerase III subunits gamma and tau YP_446655.1 3178539 R 309807 CDS YP_446656.1 83815013 3852424 complement(3180895..3181371) 1 NC_007677.1 identified by match to protein family HMM PF06271; RDD family protein 3181371 3852424 SRU_2558 Salinibacter ruber DSM 13855 RDD family protein YP_446656.1 3180895 R 309807 CDS YP_446657.1 83815838 3851644 complement(3181714..3182397) 1 NC_007677.1 identified by match to protein family HMM PF00265; thymidine kinase 3182397 tdk 3851644 tdk Salinibacter ruber DSM 13855 thymidine kinase YP_446657.1 3181714 R 309807 CDS YP_446658.1 83816124 3850526 complement(3182573..3183223) 1 NC_007677.1 identified by match to protein family HMM PF03458; hypothetical protein 3183223 3850526 SRU_2560 Salinibacter ruber DSM 13855 hypothetical protein YP_446658.1 3182573 R 309807 CDS YP_446659.1 83816724 3850841 complement(3183248..3184444) 1 NC_007677.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily permease 3184444 3850841 SRU_2561 Salinibacter ruber DSM 13855 major facilitator superfamily permease YP_446659.1 3183248 R 309807 CDS YP_446660.1 83814975 3851184 complement(3184514..3185110) 1 NC_007677.1 identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein 3185110 3851184 SRU_2562 Salinibacter ruber DSM 13855 hypothetical protein YP_446660.1 3184514 R 309807 CDS YP_446661.1 83814436 3850722 3185351..3186253 1 NC_007677.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3186253 3850722 SRU_2563 Salinibacter ruber DSM 13855 LysR family transcriptional regulator YP_446661.1 3185351 D 309807 CDS YP_446662.1 83816634 3852088 complement(3186435..3187241) 1 NC_007677.1 hypothetical protein 3187241 3852088 SRU_2564 Salinibacter ruber DSM 13855 hypothetical protein YP_446662.1 3186435 R 309807 CDS YP_446663.1 83816013 3851665 complement(3187368..3188117) 1 NC_007677.1 batD protein 3188117 3851665 SRU_2565 Salinibacter ruber DSM 13855 batD protein YP_446663.1 3187368 R 309807 CDS YP_446664.1 83814703 3851496 complement(3188152..3189951) 1 NC_007677.1 hypothetical protein 3189951 3851496 SRU_2566 Salinibacter ruber DSM 13855 hypothetical protein YP_446664.1 3188152 R 309807 CDS YP_446665.1 83815526 3852336 complement(3190107..3190706) 1 NC_007677.1 hypothetical protein 3190706 3852336 SRU_2567 Salinibacter ruber DSM 13855 hypothetical protein YP_446665.1 3190107 R 309807 CDS YP_446666.1 83814937 3851320 complement(3190703..3191344) 1 NC_007677.1 identified by match to protein family HMM PF07719; hypothetical protein 3191344 3851320 SRU_2568 Salinibacter ruber DSM 13855 hypothetical protein YP_446666.1 3190703 R 309807 CDS YP_446667.1 83814223 3850468 complement(3191422..3192474) 1 NC_007677.1 identified by match to protein family HMM PF00092; batB protein 3192474 3850468 SRU_2569 Salinibacter ruber DSM 13855 batB protein YP_446667.1 3191422 R 309807 CDS YP_446668.1 83816834 3851145 complement(3192564..3193433) 1 NC_007677.1 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 3193433 3851145 SRU_2570 Salinibacter ruber DSM 13855 von Willebrand factor type A domain-containing protein YP_446668.1 3192564 R 309807 CDS YP_446669.1 83814798 3852403 complement(3193614..3194372) 1 NC_007677.1 identified by match to protein family HMM PF02146; Sir2 family transcriptional regulator 3194372 3852403 SRU_2571 Salinibacter ruber DSM 13855 Sir2 family transcriptional regulator YP_446669.1 3193614 R 309807 CDS YP_446670.1 83815245 3853013 complement(3194464..3195480) 1 NC_007677.1 hypothetical protein 3195480 3853013 SRU_2572 Salinibacter ruber DSM 13855 hypothetical protein YP_446670.1 3194464 R 309807 CDS YP_446671.1 83814346 3851393 complement(3195519..3196634) 1 NC_007677.1 identified by match to protein family HMM PF01882; hypothetical protein 3196634 3851393 SRU_2573 Salinibacter ruber DSM 13855 hypothetical protein YP_446671.1 3195519 R 309807 CDS YP_446672.1 83815367 3850663 complement(3196564..3198726) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor histidine kinase 3198726 3850663 SRU_2574 Salinibacter ruber DSM 13855 sensor histidine kinase YP_446672.1 3196564 R 309807 CDS YP_446673.1 83815966 3852703 3198996..3200714 1 NC_007677.1 identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-i(6)A37 thiotransferase enzyme MiaB 3200714 miaB 3852703 miaB Salinibacter ruber DSM 13855 tRNA-i(6)A37 thiotransferase enzyme MiaB YP_446673.1 3198996 D 309807 CDS YP_446674.1 83815105 3850515 3200844..3201902 1 NC_007677.1 poly-gamma-glutamate biosynthesis enzyme 3201902 3850515 SRU_2576 Salinibacter ruber DSM 13855 poly-gamma-glutamate biosynthesis enzyme YP_446674.1 3200844 D 309807 CDS YP_446675.1 83816609 3853139 3201909..3202358 1 NC_007677.1 hypothetical protein 3202358 3853139 SRU_2577 Salinibacter ruber DSM 13855 hypothetical protein YP_446675.1 3201909 D 309807 CDS YP_446676.1 83814513 3852450 3202544..3203494 1 NC_007677.1 HD domain-containing protein 3203494 3852450 SRU_2578 Salinibacter ruber DSM 13855 HD domain-containing protein YP_446676.1 3202544 D 309807 CDS YP_446677.1 83815419 3852268 3203834..3204541 1 NC_007677.1 identified by similarity to SP:P33743; match to protein family HMM PF01036; sensory rhodopsin (SRI) 3204541 3852268 SRU_2579 Salinibacter ruber DSM 13855 sensory rhodopsin (SRI) YP_446677.1 3203834 D 309807 CDS YP_446678.1 83815551 3852224 3204627..3206204 1 NC_007677.1 identified by similarity to SP:P33741; match to protein family HMM PF00015; match to protein family HMM PF00672; sensory rhodopsin I transducer (HTR-I) 3206204 htr1 3852224 htr1 Salinibacter ruber DSM 13855 sensory rhodopsin I transducer (HTR-I) YP_446678.1 3204627 D 309807 CDS YP_446679.1 83816261 3852924 complement(3206361..3207107) 1 NC_007677.1 identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-28 factor 3207107 3852924 SRU_2581 Salinibacter ruber DSM 13855 RNA polymerase sigma-28 factor YP_446679.1 3206361 R 309807 CDS YP_446680.1 83814399 3851172 complement(3207513..3208283) 1 NC_007677.1 identified by match to protein family HMM PF01656; flagellar biosynthesis protein 3208283 3851172 SRU_2582 Salinibacter ruber DSM 13855 flagellar biosynthesis protein YP_446680.1 3207513 R 309807 CDS YP_446681.1 83815021 3852433 complement(3208317..3209666) 1 NC_007677.1 hypothetical protein 3209666 3852433 SRU_2583 Salinibacter ruber DSM 13855 hypothetical protein YP_446681.1 3208317 R 309807 CDS YP_446682.1 83816721 3850838 complement(3209694..3211775) 1 NC_007677.1 identified by similarity to SP:P35620; match to protein family HMM PF00771; match to protein family HMM TIGR01398; flagellar biosynthesis protein FlhA 3211775 flhA 3850838 flhA Salinibacter ruber DSM 13855 flagellar biosynthesis protein FlhA YP_446682.1 3209694 R 309807 CDS YP_446683.1 83814498 3851720 complement(3211893..3212954) 1 NC_007677.1 identified by match to protein family HMM PF01312; flagellar biosynthetic protein flhB 3212954 3851720 SRU_2585 Salinibacter ruber DSM 13855 flagellar biosynthetic protein flhB YP_446683.1 3211893 R 309807 CDS YP_446684.1 83814762 3851692 complement(3213063..3213839) 1 NC_007677.1 identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400; flagellar biosynthetic protein FliR 3213839 fliR 3851692 fliR Salinibacter ruber DSM 13855 flagellar biosynthetic protein FliR YP_446684.1 3213063 R 309807 CDS YP_446685.1 83814167 3850490 complement(3213924..3214193) 1 NC_007677.1 identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402; flagellar biosynthetic protein FliQ 3214193 fliQ 3850490 fliQ Salinibacter ruber DSM 13855 flagellar biosynthetic protein FliQ YP_446685.1 3213924 R 309807 CDS YP_446686.1 83815985 3852722 complement(3214248..3215087) 1 NC_007677.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3215087 fliP 3852722 fliP Salinibacter ruber DSM 13855 flagellar biosynthesis protein FliP YP_446686.1 3214248 R 309807 CDS YP_446687.1 83816583 3853113 complement(3215099..3215761) 1 NC_007677.1 hypothetical protein 3215761 3853113 SRU_2589 Salinibacter ruber DSM 13855 hypothetical protein YP_446687.1 3215099 R 309807 CDS YP_446688.1 83815329 3852119 complement(3215795..3216547) 1 NC_007677.1 identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480; flagellar motor switch FliN 3216547 3852119 SRU_2590 Salinibacter ruber DSM 13855 flagellar motor switch FliN YP_446688.1 3215795 R 309807 CDS YP_446689.1 83815559 3852232 complement(3216663..3217781) 1 NC_007677.1 identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397; flagellar motor switch protein FliM 3217781 fliM 3852232 fliM Salinibacter ruber DSM 13855 flagellar motor switch protein FliM YP_446689.1 3216663 R 309807 CDS YP_446690.1 83816250 3852913 complement(3217841..3218455) 1 NC_007677.1 identified by match to protein family HMM PF03748; flagellar basal body-associated protein FliL 3218455 fliL 3852913 fliL Salinibacter ruber DSM 13855 flagellar basal body-associated protein FliL YP_446690.1 3217841 R 309807 CDS YP_446691.1 83814332 3851379 complement(3218392..3219117) 1 NC_007677.1 identified by match to protein family HMM PF00691; chemotaxis protein 3219117 3851379 SRU_2593 Salinibacter ruber DSM 13855 chemotaxis protein YP_446691.1 3218392 R 309807 CDS YP_446692.1 83815022 3852434 complement(3219193..3220014) 1 NC_007677.1 identified by match to protein family HMM PF01618; chemotaxis motA protein 3220014 motA 3852434 motA Salinibacter ruber DSM 13855 chemotaxis motA protein YP_446692.1 3219193 R 309807 CDS YP_446693.1 83816322 3851949 complement(3220141..3222174) 1 NC_007677.