-- dump date 20120504_161256 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 568708000001 SEQ_END SEQ_END NC_016854.1 4879400 4879400 DR NC_016854.1; contig end 4879400..4879400 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 YP_005231087.1 CDS STMMW_00001 NC_016854.1 169 255 D pfam_scan;Pfam:PF08254; E()=1.1E-7;score=30.7;query 8-28;description=Leader_Thr; thr operon leader peptide 169..255 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763176 YP_005231088.1 CDS STMMW_00011 NC_016854.1 337 2799 D pfam_scan;Pfam:PF01842; E()=4.4E-5;score=23.2;query 325-376;description=ACT; pfam_scan;Pfam:PF00696; E()=1.1E-44;score=152.5;query 2-284;description=AA_kinase; pfam_scan;Pfam:PF00742; E()=5.6E-46;score=156.2;query 614-811;description=Homoserine_dh; pfam_scan;Pfam:PF03447; E()=2.2E-24;score=85.6;query472- 605;description=NAD_binding_3; aspartokinase I/homoserine dehydrogenase I 337..2799 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763316 YP_005231089.1 CDS STMMW_00021 NC_016854.1 2801 3730 D pfam_scan;Pfam:PF08544; E()=3.1E-14;score=52.5;query211- 287;description=GHMP_kinases_C; pfam_scan;Pfam:PF00288; E()=9.5E-18;score=63.4;query84- 150;description=GHMP_kinases_N; homoserine kinase; HK 2801..3730 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763346 YP_005231090.1 CDS STMMW_00031 NC_016854.1 3734 5020 D pfam_scan;Pfam:PF00291; E()=8.2E-29;score=100.8;query 96-365;description=PALP; threonine synthase 3734..5020 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763347 YP_005231091.1 CDS STMMW_00041 NC_016854.1 5114 5887 R pfam_scan;Pfam:PF03883; E()=1.1E-114;score=381.2;query 1-245;description=DUF328; hypothetical protein complement(5114..5887) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763348 YP_005231092.1 CDS STMMW_00051 NC_016854.1 5966 7396 R pfam_scan;Pfam:PF01235; E()=2.7E-174;score=579.4;query 50-456;description=Na_Ala_symp; tmhmm; query 1-477; putative amino-acid transport protein complement(5966..7396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759457 YP_005231093.1 CDS STMMW_00061 NC_016854.1 7665 8618 D pfam_scan;Pfam:PF00923; E()=1.8E-97;score=325.3;query 14-313;description=Transaldolase; transaldolase B 7665..8618 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759524 YP_005231094.1 CDS STMMW_00071 NC_016854.1 8729 9319 D pfam_scan;Pfam:PF00994; E()=1.1E-23;score=83.4;query8- 146;description=MoCF_biosynth; molybdopterin biosynthesis Mog protein 8729..9319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759525 YP_005231095.1 CDS STMMW_00081 NC_016854.1 9376 9942 R pfam_scan;Pfam:PF01184; E()=2.2E-58;score=196.5;query 4-182;description=Grp1_Fun34_YaaH; tmhmm; query 1-189; hypothetical protein complement(9376..9942) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763175 YP_005231096.1 CDS STMMW_00091 NC_016854.1 10092 10805 R pfam_scan;Pfam:PF03981; E()=1.7E-8;score=33.9;query 59-220;description=Ubiq_cyt_C_chap; hypothetical protein complement(10092..10805) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758859 YP_005231097.1 CDS STMMW_00101 NC_016854.1 10841 11245 R pfam_scan;Pfam:PF10807; E()=1.4E-86;score=286.6;query 1-134;description=DUF2541; hypothetical protein complement(10841..11245) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758860 YP_005231098.1 CDS STMMW_00111 NC_016854.1 11593 13509 D pfam_scan;Pfam:PF00012; E()=5.7E-281;score=932.5;query 4-602;description=HSP70; Heat shock 70 kDa protein; chaperone protein DnaK; heat shock protein 70; DnaK protein (heat shock protein 70) 11593..13509 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758861 YP_005231099.1 CDS STMMW_00121 NC_016854.1 13595 14734 D pfam_scan;Pfam:PF01556; E()=1.5E-31;score=107.8;query 245-343;description=DnaJ_C; pfam_scan;Pfam:PF00226; E()=7.4E-29;score=98.6;query5-67;description=DnaJ; pfam_scan;Pfam:PF00684; E()=5.5E-19;score=66.9;query134- 207;description=DnaJ_CXXCXGXG; DNAJ protein 13595..14734 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758862 YP_005231100.1 CDS STMMW_00131 NC_016854.1 15014 15961 D pfam_scan;Pfam:PF00126; E()=1.6E-10;score=40.4;query13-70;description=HTH_1; putative regulatory protein 15014..15961 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758863 YP_005231101.1 CDS STMMW_00141 NC_016854.1 16088 16432 D tmhmm; query 1-115; hypothetical protein 16088..16432 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758864 YP_005231102.1 CDS STMMW_00151 NC_016854.1 16493 17026 R pfam_scan;Pfam:PF05838; E()=7.2E-28;score=95.7;query4-88;description=DUF847; pfam_scan;Pfam:PF09374; E()=5.4E-21;score=73.4;query92- 175;description=PG_binding_3; hypothetical protein complement(16493..17026) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758865 YP_005231103.1 CDS STMMW_00161 NC_016854.1 17043 17486 R tmhmm; query 1-148; hypothetical protein complement(17043..17486) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758866 YP_005231104.1 CDS STMMW_00171 NC_016854.1 17867 19966 D pfam_scan;Pfam:PF02839; E()=1.6E-6;score=27.3;query 646-693;description=CBM_5_12; pfam_scan;Pfam:PF00704; E()=2.0E-60;score=204.5;query 54-465;description=Glyco_hydro_18; putative chitinase 17867..19966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758867 YP_005231105.1 CDS STMMW_00181 NC_016854.1 20058 23054 D putative chitinase 20058..23054 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758868 YP_005231106.1 CDS STMMW_00191 NC_016854.1 23335 24039 D hypothetical protein 23335..24039 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758869 YP_005231107.1 CDS STMMW_00201 NC_016854.1 24469 25011 D pfam_scan;Pfam:PF00419; E()=1.8E-36;score=125.6;query 32-179;description=Fimbrial; fimbrial subunit 24469..25011 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758870 YP_005231108.1 CDS STMMW_00211 NC_016854.1 25112 25798 D pfam_scan;Pfam:PF00345; E()=7.9E-40;score=135.3;query 28-147;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=8.8E-15;score=54.2;query153- 222;description=Pili_assembly_C; tmhmm; query 1-229; fimbrial chaperone 25112..25798 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758871 YP_005231109.1 CDS STMMW_00221 NC_016854.1 25803 28424 D pfam_scan;Pfam:PF00577; E()=7.9E-286;score=949.4;query 38-858;description=Usher; fimbrial usher protein 25803..28424 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758872 YP_005231110.1 CDS STMMW_00231 NC_016854.1 28425 29432 D pfam_scan;Pfam:PF00419; E()=4.4E-5;score=23.7;query 190-334;description=Fimbrial; fimbrial subunit 28425..29432 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758873 YP_005231111.1 CDS STMMW_00241 NC_016854.1 29433 29978 D pfam_scan;Pfam:PF00419; E()=3.4E-30;score=105.2;query 30-181;description=Fimbrial; fimbrial subunit 29433..29978 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758874 YP_005231112.1 CDS STMMW_00251 NC_016854.1 29994 30512 D pfam_scan;Pfam:PF00419; E()=2.3E-35;score=122.0;query 23-172;description=Fimbrial; fimbrial subunit 29994..30512 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758875 YP_005231113.1 CDS STMMW_00261 NC_016854.1 30478 31209 D pfam_scan;Pfam:PF00345; E()=1.2E-34;score=118.6;query 32-154;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=9.4E-17;score=60.5;query159- 234;description=Pili_assembly_C; tmhmm; query 1-244; fimbrial chaperone 30478..31209 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758876 YP_005231114.1 CDS STMMW_00271 NC_016854.1 31274 32119 D pfam_scan;Pfam:PF01323; E()=3.0E-8;score=33.0;query 113-153;description=DSBA; hypothetical protein 31274..32119 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758877 YP_005231115.1 CDS STMMW_00281 NC_016854.1 32116 32445 D Signal peptide; signalp; query 1-34;cleavage_site_probability=0.412; 0.552; hypothetical protein 32116..32445 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758878 YP_005231116.1 CDS STMMW_00291 NC_016854.1 32545 32994 R pfam_scan;Pfam:PF00486; E()=1.4E-5;score=24.2;query 28-99;description=Trans_reg_C; tmhmm; query 1-150; hypothetical protein complement(32545..32994) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758879 YP_005231117.1 CDS STMMW_00301 NC_016854.1 33364 34368 D pfam_scan;Pfam:PF00126; E()=5.2E-14;score=51.5;query13-70;description=HTH_1; putative transcriptional regulator (LysR family) 33364..34368 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758880 YP_005231118.1 CDS STMMW_00311 NC_016854.1 34376 34816 R pfam_scan;Pfam:PF00486; E()=2.0E-6;score=26.9;query 26-99;description=Trans_reg_C; tmhmm; query 1-147; putative transcriptional regulator complement(34376..34816) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758881 YP_005231119.1 CDS STMMW_00331 NC_016854.1 35339 37057 D pfam_scan;Pfam:PF05935; E()=1.5E-127;score=425.8;query 54-551;description=Arylsulfotrans; sulfatase 35339..37057 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758882 YP_005231120.1 CDS STMMW_00341 NC_016854.1 37103 38674 R pfam_scan;Pfam:PF00149; E()=5.5E-14;score=51.1;query33- 262;description=Metallophos; pfam_scan;Pfam:PF02872; E()=2.1E-38;score=131.1;query 339-484;description=5_nucleotid_C; putative secreted 5'-nucleotidase complement(37103..38674) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758883 YP_005231121.1 CDS STMMW_00351 NC_016854.1 38773 39534 R pfam_scan;Pfam:PF03502; E()=5.1E-45;score=153.3;query 11-253;description=Channel_Tsx; hypothetical protein complement(38773..39534) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758884 YP_005231122.1 CDS STMMW_00361 NC_016854.1 40131 41624 D pfam_scan;Pfam:PF00884; E()=2.4E-70;score=236.4;query 31-453;description=Sulfatase; tmhmm; query 1-498; putative secreted sulfatase 40131..41624 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758885 YP_005231123.1 CDS STMMW_00371 NC_016854.1 41723 42913 D pfam_scan;Pfam:PF04055; E()=2.8E-14;score=53.0;query15- 184;description=Radical_SAM; sulfatase regulatory protein 41723..42913 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758886 YP_005231124.1 CDS STMMW_00381 NC_016854.1 42932 44185 D pfam_scan;Pfam:PF03811; E()=4.1E-5;score=23.0;query 69-132;description=Ins_element1; hypothetical protein 42932..44185 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758887 YP_005231125.1 CDS STMMW_00391 NC_016854.1 44312 46027 D pfam_scan;Pfam:PF05935; E()=1.1E-125;score=419.6;query 54-544;description=Arylsulfotrans; sulfatase 44312..46027 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758888 YP_005231126.1 CDS STMMW_00401 NC_016854.1 46190 47356 D pfam_scan;Pfam:PF06965; E()=2.1E-166;score=552.9;query 5-380;description=Na_H_antiport_1; tmhmm; query 1-389; Na(+)/H(+) antiporter 1 46190..47356 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758889 YP_005231127.1 CDS STMMW_00411 NC_016854.1 47418 48317 D pfam_scan;Pfam:PF00126; E()=5.9E-15;score=54.5;query9-67;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.1E-10;score=39.6;query98- 287;description=LysR_substrate; transcriptional activator protein NhaR 47418..48317 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758890 YP_005231128.1 CDS STMMW_00421 NC_016854.1 48372 50411 R pfam_scan;Pfam:PF01055; E()=2.2E-132;score=441.2;query 217-671;description=Glyco_hydro_31; putative glycosyl hydrolase complement(48372..50411) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758891 YP_005231129.1 CDS STMMW_00431 NC_016854.1 50451 51824 R pfam_scan;Pfam:PF07690; E()=6.0E-10;score=38.6;query34-354;description=MFS_1; tmhmm; query 1-458; putative transport protein complement(50451..51824) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758892 YP_005231130.1 CDS STMMW_00441 NC_016854.1 52280 52543 R pfam_scan;Pfam:PF01649; E()=1.4E-30;score=104.8;query 2-85;description=Ribosomal_S20p; 30S ribosomal protein S20 complement(52280..52543) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758893 YP_005231131.1 CDS STMMW_00451 NC_016854.1 52649 52864 D pfam_scan;Pfam:PF10837; E()=1.2E-47;score=159.1;query 1-71;description=DUF2575; hypothetical protein 52649..52864 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758894 YP_005231132.1 CDS STMMW_00461 NC_016854.1 52872 53810 D pfam_scan;Pfam:PF06574; E()=1.8E-57;score=192.9;query 12-167;description=FAD_syn; pfam_scan;Pfam:PF01687; E()=3.6E-43;score=145.5;query 183-306;description=Flavokinase; riboflavin biosynthesis protein RibF 52872..53810 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758895 YP_005231133.1 CDS STMMW_00471 NC_016854.1 53855 56689 D pfam_scan;Pfam:PF00133; E()=6.5E-239;score=793.7;query 28-643;description=tRNA-synt_1; pfam_scan;Pfam:PF06827; E()=3.1E-9;score=35.8;query 904-932;description=zf-FPG_IleRS; pfam_scan;Pfam:PF08264; E()=1.0E-26;score=93.1;query687- 842;description=Anticodon_1; isoleucyl-tRNA synthetase 53855..56689 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758896 YP_005231134.1 CDS STMMW_00481 NC_016854.1 56689 57189 D pfam_scan;Pfam:PF01252; E()=7.5E-48;score=161.8;query 15-158;description=Peptidase_A8; tmhmm; query 1-167; lipoprotein signal peptidase 56689..57189 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758897 YP_005231135.1 CDS STMMW_00491 NC_016854.1 57344 57793 D pfam_scan;Pfam:PF00254; E()=1.2E-13;score=50.8;query4-114;description=FKBP_C; FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase 57344..57793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758898 YP_005231136.1 CDS STMMW_00501 NC_016854.1 57796 58746 D pfam_scan;Pfam:PF02401; E()=4.3E-123;score=409.5;query 3-285;description=LYTB; LytB protein 57796..58746 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758899 YP_005231137.1 CDS STMMW_00511 NC_016854.1 58946 60148 D Signal peptide; signalp; query 1-23;cleavage_site_probability=0.364; 0.625; hypothetical protein 58946..60148 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758900 YP_005231138.1 CDS STMMW_00521 NC_016854.1 60164 61084 D pfam_scan;Pfam:PF01156; E()=4.8E-103;score=344.3;query 6-303;description=IU_nuc_hydro; putative nucleoside hydrolase (IUNH family) 60164..61084 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758901 YP_005231139.1 CDS STMMW_00531 NC_016854.1 61106 61792 R pfam_scan;Pfam:PF00072; E()=3.1E-19;score=68.7;query7- 117;description=Response_reg; transcriptional regulatory protein citb complement(61106..61792) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758902 YP_005231140.1 CDS STMMW_00541 NC_016854.1 61794 63413 R pfam_scan;Pfam:PF02518; E()=9.9E-21;score=73.2;query433-535;description=HATPase_c; tmhmm; query 1-540; sensor kinase cita complement(61794..63413) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758903 YP_005231141.1 CDS STMMW_00551 NC_016854.1 63548 64849 R pfam_scan;Pfam:PF03977; E()=1.8E-173;score=576.6;query 19-430;description=OAD_beta; tmhmm; query 1-434; oxaloacetate decarboxylase beta chain complement(63548..64849) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758904 YP_005231142.1 CDS STMMW_00561 NC_016854.1 64862 66637 R pfam_scan;Pfam:PF00682; E()=4.4E-51;score=173.7;query 11-250;description=HMGL-like; pfam_scan;Pfam:PF00364; E()=1.4E-19;score=69.3;query525- 590;description=Biotin_lipoyl; pfam_scan;Pfam:PF02436; E()=2.9E-64;score=216.3;query 290-492;description=PYC_OADA; oxaloacetate decarboxylase subunit alpha complement(64862..66637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758905 YP_005231143.1 CDS STMMW_00571 NC_016854.1 66654 66893 R pfam_scan;Pfam:PF04277; E()=2.3E-21;score=75.7;query7-77;description=OAD_gamma; tmhmm; query 1-80; oxaloacetate decarboxylase gamma chain 1 complement(66654..66893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758906 YP_005231144.1 CDS STMMW_00581 NC_016854.1 67052 68392 R pfam_scan;Pfam:PF03390; E()=6.9E-157;score=521.9;query 22-441;description=2HCT; tmhmm; query 1-447; citrate-sodium symporter complement(67052..68392) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758907 YP_005231145.1 CDS STMMW_00591 NC_016854.1 68637 69680 D pfam_scan;Pfam:PF08218; E()=7.7E-80;score=266.5;query 150-336;description=Citrate_ly_lig; [citrate (pro-3S)-lyase] ligase 68637..69680 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758908 YP_005231146.1 CDS STMMW_00601 NC_016854.1 69710 70003 D pfam_scan;Pfam:PF06857; E()=9.9E-33;score=111.7;query 2-88;description=MdcD; citrate lyase acyl carrier protein 69710..70003 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758909 YP_005231147.1 CDS STMMW_00611 NC_016854.1 70000 70869 D pfam_scan;Pfam:PF03328; E()=3.2E-77;score=258.5;query 5-223;description=HpcH_HpaI; citrate lyase subunit beta 70000..70869 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758910 YP_005231148.1 CDS STMMW_00621 NC_016854.1 70880 72400 D pfam_scan;Pfam:PF04223; E()=1.1E-249;score=828.1;query 40-504;description=CitF; citrate lyase subunit alpha 70880..72400 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758911 YP_005231149.1 CDS STMMW_00631 NC_016854.1 72400 72951 D pfam_scan;Pfam:PF03802; E()=3.2E-61;score=205.7;query 11-179;description=CitX; citx protein 72400..72951 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758912 YP_005231150.1 CDS STMMW_00641 NC_016854.1 72929 73837 D pfam_scan;Pfam:PF01874; E()=3.5E-90;score=301.5;query 24-292;description=CitG; citg protein 72929..73837 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758913 YP_005231151.1 CDS STMMW_00651 NC_016854.1 74017 74838 D pfam_scan;Pfam:PF01113; E()=9.7E-45;score=151.3;query 6-129;description=DapB_N; pfam_scan;Pfam:PF05173; E()=1.9E-51;score=172.7;query 132-268;description=DapB_C; dihydrodipicolinate reductase 74017..74838 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758914 YP_005231152.1 CDS STMMW_00681 NC_016854.1 75881 77029 D pfam_scan;Pfam:PF00988; E()=7.5E-57;score=190.6;query 4-133;description=CPSase_sm_chain; pfam_scan;Pfam:PF00117; E()=5.0E-55;score=185.5;query 196-372;description=GATase; carbamoyl-phosphate synthase small subunit 75881..77029 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758916 YP_005231153.1 CDS STMMW_00691 NC_016854.1 77048 80275 D pfam_scan;Pfam:PF02142; E()=2.6E-20;score=71.8;query957-1041;description=MGS; pfam_scan;Pfam:PF02787; E()=2.7E-42;score=142.9;query 425-547;description=CPSase_L_D3; pfam_scan;Pfam:PF02786; E()=1.8E-82;score=275.4;query 128-334;description=CPSase_L_D2; pfam_scan;Pfam:PF00289; E()=6.2E-15;score=55.1;query7- 123;description=CPSase_L_chain; carbamoyl-phosphate synthase large subunit 77048..80275 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758917 YP_005231154.1 CDS STMMW_00701 NC_016854.1 80549 80944 D pfam_scan;Pfam:PF07180; E()=1.5E-6;score=27.5;query 4-61;description=DUF1401; transcriptional activator CaiF 80549..80944 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758918 YP_005231155.1 CDS STMMW_00711 NC_016854.1 81021 81617 R pfam_scan;Pfam:PF00132; E()=0.025;score=14.3;query 95-111;description=Hexapep; carnitine operon protein CaiE complement(81021..81617) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758919 YP_005231156.1 CDS STMMW_00721 NC_016854.1 81726 82511 R pfam_scan;Pfam:PF00378; E()=4.4E-58;score=195.0;query 15-180;description=ECH; carnitine racemase complement(81726..82511) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758920 YP_005231157.1 CDS STMMW_00731 NC_016854.1 82565 84118 R pfam_scan;Pfam:PF00501; E()=5.2E-111;score=370.7;query 39-451;description=AMP-binding; crotonobetaine/carnitine-CoA ligase complement(82565..84118) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758921 YP_005231158.1 CDS STMMW_00741 NC_016854.1 84181 85398 R pfam_scan;Pfam:PF02515; E()=8.2E-49;score=165.3;query 70-250;description=CoA_transf_3; L-carnitine dehydratase complement(84181..85398) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758922 YP_005231159.1 CDS STMMW_00751 NC_016854.1 85510 86652 R pfam_scan;Pfam:PF00441; E()=4.6E-48;score=162.8;query 227-376;description=Acyl-CoA_dh_1; pfam_scan;Pfam:PF02771; E()=2.7E-16;score=59.4;query6-110;description=Acyl- CoA_dh_N; pfam_scan;Pfam:PF02770; E()=3.0E-15;score=55.2;query123-171;description=Acyl- CoA_dh_M; carnitine operon oxidoreductase CaiA complement(85510..86652) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758923 YP_005231160.1 CDS STMMW_00761 NC_016854.1 86687 88204 R pfam_scan;Pfam:PF02028; E()=1.5E-125;score=419.0;query 14-499;description=BCCT; tmhmm; query 1-506; carnitine transporter complement(86687..88204) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758924 YP_005231161.1 CDS STMMW_00771 NC_016854.1 88685 89455 D pfam_scan;Pfam:PF01012; E()=5.6E-30;score=104.0;query 29-187;description=ETF; FixA protein 88685..89455 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758925 YP_005231162.1 CDS STMMW_00781 NC_016854.1 89471 90412 D pfam_scan;Pfam:PF01012; E()=8.4E-19;score=67.7;query19-154;description=ETF; pfam_scan;Pfam:PF00766; E()=1.3E-28;score=98.4;query190-274;description=ETF_alpha; FixB protein 89471..90412 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758926 YP_005231163.1 CDS STMMW_00791 NC_016854.1 90462 91748 D pfam_scan;Pfam:PF01494; E()=1.8E-12;score=46.5;query7- 185;description=FAD_binding_3; FixC protein 90462..91748 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758927 YP_005231164.1 CDS STMMW_00801 NC_016854.1 91745 92032 D ferredoxin like protein FixX 91745..92032 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758928 YP_005231165.1 CDS STMMW_00811 NC_016854.1 92095 93519 D pfam_scan;Pfam:PF00083; E()=4.1E-52;score=176.8;query 54-461;description=Sugar_tr; tmhmm; query 1-475; putative metabolite transport protein 92095..93519 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758929 YP_005231166.1 CDS STMMW_00821 NC_016854.1 93575 93838 D pfam_scan;Pfam:PF06004; E()=5.3E-20;score=70.4;query35-84;description=DUF903; putative lipoprotein 93575..93838 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758930 YP_005231167.1 CDS STMMW_00841 NC_016854.1 94132 94548 D Signal peptide; signalp; query 1-19;cleavage_site_probability=0.672; 0.955; secreted protein 94132..94548 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758931 YP_005231168.1 CDS STMMW_00851 NC_016854.1 94772 95062 R pfam_scan;Pfam:PF07338; E()=1.7E-17;score=63.3;query23-92;description=DUF1471; secreted protein complement(94772..95062) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758932 YP_005231169.1 CDS STMMW_00871 NC_016854.1 95272 95466 D tmhmm; query 1-65; putative inner membrane protein 95272..95466 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758934 YP_005231170.1 CDS STMMW_00881 NC_016854.1 95960 97849 D pfam_scan;Pfam:PF00884; E()=1.6E-36;score=125.3;query 67-573;description=Sulfatase; putative sulfatase 95960..97849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758935 YP_005231171.1 CDS STMMW_00901 NC_016854.1 98256 98786 D pfam_scan;Pfam:PF02525; E()=5.8E-42;score=143.1;query 2-167;description=Flavodoxin_2; putative NAD(P)H oxidoreductase 98256..98786 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758937 YP_005231172.1 CDS STMMW_00911 NC_016854.1 98779 100641 D pfam_scan;Pfam:PF00999; E()=1.7E-62;score=211.3;query 11-374;description=Na_H_Exchanger; pfam_scan;Pfam:PF02254; E()=9.2E-28;score=96.4;query402-511;description=TrkA_N; tmhmm; query 1-621; glutathione-regulated potassium-efflux system protein KefC 98779..100641 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758938 YP_005231173.1 CDS STMMW_00921 NC_016854.1 100840 101319 D pfam_scan;Pfam:PF00186; E()=4.2E-61;score=204.8;query 1-158;description=DHFR_1; dihydrofolate reductase type I 100840..101319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758939 YP_005231174.1 CDS STMMW_00931 NC_016854.1 101425 102273 R pfam_scan;Pfam:PF00149; E()=9.0E-21;score=73.3;query4-131;description=Metallophos; bis(5'-nucleosyl)-tetraphosphatase complement(101425..102273) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758940 YP_005231175.1 CDS STMMW_00941 NC_016854.1 102284 102661 R pfam_scan;Pfam:PF04379; E()=9.3E-37;score=123.7;query 17-104;description=DUF525; CorD protein complement(102284..102661) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758941 YP_005231176.1 CDS STMMW_00951 NC_016854.1 102664 103485 R pfam_scan;Pfam:PF00398; E()=1.4E-77;score=259.9;query 10-265;description=RrnaAD; dimethyladenosine transferase complement(102664..103485) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758942 YP_005231177.1 CDS STMMW_00961 NC_016854.1 103482 104471 R pfam_scan;Pfam:PF04166; E()=1.7E-124;score=414.5;query 29-322;description=PdxA; pyridoxal phosphate biosynthetic protein PdxA complement(103482..104471) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758943 YP_005231178.1 CDS STMMW_00971 NC_016854.1 104471 105757 R pfam_scan;Pfam:PF00639; E()=3.8E-22;score=78.1;query178-272;description=Rotamase; pfam_scan;Pfam:PF09312; E()=2.9E-46;score=155.7;query 25-142;description=SurA_N; survival protein SurA complement(104471..105757) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758944 YP_005231179.1 CDS STMMW_00981 NC_016854.1 105811 108171 R pfam_scan;Pfam:PF04453; E()=8.1E-122;score=406.5;query 308-699;description=OstA_C; pfam_scan;Pfam:PF03968; E()=4.2E-29;score=101.0;query 7-194;description=OstA; organic solvent tolerance protein complement(105811..108171) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758945 YP_005231180.1 CDS STMMW_00991 NC_016854.1 108425 109237 D pfam_scan;Pfam:PF00226; E()=1.8E-12;score=46.4;query207-266;description=DnaJ; pfam_scan;Pfam:PF05099; E()=1.7E-7;score=30.7;query 52-170;description=TerB; tmhmm; query 1-271; DNAj-like protein 108425..109237 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758946 YP_005231181.1 CDS STMMW_01001 NC_016854.1 109332 109991 R pfam_scan;Pfam:PF00849; E()=5.8E-32;score=110.6;query 22-169;description=PseudoU_synth_2; ribosomal large subunit pseudouridine synthase A complement(109332..109991) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758947 YP_005231182.1 CDS STMMW_01011 NC_016854.1 110003 112909 R pfam_scan;Pfam:PF00176; E()=4.5E-40;score=137.2;query 157-439;description=SNF2_N; pfam_scan;Pfam:PF00271; E()=4.3E-14;score=51.3;query525- 601;description=Helicase_C; ATP-dependent helicase HepA complement(110003..112909) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758948 YP_005231183.1 CDS STMMW_01021 NC_016854.1 113083 115434 R pfam_scan;Pfam:PF00136; E()=2.3E-49;score=168.1;query 400-771;description=DNA_pol_B; pfam_scan;Pfam:PF03104; E()=1.1E-15;score=57.0;query80- 296;description=DNA_pol_B_exo; DNA polymerase II complement(113083..115434) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758949 YP_005231184.1 CDS STMMW_01031 NC_016854.1 115478 116098 R pfam_scan;Pfam:PF02698; E()=1.3E-41;score=141.4;query 40-186;description=DUF218; tmhmm; query 1-207; secreted protein complement(115478..116098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758950 YP_005231185.1 CDS STMMW_01051 NC_016854.1 116300 116602 D tmhmm; query 1-101; putative inner membrane protein 116300..116602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758952 YP_005231186.1 CDS STMMW_01061 NC_016854.1 116817 117236 D hypothetical protein 116817..117236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758953 YP_005231187.1 CDS STMMW_01071 NC_016854.1 117242 117937 R pfam_scan;Pfam:PF00596; E()=1.1E-52;score=177.8;query 8-196;description=Aldolase_II; L-ribulose-5-phosphate 4-epimerase complement(117242..117937) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758954 YP_005231188.1 CDS STMMW_01081 NC_016854.1 118078 119580 R pfam_scan;Pfam:PF02610; E()=8.1E-186;score=616.7;query 1-359;description=Arabinose_Isome; pfam_scan;Pfam:PF11762; E()=1.1E-48;score=163.4;query 362-476;description=Arabinose_Iso_C; L-arabinose isomerase complement(118078..119580) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758955 YP_005231189.1 CDS STMMW_01091 NC_016854.1 119591 121300 R pfam_scan;Pfam:PF02782; E()=7.4E-37;score=126.7;query 291-501;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=7.6E-6;score=24.9;query 4-133;description=FGGY_N; ribulokinase; L-ribulokinase complement(119591..121300) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758956 YP_005231190.1 CDS STMMW_01101 NC_016854.1 121641 122486 D pfam_scan;Pfam:PF02311; E()=6.0E-26;score=90.5;query24- 161;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=7.4E-8;score=31.8;query 186-227;description=HTH_AraC; arabinose operon regulatory protein 121641..122486 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758957 YP_005231191.1 CDS STMMW_01111 NC_016854.1 122605 123372 D pfam_scan;Pfam:PF09335; E()=1.8E-21;score=76.1;query36- 159;description=SNARE_assoc; tmhmm; query 1-256; DedA family integral membrane protein 122605..123372 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758958 YP_005231192.1 CDS STMMW_01121 NC_016854.1 123411 124118 R pfam_scan;Pfam:PF00005; E()=2.2E-47;score=161.4;query 25-191;description=ABC_tran; ABC transporter complement(123411..124118) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758959 YP_005231193.1 CDS STMMW_01131 NC_016854.1 124102 125712 R pfam_scan;Pfam:PF00528; E()=1.3E-7;score=30.9;query 75-268;description=BPD_transp_1; tmhmm; query 1-537; putative ABC transporter integral membrane protein complement(124102..125712) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758960 YP_005231194.1 CDS STMMW_01141 NC_016854.1 125688 126671 R pfam_scan;Pfam:PF01547; E()=6.5E-17;score=61.7;query40-272;description=SBP_bac_1; thiamine-binding periplasmic protein complement(125688..126671) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758961 YP_005231195.1 CDS STMMW_01151 NC_016854.1 126849 128507 R pfam_scan;Pfam:PF00496; E()=1.3E-28;score=99.8;query163-464;description=SBP_bac_5; putative ABC transporter periplasmic solute binding protein complement(126849..128507) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758962 YP_005231196.1 CDS STMMW_01161 NC_016854.1 129058 129663 R pfam_scan;Pfam:PF00694; E()=5.4E-45;score=152.1;query 3-126;description=Aconitase_C; 3-isopropylmalate dehydratase small subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; 3-isopropylmalate dehydratase complement(129058..129663) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758963 YP_005231197.1 CDS STMMW_01171 NC_016854.1 129674 131074 R pfam_scan;Pfam:PF00330; E()=4.5E-199;score=661.4;query 4-457;description=Aconitase; 3-isopropylmalate dehydratase large subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; 3-isopropylmalate dehydratase complement(129674..131074) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758964 YP_005231198.1 CDS STMMW_01181 NC_016854.1 131077 132168 R pfam_scan;Pfam:PF00180; E()=1.1E-153;score=510.8;query 6-355;description=Iso_dh; 3-isopropylmalate dehydrogenase; Beta-IPM dehydrogenase; IMDH; 3-IPM-DH complement(131077..132168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758965 YP_005231199.1 CDS STMMW_01191 NC_016854.1 132168 133739 R pfam_scan;Pfam:PF00682; E()=4.3E-96;score=321.0;query 13-251;description=HMGL-like; pfam_scan;Pfam:PF08502; E()=1.3E-44;score=151.3;query 369-500;description=LeuA_dimer; Alpha-IPM synthetase; Alpha-isopropylmalate synthase; 2-isopropylmalate synthase complement(132168..133739) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758966 YP_005231200.1 CDS STMMW_01201 NC_016854.1 133827 133913 R pfam_scan;Pfam:PF08054; E()=1.4E-17;score=62.3;query1-28;description=Leu_leader; leu operon leader peptide complement(133827..133913) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758967 YP_005231201.1 CDS STMMW_01211 NC_016854.1 134570 135514 D pfam_scan;Pfam:PF00126; E()=1.1E-17;score=63.3;query24-82;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.4E-16;score=58.2;query133- 311;description=LysR_substrate; activator protein in leuABCD operon 134570..135514 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758968 YP_005231202.1 CDS STMMW_01221 NC_016854.1 135899 137560 D pfam_scan;Pfam:PF00205; E()=3.4E-50;score=168.6;query 175-310;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=5.8E-56;score=188.5;query 1-146;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=2.4E-54;score=183.0;query 373-524;description=TPP_enzyme_C; acetolactate synthase isozyme III large subunit 135899..137560 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758969 YP_005231203.1 CDS STMMW_01231 NC_016854.1 137563 138054 D pfam_scan;Pfam:PF01842; E()=2.8E-15;score=55.8;query4-68;description=ACT; pfam_scan;Pfam:PF10369; E()=9.7E-26;score=88.9;query83-158;description=ALS_ss_C; acetolactate synthase isozyme III small subunit 137563..138054 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758970 YP_005231204.1 CDS STMMW_01241 NC_016854.1 138338 139342 D pfam_scan;Pfam:PF00356; E()=2.5E-16;score=59.0;query3-50;description=LacI; pfam_scan;Pfam:PF00532; E()=1.9E-14;score=53.0;query62- 312;description=Peripla_BP_1; fructose repressor 138338..139342 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758971 YP_005231205.1 CDS STMMW_01251 NC_016854.1 139948 140406 D pfam_scan;Pfam:PF02381; E()=2.7E-19;score=67.8;query1-75;description=MraZ; protein mraZ; protein 139948..140406 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758972 YP_005231206.1 CDS STMMW_01261 NC_016854.1 140408 141349 D pfam_scan;Pfam:PF01795; E()=3.5E-125;score=416.5;query 5-310;description=Methyltransf_5; S-adenosyl-methyltransferase 140408..141349 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758973 YP_005231207.1 CDS STMMW_01271 NC_016854.1 141346 141711 D pfam_scan;Pfam:PF04999; E()=1.9E-35;score=119.9;query 26-119;description=FtsL; tmhmm; query 1-122; cell division protein FtsL 141346..141711 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758974 YP_005231208.1 CDS STMMW_01281 NC_016854.1 141727 143493 D pfam_scan;Pfam:PF00905; E()=1.8E-90;score=302.5;query 260-554;description=Transpeptidase; pfam_scan;Pfam:PF03717; E()=4.7E-41;score=140.2;query 68-220;description=PBP_dimer; tmhmm; query 1-589; penicillin-binding protein 3 141727..143493 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758975 YP_005231209.1 CDS STMMW_01291 NC_016854.1 143480 144967 D pfam_scan;Pfam:PF08245; E()=2.1E-47;score=161.2;query 112-318;description=Mur_ligase_M; pfam_scan;Pfam:PF01225; E()=2.2E-13;score=49.7;query24-102;description=Mur_ligase; pfam_scan;Pfam:PF02875; E()=2.2E-29;score=101.0;query 339-425;description=Mur_ligase_C; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-dia minopim ligase; UDP-N-acetylmuramyl-tripeptide synthetase; Meso-diaminopimelate-adding enzyme 143480..144967 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758976 YP_005231210.1 CDS STMMW_01301 NC_016854.1 144964 146322 D pfam_scan;Pfam:PF08245; E()=1.9E-51;score=174.4;query 103-292;description=Mur_ligase_M; pfam_scan;Pfam:PF01225; E()=9.1E-17;score=60.5;query27-94;description=Mur_ligase; pfam_scan;Pfam:PF02875; E()=1.5E-11;score=44.0;query313- 391;description=Mur_ligase_C; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alan alanyl ligase 144964..146322 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758977 YP_005231211.1 CDS STMMW_01311 NC_016854.1 146316 147398 D pfam_scan;Pfam:PF00953; E()=3.0E-33;score=115.0;query 99-284;description=Glycos_transf_4; pfam_scan;Pfam:PF10555; E()=8.9E-5;score=21.5;query 68-80;description=MraY_sig1; tmhmm; query 1-361; UDP-MurNAc-pentapeptide phosphotransferase. Putative phospho-N-acetylmuramoyl-pentapeptide-transferase EC 2.7.8.13; UDP-MurNAc-pentapeptide phosphotransferase 146316..147398 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758978 YP_005231212.1 CDS STMMW_01321 NC_016854.1 147401 148717 D pfam_scan;Pfam:PF08245; E()=9.7E-41;score=139.5;query 108-280;description=Mur_ligase_M; pfam_scan;Pfam:PF02875; E()=2.3E-9;score=37.0;query 301-368;description=Mur_ligase_C; tmhmm; query 1-439; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; UDP-N-acetylmuramoylalanine--D-glutamate ligase; D-glutamic acid adding enzyme 147401..148717 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758979 YP_005231213.1 CDS STMMW_01331 NC_016854.1 148804 149961 D pfam_scan;Pfam:PF01098; E()=2.7E-132;score=440.5;query 18-373;description=FTSW_RODA_SPOVE; tmhmm; query 1-386; cell division protein FtsW 148804..149961 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758980 YP_005231214.1 CDS STMMW_01341 NC_016854.1 149958 151025 D pfam_scan;Pfam:PF03033; E()=6.1E-42;score=142.4;query 9-145;description=Glyco_transf_28; pfam_scan;Pfam:PF04101; E()=4.8E-35;score=120.4;query 185-344;description=Glyco_tran_28_C; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferase EC 2.4.1.227; UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 149958..151025 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758981 YP_005231215.1 CDS STMMW_01351 NC_016854.1 151144 152619 D pfam_scan;Pfam:PF08245; E()=3.8E-30;score=104.9;query 122-304;description=Mur_ligase_M; pfam_scan;Pfam:PF01225; E()=1.6E-22;score=78.9;query21-119;description=Mur_ligase; pfam_scan;Pfam:PF02875; E()=4.9E-15;score=55.1;query337- 417;description=Mur_ligase_C; UDP-N-acetylmuramate:alanine ligase; UDP-N-acetylmuramoyl-L-alanine synthetase; UDP-N-acetylmuramate--L-alanine ligase 151144..152619 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758982 YP_005231216.1 CDS STMMW_01361 NC_016854.1 152612 153532 D pfam_scan;Pfam:PF07478; E()=4.3E-71;score=238.6;query 96-303;description=Dala_Dala_lig_C; pfam_scan;Pfam:PF01820; E()=1.2E-8;score=34.8;query 4-44;description=Dala_Dala_lig_N; D-alanine--D-alanine ligase 152612..153532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758983 YP_005231217.1 CDS STMMW_01371 NC_016854.1 153534 154364 D pfam_scan;Pfam:PF03799; E()=2.2E-30;score=104.8;query 129-247;description=FtsQ; pfam_scan;Pfam:PF08478; E()=5.5E-19;score=67.8;query57-126;description=POTRA_1; tmhmm; query 1-277; cell division protein FtsQ 153534..154364 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758984 YP_005231218.1 CDS STMMW_01381 NC_016854.1 154361 155623 D pfam_scan;Pfam:PF02491; E()=8.2E-35;score=119.8;query 10-195;description=FtsA; cell division protein FtsA 154361..155623 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758985 YP_005231219.1 CDS STMMW_01391 NC_016854.1 155684 156835 D pfam_scan;Pfam:PF03953; E()=5.4E-28;score=97.2;query206-318;description=Tubulin_C; pfam_scan;Pfam:PF00091; E()=8.8E-68;score=227.7;query 