-- dump date 20120504_160931 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 309807000001 SEQ_END SEQ_END NC_007677.1 3551823 3551823 DR NC_007677.1; contig end 3551823..3551823 Salinibacter ruber DSM 13855 309807000002 SEQ_END SEQ_END NC_007678.1 35505 35505 DR NC_007678.1; contig end 35505..35505 Salinibacter ruber DSM 13855 YP_444159.1 CDS dnaA NC_007677.1 2 1576 D identified by match to protein family HMM PF00308; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 2..1576 Salinibacter ruber DSM 13855 3851038 YP_444160.1 CDS dnaN NC_007677.1 1709 2842 D identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 1709..2842 Salinibacter ruber DSM 13855 3852188 YP_444161.1 CDS SRU_0003 NC_007677.1 2936 3931 R identified by match to protein family HMM PF07719; hypothetical protein complement(2936..3931) Salinibacter ruber DSM 13855 3851828 YP_444162.1 CDS SRU_0004 NC_007677.1 4174 4809 R identified by similarity to GB:AAM71887.1; RNA polymerase sigma-70 factor complement(4174..4809) Salinibacter ruber DSM 13855 3852149 YP_444163.1 CDS SRU_0005 NC_007677.1 5074 6048 D SCO1/SenC family protein 5074..6048 Salinibacter ruber DSM 13855 3851429 YP_444164.1 CDS SRU_0006 NC_007677.1 6116 7009 R identified by match to protein family HMM PF00106; retinol dehydrogenase 11 complement(6116..7009) Salinibacter ruber DSM 13855 3850466 YP_444165.1 CDS rpe NC_007677.1 7159 7893 R identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase complement(7159..7893) Salinibacter ruber DSM 13855 3850453 YP_444166.1 CDS SRU_0008 NC_007677.1 8062 8403 D identified by match to protein family HMM PF02583; hypothetical protein 8062..8403 Salinibacter ruber DSM 13855 3850397 YP_444167.1 CDS SRU_0009 NC_007677.1 8568 9080 D hypothetical protein 8568..9080 Salinibacter ruber DSM 13855 3852446 YP_444168.1 CDS SRU_0010 NC_007677.1 9129 10181 R hypothetical protein complement(9129..10181) Salinibacter ruber DSM 13855 3851893 YP_444169.1 CDS yajC NC_007677.1 10739 11074 D identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 10739..11074 Salinibacter ruber DSM 13855 3851289 YP_444170.1 CDS ribBA NC_007677.1 11129 12376 D identified by match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 11129..12376 Salinibacter ruber DSM 13855 3852481 YP_444171.1 CDS SRU_0013 NC_007677.1 12429 12593 D hypothetical protein 12429..12593 Salinibacter ruber DSM 13855 3850399 YP_444172.1 CDS SRU_0014 NC_007677.1 13259 15703 R identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization-related competence protein ComEC/Rec2 complement(13259..15703) Salinibacter ruber DSM 13855 3852811 YP_444173.1 CDS nusB NC_007677.1 15916 16398 D identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 15916..16398 Salinibacter ruber DSM 13855 3853170 YP_444174.1 CDS SRU_0016 NC_007677.1 16451 17113 D identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 16451..17113 Salinibacter ruber DSM 13855 3851406 YP_444175.1 CDS ychF NC_007677.1 17091 18293 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 17091..18293 Salinibacter ruber DSM 13855 3852950 YP_444176.1 CDS SRU_0018 NC_007677.1 18623 19558 D hypothetical protein 18623..19558 Salinibacter ruber DSM 13855 3852449 YP_444177.1 CDS SRU_0019 NC_007677.1 19634 20893 D identified by match to protein family HMM PF02687; hypothetical protein 19634..20893 Salinibacter ruber DSM 13855 3852181 YP_444178.1 CDS SRU_0020 NC_007677.1 21007 21828 D identified by match to protein family HMM PF02679; phosphosulfolactate synthase 21007..21828 Salinibacter ruber DSM 13855 3852798 YP_444179.1 CDS rpmB NC_007677.1 22022 22258 D identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 22022..22258 Salinibacter ruber DSM 13855 3851722 YP_444180.1 CDS rpmG NC_007677.1 22333 22497 D identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 22333..22497 Salinibacter ruber DSM 13855 3850371 YP_444181.1 CDS SRU_0023 NC_007677.1 22501 22650 D hypothetical protein 22501..22650 Salinibacter ruber DSM 13855 3850545 YP_444182.1 CDS SRU_0026 NC_007677.1 23412 25964 R identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR01443; replicative DNA helicase, intein-containing complement(23412..25964) Salinibacter ruber DSM 13855 3850757 YP_444183.1 CDS SRU_0027 NC_007677.1 26151 27014 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase complement(26151..27014) Salinibacter ruber DSM 13855 3851559 YP_444184.1 CDS coaBC NC_007677.1 27039 28280 R identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(27039..28280) Salinibacter ruber DSM 13855 3851173 YP_444185.1 CDS SRU_0029 NC_007677.1 28463 28828 R hypothetical protein complement(28463..28828) Salinibacter ruber DSM 13855 3853045 YP_444186.1 CDS SRU_0030 NC_007677.1 28890 29456 R identified by match to protein family HMM PF00625; guanylate kinase complement(28890..29456) Salinibacter ruber DSM 13855 3852697 YP_444187.1 CDS SRU_0031 NC_007677.1 29546 30430 R identified by similarity to GB:AAR35615.1; match to protein family HMM PF03755; match to protein family HMM TIGR00255; hypothetical protein complement(29546..30430) Salinibacter ruber DSM 13855 3850384 YP_444188.1 CDS frr NC_007677.1 30705 31274 R identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor complement(30705..31274) Salinibacter ruber DSM 13855 3850587 YP_444189.1 CDS pyrH NC_007677.1 31323 32102 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase complement(31323..32102) Salinibacter ruber DSM 13855 3850826 YP_444190.1 CDS tsf NC_007677.1 32287 33117 R identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts complement(32287..33117) Salinibacter ruber DSM 13855 3852627 YP_444191.1 CDS rpsB NC_007677.1 33185 34279 R identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 complement(33185..34279) Salinibacter ruber DSM 13855 3850752 YP_444192.1 CDS rpsI NC_007677.1 34420 34818 R identified by match to protein family HMM PF00380; 30S ribosomal protein S9 complement(34420..34818) Salinibacter ruber DSM 13855 3851959 YP_444193.1 CDS rplM NC_007677.1 34873 35343 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(34873..35343) Salinibacter ruber DSM 13855 3851453 YP_444194.1 CDS SRU_0039 NC_007677.1 35672 36193 D identified by match to protein family HMM PF02620; hypothetical protein 35672..36193 Salinibacter ruber DSM 13855 3852274 YP_444195.1 CDS rpmF NC_007677.1 36363 36560 D identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 36363..36560 Salinibacter ruber DSM 13855 3851599 YP_444196.1 CDS plsX NC_007677.1 36837 37853 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 36837..37853 Salinibacter ruber DSM 13855 3852495 YP_444197.1 CDS fabH NC_007677.1 37897 38901 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 37897..38901 Salinibacter ruber DSM 13855 3851065 YP_444198.1 CDS fabD NC_007677.1 38904 39926 D identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 38904..39926 Salinibacter ruber DSM 13855 3852089 YP_444199.1 CDS SRU_0044 NC_007677.1 39988 40833 D hypothetical protein 39988..40833 Salinibacter ruber DSM 13855 3851627 YP_444200.1 CDS fabG NC_007677.1 41017 41766 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase 41017..41766 Salinibacter ruber DSM 13855 3850980 YP_444201.1 CDS SRU_0046 NC_007677.1 41983 43419 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 41983..43419 Salinibacter ruber DSM 13855 3852093 YP_444202.1 CDS SRU_0047 NC_007677.1 44458 45588 R identified by match to protein family HMM PF07681; DoxX subfamily protein complement(44458..45588) Salinibacter ruber DSM 13855 3851972 YP_444203.1 CDS SRU_0048 NC_007677.1 45691 45942 R hypothetical protein complement(45691..45942) Salinibacter ruber DSM 13855 3852263 YP_444204.1 CDS SRU_0049 NC_007677.1 46066 47298 D identified by match to protein family HMM PF02073; aminopeptidase 46066..47298 Salinibacter ruber DSM 13855 3851967 YP_444205.1 CDS SRU_0050 NC_007677.1 47601 49058 D identified by match to protein family HMM PF00801; PKD domain-containing protein 47601..49058 Salinibacter ruber DSM 13855 3850426 YP_444206.1 CDS rpmH NC_007677.1 49558 49782 D identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; hypothetical protein 49558..49782 Salinibacter ruber DSM 13855 3852992 YP_444207.1 CDS SRU_0054 NC_007677.1 49795 50235 D hypothetical protein 49795..50235 Salinibacter ruber DSM 13855 3852080 YP_444208.1 CDS SRU_0055 NC_007677.1 50381 52378 D identified by match to protein family HMM PF02096; inner membrane protein oxaA 50381..52378 Salinibacter ruber DSM 13855 3851674 YP_444209.1 CDS trmE NC_007677.1 52573 53958 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE 52573..53958 Salinibacter ruber DSM 13855 3850894 YP_444210.1 CDS SRU_0057 NC_007677.1 54149 54895 D identified by match to protein family HMM PF01643; acyl-ACP thioesterase 54149..54895 Salinibacter ruber DSM 13855 3851166 YP_444211.1 CDS SRU_0058 NC_007677.1 55061 55792 D hypothetical protein 55061..55792 Salinibacter ruber DSM 13855 3852925 YP_444212.1 CDS SRU_0059 NC_007677.1 56738 57217 D hypothetical protein 56738..57217 Salinibacter ruber DSM 13855 3852674 YP_444213.1 CDS gidA NC_007677.1 57685 59679 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 57685..59679 Salinibacter ruber DSM 13855 3852431 YP_444214.1 CDS SRU_0061 NC_007677.1 59754 60401 D glucose inhibited division protein B 59754..60401 Salinibacter ruber DSM 13855 3852148 YP_444215.1 CDS SRU_0062 NC_007677.1 60470 61330 D hypothetical protein 60470..61330 Salinibacter ruber DSM 13855 3850433 YP_444216.1 CDS mfd NC_007677.1 61566 64994 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(61566..64994) Salinibacter ruber DSM 13855 3851160 YP_444217.1 CDS SRU_0064 NC_007677.1 65480 65836 D biotin synthesis protein 65480..65836 Salinibacter ruber DSM 13855 3851426 YP_444218.1 CDS murQ NC_007677.1 66646 67581 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase complement(66646..67581) Salinibacter ruber DSM 13855 3851019 YP_444219.1 CDS SRU_0066 NC_007677.1 67641 70316 R identified by match to protein family HMM PF00515; hypothetical protein complement(67641..70316) Salinibacter ruber DSM 13855 3852475 YP_444220.1 CDS recF NC_007677.1 71532 72770 D identified by similarity to SP:P05651; match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF 71532..72770 Salinibacter ruber DSM 13855 3852396 YP_444221.1 CDS SRU_0068 NC_007677.1 72880 74355 D identified by match to protein family HMM PF01435; M48 family peptidase 72880..74355 Salinibacter ruber DSM 13855 3850791 YP_444222.1 CDS SRU_0069 NC_007677.1 74455 74901 R identified by match to protein family HMM PF01575; phosphate acetyltransferase complement(74455..74901) Salinibacter ruber DSM 13855 3851136 YP_444223.1 CDS SRU_0070 NC_007677.1 75152 77701 D hypothetical protein 75152..77701 Salinibacter ruber DSM 13855 3850716 YP_444224.1 CDS SRU_0071 NC_007677.1 77736 79091 R identified by match to protein family HMM PF00589; match to protein family HMM TIGR02249; integrase/recombinase complement(77736..79091) Salinibacter ruber DSM 13855 3851714 YP_444225.1 CDS SRU_0072 NC_007677.1 80198 80590 D identified by match to protein family HMM PF01850; twitching mobility protein PilT 80198..80590 Salinibacter ruber DSM 13855 3851879 YP_444226.1 CDS SRU_0073 NC_007677.1 82004 82249 D hypothetical protein 82004..82249 Salinibacter ruber DSM 13855 3850550 YP_444227.1 CDS malP NC_007677.1 82754 84880 R identified by match to protein family HMM TIGR02094; maltodextrin phosphorylase complement(82754..84880) Salinibacter ruber DSM 13855 3852946 YP_444228.1 CDS SRU_0075 NC_007677.1 84966 87374 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 84966..87374 Salinibacter ruber DSM 13855 3852516 YP_444229.1 CDS SRU_0076 NC_007677.1 87384 88247 R hypothetical protein complement(87384..88247) Salinibacter ruber DSM 13855 3850906 YP_444230.2 CDS SRU_0077 NC_007677.1 88366 89799 R Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase complement(88366..89799) Salinibacter ruber DSM 13855 3851457 YP_444231.1 CDS zwf NC_007677.1 89850 91364 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(89850..91364) Salinibacter ruber DSM 13855 3850939 YP_444232.2 CDS gnd NC_007677.1 91440 92351 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(91440..92351) Salinibacter ruber DSM 13855 3852865 YP_444233.1 CDS tal NC_007677.1 92501 95263 R catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase complement(92501..95263) Salinibacter ruber DSM 13855 3852217 YP_444234.1 CDS SRU_0081 NC_007677.1 96341 96973 D hypothetical protein 96341..96973 Salinibacter ruber DSM 13855 3851192 YP_444235.1 CDS SRU_0082 NC_007677.1 97174 97821 D identified by match to protein family HMM PF00440; HTH-type transcriptional repressor Bm3R1 97174..97821 Salinibacter ruber DSM 13855 3851242 YP_444236.1 CDS SRU_0083 NC_007677.1 98069 100429 D identified by match to protein family HMM PF02321; cation efflux system protein 98069..100429 Salinibacter ruber DSM 13855 3852900 YP_444237.1 CDS SRU_0084 NC_007677.1 100404 101579 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; transport/efflux transmembrane protein 100404..101579 Salinibacter ruber DSM 13855 3852354 YP_444238.1 CDS SRU_0085 NC_007677.1 101639 104689 D identified by match to protein family HMM PF00873; match to protein family HMM PF01849; AcrB/AcrD/AcrF family transporter 101639..104689 Salinibacter ruber DSM 13855 3851313 YP_444239.1 CDS SRU_0086 NC_007677.1 105156 107294 D identified by match to protein family HMM PF00512; match to protein family HMM PF01336; match to protein family HMM PF02518; sensory box histidine kinase/response regulator 105156..107294 Salinibacter ruber DSM 13855 3851118 YP_444240.1 CDS ark NC_007677.1 107353 109308 R identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; adaptive-response sensory-kinase complement(107353..109308) Salinibacter ruber DSM 13855 3851988 YP_444241.1 CDS SRU_0088 NC_007677.1 109551 112091 R identified by match to protein family HMM PF00037; match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase domain-containing protein complement(109551..112091) Salinibacter ruber DSM 13855 3852304 YP_444242.1 CDS SRU_0089 NC_007677.1 112163 113872 R identified by match to protein family HMM PF02518; membrane bound his kinase A complement(112163..113872) Salinibacter ruber DSM 13855 3851229 YP_444243.1 CDS SRU_0090 NC_007677.1 113972 115429 R hypothetical protein complement(113972..115429) Salinibacter ruber DSM 13855 3853180 YP_444244.1 CDS SRU_0091 NC_007677.1 115517 116584 D hypothetical protein 115517..116584 Salinibacter ruber DSM 13855 3850987 YP_444245.1 CDS SRU_0092 NC_007677.1 116581 117471 D hypothetical protein 116581..117471 Salinibacter ruber DSM 13855 3852896 YP_444246.1 CDS ppc NC_007677.1 117625 120498 D identified by match to protein family HMM PF00311; phosphoenolpyruvate carboxylase 117625..120498 Salinibacter ruber DSM 13855 3851345 YP_444247.1 CDS SRU_0094 NC_007677.1 120498 121160 D hypothetical protein 120498..121160 Salinibacter ruber DSM 13855 3852580 YP_444248.1 CDS SRU_0095 NC_007677.1 121196 124399 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; utilizing regulatory protein tutC complement(121196..124399) Salinibacter ruber DSM 13855 3851291 YP_444249.1 CDS SRU_0096 NC_007677.1 125039 127927 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 125039..127927 Salinibacter ruber DSM 13855 3851154 YP_444250.1 CDS SRU_0097 NC_007677.1 127950 129395 D hypothetical protein 127950..129395 Salinibacter ruber DSM 13855 3852255 YP_444251.1 CDS SRU_0098 NC_007677.1 129371 130924 D hypothetical protein 129371..130924 Salinibacter ruber DSM 13855 3851619 YP_444252.1 CDS mauG NC_007677.1 131485 132615 D identified by match to protein family HMM PF03150; methylamine utilization protein 131485..132615 Salinibacter ruber DSM 13855 3851854 YP_444253.1 CDS SRU_0100 NC_007677.1 132844 133863 D hypothetical protein 132844..133863 Salinibacter ruber DSM 13855 3851439 YP_444254.1 CDS SRU_0101 NC_007677.1 134106 134714 D identified by match to protein family HMM PF04011; hypothetical protein 134106..134714 Salinibacter ruber DSM 13855 3851979 YP_444255.1 CDS SRU_0102 NC_007677.1 134774 135604 D identified by match to protein family HMM PF04536; hypothetical protein 134774..135604 Salinibacter ruber DSM 13855 3852519 YP_444256.1 CDS SRU_0103 NC_007677.1 135622 136074 D identified by match to protein family HMM PF00515; hypothetical protein 135622..136074 Salinibacter ruber DSM 13855 3852991 YP_444257.1 CDS SRU_0104 NC_007677.1 136108 137163 D identified by match to protein family HMM PF01476; LysM domain-containing protein 136108..137163 Salinibacter ruber DSM 13855 3852413 YP_444258.1 CDS SRU_0105 NC_007677.1 137252 138040 D identified by match to protein family HMM PF02517; CAAX amino protease 137252..138040 Salinibacter ruber DSM 13855 3850815 YP_444259.1 CDS SRU_0106 NC_007677.1 138226 139056 D identified by match to protein family HMM PF01435; peptidase 138226..139056 Salinibacter ruber DSM 13855 3850577 YP_444260.1 CDS SRU_0107 NC_007677.1 139238 139951 D identified by match to protein family HMM PF02630; electron transport protein 139238..139951 Salinibacter ruber DSM 13855 3850630 YP_444261.1 CDS SRU_0108 NC_007677.1 140188 140466 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 140188..140466 Salinibacter ruber DSM 13855 3853012 YP_444262.1 CDS SRU_0109 NC_007677.1 140430 140906 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 140430..140906 Salinibacter ruber DSM 13855 3852464 YP_444263.1 CDS SRU_0110 NC_007677.1 140882 141514 D hypothetical protein 140882..141514 Salinibacter ruber DSM 13855 3851056 YP_444264.1 CDS SRU_0111 NC_007677.1 141539 144013 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium efflux ATPase 141539..144013 Salinibacter ruber DSM 13855 3850766 YP_444265.1 CDS SRU_0112 NC_007677.1 144049 144495 D identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 144049..144495 Salinibacter ruber DSM 13855 3851826 YP_444266.1 CDS SRU_0113 NC_007677.1 144543 146162 R identified by match to protein family HMM PF02538; hydantoinase/oxoprolinase complement(144543..146162) Salinibacter ruber DSM 13855 3851317 YP_444267.1 CDS SRU_0114 NC_007677.1 147041 149830 D identified by match to protein family HMM TIGR01965; hypothetical protein 147041..149830 Salinibacter ruber DSM 13855 3851794 YP_444268.1 CDS SRU_0116 NC_007677.1 151047 151361 D hypothetical protein 151047..151361 Salinibacter ruber DSM 13855 3852768 YP_444269.1 CDS gcdH NC_007677.1 151336 152778 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; glutaryl-CoA dehydrogenase complement(151336..152778) Salinibacter ruber DSM 13855 3851813 YP_444270.1 CDS SRU_0117 NC_007677.1 153193 155694 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for iron transport 153193..155694 Salinibacter ruber DSM 13855 3851456 YP_444271.1 CDS SRU_0118 NC_007677.1 156848 157498 D hypothetical protein 156848..157498 Salinibacter ruber DSM 13855 3850855 YP_444272.1 CDS SRU_0119 NC_007677.1 158144 158869 R hypothetical protein complement(158144..158869) Salinibacter ruber DSM 13855 3851589 YP_444273.1 CDS SRU_0120 NC_007677.1 159451 160278 D hypothetical protein 159451..160278 Salinibacter ruber DSM 13855 3851874 YP_444274.1 CDS SRU_0121 NC_007677.1 160450 160923 D identified by match to protein family HMM PF07053; hypothetical protein 160450..160923 Salinibacter ruber DSM 13855 3850945 YP_444275.1 CDS SRU_0122 NC_007677.1 162162 162377 D hypothetical protein 162162..162377 Salinibacter ruber DSM 13855 3852252 YP_444276.1 CDS SRU_0123 NC_007677.1 162730 163479 D hypothetical protein 162730..163479 Salinibacter ruber DSM 13855 3850570 YP_444277.1 CDS SRU_0124 NC_007677.1 163519 164286 D hypothetical protein 163519..164286 Salinibacter ruber DSM 13855 3850812 YP_444278.1 CDS SRU_0125 NC_007677.1 164512 164652 R hypothetical protein complement(164512..164652) Salinibacter ruber DSM 13855 3852205 YP_444279.1 CDS SRU_0126 NC_007677.1 165130 166323 R hypothetical protein complement(165130..166323) Salinibacter ruber DSM 13855 3852645 YP_444280.1 CDS SRU_0127 NC_007677.1 167269 168831 D identified by match to protein family HMM PF03055; 15,15' beta carotene dioxygenase 167269..168831 Salinibacter ruber DSM 13855 3851407 YP_444281.1 CDS SRU_0128 NC_007677.1 168859 169710 D hypothetical protein 168859..169710 Salinibacter ruber DSM 13855 3850749 YP_444282.1 CDS SRU_0129 NC_007677.1 170200 171483 R identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; light- and oxygen-sensing transcription regulator complement(170200..171483) Salinibacter ruber DSM 13855 3850568 YP_444283.1 CDS SRU_0130 NC_007677.1 171722 172660 R identified by match to protein family HMM PF07446; GumN protein complement(171722..172660) Salinibacter ruber DSM 13855 3852587 YP_444284.1 CDS SRU_0131 NC_007677.1 173679 174653 D identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta 173679..174653 Salinibacter ruber DSM 13855 3851200 YP_444285.1 CDS SRU_0132 NC_007677.1 174757 177555 D identified by match to protein family HMM PF02867; match to protein family HMM TIGR02510; ribonucleoside-diphosphate reductase subunit alpha 174757..177555 Salinibacter ruber DSM 13855 3851898 YP_444286.1 CDS SRU_0133 NC_007677.1 177606 178052 D identified by match to protein family HMM PF03061; thioesterase family protein 177606..178052 Salinibacter ruber DSM 13855 3851886 YP_444287.1 CDS SRU_0134 NC_007677.1 178131 179294 R identified by match to protein family HMM PF07690; major facilitator superfamily transporter complement(178131..179294) Salinibacter ruber DSM 13855 3852256 YP_444288.1 CDS SRU_0135 NC_007677.1 181254 182819 D hypothetical protein 181254..182819 Salinibacter ruber DSM 13855 3852125 YP_444289.1 CDS SRU_0136 NC_007677.1 183046 183567 D hypothetical protein 183046..183567 Salinibacter ruber DSM 13855 3850688 YP_444290.1 CDS SRU_0137 NC_007677.1 183669 184331 D identified by match to protein family HMM PF00175; match to protein family HMM PF00970; phenol hydroxylase 183669..184331 Salinibacter ruber DSM 13855 3852244 YP_444291.1 CDS SRU_0138 NC_007677.1 184771 185436 D identified by match to protein family HMM PF01022; transcriptional regulator 184771..185436 Salinibacter ruber DSM 13855 3851822 YP_444292.1 CDS SRU_0139 NC_007677.1 186124 186594 D hypothetical protein 186124..186594 Salinibacter ruber DSM 13855 3851783 YP_444293.1 CDS SRU_0140 NC_007677.1 188299 189342 D hypothetical protein 188299..189342 Salinibacter ruber DSM 13855 3852850 YP_444294.1 CDS SRU_0141 NC_007677.1 189441 190913 R identified by match to protein family HMM PF00015; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein complement(189441..190913) Salinibacter ruber DSM 13855 3851121 YP_444295.1 CDS SRU_0142 NC_007677.1 191423 192502 R identified by match to protein family HMM PF00582; universal stress protein complement(191423..192502) Salinibacter ruber DSM 13855 3851316 YP_444296.1 CDS ark NC_007677.1 193235 195409 D identified by match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; adaptive-response sensory-kinase 193235..195409 Salinibacter ruber DSM 13855 3853071 YP_444297.1 CDS SRU_0144 NC_007677.1 195674 200680 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; redox sensing protein 195674..200680 Salinibacter ruber DSM 13855 3852797 YP_444298.1 CDS SRU_0145 NC_007677.1 200982 201206 D hypothetical protein 200982..201206 Salinibacter ruber DSM 13855 3851079 YP_444299.1 CDS SRU_0146 NC_007677.1 201387 203006 R hypothetical protein complement(201387..203006) Salinibacter ruber DSM 13855 3850889 YP_444300.1 CDS SRU_0147 NC_007677.1 203003 203953 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(203003..203953) Salinibacter ruber DSM 13855 3851643 YP_444301.1 CDS SRU_0148 NC_007677.1 203950 204870 R identified by match to protein family HMM PF02517; CAAX amino protease complement(203950..204870) Salinibacter ruber DSM 13855 3852561 YP_444302.1 CDS SRU_0149 NC_007677.1 205998 206402 D hypothetical protein 205998..206402 Salinibacter ruber DSM 13855 3851882 YP_444303.1 CDS SRU_0150 NC_007677.1 206432 207394 R identified by match to protein family HMM PF02574; vitamin B12-dependent methionine synthase family protein complement(206432..207394) Salinibacter ruber DSM 13855 3850658 YP_444304.1 CDS SRU_0151 NC_007677.1 207806 208096 R identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein complement(207806..208096) Salinibacter ruber DSM 13855 3852057 YP_444305.1 CDS SRU_0152 NC_007677.1 208326 209954 R hypothetical protein complement(208326..209954) Salinibacter ruber DSM 13855 3850925 YP_444306.1 CDS SRU_0153 NC_007677.1 209985 210668 D hypothetical protein 209985..210668 Salinibacter ruber DSM 13855 3851646 YP_444307.1 CDS SRU_0154 NC_007677.1 211340 212098 D hypothetical protein 211340..212098 Salinibacter ruber DSM 13855 3850665 YP_444308.1 CDS SRU_0155 NC_007677.1 213279 214376 R hypothetical protein complement(213279..214376) Salinibacter ruber DSM 13855 3850500 YP_444309.1 CDS SRU_0156 NC_007677.1 214728 215378 D thiol:disulfide interchange protein tlpA 214728..215378 Salinibacter ruber DSM 13855 3851101 YP_444310.1 CDS SRU_0157 NC_007677.1 215501 216139 R hypothetical protein complement(215501..216139) Salinibacter ruber DSM 13855 3853052 YP_444311.1 CDS SRU_0158 NC_007677.1 216651 218195 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis transducer 216651..218195 Salinibacter ruber DSM 13855 3852631 YP_444312.1 CDS SRU_0159 NC_007677.1 218182 220098 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 218182..220098 Salinibacter ruber DSM 13855 3851482 YP_444313.1 CDS SRU_0160 NC_007677.1 220588 220905 D hypothetical protein 220588..220905 Salinibacter ruber DSM 13855 3851073 YP_444314.1 CDS SRU_0161 NC_007677.1 220971 221585 R hypothetical protein complement(220971..221585) Salinibacter ruber DSM 13855 3852079 YP_444315.1 CDS SRU_0162 NC_007677.1 221705 221914 R hypothetical protein complement(221705..221914) Salinibacter ruber DSM 13855 3852525 YP_444316.1 CDS SRU_0163 NC_007677.1 222076 222462 R hypothetical protein complement(222076..222462) Salinibacter ruber DSM 13855 3852368 YP_444317.1 CDS SRU_0164 NC_007677.1 223777 224385 R hypothetical protein complement(223777..224385) Salinibacter ruber DSM 13855 3852596 YP_444318.1 CDS SRU_0165 NC_007677.1 224768 225250 R identified by match to protein family HMM PF00801; PKD domain-containing protein complement(224768..225250) Salinibacter ruber DSM 13855 3852928 YP_444319.1 CDS SRU_0166 NC_007677.1 225416 226501 R hypothetical protein complement(225416..226501) Salinibacter ruber DSM 13855 3850898 YP_444320.1 CDS SRU_0167 NC_007677.1 226501 227508 R hypothetical protein complement(226501..227508) Salinibacter ruber DSM 13855 3851464 YP_444321.1 CDS SRU_0168 NC_007677.1 227543 229813 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(227543..229813) Salinibacter ruber DSM 13855 3851902 YP_444322.1 CDS SRU_0169 NC_007677.1 230312 231343 R hypothetical protein complement(230312..231343) Salinibacter ruber DSM 13855 3852180 YP_444323.1 CDS SRU_0170 NC_007677.1 231996 233948 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor histidine kinase 231996..233948 Salinibacter ruber DSM 13855 3850768 YP_444324.1 CDS SRU_0171 NC_007677.1 233961 234611 R hypothetical protein complement(233961..234611) Salinibacter ruber DSM 13855 3851314 YP_444325.1 CDS SRU_0172 NC_007677.1 235935 236831 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 235935..236831 Salinibacter ruber DSM 13855 3851385 YP_444326.1 CDS SRU_0173 NC_007677.1 237008 240733 D hypothetical protein 237008..240733 Salinibacter ruber DSM 13855 3851847 YP_444327.1 CDS SRU_0174 NC_007677.1 241846 244590 R hypothetical protein complement(241846..244590) Salinibacter ruber DSM 13855 3852104 YP_444328.1 CDS SRU_0175 NC_007677.1 244773 245894 R identified by match to protein family HMM PF04773; anti-sigma factor complement(244773..245894) Salinibacter ruber DSM 13855 3851632 YP_444329.1 CDS SRU_0176 NC_007677.1 245884 246468 R identified by match to protein family HMM PF04542; match to protein family HMM PF04545; ECF subfamily RNA polymerase sigma-70 factor complement(245884..246468) Salinibacter ruber DSM 13855 3850672 YP_444330.1 CDS SRU_0177 NC_007677.1 246627 248729 R identified by match to protein family HMM PF01968; match to protein family HMM PF05378; 5-oxoprolinase complement(246627..248729) Salinibacter ruber DSM 13855 3851449 YP_444331.1 CDS SRU_0178 NC_007677.1 249037 249333 R identified by match to protein family HMM PF03683; hypothetical protein complement(249037..249333) Salinibacter ruber DSM 13855 3852047 YP_444332.1 CDS SRU_0179 NC_007677.1 250002 250409 R identified by match to protein family HMM PF01953; hypothetical protein complement(250002..250409) Salinibacter ruber DSM 13855 3852208 YP_444333.1 CDS SRU_0180 NC_007677.1 250406 250783 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(250406..250783) Salinibacter ruber DSM 13855 3852894 YP_444334.1 CDS SRU_0181 NC_007677.1 251476 251682 D hypothetical protein 251476..251682 Salinibacter ruber DSM 13855 3851636 YP_444335.1 CDS SRU_0182 NC_007677.1 252037 252510 R hypothetical protein complement(252037..252510) Salinibacter ruber DSM 13855 3851290 YP_444336.1 CDS SRU_0183 NC_007677.1 252563 253021 R identified by match to protein family HMM TIGR02293; hypothetical protein complement(252563..253021) Salinibacter ruber DSM 13855 3852362 YP_444337.1 CDS SRU_0184 NC_007677.1 253858 254136 D identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 253858..254136 Salinibacter ruber DSM 13855 3850641 YP_444338.1 CDS SRU_0186 NC_007677.1 254587 254712 R hypothetical protein complement(254587..254712) Salinibacter ruber DSM 13855 3851009 YP_444339.1 CDS SRU_0187 NC_007677.1 255072 255212 D transcriptional regulator 255072..255212 Salinibacter ruber DSM 13855 3851771 YP_444340.1 CDS SRU_0188 NC_007677.1 257015 258025 D identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase 257015..258025 Salinibacter ruber DSM 13855 3852195 YP_444341.1 CDS SRU_0190 NC_007677.1 260644 264255 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; hypothetical protein complement(260644..264255) Salinibacter ruber DSM 13855 3852633 YP_444342.1 CDS SRU_0191 NC_007677.1 266473 266871 D identified by match to protein family HMM PF01797; IS605 family transposase orfA 266473..266871 Salinibacter ruber DSM 13855 3850501 YP_444343.1 CDS SRU_0192 NC_007677.1 266875 268065 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase orfB 266875..268065 Salinibacter ruber DSM 13855 3852307 YP_444344.1 CDS SRU_0193 NC_007677.1 268122 268388 D hypothetical protein 268122..268388 Salinibacter ruber DSM 13855 3850714 YP_444345.1 CDS SRU_0194 NC_007677.1 268385 268642 D hypothetical protein 268385..268642 Salinibacter ruber DSM 13855 3850358 YP_444346.1 CDS SRU_0195 NC_007677.1 268835 269788 R hypothetical protein complement(268835..269788) Salinibacter ruber DSM 13855 3853161 YP_444347.1 CDS SRU_0196 NC_007677.1 271623 272837 R identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase complement(271623..272837) Salinibacter ruber DSM 13855 3851150 YP_444348.1 CDS SRU_0197 NC_007677.1 273162 273449 D hypothetical protein 273162..273449 Salinibacter ruber DSM 13855 3851110 YP_444349.1 CDS SRU_0198 NC_007677.1 273511 273918 D identified by match to protein family HMM PF01850; twitching mobility protein PilT 273511..273918 Salinibacter ruber DSM 13855 3850348 YP_444350.1 CDS SRU_0199 NC_007677.1 274156 274566 D glycosyl transferase family protein 274156..274566 Salinibacter ruber DSM 13855 3852665 YP_444351.1 CDS SRU_0200 NC_007677.1 274634 275893 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 274634..275893 Salinibacter ruber DSM 13855 3852523 YP_444352.1 CDS SRU_0201 NC_007677.1 275875 276522 D colanic acid biosynthesis glycosyl transferase 275875..276522 Salinibacter ruber DSM 13855 3852138 YP_444353.1 CDS SRU_0202 NC_007677.1 276522 276926 D hypothetical protein 276522..276926 Salinibacter ruber DSM 13855 3852965 YP_444354.1 CDS SRU_0203 NC_007677.1 276937 277242 D hypothetical protein 276937..277242 Salinibacter ruber DSM 13855 3852229 YP_444355.1 CDS SRU_0204 NC_007677.1 277233 277598 D identified by match to protein family HMM PF04255; hypothetical protein 277233..277598 Salinibacter ruber DSM 13855 3851700 YP_444356.1 CDS SRU_0205 NC_007677.1 277717 277878 R hypothetical protein complement(277717..277878) Salinibacter ruber DSM 13855 3851389 YP_444357.1 CDS SRU_0206 NC_007677.1 278165 278497 D hypothetical protein 278165..278497 Salinibacter ruber DSM 13855 3852666 YP_444358.1 CDS SRU_0207 NC_007677.1 278512 278955 D identified by match to protein family HMM PF01850; twitching mobility protein PilT 278512..278955 Salinibacter ruber DSM 13855 3852532 YP_444359.1 CDS SRU_0208 NC_007677.1 279185 279568 D hypothetical protein 279185..279568 Salinibacter ruber DSM 13855 3850777 YP_444360.1 CDS SRU_0209 NC_007677.1 279720 280046 D hypothetical protein 279720..280046 Salinibacter ruber DSM 13855 3850511 YP_444361.1 CDS SRU_0210 NC_007677.1 280043 280435 D identified by match to protein family HMM PF01850; twitching mobility protein PilT 280043..280435 Salinibacter ruber DSM 13855 3852329 YP_444362.1 CDS SRU_0211 NC_007677.1 280723 281544 R identified by match to protein family HMM PF05685; hypothetical protein complement(280723..281544) Salinibacter ruber DSM 13855 3852100 YP_444363.1 CDS SRU_0212 NC_007677.1 281827 281952 D hypothetical protein 281827..281952 Salinibacter ruber DSM 13855 3852206 YP_444364.1 CDS SRU_0213 NC_007677.1 282002 282568 D carbamoyltransferase 282002..282568 Salinibacter ruber DSM 13855 3850667 YP_444365.1 CDS SRU_0214 NC_007677.1 283993 284106 D hypothetical protein 283993..284106 Salinibacter ruber DSM 13855 3851657 YP_444366.1 CDS SRU_0215 NC_007677.1 284357 284509 D hypothetical protein 284357..284509 Salinibacter ruber DSM 13855 3850943 YP_444367.1 CDS SRU_0216 NC_007677.1 284682 285260 D identified by match to protein family HMM PF05685; hypothetical protein 284682..285260 Salinibacter ruber DSM 13855 3851376 YP_444368.1 CDS SRU_0217 NC_007677.1 286495 286638 D hypothetical protein 286495..286638 Salinibacter ruber DSM 13855 3850478 YP_444369.1 CDS SRU_0218 NC_007677.1 286653 287111 D hypothetical protein 286653..287111 Salinibacter ruber DSM 13855 3852620 YP_444370.1 CDS SRU_0219 NC_007677.1 287207 288538 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 287207..288538 Salinibacter ruber DSM 13855 3850997 YP_444371.1 CDS SRU_0220 NC_007677.1 288749 289222 D O-acetyl transferase 288749..289222 Salinibacter ruber DSM 13855 3851961 YP_444372.1 CDS SRU_0221 NC_007677.1 289879 290385 D hypothetical protein 289879..290385 Salinibacter ruber DSM 13855 3852356 YP_444373.1 CDS SRU_0222 NC_007677.1 290735 291061 D hypothetical protein 290735..291061 Salinibacter ruber DSM 13855 3850606 YP_444374.1 CDS SRU_0224 NC_007677.1 292776 294032 D identified by match to protein family HMM PF00534; colanic acid biosynthesis glycosyl transferase 292776..294032 Salinibacter ruber DSM 13855 3853006 YP_444375.1 CDS SRU_0225 NC_007677.1 294420 295919 D hypothetical protein 294420..295919 Salinibacter ruber DSM 13855 3853029 YP_444376.1 CDS SRU_0226 NC_007677.1 296362 297318 R identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase complement(296362..297318) Salinibacter ruber DSM 13855 3853185 YP_444377.1 CDS SRU_0228 NC_007677.1 299557 299772 R hypothetical protein complement(299557..299772) Salinibacter ruber DSM 13855 3852284 YP_444378.1 CDS SRU_0231 NC_007677.1 304039 306099 R hypothetical protein complement(304039..306099) Salinibacter ruber DSM 13855 3850994 YP_444379.1 CDS SRU_0232 NC_007677.1 308573 309118 D hypothetical protein 308573..309118 Salinibacter ruber DSM 13855 3851798 YP_444380.1 CDS SRU_0234 NC_007677.1 312355 312651 D identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator 312355..312651 Salinibacter ruber DSM 13855 3852978 YP_444381.1 CDS SRU_0235 NC_007677.1 312638 313039 D hypothetical protein 312638..313039 Salinibacter ruber DSM 13855 3852996 YP_444382.1 CDS SRU_0236 NC_007677.1 313832 315058 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase 313832..315058 Salinibacter ruber DSM 13855 3852383 YP_444383.1 CDS groEL NC_007677.1 315101 316813 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 315101..316813 Salinibacter ruber DSM 13855 3850465 YP_444384.1 CDS SRU_0238 NC_007677.1 317533 319095 D identified by match to protein family HMM PF00245; alkaline phosphatase family protein 317533..319095 Salinibacter ruber DSM 13855 3852803 YP_444385.1 CDS SRU_0239 NC_007677.1 319474 320610 R identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoate-protein ligase A complement(319474..320610) Salinibacter ruber DSM 13855 3852750 YP_444386.1 CDS SRU_0240 NC_007677.1 320611 321066 R hypothetical protein complement(320611..321066) Salinibacter ruber DSM 13855 3852455 YP_444387.1 CDS SRU_0241 NC_007677.1 321202 321432 R hypothetical protein complement(321202..321432) Salinibacter ruber DSM 13855 3851869 YP_444388.1 CDS SRU_0242 NC_007677.1 321532 322200 R hypothetical protein complement(321532..322200) Salinibacter ruber DSM 13855 3850593 YP_444389.1 CDS SRU_0243 NC_007677.1 322210 322656 R identified by match to protein family HMM PF00037; ferredoxin complement(322210..322656) Salinibacter ruber DSM 13855 3852245 YP_444390.1 CDS SRU_0244 NC_007677.1 323040 323690 D hypothetical protein 323040..323690 Salinibacter ruber DSM 13855 3852341 YP_444391.1 CDS SRU_0245 NC_007677.1 324454 325992 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 324454..325992 Salinibacter ruber DSM 13855 3851807 YP_444392.1 CDS SRU_0246 NC_007677.1 326456 327484 D hypothetical protein 326456..327484 Salinibacter ruber DSM 13855 3852102 YP_444393.1 CDS SRU_0247 NC_007677.1 328638 329267 D identified by match to protein family HMM PF00565; hypothetical protein 328638..329267 Salinibacter ruber DSM 13855 3852641 YP_444394.1 CDS SRU_0248 NC_007677.1 329551 330429 R identified by match to protein family HMM PF02517; CAAX amino protease complement(329551..330429) Salinibacter ruber DSM 13855 3852514 YP_444395.1 CDS SRU_0249 NC_007677.1 331736 332404 R hypothetical protein complement(331736..332404) Salinibacter ruber DSM 13855 3852075 YP_444396.1 CDS SRU_0250 NC_007677.1 333393 333485 D hypothetical protein 333393..333485 Salinibacter ruber DSM 13855 3851471 YP_444397.1 CDS SRU_0251 NC_007677.1 333682 337038 D identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box/GGDEF family protein 333682..337038 Salinibacter ruber DSM 13855 3851415 YP_444398.1 CDS SRU_0252 NC_007677.1 337039 337509 D identified by match to protein family HMM PF00072; TcrA 337039..337509 Salinibacter ruber DSM 13855 3852624 YP_444399.1 CDS SRU_0253 NC_007677.1 337527 338651 D identified by match to protein family HMM PF03130; HEAT repeat-containing PBS lyase 337527..338651 Salinibacter ruber DSM 13855 3851839 YP_444400.1 CDS SRU_0254 NC_007677.1 338747 340051 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 338747..340051 Salinibacter ruber DSM 13855 3851660 YP_444401.1 CDS SRU_0255 NC_007677.1 340089 340892 D hypothetical protein 340089..340892 Salinibacter ruber DSM 13855 3852290 YP_444402.1 CDS SRU_0256 NC_007677.1 342129 342500 D (p)ppGpp 3-pyrophosphohydrolase 342129..342500 Salinibacter ruber DSM 13855 3853015 YP_444403.1 CDS SRU_0257 NC_007677.1 343338 343784 D hypothetical protein 343338..343784 Salinibacter ruber DSM 13855 3852197 YP_444404.1 CDS SRU_0258 NC_007677.1 344731 345489 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; alginate biosynthesis regulatory protein complement(344731..345489) Salinibacter ruber DSM 13855 3851621 YP_444405.1 CDS SRU_0259 NC_007677.1 345525 346502 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; histidine kinase family protein complement(345525..346502) Salinibacter ruber DSM 13855 3850984 YP_444406.1 CDS lnt NC_007677.1 346834 348369 R identified by match to protein family HMM PF00795; apolipoprotein N-acyltransferase complement(346834..348369) Salinibacter ruber DSM 13855 3852932 YP_444407.1 CDS SRU_0261 NC_007677.1 348791 349354 D identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 348791..349354 Salinibacter ruber DSM 13855 3850771 YP_444408.1 CDS SRU_0262 NC_007677.1 352939 353328 R identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB complement(352939..353328) Salinibacter ruber DSM 13855 3851189 YP_444409.1 CDS SRU_0263 NC_007677.1 353389 353487 D hypothetical protein 353389..353487 Salinibacter ruber DSM 13855 3852625 YP_444410.1 CDS SRU_0264 NC_007677.1 353651 354580 R hypothetical protein complement(353651..354580) Salinibacter ruber DSM 13855 3851990 YP_444411.1 CDS SRU_0265 NC_007677.1 354768 355718 R hypothetical protein complement(354768..355718) Salinibacter ruber DSM 13855 3852444 YP_444412.1 CDS SRU_0266 NC_007677.1 356818 358080 R identified by match to protein family HMM PF00953; glycosyl transferase N-acetylglucosaminyltransferase), RgpG complement(356818..358080) Salinibacter ruber DSM 13855 3853191 YP_444413.1 CDS SRU_0267 NC_007677.1 358762 360381 D hypothetical protein 358762..360381 Salinibacter ruber DSM 13855 3850589 YP_444414.1 CDS SRU_0268 NC_007677.1 360472 361548 R hypothetical protein complement(360472..361548) Salinibacter ruber DSM 13855 3852254 YP_444415.1 CDS recG NC_007677.1 361774 363876 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG complement(361774..363876) Salinibacter ruber DSM 13855 3850662 YP_444416.1 CDS SRU_0270 NC_007677.1 364005 364691 R hypothetical protein complement(364005..364691) Salinibacter ruber DSM 13855 3851272 YP_444417.1 CDS SRU_0271 NC_007677.1 365109 366554 D hypothetical protein 365109..366554 Salinibacter ruber DSM 13855 3852308 YP_444418.1 CDS SRU_0272 NC_007677.1 366829 367239 D hypothetical protein 366829..367239 Salinibacter ruber DSM 13855 3851521 YP_444419.1 CDS SRU_0273 NC_007677.1 367232 367687 D phosphodiesterase/alkaline phosphatase D-like protein 367232..367687 Salinibacter ruber DSM 13855 3853194 YP_444420.1 CDS SRU_0274 NC_007677.1 368061 369338 D collagen a1 368061..369338 Salinibacter ruber DSM 13855 3851348 YP_444421.1 CDS tkt NC_007677.1 369681 371711 D identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 369681..371711 Salinibacter ruber DSM 13855 3850782 YP_444422.1 CDS SRU_0276 NC_007677.1 371828 372508 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 371828..372508 Salinibacter ruber DSM 13855 3851335 YP_444423.1 CDS SRU_0277 NC_007677.1 372586 374208 R identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; sodium/glucose cotransporter complement(372586..374208) Salinibacter ruber DSM 13855 3851356 YP_444424.1 CDS SRU_0278 NC_007677.1 374655 375644 R hypothetical protein complement(374655..375644) Salinibacter ruber DSM 13855 3852794 YP_444425.1 CDS SRU_0279 NC_007677.1 375691 376764 R hypothetical protein complement(375691..376764) Salinibacter ruber DSM 13855 3850362 YP_444426.1 CDS SRU_0280 NC_007677.1 376761 377438 R hypothetical protein complement(376761..377438) Salinibacter ruber DSM 13855 3852551 YP_444427.1 CDS SRU_0281 NC_007677.1 377533 378696 R identified by match to protein family HMM PF00534; glycoside hydrolase complement(377533..378696) Salinibacter ruber DSM 13855 3850988 YP_444428.1 CDS SRU_0282 NC_007677.1 378750 379535 R hypothetical protein complement(378750..379535) Salinibacter ruber DSM 13855 3851298 YP_444429.1 CDS SRU_0283 NC_007677.1 379694 380173 R hypothetical protein complement(379694..380173) Salinibacter ruber DSM 13855 3850413 YP_444430.1 CDS SRU_0284 NC_007677.1 380491 380598 D hypothetical protein 380491..380598 Salinibacter ruber DSM 13855 3853118 YP_444431.1 CDS SRU_0285 NC_007677.1 380669 381445 D hypothetical protein 380669..381445 Salinibacter ruber DSM 13855 3850702 YP_444432.1 CDS SRU_0286 NC_007677.1 381541 382545 D hypothetical protein 381541..382545 Salinibacter ruber DSM 13855 3853201 YP_444433.1 CDS SRU_0287 NC_007677.1 382588 383052 D hypothetical protein 382588..383052 Salinibacter ruber DSM 13855 3853008 YP_444434.1 CDS SRU_0288 NC_007677.1 383123 384013 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 383123..384013 Salinibacter ruber DSM 13855 3852209 YP_444435.1 CDS SRU_0289 NC_007677.1 384104 384421 D hypothetical protein 384104..384421 Salinibacter ruber DSM 13855 3853151 YP_444436.1 CDS SRU_0290 NC_007677.1 384458 384832 D identified by match to protein family HMM PF05154; TM2 domain-containing protein 384458..384832 Salinibacter ruber DSM 13855 3850349 YP_444437.1 CDS SRU_0291 NC_007677.1 384848 386785 R identified by match to protein family HMM PF01464; match to protein family HMM PF01476; peptidoglycan N-acetylmuramoylhydrolase complement(384848..386785) Salinibacter ruber DSM 13855 3853111 YP_444438.1 CDS SRU_0292 NC_007677.1 386727 387911 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; transporter complement(386727..387911) Salinibacter ruber DSM 13855 3850394 YP_444439.1 CDS SRU_0293 NC_007677.1 387917 388084 R hypothetical protein complement(387917..388084) Salinibacter ruber DSM 13855 3852742 YP_444440.1 CDS SRU_0294 NC_007677.1 388187 388879 R identified by match to protein family HMM PF00005; ABC transporter nucleotide binding/ATPase protein complement(388187..388879) Salinibacter ruber DSM 13855 3851761 YP_444441.1 CDS SRU_0295 NC_007677.1 388887 389165 R hypothetical protein complement(388887..389165) Salinibacter ruber DSM 13855 3850639 YP_444442.1 CDS SRU_0296 NC_007677.1 389188 391107 R identified by match to protein family HMM PF03572; S41 family peptidase complement(389188..391107) Salinibacter ruber DSM 13855 3852235 YP_444443.1 CDS SRU_0297 NC_007677.1 391125 394610 R identified by match to protein family HMM PF03572; match to protein family HMM PF05569; S41 family peptidase complement(391125..394610) Salinibacter ruber DSM 13855 3850532 YP_444444.1 CDS SRU_0298 NC_007677.1 394641 395075 R identified by match to protein family HMM PF03965; BlaI/MecI/CopY family transcriptional regulator complement(394641..395075) Salinibacter ruber DSM 13855 3852546 YP_444445.1 CDS recQ NC_007677.1 395334 397157 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 395334..397157 Salinibacter ruber DSM 13855 3850443 YP_444446.1 CDS SRU_0300 NC_007677.1 399757 402441 D identified by match to protein family HMM PF02867; match to protein family HMM TIGR02504; ribonucleoside-diphosphate reductase 399757..402441 Salinibacter ruber DSM 13855 3850585 YP_444447.1 CDS SRU_0301 NC_007677.1 402598 405210 D catalyzes the 4-phospho-L-aspartate from L-aspartate and the formation of lysine from meso-2,6-diaminoheptanedioate; bifunctional aspartate kinase/diaminopimelate decarboxylase protein 402598..405210 Salinibacter ruber DSM 13855 3850836 YP_444448.1 CDS SRU_0302 NC_007677.1 405235 405909 R identified by match to protein family HMM PF05685; hypothetical protein complement(405235..405909) Salinibacter ruber DSM 13855 3850919 YP_444449.1 CDS SRU_0303 NC_007677.1 405955 406722 D identified by match to protein family HMM PF01987; match to protein family HMM TIGR00266; hypothetical protein 405955..406722 Salinibacter ruber DSM 13855 3850506 YP_444450.1 CDS umuD NC_007677.1 406996 407418 D identified by similarity to SP:P04153; match to protein family HMM PF00717; umuD protein 406996..407418 Salinibacter ruber DSM 13855 3852805 YP_444451.1 CDS SRU_0305 NC_007677.1 407473 408753 D identified by match to protein family HMM PF00817; protein umuC 407473..408753 Salinibacter ruber DSM 13855 3853024 YP_444452.1 CDS SRU_0306 NC_007677.1 408911 410557 D identified by match to protein family HMM PF05670; RNA-biniding protein 408911..410557 Salinibacter ruber DSM 13855 3850567 YP_444453.1 CDS SRU_0307 NC_007677.1 410616 413603 R hypothetical protein complement(410616..413603) Salinibacter ruber DSM 13855 3852547 YP_444454.1 CDS nosZ NC_007677.1 414287 416176 D identified by similarity to SP:Q59746; match to protein family HMM PF00116; nitrous oxide reductase 414287..416176 Salinibacter ruber DSM 13855 3851884 YP_444455.1 CDS SRU_0309 NC_007677.1 416177 416959 D hypothetical protein 416177..416959 Salinibacter ruber DSM 13855 3852063 YP_444456.1 CDS nosD NC_007677.1 417050 418447 D identified by match to protein family HMM PF05048; NosD protein 417050..418447 Salinibacter ruber DSM 13855 3851477 YP_444457.1 CDS SRU_0311 NC_007677.1 418444 419124 D identified by match to protein family HMM PF00005; NosF protein 418444..419124 Salinibacter ruber DSM 13855 3851297 YP_444458.1 CDS SRU_0312 NC_007677.1 419494 420978 D hypothetical protein 419494..420978 Salinibacter ruber DSM 13855 3850393 YP_444459.1 CDS coxB2 NC_007677.1 421496 422017 D identified by similarity to GB:AAV46104.1; match to protein family HMM PF00116; cytochrome c oxidase subunit II 421496..422017 Salinibacter ruber DSM 13855 3851237 YP_444460.1 CDS coxA2 NC_007677.1 422014 423687 D identified by similarity to GB:AAV46105.1; match to protein family HMM PF00115; cytochrome c oxidase subunit I 422014..423687 Salinibacter ruber DSM 13855 3851663 YP_444461.1 CDS SRU_0315 NC_007677.1 423694 424419 D hypothetical protein 423694..424419 Salinibacter ruber DSM 13855 3852270 YP_444462.1 CDS SRU_0316 NC_007677.1 424642 425451 D identified by match to protein family HMM PF00392; match to protein family HMM PF07702; GntR family transcriptional regulator 424642..425451 Salinibacter ruber DSM 13855 3850380 YP_444463.1 CDS SRU_0317 NC_007677.1 425513 426712 R identified by match to protein family HMM PF07992; filamentous hemagglutinin complement(425513..426712) Salinibacter ruber DSM 13855 3851596 YP_444464.1 CDS SRU_0318 NC_007677.1 426785 427561 R hypothetical protein complement(426785..427561) Salinibacter ruber DSM 13855 3851249 YP_444465.1 CDS SRU_0319 NC_007677.1 427842 428438 R hypothetical protein complement(427842..428438) Salinibacter ruber DSM 13855 3852117 YP_444466.1 CDS SRU_0320 NC_007677.1 428566 428796 D hypothetical protein 428566..428796 Salinibacter ruber DSM 13855 3850456 YP_444467.1 CDS SRU_0321 NC_007677.1 428793 429011 D hypothetical protein 428793..429011 Salinibacter ruber DSM 13855 3850483 YP_444468.1 CDS SRU_0322 NC_007677.1 429042 430556 D identified by match to protein family HMM PF00115; cytochrome-c oxidase 429042..430556 Salinibacter ruber DSM 13855 3850871 YP_444469.1 CDS SRU_0323 NC_007677.1 430601 431197 D identified by match to protein family HMM PF02433; cytochrome c oxidase, cbb3-type subunit II 430601..431197 Salinibacter ruber DSM 13855 3850473 YP_444470.1 CDS SRU_0324 NC_007677.1 431254 432033 D identified by match to protein family HMM PF00034; cytochrome c family protein 431254..432033 Salinibacter ruber DSM 13855 3851775 YP_444471.1 CDS SRU_0325 NC_007677.1 432247 434214 D identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase subfamily protein 432247..434214 Salinibacter ruber DSM 13855 3851179 YP_444472.1 CDS SRU_0326 NC_007677.1 434440 436005 D identified by match to protein family HMM PF00581; match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 434440..436005 Salinibacter ruber DSM 13855 3852874 YP_444473.1 CDS SRU_0327 NC_007677.1 436101 436865 D identified by match to protein family HMM PF01925; hypothetical protein 436101..436865 Salinibacter ruber DSM 13855 3851815 YP_444474.1 CDS gufA NC_007677.1 437300 438049 D identified by match to protein family HMM PF02535; gufA protein 437300..438049 Salinibacter ruber DSM 13855 3852241 YP_444475.1 CDS SRU_0329 NC_007677.1 438243 438755 D identified by match to protein family HMM PF00210; general stress protein 20U 438243..438755 Salinibacter ruber DSM 13855 3852826 YP_444476.1 CDS SRU_0330 NC_007677.1 438907 442050 D identified by match to protein family HMM PF00873; cation/multidrug efflux pump 438907..442050 Salinibacter ruber DSM 13855 3850779 YP_444477.1 CDS SRU_0331 NC_007677.1 442055 442642 D hypothetical protein 442055..442642 Salinibacter ruber DSM 13855 3851777 YP_444478.1 CDS SRU_0332 NC_007677.1 442680 443393 R identified by match to protein family HMM PF03070; TENA/THI-4 family protein complement(442680..443393) Salinibacter ruber DSM 13855 3851165 YP_444479.1 CDS SRU_0333 NC_007677.1 443673 447008 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component system sensor protein complement(443673..447008) Salinibacter ruber DSM 13855 3851223 YP_444480.1 CDS SRU_0334 NC_007677.1 447192 447815 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(447192..447815) Salinibacter ruber DSM 13855 3852176 YP_444481.1 CDS SRU_0335 NC_007677.1 447916 450297 R identified by similarity to PIR:G84370; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; heavy-metal transporting CPx-type ATPase complement(447916..450297) Salinibacter ruber DSM 13855 3850813 YP_444482.1 CDS cheB NC_007677.1 450312 454091 D identified by match to protein family HMM PF00989; match to protein family HMM PF01339; match to protein family HMM PF01739; match to protein family HMM PF02518; match to protein family HMM PF03705; match to protein family HMM TIGR00229; protein-glutamate methylesterase CheB 450312..454091 Salinibacter ruber DSM 13855 3851645 YP_444483.1 CDS SRU_0337 NC_007677.1 454227 455039 D identified by match to protein family HMM PF02673; undecaprenyl-diphosphatase 1 454227..455039 Salinibacter ruber DSM 13855 3850899 YP_444484.1 CDS SRU_0338 NC_007677.1 455681 456508 D ABC transporter substrate-binding protein 455681..456508 Salinibacter ruber DSM 13855 3851077 YP_444485.1 CDS SRU_0339 NC_007677.1 456656 458173 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00650; Era/ThdF family GTP-binding protein 456656..458173 Salinibacter ruber DSM 13855 3852273 YP_444486.1 CDS SRU_0340 NC_007677.1 458390 459118 D identified by match to protein family HMM PF01066; phosphatidylcholine synthase 458390..459118 Salinibacter ruber DSM 13855 3851447 YP_444487.1 CDS SRU_0341 NC_007677.1 459165 459869 R identified by match to protein family HMM PF03886; hypothetical protein complement(459165..459869) Salinibacter ruber DSM 13855 3851966 YP_444488.1 CDS SRU_0342 NC_007677.1 459874 460908 R identified by match to protein family HMM PF02470; paraquat-inducible protein B complement(459874..460908) Salinibacter ruber DSM 13855 3852747 YP_444489.1 CDS SRU_0343 NC_007677.1 460942 461709 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(460942..461709) Salinibacter ruber DSM 13855 3852381 YP_444490.1 CDS SRU_0344 NC_007677.1 461905 463020 R identified by match to protein family HMM PF02405; ABC transporter permease complement(461905..463020) Salinibacter ruber DSM 13855 3852200 YP_444491.1 CDS SRU_0345 NC_007677.1 463438 463926 D hypothetical protein 463438..463926 Salinibacter ruber DSM 13855 3851137 YP_444492.1 CDS SRU_0346 NC_007677.1 464218 464910 R identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein complement(464218..464910) Salinibacter ruber DSM 13855 3852392 YP_444493.1 CDS SRU_0347 NC_007677.1 465045 466028 R identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM PF03447; oxidoreductase family protein complement(465045..466028) Salinibacter ruber DSM 13855 3851030 YP_444494.1 CDS pncB NC_007677.1 466337 467725 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(466337..467725) Salinibacter ruber DSM 13855 3853152 YP_444495.1 CDS SRU_0349 NC_007677.1 467867 470710 R hypothetical protein complement(467867..470710) Salinibacter ruber DSM 13855 3851354 YP_444496.1 CDS SRU_0350 NC_007677.1 470962 471486 R hypothetical protein complement(470962..471486) Salinibacter ruber DSM 13855 3850387 YP_444497.1 CDS SRU_0351 NC_007677.1 472071 474194 R identified by match to protein family HMM TIGR00376; DNA helicase complement(472071..474194) Salinibacter ruber DSM 13855 3851856 YP_444498.1 CDS cirA NC_007677.1 474624 477671 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782; TonB-dependent receptor 474624..477671 Salinibacter ruber DSM 13855 3851503 YP_444499.1 CDS SRU_0353 NC_007677.1 477692 478780 D identified by match to protein family HMM PF00512; sensory transduction histidine kinase 477692..478780 Salinibacter ruber DSM 13855 3852644 YP_444500.1 CDS SRU_0354 NC_007677.1 478750 479253 D identified by match to protein family HMM PF02518; sensor histidine kinase 478750..479253 Salinibacter ruber DSM 13855 3851635 YP_444501.1 CDS SRU_0355 NC_007677.1 479882 481699 R identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; sodium/glucose cotransporter 2 complement(479882..481699) Salinibacter ruber DSM 13855 3852740 YP_444502.1 CDS SRU_0356 NC_007677.1 481763 482710 R identified by match to protein family HMM PF01609; IS982 family transposase complement(481763..482710) Salinibacter ruber DSM 13855 3851437 YP_444503.1 CDS SRU_0357 NC_007677.1 482972 484111 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 482972..484111 Salinibacter ruber DSM 13855 3852296 YP_444504.1 CDS SRU_0358 NC_007677.1 484205 487273 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein 484205..487273 Salinibacter ruber DSM 13855 3852337 YP_444505.1 CDS SRU_0359 NC_007677.1 487206 488975 D identified by match to protein family HMM PF07980; outer membrane protein 487206..488975 Salinibacter ruber DSM 13855 3852877 YP_444506.1 CDS SRU_0360 NC_007677.1 489206 490531 D hypothetical protein 489206..490531 Salinibacter ruber DSM 13855 3852473 YP_444507.1 CDS SRU_0361 NC_007677.1 490677 494705 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; alpha-amylase 490677..494705 Salinibacter ruber DSM 13855 3850974 YP_444508.1 CDS SRU_0362 NC_007677.1 495285 497120 D identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 495285..497120 Salinibacter ruber DSM 13855 3852423 YP_444509.1 CDS SRU_0363 NC_007677.1 497197 497799 R hypothetical protein complement(497197..497799) Salinibacter ruber DSM 13855 3851817 YP_444510.1 CDS SRU_0364 NC_007677.1 497844 498554 D identified by match to protein family HMM PF01812; 5-formyltetrahydrofolate cyclo-ligase 497844..498554 Salinibacter ruber DSM 13855 3852921 YP_444511.1 CDS SRU_0365 NC_007677.1 498678 499937 D identified by match to protein family HMM PF07690; sugar transporter 498678..499937 Salinibacter ruber DSM 13855 3851177 YP_444512.1 CDS SRU_0366 NC_007677.1 500333 503419 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 500333..503419 Salinibacter ruber DSM 13855 3852428 YP_444513.1 CDS SRU_0367 NC_007677.1 503394 505100 D hypothetical protein 503394..505100 Salinibacter ruber DSM 13855 3852732 YP_444514.1 CDS chb NC_007677.1 505170 507827 D identified by match to protein family HMM PF00728; match to protein family HMM PF03174; beta-N-acetylhexosaminidase 505170..507827 Salinibacter ruber DSM 13855 3852713 YP_444515.1 CDS rbsR NC_007677.1 508116 509129 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 508116..509129 Salinibacter ruber DSM 13855 3853125 YP_444516.1 CDS SRU_0370 NC_007677.1 509131 510483 D hypothetical protein 509131..510483 Salinibacter ruber DSM 13855 3850977 YP_444517.1 CDS SRU_0371 NC_007677.1 510792 512636 D identified by match to protein family HMM PF00474; Na+/proline symporter 510792..512636 Salinibacter ruber DSM 13855 3852114 YP_444518.1 CDS SRU_0372 NC_007677.1 512684 515623 D identified by match to protein family HMM PF00144; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM TIGR01409; beta-N-acetylglucosaminidase 512684..515623 Salinibacter ruber DSM 13855 3852330 YP_444519.1 CDS SRU_0373 NC_007677.1 515966 516880 D identified by match to protein family HMM PF01869; N-acetylglucosamine kinase 515966..516880 Salinibacter ruber DSM 13855 3852967 YP_444520.1 CDS SRU_0374 NC_007677.1 516877 518781 D identified by match to protein family HMM PF00474; transporter solute:sodium symporter (SSS) family protein 516877..518781 Salinibacter ruber DSM 13855 3853164 YP_444521.1 CDS SRU_0375 NC_007677.1 518896 519126 D hypothetical protein 518896..519126 Salinibacter ruber DSM 13855 3851903 YP_444522.1 CDS SRU_0376 NC_007677.1 519126 519365 D hypothetical protein 519126..519365 Salinibacter ruber DSM 13855 3851719 YP_444523.1 CDS SRU_0377 NC_007677.1 519369 519716 R hypothetical protein complement(519369..519716) Salinibacter ruber DSM 13855 3852584 YP_444524.1 CDS SRU_0378 NC_007677.1 519742 520107 R hypothetical protein complement(519742..520107) Salinibacter ruber DSM 13855 3851083 YP_444525.1 CDS SRU_0380 NC_007677.1 520447 520917 D identified by match to protein family HMM PF00571; hypothetical protein 520447..520917 Salinibacter ruber DSM 13855 3852704 YP_444526.1 CDS SRU_0381 NC_007677.1 520961 522571 R identified by match to protein family HMM PF00450; carboxypeptidase-like protein complement(520961..522571) Salinibacter ruber DSM 13855 3851919 YP_444527.1 CDS kbl NC_007677.1 522614 523807 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(522614..523807) Salinibacter ruber DSM 13855 3851504 YP_444528.1 CDS SRU_0383 NC_007677.1 523934 524941 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; epimerase/reductase complement(523934..524941) Salinibacter ruber DSM 13855 3850579 YP_444529.1 CDS SRU_0384 NC_007677.1 525246 525743 D identified by match to protein family HMM PF01037; match to protein family HMM TIGR01199; AsnC family transcriptional regulator 525246..525743 Salinibacter ruber DSM 13855 3852059 YP_444530.1 CDS glnA NC_007677.1 525778 527175 D identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 525778..527175 Salinibacter ruber DSM 13855 3852513 YP_444531.1 CDS purB NC_007677.1 527382 528794 D identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; adenylosuccinate lyase 527382..528794 Salinibacter ruber DSM 13855 3852672 YP_444532.1 CDS SRU_0387 NC_007677.1 529038 530900 D identified by match to protein family HMM PF00723; glycosyl hydrolase family protein 529038..530900 Salinibacter ruber DSM 13855 3852483 YP_444533.1 CDS SRU_0388 NC_007677.1 530897 531406 D hypothetical protein 530897..531406 Salinibacter ruber DSM 13855 3850730 YP_444534.1 CDS SRU_0389 NC_007677.1 531512 532009 R hypothetical protein complement(531512..532009) Salinibacter ruber DSM 13855 3851459 YP_444535.1 CDS SRU_0390 NC_007677.1 532088 532435 R hypothetical protein complement(532088..532435) Salinibacter ruber DSM 13855 3850819 YP_444536.1 CDS SRU_0391 NC_007677.1 532643 533827 D identified by match to protein family HMM PF01244; dipeptidase 532643..533827 Salinibacter ruber DSM 13855 3852407 YP_444537.1 CDS SRU_0392 NC_007677.1 534054 536237 