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 3222174 3851949 SRU_2595 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_446693.1 3220141 R 309807 CDS YP_446694.1 83814094 3850417 complement(3222147..3222827) 1 NC_007677.1 hypothetical protein 3222827 3850417 SRU_2596 Salinibacter ruber DSM 13855 hypothetical protein YP_446694.1 3222147 R 309807 CDS YP_446695.1 83816473 3852840 complement(3222953..3224752) 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis transducer 3224752 3852840 SRU_2597 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis transducer YP_446695.1 3222953 R 309807 CDS YP_446696.1 83814269 3852498 complement(3224955..3225629) 1 NC_007677.1 hypothetical protein 3225629 3852498 SRU_2598 Salinibacter ruber DSM 13855 hypothetical protein YP_446696.1 3224955 R 309807 CDS YP_446697.1 83815947 3850445 complement(3225692..3228490) 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 3228490 3850445 SRU_2599 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_446697.1 3225692 R 309807 CDS YP_446698.1 83816531 3852005 complement(3228614..3229297) 1 NC_007677.1 identified by match to protein family HMM PF01464; soluble lytic murein transglycosylase precursor 3229297 3852005 SRU_2600 Salinibacter ruber DSM 13855 soluble lytic murein transglycosylase precursor YP_446698.1 3228614 R 309807 CDS YP_446699.1 83814685 3853093 complement(3229382..3230596) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF01339; chemotaxis response regulator protein-glutamate methylesterase 3230596 3853093 SRU_2601 Salinibacter ruber DSM 13855 chemotaxis response regulator protein-glutamate methylesterase YP_446699.1 3229382 R 309807 CDS YP_446700.1 83815305 3852134 complement(3230529..3232169) 1 NC_007677.1 identified by match to protein family HMM PF01584; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis histidine kinase 3232169 cheA 3852134 cheA Salinibacter ruber DSM 13855 chemotaxis histidine kinase YP_446700.1 3230529 R 309807 CDS YP_446701.1 83815575 3850756 complement(3232517..3233551) 1 NC_007677.1 hypothetical protein 3233551 3850756 SRU_2603 Salinibacter ruber DSM 13855 hypothetical protein YP_446701.1 3232517 R 309807 CDS YP_446702.1 83816239 3852902 complement(3233560..3233961) 1 NC_007677.1 identified by match to protein family HMM PF00072; chemotaxis protein CheY 3233961 cheY 3852902 cheY Salinibacter ruber DSM 13855 chemotaxis protein CheY YP_446702.1 3233560 R 309807 CDS YP_446703.1 83816103 3850583 complement(3234000..3234878) 1 NC_007677.1 identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase 3234878 cheR 3850583 cheR Salinibacter ruber DSM 13855 chemotaxis protein methyltransferase YP_446703.1 3234000 R 309807 CDS YP_446704.1 83814312 3851515 complement(3234924..3235496) 1 NC_007677.1 identified by match to protein family HMM PF01584; purine-binding chemotaxis protein CheW 3235496 cheW 3851515 cheW Salinibacter ruber DSM 13855 purine-binding chemotaxis protein CheW YP_446704.1 3234924 R 309807 CDS YP_446705.1 83814503 3851725 complement(3235632..3236930) 1 NC_007677.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar biosynthesis cell-distal portion of basal-body rod 3236930 3851725 SRU_2607 Salinibacter ruber DSM 13855 flagellar biosynthesis cell-distal portion of basal-body rod YP_446705.1 3235632 R 309807 CDS YP_446706.1 83815125 3852656 complement(3237088..3237489) 1 NC_007677.1 identified by match to protein family HMM TIGR02530; flagellar operon protein 3237489 3852656 SRU_2608 Salinibacter ruber DSM 13855 flagellar operon protein YP_446706.1 3237088 R 309807 CDS YP_446707.1 83816116 3850518 complement(3237538..3238320) 1 NC_007677.1 identified by match to protein family HMM PF03963; basal-body rod modification protein FlgD 3238320 3850518 SRU_2609 Salinibacter ruber DSM 13855 basal-body rod modification protein FlgD YP_446707.1 3237538 R 309807 CDS YP_446708.1 83816746 3852553 complement(3238342..3238647) 1 NC_007677.1 hypothetical protein 3238647 3852553 SRU_2610 Salinibacter ruber DSM 13855 hypothetical protein YP_446708.1 3238342 R 309807 CDS YP_446709.1 83815512 3852322 complement(3238893..3240293) 1 NC_007677.1 hypothetical protein 3240293 3852322 SRU_2611 Salinibacter ruber DSM 13855 hypothetical protein YP_446709.1 3238893 R 309807 CDS YP_446710.1 83814514 3852451 complement(3240334..3240933) 1 NC_007677.1 kinesin-like protein K39 3240933 3852451 SRU_2612 Salinibacter ruber DSM 13855 kinesin-like protein K39 YP_446710.1 3240334 R 309807 CDS YP_446711.1 83815173 3850368 complement(3241032..3241586) 1 NC_007677.1 identified by match to protein family HMM TIGR02473; flagellar export protein FliJ 3241586 fliJ 3850368 fliJ Salinibacter ruber DSM 13855 flagellar export protein FliJ YP_446711.1 3241032 R 309807 CDS YP_446712.1 83816428 3852795 complement(3241675..3243003) 1 NC_007677.1 identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; flagellar protein export ATPase FliI 3243003 fliI 3852795 fliI Salinibacter ruber DSM 13855 flagellar protein export ATPase FliI YP_446712.1 3241675 R 309807 CDS YP_446713.1 83815048 3852637 complement(3243043..3244002) 1 NC_007677.1 hypothetical protein 3244002 3852637 SRU_2615 Salinibacter ruber DSM 13855 hypothetical protein YP_446713.1 3243043 R 309807 CDS YP_446714.1 83814251 3852599 complement(3244047..3245096) 1 NC_007677.1 identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207; flagellar motor switch protein FliG 3245096 fliG 3852599 fliG Salinibacter ruber DSM 13855 flagellar motor switch protein FliG YP_446714.1 3244047 R 309807 CDS YP_446715.1 83815862 3852520 complement(3245238..3246836) 1 NC_007677.1 identified by similarity to SP:P25798; match to protein family HMM PF01514; match to protein family HMM TIGR00206; flagellar M-ring protein FliF 3246836 fliF 3852520 fliF Salinibacter ruber DSM 13855 flagellar M-ring protein FliF YP_446715.1 3245238 R 309807 CDS YP_446716.1 83815432 3852281 complement(3246923..3247243) 1 NC_007677.1 identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205; flagellar hook-basal body complex protein (FliE) 3247243 fliE 3852281 fliE Salinibacter ruber DSM 13855 flagellar hook-basal body complex protein (FliE) YP_446716.1 3246923 R 309807 CDS YP_446717.1 83814641 3851454 complement(3247323..3247643) 1 NC_007677.1 hypothetical protein 3247643 3851454 SRU_2619 Salinibacter ruber DSM 13855 hypothetical protein YP_446717.1 3247323 R 309807 CDS YP_446718.1 83815671 3851008 complement(3247694..3248194) 1 NC_007677.1 identified by match to protein family HMM PF06429; match to protein family HMM TIGR01395; flagellar basal-body rod protein FlgC 3248194 flgC 3851008 flgC Salinibacter ruber DSM 13855 flagellar basal-body rod protein FlgC YP_446718.1 3247694 R 309807 CDS YP_446719.1 83814873 3851413 complement(3248241..3248654) 1 NC_007677.1 identified by match to protein family HMM PF00460; flagella basal body rod protein 3248654 3851413 SRU_2621 Salinibacter ruber DSM 13855 flagella basal body rod protein YP_446719.1 3248241 R 309807 CDS YP_446720.1 83814396 3851169 3248700..3249659 1 NC_007677.1 identified by match to protein family HMM PF02518; sensor protein 3249659 3851169 SRU_2622 Salinibacter ruber DSM 13855 sensor protein YP_446720.1 3248700 D 309807 CDS YP_446721.1 83816521 3851995 3249711..3251285 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; nitrogen regulation protein NtrC 3251285 ntrC 3851995 ntrC Salinibacter ruber DSM 13855 nitrogen regulation protein NtrC YP_446721.1 3249711 D 309807 CDS YP_446722.1 83815000 3853039 complement(3251299..3251658) 1 NC_007677.1 hypothetical protein 3251658 3853039 SRU_2624 Salinibacter ruber DSM 13855 hypothetical protein YP_446722.1 3251299 R 309807 CDS YP_446723.1 83814202 3850643 complement(3251782..3252189) 1 NC_007677.1 hypothetical protein 3252189 3850643 SRU_2625 Salinibacter ruber DSM 13855 hypothetical protein YP_446723.1 3251782 R 309807 CDS YP_446724.1 83815960 3852696 complement(3252237..3253721) 1 NC_007677.1 identified by match to protein family HMM PF07195; flagellar hook-associated protein 2 C-terminus 3253721 3852696 SRU_2626 Salinibacter ruber DSM 13855 flagellar hook-associated protein 2 C-terminus YP_446724.1 3252237 R 309807 CDS YP_446725.1 83816776 3851204 complement(3253775..3254215) 1 NC_007677.1 identified by match to protein family HMM PF02561; flagellar protein FliS 3254215 3851204 SRU_2627 Salinibacter ruber DSM 13855 flagellar protein FliS YP_446725.1 3253775 R 309807 CDS YP_446726.1 83814673 3852258 complement(3254500..3258831) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kinase/response regulator 3258831 3852258 SRU_2628 Salinibacter ruber DSM 13855 sensory box sensor histidine kinase/response regulator YP_446726.1 3254500 R 309807 CDS YP_446727.1 83814120 3851107 complement(3259286..3259780) 1 NC_007677.1 hypothetical protein 3259780 3851107 SRU_2629 Salinibacter ruber DSM 13855 hypothetical protein YP_446727.1 3259286 R 309807 CDS YP_446728.1 83815501 3852311 complement(3260144..3261388) 1 NC_007677.1 identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin 3261388 3852311 SRU_2630 Salinibacter ruber DSM 13855 flagellin YP_446728.1 3260144 R 309807 CDS YP_446729.1 83814250 3852598 complement(3261487..3262749) 1 NC_007677.1 identified by match to protein family HMM PF00669; match to protein family HMM PF00700; phase 1 flagellin 3262749 3852598 SRU_2631 Salinibacter ruber DSM 13855 phase 1 flagellin YP_446729.1 3261487 R 309807 CDS YP_446730.1 83814557 3850805 3262718..3263896 1 NC_007677.1 identified by match to protein family HMM PF00685; arylsulfotransferase 3263896 3850805 SRU_2632 Salinibacter ruber DSM 13855 arylsulfotransferase YP_446730.1 3262718 D 309807 CDS YP_446731.1 83815041 3852630 3263999..3264862 1 NC_007677.1 identified by match to protein family HMM PF00685; cytosolic phenol sulfotransferaseA1 3264862 3852630 SRU_2633 Salinibacter ruber DSM 13855 cytosolic phenol sulfotransferaseA1 YP_446731.1 3263999 D 309807 CDS YP_446732.1 83816591 3853121 3264909..3265019 1 NC_007677.1 hypothetical protein 3265019 3853121 SRU_2634 Salinibacter ruber DSM 13855 hypothetical protein YP_446732.1 3264909 D 309807 CDS YP_446733.1 83814551 3850799 complement(3265081..3266085) 1 NC_007677.1 HDIG domain-containing protein 3266085 3850799 SRU_2635 Salinibacter ruber DSM 13855 HDIG domain-containing protein YP_446733.1 3265081 R 309807 CDS YP_446734.1 83814195 3850636 complement(3266158..3267117) 1 NC_007677.1 identified by match to protein family HMM PF00669; match to protein family HMM TIGR02550; flagellar hook-associated protein 3 3267117 flgL 3850636 flgL Salinibacter ruber DSM 13855 flagellar hook-associated protein 3 YP_446734.1 3266158 R 309807 CDS YP_446735.1 83816398 3851738 complement(3267158..3268960) 1 NC_007677.1 identified by match to protein family HMM PF06429; match to protein family HMM TIGR02492; flagellar hook-associated protein FlgK 3268960 flgK 3851738 flgK Salinibacter ruber DSM 13855 flagellar hook-associated protein FlgK YP_446735.1 3267158 R 309807 CDS YP_446736.1 83816530 3852004 complement(3268977..3269519) 1 NC_007677.1 hypothetical protein 3269519 3852004 SRU_2638 Salinibacter ruber DSM 13855 hypothetical protein YP_446736.1 3268977 R 309807 CDS YP_446737.1 83815996 3852733 complement(3269503..3269844) 1 NC_007677.1 hypothetical protein 3269844 3852733 SRU_2639 Salinibacter ruber DSM 13855 hypothetical protein YP_446737.1 3269503 R 309807 CDS YP_446738.1 83814556 3850804 complement(3270057..3271157) 1 NC_007677.