13-203;description=Tubulin; cell division protein FtsZ 155684..156835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758986 YP_005231220.1 CDS STMMW_01401 NC_016854.1 156936 157853 D pfam_scan;Pfam:PF03331; E()=1.2E-123;score=411.0;query 2-280;description=LpxC; UDP-3-O-acyl-GlcNAc deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 156936..157853 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758987 YP_005231221.1 CDS STMMW_01411 NC_016854.1 158201 158629 D pfam_scan;Pfam:PF06558; E()=7.6E-61;score=203.7;query 1-142;description=SecM; hypothetical protein 158201..158629 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758988 YP_005231222.1 CDS STMMW_01421 NC_016854.1 158691 161396 D pfam_scan;Pfam:PF01043; E()=3.2E-41;score=140.3;query 229-358;description=SecA_PP_bind; pfam_scan;Pfam:PF07516; E()=3.1E-81;score=271.9;query 617-831;description=SecA_SW; pfam_scan;Pfam:PF02810; E()=9.6E-11;score=39.7;query881-900;description=SEC-C; pfam_scan;Pfam:PF07517; E()=4.1E-125;score=416.0;query 8-401;description=SecA_DEAD; preprotein translocase subunit SecA 158691..161396 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758989 YP_005231223.1 CDS STMMW_01431 NC_016854.1 161548 161943 D pfam_scan;Pfam:PF00293; E()=2.2E-28;score=98.3;query6-127;description=NUDIX; 7,8-dihydro-8-oxoguanine-triphosphatase 161548..161943 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758990 YP_005231224.1 CDS STMMW_01441 NC_016854.1 162265 162456 R pfam_scan;Pfam:PF03884; E()=1.7E-24;score=84.5;query7-60;description=DUF329; hypothetical protein complement(162265..162456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758991 YP_005231225.1 CDS STMMW_01451 NC_016854.1 162466 163209 R pfam_scan;Pfam:PF07072; E()=9.6E-76;score=253.6;query 19-225;description=DUF1342; hypothetical protein complement(162466..163209) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758992 YP_005231226.1 CDS STMMW_01461 NC_016854.1 163209 163829 R pfam_scan;Pfam:PF01121; E()=1.5E-75;score=252.3;query 4-177;description=CoaE; dephospho-CoA kinase complement(163209..163829) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758993 YP_005231227.1 CDS STMMW_01471 NC_016854.1 164055 165098 D pfam_scan;Pfam:PF00478; E()=2.9E-107;score=358.2;query 9-342;description=IMPDH; Guanosine 5'-monophosphate oxidoreductase; Guanosine monophosphate reductase; GMP reductase 164055..165098 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758994 YP_005231228.1 CDS STMMW_01481 NC_016854.1 165129 166331 R pfam_scan;Pfam:PF00482; E()=2.6E-31;score=107.8;query 64-186;description=GSPII_F; tmhmm; query 1-401; protein transport protein HofC complement(165129..166331) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758995 YP_005231229.1 CDS STMMW_01491 NC_016854.1 166321 167706 R pfam_scan;Pfam:PF05157; E()=5.6E-6;score=26.1;query 9-60;description=GSPII_E_N; pfam_scan;Pfam:PF00437; E()=2.2E-85;score=285.8;query 80-353;description=GSPII_E; protein transport protein HofB complement(166321..167706) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758996 YP_005231230.1 CDS STMMW_01501 NC_016854.1 167716 168153 R pfam_scan;Pfam:PF00114; E()=3.7E-5;score=24.2;query 36-126;description=Pilin; pfam_scan;Pfam:PF07963; E()=8.2E-7;score=28.7;query 5-24;description=N_methyl; tmhmm; query 1-146; prepilin peptidase dependent protein D precursor complement(167716..168153) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758997 YP_005231231.1 CDS STMMW_01511 NC_016854.1 168375 169121 R pfam_scan;Pfam:PF02749; E()=4.2E-24;score=83.8;query2-80;description=QRPTase_N; pfam_scan;Pfam:PF01729; E()=5.9E-66;score=220.8;query 82-246;description=QRPTase_C; nicotinate-nucleotide pyrophosphorylase complement(168375..169121) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758998 YP_005231232.1 CDS STMMW_01521 NC_016854.1 169356 169919 D pfam_scan;Pfam:PF01510; E()=8.0E-25;score=86.8;query22-168;description=Amidase_2; AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase) 169356..169919 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11758999 YP_005231233.1 CDS STMMW_01531 NC_016854.1 169916 170770 D pfam_scan;Pfam:PF03186; E()=6.2E-7;score=28.2;query 29-223;description=CobD_Cbib; tmhmm; query 1-285; AmpE protein 169916..170770 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759000 YP_005231234.1 CDS STMMW_01541 NC_016854.1 170862 171812 R pfam_scan;Pfam:PF04616; E()=8.3E-74;score=247.8;query 5-306;description=Glyco_hydro_43; glycosyl hydrolase complement(170862..171812) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759001 YP_005231235.1 CDS STMMW_01551 NC_016854.1 171812 173218 R pfam_scan;Pfam:PF07690; E()=1.7E-12;score=46.9;query25-347;description=MFS_1; tmhmm; query 1-469; putative symporter complement(171812..173218) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759002 YP_005231236.1 CDS STMMW_01561 NC_016854.1 173382 174755 R pfam_scan;Pfam:PF00324; E()=2.6E-140;score=467.4;query 19-454;description=AA_permease; tmhmm; query 1-458; aromatic amino acid transport protein AroP complement(173382..174755) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759003 YP_005231237.1 CDS STMMW_01571 NC_016854.1 175318 176082 D pfam_scan;Pfam:PF00392; E()=9.2E-25;score=85.9;query12-74;description=GntR; pfam_scan;Pfam:PF07729; E()=6.9E-18;score=64.4;query99-226;description=FCD; pyruvate dehydrogenase complex repressor 175318..176082 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759004 YP_005231238.1 CDS STMMW_01581 NC_016854.1 176242 178905 D pfam_scan;Pfam:PF00456; E()=2.6E-13;score=48.9;query84- 294;description=Transketolase_N; pyruvate dehydrogenase E1 component 176242..178905 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759005 YP_005231239.1 CDS STMMW_01591 NC_016854.1 178920 180809 D pfam_scan;Pfam:PF02817; E()=2.3E-15;score=55.0;query326- 362;description=E3_binding; pfam_scan;Pfam:PF00364; E()=4.2E-21;score=74.2;query4- 73;description=Biotin_lipoyl; pfam_scan;Pfam:PF00198; E()=3.9E-80;score=268.0;query 398-629;description=2-oxoacid_dh; dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase 178920..180809 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759006 YP_005231240.1 CDS STMMW_01601 NC_016854.1 181009 182433 D pfam_scan;Pfam:PF07992; E()=2.3E-64;score=217.2;query 8-317;description=Pyr_redox_2; pfam_scan;Pfam:PF02852; E()=2.9E-37;score=126.5;query 347-455;description=Pyr_redox_dim; pfam_scan;Pfam:PF00070; E()=2.9E-17;score=62.6;query177-272;description=Pyr_redox; dihydrolipoamide dehydrogenase 181009..182433 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759007 YP_005231241.1 CDS STMMW_01611 NC_016854.1 182722 183006 D Signal peptide; signalp; query 1-22;cleavage_site_probability=1.000; 1.000; secreted protein 182722..183006 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759008 YP_005231242.1 CDS STMMW_01621 NC_016854.1 183044 183835 R pfam_scan;Pfam:PF11453; E()=2.1E-93;score=312.1;query 20-261;description=DUF2950; secreted protein complement(183044..183835) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759009 YP_005231243.1 CDS STMMW_01641 NC_016854.1 185851 188448 D pfam_scan;Pfam:PF06434; E()=5.4E-103;score=342.1;query 168-382;description=Aconitase_2_N; pfam_scan;Pfam:PF11791; E()=1.2E-72;score=242.2;query 4-156;description=Aconitase_B_N; pfam_scan;Pfam:PF00330; E()=2.0E-8;score=32.9;query 473-697;description=Aconitase; aconitate hydratase 2 185851..188448 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759011 YP_005231244.1 CDS STMMW_01651 NC_016854.1 188509 189351 R HNH endonuclease complement(188509..189351) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759012 YP_005231245.1 CDS STMMW_01661 NC_016854.1 189597 189959 D pfam_scan;Pfam:PF06062; E()=2.8E-41;score=140.1;query 1-117;description=UPF0231; hypothetical protein 189597..189959 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759013 YP_005231246.1 CDS STMMW_01671 NC_016854.1 190194 191147 D pfam_scan;Pfam:PF03812; E()=4.7E-88;score=295.1;query 1-306;description=KdgT; tmhmm; query 1-318; KDG permease; 2-keto-3-deoxygluconate permease 190194..191147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759014 YP_005231247.1 CDS STMMW_01681 NC_016854.1 191144 192415 D pfam_scan;Pfam:PF07005; E()=4.1E-47;score=160.1;query 156-374;description=DUF1537; hypothetical protein 191144..192415 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759015 YP_005231248.1 CDS STMMW_01691 NC_016854.1 192405 193388 D pfam_scan;Pfam:PF04166; E()=7.4E-98;score=327.1;query 35-323;description=PdxA; 4-phosphohydroxy-L-threonine dehydrogenase; PdxA-like protein; 4-hydroxythreonine-4-phosphate dehydrogenase 192405..193388 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759016 YP_005231249.1 CDS STMMW_01701 NC_016854.1 193398 194165 D pfam_scan;Pfam:PF00455; E()=2.7E-40;score=137.2;query 77-231;description=DeoR; pfam_scan;Pfam:PF08220; E()=3.2E-17;score=61.2;query6-58;description=HTH_DeoR; putative transcriptional regulator 193398..194165 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759017 YP_005231250.1 CDS STMMW_01711 NC_016854.1 194195 194989 R pfam_scan;Pfam:PF02675; E()=3.6E-25;score=87.2;query40-169;description=AdoMet_dc; hypothetical protein complement(194195..194989) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759018 YP_005231251.1 CDS STMMW_01721 NC_016854.1 195010 195870 R pfam_scan;Pfam:PF01564; E()=1.0E-98;score=328.7;query 6-239;description=Spermine_synth; SPDSY; SPDSY. spermidine synthase EC 2.5.1.16; Putrescine aminopropyltransferase complement(195010..195870) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759019 YP_005231252.1 CDS STMMW_01731 NC_016854.1 195977 196324 R pfam_scan;Pfam:PF09691; E()=1.6E-8;score=34.3;query 26-106;description=PulS_OutS; hypothetical protein complement(195977..196324) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759020 YP_005231253.1 CDS STMMW_01741 NC_016854.1 196526 198136 D pfam_scan;Pfam:PF07731; E()=2.3E-18;score=65.5;query431-536;description=Cu- oxidase_2; pfam_scan;Pfam:PF07732; E()=5.7E-29;score=99.7;query53-166;description=Cu- oxidase_3; multicopper oxidase precursor 196526..198136 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759021 YP_005231254.1 CDS STMMW_01751 NC_016854.1 198214 200604 R pfam_scan;Pfam:PF01011; E()=1.1E-9;score=36.9;query 225-261;description=PQQ; pfam_scan;Pfam:PF10527; E()=4.7E-21;score=72.8;query165-207;description=PQQ_N; pfam_scan;Pfam:PF10535; E()=9.2E-7;score=28.0;query 404-425;description=PQQ_C; tmhmm; query 1-797; glucose dehydrogenase complement(198214..200604) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759022 YP_005231255.1 CDS STMMW_01761 NC_016854.1 200810 201346 D pfam_scan;Pfam:PF00156; E()=1.6E-21;score=76.0;query13- 128;description=Pribosyltran; hypoxanthine phosphoribosyltransferase 200810..201346 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759023 YP_005231256.1 CDS STMMW_01771 NC_016854.1 201404 202066 R pfam_scan;Pfam:PF00484; E()=2.9E-52;score=176.0;query 37-187;description=Pro_CA; carbonic anhydrase complement(201404..202066) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759024 YP_005231257.1 CDS STMMW_01781 NC_016854.1 202175 203101 D pfam_scan;Pfam:PF00005; E()=1.4E-43;score=149.0;query 31-197;description=ABC_tran; ABC transporter ATP-binding protein 202175..203101 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759025 YP_005231258.1 CDS STMMW_01791 NC_016854.1 203098 203868 D pfam_scan;Pfam:PF01061; E()=3.6E-36;score=124.2;query 9-219;description=ABC2_membrane; tmhmm; query 1-257; ABC transporter 203098..203868 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759026 YP_005231259.1 CDS STMMW_01801 NC_016854.1 203985 205064 R pfam_scan;Pfam:PF00419; E()=7.5E-8;score=32.7;query 212-357;description=Fimbrial; putative fimbriae complement(203985..205064) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759027 YP_005231260.1 CDS STMMW_01811 NC_016854.1 205073 207619 R pfam_scan;Pfam:PF00577; E()=1.7E-264;score=878.8;query 33-831;description=Usher; tmhmm; query 1-849; putativie fimbrial usher. putativie fimbrial usher complement(205073..207619) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759028 YP_005231261.1 CDS STMMW_01821 NC_016854.1 207646 208329 R pfam_scan;Pfam:PF00345; E()=6.4E-41;score=138.8;query 23-142;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=2.3E-24;score=84.8;query149- 223;description=Pili_assembly_C; putative fimbrial chaperone complement(207646..208329) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759029 YP_005231262.1 CDS STMMW_01831 NC_016854.1 208377 208916 R pfam_scan;Pfam:PF00419; E()=2.1E-29;score=102.6;query 29-179;description=Fimbrial; putative fimbrial subunit complement(208377..208916) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759030 YP_005231263.1 CDS STMMW_01841 NC_016854.1 209286 209726 D pfam_scan;Pfam:PF03610; E()=5.6E-25;score=87.0;query3-117;description=EIIA-man; putative PTS system IIA component 209286..209726 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759031 YP_005231264.1 CDS STMMW_01851 NC_016854.1 209788 211017 D pfam_scan;Pfam:PF01522; E()=1.3E-20;score=72.8;query228- 366;description=Polysacc_deac_1; tmhmm; query 1-410; hypothetical protein 209788..211017 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759032 YP_005231265.1 CDS STMMW_01861 NC_016854.1 211024 211404 R pfam_scan;Pfam:PF02261; E()=1.1E-49;score=166.8;query 1-115;description=Asp_decarbox; aspartate 1-decarboxylase; Aspartate alpha-decarboxylase complement(211024..211404) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759033 YP_005231266.1 CDS STMMW_01871 NC_016854.1 211499 212353 R pfam_scan;Pfam:PF02569; E()=4.4E-116;score=386.5;query 3-280;description=Pantoate_ligase; pantoate--beta-alanine ligase; pantoate:beta-alanine ligase; pantothenate synthetase; Pantoate activating enzyme complement(211499..212353) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759034 YP_005231267.1 CDS STMMW_01881 NC_016854.1 212479 213270 R pfam_scan;Pfam:PF02548; E()=2.2E-107;score=357.6;query 3-259;description=Pantoate_transf; ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(212479..213270) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759035 YP_005231268.1 CDS STMMW_01891 NC_016854.1 213391 213870 R pfam_scan;Pfam:PF01288; E()=4.5E-45;score=152.5;query 5-132;description=HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(213391..213870) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759036 YP_005231269.1 CDS STMMW_01901 NC_016854.1 213867 215285 R pfam_scan;Pfam:PF01743; E()=6.6E-41;score=139.0;query 69-200;description=PolyA_pol; poly(A) polymerase complement(213867..215285) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759037 YP_005231270.1 CDS STMMW_01911 NC_016854.1 215426 216367 R pfam_scan;Pfam:PF00749; E()=4.1E-49;score=166.5;query 24-273;description=tRNA-synt_1c; glutamyl-tRNA synthetase complement(215426..216367) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759038 YP_005231271.1 CDS STMMW_01921 NC_016854.1 216391 216846 R pfam_scan;Pfam:PF01258; E()=2.0E-13;score=48.9;query110-145;description=zf- dskA_traR; dosage-dependent dnaK suppressor protein complement(216391..216846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759039 YP_005231272.1 CDS STMMW_01931 NC_016854.1 217023 217727 R pfam_scan;Pfam:PF03749; E()=8.3E-79;score=263.6;query 13-230;description=SfsA; Sugar fermentation stimulation protein complement(217023..217727) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759040 YP_005231273.1 CDS STMMW_01941 NC_016854.1 217744 218274 R pfam_scan;Pfam:PF02834; E()=1.1E-12;score=47.2;query11- 89;description=2_5_RNA_ligase; 2'-5' RNA ligase complement(217744..218274) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759041 YP_005231274.1 CDS STMMW_01951 NC_016854.1 218302 220776 D pfam_scan;Pfam:PF00271; E()=6.9E-8;score=31.5;query 257-342;description=Helicase_C; pfam_scan;Pfam:PF08482; E()=1.5E-55;score=186.4;query 679-811;description=HrpB_C; pfam_scan;Pfam:PF04408; E()=1.1E-6;score=28.5;query 404-460;description=HA2; pfam_scan;Pfam:PF00270; E()=1.5E-10;score=40.6;query30-175;description=DEAD; ATP-dependent helicase HrpB 218302..220776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759042 YP_005231275.1 CDS STMMW_01961 NC_016854.1 220917 223439 D pfam_scan;Pfam:PF00905; E()=9.7E-29;score=99.8;query468- 727;description=Transpeptidase; pfam_scan;Pfam:PF00912; E()=9.9E-59;score=197.0;query 202-375;description=Transgly; tmhmm; query 1-841; peptidoglycan synthetase; penicillin-binding protein 1B 220917..223439 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759043 YP_005231276.1 CDS STMMW_01971 NC_016854.1 223732 225921 D pfam_scan;Pfam:PF07715; E()=4.8E-26;score=90.6;query76-181;description=Plug; pfam_scan;Pfam:PF00593; E()=4.2E-43;score=147.8;query 490-729;description=TonB_dep_Rec; ferrichrome-iron receptor 223732..225921 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759044 YP_005231277.1 CDS STMMW_01981 NC_016854.1 225970 226767 D pfam_scan;Pfam:PF00005; E()=3.2E-43;score=147.8;query 37-209;description=ABC_tran; ferrichrome transport ATP-binding protein FhuC 225970..226767 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759045 YP_005231278.1 CDS STMMW_01991 NC_016854.1 226767 227657 D pfam_scan;Pfam:PF01497; E()=1.0E-26;score=93.1;query38- 270;description=Peripla_BP_2; ferrichrome-binding periplasmic protein 226767..227657 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759046 YP_005231279.1 CDS STMMW_02001 NC_016854.1 227654 229711 D pfam_scan;Pfam:PF01032; E()=1.4E-70;score=237.7;query 42-349;description=FecCD; tmhmm; query 1-686; ferrichrome transport protein FhuB precursor 227654..229711 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759047 YP_005231280.1 CDS STMMW_02011 NC_016854.1 230650 231210 D pfam_scan;Pfam:PF00419; E()=6.0E-27;score=94.7;query29-185;description=Fimbrial; major fimbrial subunit stfa (putative fimbrial subunit) 230650..231210 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759048 YP_005231281.1 CDS STMMW_02021 NC_016854.1 231296 233953 D pfam_scan;Pfam:PF00577; E()=6.1E-265;score=880.3;query 34-830;description=Usher; outer membrane usher protein stfc (putative fimbrial outer membrane usher) 231296..233953 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759049 YP_005231282.1 CDS STMMW_02031 NC_016854.1 233971 234723 D pfam_scan;Pfam:PF00345; E()=1.0E-35;score=122.0;query 27-144;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=5.7E-10;score=38.8;query156- 228;description=Pili_assembly_C; tmhmm; query 1-251; periplasmic fimbrial chaperone stfd 233971..234723 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759050 YP_005231283.1 CDS STMMW_02041 NC_016854.1 234787 235254 D minor fimbrial subunit StfE 234787..235254 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759051 YP_005231284.1 CDS STMMW_02051 NC_016854.1 235251 235727 D pfam_scan;Pfam:PF00419; E()=2.7E-6;score=27.6;query 21-158;description=Fimbrial; minor fimbrial subunit stff 235251..235727 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759052 YP_005231285.1 CDS STMMW_02061 NC_016854.1 235727 236257 D pfam_scan;Pfam:PF00419; E()=1.4E-19;score=70.7;query28-175;description=Fimbrial; tmhmm; query 1-177; putative minor fimbrial subunit 235727..236257 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759053 YP_005231286.1 CDS STMMW_02071 NC_016854.1 236257 237096 D pfam_scan;Pfam:PF11245; E()=1.3E-91;score=305.6;query 50-279;description=DUF2544; hypothetical protein 236257..237096 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759054 YP_005231287.1 CDS STMMW_02081 NC_016854.1 237203 238483 R pfam_scan;Pfam:PF00202; E()=9.7E-75;score=251.1;query 35-360;description=Aminotran_3; GSA-AT; GSA-AT. glutamate-1-semialdehyde 2,1-aminomutase EC 5.4.3.8; glutamate-1-semialdehyde aminotransferase; GSA complement(237203..238483) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759055 YP_005231288.1 CDS STMMW_02091 NC_016854.1 238653 240074 D pfam_scan;Pfam:PF00654; E()=1.3E-95;score=319.9;query 89-437;description=Voltage_CLC; tmhmm; query 1-474; H+/Cl-exchange transporter clcA 238653..240074 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759056 YP_005231289.1 CDS STMMW_02101 NC_016854.1 240111 240500 D pfam_scan;Pfam:PF01521; E()=2.0E-29;score=101.1;query 24-115;description=Fe-S_biosyn; hypothetical protein 240111..240500 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759057 YP_005231290.1 CDS STMMW_02111 NC_016854.1 240601 241224 R pfam_scan;Pfam:PF03458; E()=6.8E-26;score=89.5;query4-80;description=UPF0126; tmhmm; query 1-208; hypothetical protein complement(240601..241224) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759058 YP_005231291.1 CDS STMMW_02121 NC_016854.1 241261 242061 R pfam_scan;Pfam:PF01497; E()=2.6E-28;score=98.3;query26- 217;description=Peripla_BP_2; tmhmm; query 1-267; cobalamin periplasmic binding protein; Vitamin B12 transport protein btuF precursor complement(241261..242061) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759059 YP_005231292.1 CDS STMMW_02131 NC_016854.1 242054 242752 R pfam_scan;Pfam:PF01048; E()=9.1E-55;score=185.0;query 2-226;description=PNP_UDP_1; MTA/SAH nucleosidase complement(242054..242752) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759060 YP_005231293.1 CDS STMMW_02141 NC_016854.1 242837 244354 D pfam_scan;Pfam:PF01966; E()=3.4E-8;score=33.0;query 66-146;description=HD; dGTP triphosphohydrolase. deoxyguanosinetriphosphate triphosphohydrolase EC 3.1.5.1; dGTPase; dGTP triphosphohydrolase 242837..244354 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759061 YP_005231294.1 CDS STMMW_02151 NC_016854.1 244484 245911 D pfam_scan;Pfam:PF00089; E()=6.5E-21;score=74.3;query112-276;description=Trypsin; pfam_scan;Pfam:PF00595; E()=1.0E-14;score=53.5;query286-367;description=PDZ; protease DO; heat shock protein HtrA 244484..245911 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759062 YP_005231295.1 CDS STMMW_02161 NC_016854.1 246064 247221 D pfam_scan;Pfam:PF05651; E()=6.9E-53;score=177.6;query 6-140;description=Diacid_rec; hypothetical protein 246064..247221 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759063 YP_005231296.1 CDS STMMW_02171 NC_016854.1 247310 247696 R hypothetical protein complement(247310..247696) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759064 YP_005231297.1 CDS STMMW_02181 NC_016854.1 247943 249244 D pfam_scan;Pfam:PF00083; E()=1.1E-22;score=79.9;query51-220;description=Sugar_tr; tmhmm; query 1-434; putative inner membrane protein 247943..249244 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759065 YP_005231298.1 CDS STMMW_02191 NC_016854.1 249281 250105 R 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(249281..250105) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759066 YP_005231299.1 CDS STMMW_02201 NC_016854.1 250135 252807 R pfam_scan;Pfam:PF01909; E()=3.3E-9;score=36.0;query 83-156;description=NTP_transf_2; pfam_scan;Pfam:PF01842; E()=6.0E-9;score=35.6;query 708-763;description=ACT; pfam_scan;Pfam:PF08335; E()=1.6E-46;score=157.0;query 192-331;description=GlnD_UR_UTase; pfam_scan;Pfam:PF01966; E()=1.8E-13;score=49.9;query468-599;description=HD; [protein-PII] uridylyltransferase; uridylyl removing enzyme; PII uridylyl-transferase complement(250135..252807) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759067 YP_005231300.1 CDS STMMW_02211 NC_016854.1 253044 253838 R pfam_scan;Pfam:PF00557; E()=6.6E-54;score=182.3;query 12-242;description=Peptidase_M24; methionine aminopeptidase complement(253044..253838) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759068 YP_005231301.1 CDS STMMW_02221 NC_016854.1 254289 255014 D pfam_scan;Pfam:PF00318; E()=9.7E-99;score=328.4;query 9-225;description=Ribosomal_S2; 30S ribosomal protein S2 254289..255014 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759069 YP_005231302.1 CDS STMMW_02231 NC_016854.1 255272 256123 D pfam_scan;Pfam:PF00889; E()=5.4E-74;score=247.9;query 57-263;description=EF_TS; pfam_scan;Pfam:PF00627; E()=2.4E-11;score=42.6;query4-39;description=UBA; elongation factor Ts; EF-Ts 255272..256123 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759070 YP_005231303.1 CDS STMMW_02241 NC_016854.1 256268 256993 D pfam_scan;Pfam:PF00696; E()=4.1E-30;score=104.9;query 10-219;description=AA_kinase; uridine 5'-monophosphate kinase; uridylate kinase; UMP kinase 256268..256993 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759071 YP_005231304.1 CDS STMMW_02251 NC_016854.1 257140 257697 D pfam_scan;Pfam:PF01765; E()=2.0E-70;score=235.2;query 19-183;description=RRF; ribosome recycling factor; ribosome releasing factor; RRF 257140..257697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759072 YP_005231305.1 CDS STMMW_02261 NC_016854.1 257838 259034 D pfam_scan;Pfam:PF02670; E()=6.3E-50;score=168.6;query 4-132;description=DXP_reductoisom; pfam_scan;Pfam:PF08436; E()=2.7E-32;score=110.0;query 146-239;description=DXP_redisom_C; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 257838..259034 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759073 YP_005231306.1 CDS STMMW_02271 NC_016854.1 259347 260105 D pfam_scan;Pfam:PF01255; E()=1.2E-88;score=295.9;query 23-243;description=Prenyltransf; undecaprenyl pyrophosphate synthetase 259347..260105 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759074 YP_005231307.1 CDS STMMW_02281 NC_016854.1 260118 260975 D pfam_scan;Pfam:PF01148; E()=6.0E-69;score=232.1;query 3-279;description=CTP_transf_1; tmhmm; query 1-286; phosphatidate cytidylyltransferase 260118..260975 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759075 YP_005231308.1 CDS STMMW_02291 NC_016854.1 260987 262339 D pfam_scan;Pfam:PF02163; E()=1.7E-71;score=239.0;query 10-446;description=Peptidase_M50; pfam_scan;Pfam:PF00595; E()=2.7E-10;score=39.4;query209-276;description=PDZ; tmhmm; query 1-451; hypothetical protein 260987..262339 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759076 YP_005231309.1 CDS STMMW_02301 NC_016854.1 262371 264785 D pfam_scan;Pfam:PF07244; E()=1.7E-7;score=31.6;query 24-91;description=Surf_Ag_VNR; pfam_scan;Pfam:PF01103; E()=4.1E-101;score=337.9;query 448-804;description=Bac_surface_Ag; outer membrane protein 262371..264785 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759077 YP_005231310.1 CDS STMMW_02311 NC_016854.1 264908 265393 D pfam_scan;Pfam:PF03938; E()=5.0E-29;score=100.8;query 10-160;description=OmpH; outer membrane protein OmpH 264908..265393 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759078 YP_005231311.1 CDS STMMW_02321 NC_016854.1 265397 266422 D pfam_scan;Pfam:PF00132; E()=0.017;score=14.8;query 127-143;description=Hexapep; pfam_scan;Pfam:PF04613; E()=1.6E-22;score=78.4;query21-90;description=LpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 265397..266422 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759079 YP_005231312.1 CDS STMMW_02331 NC_016854.1 266528 266983 D pfam_scan;Pfam:PF07977; E()=9.8E-47;score=157.2;query 17-141;description=FabA; 3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; 3R-hydroxymyristoyl ACP dehydrase; (3R)-hydroxymyristoyl-ACP dehydratase 266528..266983 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759080 YP_005231313.1 CDS STMMW_02341 NC_016854.1 266987 267775 D pfam_scan;Pfam:PF00132; E()=0.0018;score=17.8;query 17-34;description=Hexapep; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-[acyl-carrier-protein]:UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 266987..267775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759081 YP_005231314.1 CDS STMMW_02351 NC_016854.1 267775 268923 D pfam_scan;Pfam:PF02684; E()=2.0E-151;score=503.6;query 9-377;description=LpxB; lipid-A-disaccharide synthase 267775..268923 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759082 YP_005231315.1 CDS STMMW_02361 NC_016854.1 268920 269516 D pfam_scan;Pfam:PF01351; E()=4.1E-62;score=209.2;query 13-190;description=RNase_HII; ribonuclease HII; RNase HII 268920..269516 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759083 YP_005231316.1 CDS STMMW_02371 NC_016854.1 269540 273022 D pfam_scan;Pfam:PF01336; E()=1.4E-10;score=40.5;query1000- 1072;description=tRNA_anti; pfam_scan;Pfam:PF07733; E()=8.4E-208;score=690.3;query 238-735;description=DNA_pol3_alpha; pfam_scan;Pfam:PF02811; E()=1.4E-47;score=162.1;query 7-205;description=PHP; DNA polymerase III subunit alpha 269540..273022 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759084 YP_005231317.1 CDS STMMW_02381 NC_016854.1 273035 273994 D pfam_scan;Pfam:PF03255; E()=7.4E-64;score=213.5;query 5-151;description=ACCA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 273035..273994 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759085 YP_005231318.1 CDS STMMW_02391 NC_016854.1 274174 275937 D pfam_scan;Pfam:PF02839; E()=1.1E-4;score=21.5;query 532-558;description=CBM_5_12; pfam_scan;Pfam:PF00182; E()=1.7E-36;score=125.3;query 107-331;description=Glyco_hydro_19; pfam_scan;Pfam:PF00801; E()=1.9E-6;score=27.3;query 440-516;description=PKD; tmhmm; query 1-588; putative secreted chitinase 274174..275937 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759086 YP_005231319.1 CDS STMMW_02401 NC_016854.1 276013 278154 D pfam_scan;Pfam:PF03711; E()=5.5E-53;score=178.0;query 570-702;description=OKR_DC_1_C; pfam_scan;Pfam:PF01276; E()=1.7E-192;score=639.6;query 130-544;description=OKR_DC_1; pfam_scan;Pfam:PF03709; E()=3.7E-26;score=90.8;query14-124;description=OKR_DC_1_N; lysine decarboxylase 276013..278154 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759087 YP_005231320.1 CDS STMMW_02411 NC_016854.1 278210 278599 D pfam_scan;Pfam:PF00903; E()=1.6E-26;score=92.6;query7-126;description=Glyoxalase; hypothetical protein 278210..278599 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759088 YP_005231321.1 CDS STMMW_02421 NC_016854.1 278743 279954 D pfam_scan;Pfam:PF11734; E()=5.2E-25;score=86.3;query330-401;description=TilS_C; pfam_scan;Pfam:PF09179; E()=5.6E-24;score=83.1;query215-283;description=TilS; pfam_scan;Pfam:PF01171; E()=2.7E-49;score=166.6;query 1-165;description=ATP_bind_3; cell cycle protein MesJ 278743..279954 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759089 YP_005231322.1 CDS STMMW_02431 NC_016854.1 280038 280298 R pfam_scan;Pfam:PF07073; E()=5.1E-24;score=84.1;query9-83;description=ROF; ROF protein complement(280038..280298) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759090 YP_005231323.1 CDS STMMW_02441 NC_016854.1 280285 280503 R pfam_scan;Pfam:PF06786; E()=5.7E-33;score=112.0;query 8-72;description=UPF0253; hypothetical protein complement(280285..280503) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759091 YP_005231324.1 CDS STMMW_02451 NC_016854.1 280683 281228 D pfam_scan;Pfam:PF07152; E()=6.6E-72;score=240.3;query 1-175;description=YaeQ; hypothetical protein 280683..281228 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759092 YP_005231325.1 CDS STMMW_02461 NC_016854.1 281225 281647 D pfam_scan;Pfam:PF00472; E()=7.2E-30;score=102.8;query 3-132;description=RF-1; putative release factor 281225..281647 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759093 YP_005231326.1 CDS STMMW_02471 NC_016854.1 281679 282380 D pfam_scan;Pfam:PF04170; E()=1.2E-34;score=118.0;query 45-131;description=NlpE; copper homeostasis protein CutF precursor (lipoprotein nlpE) 281679..282380 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759094 YP_005231327.1 CDS STMMW_02481 NC_016854.1 282454 284172 R pfam_scan;Pfam:PF00587; E()=3.7E-52;score=175.7;query 50-217;description=tRNA-synt_2b; pfam_scan;Pfam:PF03129; E()=5.8E-21;score=73.9;query475- 568;description=HGTP_anticodon; pfam_scan;Pfam:PF04073; E()=4.9E-28;score=96.9;query257-376;description=YbaK; prolyl-tRNA synthetase complement(282454..284172) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759095 YP_005231328.1 CDS STMMW_02491 NC_016854.1 284283 284990 R pfam_scan;Pfam:PF01980; E()=4.8E-40;score=135.7;query 18-142;description=UPF0066; hypothetical protein complement(284283..284990) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759096 YP_005231329.1 CDS STMMW_02501 NC_016854.1 284987 285391 R Signal peptide; signalp; query 1-20;cleavage_site_probability=0.306; 0.667; RcsF protein complement(284987..285391) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759097 YP_005231330.1 CDS STMMW_02511 NC_016854.1 285510 286325 R pfam_scan;Pfam:PF03180; E()=1.2E-104;score=348.4;query 33-271;description=Lipoprotein_9; putative lipoprotein precursor complement(285510..286325) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759098 YP_005231331.1 CDS STMMW_02521 NC_016854.1 286364 287017 R pfam_scan;Pfam:PF00528; E()=7.7E-21;score=74.0;query31- 214;description=BPD_transp_1; tmhmm; query 1-218; ABC transporter permease complement(286364..287017) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759099 YP_005231332.1 CDS STMMW_02531 NC_016854.1 287010 288041 R pfam_scan;Pfam:PF00005; E()=4.6E-53;score=179.9;query 31-202;description=ABC_tran; pfam_scan;Pfam:PF09383; E()=1.6E-21;score=75.7;query268-340;description=NIL; putative ABC transporter ATP-binding protein complement(287010..288041) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759100 YP_005231333.1 CDS STMMW_02541 NC_016854.1 295056 295859 D pfam_scan;Pfam:PF00248; E()=1.4E-62;score=210.7;query 6-250;description=Aldo_ket_red; oxidoreductase 295056..295859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759107 YP_005231334.1 CDS STMMW_02551 NC_016854.1 295880 296794 R pfam_scan;Pfam:PF00126; E()=1.9E-20;score=72.0;query6-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.5E-45;score=152.9;query 89-292;description=LysR_substrate; transcriptional regulator complement(295880..296794) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759108 YP_005231335.1 CDS STMMW_02561 NC_016854.1 296899 298074 D pfam_scan;Pfam:PF07690; E()=8.9E-44;score=149.8;query 8-319;description=MFS_1; tmhmm; query 1-392; putative drug efflux protein 296899..298074 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759109 YP_005231336.1 CDS STMMW_02571 NC_016854.1 298227 299006 D pfam_scan;Pfam:PF03372; E()=2.0E-20;score=72.6;query37- 252;description=Exo_endo_phos; hypothetical protein 298227..299006 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759110 YP_005231337.1 CDS STMMW_02581 NC_016854.1 299084 299854 D pfam_scan;Pfam:PF08241; E()=2.3E-26;score=91.5;query49- 145;description=Methyltransf_11; putative methyltransferase 299084..299854 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759573 YP_005231338.1 CDS STMMW_02591 NC_016854.1 299910 301277 R pfam_scan;Pfam:PF01464; E()=1.9E-28;score=98.0;query106-218;description=SLT; pfam_scan;Pfam:PF06474; E()=4.7E-22;score=77.6;query1-95;description=MLTD_N; pfam_scan;Pfam:PF01476; E()=1.2E-14;score=53.5;query346-387;description=LysM; membrane-bound lytic murein transglycosylase D complement(299910..301277) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759574 YP_005231339.1 CDS STMMW_02601 NC_016854.1 301349 302104 R pfam_scan;Pfam:PF00753; E()=2.3E-36;score=124.6;query 9-165;description=Lactamase_B; hydroxyacylglutathione hydrolase complement(301349..302104) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759111 YP_005231340.1 CDS STMMW_02611 NC_016854.1 302139 302861 D pfam_scan;Pfam:PF08241; E()=3.1E-11;score=43.0;query55- 125;description=Methyltransf_11; hypothetical protein 302139..302861 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759112 YP_005231341.1 CDS STMMW_02621 NC_016854.1 302858 303325 R pfam_scan;Pfam:PF00075; E()=8.8E-41;score=138.8;query 3-141;description=RnaseH; ribonuclease H; RNase H complement(302858..303325) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759561 YP_005231342.1 CDS STMMW_02631 NC_016854.1 303389 304120 D pfam_scan;Pfam:PF00929; E()=9.1E-42;score=142.4;query 9-175;description=Exonuc_X-T; DNA polymerase III epsilon subunit 303389..304120 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759113 YP_005231343.1 CDS STMMW_02641 NC_016854.1 304651 305706 R pfam_scan;Pfam:PF06812; E()=6.6E-17;score=60.5;query51-110;description=ImpA-rel_N; pathogenicity island protein complement(304651..305706) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759114 YP_005231344.1 CDS STMMW_02651 NC_016854.1 305717 306712 R pfam_scan;Pfam:PF06996; E()=2.2E-100;score=335.1;query 10-310;description=DUF1305; type VI secretion protein complement(305717..306712) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759115 YP_005231345.1 CDS STMMW_02661 NC_016854.1 306709 308592 R pfam_scan;Pfam:PF05947; E()=9.9E-215;score=713.9;query 5-625;description=DUF879; type VI system protein complement(306709..308592) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759116 YP_005231346.1 CDS STMMW_02671 NC_016854.1 308608 309102 R pfam_scan;Pfam:PF04965; E()=5.5E-20;score=70.8;query36-146;description=GPW_gp25; putative type VI system cytoplasmic protein complement(308608..309102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759117 YP_005231347.1 CDS STMMW_02691 NC_016854.1 309099 309923 R pfam_scan;Pfam:PF07024; E()=4.3E-45;score=151.9;query 143-266;description=ImpE; putative type VI secretion system protein complement(309099..309923) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759118 YP_005231348.1 CDS STMMW_02701 NC_016854.1 309910 310812 R hypothetical protein complement(309910..310812) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759119 YP_005231349.1 CDS STMMW_02711 NC_016854.1 311180 313819 D pfam_scan;Pfam:PF10431; E()=1.2E-9;score=37.8;query 787-867;description=ClpB_D2-small; pfam_scan;Pfam:PF00004; E()=3.4E-8;score=33.2;query 236-349;description=AAA; pfam_scan;Pfam:PF07724; E()=4.7E-56;score=188.8;query 609-776;description=AAA_2; type VI system ATPase 311180..313819 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759120 YP_005231350.1 CDS STMMW_02731 NC_016854.1 313919 314461 D pfam_scan;Pfam:PF05591; E()=3.3E-60;score=202.0;query 11-164;description=DUF770; putative type VI secretion system protein 313919..314461 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759121 YP_005231351.1 CDS STMMW_02741 NC_016854.1 314485 315978 D pfam_scan;Pfam:PF05943; E()=2.1E-197;score=655.1;query 63-490;description=DUF877; type VI