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 534054..536237 Salinibacter ruber DSM 13855 3850632 YP_444538.1 CDS SRU_0393 NC_007677.1 536439 536813 D identified by match to protein family HMM PF00507; NADH-quinone oxidoreductase chain a 536439..536813 Salinibacter ruber DSM 13855 3853007 YP_444539.1 CDS SRU_0394 NC_007677.1 537009 537650 D identified by match to protein family HMM PF01058; match to protein family HMM TIGR01957; NADH-quinone oxidoreductase subunit B 537009..537650 Salinibacter ruber DSM 13855 3851114 YP_444540.1 CDS SRU_0395 NC_007677.1 537734 538438 D identified by match to protein family HMM PF00329; match to protein family HMM TIGR01961; NADH-quinone oxidoreductase subunit C/D 537734..538438 Salinibacter ruber DSM 13855 3850968 YP_444541.1 CDS nuoD NC_007677.1 538494 539849 D identified by match to protein family HMM PF00346; match to protein family HMM TIGR01962; NADH dehydrogenase I subunit D 538494..539849 Salinibacter ruber DSM 13855 3851013 YP_444542.1 CDS SRU_0397 NC_007677.1 539875 540624 D identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958; NADH-ubiquinone oxidoreductase 24 kDa subunit 539875..540624 Salinibacter ruber DSM 13855 3852837 YP_444543.1 CDS SRU_0398 NC_007677.1 540695 542089 D identified by match to protein family HMM PF01512; respiratory-chain NADH dehydrogenase 51 Kd subunit family protein 540695..542089 Salinibacter ruber DSM 13855 3853104 YP_444544.1 CDS SRU_0399 NC_007677.1 542144 542584 D hypothetical protein 542144..542584 Salinibacter ruber DSM 13855 3852118 YP_444545.1 CDS nuoG NC_007677.1 542810 544549 D identified by match to protein family HMM PF00111; NADH dehydrogenase i subunit G 542810..544549 Salinibacter ruber DSM 13855 3851323 YP_444546.1 CDS SRU_0401 NC_007677.1 544752 545135 D hypothetical protein 544752..545135 Salinibacter ruber DSM 13855 3852531 YP_444547.1 CDS SRU_0402 NC_007677.1 545229 545879 D hypothetical protein 545229..545879 Salinibacter ruber DSM 13855 3850497 YP_444548.1 CDS SRU_0403 NC_007677.1 545996 547699 D identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; NAD(+) synthase 545996..547699 Salinibacter ruber DSM 13855 3850356 YP_444549.1 CDS lspA NC_007677.1 547763 548500 D identified by match to protein family HMM PF01252; signal peptidase (SPase) II 547763..548500 Salinibacter ruber DSM 13855 3851936 YP_444550.1 CDS lepA NC_007677.1 548658 550472 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 548658..550472 Salinibacter ruber DSM 13855 3851081 YP_444551.1 CDS SRU_0406 NC_007677.1 550559 551431 D hypothetical protein 550559..551431 Salinibacter ruber DSM 13855 3852272 YP_444552.1 CDS lepB NC_007677.1 551486 552664 D identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 551486..552664 Salinibacter ruber DSM 13855 3853095 YP_444553.1 CDS SRU_0408 NC_007677.1 552728 553705 R identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein complement(552728..553705) Salinibacter ruber DSM 13855 3850867 YP_444554.1 CDS SRU_0409 NC_007677.1 553788 555023 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF07885; potassium channel complement(553788..555023) Salinibacter ruber DSM 13855 3850830 YP_444555.1 CDS SRU_0410 NC_007677.1 555042 555731 R hypothetical protein complement(555042..555731) Salinibacter ruber DSM 13855 3850437 YP_444556.1 CDS SRU_0411 NC_007677.1 555705 556577 D identified by match to protein family HMM PF07681; DoxX subfamily protein 555705..556577 Salinibacter ruber DSM 13855 3853001 YP_444557.1 CDS SRU_0413 NC_007677.1 556706 557878 D identified by match to protein family HMM PF01734; patatin family phospholipase 556706..557878 Salinibacter ruber DSM 13855 3852351 YP_444558.1 CDS folA NC_007677.1 557848 558408 R identified by match to protein family HMM PF00186; dihydrofolate reductase complement(557848..558408) Salinibacter ruber DSM 13855 3851780 YP_444559.1 CDS SRU_0414 NC_007677.1 558409 559992 R identified by match to protein family HMM PF01425; amidase complement(558409..559992) Salinibacter ruber DSM 13855 3850600 YP_444560.1 CDS SRU_0415 NC_007677.1 560405 561538 D identified by match to protein family HMM PF02518; match to protein family HMM PF06580; transmembrane sensor histidine kinase transcription regulator protein 560405..561538 Salinibacter ruber DSM 13855 3852468 YP_444561.1 CDS algR NC_007677.1 561614 562354 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; two-component system, regulatory protein 561614..562354 Salinibacter ruber DSM 13855 3850892 YP_444562.1 CDS SRU_0417 NC_007677.1 562654 565602 D hypothetical protein 562654..565602 Salinibacter ruber DSM 13855 3852709 YP_444563.1 CDS SRU_0418 NC_007677.1 565815 566999 D identified by match to protein family HMM PF07396; phosphate-selective porin O and P superfamily protein 565815..566999 Salinibacter ruber DSM 13855 3852845 YP_444564.1 CDS thyA NC_007677.1 567015 568082 R identified by match to protein family HMM PF00303; thymidylate synthase complement(567015..568082) Salinibacter ruber DSM 13855 3851912 YP_444565.1 CDS SRU_0420 NC_007677.1 568187 568519 D hypothetical protein 568187..568519 Salinibacter ruber DSM 13855 3852000 YP_444566.1 CDS apaG NC_007677.1 568668 569177 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(568668..569177) Salinibacter ruber DSM 13855 3852334 YP_444567.1 CDS cysH NC_007677.1 569303 570061 D identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434; phosophoadenylyl-sulfate reductase subfamily protein 569303..570061 Salinibacter ruber DSM 13855 3852402 YP_444568.1 CDS SRU_0423 NC_007677.1 570217 572115 D identified by match to protein family HMM PF01558; match to protein family HMM PF01855; pyruvate synthase 570217..572115 Salinibacter ruber DSM 13855 3852113 YP_444569.1 CDS SRU_0424 NC_007677.1 572268 573632 D catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 572268..573632 Salinibacter ruber DSM 13855 3851147 YP_444570.1 CDS SRU_0425 NC_007677.1 573790 574200 D identified by match to protein family HMM PF07681; DoxD-like family protein 573790..574200 Salinibacter ruber DSM 13855 3852530 YP_444571.1 CDS SRU_0426 NC_007677.1 574215 574715 D identified by match to protein family HMM PF07681; DoxX subfamily protein 574215..574715 Salinibacter ruber DSM 13855 3852634 YP_444572.1 CDS SRU_0427 NC_007677.1 574708 575790 D identified by match to protein family HMM PF01593; amine oxidase, flavin-containing 574708..575790 Salinibacter ruber DSM 13855 3852595 YP_444573.1 CDS SRU_0428 NC_007677.1 575996 576592 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; PfpI family intracellular peptidase 575996..576592 Salinibacter ruber DSM 13855 3852489 YP_444574.1 CDS SRU_0429 NC_007677.1 576758 577153 R hypothetical protein complement(576758..577153) Salinibacter ruber DSM 13855 3852109 YP_444575.1 CDS SRU_0430 NC_007677.1 577125 577325 D hypothetical protein 577125..577325 Salinibacter ruber DSM 13855 3851749 YP_444576.1 CDS proV NC_007677.1 577551 578648 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 577551..578648 Salinibacter ruber DSM 13855 3850772 YP_444577.1 CDS SRU_0432 NC_007677.1 578719 579597 D identified by match to protein family HMM PF00528; glycine betaine/L-proline transport system permease proW 578719..579597 Salinibacter ruber DSM 13855 3852974 YP_444578.1 CDS SRU_0433 NC_007677.1 579777 580730 D identified by match to protein family HMM PF04069; ABC transporter substrate-binding protein 579777..580730 Salinibacter ruber DSM 13855 3851080 YP_444579.1 CDS SRU_0434 NC_007677.1 580893 581912 D identified by match to protein family HMM PF04069; glycine betaine ABC transporter glycine betaine-binding protein 580893..581912 Salinibacter ruber DSM 13855 3851438 YP_444580.1 CDS SRU_0435 NC_007677.1 582036 583538 D hypothetical protein 582036..583538 Salinibacter ruber DSM 13855 3852679 YP_444581.1 CDS SRU_0436 NC_007677.1 583629 584774 D identified by match to protein family HMM PF04087; match to protein family HMM TIGR00341; hypothetical protein 583629..584774 Salinibacter ruber DSM 13855 3852538 YP_444582.1 CDS SRU_0437 NC_007677.1 584811 586052 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily transporter complement(584811..586052) Salinibacter ruber DSM 13855 3851254 YP_444583.1 CDS SRU_0438 NC_007677.1 586446 589277 D identified by match to protein family HMM PF00593; match to protein family HMM PF05738; match to protein family HMM PF07715; outer membrane protein 586446..589277 Salinibacter ruber DSM 13855 3850640 YP_444584.1 CDS SRU_0439 NC_007677.1 589463 591094 D outer membrane lipoprotein 589463..591094 Salinibacter ruber DSM 13855 3851873 YP_444585.1 CDS SRU_0440 NC_007677.1 591270 592451 D hypothetical protein 591270..592451 Salinibacter ruber DSM 13855 3850616 YP_444586.1 CDS SRU_0441 NC_007677.1 592566 592811 D hypothetical protein 592566..592811 Salinibacter ruber DSM 13855 3852294 YP_444587.1 CDS SRU_0443 NC_007677.1 592811 593596 D identified by match to protein family HMM PF03372; dioxygenase 592811..593596 Salinibacter ruber DSM 13855 3851984 YP_444588.1 CDS SRU_0442 NC_007677.1 593584 594510 R identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system protein PhoU complement(593584..594510) Salinibacter ruber DSM 13855 3850934 YP_444589.1 CDS SRU_0444 NC_007677.1 594438 595583 R identified by match to protein family HMM PF00534; glycoside hydrolase complement(594438..595583) Salinibacter ruber DSM 13855 3852566 YP_444590.1 CDS SRU_0445 NC_007677.1 595679 597184 R identified by match to protein family HMM PF00534; sulfolipid synthase complement(595679..597184) Salinibacter ruber DSM 13855 3850969 YP_444591.1 CDS SRU_0446 NC_007677.1 597184 599802 R hypothetical protein complement(597184..599802) Salinibacter ruber DSM 13855 3850389 YP_444592.1 CDS SRU_0447 NC_007677.1 600086 600382 R hypothetical protein complement(600086..600382) Salinibacter ruber DSM 13855 3851505 YP_444593.1 CDS SRU_0448 NC_007677.1 600450 601148 R hypothetical protein complement(600450..601148) Salinibacter ruber DSM 13855 3852419 YP_444594.1 CDS uvrA NC_007677.1 601430 604375 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A complement(601430..604375) Salinibacter ruber DSM 13855 3851241 YP_444595.1 CDS SRU_0451 NC_007677.1 604638 605831 D identified by match to protein family HMM PF07995; pyrroloquinoline-quinone glucose dehydrogenase 604638..605831 Salinibacter ruber DSM 13855 3851170 YP_444596.1 CDS SRU_0450 NC_007677.1 605782 606867 R translation initiation factor IF-2 complement(605782..606867) Salinibacter ruber DSM 13855 3851188 YP_444597.1 CDS SRU_0452 NC_007677.1 606864 608000 R identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein complement(606864..608000) Salinibacter ruber DSM 13855 3853059 YP_444598.1 CDS SRU_0453 NC_007677.1 608027 608647 D hypothetical protein 608027..608647 Salinibacter ruber DSM 13855 3853058 YP_444599.1 CDS SRU_0454 NC_007677.1 608693 609934 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; carboxypeptidase G2 608693..609934 Salinibacter ruber DSM 13855 3853105 YP_444600.1 CDS SRU_0455 NC_007677.1 609984 611030 D hypothetical protein 609984..611030 Salinibacter ruber DSM 13855 3851128 YP_444601.1 CDS ileS NC_007677.1 611236 614478 D identified by match to protein family HMM PF00133; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 611236..614478 Salinibacter ruber DSM 13855 3851628 YP_444602.1 CDS SRU_0457 NC_007677.1 614557 615033 D RNA polymerase-binding protein DksA 614557..615033 Salinibacter ruber DSM 13855 3850564 YP_444603.1 CDS ruvA NC_007677.1 615198 615806 D identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 615198..615806 Salinibacter ruber DSM 13855 3852676 YP_444604.1 CDS prsA NC_007677.1 615844 616821 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 615844..616821 Salinibacter ruber DSM 13855 3852231 YP_444605.1 CDS SRU_0460 NC_007677.1 617006 617587 R hypothetical protein complement(617006..617587) Salinibacter ruber DSM 13855 3851566 YP_444606.1 CDS SRU_0461 NC_007677.1 617656 618219 D deoxycytidine triphosphate deaminase 617656..618219 Salinibacter ruber DSM 13855 3850896 YP_444607.1 CDS mutM NC_007677.1 618307 619104 D identified by similarity to SP:O34403; match to protein family HMM PF01149; match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 618307..619104 Salinibacter ruber DSM 13855 3852662 YP_444608.1 CDS SRU_0463 NC_007677.1 619169 619909 D identified by match to protein family HMM PF01904; hypothetical protein 619169..619909 Salinibacter ruber DSM 13855 3850345 YP_444609.1 CDS SRU_0464 NC_007677.1 619952 620977 D identified by match to protein family HMM PF03969; ATPase 619952..620977 Salinibacter ruber DSM 13855 3851284 YP_444610.1 CDS typA NC_007677.1 621390 623312 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; GTP-binding protein TypA 621390..623312 Salinibacter ruber DSM 13855 3852309 YP_444611.1 CDS SRU_0466 NC_007677.1 623361 623936 R hypothetical protein complement(623361..623936) Salinibacter ruber DSM 13855 3851695 YP_444612.1 CDS dnaJ NC_007677.1 624396 625394 R identified by match to protein family HMM PF00226; match to protein family HMM PF01556; dnaJ protein complement(624396..625394) Salinibacter ruber DSM 13855 3852769 YP_444613.1 CDS accC NC_007677.1 625491 627011 D identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 625491..627011 Salinibacter ruber DSM 13855 3851196 YP_444614.1 CDS SRU_0469 NC_007677.1 628448 629473 R hypothetical protein complement(628448..629473) Salinibacter ruber DSM 13855 3851247 YP_444615.1 CDS SRU_0470 NC_007677.1 630413 636421 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory histidine protein kinase complement(630413..636421) Salinibacter ruber DSM 13855 3852033 YP_444616.1 CDS SRU_0471 NC_007677.1 636458 636832 R hypothetical protein complement(636458..636832) Salinibacter ruber DSM 13855 3850783 YP_444617.1 CDS SRU_0472 NC_007677.1 638191 640398 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; HTR-like protein complement(638191..640398) Salinibacter ruber DSM 13855 3852510 YP_444618.1 CDS SRU_0473 NC_007677.1 640562 643777 R identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family multidrug efflux protein complement(640562..643777) Salinibacter ruber DSM 13855 3850740 YP_444619.1 CDS SRU_0474 NC_007677.1 643774 644307 R hypothetical protein complement(643774..644307) Salinibacter ruber DSM 13855 3852589 YP_444620.1 CDS SRU_0475 NC_007677.1 644373 645557 R identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(644373..645557) Salinibacter ruber DSM 13855 3852684 YP_444621.1 CDS SRU_0476 NC_007677.1 645682 647130 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; outer membrane efflux protein complement(645682..647130) Salinibacter ruber DSM 13855 3851355 YP_444622.1 CDS SRU_0477 NC_007677.1 647213 648127 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(647213..648127) Salinibacter ruber DSM 13855 3853145 YP_444623.1 CDS SRU_0478 NC_007677.1 648194 648682 D identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 648194..648682 Salinibacter ruber DSM 13855 3851125 YP_444624.1 CDS cysD NC_007677.1 649032 650444 D identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; O-acetylhomoserine sulfhydrylase 649032..650444 Salinibacter ruber DSM 13855 3852759 YP_444625.1 CDS metX NC_007677.1 650575 651633 D identified by similarity to SP:P45131; match to protein family HMM PF00561; match to protein family HMM TIGR01392; homoserine O-acetyltransferase 650575..651633 Salinibacter ruber DSM 13855 3850878 YP_444626.1 CDS lysC NC_007677.1 651765 652718 D identified by match to protein family HMM PF00696; aspartate kinase 651765..652718 Salinibacter ruber DSM 13855 3850366 YP_444627.1 CDS SRU_0482 NC_007677.1 652742 653866 D identified by match to protein family HMM PF00742; match to protein family HMM PF03447; bifunctional aspartokinase/homoserine dehydrogenase I 652742..653866 Salinibacter ruber DSM 13855 3850792 YP_444628.1 CDS SRU_0483 NC_007677.1 654039 658079 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; histidine kinase DhkJ complement(654039..658079) Salinibacter ruber DSM 13855 3852567 YP_444629.1 CDS sdhB NC_007677.1 658694 659425 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(658694..659425) Salinibacter ruber DSM 13855 3850520 YP_444630.1 CDS sdhA NC_007677.1 659512 661347 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(659512..661347) Salinibacter ruber DSM 13855 3852398 YP_444631.1 CDS SRU_0486 NC_007677.1 661371 661823 R succinate dehydrogenase, membrane subunit complement(661371..661823) Salinibacter ruber DSM 13855 3850463 YP_444632.1 CDS SRU_0487 NC_007677.1 661876 662370 R identified by match to protein family HMM PF01127; succinate dehydrogenase membrane subunit complement(661876..662370) Salinibacter ruber DSM 13855 3850960 YP_444633.1 CDS citA NC_007677.1 662502 663857 R identified by match to protein family HMM PF00285; match to protein family HMM TIGR01800; citrate synthase complement(662502..663857) Salinibacter ruber DSM 13855 3852908 YP_444634.1 CDS SRU_0489 NC_007677.1 664474 666264 D identified by match to protein family HMM TIGR00757; ribonuclease 664474..666264 Salinibacter ruber DSM 13855 3850981 YP_444635.1 CDS SRU_0490 NC_007677.1 666347 666631 D hypothetical protein 666347..666631 Salinibacter ruber DSM 13855 3852333 YP_444636.1 CDS SRU_0491 NC_007677.1 666621 667496 D identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 666621..667496 Salinibacter ruber DSM 13855 3851906 YP_444637.1 CDS aroQ NC_007677.1 667561 667989 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 667561..667989 Salinibacter ruber DSM 13855 3850342 YP_444638.1 CDS SRU_0493 NC_007677.1 668158 668634 D identified by match to protein family HMM PF04307; metal-dependent hydrolase 668158..668634 Salinibacter ruber DSM 13855 3850439 YP_444639.1 CDS mviN NC_007677.1 668733 670430 D identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 668733..670430 Salinibacter ruber DSM 13855 3853135 YP_444640.1 CDS SRU_0495 NC_007677.1 670568 671134 D identified by match to protein family HMM PF02622; hypothetical protein 670568..671134 Salinibacter ruber DSM 13855 3851499 YP_444641.1 CDS nuoI NC_007677.1 671446 672054 D identified by match to protein family HMM PF00037; NADH dehydrogenase i, i subunit 671446..672054 Salinibacter ruber DSM 13855 3852705 YP_444642.1 CDS SRU_0497 NC_007677.1 672239 672724 D hypothetical protein 672239..672724 Salinibacter ruber DSM 13855 3851450 YP_444643.1 CDS holA NC_007677.1 672803 673846 D identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 672803..673846 Salinibacter ruber DSM 13855 3852271 YP_444644.1 CDS SRU_0499 NC_007677.1 674024 674740 D hypothetical protein 674024..674740 Salinibacter ruber DSM 13855 3852522 YP_444645.1 CDS SRU_0501 NC_007677.1 675099 675659 D hypothetical protein 675099..675659 Salinibacter ruber DSM 13855 3850818 YP_444646.1 CDS SRU_0502 NC_007677.1 675722 676126 D identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 675722..676126 Salinibacter ruber DSM 13855 3853031 YP_444647.1 CDS SRU_0503 NC_007677.1 676215 676682 R hypothetical protein complement(676215..676682) Salinibacter ruber DSM 13855 3852150 YP_444648.1 CDS SRU_0504 NC_007677.1 676772 677710 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; RNA methyltransferase complement(676772..677710) Salinibacter ruber DSM 13855 3851943 YP_444649.1 CDS gdhA NC_007677.1 677767 679071 D identified by similarity to SP:P96110; match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase 677767..679071 Salinibacter ruber DSM 13855 3850481 YP_444650.1 CDS SRU_0507 NC_007677.1 679068 681128 D hypothetical protein 679068..681128 Salinibacter ruber DSM 13855 3852314 YP_444651.1 CDS SRU_0508 NC_007677.1 681176 682804 D identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; sugar kinase 681176..682804 Salinibacter ruber DSM 13855 3851743 YP_444652.1 CDS SRU_0509 NC_007677.1 682856 683269 D hypothetical protein 682856..683269 Salinibacter ruber DSM 13855 3853078 YP_444653.1 CDS SRU_0510 NC_007677.1 683629 684123 D identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB 683629..684123 Salinibacter ruber DSM 13855 3850575 YP_444654.1 CDS rpiA NC_007677.1 684234 685058 R identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A complement(684234..685058) Salinibacter ruber DSM 13855 3850958 YP_444655.1 CDS SRU_0512 NC_007677.1 685033 685443 R hypothetical protein complement(685033..685443) Salinibacter ruber DSM 13855 3850729 YP_444656.1 CDS uvrd NC_007677.1 685564 687702 R identified by match to protein family HMM PF00580; ATP-dependent DNA helicase complement(685564..687702) Salinibacter ruber DSM 13855 3852829 YP_444657.1 CDS soj NC_007677.1 688018 688938 D identified by match to protein family HMM PF01656; SpoOJ regulator protein 688018..688938 Salinibacter ruber DSM 13855 3850607 YP_444658.1 CDS spo0J NC_007677.1 689005 689985 D identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; spoOJ protein 689005..689985 Salinibacter ruber DSM 13855 3850979 YP_444659.1 CDS SRU_0516 NC_007677.1 690103 690813 D hypothetical protein 690103..690813 Salinibacter ruber DSM 13855 3850404 YP_444660.1 CDS bioF NC_007677.1 691144 692457 D identified by match to protein family HMM PF00155; match to protein family HMM PF00202; 8-amino-7-oxononanoate synthase 691144..692457 Salinibacter ruber DSM 13855 3851532 YP_444661.1 CDS SRU_0518 NC_007677.1 692491 693741 D hypothetical protein 692491..693741 Salinibacter ruber DSM 13855 3851814 YP_444662.1 CDS SRU_0519 NC_007677.1 693806 694504 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; haloacid dehalogenase-like hydrolase 693806..694504 Salinibacter ruber DSM 13855 3850760 YP_444663.1 CDS SRU_0520 NC_007677.1 694506 695198 R identified by match to protein family HMM PF01694; integral membrane protein complement(694506..695198) Salinibacter ruber DSM 13855 3851318 YP_444664.1 CDS purQ NC_007677.1 695287 695994 R identified by match to protein family HMM PF07685; match to protein family HMM TIGR01737; phosphoribosylformylglycinamidine synthase I complement(695287..695994) Salinibacter ruber DSM 13855 3851519 YP_444665.1 CDS SRU_0522 NC_007677.1 696091 697626 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; very long chain acyl-CoA dehydrogenase-related protein complement(696091..697626) Salinibacter ruber DSM 13855 3851585 YP_444666.1 CDS ssb NC_007677.1 697955 698461 R identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein complement(697955..698461) Salinibacter ruber DSM 13855 3850902 YP_444667.1 CDS SRU_0524 NC_007677.1 698978 699793 R identified by match to protein family HMM PF00561; beta-D-galactosidase complement(698978..699793) Salinibacter ruber DSM 13855 3851076 YP_444668.1 CDS SRU_0525 NC_007677.1 700295 700600 D hypothetical protein 700295..700600 Salinibacter ruber DSM 13855 3852053 YP_444669.1 CDS SRU_0526 NC_007677.1 700681 701505 D hypothetical protein 700681..701505 Salinibacter ruber DSM 13855 3853053 YP_444670.1 CDS udk NC_007677.1 701565 702236 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 701565..702236 Salinibacter ruber DSM 13855 3850747 YP_444671.1 CDS SRU_0528 NC_007677.1 702266 703036 R identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; transcriptional regulator complement(702266..703036) Salinibacter ruber DSM 13855 3852408 YP_444672.1 CDS SRU_0529 NC_007677.1 703064 703861 R identified by similarity to SP:P42975; match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase complement(703064..703861) Salinibacter ruber DSM 13855 3852227 YP_444673.1 CDS SRU_0530 NC_007677.1 703925 704761 R hypothetical protein complement(703925..704761) Salinibacter ruber DSM 13855 3851681 YP_444674.1 CDS SRU_0531 NC_007677.1 704901 705734 D identified by match to protein family HMM PF00459; inositol-1-monophosphatase 704901..705734 Salinibacter ruber DSM 13855 3851228 YP_444675.1 CDS fabI NC_007677.1 705791 706627 D enoyl-(acyl-carrier-protein) reductase 705791..706627 Salinibacter ruber DSM 13855 3851032 YP_444676.1 CDS SRU_0533 NC_007677.1 706637 707425 D identified by match to protein family HMM PF00702; phosphoglycolate phosphatase 706637..707425 Salinibacter ruber DSM 13855 3851612 YP_444677.1 CDS SRU_0534 NC_007677.1 707401 708315 D hypothetical protein 707401..708315 Salinibacter ruber DSM 13855 3850846 YP_444678.1 CDS SRU_0535 NC_007677.1 708611 709174 D hypothetical protein 708611..709174 Salinibacter ruber DSM 13855 3852448 YP_444679.1 CDS SRU_0536 NC_007677.1 709318 710628 R identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; NupC family protein complement(709318..710628) Salinibacter ruber DSM 13855 3850787 YP_444680.1 CDS SRU_0537 NC_007677.1 710822 712852 R peptidase complement(710822..712852) Salinibacter ruber DSM 13855 3853132 YP_444681.1 CDS SRU_0538 NC_007677.1 713066 715426 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase pcrA 713066..715426 Salinibacter ruber DSM 13855 3852926 YP_444682.1 CDS SRU_0539 NC_007677.1 715461 715973 R identified by match to protein family HMM TIGR02246; hypothetical protein complement(715461..715973) Salinibacter ruber DSM 13855 3850699 YP_444683.1 CDS SRU_0540 NC_007677.1 716033 716851 R HNH endonuclease family protein complement(716033..716851) Salinibacter ruber DSM 13855 3851181 YP_444684.1 CDS SRU_0541 NC_007677.1 717083 717982 R hypothetical protein complement(717083..717982) Salinibacter ruber DSM 13855 3851339 YP_444685.1 CDS SRU_0542 NC_007677.1 718212 719051 R identified by match to protein family HMM PF01063; aminotransferase complement(718212..719051) Salinibacter ruber DSM 13855 3851388 YP_444686.1 CDS SRU_0543 NC_007677.1 719136 719660 D hypothetical protein 719136..719660 Salinibacter ruber DSM 13855 3852507 YP_444687.1 CDS pdxH NC_007677.1 719798 720445 R identified by match to protein family HMM PF01243; match to protein family HMM TIGR00558; pyridoxamine 5'-phosphate oxidase complement(719798..720445) Salinibacter ruber DSM 13855 3850948 YP_444688.1 CDS SRU_0545 NC_007677.1 720572 721405 R hypothetical protein complement(720572..721405) Salinibacter ruber DSM 13855 3852954 YP_444689.1 CDS SRU_0546 NC_007677.1 721429 722289 D identified by match to protein family HMM PF01619; proline dehydrogenase superfamily protein 721429..722289 Salinibacter ruber DSM 13855 3851487 YP_444690.1 CDS SRU_0547 NC_007677.1 722409 722945 R identified by match to protein family HMM PF01661; Appr-1-p processing enzyme family protein complement(722409..722945) Salinibacter ruber DSM 13855 3852285 YP_444691.1 CDS SRU_0548 NC_007677.1 723096 723953 D hypothetical protein 723096..723953 Salinibacter ruber DSM 13855 3850703 YP_444692.1 CDS SRU_0549 NC_007677.1 723980 724603 D identified by match to protein family HMM PF00571; hypothetical protein 723980..724603 Salinibacter ruber DSM 13855 3851591 YP_444693.1 CDS pyrG NC_007677.1 724839 726536 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 724839..726536 Salinibacter ruber DSM 13855 3852693 YP_444694.1 CDS SRU_0551 NC_007677.1 726717 727733 R identified by match to protein family HMM PF01726; match to protein family HMM TIGR00498; LexA repressor complement(726717..727733) Salinibacter ruber DSM 13855 3851422 YP_444695.1 CDS mraZ NC_007677.1 727703 728179 D identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; mraZ protein 727703..728179 Salinibacter ruber DSM 13855 3850558 YP_444696.1 CDS mraW NC_007677.1 728212 729222 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 728212..729222 Salinibacter ruber DSM 13855 3851143 YP_444697.1 CDS SRU_0554 NC_007677.1 729263 729760 D hypothetical protein 729263..729760 Salinibacter ruber DSM 13855 3850492 YP_444698.1 CDS SRU_0555 NC_007677.1 729827 731773 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 3 729827..731773 Salinibacter ruber DSM 13855 3851268 YP_444699.1 CDS murE NC_007677.1 731748 733316 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01085; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 731748..733316 Salinibacter ruber DSM 13855 3851183 YP_444700.1 CDS mraY NC_007677.1 733374 734531 D identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 733374..734531 Salinibacter ruber DSM 13855 3850721 YP_444701.1 CDS murD NC_007677.1 734603 735985 D identified by match to protein family HMM PF02875; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase 734603..735985 Salinibacter ruber DSM 13855 3851702 YP_444702.1 CDS SRU_0559 NC_007677.1 736130 737269 D identified by match to protein family HMM PF01098; cell division protein FtsW 736130..737269 Salinibacter ruber DSM 13855 3850638 YP_444703.1 CDS murG NC_007677.1 737331 738443 D identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 737331..738443 Salinibacter ruber DSM 13855 3852552 YP_444704.1 CDS murC NC_007677.1 738524 739951 D identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 738524..739951 Salinibacter ruber DSM 13855 3850553 YP_444705.1 CDS SRU_0562 NC_007677.1 740099 740878 D ftsQ protein 740099..740878 Salinibacter ruber DSM 13855 3851359 YP_444706.1 CDS ftsA NC_007677.1 740991 742268 D identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 740991..742268 Salinibacter ruber DSM 13855 3853114 YP_444707.1 CDS ftsZ NC_007677.1 742476 743795 D identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 742476..743795 Salinibacter ruber DSM 13855 3851878 YP_444708.1 CDS SRU_0565 NC_007677.1 744291 745985 R identified by match to protein family HMM PF00082; Serine protease / subtilase peptidase complement(744291..745985) Salinibacter ruber DSM 13855 3852754 YP_444709.1 CDS SRU_0566 NC_007677.1 746024 746752 R hypothetical protein complement(746024..746752) Salinibacter ruber DSM 13855 3852126 YP_444710.1 CDS manC NC_007677.1 747297 748367 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase 747297..748367 Salinibacter ruber DSM 13855 3852491 YP_444711.1 CDS otsB NC_007677.1 748434 749201 R identified by match to protein family HMM PF02358; match to protein family HMM TIGR00685; match to protein family HMM TIGR01484; trehalose-phosphatase complement(748434..749201) Salinibacter ruber DSM 13855 3852391 YP_444712.1 CDS SRU_0569 NC_007677.1 749279 750865 R identified by match to protein family HMM PF00982; trehalose-6-phosphate synthase domain-containing protein complement(749279..750865) Salinibacter ruber DSM 13855 3850488 YP_444713.1 CDS SRU_0570 NC_007677.1 750862 751182 R hypothetical protein complement(750862..751182) Salinibacter ruber DSM 13855 3852802 YP_444714.1 CDS glpQ NC_007677.1 751241 752197 R identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase complement(751241..752197) Salinibacter ruber DSM 13855 3851611 YP_444715.1 CDS SRU_0572 NC_007677.1 752210 754534 R identified by match to protein family HMM PF00326; match to protein family HMM PF00930; dipeptidyl peptidase IV (DPP IV) complement(752210..754534) Salinibacter ruber DSM 13855 3852949 YP_444716.1 CDS alr NC_007677.1 754644 755996 D identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 754644..755996 Salinibacter ruber DSM 13855 3852801 YP_444717.1 CDS drrA NC_007677.1 756163 756876 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 756163..756876 Salinibacter ruber DSM 13855 3850849 YP_444718.1 CDS SRU_0575 NC_007677.1 757100 758404 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; phosphate regulon sensor protein phoR 757100..758404 Salinibacter ruber DSM 13855 3850592 YP_444719.1 CDS SRU_0576 NC_007677.1 758831 760933 D identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta 758831..760933 Salinibacter ruber DSM 13855 3851672 YP_444720.1 CDS SRU_0577 NC_007677.1 760949 761710 R hypothetical protein complement(760949..761710) Salinibacter ruber DSM 13855 3853079 YP_444721.1 CDS SRU_0578 NC_007677.1 762315 762419 R hypothetical protein complement(762315..762419) Salinibacter ruber DSM 13855 3853193 YP_444722.1 CDS SRU_0579 NC_007677.1 763329 763508 D hypothetical protein 763329..763508 Salinibacter ruber DSM 13855 3850364 YP_444723.1 CDS cysD NC_007677.1 764276 765181 D with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 764276..765181 Salinibacter ruber DSM 13855 3852367 YP_444724.1 CDS SRU_0581 NC_007677.1 765391 767310 D identified by match to protein family HMM PF00009; match to protein family HMM PF01583; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00455; match to protein family HMM TIGR02034; sulfate adenylyltransferase large subunit 765391..767310 Salinibacter ruber DSM 13855 3852600 YP_444725.1 CDS SRU_0582 NC_007677.1 767367 767855 D nucleotidyltransferase 767367..767855 Salinibacter ruber DSM 13855 3851209 YP_444726.1 CDS SRU_0583 NC_007677.1 767863 768261 D identified by match to protein family HMM PF01934; hypothetical protein 767863..768261 Salinibacter ruber DSM 13855 3852791 YP_444727.1 CDS SRU_0584 NC_007677.1 768344 770179 D identified by match to protein family HMM PF02080; sodium/sulfate symporter family protein 768344..770179 Salinibacter ruber DSM 13855 3850646 YP_444728.1 CDS SRU_0585 NC_007677.1 770288 770650 D hypothetical protein 770288..770650 Salinibacter ruber DSM 13855 3852554 YP_444729.1 CDS SRU_0586 NC_007677.1 771168 771506 D identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 771168..771506 Salinibacter ruber DSM 13855 3850534 YP_444730.1 CDS SRU_0587 NC_007677.1 771454 771894 D identified by match to protein family HMM PF05168; HEPN domain-containing protein 771454..771894 Salinibacter ruber DSM 13855 3851275 YP_444731.1 CDS rfbB NC_007677.1 771918 772946 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 771918..772946 Salinibacter ruber DSM 13855 3850496 YP_444732.1 CDS rfbA NC_007677.1 773169 774101 D identified by match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 773169..774101 Salinibacter ruber DSM 13855 3852226 YP_444733.1 CDS rfbC NC_007677.1 774130 774690 D identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 774130..774690 Salinibacter ruber DSM 13855 3851331 YP_444734.1 CDS rfbD NC_007677.1 774703 775611 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase 774703..775611 Salinibacter ruber DSM 13855 3851255 YP_444735.1 CDS SRU_0592 NC_007677.1 775936 778890 D identified by match to protein family HMM PF02563; capsule polysaccharide export system periplasmic protein 775936..778890 Salinibacter ruber DSM 13855 3852461 YP_444736.1 CDS SRU_0593 NC_007677.1 779468 779569 R hypothetical protein complement(779468..779569) Salinibacter ruber DSM 13855 3852548 YP_444737.1 CDS SRU_0594 NC_007677.1 781369 782676 D identified by match to protein family HMM PF02706; chain length determinant protein 781369..782676 Salinibacter ruber DSM 13855 3851836 YP_444738.1 CDS SRU_0595 NC_007677.1 782822 784225 D identified by match to protein family HMM PF00589; phage integrase family protein 782822..784225 Salinibacter ruber DSM 13855 3850698 YP_444739.1 CDS SRU_0596 NC_007677.1 784284 785603 D identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03721; UDP-glucose dehydrogenase 784284..785603 Salinibacter ruber DSM 13855 3850669 YP_444740.1 CDS SRU_0597 NC_007677.1 785762 786730 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate decarboxylase 785762..786730 Salinibacter ruber DSM 13855 3851373 YP_444741.1 CDS SRU_0598 NC_007677.1 786780 788597 D identified by match to protein family HMM PF00005; multidrug ABC transporter 786780..788597 Salinibacter ruber DSM 13855 3852287 YP_444742.1 CDS SRU_0599 NC_007677.1 788880 790355 D identified by match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; NDP-sugar dehydrogenase 788880..790355 Salinibacter ruber DSM 13855 3852508 YP_444743.1 CDS SRU_0600 NC_007677.1 790352 791347 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; nucleoside-diphosphate-sugar epimerase 790352..791347 Salinibacter ruber DSM 13855 3852819 YP_444744.1 CDS SRU_0601 NC_007677.1 791369 792565 D identified by match to protein family HMM PF01041; match to protein family HMM PF01212; perosamine synthetase 791369..792565 Salinibacter ruber DSM 13855 3851838 YP_444745.1 CDS SRU_0602 NC_007677.1 792693 793865 D identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase 792693..793865 Salinibacter ruber DSM 13855 3850459 YP_444746.1 CDS SRU_0603 NC_007677.1 793870 794766 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; formyltransferase 793870..794766 Salinibacter ruber DSM 13855 3852971 YP_444747.1 CDS SRU_0604 NC_007677.1 794763 795434 D identified by match to protein family HMM PF02585; hypothetical protein 794763..795434 Salinibacter ruber DSM 13855 3850745 YP_444748.1 CDS spsE NC_007677.1 795442 796512 D identified by match to protein family HMM PF03102; sialic acid synthase 795442..796512 Salinibacter ruber DSM 13855 3850845 YP_444749.1 CDS pglB NC_007677.1 796509 797138 D pilin glycosylation protein PglB 796509..797138 Salinibacter ruber DSM 13855 3852447 YP_444750.1 CDS SRU_0607 NC_007677.1 797148 798200 D identified by match to protein family HMM PF00483; match to protein family HMM PF00571; mannose-1-phosphate guanyltransferase 797148..798200 Salinibacter ruber DSM 13855 3852916 YP_444751.1 CDS SRU_0608 NC_007677.1 798197 798907 D identified by match to protein family HMM PF02348; CMP-N-acetlyneuraminic acid synthetase 798197..798907 Salinibacter ruber DSM 13855 3851164 YP_444752.1 CDS SRU_0609 NC_007677.1 800022 800789 R identified by match to protein family HMM PF01609; IS5 family transposase complement(800022..800789) Salinibacter ruber DSM 13855 3851282 YP_444753.1 CDS SRU_0610 NC_007677.1 800947 801414 D hypothetical protein 800947..801414 Salinibacter ruber DSM 13855 3853080 YP_444754.1 CDS SRU_0611 NC_007677.1 801600 803027 D hypothetical protein 801600..803027 Salinibacter ruber DSM 13855 3850793 YP_444755.1 CDS SRU_0613 NC_007677.1 806019 806651 D methyltransferase domain-containing protein 806019..806651 Salinibacter ruber DSM 13855 3852156 YP_444756.1 CDS SRU_0614 NC_007677.1 806744 807997 D hypothetical protein 806744..807997 Salinibacter ruber DSM 13855 3851774 YP_444757.1 CDS SRU_0615 NC_007677.1 809074 809835 D identified by match to protein family HMM PF00685; sulfotransferase domain-containing protein 809074..809835 Salinibacter ruber DSM 13855 3851205 YP_444758.1 CDS SRU_0616 NC_007677.1 809851 811047 D identified by match to protein family HMM PF00534; glycoside hydrolase 809851..811047 Salinibacter ruber DSM 13855 3850907 YP_444759.1 CDS SRU_0618 NC_007677.1 813785 814927 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; sugar epimerase BlmG 813785..814927 Salinibacter ruber DSM 13855 3851096 YP_444760.1 CDS SRU_0619 NC_007677.1 815116 816099 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate 5'-epimerase 815116..816099 Salinibacter ruber DSM 13855 3851861 YP_444761.1 CDS SRU_0620 NC_007677.1 816448 817815 D identified by match to protein family HMM PF00534; colanic acid biosynthesis glycosyl transferase 816448..817815 Salinibacter ruber DSM 13855 3851688 YP_444762.1 CDS SRU_0621 NC_007677.1 818100 819926 D identified by match to protein family HMM PF00953; glycosyltransferase 818100..819926 Salinibacter ruber DSM 13855 3852938 YP_444763.1 CDS SRU_0622 NC_007677.1 820642 821394 D identified by match to protein family HMM PF02397; glycosyltransferase 820642..821394 Salinibacter ruber DSM 13855 3851823 YP_444764.1 CDS SRU_0623 NC_007677.1 821458 822045 D hypothetical protein 821458..822045 Salinibacter ruber DSM 13855 3851220 YP_444765.1 CDS SRU_0625 NC_007677.1 824152 824262 D hypothetical protein 824152..824262 Salinibacter ruber DSM 13855 3851092 YP_444766.1 CDS SRU_0626 NC_007677.1 824475 826538 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase domain/SAM domain-containing protein complement(824475..826538) Salinibacter ruber DSM 13855 3850620 YP_444767.1 CDS SRU_0628 NC_007677.1 828427 828597 D killer protein 828427..828597 Salinibacter ruber DSM 13855 3851821 YP_444768.1 CDS higA NC_007677.1 828581 828898 D identified by match to protein family HMM PF01381; match to protein family HMM TIGR02607; addiction module antidote protein 828581..828898 Salinibacter ruber DSM 13855 3852989 YP_444769.1 CDS SRU_0630 NC_007677.1 829009 829698 R transcriptional regulator complement(829009..829698) Salinibacter ruber DSM 13855 3851436 YP_444770.1 CDS SRU_0631 NC_007677.1 830326 831219 D identified by match to protein family HMM PF01609; ISSru4, transposase 830326..831219 Salinibacter ruber DSM 13855 3853197 YP_444771.1 CDS SRU_0632 NC_007677.1 831883 832161 D IS1 family transposase insA 831883..832161 Salinibacter ruber DSM 13855 3853097 YP_444772.1 CDS SRU_0634 NC_007677.1 832683 833666 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein 832683..833666 Salinibacter ruber DSM 13855 3850441 YP_444773.1 CDS SRU_0635 NC_007677.1 833792 834139 D identified by match to protein family HMM PF03683; hypothetical protein 833792..834139 Salinibacter ruber DSM 13855 3851548 YP_444774.1 CDS SRU_0636 NC_007677.1 834190 834519 R hypothetical protein complement(834190..834519) Salinibacter ruber DSM 13855 3850932 YP_444775.1 CDS SRU_0637 NC_007677.1 834685 835239 D identified by match to protein family HMM PF04255; hypothetical protein 834685..835239 Salinibacter ruber DSM 13855 3850774 YP_444776.1 CDS SRU_0638 NC_007677.1 835397 835564 D hypothetical protein 835397..835564 Salinibacter ruber DSM 13855 3853146 YP_444777.1 CDS SRU_0639 NC_007677.1 835917 836162 D identified by match to protein family HMM TIGR01552; prevent-host-death family protein 835917..836162 Salinibacter ruber DSM 13855 3851782 YP_444778.1 CDS SRU_0640 NC_007677.1 836430 836831 D identified by match to protein family HMM PF01797; IS605 family transposase orfA 836430..836831 Salinibacter ruber DSM 13855 3852111 YP_444779.1 CDS SRU_0641 NC_007677.1 836835 837968 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase orfB 836835..837968 Salinibacter ruber DSM 13855 3851604 YP_444780.1 CDS SRU_0642 NC_007677.1 838610 838897 D identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 838610..838897 Salinibacter ruber DSM 13855 3853086 YP_444781.1 CDS SRU_0643 NC_007677.1 839713 840459 D identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 839713..840459 Salinibacter ruber DSM 13855 3853107 YP_444782.1 CDS SRU_0644 NC_007677.1 841709 841933 D hypothetical protein 841709..841933 Salinibacter ruber DSM 13855 3852435 YP_444783.1 CDS SRU_0645 NC_007677.1 843024 844457 D hypothetical protein 843024..844457 Salinibacter ruber DSM 13855 3852168 YP_444784.1 CDS SRU_0646 NC_007677.1 844564 845070 D identified by match to protein family HMM PF05685; hypothetical protein 844564..845070 Salinibacter ruber DSM 13855 3852476 YP_444785.1 CDS SRU_0647 NC_007677.1 845454 845933 D identified by match to protein family HMM PF01817; chorismate mutase 845454..845933 Salinibacter ruber DSM 13855 3852440 YP_444786.1 CDS SRU_0648 NC_007677.1 845906 846460 D hypothetical protein 845906..846460 Salinibacter ruber DSM 13855 3850542 YP_444787.1 CDS SRU_0649 NC_007677.1 846457 846711 D hypothetical protein 846457..846711 Salinibacter ruber DSM 13855 3852052 YP_444788.1 CDS SRU_0650 NC_007677.1 846923 847882 R identified by match to protein family HMM PF07719; hypothetical protein complement(846923..847882) Salinibacter ruber DSM 13855 3850375 YP_444789.1 CDS graD NC_007677.1 848219 849394 D identified by match to protein family HMM PF00483; glucose-1-phosphate thymidylyltransferase 848219..849394 Salinibacter ruber DSM 13855 3851546 YP_444790.1 CDS SRU_0652 NC_007677.1 849703 852162 D Function of MutS2 is unknown. It should not be considered a DNA mismatch repair protein. It is likely a DNA mismatch binding protein of unknown cellular function.; identified by match to protein family HMM PF00488; match to protein family HMM PF01713; match to protein family HMM TIGR01069; MutS2 family protein 849703..852162 Salinibacter ruber DSM 13855 3852167 YP_444791.1 CDS SRU_0653 NC_007677.1 852333 853298 D identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein 852333..853298 Salinibacter ruber DSM 13855 3852800 YP_444792.1 CDS SRU_0654 NC_007677.1 853483 853947 D hypothetical protein 853483..853947 Salinibacter ruber DSM 13855 3852972 YP_444793.1 CDS SRU_0655 NC_007677.1 854074 858180 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensory transduction histidine kinase 854074..858180 Salinibacter ruber DSM 13855 3851069 YP_444794.1 CDS SRU_0656 NC_007677.1 858199 859455 R identified by match to protein family HMM PF01435; caax prenyl protease 1 complement(858199..859455) Salinibacter ruber DSM 13855 3852076 YP_444795.1 CDS SRU_0657 NC_007677.1 859505 859831 D hypothetical protein 859505..859831 Salinibacter ruber DSM 13855 3850711 YP_444796.1 CDS SRU_0658 NC_007677.1 860716 861069 R identified by match to protein family HMM PF01381; helix-turn-helix domain-containing protein complement(860716..861069) Salinibacter ruber DSM 13855 3851293 YP_444797.1 CDS treZ NC_007677.1 861066 862838 R identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; malto-oligosyltrehalose trehalohydrolase complement(861066..862838) Salinibacter ruber DSM 13855 3852480 YP_444798.1 CDS malQ NC_007677.1 863029 864549 R identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase complement(863029..864549) Salinibacter ruber DSM 13855 3850692 YP_444799.1 CDS SRU_0661 NC_007677.1 864670 866325 R identified by match to protein family HMM PF03703; membrane flanked domain-containing protein complement(864670..866325) Salinibacter ruber DSM 13855 3851538 YP_444800.1 CDS SRU_0662 NC_007677.1 866382 866930 R identified by match to protein family HMM PF03703; integral membrane protein complement(866382..866930) Salinibacter ruber DSM 13855 3850376 YP_444801.1 CDS aroK NC_007677.1 867025 867639 R identified by match to protein family HMM PF01202; shikimate kinase complement(867025..867639) Salinibacter ruber DSM 13855 3851452 YP_444802.1 CDS truA NC_007677.1 867693 868490 D identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 867693..868490 Salinibacter ruber DSM 13855 3853143 YP_444803.1 CDS SRU_0665 NC_007677.1 868612 868839 D hypothetical protein 868612..868839 Salinibacter ruber DSM 13855 3852734 YP_444804.1 CDS SRU_0666 NC_007677.1 868908 870215 D identified by match to protein family HMM PF02274; amidinotransferase 868908..870215 Salinibacter ruber DSM 13855 3852494 YP_444805.1 CDS SRU_0667 NC_007677.1 870386 871369 D identified by match to protein family HMM PF01266; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase class-II 870386..871369 Salinibacter ruber DSM 13855 3852846 YP_444806.1 CDS SRU_0668 NC_007677.1 871725 872309 D hypothetical protein 871725..872309 Salinibacter ruber DSM 13855 3852412 YP_444807.1 CDS SRU_0669 NC_007677.1 872435 873973 R identified by match to protein family HMM PF02826; D-3-phosphoglycerate dehydrogenase complement(872435..873973) Salinibacter ruber DSM 13855 3851476 YP_444808.1 CDS sucD NC_007677.1 873995 874861 R identified by match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase subunit alpha complement(873995..874861) Salinibacter ruber DSM 13855 3852087 YP_444809.1 CDS SRU_0671 NC_007677.1 875168 876712 R identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; amidase complement(875168..876712) Salinibacter ruber DSM 13855 3851622 YP_444810.1 CDS SRU_0672 NC_007677.1 876806 877210 R identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; sec-independent protein transporter complement(876806..877210) Salinibacter ruber DSM 13855 3851918 YP_444811.1 CDS add NC_007677.1 877367 878557 D identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430; adenosine deaminase 877367..878557 Salinibacter ruber DSM 13855 3851369 YP_444812.1 CDS aroA NC_007677.1 878852 880144 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 878852..880144 Salinibacter ruber DSM 13855 3852115 YP_444813.1 CDS SRU_0675 NC_007677.1 880320 881084 R hypothetical protein complement(880320..881084) Salinibacter ruber DSM 13855 3852225 YP_444814.1 CDS SRU_0676 NC_007677.1 881226 882239 R identified by match to protein family HMM PF00582; universal stress protein complement(881226..882239) Salinibacter ruber DSM 13855 3852863 YP_444815.1 CDS SRU_0677 NC_007677.1 882212 882865 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; response regulator receiver domain-containing protein complement(882212..882865) Salinibacter ruber DSM 13855 3851395 YP_444816.1 CDS SRU_0678 NC_007677.1 883061 884329 R identified by match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF07730; match to protein family HMM TIGR00229; sensor protein fixL complement(883061..884329) Salinibacter ruber DSM 13855 3852605 YP_444817.1 CDS SRU_0679 NC_007677.1 885029 885520 D identified by match to protein family HMM PF00582; universal stress protein 885029..885520 Salinibacter ruber DSM 13855 3852074 YP_444818.1 CDS SRU_0680 NC_007677.1 885566 886507 D DNA-binding protein 885566..886507 Salinibacter ruber DSM 13855 3850535 YP_444819.1 CDS SRU_0681 NC_007677.1 886554 887504 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 886554..887504 Salinibacter ruber DSM 13855 3852560 YP_444820.1 CDS ispG NC_007677.1 887568 888941 R identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(887568..888941) Salinibacter ruber DSM 13855 3852207 YP_444821.1 CDS SRU_0683 NC_007677.1 888898 889746 R identified by match to protein family HMM PF01694; S54 family peptidase complement(888898..889746) Salinibacter ruber DSM 13855 3852375 YP_444822.1 CDS SRU_0684 NC_007677.1 890155 890883 R identified by match to protein family HMM PF01694; cytoplasmic membrane protein complement(890155..890883) Salinibacter ruber DSM 13855 3851616 YP_444823.1 CDS SRU_0685 NC_007677.1 890971 891726 D identified by match to protein family HMM PF00149; serine/threonine protein phosphatase family protein 890971..891726 Salinibacter ruber DSM 13855 3851398 YP_444824.1 CDS SRU_0686 NC_007677.1 891778 894153 D identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase domain-containing protein 891778..894153 Salinibacter ruber DSM 13855 3850469 YP_444825.1 CDS SRU_0687 NC_007677.1 894181 895542 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00619; nuclease SbcCD 894181..895542 Salinibacter ruber DSM 13855 3850565 YP_444826.1 CDS SRU_0688 NC_007677.1 895643 896308 D hypothetical protein 895643..896308 Salinibacter ruber DSM 13855 3852940 YP_444827.1 CDS ispE NC_007677.1 896446 897417 R identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(896446..897417) Salinibacter ruber DSM 13855 3851712 YP_444828.2 CDS thrB NC_007677.1 897377 898336 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(897377..898336) Salinibacter ruber DSM 13855 3852821 YP_444829.1 CDS thrA NC_007677.1 898488 900953 R multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I complement(898488..900953) Salinibacter ruber DSM 13855 3851022 YP_444830.1 CDS SRU_0692 NC_007677.1 901062 901919 R identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; purine nucleoside phosphorylase I complement(901062..901919) Salinibacter ruber DSM 13855 3850487 YP_444831.1 CDS SRU_0693 NC_007677.1 901974 903080 R hypothetical protein complement(901974..903080) Salinibacter ruber DSM 13855 3851294 YP_444832.1 CDS SRU_0694 NC_007677.1 903361 904062 R identified by similarity to GB:AAR35917.1; match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein complement(903361..904062) Salinibacter ruber DSM 13855 3852876 YP_444833.1 CDS SRU_0695 NC_007677.1 904237 904467 R hypothetical protein complement(904237..904467) Salinibacter ruber DSM 13855 3852927 YP_444834.1 CDS SRU_0696 NC_007677.1 904509 907055 R identified by match to protein family HMM PF02687; permease complement(904509..907055) Salinibacter ruber DSM 13855 3852835 YP_444835.1 CDS SRU_0697 NC_007677.1 907202 907714 R identified by match to protein family HMM PF01590; GAF domain-containing protein complement(907202..907714) Salinibacter ruber DSM 13855 3850993 YP_444836.1 CDS SRU_0698 NC_007677.1 907782 908066 R identified by match to protein family HMM PF04248; hypothetical protein complement(907782..908066) Salinibacter ruber DSM 13855 3853014 YP_444837.1 CDS SRU_0699 NC_007677.1 908547 908756 R hypothetical protein complement(908547..908756) Salinibacter ruber DSM 13855 3852202 YP_444838.1 CDS SRU_0700 NC_007677.1 909053 910060 R ABC transporter periplasmic binding component complement(909053..910060) Salinibacter ruber DSM 13855 3851433 YP_444839.1 CDS SRU_0701 NC_007677.1 910850 911512 D identified by match to protein family HMM PF00175; match to protein family HMM PF00970; phenol hydroxylase 910850..911512 Salinibacter ruber DSM 13855 3852085 YP_444840.1 CDS SRU_0702 NC_007677.1 911811 913088 D hypothetical protein 911811..913088 Salinibacter ruber DSM 13855 3852038 YP_444841.1 CDS trkA NC_007677.1 913164 913895 D identified by match to protein family HMM PF02254; TRK potassium uptake system protein 913164..913895 Salinibacter ruber DSM 13855 3852105 YP_444842.1 CDS SRU_0704 NC_007677.1 913998 914312 R hypothetical protein complement(913998..914312) Salinibacter ruber DSM 13855 3851641 YP_444843.1 CDS SRU_0705 NC_007677.1 914604 915128 R hypothetical protein complement(914604..915128) Salinibacter ruber DSM 13855 3851100 YP_444844.1 CDS SRU_0706 NC_007677.1 915162 915563 R hypothetical protein complement(915162..915563) Salinibacter ruber DSM 13855 3850835 YP_444845.1 CDS SRU_0707 NC_007677.1 915610 916809 R hypothetical protein complement(915610..916809) Salinibacter ruber DSM 13855 3851698 YP_444846.1 CDS SRU_0708 NC_007677.1 916834 917226 R hypothetical protein complement(916834..917226) Salinibacter ruber DSM 13855 3850458 YP_444847.1 CDS SRU_0709 NC_007677.1 918881 920032 D identified by match to protein family HMM PF00107; IMP dehydrogenase/GMP reductase 918881..920032 Salinibacter ruber DSM 13855 3851759 YP_444848.1 CDS SRU_0710 NC_007677.1 920073 921140 R identified by match to protein family HMM PF00107; zinc-containing alcohol dehydrogenase complement(920073..921140) Salinibacter ruber DSM 13855 3852151 YP_444849.1 CDS SRU_0711 NC_007677.1 921307 921780 R hypothetical protein complement(921307..921780) Salinibacter ruber DSM 13855 3852201 YP_444850.1 CDS SRU_0712 NC_007677.1 922252 922530 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 922252..922530 Salinibacter ruber DSM 13855 3852545 YP_444851.1 CDS SRU_0713 NC_007677.1 922494 922970 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 922494..922970 Salinibacter ruber DSM 13855 3851409 YP_444852.1 CDS SRU_0714 NC_007677.1 923101 923817 D identified by match to protein family HMM PF00338; ribosomal protein S10p/S20e 923101..923817 Salinibacter ruber DSM 13855 3850887 YP_444853.1 CDS SRU_0715 NC_007677.1 923873 924583 D identified by match to protein family HMM PF00929; exonuclease 923873..924583 Salinibacter ruber DSM 13855 3851835 YP_444854.1 CDS ssb NC_007677.1 924748 925260 D identified by similarity to SP:P02339; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 924748..925260 Salinibacter ruber DSM 13855 3850759 YP_444855.1 CDS SRU_0717 NC_007677.1 925441 926994 D identified by match to protein family HMM PF00221; phenylalanine and histidine ammonia-lyase 925441..926994 Salinibacter ruber DSM 13855 3853153 YP_444856.1 CDS SRU_0718 NC_007677.1 927059 929626 D identified by match to protein family HMM PF00580; ATP-dependent DNA helicase 927059..929626 Salinibacter ruber DSM 13855 3852276 YP_444857.1 CDS SRU_0719 NC_007677.1 929787 930305 R hypothetical protein complement(929787..930305) Salinibacter ruber DSM 13855 3851050 YP_444858.1 CDS SRU_0720 NC_007677.1 931407 931841 R hypothetical protein complement(931407..931841) Salinibacter ruber DSM 13855 3850344 YP_444859.1 CDS SRU_0721 NC_007677.1 931852 933105 R identified by match to protein family HMM PF01266; match to protein family HMM PF01593; oxidoreductase, FAD-binding complement(931852..933105) Salinibacter ruber DSM 13855 3851989 YP_444860.1 CDS hutH NC_007677.1 933270 934763 D identified by match to protein family HMM PF00221; match to protein family HMM TIGR01225; histidine ammonia-lyase 933270..934763 Salinibacter ruber DSM 13855 3852739 YP_444861.1 CDS SRU_0723 NC_007677.1 934902 936284 R identified by match to protein family HMM PF01370; match to protein family HMM PF03364; match to protein family HMM TIGR01777; hypothetical protein complement(934902..936284) Salinibacter ruber DSM 13855 3852183 YP_444862.1 CDS SRU_0724 NC_007677.1 936579 937691 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; HlyD-like secretion protein 936579..937691 Salinibacter ruber DSM 13855 3852384 YP_444863.1 CDS SRU_0725 NC_007677.1 937760 940984 D identified by match to protein family HMM PF00873; multidrug resistance protein 937760..940984 Salinibacter ruber DSM 13855 3851462 YP_444864.1 CDS SRU_0726 NC_007677.1 941052 942455 D identified by match to protein family HMM PF02321; outer membrane protein TolC 941052..942455 Salinibacter ruber DSM 13855 3851947 YP_444865.1 CDS hisG NC_007677.1 942493 943344 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(942493..943344) Salinibacter ruber DSM 13855 3852975 YP_444866.1 CDS hisE NC_007677.1 943469 943732 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(943469..943732) Salinibacter ruber DSM 13855 3851473 YP_444867.1 CDS SRU_0729 NC_007677.1 944011 944610 D identified by match to protein family HMM PF02632; bioY family protein 944011..944610 Salinibacter ruber DSM 13855 3852677 YP_444868.1 CDS SRU_0730 NC_007677.1 944660 944854 R identified by match to protein family HMM TIGR01552; prevent-host-death family protein complement(944660..944854) Salinibacter ruber DSM 13855 3852524 YP_444869.1 CDS SRU_0731 NC_007677.1 945064 945540 R identified by match to protein family HMM PF03400; ISSru3, transposase insB complement(945064..945540) Salinibacter ruber DSM 13855 3851091 YP_444870.1 CDS SRU_0732 NC_007677.1 945504 945782 R identified by match to protein family HMM TIGR01199; ISSru3, transposase insA complement(945504..945782) Salinibacter ruber DSM 13855 3851285 YP_444871.1 CDS SRU_0733 NC_007677.1 946412 946945 D hypothetical protein 946412..946945 Salinibacter ruber DSM 13855 3850750 YP_444872.1 CDS SRU_0734 NC_007677.1 947067 947513 D hypothetical protein 947067..947513 Salinibacter ruber DSM 13855 3852037 YP_444873.1 CDS xseB NC_007677.1 947618 947887 R identified by match to protein family HMM PF02609; exodeoxyribonuclease VII small subunit complement(947618..947887) Salinibacter ruber DSM 13855 3851637 YP_444874.1 CDS SRU_0736 NC_007677.1 947999 948772 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 947999..948772 Salinibacter ruber DSM 13855 3851921 YP_444875.1 CDS SRU_0737 NC_007677.1 948782 949921 R hypothetical protein complement(948782..949921) Salinibacter ruber DSM 13855 3850357 YP_444876.1 CDS xseA NC_007677.1 950148 951344 R identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit complement(950148..951344) Salinibacter ruber DSM 13855 3851327 YP_444877.1 CDS SRU_0739 NC_007677.1 951619 952158 D identified by match to protein family HMM PF01451; low molecular weight protein-tyrosine-phosphatase 951619..952158 Salinibacter ruber DSM 13855 3851561 YP_444878.1 CDS SRU_0740 NC_007677.1 952175 953107 D identified by match to protein family HMM PF01636; match to protein family HMM PF03881; phosphotransferase family protein 952175..953107 Salinibacter ruber DSM 13855 3850351 YP_444879.1 CDS SRU_0741 NC_007677.1 953128 953748 R identified by match to protein family HMM PF00111; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(953128..953748) Salinibacter ruber DSM 13855 3852715 YP_444880.1 CDS brp NC_007677.1 953761 954645 R bacteriorhodopsin-like protein complement(953761..954645) Salinibacter ruber DSM 13855 3851394 YP_444881.1 CDS SRU_0743 NC_007677.1 954849 956324 R identified by match to protein family HMM PF01266; match to protein family HMM PF01593; phytoene dehydrogenase and-like proteins complement(954849..956324) Salinibacter ruber DSM 13855 3851489 YP_444882.1 CDS ftsQ NC_007677.1 956421 957224 R hypothetical protein complement(956421..957224) Salinibacter ruber DSM 13855 3850659 YP_444883.1 CDS hemN NC_007677.1 957306 958688 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 957306..958688 Salinibacter ruber DSM 13855 3850680 YP_444884.1 CDS SRU_0747 NC_007677.1 958737 960230 D hypothetical protein 958737..960230 Salinibacter ruber DSM 13855 3852901 YP_444885.1 CDS SRU_0748 NC_007677.1 960190 960837 D identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; rrf2 family transcriptional regulator 960190..960837 Salinibacter ruber DSM 13855 3851353 YP_444886.1 CDS SRU_0749 NC_007677.1 960869 961615 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; response regulator complement(960869..961615) Salinibacter ruber DSM 13855 3851191 YP_444887.1 CDS SRU_0750 NC_007677.1 961658 962797 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; histidine kinase family protein complement(961658..962797) Salinibacter ruber DSM 13855 3850359 YP_444888.1 CDS SRU_0751 NC_007677.1 962841 963671 R identified by match to protein family HMM PF01061; integral membrane protein complement(962841..963671) Salinibacter ruber DSM 13855 3852069 YP_444889.1 CDS SRU_0752 NC_007677.1 963696 964664 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(963696..964664) Salinibacter ruber DSM 13855 3852326 YP_444890.1 CDS SRU_0753 NC_007677.1 964704 965570 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(964704..965570) Salinibacter ruber DSM 13855 3850739 YP_444891.1 CDS SRU_0754 NC_007677.1 965628 967838 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor protein complement(965628..967838) Salinibacter ruber DSM 13855 3851467 YP_444892.1 CDS SRU_0755 NC_007677.1 968062 968250 R hypothetical protein complement(968062..968250) Salinibacter ruber DSM 13855 3852678 YP_444893.1 CDS bioB NC_007677.1 968906 969985 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase complement(968906..969985) Salinibacter ruber DSM 13855 3851287 YP_444894.1 CDS SRU_0757 NC_007677.1 969982 971118 R hypothetical protein complement(969982..971118) Salinibacter ruber DSM 13855 3851518 YP_444895.1 CDS SRU_0758 NC_007677.1 971226 971693 D hypothetical protein 971226..971693 Salinibacter ruber DSM 13855 3853172 YP_444896.1 CDS SRU_0759 NC_007677.1 971923 974196 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensory transduction histidine kinase 971923..974196 Salinibacter ruber DSM 13855 3850710 YP_444897.1 CDS SRU_0760 NC_007677.1 974405 975343 D identified by match