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3271157 flgI 3850804 flgI Salinibacter ruber DSM 13855 flagellar basal body P-ring protein YP_446738.1 3270057 R 309807 CDS YP_446739.1 83815340 3853186 complement(3271278..3271925) 1 NC_007677.1 identified by match to protein family HMM PF02107; flagellar L-ring protein FlgH 3271925 flgH 3853186 flgH Salinibacter ruber DSM 13855 flagellar L-ring protein FlgH YP_446739.1 3271278 R 309807 CDS YP_446740.1 83815670 3851007 complement(3271973..3272701) 1 NC_007677.1 hypothetical protein 3272701 3851007 SRU_2642 Salinibacter ruber DSM 13855 hypothetical protein YP_446740.1 3271973 R 309807 CDS YP_446741.1 83816512 3851986 complement(3272729..3273517) 1 NC_007677.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02488; flagellar basal-body rod protein FlgG 3273517 flgG 3851986 flgG Salinibacter ruber DSM 13855 flagellar basal-body rod protein FlgG YP_446741.1 3272729 R 309807 CDS YP_446742.1 83814111 3850924 complement(3273557..3274282) 1 NC_007677.1 identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar basal-body rod protein 3274282 flgG 3850924 flgG Salinibacter ruber DSM 13855 flagellar basal-body rod protein YP_446742.1 3273557 R 309807 CDS YP_446743.1 83816038 3853148 3274248..3275339 1 NC_007677.1 hypothetical protein 3275339 3853148 SRU_2645 Salinibacter ruber DSM 13855 hypothetical protein YP_446743.1 3274248 D 309807 CDS YP_446744.1 83815067 3851296 3275846..3278743 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 3278743 3851296 SRU_2646 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446744.1 3275846 D 309807 CDS YP_446745.1 83815124 3852655 3278806..3280293 1 NC_007677.1 hypothetical protein 3280293 3852655 SRU_2647 Salinibacter ruber DSM 13855 hypothetical protein YP_446745.1 3278806 D 309807 CDS YP_446746.1 83816803 3851231 3280381..3283245 1 NC_007677.1 identified by match to protein family HMM PF00246; deacylase/carboxypeptidase superfamily protein 3283245 3851231 SRU_2648 Salinibacter ruber DSM 13855 deacylase/carboxypeptidase superfamily protein YP_446746.1 3280381 D 309807 CDS YP_446747.1 83816136 3850538 3283249..3286062 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF07676; prolyl oligopeptidase family protein 3286062 3850538 SRU_2649 Salinibacter ruber DSM 13855 prolyl oligopeptidase family protein YP_446747.1 3283249 D 309807 CDS YP_446748.1 83816081 3850561 3286199..3287680 1 NC_007677.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; response regulatory protein 3287680 atoC 3850561 atoC Salinibacter ruber DSM 13855 response regulatory protein YP_446748.1 3286199 D 309807 CDS YP_446749.1 83815430 3852279 3287853..3288335 1 NC_007677.1 hypothetical protein 3288335 3852279 SRU_2651 Salinibacter ruber DSM 13855 hypothetical protein YP_446749.1 3287853 D 309807 CDS YP_446750.1 83814796 3850888 complement(3288340..3289275) 1 NC_007677.1 identified by match to protein family HMM PF01112; asparaginase 3289275 aspG 3850888 aspG Salinibacter ruber DSM 13855 asparaginase YP_446750.1 3288340 R 309807 CDS YP_446751.1 83814222 3850467 complement(3289527..3290807) 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase family protein 3290807 3850467 SRU_2653 Salinibacter ruber DSM 13855 3-beta hydroxysteroid dehydrogenase/isomerase family protein YP_446751.1 3289527 R 309807 CDS YP_446752.1 83815726 3850633 3290879..3291322 1 NC_007677.1 identified by match to protein family HMM TIGR02293; hypothetical protein 3291322 3850633 SRU_2654 Salinibacter ruber DSM 13855 hypothetical protein YP_446752.1 3290879 D 309807 CDS YP_446753.1 83814784 3850876 3291377..3291871 1 NC_007677.1 hypothetical protein 3291871 3850876 SRU_2655 Salinibacter ruber DSM 13855 hypothetical protein YP_446753.1 3291377 D 309807 CDS YP_446754.1 83814563 3850811 3292053..3294317 1 NC_007677.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR01736; phosphoribosylformylglycinamidine synthase II 3294317 purL 3850811 purL Salinibacter ruber DSM 13855 phosphoribosylformylglycinamidine synthase II YP_446754.1 3292053 D 309807 CDS YP_446755.1 83816367 3851863 3294573..3294917 1 NC_007677.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 3294917 trx 3851863 trx Salinibacter ruber DSM 13855 thioredoxin YP_446755.1 3294573 D 309807 CDS YP_446756.1 83815356 3853203 3295089..3296207 1 NC_007677.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 3296207 trxB 3853203 trxB Salinibacter ruber DSM 13855 thioredoxin-disulfide reductase YP_446756.1 3295089 D 309807 CDS YP_446757.1 83815049 3851278 3296230..3296826 1 NC_007677.1 identified by match to protein family HMM PF01476; match to protein family HMM PF04972; N-acetylmuramoyl-L-alanine amidase 3296826 3851278 SRU_2659 Salinibacter ruber DSM 13855 N-acetylmuramoyl-L-alanine amidase YP_446757.1 3296230 D 309807 CDS YP_446758.1 83816666 3852667 3296955..3298988 1 NC_007677.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 3298988 ggt 3852667 ggt Salinibacter ruber DSM 13855 gamma-glutamyltransferase YP_446758.1 3296955 D 309807 CDS YP_446759.1 83815893 3851583 complement(3299070..3299420) 1 NC_007677.1 hypothetical protein 3299420 3851583 SRU_2661 Salinibacter ruber DSM 13855 hypothetical protein YP_446759.1 3299070 R 309807 CDS YP_446760.1 83815377 3850673 complement(3299504..3299992) 1 NC_007677.1 hypothetical protein 3299992 3850673 SRU_2662 Salinibacter ruber DSM 13855 hypothetical protein YP_446760.1 3299504 R 309807 CDS YP_446761.1 83814715 3851508 complement(3299989..3302199) 1 NC_007677.1 identified by match to protein family HMM PF07721; hypothetical protein 3302199 3851508 SRU_2663 Salinibacter ruber DSM 13855 hypothetical protein YP_446761.1 3299989 R 309807 CDS YP_446762.1 83815391 3850903 3302298..3303203 1 NC_007677.1 identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase 3303203 3850903 SRU_2664 Salinibacter ruber DSM 13855 CDP-alcohol phosphatidyltransferase YP_446762.1 3302298 D 309807 CDS YP_446763.1 83814620 3851472 3303262..3305046 1 NC_007677.1 hypothetical protein 3305046 3851472 SRU_2665 Salinibacter ruber DSM 13855 hypothetical protein YP_446763.1 3303262 D 309807 CDS YP_446764.1 83816296 3852058 complement(3305054..3306127) 1 NC_007677.1 identified by match to protein family HMM PF00534; glycoside hydrolase 3306127 3852058 SRU_2666 Salinibacter ruber DSM 13855 glycoside hydrolase YP_446764.1 3305054 R 309807 CDS YP_446765.2 161986638 3851064 3306244..3307017 1 NC_007677.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 3307017 3851064 SRU_2667 Salinibacter ruber DSM 13855 hypothetical protein YP_446765.2 3306244 D 309807 CDS YP_446766.1 83816429 3852796 3307074..3307613 1 NC_007677.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3307613 ruvC 3852796 ruvC Salinibacter ruber DSM 13855 Holliday junction resolvase YP_446766.1 3307074 D 309807 CDS YP_446767.1 83814760 3851690 complement(3307672..3307947) 1 NC_007677.1 hypothetical protein 3307947 3851690 SRU_2669 Salinibacter ruber DSM 13855 hypothetical protein YP_446767.1 3307672 R 309807 CDS YP_446768.1 83814153 3850946 3308056..3308511 1 NC_007677.1 hypothetical protein 3308511 3850946 SRU_2670 Salinibacter ruber DSM 13855 hypothetical protein YP_446768.1 3308056 D 309807 CDS YP_446769.1 83814984 3851193 3308685..3309635 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3309635 3851193 SRU_2671 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446769.1 3308685 D 309807 CDS YP_446770.1 83814278 3850347 3309559..3310992 1 NC_007677.1 hypothetical protein 3310992 3850347 SRU_2672 Salinibacter ruber DSM 13855 hypothetical protein YP_446770.1 3309559 D 309807 CDS YP_446771.1 83816587 3853117 3311275..3312663 1 NC_007677.1 identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 3312663 tig 3853117 tig Salinibacter ruber DSM 13855 trigger factor YP_446771.1 3311275 D 309807 CDS YP_446772.1 83815964 3852701 3312685..3313503 1 NC_007677.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3313503 clpP 3852701 clpP Salinibacter ruber DSM 13855 ATP-dependent Clp protease proteolytic subunit YP_446772.1 3312685 D 309807 CDS YP_446773.1 83815316 3852145 3314064..3315092 1 NC_007677.1 identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase domain-containing protein 3315092 3852145 SRU_2676 Salinibacter ruber DSM 13855 peptidyl-prolyl cis-trans isomerase domain-containing protein YP_446773.1 3314064 D 309807 CDS YP_446774.1 83816392 3851732 complement(3315167..3315736) 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 3315736 3851732 SRU_2677 Salinibacter ruber DSM 13855 acetyltransferase YP_446774.1 3315167 R 309807 CDS YP_446775.1 83816566 3851910 3315723..3316391 1 NC_007677.1 identified by match to protein family HMM PF01966; HD domain-containing protein 3316391 3851910 SRU_2678 Salinibacter ruber DSM 13855 HD domain-containing protein YP_446775.1 3315723 D 309807 CDS YP_446776.1 83815020 3852432 3316540..3317115 1 NC_007677.1 hypothetical protein 3317115 3852432 SRU_2679 Salinibacter ruber DSM 13855 hypothetical protein YP_446776.1 3316540 D 309807 CDS YP_446777.1 83814143 3850936 3317190..3318377 1 NC_007677.1 hypothetical protein 3318377 3850936 SRU_2680 Salinibacter ruber DSM 13855 hypothetical protein YP_446777.1 3317190 D 309807 CDS YP_446778.1 83816199 3851812 3318427..3319191 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 3319191 3851812 SRU_2681 Salinibacter ruber DSM 13855 NAD-dependent epimerase/dehydratase family protein YP_446778.1 3318427 D 309807 CDS YP_446779.1 83816126 3850528 complement(3319239..3320045) 1 NC_007677.1 identified by match to protein family