system secreted protein 314485..315978 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759122 YP_005231352.1 CDS STMMW_02751 NC_016854.1 316041 316151 D invasol 316041..316151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759123 YP_005231353.1 CDS STMMW_02771 NC_016854.1 316164 316610 D Signal peptide; signalp; query 1-24;cleavage_site_probability=0.996; 0.996; hypothetical protein 316164..316610 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759124 YP_005231354.1 CDS STMMW_02791 NC_016854.1 316864 317349 D pfam_scan;Pfam:PF05638; E()=7.7E-44;score=148.1;query 6-137;description=DUF796; putative hemolysin-coregulated protein 316864..317349 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759125 YP_005231355.1 CDS STMMW_02811 NC_016854.1 317654 318139 D hypothetical protein 317654..318139 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759126 YP_005231356.1 CDS STMMW_02831 NC_016854.1 318124 318507 D tmhmm; query 1-128; hypothetical protein 318124..318507 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759127 YP_005231357.1 CDS STMMW_02841 NC_016854.1 318650 319135 D pfam_scan;Pfam:PF05638; E()=7.3E-45;score=151.4;query 6-137;description=DUF796; putative hemolysin-coregulated protein 318650..319135 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759128 YP_005231358.1 CDS STMMW_02851 NC_016854.1 319202 319738 D Signal peptide; signalp; query 1-32;cleavage_site_probability=0.844; 0.999; putative lipoprotein 319202..319738 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759129 YP_005231359.1 CDS STMMW_02861 NC_016854.1 319742 321085 D pfam_scan;Pfam:PF05936; E()=1.4E-144;score=481.4;query 20-445;description=DUF876; putative type VI secretion protein 319742..321085 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759130 YP_005231360.1 CDS STMMW_02871 NC_016854.1 321082 322386 D pfam_scan;Pfam:PF00691; E()=3.2E-17;score=62.2;query328-426;description=OmpA; pfam_scan;Pfam:PF09850; E()=5.7E-65;score=218.3;query 62-266;description=DUF2077; tmhmm; query 1-435; putative type VI system protein 321082..322386 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759131 YP_005231361.1 CDS STMMW_02881 NC_016854.1 322391 323164 D tmhmm; query 1-258; putative inner membrane protein 322391..323164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759132 YP_005231362.1 CDS STMMW_02891 NC_016854.1 323355 323798 D Signal peptide; signalp; query 1-19;cleavage_site_probability=0.997; 0.997; putative shiga-like toxin A subunit 323355..323798 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759133 YP_005231363.1 CDS STMMW_02901 NC_016854.1 323832 327701 D pfam_scan;Pfam:PF06744; E()=1.6E-32;score=111.4;query 1024-1146;description=DUF1215; pfam_scan;Pfam:PF06761; E()=6.6E-85;score=284.5;query 588-916;description=IcmF-related; tmhmm; query 1-1290; type VI system protein 323832..327701 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759134 YP_005231364.1 CDS STMMW_02911 NC_016854.1 327701 328489 D pfam_scan;Pfam:PF09867; E()=1.0E-8;score=34.5;query 83-172;description=DUF2094; hypothetical protein 327701..328489 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759135 YP_005231365.1 CDS STMMW_02921 NC_016854.1 328486 328902 D pfam_scan;Pfam:PF09961; E()=5.1E-45;score=151.9;query 8-138;description=DUF2195; tmhmm; query 1-139; hypothetical protein 328486..328902 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759136 YP_005231366.1 CDS STMMW_02931 NC_016854.1 328926 329447 D pathogenicity island protein 328926..329447 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759137 YP_005231367.1 CDS STMMW_02941 NC_016854.1 329844 332033 D pfam_scan;Pfam:PF05954; E()=1.4E-4;score=20.6;query 206-291;description=Phage_GPD; pfam_scan;Pfam:PF04717; E()=2.8E-21;score=74.8;query467- 559;description=Phage_base_V; putative type VI system protein 329844..332033 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759138 YP_005231368.1 CDS STMMW_02951 NC_016854.1 332057 332503 D pfam_scan;Pfam:PF08786; E()=3.7E-41;score=139.4;query 9-142;description=DUF1795; hypothetical protein 332057..332503 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759139 YP_005231369.1 CDS STMMW_02961 NC_016854.1 332522 336616 D pfam_scan;Pfam:PF03527; E()=2.6E-8;score=32.6;query 1145-1177;description=RHS; pfam_scan;Pfam:PF05593; E()=1.1E-6;score=28.0;query 518-555;description=RHS_repeat; pfam_scan;Pfam:PF05488; E()=1.5E-4;score=20.9;query 78-102;description=PAAR_motif; putative Rhs family protein 332522..336616 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759140 YP_005231370.1 CDS STMMW_02971 NC_016854.1 336610 336873 D hypothetical protein 336610..336873 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759141 YP_005231371.1 CDS STMMW_02991 NC_016854.1 337800 338246 D cytoplasmic protein 337800..338246 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759143 YP_005231372.1 CDS STMMW_03011 NC_016854.1 338430 338561 D hypothetical protein 338430..338561 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759144 YP_005231373.1 CDS STMMW_03041 NC_016854.1 339299 339574 R pfam_scan;Pfam:PF08845; E()=1.2E-11;score=43.5;query15-57;description=DUF1813; hypothetical protein complement(339299..339574) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759146 YP_005231374.1 CDS STMMW_03051 NC_016854.1 340015 340323 D pathogenicity island protein 340015..340323 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759147 YP_005231375.1 CDS STMMW_03071 NC_016854.1 340726 340923 D pfam_scan;Pfam:PF01527; E()=1.8E-8;score=34.1;query 2-52;description=Transposase_8; putative transposase 340726..340923 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759149 YP_005231376.1 CDS STMMW_03091 NC_016854.1 342180 342692 D pfam_scan;Pfam:PF09460; E()=6.2E-70;score=233.1;query 27-170;description=Saf-Nte_pilin; lipoprotein 342180..342692 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759151 YP_005231377.1 CDS STMMW_03101 NC_016854.1 342800 343513 D pfam_scan;Pfam:PF00345; E()=2.0E-35;score=121.1;query 29-152;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=6.7E-21;score=73.7;query158- 230;description=Pili_assembly_C; atypical fimbria chaperone 342800..343513 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759152 YP_005231378.1 CDS STMMW_03111 NC_016854.1 343537 346047 D pfam_scan;Pfam:PF00577; E()=3.0E-266;score=884.6;query 24-820;description=Usher; atypical fimbria outer membrane usher 343537..346047 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759153 YP_005231379.1 CDS STMMW_03121 NC_016854.1 346069 346539 D pfam_scan;Pfam:PF05775; E()=4.9E-47;score=159.0;query 10-149;description=AfaD; tmhmm; query 1-157; putative salmonella atypical fimbrial structural subunit; fimbrial structural subunit 346069..346539 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759154 YP_005231380.1 CDS STMMW_03131 NC_016854.1 346945 347766 D pfam_scan;Pfam:PF01522; E()=1.9E-23;score=82.0;query58- 214;description=Polysacc_deac_1; hypothetical protein 346945..347766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759155 YP_005231381.1 CDS STMMW_03132 NC_016854.1 347891 348106 D pfam_scan;Pfam:PF06069; E()=9.6E-18;score=63.6;query2-57;description=PerC; hypothetical protein 347891..348106 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759156 YP_005231382.1 CDS STMMW_03133 NC_016854.1 348247 348378 D putative transposase 348247..348378 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759157 YP_005231383.1 CDS STMMW_03151 NC_016854.1 348581 349528 D pfam_scan;Pfam:PF00126; E()=8.5E-16;score=57.2;query11-69;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.0E-24;score=85.5;query97- 302;description=LysR_substrate; LysR family transcriptional regulator 348581..349528 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759158 YP_005231384.1 CDS STMMW_03161 NC_016854.1 349645 349860 D hypothetical protein 349645..349860 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759159 YP_005231385.1 CDS STMMW_03171 NC_016854.1 349864 350583 R pfam_scan;Pfam:PF02462; E()=5.2E-10;score=39.4;query113-209;description=Opacity; outer membrane adhesin complement(349864..350583) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759160 YP_005231386.1 CDS STMMW_03181 NC_016854.1 350914 351321 R Signal peptide; signalp; query 1-24;cleavage_site_probability=0.733; 1.000; secreted protein complement(350914..351321) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759161 YP_005231387.1 CDS STMMW_03191 NC_016854.1 351692 352459 R pfam_scan;Pfam:PF00795; E()=4.7E-17;score=61.5;query6- 152;description=CN_hydrolase; hydrolase complement(351692..352459) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759162 YP_005231388.1 CDS STMMW_03201 NC_016854.1 352568 355012 R pfam_scan;Pfam:PF00441; E()=1.1E-13;score=51.2;query360-504;description=Acyl- CoA_dh_1; pfam_scan;Pfam:PF02771; E()=3.1E-15;score=56.0;query147-232;description=Acyl- CoA_dh_N; pfam_scan;Pfam:PF09317; E()=1.9E-119;score=397.9;query 514-792;description=DUF1974; tmhmm; query 1-815; acyl-CoA dehydrogenase complement(352568..355012) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759163 YP_005231389.1 CDS STMMW_03211 NC_016854.1 355252 355830 D pfam_scan;Pfam:PF01380; E()=1.6E-7;score=30.8;query 94-162;description=SIS; phosphoheptose isomerase 355252..355830 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759164 YP_005231390.1 CDS STMMW_03221 NC_016854.1 356043 356810 D pfam_scan;Pfam:PF00310; E()=7.7E-9;score=34.6;query 65-213;description=GATase_2; hypothetical protein 356043..356810 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759165 YP_005231391.1 CDS STMMW_03231 NC_016854.1 356781 357521 R pfam_scan;Pfam:PF03734; E()=1.8E-6;score=27.8;query 44-160;description=YkuD; hypothetical protein complement(356781..357521) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759166 YP_005231392.1 CDS STMMW_03241 NC_016854.1 357771 358826 D pfam_scan;Pfam:PF11798; E()=1.9E-10;score=39.8;query165-197;description=IMS_HHH; pfam_scan;Pfam:PF00817; E()=4.3E-53;score=178.7;query 7-154;description=IMS; pfam_scan;Pfam:PF11799; E()=4.1E-13;score=48.9;query210-333;description=IMS_C; DNA polymerase IV 357771..358826 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759167 YP_005231393.1 CDS STMMW_03261 NC_016854.1 360174 360788 D pfam_scan;Pfam:PF00472; E()=1.5E-24;score=85.7;query101-194;description=RF-1; putative peptide chain release factor 360174..360788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759169 YP_005231394.1 CDS STMMW_03271 NC_016854.1 360944 362401 R pfam_scan;Pfam:PF07687; E()=1.5E-10;score=40.2;query207-294;description=M20_dimer; pfam_scan;Pfam:PF01546; E()=4.7E-15;score=55.3;query73- 479;description=Peptidase_M20; aminoacyl-histidine dipeptidase precursor complement(360944..362401) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759170 YP_005231395.1 CDS STMMW_03281 NC_016854.1 362650 363108 D pfam_scan;Pfam:PF00156; E()=1.8E-12;score=46.8;query4- 105;description=Pribosyltran; xanthine-guanine phosphoribosyltransferase 362650..363108 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759171 YP_005231396.1 CDS STMMW_03291 NC_016854.1 363197 364441 D pfam_scan;Pfam:PF06500; E()=6.1E-215;score=713.1;query 1-414;description=DUF1100; hypothetical protein 363197..364441 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759172 YP_005231397.1 CDS STMMW_03301 NC_016854.1 364499 364900 D pfam_scan;Pfam:PF07417; E()=3.1E-54;score=181.5;query 3-123;description=Crl; curlin genes transcriptional activator 364499..364900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759173 YP_005231398.1 CDS STMMW_03311 NC_016854.1 364951 366003 R pfam_scan;Pfam:PF00267; E()=3.8E-148;score=492.6;query 26-350;description=Porin_1; outer membrane pore protein E complement(364951..366003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759174 YP_005231399.1 CDS STMMW_03321 NC_016854.1 366286 367389 D pfam_scan;Pfam:PF01472; E()=1.6E-21;score=75.5;query276-350;description=PUA; pfam_scan;Pfam:PF00696; E()=9.7E-46;score=156.0;query 6-235;description=AA_kinase; glutamate 5-kinase 366286..367389 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759175 YP_005231400.1 CDS STMMW_03331 NC_016854.1 367401 368651 D pfam_scan;Pfam:PF00171; E()=7.4E-16;score=57.0;query8-283;description=Aldedh; gamma-glutamyl phosphate reductase 367401..368651 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759176 YP_005231401.1 CDS STMMW_03341 NC_016854.1 368857 369852 R pfam_scan;Pfam:PF00589; E()=2.3E-43;score=147.7;query 134-302;description=Phage_integrase; integrase complement(368857..369852) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759177 YP_005231402.1 CDS STMMW_03351 NC_016854.1 369897 370247 R excisionase complement(369897..370247) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759178 YP_005231403.1 CDS STMMW_03361 NC_016854.1 370258 370851 R prophage protein complement(370258..370851) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759179 YP_005231404.1 CDS STMMW_03371 NC_016854.1 370923 371207 R hypothetical protein complement(370923..371207) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759180 YP_005231405.1 CDS STMMW_03381 NC_016854.1 371200 372165 R pfam_scan;Pfam:PF04447; E()=2.3E-39;score=133.1;query 99-205;description=DUF550; prophage protein complement(371200..372165) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759181 YP_005231406.1 CDS STMMW_03391 NC_016854.1 372176 372931 R prophage protein complement(372176..372931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759182 YP_005231407.1 CDS STMMW_03411 NC_016854.1 372931 373575 R prophage protein complement(372931..373575) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759183 YP_005231408.1 CDS STMMW_03421 NC_016854.1 373572 373982 R Note N-terminal similarity to Eae; prophage protein complement(373572..373982) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759184 YP_005231409.1 CDS STMMW_03422 NC_016854.1 373979 374149 R pfam_scan;Pfam:PF10930; E()=2.7E-30;score=103.2;query 1-56;description=DUF2737; prophage protein complement(373979..374149) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759185 YP_005231410.1 CDS STMMW_03431 NC_016854.1 374160 374453 R pfam_scan;Pfam:PF11043; E()=1.6E-59;score=197.6;query 1-97;description=DUF2856; anti-RecBCD complement(374160..374453) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759186 YP_005231411.1 CDS STMMW_03441 NC_016854.1 374500 374784 R pfam_scan;Pfam:PF08281; E()=1.2E-5;score=24.8;query 67-94;description=Sigma70_r4_2; anti-RecBCD complement(374500..374784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759187 YP_005231412.1 CDS STMMW_03451 NC_016854.1 374784 375491 R pfam_scan;Pfam:PF04098; E()=3.0E-19;score=68.4;query5-131;description=Rad52_Rad22; prophage protein complement(374784..375491) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759188 YP_005231413.1 CDS STMMW_03461 NC_016854.1 375488 375631 R prophage protein complement(375488..375631) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759189 YP_005231414.1 CDS STMMW_03471 NC_016854.1 375621 375809 R kil complement(375621..375809) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759190 YP_005231415.1 CDS STMMW_03481 NC_016854.1 375790 375972 R pfam_scan;Pfam:PF02061; E()=5.2E-23;score=80.0;query11-53;description=Lambda_CIII; regulatory protein complement(375790..375972) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759191 YP_005231416.1 CDS STMMW_03491 NC_016854.1 376059 376205 R tmhmm; query 1-49; prophage protein complement(376059..376205) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759192 YP_005231417.1 CDS STMMW_03501 NC_016854.1 376266 376565 R prophage protein complement(376266..376565) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759193 YP_005231418.1 CDS STMMW_03511 NC_016854.1 376605 376805 R pfam_scan;Pfam:PF11058; E()=1.6E-44;score=148.4;query 1-66;description=Ral; antirestriction protein complement(376605..376805) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759194 YP_005231419.1 CDS STMMW_03521 NC_016854.1 376884 377216 R prophage protein complement(376884..377216) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759195 YP_005231420.1 CDS STMMW_03522 NC_016854.1 377619 377789 D pfam_scan;Pfam:PF10965; E()=1.3E-26;score=91.4;query1-56;description=DUF2767; prophage protein 377619..377789 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759196 YP_005231421.1 CDS STMMW_03531 NC_016854.1 377825 378748 R prophage protein complement(377825..378748) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759197 YP_005231422.1 CDS STMMW_03541 NC_016854.1 378837 379562 R pfam_scan;Pfam:PF00717; E()=7.2E-14;score=50.8;query150- 215;description=Peptidase_S24; pfam_scan;Pfam:PF01381; E()=2.5E-7;score=30.0;query 23-75;description=HTH_3; repressor protein cI complement(378837..379562) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759198 YP_005231423.1 CDS STMMW_03551 NC_016854.1 379637 379852 D antirepressor protein 379637..379852 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759199 YP_005231424.1 CDS STMMW_03561 NC_016854.1 379963 380244 D pfam_scan;Pfam:PF05269; E()=1.6E-29;score=101.5;query 4-92;description=Phage_CII; transcriptional activator 379963..380244 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759200 YP_005231425.1 CDS STMMW_03571 NC_016854.1 380418 381251 D pfam_scan;Pfam:PF04492; E()=2.0E-107;score=358.5;query 2-271;description=Phage_rep_O; replication protein 380418..381251 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759201 YP_005231426.1 CDS STMMW_03581 NC_016854.1 381248 382624 D pfam_scan;Pfam:PF00772; E()=1.2E-10;score=41.3;query3-94;description=DnaB; pfam_scan;Pfam:PF03796; E()=9.5E-62;score=207.5;query 169-371;description=DnaB_C; replication protein 381248..382624 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759202 YP_005231427.1 CDS STMMW_03582 NC_016854.1 382621 382890 D prophage protein 382621..382890 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759203 YP_005231428.1 CDS STMMW_03601 NC_016854.1 382962 383234 D tmhmm; query 1-91; prophage protein 382962..383234 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759204 YP_005231429.1 CDS STMMW_03602 NC_016854.1 383244 383453 D prophage protein 383244..383453 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759205 YP_005231430.1 CDS STMMW_03611 NC_016854.1 383450 383758 D prophage protein 383450..383758 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759206 YP_005231431.1 CDS STMMW_03621 NC_016854.1 383755 383949 D prophage protein 383755..383949 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759207 YP_005231432.1 CDS STMMW_03631 NC_016854.1 383906 384352 D note strong similarity to ninB but differing 5 prime sequence; pfam_scan;Pfam:PF05772; E()=1.2E-51;score=173.3;query 7-132;description=NinB; prophage protein 383906..384352 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759208 YP_005231433.1 CDS STMMW_03641 NC_016854.1 384489 384671 D note similarity to lambda ninE; pfam_scan;Pfam:PF05322; E()=1.1E-35;score=120.5;query 1-60;description=NinE; prophage protein 384489..384671 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759209 YP_005231434.1 CDS STMMW_03651 NC_016854.1 384668 384838 D note similarity to lambda ninF; pfam_scan;Pfam:PF05810; E()=1.4E-27;score=94.4;query2-55;description=NinF; prophage protein 384668..384838 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759210 YP_005231435.1 CDS STMMW_03661 NC_016854.1 384831 385442 D note similarity to lambda ninG; pfam_scan;Pfam:PF05766; E()=2.8E-75;score=251.3;query 1-197;description=NinG; prophage protein 384831..385442 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759211 YP_005231436.1 CDS STMMW_03671 NC_016854.1 385439 385663 D note similarity to lambda ninY; prophage protein 385439..385663 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759212 YP_005231437.1 CDS STMMW_03681 NC_016854.1 385660 385863 D note similarity to lambda ninH; pfam_scan;Pfam:PF06322; E()=5.8E-37;score=124.4;query 1-64;description=Phage_NinH; prophage protein 385660..385863 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759213 YP_005231438.1 CDS STMMW_03691 NC_016854.1 386020 386538 D pfam_scan;Pfam:PF06530; E()=8.7E-43;score=145.0;query 4-136;description=Phage_antitermQ; antiterminator protein 386020..386538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759214 YP_005231439.1 CDS STMMW_03711 NC_016854.1 387003 387206 D tmhmm; query 1-68; lysozyme 387003..387206 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759215 YP_005231440.1 CDS STMMW_03721 NC_016854.1 387178 387681 D pfam_scan;Pfam:PF00959; E()=3.0E-37;score=126.5;query 50-156;description=Phage_lysozyme; tmhmm; query 1-168; lysozyme 387178..387681 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759216 YP_005231441.1 CDS STMMW_03731 NC_016854.1 387734 388207 D pfam_scan;Pfam:PF03245; E()=1.0E-59;score=200.4;query 13-156;description=Phage_lysis; tmhmm; query 1-158; lysozyme 387734..388207 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759217 YP_005231442.1 CDS STMMW_03741 NC_016854.1 388357 388962 D pfam_scan;Pfam:PF10549; E()=1.3E-22;score=78.4;query143-199;description=ORF11CD3; pfam_scan;Pfam:PF09669; E()=1.9E-22;score=79.0;query47-138;description=Phage_pRha; prophage protein 388357..388962 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759218 YP_005231443.1 CDS STMMW_03751 NC_016854.1 389224 389538 R prophage protein complement(389224..389538) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759219 YP_005231444.1 CDS STMMW_03761 NC_016854.1 389792 390034 D pfam_scan;Pfam:PF10834; E()=1.6E-46;score=155.5;query 1-80;description=DUF2560; prophage protein 389792..390034 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759220 YP_005231445.1 CDS STMMW_03771 NC_016854.1 390239 390727 D terminase small subunit 390239..390727 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759221 YP_005231446.1 CDS STMMW_03781 NC_016854.1 390705 392204 D pfam_scan;Pfam:PF03237; E()=8.7E-72;score=241.7;query 57-470;description=Terminase_6; terminase large subunit 390705..392204 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759222 YP_005231447.1 CDS STMMW_03791 NC_016854.1 392204 394381 D portal protein 392204..394381 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759223 YP_005231448.1 CDS STMMW_03801 NC_016854.1 394395 395306 D pfam_scan;Pfam:PF09306; E()=2.5E-201;score=667.0;query 1-303;description=Phage-scaffold; scaffolding protein 394395..395306 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759224 YP_005231449.1 CDS STMMW_03811 NC_016854.1 395306 396598 D pfam_scan;Pfam:PF11651; E()=2.2E-126;score=421.6;query 1-427;description=P22_CoatProtein; coat protein 395306..396598 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759225 YP_005231450.1 CDS STMMW_03821 NC_016854.1 396639 397199 D prophage protein 396639..397199 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759226 YP_005231451.1 CDS STMMW_03831 NC_016854.1 397183 397683 D pfam_scan;Pfam:PF11650; E()=3.7E-67;score=224.6;query 1-164;description=P22_Tail-4; DNA stabilization protein 397183..397683 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759227 YP_005231452.1 CDS STMMW_03841 NC_016854.1 397676 399061 D pfam_scan;Pfam:PF11134; E()=1.5E-254;score=844.3;query 1-461;description=Phage_stabilise; packaged DNA stabilization protein 397676..399061 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759228 YP_005231453.1 CDS STMMW_03851 NC_016854.1 399065 399766 D packaged DNA stabilization protein 399065..399766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759229 YP_005231454.1 CDS STMMW_03861 NC_016854.1 399766 400221 D pfam_scan;Pfam:PF11039; E()=2.5E-107;score=354.5;query 1-151;description=DUF2824; head assembly protein 399766..400221 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759230 YP_005231455.1 CDS STMMW_03871 NC_016854.1 400224 400913 D DNA transfer protein 400224..400913 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759231 YP_005231456.1 CDS STMMW_03881 NC_016854.1 400923 402293 D DNA transfer protein 400923..402293 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759232 YP_005231457.1 CDS STMMW_03891 NC_016854.1 402293 404260 D DNA tranfer protein 402293..404260 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759233 YP_005231458.1 CDS STMMW_03901 NC_016854.1 404416 406401 D pfam_scan;Pfam:PF09251; E()=1.9E-257;score=854.7;query 115-659;description=PhageP22-tail; pfam_scan;Pfam:PF09008; E()=3.6E-61;score=203.7;query 1-114;description=Head_binding; tail spike protein 404416..406401 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759234 YP_005231459.1 CDS STMMW_03911 NC_016854.1 406441 408363 R Note gtrA downstream; pfam_scan;Pfam:PF01757; E()=1.5E-33;score=115.8;query 9-330;description=Acyl_transf_3; tmhmm; query 1-641; transferase complement(406441..408363) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759235 YP_005231460.1 CDS STMMW_03921 NC_016854.1 408435 408710 R tmhmm; query 1-92; bactoprenol-linked glucose transferase complement(408435..408710) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759236 YP_005231461.1 CDS STMMW_03931 NC_016854.1 408984 409229 R prophage protein complement(408984..409229) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759237 YP_005231462.1 CDS STMMW_03941 NC_016854.1 409693 410493 R pfam_scan;Pfam:PF00665; E()=2.0E-38;score=131.3;query 124-265;description=rve; putative IS3 transposase complement(409693..410493) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759238 YP_005231463.1 CDS STMMW_03971 NC_016854.1 411235 411558 D pfam_scan;Pfam:PF08986; E()=6.8E-49;score=164.2;query 1-107;description=DUF1889; hypothetical protein 411235..411558 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759240 YP_005231464.1 CDS STMMW_03981 NC_016854.1 411899 413137 D pfam_scan;Pfam:PF07690; E()=6.0E-38;score=130.7;query 26-358;description=MFS_1; tmhmm; query 1-413; putative permease/MSF transporter 411899..413137 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759241 YP_005231465.1 CDS STMMW_03991 NC_016854.1 413269 414690 D pfam_scan;Pfam:PF00330; E()=3.3E-148;score=493.7;query 5-460;description=Aconitase; 3-isopropylmalate dehydratase large subunit 2 413269..414690 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759242 YP_005231466.1 CDS STMMW_04001 NC_016854.1 414692 415318 D pfam_scan;Pfam:PF00694; E()=3.3E-27;score=94.6;query1-123;description=Aconitase_C; 3-isopropylmalate dehydratase small subunit 2 414692..415318 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759243 YP_005231467.1 CDS STMMW_04011 NC_016854.1 415333 416211 D pfam_scan;Pfam:PF01557; E()=1.2E-58;score=197.7;query 74-276;description=FAA_hydrolase; putative fumarylacetoacetate (faa) hydrolase 415333..416211 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759244 YP_005231468.1 CDS STMMW_04021 NC_016854.1 416211 417125 D pfam_scan;Pfam:PF00561; E()=1.8E-22;score=79.6;query64- 289;description=Abhydrolase_1; putative hydrolase or acyltransferase 416211..417125 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759245 YP_005231469.1 CDS STMMW_04031 NC_016854.1 417159 418124 D pfam_scan;Pfam:PF00126; E()=1.2E-15;score=56.8;query21-79;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.3E-35;score=122.0;query 104-308;description=LysR_substrate; putative LysR family transcriptional regulator 417159..418124 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759246 YP_005231470.1 CDS STMMW_04041 NC_016854.1 418069 418341 R hypothetical protein complement(418069..418341) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759247 YP_005231471.1 CDS STMMW_04051 NC_016854.1 419032 419430 D Signal peptide; signalp; query 1-26;cleavage_site_probability=0.628; 0.998; secreted protein 419032..419430 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759248 YP_005231472.1 CDS STMMW_04061 NC_016854.1 419477 420235 R pfam_scan;Pfam:PF00345; E()=1.3E-36;score=125.0;query 30-155;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=6.0E-14;score=51.5;query162- 236;description=Pili_assembly_C; fimbrial chaperone protein complement(419477..420235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759249 YP_005231473.1 CDS STMMW_04071 NC_016854.1 420201 421526 R Signal peptide; signalp; query 1-19;cleavage_site_probability=0.750; 0.933; putative fimbrial protein complement(420201..421526) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759250 YP_005231474.1 CDS STMMW_04081 NC_016854.1 421531 424098 R pfam_scan;Pfam:PF00577; E()=7.9E-208;score=691.4;query 29-837;description=Usher; outer membrane fimbrial usher protein complement(421531..424098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759251 YP_005231475.1 CDS STMMW_04091 NC_016854.1 424082 424843 R pfam_scan;Pfam:PF00345; E()=6.1E-44;score=148.6;query 29-154;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=6.9E-16;score=57.7;query161- 246;description=Pili_assembly_C; tmhmm; query 1-254; fimbrial chaperone protein complement(424082..424843) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759252 YP_005231476.1 CDS STMMW_04101 NC_016854.1 424905 425441 R pfam_scan;Pfam:PF00419; E()=1.6E-26;score=93.3;query27-178;description=Fimbrial; fimbrial protein complement(424905..425441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759253 YP_005231477.1 CDS STMMW_04111 NC_016854.1 426075 426839 D tmhmm; query 1-255; transmembrane regulator 426075..426839 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759254 YP_005231478.1 CDS STMMW_04121 NC_016854.1 426812 427312 D tmhmm; query 1-167; hypothetical protein 426812..427312 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759255 YP_005231479.1 CDS STMMW_04131 NC_016854.1 427612 429186 D pfam_scan;Pfam:PF00563; E()=5.1E-67;score=225.4;query 259-490;description=EAL; tmhmm; query 1-525; putative rtn protein 427612..429186 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759256 YP_005231480.1 CDS STMMW_04141 NC_016854.1 429286 430029 D transmembrane regulator 429286..430029 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759257 YP_005231481.1 CDS STMMW_04151 NC_016854.1 430002 430490 D tmhmm; query 1-163; hypothetical protein 430002..430490 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759258 YP_005231482.1 CDS STMMW_04161 NC_016854.1 430892 431416 D pfam_scan;Pfam:PF06316; E()=4.9E-16;score=58.5;query17-125;description=Ail_Lom; outer membrane protein 430892..431416 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759259 YP_005231483.1 CDS STMMW_04171 NC_016854.1 431560 432201 D pfam_scan;Pfam:PF00196; E()=4.1E-5;score=22.8;query 136-181;description=GerE; transcriptional regulator 431560..432201 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759260 YP_005231484.1 CDS STMMW_04181 NC_016854.1 432212 432436 D secreted protein 432212..432436 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759261 YP_005231485.1 CDS STMMW_04191 NC_016854.1 432494 432853 D Signal peptide; signalp; query 1-21;cleavage_site_probability=0.408; 1.000; lipoprotein 432494..432853 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759262 YP_005231486.1 CDS STMMW_04201 NC_016854.1 432923 434434 R pfam_scan;Pfam:PF02321; E()=5.8E-26;score=91.0;query88-278;description=OEP; putative outer membrane efflux lipoprotein complement(432923..434434) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759263 YP_005231487.1 CDS STMMW_04211 NC_016854.1 434397 437564 R pfam_scan;Pfam:PF00873; E()=0.0;score=1195.3;query 4-1038;description=ACR_tran; tmhmm; query 1-1056; putative cation efflux protein complement(434397..437564) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759264 YP_005231488.1 CDS STMMW_04221 NC_016854.1 437561 438787 R pfam_scan;Pfam:PF00529; E()=1.2E-40;score=139.6;query 72-364;description=HlyD; tmhmm; query 1-409; putative cation efflux pump complement(437561..438787) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759265 YP_005231489.1 CDS STMMW_04231 NC_016854.1 439064 441352 D pfam_scan;Pfam:PF00403; E()=3.6E-19;score=68.0;query13-70;description=HMA; pfam_scan;Pfam:PF00702; E()=2.1E-36;score=125.6;query 435-660;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=1.0E-68;score=230.7;query 208-429;description=E1-E2_ATPase; tmhmm; query 1-763; putative cation transport atpase 439064..441352 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759266 YP_005231490.1 CDS STMMW_04241 NC_016854.1 441364 441828 D pfam_scan;Pfam:PF09278; E()=1.3E-22;score=79.0;query44-108;description=MerR-DNA- bind; pfam_scan;Pfam:PF00376; E()=3.5E-15;score=54.8;query2-39;description=MerR; Putative transcriptional regulatory protein 441364..441828 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759267 YP_005231491.1 CDS STMMW_04251 NC_016854.1 441906 442100 D pfam_scan;Pfam:PF00403; E()=2.5E-15;score=55.8;query3-60;description=HMA; putative metal-binding transport protein 441906..442100 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759268 YP_005231492.1 CDS STMMW_04261 NC_016854.1 442393 443646 D pfam_scan;Pfam:PF07690; E()=2.7E-42;score=145.0;query 23-351;description=MFS_1; tmhmm; query 1-418; putative metabolite transport protein 442393..443646 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759269 YP_005231493.1 CDS STMMW_04271 NC_016854.1 443835 445793 D pfam_scan;Pfam:PF01555; E()=9.2E-49;score=165.3;query 129-449;description=N6_N4_Mtase; type III restriction-modification system enzyme (StyLTI) modification methylase 443835..445793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759270 YP_005231494.1 CDS STMMW_04281 NC_016854.1 445803 448775 D pfam_scan;Pfam:PF04851; E()=4.2E-24;score=84.8;query9-229;description=ResIII; pfam_scan;Pfam:PF08774; E()=1.1E-5;score=24.8;query 895-970;description=VRR_NUC; type III restriction-modification system enzyme (StyLTI) 445803..448775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759271 YP_005231495.1 CDS STMMW_04291 NC_016854.1 449052 449153 D hypothetical protein 449052..449153 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759272 YP_005231496.1 CDS STMMW_04301 NC_016854.1 449270 450673 D pfam_scan;Pfam:PF01654; E()=2.2E-181;score=602.7;query 8-437;description=Bac_Ubq_Cox; tmhmm; query 1-468; terminal oxidase subunit I 449270..450673 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759273 YP_005231497.1 CDS STMMW_04311 NC_016854.1 450670 451680 D pfam_scan;Pfam:PF02322; E()=2.3E-118;score=394.9;query 4-326;description=Cyto_ox_2; tmhmm; query 1-337; terminal oxidase subunit II 450670..451680 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759274 YP_005231498.1 CDS STMMW_04321 NC_016854.1 451697 451921 D hypothetical protein 451697..451921 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759275 YP_005231499.1 CDS STMMW_04331 NC_016854.1 452017 453021 D AraC family transcriptional regulator 452017..453021 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759276 YP_005231500.1 CDS STMMW_04341 NC_016854.1 453167 455275 D pfam_scan;Pfam:PF07715; E()=7.3E-27;score=93.3;query57-162;description=Plug; pfam_scan;Pfam:PF00593; E()=3.8E-46;score=157.8;query 467-702;description=TonB_dep_Rec; ferrioxamine B receptor 453167..455275 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759277 YP_005231501.1 CDS STMMW_04351 NC_016854.1 455316 455948 R pfam_scan;Pfam:PF01810; E()=1.2E-55;score=187.5;query 17-206;description=LysE; tmhmm; query 1-211; RhtC-like transporter complement(455316..455948) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759278 YP_005231502.1 CDS STMMW_04361 NC_016854.1 456180 456455 D pfam_scan;Pfam:PF07338; E()=6.2E-17;score=61.4;query34-89;description=DUF1471; secreted protein 456180..456455 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759279 YP_005231503.1 CDS STMMW_04371 NC_016854.1 456591 458216 R pfam_scan;Pfam:PF00158; E()=1.7E-65;score=219.5;query 222-396;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=2.5E-11;score=42.5;query497-532;description=HTH_8; pfam_scan;Pfam:PF06506; E()=1.2E-58;score=197.1;query 32-202;description=PrpR_N; propionate catabolism operon regulatory protein complement(456591..458216) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759280 YP_005231504.1 CDS STMMW_04381 NC_016854.1 458481 459368 D pfam_scan;Pfam:PF00463; E()=8.5E-15;score=53.5;query80-182;description=ICL; putative carboxyvinyl-carboxyphosphonate phosphorylmutase 458481..459368 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759281 YP_005231505.1 CDS STMMW_04391 NC_016854.1 459491 460660 D pfam_scan;Pfam:PF00285; E()=4.6E-118;score=394.0;query 22-370;description=Citrate_synt; methylcitrate synthase 459491..460660 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759282 YP_005231506.1 CDS STMMW_04401 NC_016854.1 460700 462151 D pfam_scan;Pfam:PF03972; E()=2.8E-169;score=562.7;query 14-474;description=MmgE_PrpD; PrpD protein 460700..462151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759283 YP_005231507.1 CDS STMMW_04411 NC_016854.1 462192 464078 D pfam_scan;Pfam:PF00501; E()=5.4E-95;score=318.0;query 85-525;description=AMP-binding; PrpE protein 462192..464078 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759284 YP_005231508.1 CDS STMMW_04421 NC_016854.1 464182 465156 R pfam_scan;Pfam:PF00490; E()=6.3E-136;score=451.8;query 5-319;description=ALAD; delta-aminolevulinic acid dehydratase complement(464182..465156) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759285 YP_005231509.1 CDS STMMW_04431 NC_016854.1 465669 468605 D pfam_scan;Pfam:PF03797; E()=8.2E-46;score=156.0;query 715-959;description=Autotransporter; autotransporter/virulence factor 465669..468605 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759286 YP_005231510.1 CDS STMMW_04441 NC_016854.1 468691 469314 D pfam_scan;Pfam:PF00027; E()=4.2E-7;score=29.2;query 28-109;description=cNMP_binding; hypothetical protein 468691..469314 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759287 YP_005231511.1 CDS STMMW_04451 NC_016854.1 469359 470489 R pfam_scan;Pfam:PF00144; E()=2.5E-65;score=220.3;query 28-348;description=Beta-lactamase; penicillin-binding protein AmpH complement(469359..470489) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759288 YP_005231512.1 CDS STMMW_04461 NC_016854.1 470965 472083 D pfam_scan;Pfam:PF05992; E()=2.7E-164;score=545.3;query 