to protein family HMM PF00294; carbohydrate kinase 974405..975343 Salinibacter ruber DSM 13855 3850379 YP_444898.1 CDS folB NC_007677.1 975403 975831 D identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 975403..975831 Salinibacter ruber DSM 13855 3851495 YP_444899.1 CDS SRU_0762 NC_007677.1 975839 976693 R identified by match to protein family HMM PF00117; glutamine amidotransferase complement(975839..976693) Salinibacter ruber DSM 13855 3850840 YP_444900.1 CDS maf NC_007677.1 976805 977521 R identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf complement(976805..977521) Salinibacter ruber DSM 13855 3851971 YP_444901.1 CDS SRU_0764 NC_007677.1 977607 978464 D identified by match to protein family HMM PF01656; Soj family protein 977607..978464 Salinibacter ruber DSM 13855 3850476 YP_444902.1 CDS SRU_0765 NC_007677.1 978544 978870 R hypothetical protein complement(978544..978870) Salinibacter ruber DSM 13855 3850848 YP_444903.1 CDS SRU_0766 NC_007677.1 978923 980380 R identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter complement(978923..980380) Salinibacter ruber DSM 13855 3850547 YP_444904.1 CDS SRU_0767 NC_007677.1 980578 981768 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; N-acyl-L-amino acid amidohydrolase 980578..981768 Salinibacter ruber DSM 13855 3852123 YP_444905.1 CDS SRU_0768 NC_007677.1 981797 982453 R esterase/lipase complement(981797..982453) Salinibacter ruber DSM 13855 3852533 YP_444906.1 CDS SRU_0769 NC_007677.1 982500 983474 R identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; lysine decarboxylase-like protein complement(982500..983474) Salinibacter ruber DSM 13855 3853075 YP_444907.1 CDS SRU_0770 NC_007677.1 983772 984956 R identified by match to protein family HMM PF08007; cupin superfamily protein complement(983772..984956) Salinibacter ruber DSM 13855 3851463 YP_444908.1 CDS SRU_0771 NC_007677.1 985121 985309 R hypothetical protein complement(985121..985309) Salinibacter ruber DSM 13855 3851513 YP_444909.1 CDS SRU_0772 NC_007677.1 985351 985539 R hypothetical protein complement(985351..985539) Salinibacter ruber DSM 13855 3851185 YP_444910.1 CDS SRU_0773 NC_007677.1 985674 986375 D hypothetical protein 985674..986375 Salinibacter ruber DSM 13855 3852728 YP_444911.1 CDS SRU_0774 NC_007677.1 986422 986748 D hypothetical protein 986422..986748 Salinibacter ruber DSM 13855 3853123 YP_444912.1 CDS glyA NC_007677.1 986911 988209 D identified by match to protein family HMM PF00464; match to protein family HMM PF01212; serine hydroxymethyltransferase 986911..988209 Salinibacter ruber DSM 13855 3852710 YP_444913.1 CDS SRU_0776 NC_007677.1 988413 988916 D identified by match to protein family HMM PF00156; orotate phosphoribosyltransferase 988413..988916 Salinibacter ruber DSM 13855 3853141 YP_444914.1 CDS tatC NC_007677.1 989070 989834 D identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 989070..989834 Salinibacter ruber DSM 13855 3850679 YP_444915.1 CDS prc NC_007677.1 989874 991529 D identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxy-terminal peptidase 989874..991529 Salinibacter ruber DSM 13855 3851522 YP_444916.1 CDS SRU_0778 NC_007677.1 991493 991585 R hypothetical protein complement(991493..991585) Salinibacter ruber DSM 13855 3853158 YP_444917.1 CDS SRU_0780 NC_007677.1 991910 992521 D hypothetical protein 991910..992521 Salinibacter ruber DSM 13855 3852420 YP_444918.1 CDS SRU_0781 NC_007677.1 992609 993046 D identified by match to protein family HMM PF00293; MutT/nudix family protein 992609..993046 Salinibacter ruber DSM 13855 3853150 YP_444919.1 CDS SRU_0783 NC_007677.1 993415 994191 R identified by match to protein family HMM PF00582; universal stress protein complement(993415..994191) Salinibacter ruber DSM 13855 3851132 YP_444920.1 CDS SRU_0784 NC_007677.1 994617 997616 R hypothetical protein complement(994617..997616) Salinibacter ruber DSM 13855 3852640 YP_444921.1 CDS SRU_0785 NC_007677.1 997594 998577 R identified by match to protein family HMM PF00480; xylose repressor complement(997594..998577) Salinibacter ruber DSM 13855 3850390 YP_444922.1 CDS SRU_0786 NC_007677.1 998662 998958 R identified by match to protein family HMM PF04977; septum formation initiator superfamily protein complement(998662..998958) Salinibacter ruber DSM 13855 3850784 YP_444923.1 CDS eno NC_007677.1 998974 1000263 R identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase complement(998974..1000263) Salinibacter ruber DSM 13855 3851834 YP_444924.1 CDS SRU_0788 NC_007677.1 1000524 1001747 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(1000524..1001747) Salinibacter ruber DSM 13855 3851135 YP_444925.1 CDS SRU_0789 NC_007677.1 1002013 1003185 R hypothetical protein complement(1002013..1003185) Salinibacter ruber DSM 13855 3852288 YP_444926.1 CDS SRU_0790 NC_007677.1 1003402 1004796 R hypothetical protein complement(1003402..1004796) Salinibacter ruber DSM 13855 3852158 YP_444927.1 CDS SRU_0791 NC_007677.1 1004989 1005780 R glycogen synthase complement(1004989..1005780) Salinibacter ruber DSM 13855 3850548 YP_444928.1 CDS SRU_0792 NC_007677.1 1006660 1007424 D identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein lolD 1006660..1007424 Salinibacter ruber DSM 13855 3852327 YP_444929.1 CDS SRU_0794 NC_007677.1 1007494 1007868 D hypothetical protein 1007494..1007868 Salinibacter ruber DSM 13855 3851402 YP_444930.1 CDS SRU_0793 NC_007677.1 1007865 1008725 R hypothetical protein complement(1007865..1008725) Salinibacter ruber DSM 13855 3850944 YP_444931.1 CDS SRU_0795 NC_007677.1 1008825 1010060 R hypothetical protein complement(1008825..1010060) Salinibacter ruber DSM 13855 3852689 YP_444932.2 CDS lipA NC_007677.1 1010140 1011138 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(1010140..1011138) Salinibacter ruber DSM 13855 3852772 YP_444933.1 CDS SRU_0797 NC_007677.1 1011372 1011962 R identified by match to protein family HMM PF00583; acetyltransferase complement(1011372..1011962) Salinibacter ruber DSM 13855 3852650 YP_444934.1 CDS SRU_0798 NC_007677.1 1012179 1013894 D identified by match to protein family HMM PF07969; amidohydrolase 1012179..1013894 Salinibacter ruber DSM 13855 3851104 YP_444935.1 CDS SRU_0799 NC_007677.1 1013977 1015365 D catalyzes the formation of 2-aminoadipate 6-semiladehyde and glutamate from lysine and 2-oxoglutarate; L-lysine aminotransferase 1013977..1015365 Salinibacter ruber DSM 13855 3852964 YP_444936.1 CDS recN NC_007677.1 1015436 1017154 R identified by match to protein family HMM TIGR00634; DNA repair protein RecN complement(1015436..1017154) Salinibacter ruber DSM 13855 3852086 YP_444937.1 CDS secA NC_007677.1 1017294 1020776 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA complement(1017294..1020776) Salinibacter ruber DSM 13855 3852718 YP_444938.1 CDS SRU_0802 NC_007677.1 1020794 1022029 D identified by match to protein family HMM PF00582; universal stress protein 1020794..1022029 Salinibacter ruber DSM 13855 3852382 YP_444939.1 CDS SRU_0803 NC_007677.1 1022104 1022997 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase family site specific recombinase complement(1022104..1022997) Salinibacter ruber DSM 13855 3851516 YP_444940.1 CDS corA NC_007677.1 1023513 1024697 D identified by match to protein family HMM PF01544; match to protein family HMM TIGR00383; magnesium and cobalt transport protein CorA 1023513..1024697 Salinibacter ruber DSM 13855 3851329 YP_444941.1 CDS SRU_0805 NC_007677.1 1024815 1025387 D hypothetical protein 1024815..1025387 Salinibacter ruber DSM 13855 3851109 YP_444942.1 CDS SRU_0806 NC_007677.1 1025567 1026613 D identified by match to protein family HMM PF07396; phosphate-selective porin O and P superfamily protein 1025567..1026613 Salinibacter ruber DSM 13855 3851500 YP_444943.1 CDS SRU_0807 NC_007677.1 1026708 1027448 R hypothetical protein complement(1026708..1027448) Salinibacter ruber DSM 13855 3852009 YP_444944.1 CDS SRU_0808 NC_007677.1 1027509 1028387 R identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein complement(1027509..1028387) Salinibacter ruber DSM 13855 3850562 YP_444945.1 CDS SRU_0809 NC_007677.1 1028428 1029471 R hypothetical protein complement(1028428..1029471) Salinibacter ruber DSM 13855 3851306 YP_444946.1 CDS SRU_0810 NC_007677.1 1029616 1031433 D identified by match to protein family HMM PF02080; TrkA domain-containing protein 1029616..1031433 Salinibacter ruber DSM 13855 3851273 YP_444947.1 CDS SRU_0811 NC_007677.1 1031637 1033556 R identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; 2-oxo acid dehydrogenase acyltransferase catalytic subunit complement(1031637..1033556) Salinibacter ruber DSM 13855 3851338 YP_444948.1 CDS hppA NC_007677.1 1033546 1035945 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1033546..1035945 Salinibacter ruber DSM 13855 3851825 YP_444949.1 CDS SRU_0813 NC_007677.1 1036035 1036601 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1036035..1036601) Salinibacter ruber DSM 13855 3850678 YP_444950.1 CDS SRU_0814 NC_007677.1 1036702 1037454 R identified by match to protein family HMM TIGR00731; 50S ribosomal protein L25 complement(1036702..1037454) Salinibacter ruber DSM 13855 3852875 YP_444951.1 CDS SRU_0815 NC_007677.1 1037621 1038583 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase complement(1037621..1038583) Salinibacter ruber DSM 13855 3852726 YP_444952.1 CDS SRU_0817 NC_007677.1 1038837 1040177 R identified by match to protein family HMM PF00293; match to protein family HMM PF01008; translation initiation factor eIF-2B alpha subunit complement(1038837..1040177) Salinibacter ruber DSM 13855 3852041 YP_444953.1 CDS SRU_0818 NC_007677.1 1040119 1041702 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; TPR-containing protein Mql1 1040119..1041702 Salinibacter ruber DSM 13855 3851370 YP_444954.1 CDS SRU_0819 NC_007677.1 1041874 1042497 D hypothetical protein 1041874..1042497 Salinibacter ruber DSM 13855 3852441 YP_444955.1 CDS SRU_0820 NC_007677.1 1042568 1042873 R identified by match to protein family HMM PF01106; hypothetical protein complement(1042568..1042873) Salinibacter ruber DSM 13855 3850748 YP_444956.1 CDS mrp NC_007677.1 1043019 1044143 R mrp protein complement(1043019..1044143) Salinibacter ruber DSM 13855 3850367 YP_444957.1 CDS SRU_0822 NC_007677.1 1044392 1045399 R identified by match to protein family HMM PF02541; Ppx/GppA phosphatase family protein complement(1044392..1045399) Salinibacter ruber DSM 13855 3851002 YP_444958.1 CDS prmA NC_007677.1 1045360 1046202 R identified by match to protein family HMM PF05175; match to protein family HMM PF06325; 50S ribosomal protein L11 methyltransferase complement(1045360..1046202) Salinibacter ruber DSM 13855 3852565 YP_444959.1 CDS ubiE NC_007677.1 1046228 1046962 R identified by match to protein family HMM PF01209; match to protein family HMM PF02353; match to protein family HMM TIGR01934; ubiquinone/menaquinone biosynthesis methyltransferase UbiE complement(1046228..1046962) Salinibacter ruber DSM 13855 3850806 YP_444960.1 CDS pfkA NC_007677.1 1047272 1048354 R identified by match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase complement(1047272..1048354) Salinibacter ruber DSM 13855 3851480 YP_444961.1 CDS SRU_0826 NC_007677.1 1048317 1049282 R hypothetical protein complement(1048317..1049282) Salinibacter ruber DSM 13855 3850671 YP_444962.1 CDS aat NC_007677.1 1049320 1050000 R leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase complement(1049320..1050000) Salinibacter ruber DSM 13855 3852793 YP_444963.1 CDS pycA NC_007677.1 1050092 1050652 D identified by match to protein family HMM PF00364; pyruvate carboxylase 1050092..1050652 Salinibacter ruber DSM 13855 3852173 YP_444964.1 CDS dfrA NC_007677.1 1050649 1051683 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; dihydroflavonol 4-reductase 1050649..1051683 Salinibacter ruber DSM 13855 3850395 YP_444965.1 CDS SRU_0830 NC_007677.1 1052108 1052359 R hypothetical protein complement(1052108..1052359) Salinibacter ruber DSM 13855 3852610 YP_444966.1 CDS SRU_0831 NC_007677.1 1052717 1053358 D hypothetical protein 1052717..1053358 Salinibacter ruber DSM 13855 3850877 YP_444967.1 CDS SRU_0832 NC_007677.1 1053418 1054071 D hypothetical protein 1053418..1054071 Salinibacter ruber DSM 13855 3850781 YP_444968.1 CDS SRU_0833 NC_007677.1 1054200 1056293 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; chemotaxis transducer complement(1054200..1056293) Salinibacter ruber DSM 13855 3851072 YP_444969.1 CDS SRU_0834 NC_007677.1 1056663 1060094 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two component system histidine kinase complement(1056663..1060094) Salinibacter ruber DSM 13855 3852982 YP_444970.1 CDS SRU_0835 NC_007677.1 1061013 1063751 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component hybrid sensor and regulator 1061013..1063751 Salinibacter ruber DSM 13855 3851088 YP_444971.1 CDS SRU_0836 NC_007677.1 1064027 1066117 D identified by match to protein family HMM PF00072; match to protein family HMM PF02518; response regulator receiver domain-containing protein 1064027..1066117 Salinibacter ruber DSM 13855 3852067 YP_444972.1 CDS SRU_0837 NC_007677.1 1066209 1068737 R identified by match to protein family HMM PF00282; tyrosine decarboxylase complement(1066209..1068737) Salinibacter ruber DSM 13855 3851867 YP_444973.1 CDS SRU_0838 NC_007677.1 1068969 1069454 D identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 1068969..1069454 Salinibacter ruber DSM 13855 3852758 YP_444974.1 CDS hisS NC_007677.1 1069525 1070832 D identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 1069525..1070832 Salinibacter ruber DSM 13855 3850449 YP_444975.1 CDS SRU_0840 NC_007677.1 1070963 1072123 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1070963..1072123 Salinibacter ruber DSM 13855 3852122 YP_444976.1 CDS SRU_0841 NC_007677.1 1072622 1073986 R identified by match to protein family HMM PF01593; amine oxidase complement(1072622..1073986) Salinibacter ruber DSM 13855 3851552 YP_444977.1 CDS SRU_0842 NC_007677.1 1073970 1075565 R hypothetical protein complement(1073970..1075565) Salinibacter ruber DSM 13855 3850880 YP_444978.1 CDS SRU_0843 NC_007677.1 1075605 1076864 R hypothetical protein complement(1075605..1076864) Salinibacter ruber DSM 13855 3852499 YP_444979.1 CDS SRU_0844 NC_007677.1 1076943 1079504 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent outer membrane protein complement(1076943..1079504) Salinibacter ruber DSM 13855 3852648 YP_444980.1 CDS SRU_0845 NC_007677.1 1079554 1079790 R hypothetical protein complement(1079554..1079790) Salinibacter ruber DSM 13855 3851718 YP_444981.1 CDS glgB NC_007677.1 1079966 1081834 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(1079966..1081834) Salinibacter ruber DSM 13855 3850951 YP_444982.1 CDS SRU_0847 NC_007677.1 1081880 1085338 R identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; trehalose synthase complement(1081880..1085338) Salinibacter ruber DSM 13855 3852261 YP_444983.1 CDS SRU_0848 NC_007677.1 1085352 1087343 R alpha amylase family protein complement(1085352..1087343) Salinibacter ruber DSM 13855 3853124 YP_444984.1 CDS glgX NC_007677.1 1087502 1089796 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching protein GlgX 1087502..1089796 Salinibacter ruber DSM 13855 3850422 YP_444985.1 CDS gfo NC_007677.1 1089816 1091213 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; match to protein family HMM TIGR01409; glucose-fructose oxidoreductase 1089816..1091213 Salinibacter ruber DSM 13855 3851411 YP_444986.1 CDS SRU_0851 NC_007677.1 1091707 1093263 D hypothetical protein 1091707..1093263 Salinibacter ruber DSM 13855 3852496 YP_444987.1 CDS SRU_0852 NC_007677.1 1093356 1096190 D identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein 1093356..1096190 Salinibacter ruber DSM 13855 3851539 YP_444988.1 CDS SRU_0853 NC_007677.1 1096099 1096992 D identified by match to protein family HMM PF01609; ISSru4, transposase 1096099..1096992 Salinibacter ruber DSM 13855 3852214 YP_444989.1 CDS SRU_0854 NC_007677.1 1097120 1097521 R identified by match to protein family HMM PF00072; mutant NtrC-like activator complement(1097120..1097521) Salinibacter ruber DSM 13855 3850797 YP_444990.1 CDS SRU_0855 NC_007677.1 1098230 1098907 R identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TRK potassium uptake system protein complement(1098230..1098907) Salinibacter ruber DSM 13855 3852575 YP_444991.1 CDS SRU_0857 NC_007677.1 1099984 1101171 D DNA polymerase III subunit delta' 1099984..1101171 Salinibacter ruber DSM 13855 3851609 YP_444992.1 CDS SRU_0858 NC_007677.1 1101287 1102054 D hypothetical protein 1101287..1102054 Salinibacter ruber DSM 13855 3851998 YP_444993.1 CDS SRU_0859 NC_007677.1 1102240 1103034 D hypothetical protein 1102240..1103034 Salinibacter ruber DSM 13855 3851057 YP_444994.1 CDS SRU_0860 NC_007677.1 1103080 1103883 D hypothetical protein 1103080..1103883 Salinibacter ruber DSM 13855 3852130 YP_444995.1 CDS SRU_0861 NC_007677.1 1103901 1105730 D hypothetical protein 1103901..1105730 Salinibacter ruber DSM 13855 3850573 YP_444996.1 CDS groS NC_007677.1 1105761 1106183 R identified by match to protein family HMM PF00166; chaperonin, 10 kDa complement(1105761..1106183) Salinibacter ruber DSM 13855 3850912 YP_444997.1 CDS SRU_0863 NC_007677.1 1106335 1106427 R hypothetical protein complement(1106335..1106427) Salinibacter ruber DSM 13855 3851403 YP_444998.1 CDS pgl NC_007677.1 1106637 1107467 R identified by match to protein family HMM PF01182; match to protein family HMM TIGR01198; 6-phosphogluconolactonase complement(1106637..1107467) Salinibacter ruber DSM 13855 3850514 YP_444999.1 CDS SRU_0865 NC_007677.1 1107483 1108451 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1107483..1108451) Salinibacter ruber DSM 13855 3853060 YP_445000.1 CDS SRU_0866 NC_007677.1 1108670 1109416 R identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase family complement(1108670..1109416) Salinibacter ruber DSM 13855 3852442 YP_445001.1 CDS SRU_0867 NC_007677.1 1109524 1109736 R hypothetical protein complement(1109524..1109736) Salinibacter ruber DSM 13855 3850970 YP_445002.1 CDS SRU_0868 NC_007677.1 1109764 1110708 R identified by match to protein family HMM PF01497; periplasmic binding protein complement(1109764..1110708) Salinibacter ruber DSM 13855 3852763 YP_445003.1 CDS SRU_0869 NC_007677.1 1110730 1111272 R hypothetical protein complement(1110730..1111272) Salinibacter ruber DSM 13855 3852220 YP_445004.1 CDS SRU_0870 NC_007677.1 1111328 1112524 R hypothetical protein complement(1111328..1112524) Salinibacter ruber DSM 13855 3851958 YP_445005.1 CDS SRU_0871 NC_007677.1 1112537 1114513 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; iron compound TonB-dependent receptor complement(1112537..1114513) Salinibacter ruber DSM 13855 3852133 YP_445006.1 CDS SRU_0872 NC_007677.1 1115180 1115575 R hypothetical protein complement(1115180..1115575) Salinibacter ruber DSM 13855 3851545 YP_445007.1 CDS SRU_0873 NC_007677.1 1115735 1117741 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory transduction histidine kinase 1115735..1117741 Salinibacter ruber DSM 13855 3852124 YP_445008.1 CDS SRU_0874 NC_007677.1 1117769 1118617 R identified by match to protein family HMM PF00561; haloalkane dehalogenase complement(1117769..1118617) Salinibacter ruber DSM 13855 3851362 YP_445009.1 CDS SRU_0875 NC_007677.1 1118648 1119607 R DeoR family transcriptional regulator complement(1118648..1119607) Salinibacter ruber DSM 13855 3852154 YP_445010.1 CDS SRU_0876 NC_007677.1 1119685 1120326 R hypothetical protein complement(1119685..1120326) Salinibacter ruber DSM 13855 3851425 YP_445011.1 CDS SRU_0877 NC_007677.1 1120608 1121309 R identified by match to protein family HMM TIGR02453; hypothetical protein complement(1120608..1121309) Salinibacter ruber DSM 13855 3851319 YP_445012.1 CDS SRU_0878 NC_007677.1 1121475 1122161 R hypothetical protein complement(1121475..1122161) Salinibacter ruber DSM 13855 3852744 YP_445013.1 CDS SRU_0879 NC_007677.1 1122233 1123369 R identified by match to protein family HMM PF03480; match to protein family HMM TIGR01409; extracellular solute-binding protein complement(1122233..1123369) Salinibacter ruber DSM 13855 3851573 YP_445014.1 CDS SRU_0880 NC_007677.1 1123566 1124291 R identified by match to protein family HMM PF00106; match to protein family HMM PF07993; NAD-binding domain-containing protein complement(1123566..1124291) Salinibacter ruber DSM 13855 3852101 YP_445015.1 CDS SRU_0881 NC_007677.1 1124501 1125295 R hypothetical protein complement(1124501..1125295) Salinibacter ruber DSM 13855 3852196 YP_445016.1 CDS SRU_0882 NC_007677.1 1125454 1126197 D identified by match to protein family HMM PF00588; rRNA methylase 1125454..1126197 Salinibacter ruber DSM 13855 3852142 YP_445017.1 CDS SRU_0883 NC_007677.1 1126231 1128612 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(1126231..1128612) Salinibacter ruber DSM 13855 3852250 YP_445018.1 CDS sun NC_007677.1 1129132 1130415 D identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; ribosomal RNA small subunit methyltransferase B 1129132..1130415 Salinibacter ruber DSM 13855 3852136 YP_445019.1 CDS SRU_0885 NC_007677.1 1130601 1131653 D hypothetical protein 1130601..1131653 Salinibacter ruber DSM 13855 3850775 YP_445020.1 CDS SRU_0886 NC_007677.1 1131729 1132292 R hypothetical protein complement(1131729..1132292) Salinibacter ruber DSM 13855 3851404 YP_445021.1 CDS SRU_0887 NC_007677.1 1134702 1135658 D identified by match to protein family HMM PF00589; match to protein family HMM TIGR02249; integron integrase subfamily protein 1134702..1135658 Salinibacter ruber DSM 13855 3850544 YP_445022.1 CDS ligA NC_007677.1 1135781 1137853 R identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; NAD-dependent DNA ligase complement(1135781..1137853) Salinibacter ruber DSM 13855 3853127 YP_445023.1 CDS SRU_0889 NC_007677.1 1138111 1138953 D hypothetical protein 1138111..1138953 Salinibacter ruber DSM 13855 3850923 YP_445024.1 CDS smc NC_007677.1 1139241 1142801 D identified by match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC 1139241..1142801 Salinibacter ruber DSM 13855 3852788 YP_445025.1 CDS SRU_0891 NC_007677.1 1142856 1143971 D identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 1142856..1143971 Salinibacter ruber DSM 13855 3851683 YP_445026.1 CDS SRU_0892 NC_007677.1 1144102 1145556 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(1144102..1145556) Salinibacter ruber DSM 13855 3851123 YP_445027.1 CDS SRU_0893 NC_007677.1 1146515 1149280 D hypothetical protein 1146515..1149280 Salinibacter ruber DSM 13855 3851138 YP_445028.1 CDS SRU_0894 NC_007677.1 1149314 1150462 R identified by match to protein family HMM PF00144; beta-lactamase complement(1149314..1150462) Salinibacter ruber DSM 13855 3851309 YP_445029.1 CDS ggt NC_007677.1 1150913 1152739 D identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 1150913..1152739 Salinibacter ruber DSM 13855 3852331 YP_445030.1 CDS SRU_0896 NC_007677.1 1152965 1153267 D hypothetical protein 1152965..1153267 Salinibacter ruber DSM 13855 3850829 YP_445031.1 CDS purF NC_007677.1 1153321 1155021 R identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase complement(1153321..1155021) Salinibacter ruber DSM 13855 3850580 YP_445032.1 CDS SRU_0898 NC_007677.1 1155106 1155402 R hypothetical protein complement(1155106..1155402) Salinibacter ruber DSM 13855 3852947 YP_445033.1 CDS SRU_0899 NC_007677.1 1155601 1157124 R identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter complement(1155601..1157124) Salinibacter ruber DSM 13855 3851776 YP_445034.1 CDS SRU_0900 NC_007677.1 1157131 1158633 R identified by match to protein family HMM PF00209; sodium- and chloride-dependent transporter complement(1157131..1158633) Salinibacter ruber DSM 13855 3852999 YP_445035.1 CDS SRU_0901 NC_007677.1 1158703 1158951 R hypothetical protein complement(1158703..1158951) Salinibacter ruber DSM 13855 3851131 YP_445036.1 CDS ald NC_007677.1 1158965 1160188 R identified by match to protein family HMM PF01262; match to protein family HMM PF05222; alanine dehydrogenase complement(1158965..1160188) Salinibacter ruber DSM 13855 3851937 YP_445037.1 CDS SRU_0903 NC_007677.1 1160448 1161368 D identified by match to protein family HMM PF03446; match to protein family HMM PF03807; NADP oxidoreductase coenzyme F420-dependent superfamily protein 1160448..1161368 Salinibacter ruber DSM 13855 3850498 YP_445038.1 CDS SRU_0904 NC_007677.1 1161509 1162177 D hypothetical protein 1161509..1162177 Salinibacter ruber DSM 13855 3850859 YP_445039.1 CDS lysS NC_007677.1 1162313 1163857 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase 1162313..1163857 Salinibacter ruber DSM 13855 3852691 YP_445040.1 CDS SRU_0906 NC_007677.1 1164139 1165110 R identified by match to protein family HMM PF00691; match to protein family HMM PF00801; hypothetical protein complement(1164139..1165110) Salinibacter ruber DSM 13855 3850421 YP_445041.1 CDS rpsT NC_007677.1 1165441 1165761 R identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 complement(1165441..1165761) Salinibacter ruber DSM 13855 3853066 YP_445042.1 CDS SRU_0908 NC_007677.1 1166105 1166887 D identified by match to protein family HMM PF01551; M24/M37 family peptidase 1166105..1166887 Salinibacter ruber DSM 13855 3852834 YP_445043.1 CDS SRU_0909 NC_007677.1 1166938 1167438 D identified by match to protein family HMM PF04519; hypothetical protein 1166938..1167438 Salinibacter ruber DSM 13855 3852199 YP_445044.1 CDS SRU_0910 NC_007677.1 1168080 1168325 D hypothetical protein 1168080..1168325 Salinibacter ruber DSM 13855 3851053 YP_445045.1 CDS SRU_0911 NC_007677.1 1168377 1169615 D identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0 subunit A 1168377..1169615 Salinibacter ruber DSM 13855 3851678 YP_445046.1 CDS atpE NC_007677.1 1169715 1169945 D identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 1169715..1169945 Salinibacter ruber DSM 13855 3851224 YP_445047.1 CDS atpF NC_007677.1 1170146 1170760 D identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B 1170146..1170760 Salinibacter ruber DSM 13855 3852372 YP_445048.1 CDS atpH NC_007677.1 1170818 1171390 D identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 1170818..1171390 Salinibacter ruber DSM 13855 3852770 YP_445049.1 CDS atpA NC_007677.1 1171450 1173105 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 1171450..1173105 Salinibacter ruber DSM 13855 3851793 YP_445050.1 CDS atpG NC_007677.1 1173258 1174184 D identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 1173258..1174184 Salinibacter ruber DSM 13855 3852454 YP_445051.1 CDS SRU_0918 NC_007677.1 1174474 1175940 D identified by match to protein family HMM PF01370; nucleoside-diphosphate-sugar epimerase 1174474..1175940 Salinibacter ruber DSM 13855 3852619 YP_445052.1 CDS SRU_0919 NC_007677.1 1176005 1177270 D deoxyribonuclease 1176005..1177270 Salinibacter ruber DSM 13855 3850862 YP_445053.1 CDS SRU_0920 NC_007677.1 1177308 1178528 R identified by match to protein family HMM PF01244; dipeptidase complement(1177308..1178528) Salinibacter ruber DSM 13855 3852544 YP_445054.1 CDS fecB NC_007677.1 1178594 1179400 R identified by match to protein family HMM PF01497; Fe3+-siderophores ABC transporter complement(1178594..1179400) Salinibacter ruber DSM 13855 3850524 YP_445055.1 CDS SRU_0922 NC_007677.1 1179536 1180606 D identified by match to protein family HMM PF01717; hypothetical protein 1179536..1180606 Salinibacter ruber DSM 13855 3851746 YP_445056.1 CDS mpl NC_007677.1 1180608 1182083 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(1180608..1182083) Salinibacter ruber DSM 13855 3852170 YP_445057.1 CDS SRU_0924 NC_007677.1 1182115 1183302 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; hypothetical protein complement(1182115..1183302) Salinibacter ruber DSM 13855 3852389 YP_445058.1 CDS SRU_0925 NC_007677.1 1183618 1187544 R identified by match to protein family HMM PF00873; multidrug resistance protein complement(1183618..1187544) Salinibacter ruber DSM 13855 3851523 YP_445059.1 CDS SRU_0926 NC_007677.1 1187630 1188832 R identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(1187630..1188832) Salinibacter ruber DSM 13855 3851269 YP_445060.1 CDS SRU_0927 NC_007677.1 1188889 1190631 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(1188889..1190631) Salinibacter ruber DSM 13855 3850770 YP_445061.1 CDS SRU_0928 NC_007677.1 1190609 1191310 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1190609..1191310) Salinibacter ruber DSM 13855 3852146 YP_445062.1 CDS SRU_0929 NC_007677.1 1191565 1193064 R identified by match to protein family HMM PF03109; ABC1 family protein complement(1191565..1193064) Salinibacter ruber DSM 13855 3850762 YP_445063.1 CDS SRU_0930 NC_007677.1 1193064 1193654 R hypothetical protein complement(1193064..1193654) Salinibacter ruber DSM 13855 3851858 YP_445064.1 CDS SRU_0931 NC_007677.1 1193882 1195498 R identified by match to protein family HMM PF00581; thiosulfate sulfurtransferase complement(1193882..1195498) Salinibacter ruber DSM 13855 3851391 YP_445065.1 CDS SRU_0932 NC_007677.1 1195676 1196107 R identified by match to protein family HMM PF02629; CoA-binding domain-containing protein complement(1195676..1196107) Salinibacter ruber DSM 13855 3851586 YP_445066.1 CDS leuS NC_007677.1 1196295 1198886 D identified by match to protein family HMM PF00133; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 1196295..1198886 Salinibacter ruber DSM 13855 3850817 YP_445067.1 CDS SRU_0934 NC_007677.1 1199008 1199766 D identified by match to protein family HMM PF02585; GlcNAc-PI de-N-acetylase family 1199008..1199766 Salinibacter ruber DSM 13855 3852961 YP_445068.1 CDS efp NC_007677.1 1199939 1200517 D identified by match to protein family HMM PF01132; match to protein family HMM TIGR00038; translation elongation factor P 1199939..1200517 Salinibacter ruber DSM 13855 3850651 YP_445069.1 CDS accB NC_007677.1 1200563 1201192 D identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1200563..1201192 Salinibacter ruber DSM 13855 3850424 YP_445070.1 CDS accC NC_007677.1 1201349 1202824 D identified by match to protein family HMM PF00289; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 1201349..1202824 Salinibacter ruber DSM 13855 3850744 YP_445071.1 CDS SRU_0938 NC_007677.1 1202963 1204177 D identified by match to protein family HMM PF00155; match to protein family HMM PF01212; aspartate aminotransferase 1202963..1204177 Salinibacter ruber DSM 13855 3851655 YP_445072.1 CDS SRU_0939 NC_007677.1 1204241 1205488 D identified by match to protein family HMM PF02163; peptidase, M50 family protein 1204241..1205488 Salinibacter ruber DSM 13855 3850670 YP_445073.1 CDS SRU_0940 NC_007677.1 1205575 1206108 D hypothetical protein 1205575..1206108 Salinibacter ruber DSM 13855 3852478 YP_445074.1 CDS SRU_0941 NC_007677.1 1206276 1207721 D hypothetical protein 1206276..1207721 Salinibacter ruber DSM 13855 3852043 YP_445075.1 CDS SRU_0942 NC_007677.1 1207859 1208836 D hypothetical protein 1207859..1208836 Salinibacter ruber DSM 13855 3851017 YP_445076.1 CDS SRU_0943 NC_007677.1 1208870 1209667 R hypothetical protein complement(1208870..1209667) Salinibacter ruber DSM 13855 3852439 YP_445077.1 CDS SRU_0944 NC_007677.1 1209758 1212277 R identified by match to protein family HMM PF00326; acylaminoacyl-peptidase complement(1209758..1212277) Salinibacter ruber DSM 13855 3851901 YP_445078.1 CDS SRU_0945 NC_007677.1 1212414 1213208 R hypothetical protein complement(1212414..1213208) Salinibacter ruber DSM 13855 3852010 YP_445079.1 CDS SRU_0946 NC_007677.1 1213214 1213990 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 1213214..1213990 Salinibacter ruber DSM 13855 3850854 YP_445080.1 CDS SRU_0947 NC_007677.1 1214066 1214869 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 1214066..1214869 Salinibacter ruber DSM 13855 3850571 YP_445081.1 CDS SRU_0948 NC_007677.1 1215123 1216127 R alpha/beta hydrolase complement(1215123..1216127) Salinibacter ruber DSM 13855 3852471 YP_445082.1 CDS SRU_0950 NC_007677.1 1216622 1217371 R identified by match to protein family HMM PF00929; exonuclease complement(1216622..1217371) Salinibacter ruber DSM 13855 3850801 YP_445083.1 CDS SRU_0951 NC_007677.1 1217298 1218980 D identified by match to protein family HMM PF00144; beta-lactamase 1217298..1218980 Salinibacter ruber DSM 13855 3851029 YP_445084.1 CDS SRU_0952 NC_007677.1 1219067 1219537 R hypothetical protein complement(1219067..1219537) Salinibacter ruber DSM 13855 3851975 YP_445085.1 CDS SRU_0953 NC_007677.1 1219562 1220401 R identified by match to protein family HMM PF01656; ParA family protein complement(1219562..1220401) Salinibacter ruber DSM 13855 3851789 YP_445086.1 CDS SRU_0954 NC_007677.1 1220450 1221769 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(1220450..1221769) Salinibacter ruber DSM 13855 3852347 YP_445087.1 CDS folK NC_007677.1 1221778 1222332 D identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1221778..1222332 Salinibacter ruber DSM 13855 3851233 YP_445088.1 CDS dck NC_007677.1 1222286 1223071 D identified by match to protein family HMM PF01712; deoxyguanosine kinase/deoxyadenosine kinase subunit 1222286..1223071 Salinibacter ruber DSM 13855 3851855 YP_445089.1 CDS SRU_0957 NC_007677.1 1223117 1223386 D hypothetical protein 1223117..1223386 Salinibacter ruber DSM 13855 3851116 YP_445090.1 CDS SRU_0958 NC_007677.1 1223400 1224302 R identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein complement(1223400..1224302) Salinibacter ruber DSM 13855 3850383 YP_445091.1 CDS carA NC_007677.1 1224443 1225603 D identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; carbamoyl-phosphate synthase small subunit 1224443..1225603 Salinibacter ruber DSM 13855 3852760 YP_445092.1 CDS carB NC_007677.1 1225724 1228552 D identified by match to protein family HMM PF00289; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 1225724..1228552 Salinibacter ruber DSM 13855 3850839 YP_445093.1 CDS SRU_0961 NC_007677.1 1229806 1230489 D identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164; phosphatidylserine decarboxylase 1229806..1230489 Salinibacter ruber DSM 13855 3853049 YP_445094.1 CDS SRU_0962 NC_007677.1 1230650 1231381 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; phosphatidylserine synthase 1230650..1231381 Salinibacter ruber DSM 13855 3851113 YP_445095.1 CDS purS NC_007677.1 1231437 1231715 D identified by match to protein family HMM PF02700; match to protein family HMM TIGR00302; phosphoribosylformylglycinamidine (FGAM) synthase 1231437..1231715 Salinibacter ruber DSM 13855 3851553 YP_445096.1 CDS SRU_0964 NC_007677.1 1231790 1232137 D identified by match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS 1231790..1232137 Salinibacter ruber DSM 13855 3850991 YP_445097.1 CDS SRU_0965 NC_007677.1 1232154 1233299 R hypothetical protein complement(1232154..1233299) Salinibacter ruber DSM 13855 3850753 YP_445098.1 CDS SRU_0966 NC_007677.1 1233640 1233849 D identified by match to protein family HMM PF00313; cold-shock DNA-binding domain-containing protein 1233640..1233849 Salinibacter ruber DSM 13855 3852144 YP_445099.1 CDS SRU_0967 NC_007677.1 1234365 1234577 R hypothetical protein complement(1234365..1234577) Salinibacter ruber DSM 13855 3853102 YP_445100.1 CDS SRU_0968 NC_007677.1 1234767 1234967 D hypothetical protein 1234767..1234967 Salinibacter ruber DSM 13855 3851245 YP_445101.1 CDS dapD NC_007677.1 1235119 1235961 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1235119..1235961) Salinibacter ruber DSM 13855 3852528 YP_445102.1 CDS dnaG NC_007677.1 1236378 1238345 D identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase 1236378..1238345 Salinibacter ruber DSM 13855 3852247 YP_445103.1 CDS SRU_0971 NC_007677.1 1238379 1240220 R hypothetical protein complement(1238379..1240220) Salinibacter ruber DSM 13855 3851555 YP_445104.1 CDS SRU_0972 NC_007677.1 1240266 1240964 R identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase complement(1240266..1240964) Salinibacter ruber DSM 13855 3852526 YP_445105.1 CDS SRU_0973 NC_007677.1 1241066 1241584 R hypothetical protein complement(1241066..1241584) Salinibacter ruber DSM 13855 3851025 YP_445106.1 CDS SRU_0974 NC_007677.1 1241850 1242311 R identified by match to protein family HMM PF04434; SWIM zinc finger domain-containing protein complement(1241850..1242311) Salinibacter ruber DSM 13855 3853047 YP_445107.1 CDS guaA NC_007677.1 1242334 1243071 R identified by match to protein family HMM PF00117; match to protein family HMM PF07685; GMP synthase complement(1242334..1243071) Salinibacter ruber DSM 13855 3850365 YP_445108.1 CDS SRU_0976 NC_007677.1 1243338 1244819 D hypothetical protein 1243338..1244819 Salinibacter ruber DSM 13855 3851992 YP_445109.1 CDS SRU_0977 NC_007677.1 1244825 1246498 D hypothetical protein 1244825..1246498 Salinibacter ruber DSM 13855 3850942 YP_445110.1 CDS SRU_0978 NC_007677.1 1246611 1246934 D hypothetical protein 1246611..1246934 Salinibacter ruber DSM 13855 3850486 YP_445111.1 CDS dnaE NC_007677.1 1247212 1250712 R identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha complement(1247212..1250712) Salinibacter ruber DSM 13855 3852400 YP_445112.1 CDS SRU_0980 NC_007677.1 1250984 1252126 R xylose isomerase complement(1250984..1252126) Salinibacter ruber DSM 13855 3850533 YP_445113.1 CDS SRU_0981 NC_007677.1 1252129 1253745 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase complement(1252129..1253745) Salinibacter ruber DSM 13855 3851217 YP_445114.1 CDS SRU_0982 NC_007677.1 1253742 1255340 R identified by match to protein family HMM PF05684; hypothetical protein complement(1253742..1255340) Salinibacter ruber DSM 13855 3850800 YP_445115.1 CDS SRU_0983 NC_007677.1 1255447 1257435 D hypothetical protein 1255447..1257435 Salinibacter ruber DSM 13855 3852990 YP_445116.1 CDS lgt NC_007677.1 1257439 1258266 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(1257439..1258266) Salinibacter ruber DSM 13855 3850523 YP_445117.1 CDS SRU_0985 NC_007677.1 1258424 1258786 D citrate synthase family protein 1258424..1258786 Salinibacter ruber DSM 13855 3852933 YP_445118.1 CDS argS NC_007677.1 1258846 1260534 R identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginyl-tRNA synthetase complement(1258846..1260534) Salinibacter ruber DSM 13855 3851895 YP_445119.1 CDS SRU_0987 NC_007677.1 1261234 1261554 D identified by match to protein family HMM PF07883; pectin degradation protein 1261234..1261554 Salinibacter ruber DSM 13855 3851383 YP_445120.1 CDS SRU_0988 NC_007677.1 1261639 1263009 D identified by match to protein family HMM PF00004; recombination factor protein RarA 1261639..1263009 Salinibacter ruber DSM 13855 3852344 YP_445121.1 CDS SRU_0989 NC_007677.1 1263433 1264419 D identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1263433..1264419 Salinibacter ruber DSM 13855 3852305 YP_445122.1 CDS SRU_0990 NC_007677.1 1264603 1265166 D identified by match to protein family HMM PF04290; TRAP transporter DctQ-like membrane protein 1264603..1265166 Salinibacter ruber DSM 13855 3852741 YP_445123.1 CDS SRU_0991 NC_007677.1 1265353 1266699 D identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786; TRAP transporter DctM family protein 1265353..1266699 Salinibacter ruber DSM 13855 3851851 YP_445124.1 CDS SRU_0992 NC_007677.1 1266718 1268415 R hypothetical protein complement(1266718..1268415) Salinibacter ruber DSM 13855 3851232 YP_445125.1 CDS SRU_0993 NC_007677.1 1269068 1269910 D hypothetical protein 1269068..1269910 Salinibacter ruber DSM 13855 3851819 YP_445126.1 CDS SRU_0995 NC_007677.1 1270179 1270823 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 1270179..1270823 Salinibacter ruber DSM 13855 3851541 YP_445127.1 CDS SRU_0994 NC_007677.1 1270820 1271737 R identified by match to protein family HMM PF00685; deacetylase complement(1270820..1271737) Salinibacter ruber DSM 13855 3851953 YP_445128.1 CDS SRU_0996 NC_007677.1 1271668 1272561 R hypothetical protein complement(1271668..1272561) Salinibacter ruber DSM 13855 3850999 YP_445129.1 CDS SRU_0997 NC_007677.1 1272622 1275306 D hypothetical protein 1272622..1275306 Salinibacter ruber DSM 13855 3850910 YP_445130.1 CDS SRU_0998 NC_007677.1 1275465 1276667 D hypothetical protein 1275465..1276667 Salinibacter ruber DSM 13855 3852012 YP_445131.1 CDS SRU_0999 NC_007677.1 1276907 1278625 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1276907..1278625 Salinibacter ruber DSM 13855 3850435 YP_445132.1 CDS SRU_1000 NC_007677.1 1278671 1279510 D identified by match to protein family HMM PF00685; sulfotransferase protein 1278671..1279510 Salinibacter ruber DSM 13855 3852191 YP_445133.1 CDS rfbQ NC_007677.1 1279576 1280520 R identified by match to protein family HMM PF00535; rhamnosyl transferase complement(1279576..1280520) Salinibacter ruber DSM 13855 3853018 YP_445134.1 CDS SRU_1003 NC_007677.1 1280800 1281858 D identified by match to protein family HMM PF00534; glycoside hydrolase 1280800..1281858 Salinibacter ruber DSM 13855 3852236 YP_445135.1 CDS SRU_1002 NC_007677.1 1281855 1282817 R identified by match to protein family HMM PF00685; sulfotransferase domain-containing protein complement(1281855..1282817) Salinibacter ruber DSM 13855 3850837 YP_445136.1 CDS SRU_1004 NC_007677.1 1282858 1283850 R sulfotransferase protein complement(1282858..1283850) Salinibacter ruber DSM 13855 3850879 YP_445137.1 CDS SRU_1005 NC_007677.1 1284744 1285817 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH domain-containing protein 1284744..1285817 Salinibacter ruber DSM 13855 3850477 YP_445138.1 CDS pdxA NC_007677.1 1285887 1287095 D identified by match to protein family HMM PF04166; match to protein family HMM TIGR00557; 4-hydroxythreonine-4-phosphate dehydrogenase 1285887..1287095 Salinibacter ruber DSM 13855 3850448 YP_445139.1 CDS ftsE NC_007677.1 1287126 1287929 D identified by match to protein family HMM PF00005; cell-division ATP-binding protein 1287126..1287929 Salinibacter ruber DSM 13855 3853021 YP_445140.1 CDS SRU_1008 NC_007677.1 1288224 1289063 D hypothetical protein 1288224..1289063 Salinibacter ruber DSM 13855 3852249 YP_445141.1 CDS SRU_1009 NC_007677.1 1289126 1289737 R hypothetical protein complement(1289126..1289737) Salinibacter ruber DSM 13855 3851997 YP_445142.1 CDS SRU_1010 NC_007677.1 1290315 1290638 D hypothetical protein 1290315..1290638 Salinibacter ruber DSM 13855 3850623 YP_445143.1 CDS SRU_1011 NC_007677.1 1290888 1292258 D identified by match to protein family HMM PF00082; intracellular alkaline serine proteinase 1290888..1292258 Salinibacter ruber DSM 13855 3852210 YP_445144.1 CDS SRU_1012 NC_007677.1 1292599 1293117 R hypothetical protein complement(1292599..1293117) Salinibacter ruber DSM 13855 3850516 YP_445145.1 CDS hemB NC_007677.1 1293212 1294234 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1293212..1294234) Salinibacter ruber DSM 13855 3853098 YP_445146.1 CDS cysS NC_007677.1 1294327 1296036 R identified by match to protein family HMM PF01406; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase complement(1294327..1296036) Salinibacter ruber DSM 13855 3852127 YP_445147.1 CDS SRU_1015 NC_007677.1 1296037 1296393 R ArsR family transcriptional regulator complement(1296037..1296393) Salinibacter ruber DSM 13855 3851631 YP_445148.1 CDS SRU_1016 NC_007677.1 1296386 1297150 R hypothetical protein complement(1296386..1297150) Salinibacter ruber DSM 13855 3850631 YP_445149.1 CDS SRU_1017 NC_007677.1 1297220 1297591 R identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein complement(1297220..1297591) Salinibacter ruber DSM 13855 3852867 YP_445150.1 CDS SRU_1018 NC_007677.1 1297627 1298010 D identified by match to protein family HMM PF01502; phosphoribosyl-AMP cyclohydrolase domain-containing protein 1297627..1298010 Salinibacter ruber DSM 13855 3850913 YP_445151.1 CDS SRU_1019 NC_007677.1 1298013 1299449 R identified by match to protein family HMM PF00474; proline permease complement(1298013..1299449) Salinibacter ruber DSM 13855 3851301 YP_445152.1 CDS SRU_1020 NC_007677.1 1299662 1300132 R RNA methylase family protein complement(1299662..1300132) Salinibacter ruber DSM 13855 3850551 YP_445153.1 CDS SRU_1021 NC_007677.1 1300333 1301694 R identified by match to protein family HMM PF00324; amino acid permease family protein complement(1300333..1301694) Salinibacter ruber DSM 13855 3852103 YP_445154.1 CDS SRU_1022 NC_007677.1 1301960 1302454 D identified by match to protein family HMM PF03073; mitochondrial benzodiazepine receptor/sensory transduction protein 1301960..1302454 Salinibacter ruber DSM 13855 3850723 YP_445155.1 CDS SRU_1023 NC_007677.1 1302475 1304004 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; NAD-dependent epimerase/dehydratase family protein complement(1302475..1304004) Salinibacter ruber DSM 13855 3850828 YP_445156.1 CDS SRU_1024 NC_007677.1 1304529 1305173 D hypothetical protein 1304529..1305173 Salinibacter ruber DSM 13855 3852540 YP_445157.1 CDS SRU_1025 NC_007677.1 1305243 1306172 D hypothetical protein 1305243..1306172 Salinibacter ruber DSM 13855 3852377 YP_445158.1 CDS SRU_1026 NC_007677.1 1306357 1307532 D identified by match to protein family HMM PF00571; match to protein family HMM PF02163; peptidase, M50 family protein 1306357..1307532 Salinibacter ruber DSM 13855 3852668 YP_445159.1 CDS pykA NC_007677.1 1307678 1309108 D identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 1307678..1309108 Salinibacter ruber DSM 13855 3851070 YP_445160.1 CDS SRU_1028 NC_007677.1 1309234 1312206 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1309234..1312206 Salinibacter ruber DSM 13855 3852977 YP_445161.1 CDS ftsH NC_007677.1 1312243 1314303 D identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protein FtsH 1312243..1314303 Salinibacter ruber DSM 13855 3851938 YP_445162.2 CDS rpsL NC_007677.1 1314697 1315071 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1314697..1315071 Salinibacter ruber DSM 13855 3851097 YP_445163.1 CDS rpsG NC_007677.1 1315119 1315592 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1315119..1315592 Salinibacter ruber DSM 13855 3851286 YP_445164.1 CDS fusA NC_007677.1 1315666 1317786 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 1315666..1317786 Salinibacter ruber DSM 13855 3851010 YP_445165.1 CDS tuf NC_007677.1 1317874 1319064 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1317874..1319064 Salinibacter ruber DSM 13855 3853034 YP_445166.1 CDS rpsJ NC_007677.1 1319147 1319458 D identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 1319147..1319458 Salinibacter ruber DSM 13855 3850742 YP_445167.1 CDS rplC NC_007677.1 1319991 1320617 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1319991..1320617 Salinibacter ruber DSM 13855 3852905 YP_445168.1 CDS rplD NC_007677.1 1320691 1321338 D identified by match to protein family HMM PF00573; 50S ribosomal protein L4/L1 family protein 1320691..1321338 Salinibacter ruber DSM 13855 3852960 YP_445169.1 CDS rplW NC_007677.1 1321395 1321694 D identified by match to protein family HMM PF00276; 50S ribosomal protein L23 1321395..1321694 Salinibacter ruber DSM 13855 3850893 YP_445170.1 CDS rplB NC_007677.1 1321747 1322598 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1321747..1322598 Salinibacter ruber DSM 13855 3851579 YP_445171.1 CDS rpsS NC_007677.1 1322674 1322967 D identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 1322674..1322967 Salinibacter ruber DSM 13855 3852090 YP_445172.1 CDS rplV NC_007677.1 1323056 1323421 D identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 1323056..1323421 Salinibacter ruber DSM 13855 3851829 YP_445173.1 CDS rpsC NC_007677.1 1323483 1324193 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1323483..1324193 Salinibacter ruber DSM 13855 3850591 YP_445174.1 CDS rplP NC_007677.1 1324254 1324691 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1324254..1324691 Salinibacter ruber DSM 13855 3851336 YP_445175.1 CDS rpmC NC_007677.1 1324700 1324948 D identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 1324700..1324948 Salinibacter ruber DSM 13855 3852831 YP_445176.1 CDS SRU_1044 NC_007677.1 1325009 1325317 D identified by match to protein family HMM PF00366; 30S ribosomal protein S17 1325009..1325317 Salinibacter ruber DSM 13855 3852453 YP_445177.1 CDS rplN NC_007677.1 1325402 1325770 D identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 1325402..1325770 Salinibacter ruber DSM 13855 3852939 YP_445178.1 CDS rplX NC_007677.1 1325860 1326195 D identified by match to protein family HMM TIGR01079; 50S ribosomal protein L24 1325860..1326195 Salinibacter ruber DSM 13855 3850536 YP_445179.1 CDS rplE NC_007677.1 1326329 1326904 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1326329..1326904 Salinibacter ruber DSM 13855 3851940 YP_445180.1 CDS rpS NC_007677.1 1326979 1327248 D identified by match to protein family HMM PF00253; 30S ribosomal protein S14 1326979..1327248 Salinibacter ruber DSM 13855 3853115 YP_445181.1 CDS rpsH NC_007677.1 1327342 1327743 D identified by match to protein family HMM PF00410; 30S ribosomal protein S8 1327342..1327743 Salinibacter ruber DSM 13855 3852157 YP_445182.1 CDS rplF NC_007677.1 1327811 1328365 D identified by match to protein family HMM PF00347; 50S ribosomal protein L6 1327811..1328365 Salinibacter ruber DSM 13855 3850398 YP_445183.1 CDS rplR NC_007677.1 1328441 1328800 D identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 1328441..1328800 Salinibacter ruber DSM 13855 3852614 YP_445184.1 CDS rpsE NC_007677.1 1328851 1329378 D identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 1328851..1329378 Salinibacter ruber DSM 13855 3851852 YP_445185.1 CDS rplO NC_007677.1 1329478 1329978 D identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 1329478..1329978 Salinibacter ruber DSM 13855 3850482 YP_445186.1 CDS secY NC_007677.1 1330035 1331366 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1330035..1331366 Salinibacter ruber DSM 13855 3850875 YP_445187.1 CDS map NC_007677.1 1331439 1332263 D identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 1331439..1332263 Salinibacter ruber DSM 13855 3852736 YP_445188.1 CDS infA NC_007677.1 1332263 1332484 D identified by match to protein family HMM PF00575; match to protein family HMM TIGR00008; translation initiation factor IF-1 1332263..1332484 Salinibacter ruber DSM 13855 3851347 YP_445189.1 CDS rpsM NC_007677.1 1332573 1332956 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1332573..1332956 Salinibacter ruber DSM 13855 3851277 YP_445190.1 CDS SRU_1058 NC_007677.1 1332972 1333448 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1332972..1333448 Salinibacter ruber DSM 13855 3850429 YP_445191.1 CDS rpsD NC_007677.1 1333558 1334160 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1333558..1334160 Salinibacter ruber DSM 13855 3851908 YP_445192.1 CDS rpoA NC_007677.1 1334278 1335243 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1334278..1335243 Salinibacter ruber DSM 13855 3851770 YP_445193.1 CDS rplQ NC_007677.1 1335330 1335923 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1335330..1335923 Salinibacter ruber DSM 13855 3850559 YP_445194.1 CDS spoT NC_007677.1 1336119 1338359 D identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; RelA/SpoT family protein 1336119..1338359 Salinibacter ruber DSM 13855 3850676 YP_445195.1 CDS hup NC_007677.1 1338399 1338779 D identified by match to protein family HMM PF00216; DNA-binding protein HU 1338399..1338779 Salinibacter ruber DSM 13855 3852839 YP_445196.1 CDS SRU_1064 NC_007677.1 1338851 1339282 D identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein 1338851..1339282 Salinibacter ruber DSM 13855 3852493 YP_445197.1 CDS SRU_1065 NC_007677.1 1339301 1340341 R hypothetical protein complement(1339301..1340341) Salinibacter ruber DSM 13855 3852416 YP_445198.1 CDS SRU_1066 NC_007677.1 1340367 1340906 R identified by match to protein family HMM PF01230; HIT domain-containing protein complement(1340367..1340906) Salinibacter ruber DSM 13855 3852186 YP_445199.1 CDS SRU_1067 NC_007677.1 1341070 1341903 D identified by similarity to GB:AAM24591.1; match to protein family HMM PF02811; hypothetical protein 1341070..1341903 Salinibacter ruber DSM 13855 3853101 YP_445200.1 CDS ribE NC_007677.1 1341951 1342421 D identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase 1341951..1342421 Salinibacter ruber DSM 13855 3852110 YP_445201.1 CDS SRU_1071 NC_007677.1 1342818 1343969 R hypothetical protein complement(1342818..1343969) Salinibacter ruber DSM 13855 3851904 YP_445202.1 CDS SRU_1072 NC_007677.1 1344014 1344295 R hypothetical protein complement(1344014..1344295) Salinibacter ruber DSM 13855 3851607 YP_445203.1 CDS comF NC_007677.1 1344415 1345134 D competence protein F 1344415..1345134 Salinibacter ruber DSM 13855 3850621 YP_445204.1 CDS msrA NC_007677.1 1345191 1345847 R identified by similarity to SP:Q93P63; match to protein family HMM PF01625; match to protein family HMM TIGR00401; methionine-S-sulfoxide reductase complement(1345191..1345847) Salinibacter ruber DSM 13855 3851279 YP_445205.1 CDS ndk NC_007677.1 1346023 1346451 D identified by match to protein family HMM PF00334; nucleoside diphosphate kinase 1346023..1346451 Salinibacter ruber DSM 13855 3852112 YP_445206.1 CDS SRU_1076 NC_007677.1 1346517 1347767 D identified by match to protein family HMM PF07075; hypothetical protein 1346517..1347767 Salinibacter ruber DSM 13855 3852257 YP_445207.1 CDS SRU_1077 NC_007677.1 1347768 1348124 R hypothetical protein complement(1347768..1348124) Salinibacter ruber DSM 13855 3851816 YP_445208.1 CDS dacB NC_007677.1 1348178 1349611 D identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1348178..1349611 Salinibacter ruber DSM 13855 3850788 YP_445209.1 CDS SRU_1079 NC_007677.1 1349658 1350125 D hypothetical protein 1349658..1350125 Salinibacter ruber DSM 13855 3852185 YP_445210.1 CDS dapA NC_007677.1 1350168 1351076 R identified by match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase complement(1350168..1351076) Salinibacter ruber DSM 13855 3852044 YP_445211.1 CDS dapB NC_007677.1 1351133 1351843 R identified by match to protein family HMM PF01113; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase complement(1351133..1351843) Salinibacter ruber DSM 13855 3850798 YP_445212.1 CDS phrB NC_007677.1 1352336 1353727 D identified by similarity to SP:P05327; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 1352336..1353727 Salinibacter ruber DSM 13855 3851271 YP_445213.1 CDS SRU_1084 NC_007677.1 1355593 1357002 R hypothetical protein complement(1355593..1357002) Salinibacter ruber DSM 13855 3850897 YP_445214.1 CDS SRU_1085 NC_007677.1 1357116 1357778 R hypothetical protein complement(1357116..1357778) Salinibacter ruber DSM 13855 3851956 YP_445215.1 CDS SRU_1086 NC_007677.1 1357855 1359264 D hypothetical protein 1357855..1359264 Salinibacter ruber DSM 13855 3851623 YP_445216.1 CDS SRU_1087 NC_007677.1 1360489 1361364 R identified by match to protein family HMM PF07883; cupin domain-containing protein complement(1360489..1361364) Salinibacter ruber DSM 13855 3851031 YP_445217.1 CDS SRU_1088 NC_007677.1 1361835 1363082 D identified by match to protein family HMM PF00589; phage integrase family protein 1361835..1363082 Salinibacter ruber DSM 13855 3851325 YP_445218.1 CDS SRU_1089 NC_007677.1 1369446 1369820 R hypothetical protein complement(1369446..1369820) Salinibacter ruber DSM 13855 3851168 YP_445219.1 CDS SRU_1090 NC_007677.1 1371436 1371702 R RhoA-specific guanine exchange factor complement(1371436..1371702) Salinibacter ruber DSM 13855 3852930 YP_445220.1 CDS SRU_1091 NC_007677.1 1371754 1372512 R hypothetical protein complement(1371754..1372512) Salinibacter ruber DSM 13855 3852234 YP_445221.1 CDS SRU_1092 NC_007677.1 1372623 1372850 R hypothetical protein complement(1372623..1372850) Salinibacter ruber DSM 13855 3851046 YP_445222.1 CDS SRU_1093 NC_007677.1 1373830 1374165 R hypothetical protein complement(1373830..1374165) Salinibacter ruber DSM 13855 3851708 YP_445223.1 CDS SRU_1094 NC_007677.1 1374242 1374952 R hypothetical protein complement(1374242..1374952) Salinibacter ruber DSM 13855 3852571 YP_445224.1 CDS SRU_1095 NC_007677.1 1375077 1375487 R hypothetical protein complement(1375077..1375487) Salinibacter ruber DSM 13855 3851542 YP_445225.1 CDS SRU_1096 NC_007677.1 1375550 1376125 R identified by match to protein family HMM PF07275; antirestriction protein complement(1375550..1376125) Salinibacter ruber DSM 13855 3851740 YP_445226.1 CDS SRU_1097 NC_007677.1 1380283 1380549 D hypothetical protein 1380283..1380549 Salinibacter ruber DSM 13855 3852486 YP_445227.1 CDS SRU_1098 NC_007677.1 1380683 1382251 D identified by match to protein family HMM PF02384; type i restriction enzyme hindviip m protein 1380683..1382251 Salinibacter ruber DSM 13855 3852365 YP_445228.1 CDS SRU_1099 NC_007677.1 1382294 1383520 D identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 1382294..1383520 Salinibacter ruber DSM 13855 3852708 YP_445229.1 CDS SRU_1100 NC_007677.1 1383558 1384331 D identified by match to protein family HMM PF06271; RDD family protein 1383558..1384331 Salinibacter ruber DSM 13855 3850967 YP_445230.1 CDS SRU_1101 NC_007677.1 1384371 1385399 D hypothetical protein 1384371..1385399 Salinibacter ruber DSM 13855 3851000 YP_445231.1 CDS SRU_1102 NC_007677.1 1385496 1388645 D identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; hypothetical protein 1385496..1388645 Salinibacter ruber DSM 13855 3850425 YP_445232.1 CDS SRU_1103 NC_007677.1 1389684 1390334 D hypothetical protein 1389684..1390334 Salinibacter ruber DSM 13855 3853129 YP_445233.1 CDS SRU_1104 NC_007677.1 1392650 1392748 D hypothetical protein 1392650..1392748 Salinibacter ruber DSM 13855 3852653 YP_445234.1 CDS SRU_1105 NC_007677.1 1392772 1393353 D transposase, degenerate 1392772..1393353 Salinibacter ruber DSM 13855 3851685 YP_445235.1 CDS SRU_1107 NC_007677.1 1394575 1394697 D hypothetical protein 1394575..1394697 Salinibacter ruber DSM 13855 3853136 YP_445236.1 CDS SRU_1108 NC_007677.1 1394840 1395142 R hypothetical protein complement(1394840..1395142) Salinibacter ruber DSM 13855 3851517 YP_445237.1 CDS SRU_1109 NC_007677.1 1397735 1398658 R identified by match to protein family HMM PF00075; ribonuclease H complement(1397735..1398658) Salinibacter ruber DSM 13855 3852425 YP_445238.1 CDS SRU_1110 NC_007677.1 1399001 1401115 R hypothetical protein complement(1399001..1401115) Salinibacter ruber DSM 13855 3850700 YP_445239.1 CDS SRU_1112 NC_007677.1 1402396 1403241 D identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein 1402396..1403241 Salinibacter ruber DSM 13855 3852931 YP_445240.1 CDS SRU_1113 NC_007677.1 1403335 1403937 D hypothetical protein 1403335..1403937 Salinibacter ruber DSM 13855 3851525 YP_445241.1 CDS SRU_1114 NC_007677.1 1404029 1404433 D hypothetical protein 1404029..1404433 Salinibacter ruber DSM 13855 3851333 YP_445242.1 CDS SRU_1115 NC_007677.1 1404491 1405018 R hypothetical protein complement(1404491..1405018) Salinibacter ruber DSM 13855 3850693 YP_445243.1 CDS SRU_1116 NC_007677.1 1405253 1406449 D identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase domain-containing protein 1405253..1406449 Salinibacter ruber DSM 13855 3851811 YP_445244.1 CDS SRU_1117 NC_007677.1 1406761 1407279 D identified by match to protein family HMM PF00210; starvation induced DNA binding protein 1406761..1407279 Salinibacter ruber DSM 13855 3851215 YP_445245.1 CDS topA NC_007677.1 1407572 1410160 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1407572..1410160 Salinibacter ruber DSM 13855 3851511 YP_445246.1 CDS rsgA NC_007677.1 1410236 1411210 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(1410236..1411210) Salinibacter ruber DSM 13855 3850370 YP_445247.1 CDS SRU_1121 NC_007677.1 1411511 1411909 D hypothetical protein 1411511..1411909 Salinibacter ruber DSM 13855 3850972 YP_445248.1 CDS SRU_1120 NC_007677.1 1411607 1411924 R hypothetical protein complement(1411607..1411924) Salinibacter ruber DSM 13855 3850450 YP_445249.1 CDS SRU_1122 NC_007677.1 1412101 1413906 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; FixL-related histidine kinase complement(1412101..1413906) Salinibacter ruber DSM 13855 3852318 YP_445250.1 CDS SRU_1123 NC_007677.1 1414131 1415648 R identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137; cystathionine beta-synthase complement(1414131..1415648) Salinibacter ruber DSM 13855 3851917 YP_445251.1 CDS SRU_1124 NC_007677.1 1415697 1416929 R identified by match to protein family HMM PF03739; hypothetical protein complement(1415697..1416929) Salinibacter ruber DSM 13855 3851390 YP_445252.1 CDS SRU_1125 NC_007677.1 1416928 1418106 D identified by match to protein family HMM PF00549; match to protein family HMM PF02222; match to protein family HMM TIGR01016; succinyl-CoA synthetase beta chain 1416928..1418106 Salinibacter ruber DSM 13855 3850809 YP_445253.1 CDS SRU_1126 NC_007677.1 1418131 1419054 R hypothetical protein complement(1418131..1419054) Salinibacter ruber DSM 13855 3852647 YP_445254.1 CDS SRU_1127 NC_007677.1 1419624 1420019 D IS5 family transposase 1419624..1420019 Salinibacter ruber DSM 13855 3851148 YP_445255.1 CDS SRU_1128 NC_007677.1 1420801 1422093 D identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 1420801..1422093 Salinibacter ruber DSM 13855 3851671 YP_445256.1 CDS SRU_1129 NC_007677.1 1422086 1423375 D identified by match to protein family HMM PF01979; amidohydrolase family protein 1422086..1423375 Salinibacter ruber DSM 13855 3852716 YP_445257.1 CDS SRU_1130 NC_007677.1 1423404 1424462 R identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase complement(1423404..1424462) Salinibacter ruber DSM 13855 3850392 YP_445258.1 CDS SRU_1132 NC_007677.1 1424689 1426104 R hypothetical protein complement(1424689..1426104) Salinibacter ruber DSM 13855 3850624 YP_445259.1 CDS SRU_1133 NC_007677.1 1426204 1427409 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00238; lysine 2,3-aminomutase YodO family protein complement(1426204..1427409) Salinibacter ruber DSM 13855 3850474 