HMM PF00561; 3-oxoadipate enol-lactone hydrolase 3320045 3850528 SRU_2682 Salinibacter ruber DSM 13855 3-oxoadipate enol-lactone hydrolase YP_446779.1 3319239 R 309807 CDS YP_446780.1 83815234 3851035 3320268..3320786 1 NC_007677.1 identified by match to protein family HMM PF07879; regulator for granule-associated proteins 3320786 3851035 SRU_2683 Salinibacter ruber DSM 13855 regulator for granule-associated proteins YP_446780.1 3320268 D 309807 CDS YP_446781.1 83814457 3852198 3320831..3321256 1 NC_007677.1 protein PhaF 3321256 3852198 SRU_2684 Salinibacter ruber DSM 13855 protein PhaF YP_446781.1 3320831 D 309807 CDS YP_446782.1 83815239 3851040 3321353..3322735 1 NC_007677.1 identified by match to protein family HMM PF01734; patatin family phospholipase 3322735 3851040 SRU_2685 Salinibacter ruber DSM 13855 patatin family phospholipase YP_446782.1 3321353 D 309807 CDS YP_446783.1 83814434 3850720 complement(3322743..3324572) 1 NC_007677.1 identified by match to protein family HMM PF03109; ubiquinone biosynthesis protein 3324572 3850720 SRU_2686 Salinibacter ruber DSM 13855 ubiquinone biosynthesis protein YP_446783.1 3322743 R 309807 CDS YP_446784.1 83814968 3851274 3330613..3331506 1 NC_007677.1 identified by match to protein family HMM PF03793; protein PASTA domain-containing protein 3331506 3851274 SRU_2692 Salinibacter ruber DSM 13855 protein PASTA domain-containing protein YP_446784.1 3330613 D 309807 CDS YP_446785.1 83815532 3852342 complement(3331691..3332317) 1 NC_007677.1 identified by match to protein family HMM PF00156; pyrimidine operon regulatory protein 3332317 3852342 SRU_2693 Salinibacter ruber DSM 13855 pyrimidine operon regulatory protein YP_446785.1 3331691 R 309807 CDS YP_446786.1 83814508 3852445 complement(3332750..3333982) 1 NC_007677.1 identified by match to protein family HMM PF01344; match to protein family HMM PF07646; hypothetical protein 3333982 3852445 SRU_2694 Salinibacter ruber DSM 13855 hypothetical protein YP_446786.1 3332750 R 309807 CDS YP_446787.1 83815291 3850957 3334178..3335362 1 NC_007677.1 identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase 3335362 hemH 3850957 hemH Salinibacter ruber DSM 13855 ferrochelatase YP_446787.1 3334178 D 309807 CDS YP_446788.1 83815707 3850614 complement(3335423..3336385) 1 NC_007677.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 3336385 3850614 SRU_2696 Salinibacter ruber DSM 13855 endonuclease/exonuclease/phosphatase family protein YP_446788.1 3335423 R 309807 CDS YP_446789.1 83815679 3851016 3336517..3337113 1 NC_007677.1 hypothetical protein 3337113 3851016 SRU_2698 Salinibacter ruber DSM 13855 hypothetical protein YP_446789.1 3336517 D 309807 CDS YP_446790.1 83816525 3851999 complement(3337083..3337766) 1 NC_007677.1 identified by match to protein family HMM PF00691; OmpA family protein 3337766 3851999 SRU_2697 Salinibacter ruber DSM 13855 OmpA family protein YP_446790.1 3337083 R 309807 CDS YP_446791.1 83816488 3852857 complement(3337805..3338710) 1 NC_007677.1 identified by match to protein family HMM PF04018; hypothetical protein 3338710 3852857 SRU_2699 Salinibacter ruber DSM 13855 hypothetical protein YP_446791.1 3337805 R 309807 CDS YP_446792.1 83814061 3852465 complement(3338786..3340450) 1 NC_007677.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721; hypothetical protein 3340450 3852465 SRU_2700 Salinibacter ruber DSM 13855 hypothetical protein YP_446792.1 3338786 R 309807 CDS YP_446793.1 83814827 3852393 3340394..3341059 1 NC_007677.1 identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 3341059 tmk 3852393 tmk Salinibacter ruber DSM 13855 thymidylate kinase YP_446793.1 3340394 D 309807 CDS YP_446794.1 83814583 3851063 3341148..3341690 1 NC_007677.1 identified by match to protein family HMM PF01475; ferric uptake regulation protein 3341690 3851063 SRU_2702 Salinibacter ruber DSM 13855 ferric uptake regulation protein YP_446794.1 3341148 D 309807 CDS YP_446795.1 83814859 3851399 complement(3341891..3342427) 1 NC_007677.1 hypothetical protein 3342427 3851399 SRU_2703 Salinibacter ruber DSM 13855 hypothetical protein YP_446795.1 3341891 R 309807 CDS YP_446796.1 83815804 3852187 3342582..3343406 1 NC_007677.1 identified by match to protein family HMM PF00924; small-conductance mechanosensitive channel 3343406 3852187 SRU_2705 Salinibacter ruber DSM 13855 small-conductance mechanosensitive channel YP_446796.1 3342582 D 309807 CDS YP_446797.1 83816393 3851733 complement(3343403..3343879) 1 NC_007677.1 identified by match to protein family HMM PF03400; ISSru3, transposase insB 3343879 3851733 SRU_2704 Salinibacter ruber DSM 13855 ISSru3, transposase insB YP_446797.1 3343403 R 309807 CDS YP_446798.1 83815004 3853043 complement(3343843..3344121) 1 NC_007677.1 identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 3344121 3853043 SRU_2706 Salinibacter ruber DSM 13855 ISSru3, transposase insA YP_446798.1 3343843 R 309807 CDS YP_446799.1 83815241 3851042 3344199..3344504 1 NC_007677.1 transmembrane protein 3344504 3851042 SRU_2707 Salinibacter ruber DSM 13855 transmembrane protein YP_446799.1 3344199 D 309807 CDS YP_446800.1 83815883 3851572 complement(3344530..3345495) 1 NC_007677.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate decarboxylase 3345495 3851572 SRU_2708 Salinibacter ruber DSM 13855 UDP-glucuronate decarboxylase YP_446800.1 3344530 R 309807 CDS YP_446801.1 83816802 3851230 complement(3345544..3346932) 1 NC_007677.1 identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; nucleotide sugar dehydrogenase 3346932 3851230 SRU_2709 Salinibacter ruber DSM 13855 nucleotide sugar dehydrogenase YP_446801.1 3345544 R 309807 CDS YP_446802.1 83816550 3851894 complement(3347607..3348257) 1 NC_007677.1 hypothetical protein 3348257 3851894 SRU_2710 Salinibacter ruber DSM 13855 hypothetical protein YP_446802.1 3347607 R 309807 CDS YP_446803.1 83814748 3851366 complement(3348338..3350647) 1 NC_007677.1 thiol:disulfide interchange protein DsbD 3350647 3851366 SRU_2711 Salinibacter ruber DSM 13855 thiol:disulfide interchange protein DsbD YP_446803.1 3348338 R 309807 CDS YP_446804.1 83814644 3851418 3351650..3351961 1 NC_007677.1 hypothetical protein 3351961 3851418 SRU_2712 Salinibacter ruber DSM 13855 hypothetical protein YP_446804.1 3351650 D 309807 CDS YP_446805.1 83816207 3851820 3352306..3355503 1 NC_007677.1 identified by match to protein family HMM PF00028; cadherin domain-containing protein 3355503 3851820 SRU_2713 Salinibacter ruber DSM 13855 cadherin domain-containing protein YP_446805.1 3352306 D 309807 CDS YP_446806.1 83814622 3851435 complement(3355701..3357107) 1 NC_007677.1 hypothetical protein 3357107 3851435 SRU_2714 Salinibacter ruber DSM 13855 hypothetical protein YP_446806.1 3355701 R 309807 CDS YP_446807.1 83815496 3852306 complement(3357441..3358211) 1 NC_007677.1 identified by match to protein family HMM PF04952; succinylglutamate desuccinylase/aspartoacylase family protein 3358211 3852306 SRU_2715 Salinibacter ruber DSM 13855 succinylglutamate desuccinylase/aspartoacylase family protein YP_446807.1 3357441 R 309807 CDS YP_446808.1 83814480 3851799 complement(3358239..3358559) 1 NC_007677.1 antibiotic biosynthesis monooxygenase domain-containing protein 3358559 3851799 SRU_2716 Salinibacter ruber DSM 13855 antibiotic biosynthesis monooxygenase domain-containing protein YP_446808.1 3358239 R 309807 CDS YP_446809.1 83815232 3851033 complement(3358662..3360329) 1 NC_007677.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug resistance protein NorM 3360329 3851033 SRU_2717 Salinibacter ruber DSM 13855 multidrug resistance protein NorM YP_446809.1 3358662 R 309807 CDS YP_446810.1 83816007 3851659 3360447..3361415 1 NC_007677.1 hypothetical protein 3361415 3851659 SRU_2718 Salinibacter ruber DSM 13855 hypothetical protein YP_446810.1 3360447 D 309807 CDS YP_446811.1 83816832 3851142 complement(3361747..3362466) 1 NC_007677.1 hypothetical protein 3362466 3851142 SRU_2719 Salinibacter ruber DSM 13855 hypothetical protein YP_446811.1 3361747 R 309807 CDS YP_446812.1 83816021 3851673 complement(3362397..3365276) 1 NC_007677.1 identified by match to protein family HMM PF00326; acylaminoacyl-peptidase 3365276 3851673 SRU_2720 Salinibacter ruber DSM 13855 acylaminoacyl-peptidase YP_446812.1 3362397 R 309807 CDS YP_446813.1 83815777 3852160 complement(3365345..3366565) 1 NC_007677.1 identified by match to protein family HMM PF00144; beta-lactamase 3366565 3852160 SRU_2721 Salinibacter ruber DSM 13855 beta-lactamase YP_446813.1 3365345 R 309807 CDS YP_446814.1 83816399 3851739 complement(3366708..3367175) 1 NC_007677.1 hypothetical protein 3367175 3851739 SRU_2722 Salinibacter ruber DSM 13855 hypothetical protein YP_446814.1 3366708 R 309807 CDS YP_446815.1 83814212 3850653 complement(3367213..3367743) 1 NC_007677.1 hypothetical protein 3367743 3850653 SRU_2723 Salinibacter ruber DSM 13855 hypothetical protein YP_446815.1 3367213 R 309807 CDS YP_446816.1 83816499 3852868 complement(3367768..3369252) 1 NC_007677.1 lipoprotein 3369252 3852868 SRU_2724 Salinibacter ruber DSM 13855 lipoprotein YP_446816.1 3367768 R 309807 CDS YP_446817.1 83814128 3851115 3369377..3370516 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; two-component system sensor protein 3370516 3851115 SRU_2725 Salinibacter ruber DSM 13855 two-component system sensor protein YP_446817.1 3369377 D 309807 CDS YP_446818.1 83814904 3852353 3370494..3371246 1 NC_007677.1 identified by match to protein family HMM PF00072; LytTr DNA-binding domain-containing protein 3371246 3852353 SRU_2726 Salinibacter ruber DSM 13855 LytTr DNA-binding domain-containing protein YP_446818.1 3370494 D 309807 CDS YP_446819.1 83816799 3851227 3371378..3373498 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for transport of vitamin B 3373498 3851227 SRU_2727 Salinibacter ruber DSM 13855 outer membrane receptor for transport of vitamin B YP_446819.1 3371378 D 309807 CDS YP_446820.1 83814727 3851481 3374011..3375186 1 NC_007677.1 identified by match to protein family HMM PF01497; similar to agr_c_4467p; hemin-binding periplasmic protein hmut 3375186 3851481 SRU_2728 Salinibacter ruber DSM 13855 