46-359;description=SbmA_BacA; tmhmm; query 1-373; SbmA protein; ABC-transporter inner membrane protein SbmA 470965..472083 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759289 YP_005231513.1 CDS STMMW_04471 NC_016854.1 472098 473192 D pfam_scan;Pfam:PF07759; E()=1.4E-155;score=516.8;query 49-364;description=DUF1615; putative lipoprotein 472098..473192 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759290 YP_005231514.1 CDS STMMW_04481 NC_016854.1 473230 473538 R pfam_scan;Pfam:PF10954; E()=4.1E-57;score=190.3;query 1-101;description=DUF2755; tmhmm; query 1-103; hypothetical protein complement(473230..473538) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759291 YP_005231515.1 CDS STMMW_04491 NC_016854.1 473806 474021 D pfam_scan;Pfam:PF10953; E()=6.1E-42;score=140.3;query 1-65;description=DUF2754; tmhmm; query 1-72; hypothetical protein 473806..474021 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759292 YP_005231516.1 CDS STMMW_04501 NC_016854.1 474047 475141 R pfam_scan;Pfam:PF07478; E()=7.4E-86;score=286.9;query 140-348;description=Dala_Dala_lig_C; pfam_scan;Pfam:PF01820; E()=9.5E-35;score=119.1;query 5-130;description=Dala_Dala_lig_N; D-alanine--D-alanine ligase complement(474047..475141) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759293 YP_005231517.1 CDS STMMW_04511 NC_016854.1 475219 475932 D pfam_scan;Pfam:PF06904; E()=7.0E-55;score=184.8;query 64-237;description=Extensin-like_C; tmhmm; query 1-238; hypothetical protein 475219..475932 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759294 YP_005231518.1 CDS STMMW_04521 NC_016854.1 476101 477312 D pfam_scan;Pfam:PF07690; E()=2.1E-38;score=132.2;query 11-303;description=MFS_1; tmhmm; query 1-404; efflux pump 476101..477312 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759295 YP_005231519.1 CDS STMMW_04531 NC_016854.1 477603 477869 D pfam_scan;Pfam:PF10796; E()=3.1E-35;score=119.6;query 3-87;description=Anti-adapt_IraP; hypothetical protein 477603..477869 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759296 YP_005231520.1 CDS STMMW_04541 NC_016854.1 478221 478541 D pfam_scan;Pfam:PF07769; E()=9.8E-18;score=63.0;query26-59;description=PsiF_repeat; tmhmm; query 1-107; phosphate starvation-inducible protein PsiF 478221..478541 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759297 YP_005231521.1 CDS STMMW_04551 NC_016854.1 478633 479745 D pfam_scan;Pfam:PF00990; E()=4.4E-47;score=159.3;query 210-365;description=GGDEF; pfam_scan;Pfam:PF05230; E()=2.1E-31;score=107.0;query 38-128;description=MASE2; tmhmm; query 1-371; adrA protein 478633..479745 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759298 YP_005231522.1 CDS STMMW_04561 NC_016854.1 479760 480569 R pfam_scan;Pfam:PF03807; E()=2.0E-22;score=79.2;query4- 99;description=F420_oxidored; pyrroline-5-carboxylate reductase complement(479760..480569) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759299 YP_005231523.1 CDS STMMW_04571 NC_016854.1 480709 481164 D pfam_scan;Pfam:PF02639; E()=9.4E-55;score=183.4;query 17-143;description=DUF188; hypothetical protein 480709..481164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759300 YP_005231524.1 CDS STMMW_04581 NC_016854.1 481349 481894 D pfam_scan;Pfam:PF01202; E()=3.6E-49;score=166.4;query 11-168;description=SKI; shikimate kinase 481349..481894 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759301 YP_005231525.1 CDS STMMW_04591 NC_016854.1 481921 482112 D hypothetical protein 481921..482112 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759302 YP_005231526.1 CDS STMMW_04601 NC_016854.1 482363 483040 D pfam_scan;Pfam:PF07302; E()=3.1E-85;score=284.7;query 5-224;description=AroM; AroM protein 482363..483040 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759303 YP_005231527.1 CDS STMMW_04611 NC_016854.1 483111 483395 D pfam_scan;Pfam:PF06865; E()=1.4E-35;score=121.1;query 1-94;description=DUF1255; hypothetical protein 483111..483395 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759304 YP_005231528.1 CDS STMMW_04621 NC_016854.1 483433 484344 R pfam_scan;Pfam:PF04381; E()=3.0E-135;score=449.3;query 2-301;description=RdgC; recombination associated protein complement(483433..484344) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759305 YP_005231529.1 CDS STMMW_04631 NC_016854.1 484470 485378 D pfam_scan;Pfam:PF00480; E()=1.4E-53;score=181.0;query 4-193;description=ROK; ROK family protein 484470..485378 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759306 YP_005231530.1 CDS STMMW_04641 NC_016854.1 485400 486572 R pfam_scan;Pfam:PF07690; E()=4.1E-41;score=141.1;query 8-330;description=MFS_1; tmhmm; query 1-391; transmembrane efflux protein complement(485400..486572) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759307 YP_005231531.1 CDS STMMW_04651 NC_016854.1 486745 489885 R exonuclease SbcC complement(486745..489885) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759308 YP_005231532.1 CDS STMMW_04661 NC_016854.1 489882 491084 R pfam_scan;Pfam:PF00149; E()=4.8E-21;score=74.2;query1-225;description=Metallophos; exonuclease SbcD complement(489882..491084) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759309 YP_005231533.1 CDS STMMW_04671 NC_016854.1 491298 491987 D pfam_scan;Pfam:PF00486; E()=1.3E-28;score=97.7;query151- 225;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=7.2E-31;score=106.2;query 5-117;description=Response_reg; phosphate regulon transcriptional regulatory protein PhoB 491298..491987 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759310 YP_005231534.1 CDS STMMW_04681 NC_016854.1 492057 493352 D pfam_scan;Pfam:PF00989; E()=2.7E-11;score=43.2;query99-194;description=PAS; pfam_scan;Pfam:PF02518; E()=1.3E-33;score=114.7;query 313-423;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.4E-20;score=72.5;query203-268;description=HisKA; tmhmm; query 1-432; phosphate regulon sensor protein PhoR 492057..493352 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759311 YP_005231535.1 CDS STMMW_04691 NC_016854.1 493761 495080 D pfam_scan;Pfam:PF05525; E()=3.3E-158;score=526.2;query 7-429;description=Branch_AA_trans; tmhmm; query 1-440; branched chain amino acid transport system II carrier protein 493761..495080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759312 YP_005231536.1 CDS STMMW_04701 NC_016854.1 495155 496525 D pfam_scan;Pfam:PF00324; E()=1.8E-122;score=408.6;query 15-452;description=AA_permease; tmhmm; query 1-457; proline-specific permease ProY 495155..496525 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759313 YP_005231537.1 CDS STMMW_04711 NC_016854.1 496687 498504 D pfam_scan;Pfam:PF00128; E()=5.4E-79;score=265.1;query 127-520;description=Alpha-amylase; maltodextrin glucosidase 496687..498504 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759314 YP_005231538.1 CDS STMMW_04721 NC_016854.1 498576 499178 R pfam_scan;Pfam:PF10417; E()=4.0E-12;score=45.1;query160-193;description=1- cysPrx_C; pfam_scan;Pfam:PF00578; E()=1.7E-37;score=127.6;query 4-139;description=AhpC-TSA; peroxidase complement(498576..499178) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759315 YP_005231539.1 CDS STMMW_04731 NC_016854.1 499388 499969 R pfam_scan;Pfam:PF04336; E()=3.9E-32;score=110.1;query 81-186;description=DUF479; hypothetical protein complement(499388..499969) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759316 YP_005231540.1 CDS STMMW_04741 NC_016854.1 500063 501127 D pfam_scan;Pfam:PF02547; E()=2.0E-85;score=285.5;query 1-217;description=Queuosine_synth; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 500063..501127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759317 YP_005231541.1 CDS STMMW_04751 NC_016854.1 501324 502451 D pfam_scan;Pfam:PF01702; E()=8.2E-111;score=368.5;query 125-362;description=TGT; tRNA-guanine transglycosylase; queuine tRNA-ribosyltransferase 501324..502451 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759318 YP_005231542.1 CDS STMMW_04761 NC_016854.1 502474 502806 D pfam_scan;Pfam:PF02699; E()=6.6E-28;score=95.7;query20-102;description=YajC; tmhmm; query 1-111; hypothetical protein 502474..502806 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759319 YP_005231543.1 CDS STMMW_04771 NC_016854.1 502834 504681 D pfam_scan;Pfam:PF02355; E()=2.3E-15;score=56.2;query433-603;description=SecD_SecF; pfam_scan;Pfam:PF07549; E()=1.2E-6;score=27.1;query 113-141;description=Sec_GG; tmhmm; query 1-616; protein-export membrane protein SecD 502834..504681 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759320 YP_005231544.1 CDS STMMW_04781 NC_016854.1 504692 505663 D pfam_scan;Pfam:PF02355; E()=2.3E-69;score=232.3;query 118-301;description=SecD_SecF; pfam_scan;Pfam:PF07549; E()=2.6E-9;score=35.5;query 41-66;description=Sec_GG; tmhmm; query 1-324; protein-export membrane protein SecF 504692..505663 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759321 YP_005231545.1 CDS STMMW_04791 NC_016854.1 505811 506176 D pfam_scan;Pfam:PF00903; E()=6.0E-10;score=39.1;query5-115;description=Glyoxalase; hypothetical protein 505811..506176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759322 YP_005231546.1 CDS STMMW_04801 NC_016854.1 506202 506894 D pfam_scan;Pfam:PF08279; E()=2.0E-16;score=58.9;query7-60;description=HTH_11; putative deoR family transcriptional regulator 506202..506894 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759323 YP_005231547.1 CDS STMMW_04811 NC_016854.1 507064 507411 D pfam_scan;Pfam:PF01844; E()=2.3E-7;score=29.8;query 26-75;description=HNH; hypothetical protein 507064..507411 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759324 YP_005231548.1 CDS STMMW_04821 NC_016854.1 507659 507985 R hypothetical protein complement(507659..507985) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759325 YP_005231549.1 CDS STMMW_04831 NC_016854.1 508040 508903 R pfam_scan;Pfam:PF03502; E()=2.0E-76;score=256.2;query 9-287;description=Channel_Tsx; nucleoside-specific channel-forming protein tsx complement(508040..508903) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759326 YP_005231550.1 CDS STMMW_04841 NC_016854.1 509203 509742 R pfam_scan;Pfam:PF11622; E()=2.1E-80;score=267.7;query 20-176;description=DUF3251; putative lipoprotein complement(509203..509742) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759327 YP_005231551.1 CDS STMMW_04851 NC_016854.1 509894 510343 D pfam_scan;Pfam:PF03477; E()=3.8E-21;score=74.9;query50-136;description=ATP-cone; hypothetical protein 509894..510343 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759328 YP_005231552.1 CDS STMMW_04861 NC_016854.1 510347 511450 D pfam_scan;Pfam:PF00383; E()=2.8E-25;score=87.9;query2- 99;description=dCMP_cyt_deam_1; pfam_scan;Pfam:PF01872; E()=2.0E-61;score=206.4;query 147-362;description=RibD_C; riboflavin biosynthesis protein RibD 510347..511450 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759329 YP_005231553.1 CDS STMMW_04871 NC_016854.1 511539 512009 D pfam_scan;Pfam:PF00885; E()=7.8E-60;score=200.3;query 12-153;description=DMRL_synthase; 6,7-dimethyl-8-ribityllumazine synthase 511539..512009 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759330 YP_005231554.1 CDS STMMW_04881 NC_016854.1 512030 512449 D pfam_scan;Pfam:PF01029; E()=1.1E-35;score=122.0;query 7-131;description=NusB; N utilization substance protein B 512030..512449 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759331 YP_005231555.1 CDS STMMW_04891 NC_016854.1 512528 513505 D pfam_scan;Pfam:PF00586; E()=1.3E-26;score=92.0;query28-123;description=AIRS; pfam_scan;Pfam:PF02769; E()=1.0E-10;score=41.0;query150-299;description=AIRS_C; thiamine-monophosphate kinase 512528..513505 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759332 YP_005231556.1 CDS STMMW_04901 NC_016854.1 513483 513998 D pfam_scan;Pfam:PF04608; E()=1.5E-56;score=189.8;query 21-162;description=PgpA; tmhmm; query 1-172; phosphatidylglycerophosphatase A 513483..513998 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759333 YP_005231557.1 CDS STMMW_04911 NC_016854.1 514102 515076 R pfam_scan;Pfam:PF00248; E()=1.8E-78;score=262.9;query 15-313;description=Aldo_ket_red; putative oxidoreductase complement(514102..515076) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759334 YP_005231558.1 CDS STMMW_04921 NC_016854.1 515133 516995 R pfam_scan;Pfam:PF02779; E()=7.9E-47;score=158.4;query 321-481;description=Transket_pyr; pfam_scan;Pfam:PF02780; E()=1.3E-27;score=95.6;query495- 611;description=Transketolase_C; pfam_scan;Pfam:PF00676; E()=4.5E-7;score=28.9;query 89-186;description=E1_dh; 1-deoxy-D-xylulose-5-phosphate synthase complement(515133..516995) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759335 YP_005231559.1 CDS STMMW_04931 NC_016854.1 517019 517918 R pfam_scan;Pfam:PF00348; E()=5.5E-92;score=307.5;query 33-294;description=polyprenyl_synt; geranyltranstransferase complement(517019..517918) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759336 YP_005231560.1 CDS STMMW_04941 NC_016854.1 517919 518161 R pfam_scan;Pfam:PF02609; E()=7.2E-22;score=76.6;query11- 63;description=Exonuc_VII_S; exodeoxyribonuclease small subunit complement(517919..518161) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759337 YP_005231561.1 CDS STMMW_04951 NC_016854.1 518371 519819 D pfam_scan;Pfam:PF02568; E()=8.5E-72;score=240.3;query 175-368;description=ThiI; pfam_scan;Pfam:PF02926; E()=4.6E-22;score=77.5;query76-162;description=THUMP; thiamine biosynthesis protein ThiI 518371..519819 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759338 YP_005231562.1 CDS STMMW_04961 NC_016854.1 519863 520660 R pfam_scan;Pfam:PF00528; E()=1.1E-16;score=60.4;query80- 263;description=BPD_transp_1; tmhmm; query 1-266; membrane component of 2-aminoethylphosphonate transporter complement(519863..520660) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759339 YP_005231563.1 CDS STMMW_04971 NC_016854.1 520663 521523 R pfam_scan;Pfam:PF00528; E()=6.3E-16;score=58.0;query84- 282;description=BPD_transp_1; tmhmm; query 1-287; membrane component of 2-aminoethylphosphonate transporter complement(520663..521523) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759340 YP_005231564.1 CDS STMMW_04981 NC_016854.1 521526 522635 R pfam_scan;Pfam:PF08402; E()=6.6E-13;score=48.4;query294-366;description=TOBE_2; pfam_scan;Pfam:PF00005; E()=2.2E-46;score=158.1;query 44-210;description=ABC_tran; ATP-binding component of 2-aminoethylphosphonate transporter complement(521526..522635) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759341 YP_005231565.1 CDS STMMW_04991 NC_016854.1 522641 523585 R pfam_scan;Pfam:PF01547; E()=1.6E-27;score=96.6;query14-253;description=SBP_bac_1; periplasmic binding component of 2-aminoethylphosphonate transporter complement(522641..523585) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759342 YP_005231566.1 CDS STMMW_05001 NC_016854.1 523852 524571 R pfam_scan;Pfam:PF00392; E()=2.8E-18;score=65.2;query12-73;description=GntR; pfam_scan;Pfam:PF07702; E()=1.5E-36;score=124.9;query 94-232;description=UTRA; regulator of 2-aminoethylphosphonate uptake and metabolism operon complement(523852..524571) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759343 YP_005231567.1 CDS STMMW_05011 NC_016854.1 524711 525814 D pfam_scan;Pfam:PF00266; E()=1.8E-23;score=82.5;query40- 304;description=Aminotran_5; 2-aminoethylphosphonate--pyruvate transaminase 524711..525814 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759344 YP_005231568.1 CDS STMMW_05021 NC_016854.1 525821 526633 D pfam_scan;Pfam:PF00702; E()=6.6E-20;score=71.7;query6-205;description=Hydrolase; phosphonoacetaldehyde phosphonohydrolase 525821..526633 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759345 YP_005231569.1 CDS STMMW_05031 NC_016854.1 526730 527320 R pfam_scan;Pfam:PF01965; E()=2.4E-38;score=130.5;query 32-172;description=DJ-1_PfpI; 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein complement(526730..527320) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759346 YP_005231570.1 CDS STMMW_05041 NC_016854.1 527283 528194 R pfam_scan;Pfam:PF02558; E()=5.0E-27;score=94.2;query3-142;description=ApbA; pfam_scan;Pfam:PF08546; E()=4.3E-39;score=132.8;query 168-289;description=ApbA_C; ApbA protein; 2-dehydropantoate 2-reductase complement(527283..528194) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759347 YP_005231571.1 CDS STMMW_05051 NC_016854.1 528302 528811 D pfam_scan;Pfam:PF04461; E()=1.1E-65;score=220.1;query 7-168;description=DUF520; hypothetical protein 528302..528811 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759348 YP_005231572.1 CDS STMMW_05061 NC_016854.1 528858 530207 R pfam_scan;Pfam:PF07690; E()=5.6E-44;score=150.5;query 15-349;description=MFS_1; tmhmm; query 1-450; major facilitator family transport protein complement(528858..530207) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759349 YP_005231573.1 CDS STMMW_05081 NC_016854.1 530759 532270 D pfam_scan;Pfam:PF08238; E()=5.2E-7;score=29.1;query 237-275;description=Sel1; hypothetical protein 530759..532270 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759351 YP_005231574.1 CDS STMMW_05091 NC_016854.1 532492 533775 D pfam_scan;Pfam:PF08238; E()=4.6E-8;score=32.4;query 171-207;description=Sel1; hypothetical protein 532492..533775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759352 YP_005231575.1 CDS STMMW_05101 NC_016854.1 533857 534747 R pfam_scan;Pfam:PF01040; E()=2.7E-36;score=124.9;query 19-271;description=UbiA; tmhmm; query 1-297; cytochrome o ubiquinol oxidase C subunit complement(533857..534747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759353 YP_005231576.1 CDS STMMW_05111 NC_016854.1 534759 535088 R pfam_scan;Pfam:PF03626; E()=5.5E-34;score=115.4;query 18-100;description=COX4_pro; tmhmm; query 1-110; cytochrome o ubiquinol oxidase C subunit complement(534759..535088) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759354 YP_005231577.1 CDS STMMW_05121 NC_016854.1 535088 535603 R pfam_scan;Pfam:PF00510; E()=6.3E-19;score=67.8;query30-169;description=COX3; tmhmm; query 1-172; cytochrome o ubiquinol oxidase subunit III complement(535088..535603) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759355 YP_005231578.1 CDS STMMW_05131 NC_016854.1 535692 537683 R pfam_scan;Pfam:PF00115; E()=1.4E-165;score=550.9;query 54-504;description=COX1; tmhmm; query 1-664; cytochrome O ubiquinol oxidase subunit I complement(535692..537683) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759356 YP_005231579.1 CDS STMMW_05141 NC_016854.1 537694 538650 R pfam_scan;Pfam:PF00116; E()=1.7E-7;score=30.5;query 149-220;description=COX2; pfam_scan;Pfam:PF06481; E()=2.5E-18;score=64.4;query239-286;description=COX_ARM; tmhmm; query 1-319; cytochrome o ubiquinol oxidase subunit II complement(537694..538650) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759357 YP_005231580.1 CDS STMMW_05151 NC_016854.1 539103 540578 R pfam_scan;Pfam:PF07690; E()=2.7E-29;score=102.2;query 17-366;description=MFS_1; tmhmm; query 1-492; AmpG protein complement(539103..540578) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759358 YP_005231581.1 CDS STMMW_05161 NC_016854.1 540622 541254 R pfam_scan;Pfam:PF03923; E()=1.7E-50;score=170.5;query 47-206;description=Lipoprotein_16; pfam_scan;Pfam:PF08139; E()=2.5E-4;score=20.9;query 19-38;description=VirB; putative lipoprotein complement(540622..541254) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759359 YP_005231582.1 CDS STMMW_05171 NC_016854.1 541504 541821 D pfam_scan;Pfam:PF01722; E()=4.8E-27;score=93.1;query10-85;description=BolA; BolA protein 541504..541821 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759360 YP_005231583.1 CDS STMMW_05181 NC_016854.1 542168 543466 D pfam_scan;Pfam:PF05697; E()=3.2E-49;score=165.9;query 1-145;description=Trigger_N; pfam_scan;Pfam:PF05698; E()=1.7E-47;score=161.0;query 239-408;description=Trigger_C; pfam_scan;Pfam:PF00254; E()=9.9E-19;score=67.1;query154-237;description=FKBP_C; trigger factor 542168..543466 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759361 YP_005231584.1 CDS STMMW_05191 NC_016854.1 543713 544336 D pfam_scan;Pfam:PF00574; E()=5.9E-93;score=309.1;query 25-205;description=CLP_protease; ATP-dependent Clp protease proteolytic subunit 543713..544336 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759362 YP_005231585.1 CDS STMMW_05201 NC_016854.1 544588 545859 D pfam_scan;Pfam:PF10431; E()=5.7E-10;score=38.8;query317-394;description=ClpB_D2- small; pfam_scan;Pfam:PF06689; E()=2.4E-20;score=70.9;query13-51;description=zf-C4_ClpX; pfam_scan;Pfam:PF07724; E()=4.9E-30;score=104.1;query 112-310;description=AAA_2; ATP-dependent Clp protease ATP-binding subunit ClpX 544588..545859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759363 YP_005231586.1 CDS STMMW_05211 NC_016854.1 546045 548399 D pfam_scan;Pfam:PF00004; E()=1.9E-19;score=69.6;query352-489;description=AAA; pfam_scan;Pfam:PF02190; E()=4.2E-60;score=202.6;query 10-201;description=LON; pfam_scan;Pfam:PF05362; E()=3.1E-99;score=330.3;query 570-772;description=Lon_C; Lon protease 546045..548399 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759364 YP_005231587.1 CDS STMMW_05221 NC_016854.1 548608 548880 D pfam_scan;Pfam:PF00216; E()=3.7E-34;score=116.2;query 1-90;description=Bac_DNA_binding; DNA-binding protein Hu-beta 548608..548880 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759365 YP_005231588.1 CDS STMMW_05231 NC_016854.1 549171 551042 D pfam_scan;Pfam:PF00639; E()=2.6E-15;score=56.2;query276-354;description=Rotamase; pfam_scan;Pfam:PF09312; E()=4.6E-5;score=22.8;query 70-164;description=SurA_N; tmhmm; query 1-624; peptidyl-prolyl cis-trans isomerase D 549171..551042 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759366 YP_005231589.1 CDS STMMW_05241 NC_016854.1 551192 551566 D pfam_scan;Pfam:PF03934; E()=3.3E-6;score=25.6;query 59-112;description=GspK; hypothetical protein 551192..551566 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759367 YP_005231590.1 CDS STMMW_05251 NC_016854.1 551670 552068 D pfam_scan;Pfam:PF03061; E()=7.1E-15;score=53.9;query16-97;description=4HBT; hypothetical protein 551670..552068 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759368 YP_005231591.1 CDS STMMW_05261 NC_016854.1 552174 552869 R pfam_scan;Pfam:PF06508; E()=1.9E-71;score=239.0;query 3-172;description=ExsB; hypothetical protein complement(552174..552869) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759369 YP_005231592.1 CDS STMMW_05271 NC_016854.1 552934 554634 R pfam_scan;Pfam:PF00496; E()=4.9E-22;score=78.1;query168-304;description=SBP_bac_5; Putative solute-binding protein complement(552934..554634) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759370 YP_005231593.1 CDS STMMW_05281 NC_016854.1 554735 555553 D pfam_scan;Pfam:PF08282; E()=9.4E-56;score=188.8;query 6-258;description=Hydrolase_3; hypothetical protein 554735..555553 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759371 YP_005231594.1 CDS STMMW_05291 NC_016854.1 555603 556658 R pfam_scan;Pfam:PF00291; E()=5.5E-48;score=163.8;query 23-315;description=PALP; putative lyase complement(555603..556658) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759372 YP_005231595.1 CDS STMMW_05301 NC_016854.1 556771 557229 D pfam_scan;Pfam:PF01037; E()=1.5E-21;score=75.4;query68- 142;description=AsnC_trans_reg; transcriptional regulator 556771..557229 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759373 YP_005231596.1 CDS STMMW_05311 NC_016854.1 557270 559042 D pfam_scan;Pfam:PF00664; E()=2.4E-40;score=138.0;query 23-290;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=1.2E-39;score=136.0;query 362-531;description=ABC_tran; tmhmm; query 1-591; putative ABC transporter ATP-binding membrane protein 557270..559042 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759374 YP_005231597.1 CDS STMMW_05321 NC_016854.1 559035 560816 D pfam_scan;Pfam:PF00664; E()=3.3E-34;score=117.9;query 28-297;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=7.2E-39;score=133.5;query 369-535;description=ABC_tran; tmhmm; query 1-594; putative ABC transporter ATP-binding membrane protein 559035..560816 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759375 YP_005231598.1 CDS STMMW_05331 NC_016854.1 561029 561367 D pfam_scan;Pfam:PF00543; E()=2.8E-43;score=146.1;query 4-105;description=P-II; nitrogen regulatory protein P-II 561029..561367 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759376 YP_005231599.1 CDS STMMW_05341 NC_016854.1 561399 562685 D pfam_scan;Pfam:PF00909; E()=5.4E-137;score=456.6;query 33-426;description=Ammonium_transp; tmhmm; query 1-429; ammonium transporter 561399..562685 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759377 YP_005231600.1 CDS STMMW_05351 NC_016854.1 562785 563645 R pfam_scan;Pfam:PF02551; E()=6.0E-13;score=48.1;query20- 103;description=Acyl_CoA_thio; acyl-CoA thioesterase II complement(562785..563645) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759378 YP_005231601.1 CDS STMMW_05361 NC_016854.1 563860 564429 D Signal peptide; signalp; query 1-21;cleavage_site_probability=0.983; 0.997; hypothetical protein 563860..564429 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759379 YP_005231602.1 CDS STMMW_05371 NC_016854.1 564462 564851 R pfam_scan;Pfam:PF01035; E()=2.4E-26;score=90.8;query32- 114;description=DNA_binding_1; putative methylated-DNA methyltransferase complement(564462..564851) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759380 YP_005231603.1 CDS STMMW_05381 NC_016854.1 565082 566632 R pfam_scan;Pfam:PF00563; E()=1.3E-69;score=233.9;query 273-502;description=EAL; tmhmm; query 1-517; 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence complement(565082..566632) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759381 YP_005231604.1 CDS STMMW_05391 NC_016854.1 566857 567117 D pfam_scan;Pfam:PF01197; E()=1.0E-23;score=82.4;query1- 79;description=Ribosomal_L31; putative 50S ribosomal protein L31 (second copy) 566857..567117 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759382 YP_005231605.1 CDS STMMW_05401 NC_016854.1 567123 567263 D pfam_scan;Pfam:PF00444; E()=8.2E-17;score=60.3;query1- 41;description=Ribosomal_L36; putative 50S ribosomal protein L36 (second copy) 567123..567263 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759383 YP_005231606.1 CDS STMMW_05411 NC_016854.1 567319 567789 R pfam_scan;Pfam:PF10777; E()=4.3E-73;score=243.6;query 1-154;description=YlaC; tmhmm; query 1-157; hypothetical protein complement(567319..567789) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759384 YP_005231607.1 CDS STMMW_05421 NC_016854.1 567906 568457 R pfam_scan;Pfam:PF00132; E()=0.0065;score=16.1;query 95-109;description=Hexapep; maltose O-acetyltransferase complement(567906..568457) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759385 YP_005231608.1 CDS STMMW_05431 NC_016854.1 568636 568854 R pfam_scan;Pfam:PF05321; E()=1.3E-29;score=101.2;query 13-69;description=HHA; hemolysin expression modulating protein complement(568636..568854) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759386 YP_005231609.1 CDS STMMW_05441 NC_016854.1 568882 569256 R pfam_scan;Pfam:PF10757; E()=4.4E-70;score=232.7;query 1-121;description=YbaJ; hypothetical protein complement(568882..569256) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759387 YP_005231610.1 CDS STMMW_05451 NC_016854.1 569752 572901 R pfam_scan;Pfam:PF00873; E()=0.0;score=1491.3;query 1-1030;description=ACR_tran; tmhmm; query 1-1050; acriflavin resistance protein B complement(569752..572901) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759388 YP_005231611.1 CDS STMMW_05461 NC_016854.1 572924 574117 R pfam_scan;Pfam:PF00529; E()=2.6E-83;score=279.7;query 64-361;description=HlyD; acriflavin resistance protein A complement(572924..574117) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759389 YP_005231612.1 CDS STMMW_05471 NC_016854.1 574259 574912 D pfam_scan;Pfam:PF08361; E()=1.3E-55;score=185.9;query 84-203;description=TetR_C_2; pfam_scan;Pfam:PF00440; E()=5.1E-20;score=70.2;query16-62;description=TetR_N; acrAB operon repressor 574259..574912 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759390 YP_005231613.1 CDS STMMW_05481 NC_016854.1 575031 578393 D pfam_scan;Pfam:PF00924; E()=9.7E-67;score=223.8;query 887-1087;description=MS_channel; tmhmm; query 1-1121; integral membrane protein AefA 575031..578393 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759391 YP_005231614.1 CDS STMMW_05491 NC_016854.1 578435 579370 R pfam_scan;Pfam:PF04754; E()=3.7E-108;score=359.9;query 7-253;description=Transposase_31; hypothetical protein complement(578435..579370) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760215 YP_005231615.1 CDS STMMW_05501 NC_016854.1 579440 579607 R pfam_scan;Pfam:PF10689; E()=1.0E-21;score=75.5;query2-45;description=DUF2496; hypothetical protein complement(579440..579607) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760216 YP_005231616.1 CDS STMMW_05511 NC_016854.1 579621 580136 R pfam_scan;Pfam:PF07445; E()=3.2E-61;score=205.2;query 3-171;description=priB_priC; primosomal replication protein n complement(579621..580136) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760217 YP_005231617.1 CDS STMMW_05521 NC_016854.1 580217 580594 D pfam_scan;Pfam:PF04304; E()=7.1E-21;score=73.5;query46-115;description=DUF454; tmhmm; query 1-126; hypothetical protein 580217..580594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760218 YP_005231618.1 CDS STMMW_05531 NC_016854.1 580747 581298 D pfam_scan;Pfam:PF00156; E()=3.3E-25;score=87.9;query33- 156;description=Pribosyltran; adenine phosphoribosyltransferase 580747..581298 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760219 YP_005231619.1 CDS STMMW_05541 NC_016854.1 581412 583340 D pfam_scan;Pfam:PF00004; E()=8.5E-10;score=38.4;query42-170;description=AAA; DNA polymerase III subunits gamma and tau 581412..583340 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760220 YP_005231620.1 CDS STMMW_05551 NC_016854.1 583362 583715 D pfam_scan;Pfam:PF02575; E()=5.0E-38;score=128.8;query 19-110;description=DUF149; hypothetical protein 583362..583715 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760221 YP_005231621.1 CDS STMMW_05561 NC_016854.1 583715 584320 D pfam_scan;Pfam:PF02132; E()=1.3E-15;score=55.8;query40-78;description=RecR; pfam_scan;Pfam:PF01751; E()=5.6E-16;score=58.0;query82-173;description=Toprim; recombination protein RecR 583715..584320 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760222 YP_005231622.1 CDS STMMW_05571 NC_016854.1 584407 586305 D pfam_scan;Pfam:PF02518; E()=8.5E-10;score=38.0;query39-189;description=HATPase_c; pfam_scan;Pfam:PF00183; E()=1.1E-115;score=386.6;query 220-630;description=HSP90; heat shock protein HtpG 584407..586305 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760223 YP_005231623.1 CDS STMMW_05581 NC_016854.1 586546 587190 D pfam_scan;Pfam:PF05191; E()=1.4E-15;score=56.4;query123-158;description=ADK_lid; pfam_scan;Pfam:PF00406; E()=1.2E-60;score=203.4;query 5-186;description=ADK; adenylate kinase 586546..587190 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760224 YP_005231624.1 CDS STMMW_05591 NC_016854.1 587419 588381 D pfam_scan;Pfam:PF00762; E()=1.6E-123;score=410.9;query 5-316;description=Ferrochelatase; ferrochelatase 587419..588381 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760225 YP_005231625.1 CDS STMMW_05601 NC_016854.1 588378 589349 R pfam_scan;Pfam:PF07859; E()=4.7E-53;score=179.5;query 88-295;description=Abhydrolase_3; acetyl esterase complement(588378..589349) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760226 YP_005231626.1 CDS STMMW_05611 NC_016854.1 589502 590806 D pfam_scan;Pfam:PF00294; E()=1.7E-23;score=83.0;query72-294;description=PfkB; inosine-guanosine kinase 589502..590806 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760227 YP_005231627.1 CDS STMMW_05621 NC_016854.1 590855 592531 R pfam_scan;Pfam:PF00999; E()=1.6E-76;score=257.5;query 14-384;description=Na_H_Exchanger; pfam_scan;Pfam:PF02254; E()=3.6E-25;score=88.1;query421-534;description=TrkA_N; tmhmm; query 1-559; putative transport protein complement(590855..592531) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760228 YP_005231628.1 CDS STMMW_05631 NC_016854.1 592746 593966 R pfam_scan;Pfam:PF07690; E()=1.2E-25;score=90.2;query31-261;description=MFS_1; tmhmm; query 1-407; fosmidomycin resistance protein complement(592746..593966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760229 YP_005231629.1 CDS STMMW_05641 NC_016854.1 594139 595791 D pfam_scan;Pfam:PF00149; E()=4.5E-21;score=74.2;query35- 253;description=Metallophos; pfam_scan;Pfam:PF02872; E()=3.6E-33;score=114.1;query 363-508;description=5_nucleotid_C; UDP-sugar hydrolase 594139..595791 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760230 YP_005231630.1 CDS STMMW_05651 NC_016854.1 595908 596387 R pfam_scan;Pfam:PF04073; E()=1.5E-25;score=88.9;query31-146;description=YbaK; hypothetical protein complement(595908..596387) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760231 YP_005231631.1 CDS STMMW_05661 NC_016854.1 596589 597383 R pfam_scan;Pfam:PF07446; E()=9.7E-44;score=149.2;query 30-264;description=GumN; hypothetical protein complement(596589..597383) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760232 YP_005231632.1 CDS STMMW_05671 NC_016854.1 597469 598296 R pfam_scan;Pfam:PF07007; E()=6.5E-9;score=35.4;query 193-271;description=DUF1311; secreted protein complement(597469..598296) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760233 YP_005231633.1 CDS STMMW_05681 NC_016854.1 598450 600951 R pfam_scan;Pfam:PF00403; E()=7.5E-10;score=38.3;query7-61;description=HMA; pfam_scan;Pfam:PF00702; E()=2.7E-40;score=138.2;query 517-739;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=1.7E-65;score=220.1;query 290-511;description=E1-E2_ATPase; tmhmm; query 1-834; copper-transporting ATPase complement(598450..600951) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760234 YP_005231634.1 CDS STMMW_05691 NC_016854.1 601061 601477 D pfam_scan;Pfam:PF09278; E()=4.0E-17;score=61.6;query45-108;description=MerR-DNA- bind; pfam_scan;Pfam:PF00376; E()=3.1E-15;score=54.9;query2-39;description=MerR; copper efflux regulator 601061..601477 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760235 YP_005231635.1 CDS STMMW_05701 NC_016854.1 601478 601930 R pfam_scan;Pfam:PF01957; E()=1.0E-23;score=83.8;query12-148;description=NfeD; tmhmm; query 1-151; hypothetical protein complement(601478..601930) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760236 YP_005231636.1 CDS STMMW_05711 NC_016854.1 601927 602844 R pfam_scan;Pfam:PF01145; E()=1.7E-40;score=138.5;query 21-203;description=Band_7; tmhmm; query 1-306; hypothetical protein complement(601927..602844) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760237 YP_005231637.1 CDS STMMW_05721 NC_016854.1 602991 603668 D pfam_scan;Pfam:PF00005; E()=9.9E-37;score=126.6;query 33-199;description=ABC_tran; putative ABC transporter ATP-binding protein 602991..603668 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760238 YP_005231638.1 CDS STMMW_05731 NC_016854.1 603655 604434 D pfam_scan;Pfam:PF03649; E()=2.5E-110;score=367.3;query 3-247;description=UPF0014; tmhmm; query 1-260; hypothetical protein 603655..604434 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760239 YP_005231639.1 CDS STMMW_05741 NC_016854.1 604520 605374 R pfam_scan;Pfam:PF00085; E()=2.0E-19;score=68.8;query7-108;description=Thioredoxin; thioredoxin-like protein complement(604520..605374) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760240 YP_005231640.1 CDS STMMW_05751 NC_016854.1 605434 606204 R pfam_scan;Pfam:PF00106; E()=4.9E-21;score=75.0;query3-164;description=adh_short; oxidoreductase complement(605434..606204) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760241 YP_005231641.1 CDS STMMW_05761 NC_016854.1 606359 606973 R pfam_scan;Pfam:PF00657; E()=1.3E-31;score=109.3;query 29-194;description=Lipase_GDSL; tmhmm; query 1-205; acyl-coA thioesterase I complement(606359..606973) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760242 YP_005231642.1 CDS STMMW_05771 NC_016854.1 606944 607630 D pfam_scan;Pfam:PF00005; E()=4.0E-47;score=160.5;query 36-207;description=ABC_tran; ABC transporter ATP-binding protein 606944..607630 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760243 YP_005231643.1 CDS STMMW_05781 NC_016854.1 607627 610041 D pfam_scan;Pfam:PF02687; E()=1.3E-17;score=63.2;query235-364;description=FtsX; tmhmm; query 1-805; hypothetical protein 607627..610041 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760244 YP_005231644.1 CDS STMMW_05791 NC_016854.1 610227 611360 D Signal peptide; signalp; query 1-26;cleavage_site_probability=0.899; 1.000; outer membrane protein 610227..611360 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760245 YP_005231645.1 CDS STMMW_05801 NC_016854.1 611617 612447 D pfam_scan;Pfam:PF03180; E()=3.2E-77;score=258.7;query 32-259;description=Lipoprotein_9; lipoprotein 611617..612447 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760246 YP_005231646.1 CDS STMMW_05811 NC_016854.1 612484 613500 D pfam_scan;Pfam:PF00005; E()=7.7E-52;score=175.9;query 32-203;description=ABC_tran; pfam_scan;Pfam:PF09383; E()=4.6E-22;score=77.4;query260-336;description=NIL; ABC transporter ATP-binding protein 612484..613500 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760247 YP_005231647.1 CDS STMMW_05821 NC_016854.1 613493 614152 D pfam_scan;Pfam:PF00528; E()=2.8E-21;score=75.4;query30- 215;description=BPD_transp_1; tmhmm; query 1-220; ABC transporter 613493..614152 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760248 YP_005231648.1 CDS STMMW_05831 NC_016854.1 614191 615285 R pfam_scan;Pfam:PF00581; E()=3.3E-8;score=33.0;query 13-129;description=Rhodanese; hypothetical protein complement(614191..615285) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760249 YP_005231649.1 CDS STMMW_05841 NC_016854.1 615355 616281 R pfam_scan;Pfam:PF00126; E()=9.7E-18;score=63.4;query5-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.8E-18;score=65.4;query105- 290;description=LysR_substrate; lysR family transcriptional regulator complement(615355..616281) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760250 