YP_445260.1 CDS SRU_1134 NC_007677.1 1427632 1427850 D identified by match to protein family HMM PF04255; hypothetical protein 1427632..1427850 Salinibacter ruber DSM 13855 3852895 YP_445261.1 CDS SRU_1135 NC_007677.1 1428220 1429104 R identified by match to protein family HMM PF07478; D-alanine--D-alanine ligase complement(1428220..1429104) Salinibacter ruber DSM 13855 3853155 YP_445262.1 CDS SRU_1136 NC_007677.1 1429488 1429802 D hypothetical protein 1429488..1429802 Salinibacter ruber DSM 13855 3852299 YP_445263.1 CDS SRU_1137 NC_007677.1 1429929 1431542 D identified by match to protein family HMM PF03553; Na(+)/H(+) antiporter family protein 1429929..1431542 Salinibacter ruber DSM 13855 3850586 YP_445264.1 CDS ppsA NC_007677.1 1431595 1434069 R identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01418; phosphoenolpyruvate synthase complement(1431595..1434069) Salinibacter ruber DSM 13855 3851610 YP_445265.1 CDS ahcY NC_007677.1 1434546 1435823 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 1434546..1435823 Salinibacter ruber DSM 13855 3852944 YP_445266.1 CDS SRU_1140 NC_007677.1 1436161 1436442 D hypothetical protein 1436161..1436442 Salinibacter ruber DSM 13855 3852823 YP_445267.1 CDS SRU_1141 NC_007677.1 1436753 1437535 D identified by match to protein family HMM PF07973; alanyl-tRNA synthetase 1436753..1437535 Salinibacter ruber DSM 13855 3852034 YP_445268.1 CDS SRU_1142 NC_007677.1 1437602 1438384 D identified by match to protein family HMM PF00288; GHMP kinases ATP-binding protein 1437602..1438384 Salinibacter ruber DSM 13855 3851258 YP_445269.1 CDS SRU_1143 NC_007677.1 1438503 1440524 D identified by match to protein family HMM PF01804; penicillin amidase superfamily protein 1438503..1440524 Salinibacter ruber DSM 13855 3851281 YP_445270.1 CDS SRU_1144 NC_007677.1 1440651 1441127 D hypothetical protein 1440651..1441127 Salinibacter ruber DSM 13855 3852731 YP_445271.1 CDS SRU_1145 NC_007677.1 1441170 1441514 R identified by match to protein family HMM PF00037; ferredoxin-1 complement(1441170..1441514) Salinibacter ruber DSM 13855 3853126 YP_445272.1 CDS ruvB NC_007677.1 1441721 1442755 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1441721..1442755) Salinibacter ruber DSM 13855 3853027 YP_445273.1 CDS rpoN NC_007677.1 1443048 1444562 D identified by match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor 1443048..1444562 Salinibacter ruber DSM 13855 3851587 YP_445274.1 CDS SRU_1148 NC_007677.1 1444605 1445402 R hypothetical protein complement(1444605..1445402) Salinibacter ruber DSM 13855 3851965 YP_445275.1 CDS SRU_1149 NC_007677.1 1445566 1447080 D identified by match to protein family HMM PF00266; aminotransferase 1445566..1447080 Salinibacter ruber DSM 13855 3851430 YP_445276.1 CDS fus NC_007677.1 1447095 1449218 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; elongation factor G complement(1447095..1449218) Salinibacter ruber DSM 13855 3850510 YP_445277.1 CDS SRU_1151 NC_007677.1 1449505 1449996 D identified by match to protein family HMM PF04214; hypothetical protein 1449505..1449996 Salinibacter ruber DSM 13855 3852218 YP_445278.1 CDS SRU_1152 NC_007677.1 1450000 1450635 D identified by match to protein family HMM PF07920; hypothetical protein 1450000..1450635 Salinibacter ruber DSM 13855 3850983 YP_445279.1 CDS fabG NC_007677.1 1450788 1451609 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1450788..1451609 Salinibacter ruber DSM 13855 3851647 YP_445280.1 CDS SRU_1154 NC_007677.1 1451652 1452353 D identified by match to protein family HMM PF00814; glycoprotease (M22) metalloprotease 1451652..1452353 Salinibacter ruber DSM 13855 3851387 YP_445281.1 CDS accD NC_007677.1 1452467 1453315 D identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1452467..1453315 Salinibacter ruber DSM 13855 3851163 YP_445282.1 CDS SRU_1156 NC_007677.1 1453601 1456054 D hypothetical protein 1453601..1456054 Salinibacter ruber DSM 13855 3852629 YP_445283.1 CDS SRU_1157 NC_007677.1 1456175 1457215 D surface antigen 1456175..1457215 Salinibacter ruber DSM 13855 3853070 YP_445284.1 CDS SRU_1158 NC_007677.1 1457246 1459105 D identified by match to protein family HMM PF01839; FG-GAP repeat-containing protein 1457246..1459105 Salinibacter ruber DSM 13855 3852808 YP_445285.1 CDS SRU_1159 NC_007677.1 1459132 1459599 R hypothetical protein complement(1459132..1459599) Salinibacter ruber DSM 13855 3852350 YP_445286.1 CDS uvrB NC_007677.1 1459842 1461917 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1459842..1461917 Salinibacter ruber DSM 13855 3850622 YP_445287.1 CDS SRU_1161 NC_007677.1 1461993 1463219 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase MetC complement(1461993..1463219) Salinibacter ruber DSM 13855 3852873 YP_445288.1 CDS rpmE NC_007677.1 1463613 1463867 D identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 1463613..1463867 Salinibacter ruber DSM 13855 3850915 YP_445289.1 CDS pyn NC_007677.1 1463913 1465382 D identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase 1463913..1465382 Salinibacter ruber DSM 13855 3852959 YP_445290.1 CDS SRU_1164 NC_007677.1 1465450 1466238 D identified by match to protein family HMM PF04012; hypothetical protein 1465450..1466238 Salinibacter ruber DSM 13855 3850668 YP_445291.1 CDS SRU_1165 NC_007677.1 1466309 1467499 R hypothetical protein complement(1466309..1467499) Salinibacter ruber DSM 13855 3853041 YP_445292.1 CDS SRU_1166 NC_007677.1 1467810 1468412 R hypothetical protein complement(1467810..1468412) Salinibacter ruber DSM 13855 3850796 YP_445293.1 CDS moaC NC_007677.1 1468461 1468973 R identified by match to protein family HMM PF01967; match to protein family HMM TIGR00581; molybdenum cofactor biosynthesis protein C complement(1468461..1468973) Salinibacter ruber DSM 13855 3851768 YP_445294.1 CDS SRU_1168 NC_007677.1 1469092 1470696 R identified by match to protein family HMM PF07969; amidohydrolase complement(1469092..1470696) Salinibacter ruber DSM 13855 3851554 YP_445295.1 CDS gltB NC_007677.1 1471008 1475552 D identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 1471008..1475552 Salinibacter ruber DSM 13855 3851709 YP_445296.1 CDS gltD NC_007677.1 1475627 1477207 D identified by match to protein family HMM PF07992; match to protein family HMM TIGR01317; glutamate synthase 1475627..1477207 Salinibacter ruber DSM 13855 3851034 YP_445297.1 CDS dtd NC_007677.1 1477217 1477669 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1477217..1477669) Salinibacter ruber DSM 13855 3850599 YP_445298.1 CDS rdgB NC_007677.1 1477715 1478326 R identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase complement(1477715..1478326) Salinibacter ruber DSM 13855 3852799 YP_445299.1 CDS kgd NC_007677.1 1478869 1482600 R kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; alpha-ketoglutarate decarboxylase complement(1478869..1482600) Salinibacter ruber DSM 13855 3850786 YP_445300.1 CDS SRU_1174 NC_007677.1 1482716 1483735 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein complement(1482716..1483735) Salinibacter ruber DSM 13855 3851260 YP_445301.1 CDS SRU_1175 NC_007677.1 1484028 1484789 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein PhoP complement(1484028..1484789) Salinibacter ruber DSM 13855 3851497 YP_445302.1 CDS recO NC_007677.1 1485885 1486667 D identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 1485885..1486667 Salinibacter ruber DSM 13855 3852898 YP_445303.1 CDS lexA NC_007677.1 1486777 1487427 D identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498; LexA repressor 1486777..1487427 Salinibacter ruber DSM 13855 3850661 YP_445304.1 CDS SRU_1178 NC_007677.1 1487458 1488111 D methyltransferase 1487458..1488111 Salinibacter ruber DSM 13855 3851474 YP_445305.1 CDS phrB NC_007677.1 1488328 1489779 R identified by similarity to SP:P05327; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase complement(1488328..1489779) Salinibacter ruber DSM 13855 3851378 YP_445306.1 CDS SRU_1181 NC_007677.1 1490437 1491108 R hypothetical protein complement(1490437..1491108) Salinibacter ruber DSM 13855 3852723 YP_445307.1 CDS SRU_1182 NC_007677.1 1491148 1494279 R identified by match to protein family HMM PF00873; acriflavine resistance protein complement(1491148..1494279) Salinibacter ruber DSM 13855 3852764 YP_445308.1 CDS SRU_1183 NC_007677.1 1494328 1495650 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane efflux protein complement(1494328..1495650) Salinibacter ruber DSM 13855 3852646 YP_445309.1 CDS SRU_1184 NC_007677.1 1495976 1496587 D identified by match to protein family HMM PF01205; hypothetical protein 1495976..1496587 Salinibacter ruber DSM 13855 3851735 YP_445310.1 CDS rnhA NC_007677.1 1496687 1497271 R identified by match to protein family HMM PF00075; RNase H complement(1496687..1497271) Salinibacter ruber DSM 13855 3852166 YP_445311.1 CDS obgE NC_007677.1 1497310 1498329 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1497310..1498329 Salinibacter ruber DSM 13855 3850530 YP_445312.1 CDS dprA NC_007677.1 1498326 1499492 D identified by match to protein family HMM PF00633; match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA processing protein DprA 1498326..1499492 Salinibacter ruber DSM 13855 3850491 YP_445313.1 CDS SRU_1188 NC_007677.1 1499450 1500826 D identified by match to protein family HMM PF00266; aminotransferase 1499450..1500826 Salinibacter ruber DSM 13855 3852568 YP_445314.1 CDS rluD NC_007677.1 1501033 1502082 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1501033..1502082 Salinibacter ruber DSM 13855 3851576 YP_445315.1 CDS SRU_1190 NC_007677.1 1502349 1502849 D identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 1502349..1502849 Salinibacter ruber DSM 13855 3853088 YP_445316.1 CDS SRU_1191 NC_007677.1 1503043 1503492 D hypothetical protein 1503043..1503492 Salinibacter ruber DSM 13855 3853106 YP_445317.1 CDS SRU_1192 NC_007677.1 1503584 1505278 R identified by match to protein family HMM PF03544; match to protein family HMM PF05569; match to protein family HMM TIGR01352; TonB family protein complement(1503584..1505278) Salinibacter ruber DSM 13855 3850795 YP_445318.1 CDS SRU_1193 NC_007677.1 1505268 1505681 R identified by match to protein family HMM PF03965; BlaI/MecI/CopY family transcriptional regulator complement(1505268..1505681) Salinibacter ruber DSM 13855 3850372 YP_445319.1 CDS SRU_1194 NC_007677.1 1505782 1506495 R identified by match to protein family HMM PF00535; glycosyl transferase-like protein complement(1505782..1506495) Salinibacter ruber DSM 13855 3850808 YP_445320.1 CDS SRU_1195 NC_007677.1 1506650 1507543 R identified by match to protein family HMM PF02274; amidinotransferase complement(1506650..1507543) Salinibacter ruber DSM 13855 3852563 YP_445321.1 CDS SRU_1196 NC_007677.1 1507636 1508298 R hypothetical protein complement(1507636..1508298) Salinibacter ruber DSM 13855 3850581 YP_445322.1 CDS SRU_1197 NC_007677.1 1508490 1509434 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1508490..1509434) Salinibacter ruber DSM 13855 3850976 YP_445323.1 CDS SRU_1198 NC_007677.1 1509440 1510381 R identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein complement(1509440..1510381) Salinibacter ruber DSM 13855 3850938 YP_445324.1 CDS pgk NC_007677.1 1510427 1511623 R identified by match to protein family HMM PF00162; phosphoglycerate kinase complement(1510427..1511623) Salinibacter ruber DSM 13855 3851848 YP_445325.1 CDS gap NC_007677.1 1511715 1512719 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I complement(1511715..1512719) Salinibacter ruber DSM 13855 3850595 YP_445326.1 CDS SRU_1201 NC_007677.1 1513190 1513765 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 1513190..1513765 Salinibacter ruber DSM 13855 3851117 YP_445327.1 CDS dctD NC_007677.1 1513914 1515293 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; C4-dicarboxylate transport transcriptional regulatory protein 1513914..1515293 Salinibacter ruber DSM 13855 3851361 YP_445328.1 CDS SRU_1203 NC_007677.1 1515329 1516144 D identified by match to protein family HMM PF00005; lipoprotein-releasing system ATP-binding protein lolD 1515329..1516144 Salinibacter ruber DSM 13855 3851207 YP_445329.1 CDS SRU_1204 NC_007677.1 1516391 1517032 D identified by match to protein family HMM PF02190; ATP-dependent protease La 1516391..1517032 Salinibacter ruber DSM 13855 3850684 YP_445330.1 CDS SRU_1205 NC_007677.1 1517054 1517965 D identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 1517054..1517965 Salinibacter ruber DSM 13855 3852397 YP_445331.1 CDS SRU_1206 NC_007677.1 1518042 1518299 D identified by match to protein family HMM PF00512; MCP domain-containing signal transducer 1518042..1518299 Salinibacter ruber DSM 13855 3851351 YP_445332.1 CDS SRU_1207 NC_007677.1 1518764 1519843 D hypothetical protein 1518764..1519843 Salinibacter ruber DSM 13855 3850517 YP_445333.1 CDS SRU_1208 NC_007677.1 1520060 1520683 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1520060..1520683 Salinibacter ruber DSM 13855 3850388 YP_445334.1 CDS fadD NC_007677.1 1520747 1522645 D identified by match to protein family HMM PF00501; acyl-CoA synthetase, long-chain-fatty acid:CoA ligase 1520747..1522645 Salinibacter ruber DSM 13855 3850785 YP_445335.1 CDS SRU_1210 NC_007677.1 1522773 1525181 D identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxyacyl-CoA dehydrogenase 1522773..1525181 Salinibacter ruber DSM 13855 3853038 YP_445336.1 CDS atoB NC_007677.1 1525298 1526503 D identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 1525298..1526503 Salinibacter ruber DSM 13855 3852998 YP_445337.1 CDS SRU_1212 NC_007677.1 1526564 1527310 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 1526564..1527310 Salinibacter ruber DSM 13855 3852787 YP_445338.1 CDS fadE NC_007677.1 1527737 1530307 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1527737..1530307 Salinibacter ruber DSM 13855 3850386 YP_445339.1 CDS SRU_1214 NC_007677.1 1530365 1531219 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 1530365..1531219 Salinibacter ruber DSM 13855 3851547 YP_445340.1 CDS SRU_1216 NC_007677.1 1531268 1532074 D hypothetical protein 1531268..1532074 Salinibacter ruber DSM 13855 3852576 YP_445341.1 CDS hemG NC_007677.1 1532068 1533453 R identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562; protoporphyrinogen oxidase complement(1532068..1533453) Salinibacter ruber DSM 13855 3852421 YP_445342.1 CDS SRU_1217 NC_007677.1 1533686 1533886 D hypothetical protein 1533686..1533886 Salinibacter ruber DSM 13855 3852323 YP_445343.1 CDS SRU_1218 NC_007677.1 1534283 1536379 D identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta 1534283..1536379 Salinibacter ruber DSM 13855 3851948 YP_445344.1 CDS SRU_1219 NC_007677.1 1536401 1536844 R identified by match to protein family HMM PF02566; OsmC-like protein complement(1536401..1536844) Salinibacter ruber DSM 13855 3851093 YP_445345.1 CDS SRU_1220 NC_007677.1 1536925 1537602 D identified by match to protein family HMM PF06803; hypothetical protein 1536925..1537602 Salinibacter ruber DSM 13855 3850460 YP_445346.1 CDS SRU_1221 NC_007677.1 1537686 1538378 D identified by match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin 1537686..1538378 Salinibacter ruber DSM 13855 3852854 YP_445347.1 CDS SRU_1222 NC_007677.1 1538386 1539186 R identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein complement(1538386..1539186) Salinibacter ruber DSM 13855 3851479 YP_445348.1 CDS SRU_1223 NC_007677.1 1539244 1540311 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(1539244..1540311) Salinibacter ruber DSM 13855 3852120 YP_445349.1 CDS SRU_1224 NC_007677.1 1540436 1541437 R identified by match to protein family HMM PF01032; hemin ABC transporter permease complement(1540436..1541437) Salinibacter ruber DSM 13855 3851292 YP_445350.1 CDS SRU_1225 NC_007677.1 1541458 1542510 R identified by match to protein family HMM PF01497; periplasmic binding protein complement(1541458..1542510) Salinibacter ruber DSM 13855 3852332 YP_445351.1 CDS rrp NC_007677.1 1542510 1544081 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199; response regulatory protein 1542510..1544081 Salinibacter ruber DSM 13855 3851716 YP_445352.1 CDS SRU_1227 NC_007677.1 1543999 1545102 D identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 1543999..1545102 Salinibacter ruber DSM 13855 3852497 YP_445353.1 CDS SRU_1228 NC_007677.1 1545153 1546742 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase, mitochondrial 1545153..1546742 Salinibacter ruber DSM 13855 3850656 YP_445354.1 CDS SRU_1229 NC_007677.1 1546643 1547533 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 1546643..1547533 Salinibacter ruber DSM 13855 3851498 YP_445355.1 CDS SRU_1230 NC_007677.1 1547566 1548156 D hypothetical protein 1547566..1548156 Salinibacter ruber DSM 13855 3851526 YP_445356.1 CDS SRU_1231 NC_007677.1 1548173 1549585 R identified by match to protein family HMM PF00282; match to protein family HMM PF01212; pyridoxal-dependent decarboxylase family protein complement(1548173..1549585) Salinibacter ruber DSM 13855 3852986 YP_445357.1 CDS SRU_1232 NC_007677.1 1549632 1550858 R identified by match to protein family HMM PF01266; glycine oxidase complement(1549632..1550858) Salinibacter ruber DSM 13855 3852036 YP_445358.1 CDS thiO NC_007677.1 1550758 1552029 D identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO 1550758..1552029 Salinibacter ruber DSM 13855 3851175 YP_445359.1 CDS thiS NC_007677.1 1552026 1552268 D identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 1552026..1552268 Salinibacter ruber DSM 13855 3852539 YP_445360.1 CDS thiG NC_007677.1 1552317 1553138 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1552317..1553138 Salinibacter ruber DSM 13855 3853110 YP_445361.1 CDS SRU_1236 NC_007677.1 1553494 1554126 D identified by match to protein family HMM PF02581; thiamine-phosphate pyrophosphorylase 1553494..1554126 Salinibacter ruber DSM 13855 3850843 YP_445362.1 CDS thiD NC_007677.1 1554175 1555047 D identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1554175..1555047 Salinibacter ruber DSM 13855 3851787 YP_445363.1 CDS SRU_1239 NC_007677.1 1555501 1556049 D DNA polymerase III subunit gamma 1555501..1556049 Salinibacter ruber DSM 13855 3851691 YP_445364.1 CDS SRU_1240 NC_007677.1 1556234 1556584 D hypothetical protein 1556234..1556584 Salinibacter ruber DSM 13855 3852239 YP_445365.1 CDS SRU_1241 NC_007677.1 1556762 1558552 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; histidine kinase PhoR1 1556762..1558552 Salinibacter ruber DSM 13855 3850385 YP_445366.1 CDS SRU_1242 NC_007677.1 1558614 1559141 R identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein complement(1558614..1559141) Salinibacter ruber DSM 13855 3852870 YP_445367.1 CDS SRU_1243 NC_007677.1 1559182 1559475 R hypothetical protein complement(1559182..1559475) Salinibacter ruber DSM 13855 3850725 YP_445368.1 CDS SRU_1244 NC_007677.1 1559788 1561239 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein 1559788..1561239 Salinibacter ruber DSM 13855 3852303 YP_445369.1 CDS ymxG NC_007677.1 1561424 1563511 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; processing protease 1561424..1563511 Salinibacter ruber DSM 13855 3851052 YP_445370.1 CDS SRU_1246 NC_007677.1 1563682 1564605 D identified by match to protein family HMM PF00682; 3-hydroxy-3-methylglutaryl-CoA lyase 1563682..1564605 Salinibacter ruber DSM 13855 3852806 YP_445371.1 CDS SRU_1247 NC_007677.1 1564643 1565479 R identified by match to protein family HMM PF00149; phosphoesterase complement(1564643..1565479) Salinibacter ruber DSM 13855 3852469 YP_445372.1 CDS SRU_1248 NC_007677.1 1565613 1566626 R hypothetical protein complement(1565613..1566626) Salinibacter ruber DSM 13855 3852776 YP_445373.1 CDS SRU_1249 NC_007677.1 1566699 1568288 R hypothetical protein complement(1566699..1568288) Salinibacter ruber DSM 13855 3850457 YP_445374.1 CDS SRU_1250 NC_007677.1 1568428 1569216 R ABC transporter permease complement(1568428..1569216) Salinibacter ruber DSM 13855 3852559 YP_445375.1 CDS SRU_1251 NC_007677.1 1569266 1570471 R identified by match to protein family HMM PF00005; multidrug ABC transporter ATPase complement(1569266..1570471) Salinibacter ruber DSM 13855 3851444 YP_445376.1 CDS proB NC_007677.1 1570464 1571594 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1570464..1571594 Salinibacter ruber DSM 13855 3851194 YP_445377.1 CDS proA NC_007677.1 1571703 1573013 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR00407; gamma-glutamyl phosphate reductase 1571703..1573013 Salinibacter ruber DSM 13855 3851520 YP_445378.1 CDS SRU_1254 NC_007677.1 1573046 1573816 R hypothetical protein complement(1573046..1573816) Salinibacter ruber DSM 13855 3852366 YP_445379.1 CDS SRU_1255 NC_007677.1 1573781 1575784 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; trk active potasium channel 1573781..1575784 Salinibacter ruber DSM 13855 3851625 YP_445380.1 CDS SRU_1256 NC_007677.1 1575808 1576884 R hypothetical protein complement(1575808..1576884) Salinibacter ruber DSM 13855 3852661 YP_445381.1 CDS gcvP NC_007677.1 1577021 1579963 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(1577021..1579963) Salinibacter ruber DSM 13855 3851074 YP_445382.1 CDS SRU_1258 NC_007677.1 1580417 1581973 D identified by match to protein family HMM PF00282; match to protein family HMM PF01212; L-2,4-diaminobutyrate decarboxylase 1580417..1581973 Salinibacter ruber DSM 13855 3851944 YP_445383.1 CDS SRU_1259 NC_007677.1 1582138 1583334 D identified by match to protein family HMM PF07690; D-lactate dehydrogenase 1582138..1583334 Salinibacter ruber DSM 13855 3850489 YP_445384.1 CDS dehII NC_007677.1 1583437 1584126 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01428; match to protein family HMM TIGR01493; haloacid dehalogenase 1583437..1584126 Salinibacter ruber DSM 13855 3851840 YP_445385.1 CDS SRU_1261 NC_007677.1 1584256 1589325 R identified by match to protein family HMM PF04357; hypothetical protein complement(1584256..1589325) Salinibacter ruber DSM 13855 3851876 YP_445386.1 CDS SRU_1262 NC_007677.1 1589489 1591612 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein complement(1589489..1591612) Salinibacter ruber DSM 13855 3852171 YP_445387.1 CDS yihY NC_007677.1 1591832 1592941 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein complement(1591832..1592941) Salinibacter ruber DSM 13855 3852364 YP_445388.1 CDS SRU_1264 NC_007677.1 1593056 1595092 R hypothetical protein complement(1593056..1595092) Salinibacter ruber DSM 13855 3852482 YP_445389.1 CDS SRU_1265 NC_007677.1 1595218 1595877 R identified by match to protein family HMM PF01712; deoxynucleoside kinase subfamily protein complement(1595218..1595877) Salinibacter ruber DSM 13855 3851595 YP_445390.1 CDS SRU_1266 NC_007677.1 1596072 1596584 R hypothetical protein complement(1596072..1596584) Salinibacter ruber DSM 13855 3852411 YP_445391.1 CDS SRU_1267 NC_007677.1 1596792 1597757 R identified by match to protein family HMM PF00248; aldehyde reductase complement(1596792..1597757) Salinibacter ruber DSM 13855 3850865 YP_445392.1 CDS SRU_1268 NC_007677.1 1597908 1599236 R identified by match to protein family HMM PF00266; class V aminotransferase complement(1597908..1599236) Salinibacter ruber DSM 13855 3853160 YP_445393.1 CDS metE NC_007677.1 1599300 1601609 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1599300..1601609 Salinibacter ruber DSM 13855 3850382 YP_445394.1 CDS ilvA NC_007677.1 1601816 1602811 R catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase complement(1601816..1602811) Salinibacter ruber DSM 13855 3852098 YP_445395.1 CDS SRU_1271 NC_007677.1 1603943 1605463 D identified by match to protein family HMM PF04932; pilin glycosylation enzyme 1603943..1605463 Salinibacter ruber DSM 13855 3851446 YP_445396.1 CDS SRU_1272 NC_007677.1 1605875 1607164 D identified by match to protein family HMM PF00482; type II secretion system protein F 1605875..1607164 Salinibacter ruber DSM 13855 3852374 YP_445397.1 CDS SRU_1273 NC_007677.1 1607346 1609478 D identified by match to protein family HMM PF00437; type IV pilin 1607346..1609478 Salinibacter ruber DSM 13855 3850430 YP_445398.1 CDS SRU_1274 NC_007677.1 1609587 1610099 D hypothetical protein 1609587..1610099 Salinibacter ruber DSM 13855 3851004 YP_445399.1 CDS SRU_1275 NC_007677.1 1610326 1610976 D hypothetical protein 1610326..1610976 Salinibacter ruber DSM 13855 3852860 YP_445400.1 CDS SRU_1276 NC_007677.1 1611344 1612135 D hypothetical protein 1611344..1612135 Salinibacter ruber DSM 13855 3850406 YP_445401.1 CDS pilT NC_007677.1 1612496 1613926 D identified by match to protein family HMM PF00437; twitching motility protein PilT 1612496..1613926 Salinibacter ruber DSM 13855 3852792 YP_445402.1 CDS SRU_1278 NC_007677.1 1614149 1616200 D identified by match to protein family HMM PF05137; fimbrial assembly protein (PilN) 1614149..1616200 Salinibacter ruber DSM 13855 3852172 YP_445403.1 CDS SRU_1279 NC_007677.1 1616234 1617484 R hypothetical protein complement(1616234..1617484) Salinibacter ruber DSM 13855 3852082 YP_445404.1 CDS SRU_1280 NC_007677.1 1617501 1618781 D identified by match to protein family HMM PF00263; general (Type II) secretion pathway (GSP) D protein 1617501..1618781 Salinibacter ruber DSM 13855 3852836 YP_445405.1 CDS SRU_1281 NC_007677.1 1618901 1619701 D identified by match to protein family HMM PF01261; AP endonuclease 1618901..1619701 Salinibacter ruber DSM 13855 3852780 YP_445406.1 CDS gatC NC_007677.1 1619807 1620094 D identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 1619807..1620094 Salinibacter ruber DSM 13855 3853163 YP_445407.1 CDS SRU_1283 NC_007677.1 1620264 1620677 D identified by match to protein family HMM PF01047; transcriptional regulator 1620264..1620677 Salinibacter ruber DSM 13855 3851221 YP_445408.1 CDS SRU_1284 NC_007677.1 1620792 1621151 D hypothetical protein 1620792..1621151 Salinibacter ruber DSM 13855 3850664 YP_445409.1 CDS galT NC_007677.1 1621787 1622899 R identified by match to protein family HMM TIGR00209; galactose-1-phosphate uridylyltransferase complement(1621787..1622899) Salinibacter ruber DSM 13855 3851502 YP_445410.1 CDS SRU_1286 NC_007677.1 1623361 1625439 D identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; sodium/alanine symporter 1623361..1625439 Salinibacter ruber DSM 13855 3852814 YP_445411.1 CDS upp NC_007677.1 1625518 1626150 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 1625518..1626150 Salinibacter ruber DSM 13855 3853154 YP_445412.1 CDS SRU_1288 NC_007677.1 1626198 1626560 R crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein complement(1626198..1626560) Salinibacter ruber DSM 13855 3852606 YP_445413.1 CDS SRU_1289 NC_007677.1 1626687 1628639 D identified by match to protein family HMM PF03553; integral membrane protein- Na+H+ antiporter 1626687..1628639 Salinibacter ruber DSM 13855 3851699 YP_445414.1 CDS SRU_1290 NC_007677.1 1627958 1629061 D identified by match to protein family HMM PF01050; match to protein family HMM PF07883; mannose-1-phosphate guanylyltransferase 1627958..1629061 Salinibacter ruber DSM 13855 3851617 YP_445415.1 CDS def NC_007677.1 1629197 1629784 D identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 1629197..1629784 Salinibacter ruber DSM 13855 3851213 YP_445416.1 CDS SRU_1292 NC_007677.1 1629846 1630511 D hypothetical protein 1629846..1630511 Salinibacter ruber DSM 13855 3851707 YP_445417.1 CDS SRU_1293 NC_007677.1 1630474 1631355 D identified by match to protein family HMM PF00005; hemin ABC transporter ATP-binding protein 1630474..1631355 Salinibacter ruber DSM 13855 3850391 YP_445418.1 CDS SRU_1294 NC_007677.1 1631454 1632050 D identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 1631454..1632050 Salinibacter ruber DSM 13855 3851543 YP_445419.1 CDS SRU_1295 NC_007677.1 1632203 1633396 D identified by match to protein family HMM PF01551; M24/M37 family peptidase 1632203..1633396 Salinibacter ruber DSM 13855 3851957 YP_445420.1 CDS SRU_1296 NC_007677.1 1633353 1634390 D identified by match to protein family HMM PF01112; asparaginase 1633353..1634390 Salinibacter ruber DSM 13855 3850905 YP_445421.1 CDS SRU_1297 NC_007677.1 1634396 1636594 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein complement(1634396..1636594) Salinibacter ruber DSM 13855 3850503 YP_445422.1 CDS spoIID NC_007677.1 1636584 1637828 R identified by match to protein family HMM TIGR02669; sporulation protein SpoIID complement(1636584..1637828) Salinibacter ruber DSM 13855 3852592 YP_445423.1 CDS SRU_1299 NC_007677.1 1638051 1638839 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 1638051..1638839 Salinibacter ruber DSM 13855 3853089 YP_445424.1 CDS dnaK NC_007677.1 1639281 1641284 R identified by similarity to SP:P04475; match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK complement(1639281..1641284) Salinibacter ruber DSM 13855 3852936 YP_445425.1 CDS pgsA NC_007677.1 1641646 1642251 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1641646..1642251 Salinibacter ruber DSM 13855 3853081 YP_445426.1 CDS pyrE NC_007677.1 1642295 1642972 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase 1642295..1642972 Salinibacter ruber DSM 13855 3852574 YP_445427.1 CDS cinA NC_007677.1 1643066 1644304 D identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence/damage-inducible protein CinA 1643066..1644304 Salinibacter ruber DSM 13855 3852490 YP_445428.1 CDS SRU_1304 NC_007677.1 1644439 1645422 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 1644439..1645422 Salinibacter ruber DSM 13855 3852405 YP_445429.1 CDS osmC NC_007677.1 1645499 1645966 R identified by match to protein family HMM PF02566; osmotically inducible protein C complement(1645499..1645966) Salinibacter ruber DSM 13855 3852320 YP_445430.1 CDS SRU_1306 NC_007677.1 1646054 1646980 R identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein complement(1646054..1646980) Salinibacter ruber DSM 13855 3852869 YP_445431.1 CDS SRU_1307 NC_007677.1 1646977 1648065 R identified by match to protein family HMM PF04307; integral membrane protein complement(1646977..1648065) Salinibacter ruber DSM 13855 3851098 YP_445432.1 CDS SRU_1308 NC_007677.1 1648083 1648664 D hypothetical protein 1648083..1648664 Salinibacter ruber DSM 13855 3851020 YP_445433.1 CDS SRU_1309 NC_007677.1 1648562 1649818 D hypothetical protein 1648562..1649818 Salinibacter ruber DSM 13855 3852827 YP_445434.1 CDS yneN NC_007677.1 1649828 1650400 R thioredoxin complement(1649828..1650400) Salinibacter ruber DSM 13855 3850652 YP_445435.1 CDS SRU_1311 NC_007677.1 1650409 1650768 R general stress protein complement(1650409..1650768) Salinibacter ruber DSM 13855 3852246 YP_445436.1 CDS pepF NC_007677.1 1650943 1652766 D identified by match to protein family HMM PF01432; oligoendopeptidase F 1650943..1652766 Salinibacter ruber DSM 13855 3851322 YP_445437.1 CDS SRU_1313 NC_007677.1 1652800 1653438 D SAM-dependent methyltransferase 1652800..1653438 Salinibacter ruber DSM 13855 3850432 YP_445438.1 CDS SRU_1314 NC_007677.1 1653520 1654569 D identified by match to protein family HMM PF00582; universal stress protein 1653520..1654569 Salinibacter ruber DSM 13855 3850963 YP_445439.1 CDS SRU_1315 NC_007677.1 1654556 1655521 D identified by match to protein family HMM PF00582; universal stress protein 1654556..1655521 Salinibacter ruber DSM 13855 3852230 YP_445440.1 CDS SRU_1316 NC_007677.1 1655563 1656255 D identified by match to protein family HMM PF01902; hypothetical protein 1655563..1656255 Salinibacter ruber DSM 13855 3852929 YP_445441.1 CDS clpC NC_007677.1 1656396 1659023 R identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; ATP-dependent Clp protease, ATPase subunit complement(1656396..1659023) Salinibacter ruber DSM 13855 3851866 YP_445442.1 CDS SRU_1318 NC_007677.1 1659330 1659740 R identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein complement(1659330..1659740) Salinibacter ruber DSM 13855 3851804 YP_445443.1 CDS SRU_1320 NC_007677.1 1660099 1660614 D hypothetical protein 1660099..1660614 Salinibacter ruber DSM 13855 3853184 YP_445444.1 CDS SRU_1319 NC_007677.1 1660605 1663070 R identified by match to protein family HMM PF00326; match to protein family HMM PF00930; dipeptidyl-peptidase complement(1660605..1663070) Salinibacter ruber DSM 13855 3850738 YP_445445.1 CDS SRU_1321 NC_007677.1 1663459 1664811 R hypothetical protein complement(1663459..1664811) Salinibacter ruber DSM 13855 3850789 YP_445446.1 CDS SRU_1322 NC_007677.1 1665591 1666361 D hypothetical protein 1665591..1666361 Salinibacter ruber DSM 13855 3852914 YP_445447.1 CDS SRU_1323 NC_007677.1 1666436 1667149 R identified by match to protein family HMM PF00383; cytidine deaminase complement(1666436..1667149) Salinibacter ruber DSM 13855 3850909 YP_445448.1 CDS SRU_1324 NC_007677.1 1667134 1668327 D identified by match to protein family HMM PF00155; aspartate aminotransferase 1667134..1668327 Salinibacter ruber DSM 13855 3851994 YP_445449.1 CDS SRU_1325 NC_007677.1 1668363 1669244 R identified by match to protein family HMM PF00483; nucleotidyl transferase complement(1668363..1669244) Salinibacter ruber DSM 13855 3852472 YP_445450.1 CDS SRU_1326 NC_007677.1 1669241 1670242 R identified by match to protein family HMM PF00459; match to protein family HMM TIGR01330; 3'(2'),5'-bisphosphate nucleotidase complement(1669241..1670242) Salinibacter ruber DSM 13855 3852286 YP_445451.1 CDS SRU_1327 NC_007677.1 1670282 1670614 R hypothetical protein complement(1670282..1670614) Salinibacter ruber DSM 13855 3852358 YP_445452.1 CDS SRU_1328 NC_007677.1 1670801 1671970 R identified by similarity to GB:AAR35562.1; hypothetical protein complement(1670801..1671970) Salinibacter ruber DSM 13855 3850626 YP_445453.1 CDS SRU_1329 NC_007677.1 1672070 1673287 R identified by match to protein family HMM PF00999; potassium-efflux system protein complement(1672070..1673287) Salinibacter ruber DSM 13855 3851980 YP_445454.1 CDS SRU_1330 NC_007677.1 1673398 1675941 R identified by match to protein family HMM PF02687; permease complement(1673398..1675941) Salinibacter ruber DSM 13855 3851490 YP_445455.1 CDS SRU_1331 NC_007677.1 1676036 1676884 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1676036..1676884) Salinibacter ruber DSM 13855 3850922 YP_445456.1 CDS SRU_1332 NC_007677.1 1677060 1678499 R hypothetical protein complement(1677060..1678499) Salinibacter ruber DSM 13855 3852721 YP_445457.1 CDS SRU_1333 NC_007677.1 1678565 1680646 R hypothetical protein complement(1678565..1680646) Salinibacter ruber DSM 13855 3853144 YP_445458.1 CDS pyrB NC_007677.1 1681513 1682481 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase complement(1681513..1682481) Salinibacter ruber DSM 13855 3853204 YP_445459.1 CDS SRU_1335 NC_007677.1 1682537 1683151 R identified by match to protein family HMM PF00156; phosphoribosyl transferase domain-containing protein complement(1682537..1683151) Salinibacter ruber DSM 13855 3851713 YP_445460.1 CDS SRU_1336 NC_007677.1 1683283 1684215 D identified by match to protein family HMM PF01882; hypothetical protein 1683283..1684215 Salinibacter ruber DSM 13855 3852338 YP_445461.1 CDS SRU_1337 NC_007677.1 1684222 1684890 R hypothetical protein complement(1684222..1684890) Salinibacter ruber DSM 13855 3851969 YP_445462.1 CDS SRU_1338 NC_007677.1 1684958 1686286 R identified by match to protein family HMM PF01594; transporter complement(1684958..1686286) Salinibacter ruber DSM 13855 3853044 YP_445463.1 CDS SRU_1339 NC_007677.1 1686368 1687783 D identified by match to protein family HMM PF01937; hypothetical protein 1686368..1687783 Salinibacter ruber DSM 13855 3851251 YP_445464.1 CDS SRU_1340 NC_007677.1 1687865 1688188 D identified by match to protein family HMM PF01985; CRS1/YhbY domain-containing superfamily 1687865..1688188 Salinibacter ruber DSM 13855 3851461 YP_445465.1 CDS SRU_1341 NC_007677.1 1688197 1689021 R identified by match to protein family HMM PF00753; metallo-beta-lactamase-related protein complement(1688197..1689021) Salinibacter ruber DSM 13855 3851219 YP_445466.1 CDS SRU_1342 NC_007677.1 1689207 1690034 R identified by match to protein family HMM PF00459; inositol monophosphatase family protein complement(1689207..1690034) Salinibacter ruber DSM 13855 3851551 YP_445467.1 CDS rnc NC_007677.1 1690092 1690838 R identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III complement(1690092..1690838) Salinibacter ruber DSM 13855 3852784 YP_445468.1 CDS SRU_1344 NC_007677.1 1690894 1692381 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase-like protein yneI 1690894..1692381 Salinibacter ruber DSM 13855 3852812 YP_445469.1 CDS SRU_1345 NC_007677.1 1692672 1693568 D hypothetical protein 1692672..1693568 Salinibacter ruber DSM 13855 3850369 YP_445470.1 CDS SRU_1346 NC_007677.1 1693663 1694595 D integral membrane protein 1693663..1694595 Salinibacter ruber DSM 13855 3853108 YP_445471.1 CDS SRU_1347 NC_007677.1 1694704 1695348 D hypothetical protein 1694704..1695348 Salinibacter ruber DSM 13855 3850409 YP_445472.1 CDS SRU_1348 NC_007677.1 1695677 1696198 D hypothetical protein 1695677..1696198 Salinibacter ruber DSM 13855 3851408 YP_445473.1 CDS gpm NC_007677.1 1696259 1696936 D identified by match to protein family HMM PF00300; phosphoglycerate mutase 1696259..1696936 Salinibacter ruber DSM 13855 3851954 YP_445474.1 CDS SRU_1350 NC_007677.1 1696917 1698455 D identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543; isochorismate synthase 1696917..1698455 Salinibacter ruber DSM 13855 3852590 YP_445475.1 CDS menD NC_007677.1 1698481 1700256 D identified by match to protein family HMM PF02776; match to protein family HMM TIGR00173; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1698481..1700256 Salinibacter ruber DSM 13855 3852639 YP_445476.1 CDS SRU_1352 NC_007677.1 1700329 1701345 R identified by match to protein family HMM PF00753; match to protein family HMM TIGR01409; cyclase complement(1700329..1701345) Salinibacter ruber DSM 13855 3851767 YP_445477.1 CDS menA NC_007677.1 1701392 1702360 D identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1701392..1702360 Salinibacter ruber DSM 13855 3850513 YP_445478.1 CDS menC NC_007677.1 1702374 1703474 D identified by match to protein family HMM TIGR01927; o-succinylbenzoic acid (OSB) synthetase 1702374..1703474 Salinibacter ruber DSM 13855 3850355 YP_445479.1 CDS menE NC_007677.1 1703485 1704912 D identified by match to protein family HMM PF00501; match to protein family HMM TIGR01923; o-succinylbenzoate--CoA ligase 1703485..1704912 Salinibacter ruber DSM 13855 3851638 YP_445480.1 CDS SRU_1356 NC_007677.1 1704921 1705679 D identified by match to protein family HMM PF00583; acetyltransferase 1704921..1705679 Salinibacter ruber DSM 13855 3850873 YP_445481.1 CDS SRU_1357 NC_007677.1 1705741 1706682 R identified by match to protein family HMM PF07228; transcriptional regulator complement(1705741..1706682) Salinibacter ruber DSM 13855 3853156 YP_445482.1 CDS SRU_1358 NC_007677.1 1706835 1707284 R identified by match to protein family HMM PF02518; hypothetical protein complement(1706835..1707284) Salinibacter ruber DSM 13855 3851151 YP_445483.1 CDS SRU_1359 NC_007677.1 1707351 1707692 R identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-sigma B factor antagonist complement(1707351..1707692) Salinibacter ruber DSM 13855 3851800 YP_445484.1 CDS SRU_1360 NC_007677.1 1708182 1708649 D hypothetical protein 1708182..1708649 Salinibacter ruber DSM 13855 3851731 YP_445485.1 CDS SRU_1361 NC_007677.1 1708775 1710922 D hypothetical protein 1708775..1710922 Salinibacter ruber DSM 13855 3852092 YP_445486.1 CDS SRU_1362 NC_007677.1 1710919 1711704 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1710919..1711704 Salinibacter ruber DSM 13855 3853005 YP_445487.1 CDS glmS NC_007677.1 1711732 1713675 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1711732..1713675 Salinibacter ruber DSM 13855 3850778 YP_445488.1 CDS prfA NC_007677.1 1713883 1714956 D identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 1713883..1714956 Salinibacter ruber DSM 13855 3851818 YP_445489.1 CDS SRU_1365 NC_007677.1 1715034 1715642 D identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 1715034..1715642 Salinibacter ruber DSM 13855 3851810 YP_445490.1 CDS rpsR NC_007677.1 1715696 1715908 D identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 1715696..1715908 Salinibacter ruber DSM 13855 3851133 YP_445491.1 CDS rplI NC_007677.1 1715958 1716407 D identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 1715958..1716407 Salinibacter ruber DSM 13855 3853182 YP_445492.1 CDS SRU_1368 NC_007677.1 1716863 1718011 R identified by match to protein family HMM PF01053; match to protein family HMM PF01212; cystathionine beta-lyase MetC complement(1716863..1718011) Salinibacter ruber DSM 13855 3850955 YP_445493.1 CDS dnaA NC_007677.1 1718032 1719726 R identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA complement(1718032..1719726) Salinibacter ruber DSM 13855 3850346 YP_445494.1 CDS hppD NC_007677.1 1720011 1721165 R identified by match to protein family HMM PF00903; match to protein family HMM TIGR01263; 4-hydroxyphenylpyruvate dioxygenase complement(1720011..1721165) Salinibacter ruber DSM 13855 3851915 YP_445495.1 CDS SRU_1371 NC_007677.1 1721257 1721991 R identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB complement(1721257..1721991) Salinibacter ruber DSM 13855 3852211 YP_445496.1 CDS SRU_1372 NC_007677.1 1722145 1723158 D identified by match to protein family HMM PF00107; zinc-binding alcohol dehydrogenase 1722145..1723158 Salinibacter ruber DSM 13855 3852786 YP_445497.1 CDS SRU_1373 NC_007677.1 1723266 1724492 D identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 1723266..1724492 Salinibacter ruber DSM 13855 3853189 YP_445498.1 CDS SRU_1374 NC_007677.1 1724513 1725064 D hypothetical protein 1724513..1725064 Salinibacter ruber DSM 13855 3851492 YP_445499.1 CDS SRU_1375 NC_007677.1 1725067 1728243 R Zn-dependent aminopeptidase complement(1725067..1728243) Salinibacter ruber DSM 13855 3851824 YP_445500.1 CDS SRU_1376 NC_007677.1 1728316 1728420 D hypothetical protein 1728316..1728420 Salinibacter ruber DSM 13855 3850674 YP_445501.1 CDS SRU_1377 NC_007677.1 1728439 1728741 D identified by match to protein family HMM PF00216; DNA-binding protein HU 1728439..1728741 Salinibacter ruber DSM 13855 3851300 YP_445502.1 CDS SRU_1378 NC_007677.1 1728782 1730095 D hypothetical protein 1728782..1730095 Salinibacter ruber DSM 13855 3850407 YP_445503.1 CDS SRU_1379 NC_007677.1 1730204 1730869 D hypothetical protein 1730204..1730869 Salinibacter ruber DSM 13855 3852360 YP_445504.1 CDS SRU_1380 NC_007677.1 1730905 1731321 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(1730905..1731321) Salinibacter ruber DSM 13855 3851103 YP_445505.1 CDS pilR NC_007677.1 1731355 1732878 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; two-component system regulatory protein complement(1731355..1732878) Salinibacter ruber DSM 13855 3851226 YP_445506.1 CDS SRU_1382 NC_007677.1 1733027 1733437 R identified by match to protein family HMM PF01883; hypothetical protein complement(1733027..1733437) Salinibacter ruber DSM 13855 3851656 YP_445507.1 CDS sufE NC_007677.1 1733579 1734004 R identified by match to protein family HMM PF02657; Fe-S metabolism associated domain-containing protein complement(1733579..1734004) Salinibacter ruber DSM 13855 3853026 YP_445508.1 CDS sufS NC_007677.1 1734084 1735340 R identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; SufS subfamily cysteine desulfurase complement(1734084..1735340) Salinibacter ruber DSM 13855 3853003 YP_445509.1 CDS sufD NC_007677.1 1735419 1736759 R identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD complement(1735419..1736759) Salinibacter ruber DSM 13855 3852190 YP_445510.1 CDS sufC NC_007677.1 1736850 1737620 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC complement(1736850..1737620) Salinibacter ruber DSM 13855 3852943 YP_445511.1 CDS sufB NC_007677.1 1737766 1739277 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(1737766..1739277) Salinibacter ruber DSM 13855 3851769 YP_445512.1 CDS SRU_1388 NC_007677.1 1739568 1739900 D identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; hesB family protein 1739568..1739900 Salinibacter ruber DSM 13855 3851537 YP_445513.1 CDS SRU_1389 NC_007677.1 1740509 1741054 R identified by match to protein family HMM PF02643; hypothetical protein complement(1740509..1741054) Salinibacter ruber DSM 13855 3851206 YP_445514.1 CDS SRU_1390 NC_007677.1 1741051 1741431 R identified by match to protein family HMM PF02643; hypothetical protein complement(1741051..1741431) Salinibacter ruber DSM 13855 3850864 YP_445515.1 CDS SRU_1391 NC_007677.1 1741557 1742108 R identified by match to protein family HMM PF00583; acetyltransferase complement(1741557..1742108) Salinibacter ruber DSM 13855 3852388 YP_445516.1 CDS SRU_1392 NC_007677.1 1742110 1743231 R identified by match to protein family HMM PF06969; oxygen-independent coproporphyrinogen III oxidase complement(1742110..1743231) Salinibacter ruber DSM 13855 3852164 YP_445517.1 CDS SRU_1393 NC_007677.1 1743242 1744324 R hypothetical protein complement(1743242..1744324) Salinibacter ruber DSM 13855 3852617 YP_445518.1 CDS SRU_1394 NC_007677.1 1744369 1745544 D hypothetical protein 1744369..1745544 Salinibacter ruber DSM 13855 3851941 YP_445519.1 CDS SRU_1395 NC_007677.1 1745649 1746830 D identified by match to protein family HMM PF00195; match to protein family HMM PF02797; chalcone synthase 1745649..1746830 Salinibacter ruber DSM 13855 3852219 YP_445520.1 CDS SRU_1396 NC_007677.1 1746862 1749159 R hypothetical protein complement(1746862..1749159) Salinibacter ruber DSM 13855 3851334 YP_445521.1 CDS SRU_1397 NC_007677.1 1749328 1749606 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 1749328..1749606 Salinibacter ruber DSM 13855 3852443 YP_445522.1 CDS SRU_1398 NC_007677.1 1749570 1750046 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 1749570..1750046 Salinibacter ruber DSM 13855 3853171 YP_445523.1 CDS SRU_1399 NC_007677.1 1750568 1751806 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; N-acyl-L-amino acid amidohydrolase complement(1750568..1751806) Salinibacter ruber DSM 13855 3852275 YP_445524.1 CDS SRU_1400 NC_007677.1 1751977 1754136 R hypothetical protein complement(1751977..1754136) Salinibacter ruber DSM 13855 3851805 YP_445525.1 CDS SRU_1401 NC_007677.1 1754149 1755813 R identified by match to protein family HMM PF00082; subtilisin-like serine proteases complement(1754149..1755813) Salinibacter ruber DSM 13855 3852237 YP_445526.1 CDS SRU_1402 NC_007677.1 1755806 1756759 R identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+/Ca+ exchanger-like protein complement(1755806..1756759) Salinibacter ruber DSM 13855 3850689 YP_445527.1 CDS SRU_1403 NC_007677.1 1756967 1758262 R identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein complement(1756967..1758262) Salinibacter ruber DSM 13855 3852422 YP_445528.1 CDS SRU_1404 NC_007677.1 1758409 1758822 R hypothetical protein complement(1758409..1758822) Salinibacter ruber DSM 13855 3851161 YP_445529.1 CDS SRU_1405 NC_007677.1 1759109 1759489 D hypothetical protein 1759109..1759489 Salinibacter ruber DSM 13855 3853120 YP_445530.1 CDS SRU_1406 NC_007677.1 1759624 1759761 R hypothetical protein complement(1759624..1759761) Salinibacter ruber DSM 13855 3852937 YP_445531.1 CDS SRU_1407 NC_007677.1 1759861 1761357 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(1759861..1761357) Salinibacter ruber DSM 13855 3851724 YP_445532.1 CDS SRU_1408 NC_007677.1 1761407 1762612 R HlyD family secretion protein complement(1761407..1762612) Salinibacter ruber DSM 13855 3850833 YP_445533.1 CDS SRU_1409 NC_007677.1 1762796 1765129 R identified by match to protein family HMM PF00005; toxin secretion ABC transporter ATP-binding protein complement(1762796..1765129) Salinibacter ruber DSM 13855 3852915 YP_445534.1 CDS SRU_1410 NC_007677.1 1765462 1767198 R hypothetical protein complement(1765462..1767198) Salinibacter ruber DSM 13855 3852387 YP_445535.1 CDS panC NC_007677.1 1766284 1767171 D identified by match to protein family HMM PF02569; match to protein family HMM TIGR00018; pantoate--beta-alanine ligase 1766284..1767171 Salinibacter ruber DSM 13855 3850341 YP_445536.1 CDS panD NC_007677.1 1767213 1767653 D identified by match to protein family HMM PF02261; match to protein family HMM TIGR00223; aspartate 1-decarboxylase 1767213..1767653 Salinibacter ruber DSM 13855 3852001 YP_445537.1 CDS SRU_1413 NC_007677.1 1767934 1768788 D identified by match to protein family HMM PF00725; match to protein family HMM PF02737; 3-hydroxybutyryl-CoA dehydrogenase 1767934..1768788 Salinibacter ruber DSM 13855 3851588 YP_445538.1 CDS SRU_1414 NC_007677.1 1768902 1769864 R identified by match to protein family HMM PF02562; PhoH family protein complement(1768902..1769864) Salinibacter ruber DSM 13855 3850860 YP_445539.1 CDS dapF NC_007677.1 1769969 1770826 D identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase 1769969..1770826 Salinibacter ruber DSM 13855 3850874 YP_445540.1 CDS SRU_1416 NC_007677.1 1770858 1772933 R identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase complement(1770858..1772933) Salinibacter ruber DSM 13855 3850555 YP_445541.1 CDS SRU_1418 NC_007677.1 1773108 1774094 D identified by match to protein family HMM PF06167; hypothetical protein 1773108..1774094 Salinibacter ruber DSM 13855 3850597 YP_445542.1 CDS SRU_1417 NC_007677.1 1774087 1775328 R hypothetical protein complement(1774087..1775328) Salinibacter ruber DSM 13855 3852542 YP_445543.1 CDS rpmA NC_007677.1 1775432 1775692 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1775432..1775692) Salinibacter ruber DSM 13855 3851726 YP_445544.1 CDS rplU NC_007677.1 1775742 1776260 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(1775742..1776260) Salinibacter ruber DSM 13855 3850852 YP_445545.1 CDS SRU_1421 NC_007677.1 1776285 1776947 D identified by match to protein family HMM PF01557; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1776285..1776947 Salinibacter ruber DSM 13855 3851689 YP_445546.1 CDS SRU_1422 NC_007677.1 1777011 1777616 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 1777011..1777616 Salinibacter ruber DSM 13855 3851238 YP_445547.1 CDS ybjU NC_007677.1 1777644 1778690 R identified by match to protein family HMM PF00155; match to protein family HMM PF01212; L-allo-threonine aldolase complement(1777644..1778690) Salinibacter ruber DSM 13855 3851075 YP_445548.1 CDS greA NC_007677.1 1778729 1779223 R identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA complement(1778729..1779223) Salinibacter ruber DSM 13855 3852406 YP_445549.1 CDS SRU_1425 NC_007677.1 1779399 1780328 R identified by match to protein family HMM PF02016; LD-carboxypeptidase family protein complement(1779399..1780328) Salinibacter ruber DSM 13855 3850634 YP_445550.1 CDS SRU_1426 NC_007677.1 1780373 1780744 R hypothetical protein complement(1780373..1780744) Salinibacter ruber DSM 13855 3853188 YP_445551.1 CDS SRU_1427 NC_007677.1 1780784 1781884 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(1780784..1781884) Salinibacter ruber DSM 13855 3850401 YP_445552.1 CDS SRU_1428 NC_007677.1 1781915 1782577 R hypothetical protein complement(1781915..1782577) Salinibacter ruber DSM 13855 3853140 YP_445553.1 CDS SRU_1429 NC_007677.1 1782546 1783223 R acyltransferase complement(1782546..1783223) Salinibacter ruber DSM 13855 3853175 YP_445554.1 CDS crtB NC_007677.1 1783239 1784162 R identified by match to protein family HMM PF00494; phytoene synthase complement(1783239..1784162) Salinibacter ruber DSM 13855 3852301 YP_445555.1 CDS SRU_1431 NC_007677.1 1784202 1785116 R hypothetical protein complement(1784202..1785116) Salinibacter ruber DSM 13855 3850713 YP_445556.1 CDS SRU_1432 NC_007677.1 1785067 1785948 D hypothetical protein 1785067..1785948 Salinibacter ruber DSM 13855 3851531 YP_445557.1 CDS dcd NC_007677.1 1786047 1786604 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1786047..1786604 Salinibacter ruber DSM 13855 3851991 YP_445558.1 CDS SRU_1434 NC_007677.1 1786613 1786942 D hypothetical protein 1786613..1786942 Salinibacter ruber DSM 13855 3851234 YP_445559.1 CDS SRU_1435 NC_007677.1 1786944 1787882 R identified by match to protein family HMM PF00701; dihydrodipicolinate synthase complement(1786944..1787882) Salinibacter ruber DSM 13855 3851466 YP_445560.1 CDS gufA NC_007677.1 1787966 1788796 R identified by match to protein family HMM PF02535; gufA protein complement(1787966..1788796) Salinibacter ruber DSM 13855 3850645 YP_445561.1 CDS SRU_1437 NC_007677.1 1788947 1789393 D hypothetical protein 1788947..1789393 Salinibacter ruber DSM 13855 3852409 YP_445562.1 CDS SRU_1438 NC_007677.1 1789582 1790127 D hypothetical protein 1789582..1790127 Salinibacter ruber DSM 13855 3850931 YP_445563.1 CDS clpP NC_007677.1 1790222 1790962 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1790222..1790962) Salinibacter ruber DSM 13855 3851308 YP_445564.1 CDS lppC NC_007677.1 1791188 1792120 D identified by match to protein family HMM PF03767; acid phosphatase 1791188..1792120 Salinibacter ruber DSM 13855 3850609 YP_445565.2 CDS SRU_1441 NC_007677.1 1792122 1793813 D contains 3'-5'exonuclease domain; hypothetical protein 1792122..1793813 Salinibacter ruber DSM 13855 3852858 YP_445566.1 CDS ppx NC_007677.1 1794054 1795661 D identified by match to protein family HMM PF01966; match to protein family HMM PF02541; exopolyphosphatase 1794054..1795661 Salinibacter ruber DSM 13855 3852993 YP_445567.1 CDS nuoJ NC_007677.1 1795746 1796369 D identified by match to protein family HMM PF00499; NADH dehydrogenase i, j subunit 1795746..1796369 Salinibacter ruber DSM 13855 3850660 YP_445568.1 CDS nuoK NC_007677.1 1796485 1796790 D identified by match to protein family HMM PF00420; NADH dehydrogenase i, k subunit 1796485..1796790 Salinibacter ruber DSM 13855 3851584 YP_445569.1 CDS nuoL NC_007677.1 1796846 1798843 D identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974; NADH dehydrogenase I subunit L 1796846..1798843 Salinibacter ruber DSM 13855 3851883 YP_445570.1 CDS nuoM NC_007677.1 1798965 1800602 D identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972; NADH dehydrogenase i, m subunit 1798965..1800602 Salinibacter ruber DSM 13855 3850447 YP_445571.1 CDS SRU_1447 NC_007677.1 1800599 1800985 D identified by match to protein family HMM PF01329; pterin-4-alpha-carbinolamine dehydratase 1800599..1800985 Salinibacter ruber DSM 13855 3851239 YP_445572.1 CDS SRU_1448 NC_007677.1 1801071 1802570 D identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770; proton-translocating NADH-quinone oxidoreductase chain N 1801071..1802570 Salinibacter ruber DSM 13855 3852963 YP_445573.1 CDS SRU_1449 NC_007677.1 1802628 1803182 D hypothetical protein 1802628..1803182 Salinibacter ruber DSM 13855 3852782 YP_445574.1 CDS SRU_1450 NC_007677.1 1803212 1804891 R identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199; nitrogen regulatory protein C complement(1803212..1804891) Salinibacter ruber DSM 13855 3853064 YP_445575.1 CDS SRU_1451 NC_007677.1 1804895 1806352 R identified by match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF07568; match to protein family HMM TIGR00229; response regulator complement(1804895..1806352) Salinibacter ruber DSM 13855 3852828 YP_445576.1 CDS SRU_1452 NC_007677.1 1806594 1808201 D hypothetical protein 1806594..1808201 Salinibacter ruber DSM 13855 3851087 YP_445577.1 CDS SRU_1453 NC_007677.1 1808331 1808921 D hypothetical protein 1808331..1808921 Salinibacter ruber DSM 13855 3852714 YP_445578.1 CDS SRU_1454 NC_007677.1 1809113 1810978 D hypothetical protein 1809113..1810978 Salinibacter ruber DSM 13855 3850735 YP_445579.1 CDS SRU_1455 NC_007677.1 1810998 1812947 R identified by match to protein family HMM PF00069; protein kinase domain-containing protein complement(1810998..1812947) Salinibacter ruber DSM 13855 3850427 YP_445580.1 CDS SRU_1456 NC_007677.1 1813040 1814494 R identified by match to protein family HMM PF00171; aldehyde dehydrogenase aldX complement(1813040..1814494) Salinibacter ruber DSM 13855 3851889 YP_445581.1 CDS pncA NC_007677.1 1814673 1815299 D identified by match to protein family HMM PF00857; pyrazinamidase/nicotinamidase 1814673..1815299 Salinibacter ruber DSM 13855 3850419 YP_445582.1 CDS SRU_1458 NC_007677.1 1815335 1816924 R hypothetical protein complement(1815335..1816924) Salinibacter ruber DSM 13855 3852071 YP_445583.1 CDS yfcX NC_007677.1 1816929 1819088 R identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737; fatty oxidation complex subunit alpha complement(1816929..1819088) Salinibacter ruber DSM 13855 3851295 YP_445584.1 CDS hadHB NC_007677.1 1819136 1820518 R identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; fatty oxidation complex subunit beta complement(1819136..1820518) Salinibacter ruber DSM 13855 3850681 YP_445585.1 CDS SRU_1461 NC_007677.1 1820639 1821400 D identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; RNA methyltransferase 1820639..1821400 Salinibacter ruber DSM 13855 3852906 YP_445586.1 CDS SRU_1462 NC_007677.1 1821854 1823803 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 1821854..1823803 Salinibacter ruber DSM 13855 3851368 YP_445587.1 CDS glpA NC_007677.1 1823881 1825455 R identified by match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase complement(1823881..1825455) Salinibacter ruber DSM 13855 3850949 YP_445588.1 CDS SRU_1464 NC_007677.1 1825681 1827141 R hypothetical protein complement(1825681..1827141) Salinibacter ruber DSM 13855 3851380 YP_445589.1 CDS SRU_1465 NC_007677.1 1827126 1828775 R sugar ABC transporter periplasmic sugar-binding protein complement(1827126..1828775) Salinibacter ruber DSM 13855 3851261 YP_445590.1 CDS SRU_1466 NC_007677.1 1829421 1829711 R hypothetical protein complement(1829421..1829711) Salinibacter ruber DSM 13855 3851248 YP_445591.1 CDS SRU_1467 NC_007677.1 1829763 1830557 R identified by match to protein family HMM PF00528; sugar ABC transporter permease complement(1829763..1830557) Salinibacter ruber DSM 13855 3853112 YP_445592.1 CDS SRU_1468 NC_007677.1 1830554 1831420 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1830554..1831420) Salinibacter ruber DSM 13855 3852717 YP_445593.1 CDS SRU_1469 NC_007677.1 1831465 1832583 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1831465..1832583) Salinibacter ruber DSM 13855 3852973 YP_445594.1 CDS SRU_1470 NC_007677.1 1832599 1833714 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1832599..1833714) Salinibacter ruber DSM 13855 3851509 YP_445595.1 CDS glpK NC_007677.1 1833775 1835355 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase complement(1833775..1835355) Salinibacter ruber DSM 13855 3850493 YP_445596.1 CDS SRU_1472 NC_007677.1 1835926 1836711 D identified by match to protein family HMM PF00165; transcriptional regulator 1835926..1836711 Salinibacter ruber DSM 13855 3851870 YP_445597.1 CDS gpsA NC_007677.1 1836791 1837816 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1836791..1837816 Salinibacter ruber DSM 13855 3852470 YP_445598.1 CDS fbp NC_007677.1 1837885 1838955 D identified by match to protein family HMM PF00316; fructose-1,6-bisphosphatase 1837885..1838955 Salinibacter ruber DSM 13855 3850454 YP_445599.1 CDS SRU_1475 NC_007677.1 1839019 1839783 D hypothetical protein 1839019..1839783 Salinibacter ruber DSM 13855 3850479 YP_445600.1 CDS SRU_1476 NC_007677.1 1839811 1840665 D identified by match to protein family HMM PF00378; enoyl-CoA hydratase/isomerase family protein 1839811..1840665 Salinibacter ruber DSM 13855 3852962 YP_445601.1 CDS SRU_1477 NC_007677.1 1840846 1842822 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1840846..1842822 Salinibacter ruber DSM 13855 3852642 YP_445602.1 CDS SRU_1478 NC_007677.1 1842935 1843744 D hypothetical protein 1842935..1843744 Salinibacter ruber DSM 13855 3851112 YP_445603.1 CDS purM NC_007677.1 1843788 1844801 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1843788..1844801 Salinibacter ruber DSM 13855 3852663 YP_445604.1 CDS SRU_1480 NC_007677.1 1844965 1845654 D identified by match to protein family HMM PF02660; match to protein family HMM TIGR00023; membrane protein 1844965..1845654 Salinibacter ruber DSM 13855 3851574 YP_445605.1 CDS gpsA NC_007677.1 1845660 1846814 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1845660..1846814 Salinibacter ruber DSM 13855 3853159 YP_445606.1 CDS SRU_1482 NC_007677.1 1847065 1847580 D hypothetical protein 1847065..1847580 Salinibacter ruber DSM 13855 3851058 YP_445607.1 CDS SRU_1483 NC_007677.1 1847913 1850246 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01061; match to protein family HMM TIGR01062; match to protein family HMM TIGR01063; type II DNA topoisomerase, A subunit 1847913..1850246 Salinibacter ruber DSM 13855 3851827 YP_445608.1 CDS SRU_1484 NC_007677.1 1850303 1852234 D identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; match to protein family HMM TIGR01055; match to protein family HMM TIGR01058; match to protein family HMM TIGR01059; type II DNA topoisomerase, B subunit 1850303..1852234 Salinibacter ruber DSM 13855 3850627 YP_445609.1 CDS SRU_1486 NC_007677.1 1852762 1853130 D hypothetical protein 1852762..1853130 Salinibacter ruber DSM 13855 3851730 YP_445610.1 CDS SRU_1487 NC_007677.1 1853603 1854043 R hypothetical protein complement(1853603..1854043) Salinibacter ruber DSM 13855 3851011 YP_445611.1 CDS SRU_1488 NC_007677.1 1854270 1854656 R hypothetical protein complement(1854270..1854656) Salinibacter ruber DSM 13855 3850461 YP_445612.1 CDS SRU_1489 NC_007677.1 1854852 1855916 R hypothetical protein complement(1854852..1855916) Salinibacter ruber DSM 13855 3852108 YP_445613.1 CDS SRU_1490 NC_007677.1 1856622 1857776 D hypothetical protein 1856622..1857776 Salinibacter ruber DSM 13855 3853147 YP_445614.1 CDS SRU_1491 NC_007677.1 1858832 1859614 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; protein nagD complement(1858832..1859614) Salinibacter ruber DSM 13855 3852175 YP_445615.1 CDS SRU_1492 NC_007677.1 1859688 