hemin-binding periplasmic protein hmut YP_446820.1 3374011 D 309807 CDS YP_446821.1 83815203 3851784 3375193..3376350 1 NC_007677.1 identified by match to protein family HMM PF01032; hemin ABC transporter permease 3376350 3851784 SRU_2729 Salinibacter ruber DSM 13855 hemin ABC transporter permease YP_446821.1 3375193 D 309807 CDS YP_446822.1 83815661 3850998 3376542..3377678 1 NC_007677.1 identified by match to protein family HMM PF00595; match to protein family HMM PF01546; match to protein family HMM PF04389; match to protein family HMM PF05450; aminopeptidase 3377678 3850998 SRU_2730 Salinibacter ruber DSM 13855 aminopeptidase YP_446822.1 3376542 D 309807 CDS YP_446823.1 83816786 3851214 3377782..3378603 1 NC_007677.1 identified by match to protein family HMM PF00005; hemin ABC transporter ATP-binding protein 3378603 3851214 SRU_2731 Salinibacter ruber DSM 13855 hemin ABC transporter ATP-binding protein YP_446823.1 3377782 D 309807 CDS YP_446824.1 83814562 3850810 3378625..3379692 1 NC_007677.1 identified by match to protein family HMM PF05171; hemin-degrading family protein 3379692 3850810 SRU_2732 Salinibacter ruber DSM 13855 hemin-degrading family protein YP_446824.1 3378625 D 309807 CDS YP_446825.1 83816727 3850844 3379751..3380173 1 NC_007677.1 hypothetical protein 3380173 3850844 SRU_2733 Salinibacter ruber DSM 13855 hypothetical protein YP_446825.1 3379751 D 309807 CDS YP_446826.1 83816086 3850566 3380410..3380898 1 NC_007677.1 hypothetical protein 3380898 3850566 SRU_2734 Salinibacter ruber DSM 13855 hypothetical protein YP_446826.1 3380410 D 309807 CDS YP_446827.1 83814756 3851374 complement(3380961..3383465) 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 3383465 3851374 SRU_2735 Salinibacter ruber DSM 13855 TonB-dependent receptor domain-containing protein YP_446827.1 3380961 R 309807 CDS YP_446828.1 83816507 3851981 3383464..3385869 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3385869 3851981 SRU_2736 Salinibacter ruber DSM 13855 hypothetical protein YP_446828.1 3383464 D 309807 CDS YP_446829.1 83816548 3851892 3385915..3386880 1 NC_007677.1 hypothetical protein 3386880 3851892 SRU_2737 Salinibacter ruber DSM 13855 hypothetical protein YP_446829.1 3385915 D 309807 CDS YP_446830.1 83815913 3851603 complement(3386918..3387799) 1 NC_007677.1 hypothetical protein 3387799 3851603 SRU_2738 Salinibacter ruber DSM 13855 hypothetical protein YP_446830.1 3386918 R 309807 CDS YP_446831.1 83816552 3851896 3388051..3389475 1 NC_007677.1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801; 3-oxoacyl-(acyl-carrier-protein) synthase II 3389475 fabF 3851896 fabF Salinibacter ruber DSM 13855 3-oxoacyl-(acyl-carrier-protein) synthase II YP_446831.1 3388051 D 309807 CDS YP_446832.1 83816402 3851742 3389563..3389973 1 NC_007677.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 3389973 3851742 SRU_2740 Salinibacter ruber DSM 13855 thioesterase family protein YP_446832.1 3389563 D 309807 CDS YP_446833.1 83816006 3851658 3390010..3390960 1 NC_007677.1 identified by match to protein family HMM PF00903; glyoxalase family protein 3390960 3851658 SRU_2741 Salinibacter ruber DSM 13855 glyoxalase family protein YP_446833.1 3390010 D 309807 CDS YP_446834.1 83814844 3852781 3390996..3391652 1 NC_007677.1 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 3391652 3852781 SRU_2742 Salinibacter ruber DSM 13855 phospholipase/carboxylesterase YP_446834.1 3390996 D 309807 CDS YP_446835.1 83814446 3850732 3391669..3393111 1 NC_007677.1 identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 3393111 3850732 SRU_2743 Salinibacter ruber DSM 13855 glycosyl hydrolase family protein YP_446835.1 3391669 D 309807 CDS YP_446836.1 83816841 3851152 complement(3393684..3395132) 1 NC_007677.1 hypothetical protein 3395132 3851152 SRU_2744 Salinibacter ruber DSM 13855 hypothetical protein YP_446836.1 3393684 R 309807 CDS YP_446837.1 83815267 3851048 complement(3395529..3398006) 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' 3398006 priA 3851048 priA Salinibacter ruber DSM 13855 primosomal protein N' YP_446837.1 3395529 R 309807 CDS YP_446838.1 83816408 3851748 complement(3398112..3398954) 1 NC_007677.1 hypothetical protein 3398954 3851748 SRU_2746 Salinibacter ruber DSM 13855 hypothetical protein YP_446838.1 3398112 R 309807 CDS YP_446839.1 83815480 3853074 complement(3398905..3401442) 1 NC_007677.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM TIGR01970; ATP-dependent helicase HrpB 3401442 hrpB 3853074 hrpB Salinibacter ruber DSM 13855 ATP-dependent helicase HrpB YP_446839.1 3398905 R 309807 CDS YP_446840.1 83815127 3852934 complement(3401680..3402330) 1 NC_007677.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; haloacid dehalogenase-like hydrolase 3402330 3852934 SRU_2748 Salinibacter ruber DSM 13855 haloacid dehalogenase-like hydrolase YP_446840.1 3401680 R 309807 CDS YP_446841.1 83814618 3851470 3402384..3405203 1 NC_007677.1 hypothetical protein 3405203 3851470 SRU_2749 Salinibacter ruber DSM 13855 hypothetical protein YP_446841.1 3402384 D 309807 CDS YP_446842.1 83816190 3851569 complement(3405279..3405797) 1 NC_007677.1 periplasmic efflux protein 3405797 3851569 SRU_2750 Salinibacter ruber DSM 13855 periplasmic efflux protein YP_446842.1 3405279 R 309807 CDS YP_446843.1 83815409 3852984 complement(3406023..3407639) 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 3407639 3852984 SRU_2751 Salinibacter ruber DSM 13855 outer membrane efflux protein YP_446843.1 3406023 R 309807 CDS YP_446844.1 83814938 3851321 3407668..3407958 1 NC_007677.1 hypothetical protein 3407958 3851321 SRU_2752 Salinibacter ruber DSM 13855 hypothetical protein YP_446844.1 3407668 D 309807 CDS YP_446845.1 83814161 3850484 complement(3407980..3409239) 1 NC_007677.1 identified by match to protein family HMM PF00109; match to protein family HMM PF02801; 3-oxoacyl-(acyl-carrier-protein) synthase II 3409239 fabF 3850484 fabF Salinibacter ruber DSM 13855 3-oxoacyl-(acyl-carrier-protein) synthase II YP_446845.1 3407980 R 309807 CDS YP_446846.1 83816104 3850584 complement(3409376..3409612) 1 NC_007677.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3409612 acpP 3850584 acpP Salinibacter ruber DSM 13855 acyl carrier protein YP_446846.1 3409376 R 309807 CDS YP_446847.1 83815303 3852132 3409999..3411159 1 NC_007677.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3411159 metK 3852132 metK Salinibacter ruber DSM 13855 S-adenosylmethionine synthetase YP_446847.1 3409999 D 309807 CDS YP_446848.1 83814311 3851514 3411374..3412057 1 NC_007677.1 hypothetical protein 3412057 3851514 SRU_2756 Salinibacter ruber DSM 13855 hypothetical protein YP_446848.1 3411374 D 309807 CDS YP_446849.1 83816703 3850820 3412337..3412909 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase ECF-type sigma factor 3412909 sigW 3850820 sigW Salinibacter ruber DSM 13855 RNA polymerase ECF-type sigma factor YP_446849.1 3412337 D 309807 CDS YP_446850.1 83815469 3853063 3412890..3413588 1 NC_007677.1 identified by match to protein family HMM PF02922; isoamylase N-terminal domain-containing protein 3413588 3853063 SRU_2758 Salinibacter ruber DSM 13855 isoamylase N-terminal domain-containing protein YP_446850.1 3412890 D 309807 CDS YP_446851.1 83815302 3852131 3413595..3414827 1 NC_007677.1 hypothetical protein 3414827 3852131 SRU_2759 Salinibacter ruber DSM 13855 hypothetical protein YP_446851.1 3413595 D 309807 CDS YP_446852.1 83816125 3850527 3414787..3415860 1 NC_007677.1 hypothetical protein 3415860 3850527 SRU_2760 Salinibacter ruber DSM 13855 hypothetical protein YP_446852.1 3414787 D 309807 CDS YP_446853.1 83814617 3851469 complement(3415880..3417091) 1 NC_007677.1 identified by match to protein family HMM PF01112; asparaginase 3417091 asg 3851469 asg Salinibacter ruber DSM 13855 asparaginase YP_446853.1 3415880 R 309807 CDS YP_446854.1 83815412 3852987 3417405..3417983 1 NC_007677.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; extracytoplasmic function alternative sigma factor 3417983 3852987 SRU_2762 Salinibacter ruber DSM 13855 extracytoplasmic function alternative sigma factor YP_446854.1 3417405 D 309807 CDS YP_446855.1 83815542 3852215 complement(3418477..3418650) 1 NC_007677.1 hypothetical protein 3418650 3852215 SRU_2763 Salinibacter ruber DSM 13855 hypothetical protein YP_446855.1 3418477 R 309807 CDS YP_446856.1 83816303 3852065 complement(3418701..3420533) 1 NC_007677.1 identified by match to protein family HMM PF00271; helicase domain-containing protein 3420533 3852065 SRU_2764 Salinibacter ruber DSM 13855 helicase domain-containing protein YP_446856.1 3418701 R 309807 CDS YP_446857.1 83815102 3850512 complement(3420657..3423476) 1 NC_007677.1 identified by match to protein family HMM PF00326; match to protein family HMM PF00930; X-Pro dipeptidyl-peptidase 3423476 3850512 SRU_2765 Salinibacter ruber DSM 13855 X-Pro dipeptidyl-peptidase YP_446857.1 3420657 R 309807 CDS YP_446858.1 83815505 3852315 complement(3423563..3424456) 1 NC_007677.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 3424456 menB 3852315 menB Salinibacter ruber DSM 13855 naphthoate synthase YP_446858.1 3423563 R 309807 CDS YP_446859.1 83815843 3851649 complement(3424526..3425623) 1 NC_007677.1 hypothetical protein 3425623 3851649 SRU_2767 Salinibacter ruber DSM 13855 hypothetical protein YP_446859.1 3424526 R 309807 CDS YP_446860.1 83816256 3852919 3425678..3427084 1 NC_007677.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 3427084 3852919 SRU_2768 Salinibacter ruber DSM 13855 hydroxyglutarate oxidase YP_446860.1 3425678 D 309807 CDS YP_446861.1 83814774 3851704 3427193..3427753 1 NC_007677.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; match to protein family HMM TIGR01926; peroxidase-related protein 3427753 3851704 SRU_2769 Salinibacter ruber DSM 13855 peroxidase-related protein YP_446861.1 3427193 D 309807 CDS YP_446862.1 83814700 3851493 3427903..3428778 1 NC_007677.1 hypothetical protein 3428778 3851493 SRU_2770 Salinibacter ruber DSM 13855 hypothetical protein YP_446862.1 3427903 D 309807 CDS YP_446863.1 83816618 3852072 3428832..3429590 1 NC_007677.1 hypothetical protein 3429590 3852072 SRU_2771 Salinibacter ruber DSM 13855 hypothetical protein YP_446863.1 3428832 D 309807 CDS YP_446864.1 83815998 3851650 3430685..3431689 1 NC_007677.