YP_005231650.1 CDS STMMW_05851 NC_016854.1 616508 616990 D pfam_scan;Pfam:PF04115; E()=3.4E-57;score=191.8;query 2-154;description=Ureidogly_hydro; ureidoglycolate hydrolase 616508..616990 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760251 YP_005231651.1 CDS STMMW_05861 NC_016854.1 617069 617887 D pfam_scan;Pfam:PF01614; E()=1.4E-38;score=131.4;query 140-263;description=IclR; pfam_scan;Pfam:PF09339; E()=2.6E-12;score=46.0;query23-73;description=HTH_IclR; negative regulator of allantoin and glyoxylate utilization operons 617069..617887 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760252 YP_005231652.1 CDS STMMW_05871 NC_016854.1 617972 619753 D pfam_scan;Pfam:PF00205; E()=2.2E-40;score=136.8;query 193-328;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=1.3E-54;score=184.1;query 4-173;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=3.5E-35;score=120.8;query 393-553;description=TPP_enzyme_C; glyoxylate carboligase 617972..619753 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760253 YP_005231653.1 CDS STMMW_05881 NC_016854.1 619766 620542 D pfam_scan;Pfam:PF01261; E()=1.0E-44;score=152.0;query 21-219;description=AP_endonuc_2; glyoxylate-induced protein 619766..620542 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760254 YP_005231654.1 CDS STMMW_05891 NC_016854.1 620643 621521 D pfam_scan;Pfam:PF03446; E()=2.9E-51;score=173.0;query 2-160;description=NAD_binding_2; 2-hydroxy-3-oxopropionate reductase 620643..621521 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760255 YP_005231655.1 CDS STMMW_05901 NC_016854.1 621578 622834 D pfam_scan;Pfam:PF07690; E()=2.2E-52;score=178.1;query 28-370;description=MFS_1; tmhmm; query 1-419; putative permease 621578..622834 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760256 YP_005231656.1 CDS STMMW_05921 NC_016854.1 624188 625486 D pfam_scan;Pfam:PF00860; E()=6.1E-80;score=268.7;query 8-393;description=Xan_ur_permease; tmhmm; query 1-433; putative permease 624188..625486 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760258 YP_005231657.1 CDS STMMW_05931 NC_016854.1 625509 626657 D pfam_scan;Pfam:PF02595; E()=2.1E-174;score=579.1;query 1-377;description=Gly_kinase; glycerate kinase 625509..626657 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760259 YP_005231658.1 CDS STMMW_05941 NC_016854.1 626737 627522 R pfam_scan;Pfam:PF11699; E()=6.1E-6;score=25.4;query 84-131;description=Mif2; pfam_scan;Pfam:PF07883; E()=2.8E-7;score=29.8;query 184-230;description=Cupin_2; putative glyoxylate utilization complement(626737..627522) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760260 YP_005231659.1 CDS STMMW_05951 NC_016854.1 627533 628768 R pfam_scan;Pfam:PF07687; E()=1.3E-5;score=24.3;query 212-310;description=M20_dimer; pfam_scan;Pfam:PF01546; E()=1.7E-31;score=109.3;query 80-404;description=Peptidase_M20; allantoate amidohydrolase complement(627533..628768) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760261 YP_005231660.1 CDS STMMW_05961 NC_016854.1 628790 629839 R pfam_scan;Pfam:PF02615; E()=1.4E-134;score=447.7;query 1-333;description=Ldh_2; ureidoglycolate dehydrogenase complement(628790..629839) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760262 YP_005231661.1 CDS STMMW_05971 NC_016854.1 630170 631834 D pfam_scan;Pfam:PF02629; E()=8.5E-12;score=45.0;query193- 287;description=CoA_binding; pfam_scan;Pfam:PF00549; E()=1.1E-33;score=115.6;query 335-489;description=Ligase_CoA; putative acyl-CoA synthetase, involved in protein transport 630170..631834 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760263 YP_005231662.1 CDS STMMW_05981 NC_016854.1 631844 633103 D pfam_scan;Pfam:PF06545; E()=4.0E-101;score=336.2;query 87-303;description=DUF1116; hypothetical protein 631844..633103 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760264 YP_005231663.1 CDS STMMW_05991 NC_016854.1 633115 633924 D pfam_scan;Pfam:PF11392; E()=7.4E-29;score=99.8;query158-265;description=DUF2877; hypothetical protein 633115..633924 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760265 YP_005231664.1 CDS STMMW_06001 NC_016854.1 633928 634821 D pfam_scan;Pfam:PF00696; E()=8.8E-21;score=74.3;query2-277;description=AA_kinase; carbamate kinase 633928..634821 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760266 YP_005231665.1 CDS STMMW_06011 NC_016854.1 634862 635929 R pfam_scan;Pfam:PF02222; E()=1.6E-56;score=190.8;query 79-253;description=ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(634862..635929) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760267 YP_005231666.1 CDS STMMW_06021 NC_016854.1 635926 636435 R pfam_scan;Pfam:PF00731; E()=7.4E-71;score=236.2;query 9-159;description=AIRC; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(635926..636435) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760268 YP_005231667.1 CDS STMMW_06031 NC_016854.1 636553 637275 R pfam_scan;Pfam:PF00149; E()=3.2E-14;score=51.9;query4-199;description=Metallophos; hypothetical protein complement(636553..637275) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760269 YP_005231668.1 CDS STMMW_06041 NC_016854.1 637278 637772 R pfam_scan;Pfam:PF00160; E()=7.5E-48;score=161.9;query 2-162;description=Pro_isomerase; peptidyl-prolyl cis-trans isomerase B complement(637278..637772) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760270 YP_005231669.1 CDS STMMW_06051 NC_016854.1 637945 639330 D pfam_scan;Pfam:PF01406; E()=3.3E-148;score=492.1;query 15-313;description=tRNA-synt_1e; pfam_scan;Pfam:PF09190; E()=1.6E-24;score=85.4;query341-402;description=DALR_2; cysteinyl-tRNA synthetase 637945..639330 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760271 YP_005231670.1 CDS STMMW_06061 NC_016854.1 639374 640198 R pfam_scan;Pfam:PF09916; E()=6.5E-70;score=234.0;query 46-245;description=DUF2145; putative exported outer membrane protein complement(639374..640198) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760272 YP_005231671.1 CDS STMMW_06071 NC_016854.1 640195 640632 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.971; 1.000; hypothetical protein complement(640195..640632) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760273 YP_005231672.1 CDS STMMW_06081 NC_016854.1 640625 641170 R pfam_scan;Pfam:PF04307; E()=1.5E-17;score=62.9;query33-118;description=DUF457; tmhmm; query 1-182; hypothetical protein complement(640625..641170) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760274 YP_005231673.1 CDS STMMW_06091 NC_016854.1 641298 641510 R hypothetical protein complement(641298..641510) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760275 YP_005231674.1 CDS STMMW_06101 NC_016854.1 641512 642378 R pfam_scan;Pfam:PF00763; E()=3.6E-42;score=142.9;query 4-121;description=THF_DHG_CYH; pfam_scan;Pfam:PF02882; E()=6.1E-69;score=230.4;query 124-279;description=THF_DHG_CYH_C; methenyltetrahydrofolate cyclohydrolase; FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase complement(641512..642378) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760276 YP_005231675.1 CDS STMMW_06111 NC_016854.1 642925 643482 D pfam_scan;Pfam:PF00419; E()=9.2E-48;score=162.2;query 33-185;description=Fimbrial; type-1 fimbrial protein, a chain precursor 642925..643482 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760277 YP_005231676.1 CDS STMMW_06121 NC_016854.1 643558 644091 D pfam_scan;Pfam:PF00419; E()=2.1E-27;score=96.2;query27-176;description=Fimbrial; major pilin protein 643558..644091 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760278 YP_005231677.1 CDS STMMW_06131 NC_016854.1 644135 644827 D pfam_scan;Pfam:PF00345; E()=2.4E-41;score=140.2;query 26-145;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=3.4E-22;score=77.9;query151- 225;description=Pili_assembly_C; tmhmm; query 1-231; fimbrial chaperone protein 644135..644827 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760279 YP_005231678.1 CDS STMMW_06141 NC_016854.1 644858 647470 D pfam_scan;Pfam:PF00577; E()=0.0;score=1012.9;query 39-849;description=Usher; outer membrane usher protein FimD 644858..647470 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760280 YP_005231679.1 CDS STMMW_06151 NC_016854.1 647485 648492 D Signal peptide; signalp; query 1-23;cleavage_site_probability=0.997; 1.000; FimH protein 647485..648492 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760281 YP_005231680.1 CDS STMMW_06161 NC_016854.1 648502 649020 D pfam_scan;Pfam:PF00419; E()=5.0E-38;score=130.6;query 29-172;description=Fimbrial; putative fimbrial protein 648502..649020 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760282 YP_005231681.1 CDS STMMW_06171 NC_016854.1 649066 649698 R pfam_scan;Pfam:PF00196; E()=2.7E-23;score=80.7;query148-204;description=GerE; pfam_scan;Pfam:PF00072; E()=7.6E-27;score=93.2;query6- 118;description=Response_reg; transcriptional regulator (FimXZ protein) complement(649066..649698) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760283 YP_005231682.1 CDS STMMW_06181 NC_016854.1 650302 651024 R fimbriae Y protein complement(650302..651024) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760284 YP_005231683.1 CDS STMMW_06191 NC_016854.1 651043 651354 R hypothetical protein complement(651043..651354) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760285 YP_005231684.1 CDS STMMW_06201 NC_016854.1 651516 652112 R pfam_scan;Pfam:PF00196; E()=4.8E-6;score=25.7;query 134-186;description=GerE; fimbriae w protein complement(651516..652112) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760286 YP_005231685.1 CDS STMMW_06221 NC_016854.1 653009 653227 R pfam_scan;Pfam:PF01527; E()=1.1E-11;score=44.3;query1- 58;description=Transposase_8; transposase complement(653009..653227) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760288 YP_005231686.1 CDS STMMW_06231 NC_016854.1 653614 655266 R tmhmm; query 1-551; hypothetical protein complement(653614..655266) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760289 YP_005231687.1 CDS STMMW_06241 NC_016854.1 655247 656173 R pfam_scan;Pfam:PF00535; E()=3.0E-29;score=101.3;query 4-167;description=Glycos_transf_2; tmhmm; query 1-309; bactoprenol glucosyl transferase complement(655247..656173) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760290 YP_005231688.1 CDS STMMW_06251 NC_016854.1 656170 656532 R pfam_scan;Pfam:PF04138; E()=5.1E-15;score=55.3;query7-116;description=GtrA; tmhmm; query 1-121; bactoprenol-linked glucose translocase complement(656170..656532) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760291 YP_005231689.1 CDS STMMW_06281 NC_016854.1 658068 658922 R pfam_scan;Pfam:PF00165; E()=1.0E-4;score=21.8;query 190-226;description=HTH_AraC; araC family transcriptional regulator complement(658068..658922) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760294 YP_005231690.1 CDS STMMW_06291 NC_016854.1 659138 660463 D pfam_scan;Pfam:PF07992; E()=1.2E-51;score=175.5;query 7-295;description=Pyr_redox_2; pfam_scan;Pfam:PF02852; E()=1.4E-28;score=98.5;query328- 435;description=Pyr_redox_dim; pfam_scan;Pfam:PF00070; E()=3.1E-22;score=78.5;query160-251;description=Pyr_redox; pyridine nucleotide-disulfide oxidoreductase 659138..660463 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760295 YP_005231691.1 CDS STMMW_06301 NC_016854.1 660620 660856 D pfam_scan;Pfam:PF07338; E()=1.9E-11;score=44.0;query20-78;description=DUF1471; hypothetical protein 660620..660856 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760296 YP_005231692.1 CDS STMMW_06311 NC_016854.1 660869 661429 D pfam_scan;Pfam:PF04224; E()=1.5E-59;score=199.4;query 3-180;description=DUF417; tmhmm; query 1-187; hypothetical protein 660869..661429 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760297 YP_005231693.1 CDS STMMW_06321 NC_016854.1 661508 662683 R hypothetical protein complement(661508..662683) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760298 YP_005231694.1 CDS STMMW_06331 NC_016854.1 663009 664403 D pfam_scan;Pfam:PF00324; E()=1.8E-130;score=435.0;query 31-461;description=AA_permease; tmhmm; query 1-465; phenylalanine-specific permease 663009..664403 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760299 YP_005231695.1 CDS STMMW_06341 NC_016854.1 664445 665692 R pfam_scan;Pfam:PF00924; E()=1.9E-40;score=138.0;query 144-397;description=MS_channel; tmhmm; query 1-416; hypothetical protein complement(664445..665692) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760300 YP_005231696.1 CDS STMMW_06351 NC_016854.1 666003 667973 D pfam_scan;Pfam:PF00657; E()=5.5E-11;score=41.9;query30- 342;description=Lipase_GDSL; pfam_scan;Pfam:PF03797; E()=9.4E-36;score=123.0;query 385-641;description=Autotransporter; outer membrane esterase 666003..667973 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760301 YP_005231697.1 CDS STMMW_06361 NC_016854.1 668140 670869 D implicated with sensitivity to mesentericin Y105 by control of the mpt operon in Listeria monocytogenes; pfam_scan;Pfam:PF00158; E()=2.8E-34;score=117.9;query 103-265;description=Sigma54_activat; pfam_scan;Pfam:PF00874; E()=6.3E-13;score=48.2;query815-900;description=PRD; pfam_scan;Pfam:PF03610; E()=1.6E-4;score=21.1;query 550-663;description=EIIA-man; sigma 54-associated activator 668140..670869 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760302 YP_005231698.1 CDS STMMW_06371 NC_016854.1 670997 671983 R pfam_scan;Pfam:PF01380; E()=9.2E-11;score=41.3;query38-122;description=SIS; phospohtase isomerase complement(670997..671983) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760303 YP_005231699.1 CDS STMMW_06381 NC_016854.1 672050 673093 R Putative protein with GTP Binding and GTPase domains; pfam_scan;Pfam:PF01380; E()=2.0E-9;score=37.0;query 32-155;description=SIS; Putative GTP Binding protein complement(672050..673093) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760304 YP_005231700.1 CDS STMMW_06391 NC_016854.1 673126 673980 R similar to a PTS system mannose specific permease; pfam_scan;Pfam:PF03613; E()=3.6E-110;score=366.9;query 21-284;description=EIID-AGA; tmhmm; query 1-285; putative mannose specific permease complement(673126..673980) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760305 YP_005231701.1 CDS STMMW_06401 NC_016854.1 673983 674657 R similar to a PTS system mannose specific permease; pfam_scan;Pfam:PF03609; E()=9.8E-67;score=224.6;query 3-212;description=EII-Sor; tmhmm; query 1-225; putative mannose specific permease complement(673983..674657) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760306 YP_005231702.1 CDS STMMW_06411 NC_016854.1 674741 675211 R similar to a PTS system mannose specific permease; pfam_scan;Pfam:PF03830; E()=1.7E-45;score=154.3;query 1-149;description=PTSIIB_sorb; putative mannose specific permease complement(674741..675211) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760307 YP_005231703.1 CDS STMMW_06421 NC_016854.1 675189 675638 R DSBA-like thioredoxin domain; pfam_scan;Pfam:PF03610; E()=5.9E-19;score=67.6;query6-108;description=EIIA-man; hypothetical protein complement(675189..675638) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760308 YP_005231704.1 CDS STMMW_06431 NC_016854.1 675838 676491 R pfam_scan;Pfam:PF00881; E()=2.7E-29;score=102.2;query 8-193;description=Nitroreductase; oxygen-insensitive NAD(P)H nitroreductase complement(675838..676491) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760309 YP_005231705.1 CDS STMMW_06441 NC_016854.1 676588 676956 R pfam_scan;Pfam:PF04237; E()=9.4E-29;score=99.1;query14-107;description=DUF419; hypothetical protein complement(676588..676956) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760310 YP_005231706.1 CDS STMMW_06451 NC_016854.1 676956 677537 R pfam_scan;Pfam:PF00440; E()=8.7E-11;score=40.9;query13-57;description=TetR_N; putative TetR family transcriptional regulator complement(676956..677537) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760311 YP_005231707.1 CDS STMMW_06461 NC_016854.1 677826 678167 D pfam_scan;Pfam:PF00165; E()=8.0E-7;score=28.5;query 15-55;description=HTH_AraC; transcriptional activator RamA 677826..678167 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760312 YP_005231708.1 CDS STMMW_06472 NC_016854.1 678173 678421 R pfam_scan;Pfam:PF06643; E()=1.0E-48;score=162.7;query 1-82;description=DUF1158; tmhmm; query 1-83; hypothetical protein complement(678173..678421) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760313 YP_005231709.1 CDS STMMW_06481 NC_016854.1 678488 679606 R pfam_scan;Pfam:PF04107; E()=1.1E-89;score=300.0;query 13-292;description=GCS2; hypothetical protein complement(678488..679606) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760314 YP_005231710.1 CDS STMMW_06491 NC_016854.1 679618 680322 R pfam_scan;Pfam:PF01648; E()=5.3E-9;score=35.7;query 104-163;description=ACPS; enterobactin synthetase component D complement(679618..680322) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760315 YP_005231711.1 CDS STMMW_06501 NC_016854.1 680368 682623 R pfam_scan;Pfam:PF07715; E()=9.6E-29;score=99.3;query53-167;description=Plug; pfam_scan;Pfam:PF00593; E()=2.0E-37;score=129.2;query 465-751;description=TonB_dep_Rec; ferrienterobactin receptor complement(680368..682623) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760316 YP_005231712.1 CDS STMMW_06511 NC_016854.1 682812 684026 D pfam_scan;Pfam:PF00756; E()=2.5E-52;score=177.4;query 172-394;description=Esterase; enterochelin esterase 682812..684026 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760317 YP_005231713.1 CDS STMMW_06521 NC_016854.1 684057 684275 D pfam_scan;Pfam:PF03621; E()=3.5E-19;score=67.6;query1-54;description=MbtH; hypothetical protein 684057..684275 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760318 YP_005231714.1 CDS STMMW_06531 NC_016854.1 684272 688156 D pfam_scan;Pfam:PF00550; E()=2.1E-10;score=40.1;query980-1042;description=PP- binding; pfam_scan;Pfam:PF00975; E()=6.1E-43;score=146.8;query 1068-1284;description=Thioesterase; pfam_scan;Pfam:PF00668; E()=2.0E-53;score=181.3;query 2-300;description=Condensation; pfam_scan;Pfam:PF00501; E()=2.1E-132;score=441.2;query 482-886;description=AMP-binding; enterobactin synthetase component F 684272..688156 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760319 YP_005231715.1 CDS STMMW_06541 NC_016854.1 688406 689542 D pfam_scan;Pfam:PF02706; E()=4.3E-18;score=65.5;query26-155;description=Wzz; tmhmm; query 1-379; ferric enterobactin transport protein 688406..689542 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760320 YP_005231716.1 CDS STMMW_06551 NC_016854.1 689595 690389 R pfam_scan;Pfam:PF00005; E()=5.1E-41;score=140.6;query 33-206;description=ABC_tran; ferric enterobactin transport ATP-binding protein FepC complement(689595..690389) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760321 YP_005231717.1 CDS STMMW_06561 NC_016854.1 690386 691375 R pfam_scan;Pfam:PF01032; E()=2.6E-84;score=282.8;query 20-323;description=FecCD; tmhmm; query 1-330; ferric enterobactin transport protein FepG complement(690386..691375) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760322 YP_005231718.1 CDS STMMW_06571 NC_016854.1 691375 692382 R pfam_scan;Pfam:PF01032; E()=1.0E-91;score=307.1;query 19-328;description=FecCD; tmhmm; query 1-336; ferric enterobactin transport protein FepD complement(691375..692382) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760323 YP_005231719.1 CDS STMMW_06581 NC_016854.1 692493 693737 D pfam_scan;Pfam:PF05977; E()=1.2E-21;score=76.4;query16-396;description=DUF894; tmhmm; query 1-415; membrane protein p43 692493..693737 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760324 YP_005231720.1 CDS STMMW_06591 NC_016854.1 693800 694756 R pfam_scan;Pfam:PF01497; E()=6.1E-32;score=110.2;query 49-297;description=Peripla_BP_2; ferrienterobactin-binding periplasmic protein precursor complement(693800..694756) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760325 YP_005231721.1 CDS STMMW_06601 NC_016854.1 695065 696240 D pfam_scan;Pfam:PF00425; E()=2.5E-69;score=232.7;query 126-380;description=Chorismate_bind; isochorismate synthase EntC 695065..696240 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760326 YP_005231722.1 CDS STMMW_06611 NC_016854.1 696250 697860 D pfam_scan;Pfam:PF00501; E()=4.4E-92;score=308.4;query 50-461;description=AMP-binding; 2,3-dihydroxybenzoate-AMP ligase 696250..697860 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760327 YP_005231723.1 CDS STMMW_06621 NC_016854.1 697874 698731 D pfam_scan;Pfam:PF00550; E()=7.4E-8;score=32.0;query 217-276;description=PP-binding; pfam_scan;Pfam:PF00857; E()=9.8E-40;score=135.4;query 31-204;description=Isochorismatase; isochorismatase 697874..698731 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760328 YP_005231724.1 CDS STMMW_06631 NC_016854.1 698731 699486 D pfam_scan;Pfam:PF00106; E()=4.3E-21;score=75.2;query9-160;description=adh_short; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 698731..699486 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760329 YP_005231725.1 CDS STMMW_06641 NC_016854.1 699489 699902 D pfam_scan;Pfam:PF03061; E()=1.3E-16;score=59.5;query50-127;description=4HBT; hypothetical protein 699489..699902 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760330 YP_005231726.1 CDS STMMW_06651 NC_016854.1 700084 702189 D pfam_scan;Pfam:PF02554; E()=1.1E-170;score=567.1;query 32-436;description=CstA; tmhmm; query 1-702; carbon starvation protein A 700084..702189 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760331 YP_005231727.1 CDS STMMW_06661 NC_016854.1 702253 702450 D pfam_scan;Pfam:PF04328; E()=1.1E-31;score=107.5;query 1-65;description=DUF466; hypothetical protein 702253..702450 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760332 YP_005231728.1 CDS STMMW_06671 NC_016854.1 702486 703574 R pfam_scan;Pfam:PF00465; E()=1.4E-41;score=142.0;query 12-348;description=Fe-ADH; putative oxidoreductase complement(702486..703574) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760333 YP_005231729.1 CDS STMMW_06681 NC_016854.1 703701 704861 D pfam_scan;Pfam:PF00155; E()=1.1E-62;score=211.8;query 32-383;description=Aminotran_1_2; putative aminotransferase 703701..704861 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760334 YP_005231730.1 CDS STMMW_06691 NC_016854.1 704862 705479 R pfam_scan;Pfam:PF02195; E()=2.8E-14;score=52.3;query48-141;description=ParBc; hypothetical protein complement(704862..705479) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760335 YP_005231731.1 CDS STMMW_06701 NC_016854.1 705452 706687 R pfam_scan;Pfam:PF01507; E()=2.5E-15;score=56.2;query30- 234;description=PAPS_reduct; hypothetical protein complement(705452..706687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760336 YP_005231732.1 CDS STMMW_06711 NC_016854.1 706853 707755 R pfam_scan;Pfam:PF00126; E()=3.6E-17;score=61.6;query12-70;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.6E-14;score=51.1;query118- 298;description=LysR_substrate; putative LysR family transcriptional regulator complement(706853..707755) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760337 YP_005231733.1 CDS STMMW_06721 NC_016854.1 708072 708818 R Signal peptide; signalp; query 1-18;cleavage_site_probability=1.000; 1.000; thiol:disulfide interchange protein DsbG precursor complement(708072..708818) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760338 YP_005231734.1 CDS STMMW_06731 NC_016854.1 709259 709822 D pfam_scan;Pfam:PF10417; E()=2.8E-6;score=26.6;query 154-180;description=1-cysPrx_C; pfam_scan;Pfam:PF00578; E()=2.6E-34;score=117.3;query 6-133;description=AhpC-TSA; alkyl hydroperoxide reductase C22 protein 709259..709822 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760339 YP_005231735.1 CDS STMMW_06741 NC_016854.1 710064 711629 D pfam_scan;Pfam:PF07992; E()=1.2E-43;score=149.2;query 214-493;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=2.5E-12;score=46.8;query357-450;description=Pyr_redox; alkyl hydroperoxide reductase F52A protein (subunit F) 710064..711629 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760340 YP_005231736.1 CDS STMMW_06751 NC_016854.1 711961 712521 D pfam_scan;Pfam:PF02613; E()=2.5E-25;score=88.5;query37- 155;description=Nitrate_red_del; hypothetical protein 711961..712521 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760341 YP_005231737.1 CDS STMMW_06761 NC_016854.1 712514 714793 D pfam_scan;Pfam:PF00384; E()=5.0E-50;score=170.2;query 107-535;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=5.7E-9;score=35.3;query 50-104;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=1.3E-18;score=66.1;query633- 724;description=Molydop_binding; tmhmm; query 1-760; molybdopterin-containing oxidoreductase catalytic subunit 712514..714793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760342 YP_005231738.1 CDS STMMW_06771 NC_016854.1 714790 715347 D pfam_scan;Pfam:PF00037; E()=1.8E-4;score=20.3;query 7-22;description=Fer4; molybdopterin-containing oxidoreductase iron-sulfur subunit 714790..715347 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760343 YP_005231739.1 CDS STMMW_06781 NC_016854.1 715347 716114 D pfam_scan;Pfam:PF04976; E()=4.1E-18;score=65.1;query3-188;description=DmsC; tmhmm; query 1-256; molybdopterin-containing oxidoreductase membrane anchor subunit 715347..716114 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760344 YP_005231740.1 CDS STMMW_06791 NC_016854.1 716182 716610 R pfam_scan;Pfam:PF00582; E()=2.6E-25;score=89.3;query1-142;description=Usp; hypothetical protein complement(716182..716610) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760345 YP_005231741.1 CDS STMMW_06801 NC_016854.1 716833 718071 D pfam_scan;Pfam:PF08240; E()=4.8E-30;score=103.0;query 25-151;description=ADH_N; pfam_scan;Pfam:PF00107; E()=5.5E-17;score=61.8;query187- 267;description=ADH_zinc_N; zinc-dependent alcohol dehydrogenase 716833..718071 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760346 YP_005231742.1 CDS STMMW_06811 NC_016854.1 718154 718564 R pfam_scan;Pfam:PF01272; E()=2.4E-20;score=71.8;query49-126;description=GreA_GreB; regulator of nucleoside diphosphate kinase complement(718154..718564) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760347 YP_005231743.1 CDS STMMW_06821 NC_016854.1 718799 719605 R pfam_scan;Pfam:PF00445; E()=4.1E-25;score=87.9;query35- 237;description=Ribonuclease_T2; ribonuclease I precursor complement(718799..719605) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760348 YP_005231744.1 CDS STMMW_06831 NC_016854.1 719715 721178 R pfam_scan;Pfam:PF00939; E()=3.9E-194;score=644.9;query 6-486;description=Na_sulph_symp; tmhmm; query 1-488; citrate carrier complement(719715..721178) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760349 YP_005231745.1 CDS STMMW_06841 NC_016854.1 721216 722112 R pfam_scan;Pfam:PF01874; E()=1.0E-95;score=319.7;query 23-292;description=CitG; citg protein complement(721216..722112) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760350 YP_005231746.1 CDS STMMW_06851 NC_016854.1 722084 722635 R pfam_scan;Pfam:PF03802; E()=1.6E-61;score=206.7;query 12-179;description=CitX; apo-citrate lyase phosphoribosyl-dephospho-coa transferase complement(722084..722635) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760351 YP_005231747.1 CDS STMMW_06861 NC_016854.1 722639 724168 R pfam_scan;Pfam:PF04223; E()=1.2E-266;score=884.0;query 42-507;description=CitF; citrate lyase subunit alpha complement(722639..724168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760352 YP_005231748.1 CDS STMMW_06871 NC_016854.1 724178 725086 R pfam_scan;Pfam:PF03328; E()=2.8E-82;score=275.0;query 15-234;description=HpcH_HpaI; citrate lyase subunit beta complement(724178..725086) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760353 YP_005231749.1 CDS STMMW_06881 NC_016854.1 725083 725379 R pfam_scan;Pfam:PF06857; E()=1.8E-32;score=110.9;query 2-87;description=MdcD; citrate lyase acyl carrier protein complement(725083..725379) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760354 YP_005231750.1 CDS STMMW_06891 NC_016854.1 725376 726452 R pfam_scan;Pfam:PF08218; E()=3.4E-76;score=254.6;query 147-333;description=Citrate_ly_lig; [citrate (pro-3S)-lyase] ligase complement(725376..726452) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760355 YP_005231751.1 CDS STMMW_06901 NC_016854.1 726837 728498 D pfam_scan;Pfam:PF00989; E()=2.2E-5;score=24.2;query 225-278;description=PAS; pfam_scan;Pfam:PF02518; E()=1.6E-21;score=75.7;query429-539;description=HATPase_c; tmhmm; query 1-554; twp component sensor kinase DpiB 726837..728498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760356 YP_005231752.1 CDS STMMW_06911 NC_016854.1 728467 729147 D pfam_scan;Pfam:PF00072; E()=6.4E-19;score=67.7;query8- 117;description=Response_reg; transcriptional regulator 728467..729147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760357 YP_005231753.1 CDS STMMW_06921 NC_016854.1 729201 730454 R pfam_scan;Pfam:PF03606; E()=8.5E-132;score=439.6;query 3-407;description=DcuC; tmhmm; query 1-418; C4-dicarboxylate anaerobic carrier complement(729201..730454) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760358 YP_005231754.1 CDS STMMW_06931 NC_016854.1 730965 731537 D pfam_scan;Pfam:PF07017; E()=3.9E-76;score=253.2;query 41-187;description=PagP; tmhmm; query 1-191; antimicrobial peptide resistance and lipid A acylation protein 730965..731537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760359 YP_005231755.1 CDS STMMW_06941 NC_016854.1 731725 731934 D pfam_scan;Pfam:PF00313; E()=8.4E-34;score=114.5;query 4-68;description=CSD; cold shock-like protein cspE 731725..731934 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760360 YP_005231756.1 CDS STMMW_06951 NC_016854.1 731992 732375 R pfam_scan;Pfam:PF02537; E()=6.7E-30;score=102.7;query 6-118;description=CRCB; tmhmm; query 1-128; hypothetical protein complement(731992..732375) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760361 YP_005231757.1 CDS STMMW_06961 NC_016854.1 732466 733254 D pfam_scan;Pfam:PF00795; E()=5.6E-24;score=84.1;query13- 171;description=CN_hydrolase; hydrolase 732466..733254 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760362 YP_005231758.1 CDS STMMW_06971 NC_016854.1 733383 733586 D pfam_scan;Pfam:PF02416; E()=2.5E-12;score=45.7;query4-50;description=MttA_Hcf106; tmhmm; query 1-68; Sec-independent protein translocase protein 733383..733586 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760363 YP_005231759.1 CDS STMMW_06981 NC_016854.1 733672 734637 R pfam_scan;Pfam:PF04055; E()=1.9E-20;score=73.0;query89- 252;description=Radical_SAM; lipoic acid synthetase complement(733672..734637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760364 YP_005231760.1 CDS STMMW_06991 NC_016854.1 734843 735796 R pfam_scan;Pfam:PF00126; E()=9.0E-14;score=50.8;query31-88;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.8E-19;score=69.2;query116- 317;description=LysR_substrate; LysR family transcriptional regulator complement(734843..735796) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760365 YP_005231761.1 CDS STMMW_07001 NC_016854.1 736098 736673 R pfam_scan;Pfam:PF03099; E()=2.9E-19;score=68.8;query35- 137;description=BPL_LplA_LipB; lipoate-protein ligase B (lipoate biosynthesis protein B) complement(736098..736673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760366 YP_005231762.1 CDS STMMW_07011 NC_016854.1 736839 737102 R pfam_scan;Pfam:PF04359; E()=1.4E-32;score=111.1;query 1-87;description=DUF493; hypothetical protein complement(736839..737102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760367 YP_005231763.1 CDS STMMW_07021 NC_016854.1 737211 738422 R pfam_scan;Pfam:PF00768; E()=1.5E-102;score=341.9;query 38-272;description=Peptidase_S11; pfam_scan;Pfam:PF07943; E()=3.2E-27;score=94.1;query292-383;description=PBP5_C; D-alanine carboxypeptidase complement(737211..738422) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760368 YP_005231764.1 CDS STMMW_07031 NC_016854.1 738562 739707 R pfam_scan;Pfam:PF05036; E()=2.3E-16;score=59.1;query306-377;description=SPOR; pfam_scan;Pfam:PF03330; E()=4.1E-15;score=54.7;query81-168;description=DPBB_1; rare lipoprotein A complement(738562..739707) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760369 YP_005231765.1 CDS STMMW_07041 NC_016854.1 739718 740830 R pfam_scan;Pfam:PF01098; E()=4.0E-124;score=413.7;query 20-364;description=FTSW_RODA_SPOVE; tmhmm; query 1-371; rod shape-determining protein RodA complement(739718..740830) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760370 YP_005231766.1 CDS STMMW_07051 NC_016854.1 740833 742734 R pfam_scan;Pfam:PF00905; E()=3.2E-75;score=252.5;query 272-609;description=Transpeptidase; pfam_scan;Pfam:PF03717; E()=2.1E-44;score=151.1;query 64-239;description=PBP_dimer; tmhmm; query 1-634; penicillin-binding protein complement(740833..742734) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760371 YP_005231767.1 CDS STMMW_07061 NC_016854.1 742765 743232 R pfam_scan;Pfam:PF02590; E()=3.6E-52;score=176.1;query 2-153;description=SPOUT_MTase; hypothetical protein complement(742765..743232) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760372 YP_005231768.1 CDS STMMW_07071 NC_016854.1 743236 743553 R pfam_scan;Pfam:PF02410; E()=7.7E-37;score=125.4;query 8-104;description=DUF143; hypothetical protein complement(743236..743553) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760373 YP_005231769.1 CDS STMMW_07081 NC_016854.1 743882 744490 R pfam_scan;Pfam:PF00300; E()=5.2E-43;score=146.5;query 2-155;description=PGAM; alpha-ribazole-5'-phosphate phosphatase complement(743882..744490) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760374 YP_005231770.1 CDS STMMW_07091 NC_016854.1 744587 745681 D pfam_scan;Pfam:PF00155; E()=9.3E-41;score=139.6;query 26-353;description=Aminotran_1_2; putative aminotransferase CobD 744587..745681 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760375 YP_005231771.1 CDS STMMW_07101 NC_016854.1 745656 746297 R pfam_scan;Pfam:PF01467; E()=2.2E-35;score=121.5;query 7-187;description=CTP_transf_2; hypothetical protein complement(745656..746297) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760376 YP_005231772.1 CDS STMMW_07111 NC_016854.1 746299 747330 R pfam_scan;Pfam:PF06144; E()=1.3E-45;score=154.8;query 21-190;description=DNA_pol3_delta; DNA polymerase III subunit delta complement(746299..747330) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760377 YP_005231773.1 CDS STMMW_07121 NC_016854.1 747330 747920 R pfam_scan;Pfam:PF04390; E()=3.3E-45;score=153.6;query 19-164;description=RplB; rare lipoprotein B complement(747330..747920) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760378 YP_005231774.1 CDS STMMW_07131 NC_016854.1 747935 750517 R pfam_scan;Pfam:PF00133; E()=2.5E-26;score=91.6;query15-171;description=tRNA- synt_1; pfam_scan;Pfam:PF08264; E()=7.1E-20;score=70.9;query699- 822;description=Anticodon_1; leucyl-tRNA synthetase complement(747935..750517) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760379 YP_005231775.1 CDS STMMW_07141 NC_016854.1 750754 751095 D pfam_scan;Pfam:PF08666; E()=4.0E-5;score=23.1;query 30-104;description=SAF; putative hydrolase N-terminus 750754..751095 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760380 YP_005231776.1 CDS STMMW_07151 NC_016854.1 751112 752284 D pfam_scan;Pfam:PF04295; E()=7.5E-152;score=505.2;query 5-389;description=GD_AH_C; putative hydrolase C-terminus 751112..752284 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760381 YP_005231777.1 CDS STMMW_07161 NC_016854.1 752334 753287 D pfam_scan;Pfam:PF03812; E()=6.2E-81;score=271.7;query 1-305;description=KdgT; tmhmm; query 1-318; permease 752334..753287 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760382 YP_005231778.1 CDS STMMW_07171 NC_016854.1 753355 755283 D pfam_scan;Pfam:PF00158; E()=3.0E-68;score=228.5;query 332-498;description=Sigma54_activat; pfam_scan;Pfam:PF06506; E()=3.3E-40;score=137.0;query 30-198;description=PrpR_N; putative sigma-54 dependent transcriptional regulator 753355..755283 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760383 YP_005231779.1 CDS STMMW_07181 NC_016854.1 755376 755849 D pfam_scan;Pfam:PF07295; E()=6.6E-54;score=181.0;query 12-154;description=DUF1451; hypothetical protein 755376..755849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760384 YP_005231780.1 CDS STMMW_07191 NC_016854.1 755888 756883 R Note the TPR repeats and the premature stop codon following codon 68; pfam_scan;Pfam:PF08238; E()=6.5E-6;score=25.6;query 27-63;description=Sel1; hypothetical protein complement(755888..756883) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760385 YP_005231781.1 CDS STMMW_07201 NC_016854.1 757008 757715 D pfam_scan;Pfam:PF06889; E()=1.1E-123;score=410.4;query 1-235;description=DUF1266; hypothetical protein 757008..757715 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760386 YP_005231782.1 CDS STMMW_07211 NC_016854.1 757712 759145 D pfam_scan;Pfam:PF00226; E()=1.6E-5;score=24.2;query 4-47;description=DnaJ; tmhmm; query 1-478; hypothetical protein 757712..759145 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760387 YP_005231783.1 CDS STMMW_07231 NC_016854.1 759850 761322 D pfam_scan;Pfam:PF00226; E()=1.5E-4;score=21.2;query 5-47;description=DnaJ; hypothetical protein 759850..761322 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760389 YP_005231784.1 CDS STMMW_07241 NC_016854.1 761344 763023 R pfam_scan;Pfam:PF00012; E()=2.0E-16;score=58.8;query7-81;description=HSP70; chaperone heat shock protein complement(761344..763023) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760390 YP_005231785.1 CDS STMMW_07251 NC_016854.1 763099 764337 R hypothetical protein complement(763099..764337) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760391 YP_005231786.1 CDS STMMW_07261 NC_016854.1 764369 765304 R pfam_scan;Pfam:PF01156; E()=8.7E-111;score=369.7;query 4-309;description=IU_nuc_hydro; nucleoside hydrolase complement(764369..765304) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760392 YP_005231787.1 CDS STMMW_07271 NC_016854.1 765421 766146 R pfam_scan;Pfam:PF00005; E()=1.4E-48;score=165.3;query 27-197;description=ABC_tran; glutamate/aspartate transport ATP-binding protein GltL complement(765421..766146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760393 