1860062 R hypothetical protein complement(1859688..1860062) Salinibacter ruber DSM 13855 3852204 YP_445616.1 CDS SRU_1493 NC_007677.1 1860181 1860852 D hypothetical protein 1860181..1860852 Salinibacter ruber DSM 13855 3850582 YP_445617.1 CDS scpB NC_007677.1 1860911 1861657 D identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 1860911..1861657 Salinibacter ruber DSM 13855 3851129 YP_445618.1 CDS rluB NC_007677.1 1861703 1862452 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 1861703..1862452 Salinibacter ruber DSM 13855 3852212 YP_445619.1 CDS guaB NC_007677.1 1862465 1863991 D identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 1862465..1863991 Salinibacter ruber DSM 13855 3850975 YP_445620.1 CDS SRU_1497 NC_007677.1 1864039 1865109 D identified by match to protein family HMM PF00557; aminopeptidase P 1864039..1865109 Salinibacter ruber DSM 13855 3851701 YP_445621.1 CDS SRU_1499 NC_007677.1 1865444 1866586 D hypothetical protein 1865444..1866586 Salinibacter ruber DSM 13855 3851765 YP_445622.1 CDS miaA NC_007677.1 1866556 1867530 R identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1866556..1867530) Salinibacter ruber DSM 13855 3851524 YP_445623.1 CDS SRU_1500 NC_007677.1 1867709 1868530 R identified by match to protein family HMM PF01036; xanthorhodopsin complement(1867709..1868530) Salinibacter ruber DSM 13855 3853028 YP_445624.1 CDS crtY NC_007677.1 1868758 1869513 R identified by similarity to GB:CAB86388.1; licopene beta-cyclase complement(1868758..1869513) Salinibacter ruber DSM 13855 3851044 YP_445625.1 CDS crtO NC_007677.1 1869548 1871080 R identified by similarity to GB:BAC88335.1; match to protein family HMM PF01266; beta-carotene ketolase complement(1869548..1871080) Salinibacter ruber DSM 13855 3851786 YP_445626.1 CDS SRU_1503 NC_007677.1 1871524 1872162 D identified by match to protein family HMM PF04199; cyclase superfamily protein 1871524..1872162 Salinibacter ruber DSM 13855 3852572 YP_445627.1 CDS SRU_1504 NC_007677.1 1872459 1873673 D hypothetical protein 1872459..1873673 Salinibacter ruber DSM 13855 3853099 YP_445628.1 CDS SRU_1505 NC_007677.1 1873808 1874716 D identified by match to protein family HMM PF00589; match to protein family HMM PF02899; phage integrase domain/SAM domain-containing protein 1873808..1874716 Salinibacter ruber DSM 13855 3850761 YP_445629.1 CDS SRU_1506 NC_007677.1 1875379 1876314 D identified by match to protein family HMM PF00589; match to protein family HMM PF02899; tyrosine recombinase XerC 1875379..1876314 Salinibacter ruber DSM 13855 3850507 YP_445630.1 CDS SRU_1507 NC_007677.1 1876321 1877235 R hypothetical protein complement(1876321..1877235) Salinibacter ruber DSM 13855 3851899 YP_445631.1 CDS SRU_1508 NC_007677.1 1877264 1877635 R hypothetical protein complement(1877264..1877635) Salinibacter ruber DSM 13855 3850446 YP_445632.1 CDS SRU_1509 NC_007677.1 1877681 1878709 R identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase complement(1877681..1878709) Salinibacter ruber DSM 13855 3850442 YP_445633.1 CDS SRU_1510 NC_007677.1 1878759 1880126 R identified by match to protein family HMM PF00925; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00505; riboflavin-specific deaminase/GTP cyclohydrolase II complement(1878759..1880126) Salinibacter ruber DSM 13855 3850950 YP_445634.1 CDS SRU_1511 NC_007677.1 1880528 1881343 D hypothetical protein 1880528..1881343 Salinibacter ruber DSM 13855 3852259 YP_445635.1 CDS SRU_1512 NC_007677.1 1881385 1882425 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; HTH-type transcriptional regulator celR 1881385..1882425 Salinibacter ruber DSM 13855 3851860 YP_445636.1 CDS purC NC_007677.1 1882537 1883511 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1882537..1883511 Salinibacter ruber DSM 13855 3851788 YP_445637.1 CDS SRU_1513 NC_007677.1 1883508 1884353 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(1883508..1884353) Salinibacter ruber DSM 13855 3851982 YP_445638.1 CDS SRU_1515 NC_007677.1 1884579 1885079 R identified by match to protein family HMM PF00578; anti-oxidant AhpCTSA family protein complement(1884579..1885079) Salinibacter ruber DSM 13855 3851222 YP_445639.1 CDS SRU_1516 NC_007677.1 1885132 1886490 R identified by match to protein family HMM PF02687; permease complement(1885132..1886490) Salinibacter ruber DSM 13855 3851178 YP_445640.1 CDS pruA NC_007677.1 1886563 1888251 D identified by match to protein family HMM PF00171; match to protein family HMM TIGR01236; 1-pyrroline-5-carboxylate dehydrogenase 1886563..1888251 Salinibacter ruber DSM 13855 3852779 YP_445641.1 CDS SRU_1518 NC_007677.1 1888315 1888785 D hypothetical protein 1888315..1888785 Salinibacter ruber DSM 13855 3851675 YP_445642.1 CDS SRU_1519 NC_007677.1 1888812 1889792 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator protein 1888812..1889792 Salinibacter ruber DSM 13855 3852864 YP_445643.1 CDS SRU_1520 NC_007677.1 1889800 1892427 R identified by match to protein family HMM PF01966; match to protein family HMM PF07698; match to protein family HMM TIGR00277; hypothetical protein complement(1889800..1892427) Salinibacter ruber DSM 13855 3850921 YP_445644.1 CDS SRU_1521 NC_007677.1 1892560 1893735 R hypothetical protein complement(1892560..1893735) Salinibacter ruber DSM 13855 3852192 YP_445645.1 CDS SRU_1523 NC_007677.1 1894245 1895471 R identified by match to protein family HMM PF02566; OsmC-like protein complement(1894245..1895471) Salinibacter ruber DSM 13855 3851028 YP_445646.1 CDS SRU_1524 NC_007677.1 1895506 1896285 R identified by match to protein family HMM PF05742; hypothetical protein complement(1895506..1896285) Salinibacter ruber DSM 13855 3851533 YP_445647.1 CDS SRU_1525 NC_007677.1 1896350 1896928 R identified by match to protein family HMM PF06962; rRNA methylase complement(1896350..1896928) Salinibacter ruber DSM 13855 3851326 YP_445648.1 CDS aroB NC_007677.1 1897074 1898177 D identified by match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 1897074..1898177 Salinibacter ruber DSM 13855 3851486 YP_445649.1 CDS SRU_1527 NC_007677.1 1898388 1903112 D hypothetical protein 1898388..1903112 Salinibacter ruber DSM 13855 3851141 YP_445650.1 CDS rnr NC_007677.1 1903348 1905348 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 1903348..1905348 Salinibacter ruber DSM 13855 3850420 YP_445651.1 CDS SRU_1529 NC_007677.1 1905414 1906748 R identified by match to protein family HMM PF06245; hypothetical protein complement(1905414..1906748) Salinibacter ruber DSM 13855 3852140 YP_445652.1 CDS SRU_1530 NC_007677.1 1907187 1907942 R identified by match to protein family HMM PF01569; PAP2 superfamily protein complement(1907187..1907942) Salinibacter ruber DSM 13855 3852177 YP_445653.1 CDS recA NC_007677.1 1907949 1909010 R identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; recA protein complement(1907949..1909010) Salinibacter ruber DSM 13855 3852685 YP_445654.1 CDS SRU_1532 NC_007677.1 1909231 1909962 R hypothetical protein complement(1909231..1909962) Salinibacter ruber DSM 13855 3852591 YP_445655.1 CDS SRU_1533 NC_007677.1 1910382 1911173 D hypothetical protein 1910382..1911173 Salinibacter ruber DSM 13855 3852628 YP_445656.1 CDS SRU_1534 NC_007677.1 1911109 1913289 D hypothetical protein 1911109..1913289 Salinibacter ruber DSM 13855 3850378 YP_445657.1 CDS SRU_1535 NC_007677.1 1913339 1913878 D identified by match to protein family HMM PF00072; response regulator 1913339..1913878 Salinibacter ruber DSM 13855 3850718 YP_445658.1 CDS SRU_1536 NC_007677.1 1913970 1914512 R hypothetical protein complement(1913970..1914512) Salinibacter ruber DSM 13855 3853011 YP_445659.1 CDS SRU_1537 NC_007677.1 1914840 1915400 D hypothetical protein 1914840..1915400 Salinibacter ruber DSM 13855 3853149 YP_445660.1 CDS SRU_1538 NC_007677.1 1915893 1916843 D identified by match to protein family HMM PF03009; glycerophosphodiester phosphodiesterase 1915893..1916843 Salinibacter ruber DSM 13855 3852557 YP_445661.1 CDS SRU_1539 NC_007677.1 1916857 1917978 R identified by match to protein family HMM PF00817; DNA polymerase IV complement(1916857..1917978) Salinibacter ruber DSM 13855 3850475 YP_445662.1 CDS SRU_1540 NC_007677.1 1918501 1919397 R hypothetical protein complement(1918501..1919397) Salinibacter ruber DSM 13855 3850504 YP_445663.1 CDS SRU_1541 NC_007677.1 1920243 1920893 D hypothetical protein 1920243..1920893 Salinibacter ruber DSM 13855 3852312 YP_445664.1 CDS SRU_1542 NC_007677.1 1921112 1922560 R hypothetical protein complement(1921112..1922560) Salinibacter ruber DSM 13855 3852503 YP_445665.1 CDS alaS NC_007677.1 1923136 1926036 R identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanyl-tRNA synthetase complement(1923136..1926036) Salinibacter ruber DSM 13855 3851086 YP_445666.1 CDS SRU_1545 NC_007677.1 1926298 1926918 R identified by similarity to SP:Q39147; match to protein family HMM PF02245; match to protein family HMM TIGR00567; DNA-3-methyladenine glycosylase complement(1926298..1926918) Salinibacter ruber DSM 13855 3851358 YP_445667.1 CDS SRU_1546 NC_007677.1 1926998 1927939 D hypothetical protein 1926998..1927939 Salinibacter ruber DSM 13855 3850737 YP_445668.1 CDS SRU_1547 NC_007677.1 1927960 1929150 R identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase complement(1927960..1929150) Salinibacter ruber DSM 13855 3851417 YP_445669.1 CDS SRU_1548 NC_007677.1 1929208 1931313 R identified by match to protein family HMM PF03190; hypothetical protein complement(1929208..1931313) Salinibacter ruber DSM 13855 3852675 YP_445670.1 CDS SRU_1549 NC_007677.1 1931366 1934089 R identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein complement(1931366..1934089) Salinibacter ruber DSM 13855 3852861 YP_445671.1 CDS SRU_1550 NC_007677.1 1934090 1935508 R identified by match to protein family HMM PF05161; hydroxypyruvate reductase complement(1934090..1935508) Salinibacter ruber DSM 13855 3851127 YP_445672.1 CDS SRU_1551 NC_007677.1 1935430 1936722 D hypothetical protein 1935430..1936722 Salinibacter ruber DSM 13855 3850978 YP_445673.1 CDS thiE NC_007677.1 1936836 1937519 D identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 1936836..1937519 Salinibacter ruber DSM 13855 3851530 YP_445674.1 CDS hemD NC_007677.1 1937521 1938309 R identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase complement(1937521..1938309) Salinibacter ruber DSM 13855 3851890 YP_445675.1 CDS hemC NC_007677.1 1938310 1939281 R identified by match to protein family HMM PF01379; match to protein family HMM PF03900; match to protein family HMM TIGR00212; porphobilinogen deaminase complement(1938310..1939281) Salinibacter ruber DSM 13855 3851590 YP_445676.1 CDS hemA NC_007677.1 1939392 1940852 R identified by match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035; glutamyl-tRNA reductase complement(1939392..1940852) Salinibacter ruber DSM 13855 3851349 YP_445677.1 CDS mtnN NC_007677.1 1940918 1941748 R identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase complement(1940918..1941748) Salinibacter ruber DSM 13855 3852240 YP_445678.1 CDS metG NC_007677.1 1942288 1944429 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(1942288..1944429) Salinibacter ruber DSM 13855 3851195 YP_445679.1 CDS SRU_1558 NC_007677.1 1944602 1945081 R hypothetical protein complement(1944602..1945081) Salinibacter ruber DSM 13855 3851381 YP_445680.1 CDS hisB NC_007677.1 1945096 1945704 D identified by match to protein family HMM PF00475; imidazoleglycerol-phosphate dehydratase 1945096..1945704 Salinibacter ruber DSM 13855 3852622 YP_445681.1 CDS proC NC_007677.1 1945831 1946649 D identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 1945831..1946649 Salinibacter ruber DSM 13855 3852492 YP_445682.1 CDS hisH NC_007677.1 1946733 1947389 D identified by match to protein family HMM PF00117; match to protein family HMM PF07685; match to protein family HMM TIGR01855; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1946733..1947389 Salinibacter ruber DSM 13855 3851208 YP_445683.1 CDS SRU_1562 NC_007677.1 1947429 1947557 R hypothetical protein complement(1947429..1947557) Salinibacter ruber DSM 13855 3852504 YP_445684.1 CDS SRU_1563 NC_007677.1 1947777 1948268 R identified by match to protein family HMM PF00313; cold shock-like protein cspG complement(1947777..1948268) Salinibacter ruber DSM 13855 3850937 YP_445685.1 CDS hisA NC_007677.1 1948281 1949057 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1948281..1949057 Salinibacter ruber DSM 13855 3851365 YP_445686.1 CDS hisF NC_007677.1 1949098 1949904 D identified by match to protein family HMM PF00977; match to protein family HMM TIGR00735; Imidazole glycerol phosphate synthase cyclase subunit 1949098..1949904 Salinibacter ruber DSM 13855 3852751 YP_445687.1 CDS SRU_1566 NC_007677.1 1949954 1950211 D ABC transporter permease 1949954..1950211 Salinibacter ruber DSM 13855 3851978 YP_445688.1 CDS SRU_1567 NC_007677.1 1950215 1950730 R hypothetical protein complement(1950215..1950730) Salinibacter ruber DSM 13855 3851158 YP_445689.1 CDS SRU_1568 NC_007677.1 1950792 1951331 D identified by match to protein family HMM PF02834; match to protein family HMM TIGR02258; 2'-5' RNA ligase 1950792..1951331 Salinibacter ruber DSM 13855 3851465 YP_445690.1 CDS SRU_1569 NC_007677.1 1951443 1952084 D identified by match to protein family HMM PF03548; Outer membrane lipoprotein carrier protein LolA 1951443..1952084 Salinibacter ruber DSM 13855 3851384 YP_445691.1 CDS SRU_1570 NC_007677.1 1952143 1953333 D identified by match to protein family HMM TIGR00374; hypothetical protein 1952143..1953333 Salinibacter ruber DSM 13855 3851041 YP_445692.1 CDS mdh NC_007677.1 1953448 1954392 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01763; malate dehydrogenase 1953448..1954392 Salinibacter ruber DSM 13855 3850691 YP_445693.1 CDS SRU_1572 NC_007677.1 1954435 1955409 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein complement(1954435..1955409) Salinibacter ruber DSM 13855 3851564 YP_445694.1 CDS SRU_1573 NC_007677.1 1955355 1956674 D identified by match to protein family HMM PF00561; match to protein family HMM PF00903; glyoxalase family protein 1955355..1956674 Salinibacter ruber DSM 13855 3851440 YP_445695.1 CDS SRU_1574 NC_007677.1 1956716 1957717 D identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase 1956716..1957717 Salinibacter ruber DSM 13855 3850697 YP_445696.1 CDS SRU_1575 NC_007677.1 1957677 1958258 D hypothetical protein 1957677..1958258 Salinibacter ruber DSM 13855 3851592 YP_445697.1 CDS msrA NC_007677.1 1958446 1959138 D identified by similarity to SP:Q93P63; match to protein family HMM PF01625; match to protein family HMM TIGR00401; methionine-S-sulfoxide reductase 1958446..1959138 Salinibacter ruber DSM 13855 3851803 YP_445698.1 CDS SRU_1577 NC_007677.1 1959632 1961173 D identified by match to protein family HMM PF03806; transporter 1959632..1961173 Salinibacter ruber DSM 13855 3851049 YP_445699.1 CDS SRU_1578 NC_007677.1 1961188 1961610 R identified by match to protein family HMM PF01850; twitching mobility protein PilT complement(1961188..1961610) Salinibacter ruber DSM 13855 3850525 YP_445700.1 CDS SRU_1579 NC_007677.1 1961617 1961877 R hypothetical protein complement(1961617..1961877) Salinibacter ruber DSM 13855 3853173 YP_445701.1 CDS uvrC NC_007677.1 1962016 1963917 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1962016..1963917 Salinibacter ruber DSM 13855 3851225 YP_445702.1 CDS SRU_1581 NC_007677.1 1964053 1964385 D hypothetical protein 1964053..1964385 Salinibacter ruber DSM 13855 3852477 YP_445703.1 CDS SRU_1582 NC_007677.1 1965323 1966141 R hypothetical protein complement(1965323..1966141) Salinibacter ruber DSM 13855 3852429 YP_445704.1 CDS SRU_1583 NC_007677.1 1966158 1966394 R hypothetical protein complement(1966158..1966394) Salinibacter ruber DSM 13855 3852457 YP_445705.1 CDS SRU_1584 NC_007677.1 1966434 1969628 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1966434..1969628 Salinibacter ruber DSM 13855 3850396 YP_445706.1 CDS SRU_1585 NC_007677.1 1969685 1971412 D hypothetical protein 1969685..1971412 Salinibacter ruber DSM 13855 3851686 YP_445707.1 CDS SRU_1586 NC_007677.1 1971844 1972602 D hypothetical protein 1971844..1972602 Salinibacter ruber DSM 13855 3852300 YP_445708.1 CDS SRU_1587 NC_007677.1 1972678 1973370 D identified by match to protein family HMM PF01618; biopolymer transport protein 1972678..1973370 Salinibacter ruber DSM 13855 3852602 YP_445709.1 CDS SRU_1588 NC_007677.1 1973418 1973825 D identified by match to protein family HMM PF02472; ExbD/TolR family protein 1973418..1973825 Salinibacter ruber DSM 13855 3851648 YP_445710.1 CDS SRU_1589 NC_007677.1 1974047 1975597 R identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368; Mg chelatase-like protein complement(1974047..1975597) Salinibacter ruber DSM 13855 3850505 YP_445711.1 CDS SRU_1590 NC_007677.1 1976222 1976791 R identified by match to protein family HMM PF00127; match to protein family HMM TIGR01409; auracyanin A complement(1976222..1976791) Salinibacter ruber DSM 13855 3850354 YP_445712.1 CDS SRU_1591 NC_007677.1 1977161 1977979 D hypothetical protein 1977161..1977979 Salinibacter ruber DSM 13855 3851951 YP_445713.1 CDS SRU_1592 NC_007677.1 1978218 1978979 R identified by match to protein family HMM PF01209; menaquinone biosynthesis methyltransferase ubiE complement(1978218..1978979) Salinibacter ruber DSM 13855 3850881 YP_445714.1 CDS SRU_1593 NC_007677.1 1978995 1979687 R hypothetical protein complement(1978995..1979687) Salinibacter ruber DSM 13855 3850935 YP_445715.1 CDS SRU_1594 NC_007677.1 1979647 1982268 R identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; cation-transporting ATPase pacS complement(1979647..1982268) Salinibacter ruber DSM 13855 3851078 YP_445716.1 CDS SRU_1595 NC_007677.1 1982392 1982880 D hypothetical protein 1982392..1982880 Salinibacter ruber DSM 13855 3851122 YP_445717.1 CDS SRU_1596 NC_007677.1 1983798 1984955 D identified by match to protein family HMM PF01266; match to protein family HMM PF01494; FAD dependent oxidoreductase 1983798..1984955 Salinibacter ruber DSM 13855 3850712 YP_445718.1 CDS SRU_1597 NC_007677.1 1985006 1985998 R identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; SUA5 protein complement(1985006..1985998) Salinibacter ruber DSM 13855 3852298 YP_445719.1 CDS SRU_1598 NC_007677.1 1986077 1986541 D identified by match to protein family HMM PF06803; hypothetical protein 1986077..1986541 Salinibacter ruber DSM 13855 3851837 YP_445720.1 CDS SRU_1599 NC_007677.1 1987073 1988890 R identified by match to protein family HMM PF00571; hypothetical protein complement(1987073..1988890) Salinibacter ruber DSM 13855 3851014 YP_445721.1 CDS SRU_1600 NC_007677.1 1989045 1991042 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 1989045..1991042 Salinibacter ruber DSM 13855 3851684 YP_445722.1 CDS SRU_1601 NC_007677.1 1991107 1991898 D hypothetical protein 1991107..1991898 Salinibacter ruber DSM 13855 3850418 YP_445723.1 CDS SRU_1602 NC_007677.1 1991958 1993196 D identified by match to protein family HMM PF01551; M23 peptidase domain-containing protein 1991958..1993196 Salinibacter ruber DSM 13855 3852871 YP_445724.1 CDS lpdA NC_007677.1 1993285 1994754 D identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350; dihydrolipoamide dehydrogenase 1993285..1994754 Salinibacter ruber DSM 13855 3853167 YP_445725.1 CDS SRU_1604 NC_007677.1 1995378 1997027 R identified by match to protein family HMM PF01433; aminopeptidase M1 family protein complement(1995378..1997027) Salinibacter ruber DSM 13855 3851061 YP_445726.1 CDS SRU_1605 NC_007677.1 1997084 1997635 R identified by match to protein family HMM PF00226; DnaJ-like subfamily B protein complement(1997084..1997635) Salinibacter ruber DSM 13855 3851677 YP_445727.1 CDS mutS NC_007677.1 1997723 2000449 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1997723..2000449) Salinibacter ruber DSM 13855 3852165 YP_445728.1 CDS SRU_1607 NC_007677.1 2000664 2001965 R identified by match to protein family HMM PF00226; DnaJ domain-containing protein complement(2000664..2001965) Salinibacter ruber DSM 13855 3850719 YP_445729.1 CDS SRU_1608 NC_007677.1 2001952 2002641 R hypothetical protein complement(2001952..2002641) Salinibacter ruber DSM 13855 3851741 YP_445730.1 CDS SRU_1609 NC_007677.1 2003019 2003810 D identified by match to protein family HMM PF01513; ATP-NAD kinase 2003019..2003810 Salinibacter ruber DSM 13855 3851661 YP_445731.2 CDS fumC NC_007677.1 2004285 2005691 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2004285..2005691 Salinibacter ruber DSM 13855 3852985 YP_445732.1 CDS htrA NC_007677.1 2006031 2007482 D identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease 2006031..2007482 Salinibacter ruber DSM 13855 3853000 YP_445733.1 CDS SRU_1613 NC_007677.1 2007546 2007836 D hypothetical protein 2007546..2007836 Salinibacter ruber DSM 13855 3852695 YP_445734.1 CDS gldA NC_007677.1 2008079 2009173 D forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2008079..2009173 Salinibacter ruber DSM 13855 3852527 YP_445735.1 CDS SRU_1615 NC_007677.1 2009433 2009975 R hypothetical protein complement(2009433..2009975) Salinibacter ruber DSM 13855 3851744 YP_445736.1 CDS tyrA NC_007677.1 2010058 2011203 D identified by match to protein family HMM PF01842; match to protein family HMM PF02153; match to protein family HMM PF03807; prephenate dehydrogenase 2010058..2011203 Salinibacter ruber DSM 13855 3852616 YP_445737.1 CDS gcvT NC_007677.1 2011330 2012454 D identified by match to protein family HMM PF01571; match to protein family HMM TIGR00528; glycine cleavage system T protein 2011330..2012454 Salinibacter ruber DSM 13855 3852980 YP_445738.1 CDS SRU_1618 NC_007677.1 2012526 2013245 D identified by match to protein family HMM PF04029; hypothetical protein 2012526..2013245 Salinibacter ruber DSM 13855 3853183 YP_445739.1 CDS ftsK NC_007677.1 2013502 2016165 D identified by match to protein family HMM PF01580; ftsk/SpoIIIE family protein 2013502..2016165 Salinibacter ruber DSM 13855 3850694 YP_445740.1 CDS purK NC_007677.1 2016238 2017377 D identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 2016238..2017377 Salinibacter ruber DSM 13855 3852912 YP_445741.1 CDS purE NC_007677.1 2017516 2018028 D identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 2017516..2018028 Salinibacter ruber DSM 13855 3851352 YP_445742.1 CDS SRU_1622 NC_007677.1 2018100 2020133 D identified by match to protein family HMM PF00041; lysyl endopeptidase 2018100..2020133 Salinibacter ruber DSM 13855 3853017 YP_445743.1 CDS tyrS NC_007677.1 2020196 2021434 R identified by match to protein family HMM PF00579; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase complement(2020196..2021434) Salinibacter ruber DSM 13855 3852632 YP_445744.1 CDS smpB NC_007677.1 2021495 2021959 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(2021495..2021959) Salinibacter ruber DSM 13855 3850746 YP_445745.1 CDS SRU_1625 NC_007677.1 2022129 2022944 R hypothetical protein complement(2022129..2022944) Salinibacter ruber DSM 13855 3850717 YP_445746.1 CDS rplS NC_007677.1 2023011 2023367 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2023011..2023367) Salinibacter ruber DSM 13855 3850608 YP_445747.1 CDS trmD NC_007677.1 2023429 2024154 R identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1)-methyltransferase complement(2023429..2024154) Salinibacter ruber DSM 13855 3850933 YP_445748.1 CDS rimM NC_007677.1 2024200 2024796 R identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM complement(2024200..2024796) Salinibacter ruber DSM 13855 3852790 YP_445749.1 CDS rpsP NC_007677.1 2024826 2025443 R identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 complement(2024826..2025443) Salinibacter ruber DSM 13855 3851680 YP_445750.1 CDS ffh NC_007677.1 2025515 2026900 R identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(2025515..2026900) Salinibacter ruber DSM 13855 3853096 YP_445751.1 CDS SRU_1631 NC_007677.1 2027252 2027839 D identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 2027252..2027839 Salinibacter ruber DSM 13855 3850992 YP_445752.1 CDS SRU_1632 NC_007677.1 2027883 2028554 D identified by match to protein family HMM PF04024; PspC domain-containing protein 2027883..2028554 Salinibacter ruber DSM 13855 3851598 YP_445753.1 CDS SRU_1633 NC_007677.1 2028566 2029747 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein complement(2028566..2029747) Salinibacter ruber DSM 13855 3850966 YP_445754.1 CDS SRU_1634 NC_007677.1 2029968 2031398 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; protease complement(2029968..2031398) Salinibacter ruber DSM 13855 3850436 YP_445755.1 CDS polA NC_007677.1 2031404 2034184 R identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA polymerase I complement(2031404..2034184) Salinibacter ruber DSM 13855 3850408 YP_445756.1 CDS SRU_1636 NC_007677.1 2034444 2035121 D identified by match to protein family HMM PF00702; HAD superfamily hydrolase 2034444..2035121 Salinibacter ruber DSM 13855 3853090 YP_445757.1 CDS SRU_1637 NC_007677.1 2035196 2037910 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; PAS domain-containing protein complement(2035196..2037910) Salinibacter ruber DSM 13855 3851614 YP_445758.1 CDS purN NC_007677.1 2038685 2039338 D identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 2038685..2039338 Salinibacter ruber DSM 13855 3852807 YP_445759.1 CDS purH NC_007677.1 2039358 2040944 D identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355; bifunctional purine biosynthesis protein PurH 2039358..2040944 Salinibacter ruber DSM 13855 3852615 YP_445760.1 CDS SRU_1640 NC_007677.1 2041111 2042118 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2041111..2042118 Salinibacter ruber DSM 13855 3852147 YP_445761.1 CDS SRU_1641 NC_007677.1 2042243 2042995 D identified by match to protein family HMM PF04085; cell shape-determining protein MreC 2042243..2042995 Salinibacter ruber DSM 13855 3852745 YP_445762.1 CDS SRU_1642 NC_007677.1 2043142 2043783 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2043142..2043783 Salinibacter ruber DSM 13855 3851897 YP_445763.1 CDS SRU_1643 NC_007677.1 2043890 2044999 D hypothetical protein 2043890..2044999 Salinibacter ruber DSM 13855 3850780 YP_445764.1 CDS hslU NC_007677.1 2045059 2046504 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 2045059..2046504 Salinibacter ruber DSM 13855 3851755 YP_445765.1 CDS SRU_1645 NC_007677.1 2046526 2046891 D phosphoribosylaminoimidazole carboxylase ATPase subunit 2046526..2046891 Salinibacter ruber DSM 13855 3852909 YP_445766.1 CDS SRU_1646 NC_007677.1 2046927 2047829 R hypothetical protein complement(2046927..2047829) Salinibacter ruber DSM 13855 3850647 YP_445767.1 CDS paaY NC_007677.1 2047881 2048537 R identified by match to protein family HMM PF00132; carbonic anhydrase complement(2047881..2048537) Salinibacter ruber DSM 13855 3853196 YP_445768.1 CDS SRU_1648 NC_007677.1 2048509 2049567 D identified by match to protein family HMM PF01594; hypothetical protein 2048509..2049567 Salinibacter ruber DSM 13855 3852707 YP_445769.1 CDS SRU_1650 NC_007677.1 2049795 2050766 R identified by match to protein family HMM PF00597; DedA family protein complement(2049795..2050766) Salinibacter ruber DSM 13855 3852518 YP_445770.1 CDS ispF NC_007677.1 2050493 2050966 R identified by match to protein family HMM PF02542; match to protein family HMM TIGR00151; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase complement(2050493..2050966) Salinibacter ruber DSM 13855 3851240 YP_445771.1 CDS SRU_1652 NC_007677.1 2050995 2051711 R identified by match to protein family HMM PF01128; hypothetical protein complement(2050995..2051711) Salinibacter ruber DSM 13855 3851264 YP_445772.1 CDS SRU_1653 NC_007677.1 2051801 2052850 R identified by match to protein family HMM PF02547; queuosine biosynthesis protein complement(2051801..2052850) Salinibacter ruber DSM 13855 3850755 YP_445773.1 CDS SRU_1654 NC_007677.1 2053016 2053972 R hypothetical protein complement(2053016..2053972) Salinibacter ruber DSM 13855 3851563 YP_445774.1 CDS SRU_1655 NC_007677.1 2054038 2055828 R identified by match to protein family HMM PF01425; match to protein family HMM TIGR01409; glutamyl-tRNA(Gln) amidotransferase subunit A complement(2054038..2055828) Salinibacter ruber DSM 13855 3852577 YP_445775.1 CDS SRU_1656 NC_007677.1 2056324 2056926 R hypothetical protein complement(2056324..2056926) Salinibacter ruber DSM 13855 3850416 YP_445776.1 CDS ylnA NC_007677.1 2056975 2058228 R identified by match to protein family HMM PF01384; anion permease complement(2056975..2058228) Salinibacter ruber DSM 13855 3852866 YP_445777.1 CDS prfC NC_007677.1 2058480 2060081 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(2058480..2060081) Salinibacter ruber DSM 13855 3850618 YP_445778.1 CDS SRU_1659 NC_007677.1 2060815 2062089 R hypothetical protein complement(2060815..2062089) Salinibacter ruber DSM 13855 3851027 YP_445779.1 CDS SRU_1660 NC_007677.1 2062143 2062988 R identified by match to protein family HMM PF02698; hypothetical protein complement(2062143..2062988) Salinibacter ruber DSM 13855 3851494 YP_445780.1 CDS SRU_1661 NC_007677.1 2063371 2064609 R identified by match to protein family HMM PF01323; match to protein family HMM PF07884; vitamin K epoxide reductase family protein complement(2063371..2064609) Salinibacter ruber DSM 13855 3852783 YP_445781.1 CDS trpE NC_007677.1 2064907 2066478 D identified by match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564; anthranilate synthase component I 2064907..2066478 Salinibacter ruber DSM 13855 3851105 YP_445782.1 CDS SRU_1663 NC_007677.1 2066587 2067066 D hypothetical protein 2066587..2067066 Salinibacter ruber DSM 13855 3851324 YP_445783.1 CDS trpS NC_007677.1 2067116 2068150 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2067116..2068150 Salinibacter ruber DSM 13855 3851337 YP_445784.1 CDS SRU_1665 NC_007677.1 2068274 2068876 D identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II 2068274..2068876 Salinibacter ruber DSM 13855 3851865 YP_445785.1 CDS trpD NC_007677.1 2068922 2069956 D identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR01245; anthranilate phosphoribosyltransferase 2068922..2069956 Salinibacter ruber DSM 13855 3852785 YP_445786.1 CDS trpC NC_007677.1 2070017 2070829 D identified by match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 2070017..2070829 Salinibacter ruber DSM 13855 3851367 YP_445787.1 CDS trpF NC_007677.1 2070900 2071565 D identified by match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 2070900..2071565 Salinibacter ruber DSM 13855 3852055 YP_445788.1 CDS trpB NC_007677.1 2071644 2072864 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2071644..2072864 Salinibacter ruber DSM 13855 3850444 YP_445789.1 CDS trpA NC_007677.1 2072917 2073753 D identified by match to protein family HMM PF00290; match to protein family HMM TIGR00262; tryptophan synthase subunit alpha 2072917..2073753 Salinibacter ruber DSM 13855 3852941 YP_445790.1 CDS SRU_1671 NC_007677.1 2073878 2075026 D hypothetical protein 2073878..2075026 Salinibacter ruber DSM 13855 3852438 YP_445791.1 CDS SRU_1672 NC_007677.1 2075026 2075451 D hypothetical protein 2075026..2075451 Salinibacter ruber DSM 13855 3851026 YP_445792.1 CDS SRU_1673 NC_007677.1 2075466 2077415 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ complement(2075466..2077415) Salinibacter ruber DSM 13855 3853002 YP_445793.1 CDS SRU_1675 NC_007677.1 2077395 2078570 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 2077395..2078570 Salinibacter ruber DSM 13855 3851023 YP_445794.1 CDS SRU_1674 NC_007677.1 2078538 2079482 R identified by match to protein family HMM PF00892; hypothetical protein complement(2078538..2079482) Salinibacter ruber DSM 13855 3852897 YP_445795.1 CDS SRU_1676 NC_007677.1 2079507 2079932 R hypothetical protein complement(2079507..2079932) Salinibacter ruber DSM 13855 3853200 YP_445796.1 CDS SRU_1677 NC_007677.1 2079955 2080977 R identified by match to protein family HMM PF00180; (NAD+) isocitrate dehydrogenase complement(2079955..2080977) Salinibacter ruber DSM 13855 3851475 YP_445797.1 CDS SRU_1678 NC_007677.1 2081129 2081590 R hypothetical protein complement(2081129..2081590) Salinibacter ruber DSM 13855 3851094 YP_445798.1 CDS SRU_1679 NC_007677.1 2081655 2082263 R hypothetical protein complement(2081655..2082263) Salinibacter ruber DSM 13855 3851974 YP_445799.1 CDS SRU_1680 NC_007677.1 2082318 2082599 R hypothetical protein complement(2082318..2082599) Salinibacter ruber DSM 13855 3852706 YP_445800.1 CDS SRU_1681 NC_007677.1 2082702 2083430 R identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein complement(2082702..2083430) Salinibacter ruber DSM 13855 3851267 YP_445801.1 CDS SRU_1682 NC_007677.1 2083984 2085714 D identified by match to protein family HMM PF02811; phosphotransferase domain-containing protein 2083984..2085714 Salinibacter ruber DSM 13855 3850628 YP_445802.1 CDS SRU_1683 NC_007677.1 2085753 2087720 D penicillin amidase superfamily protein 2085753..2087720 Salinibacter ruber DSM 13855 3852727 YP_445803.1 CDS acs NC_007677.1 2087745 2089736 R identified by match to protein family HMM PF00501; acetyl-CoA synthase complement(2087745..2089736) Salinibacter ruber DSM 13855 3851639 YP_445804.1 CDS SRU_1685 NC_007677.1 2089860 2091707 R identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553; chorismate binding protein complement(2089860..2091707) Salinibacter ruber DSM 13855 3852107 YP_445805.1 CDS SRU_1686 NC_007677.1 2091846 2092868 R identified by match to protein family HMM PF00107; oxidoreductase, zinc-binding dehydrogenase family protein complement(2091846..2092868) Salinibacter ruber DSM 13855 3851082 YP_445806.1 CDS SRU_1687 NC_007677.1 2093158 2094309 D identified by match to protein family HMM PF00724; oxidoreductase, FMN-binding 2093158..2094309 Salinibacter ruber DSM 13855 3850952 YP_445807.1 CDS SRU_1688 NC_007677.1 2094354 2095127 D identified by match to protein family HMM PF02678; hypothetical protein 2094354..2095127 Salinibacter ruber DSM 13855 3852988 YP_445808.1 CDS SRU_1689 NC_007677.1 2095527 2098835 R identified by match to protein family HMM PF01642; match to protein family HMM PF03308; methylmalonyll-CoA mutase complement(2095527..2098835) Salinibacter ruber DSM 13855 3852321 YP_445809.1 CDS SRU_1690 NC_007677.1 2099074 2100138 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase family protein 2099074..2100138 Salinibacter ruber DSM 13855 3851753 YP_445810.1 CDS SRU_1691 NC_007677.1 2100194 2100721 R identified by match to protein family HMM PF01899; Na(+)/H(+) ion antiporter subunit family protein complement(2100194..2100721) Salinibacter ruber DSM 13855 3850857 YP_445811.1 CDS SRU_1692 NC_007677.1 2100648 2102216 R identified by match to protein family HMM PF00361; NADH-ubiquinone/plastoquinone complex I protein complement(2100648..2102216) Salinibacter ruber DSM 13855 3852535 YP_445812.1 CDS SRU_1693 NC_007677.1 2102260 2102616 R identified by match to protein family HMM PF00420; cation transport system protein complement(2102260..2102616) Salinibacter ruber DSM 13855 3852278 YP_445813.1 CDS SRU_1694 NC_007677.1 2102662 2103096 R subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B complement(2102662..2103096) Salinibacter ruber DSM 13855 3852609 YP_445814.1 CDS SRU_1695 NC_007677.1 2103093 2105477 R subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A complement(2103093..2105477) Salinibacter ruber DSM 13855 3851757 YP_445815.1 CDS SRU_1696 NC_007677.1 2105543 2105947 R identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300; MnhG/PhaG subunit subfamily monovalent cation/proton antiporter complement(2105543..2105947) Salinibacter ruber DSM 13855 3853035 YP_445816.1 CDS SRU_1697 NC_007677.1 2105990 2106301 R identified by match to protein family HMM PF04066; pH adaptation potassium efflux system phaF complement(2105990..2106301) Salinibacter ruber DSM 13855 3852687 YP_445817.1 CDS SRU_1698 NC_007677.1 2106513 2106875 D hypothetical protein 2106513..2106875 Salinibacter ruber DSM 13855 3850834 YP_445818.1 CDS SRU_1699 NC_007677.1 2106958 2107518 D hypothetical protein 2106958..2107518 Salinibacter ruber DSM 13855 3850521 YP_445819.1 CDS SRU_1700 NC_007677.1 2107578 2107925 D hypothetical protein 2107578..2107925 Salinibacter ruber DSM 13855 3852248 YP_445820.1 CDS SRU_1701 NC_007677.1 2108315 2110675 R identified by match to protein family HMM PF00441; match to protein family HMM PF01756; match to protein family HMM PF02770; acyl-coenzyme A oxidase I complement(2108315..2110675) Salinibacter ruber DSM 13855 3851887 YP_445821.1 CDS hemE NC_007677.1 2110687 2111751 R identified by match to protein family HMM PF01208; match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase complement(2110687..2111751) Salinibacter ruber DSM 13855 3850959 YP_445822.1 CDS SRU_1703 NC_007677.1 2111842 2112855 R identified by match to protein family HMM PF01738; dienelactone hydrolase family protein complement(2111842..2112855) Salinibacter ruber DSM 13855 3851360 YP_445823.1 CDS cdsA NC_007677.1 2112914 2113567 D identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 2112914..2113567 Salinibacter ruber DSM 13855 3851613 YP_445824.1 CDS SRU_1705 NC_007677.1 2113509 2114519 D lipase 2113509..2114519 Salinibacter ruber DSM 13855 3852417 YP_445825.1 CDS SRU_1706 NC_007677.1 2114594 2115907 D identified by match to protein family HMM PF01966; HD domain-containing protein 2114594..2115907 Salinibacter ruber DSM 13855 3852003 YP_445826.1 CDS SRU_1707 NC_007677.1 2116164 2116718 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; ECF-subfamily sigma factor 2116164..2116718 Salinibacter ruber DSM 13855 3851597 YP_445827.1 CDS tnaA NC_007677.1 2116819 2118234 D tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 2116819..2118234 Salinibacter ruber DSM 13855 3850539 YP_445828.1 CDS ansA NC_007677.1 2118242 2119330 R identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519; L-asparaginase complement(2118242..2119330) Salinibacter ruber DSM 13855 3850736 YP_445829.1 CDS hpt NC_007677.1 2119475 2120074 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase complement(2119475..2120074) Salinibacter ruber DSM 13855 3851428 YP_445830.1 CDS tilS NC_007677.1 2120137 2121543 R identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase complement(2120137..2121543) Salinibacter ruber DSM 13855 3851806 YP_445831.1 CDS mutL NC_007677.1 2121575 2123518 R identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM TIGR00585; DNA mismatch repair protein MutL complement(2121575..2123518) Salinibacter ruber DSM 13855 3852585 YP_445832.1 CDS SRU_1713 NC_007677.1 2123583 2123783 R hypothetical protein complement(2123583..2123783) Salinibacter ruber DSM 13855 3852815 YP_445833.1 CDS cdsA NC_007677.1 2123939 2124757 R identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase complement(2123939..2124757) Salinibacter ruber DSM 13855 3853131 YP_445834.1 CDS SRU_1715 NC_007677.1 2124805 2125200 R hypothetical protein complement(2124805..2125200) Salinibacter ruber DSM 13855 3852729 YP_445835.1 CDS SRU_1716 NC_007677.1 2125216 2126124 R identified by match to protein family HMM PF02517; hypothetical protein complement(2125216..2126124) Salinibacter ruber DSM 13855 3851907 YP_445836.1 CDS SRU_1718 NC_007677.1 2126682 2127203 D hypothetical protein 2126682..2127203 Salinibacter ruber DSM 13855 3850438 YP_445837.1 CDS SRU_1719 NC_007677.1 2127203 2128915 D identified by match to protein family HMM PF02985; HEAT repeat-containing protein 2127203..2128915 Salinibacter ruber DSM 13855 3852135 YP_445838.1 CDS SRU_1720 NC_007677.1 2128956 2129720 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(2128956..2129720) Salinibacter ruber DSM 13855 3853103 YP_445839.1 CDS SRU_1721 NC_007677.1 2129911 2131467 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; DNA damage-inducible protein 2129911..2131467 Salinibacter ruber DSM 13855 3852809 YP_445840.1 CDS SRU_1722 NC_007677.1 2131508 2131783 D hypothetical protein 2131508..2131783 Salinibacter ruber DSM 13855 3852669 YP_445841.1 CDS SRU_1723 NC_007677.1 2131879 2132403 D identified by match to protein family HMM PF01965; protease I 2131879..2132403 Salinibacter ruber DSM 13855 3852771 YP_445842.1 CDS SRU_1724 NC_007677.1 2132546 2133163 R identified by match to protein family HMM PF00081; match to protein family HMM PF02777; Mn-superoxide dismutase complement(2132546..2133163) Salinibacter ruber DSM 13855 3852050 YP_445843.1 CDS lys1 NC_007677.1 2133675 2134868 R identified by match to protein family HMM PF03435; saccharopine dehydrogenase complement(2133675..2134868) Salinibacter ruber DSM 13855 3850685 YP_445844.1 CDS SRU_1726 NC_007677.1 2134771 2135829 R identified by match to protein family HMM PF00246; zinc carboxypeptidase superfamily protein complement(2134771..2135829) Salinibacter ruber DSM 13855 3852045 YP_445845.1 CDS SRU_1727 NC_007677.1 2136067 2136282 D identified by match to protein family HMM PF00313; hypothetical protein 2136067..2136282 Salinibacter ruber DSM 13855 3851364 YP_445846.1 CDS SRU_1728 NC_007677.1 2136356 2137681 R hypothetical protein complement(2136356..2137681) Salinibacter ruber DSM 13855 3850360 YP_445847.1 CDS SRU_1729 NC_007677.1 2137662 2139842 R hypothetical protein complement(2137662..2139842) Salinibacter ruber DSM 13855 3852720 YP_445848.1 CDS SRU_1730 NC_007677.1 2140038 2140997 R hypothetical protein complement(2140038..2140997) Salinibacter ruber DSM 13855 3850615 YP_445849.1 CDS SRU_1731 NC_007677.1 2141213 2141404 R histone H1-like protein complement(2141213..2141404) Salinibacter ruber DSM 13855 3852856 YP_445850.1 CDS argB NC_007677.1 2141554 2142297 R acetylglutamate kinase complement(2141554..2142297) Salinibacter ruber DSM 13855 3851171 YP_445851.1 CDS SRU_1733 NC_007677.1 2142550 2144757 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2142550..2144757) Salinibacter ruber DSM 13855 3850373 YP_445852.1 CDS pyrF NC_007677.1 2144833 2145828 D identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase 2144833..2145828 Salinibacter ruber DSM 13855 3852095 YP_445853.1 CDS SRU_1734 NC_007677.1 2145797 2146183 R hypothetical protein complement(2145797..2146183) Salinibacter ruber DSM 13855 3851723 YP_445854.1 CDS SRU_1736 NC_007677.1 2146212 2147141 R identified by match to protein family HMM PF00582; universal stress protein complement(2146212..2147141) Salinibacter ruber DSM 13855 3850537 YP_445855.1 CDS SRU_1737 NC_007677.1 2147157 2148068 R identified by match to protein family HMM PF00582; universal stress protein complement(2147157..2148068) Salinibacter ruber DSM 13855 3852562 YP_445856.1 CDS SRU_1738 NC_007677.1 2148281 2148553 D hypothetical protein 2148281..2148553 Salinibacter ruber DSM 13855 3851534 YP_445857.1 CDS SRU_1739 NC_007677.1 2148671 2149768 R identified by match to protein family HMM PF07690; major facilitator superfamily transporter complement(2148671..2149768) Salinibacter ruber DSM 13855 3851693 YP_445858.1 CDS hemL NC_007677.1 2149984 2151324 R identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713; glutamate-1-semialdehyde-2,1-aminomutase complement(2149984..2151324) Salinibacter ruber DSM 13855 3850856 YP_445859.1 CDS hemH NC_007677.1 2152010 2153353 R identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase complement(2152010..2153353) Salinibacter ruber DSM 13855 3851756 YP_445860.1 CDS hemF NC_007677.1 2153483 2154406 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(2153483..2154406) Salinibacter ruber DSM 13855 3851909 YP_445861.1 CDS rluA NC_007677.1 2154564 2155262 R identified by match to protein family HMM PF00849; ribosomal large subunit pseudouridine synthase A complement(2154564..2155262) Salinibacter ruber DSM 13855 3851199 YP_445862.1 CDS SRU_1744 NC_007677.1 2155315 2156343 R identified by match to protein family HMM PF01113; match to protein family HMM PF02629; oxidoreductase complement(2155315..2156343) Salinibacter ruber DSM 13855 3850687 YP_445863.1 CDS lysC NC_007677.1 2156419 2157351 R identified by match to protein family HMM PF00696; aspartate kinase complement(2156419..2157351) Salinibacter ruber DSM 13855 3850971 YP_445864.1 CDS SRU_1746 NC_007677.1 2157409 2158578 D identified by match to protein family HMM PF07670; spore maturation protein A 2157409..2158578 Salinibacter ruber DSM 13855 3852178 YP_445865.1 CDS SRU_1747 NC_007677.1 2158628 2159173 D identified by match to protein family HMM PF07670; hypothetical protein 2158628..2159173 Salinibacter ruber DSM 13855 3851153 YP_445866.1 CDS dacB NC_007677.1 2159220 2160716 R identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(2159220..2160716) Salinibacter ruber DSM 13855 3850869 YP_445867.1 CDS SRU_1749 NC_007677.1 2160817 2162334 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; hypothetical protein complement(2160817..2162334) Salinibacter ruber DSM 13855 3852652 YP_445868.1 CDS SRU_1750 NC_007677.1 2162543 2163271 R hypothetical protein complement(2162543..2163271) Salinibacter ruber DSM 13855 3850588 YP_445869.1 CDS SRU_1751 NC_007677.1 2163291 2163524 D hypothetical protein 2163291..2163524 Salinibacter ruber DSM 13855 3852153 YP_445870.1 CDS SRU_1752 NC_007677.1 2163608 2164120 D hypothetical protein 2163608..2164120 Salinibacter ruber DSM 13855 3851764 YP_445871.1 CDS SRU_1753 NC_007677.1 2164143 2164364 R hypothetical protein complement(2164143..2164364) Salinibacter ruber DSM 13855 3851375 YP_445872.1 CDS phrB NC_007677.1 2164382 2165770 R identified by similarity to SP:P12769; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase complement(2164382..2165770) Salinibacter ruber DSM 13855 3852573 YP_445873.1 CDS gltP NC_007677.1 2165880 2167232 R identified by match to protein family HMM PF00375; proton/glutamate symporter complement(2165880..2167232) Salinibacter ruber DSM 13855 3850522 YP_445874.1 CDS SRU_1756 NC_007677.1 2167392 2168879 R identified by match to protein family HMM PF01940; hypothetical protein complement(2167392..2168879) Salinibacter ruber DSM 13855 3851706 YP_445875.1 CDS rpoC NC_007677.1 2168989 2173335 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(2168989..2173335) Salinibacter ruber DSM 13855 3851120 YP_445876.1 CDS rpoB NC_007677.1 2173447 2177454 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(2173447..2177454) Salinibacter ruber DSM 13855 3851868 YP_445877.1 CDS rplL NC_007677.1 2177890 2178273 R identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 complement(2177890..2178273) Salinibacter ruber DSM 13855 3852738 YP_445878.1 CDS rplJ NC_007677.1 2178412 2178948 R identified by match to protein family HMM PF00466; 50S ribosomal protein L10 complement(2178412..2178948) Salinibacter ruber DSM 13855 3852997 YP_445879.1 CDS rplA NC_007677.1 2179000 2179713 R identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 complement(2179000..2179713) Salinibacter ruber DSM 13855 3851218 YP_445880.1 CDS SRU_1762 NC_007677.1 2179834 2180430 R identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 complement(2179834..2180430) Salinibacter ruber DSM 13855 3853178 YP_445881.1 CDS nusG NC_007677.1 2180393 2180950 R identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG complement(2180393..2180950) Salinibacter ruber DSM 13855 3852228 YP_445882.1 CDS SRU_1764 NC_007677.1 2181000 2181302 R identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE complement(2181000..2181302) Salinibacter ruber DSM 13855 3852262 YP_445883.1 CDS tuf NC_007677.1 2181463 2182653 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2181463..2182653) Salinibacter ruber DSM 13855 3851432 YP_445884.1 CDS SRU_1767 NC_007677.1 2182969 2184885 D sodium-dependent transporter 2182969..2184885 Salinibacter ruber DSM 13855 3853083 YP_445885.1 CDS SRU_1768 NC_007677.1 2185057 2185368 D hypothetical protein 2185057..2185368 Salinibacter ruber DSM 13855 3851299 YP_445886.1 CDS SRU_1769 NC_007677.1 2185493 2185735 R hypothetical protein complement(2185493..2185735) Salinibacter ruber DSM 13855 3851253 YP_445887.1 CDS SRU_1771 NC_007677.1 2185767 2187983 D hypothetical protein 2185767..2187983 Salinibacter ruber DSM 13855 3852712 YP_445888.1 CDS scpA NC_007677.1 2187960 2188781 R identified by match to protein family HMM PF02616; segregation and condensation protein A complement(2187960..2188781) Salinibacter ruber DSM 13855 3853137 YP_445889.1 CDS galE NC_007677.1 2189042 2190028 R identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase complement(2189042..2190028) Salinibacter ruber DSM 13855 3852773 YP_445890.1 CDS pnp NC_007677.1 2190178 2192346 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase complement(2190178..2192346) Salinibacter ruber DSM 13855 3851405 YP_445891.1 CDS rpsO NC_007677.1 2192458 2192724 R identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 complement(2192458..2192724) Salinibacter ruber DSM 13855 3850596 YP_445892.1 CDS ribF NC_007677.1 2192850 2193785 R identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF complement(2192850..2193785) Salinibacter ruber DSM 13855 3850803 YP_445893.1 CDS rbfA NC_007677.1 2194052 2194450 R identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A complement(2194052..2194450) Salinibacter ruber DSM 13855 3851766 YP_445894.1 CDS infB NC_007677.1 2194527 2197616 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 complement(2194527..2197616) Salinibacter ruber DSM 13855 3852143 YP_445895.1 CDS nusA NC_007677.1 2197687 2199327 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(2197687..2199327) Salinibacter ruber DSM 13855 3851608 YP_445896.1 CDS SRU_1779 NC_007677.1 2199391 2200044 R identified by match to protein family HMM PF02576; hypothetical protein complement(2199391..2200044) Salinibacter ruber DSM 13855 3851970 YP_445897.1 CDS prfB NC_007677.1 2200131 2201268 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 complement(join(2200131..2201198,2201200..2201268)) Salinibacter ruber DSM 13855 3850916 YP_445898.1 CDS aspB NC_007677.1 2201376 2202608 R identified by match to protein family HMM PF00155; aspartate aminotransferase complement(2201376..2202608) Salinibacter ruber DSM 13855 3851089 YP_445899.1 CDS SRU_1782 NC_007677.1 2202666 2204255 D identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 2202666..2204255 Salinibacter ruber DSM 13855 3851015 YP_445900.1 CDS SRU_1783 NC_007677.1 2204394 2204702 R hypothetical protein complement(2204394..2204702) Salinibacter ruber DSM 13855 3851039 YP_445901.1 CDS SRU_1784 NC_007677.1 2204881 2205231 R hypothetical protein complement(2204881..2205231) Salinibacter ruber DSM 13855 3851791 YP_445902.1 CDS SRU_1785 NC_007677.1 2205311 2206042 R hypothetical protein complement(2205311..2206042) Salinibacter ruber DSM 13855 3851762 YP_445903.1 CDS SRU_1786 NC_007677.1 2206106 2207587 R identified by match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949; NAD-dependent malic enzyme complement(2206106..2207587) Salinibacter ruber DSM 13855 3850901 YP_445904.1 CDS SRU_1787 NC_007677.1 2207688 2210303 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00717; 30S ribosomal protein S1 complement(2207688..2210303) Salinibacter ruber DSM 13855 3850872 YP_445905.1 CDS cmk NC_007677.1 2210526 2211209 R identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase complement(2210526..2211209) Salinibacter ruber DSM 13855 3851346 YP_445906.1 CDS SRU_1789 NC_007677.1 2211257 2211985 R hypothetical protein complement(2211257..2211985) Salinibacter ruber DSM 13855 3851651 YP_445907.1 CDS SRU_1790 NC_007677.1 2211984 2212547 D identified by match to protein family HMM PF00588; SpoU rRNA methylase family protein 2211984..2212547 Salinibacter ruber DSM 13855 3850598 YP_445908.1 CDS SRU_1791 NC_007677.1 2212682 2214628 D identified by match to protein family HMM PF01642; methylmalonyl-CoA mutase superfamily protein 2212682..2214628 Salinibacter ruber DSM 13855 3850602 YP_445909.1 CDS mutA NC_007677.1 2214693 2216846 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2214693..2216846 Salinibacter ruber DSM 13855 3850764 YP_445910.1 CDS SRU_1793 NC_007677.1 2216891 2217928 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2216891..2217928 Salinibacter ruber DSM 13855 3851562 YP_445911.1 CDS SRU_1794 NC_007677.1 2217973 2218518 D hypothetical protein 2217973..2218518 Salinibacter ruber DSM 13855 3851174 YP_445912.1 CDS SRU_1795 NC_007677.1 2218611 2220977 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2218611..2220977 Salinibacter ruber DSM 13855 3853040 YP_445913.1 CDS gltX NC_007677.1 2221011 2222531 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2221011..2222531) Salinibacter ruber DSM 13855 3852853 YP_445914.1 CDS SRU_1797 NC_007677.1 2222779 2224836 D identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase domain-containing protein 2222779..2224836 Salinibacter ruber DSM 13855 3850727 YP_445915.1 CDS SRU_1798 NC_007677.1 2224814 2225728 D hypothetical protein 2224814..2225728 Salinibacter ruber DSM 13855 3851055 YP_445916.1 CDS SRU_1799 NC_007677.1 2225783 2227177 D identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase 2225783..2227177 Salinibacter ruber DSM 13855 3853176 YP_445917.1 CDS moxR NC_007677.1 2227252 2228247 D identified by match to protein family HMM PF07726; methanol dehydrogenase regulator 2227252..2228247 Salinibacter ruber DSM 13855 3851582 YP_445918.1 CDS SRU_1801 NC_007677.1 2228339 2229175 D identified by match to protein family HMM PF00175; ferredoxin NADP+ reductase 2228339..2229175 Salinibacter ruber DSM 13855 3852690 YP_445919.1 CDS SRU_1802 NC_007677.1 2229305 2229871 D identified by match to protein family HMM PF04186; FxsA cytoplasmic membrane protein 2229305..2229871 Salinibacter ruber DSM 13855 3852194 YP_445920.1 CDS SRU_1803 NC_007677.1 2229900 2230724 R hypothetical protein complement(2229900..2230724) Salinibacter ruber DSM 13855 3852373 YP_445921.1 CDS SRU_1804 NC_007677.1 2230909 2231364 D hypothetical protein 2230909..2231364 Salinibacter ruber DSM 13855 3850619 YP_445922.1 CDS pepP NC_007677.1 2231430 2232878 D identified by match to protein family HMM PF00557; match to protein family HMM PF05195; Xaa-Pro dipeptidase 2231430..2232878 Salinibacter ruber DSM 13855 3851964 YP_445923.1 CDS SRU_1806 NC_007677.1 2232914 2236258 R identified by match to protein family HMM PF00580; ATP-dependent DNA helicase complement(2232914..2236258) Salinibacter ruber DSM 13855 3850929 YP_445924.1 CDS SRU_1807 NC_007677.1 2236388 2239609 R hypothetical protein complement(2236388..2239609) Salinibacter ruber DSM 13855 3850560 YP_445925.1 CDS SRU_1808 NC_007677.1 2239616 2240161 R identified by match to protein family HMM PF00565; protein parB complement(2239616..2240161) Salinibacter ruber DSM 13855 3852253 YP_445926.1 CDS SRU_1809 NC_007677.1 2240698 2242020 D hypothetical protein 2240698..2242020 Salinibacter ruber DSM 13855 3851916 YP_445927.1 CDS SRU_1810 NC_007677.1 2242093 2242434 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase domain-containing protein 2242093..2242434 Salinibacter ruber DSM 13855 3851594 YP_445928.1 CDS SRU_1811 NC_007677.1 2242509 2243135 R hypothetical protein complement(2242509..2243135) Salinibacter ruber DSM 13855 3852608 YP_445929.1 CDS SRU_1812 NC_007677.1 2243266 2246994 D hypothetical protein 2243266..2246994 Salinibacter ruber DSM 13855 3852935 YP_445930.1 CDS nce NC_007677.1 2248053 2249105 D identified by match to protein family HMM PF01699; Na+/Ca2+-exchanging protein 2248053..2249105 Salinibacter ruber DSM 13855 3851710 YP_445931.1 CDS msrB NC_007677.1 2249147 2249551 R identified by similarity to SP:P39903; match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase complement(2249147..2249551) Salinibacter ruber DSM 13855 3851210 YP_445932.1 CDS ftsH NC_007677.1 2249600 2251651 R identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protein FtsH complement(2249600..2251651) Salinibacter ruber DSM 13855 3850540 YP_445933.1 CDS acs NC_007677.1 2252046 2253920 D identified by match to protein family HMM PF00501; acetyl-CoA synthetase 2252046..2253920 Salinibacter ruber DSM 13855 3852404 YP_445934.1 CDS SRU_1821 NC_007677.1 2254028 2255128 D hypothetical protein 2254028..2255128 Salinibacter ruber DSM 13855 3850868 YP_445935.1 CDS SRU_1822 NC_007677.1 2255142 2255510 R identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein complement(2255142..2255510) Salinibacter ruber DSM 13855 3851797 YP_445936.1 CDS SRU_1823 NC_007677.1 2255532 2256128 R hypothetical protein complement(2255532..2256128) Salinibacter ruber DSM 13855 3852184 YP_445937.1 CDS SRU_1824 NC_007677.1 2256155 2257225 D identified by match to protein family HMM PF01887; hypothetical protein 2256155..2257225 Salinibacter ruber DSM 13855 3852265 YP_445938.1 CDS SRU_1825 NC_007677.1 2257271 2258542 D hypothetical protein 2257271..2258542 Salinibacter ruber DSM 13855 3850956 YP_445939.1 CDS vicK NC_007677.1 2258546 2259784 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2258546..2259784) Salinibacter ruber DSM 13855 3852061 YP_445940.1 CDS purA NC_007677.1 2260037 2261356 R catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase complement(2260037..2261356) Salinibacter ruber DSM 13855 3850405 YP_445941.1 CDS secF NC_007677.1 2261410 2262321 R forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF complement(2261410..2262321) Salinibacter ruber DSM 13855 3851162 YP_445942.2 CDS secD NC_007677.1 2262382 2264346 R part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD complement(2262382..2264346) Salinibacter ruber DSM 13855 3852436 YP_445943.1 CDS SRU_1831 NC_007677.1 2264931 2265830 D identified by match to protein family HMM PF00561; lysophospholipase 2264931..2265830 Salinibacter ruber DSM 13855 3852007 YP_445944.1 CDS SRU_1830 NC_007677.1 2265811 2266554 R identified by match to protein family HMM PF04402; hypothetical protein complement(2265811..2266554) Salinibacter ruber DSM 13855 3851602 YP_445945.1 CDS asnS NC_007677.1 2266701 2268335 R identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparaginyl-tRNA synthetase complement(2266701..2268335) Salinibacter ruber DSM 13855 3852242 YP_445946.1 CDS SRU_1833 NC_007677.1 2268382 2269245 R hypothetical protein complement(2268382..2269245) Salinibacter ruber DSM 13855 3851977 YP_445947.1 CDS SRU_1834 NC_007677.1 2269233 2269394 D hypothetical protein 2269233..2269394 Salinibacter ruber DSM 13855 3850403 YP_445948.1 CDS pckA NC_007677.1 2269506 2271113 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2269506..2271113 Salinibacter ruber DSM 13855 3851043 YP_445949.1 CDS SRU_1837 NC_007677.1 2271618 2272052 R identified by match to protein family HMM PF00583; acetyltransferase complement(2271618..2272052) Salinibacter ruber DSM 13855 3853046 YP_445950.1 CDS asd NC_007677.1 2272220 2273311 R catalyzes the formation of aspartate semialdehyde from aspartyl phosphate; aspartate-semialdehyde dehydrogenase complement(2272220..2273311) Salinibacter ruber DSM 13855 3851885 YP_445951.1 CDS SRU_1839 NC_007677.1 2273541 2274434 D identified by match to protein family HMM PF00763; match to protein family HMM PF02882; FolD bifunctional protein 2273541..2274434 Salinibacter ruber DSM 13855 3852904 YP_445952.1 CDS SRU_1840 NC_007677.1 2274471 2275505 D identified by match to protein family HMM PF00924; small conductance mechanosensitive ion channel (MscS) family protein 2274471..2275505 Salinibacter ruber DSM 13855 3850648 YP_445953.1 CDS SRU_1841 NC_007677.1 2275514 2275933 R identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149; hypothetical protein complement(2275514..2275933) Salinibacter ruber DSM 13855 3853166 YP_445954.1 CDS surE NC_007677.1 2275967 2276785 R identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE complement(2275967..2276785) Salinibacter ruber DSM 13855 3851139 YP_445955.1 CDS panB NC_007677.1 2276859 2277656 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(2276859..2277656) Salinibacter ruber DSM 13855 3850715 YP_445956.1 CDS SRU_1844 NC_007677.1 2277838 2278443 R identified by match to protein family HMM PF03938; outer membrane lipoprotein complement(2277838..2278443) Salinibacter ruber DSM 13855 3853020 YP_445957.1 CDS SRU_1845 NC_007677.1 2278507 2279115 R outer membrane protein OmpH complement(2278507..2279115) Salinibacter ruber DSM 13855 3851330 YP_445958.1 CDS SRU_1846 NC_007677.1 2279173 2281707 R identified by match to protein family HMM PF01103; match to protein family HMM PF07244; outer membrane protein complement(2279173..2281707) Salinibacter ruber DSM 13855 3852349 YP_445959.1 CDS uppS NC_007677.1 2281877 2282803 R identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase complement(2281877..2282803) Salinibacter ruber DSM 13855 3850927 YP_445960.1 CDS SRU_1848 NC_007677.1 2282874 2284316 R identified by match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease complement(2282874..2284316) Salinibacter ruber DSM 13855 3851468 YP_445961.2 CDS dxr NC_007677.1 2284386 2285591 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(2284386..2285591) Salinibacter ruber DSM 13855 3850434 YP_445962.1 CDS SRU_1850 NC_007677.1 2285775 2287658 D hypothetical protein 2285775..2287658 Salinibacter ruber DSM 13855 3851341 YP_445963.1 CDS SRU_1851 NC_007677.1 2287710 2288987 D hypothetical protein 2287710..2288987 Salinibacter ruber DSM 13855 3851727 YP_445964.1 CDS SRU_1852 NC_007677.1 2289039 2289593 D identified by match to protein family HMM PF03061; thioesterase domain-containing protein 2289039..2289593 Salinibacter ruber DSM 13855 3851186 YP_445965.1 CDS SRU_1853 NC_007677.1 2289643 2290086 D sigma-54 interacting transcription regulator protein 2289643..2290086 Salinibacter ruber DSM 13855 3850471 YP_445966.1 CDS SRU_1854 NC_007677.1 2290114 2291037 D identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; dTDP-4-dehydrorhamnose reductase 2290114..2291037 Salinibacter ruber DSM 13855 3852917 YP_445967.1 CDS serS NC_007677.1 2291084 2292370 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; seryl-tRNA synthetase 2291084..2292370 Salinibacter ruber DSM 13855 3852116 YP_445968.1 CDS fbp NC_007677.1 2292470 2293660 R identified by match to protein