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase 3431689 3851650 SRU_2772 Salinibacter ruber DSM 13855 IS110 family transposase YP_446864.1 3430685 D 309807 CDS YP_446865.1 83814526 3852601 3431807..3432439 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3432439 3852601 SRU_2773 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_446865.1 3431807 D 309807 CDS YP_446866.1 83814281 3850350 3432574..3433098 1 NC_007677.1 identified by match to protein family HMM PF02627; hypothetical protein 3433098 pcaC 3850350 pcaC Salinibacter ruber DSM 13855 hypothetical protein YP_446866.1 3432574 D 309807 CDS YP_446867.1 83816490 3852859 3433112..3434035 1 NC_007677.1 identified by match to protein family HMM PF01625; methionine sulfoxide reductase 3434035 3852859 SRU_2775 Salinibacter ruber DSM 13855 methionine sulfoxide reductase YP_446867.1 3433112 D 309807 CDS YP_446868.1 83815577 3850758 3434058..3434834 1 NC_007677.1 identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide methionine sulfoxide reductase 3434834 3850758 SRU_2776 Salinibacter ruber DSM 13855 peptide methionine sulfoxide reductase YP_446868.1 3434058 D 309807 CDS YP_446869.1 83814171 3850494 complement(3434858..3436291) 1 NC_007677.1 identified by match to protein family HMM PF03553; Na+/H+ antiporter 3436291 3850494 SRU_2777 Salinibacter ruber DSM 13855 Na+/H+ antiporter YP_446869.1 3434858 R 309807 CDS YP_446870.1 83815338 3852128 complement(3436379..3437065) 1 NC_007677.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase family oxidoreductase 3437065 3852128 SRU_2778 Salinibacter ruber DSM 13855 short chain dehydrogenase/reductase family oxidoreductase YP_446870.1 3436379 R 309807 CDS YP_446871.1 83816147 3850549 3437463..3439091 1 NC_007677.1 identified by match to protein family HMM PF00474; sodium:solute symporter family protein 3439091 3850549 SRU_2779 Salinibacter ruber DSM 13855 sodium:solute symporter family protein YP_446871.1 3437463 D 309807 CDS YP_446872.1 83814666 3852251 3439239..3439988 1 NC_007677.1 identified by similarity to SP:P33742; match to protein family HMM PF01036; halorhodopsin (HR) 3439988 3852251 SRU_2780 Salinibacter ruber DSM 13855 halorhodopsin (HR) YP_446872.1 3439239 D 309807 CDS YP_446873.1 83815120 3852651 3440115..3440864 1 NC_007677.1 identified by similarity to PIR:G84171; match to protein family HMM PF00106; oxidoreductase 3440864 3852651 SRU_2781 Salinibacter ruber DSM 13855 oxidoreductase YP_446873.1 3440115 D 309807 CDS YP_446874.1 83815903 3851593 complement(3440900..3441268) 1 NC_007677.1 identified by similarity to GB:CAD79090.1; hypothetical protein 3441268 3851593 SRU_2782 Salinibacter ruber DSM 13855 hypothetical protein YP_446874.1 3440900 R 309807 CDS YP_446875.1 83815645 3850709 3441563..3443056 1 NC_007677.1 identified by match to protein family HMM PF05761; match to protein family HMM TIGR02244; HAD family hydrolase 5'-nucleotidase 3443056 3850709 SRU_2783 Salinibacter ruber DSM 13855 HAD family hydrolase 5'-nucleotidase YP_446875.1 3441563 D 309807 CDS YP_446876.1 83814292 3851084 complement(3443202..3444371) 1 NC_007677.1 identified by match to protein family HMM PF00146; NADH dehydrogenase i, h subunit 3444371 nuoH 3851084 nuoH Salinibacter ruber DSM 13855 NADH dehydrogenase i, h subunit YP_446876.1 3443202 R 309807 CDS YP_446877.1 83815084 3852380 complement(3444426..3445082) 1 NC_007677.1 hypothetical protein 3445082 3852380 SRU_2785 Salinibacter ruber DSM 13855 hypothetical protein YP_446877.1 3444426 R 309807 CDS YP_446878.1 83815483 3853077 complement(3445313..3446002) 1 NC_007677.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3446002 3853077 SRU_2786 Salinibacter ruber DSM 13855 TetR family transcriptional regulator YP_446878.1 3445313 R 309807 CDS YP_446879.1 83816298 3852060 3446368..3447768 1 NC_007677.1 identified by match to protein family HMM PF00291; cysteine synthase B 3447768 3852060 SRU_2787 Salinibacter ruber DSM 13855 cysteine synthase B YP_446879.1 3446368 D 309807 CDS YP_446880.1 83814903 3852352 complement(3447954..3448643) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component response regulator 3448643 3852352 SRU_2788 Salinibacter ruber DSM 13855 two-component response regulator YP_446880.1 3447954 R 309807 CDS YP_446881.1 83814124 3851111 complement(3449275..3450036) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family DNA-binding response regulator 3450036 3851111 SRU_2789 Salinibacter ruber DSM 13855 LuxR family DNA-binding response regulator YP_446881.1 3449275 R 309807 CDS YP_446882.1 83815853 3852511 complement(3450194..3450895) 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; response regulator receiver:histidine kinase 3450895 3852511 SRU_2790 Salinibacter ruber DSM 13855 response regulator receiver:histidine kinase YP_446882.1 3450194 R 309807 CDS YP_446883.1 83815758 3852766 complement(3451404..3452003) 1 NC_007677.1 identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 3452003 coaE 3852766 coaE Salinibacter ruber DSM 13855 dephospho-CoA kinase YP_446883.1 3451404 R 309807 CDS YP_446884.1 83814645 3851419 complement(3452100..3452492) 1 NC_007677.1 identified by match to protein family HMM PF01230; HIT-like protein 3452492 3851419 SRU_2792 Salinibacter ruber DSM 13855 HIT-like protein YP_446884.1 3452100 R 309807 CDS YP_446885.1 83816687 3852688 3452703..3453116 1 NC_007677.1 identified by match to protein family HMM PF01242; 6-pyruvoyl-tetrahydropterin synthase 3453116 3852688 SRU_2793 Salinibacter ruber DSM 13855 6-pyruvoyl-tetrahydropterin synthase YP_446885.1 3452703 D 309807 CDS YP_446886.1 83815479 3853073 3453226..3453825 1 NC_007677.1 identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063; GTP cyclohydrolase I 3453825 folE 3853073 folE Salinibacter ruber DSM 13855 GTP cyclohydrolase I YP_446886.1 3453226 D 309807 CDS YP_446887.1 83815401 3852976 3453909..3454607 1 NC_007677.1 identified by match to protein family HMM PF00106; oxidoreductase 3454607 3852976 SRU_2795 Salinibacter ruber DSM 13855 oxidoreductase YP_446887.1 3453909 D 309807 CDS YP_446888.1 83814403 3851176 complement(3454615..3455130) 1 NC_007677.1 hypothetical protein 3455130 3851176 SRU_2796 Salinibacter ruber DSM 13855 hypothetical protein YP_446888.1 3454615 R 309807 CDS YP_446889.1 83815878 3852536 3455382..3455933 1 NC_007677.1 identified by match to protein family HMM TIGR02447; thioesterase domain-containing protein 3455933 3852536 SRU_2797 Salinibacter ruber DSM 13855 thioesterase domain-containing protein YP_446889.1 3455382 D 309807 CDS YP_446890.1 83816672 3852673 complement(3455937..3456617) 1 NC_007677.1 identified by match to protein family HMM PF00583; acetyltransferase 3456617 3852673 SRU_2798 Salinibacter ruber DSM 13855 acetyltransferase YP_446890.1 3455937 R 309807 CDS YP_446891.1 83815436 3850733 3456667..3457785 1 NC_007677.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; acetylornithine deacetylase 3457785 3850733 SRU_2799 Salinibacter ruber DSM 13855 acetylornithine deacetylase YP_446891.1 3456667 D 309807 CDS YP_446892.1 83814646 3851420 complement(3457796..3458464) 1 NC_007677.1 identified by similarity to SP:P32679; match to protein family HMM PF04493; endonuclease V 3458464 nfi 3851420 nfi Salinibacter ruber DSM 13855 endonuclease V YP_446892.1 3457796 R 309807 CDS YP_446893.1 83816191 3851570 3458810..3460894 1 NC_007677.1 identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonyl-tRNA synthetase 3460894 thrS 3851570 thrS Salinibacter ruber DSM 13855 threonyl-tRNA synthetase YP_446893.1 3458810 D 309807 CDS YP_446894.1 83815747 3852755 3461133..3461594 1 NC_007677.1 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 3461594 infC 3852755 infC Salinibacter ruber DSM 13855 translation initiation factor IF-3 YP_446894.1 3461133 D 309807 CDS YP_446895.1 83814993 3853032 3461613..3461960 1 NC_007677.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; hypothetical protein 3461960 3853032 SRU_2804 Salinibacter ruber DSM 13855 hypothetical protein YP_446895.1 3461613 D 309807 CDS YP_446896.1 83814381 3851252 3462117..3462464 1 NC_007677.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3462464 rplT 3851252 rplT Salinibacter ruber DSM 13855 50S ribosomal protein L20 YP_446896.1 3462117 D 309807 CDS YP_446897.1 83815886 3851575 3462777..3463787 1 NC_007677.1 identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 3463787 pheS 3851575 pheS Salinibacter ruber DSM 13855 phenylalanyl-tRNA synthetase subunit alpha YP_446897.1 3462777 D 309807 CDS YP_446898.1 83815262 3853030 3463924..3466416 1 NC_007677.1 identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 3466416 pheT 3853030 pheT Salinibacter ruber DSM 13855 phenylalanyl-tRNA synthetase subunit beta YP_446898.1 3463924 D 309807 CDS YP_446899.1 83816838 3851149 3466589..3467086 1 NC_007677.1 dopamine receptor D4 3467086 3851149 SRU_2808 Salinibacter ruber DSM 13855 dopamine receptor D4 YP_446899.1 3466589 D 309807 CDS YP_446900.1 83816561 3851905 3467181..3467480 1 NC_007677.1 hypothetical protein 3467480 3851905 SRU_2809 Salinibacter ruber DSM 13855 hypothetical protein YP_446900.1 3467181 D 309807 CDS YP_446901.1 83816450 3852817 3467544..3469553 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3469553 3852817 SRU_2810 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446901.1 3467544 D 309807 CDS YP_446902.1 83815644 3850708 3469661..3470914 1 NC_007677.1 hypothetical protein 3470914 3850708 SRU_2811 Salinibacter ruber DSM 13855 hypothetical protein YP_446902.1 3469661 D 309807 CDS YP_446903.1 83814888 3851310 complement(3471034..3472197) 1 NC_007677.1 identified by match to protein family HMM PF00704; chitinase A1 3472197 3851310 SRU_2812 Salinibacter ruber DSM 13855 chitinase A1 YP_446903.1 3471034 R 309807 CDS YP_446904.1 83816287 3852049 complement(3472261..3473430) 1 NC_007677.1 identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein 3473430 3852049 SRU_2813 Salinibacter ruber DSM 13855 Tat pathway signal sequence domain-containing protein YP_446904.1 3472261 R 309807 CDS YP_446905.1 83816152 3850554 complement(3473599..3475323) 1 NC_007677.