YP_005231788.1 CDS STMMW_07281 NC_016854.1 766146 766820 R pfam_scan;Pfam:PF00528; E()=3.9E-17;score=61.9;query34- 223;description=BPD_transp_1; tmhmm; query 1-225; glutamate/aspartate transport system permease GltK complement(766146..766820) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760394 YP_005231789.1 CDS STMMW_07291 NC_016854.1 766820 767560 R pfam_scan;Pfam:PF00528; E()=5.0E-27;score=94.1;query45- 238;description=BPD_transp_1; tmhmm; query 1-247; glutamate/aspartate transport system permease GltJ complement(766820..767560) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760395 YP_005231790.1 CDS STMMW_07301 NC_016854.1 767720 768646 R pfam_scan;Pfam:PF00497; E()=3.7E-50;score=170.5;query 48-277;description=SBP_bac_3; ABC transporter substrate-binding protein complement(767720..768646) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760396 YP_005231791.1 CDS STMMW_07311 NC_016854.1 768983 770521 R pfam_scan;Pfam:PF00795; E()=8.5E-22;score=77.0;query224- 412;description=CN_hydrolase; tmhmm; query 1-513; apolipoprotein N-acyltransferase complement(768983..770521) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760397 YP_005231792.1 CDS STMMW_07321 NC_016854.1 770541 771419 R pfam_scan;Pfam:PF00571; E()=7.7E-22;score=77.3;query73-188;description=CBS; pfam_scan;Pfam:PF03471; E()=2.2E-23;score=81.2;query206-282;description=CorC_HlyC; hemolysin-like protein complement(770541..771419) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760398 YP_005231793.1 CDS STMMW_07331 NC_016854.1 771577 772050 R pfam_scan;Pfam:PF02130; E()=1.9E-45;score=153.5;query 20-144;description=UPF0054; hypothetical protein complement(771577..772050) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760399 YP_005231794.1 CDS STMMW_07341 NC_016854.1 772047 773132 R pfam_scan;Pfam:PF02562; E()=4.8E-105;score=348.9;query 131-334;description=PhoH; PhoH-like ATP-binding protein complement(772047..773132) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760400 YP_005231795.1 CDS STMMW_07351 NC_016854.1 773298 774722 R pfam_scan;Pfam:PF00919; E()=2.8E-29;score=100.4;query 4-104;description=UPF0004; pfam_scan;Pfam:PF04055; E()=8.0E-28;score=97.0;query151- 325;description=Radical_SAM; pfam_scan;Pfam:PF01938; E()=1.4E-18;score=65.7;query378-440;description=TRAM; MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) complement(773298..774722) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760401 YP_005231796.1 CDS STMMW_07361 NC_016854.1 774866 776041 D pfam_scan;Pfam:PF01494; E()=1.6E-30;score=105.8;query 6-339;description=FAD_binding_3; tmhmm; query 1-392; putative monooxygenase 774866..776041 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760402 YP_005231797.1 CDS STMMW_07371 NC_016854.1 776108 776683 R tmhmm; query 1-192; hypothetical protein complement(776108..776683) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760403 YP_005231798.1 CDS STMMW_07381 NC_016854.1 777750 779414 R pfam_scan;Pfam:PF00733; E()=1.6E-77;score=260.1;query 212-450;description=Asn_synthase; asparagine synthetase B complement(777750..779414) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760404 YP_005231799.1 CDS STMMW_07391 NC_016854.1 779704 780456 R pfam_scan;Pfam:PF00702; E()=7.3E-14;score=52.0;query3-223;description=Hydrolase; NagD protein complement(779704..780456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760405 YP_005231800.1 CDS STMMW_07401 NC_016854.1 780503 781723 R pfam_scan;Pfam:PF00480; E()=2.3E-57;score=193.4;query 90-274;description=ROK; pfam_scan;Pfam:PF01047; E()=2.2E-7;score=30.1;query 24-63;description=MarR; N-acetylglucosamine repressor complement(780503..781723) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760406 YP_005231801.1 CDS STMMW_07411 NC_016854.1 781728 782882 R pfam_scan;Pfam:PF01979; E()=1.3E-33;score=116.7;query 50-363;description=Amidohydro_1; N-acetylglucosamine-6-phosphate deacetylase complement(781728..782882) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760407 YP_005231802.1 CDS STMMW_07421 NC_016854.1 782942 783742 R pfam_scan;Pfam:PF01182; E()=1.7E-138;score=459.1;query 15-250;description=Glucosamine_iso; glucosamine-6-phosphate deaminase complement(782942..783742) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760408 YP_005231803.1 CDS STMMW_07431 NC_016854.1 784069 786021 D pfam_scan;Pfam:PF00358; E()=2.3E-52;score=175.6;query 500-628;description=PTS_EIIA_1; pfam_scan;Pfam:PF00367; E()=1.8E-12;score=45.9;query393-427;description=PTS_EIIB; pfam_scan;Pfam:PF02378; E()=4.3E-75;score=252.3;query 12-300;description=PTS_EIIC; tmhmm; query 1-651; PTS system, N-acetylglucosamine-specific IIABC component 784069..786021 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760409 YP_005231804.1 CDS STMMW_07441 NC_016854.1 786232 787899 D pfam_scan;Pfam:PF00749; E()=1.1E-121;score=405.0;query 28-337;description=tRNA-synt_1c; pfam_scan;Pfam:PF03950; E()=1.5E-71;score=239.8;query 340-529;description=tRNA-synt_1c_C; glutaminyl-tRNA synthetase 786232..787899 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760410 YP_005231805.1 CDS STMMW_07451 NC_016854.1 788345 789751 D pfam_scan;Pfam:PF03573; E()=1.5E-25;score=89.1;query9-432;description=OprD; tmhmm; query 1-469; putative outer membrane protein 788345..789751 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760411 YP_005231806.1 CDS STMMW_07461 NC_016854.1 789801 790133 D Signal peptide; signalp; query 1-19;cleavage_site_probability=0.944; 0.999; putative lipoprotein 789801..790133 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760412 YP_005231807.1 CDS STMMW_07471 NC_016854.1 790182 791486 R pfam_scan;Pfam:PF00083; E()=3.1E-60;score=203.6;query 23-398;description=Sugar_tr; tmhmm; query 1-435; citrate-proton symporter complement(790182..791486) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760413 YP_005231808.1 CDS STMMW_07481 NC_016854.1 791537 792676 R tmhmm; query 1-380; citrate utilization protein B complement(791537..792676) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760414 YP_005231809.1 CDS STMMW_07491 NC_016854.1 792663 794066 R pfam_scan;Pfam:PF00890; E()=9.0E-34;score=116.5;query 3-431;description=FAD_binding_2; hypothetical protein complement(792663..794066) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760415 YP_005231810.1 CDS STMMW_07501 NC_016854.1 794164 795090 R pfam_scan;Pfam:PF00126; E()=5.1E-18;score=64.3;query3-61;description=HTH_1; pfam_scan;Pfam:PF03466; E()=7.4E-37;score=126.1;query 86-287;description=LysR_substrate; LysR family transcriptional regulator complement(794164..795090) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760416 YP_005231811.1 CDS STMMW_07511 NC_016854.1 795205 795657 R pfam_scan;Pfam:PF01475; E()=4.7E-50;score=168.0;query 10-130;description=FUR; ferric uptake regulation protein complement(795205..795657) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760417 YP_005231812.1 CDS STMMW_07521 NC_016854.1 795939 796469 R pfam_scan;Pfam:PF00258; E()=2.6E-30;score=105.1;query 6-160;description=Flavodoxin_1; flavodoxin 1 complement(795939..796469) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760418 YP_005231813.1 CDS STMMW_07531 NC_016854.1 796632 796913 R pfam_scan;Pfam:PF01402; E()=1.9E-7;score=30.3;query 52-87;description=RHH_1; hypothetical protein complement(796632..796913) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760419 YP_005231814.1 CDS STMMW_07541 NC_016854.1 797047 797817 R pfam_scan;Pfam:PF00561; E()=2.3E-14;score=53.1;query43- 183;description=Abhydrolase_1; putative esterase/lipase YbfF complement(797047..797817) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760420 YP_005231815.1 CDS STMMW_07551 NC_016854.1 798002 798544 D pfam_scan;Pfam:PF03925; E()=1.2E-74;score=249.7;query 1-180;description=SeqA; seqA protein 798002..798544 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760421 YP_005231816.1 CDS STMMW_07561 NC_016854.1 798614 800209 D pfam_scan;Pfam:PF00408; E()=1.6E-7;score=30.8;query 476-524;description=PGM_PMM_IV; pfam_scan;Pfam:PF02880; E()=3.6E-29;score=100.6;query 305-424;description=PGM_PMM_III; pfam_scan;Pfam:PF02878; E()=1.6E-31;score=108.4;query 26-164;description=PGM_PMM_I; pfam_scan;Pfam:PF02879; E()=3.6E-13;score=49.2;query195- 302;description=PGM_PMM_II; phosphoglucomutase 798614..800209 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760422 YP_005231817.1 CDS STMMW_07571 NC_016854.1 800324 800809 R pfam_scan;Pfam:PF01243; E()=4.0E-6;score=26.2;query 13-80;description=Pyridox_oxidase; 5-nitroimidazole antibiotic resistance complement(800324..800809) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760423 YP_005231818.1 CDS STMMW_07581 NC_016854.1 800874 802193 R pfam_scan;Pfam:PF00324; E()=1.3E-24;score=86.0;query16- 403;description=AA_permease; tmhmm; query 1-440; putrescine-ornithine antiporter complement(800874..802193) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760424 YP_005231819.1 CDS STMMW_07591 NC_016854.1 802190 804388 R pfam_scan;Pfam:PF03711; E()=2.1E-53;score=179.4;query 576-707;description=OKR_DC_1_C; pfam_scan;Pfam:PF01276; E()=3.2E-196;score=651.9;query 109-551;description=OKR_DC_1; pfam_scan;Pfam:PF03709; E()=2.9E-26;score=91.1;query4-103;description=OKR_DC_1_N; ornithine decarboxylase, inducible complement(802190..804388) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760425 YP_005231820.1 CDS STMMW_07601 NC_016854.1 805150 805827 R pfam_scan;Pfam:PF00486; E()=3.8E-20;score=70.7;query148- 223;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=1.0E-31;score=108.9;query 4-113;description=Response_reg; KDP operon transcriptional regulatory protein complement(805150..805827) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760426 YP_005231821.1 CDS STMMW_07611 NC_016854.1 805824 808508 R pfam_scan;Pfam:PF00582; E()=1.1E-6;score=29.0;query 251-365;description=Usp; pfam_scan;Pfam:PF02518; E()=2.9E-29;score=100.6;query 776-881;description=HATPase_c; pfam_scan;Pfam:PF02702; E()=1.7E-98;score=327.9;query 21-230;description=KdpD; pfam_scan;Pfam:PF00512; E()=9.0E-13;score=47.5;query664-730;description=HisKA; tmhmm; query 1-895; sensor protein KdpD complement(805824..808508) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760427 YP_005231822.1 CDS STMMW_07621 NC_016854.1 808505 809089 R pfam_scan;Pfam:PF02669; E()=1.3E-86;score=288.4;query 3-187;description=KdpC; tmhmm; query 1-195; potassium-transporting ATPase C chain complement(808505..809089) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760428 YP_005231823.1 CDS STMMW_07631 NC_016854.1 809098 811146 R pfam_scan;Pfam:PF00702; E()=3.0E-33;score=115.2;query 301-539;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=1.5E-40;score=138.6;query 72-297;description=E1-E2_ATPase; potassium-transporting ATPase B chain complement(809098..811146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760429 YP_005231824.1 CDS STMMW_07641 NC_016854.1 811167 812846 R pfam_scan;Pfam:PF03814; E()=2.5E-245;score=814.5;query 8-557;description=KdpA; tmhmm; query 1-560; potassium-transporting ATPase A chain complement(811167..812846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760430 YP_005231825.1 CDS STMMW_07651 NC_016854.1 813272 813478 D pfam_scan;Pfam:PF10725; E()=1.4E-35;score=120.2;query 4-64;description=DUF2517; tmhmm; query 1-69; hypothetical protein 813272..813478 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760431 YP_005231826.1 CDS STMMW_07661 NC_016854.1 813589 815010 D pfam_scan;Pfam:PF00875; E()=1.3E-45;score=154.6;query 5-173;description=DNA_photolyase; pfam_scan;Pfam:PF03441; E()=4.7E-109;score=363.1;query 206-469;description=FAD_binding_7; deoxyribodipyrimidine photolyase 813589..815010 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760432 YP_005231827.1 CDS STMMW_07671 NC_016854.1 815049 816530 R pfam_scan;Pfam:PF00854; E()=6.2E-80;score=268.9;query 77-424;description=PTR2; tmhmm; query 1-494; PTR2 family transport protein complement(815049..816530) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760433 YP_005231828.1 CDS STMMW_07681 NC_016854.1 816859 817602 D pfam_scan;Pfam:PF01784; E()=3.6E-62;score=209.1;query 5-234;description=NIF3; hypothetical protein 816859..817602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760434 YP_005231829.1 CDS STMMW_07691 NC_016854.1 817618 818274 D pfam_scan;Pfam:PF02682; E()=1.6E-72;score=242.8;query 5-202;description=AHS1; hypothetical protein 817618..818274 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760435 YP_005231830.1 CDS STMMW_07701 NC_016854.1 818268 819200 D pfam_scan;Pfam:PF02626; E()=1.3E-100;score=335.4;query 24-288;description=AHS2; hypothetical protein 818268..819200 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760436 YP_005231831.1 CDS STMMW_07711 NC_016854.1 819190 819924 D pfam_scan;Pfam:PF03746; E()=4.3E-98;score=326.8;query 2-236;description=LamB_YcsF; hypothetical protein 819190..819924 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760437 YP_005231832.1 CDS STMMW_07721 NC_016854.1 820248 820379 D similar to hypothetical proteins; hypothetical protein 820248..820379 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760438 YP_005231833.1 CDS STMMW_07731 NC_016854.1 820439 821005 D similar to a protein necessary for phase variation of type I fimbrae in E. coli; pfam_scan;Pfam:PF00589; E()=1.4E-33;score=115.8;query 19-177;description=Phage_integrase; putative type 1 fimbriae regulatory protein 820439..821005 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760439 YP_005231834.1 CDS STMMW_07741 NC_016854.1 821465 821800 D contains a LysR Domain; tmhmm; query 1-112; hypothetical protein 821465..821800 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760440 YP_005231835.1 CDS STMMW_07751 NC_016854.1 821802 822542 D transmembrane and major transport facilitator domain; putative transport protein 821802..822542 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760441 YP_005231836.1 CDS STMMW_07761 NC_016854.1 822828 823979 D similar to a udp-galactopyranose mutase; pfam_scan;Pfam:PF01266; E()=5.4E-6;score=25.7;query 5-42;description=DAO; pfam_scan;Pfam:PF03275; E()=1.2E-78;score=263.3;query 150-349;description=GLF; putative UDP-galactopyranose mutase 822828..823979 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760442 YP_005231837.1 CDS STMMW_07771 NC_016854.1 823976 824872 D pfam_scan;Pfam:PF00535; E()=6.6E-16;score=57.8;query6- 177;description=Glycos_transf_2; putative glycosyl transferase 823976..824872 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760443 YP_005231838.1 CDS STMMW_07781 NC_016854.1 824885 826018 D pfam_scan;Pfam:PF00534; E()=6.4E-38;score=129.6;query 183-353;description=Glycos_transf_1; galactosyltransferase 824885..826018 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760444 YP_005231839.1 CDS STMMW_07791 NC_016854.1 826147 826917 D pfam_scan;Pfam:PF01061; E()=5.1E-16;score=58.4;query13- 215;description=ABC2_membrane; tmhmm; query 1-257; O-antigen export system, permease protein 826147..826917 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760445 YP_005231840.1 CDS STMMW_07801 NC_016854.1 826921 827631 D pfam_scan;Pfam:PF00005; E()=9.5E-21;score=74.3;query58-213;description=ABC_tran; ABC transporter domain-containing protein 826921..827631 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760446 YP_005231841.1 CDS STMMW_07811 NC_016854.1 827725 829503 D pfam_scan;Pfam:PF00535; E()=1.2E-6;score=27.7;query 150-247;description=Glycos_transf_2; putative glycosyltransferase, cell wall biogenesis 827725..829503 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760447 YP_005231842.1 CDS STMMW_07821 NC_016854.1 829696 830529 D pfam_scan;Pfam:PF00535; E()=1.7E-6;score=27.2;query 74-118;description=Glycos_transf_2; putative glycosyltransferase, cell wall biogenesis 829696..830529 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760448 YP_005231843.1 CDS STMMW_07831 NC_016854.1 830587 832686 D note the differing C-terminal region compared to close database hits; putative glycosyl transferase 830587..832686 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760449 YP_005231844.1 CDS STMMW_07851 NC_016854.1 832735 833526 D pfam_scan;Pfam:PF06827; E()=3.3E-8;score=32.5;query 235-263;description=zf-FPG_IleRS; pfam_scan;Pfam:PF01149; E()=1.6E-14;score=53.4;query2- 105;description=Fapy_DNA_glyco; pfam_scan;Pfam:PF06831; E()=9.3E-16;score=56.9;query126-205;description=H2TH; endonuclease VIII, DNA N-glycosylase with an AP lyase activity 832735..833526 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760450 YP_005231845.1 CDS STMMW_07861 NC_016854.1 833581 834543 R pfam_scan;Pfam:PF05145; E()=2.0E-102;score=342.3;query 2-315;description=AmoA; tmhmm; query 1-321; hypothetical protein complement(833581..834543) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760451 YP_005231846.1 CDS STMMW_07871 NC_016854.1 834764 836047 R pfam_scan;Pfam:PF00285; E()=2.4E-137;score=457.4;query 46-409;description=Citrate_synt; citrate synthase complement(834764..836047) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760452 YP_005231847.1 CDS STMMW_07881 NC_016854.1 836022 836393 D hypothetical protein 836022..836393 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760453 YP_005231848.1 CDS STMMW_07891 NC_016854.1 836802 837191 D pfam_scan;Pfam:PF01127; E()=2.0E-30;score=105.0;query 6-123;description=Sdh_cyt; tmhmm; query 1-130; succinate dehydrogenase cytochrome b-556 subunit 836802..837191 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760454 YP_005231849.1 CDS STMMW_07901 NC_016854.1 837185 837532 D pfam_scan;Pfam:PF01127; E()=8.1E-14;score=51.4;query9-104;description=Sdh_cyt; tmhmm; query 1-116; succinate dehydrogenase hydrophobic membrane anchor protein 837185..837532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760455 YP_005231850.1 CDS STMMW_07911 NC_016854.1 837532 839298 D pfam_scan;Pfam:PF02910; E()=7.0E-41;score=138.8;query 460-588;description=Succ_DH_flav_C; pfam_scan;Pfam:PF00890; E()=5.3E-128;score=426.8;query 9-405;description=FAD_binding_2; succinate dehydrogenase flavoprotein subunit 837532..839298 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760456 YP_005231851.1 CDS STMMW_07921 NC_016854.1 839312 840031 D succinate dehydrogenase iron-sulfur protein 839312..840031 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760457 YP_005231852.1 CDS STMMW_07931 NC_016854.1 840555 843356 D pfam_scan;Pfam:PF02779; E()=7.4E-48;score=161.8;query 592-783;description=Transket_pyr; pfam_scan;Pfam:PF00676; E()=1.0E-37;score=129.5;query 250-512;description=E1_dh; 2-oxoglutarate dehydrogenase E1 component 840555..843356 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760458 YP_005231853.1 CDS STMMW_07941 NC_016854.1 843371 844579 D pfam_scan;Pfam:PF02817; E()=6.5E-13;score=47.2;query114- 148;description=E3_binding; pfam_scan;Pfam:PF00364; E()=1.3E-16;score=59.8;query5- 76;description=Biotin_lipoyl; pfam_scan;Pfam:PF00198; E()=2.1E-85;score=285.2;query 172-400;description=2-oxoacid_dh; dihydrolipoamide succinyltransferase component (E2) 843371..844579 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760459 YP_005231854.1 CDS STMMW_07951 NC_016854.1 844721 845887 D pfam_scan;Pfam:PF08442; E()=1.0E-82;score=276.3;query 2-203;description=ATP-grasp_2; pfam_scan;Pfam:PF00549; E()=5.4E-34;score=116.6;query 262-382;description=Ligase_CoA; succinyl-CoA synthetase beta chain 844721..845887 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760460 YP_005231855.1 CDS STMMW_07961 NC_016854.1 845887 846756 D pfam_scan;Pfam:PF02629; E()=6.5E-36;score=122.2;query 6-99;description=CoA_binding; pfam_scan;Pfam:PF00549; E()=5.6E-25;score=87.4;query151- 271;description=Ligase_CoA; succinyl-CoA synthetase alpha chain 845887..846756 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760461 YP_005231856.1 CDS STMMW_07971 NC_016854.1 848339 849907 D pfam_scan;Pfam:PF01654; E()=1.0E-180;score=600.5;query 7-502;description=Bac_Ubq_Cox; tmhmm; query 1-523; cytochrome D ubiquinol oxidase subunit I 848339..849907 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760462 YP_005231857.1 CDS STMMW_07981 NC_016854.1 849923 851062 D pfam_scan;Pfam:PF02322; E()=5.4E-124;score=413.3;query 7-362;description=Cyto_ox_2; tmhmm; query 1-380; cytochrome D ubiquinol oxidase subunit II 849923..851062 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760463 YP_005231858.1 CDS STMMW_07991 NC_016854.1 851077 851190 D pfam_scan;Pfam:PF08173; E()=2.1E-14;score=52.5;query1-28;description=YbgT_YccB; tmhmm; query 1-38; hypothetical protein 851077..851190 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760464 YP_005231859.1 CDS STMMW_08001 NC_016854.1 851327 851608 D pfam_scan;Pfam:PF09600; E()=2.9E-31;score=106.5;query 12-92;description=Cyd_oper_YbgE; tmhmm; query 1-94; hypothetical protein 851327..851608 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760465 YP_005231860.1 CDS STMMW_08011 NC_016854.1 851837 852241 D pfam_scan;Pfam:PF03061; E()=3.2E-16;score=58.2;query20-103;description=4HBT; hypothetical protein 851837..852241 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760466 YP_005231861.1 CDS STMMW_08021 NC_016854.1 852238 852930 D pfam_scan;Pfam:PF01618; E()=1.0E-46;score=157.7;query 74-210;description=MotA_ExbB; tmhmm; query 1-231; TolQ protein 852238..852930 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760467 YP_005231862.1 CDS STMMW_08031 NC_016854.1 852934 853362 D pfam_scan;Pfam:PF02472; E()=3.1E-29;score=101.5;query 9-141;description=ExbD; tmhmm; query 1-143; tolR protein 852934..853362 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760468 YP_005231863.1 CDS STMMW_08041 NC_016854.1 853427 854650 D pfam_scan;Pfam:PF06519; E()=1.1E-37;score=127.5;query 312-405;description=TolA; tmhmm; query 1-408; TolA protein 853427..854650 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760469 YP_005231864.1 CDS STMMW_08051 NC_016854.1 854774 856066 D pfam_scan;Pfam:PF04052; E()=3.4E-39;score=133.0;query 10-121;description=TolB_N; pfam_scan;Pfam:PF07676; E()=2.7E-6;score=26.2;query 200-225;description=PD40; tolB protein precursor 854774..856066 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760470 YP_005231865.1 CDS STMMW_08061 NC_016854.1 856101 856625 D pfam_scan;Pfam:PF00691; E()=1.5E-22;score=79.2;query73-168;description=OmpA; peptidoglycan-associated lipoprotein 856101..856625 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760471 YP_005231866.1 CDS STMMW_08071 NC_016854.1 856635 857423 D Signal peptide; signalp; query 1-27;cleavage_site_probability=0.992; 1.000; hypothetical protein 856635..857423 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760472 YP_005231867.1 CDS STMMW_08081 NC_016854.1 858887 859930 D pfam_scan;Pfam:PF02445; E()=3.6E-105;score=350.8;query 31-340;description=NadA; quinolinate synthetase A protein 858887..859930 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760473 YP_005231868.1 CDS STMMW_08091 NC_016854.1 859955 860674 D pfam_scan;Pfam:PF04973; E()=1.3E-25;score=89.6;query23- 125;description=NMN_transporter; tmhmm; query 1-240; pnuC protein 859955..860674 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760474 YP_005231869.1 CDS STMMW_08101 NC_016854.1 860671 861609 R pfam_scan;Pfam:PF01545; E()=6.8E-78;score=261.3;query 21-292;description=Cation_efflux; tmhmm; query 1-313; cation transport protein complement(860671..861609) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760475 YP_005231870.1 CDS STMMW_08111 NC_016854.1 861719 862105 R Signal peptide; signalp; query 1-25;cleavage_site_probability=0.999; 1.000; hypothetical protein complement(861719..862105) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760476 YP_005231871.1 CDS STMMW_08121 NC_016854.1 862425 863477 D pfam_scan;Pfam:PF00793; E()=1.7E-101;score=338.0;query 41-338;description=DAHP_synth_1; phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthetase) phenylalanine repressible 862425..863477 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760477 YP_005231872.1 CDS STMMW_08131 NC_016854.1 863571 864116 R pfam_scan;Pfam:PF05683; E()=1.5E-51;score=173.8;query 6-174;description=Fumerase_C; putative hydro-lyase complement(863571..864116) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760478 YP_005231873.1 CDS STMMW_08141 NC_016854.1 864131 864976 R pfam_scan;Pfam:PF05681; E()=3.3E-107;score=357.1;query 12-278;description=Fumerase; putative hydro-lyase complement(864131..864976) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760479 YP_005231874.1 CDS STMMW_08151 NC_016854.1 865145 865996 D pfam_scan;Pfam:PF00126; E()=4.2E-13;score=48.6;query3-48;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.1E-40;score=136.7;query 74-274;description=LysR_substrate; LysR family transcriptional regulator 865145..865996 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760480 YP_005231875.1 CDS STMMW_08161 NC_016854.1 865997 866980 R pfam_scan;Pfam:PF00126; E()=2.2E-16;score=59.1;query30-87;description=HTH_1; pfam_scan;Pfam:PF03466; E()=9.4E-14;score=50.6;query114- 325;description=LysR_substrate; LysR family transcriptional regulator complement(865997..866980) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760481 YP_005231876.1 CDS STMMW_08171 NC_016854.1 867203 868471 D pfam_scan;Pfam:PF03600; E()=1.0E-17;score=63.7;query8-271;description=CitMHS; tmhmm; query 1-423; putative cation transporter 867203..868471 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760482 YP_005231877.1 CDS STMMW_08181 NC_016854.1 868521 868766 D pfam_scan;Pfam:PF04277; E()=6.0E-24;score=83.9;query7-78;description=OAD_gamma; tmhmm; query 1-82; oxaloacetate decarboxylase gamma chain 868521..868766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760483 YP_005231878.1 CDS STMMW_08191 NC_016854.1 868782 870557 D pfam_scan;Pfam:PF00682; E()=4.1E-51;score=173.8;query 11-250;description=HMGL-like; pfam_scan;Pfam:PF00364; E()=1.4E-19;score=69.3;query525- 590;description=Biotin_lipoyl; pfam_scan;Pfam:PF02436; E()=2.9E-64;score=216.3;query 290-492;description=PYC_OADA; oxaloacetate decarboxylase alpha chain 868782..870557 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760484 YP_005231879.1 CDS STMMW_08201 NC_016854.1 870570 871871 D pfam_scan;Pfam:PF03977; E()=1.3E-173;score=577.1;query 19-430;description=OAD_beta; tmhmm; query 1-434; oxaloacetate decarboxylase beta chain 870570..871871 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760485 YP_005231880.1 CDS STMMW_08211 NC_016854.1 871990 872688 D pfam_scan;Pfam:PF01874; E()=9.6E-7;score=28.0;query 118-222;description=CitG; hypothetical protein 871990..872688 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760486 YP_005231881.1 CDS STMMW_08221 NC_016854.1 873068 874147 D pfam_scan;Pfam:PF01032; E()=9.0E-87;score=290.8;query 40-354;description=FecCD; tmhmm; query 1-360; ABC transporter permease (FecCD_family) 873068..874147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760487 YP_005231882.1 CDS STMMW_08231 NC_016854.1 874147 874923 D pfam_scan;Pfam:PF00005; E()=2.9E-39;score=134.8;query 30-198;description=ABC_tran; ABC transporter ATP-binding protein 874147..874923 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760488 YP_005231883.1 CDS STMMW_08241 NC_016854.1 875014 875766 R pfam_scan;Pfam:PF00300; E()=8.0E-36;score=123.1;query 5-191;description=PGAM; phosphoglycerate mutase complement(875014..875766) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760489 YP_005231884.1 CDS STMMW_08251 NC_016854.1 875990 877030 R pfam_scan;Pfam:PF01263; E()=3.6E-95;score=318.2;query 17-342;description=Aldose_epim; aldose 1-epimerase (mutarotase) complement(875990..877030) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760490 YP_005231885.1 CDS STMMW_08261 NC_016854.1 877024 878172 R pfam_scan;Pfam:PF08544; E()=5.7E-13;score=48.5;query279- 361;description=GHMP_kinases_C; pfam_scan;Pfam:PF00288; E()=1.7E-14;score=53.0;query115- 181;description=GHMP_kinases_N; pfam_scan;Pfam:PF10509; E()=3.1E-23;score=79.9;query9- 59;description=GalKase_gal_bdg; galactokinase complement(877024..878172) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760491 YP_005231886.1 CDS STMMW_08271 NC_016854.1 878175 879221 R pfam_scan;Pfam:PF02744; E()=6.0E-73;score=243.3;query 183-345;description=GalP_UDP_tr_C; pfam_scan;Pfam:PF01087; E()=1.6E-75;score=252.3;query 3-176;description=GalP_UDP_transf; galactose-1-phosphate uridylyltransferase complement(878175..879221) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760492 YP_005231887.1 CDS STMMW_08281 NC_016854.1 879232 880248 R pfam_scan;Pfam:PF01370; E()=7.2E-61;score=205.2;query 3-262;description=Epimerase; UDP-glucose 4-epimerase complement(879232..880248) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760493 YP_005231888.1 CDS STMMW_08291 NC_016854.1 880471 881379 R pfam_scan;Pfam:PF09935; E()=5.9E-102;score=340.1;query 13-290;description=DUF2167; tmhmm; query 1-303; hypothetical protein complement(880471..881379) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760494 YP_005231889.1 CDS STMMW_08301 NC_016854.1 881550 883025 R pfam_scan;Pfam:PF00005; E()=1.3E-23;score=83.7;query30-191;description=ABC_tran; putative molybdenum transport ATP-binding protein ModF (photorepair protein PhrA) complement(881550..883025) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760495 YP_005231890.1 CDS STMMW_08311 NC_016854.1 883093 883881 R pfam_scan;Pfam:PF03459; E()=2.6E-13;score=49.8;query125-188;description=TOBE; pfam_scan;Pfam:PF00126; E()=5.3E-6;score=26.0;query 20-83;description=HTH_1; putative molybdenum transport protein ModE complement(883093..883881) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760496 YP_005231891.1 CDS STMMW_08321 NC_016854.1 883908 884159 D pfam_scan;Pfam:PF10766; E()=5.8E-24;score=82.8;query38-78;description=DUF2592; tmhmm; query 1-84; hypothetical protein 883908..884159 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760497 YP_005231892.1 CDS STMMW_08331 NC_016854.1 884326 885099 D pfam_scan;Pfam:PF01547; E()=7.9E-23;score=81.1;query34-245;description=SBP_bac_1; molybdate-binding periplasmic protein 884326..885099 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760498 YP_005231893.1 CDS STMMW_08341 NC_016854.1 885099 885788 D pfam_scan;Pfam:PF00528; E()=2.3E-19;score=69.2;query26- 220;description=BPD_transp_1; tmhmm; query 1-230; molybdenum transport system permease protein ModB 885099..885788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760499 YP_005231894.1 CDS STMMW_08351 NC_016854.1 885791 886849 D pfam_scan;Pfam:PF03459; E()=2.1E-14;score=53.3;query290-350;description=TOBE; pfam_scan;Pfam:PF00005; E()=9.3E-47;score=159.3;query 26-190;description=ABC_tran; molybdenum transport ATP-binding protein ModC 885791..886849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760500 YP_005231895.1 CDS STMMW_08361 NC_016854.1 886850 887668 R pfam_scan;Pfam:PF08282; E()=1.7E-67;score=227.3;query 6-267;description=Hydrolase_3; hypothetical protein complement(886850..887668) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760501 YP_005231896.1 CDS STMMW_08371 NC_016854.1 887832 888827 D pfam_scan;Pfam:PF10282; E()=6.3E-89;score=298.2;query 6-327;description=DUF2394; hypothetical protein 887832..888827 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760502 YP_005231897.1 CDS STMMW_08381 NC_016854.1 888971 890254 R pfam_scan;Pfam:PF01095; E()=7.7E-12;score=44.2;query194- 339;description=Pectinesterase; pectinesterase precursor complement(888971..890254) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760503 YP_005231898.1 CDS STMMW_08391 NC_016854.1 890492 891715 D pfam_scan;Pfam:PF01979; E()=3.8E-7;score=29.8;query 329-381;description=Amidohydro_1; imidazolonepropionase 890492..891715 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760504 YP_005231899.1 CDS STMMW_08401 NC_016854.1 891712 892653 D pfam_scan;Pfam:PF00491; E()=5.1E-51;score=173.1;query 45-308;description=Arginase; formiminoglutamase 891712..892653 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760505 YP_005231900.1 CDS STMMW_08411 NC_016854.1 892746 893423 D pfam_scan;Pfam:PF00392; E()=3.8E-18;score=64.8;query1-60;description=GntR; pfam_scan;Pfam:PF07702; E()=3.1E-34;score=117.5;query 82-218;description=UTRA; histidine utilization repressor 892746..893423 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760506 YP_005231901.1 CDS STMMW_08421 NC_016854.1 893620 895305 D pfam_scan;Pfam:PF01175; E()=7.7E-292;score=968.0;query 11-554;description=Urocanase; urocanate hydratase 893620..895305 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760507 YP_005231902.1 CDS STMMW_08431 NC_016854.1 895307 896827 D pfam_scan;Pfam:PF00221; E()=7.3E-205;score=680.4;query 5-477;description=PAL; histidine ammonia-lyase 895307..896827 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760508 YP_005231903.1 CDS STMMW_08441 NC_016854.1 896912 897388 R pfam_scan;Pfam:PF01161; E()=5.8E-40;score=135.9;query 14-157;description=PBP; hypothetical protein complement(896912..897388) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760509 YP_005231904.1 CDS STMMW_08451 NC_016854.1 897446 898735 R pfam_scan;Pfam:PF00202; E()=7.2E-112;score=373.1;query 29-371;description=Aminotran_3; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(897446..898735) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760510 YP_005231905.1 CDS STMMW_08461 NC_016854.1 898822 899862 D pfam_scan;Pfam:PF06968; E()=1.9E-29;score=100.9;query 220-312;description=BATS; pfam_scan;Pfam:PF04055; E()=3.0E-25;score=88.6;query48- 204;description=Radical_SAM; biotin synthetase 898822..899862 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760511 YP_005231906.1 CDS STMMW_08471 NC_016854.1 899859 901016 D pfam_scan;Pfam:PF00155; E()=6.2E-64;score=215.9;query 40-380;description=Aminotran_1_2; 8-amino-7-oxononanoate synthase 899859..901016 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760512 YP_005231907.1 CDS STMMW_08481 NC_016854.1 901000 901755 D pfam_scan;Pfam:PF08241; E()=5.0E-25;score=87.2;query47- 138;description=Methyltransf_11; biotin synthesis protein BioC 901000..901755 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760513 YP_005231908.1 CDS STMMW_08491 NC_016854.1 901748 902434 D pfam_scan;Pfam:PF01656; E()=7.8E-21;score=74.6;query6-206;description=CbiA; dethiobiotin synthetase 901748..902434 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760514 YP_005231909.1 CDS STMMW_08501 NC_016854.1 903085 905106 D pfam_scan;Pfam:PF02151; E()=1.6E-7;score=30.4;query 634-667;description=UVR; pfam_scan;Pfam:PF04851; E()=4.6E-10;score=39.2;query14-84;description=ResIII; pfam_scan;Pfam:PF00271; E()=3.2E-15;score=54.9;query465- 545;description=Helicase_C; excision nuclease ABC subunit B 903085..905106 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760515 YP_005231910.1 CDS STMMW_08511 NC_016854.1 905415 905588 D putative cytoplasmic protein 905415..905588 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760516 YP_005231911.1 CDS STMMW_08521 NC_016854.1 905596 907893 D pfam_scan;Pfam:PF00560; E()=6.9;score=7.4;query 201-220;description=LRR_1; leucine rich repeat 905596..907893 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760517 YP_005231912.1 CDS STMMW_08531 NC_016854.1 907985 908893 R pfam_scan;Pfam:PF01933; E()=9.1E-89;score=297.5;query 12-299;description=UPF0052; hypothetical protein complement(907985..908893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760518 YP_005231913.1 CDS STMMW_08541 NC_016854.1 909290 910279 D pfam_scan;Pfam:PF04055; E()=2.8E-34;score=118.0;query 19-180;description=Radical_SAM; pfam_scan;Pfam:PF06463; E()=1.6E-38;score=131.1;query 186-312;description=Mob_synth_C; molybdenum cofactor biosynthesis protein A 909290..910279 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760519 YP_005231914.1 CDS STMMW_08551 NC_016854.1 910301 910813 D pfam_scan;Pfam:PF00994; E()=6.9E-29;score=100.3;query 14-156;description=MoCF_biosynth; molybdenum cofactor biosynthesis protein B 910301..910813 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760520 YP_005231915.1 CDS STMMW_08561 NC_016854.1 910816 911301 D pfam_scan;Pfam:PF01967; E()=1.9E-60;score=202.3;query 15-150;description=MoaC; molybdenum cofactor biosynthesis protein C 910816..911301 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760521 YP_005231916.1 CDS STMMW_08571 NC_016854.1 911288 911539 D pfam_scan;Pfam:PF02597; E()=4.8E-20;score=71.5;query6-83;description=ThiS; molybdopterin converting factor subunit 1 911288..911539 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760522 YP_005231917.1 CDS STMMW_08581 NC_016854.1 911541 911993 D pfam_scan;Pfam:PF02391; E()=6.4E-40;score=135.0;query 6-121;description=MoaE; molybdopterin converting factor subunit 2 911541..911993 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760523 YP_005231918.1 CDS STMMW_08591 NC_016854.1 912041 912745 D pfam_scan;Pfam:PF01027; E()=4.5E-33;score=114.3;query 20-231;description=UPF0005; tmhmm; query 1-235; hypothetical protein 912041..912745 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760524 YP_005231919.1 CDS STMMW_08601 NC_016854.1 912892 913599 D tmhmm; query 1-236; hypothetical protein 912892..913599 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760525 YP_005231920.1 CDS STMMW_08611 NC_016854.1 913623 914231 D tmhmm; query 1-203; putative inner membrane protein 913623..914231 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760526 YP_005231921.1 CDS STMMW_08621 NC_016854.1 914239 914799 D tmhmm; query 1-187; putative inner membrane protein 914239..914799 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760527 YP_005231922.1 CDS STMMW_08631 NC_016854.1 914802 915764 R pfam_scan;Pfam:PF03706; E()=1.0E-25;score=90.1;query24-296;description=UPF0104; tmhmm; query 1-321; hypothetical protein complement(914802..915764) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760528 YP_005231923.1 CDS STMMW_08641 NC_016854.1 915764 917005 R pfam_scan;Pfam:PF00614; E()=2.2E-8;score=33.1;query 110-131;description=PLDc; putative phospholipase complement(915764..917005) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760529 YP_005231924.1 CDS STMMW_08651 NC_016854.1 917002 917760 R pfam_scan;Pfam:PF03372; E()=6.0E-28;score=97.3;query10- 250;description=Exo_endo_phos; hypothetical