family HMM PF00316; fructose-1,6-bisphosphatase complement(2292470..2293660) Salinibacter ruber DSM 13855 3851372 YP_445969.1 CDS SRU_1857 NC_007677.1 2293671 2294381 R hypothetical protein complement(2293671..2294381) Salinibacter ruber DSM 13855 3850947 YP_445970.1 CDS SRU_1858 NC_007677.1 2294391 2295677 R identified by match to protein family HMM PF00266; match to protein family HMM PF01212; cysteine desulfurase complement(2294391..2295677) Salinibacter ruber DSM 13855 3852264 YP_445971.1 CDS murA NC_007677.1 2295679 2297106 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2295679..2297106 Salinibacter ruber DSM 13855 3853138 YP_445972.1 CDS SRU_1860 NC_007677.1 2297164 2300652 R hypothetical protein complement(2297164..2300652) Salinibacter ruber DSM 13855 3851606 YP_445973.1 CDS SRU_1861 NC_007677.1 2300831 2301754 R identified by match to protein family HMM PF01436; hypothetical protein complement(2300831..2301754) Salinibacter ruber DSM 13855 3851001 YP_445974.1 CDS purD NC_007677.1 2301769 2303061 R identified by match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase complement(2301769..2303061) Salinibacter ruber DSM 13855 3852623 YP_445975.1 CDS SRU_1863 NC_007677.1 2303166 2304461 D hypothetical protein 2303166..2304461 Salinibacter ruber DSM 13855 3851960 YP_445976.1 CDS SRU_1864 NC_007677.1 2304400 2305497 D hypothetical protein 2304400..2305497 Salinibacter ruber DSM 13855 3851668 YP_445977.1 CDS SRU_1865 NC_007677.1 2305545 2306192 D identified by match to protein family HMM PF01522; polysaccharide deacetylase 2305545..2306192 Salinibacter ruber DSM 13855 3850655 YP_445978.1 CDS acnA NC_007677.1 2306332 2309064 D identified by match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR01341; aconitate hydratase 1 2306332..2309064 Salinibacter ruber DSM 13855 3850472 YP_445979.1 CDS SRU_1867 NC_007677.1 2309107 2309511 R identified by match to protein family HMM PF00376; transcription regulator protein complement(2309107..2309511) Salinibacter ruber DSM 13855 3852842 YP_445980.1 CDS SRU_1868 NC_007677.1 2309553 2312612 R exonuclease SbcC complement(2309553..2312612) Salinibacter ruber DSM 13855 3852844 YP_445981.1 CDS SRU_1869 NC_007677.1 2312703 2313227 R hypothetical protein complement(2312703..2313227) Salinibacter ruber DSM 13855 3850707 YP_445982.1 CDS cvpA NC_007677.1 2313243 2313803 R identified by match to protein family HMM PF02674; CvpA family protein complement(2313243..2313803) Salinibacter ruber DSM 13855 3852452 YP_445983.1 CDS SRU_1871 NC_007677.1 2313993 2314523 R identified by match to protein family HMM PF02637; GatB/YqeY domain-containing protein complement(2313993..2314523) Salinibacter ruber DSM 13855 3853128 YP_445984.1 CDS ptsI NC_007677.1 2314542 2316389 R identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase complement(2314542..2316389) Salinibacter ruber DSM 13855 3852983 YP_445985.1 CDS SRU_1873 NC_007677.1 2316435 2316704 R identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; HPr-like protein crh complement(2316435..2316704) Salinibacter ruber DSM 13855 3850926 YP_445986.1 CDS idsA NC_007677.1 2316800 2317828 R identified by match to protein family HMM PF00348; polyprenyl synthetase complement(2316800..2317828) Salinibacter ruber DSM 13855 3851124 YP_445987.1 CDS adk NC_007677.1 2317850 2318488 R identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase complement(2317850..2318488) Salinibacter ruber DSM 13855 3852719 YP_445988.1 CDS SRU_1876 NC_007677.1 2318546 2319067 R hypothetical protein complement(2318546..2319067) Salinibacter ruber DSM 13855 3851772 YP_445989.1 CDS SRU_1877 NC_007677.1 2319125 2319562 R hypothetical protein complement(2319125..2319562) Salinibacter ruber DSM 13855 3851235 YP_445990.1 CDS SRU_1878 NC_007677.1 2319674 2320102 D hypothetical protein 2319674..2320102 Salinibacter ruber DSM 13855 3853181 YP_445991.1 CDS SRU_1879 NC_007677.1 2320105 2321253 R hypothetical protein complement(2320105..2321253) Salinibacter ruber DSM 13855 3852789 YP_445992.1 CDS ispH NC_007677.1 2321348 2322589 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2321348..2322589 Salinibacter ruber DSM 13855 3852822 YP_445993.1 CDS SRU_1881 NC_007677.1 2322682 2323425 D methyltransferase 2322682..2323425 Salinibacter ruber DSM 13855 3851024 YP_445994.1 CDS SRU_1882 NC_007677.1 2323603 2324973 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20/M25/M40 family peptidase 2323603..2324973 Salinibacter ruber DSM 13855 3850832 YP_445995.1 CDS SRU_1884 NC_007677.1 2325773 2326888 D identified by match to protein family HMM TIGR00374; hypothetical protein 2325773..2326888 Salinibacter ruber DSM 13855 3850807 YP_445996.1 CDS SRU_1885 NC_007677.1 2326923 2327378 R zinc transporter complement(2326923..2327378) Salinibacter ruber DSM 13855 3852463 YP_445997.1 CDS SRU_1886 NC_007677.1 2327865 2329181 R identified by match to protein family HMM PF02492; match to protein family HMM PF07683; CobW/P47K family protein complement(2327865..2329181) Salinibacter ruber DSM 13855 3852415 YP_445998.1 CDS SRU_1887 NC_007677.1 2329201 2331603 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor protein complement(2329201..2331603) Salinibacter ruber DSM 13855 3851618 YP_445999.1 CDS SRU_1888 NC_007677.1 2332260 2332874 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 2332260..2332874 Salinibacter ruber DSM 13855 3851751 YP_446000.1 CDS SRU_1889 NC_007677.1 2332922 2333362 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(2332922..2333362) Salinibacter ruber DSM 13855 3851721 YP_446001.1 CDS SRU_1890 NC_007677.1 2333355 2334137 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; pyridoxal phosphate phosphatase complement(2333355..2334137) Salinibacter ruber DSM 13855 3852942 YP_446002.1 CDS SRU_1891 NC_007677.1 2337183 2337683 R hypothetical protein complement(2337183..2337683) Salinibacter ruber DSM 13855 3851448 YP_446003.1 CDS SRU_1892 NC_007677.1 2337819 2338421 R hypothetical protein complement(2337819..2338421) Salinibacter ruber DSM 13855 3851881 YP_446004.1 CDS SRU_1893 NC_007677.1 2338648 2339067 R hypothetical protein complement(2338648..2339067) Salinibacter ruber DSM 13855 3852319 YP_446005.1 CDS SRU_1894 NC_007677.1 2339177 2340829 R identified by match to protein family HMM PF01433; metallopeptidase complement(2339177..2340829) Salinibacter ruber DSM 13855 3852820 YP_446006.1 CDS SRU_1895 NC_007677.1 2340851 2341561 R hypothetical protein complement(2340851..2341561) Salinibacter ruber DSM 13855 3851670 YP_446007.1 CDS SRU_1896 NC_007677.1 2341811 2342938 R hypothetical protein complement(2341811..2342938) Salinibacter ruber DSM 13855 3851396 YP_446008.1 CDS SRU_1898 NC_007677.1 2343173 2343472 D identified by match to protein family HMM TIGR02605; FmdB family regulatory protein 2343173..2343472 Salinibacter ruber DSM 13855 3852282 YP_446009.1 CDS fdx NC_007677.1 2343520 2343903 R identified by match to protein family HMM PF00111; ferredoxin complement(2343520..2343903) Salinibacter ruber DSM 13855 3852970 YP_446010.1 CDS idi NC_007677.1 2344117 2344746 D identified by match to protein family HMM PF00293; match to protein family HMM TIGR02150; isopentenyl-diphosphate delta-isomerase 2344117..2344746 Salinibacter ruber DSM 13855 3852096 YP_446011.1 CDS SRU_1901 NC_007677.1 2345162 2345977 D identified by match to protein family HMM PF04784; hypothetical protein 2345162..2345977 Salinibacter ruber DSM 13855 3851626 YP_446012.1 CDS gatB NC_007677.1 2346090 2347616 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2346090..2347616 Salinibacter ruber DSM 13855 3852922 YP_446013.1 CDS SRU_1903 NC_007677.1 2347625 2349043 D hypothetical protein 2347625..2349043 Salinibacter ruber DSM 13855 3850412 YP_446014.1 CDS SRU_1904 NC_007677.1 2349075 2349734 D hypothetical protein 2349075..2349734 Salinibacter ruber DSM 13855 3852775 YP_446015.1 CDS tpiA NC_007677.1 2349782 2350564 D identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase 2349782..2350564 Salinibacter ruber DSM 13855 3851620 YP_446016.1 CDS SRU_1906 NC_007677.1 2350591 2351904 D catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 2350591..2351904 Salinibacter ruber DSM 13855 3851785 YP_446017.1 CDS SRU_1907 NC_007677.1 2352108 2353013 R hypothetical protein complement(2352108..2353013) Salinibacter ruber DSM 13855 3851054 YP_446018.1 CDS SRU_1908 NC_007677.1 2353176 2354993 D identified by match to protein family HMM PF00004; cell division protein 2353176..2354993 Salinibacter ruber DSM 13855 3850572 YP_446019.1 CDS SRU_1909 NC_007677.1 2355029 2356873 D identified by match to protein family HMM PF01979; amidohydrolase family protein 2355029..2356873 Salinibacter ruber DSM 13855 3850850 YP_446020.1 CDS SRU_1910 NC_007677.1 2356951 2358378 D identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase 2356951..2358378 Salinibacter ruber DSM 13855 3851801 YP_446021.1 CDS SRU_1911 NC_007677.1 2358428 2359771 D identified by match to protein family HMM PF01979; amidohydrolase 2358428..2359771 Salinibacter ruber DSM 13855 3853016 YP_446022.1 CDS nadA NC_007677.1 2359898 2360992 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2359898..2360992) Salinibacter ruber DSM 13855 3851758 YP_446023.1 CDS nadC NC_007677.1 2361049 2361903 R identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase complement(2361049..2361903) Salinibacter ruber DSM 13855 3850816 YP_446024.1 CDS SRU_1914 NC_007677.1 2362028 2363524 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; FAD binding domain-containing protein complement(2362028..2363524) Salinibacter ruber DSM 13855 3850574 YP_446025.1 CDS SRU_1915 NC_007677.1 2363745 2364170 R identified by match to protein family HMM PF00041; cellulose-binding domain-containing protein complement(2363745..2364170) Salinibacter ruber DSM 13855 3852280 YP_446026.1 CDS SRU_1916 NC_007677.1 2364216 2367968 R identified by match to protein family HMM PF01336; OB-fold nucleic acid binding domain-containing protein complement(2364216..2367968) Salinibacter ruber DSM 13855 3851460 YP_446027.1 CDS SRU_1917 NC_007677.1 2368204 2370414 R hypothetical protein complement(2368204..2370414) Salinibacter ruber DSM 13855 3852054 YP_446028.1 CDS SRU_1918 NC_007677.1 2370615 2371433 R hypothetical protein complement(2370615..2371433) Salinibacter ruber DSM 13855 3852155 YP_446029.1 CDS SRU_1919 NC_007677.1 2371666 2375016 R hypothetical protein complement(2371666..2375016) Salinibacter ruber DSM 13855 3851332 YP_446030.1 CDS SRU_1920 NC_007677.1 2375370 2376269 R hypothetical protein complement(2375370..2376269) Salinibacter ruber DSM 13855 3851778 YP_446031.1 CDS SRU_1921 NC_007677.1 2376514 2380029 R hypothetical protein complement(2376514..2380029) Salinibacter ruber DSM 13855 3853010 YP_446032.1 CDS SRU_1922 NC_007677.1 2380435 2381127 R identified by match to protein family HMM PF07758; hypothetical protein complement(2380435..2381127) Salinibacter ruber DSM 13855 3852581 YP_446033.1 CDS SRU_1923 NC_007677.1 2381142 2381849 R hypothetical protein complement(2381142..2381849) Salinibacter ruber DSM 13855 3852064 YP_446034.1 CDS SRU_1924 NC_007677.1 2382145 2382576 D hypothetical protein 2382145..2382576 Salinibacter ruber DSM 13855 3850686 YP_446035.1 CDS SRU_1925 NC_007677.1 2382618 2383469 D identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 2382618..2383469 Salinibacter ruber DSM 13855 3850741 YP_446036.1 CDS SRU_1926 NC_007677.1 2383497 2383973 R hypothetical protein complement(2383497..2383973) Salinibacter ruber DSM 13855 3851423 YP_446037.1 CDS SRU_1927 NC_007677.1 2384139 2384366 D hypothetical protein 2384139..2384366 Salinibacter ruber DSM 13855 3852692 YP_446038.1 CDS SRU_1928 NC_007677.1 2384429 2386411 D hypothetical protein 2384429..2386411 Salinibacter ruber DSM 13855 3852269 YP_446039.1 CDS glgC NC_007677.1 2386559 2387842 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2386559..2387842 Salinibacter ruber DSM 13855 3851443 YP_446040.1 CDS SRU_1930 NC_007677.1 2387901 2389208 D identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149; glycosyl transferase family protein 2387901..2389208 Salinibacter ruber DSM 13855 3852013 YP_446041.1 CDS SRU_1931 NC_007677.1 2389603 2389896 D identified by match to protein family HMM PF04255; hypothetical protein 2389603..2389896 Salinibacter ruber DSM 13855 3852824 YP_446042.1 CDS SRU_1932 NC_007677.1 2390741 2391004 R hypothetical protein complement(2390741..2391004) Salinibacter ruber DSM 13855 3850895 YP_446043.1 CDS SRU_1933 NC_007677.1 2391001 2392224 R identified by match to protein family HMM PF03576; T4 family peptidase complement(2391001..2392224) Salinibacter ruber DSM 13855 3851676 YP_446044.1 CDS SRU_1934 NC_007677.1 2392349 2392924 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-H factor 2392349..2392924 Salinibacter ruber DSM 13855 3852907 YP_446045.1 CDS SRU_1935 NC_007677.1 2393272 2393844 R hypothetical protein complement(2393272..2393844) Salinibacter ruber DSM 13855 3851510 YP_446046.1 CDS SRU_1936 NC_007677.1 2393896 2395650 D identified by match to protein family HMM PF02210; thrombospondin N-terminal-like domain-containing protein 2393896..2395650 Salinibacter ruber DSM 13855 3852437 YP_446047.1 CDS SRU_1937 NC_007677.1 2395766 2396446 D identified by match to protein family HMM PF00753; metallo-beta-lactamase superfamily protein 2395766..2396446 Salinibacter ruber DSM 13855 3850989 YP_446048.1 CDS SRU_1938 NC_007677.1 2396567 2397091 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphoesterase 2396567..2397091 Salinibacter ruber DSM 13855 3852952 YP_446049.1 CDS SRU_1939 NC_007677.1 2397738 2399027 R hypothetical protein complement(2397738..2399027) Salinibacter ruber DSM 13855 3851315 YP_446050.1 CDS SRU_1940 NC_007677.1 2399249 2399923 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2399249..2399923 Salinibacter ruber DSM 13855 3851669 YP_446051.1 CDS SRU_1941 NC_007677.1 2400066 2401460 D identified by match to protein family HMM PF00753; match to protein family HMM PF07521; Ysh1p: subunit of polyadenylation factor I 2400066..2401460 Salinibacter ruber DSM 13855 3851126 YP_446052.1 CDS SRU_1942 NC_007677.1 2402001 2404685 D identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; FAD linked oxidase 2402001..2404685 Salinibacter ruber DSM 13855 3851996 YP_446053.1 CDS ctp NC_007677.1 2404732 2406342 R identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxyl-terminal protease complement(2404732..2406342) Salinibacter ruber DSM 13855 3852293 YP_446054.1 CDS SRU_1944 NC_007677.1 2406700 2407230 D hypothetical protein 2406700..2407230 Salinibacter ruber DSM 13855 3852357 YP_446055.1 CDS pcm NC_007677.1 2407353 2408045 R identified by similarity to SP:P24206; match to protein family HMM PF01135; match to protein family HMM TIGR00080; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(2407353..2408045) Salinibacter ruber DSM 13855 3852748 YP_446056.1 CDS SRU_1946 NC_007677.1 2408111 2408911 R identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(2408111..2408911) Salinibacter ruber DSM 13855 3851808 YP_446057.1 CDS folP NC_007677.1 2408972 2409835 R identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase complement(2408972..2409835) Salinibacter ruber DSM 13855 3851507 YP_446058.1 CDS SRU_1948 NC_007677.1 2410079 2411620 D identified by match to protein family HMM PF03321; GH3 auxin-responsive promoter superfamily protein 2410079..2411620 Salinibacter ruber DSM 13855 3850529 YP_446059.1 CDS rpoD NC_007677.1 2411767 2412708 D identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-70 factor 2411767..2412708 Salinibacter ruber DSM 13855 3852379 YP_446060.1 CDS SRU_1950 NC_007677.1 2412805 2413581 D hypothetical protein 2412805..2413581 Salinibacter ruber DSM 13855 3852458 YP_446061.1 CDS SRU_1951 NC_007677.1 2413598 2415310 D identified by match to protein family HMM PF03349; long-chain fatty acid transport protein 2413598..2415310 Salinibacter ruber DSM 13855 3852070 YP_446062.1 CDS SRU_1952 NC_007677.1 2415316 2416557 D hypothetical protein 2415316..2416557 Salinibacter ruber DSM 13855 3853087 YP_446063.1 CDS SRU_1953 NC_007677.1 2416565 2417551 R hypothetical protein complement(2416565..2417551) Salinibacter ruber DSM 13855 3852427 YP_446064.1 CDS SRU_1954 NC_007677.1 2417601 2418566 R identified by match to protein family HMM PF02687; cell division ABC transporter permease FtsX complement(2417601..2418566) Salinibacter ruber DSM 13855 3851343 YP_446065.1 CDS pheA NC_007677.1 2418897 2419757 R identified by match to protein family HMM PF00800; match to protein family HMM PF01842; prephenate dehydratase complement(2418897..2419757) Salinibacter ruber DSM 13855 3851565 YP_446066.1 CDS SRU_1956 NC_007677.1 2420003 2420440 R identified by match to protein family HMM PF00011; heat shock protein complement(2420003..2420440) Salinibacter ruber DSM 13855 3852243 YP_446067.1 CDS SRU_1957 NC_007677.1 2420657 2422111 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(2420657..2422111) Salinibacter ruber DSM 13855 3851682 YP_446068.1 CDS SRU_1958 NC_007677.1 2422310 2423035 D identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 2422310..2423035 Salinibacter ruber DSM 13855 3852051 YP_446069.1 CDS SRU_1959 NC_007677.1 2423095 2424168 R hypothetical protein complement(2423095..2424168) Salinibacter ruber DSM 13855 3850954 YP_446070.1 CDS SRU_1960 NC_007677.1 2424397 2425695 D hypothetical protein 2424397..2425695 Salinibacter ruber DSM 13855 3851600 YP_446071.1 CDS dut NC_007677.1 2425728 2426180 R identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5`-triphosphate nucleotidohydrolase complement(2425728..2426180) Salinibacter ruber DSM 13855 3853142 YP_446072.1 CDS SRU_1962 NC_007677.1 2426242 2428077 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; proton/peptide symporter family protein complement(2426242..2428077) Salinibacter ruber DSM 13855 3852830 YP_446073.1 CDS aspS NC_007677.1 2428395 2430284 D identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 2428395..2430284 Salinibacter ruber DSM 13855 3852594 YP_446074.1 CDS SRU_1964 NC_007677.1 2430295 2430753 D hypothetical protein 2430295..2430753 Salinibacter ruber DSM 13855 3851400 YP_446075.1 CDS SRU_1965 NC_007677.1 2430771 2431121 R hypothetical protein complement(2430771..2431121) Salinibacter ruber DSM 13855 3853067 YP_446076.1 CDS SRU_1966 NC_007677.1 2431242 2433143 R identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase subunit beta complement(2431242..2433143) Salinibacter ruber DSM 13855 3852097 YP_446077.1 CDS SRU_1967 NC_007677.1 2433337 2434050 R identified by match to protein family HMM TIGR01352; TonB family protein complement(2433337..2434050) Salinibacter ruber DSM 13855 3852295 YP_446078.1 CDS SRU_1968 NC_007677.1 2434170 2434973 R identified by match to protein family HMM PF00149; transcriptional regulator, Icc-like protein complement(2434170..2434973) Salinibacter ruber DSM 13855 3852529 YP_446079.1 CDS SRU_1969 NC_007677.1 2435007 2436404 R identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase complement(2435007..2436404) Salinibacter ruber DSM 13855 3851983 YP_446080.1 CDS SRU_1970 NC_007677.1 2436500 2437483 R identified by match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta complement(2436500..2437483) Salinibacter ruber DSM 13855 3850941 YP_446081.1 CDS SRU_1971 NC_007677.1 2437579 2438991 R identified by similarity to SP:Q9R9N5; match to protein family HMM PF00676; pyruvate dehydrogenase E1 component subunit alpha complement(2437579..2438991) Salinibacter ruber DSM 13855 3852390 YP_446082.1 CDS SRU_1972 NC_007677.1 2439217 2440098 D identified by match to protein family HMM PF00535; glycosyl transferase family protein 2439217..2440098 Salinibacter ruber DSM 13855 3850610 YP_446083.1 CDS icd NC_007677.1 2440244 2441479 D identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183; isocitrate dehydrogenase 2440244..2441479 Salinibacter ruber DSM 13855 3851830 YP_446084.1 CDS SRU_1974 NC_007677.1 2441539 2442234 D identified by match to protein family HMM PF00293; NUDIX family hydrolase 2441539..2442234 Salinibacter ruber DSM 13855 3850480 YP_446085.1 CDS SRU_1975 NC_007677.1 2442244 2443482 R identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase family protein complement(2442244..2443482) Salinibacter ruber DSM 13855 3851071 YP_446086.1 CDS SRU_1976 NC_007677.1 2443562 2443846 R hypothetical protein complement(2443562..2443846) Salinibacter ruber DSM 13855 3850890 YP_446087.1 CDS SRU_1977 NC_007677.1 2443976 2444614 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2443976..2444614 Salinibacter ruber DSM 13855 3851198 YP_446088.1 CDS SRU_1978 NC_007677.1 2444664 2446076 D identified by match to protein family HMM PF02321; outer membrane efflux family protein 2444664..2446076 Salinibacter ruber DSM 13855 3850776 YP_446089.1 CDS SRU_1979 NC_007677.1 2446098 2447219 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; acriflavin resistance protein AcrE 2446098..2447219 Salinibacter ruber DSM 13855 3852910 YP_446090.1 CDS SRU_1980 NC_007677.1 2447266 2450511 D identified by match to protein family HMM PF00873; AcrB/AcrD/AcrF family transporter 2447266..2450511 Salinibacter ruber DSM 13855 3851485 YP_446091.1 CDS SRU_1981 NC_007677.1 2450815 2451141 D hypothetical protein 2450815..2451141 Salinibacter ruber DSM 13855 3853198 YP_446092.1 CDS SRU_1982 NC_007677.1 2451468 2452082 R hypothetical protein complement(2451468..2452082) Salinibacter ruber DSM 13855 3852702 YP_446093.1 CDS SRU_1983 NC_007677.1 2452096 2452725 R SAM-dependent methyltransferase complement(2452096..2452725) Salinibacter ruber DSM 13855 3851244 YP_446094.1 CDS SRU_1984 NC_007677.1 2452764 2453753 R hypothetical protein complement(2452764..2453753) Salinibacter ruber DSM 13855 3852430 YP_446095.1 CDS SRU_1985 NC_007677.1 2453804 2454838 D identified by match to protein family HMM PF00582; universal stress protein 2453804..2454838 Salinibacter ruber DSM 13855 3852238 YP_446096.1 CDS SRU_1986 NC_007677.1 2454944 2455867 D identified by match to protein family HMM PF01676; metalloenzyme superfamily protein 2454944..2455867 Salinibacter ruber DSM 13855 3852324 YP_446097.1 CDS SRU_1987 NC_007677.1 2455872 2458097 R hypothetical protein complement(2455872..2458097) Salinibacter ruber DSM 13855 3851864 YP_446098.1 CDS SRU_1988 NC_007677.1 2458153 2460096 R hypothetical protein complement(2458153..2460096) Salinibacter ruber DSM 13855 3852456 YP_446099.1 CDS SRU_1990 NC_007677.1 2460591 2461103 R hypothetical protein complement(2460591..2461103) Salinibacter ruber DSM 13855 3852193 YP_446100.1 CDS SRU_1991 NC_007677.1 2461319 2462098 D hypothetical protein 2461319..2462098 Salinibacter ruber DSM 13855 3850381 YP_446101.1 CDS SRU_1992 NC_007677.1 2462171 2462647 R identified by match to protein family HMM TIGR00229; light- and oxygen-sensing histidine kinase complement(2462171..2462647) Salinibacter ruber DSM 13855 3852418 YP_446102.1 CDS SRU_1993 NC_007677.1 2462842 2463333 D hypothetical protein 2462842..2463333 Salinibacter ruber DSM 13855 3850823 YP_446103.1 CDS SRU_1994 NC_007677.1 2463396 2463740 R hypothetical protein complement(2463396..2463740) Salinibacter ruber DSM 13855 3851754 YP_446104.1 CDS SRU_1995 NC_007677.1 2464166 2467654 D identified by match to protein family HMM PF00136; match to protein family HMM PF03104; match to protein family HMM TIGR01445; DNA polymerase II 2464166..2467654 Salinibacter ruber DSM 13855 3850861 YP_446105.1 CDS SRU_1996 NC_007677.1 2467756 2469786 D identified by similarity to GB:AAS13188.1; hypothetical protein 2467756..2469786 Salinibacter ruber DSM 13855 3850863 YP_446106.1 CDS SRU_1997 NC_007677.1 2469993 2470184 D hypothetical protein 2469993..2470184 Salinibacter ruber DSM 13855 3852129 YP_446107.1 CDS panF NC_007677.1 2470577 2472079 D identified by match to protein family HMM PF00474; pantothenate permease 2470577..2472079 Salinibacter ruber DSM 13855 3850704 YP_446108.1 CDS SRU_1999 NC_007677.1 2472096 2473160 D hypothetical protein 2472096..2473160 Salinibacter ruber DSM 13855 3852851 YP_446109.1 CDS ppa NC_007677.1 2473283 2473828 R identified by match to protein family HMM PF00719; inorganic pyrophosphatase complement(2473283..2473828) Salinibacter ruber DSM 13855 3852163 YP_446110.1 CDS SRU_2001 NC_007677.1 2474101 2474769 R hypothetical protein complement(2474101..2474769) Salinibacter ruber DSM 13855 3851750 YP_446111.1 CDS SRU_2002 NC_007677.1 2474884 2475870 R hypothetical protein complement(2474884..2475870) Salinibacter ruber DSM 13855 3852485 YP_446112.1 CDS SRU_2003 NC_007677.1 2476043 2476894 R identified by match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein complement(2476043..2476894) Salinibacter ruber DSM 13855 3851283 YP_446113.1 CDS SRU_2004 NC_007677.1 2477030 2477830 R identified by match to protein family HMM PF04313; Type I restriction enzyme R protein N terminus (HSDR_N) complement(2477030..2477830) Salinibacter ruber DSM 13855 3852346 YP_446114.1 CDS SRU_2005 NC_007677.1 2478047 2479159 R identified by match to protein family HMM PF00756; esterase superfamily protein complement(2478047..2479159) Salinibacter ruber DSM 13855 3851018 YP_446115.1 CDS SRU_2006 NC_007677.1 2479205 2482777 R hypothetical protein complement(2479205..2482777) Salinibacter ruber DSM 13855 3851442 YP_446116.1 CDS SRU_2007 NC_007677.1 2482774 2484081 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(2482774..2484081) Salinibacter ruber DSM 13855 3850650 YP_446117.1 CDS SRU_2008 NC_007677.1 2484929 2488555 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase/response regulator 2484929..2488555 Salinibacter ruber DSM 13855 3851580 YP_446118.1 CDS SRU_2009 NC_007677.1 2488784 2489155 R hypothetical protein complement(2488784..2489155) Salinibacter ruber DSM 13855 3850964 YP_446119.1 CDS SRU_2010 NC_007677.1 2489216 2489737 R transposase, orfB complement(2489216..2489737) Salinibacter ruber DSM 13855 3851728 YP_446120.1 CDS SRU_2011 NC_007677.1 2489797 2490267 R transposase, orfA complement(2489797..2490267) Salinibacter ruber DSM 13855 3852765 YP_446121.1 CDS SRU_2012 NC_007677.1 2490315 2491451 R hypothetical protein complement(2490315..2491451) Salinibacter ruber DSM 13855 3850883 YP_446122.1 CDS SRU_2013 NC_007677.1 2491836 2492114 D identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2491836..2492114 Salinibacter ruber DSM 13855 3850410 YP_446123.1 CDS SRU_2015 NC_007677.1 2493035 2496055 D hypothetical protein 2493035..2496055 Salinibacter ruber DSM 13855 3850552 YP_446124.1 CDS SRU_2016 NC_007677.1 2496734 2497102 R hypothetical protein complement(2496734..2497102) Salinibacter ruber DSM 13855 3853174 YP_446125.1 CDS SRU_2017 NC_007677.1 2497106 2498404 R hypothetical protein complement(2497106..2498404) Salinibacter ruber DSM 13855 3852267 YP_446126.1 CDS SRU_2018 NC_007677.1 2498447 2499310 R hypothetical protein complement(2498447..2499310) Salinibacter ruber DSM 13855 3851841 YP_446127.1 CDS lacD NC_007677.1 2499447 2500505 R identified by match to protein family HMM PF04274; tagatose 1,6-diphosphate aldolase complement(2499447..2500505) Salinibacter ruber DSM 13855 3850695 YP_446128.1 CDS SRU_2020 NC_007677.1 2501129 2501515 R identified by match to protein family HMM PF03703; membrane flanked domain-containing protein complement(2501129..2501515) Salinibacter ruber DSM 13855 3850763 YP_446129.1 CDS SRU_2021 NC_007677.1 2502093 2502263 R hypothetical protein complement(2502093..2502263) Salinibacter ruber DSM 13855 3851263 YP_446130.1 CDS ppa NC_007677.1 2502493 2503164 R identified by match to protein family HMM PF00719; inorganic pyrophosphatase complement(2502493..2503164) Salinibacter ruber DSM 13855 3851382 YP_446131.1 CDS SRU_2023 NC_007677.1 2504117 2504395 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 2504117..2504395 Salinibacter ruber DSM 13855 3853134 YP_446132.1 CDS SRU_2024 NC_007677.1 2504359 2504835 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 2504359..2504835 Salinibacter ruber DSM 13855 3851624 YP_446133.1 CDS SRU_2025 NC_007677.1 2504947 2507931 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01782; TonB-dependent receptor 2504947..2507931 Salinibacter ruber DSM 13855 3852635 YP_446134.1 CDS SRU_2026 NC_007677.1 2508041 2509819 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 2508041..2509819 Salinibacter ruber DSM 13855 3850452 YP_446135.1 CDS SRU_2027 NC_007677.1 2509961 2511733 D hypothetical protein 2509961..2511733 Salinibacter ruber DSM 13855 3852297 YP_446136.1 CDS SRU_2028 NC_007677.1 2511914 2512948 R identified by match to protein family HMM PF01699; cation transporter complement(2511914..2512948) Salinibacter ruber DSM 13855 3851560 YP_446137.1 CDS SRU_2029 NC_007677.1 2513688 2514665 D hypothetical protein 2513688..2514665 Salinibacter ruber DSM 13855 3852222 YP_446138.1 CDS SRU_2030 NC_007677.1 2514824 2515249 D hypothetical protein 2514824..2515249 Salinibacter ruber DSM 13855 3850794 YP_446139.1 CDS SRU_2031 NC_007677.1 2515334 2516173 D hypothetical protein 2515334..2516173 Salinibacter ruber DSM 13855 3851763 YP_446140.1 CDS SRU_2032 NC_007677.1 2516747 2517133 D hypothetical protein 2516747..2517133 Salinibacter ruber DSM 13855 3850569 YP_446141.1 CDS SRU_2034 NC_007677.1 2517751 2519823 D identified by match to protein family HMM PF00326; match to protein family HMM PF07676; acyl-peptide hydrolase 2517751..2519823 Salinibacter ruber DSM 13855 3850462 YP_446142.1 CDS SRU_2036 NC_007677.1 2520369 2520956 D identified by match to protein family HMM PF02469; fasciclin domain-containing protein 2520369..2520956 Salinibacter ruber DSM 13855 3851357 YP_446143.1 CDS SRU_2037 NC_007677.1 2521074 2521832 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 2521074..2521832 Salinibacter ruber DSM 13855 3851913 YP_446144.1 CDS SRU_2038 NC_007677.1 2521943 2523487 D identified by match to protein family HMM PF04244; deoxyribodipyrimidine photolyase-like protein 2521943..2523487 Salinibacter ruber DSM 13855 3852862 YP_446145.1 CDS SRU_2039 NC_007677.1 2523867 2524820 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; cysteine synthase B 2523867..2524820 Salinibacter ruber DSM 13855 3852761 YP_446146.1 CDS SRU_2040 NC_007677.1 2524966 2525403 D identified by match to protein family HMM PF01398; Mov34/MPN/PAD-1 family protein 2524966..2525403 Salinibacter ruber DSM 13855 3852613 YP_446147.1 CDS SRU_2041 NC_007677.1 2525463 2525756 D identified by match to protein family HMM PF02597; ThiS family protein 2525463..2525756 Salinibacter ruber DSM 13855 3852048 YP_446148.1 CDS SRU_2042 NC_007677.1 2525937 2527154 D identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237; MoeZ/MoeB domain-contain protein 2525937..2527154 Salinibacter ruber DSM 13855 3852137 YP_446149.1 CDS SRU_2043 NC_007677.1 2527280 2527714 R hypothetical protein complement(2527280..2527714) Salinibacter ruber DSM 13855 3852378 YP_446150.1 CDS valS NC_007677.1 2528211 2530916 R identified by match to protein family HMM PF00133; match to protein family HMM TIGR00422; valyl-tRNA synthetase complement(2528211..2530916) Salinibacter ruber DSM 13855 3850920 YP_446151.1 CDS SRU_2045 NC_007677.1 2531186 2531839 D identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023; iron dependent repressor 2531186..2531839 Salinibacter ruber DSM 13855 3852670 YP_446152.1 CDS SRU_2046 NC_007677.1 2531858 2533378 D hypothetical protein 2531858..2533378 Salinibacter ruber DSM 13855 3850613 YP_446153.1 CDS SRU_2047 NC_007677.1 2533391 2533813 R hypothetical protein complement(2533391..2533813) Salinibacter ruber DSM 13855 3852918 YP_446154.1 CDS SRU_2048 NC_007677.1 2533847 2536675 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component system sensory/regulatory protein complement(2533847..2536675) Salinibacter ruber DSM 13855 3852414 YP_446155.1 CDS SRU_2049 NC_007677.1 2537129 2537884 R hypothetical protein complement(2537129..2537884) Salinibacter ruber DSM 13855 3850644 YP_446156.1 CDS SRU_2050 NC_007677.1 2538153 2538356 R hypothetical protein complement(2538153..2538356) Salinibacter ruber DSM 13855 3851745 YP_446157.1 CDS SRU_2051 NC_007677.1 2538506 2539006 R hypothetical protein complement(2538506..2539006) Salinibacter ruber DSM 13855 3852152 YP_446158.1 CDS SRU_2052 NC_007677.1 2539014 2540297 R hypothetical protein complement(2539014..2540297) Salinibacter ruber DSM 13855 3851605 YP_446159.1 CDS SRU_2053 NC_007677.1 2541096 2541716 D hypothetical protein 2541096..2541716 Salinibacter ruber DSM 13855 3851846 YP_446160.1 CDS SRU_2054 NC_007677.1 2541809 2542618 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(2541809..2542618) Salinibacter ruber DSM 13855 3851529 YP_446161.1 CDS SRU_2055 NC_007677.1 2542705 2543331 R hypothetical protein complement(2542705..2543331) Salinibacter ruber DSM 13855 3851703 YP_446162.1 CDS SRU_2056 NC_007677.1 2543446 2543802 R identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II complement(2543446..2543802) Salinibacter ruber DSM 13855 3852348 YP_446163.1 CDS SRU_2057 NC_007677.1 2543854 2546307 R hypothetical protein complement(2543854..2546307) Salinibacter ruber DSM 13855 3852141 YP_446164.1 CDS SRU_2058 NC_007677.1 2546297 2547736 R identified by match to protein family HMM PF00361; NADH dehydrogenase complement(2546297..2547736) Salinibacter ruber DSM 13855 3852603 YP_446165.1 CDS SRU_2059 NC_007677.1 2548540 2549310 R identified by match to protein family HMM PF00226; DnaJ domain-containing protein complement(2548540..2549310) Salinibacter ruber DSM 13855 3852749 YP_446166.1 CDS crtI NC_007677.1 2549320 2550930 R identified by match to protein family HMM PF01266; match to protein family HMM PF01593; phytoene dehydrogenase complement(2549320..2550930) Salinibacter ruber DSM 13855 3851266 YP_446167.1 CDS SRU_2061 NC_007677.1 2551069 2551872 R hypothetical protein complement(2551069..2551872) Salinibacter ruber DSM 13855 3852778 YP_446168.1 CDS SRU_2062 NC_007677.1 2552102 2554819 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kianse/response regulator complement(2552102..2554819) Salinibacter ruber DSM 13855 3852597 YP_446169.1 CDS aroC NC_007677.1 2555036 2556250 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(2555036..2556250) Salinibacter ruber DSM 13855 3851216 YP_446170.1 CDS SRU_2064 NC_007677.1 2556331 2557875 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; protease degQ complement(2556331..2557875) Salinibacter ruber DSM 13855 3850751 YP_446171.1 CDS SRU_2065 NC_007677.1 2558088 2561318 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07495; two-component system sensor histidine kinase/response regulator, hybrid complement(2558088..2561318) Salinibacter ruber DSM 13855 3851652 YP_446172.1 CDS SRU_2067 NC_007677.1 2562003 2562926 D identified by match to protein family HMM PF00850; histone deacetylase/AcuC/AphA family protein 2562003..2562926 Salinibacter ruber DSM 13855 3851557 YP_446173.1 CDS hemK NC_007677.1 2562919 2563830 R identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; hemK protein complement(2562919..2563830) Salinibacter ruber DSM 13855 3852660 YP_446174.1 CDS SRU_2068 NC_007677.1 2563869 2564156 R identified by match to protein family HMM PF00708; acylphosphatase complement(2563869..2564156) Salinibacter ruber DSM 13855 3850666 YP_446175.1 CDS phhA NC_007677.1 2564321 2565157 R phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase complement(2564321..2565157) Salinibacter ruber DSM 13855 3851276 YP_446176.1 CDS SRU_2070 NC_007677.1 2565341 2565553 R ABC transporter permease complement(2565341..2565553) Salinibacter ruber DSM 13855 3851344 YP_446177.1 CDS SRU_2071 NC_007677.1 2565633 2566232 R hypothetical protein complement(2565633..2566232) Salinibacter ruber DSM 13855 3852073 YP_446178.1 CDS nadD NC_007677.1 2566376 2566963 R identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(2566376..2566963) Salinibacter ruber DSM 13855 3852730 YP_446179.1 CDS SRU_2073 NC_007677.1 2566993 2567847 R hypothetical protein complement(2566993..2567847) Salinibacter ruber DSM 13855 3850767 YP_446180.1 CDS SRU_2074 NC_007677.1 2568015 2569709 R hypothetical protein complement(2568015..2569709) Salinibacter ruber DSM 13855 3852966 YP_446181.1 CDS guaA NC_007677.1 2569790 2571370 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2569790..2571370) Salinibacter ruber DSM 13855 3851256 YP_446182.1 CDS gcvH NC_007677.1 2571488 2571862 R identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein complement(2571488..2571862) Salinibacter ruber DSM 13855 3850930 YP_446183.1 CDS coaD NC_007677.1 2572023 2572517 R identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase complement(2572023..2572517) Salinibacter ruber DSM 13855 3851952 YP_446184.1 CDS SRU_2078 NC_007677.1 2572552 2573166 R identified by match to protein family HMM PF01170; match to protein family HMM PF03602; hypothetical protein complement(2572552..2573166) Salinibacter ruber DSM 13855 3853177 YP_446185.1 CDS SRU_2079 NC_007677.1 2573315 2574283 R hypothetical protein complement(2573315..2574283) Salinibacter ruber DSM 13855 3850743 YP_446186.1 CDS pdxJ NC_007677.1 2575007 2575738 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2575007..2575738 Salinibacter ruber DSM 13855 3851792 YP_446187.1 CDS era NC_007677.1 2575776 2576690 D identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650; GTP-binding protein Era 2575776..2576690 Salinibacter ruber DSM 13855 3850690 YP_446188.1 CDS pdxB NC_007677.1 2576703 2577881 R identified by match to protein family HMM PF00389; match to protein family HMM PF02826; erythronate-4-phosphate dehydrogenase complement(2576703..2577881) Salinibacter ruber DSM 13855 3851421 YP_446189.1 CDS SRU_2083 NC_007677.1 2578228 2578959 D hypothetical protein 2578228..2578959 Salinibacter ruber DSM 13855 3852479 YP_446190.1 CDS SRU_2084 NC_007677.1 2579052 2579693 R hypothetical protein complement(2579052..2579693) Salinibacter ruber DSM 13855 3852920 YP_446191.1 CDS SRU_2085 NC_007677.1 2580063 2581211 D identified by match to protein family HMM PF00534; glycoside hydrolase 2580063..2581211 Salinibacter ruber DSM 13855 3850451 YP_446192.1 CDS SRU_2086 NC_007677.1 2581222 2581872 R identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2581222..2581872) Salinibacter ruber DSM 13855 3852359 YP_446193.1 CDS SRU_2087 NC_007677.1 2582046 2583467 D identified by match to protein family HMM PF03739; hypothetical protein 2582046..2583467 Salinibacter ruber DSM 13855 3850578 YP_446194.1 CDS SRU_2088 NC_007677.1 2583516 2584184 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 2583516..2584184 Salinibacter ruber DSM 13855 3852564 YP_446195.1 CDS SRU_2089 NC_007677.1 2584366 2584905 D hypothetical protein 2584366..2584905 Salinibacter ruber DSM 13855 3850802 YP_446196.1 CDS SRU_2090 NC_007677.1 2584988 2587924 D hypothetical protein 2584988..2587924 Salinibacter ruber DSM 13855 3852289 YP_446197.1 CDS cspa NC_007677.1 2588205 2588537 D identified by match to protein family HMM PF00313; hypothetical protein 2588205..2588537 Salinibacter ruber DSM 13855 3852618 YP_446198.1 CDS SRU_2092 NC_007677.1 2588577 2589050 D identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 2588577..2589050 Salinibacter ruber DSM 13855 3852578 YP_446199.1 CDS yfiA NC_007677.1 2589151 2589549 D identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 2589151..2589549 Salinibacter ruber DSM 13855 3851501 YP_446200.1 CDS metF NC_007677.1 2589658 2590617 R identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase complement(2589658..2590617) Salinibacter ruber DSM 13855 3852395 YP_446201.1 CDS SRU_2095 NC_007677.1 2590710 2591321 D bifunctional 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 2590710..2591321 Salinibacter ruber DSM 13855 3850683 YP_446202.1 CDS SRU_2096 NC_007677.1 2591341 2591706 R hypothetical protein complement(2591341..2591706) Salinibacter ruber DSM 13855 3850556 YP_446203.1 CDS SRU_2097 NC_007677.1 2591793 2592242 R identified by match to protein family HMM TIGR02229; CAA(3)-type oxidase subunit IV complement(2591793..2592242) Salinibacter ruber DSM 13855 3853054 YP_446204.1 CDS SRU_2098 NC_007677.1 2592309 2593010 R hypothetical protein complement(2592309..2593010) Salinibacter ruber DSM 13855 3852046 YP_446205.1 CDS coxA1 NC_007677.1 2593052 2594797 R identified by similarity to GB:CAC08532.1; match to protein family HMM PF00115; cytochrome oxidase subunit I complement(2593052..2594797) Salinibacter ruber DSM 13855 3851036 YP_446206.1 CDS coxB1 NC_007677.1 2594880 2595827 R identified by match to protein family HMM PF00034; match to protein family HMM PF00116; cytochrome oxidase subunit II complement(2594880..2595827) Salinibacter ruber DSM 13855 3853042 YP_446207.1 CDS SRU_2101 NC_007677.1 2595939 2596682 R hypothetical protein complement(2595939..2596682) Salinibacter ruber DSM 13855 3852611 YP_446208.1 CDS SRU_2102 NC_007677.1 2596818 2597957 R molybdopterin oxidoreductase membrane subunit complement(2596818..2597957) Salinibacter ruber DSM 13855 3851662 YP_446209.1 CDS SRU_2103 NC_007677.1 2598178 2598882 R hypothetical protein complement(2598178..2598882) Salinibacter ruber DSM 13855 3852804 YP_446210.1 CDS SRU_2104 NC_007677.1 2598882 2599487 R hypothetical protein complement(2598882..2599487) Salinibacter ruber DSM 13855 3852849 YP_446211.1 CDS SRU_2105 NC_007677.1 2599547 2600944 R identified by match to protein family HMM PF03916; polysulfide reductase chain C complement(2599547..2600944) Salinibacter ruber DSM 13855 3851106 YP_446212.1 CDS SRU_2106 NC_007677.1 2601117 2604539 R identified by match to protein family HMM PF00037; molybdopterin oxidoreductase, iron-sulfur binding subunit complement(2601117..2604539) Salinibacter ruber DSM 13855 3853004 YP_446213.1 CDS SRU_2107 NC_007677.1 2604653 2605306 R hypothetical protein complement(2604653..2605306) Salinibacter ruber DSM 13855 3850657 YP_446214.1 CDS SRU_2108 NC_007677.1 2606443 2608809 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor complement(2606443..2608809) Salinibacter ruber DSM 13855 3851021 YP_446215.1 CDS msrB NC_007677.1 2609519 2610076 D identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2609519..2610076 Salinibacter ruber DSM 13855 3853116 YP_446216.1 CDS SRU_2110 NC_007677.1 2610106 2610510 R hypothetical protein complement(2610106..2610510) Salinibacter ruber DSM 13855 3851006 YP_446217.1 CDS SRU_2111 NC_007677.1 2610801 2611940 D identified by match to protein family HMM PF00365; phosphofructokinase subfamily protein 2610801..2611940 Salinibacter ruber DSM 13855 3852816 YP_446218.1 CDS SRU_2112 NC_007677.1 2611855 2613144 D identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 2611855..2613144 Salinibacter ruber DSM 13855 3850402 YP_446219.1 CDS SRU_2113 NC_007677.1 2613492 2614268 D identified by match to protein family HMM PF02591; hypothetical protein 2613492..2614268 Salinibacter ruber DSM 13855 3852774 YP_446220.1 CDS SRU_2114 NC_007677.1 2614939 2615322 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; protein-export membrane protein complement(2614939..2615322) Salinibacter ruber DSM 13855 3851779 YP_446221.1 CDS SRU_2115 NC_007677.1 2615393 2616022 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(2615393..2616022) Salinibacter ruber DSM 13855 3852077 YP_446222.1 CDS SRU_2116 NC_007677.1 2616772 2617491 R identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein complement(2616772..2617491) Salinibacter ruber DSM 13855 3851102 YP_446223.1 CDS SRU_2117 NC_007677.1 2617579 2619390 R identified by match to protein family HMM PF01103; OMP85 family outer membrane protein complement(2617579..2619390) Salinibacter ruber DSM 13855 3852955 YP_446224.1 CDS SRU_2118 NC_007677.1 2619389 2619793 D hypothetical protein 2619389..2619793 Salinibacter ruber DSM 13855 3850612 YP_446225.1 CDS mutY NC_007677.1 2619971 2621035 D identified by match to protein family HMM PF00293; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 2619971..2621035 Salinibacter ruber DSM 13855 3851987 YP_446226.1 CDS SRU_2120 NC_007677.1 2621691 2622221 R hypothetical protein complement(2621691..2622221) Salinibacter ruber DSM 13855 3850885 YP_446227.1 CDS groS NC_007677.1 2622459 2622749 D identified by match to protein family HMM PF00166; chaperonin, 10 kDa 2622459..2622749 Salinibacter ruber DSM 13855 3852179 YP_446228.1 CDS groEL NC_007677.1 2622845 2624527 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 2622845..2624527 Salinibacter ruber DSM 13855 3852549 YP_446229.1 CDS SRU_2123 NC_007677.1 2624687 2627437 R identified by match to protein family HMM PF00583; match to protein family HMM PF02629; acetyltransferase complement(2624687..2627437) Salinibacter ruber DSM 13855 3850866 YP_446230.1 CDS SRU_2124 NC_007677.1 2627720 2627920 D hypothetical protein 2627720..2627920 Salinibacter ruber DSM 13855 3851363 YP_446231.1 CDS SRU_2125 NC_007677.1 2628029 2629552 R identified by match to protein family HMM PF01935; hypothetical protein complement(2628029..2629552) Salinibacter ruber DSM 13855 3850821 YP_446232.1 CDS SRU_2126 NC_007677.1 2630197 2631306 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM protein complement(2630197..2631306) Salinibacter ruber DSM 13855 3852550 YP_446233.1 CDS hisD NC_007677.1 2631543 2633009 D identified by match to protein family HMM PF00815; match to protein family HMM TIGR00069; histidinol dehydrogenase 2631543..2633009 Salinibacter ruber DSM 13855 3851392 YP_446234.1 CDS hisC NC_007677.1 2633151 2634215 D identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate aminotransferase 2633151..2634215 Salinibacter ruber DSM 13855 3851857 YP_446235.1 CDS SRU_2129 NC_007677.1 2634366 2634899 D identified by match to protein family HMM PF02151; match to protein family HMM PF02577; hypothetical protein 2634366..2634899 Salinibacter ruber DSM 13855 3852686 YP_446236.1 CDS SRU_2130 NC_007677.1 2634976 2636703 D hypothetical protein 2634976..2636703 Salinibacter ruber DSM 13855 3850343 YP_446237.1 CDS SRU_2132 NC_007677.1 2636765 2637610 D identified by match to protein family HMM PF01966; HD domain-containing protein 2636765..2637610 Salinibacter ruber DSM 13855 3853082 YP_446238.1 CDS deoD NC_007677.1 2637483 2638271 R identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; purine nucleoside phosphorylase complement(2637483..2638271) Salinibacter ruber DSM 13855 3852369 YP_446239.1 CDS SRU_2133 NC_007677.1 2638446 2639687 R identified by match to protein family HMM PF01594; hypothetical protein complement(2638446..2639687) Salinibacter ruber DSM 13855 3853056 YP_446240.1 CDS recX NC_007677.1 2639760 2640428 R identified by match to protein family HMM PF02631; regulatory protein RecX complement(2639760..2640428) Salinibacter ruber DSM 13855 3852534 YP_446241.1 CDS SRU_2135 NC_007677.1 2640544 2641437 R hypothetical protein complement(2640544..2641437) Salinibacter ruber DSM 13855 3850908 YP_446242.1 CDS SRU_2136 NC_007677.1 2641556 2644141 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein complement(2641556..2644141) Salinibacter ruber DSM 13855 3851796 YP_446243.1 CDS SRU_2137 NC_007677.1 2644331 2645533 R identified by match to protein family HMM PF04773; sigma factor regulatory protein FecR/PupR family complement(2644331..2645533) Salinibacter ruber DSM 13855 3851845 YP_446244.1 CDS SRU_2138 NC_007677.1 2645672 2646226 R identified by match to protein family HMM PF04542; RNA polymerase sigma factor complement(2645672..2646226) Salinibacter ruber DSM 13855 3852484 YP_446245.1 CDS SRU_2139 NC_007677.1 2646526 2646810 D hypothetical protein 2646526..2646810 Salinibacter ruber DSM 13855 3852459 YP_446246.1 CDS rlpA NC_007677.1 2646943 2647566 R identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A complement(2646943..2647566) Salinibacter ruber DSM 13855 3851920 YP_446247.1 CDS SRU_2141 NC_007677.1 2647549 2647827 D identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2647549..2647827 Salinibacter ruber DSM 13855 3851536 YP_446248.1 CDS SRU_2143 NC_007677.1 2648544 2651048 D identified by match to protein family HMM PF01578; cytochrome c biogenesis factor 2648544..2651048 Salinibacter ruber DSM 13855 3852899 YP_446249.1 CDS SRU_2144 NC_007677.1 2651240 2651674 D bacterio-opsin linked protein 2651240..2651674 Salinibacter ruber DSM 13855 3851250 YP_446250.1 CDS ilvB NC_007677.1 2652438 2654228 D identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 2652438..2654228 Salinibacter ruber DSM 13855 3852903 YP_446251.1 CDS SRU_2146 NC_007677.1 2654252 2654974 D identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119; acetolactate synthase small subunit 2654252..2654974 Salinibacter ruber DSM 13855 3851246 YP_446252.1 CDS ilvC NC_007677.1 2655058 2656104 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2655058..2656104 Salinibacter ruber DSM 13855 3853037 YP_446253.1 CDS leuB NC_007677.1 2656040 2657278 D identified by match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 2656040..2657278 Salinibacter ruber DSM 13855 3852711 YP_446254.1 CDS leuA NC_007677.1 2657454 2659094 D identified by match to protein family HMM PF00682; match to protein family HMM TIGR00973; 2-isopropylmalate synthase 2657454..2659094 Salinibacter ruber DSM 13855 3852083 YP_446255.1 CDS leuC NC_007677.1 2659227 2660645 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2659227..2660645 Salinibacter ruber DSM 13855 3851488 YP_446256.1 CDS SRU_2151 NC_007677.1 2660653 2661135 R hypothetical protein complement(2660653..2661135) Salinibacter ruber DSM 13855 3852216 YP_446257.1 CDS leuD NC_007677.1 2661190 2661807 D identified by match to protein family HMM PF00694; match to protein family HMM TIGR00171; 3-isopropylmalate dehydratase small subunit 2661190..2661807 Salinibacter ruber DSM 13855 3851556 YP_446258.1 CDS ilvD NC_007677.1 2661829 2663667 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2661829..2663667 Salinibacter ruber DSM 13855 3852394 YP_446259.1 CDS SRU_2154 NC_007677.1 2663716 2665374 D identified by match to protein family HMM PF00682; match to protein family HMM TIGR00977; alpha-isopropylmalate/homocitrate synthase family transferase 2663716..2665374 Salinibacter ruber DSM 13855 3850822 YP_446260.1 CDS SRU_2155 NC_007677.1 2665377 2665913 R hypothetical protein complement(2665377..2665913) Salinibacter ruber DSM 13855 3850353 YP_446261.1 CDS SRU_2156 NC_007677.1 2665953 2666231 R hypothetical protein complement(2665953..2666231) Salinibacter ruber DSM 13855 3850455 YP_446262.1 CDS SRU_2157 NC_007677.1 2666312 2667235 D identified by match to protein family HMM PF00085; thioredoxin 2666312..2667235 Salinibacter ruber DSM 13855 3852317 YP_446263.1 CDS SRU_2158 NC_007677.1 2667238 2667687 D identified by match to protein family HMM PF03061; thioesterase 2667238..2667687 Salinibacter ruber DSM 13855 3852643 YP_446264.1 CDS SRU_2159 NC_007677.1 2667689 2668813 R identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(2667689..2668813) Salinibacter ruber DSM 13855 3852040 YP_446265.1 CDS mtap NC_007677.1 2668817 2669608 R identified by match to protein family HMM PF00896; 5'-methylthioadenosine phosphorylase complement(2668817..2669608) Salinibacter ruber DSM 13855 3852343 YP_446266.1 CDS SRU_2161 NC_007677.1 2669758 2672700 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein complement(2669758..2672700) Salinibacter ruber DSM 13855 3851424 YP_446267.1 CDS SRU_2162 NC_007677.1 2673062 2673667 R hypothetical protein complement(2673062..2673667) Salinibacter ruber DSM 13855 3851734 YP_446268.1 CDS SRU_2163 NC_007677.1 2673945 2675867 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2673945..2675867) Salinibacter ruber DSM 13855 3852746 YP_446269.1 CDS rnz NC_007677.1 2675919 2676887 R identified by match to protein family HMM PF00753; match to protein family HMM TIGR02651; ribonuclease Z complement(2675919..2676887) Salinibacter ruber DSM 13855 3851849 YP_446270.1 CDS SRU_2165 NC_007677.1 2677005 2678873 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2677005..2678873) Salinibacter ruber DSM 13855 3850625 YP_446271.1 CDS SRU_2166 NC_007677.1 2679061 2679753 R identified by match to protein family HMM PF00027; Crp family transcriptional regulator complement(2679061..2679753) Salinibacter ruber DSM 13855 3851694 YP_446272.1 CDS SRU_2167 NC_007677.1 2679769 2682477 R identified by match to protein family HMM PF01103; OMP85 family outer membrane protein complement(2679769..2682477) Salinibacter ruber DSM 13855 3850853 YP_446273.1 CDS SRU_2168 NC_007677.1 2682543 2683601 R identified by match to protein family HMM PF01551; peptidase complement(2682543..2683601) Salinibacter ruber DSM 13855 3851211 YP_446274.2 CDS SRU_2169 NC_007677.1 2683899 2684876 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2683899..2684876) Salinibacter ruber DSM 13855 3851535 YP_446275.1 CDS SRU_2170 NC_007677.1 2684983 2685978 R identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase complement(2684983..2685978) Salinibacter ruber DSM 13855 3850374 YP_446276.1 CDS fmt NC_007677.1 2686024 2686947 R identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase complement(2686024..2686947) Salinibacter ruber DSM 13855 3852995 YP_446277.1 CDS ftsY NC_007677.1 2687022 2687996 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(2687022..2687996) Salinibacter ruber DSM 13855 3851790 YP_446278.1 CDS SRU_2173 NC_007677.1 2688041 2688643 R identified by match to protein family HMM PF01066; phosphatidylglycerophosphate synthase complement(2688041..2688643) Salinibacter ruber DSM 13855 3852363 YP_446279.1 CDS SRU_2174 NC_007677.1 2688890 2689801 R hypothetical protein complement(2688890..2689801) Salinibacter ruber DSM 13855 3852466 YP_446280.1 CDS SRU_2175 NC_007677.1 2689856 2692186 R identified by similarity to OMNI:PINA0872; match to protein family HMM PF07715; TonB dependent receptor domain-containing protein complement(2689856..2692186) Salinibacter ruber DSM 13855 3852855 YP_446281.1 CDS SRU_2176 NC_007677.1 2693199 2694422 R identified by match to protein family HMM PF02469; fasciclin domain-containing protein complement(2693199..2694422) Salinibacter ruber DSM 13855 3851717 YP_446282.1 CDS SRU_2177 NC_007677.1 2694533 2696170 R hypothetical protein complement(2694533..2696170) Salinibacter ruber DSM 13855 3850824 YP_446283.1 CDS SRU_2178 NC_007677.1 2696272 2699586 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(2696272..2699586) Salinibacter ruber DSM 13855 3852169 YP_446284.1 CDS SRU_2179 NC_007677.1 2700112 2700444 R identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; 6-O-methylguanine DNA methyltransferase complement(2700112..2700444) Salinibacter ruber DSM 13855 3850363 YP_446285.1 CDS SRU_2180 NC_007677.1 2700480 2702675 R hypothetical protein complement(2700480..2702675) Salinibacter ruber DSM 13855 3852340 YP_446286.1 CDS SRU_2181 NC_007677.1 2703590 2705173 R identified by match to protein family HMM PF07980; hypothetical protein complement(2703590..2705173) Salinibacter ruber DSM 13855 3851963 YP_446287.1 CDS SRU_2182 NC_007677.1 2705221 2708286 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(2705221..2708286) Salinibacter ruber DSM 13855 3853055 YP_446288.1 CDS SRU_2183 NC_007677.1 2708826 2709212 R identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; 6-O-methylguanine DNA methyltransferase complement(2708826..2709212) Salinibacter ruber DSM 13855 3852068 YP_446289.1 CDS murB NC_007677.1 2709327 2710484 D identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylenolpyruvoylglucosamine reductase 2709327..2710484 Salinibacter ruber DSM 13855 3852968 YP_446290.1 CDS SRU_2185 NC_007677.1 2710714 2711460 D transposase 2710714..2711460 Salinibacter ruber DSM 13855 3852283 YP_446291.1 CDS SRU_2186 NC_007677.1 2711913 2712167 D hypothetical protein 2711913..2712167 Salinibacter ruber DSM 13855 3852502 YP_446292.1 CDS SRU_2187 NC_007677.1 2712574 2713551 R identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase complement(2712574..2713551) Salinibacter ruber DSM 13855 3851377 YP_446293.1 CDS SRU_2188 NC_007677.1 2713624 2714373 D heme exporter, protein B 2713624..2714373 Salinibacter ruber DSM 13855 3851197 YP_446294.1 CDS SRU_2189 NC_007677.1 2714479 2715231 D identified by match to protein family HMM PF01578; heme exporter protein C 2714479..2715231 Salinibacter ruber DSM 13855 3850677 YP_446295.1 CDS SRU_2190 NC_007677.1 2715212 2715571 D hypothetical protein 2715212..2715571 Salinibacter ruber DSM 13855 3851068 YP_446296.1 CDS SRU_2191 NC_007677.1 2715599 2716030 D cytochrome c-type biogenesis protein CcmE 2715599..2716030 Salinibacter ruber DSM 13855 3851942 YP_446297.1 CDS SRU_2192 NC_007677.1 2716041 2716478 D hypothetical protein 2716041..2716478 Salinibacter ruber DSM 13855 3851307 YP_446298.1 CDS mgtE NC_007677.1 2716523 2717941 R identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter complement(2716523..2717941) Salinibacter ruber DSM 13855 3850917 YP_446299.1 CDS ksgA NC_007677.1 2718012 2718902 R identified by match to protein family HMM PF00398; match to protein family HMM PF05175; match to protein family HMM TIGR00755; dimethyladenosine transferase complement(2718012..2718902) Salinibacter ruber DSM 13855 3851872 YP_446300.1 CDS SRU_2195 NC_007677.1 2718921 2720027 R hypothetical protein complement(2718921..2720027) Salinibacter ruber DSM 13855 3852099 YP_446301.1 CDS SRU_2196 NC_007677.1 2720162 2721391 R hypothetical protein complement(2720162..2721391) Salinibacter ruber DSM 13855 3850726 YP_446302.1 CDS SRU_2197 NC_007677.1 2721540 2722844 R identified by match to protein family HMM PF01820; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine--D-alanine ligase complement(2721540..2722844) Salinibacter ruber DSM 13855 3852328 YP_446303.1 CDS SRU_2198 NC_007677.1 2722917 2724209 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; amidohydrolase complement(2722917..2724209) Salinibacter ruber DSM 13855 3851134 YP_446304.1 CDS gyrA NC_007677.1 2724446 2727178 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 2724446..2727178 Salinibacter ruber DSM 13855 3850411 YP_446305.1 CDS SRU_2200 NC_007677.1 2727228 2730023 R identified by match to protein family HMM PF00041; fibronectin type III domain-containing protein complement(2727228..2730023) Salinibacter ruber DSM 13855 3851802 YP_446306.1 CDS SRU_2201 NC_007677.1 2730287 2730952 R hypothetical protein complement(2730287..2730952) Salinibacter ruber DSM 13855 3851051 YP_446307.1 CDS SRU_2202 NC_007677.1 2731208 2732626 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phospho-sugar mutase 2731208..2732626 Salinibacter ruber DSM 13855 3851412 YP_446308.1 CDS SRU_2203 NC_007677.1 2732735 2734462 D identified by match to protein family HMM PF00657; GDSL-like lipase/acylhydrolase domain-containing protein 2732735..2734462 Salinibacter ruber DSM 13855 3852467 YP_446309.1 CDS SRU_2204 NC_007677.1 2734502 2735929 R identified by match to protein family HMM PF02233; NAD(P) transhydrogenase beta subunit complement(2734502..2735929) Salinibacter ruber DSM 13855 3852777 YP_446310.1 CDS SRU_2205 NC_007677.1 2736074 2736394 R hypothetical protein complement(2736074..2736394) Salinibacter ruber DSM 13855 3851687 YP_446311.1 CDS SRU_2206 NC_007677.1 2736572 2737729 R identified by match to protein family HMM PF01262; match to protein family HMM PF05222; NAD(P) transhydrogenase subunit alpha complement(2736572..2737729) Salinibacter ruber DSM 13855 3851130 YP_446312.1 CDS serC NC_007677.1 2737825 2738934 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2737825..2738934) Salinibacter ruber DSM 13855 3851973 YP_446313.1 CDS SRU_2208 NC_007677.1 2739292 2739777 R identified by similarity to SP:O52980; match to protein family HMM PF00254; FKBP-type peptidyl-prolyl cis-trans isomerase complement(2739292..2739777) Salinibacter ruber DSM 13855 3852313 YP_446314.1 CDS SRU_2209 NC_007677.1 2740042 2740581 D identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 2740042..2740581 Salinibacter ruber DSM 13855 3851410 YP_446315.1 CDS SRU_2210 NC_007677.1 2740668 2741636 R hypothetical protein complement(2740668..2741636) Salinibacter ruber DSM 13855 3851047 YP_446316.1 CDS ndh NC_007677.1 2742074 2743429 D identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF07992; NADH dehydrogenase 2742074..2743429 Salinibacter ruber DSM 13855 3852189 YP_446317.1 CDS SRU_2212 NC_007677.1 2743511 2744032 D hypothetical protein 2743511..2744032 Salinibacter ruber DSM 13855 3850986 YP_446318.1 CDS SRU_2213 NC_007677.1 2744259 2744792 R identified by match to protein family HMM PF05685; hypothetical protein complement(2744259..2744792) Salinibacter ruber DSM 13855 3852291 YP_446319.1 CDS argG NC_007677.1 2745512 2746753 D identified by match to protein family HMM PF00764; match to protein family HMM TIGR00032; argininosuccinate synthase 2745512..2746753 Salinibacter ruber DSM 13855 3851119 YP_446320.1 CDS SRU_2215 NC_007677.1 2746807 2747940 D hypothetical protein 2746807..2747940 Salinibacter ruber DSM 13855 3852832 YP_446321.1 CDS argC NC_007677.1 2748091 2749152 D identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850; N-acetyl-gamma-glutamyl-phosphate reductase 2748091..2749152 Salinibacter ruber DSM 13855 3852006 YP_446322.1 CDS SRU_2217 NC_007677.1 2749223 2750410 D identified by match to protein family HMM PF00202; aminotransferase 2749223..2750410 Salinibacter ruber DSM 13855 3850557 YP_446323.1 CDS SRU_2218 NC_007677.1 2750481 2751539 D catalyzes the conversion of N-acetylornithine to N-acetylcitrulline in an alternative arginine biosynthesis pathway; N-acetylornithine carbamoyltransferase 2750481..2751539 Salinibacter ruber DSM 13855 3851441 YP_446324.1 CDS argB NC_007677.1 2751673 2752476 D identified by similarity to SP:P36840; match to protein family HMM PF00696; match to protein family HMM TIGR00761; acetylglutamate kinase 2751673..2752476 Salinibacter ruber DSM 13855 3850847 YP_446325.1 CDS SRU_2220 NC_007677.1 2752611 2753696 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; M20A family peptidase 2752611..2753696 Salinibacter ruber DSM 13855 3852056 YP_446326.1 CDS argH NC_007677.1 2753764 2755077 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2753764..2755077 Salinibacter ruber DSM 13855 3853057 YP_446327.1 CDS SRU_2222 NC_007677.1 2755091 2755888 R identified by match to protein family HMM PF03741; TerC family integral membrane protein complement(2755091..2755888) Salinibacter ruber DSM 13855 3852500 YP_446328.1 CDS SRU_2223 NC_007677.1 2756076 2756519 R hypothetical protein complement(2756076..2756519) Salinibacter ruber DSM 13855 3852833 YP_446329.1 CDS SRU_2224 NC_007677.1 2756874 2757344 D photoactive yellow protein 2756874..2757344 Salinibacter ruber DSM 13855 3851003 YP_446330.1 CDS SRU_2225 NC_007677.1 2757357 2760215 R identified by match to protein family HMM PF03699; hypothetical protein complement(2757357..2760215) Salinibacter ruber DSM 13855 3853022 YP_446331.1 CDS SRU_2226 NC_007677.1 2760833 2761084 D hypothetical protein 2760833..2761084 Salinibacter ruber DSM 13855 3852756 YP_446332.1 CDS SRU_2227 NC_007677.1 2761234 2762010 D hypothetical protein 2761234..2762010 Salinibacter ruber DSM 13855 3851850 YP_446333.1 CDS SRU_2228 NC_007677.1 2762042 2763052 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(2762042..2763052) Salinibacter ruber DSM 13855 3852604 YP_446334.1 CDS SRU_2229 NC_007677.1 2763100 2764014 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(2763100..2764014) Salinibacter ruber DSM 13855 3852948 YP_446335.1 CDS SRU_2230 NC_007677.1 2764057 2764653 R identified by match to protein family HMM PF01957; nodulation efficiency protein D (NfeD) complement(2764057..2764653) Salinibacter ruber DSM 13855 3852743 YP_446336.1 CDS SRU_2231 NC_007677.1 2764638 2765597 D identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; YfiH 2764638..2765597 Salinibacter ruber DSM 13855 3851795 YP_446337.1 CDS SRU_2232 NC_007677.1 2765684 2766727 D identified by match to protein family HMM PF00561; alpha/beta hydrolase 2765684..2766727 Salinibacter ruber DSM 13855 3852266 YP_446338.1 CDS recJ NC_007677.1 2766776 2768530 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(2766776..2768530) Salinibacter ruber DSM 13855 3851679 YP_446339.1 CDS rho NC_007677.1 2769096 2770514 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2769096..2770514 Salinibacter ruber DSM 13855 3852233 YP_446340.1 CDS SRU_2235 NC_007677.1 2770568 2773846 D identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM PF07676; MdsD protein 2770568..2773846 Salinibacter ruber DSM 13855 3851431 YP_446341.1 CDS SRU_2236 NC_007677.1 2774011 2774757 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01548; match to protein family HMM TIGR01549; HAD family hydrolase 2774011..2774757 Salinibacter ruber DSM 13855 3852488 YP_446342.1 CDS SRU_2237 NC_007677.1 2774860 2775486 R identified by match to protein family HMM PF00691; OmpA domain-containing protein complement(2774860..2775486) Salinibacter ruber DSM 13855 3851288 YP_446343.1 CDS SRU_2238 NC_007677.1 2775561 2776481 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(2775561..2776481) Salinibacter ruber DSM 13855 3850576 YP_446344.1 CDS SRU_2239 NC_007677.1 2776624 2778402 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; sulfate transporter 2776624..2778402 Salinibacter ruber DSM 13855 3852081 YP_446345.1 CDS SRU_2240 NC_007677.1 2778444 2779115 R hypothetical protein complement(2778444..2779115) Salinibacter ruber DSM 13855 3852969 YP_446346.1 CDS SRU_2241 NC_007677.1 2779114 2779788 D hypothetical protein 2779114..2779788 Salinibacter ruber DSM 13855 3853192 YP_446347.1 CDS SRU_2242 NC_007677.1 2779799 2780137 R identified by match to protein family HMM TIGR02610; polyhydroxyalkanoic acid system protein complement(2779799..2780137) Salinibacter ruber DSM 13855 3853085 YP_446348.1 CDS SRU_2243 NC_007677.1 2780252 2782795 D identified by match to protein family HMM PF00246; zinc-dependent carboxypeptidase domain-containing protein 2780252..2782795 Salinibacter ruber DSM 13855 3851946 YP_446349.1 CDS SRU_2244 NC_007677.1 2782893 2783231 R AsnC family transcriptional regulator complement(2782893..2783231) Salinibacter ruber DSM 13855 3852487 YP_446350.1 CDS SRU_2245 NC_007677.1 2783283 2783585 D identified by match to protein family HMM PF01541; GIY-YIG catalytic domain-containing protein 2783283..2783585 Salinibacter ruber DSM 13855 3851259 YP_446351.1 CDS pccB NC_007677.1 2783598 2785283 R identified by match to protein family HMM PF01039; propionyl-CoA carboxylase subunit beta protein complement(2783598..2785283) Salinibacter ruber DSM 13855 3850675 YP_446352.1 CDS SRU_2247 NC_007677.1 2785583 2786587 D hypothetical protein 2785583..2786587 Salinibacter ruber DSM 13855 3851832 YP_446353.1 CDS SRU_2248 NC_007677.1 2786587 2787990 D identified by match to protein family HMM PF02469; osteoblast specific factor 2-related protein 2786587..2787990 Salinibacter ruber DSM 13855 3853179 YP_446354.1 CDS SRU_2249 NC_007677.1 2788334 2788984 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase ECF-type sigma factor 2788334..2788984 Salinibacter ruber DSM 13855 3851140 YP_446355.1 CDS SRU_2250 NC_007677.1 2789035 2790075 D identified by match to protein family HMM PF04773; transmembrane sensor 2789035..2790075 Salinibacter ruber DSM 13855 3850464 YP_446356.1 CDS SRU_2251 NC_007677.1 2790121 2792934 D identified by match to protein family HMM PF00593; TonB-dependent receptor domain-containing protein 2790121..2792934 Salinibacter ruber DSM 13855 3850886 YP_446357.1 CDS SRU_2252 NC_007677.1 2793118 2793630 D hypothetical protein 2793118..2793630 Salinibacter ruber DSM 13855 3851615 YP_446358.1 CDS susB NC_007677.1 2793717 2795843 R alpha-glucosidase complement(2793717..2795843) Salinibacter ruber DSM 13855 3852810 YP_446359.1 CDS SRU_2254 NC_007677.1 2796458 2796853 R hypothetical protein complement(2796458..2796853) Salinibacter ruber DSM 13855 3850953 YP_446360.1 CDS SRU_2255 NC_007677.1 2797093 2798754 R identified by match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase complement(2797093..2798754) Salinibacter ruber DSM 13855 3852302 YP_446361.1 CDS SRU_2256 NC_007677.1 2798824 2800881 D identified by match to protein family HMM PF00999; match to protein family HMM PF02254; monovalent cation:proton antiporter-2 (CPA2) family protein 2798824..2800881 Salinibacter ruber DSM 13855 3851630 YP_446362.1 CDS SRU_2257 NC_007677.1 2800999 2803446 D identified by match to protein family HMM PF00324; Na-K-Cl cotransporter 2800999..2803446 Salinibacter ruber DSM 13855 3852558 YP_446363.1 CDS cat1 NC_007677.1 2803852 2806194 D identified by similarity to GB:AAV45750.1; match to protein family HMM PF00324; match to protein family HMM PF00582; cationic amino acid transporter 2803852..2806194 Salinibacter ruber DSM 13855 3851550 YP_446364.1 CDS SRU_2259 NC_007677.1 2806267 2808531 D identified by similarity to GB:AAM07846.1; match to protein family HMM PF00324; Na-K-Cl cotransporter 2806267..2808531 Salinibacter ruber DSM 13855 3850827 YP_446365.1 CDS cat2 NC_007677.1 2808610 2809956 D identified by similarity to GB:AAV44781.1; match to protein family HMM PF00324; cationic amino acid transporter 2808610..2809956 Salinibacter ruber DSM 13855 3852658 YP_446366.1 CDS usp12 NC_007677.1 2809953 2810717 D identified by similarity to GB:AAV44780.1; universal stress protein 2809953..2810717 Salinibacter ruber DSM 13855 3851736 YP_446367.1 CDS trkA1 NC_007677.1 2810812 2811474 R identified by similarity to GB:AAV45302.