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase family protein 3475323 3850554 SRU_2814 Salinibacter ruber DSM 13855 amidohydrolase family protein YP_446905.1 3473599 R 309807 CDS YP_446906.1 83815344 3853190 3475468..3475698 1 NC_007677.1 identified by match to protein family HMM TIGR02609; addiction module antidote 3475698 3853190 SRU_2815 Salinibacter ruber DSM 13855 addiction module antidote YP_446906.1 3475468 D 309807 CDS YP_446907.1 83814568 3852957 3475717..3476094 1 NC_007677.1 identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death on curing protein 3476094 3852957 SRU_2816 Salinibacter ruber DSM 13855 death on curing protein YP_446907.1 3475717 D 309807 CDS YP_446908.1 83816630 3852084 3476075..3480202 1 NC_007677.1 hypothetical protein 3480202 3852084 SRU_2817 Salinibacter ruber DSM 13855 hypothetical protein YP_446908.1 3476075 D 309807 CDS YP_446909.1 83815428 3852277 complement(3480353..3480946) 1 NC_007677.1 cytochrome c biogenesis protein, thiol:disulfide interchange protein 3480946 ccmG 3852277 ccmG Salinibacter ruber DSM 13855 cytochrome c biogenesis protein, thiol:disulfide interchange protein YP_446909.1 3480353 R 309807 CDS YP_446910.1 83815854 3852512 complement(3481003..3481731) 1 NC_007677.1 thioredoxin 3481731 3852512 SRU_2819 Salinibacter ruber DSM 13855 thioredoxin YP_446910.1 3481003 R 309807 CDS YP_446911.1 83816335 3851962 3482183..3483292 1 NC_007677.1 identified by match to protein family HMM PF01170; match to protein family HMM PF02926; THUMP domain/methyltransferase domain-containing protein 3483292 3851962 SRU_2820 Salinibacter ruber DSM 13855 THUMP domain/methyltransferase domain-containing protein YP_446911.1 3482183 D 309807 CDS YP_446912.1 83814606 3851458 3483419..3485254 1 NC_007677.1 identified by match to protein family HMM PF05960; X-Pro dipeptidyl-peptidase 3485254 3851458 SRU_2821 Salinibacter ruber DSM 13855 X-Pro dipeptidyl-peptidase YP_446912.1 3483419 D 309807 CDS YP_446913.1 83814208 3850649 complement(3485357..3485968) 1 NC_007677.1 hypothetical protein 3485968 3850649 SRU_2822 Salinibacter ruber DSM 13855 hypothetical protein YP_446913.1 3485357 R 309807 CDS YP_446914.1 83814835 3852401 3486421..3488265 1 NC_007677.1 identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 3488265 3852401 SRU_2823 Salinibacter ruber DSM 13855 methyl-accepting chemotaxis protein YP_446914.1 3486421 D 309807 CDS YP_446915.1 83815694 3850601 3488914..3490200 1 NC_007677.1 identified by match to protein family HMM PF02321; cobalt-zinc-cadmium outer membrane resistance protein 3490200 3850601 SRU_2824 Salinibacter ruber DSM 13855 cobalt-zinc-cadmium outer membrane resistance protein YP_446915.1 3488914 D 309807 CDS YP_446916.1 83816479 3852848 3490298..3491407 1 NC_007677.1 identified by match to protein family HMM TIGR01730; cation efflux system protein CzcB-like protein 3491407 3852848 SRU_2825 Salinibacter ruber DSM 13855 cation efflux system protein CzcB-like protein YP_446916.1 3490298 D 309807 CDS YP_446917.1 83816012 3851664 3491404..3494730 1 NC_007677.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; cation efflux system protein czcA 3494730 3851664 SRU_2826 Salinibacter ruber DSM 13855 cation efflux system protein czcA YP_446917.1 3491404 D 309807 CDS YP_446918.1 83816129 3850531 3494759..3495097 1 NC_007677.1 identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 3495097 3850531 SRU_2827 Salinibacter ruber DSM 13855 nitrogen regulatory protein P-II YP_446918.1 3494759 D 309807 CDS YP_446919.1 83815388 3850900 3495154..3495648 1 NC_007677.1 hypothetical protein 3495648 3850900 SRU_2828 Salinibacter ruber DSM 13855 hypothetical protein YP_446919.1 3495154 D 309807 CDS YP_446920.1 83815859 3852517 3495764..3496207 1 NC_007677.1 identified by match to protein family HMM TIGR01409; high-potential iron-sulfur protein 3496207 3852517 SRU_2829 Salinibacter ruber DSM 13855 high-potential iron-sulfur protein YP_446920.1 3495764 D 309807 CDS YP_446921.1 83816273 3852035 3496425..3497168 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 3497168 3852035 SRU_2830 Salinibacter ruber DSM 13855 response regulator receiver domain-containing protein YP_446921.1 3496425 D 309807 CDS YP_446922.1 83814653 3851427 3497168..3498673 1 NC_007677.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor histidine kinase 3498673 3851427 SRU_2831 Salinibacter ruber DSM 13855 two-component sensor histidine kinase YP_446922.1 3497168 D 309807 CDS YP_446923.1 83815037 3852626 3499217..3501148 1 NC_007677.1 identified by match to protein family HMM PF00015; match to protein family HMM PF01590; GAF domain-containing protein 3501148 3852626 SRU_2832 Salinibacter ruber DSM 13855 GAF domain-containing protein YP_446923.1 3499217 D 309807 CDS YP_446924.1 83815749 3852757 complement(3501267..3503957) 1 NC_007677.1 identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; ATP-dependent chaperone protein ClpB 3503957 clpB 3852757 clpB Salinibacter ruber DSM 13855 ATP-dependent chaperone protein ClpB YP_446924.1 3501267 R 309807 CDS YP_446925.1 83816656 3852657 3504347..3505006 1 NC_007677.1 polyhydroxyalkanoate granule-associated protein PhaF 3505006 3852657 SRU_2835 Salinibacter ruber DSM 13855 polyhydroxyalkanoate granule-associated protein PhaF YP_446925.1 3504347 D 309807 CDS YP_446926.1 83815823 3851629 3505487..3506080 1 NC_007677.1 hypothetical protein 3506080 3851629 SRU_2837 Salinibacter ruber DSM 13855 hypothetical protein YP_446926.1 3505487 D 309807 CDS YP_446927.1 83816379 3851875 complement(3506077..3507882) 1 NC_007677.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 3507882 3851875 SRU_2836 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein/permease YP_446927.1 3506077 R 309807 CDS YP_446928.1 83814660 3851434 3508068..3508544 1 NC_007677.1 hypothetical protein 3508544 3851434 SRU_2838 Salinibacter ruber DSM 13855 hypothetical protein YP_446928.1 3508068 D 309807 CDS YP_446929.1 83815296 3850962 3508737..3509732 1 NC_007677.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 3509732 rbsR 3850962 rbsR Salinibacter ruber DSM 13855 ribose operon repressor YP_446929.1 3508737 D 309807 CDS YP_446930.1 83815729 3852737 3509872..3511413 1 NC_007677.1 identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Na+/solute symporter 3511413 3852737 SRU_2840 Salinibacter ruber DSM 13855 Na+/solute symporter YP_446930.1 3509872 D 309807 CDS YP_446931.1 83816220 3851833 3511699..3514743 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3514743 3851833 SRU_2841 Salinibacter ruber DSM 13855 hypothetical protein YP_446931.1 3511699 D 309807 CDS YP_446932.1 83814174 3850851 3514826..3516361 1 NC_007677.1 identified by match to protein family HMM PF07980; hypothetical protein 3516361 3850851 SRU_2842 Salinibacter ruber DSM 13855 hypothetical protein YP_446932.1 3514826 D 309807 CDS YP_446933.1 83816059 3853169 3516412..3517368 1 NC_007677.1 hypothetical protein 3517368 3853169 SRU_2843 Salinibacter ruber DSM 13855 hypothetical protein YP_446933.1 3516412 D 309807 CDS YP_446934.1 83816589 3853119 3517423..3518538 1 NC_007677.1 identified by match to protein family HMM PF00722; match to protein family HMM PF00801; beta-glucanase precursor 3518538 3853119 SRU_2844 Salinibacter ruber DSM 13855 beta-glucanase precursor YP_446934.1 3517423 D 309807 CDS YP_446935.1 83814445 3850731 3518734..3521334 1 NC_007677.1 identified by match to protein family HMM PF00933; match to protein family HMM PF01915; xylosidase 3521334 xloA 3850731 xloA Salinibacter ruber DSM 13855 xylosidase YP_446935.1 3518734 D 309807 CDS YP_446936.1 83815310 3852139 3521487..3523016 1 NC_007677.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; sugar transporter subfamily protein 3523016 3852139 SRU_2846 Salinibacter ruber DSM 13855 sugar transporter subfamily protein YP_446936.1 3521487 D 309807 CDS YP_446937.1 83814307 3851099 complement(3523069..3525600) 1 NC_007677.1 hypothetical protein 3525600 3851099 SRU_2847 Salinibacter ruber DSM 13855 hypothetical protein YP_446937.1 3523069 R 309807 CDS YP_446938.1 83816277 3852039 complement(3525659..3526522) 1 NC_007677.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3526522 3852039 SRU_2848 Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446938.1 3525659 R 309807 CDS YP_446939.1 83815478 3853072 complement(3526547..3527944) 1 NC_007677.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane fusion efflux protein 3527944 3853072 SRU_2849 Salinibacter ruber DSM 13855 membrane fusion efflux protein YP_446939.1 3526547 R 309807 CDS YP_446940.1 83814978 3851187 complement(3527963..3529375) 1 NC_007677.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 3529375 3851187 SRU_2850 Salinibacter ruber DSM 13855 outer membrane efflux protein YP_446940.1 3527963 R 309807 CDS YP_446941.1 83814240 3852588 complement(3529424..3530644) 1 NC_007677.1 identified by match to protein family HMM PF02687; ABC transporter permease 3530644 3852588 SRU_2851 Salinibacter ruber DSM 13855 ABC transporter permease YP_446941.1 3529424 R 309807 CDS YP_446942.1 83816734 3852541 complement(3530696..3531940) 1 NC_007677.1 identified by match to protein family HMM PF02687; ABC transporter ATP-binding protein 3531940 ybjZ 3852541 ybjZ Salinibacter ruber DSM 13855 ABC transporter ATP-binding protein YP_446942.1 3530696 R 309807 CDS YP_446943.1 83814719 3851512 3532072..3533817 1 NC_007677.1 hypothetical protein 3533817 3851512 SRU_2853 Salinibacter ruber DSM 13855 hypothetical protein YP_446943.1 3532072 D 309807 CDS YP_446944.1 83815642 3850705 complement(3534178..3534543) 1 NC_007677.1 hypothetical protein 3534543 3850705 SRU_2854 Salinibacter ruber DSM 13855 hypothetical protein YP_446944.1 3534178 R 309807 CDS YP_446945.1 83815925 3850423 complement(3534595..3535563) 1 NC_007677.1 identified by match to protein family HMM PF00072; match to protein family HMM PF04397; two-component system response regulator protein 3535563 3850423 SRU_2855 Salinibacter ruber DSM 13855 two-component system response regulator protein YP_446945.1 3534595 R 309807 CDS YP_446946.1 83815779 3852162 complement(3535488..3536759) 1 NC_007677.1 identified by match to protein family HMM PF02518; match to protein family HMM PF06580; transmembrane sensor histidine kinase transcription regulator protein 3536759 3852162 SRU_2856 Salinibacter ruber DSM 13855 transmembrane sensor histidine kinase transcription regulator protein YP_446946.1 3535488 R 309807 CDS YP_446947.1 83814833 3852399 complement(3537092..3538612) 1 NC_007677.1 identified by match to protein family HMM PF00801; PKD domain-containing protein 3538612 3852399 SRU_2858 Salinibacter ruber DSM 13855 PKD domain-containing protein YP_446947.1 3537092 R 309807 CDS YP_446948.1 83816556 3851900 3539082..3542237 1 NC_007677.