protein complement(917002..917760) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760530 YP_005231925.1 CDS STMMW_08661 NC_016854.1 917893 918303 D pfam_scan;Pfam:PF11076; E()=7.1E-67;score=222.8;query 1-133;description=YbhQ; tmhmm; query 1-137; hypothetical protein 917893..918303 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760531 YP_005231926.1 CDS STMMW_08671 NC_016854.1 918265 919371 R pfam_scan;Pfam:PF01061; E()=3.4E-34;score=117.7;query 171-329;description=ABC2_membrane; tmhmm; query 1-369; putative inner membrane protein complement(918265..919371) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760532 YP_005231927.1 CDS STMMW_08681 NC_016854.1 919487 920617 R pfam_scan;Pfam:PF01061; E()=3.5E-21;score=75.2;query177- 340;description=ABC2_membrane; tmhmm; query 1-377; putative inner membrane protein complement(919487..920617) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760533 YP_005231928.1 CDS STMMW_08691 NC_016854.1 920610 922346 R pfam_scan;Pfam:PF00005; E()=1.9E-32;score=112.5;query 33-196;description=ABC_tran; ABC transporter ATP-binding protein complement(920610..922346) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760534 YP_005231929.1 CDS STMMW_08701 NC_016854.1 922339 923334 R pfam_scan;Pfam:PF00529; E()=3.0E-23;score=82.5;query42-269;description=HlyD; tmhmm; query 1-332; HlyD family secretion protein complement(922339..923334) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760535 YP_005231930.1 CDS STMMW_08711 NC_016854.1 923334 924008 R pfam_scan;Pfam:PF09209; E()=3.7E-36;score=123.1;query 96-218;description=DUF1956; pfam_scan;Pfam:PF00440; E()=8.2E-12;score=44.1;query17-62;description=TetR_N; tetR family transcriptional regulator complement(923334..924008) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760536 YP_005231931.1 CDS STMMW_08721 NC_016854.1 924238 925602 D pfam_scan;Pfam:PF00271; E()=9.7E-27;score=91.7;query264- 339;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=2.3E-58;score=196.7;query 25-196;description=DEAD; putative ATP-dependent RNA helicase rhlE 924238..925602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760537 YP_005231932.1 CDS STMMW_08731 NC_016854.1 925909 927954 D pfam_scan;Pfam:PF06733; E()=3.5E-8;score=33.0;query 162-231;description=DEAD_2; pfam_scan;Pfam:PF00270; E()=7.3E-5;score=21.9;query 13-61;description=DEAD; ATP-dependent helicase 925909..927954 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760538 YP_005231933.1 CDS STMMW_08741 NC_016854.1 927984 928958 D pfam_scan;Pfam:PF02885; E()=3.7E-15;score=54.7;query4- 69;description=Glycos_trans_3N; putative glycosyltransferase 927984..928958 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760539 YP_005231934.1 CDS STMMW_08751 NC_016854.1 929114 929374 R pfam_scan;Pfam:PF07338; E()=4.2E-20;score=71.5;query25-86;description=DUF1471; hypothetical protein complement(929114..929374) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760540 YP_005231935.1 CDS STMMW_08761 NC_016854.1 929659 929925 R pfam_scan;Pfam:PF01258; E()=9.9E-16;score=56.1;query36-69;description=zf- dskA_traR; Zinc-finger containing protein complement(929659..929925) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760541 YP_005231936.1 CDS STMMW_08771 NC_016854.1 930130 931056 D pfam_scan;Pfam:PF05971; E()=1.1E-147;score=490.2;query 3-296;description=Methyltransf_10; hypothetical protein 930130..931056 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760542 YP_005231937.1 CDS STMMW_08781 NC_016854.1 931053 933275 R pfam_scan;Pfam:PF00924; E()=2.6E-47;score=160.4;query 513-713;description=MS_channel; tmhmm; query 1-741; hypothetical protein complement(931053..933275) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760543 YP_005231938.1 CDS STMMW_08791 NC_016854.1 933394 934116 R pfam_scan;Pfam:PF00005; E()=6.5E-53;score=179.4;query 27-197;description=ABC_tran; glutamine transport ATP-binding protein GlnQ complement(933394..934116) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760544 YP_005231939.1 CDS STMMW_08801 NC_016854.1 934113 934772 R pfam_scan;Pfam:PF00528; E()=1.1E-26;score=93.1;query33- 217;description=BPD_transp_1; tmhmm; query 1-220; glutamine transport system permease protein GlnP complement(934113..934772) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760545 YP_005231940.1 CDS STMMW_08811 NC_016854.1 934916 935662 R pfam_scan;Pfam:PF00497; E()=1.3E-73;score=247.4;query 27-244;description=SBP_bac_3; glutamine-binding periplasmic protein complement(934916..935662) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760546 YP_005231941.1 CDS STMMW_08821 NC_016854.1 936139 936642 R pfam_scan;Pfam:PF00210; E()=8.0E-19;score=67.5;query31-166;description=Ferritin; DNA protection during starvation protein complement(936139..936642) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760547 YP_005231942.1 CDS STMMW_08831 NC_016854.1 936945 937832 R pfam_scan;Pfam:PF00892; E()=2.3E-7;score=30.6;query 30-135;description=DUF6; tmhmm; query 1-296; hypothetical protein complement(936945..937832) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760548 YP_005231943.1 CDS STMMW_08841 NC_016854.1 938186 938701 D pfam_scan;Pfam:PF06316; E()=2.8E-21;score=75.5;query2-171;description=Ail_Lom; tmhmm; query 1-172; outer membrane protein x precursor 938186..938701 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760549 YP_005231944.1 CDS STMMW_08861 NC_016854.1 940919 941392 D pfam_scan;Pfam:PF02742; E()=7.1E-12;score=44.2;query95- 151;description=Fe_dep_repr_C; pfam_scan;Pfam:PF01325; E()=2.1E-8;score=33.9;query 38-92;description=Fe_dep_repress; iron dependent repressor family transcriptional regulator 940919..941392 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760551 YP_005231945.1 CDS STMMW_08871 NC_016854.1 941389 942501 D pfam_scan;Pfam:PF03600; E()=1.3E-26;score=93.0;query38-311;description=CitMHS; tmhmm; query 1-371; hypothetical protein 941389..942501 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760552 YP_005231946.1 CDS STMMW_08881 NC_016854.1 942545 943465 R pfam_scan;Pfam:PF03734; E()=1.2E-19;score=70.3;query100-232;description=YkuD; tmhmm; query 1-307; hypothetical protein complement(942545..943465) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760553 YP_005231947.1 CDS STMMW_08891 NC_016854.1 943684 945276 D pfam_scan;Pfam:PF00005; E()=4.1E-33;score=114.8;query 27-213;description=ABC_tran; ABC transporter ATP-binding protein 943684..945276 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760554 YP_005231948.1 CDS STMMW_08901 NC_016854.1 945885 946628 D hypothetical protein 945885..946628 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760555 YP_005231949.1 CDS STMMW_08911 NC_016854.1 946657 947187 R note the differing N-terminus when compared to S. typhimurium LT2; pfam_scan;Pfam:PF08282; E()=1.6E-30;score=106.2;query 2-164;description=Hydrolase_3; hypothetical protein complement(946657..947187) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760556 YP_005231950.1 CDS STMMW_08921 NC_016854.1 947581 948846 R pfam_scan;Pfam:PF07350; E()=3.6E-150;score=499.5;query 16-418;description=DUF1479; hypothetical protein complement(947581..948846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760557 YP_005231951.1 CDS STMMW_08931 NC_016854.1 949108 949917 D pfam_scan;Pfam:PF08282; E()=8.6E-53;score=179.1;query 6-259;description=Hydrolase_3; hypothetical protein 949108..949917 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760558 YP_005231952.1 CDS STMMW_08941 NC_016854.1 949995 952427 R pfam_scan;Pfam:PF02901; E()=4.7E-203;score=675.5;query 11-671;description=PFL; pfam_scan;Pfam:PF01228; E()=6.0E-34;score=115.9;query 687-792;description=Gly_radical; putative formate acetyltransferase 3 complement(949995..952427) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760559 YP_005231953.1 CDS STMMW_08951 NC_016854.1 952433 953332 R pfam_scan;Pfam:PF04055; E()=8.9E-13;score=48.1;query20- 231;description=Radical_SAM; putative pyruvate formate-lyase 3 activating protein complement(952433..953332) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760560 YP_005231954.1 CDS STMMW_08961 NC_016854.1 953610 954359 R pfam_scan;Pfam:PF00899; E()=4.8E-47;score=158.8;query 30-164;description=ThiF; pfam_scan;Pfam:PF05237; E()=5.8E-27;score=93.0;query169-249;description=MoeZ_MoeB; molybdopterin biosynthesis protein MoeB complement(953610..954359) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760561 YP_005231955.1 CDS STMMW_08971 NC_016854.1 954359 955600 R pfam_scan;Pfam:PF03454; E()=1.2E-19;score=69.8;query335-407;description=MoeA_C; pfam_scan;Pfam:PF00994; E()=2.2E-37;score=127.8;query 184-320;description=MoCF_biosynth; pfam_scan;Pfam:PF03453; E()=1.7E-57;score=193.1;query 9-170;description=MoeA_N; molybdopterin biosynthesis MoeA protein complement(954359..955600) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760562 YP_005231956.1 CDS STMMW_08981 NC_016854.1 955797 956738 D pfam_scan;Pfam:PF01112; E()=1.7E-122;score=408.0;query 3-313;description=Asparaginase_2; putative L-asparaginase 955797..956738 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760563 YP_005231957.1 CDS STMMW_08991 NC_016854.1 956749 958620 D pfam_scan;Pfam:PF00005; E()=6.5E-44;score=150.0;query 42-230;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=2.9E-8;score=32.8;query 248-290;description=oligo_HPY; ABC transporter ATP-binding protein 956749..958620 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760564 YP_005231958.1 CDS STMMW_09001 NC_016854.1 958653 960191 D pfam_scan;Pfam:PF00496; E()=3.4E-104;score=348.4;query 70-429;description=SBP_bac_5; putative ABC transporter periplasmic binding protein 958653..960191 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760565 YP_005231959.1 CDS STMMW_09011 NC_016854.1 960252 961172 D pfam_scan;Pfam:PF00528; E()=4.8E-43;score=146.3;query 113-304;description=BPD_transp_1; tmhmm; query 1-307; ABC transporter permease protein 960252..961172 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760566 YP_005231960.1 CDS STMMW_09021 NC_016854.1 961175 962086 D pfam_scan;Pfam:PF00528; E()=1.1E-34;score=119.1;query 119-302;description=BPD_transp_1; ABC transporter permease protein 961175..962086 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760567 YP_005231961.1 CDS STMMW_09031 NC_016854.1 962177 963502 R pfam_scan;Pfam:PF00919; E()=5.0E-22;score=77.2;query9-97;description=UPF0004; pfam_scan;Pfam:PF04055; E()=7.0E-25;score=87.4;query145- 323;description=Radical_SAM; hypothetical protein complement(962177..963502) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760568 YP_005231962.1 CDS STMMW_09041 NC_016854.1 963733 964116 D pfam_scan;Pfam:PF10799; E()=7.8E-75;score=248.5;query 1-126;description=YliH; hypothetical protein 963733..964116 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760569 YP_005231963.1 CDS STMMW_09051 NC_016854.1 964829 965344 D pfam_scan;Pfam:PF03328; E()=1.2E-6;score=27.7;query 6-53;description=HpcH_HpaI; hypothetical protein 964829..965344 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760570 YP_005231964.1 CDS STMMW_09061 NC_016854.1 965262 966116 D pfam_scan;Pfam:PF01012; E()=1.6E-32;score=112.3;query 67-218;description=ETF; putative electron transfer flavoprotein (beta subunit) 965262..966116 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760571 YP_005231965.1 CDS STMMW_09071 NC_016854.1 966127 967074 D pfam_scan;Pfam:PF01012; E()=4.2E-36;score=123.9;query 4-157;description=ETF; pfam_scan;Pfam:PF00766; E()=3.3E-36;score=122.7;query 194-278;description=ETF_alpha; putative electron transfer flavoprotein (alpha subunit) 966127..967074 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760572 YP_005231966.1 CDS STMMW_09081 NC_016854.1 967368 968531 D pfam_scan;Pfam:PF00441; E()=5.7E-33;score=113.8;query 232-380;description=Acyl-CoA_dh_1; pfam_scan;Pfam:PF02771; E()=3.4E-24;score=84.9;query7-116;description=Acyl- CoA_dh_N; pfam_scan;Pfam:PF02770; E()=1.9E-18;score=65.4;query121-171;description=Acyl- CoA_dh_M; putative acyl-CoA dehydrogenase 967368..968531 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760573 YP_005231967.1 CDS STMMW_09091 NC_016854.1 968980 970665 D pfam_scan;Pfam:PF01946; E()=1.4E-4;score=21.0;query 9-64;description=Thi4; pfam_scan;Pfam:PF05187; E()=4.5E-41;score=139.0;query 403-515;description=ETF_QO; putative flavoprotein 968980..970665 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760574 YP_005231968.1 CDS STMMW_09101 NC_016854.1 970671 971561 R pfam_scan;Pfam:PF00126; E()=6.0E-13;score=48.1;query5-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.0E-37;score=126.9;query 91-294;description=LysR_substrate; LysR transcriptional regulator complement(970671..971561) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760575 YP_005231969.1 CDS STMMW_09111 NC_016854.1 971826 972251 R pfam_scan;Pfam:PF03600; E()=4.5E-22;score=78.0;query2-114;description=CitMHS; tmhmm; query 1-142; putative inner membrane protein complement(971826..972251) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760576 YP_005231970.1 CDS STMMW_09121 NC_016854.1 972598 973278 D pfam_scan;Pfam:PF07995; E()=7.4E-39;score=131.6;query 81-187;description=GSDH; pfam_scan;Pfam:PF03811; E()=3.5E-26;score=90.3;query1-68;description=Ins_element1; putative dehydrogenase 972598..973278 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760577 YP_005231971.1 CDS STMMW_09131 NC_016854.1 973275 973901 R pfam_scan;Pfam:PF00043; E()=1.5E-10;score=40.4;query120-197;description=GST_C; pfam_scan;Pfam:PF02798; E()=8.0E-12;score=44.5;query5-76;description=GST_N; glutathione s-transferase family protein complement(973275..973901) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760578 YP_005231972.1 CDS STMMW_09141 NC_016854.1 974145 975347 D pfam_scan;Pfam:PF00768; E()=3.8E-102;score=340.5;query 30-266;description=Peptidase_S11; pfam_scan;Pfam:PF07943; E()=2.3E-27;score=94.6;query285-376;description=PBP5_C; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6 precursor) 974145..975347 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760579 YP_005231973.1 CDS STMMW_09151 NC_016854.1 975392 976150 R pfam_scan;Pfam:PF00455; E()=5.8E-49;score=165.4;query 77-232;description=DeoR; pfam_scan;Pfam:PF08220; E()=7.0E-12;score=44.2;query8-56;description=HTH_DeoR; deoxyribose operon repressor complement(975392..976150) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760580 YP_005231974.1 CDS STMMW_09161 NC_016854.1 976222 976830 R pfam_scan;Pfam:PF01569; E()=1.2E-20;score=73.1;query62-174;description=PAP2; tmhmm; query 1-203; putative permease complement(976222..976830) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760581 YP_005231975.1 CDS STMMW_09171 NC_016854.1 977143 978375 D pfam_scan;Pfam:PF07690; E()=3.7E-30;score=105.1;query 25-362;description=MFS_1; tmhmm; query 1-411; multidrug translocase MdfA 977143..978375 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760582 YP_005231976.1 CDS STMMW_09181 NC_016854.1 978429 979244 R pfam_scan;Pfam:PF08282; E()=1.9E-54;score=184.6;query 6-259;description=Hydrolase_3; hypothetical protein complement(978429..979244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760583 YP_005231977.1 CDS STMMW_09191 NC_016854.1 979241 980452 R pfam_scan;Pfam:PF07690; E()=9.6E-19;score=67.5;query223-386;description=MFS_1; tmhmm; query 1-404; hypothetical protein complement(979241..980452) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760584 YP_005231978.1 CDS STMMW_09201 NC_016854.1 980620 981240 D pfam_scan;Pfam:PF00440; E()=2.1E-7;score=30.1;query 18-63;description=TetR_N; putative TetR family transcriptional regulator 980620..981240 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760585 YP_005231979.1 CDS STMMW_09211 NC_016854.1 981357 983042 R pfam_scan;Pfam:PF06826; E()=1.0E-41;score=142.0;query 17-182;description=Asp-Al_Ex; pfam_scan;Pfam:PF02080; E()=3.2E-12;score=45.8;query227-285;description=TrkA_C; tmhmm; query 1-562; hypothetical protein complement(981357..983042) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760586 YP_005231980.1 CDS STMMW_09221 NC_016854.1 983313 983690 D pfam_scan;Pfam:PF11045; E()=5.8E-63;score=209.8;query 1-125;description=YbjM; tmhmm; query 1-126; hypothetical protein 983313..983690 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760587 YP_005231981.1 CDS STMMW_09231 NC_016854.1 983722 983985 R pfam_scan;Pfam:PF00462; E()=7.0E-13;score=47.9;query4-69;description=Glutaredoxin; glutaredoxin complement(983722..983985) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760588 YP_005231982.1 CDS STMMW_09241 NC_016854.1 984155 984445 D pfam_scan;Pfam:PF07214; E()=1.5E-45;score=152.8;query 1-96;description=DUF1418; tmhmm; query 1-97; hypothetical protein 984155..984445 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760589 YP_005231983.1 CDS STMMW_09251 NC_016854.1 984492 985151 D pfam_scan;Pfam:PF00881; E()=1.4E-16;score=60.8;query1- 138;description=Nitroreductase; oxygen-insensitive NADPH nitroreductase 984492..985151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760590 YP_005231984.1 CDS STMMW_09261 NC_016854.1 985209 986111 D pfam_scan;Pfam:PF08443; E()=1.0E-78;score=263.1;query 97-286;description=RimK; ribosomal protein S6 modification protein 985209..986111 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760591 YP_005231985.1 CDS STMMW_09271 NC_016854.1 986208 986684 D pfam_scan;Pfam:PF10722; E()=2.1E-71;score=238.0;query 1-158;description=YbjN; hypothetical protein 986208..986684 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760592 YP_005231986.1 CDS STMMW_09281 NC_016854.1 987033 988145 D pfam_scan;Pfam:PF01547; E()=2.5E-18;score=66.3;query46-304;description=SBP_bac_1; putrescine-binding periplasmic protein 987033..988145 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760593 YP_005231987.1 CDS STMMW_09291 NC_016854.1 988233 989366 D pfam_scan;Pfam:PF08402; E()=9.5E-19;score=67.0;query295-375;description=TOBE_2; pfam_scan;Pfam:PF00005; E()=1.2E-48;score=165.5;query 45-211;description=ABC_tran; putrescine transport ATP-binding protein PotG 988233..989366 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760594 YP_005231988.1 CDS STMMW_09301 NC_016854.1 989376 990329 D pfam_scan;Pfam:PF00528; E()=3.0E-19;score=68.8;query117- 313;description=BPD_transp_1; tmhmm; query 1-318; putrescine transport system permease PotH 989376..990329 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760595 YP_005231989.1 CDS STMMW_09311 NC_016854.1 990326 991171 D pfam_scan;Pfam:PF00528; E()=1.5E-12;score=47.0;query79- 273;description=BPD_transp_1; tmhmm; query 1-282; putrescine transport system permease PotI 990326..991171 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760596 YP_005231990.1 CDS STMMW_09321 NC_016854.1 991245 991718 D pfam_scan;Pfam:PF10767; E()=3.0E-69;score=230.9;query 15-157;description=DUF2593; tmhmm; query 1-158; hypothetical protein 991245..991718 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760597 YP_005231991.1 CDS STMMW_09331 NC_016854.1 991761 992891 D pfam_scan;Pfam:PF05958; E()=3.4E-16;score=58.7;query208-374;description=tRNA_U5- meth_tr; RNA methyltransferase 991761..992891 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760598 YP_005231992.1 CDS STMMW_09341 NC_016854.1 993174 994517 D pfam_scan;Pfam:PF03611; E()=9.7E-103;score=343.7;query 15-422;description=EIIC-GAT; tmhmm; query 1-448; transport protein 993174..994517 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760599 YP_005231993.1 CDS STMMW_09351 NC_016854.1 994547 994867 D pfam_scan;Pfam:PF02302; E()=1.8E-8;score=34.7;query 6-88;description=PTS_IIB; putative phosphotransferase enzyme II, B component 994547..994867 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760600 YP_005231994.1 CDS STMMW_09361 NC_016854.1 994877 996364 D pfam_scan;Pfam:PF00884; E()=2.5E-33;score=114.8;query 4-458;description=Sulfatase; sulfatase 994877..996364 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760601 YP_005231995.1 CDS STMMW_09371 NC_016854.1 996583 997314 R pfam_scan;Pfam:PF00497; E()=8.6E-78;score=261.1;query 23-242;description=SBP_bac_3; arginine/ornithine ABC transporter substrate-binding protein complement(996583..997314) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760602 YP_005231996.1 CDS STMMW_09381 NC_016854.1 997551 998219 R pfam_scan;Pfam:PF00528; E()=2.4E-14;score=52.9;query33- 214;description=BPD_transp_1; tmhmm; query 1-223; arginine transport system permease protein ArtM complement(997551..998219) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760603 YP_005231997.1 CDS STMMW_09391 NC_016854.1 998219 998935 R pfam_scan;Pfam:PF00528; E()=1.1E-17;score=63.7;query25- 230;description=BPD_transp_1; tmhmm; query 1-239; arginine transport system permease protein ArtQ complement(998219..998935) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760604 YP_005231998.1 CDS STMMW_09401 NC_016854.1 998942 999673 R pfam_scan;Pfam:PF00497; E()=3.8E-77;score=259.0;query 23-242;description=SBP_bac_3; arginine/ornithine ABC transporter substrate-binding protein complement(998942..999673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760605 YP_005231999.1 CDS STMMW_09411 NC_016854.1 999691 1000419 R pfam_scan;Pfam:PF00005; E()=5.2E-54;score=183.0;query 28-202;description=ABC_tran; arginine transport ATP-binding protein ArtP complement(999691..1000419) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760606 YP_005232000.1 CDS STMMW_09421 NC_016854.1 1000649 1001164 R Signal peptide; signalp; query 1-28;cleavage_site_probability=0.788; 0.999; lipoprotein complement(1000649..1001164) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760607 YP_005232001.1 CDS STMMW_09431 NC_016854.1 1001292 1001615 D pfam_scan;Pfam:PF01906; E()=1.3E-42;score=143.7;query 1-105;description=DUF74; hypothetical protein 1001292..1001615 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760608 YP_005232002.1 CDS STMMW_09441 NC_016854.1 1001612 1002442 D pfam_scan;Pfam:PF01510; E()=1.0E-25;score=89.6;query40-179;description=Amidase_2; putative N-acetylmuramoyl-L-alanine amidase 1001612..1002442 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760609 YP_005232003.1 CDS STMMW_09451 NC_016854.1 1002439 1003452 R pfam_scan;Pfam:PF01370; E()=9.7E-28;score=96.8;query3-234;description=Epimerase; putative oxidoreductase complement(1002439..1003452) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760610 YP_005232004.1 CDS STMMW_09461 NC_016854.1 1003548 1004981 R pfam_scan;Pfam:PF01370; E()=9.7E-13;score=47.7;query5-113;description=Epimerase; pfam_scan;Pfam:PF11066; E()=1.4E-5;score=25.2;query 358-463;description=DUF2867; tmhmm; query 1-478; hypothetical protein complement(1003548..1004981) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760611 YP_005232005.1 CDS STMMW_09471 NC_016854.1 1004992 1005978 R note the inframe deletion of 13 bases between codons 27 and 28 compared to the other S. typhimurium orthologues; pfam_scan;Pfam:PF01212; E()=4.6E-105;score=350.3;query 3-276;description=Beta_elim_lyase; L-allo-threonine aldolase complement(1004992..1005978) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760612 YP_005232006.1 CDS STMMW_09481 NC_016854.1 1006017 1007735 R pfam_scan;Pfam:PF00205; E()=1.0E-33;score=115.2;query 191-319;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=2.6E-45;score=153.8;query 4-171;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=6.0E-43;score=146.0;query 379-525;description=TPP_enzyme_C; pyruvate dehydrogenase complement(1006017..1007735) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760613 YP_005232007.1 CDS STMMW_09491 NC_016854.1 1007893 1008864 R pfam_scan;Pfam:PF00175; E()=1.3E-8;score=34.7;query 117-212;description=NAD_binding_1; pfam_scan;Pfam:PF00111; E()=1.5E-16;score=59.4;query248-317;description=Fer2; pfam_scan;Pfam:PF00970; E()=2.6E-11;score=43.0;query14- 105;description=FAD_binding_6; NADH oxidoreductase Hcr complement(1007893..1008864) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760614 YP_005232008.1 CDS STMMW_09501 NC_016854.1 1008873 1010525 R pfam_scan;Pfam:PF03063; E()=9.5E-195;score=648.4;query 1-548;description=Prismane; prismane protein homolog (hybrid-cluster protein) complement(1008873..1010525) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760615 YP_005232009.1 CDS STMMW_09511 NC_016854.1 1010669 1011460 R pfam_scan;Pfam:PF03956; E()=2.5E-70;score=235.6;query 76-262;description=DUF340; tmhmm; query 1-264; hypothetical protein complement(1010669..1011460) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760616 YP_005232010.1 CDS STMMW_09521 NC_016854.1 1011770 1013428 D pfam_scan;Pfam:PF11398; E()=7.1E-63;score=210.9;query 84-269;description=DUF2813; hypothetical protein 1011770..1013428 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760617 YP_005232011.1 CDS STMMW_09531 NC_016854.1 1013425 1014393 R pfam_scan;Pfam:PF04393; E()=3.6E-106;score=354.0;query 36-320;description=DUF535; putative virK protein complement(1013425..1014393) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760618 YP_005232012.1 CDS STMMW_09541 NC_016854.1 1014521 1015639 D pfam_scan;Pfam:PF00529; E()=4.4E-15;score=55.7;query61-236;description=HlyD; tmhmm; query 1-373; hypothetical protein 1014521..1015639 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760619 YP_005232013.1 CDS STMMW_09561 NC_016854.1 1017710 1017931 R pfam_scan;Pfam:PF00313; E()=2.6E-29;score=100.1;query 1-65;description=CSD; cold shock-like protein complement(1017710..1017931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760621 YP_005232014.1 CDS STMMW_09571 NC_016854.1 1018255 1018575 D pfam_scan;Pfam:PF02617; E()=2.9E-38;score=129.1;query 23-103;description=ClpS; hypothetical protein 1018255..1018575 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760622 YP_005232015.1 CDS STMMW_09581 NC_016854.1 1018606 1020882 D pfam_scan;Pfam:PF10431; E()=4.3E-27;score=93.5;query653-738;description=ClpB_D2- small; pfam_scan;Pfam:PF00004; E()=9.7E-13;score=47.9;query211-342;description=AAA; pfam_scan;Pfam:PF02861; E()=4.7E-14;score=51.5;query13-62;description=Clp_N; pfam_scan;Pfam:PF07724; E()=1.9E-61;score=206.3;query 486-647;description=AAA_2; ATP-dependent Clp protease ATP-binding subunit ClpA 1018606..1020882 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760623 YP_005232016.1 CDS STMMW_09591 NC_016854.1 1021074 1021532 D pfam_scan;Pfam:PF01797; E()=6.0E-40;score=135.3;query 12-129;description=Transposase_17; transposase for the IS1541 insertion element 1021074..1021532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760624 YP_005232017.1 CDS STMMW_09601 NC_016854.1 1021995 1022678 R pfam_scan;Pfam:PF00665; E()=1.2E-34;score=119.0;query 58-209;description=rve; putative integrase protein complement(1021995..1022678) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760625 YP_005232018.1 CDS STMMW_09602 NC_016854.1 1022681 1022839 R hypothetical protein complement(1022681..1022839) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760626 YP_005232019.1 CDS STMMW_09611 NC_016854.1 1022849 1023250 R ISPsy11, transposase OrfA complement(1022849..1023250) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760627 YP_005232020.1 CDS STMMW_09621 NC_016854.1 1023587 1024264 R pfam_scan;Pfam:PF00857; E()=7.3E-25;score=86.9;query20- 172;description=Isochorismatase; hypothetical protein complement(1023587..1024264) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760628 YP_005232021.1 CDS STMMW_09631 NC_016854.1 1024284 1025144 R pfam_scan;Pfam:PF02678; E()=1.7E-36;score=123.9;query 20-127;description=Pirin; pfam_scan;Pfam:PF05726; E()=8.5E-34;score=115.2;query 182-284;description=Pirin_C; putative pirin-related protein complement(1024284..1025144) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760629 YP_005232022.1 CDS STMMW_09641 NC_016854.1 1025253 1026164 D pfam_scan;Pfam:PF00126; E()=3.3E-15;score=55.3;query6-65;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.5E-39;score=134.9;query 91-297;description=LysR_substrate; transcriptional activator 1025253..1026164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760630 YP_005232023.1 CDS STMMW_09651 NC_016854.1 1026255 1026473 R pfam_scan;Pfam:PF01176; E()=4.0E-29;score=99.6;query5-70;description=eIF-1a; initiation factor IF-1 complement(1026255..1026473) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760631 YP_005232024.1 CDS STMMW_09661 NC_016854.1 1026401 1026784 R tmhmm; query 1-128; inner membrane protein complement(1026401..1026784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760632 YP_005232025.1 CDS STMMW_09671 NC_016854.1 1026785 1027489 R pfam_scan;Pfam:PF03588; E()=3.6E-73;score=244.2;query 35-204;description=Leu_Phe_trans; leucyl/phenylalanyl-tRNA-protein transferase complement(1026785..1027489) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760633 YP_005232026.1 CDS STMMW_09681 NC_016854.1 1027534 1029255 R pfam_scan;Pfam:PF00664; E()=1.2E-6;score=27.5;query 68-287;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=6.8E-44;score=150.0;query 366-534;description=ABC_tran; tmhmm; query 1-574; transport ATP-binding protein CydC complement(1027534..1029255) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760634 YP_005232027.1 CDS STMMW_09691 NC_016854.1 1029256 1031022 R pfam_scan;Pfam:PF00664; E()=4.6E-44;score=150.3;query 26-289;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=9.7E-44;score=149.5;query 376-545;description=ABC_tran; tmhmm; query 1-589; transport ATP-binding protein CydD complement(1029256..1031022) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760635 YP_005232028.1 CDS STMMW_09701 NC_016854.1 1031136 1032104 R pfam_scan;Pfam:PF07992; E()=1.9E-46;score=158.4;query 8-291;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=1.5E-15;score=57.1;query148-245;description=Pyr_redox; thioredoxin reductase complement(1031136..1032104) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760636 YP_005232029.1 CDS STMMW_09711 NC_016854.1 1032650 1033144 D pfam_scan;Pfam:PF01037; E()=2.7E-24;score=84.2;query78- 152;description=AsnC_trans_reg; leucine-responsive regulatory protein 1032650..1033144 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760637 YP_005232030.1 CDS STMMW_09721 NC_016854.1 1033222 1037364 D pfam_scan;Pfam:PF09397; E()=3.9E-28;score=96.0;query1314- 1376;description=Ftsk_gamma; pfam_scan;Pfam:PF01580; E()=1.3E-81;score=272.3;query 999-1212;description=FtsK_SpoIIIE; tmhmm; query 1-1381; cell division protein FtsK 1033222..1037364 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760638 YP_005232031.1 CDS STMMW_09731 NC_016854.1 1037504 1038118 D pfam_scan;Pfam:PF03548; E()=2.0E-58;score=196.7;query 34-192;description=LolA; outer membrane lipoprotein carrier protein 1037504..1038118 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760639 YP_005232032.1 CDS STMMW_09741 NC_016854.1 1038128 1039471 D pfam_scan;Pfam:PF00004; E()=3.2E-17;score=62.4;query53-158;description=AAA; hypothetical protein 1038128..1039471 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760640 YP_005232033.1 CDS STMMW_09751 NC_016854.1 1039730 1041022 D pfam_scan;Pfam:PF00587; E()=2.3E-48;score=163.3;query 173-350;description=tRNA-synt_2b; pfam_scan;Pfam:PF02403; E()=8.2E-34;score=115.8;query 1-107;description=Seryl_tRNA_N; seryl-tRNA synthetase 1039730..1041022 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760641 YP_005232034.1 CDS STMMW_09761 NC_016854.1 1041259 1043703 D pfam_scan;Pfam:PF00384; E()=2.7E-76;score=256.6;query 119-576;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=5.2E-11;score=41.8;query56- 116;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=9.3E-28;score=95.6;query695- 806;description=Molydop_binding; anaerobic dimethyl sulfoxide reductase subunit A 1041259..1043703 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760642 YP_005232035.1 CDS STMMW_09771 NC_016854.1 1043714 1044331 D pfam_scan;Pfam:PF00037; E()=2.6E-7;score=29.3;query 92-114;description=Fer4; anaerobic dimethyl sulfoxide reductase subunit B 1043714..1044331 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760643 YP_005232036.1 CDS STMMW_09781 NC_016854.1 1044333 1045196 D pfam_scan;Pfam:PF04976; E()=7.3E-118;score=392.3;query 1-277;description=DmsC; tmhmm; query 1-288; anaerobic dimethyl sulfoxide reductase chain C 1044333..1045196 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760644 YP_005232037.1 CDS STMMW_09791 NC_016854.1 1045546 1046694 D pfam_scan;Pfam:PF07690; E()=5.5E-26;score=91.3;query11-315;description=MFS_1; tmhmm; query 1-383; transport protein 1045546..1046694 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760645 YP_005232038.1 CDS STMMW_09801 NC_016854.1 1046912 1048333 D pfam_scan;Pfam:PF00324; E()=5.1E-19;score=67.5;query36- 464;description=AA_permease; tmhmm; query 1-474; transport protein 1046912..1048333 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760646 YP_005232039.1 CDS STMMW_09811 NC_016854.1 1048626 1049450 R pfam_scan;Pfam:PF04055; E()=3.2E-26;score=91.8;query53- 206;description=Radical_SAM; pyruvate formate-lyase 1 activating enzyme complement(1048626..1049450) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760647 YP_005232040.1 CDS STMMW_09821 NC_016854.1 1049542 1049868 R hypothetical protein complement(1049542..1049868) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760648 YP_005232041.1 CDS STMMW_09831 NC_016854.1 1049999 1050958 D pfam_scan;Pfam:PF11047; E()=3.4E-197;score=653.2;query 1-319;description=SopD; putative sopD2 type III secretion system effector protein 1049999..1050958 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760649 YP_005232042.1 CDS STMMW_09841 NC_016854.1 1051034 1053316 R pfam_scan;Pfam:PF02901; E()=9.4E-244;score=810.0;query 20-614;description=PFL; pfam_scan;Pfam:PF01228; E()=3.1E-41;score=139.3;query 630-741;description=Gly_radical; formate acetyltransferase 1 complement(1051034..1053316) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760650 YP_005232043.1 CDS STMMW_09851 NC_016854.1 1053376 1054233 R pfam_scan;Pfam:PF01226; E()=2.3E-85;score=285.2;query 12-278;description=Form_Nir_trans; tmhmm; query 1-286; formate transporter (formate channel) complement(1053376..1054233) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760651 YP_005232044.1 CDS STMMW_09861 NC_016854.1 1054638 1056398 R pfam_scan;Pfam:PF02624; E()=4.9E-75;score=252.6;query 58-391;description=YcaO; hypothetical protein complement(1054638..1056398) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760652 YP_005232045.1 CDS STMMW_09871 NC_016854.1 1056535 1057227 D pfam_scan;Pfam:PF04239; E()=1.1E-18;score=66.6;query102-166;description=DUF421; tmhmm; query 1-231; hypothetical protein 1056535..1057227 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760653 YP_005232046.1 CDS STMMW_09881 NC_016854.1 1057413 1058501 D pfam_scan;Pfam:PF00266; E()=9.6E-42;score=142.6;query 4-350;description=Aminotran_5; phosphoserine aminotransferase 1057413..1058501 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760654 YP_005232047.1 CDS STMMW_09891 NC_016854.1 1058572 1059855 D pfam_scan;Pfam:PF00275; E()=1.0E-162;score=541.3;query 7-420;description=EPSP_synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1058572..1059855 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760655 YP_005232048.1 CDS STMMW_09901 NC_016854.1 1059998 1060759 D pfam_scan;Pfam:PF01435; E()=4.6E-31;score=107.3;query 85-250;description=Peptidase_M48; putative lipoprotein 1059998..1060759 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760656 YP_005232049.1 CDS STMMW_09911 NC_016854.1 1060932 1061615 D pfam_scan;Pfam:PF02224; E()=1.5E-62;score=209.5;query 63-218;description=Cytidylate_kin; cytidylate kinase 1060932..1061615 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760657 YP_005232050.1 CDS STMMW_09921 NC_016854.1 1061729 1063402 D pfam_scan;Pfam:PF00575; E()=3.9E-11;score=42.5;query19-86;description=S1; 30S ribosomal protein S1 1061729..1063402 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760658 YP_005232051.1 CDS STMMW_09931 NC_016854.1 1063558 1063842 D pfam_scan;Pfam:PF00216; E()=6.7E-31;score=105.8;query 1-91;description=Bac_DNA_binding; integration host factor beta-subunit (IHF-beta) 1063558..1063842 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760659 YP_005232052.1 CDS STMMW_09941 NC_016854.1 1064072 1066336 D pfam_scan;Pfam:PF03772; E()=3.4E-56;score=190.2;query 201-467;description=Competence; pfam_scan;Pfam:PF00753; E()=4.9E-12;score=45.3;query506- 655;description=Lactamase_B; tmhmm; query 1-755; putative competence-related protein 1064072..1066336 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760660 YP_005232053.1 CDS STMMW_09951 NC_016854.1 1066373 1068121 D pfam_scan;Pfam:PF00664; E()=2.9E-60;score=203.4;query 28-298;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=1.5E-45;score=155.4;query 369-539;description=ABC_tran; transport ATP-binding protein MsbA 1066373..1068121 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760661 YP_005232054.1 CDS STMMW_09961 NC_016854.1 1068118 1069095 D pfam_scan;Pfam:PF02606; E()=4.0E-117;score=389.9;query 13-319;description=LpxK; tmhmm; query 1-326; tetraacyldisaccharide 4'-kinase 1068118..1069095 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760662 YP_005232055.1 CDS STMMW_09971 NC_016854.1 1069139 1070371 D pfam_scan;Pfam:PF06224; E()=1.6E-136;score=454.8;query 6-381;description=DUF1006; hypothetical protein 1069139..1070371 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760663 YP_005232056.1 CDS STMMW_09981 NC_016854.1 1070423 1070605 D pfam_scan;Pfam:PF03966; E()=9.9E-16;score=56.5;query2-41;description=Trm112p; hypothetical protein 1070423..1070605 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760664 YP_005232057.1 CDS STMMW_09991 NC_016854.1 1070602 1071348 D pfam_scan;Pfam:PF02348; E()=1.2E-75;score=253.6;query 4-221;description=CTP_transf_3; 3-deoxy-manno-octulosonate cytidylyltransferase 1070602..1071348 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760665 YP_005232058.1 CDS STMMW_10001 NC_016854.1 1071559 1072452 D pfam_scan;Pfam:PF01636; E()=2.1E-6;score=27.2;query 65-244;description=APH; hypothetical protein 1071559..1072452 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760666 