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein complement(2810812..2811474) Salinibacter ruber DSM 13855 3851350 YP_446368.1 CDS cat3 NC_007677.1 2811503 2812864 R identified by match to protein family HMM PF00324; cationic amino acid transporter complement(2811503..2812864) Salinibacter ruber DSM 13855 3851311 YP_446369.1 CDS SRU_2264 NC_007677.1 2813092 2813805 D identified by similarity to PIR:AB2070; hypothetical protein 2813092..2813805 Salinibacter ruber DSM 13855 3850904 YP_446370.1 CDS trkA2 NC_007677.1 2813947 2815581 R identified by similarity to GB:AAV47313.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein complement(2813947..2815581) Salinibacter ruber DSM 13855 3851859 YP_446371.1 CDS trkA3 NC_007677.1 2815779 2816651 R identified by similarity to GB:AAO36760.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk potassium uptake system protein complement(2815779..2816651) Salinibacter ruber DSM 13855 3852078 YP_446372.1 CDS SRU_2267 NC_007677.1 2816729 2817007 D identified by match to protein family HMM TIGR01199; ISSru2, transposase insA 2816729..2817007 Salinibacter ruber DSM 13855 3852825 YP_446373.1 CDS trkH1 NC_007677.1 2817561 2818985 R identified by match to protein family HMM PF02386; TrkH potassium uptake protein complement(2817561..2818985) Salinibacter ruber DSM 13855 3852355 YP_446374.1 CDS trkA NC_007677.1 2819321 2820661 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 2819321..2820661 Salinibacter ruber DSM 13855 3851108 YP_446375.1 CDS trkH2 NC_007677.1 2820658 2822157 D identified by similarity to GB:AAV45748.1; match to protein family HMM PF02386; TrkH potassium uptake protein 2820658..2822157 Salinibacter ruber DSM 13855 3851159 YP_446376.1 CDS SRU_2272 NC_007677.1 2822503 2824131 D identified by match to protein family HMM PF00999; match to protein family HMM PF02254; potassium efflux system protein 2822503..2824131 Salinibacter ruber DSM 13855 3851578 YP_446377.1 CDS SRU_2273 NC_007677.1 2824128 2825705 D identified by match to protein family HMM PF00999; match to protein family HMM PF02254; potassium-efflux system protein 2824128..2825705 Salinibacter ruber DSM 13855 3851060 YP_446378.1 CDS cat4 NC_007677.1 2825819 2828029 D identified by match to protein family HMM PF00324; cationic amino acid transporter 2825819..2828029 Salinibacter ruber DSM 13855 3850617 YP_446379.1 CDS cat5 NC_007677.1 2828198 2830333 D identified by similarity to PIR:F84279; match to protein family HMM PF00324; match to protein family HMM PF02080; cationic amino acid transporter 2828198..2830333 Salinibacter ruber DSM 13855 3851062 YP_446380.1 CDS SRU_2276 NC_007677.1 2830774 2834241 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; PAS domain-containing protein 2830774..2834241 Salinibacter ruber DSM 13855 3850858 YP_446381.1 CDS aroE NC_007677.1 2834406 2835263 D identified by match to protein family HMM PF01488; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase 2834406..2835263 Salinibacter ruber DSM 13855 3851711 YP_446382.1 CDS SRU_2278 NC_007677.1 2835396 2836034 D hypothetical protein 2835396..2836034 Salinibacter ruber DSM 13855 3853122 YP_446383.1 CDS SRU_2279 NC_007677.1 2836079 2836465 D hypothetical protein 2836079..2836465 Salinibacter ruber DSM 13855 3851985 YP_446384.1 CDS SRU_2280 NC_007677.1 2836524 2836946 R redox protein complement(2836524..2836946) Salinibacter ruber DSM 13855 3850995 YP_446385.1 CDS SRU_2281 NC_007677.1 2837048 2837509 R hypothetical protein complement(2837048..2837509) Salinibacter ruber DSM 13855 3850918 YP_446386.1 CDS SRU_2282 NC_007677.1 2837609 2838313 R identified by match to protein family HMM PF00106; 20-beta-hydroxysteroid dehydrogenase complement(2837609..2838313) Salinibacter ruber DSM 13855 3851201 YP_446387.1 CDS SRU_2283 NC_007677.1 2838600 2839082 D identified by match to protein family HMM PF00571; hypothetical protein 2838600..2839082 Salinibacter ruber DSM 13855 3852174 YP_446388.1 CDS SRU_2284 NC_007677.1 2839155 2840996 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(2839155..2840996) Salinibacter ruber DSM 13855 3852923 YP_446389.1 CDS SRU_2285 NC_007677.1 2841695 2842528 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(2841695..2842528) Salinibacter ruber DSM 13855 3850603 YP_446390.1 CDS SRU_2286 NC_007677.1 2842512 2843111 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(2842512..2843111) Salinibacter ruber DSM 13855 3851312 YP_446391.1 CDS ilvA NC_007677.1 2843185 2844597 D catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 2843185..2844597 Salinibacter ruber DSM 13855 3851270 YP_446392.1 CDS SRU_2288 NC_007677.1 2844943 2845227 D hypothetical protein 2844943..2845227 Salinibacter ruber DSM 13855 3850914 YP_446393.1 CDS SRU_2289 NC_007677.1 2845247 2847598 D identified by match to protein family HMM PF00271; match to protein family HMM PF01844; match to protein family HMM PF04851; helicase 2845247..2847598 Salinibacter ruber DSM 13855 3852852 YP_446394.1 CDS SRU_2290 NC_007677.1 2847602 2848471 D hypothetical protein 2847602..2848471 Salinibacter ruber DSM 13855 3851005 YP_446395.1 CDS SRU_2291 NC_007677.1 2848488 2849804 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(2848488..2849804) Salinibacter ruber DSM 13855 3851773 YP_446396.1 CDS drrA NC_007677.1 2850392 2851102 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 2850392..2851102 Salinibacter ruber DSM 13855 3850728 YP_446397.1 CDS pstS NC_007677.1 2851205 2852272 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate ABC transporter substrate-binding protein 2851205..2852272 Salinibacter ruber DSM 13855 3851568 YP_446398.1 CDS pstC NC_007677.1 2852315 2853280 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 2852315..2853280 Salinibacter ruber DSM 13855 3850340 YP_446399.1 CDS pstA NC_007677.1 2853309 2854253 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 2853309..2854253 Salinibacter ruber DSM 13855 3850546 YP_446400.1 CDS pstB NC_007677.1 2854434 2855183 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 2854434..2855183 Salinibacter ruber DSM 13855 3852570 YP_446401.1 CDS phoU NC_007677.1 2855229 2855966 D identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 2855229..2855966 Salinibacter ruber DSM 13855 3851831 YP_446402.1 CDS SRU_2298 NC_007677.1 2855983 2857653 R hypothetical protein complement(2855983..2857653) Salinibacter ruber DSM 13855 3850682 YP_446403.1 CDS SRU_2299 NC_007677.1 2857782 2864852 R identified by match to protein family HMM PF00041; match to protein family HMM PF00082; peptidase complement(2857782..2864852) Salinibacter ruber DSM 13855 3851303 YP_446404.1 CDS SRU_2301 NC_007677.1 2865826 2866743 R identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(2865826..2866743) Salinibacter ruber DSM 13855 3851871 YP_446405.1 CDS ribD NC_007677.1 2867408 2868529 D identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 2867408..2868529 Salinibacter ruber DSM 13855 3852735 YP_446406.1 CDS ribE NC_007677.1 2868590 2869243 D catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2868590..2869243 Salinibacter ruber DSM 13855 3852649 YP_446407.1 CDS SRU_2304 NC_007677.1 2869570 2870439 R hypothetical protein complement(2869570..2870439) Salinibacter ruber DSM 13855 3851781 YP_446408.1 CDS SRU_2305 NC_007677.1 2870503 2871075 R hypothetical protein complement(2870503..2871075) Salinibacter ruber DSM 13855 3852474 YP_446409.1 CDS SRU_2306 NC_007677.1 2871448 2872467 D identified by match to protein family HMM PF00107; zinc-binding dehydrogenase family oxidoreductase 2871448..2872467 Salinibacter ruber DSM 13855 3851302 YP_446410.1 CDS SRU_2307 NC_007677.1 2872540 2873763 R identified by match to protein family HMM PF07690; major facilitator superfamily protein complement(2872540..2873763) Salinibacter ruber DSM 13855 3853065 YP_446411.1 CDS SRU_2308 NC_007677.1 2874839 2876440 R identified by match to protein family HMM PF00128; alpha-amylase complement(2874839..2876440) Salinibacter ruber DSM 13855 3851752 YP_446412.1 CDS SRU_2309 NC_007677.1 2876421 2877047 R identified by match to protein family HMM PF00106; short chain dehydrogenase complement(2876421..2877047) Salinibacter ruber DSM 13855 3851190 YP_446413.1 CDS SRU_2312 NC_007677.1 2877738 2879075 D identified by match to protein family HMM PF00324; amino acid permease family protein 2877738..2879075 Salinibacter ruber DSM 13855 3851045 YP_446414.1 CDS SRU_2313 NC_007677.1 2879106 2881814 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; ferric enterobactin receptor complement(2879106..2881814) Salinibacter ruber DSM 13855 3851640 YP_446415.1 CDS SRU_2314 NC_007677.1 2882121 2883068 D identified by match to protein family HMM PF01135; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2882121..2883068 Salinibacter ruber DSM 13855 3851236 YP_446416.1 CDS SRU_2315 NC_007677.1 2883011 2886265 D identified by match to protein family HMM PF00580; match to protein family HMM PF00929; DNA helicase II 2883011..2886265 Salinibacter ruber DSM 13855 3850431 YP_446417.1 CDS SRU_2316 NC_007677.1 2886338 2887165 D identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 2886338..2887165 Salinibacter ruber DSM 13855 3852543 YP_446418.1 CDS ilvE NC_007677.1 2887237 2888178 R identified by match to protein family HMM PF01063; match to protein family HMM TIGR01122; branched-chain amino acid aminotransferase complement(2887237..2888178) Salinibacter ruber DSM 13855 3851095 YP_446419.1 CDS SRU_2318 NC_007677.1 2888253 2889080 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(2888253..2889080) Salinibacter ruber DSM 13855 3852752 YP_446420.1 CDS SRU_2319 NC_007677.1 2889084 2889593 R identified by match to protein family HMM PF00583; diamine acetyltransferase 2 complement(2889084..2889593) Salinibacter ruber DSM 13855 3851809 YP_446421.1 CDS SRU_2320 NC_007677.1 2889645 2891219 R identified by match to protein family HMM PF01078; magnesium chelatase subunit ChlI family protein complement(2889645..2891219) Salinibacter ruber DSM 13855 3852203 YP_446422.1 CDS SRU_2321 NC_007677.1 2891459 2892115 R hypothetical protein complement(2891459..2892115) Salinibacter ruber DSM 13855 3851182 YP_446423.1 CDS SRU_2322 NC_007677.1 2892573 2895026 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; DNA-binding response regulator/sensor histidine kinase complement(2892573..2895026) Salinibacter ruber DSM 13855 3851156 YP_446424.1 CDS SRU_2323 NC_007677.1 2895113 2895682 D hypothetical protein 2895113..2895682 Salinibacter ruber DSM 13855 3851180 YP_446425.1 CDS SRU_2324 NC_007677.1 2895747 2897135 R hypothetical protein complement(2895747..2897135) Salinibacter ruber DSM 13855 3852310 YP_446426.1 CDS SRU_2325 NC_007677.1 2897095 2899605 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 2897095..2899605 Salinibacter ruber DSM 13855 3851280 YP_446427.1 CDS SRU_2326 NC_007677.1 2899813 2900922 D identified by match to protein family HMM PF02518; match to protein family HMM PF06580; two-component signal transduction histidine kinase 2899813..2900922 Salinibacter ruber DSM 13855 3851386 YP_446428.1 CDS SRU_2327 NC_007677.1 2900944 2901780 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; LytTr DNA-binding domain-containing protein 2900944..2901780 Salinibacter ruber DSM 13855 3851633 YP_446429.1 CDS SRU_2328 NC_007677.1 2901956 2903008 R identified by match to protein family HMM PF00296; luciferase-like monooxygenase superfamily protein complement(2901956..2903008) Salinibacter ruber DSM 13855 3850654 YP_446430.1 CDS SRU_2329 NC_007677.1 2903056 2904003 R glutathione synthase complement(2903056..2904003) Salinibacter ruber DSM 13855 3851066 YP_446431.1 CDS SRU_2330 NC_007677.1 2904291 2905904 R identified by match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase complement(2904291..2905904) Salinibacter ruber DSM 13855 3851202 YP_446432.1 CDS hsp NC_007677.1 2906156 2906590 D identified by match to protein family HMM PF00011; heat shock protein, class I 2906156..2906590 Salinibacter ruber DSM 13855 3853036 YP_446433.1 CDS SRU_2332 NC_007677.1 2906791 2907462 R phosphatidylethanolamine N-methyltransferase complement(2906791..2907462) Salinibacter ruber DSM 13855 3851167 YP_446434.1 CDS SRU_2333 NC_007677.1 2907414 2908778 D identified by match to protein family HMM PF02515; L-carnitine dehydratase 2907414..2908778 Salinibacter ruber DSM 13855 3853033 YP_446435.1 CDS glyS NC_007677.1 2908804 2910342 R Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase complement(2908804..2910342) Salinibacter ruber DSM 13855 3851506 YP_446436.1 CDS SRU_2335 NC_007677.1 2910448 2910726 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 2910448..2910726 Salinibacter ruber DSM 13855 3851911 YP_446437.1 CDS SRU_2336 NC_007677.1 2910690 2911166 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 2910690..2911166 Salinibacter ruber DSM 13855 3853062 YP_446438.1 CDS SRU_2337 NC_007677.1 2911170 2911556 R identified by match to protein family HMM TIGR02436; hypothetical protein complement(2911170..2911556) Salinibacter ruber DSM 13855 3852979 YP_446439.1 CDS radC NC_007677.1 2911617 2912318 R identified by match to protein family HMM PF00633; match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC complement(2911617..2912318) Salinibacter ruber DSM 13855 3850882 YP_446440.1 CDS SRU_2339 NC_007677.1 2912341 2912457 R hypothetical protein complement(2912341..2912457) Salinibacter ruber DSM 13855 3850940 YP_446441.1 CDS SRU_2340 NC_007677.1 2912522 2913643 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2912522..2913643) Salinibacter ruber DSM 13855 3851877 YP_446442.1 CDS SRU_2341 NC_007677.1 2914325 2915101 D identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 2914325..2915101 Salinibacter ruber DSM 13855 3852762 YP_446443.1 CDS SRU_2342 NC_007677.1 2915221 2916852 D identified by match to protein family HMM PF02875; Mur ligase family protein 2915221..2916852 Salinibacter ruber DSM 13855 3852361 YP_446444.1 CDS SRU_2343 NC_007677.1 2916868 2917560 R hypothetical protein complement(2916868..2917560) Salinibacter ruber DSM 13855 3852521 YP_446445.1 CDS SRU_2344 NC_007677.1 2917837 2918373 R identified by match to protein family HMM PF00903; glyoxalase family protein complement(2917837..2918373) Salinibacter ruber DSM 13855 3852683 YP_446446.1 CDS SRU_2345 NC_007677.1 2918854 2919990 R identified by match to protein family HMM PF00850; acetoin utilization protein acuC complement(2918854..2919990) Salinibacter ruber DSM 13855 3852956 YP_446447.1 CDS SRU_2346 NC_007677.1 2920260 2921465 D identified by match to protein family HMM PF00079; serpin (serine proteinase inhibitor) 2920260..2921465 Salinibacter ruber DSM 13855 3851653 YP_446448.1 CDS SRU_2347 NC_007677.1 2921500 2921916 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; hypothetical protein complement(2921500..2921916) Salinibacter ruber DSM 13855 3852032 YP_446449.1 CDS accA NC_007677.1 2921955 2922962 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2921955..2922962) Salinibacter ruber DSM 13855 3852462 YP_446450.1 CDS SRU_2350 NC_007677.1 2923948 2924490 R identified by match to protein family HMM PF01613; oxidoreductase complement(2923948..2924490) Salinibacter ruber DSM 13855 3850790 YP_446451.1 CDS dnaJ NC_007677.1 2924631 2925797 R identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ complement(2924631..2925797) Salinibacter ruber DSM 13855 3851891 YP_446452.1 CDS grpE NC_007677.1 2925897 2926568 R identified by match to protein family HMM PF01025; co-chaperone GrpE complement(2925897..2926568) Salinibacter ruber DSM 13855 3851634 YP_446453.1 CDS hrcA NC_007677.1 2926678 2927880 R identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA complement(2926678..2927880) Salinibacter ruber DSM 13855 3852583 YP_446454.1 CDS sppA NC_007677.1 2927937 2930177 D identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 2927937..2930177 Salinibacter ruber DSM 13855 3852621 YP_446455.1 CDS gpmI NC_007677.1 2930224 2931795 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2930224..2931795) Salinibacter ruber DSM 13855 3853050 YP_446456.1 CDS nth NC_007677.1 2931905 2932879 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(2931905..2932879) Salinibacter ruber DSM 13855 3852818 YP_446457.1 CDS SRU_2357 NC_007677.1 2932860 2934092 D hypothetical protein 2932860..2934092 Salinibacter ruber DSM 13855 3853019 YP_446458.1 CDS SRU_2358 NC_007677.1 2934187 2934720 R hypothetical protein complement(2934187..2934720) Salinibacter ruber DSM 13855 3851549 YP_446459.1 CDS hsp NC_007677.1 2934899 2935432 R identified by match to protein family HMM PF00011; heat shock protein, class I complement(2934899..2935432) Salinibacter ruber DSM 13855 3852556 YP_446460.1 CDS fahA NC_007677.1 2935646 2936935 R identified by match to protein family HMM PF01557; match to protein family HMM TIGR01266; fumarylacetoacetase complement(2935646..2936935) Salinibacter ruber DSM 13855 3850734 YP_446461.1 CDS SRU_2361 NC_007677.1 2937029 2938090 R hypothetical protein complement(2937029..2938090) Salinibacter ruber DSM 13855 3850884 YP_446462.1 CDS SRU_2362 NC_007677.1 2938206 2939951 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 2938206..2939951 Salinibacter ruber DSM 13855 3851914 YP_446463.1 CDS SRU_2363 NC_007677.1 2940075 2941313 D identified by match to protein family HMM PF01053; Cys/Met metabolism PLP-dependent enzyme superfamily protein 2940075..2941313 Salinibacter ruber DSM 13855 3851601 YP_446464.1 CDS SRU_2364 NC_007677.1 2941331 2941837 R identified by match to protein family HMM PF04248; hypothetical protein complement(2941331..2941837) Salinibacter ruber DSM 13855 3850543 YP_446465.1 CDS SRU_2365 NC_007677.1 2941881 2943413 R identified by match to protein family HMM PF00501; long-chain-fatty-acid-CoA ligase complement(2941881..2943413) Salinibacter ruber DSM 13855 3852951 YP_446466.1 CDS SRU_2366 NC_007677.1 2943474 2943929 R hypothetical protein complement(2943474..2943929) Salinibacter ruber DSM 13855 3850485 YP_446467.1 CDS pgm NC_007677.1 2943954 2945600 R identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase complement(2943954..2945600) Salinibacter ruber DSM 13855 3852569 YP_446468.1 CDS SRU_2368 NC_007677.1 2945588 2946580 D identified by match to protein family HMM PF02628; cytochrome aa3 oxidase assembly protein, CtaA 2945588..2946580 Salinibacter ruber DSM 13855 3853092 YP_446469.1 CDS cyoE NC_007677.1 2946679 2947584 D identified by match to protein family HMM PF01040; match to protein family HMM TIGR01473; protoheme IX farnesyltransferase 2946679..2947584 Salinibacter ruber DSM 13855 3852872 YP_446470.1 CDS drrA NC_007677.1 2947652 2948617 D identified by match to protein family HMM PF00005; daunorubicin resistance ATP-binding protein 2947652..2948617 Salinibacter ruber DSM 13855 3850611 YP_446471.1 CDS SRU_2371 NC_007677.1 2948662 2949444 D identified by match to protein family HMM PF01061; ABC transporter 2948662..2949444 Salinibacter ruber DSM 13855 3851305 YP_446472.1 CDS rnhB NC_007677.1 2949482 2950084 R identified by match to protein family HMM PF01351; ribonuclease HII complement(2949482..2950084) Salinibacter ruber DSM 13855 3851844 YP_446473.1 CDS pckA NC_007677.1 2950300 2951892 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2950300..2951892 Salinibacter ruber DSM 13855 3852121 YP_446474.1 CDS SRU_2374 NC_007677.1 2951933 2953378 R identified by match to protein family HMM PF01266; phytoene dehydrogenase complement(2951933..2953378) Salinibacter ruber DSM 13855 3850499 YP_446475.1 CDS ade NC_007677.1 2953429 2955252 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase complement(2953429..2955252) Salinibacter ruber DSM 13855 3853133 YP_446476.1 CDS SRU_2376 NC_007677.1 2955218 2955748 R hypothetical protein complement(2955218..2955748) Salinibacter ruber DSM 13855 3850996 YP_446477.1 CDS thrC NC_007677.1 2956014 2957330 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2956014..2957330) Salinibacter ruber DSM 13855 3853199 YP_446478.1 CDS SRU_2378 NC_007677.1 2957570 2958061 R hypothetical protein complement(2957570..2958061) Salinibacter ruber DSM 13855 3851371 YP_446479.1 CDS SRU_2380 NC_007677.1 2958635 2960533 R identified by match to protein family HMM PF00501; AMP-binding protein complement(2958635..2960533) Salinibacter ruber DSM 13855 3850773 YP_446480.1 CDS pyrD NC_007677.1 2960620 2961720 R identified by match to protein family HMM PF01180; match to protein family HMM TIGR01036; dihydroorotate oxidase complement(2960620..2961720) Salinibacter ruber DSM 13855 3852700 YP_446481.1 CDS SRU_2382 NC_007677.1 2961747 2962649 D identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 2961747..2962649 Salinibacter ruber DSM 13855 3852161 YP_446482.1 CDS SRU_2383 NC_007677.1 2962663 2965860 R hypothetical protein complement(2962663..2965860) Salinibacter ruber DSM 13855 3852813 YP_446483.1 CDS mrdA NC_007677.1 2966166 2968106 D identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 2 2966166..2968106 Salinibacter ruber DSM 13855 3852593 YP_446484.1 CDS rodA NC_007677.1 2968103 2969365 D identified by match to protein family HMM PF01098; rod shape-determining protein RodA 2968103..2969365 Salinibacter ruber DSM 13855 3851397 YP_446485.1 CDS amt NC_007677.1 2969779 2971197 R identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter complement(2969779..2971197) Salinibacter ruber DSM 13855 3853084 YP_446486.1 CDS uvrA NC_007677.1 2971341 2974391 R identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A complement(2971341..2974391) Salinibacter ruber DSM 13855 3851212 YP_446487.1 CDS SRU_2388 NC_007677.1 2974767 2975054 R identified by match to protein family HMM PF03733; alkaline phosphatase like protein complement(2974767..2975054) Salinibacter ruber DSM 13855 3850519 YP_446488.1 CDS SRU_2389 NC_007677.1 2975081 2975530 R identified by match to protein family HMM PF01986; hypothetical protein complement(2975081..2975530) Salinibacter ruber DSM 13855 3850842 YP_446489.1 CDS SRU_2390 NC_007677.1 2975527 2976645 R hypothetical protein complement(2975527..2976645) Salinibacter ruber DSM 13855 3852607 YP_446490.1 CDS SRU_2391 NC_007677.1 2976692 2978659 R identified by match to protein family HMM PF02368; Ig-like domain-containing protein complement(2976692..2978659) Salinibacter ruber DSM 13855 3851993 YP_446491.1 CDS SRU_2392 NC_007677.1 2978808 2980532 R identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; mercuric reductase complement(2978808..2980532) Salinibacter ruber DSM 13855 3851558 YP_446492.1 CDS SRU_2393 NC_007677.1 2980688 2982430 D identified by match to protein family HMM PF00512; match to protein family HMM PF01336; match to protein family HMM TIGR00229; sensor histidine kinase, pleC 2980688..2982430 Salinibacter ruber DSM 13855 3850825 YP_446493.1 CDS SRU_2394 NC_007677.1 2982441 2982668 D identified by match to protein family HMM PF02518; sensor kinase protein rcsC 2982441..2982668 Salinibacter ruber DSM 13855 3850594 YP_446494.1 CDS SRU_2395 NC_007677.1 2985809 2987086 D identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; IS605 family transposase 2985809..2987086 Salinibacter ruber DSM 13855 3852945 YP_446495.1 CDS SRU_2396 NC_007677.1 2987750 2988490 D hypothetical protein 2987750..2988490 Salinibacter ruber DSM 13855 3852612 YP_446496.1 CDS SRU_2397 NC_007677.1 2988629 2989156 R hypothetical protein complement(2988629..2989156) Salinibacter ruber DSM 13855 3851747 YP_446497.1 CDS SRU_2398 NC_007677.1 2989270 2990361 R identified by match to protein family HMM PF00005; iron(III) ABC transporter ATP-binding protein complement(2989270..2990361) Salinibacter ruber DSM 13855 3852159 YP_446498.1 CDS SRU_2399 NC_007677.1 2990436 2991983 R identified by match to protein family HMM PF00528; ABC transporter permease complement(2990436..2991983) Salinibacter ruber DSM 13855 3851862 YP_446499.1 CDS SRU_2400 NC_007677.1 2992135 2993226 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(2992135..2993226) Salinibacter ruber DSM 13855 3850590 YP_446500.1 CDS SRU_2401 NC_007677.1 2993419 2995530 D identified by match to protein family HMM PF00326; match to protein family HMM PF07676; acylaminoacyl-peptidase 2993419..2995530 Salinibacter ruber DSM 13855 3850605 YP_446501.1 CDS SRU_2402 NC_007677.1 2995559 2996731 R identified by match to protein family HMM PF00534; glycosyl transferase family protein complement(2995559..2996731) Salinibacter ruber DSM 13855 3853165 YP_446502.1 CDS SRU_2403 NC_007677.1 2996888 2998069 R identified by match to protein family HMM PF00248; aldo/keto reductase complement(2996888..2998069) Salinibacter ruber DSM 13855 3852636 YP_446503.1 CDS SRU_2404 NC_007677.1 2998066 2998701 R identified by match to protein family HMM PF00023; hypothetical protein complement(2998066..2998701) Salinibacter ruber DSM 13855 3851342 YP_446504.1 CDS katG NC_007677.1 2998747 3000936 R identified by match to protein family HMM PF00141; match to protein family HMM TIGR00198; catalase/peroxidase HPI complement(2998747..3000936) Salinibacter ruber DSM 13855 3851567 YP_446505.1 CDS oxyR NC_007677.1 3001124 3002032 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; redox-sensitive transcriptional activator OxyR 3001124..3002032 Salinibacter ruber DSM 13855 3850765 YP_446506.1 CDS SRU_2407 NC_007677.1 3002042 3003004 R identified by match to protein family HMM PF00535; glycosyl transferase family protein complement(3002042..3003004) Salinibacter ruber DSM 13855 3851705 YP_446507.1 CDS gyrB NC_007677.1 3003154 3005112 R identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B complement(3003154..3005112) Salinibacter ruber DSM 13855 3852555 YP_446508.1 CDS SRU_2409 NC_007677.1 3005509 3007251 D identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 3005509..3007251 Salinibacter ruber DSM 13855 3851729 YP_446509.1 CDS SRU_2410 NC_007677.1 3007273 3007791 R hypothetical protein complement(3007273..3007791) Salinibacter ruber DSM 13855 3850541 YP_446510.1 CDS SRU_2411 NC_007677.1 3007925 3008632 R identified by match to protein family HMM PF00571; acetoin utilization protein complement(3007925..3008632) Salinibacter ruber DSM 13855 3852062 YP_446511.1 CDS SRU_2412 NC_007677.1 3008725 3010008 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; GTPase complement(3008725..3010008) Salinibacter ruber DSM 13855 3852501 YP_446512.1 CDS SRU_2413 NC_007677.1 3010335 3012533 R identified by match to protein family HMM PF07584; match to protein family HMM TIGR02226; hypothetical protein complement(3010335..3012533) Salinibacter ruber DSM 13855 3850508 YP_446513.1 CDS SRU_2414 NC_007677.1 3012621 3013541 R identified by match to protein family HMM PF02469; beta-Ig-H3/fasciclin domain-containing protein complement(3012621..3013541) Salinibacter ruber DSM 13855 3852335 YP_446514.1 CDS bfeA NC_007677.1 3013646 3016354 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; ferric enterobactin receptor complement(3013646..3016354) Salinibacter ruber DSM 13855 3852724 YP_446515.1 CDS SRU_2416 NC_007677.1 3017172 3017834 R identified by match to protein family HMM PF01596; O-methyltransferase family protein complement(3017172..3017834) Salinibacter ruber DSM 13855 3851090 YP_446516.1 CDS SRU_2417 NC_007677.1 3018012 3018857 R hypothetical protein complement(3018012..3018857) Salinibacter ruber DSM 13855 3851455 YP_446517.1 CDS SRU_2418 NC_007677.1 3018836 3020755 D identified by match to protein family HMM PF00072; response regulator 3018836..3020755 Salinibacter ruber DSM 13855 3852981 YP_446518.1 CDS SRU_2419 NC_007677.1 3020879 3021370 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 3020879..3021370 Salinibacter ruber DSM 13855 3852325 YP_446519.1 CDS SRU_2420 NC_007677.1 3021498 3022805 D identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499; dihydrofolate synthetase 3021498..3022805 Salinibacter ruber DSM 13855 3853100 YP_446520.1 CDS SRU_2421 NC_007677.1 3022802 3024073 D identified by match to protein family HMM PF02374; match to protein family HMM TIGR00345; arsenite-activated ATPase ArsA 3022802..3024073 Salinibacter ruber DSM 13855 3852091 YP_446521.1 CDS SRU_2422 NC_007677.1 3024259 3025803 D identified by match to protein family HMM PF00368; hydroxymethylglutaryl-coenzyme A reductase 3024259..3025803 Salinibacter ruber DSM 13855 3851642 YP_446522.1 CDS SRU_2423 NC_007677.1 3025906 3027438 D identified by match to protein family HMM PF00535; glucosyltransferase 3025906..3027438 Salinibacter ruber DSM 13855 3852370 YP_446523.1 CDS SRU_2424 NC_007677.1 3027699 3028436 D hypothetical protein 3027699..3028436 Salinibacter ruber DSM 13855 3851939 YP_446524.1 CDS anmK NC_007677.1 3028512 3029705 D catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3028512..3029705 Salinibacter ruber DSM 13855 3852213 YP_446525.1 CDS thiL NC_007677.1 3029854 3030936 D identified by match to protein family HMM PF02769; match to protein family HMM TIGR01379; thiamine-monophosphate kinase 3029854..3030936 Salinibacter ruber DSM 13855 3853162 YP_446526.1 CDS SRU_2427 NC_007677.1 3030941 3031312 R identified by match to protein family HMM PF01627; sensor/response hybrid complement(3030941..3031312) Salinibacter ruber DSM 13855 3852345 YP_446527.1 CDS SRU_2428 NC_007677.1 3031549 3034203 R hypothetical protein complement(3031549..3034203) Salinibacter ruber DSM 13855 3852460 YP_446528.1 CDS atpD NC_007677.1 3034413 3035915 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3034413..3035915 Salinibacter ruber DSM 13855 3851146 YP_446529.1 CDS atpC NC_007677.1 3035993 3036442 D identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 3035993..3036442 Salinibacter ruber DSM 13855 3851416 YP_446530.1 CDS SRU_2431 NC_007677.1 3036949 3039069 D identified by match to protein family HMM PF00160; match to protein family HMM PF02985; match to protein family HMM PF03130; peptidyl-prolyl cis-trans isomerase domain-containing protein 3036949..3039069 Salinibacter ruber DSM 13855 3851037 YP_446531.1 CDS SRU_2432 NC_007677.1 3039123 3039746 R SoxW complement(3039123..3039746) Salinibacter ruber DSM 13855 3850440 YP_446532.1 CDS SRU_2433 NC_007677.1 3039773 3040939 D identified by match to protein family HMM PF01168; metal-activated pyridoxal enzyme 3039773..3040939 Salinibacter ruber DSM 13855 3852008 YP_446533.1 CDS SRU_2434 NC_007677.1 3041125 3042195 D hypothetical protein 3041125..3042195 Salinibacter ruber DSM 13855 3850701 YP_446534.1 CDS SRU_2435 NC_007677.1 3042241 3042960 D identified by match to protein family HMM PF04519; hypothetical protein 3042241..3042960 Salinibacter ruber DSM 13855 3850696 YP_446535.1 CDS SRU_2436 NC_007677.1 3042992 3044776 D identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; tRNA nucleotidyltransferase/poly(A) polymerase family protein 3042992..3044776 Salinibacter ruber DSM 13855 3850985 YP_446536.1 CDS glpA NC_007677.1 3044904 3046187 R identified by match to protein family HMM PF01266; anaerobic glycerol-3-phosphate dehydrogenase subunit A complement(3044904..3046187) Salinibacter ruber DSM 13855 3851528 YP_446537.1 CDS SRU_2438 NC_007677.1 3046474 3047427 D hypothetical protein 3046474..3047427 Salinibacter ruber DSM 13855 3852838 YP_446538.1 CDS SRU_2439 NC_007677.1 3047408 3048097 D identified by match to protein family HMM PF00571; hypothetical protein 3047408..3048097 Salinibacter ruber DSM 13855 3850563 YP_446539.1 CDS SRU_2440 NC_007677.1 3048171 3049103 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; daunorubicin C-13 ketoreductase complement(3048171..3049103) Salinibacter ruber DSM 13855 3852385 YP_446540.1 CDS SRU_2441 NC_007677.1 3049557 3050924 R hypothetical protein complement(3049557..3050924) Salinibacter ruber DSM 13855 3851968 YP_446541.1 CDS SRU_2442 NC_007677.1 3050958 3052901 R hypothetical protein complement(3050958..3052901) Salinibacter ruber DSM 13855 3853187 YP_446542.1 CDS SRU_2443 NC_007677.1 3053097 3053702 R hypothetical protein complement(3053097..3053702) Salinibacter ruber DSM 13855 3850502 YP_446543.1 CDS SRU_2444 NC_007677.1 3053710 3055455 R identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; FAD binding domain-containing protein complement(3053710..3055455) Salinibacter ruber DSM 13855 3853130 YP_446544.1 CDS SRU_2445 NC_007677.1 3055667 3056467 R identified by match to protein family HMM PF00149; phosphoesterase complement(3055667..3056467) Salinibacter ruber DSM 13855 3850990 YP_446545.1 CDS SRU_2446 NC_007677.1 3057064 3058059 D hypothetical protein 3057064..3058059 Salinibacter ruber DSM 13855 3853202 YP_446546.1 CDS SRU_2447 NC_007677.1 3058085 3059035 D hypothetical protein 3058085..3059035 Salinibacter ruber DSM 13855 3852339 YP_446547.1 CDS SRU_2448 NC_007677.1 3059074 3060528 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase complement(3059074..3060528) Salinibacter ruber DSM 13855 3853109 YP_446548.1 CDS SRU_2449 NC_007677.1 3060665 3060892 R identified by match to protein family HMM PF00313; hypothetical protein complement(3060665..3060892) Salinibacter ruber DSM 13855 3852953 YP_446549.1 CDS SRU_2450 NC_007677.1 3061098 3062675 R identified by match to protein family HMM PF00245; match to protein family HMM TIGR01409; alkaline phosphatase complement(3061098..3062675) Salinibacter ruber DSM 13855 3851157 YP_446550.1 CDS SRU_2451 NC_007677.1 3062694 3063500 R identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein complement(3062694..3063500) Salinibacter ruber DSM 13855 3850928 YP_446551.1 CDS proV NC_007677.1 3063567 3064247 R identified by match to protein family HMM PF00005; choline transporter complement(3063567..3064247) Salinibacter ruber DSM 13855 3853025 YP_446552.1 CDS SRU_2453 NC_007677.1 3064297 3064803 R identified by match to protein family HMM PF07681; hypothetical protein complement(3064297..3064803) Salinibacter ruber DSM 13855 3851654 YP_446553.1 CDS crcB NC_007677.1 3064844 3065245 R identified by match to protein family HMM PF02537; match to protein family HMM TIGR00494; crcB protein complement(3064844..3065245) Salinibacter ruber DSM 13855 3852537 YP_446554.1 CDS SRU_2455 NC_007677.1 3065333 3065611 D identified by match to protein family HMM TIGR01199; ISSru3, transposase insA 3065333..3065611 Salinibacter ruber DSM 13855 3852671 YP_446555.1 CDS SRU_2456 NC_007677.1 3065575 3066051 D identified by match to protein family HMM PF03400; ISSru3, transposase insB 3065575..3066051 Salinibacter ruber DSM 13855 3852376 YP_446556.1 CDS SRU_2457 NC_007677.1 3066081 3066245 R hypothetical protein complement(3066081..3066245) Salinibacter ruber DSM 13855 3850428 YP_446557.1 CDS SRU_2458 NC_007677.1 3066242 3066655 R identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase complement(3066242..3066655) Salinibacter ruber DSM 13855 3850961 YP_446558.1 CDS SRU_2459 NC_007677.1 3066689 3066985 R hypothetical protein complement(3066689..3066985) Salinibacter ruber DSM 13855 3853091 YP_446559.1 CDS SRU_2460 NC_007677.1 3067025 3068095 R identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832; hypothetical protein complement(3067025..3068095) Salinibacter ruber DSM 13855 3853094 YP_446560.1 CDS arsM NC_007677.1 3068233 3069045 R in Rhodopseudomonas palustris this protein confers resistance to arsenite; catalyzes the formation of a number of methylated intermediates from arsenite and SAM producing trimethylarsine; arsenite S-adenosylmethyltransferase complement(3068233..3069045) Salinibacter ruber DSM 13855 3853076 YP_446561.1 CDS SRU_2462 NC_007677.1 3069051 3069389 R identified by match to protein family HMM PF01022; ArsR family regulatory protein complement(3069051..3069389) Salinibacter ruber DSM 13855 3851401 YP_446562.1 CDS SRU_2463 NC_007677.1 3069528 3070262 D hypothetical protein 3069528..3070262 Salinibacter ruber DSM 13855 3851085 YP_446563.1 CDS SRU_2464 NC_007677.1 3070487 3071059 D hypothetical protein 3070487..3071059 Salinibacter ruber DSM 13855 3853061 YP_446564.1 CDS SRU_2465 NC_007677.1 3071165 3071260 D hypothetical protein 3071165..3071260 Salinibacter ruber DSM 13855 3850982 YP_446565.1 CDS SRU_2466 NC_007677.1 3071324 3072217 D hypothetical protein 3071324..3072217 Salinibacter ruber DSM 13855 3851257 YP_446566.1 CDS SRU_2467 NC_007677.1 3072229 3073428 R BNR repeat-containing protein complement(3072229..3073428) Salinibacter ruber DSM 13855 3852638 YP_446567.1 CDS SRU_2468 NC_007677.1 3073488 3073748 R Ste20-like kinase Don3 complement(3073488..3073748) Salinibacter ruber DSM 13855 3850352 YP_446568.1 CDS SRU_2469 NC_007677.1 3073755 3074018 R hypothetical protein complement(3073755..3074018) Salinibacter ruber DSM 13855 3851950 YP_446569.1 CDS SRU_2470 NC_007677.1 3074174 3074668 D hypothetical protein 3074174..3074668 Salinibacter ruber DSM 13855 3852386 YP_446570.1 CDS SRU_2471 NC_007677.1 3074675 3074920 D hypothetical protein 3074675..3074920 Salinibacter ruber DSM 13855 3851484 YP_446571.1 CDS SRU_2473 NC_007677.1 3075217 3075972 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3075217..3075972 Salinibacter ruber DSM 13855 3851203 YP_446572.1 CDS SRU_2474 NC_007677.1 3075988 3077511 D identified by match to protein family HMM PF00528; match to protein family HMM PF04069; transmembrane protein 3075988..3077511 Salinibacter ruber DSM 13855 3852725 YP_446573.1 CDS SRU_2475 NC_007677.1 3077523 3077921 R identified by match to protein family HMM PF05495; CHY zinc finger family protein complement(3077523..3077921) Salinibacter ruber DSM 13855 3851843 YP_446574.1 CDS SRU_2476 NC_007677.1 3077938 3079413 R hypothetical protein complement(3077938..3079413) Salinibacter ruber DSM 13855 3853048 YP_446575.1 CDS SRU_2477 NC_007677.1 3079473 3080981 R hypothetical protein complement(3079473..3080981) Salinibacter ruber DSM 13855 3850495 YP_446576.1 CDS SRU_2478 NC_007677.1 3081096 3082589 R hypothetical protein complement(3081096..3082589) Salinibacter ruber DSM 13855 3850973 YP_446577.1 CDS SRU_2479 NC_007677.1 3082635 3083402 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3082635..3083402) Salinibacter ruber DSM 13855 3852182 YP_446578.1 CDS SRU_2480 NC_007677.1 3083554 3084915 R hypothetical protein complement(3083554..3084915) Salinibacter ruber DSM 13855 3851853 YP_446579.1 CDS SRU_2481 NC_007677.1 3085108 3086034 R identified by match to protein family HMM PF02517; AbrB family transcriptional regulator complement(3085108..3086034) Salinibacter ruber DSM 13855 3850509 YP_446580.1 CDS SRU_2482 NC_007677.1 3086112 3086762 R hypothetical protein complement(3086112..3086762) Salinibacter ruber DSM 13855 3851666 YP_446581.1 CDS SRU_2483 NC_007677.1 3086793 3087269 R identified by match to protein family HMM PF03400; ISSru3, transposase insB complement(3086793..3087269) Salinibacter ruber DSM 13855 3850769 YP_446582.1 CDS SRU_2484 NC_007677.1 3087233 3087511 R identified by match to protein family HMM TIGR01199; ISSru3, transposase insA complement(3087233..3087511) Salinibacter ruber DSM 13855 3853009 YP_446583.1 CDS SRU_2485 NC_007677.1 3087668 3089173 D identified by match to protein family HMM PF02074; carboxypeptidase 3087668..3089173 Salinibacter ruber DSM 13855 3852753 YP_446584.1 CDS SRU_2486 NC_007677.1 3089266 3090765 R hypothetical protein complement(3089266..3090765) Salinibacter ruber DSM 13855 3852699 YP_446585.1 CDS SRU_2487 NC_007677.1 3090968 3092293 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor histidine kinase complement(3090968..3092293) Salinibacter ruber DSM 13855 3850637 YP_446586.1 CDS drrA NC_007677.1 3092596 3093333 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA complement(3092596..3093333) Salinibacter ruber DSM 13855 3852410 YP_446587.1 CDS SRU_2489 NC_007677.1 3093531 3094889 D identified by similarity to GB:AAU28096.1; match to protein family HMM PF01474; match to protein family HMM TIGR01358; 3-deoxy-7-phosphoheptulonate synthase 3093531..3094889 Salinibacter ruber DSM 13855 3850361 YP_446588.1 CDS SRU_2490 NC_007677.1 3094917 3095987 R identified by match to protein family HMM PF01546; match to protein family HMM PF05343; endoglucanase complement(3094917..3095987) Salinibacter ruber DSM 13855 3851544 YP_446589.1 CDS drrA NC_007677.1 3096262 3096942 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator DrrA 3096262..3096942 Salinibacter ruber DSM 13855 3851880 YP_446590.1 CDS SRU_2492 NC_007677.1 3096971 3097711 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; PhoP3 response regulator complement(3096971..3097711) Salinibacter ruber DSM 13855 3851715 YP_446591.1 CDS SRU_2493 NC_007677.1 3097958 3099388 R identified by match to protein family HMM PF01139; hypothetical protein complement(3097958..3099388) Salinibacter ruber DSM 13855 3850870 YP_446592.1 CDS mnmA NC_007677.1 3099615 3100766 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(3099615..3100766) Salinibacter ruber DSM 13855 3852911 YP_446593.1 CDS SRU_2495 NC_007677.1 3100999 3101397 D identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 3100999..3101397 Salinibacter ruber DSM 13855 3850635 YP_446594.1 CDS SRU_2496 NC_007677.1 3101414 3102001 R hypothetical protein complement(3101414..3102001) Salinibacter ruber DSM 13855 3851265 YP_446595.1 CDS SRU_2497 NC_007677.1 3102053 3103339 R identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase-like protein complement(3102053..3103339) Salinibacter ruber DSM 13855 3850604 YP_446596.1 CDS SRU_2498 NC_007677.1 3103489 3104898 R hypothetical protein complement(3103489..3104898) Salinibacter ruber DSM 13855 3852106 YP_446597.1 CDS rpoE NC_007677.1 3104895 3105512 R identified by match to protein family HMM PF04542; ECF subfamily RNA polymerase sigma factor complement(3104895..3105512) Salinibacter ruber DSM 13855 3850965 YP_446598.1 CDS radA NC_007677.1 3105642 3107021 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(3105642..3107021) Salinibacter ruber DSM 13855 3853157 YP_446599.1 CDS SRU_2501 NC_007677.1 3107258 3108010 D identified by match to protein family HMM PF02405; hypothetical protein 3107258..3108010 Salinibacter ruber DSM 13855 3852011 YP_446600.1 CDS SRU_2502 NC_007677.1 3108077 3108847 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3108077..3108847 Salinibacter ruber DSM 13855 3851842 YP_446601.1 CDS SRU_2503 NC_007677.1 3109019 3109837 D identified by match to protein family HMM PF02470; mce related protein 3109019..3109837 Salinibacter ruber DSM 13855 3850629 YP_446602.1 CDS SRU_2504 NC_007677.1 3109886 3111094 D hypothetical protein 3109886..3111094 Salinibacter ruber DSM 13855 3852505 YP_446603.1 CDS SRU_2506 NC_007677.1 3111158 3112567 D hypothetical protein 3111158..3112567 Salinibacter ruber DSM 13855 3852659 YP_446604.1 CDS SRU_2505 NC_007677.1 3112564 3113094 R hypothetical protein complement(3112564..3113094) Salinibacter ruber DSM 13855 3852682 YP_446605.1 CDS SRU_2507 NC_007677.1 3113332 3114795 R hypothetical protein complement(3113332..3114795) Salinibacter ruber DSM 13855 3852767 YP_446606.1 CDS SRU_2508 NC_007677.1 3114926 3115453 D identified by match to protein family HMM PF00571; hypothetical protein 3114926..3115453 Salinibacter ruber DSM 13855 3851328 YP_446607.1 CDS SRU_2509 NC_007677.1 3115896 3118775 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two-component sensor histidine kinase 3115896..3118775 Salinibacter ruber DSM 13855 3851340 YP_446608.1 CDS SRU_2510 NC_007677.1 3119146 3120702 R identified by similarity to SP:P42259; match to protein family HMM PF00015; match to protein family HMM PF00672; sensory rhodopsin transducer (methyl-accepting chemotaxis protein) complement(3119146..3120702) Salinibacter ruber DSM 13855 3850724 YP_446609.1 CDS SRU_2511 NC_007677.1 3120759 3121478 R identified by similarity to SP:P33743; match to protein family HMM PF01036; sensory rhodopsin (SRI) complement(3120759..3121478) Salinibacter ruber DSM 13855 3852586 YP_446610.1 CDS SRU_2512 NC_007677.1 3121873 3124140 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; two component system histidine kinase complement(3121873..3124140) Salinibacter ruber DSM 13855 3853168 YP_446611.1 CDS SRU_2513 NC_007677.1 3124666 3126540 D identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor/response regulator hybrid protein 3124666..3126540 Salinibacter ruber DSM 13855 3852316 YP_446612.1 CDS SRU_2514 NC_007677.1 3126625 3127428 D HD domain-containing protein 3126625..3127428 Salinibacter ruber DSM 13855 3850377 YP_446613.1 CDS SRU_2515 NC_007677.1 3127525 3128748 R identified by match to protein family HMM PF01145; SPFH domain-containing protein complement(3127525..3128748) Salinibacter ruber DSM 13855 3851243 YP_446614.1 CDS SRU_2516 NC_007677.1 3128940 3130628 R hypothetical protein complement(3128940..3130628) Salinibacter ruber DSM 13855 3851760 YP_446615.1 CDS SRU_2517 NC_007677.1 3130946 3131224 D hypothetical protein 3130946..3131224 Salinibacter ruber DSM 13855 3853051 YP_446616.1 CDS SRU_2518 NC_007677.1 3131243 3131908 D identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase 3131243..3131908 Salinibacter ruber DSM 13855 3853069 YP_446617.1 CDS SRU_2519 NC_007677.1 3132058 3133389 R identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; NifR3 family protein complement(3132058..3133389) Salinibacter ruber DSM 13855 3851483 YP_446618.1 CDS SRU_2520 NC_007677.1 3133388 3133675 D hypothetical protein 3133388..3133675 Salinibacter ruber DSM 13855 3852579 YP_446619.1 CDS SRU_2521 NC_007677.1 3133770 3134468 D hypothetical protein 3133770..3134468 Salinibacter ruber DSM 13855 3851697 YP_446620.1 CDS SRU_2522 NC_007677.1 3134386 3135843 D identified by match to protein family HMM PF01663; hypothetical protein 3134386..3135843 Salinibacter ruber DSM 13855 3852223 YP_446621.1 CDS SRU_2523 NC_007677.1 3135870 3136526 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3135870..3136526) Salinibacter ruber DSM 13855 3851012 YP_446622.1 CDS SRU_2524 NC_007677.1 3136580 3137761 R hypothetical protein complement(3136580..3137761) Salinibacter ruber DSM 13855 3852843 YP_446623.1 CDS rfaY NC_007677.1 3138041 3138586 D identified by match to protein family HMM PF04542; RNA polymerase ECF-type sigma factor 3138041..3138586 Salinibacter ruber DSM 13855 3850814 YP_446624.1 CDS SRU_2526 NC_007677.1 3138583 3139188 D hypothetical protein 3138583..3139188 Salinibacter ruber DSM 13855 3851445 YP_446625.1 CDS SRU_2527 NC_007677.1 3139207 3140670 D hypothetical protein 3139207..3140670 Salinibacter ruber DSM 13855 3851155 YP_446626.1 CDS SRU_2528 NC_007677.1 3140809 3141597 R identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein complement(3140809..3141597) Salinibacter ruber DSM 13855 3850415 YP_446627.1 CDS SRU_2529 NC_007677.1 3141536 3143269 R identified by match to protein family HMM PF00732; GMC oxidoreductase family protein complement(3141536..3143269) Salinibacter ruber DSM 13855 3851414 YP_446628.1 CDS SRU_2530 NC_007677.1 3143296 3145491 D identified by match to protein family HMM PF01182; match to protein family HMM PF02585; match to protein family HMM TIGR00502; glucosamine-6-phosphate deaminase 3143296..3145491 Salinibacter ruber DSM 13855 3851696 YP_446629.1 CDS SRU_2531 NC_007677.1 3145380 3146570 D identified by match to protein family HMM PF01261; match to protein family HMM TIGR01409; AP endonuclease 3145380..3146570 Salinibacter ruber DSM 13855 3852958 YP_446630.1 CDS SRU_2532 NC_007677.1 3147023 3148132 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 3147023..3148132 Salinibacter ruber DSM 13855 3852066 YP_446631.1 CDS SRU_2533 NC_007677.1 3148345 3149013 D identified by match to protein family HMM PF06439; secreted glycosyl hydrolase 3148345..3149013 Salinibacter ruber DSM 13855 3852221 YP_446632.1 CDS SRU_2534 NC_007677.1 3148952 3150043 D identified by match to protein family HMM PF01408; match to protein family HMM TIGR01409; oxidoreductase 3148952..3150043 Salinibacter ruber DSM 13855 3852994 YP_446633.1 CDS SRU_2535 NC_007677.1 3149644 3150501 D hypothetical protein 3149644..3150501 Salinibacter ruber DSM 13855 3851527 YP_446634.1 CDS SRU_2536 NC_007677.1 3150548 3151552 D identified by match to protein family HMM PF01261; match to protein family HMM PF07582; AP endonuclease 3150548..3151552 Salinibacter ruber DSM 13855 3851667 YP_446635.1 CDS SRU_2537 NC_007677.1 3151587 3151898 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(3151587..3151898) Salinibacter ruber DSM 13855 3853023 YP_446636.1 CDS SRU_2538 NC_007677.1 3151943 3154411 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein complement(3151943..3154411) Salinibacter ruber DSM 13855 3850414 YP_446637.1 CDS SRU_2539 NC_007677.1 3154608 3155114 R hypothetical protein complement(3154608..3155114) Salinibacter ruber DSM 13855 3851945 YP_446638.1 CDS SRU_2540 NC_007677.1 3155346 3156380 R hypothetical protein complement(3155346..3156380) Salinibacter ruber DSM 13855 3852680 YP_446639.1 CDS proS NC_007677.1 3156711 3158294 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3156711..3158294) Salinibacter ruber DSM 13855 3851451 YP_446640.1 CDS SRU_2542 NC_007677.1 3158599 3159990 D hypothetical protein 3158599..3159990 Salinibacter ruber DSM 13855 3852515 YP_446641.1 CDS SRU_2543 NC_007677.1 3160072 3161685 D identified by match to protein family HMM PF03349; Outer membrane protein transport protein (OMPP1/FadL/TodX) 3160072..3161685 Salinibacter ruber DSM 13855 3852681 YP_446642.1 CDS SRU_2544 NC_007677.1 3161717 3162877 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(3161717..3162877) Salinibacter ruber DSM 13855 3852664 YP_446643.1 CDS gcp NC_007677.1 3162879 3164075 R identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase complement(3162879..3164075) Salinibacter ruber DSM 13855 3852509 YP_446644.1 CDS SRU_2546 NC_007677.1 3164074 3164583 D hypothetical protein 3164074..3164583 Salinibacter ruber DSM 13855 3852042 YP_446645.1 CDS SRU_2547 NC_007677.1 3164671 3165138 D hypothetical protein 3164671..3165138 Salinibacter ruber DSM 13855 3852582 YP_446646.1 CDS SRU_2548 NC_007677.1 3165199 3165666 D identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; hypothetical protein 3165199..3165666 Salinibacter ruber DSM 13855 3851067 YP_446647.1 CDS SRU_2549 NC_007677.1 3165696 3166067 D identified by match to protein family HMM PF04241; hypothetical protein 3165696..3166067 Salinibacter ruber DSM 13855 3850891 YP_446648.1 CDS SRU_2550 NC_007677.1 3166104 3166463 R hypothetical protein complement(3166104..3166463) Salinibacter ruber DSM 13855 3850911 YP_446649.1 CDS SRU_2552 NC_007677.1 3166684 3167046 D hypothetical protein 3166684..3167046 Salinibacter ruber DSM 13855 3851577 YP_446650.1 CDS lipB NC_007677.1 3167012 3167782 R identified by match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoate-protein ligase B complement(3167012..3167782) Salinibacter ruber DSM 13855 3851304 YP_446651.1 CDS SRU_2553 NC_007677.1 3167846 3175639 R hypothetical protein complement(3167846..3175639) Salinibacter ruber DSM 13855 3852694 YP_446652.1 CDS lys1 NC_007677.1 3175947 3177197 R identified by match to protein family HMM PF01408; match to protein family HMM PF03435; saccharopine dehydrogenase complement(3175947..3177197) Salinibacter ruber DSM 13855 3852260 YP_446653.1 CDS recR NC_007677.1 3177216 3177929 R identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR complement(3177216..3177929) Salinibacter ruber DSM 13855 3853068 YP_446654.1 CDS SRU_2556 NC_007677.1 3178025 3178561 R identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein complement(3178025..3178561) Salinibacter ruber DSM 13855 3851955 YP_446655.1 CDS SRU_2557 NC_007677.1 3178539 3180725 R identified by match to protein family HMM PF00004; match to protein family HMM PF06144; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau complement(3178539..3180725) Salinibacter ruber DSM 13855 3850470 YP_446656.1 CDS SRU_2558 NC_007677.1 3180895 3181371 R identified by match to protein family HMM PF06271; RDD family protein complement(3180895..3181371) Salinibacter ruber DSM 13855 3852424 YP_446657.1 CDS tdk NC_007677.1 3181714 3182397 R identified by match to protein family HMM PF00265; thymidine kinase complement(3181714..3182397) Salinibacter ruber DSM 13855 3851644 YP_446658.1 CDS SRU_2560 NC_007677.1 3182573 3183223 R identified by match to protein family HMM PF03458; hypothetical protein complement(3182573..3183223) Salinibacter ruber DSM 13855 3850526 YP_446659.1 CDS SRU_2561 NC_007677.1 3183248 3184444 R identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator superfamily permease complement(3183248..3184444) Salinibacter ruber DSM 13855 3850841 YP_446660.1 CDS SRU_2562 NC_007677.1 3184514 3185110 R identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; hypothetical protein complement(3184514..3185110) Salinibacter ruber DSM 13855 3851184 YP_446661.1 CDS SRU_2563 NC_007677.1 3185351 3186253 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 3185351..3186253 Salinibacter ruber DSM 13855 3850722 YP_446662.1 CDS SRU_2564 NC_007677.1 3186435 3187241 R hypothetical protein complement(3186435..3187241) Salinibacter ruber DSM 13855 3852088 YP_446663.1 CDS SRU_2565 NC_007677.1 3187368 3188117 R batD protein complement(3187368..3188117) Salinibacter ruber DSM 13855 3851665 YP_446664.1 CDS SRU_2566 NC_007677.1 3188152 3189951 R hypothetical protein complement(3188152..3189951) Salinibacter ruber DSM 13855 3851496 YP_446665.1 CDS SRU_2567 NC_007677.1 3190107 3190706 R hypothetical protein complement(3190107..3190706) Salinibacter ruber DSM 13855 3852336 YP_446666.1 CDS SRU_2568 NC_007677.1 3190703 3191344 R identified by match to protein family HMM PF07719; hypothetical protein complement(3190703..3191344) Salinibacter ruber DSM 13855 3851320 YP_446667.1 CDS SRU_2569 NC_007677.1 3191422 3192474 R identified by match to protein family HMM PF00092; batB protein complement(3191422..3192474) Salinibacter ruber DSM 13855 3850468 YP_446668.1 CDS SRU_2570 NC_007677.1 3192564 3193433 R identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein complement(3192564..3193433) Salinibacter ruber DSM 13855 3851145 YP_446669.1 CDS SRU_2571 NC_007677.1 3193614 3194372 R identified by match to protein family HMM PF02146; Sir2 family transcriptional regulator complement(3193614..3194372) Salinibacter ruber DSM 13855 3852403 YP_446670.1 CDS SRU_2572 NC_007677.1 3194464 3195480 R hypothetical protein complement(3194464..3195480) Salinibacter ruber DSM 13855 3853013 YP_446671.1 CDS SRU_2573 NC_007677.1 3195519 3196634 R identified by match to protein family HMM PF01882; hypothetical protein complement(3195519..3196634) Salinibacter ruber DSM 13855 3851393 YP_446672.1 CDS SRU_2574 NC_007677.1 3196564 3198726 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensor histidine kinase complement(3196564..3198726) Salinibacter ruber DSM 13855 3850663 YP_446673.1 CDS miaB NC_007677.1 3198996 3200714 D identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-i(6)A37 thiotransferase enzyme MiaB 3198996..3200714 Salinibacter ruber DSM 13855 3852703 YP_446674.1 CDS SRU_2576 NC_007677.1 3200844 3201902 D poly-gamma-glutamate biosynthesis enzyme 3200844..3201902 