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3542237 3851900 SRU_2859 Salinibacter ruber DSM 13855 hypothetical protein YP_446948.1 3539082 D 309807 CDS YP_446949.1 83816397 3851737 3542292..3543809 1 NC_007677.1 hypothetical protein 3543809 3851737 SRU_2860 Salinibacter ruber DSM 13855 hypothetical protein YP_446949.1 3542292 D 309807 CDS YP_446950.1 83816161 3851540 3543994..3544806 1 NC_007677.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 3544806 3851540 SRU_2861 Salinibacter ruber DSM 13855 endonuclease/exonuclease/phosphatase family protein YP_446950.1 3543994 D 309807 CDS YP_446951.1 83815123 3852654 complement(3544894..3545013) 1 NC_007677.1 hypothetical protein 3545013 3852654 SRU_2862 Salinibacter ruber DSM 13855 hypothetical protein YP_446951.1 3544894 R 309807 CDS YP_446952.1 83814201 3850642 3545373..3546410 1 NC_007677.1 hypothetical protein 3546410 3850642 SRU_2863 Salinibacter ruber DSM 13855 hypothetical protein YP_446952.1 3545373 D 309807 CDS YP_446953.1 83816714 3850831 complement(3546444..3547022) 1 NC_007677.1 hypothetical protein 3547022 3850831 SRU_2864 Salinibacter ruber DSM 13855 hypothetical protein YP_446953.1 3546444 R 309807 CDS YP_446954.1 83816528 3852002 3547254..3548141 1 NC_007677.1 hypothetical protein 3548141 3852002 SRU_2865 Salinibacter ruber DSM 13855 hypothetical protein YP_446954.1 3547254 D 309807 CDS YP_446955.1 83816640 3852094 3548159..3548656 1 NC_007677.1 hypothetical protein 3548656 3852094 SRU_2866 Salinibacter ruber DSM 13855 hypothetical protein YP_446955.1 3548159 D 309807 CDS YP_446956.1 83815848 3852506 3548671..3549036 1 NC_007677.1 hypothetical protein 3549036 3852506 SRU_2867 Salinibacter ruber DSM 13855 hypothetical protein YP_446956.1 3548671 D 309807 CDS YP_446957.1 83815211 3852292 3549101..3550285 1 NC_007677.1 identified by match to protein family HMM PF00903; ABC transporter substrate-binding protein 3550285 3852292 SRU_2868 Salinibacter ruber DSM 13855 ABC transporter substrate-binding protein YP_446957.1 3549101 D 309807 CDS YP_446958.1 83814724 3851478 3550378..3550788 1 NC_007677.1 hypothetical protein 3550788 3851478 SRU_2869 Salinibacter ruber DSM 13855 hypothetical protein YP_446958.1 3550378 D 309807 CDS YP_446959.1 83814737 3851491 complement(3550875..3551351) 1 NC_007677.1 hypothetical protein 3551351 3851491 SRU_2870 Salinibacter ruber DSM 13855 hypothetical protein YP_446959.1 3550875 R 309807 CDS YP_446960.1 83816884 3853231 1..1011 1 NC_007678.1 identified by match to protein family HMM PF01051; initiator replication protein RepB 1011 repB 3853231 repB Salinibacter ruber DSM 13855 initiator replication protein RepB YP_446960.1 1 D 309807 CDS YP_446961.1 83816880 3853227 1500..2798 1 NC_007678.1 identified by match to protein family HMM PF00817; umuC protein 2798 3853227 SRU_p0002 Salinibacter ruber DSM 13855 umuC protein YP_446961.1 1500 D 309807 CDS YP_446962.1 83816872 3853219 3022..6297 1 NC_007678.1 identified by match to protein family HMM PF00041; match to protein family HMM PF03382; match to protein family HMM TIGR02167; transmembrane protein, putative 6297 3853219 SRU_p0003 Salinibacter ruber DSM 13855 transmembrane protein, putative YP_446962.1 3022 D 309807 CDS YP_446963.1 83816885 3853232 6325..7497 1 NC_007678.1 identified by similarity to GB:CAD32945.1; match to protein family HMM PF00041; cellulose 1,4-beta-cellobiosidase-like protein 7497 3853232 SRU_p0004 Salinibacter ruber DSM 13855 cellulose 1,4-beta-cellobiosidase-like protein YP_446963.1 6325 D 309807 CDS YP_446964.1 83816867 3853214 complement(7538..7954) 1 NC_007678.1 identified by match to protein family HMM PF01609; ISSru1, transposase orfB 7954 3853214 SRU_p0005 Salinibacter ruber DSM 13855 ISSru1, transposase orfB YP_446964.1 7538 R 309807 CDS YP_446965.1 83816868 3853215 complement(8790..9026) 1 NC_007678.1 hypothetical protein 9026 3853215 SRU_p0007 Salinibacter ruber DSM 13855 hypothetical protein YP_446965.1 8790 R 309807 CDS YP_446966.1 83816860 3853207 complement(9341..9481) 1 NC_007678.1 identified by similarity to GB:CAE25950.1; tyrosine recombinase XerD 9481 xerD 3853207 xerD Salinibacter ruber DSM 13855 tyrosine recombinase XerD YP_446966.1 9341 R 309807 CDS YP_446967.1 83816869 3853216 9991..10449 1 NC_007678.1 hypothetical protein 10449 3853216 SRU_p0009 Salinibacter ruber DSM 13855 hypothetical protein YP_446967.1 9991 D 309807 CDS YP_446968.1 83816882 3853229 10560..11018 1 NC_007678.1 hypothetical protein 11018 3853229 SRU_p0010 Salinibacter ruber DSM 13855 hypothetical protein YP_446968.1 10560 D 309807 CDS YP_446969.1 83816861 3853208 complement(11163..11738) 1 NC_007678.1 identified by match to protein family HMM PF00589; match to protein family HMM TIGR02224; match to protein family HMM TIGR02225; phage integrase family site specific recombinase 11738 3853208 SRU_p0011 Salinibacter ruber DSM 13855 phage integrase family site specific recombinase YP_446969.1 11163 R 309807 CDS YP_446970.1 83816862 3853209 12254..14605 1 NC_007678.1 identified by match to protein family HMM PF07581; GLUG domain-containing protein 14605 3853209 SRU_p0012 Salinibacter ruber DSM 13855 GLUG domain-containing protein YP_446970.1 12254 D 309807 CDS YP_446971.1 83816886 3853233 complement(14839..15792) 1 NC_007678.1 hypothetical protein 15792 3853233 SRU_p0013 Salinibacter ruber DSM 13855 hypothetical protein YP_446971.1 14839 R 309807 CDS YP_446972.1 83816865 3853212 complement(15870..16826) 1 NC_007678.1 hypothetical protein 16826 3853212 SRU_p0014 Salinibacter ruber DSM 13855 hypothetical protein YP_446972.1 15870 R 309807 CDS YP_446973.1 83816864 3853211 complement(16921..17715) 1 NC_007678.1 hypothetical protein 17715 3853211 SRU_p0015 Salinibacter ruber DSM 13855 hypothetical protein YP_446973.1 16921 R 309807 CDS YP_446974.1 83816866 3853213 complement(17749..17982) 1 NC_007678.1 hypothetical protein 17982 3853213 SRU_p0016 Salinibacter ruber DSM 13855 hypothetical protein YP_446974.1 17749 R 309807 CDS YP_446975.1 83816858 3853205 18011..19828 1 NC_007678.1 hypothetical protein 19828 3853205 SRU_p0017 Salinibacter ruber DSM 13855 hypothetical protein YP_446975.1 18011 D 309807 CDS YP_446976.1 83816859 3853206 19847..20131 1 NC_007678.1 hypothetical protein 20131 3853206 SRU_p0018 Salinibacter ruber DSM 13855 hypothetical protein YP_446976.1 19847 D 309807 CDS YP_446977.1 83816883 3853230 complement(20271..20942) 1 NC_007678.1 putative lipoprotein 20942 3853230 SRU_p0019 Salinibacter ruber DSM 13855 putative lipoprotein YP_446977.1 20271 R 309807 CDS YP_446978.1 83816879 3853226 complement(21091..21360) 1 NC_007678.1 hypothetical protein 21360 3853226 SRU_p0020 Salinibacter ruber DSM 13855 hypothetical protein YP_446978.1 21091 R 309807 CDS YP_446979.1 83816874 3853221 complement(21488..22285) 1 NC_007678.1 hypothetical protein 22285 3853221 SRU_p0021 Salinibacter ruber DSM 13855 hypothetical protein YP_446979.1 21488 R 309807 CDS YP_446980.1 83816876 3853223 complement(22302..22661) 1 NC_007678.1 hypothetical protein 22661 3853223 SRU_p0022 Salinibacter ruber DSM 13855 hypothetical protein YP_446980.1 22302 R 309807 CDS YP_446981.1 83816875 3853222 22683..22955 1 NC_007678.1 hypothetical protein 22955 3853222 SRU_p0023 Salinibacter ruber DSM 13855 hypothetical protein YP_446981.1 22683 D 309807 CDS YP_446982.1 83816863 3853210 22981..23487 1 NC_007678.1 hypothetical protein 23487 3853210 SRU_p0024 Salinibacter ruber DSM 13855 hypothetical protein YP_446982.1 22981 D 309807 CDS YP_446983.1 83816881 3853228 complement(23582..24088) 1 NC_007678.1 identified by match to protein family HMM PF05685; hypothetical protein 24088 3853228 SRU_p0025 Salinibacter ruber DSM 13855 hypothetical protein YP_446983.1 23582 R 309807 CDS YP_446984.1 83816887 3853234 complement(24283..24951) 1 NC_007678.1 identified by match to protein family HMM PF00565; match to protein family HMM PF05901; nuclease, putative 24951 3853234 SRU_p0026 Salinibacter ruber DSM 13855 nuclease, putative YP_446984.1 24283 R 309807 CDS YP_446985.1 83816871 3853218 complement(24981..28187) 1 NC_007678.1 BseRI endonuclease, putative 28187 3853218 SRU_p0027 Salinibacter ruber DSM 13855 BseRI endonuclease, putative YP_446985.1 24981 R 309807 CDS YP_446986.1 83816888 3853235 complement(28239..28463) 1 NC_007678.1 hypothetical protein 28463 3853235 SRU_p0028 Salinibacter ruber DSM 13855 hypothetical protein YP_446986.1 28239 R 309807 CDS YP_446987.1 83816889 3853237 complement(28456..29091) 1 NC_007678.1 identified by similarity to GB:AAG24419.1; plasmid partition protein 29091 parA 3853237 parA Salinibacter ruber DSM 13855 plasmid partition protein YP_446987.1 28456 R 309807 CDS YP_446988.1 83816873 3853220 complement(29279..29599) 1 NC_007678.1 hypothetical protein 29599 3853220 SRU_p0030 Salinibacter ruber DSM 13855 hypothetical protein YP_446988.1 29279 R 309807 CDS YP_446989.1 83816877 3853224 complement(29658..31028) 1 NC_007678.1 hypothetical protein 31028 3853224 SRU_p0031 Salinibacter ruber DSM 13855 hypothetical protein YP_446989.1 29658 R 309807 CDS YP_446990.1 83816878 3853225 complement(31188..33632) 1 NC_007678.1 hypothetical protein 33632 3853225 SRU_p0032 Salinibacter ruber DSM 13855 hypothetical protein YP_446990.1 31188 R 309807 CDS YP_446991.1 83816870 3853217 33823..34917 1 NC_007678.1 hypothetical protein 34917 3853217 SRU_p0033 Salinibacter ruber DSM 13855 hypothetical protein YP_446991.1 33823 D 309807 CDS