Salinibacter ruber DSM 13855 3850515 YP_446675.1 CDS SRU_2577 NC_007677.1 3201909 3202358 D hypothetical protein 3201909..3202358 Salinibacter ruber DSM 13855 3853139 YP_446676.1 CDS SRU_2578 NC_007677.1 3202544 3203494 D HD domain-containing protein 3202544..3203494 Salinibacter ruber DSM 13855 3852450 YP_446677.1 CDS SRU_2579 NC_007677.1 3203834 3204541 D identified by similarity to SP:P33743; match to protein family HMM PF01036; sensory rhodopsin (SRI) 3203834..3204541 Salinibacter ruber DSM 13855 3852268 YP_446678.1 CDS htr1 NC_007677.1 3204627 3206204 D identified by similarity to SP:P33741; match to protein family HMM PF00015; match to protein family HMM PF00672; sensory rhodopsin I transducer (HTR-I) 3204627..3206204 Salinibacter ruber DSM 13855 3852224 YP_446679.1 CDS SRU_2581 NC_007677.1 3206361 3207107 R identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase sigma-28 factor complement(3206361..3207107) Salinibacter ruber DSM 13855 3852924 YP_446680.1 CDS SRU_2582 NC_007677.1 3207513 3208283 R identified by match to protein family HMM PF01656; flagellar biosynthesis protein complement(3207513..3208283) Salinibacter ruber DSM 13855 3851172 YP_446681.1 CDS SRU_2583 NC_007677.1 3208317 3209666 R hypothetical protein complement(3208317..3209666) Salinibacter ruber DSM 13855 3852433 YP_446682.1 CDS flhA NC_007677.1 3209694 3211775 R identified by similarity to SP:P35620; match to protein family HMM PF00771; match to protein family HMM TIGR01398; flagellar biosynthesis protein FlhA complement(3209694..3211775) Salinibacter ruber DSM 13855 3850838 YP_446683.1 CDS SRU_2585 NC_007677.1 3211893 3212954 R identified by match to protein family HMM PF01312; flagellar biosynthetic protein flhB complement(3211893..3212954) Salinibacter ruber DSM 13855 3851720 YP_446684.1 CDS fliR NC_007677.1 3213063 3213839 R identified by match to protein family HMM PF01311; match to protein family HMM TIGR01400; flagellar biosynthetic protein FliR complement(3213063..3213839) Salinibacter ruber DSM 13855 3851692 YP_446685.1 CDS fliQ NC_007677.1 3213924 3214193 R identified by match to protein family HMM PF01313; match to protein family HMM TIGR01402; flagellar biosynthetic protein FliQ complement(3213924..3214193) Salinibacter ruber DSM 13855 3850490 YP_446686.1 CDS fliP NC_007677.1 3214248 3215087 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(3214248..3215087) Salinibacter ruber DSM 13855 3852722 YP_446687.1 CDS SRU_2589 NC_007677.1 3215099 3215761 R hypothetical protein complement(3215099..3215761) Salinibacter ruber DSM 13855 3853113 YP_446688.1 CDS SRU_2590 NC_007677.1 3215795 3216547 R identified by match to protein family HMM PF01052; match to protein family HMM TIGR02480; flagellar motor switch FliN complement(3215795..3216547) Salinibacter ruber DSM 13855 3852119 YP_446689.1 CDS fliM NC_007677.1 3216663 3217781 R identified by match to protein family HMM PF01052; match to protein family HMM PF02154; match to protein family HMM TIGR01397; flagellar motor switch protein FliM complement(3216663..3217781) Salinibacter ruber DSM 13855 3852232 YP_446690.1 CDS fliL NC_007677.1 3217841 3218455 R identified by match to protein family HMM PF03748; flagellar basal body-associated protein FliL complement(3217841..3218455) Salinibacter ruber DSM 13855 3852913 YP_446691.1 CDS SRU_2593 NC_007677.1 3218392 3219117 R identified by match to protein family HMM PF00691; chemotaxis protein complement(3218392..3219117) Salinibacter ruber DSM 13855 3851379 YP_446692.1 CDS motA NC_007677.1 3219193 3220014 R identified by match to protein family HMM PF01618; chemotaxis motA protein complement(3219193..3220014) Salinibacter ruber DSM 13855 3852434 YP_446693.1 CDS SRU_2595 NC_007677.1 3220141 3222174 R identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein complement(3220141..3222174) Salinibacter ruber DSM 13855 3851949 YP_446694.1 CDS SRU_2596 NC_007677.1 3222147 3222827 R hypothetical protein complement(3222147..3222827) Salinibacter ruber DSM 13855 3850417 YP_446695.1 CDS SRU_2597 NC_007677.1 3222953 3224752 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis transducer complement(3222953..3224752) Salinibacter ruber DSM 13855 3852840 YP_446696.1 CDS SRU_2598 NC_007677.1 3224955 3225629 R hypothetical protein complement(3224955..3225629) Salinibacter ruber DSM 13855 3852498 YP_446697.1 CDS SRU_2599 NC_007677.1 3225692 3228490 R identified by match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein complement(3225692..3228490) Salinibacter ruber DSM 13855 3850445 YP_446698.1 CDS SRU_2600 NC_007677.1 3228614 3229297 R identified by match to protein family HMM PF01464; soluble lytic murein transglycosylase precursor complement(3228614..3229297) Salinibacter ruber DSM 13855 3852005 YP_446699.1 CDS SRU_2601 NC_007677.1 3229382 3230596 R identified by match to protein family HMM PF00072; match to protein family HMM PF01339; chemotaxis response regulator protein-glutamate methylesterase complement(3229382..3230596) Salinibacter ruber DSM 13855 3853093 YP_446700.1 CDS cheA NC_007677.1 3230529 3232169 R identified by match to protein family HMM PF01584; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis histidine kinase complement(3230529..3232169) Salinibacter ruber DSM 13855 3852134 YP_446701.1 CDS SRU_2603 NC_007677.1 3232517 3233551 R hypothetical protein complement(3232517..3233551) Salinibacter ruber DSM 13855 3850756 YP_446702.1 CDS cheY NC_007677.1 3233560 3233961 R identified by match to protein family HMM PF00072; chemotaxis protein CheY complement(3233560..3233961) Salinibacter ruber DSM 13855 3852902 YP_446703.1 CDS cheR NC_007677.1 3234000 3234878 R identified by match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein methyltransferase complement(3234000..3234878) Salinibacter ruber DSM 13855 3850583 YP_446704.1 CDS cheW NC_007677.1 3234924 3235496 R identified by match to protein family HMM PF01584; purine-binding chemotaxis protein CheW complement(3234924..3235496) Salinibacter ruber DSM 13855 3851515 YP_446705.1 CDS SRU_2607 NC_007677.1 3235632 3236930 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar biosynthesis cell-distal portion of basal-body rod complement(3235632..3236930) Salinibacter ruber DSM 13855 3851725 YP_446706.1 CDS SRU_2608 NC_007677.1 3237088 3237489 R identified by match to protein family HMM TIGR02530; flagellar operon protein complement(3237088..3237489) Salinibacter ruber DSM 13855 3852656 YP_446707.1 CDS SRU_2609 NC_007677.1 3237538 3238320 R identified by match to protein family HMM PF03963; basal-body rod modification protein FlgD complement(3237538..3238320) Salinibacter ruber DSM 13855 3850518 YP_446708.1 CDS SRU_2610 NC_007677.1 3238342 3238647 R hypothetical protein complement(3238342..3238647) Salinibacter ruber DSM 13855 3852553 YP_446709.1 CDS SRU_2611 NC_007677.1 3238893 3240293 R hypothetical protein complement(3238893..3240293) Salinibacter ruber DSM 13855 3852322 YP_446710.1 CDS SRU_2612 NC_007677.1 3240334 3240933 R kinesin-like protein K39 complement(3240334..3240933) Salinibacter ruber DSM 13855 3852451 YP_446711.1 CDS fliJ NC_007677.1 3241032 3241586 R identified by match to protein family HMM TIGR02473; flagellar export protein FliJ complement(3241032..3241586) Salinibacter ruber DSM 13855 3850368 YP_446712.1 CDS fliI NC_007677.1 3241675 3243003 R identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR02545; flagellar protein export ATPase FliI complement(3241675..3243003) Salinibacter ruber DSM 13855 3852795 YP_446713.1 CDS SRU_2615 NC_007677.1 3243043 3244002 R hypothetical protein complement(3243043..3244002) Salinibacter ruber DSM 13855 3852637 YP_446714.1 CDS fliG NC_007677.1 3244047 3245096 R identified by match to protein family HMM PF01706; match to protein family HMM TIGR00207; flagellar motor switch protein FliG complement(3244047..3245096) Salinibacter ruber DSM 13855 3852599 YP_446715.1 CDS fliF NC_007677.1 3245238 3246836 R identified by similarity to SP:P25798; match to protein family HMM PF01514; match to protein family HMM TIGR00206; flagellar M-ring protein FliF complement(3245238..3246836) Salinibacter ruber DSM 13855 3852520 YP_446716.1 CDS fliE NC_007677.1 3246923 3247243 R identified by match to protein family HMM PF02049; match to protein family HMM TIGR00205; flagellar hook-basal body complex protein (FliE) complement(3246923..3247243) Salinibacter ruber DSM 13855 3852281 YP_446717.1 CDS SRU_2619 NC_007677.1 3247323 3247643 R hypothetical protein complement(3247323..3247643) Salinibacter ruber DSM 13855 3851454 YP_446718.1 CDS flgC NC_007677.1 3247694 3248194 R identified by match to protein family HMM PF06429; match to protein family HMM TIGR01395; flagellar basal-body rod protein FlgC complement(3247694..3248194) Salinibacter ruber DSM 13855 3851008 YP_446719.1 CDS SRU_2621 NC_007677.1 3248241 3248654 R identified by match to protein family HMM PF00460; flagella basal body rod protein complement(3248241..3248654) Salinibacter ruber DSM 13855 3851413 YP_446720.1 CDS SRU_2622 NC_007677.1 3248700 3249659 D identified by match to protein family HMM PF02518; sensor protein 3248700..3249659 Salinibacter ruber DSM 13855 3851169 YP_446721.1 CDS ntrC NC_007677.1 3249711 3251285 D identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; nitrogen regulation protein NtrC 3249711..3251285 Salinibacter ruber DSM 13855 3851995 YP_446722.1 CDS SRU_2624 NC_007677.1 3251299 3251658 R hypothetical protein complement(3251299..3251658) Salinibacter ruber DSM 13855 3853039 YP_446723.1 CDS SRU_2625 NC_007677.1 3251782 3252189 R hypothetical protein complement(3251782..3252189) Salinibacter ruber DSM 13855 3850643 YP_446724.1 CDS SRU_2626 NC_007677.1 3252237 3253721 R identified by match to protein family HMM PF07195; flagellar hook-associated protein 2 C-terminus complement(3252237..3253721) Salinibacter ruber DSM 13855 3852696 YP_446725.1 CDS SRU_2627 NC_007677.1 3253775 3254215 R identified by match to protein family HMM PF02561; flagellar protein FliS complement(3253775..3254215) Salinibacter ruber DSM 13855 3851204 YP_446726.1 CDS SRU_2628 NC_007677.1 3254500 3258831 R identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box sensor histidine kinase/response regulator complement(3254500..3258831) Salinibacter ruber DSM 13855 3852258 YP_446727.1 CDS SRU_2629 NC_007677.1 3259286 3259780 R hypothetical protein complement(3259286..3259780) Salinibacter ruber DSM 13855 3851107 YP_446728.1 CDS SRU_2630 NC_007677.1 3260144 3261388 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; flagellin complement(3260144..3261388) Salinibacter ruber DSM 13855 3852311 YP_446729.1 CDS SRU_2631 NC_007677.1 3261487 3262749 R identified by match to protein family HMM PF00669; match to protein family HMM PF00700; phase 1 flagellin complement(3261487..3262749) Salinibacter ruber DSM 13855 3852598 YP_446730.1 CDS SRU_2632 NC_007677.1 3262718 3263896 D identified by match to protein family HMM PF00685; arylsulfotransferase 3262718..3263896 Salinibacter ruber DSM 13855 3850805 YP_446731.1 CDS SRU_2633 NC_007677.1 3263999 3264862 D identified by match to protein family HMM PF00685; cytosolic phenol sulfotransferaseA1 3263999..3264862 Salinibacter ruber DSM 13855 3852630 YP_446732.1 CDS SRU_2634 NC_007677.1 3264909 3265019 D hypothetical protein 3264909..3265019 Salinibacter ruber DSM 13855 3853121 YP_446733.1 CDS SRU_2635 NC_007677.1 3265081 3266085 R HDIG domain-containing protein complement(3265081..3266085) Salinibacter ruber DSM 13855 3850799 YP_446734.1 CDS flgL NC_007677.1 3266158 3267117 R identified by match to protein family HMM PF00669; match to protein family HMM TIGR02550; flagellar hook-associated protein 3 complement(3266158..3267117) Salinibacter ruber DSM 13855 3850636 YP_446735.1 CDS flgK NC_007677.1 3267158 3268960 R identified by match to protein family HMM PF06429; match to protein family HMM TIGR02492; flagellar hook-associated protein FlgK complement(3267158..3268960) Salinibacter ruber DSM 13855 3851738 YP_446736.1 CDS SRU_2638 NC_007677.1 3268977 3269519 R hypothetical protein complement(3268977..3269519) Salinibacter ruber DSM 13855 3852004 YP_446737.1 CDS SRU_2639 NC_007677.1 3269503 3269844 R hypothetical protein complement(3269503..3269844) Salinibacter ruber DSM 13855 3852733 YP_446738.1 CDS flgI NC_007677.1 3270057 3271157 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(3270057..3271157) Salinibacter ruber DSM 13855 3850804 YP_446739.1 CDS flgH NC_007677.1 3271278 3271925 R identified by match to protein family HMM PF02107; flagellar L-ring protein FlgH complement(3271278..3271925) Salinibacter ruber DSM 13855 3853186 YP_446740.1 CDS SRU_2642 NC_007677.1 3271973 3272701 R hypothetical protein complement(3271973..3272701) Salinibacter ruber DSM 13855 3851007 YP_446741.1 CDS flgG NC_007677.1 3272729 3273517 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02488; flagellar basal-body rod protein FlgG complement(3272729..3273517) Salinibacter ruber DSM 13855 3851986 YP_446742.1 CDS flgG NC_007677.1 3273557 3274282 R identified by match to protein family HMM PF00460; match to protein family HMM PF06429; flagellar basal-body rod protein complement(3273557..3274282) Salinibacter ruber DSM 13855 3850924 YP_446743.1 CDS SRU_2645 NC_007677.1 3274248 3275339 D hypothetical protein 3274248..3275339 Salinibacter ruber DSM 13855 3853148 YP_446744.1 CDS SRU_2646 NC_007677.1 3275846 3278743 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein 3275846..3278743 Salinibacter ruber DSM 13855 3851296 YP_446745.1 CDS SRU_2647 NC_007677.1 3278806 3280293 D hypothetical protein 3278806..3280293 Salinibacter ruber DSM 13855 3852655 YP_446746.1 CDS SRU_2648 NC_007677.1 3280381 3283245 D identified by match to protein family HMM PF00246; deacylase/carboxypeptidase superfamily protein 3280381..3283245 Salinibacter ruber DSM 13855 3851231 YP_446747.1 CDS SRU_2649 NC_007677.1 3283249 3286062 D identified by match to protein family HMM PF00326; match to protein family HMM PF07676; prolyl oligopeptidase family protein 3283249..3286062 Salinibacter ruber DSM 13855 3850538 YP_446748.1 CDS atoC NC_007677.1 3286199 3287680 D identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; response regulatory protein 3286199..3287680 Salinibacter ruber DSM 13855 3850561 YP_446749.1 CDS SRU_2651 NC_007677.1 3287853 3288335 D hypothetical protein 3287853..3288335 Salinibacter ruber DSM 13855 3852279 YP_446750.1 CDS aspG NC_007677.1 3288340 3289275 R identified by match to protein family HMM PF01112; asparaginase complement(3288340..3289275) Salinibacter ruber DSM 13855 3850888 YP_446751.1 CDS SRU_2653 NC_007677.1 3289527 3290807 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; 3-beta hydroxysteroid dehydrogenase/isomerase family protein complement(3289527..3290807) Salinibacter ruber DSM 13855 3850467 YP_446752.1 CDS SRU_2654 NC_007677.1 3290879 3291322 D identified by match to protein family HMM TIGR02293; hypothetical protein 3290879..3291322 Salinibacter ruber DSM 13855 3850633 YP_446753.1 CDS SRU_2655 NC_007677.1 3291377 3291871 D hypothetical protein 3291377..3291871 Salinibacter ruber DSM 13855 3850876 YP_446754.1 CDS purL NC_007677.1 3292053 3294317 D identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR01736; phosphoribosylformylglycinamidine synthase II 3292053..3294317 Salinibacter ruber DSM 13855 3850811 YP_446755.1 CDS trx NC_007677.1 3294573 3294917 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 3294573..3294917 Salinibacter ruber DSM 13855 3851863 YP_446756.1 CDS trxB NC_007677.1 3295089 3296207 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 3295089..3296207 Salinibacter ruber DSM 13855 3853203 YP_446757.1 CDS SRU_2659 NC_007677.1 3296230 3296826 D identified by match to protein family HMM PF01476; match to protein family HMM PF04972; N-acetylmuramoyl-L-alanine amidase 3296230..3296826 Salinibacter ruber DSM 13855 3851278 YP_446758.1 CDS ggt NC_007677.1 3296955 3298988 D identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltransferase 3296955..3298988 Salinibacter ruber DSM 13855 3852667 YP_446759.1 CDS SRU_2661 NC_007677.1 3299070 3299420 R hypothetical protein complement(3299070..3299420) Salinibacter ruber DSM 13855 3851583 YP_446760.1 CDS SRU_2662 NC_007677.1 3299504 3299992 R hypothetical protein complement(3299504..3299992) Salinibacter ruber DSM 13855 3850673 YP_446761.1 CDS SRU_2663 NC_007677.1 3299989 3302199 R identified by match to protein family HMM PF07721; hypothetical protein complement(3299989..3302199) Salinibacter ruber DSM 13855 3851508 YP_446762.1 CDS SRU_2664 NC_007677.1 3302298 3303203 D identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase 3302298..3303203 Salinibacter ruber DSM 13855 3850903 YP_446763.1 CDS SRU_2665 NC_007677.1 3303262 3305046 D hypothetical protein 3303262..3305046 Salinibacter ruber DSM 13855 3851472 YP_446764.1 CDS SRU_2666 NC_007677.1 3305054 3306127 R identified by match to protein family HMM PF00534; glycoside hydrolase complement(3305054..3306127) Salinibacter ruber DSM 13855 3852058 YP_446765.2 CDS SRU_2667 NC_007677.1 3306244 3307017 D identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 3306244..3307017 Salinibacter ruber DSM 13855 3851064 YP_446766.1 CDS ruvC NC_007677.1 3307074 3307613 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3307074..3307613 Salinibacter ruber DSM 13855 3852796 YP_446767.1 CDS SRU_2669 NC_007677.1 3307672 3307947 R hypothetical protein complement(3307672..3307947) Salinibacter ruber DSM 13855 3851690 YP_446768.1 CDS SRU_2670 NC_007677.1 3308056 3308511 D hypothetical protein 3308056..3308511 Salinibacter ruber DSM 13855 3850946 YP_446769.1 CDS SRU_2671 NC_007677.1 3308685 3309635 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3308685..3309635 Salinibacter ruber DSM 13855 3851193 YP_446770.1 CDS SRU_2672 NC_007677.1 3309559 3310992 D hypothetical protein 3309559..3310992 Salinibacter ruber DSM 13855 3850347 YP_446771.1 CDS tig NC_007677.1 3311275 3312663 D identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 3311275..3312663 Salinibacter ruber DSM 13855 3853117 YP_446772.1 CDS clpP NC_007677.1 3312685 3313503 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3312685..3313503 Salinibacter ruber DSM 13855 3852701 YP_446773.1 CDS SRU_2676 NC_007677.1 3314064 3315092 D identified by match to protein family HMM PF00639; peptidyl-prolyl cis-trans isomerase domain-containing protein 3314064..3315092 Salinibacter ruber DSM 13855 3852145 YP_446774.1 CDS SRU_2677 NC_007677.1 3315167 3315736 R identified by match to protein family HMM PF00583; acetyltransferase complement(3315167..3315736) Salinibacter ruber DSM 13855 3851732 YP_446775.1 CDS SRU_2678 NC_007677.1 3315723 3316391 D identified by match to protein family HMM PF01966; HD domain-containing protein 3315723..3316391 Salinibacter ruber DSM 13855 3851910 YP_446776.1 CDS SRU_2679 NC_007677.1 3316540 3317115 D hypothetical protein 3316540..3317115 Salinibacter ruber DSM 13855 3852432 YP_446777.1 CDS SRU_2680 NC_007677.1 3317190 3318377 D hypothetical protein 3317190..3318377 Salinibacter ruber DSM 13855 3850936 YP_446778.1 CDS SRU_2681 NC_007677.1 3318427 3319191 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; NAD-dependent epimerase/dehydratase family protein 3318427..3319191 Salinibacter ruber DSM 13855 3851812 YP_446779.1 CDS SRU_2682 NC_007677.1 3319239 3320045 R identified by match to protein family HMM PF00561; 3-oxoadipate enol-lactone hydrolase complement(3319239..3320045) Salinibacter ruber DSM 13855 3850528 YP_446780.1 CDS SRU_2683 NC_007677.1 3320268 3320786 D identified by match to protein family HMM PF07879; regulator for granule-associated proteins 3320268..3320786 Salinibacter ruber DSM 13855 3851035 YP_446781.1 CDS SRU_2684 NC_007677.1 3320831 3321256 D protein PhaF 3320831..3321256 Salinibacter ruber DSM 13855 3852198 YP_446782.1 CDS SRU_2685 NC_007677.1 3321353 3322735 D identified by match to protein family HMM PF01734; patatin family phospholipase 3321353..3322735 Salinibacter ruber DSM 13855 3851040 YP_446783.1 CDS SRU_2686 NC_007677.1 3322743 3324572 R identified by match to protein family HMM PF03109; ubiquinone biosynthesis protein complement(3322743..3324572) Salinibacter ruber DSM 13855 3850720 YP_446784.1 CDS SRU_2692 NC_007677.1 3330613 3331506 D identified by match to protein family HMM PF03793; protein PASTA domain-containing protein 3330613..3331506 Salinibacter ruber DSM 13855 3851274 YP_446785.1 CDS SRU_2693 NC_007677.1 3331691 3332317 R identified by match to protein family HMM PF00156; pyrimidine operon regulatory protein complement(3331691..3332317) Salinibacter ruber DSM 13855 3852342 YP_446786.1 CDS SRU_2694 NC_007677.1 3332750 3333982 R identified by match to protein family HMM PF01344; match to protein family HMM PF07646; hypothetical protein complement(3332750..3333982) Salinibacter ruber DSM 13855 3852445 YP_446787.1 CDS hemH NC_007677.1 3334178 3335362 D identified by match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase 3334178..3335362 Salinibacter ruber DSM 13855 3850957 YP_446788.1 CDS SRU_2696 NC_007677.1 3335423 3336385 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(3335423..3336385) Salinibacter ruber DSM 13855 3850614 YP_446789.1 CDS SRU_2698 NC_007677.1 3336517 3337113 D hypothetical protein 3336517..3337113 Salinibacter ruber DSM 13855 3851016 YP_446790.1 CDS SRU_2697 NC_007677.1 3337083 3337766 R identified by match to protein family HMM PF00691; OmpA family protein complement(3337083..3337766) Salinibacter ruber DSM 13855 3851999 YP_446791.1 CDS SRU_2699 NC_007677.1 3337805 3338710 R identified by match to protein family HMM PF04018; hypothetical protein complement(3337805..3338710) Salinibacter ruber DSM 13855 3852857 YP_446792.1 CDS SRU_2700 NC_007677.1 3338786 3340450 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721; hypothetical protein complement(3338786..3340450) Salinibacter ruber DSM 13855 3852465 YP_446793.1 CDS tmk NC_007677.1 3340394 3341059 D identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 3340394..3341059 Salinibacter ruber DSM 13855 3852393 YP_446794.1 CDS SRU_2702 NC_007677.1 3341148 3341690 D identified by match to protein family HMM PF01475; ferric uptake regulation protein 3341148..3341690 Salinibacter ruber DSM 13855 3851063 YP_446795.1 CDS SRU_2703 NC_007677.1 3341891 3342427 R hypothetical protein complement(3341891..3342427) Salinibacter ruber DSM 13855 3851399 YP_446796.1 CDS SRU_2705 NC_007677.1 3342582 3343406 D identified by match to protein family HMM PF00924; small-conductance mechanosensitive channel 3342582..3343406 Salinibacter ruber DSM 13855 3852187 YP_446797.1 CDS SRU_2704 NC_007677.1 3343403 3343879 R identified by match to protein family HMM PF03400; ISSru3, transposase insB complement(3343403..3343879) Salinibacter ruber DSM 13855 3851733 YP_446798.1 CDS SRU_2706 NC_007677.1 3343843 3344121 R identified by match to protein family HMM TIGR01199; ISSru3, transposase insA complement(3343843..3344121) Salinibacter ruber DSM 13855 3853043 YP_446799.1 CDS SRU_2707 NC_007677.1 3344199 3344504 D transmembrane protein 3344199..3344504 Salinibacter ruber DSM 13855 3851042 YP_446800.1 CDS SRU_2708 NC_007677.1 3344530 3345495 R identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; UDP-glucuronate decarboxylase complement(3344530..3345495) Salinibacter ruber DSM 13855 3851572 YP_446801.1 CDS SRU_2709 NC_007677.1 3345544 3346932 R identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF03720; match to protein family HMM PF03721; nucleotide sugar dehydrogenase complement(3345544..3346932) Salinibacter ruber DSM 13855 3851230 YP_446802.1 CDS SRU_2710 NC_007677.1 3347607 3348257 R hypothetical protein complement(3347607..3348257) Salinibacter ruber DSM 13855 3851894 YP_446803.1 CDS SRU_2711 NC_007677.1 3348338 3350647 R thiol:disulfide interchange protein DsbD complement(3348338..3350647) Salinibacter ruber DSM 13855 3851366 YP_446804.1 CDS SRU_2712 NC_007677.1 3351650 3351961 D hypothetical protein 3351650..3351961 Salinibacter ruber DSM 13855 3851418 YP_446805.1 CDS SRU_2713 NC_007677.1 3352306 3355503 D identified by match to protein family HMM PF00028; cadherin domain-containing protein 3352306..3355503 Salinibacter ruber DSM 13855 3851820 YP_446806.1 CDS SRU_2714 NC_007677.1 3355701 3357107 R hypothetical protein complement(3355701..3357107) Salinibacter ruber DSM 13855 3851435 YP_446807.1 CDS SRU_2715 NC_007677.1 3357441 3358211 R identified by match to protein family HMM PF04952; succinylglutamate desuccinylase/aspartoacylase family protein complement(3357441..3358211) Salinibacter ruber DSM 13855 3852306 YP_446808.1 CDS SRU_2716 NC_007677.1 3358239 3358559 R antibiotic biosynthesis monooxygenase domain-containing protein complement(3358239..3358559) Salinibacter ruber DSM 13855 3851799 YP_446809.1 CDS SRU_2717 NC_007677.1 3358662 3360329 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; multidrug resistance protein NorM complement(3358662..3360329) Salinibacter ruber DSM 13855 3851033 YP_446810.1 CDS SRU_2718 NC_007677.1 3360447 3361415 D hypothetical protein 3360447..3361415 Salinibacter ruber DSM 13855 3851659 YP_446811.1 CDS SRU_2719 NC_007677.1 3361747 3362466 R hypothetical protein complement(3361747..3362466) Salinibacter ruber DSM 13855 3851142 YP_446812.1 CDS SRU_2720 NC_007677.1 3362397 3365276 R identified by match to protein family HMM PF00326; acylaminoacyl-peptidase complement(3362397..3365276) Salinibacter ruber DSM 13855 3851673 YP_446813.1 CDS SRU_2721 NC_007677.1 3365345 3366565 R identified by match to protein family HMM PF00144; beta-lactamase complement(3365345..3366565) Salinibacter ruber DSM 13855 3852160 YP_446814.1 CDS SRU_2722 NC_007677.1 3366708 3367175 R hypothetical protein complement(3366708..3367175) Salinibacter ruber DSM 13855 3851739 YP_446815.1 CDS SRU_2723 NC_007677.1 3367213 3367743 R hypothetical protein complement(3367213..3367743) Salinibacter ruber DSM 13855 3850653 YP_446816.1 CDS SRU_2724 NC_007677.1 3367768 3369252 R lipoprotein complement(3367768..3369252) Salinibacter ruber DSM 13855 3852868 YP_446817.1 CDS SRU_2725 NC_007677.1 3369377 3370516 D identified by match to protein family HMM PF02518; match to protein family HMM PF06580; two-component system sensor protein 3369377..3370516 Salinibacter ruber DSM 13855 3851115 YP_446818.1 CDS SRU_2726 NC_007677.1 3370494 3371246 D identified by match to protein family HMM PF00072; LytTr DNA-binding domain-containing protein 3370494..3371246 Salinibacter ruber DSM 13855 3852353 YP_446819.1 CDS SRU_2727 NC_007677.1 3371378 3373498 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor for transport of vitamin B 3371378..3373498 Salinibacter ruber DSM 13855 3851227 YP_446820.1 CDS SRU_2728 NC_007677.1 3374011 3375186 D identified by match to protein family HMM PF01497; similar to agr_c_4467p; hemin-binding periplasmic protein hmut 3374011..3375186 Salinibacter ruber DSM 13855 3851481 YP_446821.1 CDS SRU_2729 NC_007677.1 3375193 3376350 D identified by match to protein family HMM PF01032; hemin ABC transporter permease 3375193..3376350 Salinibacter ruber DSM 13855 3851784 YP_446822.1 CDS SRU_2730 NC_007677.1 3376542 3377678 D identified by match to protein family HMM PF00595; match to protein family HMM PF01546; match to protein family HMM PF04389; match to protein family HMM PF05450; aminopeptidase 3376542..3377678 Salinibacter ruber DSM 13855 3850998 YP_446823.1 CDS SRU_2731 NC_007677.1 3377782 3378603 D identified by match to protein family HMM PF00005; hemin ABC transporter ATP-binding protein 3377782..3378603 Salinibacter ruber DSM 13855 3851214 YP_446824.1 CDS SRU_2732 NC_007677.1 3378625 3379692 D identified by match to protein family HMM PF05171; hemin-degrading family protein 3378625..3379692 Salinibacter ruber DSM 13855 3850810 YP_446825.1 CDS SRU_2733 NC_007677.1 3379751 3380173 D hypothetical protein 3379751..3380173 Salinibacter ruber DSM 13855 3850844 YP_446826.1 CDS SRU_2734 NC_007677.1 3380410 3380898 D hypothetical protein 3380410..3380898 Salinibacter ruber DSM 13855 3850566 YP_446827.1 CDS SRU_2735 NC_007677.1 3380961 3383465 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor domain-containing protein complement(3380961..3383465) Salinibacter ruber DSM 13855 3851374 YP_446828.1 CDS SRU_2736 NC_007677.1 3383464 3385869 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3383464..3385869 Salinibacter ruber DSM 13855 3851981 YP_446829.1 CDS SRU_2737 NC_007677.1 3385915 3386880 D hypothetical protein 3385915..3386880 Salinibacter ruber DSM 13855 3851892 YP_446830.1 CDS SRU_2738 NC_007677.1 3386918 3387799 R hypothetical protein complement(3386918..3387799) Salinibacter ruber DSM 13855 3851603 YP_446831.1 CDS fabF NC_007677.1 3388051 3389475 D identified by match to protein family HMM PF00109; match to protein family HMM PF02801; 3-oxoacyl-(acyl-carrier-protein) synthase II 3388051..3389475 Salinibacter ruber DSM 13855 3851896 YP_446832.1 CDS SRU_2740 NC_007677.1 3389563 3389973 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 3389563..3389973 Salinibacter ruber DSM 13855 3851742 YP_446833.1 CDS SRU_2741 NC_007677.1 3390010 3390960 D identified by match to protein family HMM PF00903; glyoxalase family protein 3390010..3390960 Salinibacter ruber DSM 13855 3851658 YP_446834.1 CDS SRU_2742 NC_007677.1 3390996 3391652 D identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 3390996..3391652 Salinibacter ruber DSM 13855 3852781 YP_446835.1 CDS SRU_2743 NC_007677.1 3391669 3393111 D identified by match to protein family HMM PF00128; glycosyl hydrolase family protein 3391669..3393111 Salinibacter ruber DSM 13855 3850732 YP_446836.1 CDS SRU_2744 NC_007677.1 3393684 3395132 R hypothetical protein complement(3393684..3395132) Salinibacter ruber DSM 13855 3851152 YP_446837.1 CDS priA NC_007677.1 3395529 3398006 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' complement(3395529..3398006) Salinibacter ruber DSM 13855 3851048 YP_446838.1 CDS SRU_2746 NC_007677.1 3398112 3398954 R hypothetical protein complement(3398112..3398954) Salinibacter ruber DSM 13855 3851748 YP_446839.1 CDS hrpB NC_007677.1 3398905 3401442 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM TIGR01970; ATP-dependent helicase HrpB complement(3398905..3401442) Salinibacter ruber DSM 13855 3853074 YP_446840.1 CDS SRU_2748 NC_007677.1 3401680 3402330 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; haloacid dehalogenase-like hydrolase complement(3401680..3402330) Salinibacter ruber DSM 13855 3852934 YP_446841.1 CDS SRU_2749 NC_007677.1 3402384 3405203 D hypothetical protein 3402384..3405203 Salinibacter ruber DSM 13855 3851470 YP_446842.1 CDS SRU_2750 NC_007677.1 3405279 3405797 R periplasmic efflux protein complement(3405279..3405797) Salinibacter ruber DSM 13855 3851569 YP_446843.1 CDS SRU_2751 NC_007677.1 3406023 3407639 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(3406023..3407639) Salinibacter ruber DSM 13855 3852984 YP_446844.1 CDS SRU_2752 NC_007677.1 3407668 3407958 D hypothetical protein 3407668..3407958 Salinibacter ruber DSM 13855 3851321 YP_446845.1 CDS fabF NC_007677.1 3407980 3409239 R identified by match to protein family HMM PF00109; match to protein family HMM PF02801; 3-oxoacyl-(acyl-carrier-protein) synthase II complement(3407980..3409239) Salinibacter ruber DSM 13855 3850484 YP_446846.1 CDS acpP NC_007677.1 3409376 3409612 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(3409376..3409612) Salinibacter ruber DSM 13855 3850584 YP_446847.1 CDS metK NC_007677.1 3409999 3411159 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3409999..3411159 Salinibacter ruber DSM 13855 3852132 YP_446848.1 CDS SRU_2756 NC_007677.1 3411374 3412057 D hypothetical protein 3411374..3412057 Salinibacter ruber DSM 13855 3851514 YP_446849.1 CDS sigW NC_007677.1 3412337 3412909 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; RNA polymerase ECF-type sigma factor 3412337..3412909 Salinibacter ruber DSM 13855 3850820 YP_446850.1 CDS SRU_2758 NC_007677.1 3412890 3413588 D identified by match to protein family HMM PF02922; isoamylase N-terminal domain-containing protein 3412890..3413588 Salinibacter ruber DSM 13855 3853063 YP_446851.1 CDS SRU_2759 NC_007677.1 3413595 3414827 D hypothetical protein 3413595..3414827 Salinibacter ruber DSM 13855 3852131 YP_446852.1 CDS SRU_2760 NC_007677.1 3414787 3415860 D hypothetical protein 3414787..3415860 Salinibacter ruber DSM 13855 3850527 YP_446853.1 CDS asg NC_007677.1 3415880 3417091 R identified by match to protein family HMM PF01112; asparaginase complement(3415880..3417091) Salinibacter ruber DSM 13855 3851469 YP_446854.1 CDS SRU_2762 NC_007677.1 3417405 3417983 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; extracytoplasmic function alternative sigma factor 3417405..3417983 Salinibacter ruber DSM 13855 3852987 YP_446855.1 CDS SRU_2763 NC_007677.1 3418477 3418650 R hypothetical protein complement(3418477..3418650) Salinibacter ruber DSM 13855 3852215 YP_446856.1 CDS SRU_2764 NC_007677.1 3418701 3420533 R identified by match to protein family HMM PF00271; helicase domain-containing protein complement(3418701..3420533) Salinibacter ruber DSM 13855 3852065 YP_446857.1 CDS SRU_2765 NC_007677.1 3420657 3423476 R identified by match to protein family HMM PF00326; match to protein family HMM PF00930; X-Pro dipeptidyl-peptidase complement(3420657..3423476) Salinibacter ruber DSM 13855 3850512 YP_446858.1 CDS menB NC_007677.1 3423563 3424456 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(3423563..3424456) Salinibacter ruber DSM 13855 3852315 YP_446859.1 CDS SRU_2767 NC_007677.1 3424526 3425623 R hypothetical protein complement(3424526..3425623) Salinibacter ruber DSM 13855 3851649 YP_446860.1 CDS SRU_2768 NC_007677.1 3425678 3427084 D catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 3425678..3427084 Salinibacter ruber DSM 13855 3852919 YP_446861.1 CDS SRU_2769 NC_007677.1 3427193 3427753 D identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; match to protein family HMM TIGR01926; peroxidase-related protein 3427193..3427753 Salinibacter ruber DSM 13855 3851704 YP_446862.1 CDS SRU_2770 NC_007677.1 3427903 3428778 D hypothetical protein 3427903..3428778 Salinibacter ruber DSM 13855 3851493 YP_446863.1 CDS SRU_2771 NC_007677.1 3428832 3429590 D hypothetical protein 3428832..3429590 Salinibacter ruber DSM 13855 3852072 YP_446864.1 CDS SRU_2772 NC_007677.1 3430685 3431689 D identified by match to protein family HMM PF01548; match to protein family HMM PF02371; IS110 family transposase 3430685..3431689 Salinibacter ruber DSM 13855 3851650 YP_446865.1 CDS SRU_2773 NC_007677.1 3431807 3432439 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 3431807..3432439 Salinibacter ruber DSM 13855 3852601 YP_446866.1 CDS pcaC NC_007677.1 3432574 3433098 D identified by match to protein family HMM PF02627; hypothetical protein 3432574..3433098 Salinibacter ruber DSM 13855 3850350 YP_446867.1 CDS SRU_2775 NC_007677.1 3433112 3434035 D identified by match to protein family HMM PF01625; methionine sulfoxide reductase 3433112..3434035 Salinibacter ruber DSM 13855 3852859 YP_446868.1 CDS SRU_2776 NC_007677.1 3434058 3434834 D identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide methionine sulfoxide reductase 3434058..3434834 Salinibacter ruber DSM 13855 3850758 YP_446869.1 CDS SRU_2777 NC_007677.1 3434858 3436291 R identified by match to protein family HMM PF03553; Na+/H+ antiporter complement(3434858..3436291) Salinibacter ruber DSM 13855 3850494 YP_446870.1 CDS SRU_2778 NC_007677.1 3436379 3437065 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short chain dehydrogenase/reductase family oxidoreductase complement(3436379..3437065) Salinibacter ruber DSM 13855 3852128 YP_446871.1 CDS SRU_2779 NC_007677.1 3437463 3439091 D identified by match to protein family HMM PF00474; sodium:solute symporter family protein 3437463..3439091 Salinibacter ruber DSM 13855 3850549 YP_446872.1 CDS SRU_2780 NC_007677.1 3439239 3439988 D identified by similarity to SP:P33742; match to protein family HMM PF01036; halorhodopsin (HR) 3439239..3439988 Salinibacter ruber DSM 13855 3852251 YP_446873.1 CDS SRU_2781 NC_007677.1 3440115 3440864 D identified by similarity to PIR:G84171; match to protein family HMM PF00106; oxidoreductase 3440115..3440864 Salinibacter ruber DSM 13855 3852651 YP_446874.1 CDS SRU_2782 NC_007677.1 3440900 3441268 R identified by similarity to GB:CAD79090.1; hypothetical protein complement(3440900..3441268) Salinibacter ruber DSM 13855 3851593 YP_446875.1 CDS SRU_2783 NC_007677.1 3441563 3443056 D identified by match to protein family HMM PF05761; match to protein family HMM TIGR02244; HAD family hydrolase 5'-nucleotidase 3441563..3443056 Salinibacter ruber DSM 13855 3850709 YP_446876.1 CDS nuoH NC_007677.1 3443202 3444371 R identified by match to protein family HMM PF00146; NADH dehydrogenase i, h subunit complement(3443202..3444371) Salinibacter ruber DSM 13855 3851084 YP_446877.1 CDS SRU_2785 NC_007677.1 3444426 3445082 R hypothetical protein complement(3444426..3445082) Salinibacter ruber DSM 13855 3852380 YP_446878.1 CDS SRU_2786 NC_007677.1 3445313 3446002 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(3445313..3446002) Salinibacter ruber DSM 13855 3853077 YP_446879.1 CDS SRU_2787 NC_007677.1 3446368 3447768 D identified by match to protein family HMM PF00291; cysteine synthase B 3446368..3447768 Salinibacter ruber DSM 13855 3852060 YP_446880.1 CDS SRU_2788 NC_007677.1 3447954 3448643 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; two-component response regulator complement(3447954..3448643) Salinibacter ruber DSM 13855 3852352 YP_446881.1 CDS SRU_2789 NC_007677.1 3449275 3450036 R identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family DNA-binding response regulator complement(3449275..3450036) Salinibacter ruber DSM 13855 3851111 YP_446882.1 CDS SRU_2790 NC_007677.1 3450194 3450895 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; response regulator receiver:histidine kinase complement(3450194..3450895) Salinibacter ruber DSM 13855 3852511 YP_446883.1 CDS coaE NC_007677.1 3451404 3452003 R identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase complement(3451404..3452003) Salinibacter ruber DSM 13855 3852766 YP_446884.1 CDS SRU_2792 NC_007677.1 3452100 3452492 R identified by match to protein family HMM PF01230; HIT-like protein complement(3452100..3452492) Salinibacter ruber DSM 13855 3851419 YP_446885.1 CDS SRU_2793 NC_007677.1 3452703 3453116 D identified by match to protein family HMM PF01242; 6-pyruvoyl-tetrahydropterin synthase 3452703..3453116 Salinibacter ruber DSM 13855 3852688 YP_446886.1 CDS folE NC_007677.1 3453226 3453825 D identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063; GTP cyclohydrolase I 3453226..3453825 Salinibacter ruber DSM 13855 3853073 YP_446887.1 CDS SRU_2795 NC_007677.1 3453909 3454607 D identified by match to protein family HMM PF00106; oxidoreductase 3453909..3454607 Salinibacter ruber DSM 13855 3852976 YP_446888.1 CDS SRU_2796 NC_007677.1 3454615 3455130 R hypothetical protein complement(3454615..3455130) Salinibacter ruber DSM 13855 3851176 YP_446889.1 CDS SRU_2797 NC_007677.1 3455382 3455933 D identified by match to protein family HMM TIGR02447; thioesterase domain-containing protein 3455382..3455933 Salinibacter ruber DSM 13855 3852536 YP_446890.1 CDS SRU_2798 NC_007677.1 3455937 3456617 R identified by match to protein family HMM PF00583; acetyltransferase complement(3455937..3456617) Salinibacter ruber DSM 13855 3852673 YP_446891.1 CDS SRU_2799 NC_007677.1 3456667 3457785 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; acetylornithine deacetylase 3456667..3457785 Salinibacter ruber DSM 13855 3850733 YP_446892.1 CDS nfi NC_007677.1 3457796 3458464 R identified by similarity to SP:P32679; match to protein family HMM PF04493; endonuclease V complement(3457796..3458464) Salinibacter ruber DSM 13855 3851420 YP_446893.1 CDS thrS NC_007677.1 3458810 3460894 D identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonyl-tRNA synthetase 3458810..3460894 Salinibacter ruber DSM 13855 3851570 YP_446894.1 CDS infC NC_007677.1 3461133 3461594 D identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 3461133..3461594 Salinibacter ruber DSM 13855 3852755 YP_446895.1 CDS SRU_2804 NC_007677.1 3461613 3461960 D identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; hypothetical protein 3461613..3461960 Salinibacter ruber DSM 13855 3853032 YP_446896.1 CDS rplT NC_007677.1 3462117 3462464 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3462117..3462464 Salinibacter ruber DSM 13855 3851252 YP_446897.1 CDS pheS NC_007677.1 3462777 3463787 D identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 3462777..3463787 Salinibacter ruber DSM 13855 3851575 YP_446898.1 CDS pheT NC_007677.1 3463924 3466416 D identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 3463924..3466416 Salinibacter ruber DSM 13855 3853030 YP_446899.1 CDS SRU_2808 NC_007677.1 3466589 3467086 D dopamine receptor D4 3466589..3467086 Salinibacter ruber DSM 13855 3851149 YP_446900.1 CDS SRU_2809 NC_007677.1 3467181 3467480 D hypothetical protein 3467181..3467480 Salinibacter ruber DSM 13855 3851905 YP_446901.1 CDS SRU_2810 NC_007677.1 3467544 3469553 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 3467544..3469553 Salinibacter ruber DSM 13855 3852817 YP_446902.1 CDS SRU_2811 NC_007677.1 3469661 3470914 D hypothetical protein 3469661..3470914 Salinibacter ruber DSM 13855 3850708 YP_446903.1 CDS SRU_2812 NC_007677.1 3471034 3472197 R identified by match to protein family HMM PF00704; chitinase A1 complement(3471034..3472197) Salinibacter ruber DSM 13855 3851310 YP_446904.1 CDS SRU_2813 NC_007677.1 3472261 3473430 R identified by match to protein family HMM TIGR01409; Tat pathway signal sequence domain-containing protein complement(3472261..3473430) Salinibacter ruber DSM 13855 3852049 YP_446905.1 CDS SRU_2814 NC_007677.1 3473599 3475323 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase family protein complement(3473599..3475323) Salinibacter ruber DSM 13855 3850554 YP_446906.1 CDS SRU_2815 NC_007677.1 3475468 3475698 D identified by match to protein family HMM TIGR02609; addiction module antidote 3475468..3475698 Salinibacter ruber DSM 13855 3853190 YP_446907.1 CDS SRU_2816 NC_007677.1 3475717 3476094 D identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death on curing protein 3475717..3476094 Salinibacter ruber DSM 13855 3852957 YP_446908.1 CDS SRU_2817 NC_007677.1 3476075 3480202 D hypothetical protein 3476075..3480202 Salinibacter ruber DSM 13855 3852084 YP_446909.1 CDS ccmG NC_007677.1 3480353 3480946 R cytochrome c biogenesis protein, thiol:disulfide interchange protein complement(3480353..3480946) Salinibacter ruber DSM 13855 3852277 YP_446910.1 CDS SRU_2819 NC_007677.1 3481003 3481731 R thioredoxin complement(3481003..3481731) Salinibacter ruber DSM 13855 3852512 YP_446911.1 CDS SRU_2820 NC_007677.1 3482183 3483292 D identified by match to protein family HMM PF01170; match to protein family HMM PF02926; THUMP domain/methyltransferase domain-containing protein 3482183..3483292 Salinibacter ruber DSM 13855 3851962 YP_446912.1 CDS SRU_2821 NC_007677.1 3483419 3485254 D identified by match to protein family HMM PF05960; X-Pro dipeptidyl-peptidase 3483419..3485254 Salinibacter ruber DSM 13855 3851458 YP_446913.1 CDS SRU_2822 NC_007677.1 3485357 3485968 R hypothetical protein complement(3485357..3485968) Salinibacter ruber DSM 13855 3850649 YP_446914.1 CDS SRU_2823 NC_007677.1 3486421 3488265 D identified by match to protein family HMM PF00015; methyl-accepting chemotaxis protein 3486421..3488265 Salinibacter ruber DSM 13855 3852401 YP_446915.1 CDS SRU_2824 NC_007677.1 3488914 3490200 D identified by match to protein family HMM PF02321; cobalt-zinc-cadmium outer membrane resistance protein 3488914..3490200 Salinibacter ruber DSM 13855 3850601 YP_446916.1 CDS SRU_2825 NC_007677.1 3490298 3491407 D identified by match to protein family HMM TIGR01730; cation efflux system protein CzcB-like protein 3490298..3491407 Salinibacter ruber DSM 13855 3852848 YP_446917.1 CDS SRU_2826 NC_007677.1 3491404 3494730 D identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; cation efflux system protein czcA 3491404..3494730 Salinibacter ruber DSM 13855 3851664 YP_446918.1 CDS SRU_2827 NC_007677.1 3494759 3495097 D identified by match to protein family HMM PF00543; nitrogen regulatory protein P-II 3494759..3495097 Salinibacter ruber DSM 13855 3850531 YP_446919.1 CDS SRU_2828 NC_007677.1 3495154 3495648 D hypothetical protein 3495154..3495648 Salinibacter ruber DSM 13855 3850900 YP_446920.1 CDS SRU_2829 NC_007677.1 3495764 3496207 D identified by match to protein family HMM TIGR01409; high-potential iron-sulfur protein 3495764..3496207 Salinibacter ruber DSM 13855 3852517 YP_446921.1 CDS SRU_2830 NC_007677.1 3496425 3497168 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 3496425..3497168 Salinibacter ruber DSM 13855 3852035 YP_446922.1 CDS SRU_2831 NC_007677.1 3497168 3498673 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; two-component sensor histidine kinase 3497168..3498673 Salinibacter ruber DSM 13855 3851427 YP_446923.1 CDS SRU_2832 NC_007677.1 3499217 3501148 D identified by match to protein family HMM PF00015; match to protein family HMM PF01590; GAF domain-containing protein 3499217..3501148 Salinibacter ruber DSM 13855 3852626 YP_446924.1 CDS clpB NC_007677.1 3501267 3503957 R identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; ATP-dependent chaperone protein ClpB complement(3501267..3503957) Salinibacter ruber DSM 13855 3852757 YP_446925.1 CDS SRU_2835 NC_007677.1 3504347 3505006 D polyhydroxyalkanoate granule-associated protein PhaF 3504347..3505006 Salinibacter ruber DSM 13855 3852657 YP_446926.1 CDS SRU_2837 NC_007677.1 3505487 3506080 D hypothetical protein 3505487..3506080 Salinibacter ruber DSM 13855 3851629 YP_446927.1 CDS SRU_2836 NC_007677.1 3506077 3507882 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease complement(3506077..3507882) Salinibacter ruber DSM 13855 3851875 YP_446928.1 CDS SRU_2838 NC_007677.1 3508068 3508544 D hypothetical protein 3508068..3508544 Salinibacter ruber DSM 13855 3851434 YP_446929.1 CDS rbsR NC_007677.1 3508737 3509732 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; ribose operon repressor 3508737..3509732 Salinibacter ruber DSM 13855 3850962 YP_446930.1 CDS SRU_2840 NC_007677.1 3509872 3511413 D identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Na+/solute symporter 3509872..3511413 Salinibacter ruber DSM 13855 3852737 YP_446931.1 CDS SRU_2841 NC_007677.1 3511699 3514743 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3511699..3514743 Salinibacter ruber DSM 13855 3851833 YP_446932.1 CDS SRU_2842 NC_007677.1 3514826 3516361 D identified by match to protein family HMM PF07980; hypothetical protein 3514826..3516361 Salinibacter ruber DSM 13855 3850851 YP_446933.1 CDS SRU_2843 NC_007677.1 3516412 3517368 D hypothetical protein 3516412..3517368 Salinibacter ruber DSM 13855 3853169 YP_446934.1 CDS SRU_2844 NC_007677.1 3517423 3518538 D identified by match to protein family HMM PF00722; match to protein family HMM PF00801; beta-glucanase precursor 3517423..3518538 Salinibacter ruber DSM 13855 3853119 YP_446935.1 CDS xloA NC_007677.1 3518734 3521334 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; xylosidase 3518734..3521334 Salinibacter ruber DSM 13855 3850731 YP_446936.1 CDS SRU_2846 NC_007677.1 3521487 3523016 D identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; sugar transporter subfamily protein 3521487..3523016 Salinibacter ruber DSM 13855 3852139 YP_446937.1 CDS SRU_2847 NC_007677.1 3523069 3525600 R hypothetical protein complement(3523069..3525600) Salinibacter ruber DSM 13855 3851099 YP_446938.1 CDS SRU_2848 NC_007677.1 3525659 3526522 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(3525659..3526522) Salinibacter ruber DSM 13855 3852039 YP_446939.1 CDS SRU_2849 NC_007677.1 3526547 3527944 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; membrane fusion efflux protein complement(3526547..3527944) Salinibacter ruber DSM 13855 3853072 YP_446940.1 CDS SRU_2850 NC_007677.1 3527963 3529375 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(3527963..3529375) Salinibacter ruber DSM 13855 3851187 YP_446941.1 CDS SRU_2851 NC_007677.1 3529424 3530644 R identified by match to protein family HMM PF02687; ABC transporter permease complement(3529424..3530644) Salinibacter ruber DSM 13855 3852588 YP_446942.1 CDS ybjZ NC_007677.1 3530696 3531940 R identified by match to protein family HMM PF02687; ABC transporter ATP-binding protein complement(3530696..3531940) Salinibacter ruber DSM 13855 3852541 YP_446943.1 CDS SRU_2853 NC_007677.1 3532072 3533817 D hypothetical protein 3532072..3533817 Salinibacter ruber DSM 13855 3851512 YP_446944.1 CDS SRU_2854 NC_007677.1 3534178 3534543 R hypothetical protein complement(3534178..3534543) Salinibacter ruber DSM 13855 3850705 YP_446945.1 CDS SRU_2855 NC_007677.1 3534595 3535563 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; two-component system response regulator protein complement(3534595..3535563) Salinibacter ruber DSM 13855 3850423 YP_446946.1 CDS SRU_2856 NC_007677.1 3535488 3536759 R identified by match to protein family HMM PF02518; match to protein family HMM PF06580; transmembrane sensor histidine kinase transcription regulator protein complement(3535488..3536759) Salinibacter ruber DSM 13855 3852162 YP_446947.1 CDS SRU_2858 NC_007677.1 3537092 3538612 R identified by match to protein family HMM PF00801; PKD domain-containing protein complement(3537092..3538612) Salinibacter ruber DSM 13855 3852399 YP_446948.1 CDS SRU_2859 NC_007677.1 3539082 3542237 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3539082..3542237 Salinibacter ruber DSM 13855 3851900 YP_446949.1 CDS SRU_2860 NC_007677.1 3542292 3543809 D hypothetical protein 3542292..3543809 Salinibacter ruber DSM 13855 3851737 YP_446950.1 CDS SRU_2861 NC_007677.1 3543994 3544806 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 3543994..3544806 Salinibacter ruber DSM 13855 3851540 YP_446951.1 CDS SRU_2862 NC_007677.1 3544894 3545013 R hypothetical protein complement(3544894..3545013) Salinibacter ruber DSM 13855 3852654 YP_446952.1 CDS SRU_2863 NC_007677.1 3545373 3546410 D hypothetical protein 3545373..3546410 Salinibacter ruber DSM 13855 3850642 YP_446953.1 CDS SRU_2864 NC_007677.1 3546444 3547022 R hypothetical protein complement(3546444..3547022) Salinibacter ruber DSM 13855 3850831 YP_446954.1 CDS SRU_2865 NC_007677.1 3547254 3548141 D hypothetical protein 3547254..3548141 Salinibacter ruber DSM 13855 3852002 YP_446955.1 CDS SRU_2866 NC_007677.1 3548159 3548656 D hypothetical protein 3548159..3548656 Salinibacter ruber DSM 13855 3852094 YP_446956.1 CDS SRU_2867 NC_007677.1 3548671 3549036 D hypothetical protein 3548671..3549036 Salinibacter ruber DSM 13855 3852506 YP_446957.1 CDS SRU_2868 NC_007677.1 3549101 3550285 D identified by match to protein family HMM PF00903; ABC transporter substrate-binding protein 3549101..3550285 Salinibacter ruber DSM 13855 3852292 YP_446958.1 CDS SRU_2869 NC_007677.1 3550378 3550788 D hypothetical protein 3550378..3550788 Salinibacter ruber DSM 13855 3851478 YP_446959.1 CDS SRU_2870 NC_007677.1 3550875 3551351 R hypothetical protein complement(3550875..3551351) Salinibacter ruber DSM 13855 3851491 YP_446960.1 CDS repB NC_007678.1 1 1011 D identified by match to protein family HMM PF01051; initiator replication protein RepB 1..1011 Salinibacter ruber DSM 13855 3853231 YP_446961.1 CDS SRU_p0002 NC_007678.1 1500 2798 D identified by match to protein family HMM PF00817; umuC protein 1500..2798 Salinibacter ruber DSM 13855 3853227 YP_446962.1 CDS SRU_p0003 NC_007678.1 3022 6297 D identified by match to protein family HMM PF00041; match to protein family HMM PF03382; match to protein family HMM TIGR02167; transmembrane protein, putative 3022..6297 Salinibacter ruber DSM 13855 3853219 YP_446963.1 CDS SRU_p0004 NC_007678.1 6325 7497 D identified by similarity to GB:CAD32945.1; match to protein family HMM PF00041; cellulose 1,4-beta-cellobiosidase-like protein 6325..7497 Salinibacter ruber DSM 13855 3853232 YP_446964.1 CDS SRU_p0005 NC_007678.1 7538 7954 R identified by match to protein family HMM PF01609; ISSru1, transposase orfB complement(7538..7954) Salinibacter ruber DSM 13855 3853214 YP_446965.1 CDS SRU_p0007 NC_007678.1 8790 9026 R hypothetical protein complement(8790..9026) Salinibacter ruber DSM 13855 3853215 YP_446966.1 CDS xerD NC_007678.1 9341 9481 R identified by similarity to GB:CAE25950.1; tyrosine recombinase XerD complement(9341..9481) Salinibacter ruber DSM 13855 3853207 YP_446967.1 CDS SRU_p0009 NC_007678.1 9991 10449 D hypothetical protein 9991..10449 Salinibacter ruber DSM 13855 3853216 YP_446968.1 CDS SRU_p0010 NC_007678.1 10560 11018 D hypothetical protein 10560..11018 Salinibacter ruber DSM 13855 3853229 YP_446969.1 CDS SRU_p0011 NC_007678.1 11163 11738 R identified by match to protein family HMM PF00589; match to protein family HMM TIGR02224; match to protein family HMM TIGR02225; phage integrase family site specific recombinase complement(11163..11738) Salinibacter ruber DSM 13855 3853208 YP_446970.1 CDS SRU_p0012 NC_007678.1 12254 14605 D identified by match to protein family HMM PF07581; GLUG domain-containing protein 12254..14605 Salinibacter ruber DSM 13855 3853209 YP_446971.1 CDS SRU_p0013 NC_007678.1 14839 15792 R hypothetical protein complement(14839..15792) Salinibacter ruber DSM 13855 3853233 YP_446972.1 CDS SRU_p0014 NC_007678.1 15870 16826 R hypothetical protein complement(15870..16826) Salinibacter ruber DSM 13855 3853212 YP_446973.1 CDS SRU_p0015 NC_007678.1 16921 17715 R hypothetical protein complement(16921..17715) Salinibacter ruber DSM 13855 3853211 YP_446974.1 CDS SRU_p0016 NC_007678.1 17749 17982 R hypothetical protein complement(17749..17982) Salinibacter ruber DSM 13855 3853213 YP_446975.1 CDS SRU_p0017 NC_007678.1 18011 19828 D hypothetical protein 18011..19828 Salinibacter ruber DSM 13855 3853205 YP_446976.1 CDS SRU_p0018 NC_007678.1 19847 20131 D hypothetical protein 19847..20131 Salinibacter ruber DSM 13855 3853206 YP_446977.1 CDS SRU_p0019 NC_007678.1 20271 20942 R putative lipoprotein complement(20271..20942) Salinibacter ruber DSM 13855 3853230 YP_446978.1 CDS SRU_p0020 NC_007678.1 21091 21360 R hypothetical protein complement(21091..21360) Salinibacter ruber DSM 13855 3853226 YP_446979.1 CDS SRU_p0021 NC_007678.1 21488 22285 R hypothetical protein complement(21488..22285) Salinibacter ruber DSM 13855 3853221 YP_446980.1 CDS SRU_p0022 NC_007678.1 22302 22661 R hypothetical protein complement(22302..22661) Salinibacter ruber DSM 13855 3853223 YP_446981.1 CDS SRU_p0023 NC_007678.1 22683 22955 D hypothetical protein 22683..22955 Salinibacter ruber DSM 13855 3853222 YP_446982.1 CDS SRU_p0024 NC_007678.1 22981 23487 D hypothetical protein 22981..23487 Salinibacter ruber DSM 13855 3853210 YP_446983.1 CDS SRU_p0025 NC_007678.1 23582 24088 R identified by match to protein family HMM PF05685; hypothetical protein complement(23582..24088) Salinibacter ruber DSM 13855 3853228 YP_446984.1 CDS SRU_p0026 NC_007678.1 24283 24951 R identified by match to protein family HMM PF00565; match to protein family HMM PF05901; nuclease, putative complement(24283..24951) Salinibacter ruber DSM 13855 3853234 YP_446985.1 CDS SRU_p0027 NC_007678.1 24981 28187 R BseRI endonuclease, putative complement(24981..28187) Salinibacter ruber DSM 13855 3853218 YP_446986.1 CDS SRU_p0028 NC_007678.1 28239 28463 R hypothetical protein complement(28239..28463) Salinibacter ruber DSM 13855 3853235 YP_446987.1 CDS parA NC_007678.1 28456 29091 R identified by similarity to GB:AAG24419.1; plasmid partition protein complement(28456..29091) Salinibacter ruber DSM 13855 3853237 YP_446988.1 CDS SRU_p0030 NC_007678.1 29279 29599 R hypothetical protein complement(29279..29599) Salinibacter ruber DSM 13855 3853220 YP_446989.1 CDS SRU_p0031 NC_007678.1 29658 31028 R hypothetical protein complement(29658..31028) Salinibacter ruber DSM 13855 3853224 YP_446990.1 CDS SRU_p0032 NC_007678.1 31188 33632 R hypothetical protein complement(31188..33632) Salinibacter ruber DSM 13855 3853225 YP_446991.1 CDS SRU_p0033 NC_007678.1 33823 34917 D hypothetical protein 33823..34917 Salinibacter ruber DSM 13855 3853217 SRU_0024 tRNA SRU_0024 NC_007677.1 22670 22743 D tRNA-Pro 22670..22743 Salinibacter ruber DSM 13855 3852031 SRU_0025 tRNA SRU_0025 NC_007677.1 23159 23232 D tRNA-Cys 23159..23232 Salinibacter ruber DSM 13855 3852891 SRU_0032 tRNA SRU_0032 NC_007677.1 30547 30638 R tRNA-Ser complement(30547..30638) Salinibacter ruber DSM 13855 3851924 SRU_0051 tRNA SRU_0051 NC_007677.1 49204 49277 R tRNA-Val complement(49204..49277) Salinibacter ruber DSM 13855 3851933 SRU_0052 tRNA SRU_0052 NC_007677.1 49371 49445 R tRNA-Gly complement(49371..49445) Salinibacter ruber DSM 13855 3852016 SRU_0379 tRNA SRU_0379 NC_007677.1 520184 520260 R tRNA-Met complement(520184..520260) Salinibacter ruber DSM 13855 3852027 SRU_0500 tRNA SRU_0500 NC_007677.1 674818 674894 D tRNA-Val 674818..674894 Salinibacter ruber DSM 13855 3851934 SRU_0782 tRNA SRU_0782 NC_007677.1 993196 993273 D tRNA-Arg 993196..993273 Salinibacter ruber DSM 13855 3852885 SRU_0816 tRNA SRU_0816 NC_007677.1 1038615 1038688 R tRNA-Gln complement(1038615..1038688) Salinibacter ruber DSM 13855 3852892 SRU_0856 tRNA SRU_0856 NC_007677.1 1099418 1099494 R tRNA-Met complement(1099418..1099494) Salinibacter ruber DSM 13855 3852028 SRU_0917 tRNA SRU_0917 NC_007677.1 1174276 1174368 D tRNA-Ser 1174276..1174368 Salinibacter ruber DSM 13855 3851925 SRU_0949 tRNA SRU_0949 NC_007677.1 1216255 1216327 D tRNA-Arg 1216255..1216327 Salinibacter ruber DSM 13855 3852886 SRU_1069 tRNA SRU_1069 NC_007677.1 1342564 1342640 D tRNA-His 1342564..1342640 Salinibacter ruber DSM 13855 3852019 SRU_1070 tRNA SRU_1070 NC_007677.1 1342677 1342754 D tRNA-Glu 1342677..1342754 Salinibacter ruber DSM 13855 3852014 SRU_1082 tRNA SRU_1082 NC_007677.1 1352109 1352181 D tRNA-Ala 1352109..1352181 Salinibacter ruber DSM 13855 3852882 SRU_1180 tRNA SRU_1180 NC_007677.1 1490273 1490345 D tRNA-Ala 1490273..1490345 Salinibacter ruber DSM 13855 3852883 SRU_1238 tRNA SRU_1238 NC_007677.1 1555130 1555203 D tRNA-Arg 1555130..1555203 Salinibacter ruber DSM 13855 3852887 SRU_1485 tRNA SRU_1485 NC_007677.1 1852407 1852483 D tRNA-Lys 1852407..1852483 Salinibacter ruber DSM 13855 3852025 SRU_1522 tRNA SRU_1522 NC_007677.1 1894048 1894121 R tRNA-Pro complement(1894048..1894121) Salinibacter ruber DSM 13855 3851922 SRU_1543 tRNA SRU_1543 NC_007677.1 1922925 1923016 R tRNA-Ser complement(1922925..1923016) Salinibacter ruber DSM 13855 3851926 SRU_1610 tRNA SRU_1610 NC_007677.1 2003871 2003946 D tRNA-Phe 2003871..2003946 Salinibacter ruber DSM 13855 3852030 SRU_1649 tRNA SRU_1649 NC_007677.1 2049656 2049731 R tRNA-Thr complement(2049656..2049731) Salinibacter ruber DSM 13855 3851928 SRU_1717 tRNA SRU_1717 NC_007677.1 2126357 2126430 D tRNA-Arg 2126357..2126430 Salinibacter ruber DSM 13855 3852888 SRU_1765 tRNA SRU_1765 NC_007677.1 2181297 2181372 R tRNA-Trp complement(2181297..2181372) Salinibacter ruber DSM 13855 3851931 SRU_1813 tRNA SRU_1813 NC_007677.1 2247305 2247376 R tRNA-Met complement(2247305..2247376) Salinibacter ruber DSM 13855 3852029 SRU_1814 tRNA SRU_1814 NC_007677.1 2247492 2247566 R tRNA-Thr complement(2247492..2247566) Salinibacter ruber DSM 13855 3851929 SRU_1815 tRNA SRU_1815 NC_007677.1 2247586 2247657 R tRNA-Gly complement(2247586..2247657) Salinibacter ruber DSM 13855 3852017 SRU_1816 tRNA SRU_1816 NC_007677.1 2247719 2247804 R tRNA-Tyr complement(2247719..2247804) Salinibacter ruber DSM 13855 3851932 SRU_1836 tRNA SRU_1836 NC_007677.1 2271497 2271572 R tRNA-Gly complement(2271497..2271572) Salinibacter ruber DSM 13855 3852018 SRU_1883 tRNA SRU_1883 NC_007677.1 2325181 2325269 D tRNA-Leu 2325181..2325269 Salinibacter ruber DSM 13855 3852021 SRU_1897 tRNA SRU_1897 NC_007677.1 2342889 2342963 R tRNA-Asp complement(2342889..2342963) Salinibacter ruber DSM 13855 3852890 SRU_1989 tRNA SRU_1989 NC_007677.1 2460376 2460463 D tRNA-Leu 2460376..2460463 Salinibacter ruber DSM 13855 3852022 SRU_2033 tRNA SRU_2033 NC_007677.1 2517508 2517592 R tRNA-Leu complement(2517508..2517592) Salinibacter ruber DSM 13855 3852023 SRU_2035 tRNA SRU_2035 NC_007677.1 2520028 2520102 D tRNA-Asn 2520028..2520102 Salinibacter ruber DSM 13855 3852889 SRU_2300 tRNA SRU_2300 NC_007677.1 2865704 2865779 R tRNA-Gln complement(2865704..2865779) Salinibacter ruber DSM 13855 3852893 SRU_2310 tRNA SRU_2310 NC_007677.1 2877352 2877425 D tRNA-Lys 2877352..2877425 Salinibacter ruber DSM 13855 3852026 SRU_2311 tRNA SRU_2311 NC_007677.1 2877516 2877604 D tRNA-Leu 2877516..2877604 Salinibacter ruber DSM 13855 3852024 SRU_2379 tRNA SRU_2379 NC_007677.1 2958346 2958422 R tRNA-Pro complement(2958346..2958422) Salinibacter ruber DSM 13855 3851923 SRU_2472 tRNA SRU_2472 NC_007677.1 3075011 3075083 R tRNA-Thr complement(3075011..3075083) Salinibacter ruber DSM 13855 3851930 SRU_2675 tRNA SRU_2675 NC_007677.1 3313684 3313756 R tRNA-Glu complement(3313684..3313756) Salinibacter ruber DSM 13855 3852015 SRU_2689 tRNA SRU_2689 NC_007677.1 3328157 3328232 R tRNA-Ala complement(3328157..3328232) Salinibacter ruber DSM 13855 3852884 SRU_2690 tRNA SRU_2690 NC_007677.1 3328246 3328320 R tRNA-Ile complement(3328246..3328320) Salinibacter ruber DSM 13855 3852020 SRU_2801 tRNA SRU_2801 NC_007677.1 3458760 3458833 D tRNA-Val 3458760..3458833 Salinibacter ruber DSM 13855 3851935 SRU_2857 tRNA SRU_2857 NC_007677.1 3536874 3536960 R tRNA-Ser complement(3536874..3536960) Salinibacter ruber DSM 13855 3851927 SRU_2687 rRNA rrfA NC_007677.1 3324764 3324873 R 5S ribosomal RNA complement(3324764..3324873) Salinibacter ruber DSM 13855 3852880 SRU_2688 rRNA rrlA NC_007677.1 3325001 3327939 R 23S ribosomal RNA complement(3325001..3327939) Salinibacter ruber DSM 13855 3852879 SRU_2691 rRNA rrsA NC_007677.1 3328508 3330049 R 16S ribosomal RNA complement(3328508..3330049) Salinibacter ruber DSM 13855 3852878