YP_005232059.1 CDS STMMW_10011 NC_016854.1 1072432 1073208 R pfam_scan;Pfam:PF02698; E()=4.8E-36;score=123.3;query 79-242;description=DUF218; tmhmm; query 1-259; hypothetical protein complement(1072432..1073208) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760667 YP_005232060.1 CDS STMMW_10021 NC_016854.1 1073344 1074147 D pfam_scan;Pfam:PF08241; E()=1.2E-17;score=63.6;query49- 145;description=Methyltransf_11; putative methyltransferase; SmtA protein 1073344..1074147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760668 YP_005232061.1 CDS STMMW_10031 NC_016854.1 1074140 1075462 D pfam_scan;Pfam:PF03882; E()=1.2E-267;score=887.5;query 1-440;description=KicB; killing factor KicB 1074140..1075462 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760669 YP_005232062.1 CDS STMMW_10041 NC_016854.1 1075443 1076147 D pfam_scan;Pfam:PF04288; E()=7.3E-134;score=443.7;query 10-234;description=MukE; KicA protein 1075443..1076147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760670 YP_005232063.1 CDS STMMW_10051 NC_016854.1 1076147 1080613 D pfam_scan;Pfam:PF04310; E()=2.1E-144;score=478.2;query 1-227;description=MukB; cell division protein 1076147..1080613 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760671 YP_005232064.1 CDS STMMW_10061 NC_016854.1 1080958 1082799 D pfam_scan;Pfam:PF03734; E()=2.4E-21;score=75.8;query374-540;description=YkuD; pfam_scan;Pfam:PF01471; E()=4.2E-7;score=29.6;query 311-346;description=PG_binding_1; hypothetical protein 1080958..1082799 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760672 YP_005232065.1 CDS STMMW_10071 NC_016854.1 1083059 1083607 D pfam_scan;Pfam:PF05951; E()=8.5E-63;score=210.1;query 34-182;description=Peptidase_M15_2; tmhmm; query 1-183; hypothetical protein 1083059..1083607 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760673 YP_005232066.1 CDS STMMW_10081 NC_016854.1 1083635 1084282 D pfam_scan;Pfam:PF00753; E()=7.5E-39;score=132.8;query 10-192;description=Lactamase_B; hypothetical protein 1083635..1084282 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760674 YP_005232067.1 CDS STMMW_10091 NC_016854.1 1084344 1085534 R pfam_scan;Pfam:PF00155; E()=1.8E-100;score=336.1;query 27-392;description=Aminotran_1_2; aspartate aminotransferase complement(1084344..1085534) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760675 YP_005232068.1 CDS STMMW_10101 NC_016854.1 1085719 1086810 R pfam_scan;Pfam:PF00267; E()=3.4E-141;score=469.8;query 28-363;description=Porin_1; outer membrane protein F complement(1085719..1086810) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760676 YP_005232069.1 CDS STMMW_10111 NC_016854.1 1087417 1088817 R pfam_scan;Pfam:PF01336; E()=2.0E-14;score=52.7;query20-99;description=tRNA_anti; pfam_scan;Pfam:PF00152; E()=8.5E-65;score=218.7;query 122-461;description=tRNA-synt_2; asparaginyl-tRNA synthetase complement(1087417..1088817) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760677 YP_005232070.1 CDS STMMW_10121 NC_016854.1 1089018 1089479 R pfam_scan;Pfam:PF08279; E()=1.5E-7;score=30.7;query 9-48;description=HTH_11; pfam_scan;Pfam:PF01037; E()=3.5E-16;score=58.3;query69- 142;description=AsnC_trans_reg; putative transcriptional regulator complement(1089018..1089479) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760678 YP_005232071.1 CDS STMMW_10131 NC_016854.1 1089796 1091010 D pfam_scan;Pfam:PF00291; E()=4.6E-36;score=124.7;query 42-329;description=PALP; diaminopropionate ammonia-lyase 1089796..1091010 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760679 YP_005232072.1 CDS STMMW_10141 NC_016854.1 1091255 1092691 D pfam_scan;Pfam:PF01235; E()=6.3E-91;score=304.8;query 64-457;description=Na_Ala_symp; tmhmm; query 1-479; putative ion:amino acid symporter 1091255..1092691 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760680 YP_005232073.1 CDS STMMW_10151 NC_016854.1 1092769 1093971 R pfam_scan;Pfam:PF04095; E()=1.4E-87;score=292.5;query 169-394;description=NAPRTase; nicotinate phosphoribosyltransferase complement(1092769..1093971) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760681 YP_005232074.1 CDS STMMW_10161 NC_016854.1 1094166 1095458 R pfam_scan;Pfam:PF00589; E()=5.6E-16;score=58.6;query224- 396;description=Phage_integrase; integrase complement(1094166..1095458) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760682 YP_005232075.1 CDS STMMW_10171 NC_016854.1 1095503 1095751 R pfam_scan;Pfam:PF06806; E()=1.6E-34;score=116.6;query 4-74;description=DUF1233; excisionase complement(1095503..1095751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760683 YP_005232076.1 CDS STMMW_10181 NC_016854.1 1095792 1096031 R prophage protein complement(1095792..1096031) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760684 YP_005232077.1 CDS STMMW_10182 NC_016854.1 1096074 1097183 R note the similarity to Gifsy-2 recT; pfam_scan;Pfam:PF03837; E()=2.2E-33;score=115.0;query 37-225;description=RecT; prophage protein complement(1096074..1097183) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760685 YP_005232078.1 CDS STMMW_10191 NC_016854.1 1097194 1100079 R pfam_scan;Pfam:PF06630; E()=1.1E-79;score=265.6;query 3-194;description=Exonuc_VIII; exodeoxyribonuclease complement(1097194..1100079) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760686 YP_005232079.1 CDS STMMW_10201 NC_016854.1 1100206 1100505 R prophage protein complement(1100206..1100505) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760687 YP_005232080.1 CDS STMMW_10211 NC_016854.1 1100527 1100685 R prophage protein complement(1100527..1100685) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760688 YP_005232081.1 CDS STMMW_10221 NC_016854.1 1100678 1100938 R prophage protein complement(1100678..1100938) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760689 YP_005232082.1 CDS STMMW_10231 NC_016854.1 1100988 1101398 R pfam_scan;Pfam:PF01381; E()=5.9E-9;score=35.1;query 13-67;description=HTH_3; regulatory protein complement(1100988..1101398) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760690 YP_005232083.1 CDS STMMW_10241 NC_016854.1 1101723 1102097 D pfam_scan;Pfam:PF05269; E()=2.0E-6;score=27.6;query 36-81;description=Phage_CII; regulatory protein 1101723..1102097 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760691 YP_005232084.1 CDS STMMW_10251 NC_016854.1 1102182 1103104 D pfam_scan;Pfam:PF04492; E()=9.5E-74;score=248.0;query 4-299;description=Phage_rep_O; prophage protein replication Protein O join(1102182..1102739,1102739..1103104) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760692 YP_005232085.1 CDS STMMW_10261 NC_016854.1 1103107 1103856 D pfam_scan;Pfam:PF01695; E()=3.1E-17;score=62.3;query100-198;description=IstB; ATPase involved in DNA replication initiation 1103107..1103856 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760693 YP_005232086.1 CDS STMMW_10271 NC_016854.1 1103867 1104214 D pfam_scan;Pfam:PF06163; E()=6.4E-44;score=148.6;query 1-115;description=DUF977; prophage protein 1103867..1104214 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760694 YP_005232087.1 CDS STMMW_10281 NC_016854.1 1104211 1104522 D prophage protein 1104211..1104522 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760695 YP_005232088.1 CDS STMMW_10291 NC_016854.1 1104600 1104890 D prophage protein 1104600..1104890 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760696 YP_005232089.1 CDS STMMW_10301 NC_016854.1 1105182 1105415 D pfam_scan;Pfam:PF06183; E()=1.3E-27;score=95.0;query13-77;description=DinI; prophage protein 1105182..1105415 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760697 YP_005232090.1 CDS STMMW_10311 NC_016854.1 1105831 1106433 D pfam_scan;Pfam:PF07105; E()=5.3E-96;score=319.1;query 1-199;description=DUF1367; prophage protein 1105831..1106433 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760698 YP_005232091.1 CDS STMMW_10321 NC_016854.1 1106642 1107253 D pfam_scan;Pfam:PF05766; E()=1.8E-61;score=206.2;query 1-202;description=NinG; prophage protein 1106642..1107253 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760699 YP_005232092.1 CDS STMMW_10331 NC_016854.1 1107250 1107396 D prophage protein 1107250..1107396 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760700 YP_005232093.1 CDS STMMW_10341 NC_016854.1 1107386 1108183 D pfam_scan;Pfam:PF03589; E()=5.7E-15;score=54.8;query14-109;description=Antiterm; putative antitermination protein 1107386..1108183 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760701 YP_005232094.1 CDS STMMW_10361 NC_016854.1 1108740 1108865 D prophage protein 1108740..1108865 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760703 YP_005232095.1 CDS STMMW_10371 NC_016854.1 1109001 1109450 R tmhmm; query 1-150; prophage protein complement(1109001..1109450) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760704 YP_005232096.1 CDS STMMW_10381 NC_016854.1 1109811 1110497 R pfam_scan;Pfam:PF07108; E()=3.2E-151;score=500.5;query 1-228;description=PipA; prophage protein complement(1109811..1110497) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760705 YP_005232097.1 CDS STMMW_10392 NC_016854.1 1110767 1111102 D pfam_scan;Pfam:PF05106; E()=5.3E-36;score=122.1;query 5-103;description=Phage_holin_3; tmhmm; query 1-112; putative holin 1110767..1111102 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760706 YP_005232098.1 CDS STMMW_10391 NC_016854.1 1111086 1111538 D pfam_scan;Pfam:PF00959; E()=2.2E-28;score=98.0;query33- 142;description=Phage_lysozyme; lysozyme 1111086..1111538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760707 YP_005232099.1 CDS STMMW_10401 NC_016854.1 1111535 1112035 D pfam_scan;Pfam:PF03245; E()=1.9E-60;score=202.7;query 8-155;description=Phage_lysis; prophage protein 1111535..1112035 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760708 YP_005232100.1 CDS STMMW_10411 NC_016854.1 1112243 1112776 D pfam_scan;Pfam:PF07278; E()=5.3E-66;score=220.9;query 9-158;description=DUF1441; prophage protein 1112243..1112776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760709 YP_005232101.1 CDS STMMW_10421 NC_016854.1 1112736 1114871 D pfam_scan;Pfam:PF05876; E()=3.8E-177;score=589.7;query 45-654;description=Terminase_GpA; phage terminase large subunit 1112736..1114871 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760710 YP_005232102.1 CDS STMMW_10422 NC_016854.1 1114868 1115074 D prophage protein 1114868..1115074 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760711 YP_005232103.1 CDS STMMW_10431 NC_016854.1 1115071 1116618 D pfam_scan;Pfam:PF05136; E()=4.9E-104;score=347.4;query 32-375;description=Phage_portal_2; prophage portal protein 1115071..1116618 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760712 YP_005232104.1 CDS STMMW_10441 NC_016854.1 1116569 1118623 D pfam_scan;Pfam:PF00574; E()=1.1E-36;score=125.7;query 52-190;description=CLP_protease; pfam_scan;Pfam:PF10124; E()=7.6E-6;score=24.9;query 541-616;description=Mu-like_gpT; Clp-like protease 1116569..1118623 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760713 YP_005232105.1 CDS STMMW_10451 NC_016854.1 1118714 1119037 D pfam_scan;Pfam:PF09956; E()=1.9E-33;score=114.5;query 2-106;description=DUF2190; putative RecA/RadA recombinase 1118714..1119037 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760714 YP_005232106.1 CDS STMMW_10461 NC_016854.1 1119030 1119329 D ATP-binding sugar transporter-like protein 1119030..1119329 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760715 YP_005232107.1 CDS STMMW_10471 NC_016854.1 1119310 1119876 D pfam_scan;Pfam:PF06763; E()=1.3E-70;score=236.7;query 3-188;description=Minor_tail_Z; minor tail protein 1119310..1119876 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760716 YP_005232108.1 CDS STMMW_10481 NC_016854.1 1119873 1120274 D pfam_scan;Pfam:PF06141; E()=4.8E-66;score=220.3;query 1-133;description=Phage_tail_U; minor tail protein 1119873..1120274 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760717 YP_005232109.1 CDS STMMW_10491 NC_016854.1 1120286 1121035 D pfam_scan;Pfam:PF02368; E()=5.7E-10;score=39.1;query165-242;description=Big_2; major tail protein 1120286..1121035 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760718 YP_005232110.1 CDS STMMW_10501 NC_016854.1 1121081 1121479 D pfam_scan;Pfam:PF06894; E()=2.5E-46;score=156.4;query 1-122;description=Phage_lambd_GpG; minor tail protein 1121081..1121479 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760719 YP_005232111.1 CDS STMMW_10511 NC_016854.1 1121542 1121805 D pfam_scan;Pfam:PF06223; E()=5.6E-28;score=96.7;query1-86;description=Phage_tail_T; minor tail protein 1121542..1121805 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760720 YP_005232112.1 CDS STMMW_10521 NC_016854.1 1121885 1124872 D pfam_scan;Pfam:PF09718; E()=5.9E-26;score=90.0;query772- 849;description=Tape_meas_lam_C; pfam_scan;Pfam:PF06791; E()=9.1E-59;score=197.9;query 193-391;description=TMP_2; tape measure protein 1121885..1124872 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760721 YP_005232113.1 CDS STMMW_10531 NC_016854.1 1124869 1125201 D pfam_scan;Pfam:PF05939; E()=2.1E-39;score=133.2;query 2-109;description=Phage_min_tail; minor tail protein 1124869..1125201 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760722 YP_005232114.1 CDS STMMW_10541 NC_016854.1 1125300 1125797 D pfam_scan;Pfam:PF06316; E()=4.8E-8;score=32.4;query 2-115;description=Ail_Lom; tmhmm; query 1-166; attachment and invasion protein 1125300..1125797 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760723 YP_005232115.1 CDS STMMW_10551 NC_016854.1 1125914 1126447 R pfam_scan;Pfam:PF00080; E()=3.4E-32;score=110.9;query 35-175;description=Sod_Cu; superoxide dismutase (Cu-Zn) complement(1125914..1126447) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760724 YP_005232116.1 CDS STMMW_10561 NC_016854.1 1126537 1127232 D pfam_scan;Pfam:PF05100; E()=1.2E-95;score=318.2;query 29-230;description=Phage_tail_L; minor tail protein 1126537..1127232 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760725 YP_005232117.1 CDS STMMW_10571 NC_016854.1 1127242 1127979 D pfam_scan;Pfam:PF00877; E()=4.5E-15;score=55.2;query109-222;description=NLPC_P60; tail assembly protein 1127242..1127979 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760726 YP_005232118.1 CDS STMMW_10581 NC_016854.1 1128039 1128581 D pfam_scan;Pfam:PF06805; E()=3.7E-57;score=192.6;query 1-145;description=Lambda_tail_I; tmhmm; query 1-181; tail assembly protein 1128039..1128581 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760727 YP_005232119.1 CDS STMMW_10591 NC_016854.1 1128653 1132003 D pfam_scan;Pfam:PF09327; E()=9.1E-26;score=89.5;query840-920;description=DUF1983; pfam_scan;Pfam:PF07495; E()=1.8E-4;score=20.9;query 669-708;description=Y_Y_Y; host specificity protein 1128653..1132003 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760728 YP_005232120.1 CDS STMMW_10601 NC_016854.1 1132338 1134776 D pfam_scan;Pfam:PF03406; E()=6.2E-19;score=67.0;query357- 399;description=Phage_fiber_2; pfam_scan;Pfam:PF08400; E()=5.1E-59;score=197.6;query 1-134;description=phage_tail_N; pfam_scan;Pfam:PF07484; E()=1.0E-5;score=24.8;query 632-678;description=Collar; tail fiber protein 1132338..1134776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760729 YP_005232121.1 CDS STMMW_10611 NC_016854.1 1134776 1135357 D pfam_scan;Pfam:PF02413; E()=2.0E-41;score=141.1;query 72-191;description=Caudo_TAP; tail fiber assembly protein; putative tail fiber assembly protein 1134776..1135357 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760730 YP_005232122.1 CDS STMMW_10641 NC_016854.1 1136755 1137471 R pfam_scan;Pfam:PF00665; E()=1.2E-13;score=50.8;query79-205;description=rve; IS26 transposase complement(1136755..1137471) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760733 YP_005232123.1 CDS STMMW_10661 NC_016854.1 1138277 1138903 R pfam_scan;Pfam:PF02586; E()=1.3E-48;score=164.5;query 1-179;description=DUF159; prophage protein complement(1138277..1138903) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760735 YP_005232124.1 CDS STMMW_10671 NC_016854.1 1138972 1139259 R prophage protein complement(1138972..1139259) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760736 YP_005232125.1 CDS STMMW_10681 NC_016854.1 1139256 1139942 R prophage protein complement(1139256..1139942) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760737 YP_005232126.1 CDS STMMW_10691 NC_016854.1 1140213 1140404 R pfam_scan;Pfam:PF06183; E()=4.8E-9;score=35.8;query 16-61;description=DinI; Homolog of msgA complement(1140213..1140404) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760738 YP_005232127.1 CDS STMMW_10701 NC_016854.1 1140831 1143443 D pfam_scan;Pfam:PF01433; E()=3.0E-59;score=200.6;query 91-384;description=Peptidase_M1; aminopeptidase N 1140831..1143443 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760739 YP_005232128.1 CDS STMMW_10711 NC_016854.1 1143651 1144661 D pfam_scan;Pfam:PF01180; E()=3.8E-86;score=288.1;query 47-335;description=DHO_dh; dihydroorotate dehydrogenase 1143651..1144661 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760740 YP_005232129.1 CDS STMMW_10721 NC_016854.1 1144827 1145369 D pfam_scan;Pfam:PF07126; E()=5.2E-55;score=184.8;query 21-169;description=DUF1379; hypothetical protein 1144827..1145369 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760741 YP_005232130.1 CDS STMMW_10731 NC_016854.1 1145366 1146475 R pfam_scan;Pfam:PF03476; E()=8.2E-31;score=106.0;query 2-116;description=MOSC_N; pfam_scan;Pfam:PF00111; E()=1.1E-15;score=56.7;query292-362;description=Fer2; pfam_scan;Pfam:PF03473; E()=4.7E-29;score=100.2;query 132-263;description=MOSC; hypothetical protein complement(1145366..1146475) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760742 YP_005232131.1 CDS STMMW_10741 NC_016854.1 1146574 1148682 D pfam_scan;Pfam:PF01170; E()=4.8E-50;score=168.8;query 162-375;description=UPF0020; pfam_scan;Pfam:PF10672; E()=7.9E-22;score=77.2;query475- 658;description=Methyltrans_SAM; pfam_scan;Pfam:PF02926; E()=2.9E-13;score=49.3;query56-153;description=THUMP; hypothetical protein 1146574..1148682 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760743 YP_005232132.1 CDS STMMW_10751 NC_016854.1 1148695 1150602 D pfam_scan;Pfam:PF00005; E()=3.7E-34;score=118.2;query 30-214;description=ABC_tran; ABC transporter ATP-binding protein 1148695..1150602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760744 YP_005232133.1 CDS STMMW_10761 NC_016854.1 1150617 1151870 D pfam_scan;Pfam:PF04403; E()=2.8E-35;score=120.6;query 49-203;description=PqiA; tmhmm; query 1-418; putative inner membrane protein 1150617..1151870 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760745 YP_005232134.1 CDS STMMW_10771 NC_016854.1 1151875 1153515 D pfam_scan;Pfam:PF02470; E()=1.1E-10;score=41.2;query42-133;description=MCE; tmhmm; query 1-547; hypothetical protein 1151875..1153515 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760746 YP_005232135.1 CDS STMMW_10781 NC_016854.1 1153512 1154075 D pfam_scan;Pfam:PF03886; E()=1.4E-44;score=151.0;query 26-180;description=DUF330; putative lipoprotein 1153512..1154075 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760747 YP_005232136.1 CDS STMMW_10791 NC_016854.1 1154331 1154498 D pfam_scan;Pfam:PF04957; E()=1.0E-28;score=97.9;query1-53;description=RMF; ribosome modulation factor (protein E) 1154331..1154498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760748 YP_005232137.1 CDS STMMW_10801 NC_016854.1 1154598 1155116 R pfam_scan;Pfam:PF07977; E()=4.5E-44;score=148.6;query 29-158;description=FabA; D-3-hydroxydecanoyl-(acyl carrier-protein) complement(1154598..1155116) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760749 YP_005232138.1 CDS STMMW_10811 NC_016854.1 1155185 1156771 R pfam_scan;Pfam:PF05362; E()=8.3E-11;score=41.5;query377-483;description=Lon_C; hypothetical protein complement(1155185..1156771) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760750 YP_005232139.1 CDS STMMW_10821 NC_016854.1 1157131 1157583 D pfam_scan;Pfam:PF06303; E()=3.3E-73;score=244.0;query 1-147;description=MatP; hypothetical protein 1157131..1157583 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760751 YP_005232140.1 CDS STMMW_10831 NC_016854.1 1157655 1158707 R pfam_scan;Pfam:PF00691; E()=6.0E-23;score=80.6;query226-318;description=OmpA; pfam_scan;Pfam:PF01389; E()=2.9E-85;score=284.4;query 6-199;description=OmpA_membrane; outer membrane protein A complement(1157655..1158707) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760752 YP_005232141.1 CDS STMMW_10841 NC_016854.1 1159064 1159573 R pfam_scan;Pfam:PF03846; E()=6.7E-60;score=199.6;query 3-119;description=SulA; cell division inhibitor complement(1159064..1159573) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760753 YP_005232142.1 CDS STMMW_10851 NC_016854.1 1159790 1160395 D pfam_scan;Pfam:PF04994; E()=1.6E-26;score=91.4;query116-194;description=TfoX_C; pfam_scan;Pfam:PF04993; E()=1.5E-26;score=91.5;query13-107;description=TfoX_N; hypothetical protein 1159790..1160395 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760754 YP_005232143.1 CDS STMMW_10861 NC_016854.1 1160382 1162535 R pfam_scan;Pfam:PF04632; E()=4.2E-11;score=41.7;query393-682;description=FUSC; tmhmm; query 1-718; hypothetical protein complement(1160382..1162535) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760755 YP_005232144.1 CDS STMMW_10871 NC_016854.1 1162554 1163000 R pfam_scan;Pfam:PF03733; E()=1.1E-12;score=47.4;query3-55;description=DUF307; tmhmm; query 1-149; hypothetical protein complement(1162554..1163000) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760756 YP_005232145.1 CDS STMMW_10881 NC_016854.1 1163124 1165178 D pfam_scan;Pfam:PF00580; E()=3.4E-59;score=200.4;query 197-543;description=UvrD-helicase; helicase IV (75 kD helicase) 1163124..1165178 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760757 YP_005232146.1 CDS STMMW_10891 NC_016854.1 1165214 1165672 R pfam_scan;Pfam:PF02142; E()=8.8E-14;score=50.9;query26-118;description=MGS; methylglyoxal synthase complement(1165214..1165672) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760758 YP_005232147.1 CDS STMMW_10901 NC_016854.1 1165767 1166429 R pfam_scan;Pfam:PF09829; E()=5.7E-48;score=162.8;query 22-213;description=DUF2057; hypothetical protein complement(1165767..1166429) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760759 YP_005232148.1 CDS STMMW_10911 NC_016854.1 1166600 1167016 D pfam_scan;Pfam:PF02629; E()=4.8E-5;score=23.3;query 14-100;description=CoA_binding; hypothetical protein 1166600..1167016 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760760 YP_005232149.1 CDS STMMW_10921 NC_016854.1 1167061 1167378 R pfam_scan;Pfam:PF08755; E()=4.9E-25;score=87.1;query4-101;description=YccV-like; hypothetical protein complement(1167061..1167378) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760761 YP_005232150.1 CDS STMMW_10931 NC_016854.1 1167436 1168647 R pfam_scan;Pfam:PF10672; E()=1.5E-29;score=102.5;query 181-378;description=Methyltrans_SAM; hypothetical protein complement(1167436..1168647) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760762 YP_005232151.1 CDS STMMW_10941 NC_016854.1 1168862 1169410 D pfam_scan;Pfam:PF01161; E()=1.1E-41;score=141.5;query 43-181;description=PBP; hypothetical protein 1168862..1169410 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760763 YP_005232152.1 CDS STMMW_10951 NC_016854.1 1169436 1170215 D pfam_scan;Pfam:PF00165; E()=1.6E-8;score=33.9;query 221-259;description=HTH_AraC; putative transcriptional regulator 1169436..1170215 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760764 YP_005232153.1 CDS STMMW_10961 NC_016854.1 1170264 1170545 D pfam_scan;Pfam:PF00708; E()=1.1E-28;score=98.8;query1- 92;description=Acylphosphatase; putative acylphosphatase 1170264..1170545 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760765 YP_005232154.1 CDS STMMW_10971 NC_016854.1 1170542 1170871 R pfam_scan;Pfam:PF04358; E()=4.3E-49;score=164.5;query 2-109;description=DsrC; putative sulfite reductase complement(1170542..1170871) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760766 YP_005232155.1 CDS STMMW_10981 NC_016854.1 1170958 1171536 R pfam_scan;Pfam:PF01027; E()=7.1E-61;score=205.1;query 2-187;description=UPF0005; tmhmm; query 1-193; hypothetical protein complement(1170958..1171536) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760767 YP_005232156.1 CDS STMMW_10991 NC_016854.1 1172238 1172918 R pfam_scan;Pfam:PF07108; E()=2.1E-144;score=478.1;query 1-226;description=PipA; hypothetical protein complement(1172238..1172918) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760768 YP_005232157.1 CDS STMMW_11001 NC_016854.1 1173139 1174014 R pfam_scan;Pfam:PF00805; E()=3.0E-8;score=32.8;query 155-192;description=Pentapeptide; hypothetical protein complement(1173139..1174014) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760769 YP_005232158.1 CDS STMMW_11011 NC_016854.1 1174232 1174552 D inner membrane protein 1174232..1174552 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760770 YP_005232159.1 CDS STMMW_11021 NC_016854.1 1174562 1174903 R pfam_scan;Pfam:PF07824; E()=1.9E-54;score=181.8;query 4-113;description=Chaperone_III; cell invasion protein complement(1174562..1174903) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760771 YP_005232160.1 CDS STMMW_11031 NC_016854.1 1174920 1176605 R pfam_scan;Pfam:PF05925; E()=0.0;score=1105.4;query 1-559;description=IpgD; cell invasion protein complement(1174920..1176605) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760772 YP_005232161.1 CDS STMMW_11051 NC_016854.1 1178247 1179611 R pfam_scan;Pfam:PF02518; E()=5.2E-21;score=74.1;query346-449;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=2.2E-12;score=46.3;query237-301;description=HisKA; tmhmm; query 1-455; histidine kinase complement(1178247..1179611) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760774 YP_005232162.1 CDS STMMW_11061 NC_016854.1 1179604 1180350 R pfam_scan;Pfam:PF00486; E()=8.8E-26;score=88.7;query165- 240;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=4.6E-30;score=103.6;query 25-134;description=Response_reg; response regulator complement(1179604..1180350) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760775 YP_005232163.1 CDS STMMW_11071 NC_016854.1 1180420 1180830 D pfam_scan;Pfam:PF00576; E()=5.6E-41;score=138.8;query 27-135;description=Transthyretin; tmhmm; query 1-137; hypothetical protein 1180420..1180830 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760776 YP_005232164.1 CDS STMMW_11081 NC_016854.1 1181163 1181675 R pfam_scan;Pfam:PF01613; E()=1.8E-34;score=118.1;query 14-162;description=Flavin_Reduct; 4-hydroxyphenylacetate 3-monooxygenase coupling protein complement(1181163..1181675) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760777 YP_005232165.1 CDS STMMW_11091 NC_016854.1 1181693 1183255 R pfam_scan;Pfam:PF11794; E()=7.4E-103;score=343.0;query 15-281;description=HpaB_N; pfam_scan;Pfam:PF03241; E()=1.5E-76;score=255.6;query 287-491;description=HpaB; 4-hydroxyphenylacetate 3-monooxygenase complement(1181693..1183255) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760778 YP_005232166.1 CDS STMMW_11101 NC_016854.1 1183473 1183913 R pfam_scan;Pfam:PF01047; E()=1.5E-13;score=49.7;query29-89;description=MarR; homoprotocatechuate degradative operon repressor complement(1183473..1183913) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760779 YP_005232167.1 CDS STMMW_11111 NC_016854.1 1184188 1185477 D pfam_scan;Pfam:PF01557; E()=3.8E-51;score=173.2;query 5-204;description=FAA_hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 1184188..1185477 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760780 YP_005232168.1 CDS STMMW_11121 NC_016854.1 1185474 1186940 D pfam_scan;Pfam:PF00171; E()=1.1E-177;score=590.4;query 17-474;description=Aldedh; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 1185474..1186940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760781 YP_005232169.1 CDS STMMW_11131 NC_016854.1 1186942 1187793 D pfam_scan;Pfam:PF02900; E()=5.9E-63;score=211.9;query 8-279;description=LigB; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1186942..1187793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760782 YP_005232170.1 CDS STMMW_11141 NC_016854.1 1187803 1188183 D pfam_scan;Pfam:PF02962; E()=1.5E-69;score=231.0;query 2-125;description=CHMI; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1187803..1188183 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760783 YP_005232171.1 CDS STMMW_11151 NC_016854.1 1188326 1189129 D pfam_scan;Pfam:PF01557; E()=2.2E-23;score=82.5;query59- 267;description=FAA_hydrolase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1188326..1189129 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760784 YP_005232172.1 CDS STMMW_11161 NC_016854.1 1189140 1189931 D pfam_scan;Pfam:PF03328; E()=1.9E-66;score=223.2;query 15-241;description=HpcH_HpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1189140..1189931 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760785 YP_005232173.1 CDS STMMW_11171 NC_016854.1 1190003 1191379 D pfam_scan;Pfam:PF07690; E()=1.6E-48;score=165.5;query 40-413;description=MFS_1; tmhmm; query 1-459; putative 4-hydroxyphenylacetate permease 1190003..1191379 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760786 YP_005232174.1 CDS STMMW_11181 NC_016854.1 1191389 1192285 D pfam_scan;Pfam:PF02311; E()=6.4E-8;score=32.1;query 33-151;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=3.6E-6;score=26.5;query 253-290;description=HTH_AraC; 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein 1191389..1192285 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760787 YP_005232175.1 CDS STMMW_11191 NC_016854.1 1192320 1193237 D pfam_scan;Pfam:PF00753; E()=1.7E-12;score=46.8;query49- 212;description=Lactamase_B; hypothetical protein 1192320..1193237 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760788 YP_005232176.1 CDS STMMW_11201 NC_016854.1 1193645 1194007 R hypothetical protein complement(1193645..1194007) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760789 YP_005232177.1 CDS STMMW_11211 NC_016854.1 1194661 1194966 R hypothetical protein complement(1194661..1194966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760790 YP_005232178.1 CDS STMMW_11221 NC_016854.1 1194966 1195886 R pfam_scan;Pfam:PF01556; E()=2.9E-24;score=84.4;query190-282;description=DnaJ_C; pfam_scan;Pfam:PF00226; E()=1.1E-23;score=82.2;query5-66;description=DnaJ; curved DNA-binding protein complement(1194966..1195886) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760791 YP_005232179.1 CDS STMMW_11231 NC_016854.1 1196006 1196200 R hypothetical protein complement(1196006..1196200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760792 YP_005232180.1 CDS STMMW_11240 NC_016854.1 1196121 1196483 D tmhmm; query 1-121; suppression of copper sensitivity: putative copper binding protein 1196121..1196483 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760793 YP_005232181.1 CDS STMMW_11241 NC_016854.1 1196532 1198418 D pfam_scan;Pfam:PF02683; E()=1.1E-10;score=41.1;query285-492;description=DsbD; pfam_scan;Pfam:PF03190; E()=4.7E-6;score=26.0;query 505-562;description=DUF255; tmhmm; query 1-629; membrane protein, suppressor for copper-sensitivity B precursor 1196532..1198418 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760794 YP_005232182.1 CDS STMMW_11251 NC_016854.1 1198415 1199038 D pfam_scan;Pfam:PF01323; E()=2.2E-29;score=101.9;query 57-196;description=DSBA; secreted protein, suppressor for copper-sensitivity C precursor 1198415..1199038 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760795 YP_005232183.1 CDS STMMW_11261 NC_016854.1 1199028 1199534 D pfam_scan;Pfam:PF08534; E()=3.3E-16;score=59.0;query36-147;description=Redoxin; tmhmm; query 1-169; secreted protein, suppressor for copper-sensitivity D 1199028..1199534 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760796 YP_005232184.1 CDS STMMW_11271 NC_016854.1 1199667 1200908 D pfam_scan;Pfam:PF00328; E()=1.6E-49;score=168.5;query 30-359;description=Acid_phosphat_A; glucose-1-phosphatase precursor (G1Pase), secreted 1199667..1200908 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760797 YP_005232185.1 CDS STMMW_11281 NC_016854.1 1200942 1201169 R hypothetical protein complement(1200942..1201169) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760798 YP_005232186.1 CDS STMMW_11291 NC_016854.1 1201190 1201786 R pfam_scan;Pfam:PF00258; E()=1.0E-14;score=54.6;query6- 135;description=Flavodoxin_1; trp repressor binding protein complement(1201190..1201786) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760799 YP_005232187.1 CDS STMMW_11301 NC_016854.1 1202171 1202338 D pfam_scan;Pfam:PF10685; E()=4.0E-10;score=38.8;query10-31;description=KGG; hypothetical protein 1202171..1202338 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760800 YP_005232188.1 CDS STMMW_11311 NC_016854.1 1202475 1203113 D pfam_scan;Pfam:PF08362; E()=1.1E-58;score=196.3;query 70-211;description=TetR_C_3; pfam_scan;Pfam:PF00440; E()=3.5E-14;score=51.7;query23-69;description=TetR_N; putative transcriptional regulator 1202475..1203113 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760801 YP_005232189.1 CDS STMMW_11321 NC_016854.1 1203110 1203505 R pfam_scan;Pfam:PF07007; E()=3.7E-26;score=90.6;query21-112;description=DUF1311; hypothetical protein complement(1203110..1203505) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760802 YP_005232190.1 CDS STMMW_11331 NC_016854.1 1203564 1207526 R pfam_scan;Pfam:PF00171; E()=2.3E-105;score=352.1;query 659-1103;description=Aldedh; pfam_scan;Pfam:PF01619; E()=3.7E-138;score=460.0;query 229-572;description=Pro_dh; proline dehydrogenase (proline oxidase) complement(1203564..1207526) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760803 YP_005232191.1 CDS STMMW_11341 NC_016854.1 1207948 1209456 D pfam_scan;Pfam:PF00474; E()=6.2E-148;score=492.4;query 35-437;description=SSF; tmhmm; query 1-503; sodium/proline symporter 1207948..1209456 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760804 YP_005232192.1 CDS STMMW_11351 NC_016854.1 1210283 1211137 D pfam_scan;Pfam:PF02562; E()=1.1E-78;score=262.8;query 79-283;description=PhoH; PhoH protein (phosphate starvation-inducible protein PsiH) 1210283..1211137 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760805 YP_005232193.1 CDS STMMW_11361 NC_016854.1 1211243 1212124 R pfam_scan;Pfam:PF01380; E()=1.6E-21;score=76.2;query140-268;description=SIS; pfam_scan;Pfam:PF01418; E()=2.7E-25;score=88.0;query13-117;description=HTH_6; putative transcriptional regulator complement(1211243..1212124) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760806 YP_005232194.1 CDS STMMW_11371 NC_016854.1 1212409 1213905 R pfam_scan;Pfam:PF00474; E()=4.7E-42;score=143.7;query 38-442;description=SSF; tmhmm; query 1-499; putative sodium/glucose cotransporter complement(1212409..1213905) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760807 YP_005232195.1 CDS STMMW_11381 NC_016854.1 1214242 1214922 R pfam_scan;Pfam:PF04131; E()=2.6E-85;score=284.3;query 35-225;description=NanE; hypothetical protein complement(1214242..1214922) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760808 YP_005232196.1 CDS STMMW_11391 NC_016854.1 1215428 1216588 D pfam_scan;Pfam:PF01344; E()=9.0E-8;score=30.9;query 86-133;description=Kelch_1; tmhmm; query 1-387; hypothetical protein 1215428..1216588 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760809 YP_005232197.1 CDS STMMW_11401 NC_016854.1 1216634 1217326 D pfam_scan;Pfam:PF06178; E()=6.6E-85;score=283.7;query 16-230;description=KdgM; hypothetical protein 1216634..1217326 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760810 YP_005232198.1 CDS STMMW_11411 NC_016854.1 1217609 1218889 D pfam_scan;Pfam:PF00083; E()=6.6E-40;score=136.6;query 20-410;description=Sugar_tr; tmhmm; query 1-427; putative transporter 1217609..1218889 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760811 YP_005232199.1 CDS STMMW_11421 NC_016854.1 1218900 1220006 D pfam_scan;Pfam:PF02894; E()=2.3E-18;score=65.7;query131- 242;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=2.0E-31;score=108.2;query 4-119;description=GFO_IDH_MocA; putative oxidoreductase 1218900..1220006 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760812 YP_005232200.1 CDS STMMW_11431 NC_016854.1 1220850 1221788 D pfam_scan;Pfam:PF02826; E()=2.6E-41;score=140.8;query 105-277;description=2-Hacid_dh_C; putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region 1220850..1221788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760813 YP_005232201.1 CDS STMMW_11441 NC_016854.1 1221873 1222610 D pfam_scan;Pfam:PF02811; E()=2.0E-31;score=109.3;query 4-195;description=PHP; hypothetical protein 1221873..1222610 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760814 YP_005232202.1 CDS STMMW_11451 NC_016854.1 1222634 1223188 D pfam_scan;Pfam:PF02613; E()=2.4E-17;score=62.6;query33- 150;description=Nitrate_red_del; hypothetical protein 1222634..1223188 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760815 YP_005232203.1 CDS STMMW_11461 NC_016854.1 1223241 1223783 D pfam_scan;Pfam:PF06496; E()=5.7E-59;score=198.1;query 17-170;description=DUF1097; tmhmm; query 1-181; hypothetical protein 1223241..1223783 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760816 YP_005232204.1 CDS STMMW_11471 NC_016854.1 1223822 1224568 R pfam_scan;Pfam:PF03783; E()=1.2E-71;score=239.9;query 12-226;description=CsgG; assembly/transport component in curli production complement(1223822..1224568) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760817 YP_005232205.1 CDS STMMW_11481 NC_016854.1 1224682 1225098 R pfam_scan;Pfam:PF10614; E()=9.2E-46;score=154.8;query 4-133;description=Tafi-CsgF; tmhmm; query 1-139; assembly/transport component in curli production complement(1224682..1225098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760818 YP_005232206.1 CDS STMMW_11491 NC_016854.1 1225125 1225520 R pfam_scan;Pfam:PF10627; E()=4.8E-37;score=126.0;query 28-131;description=CsgE; assembly/transport component in curli production complement(1225125..1225520) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760819 YP_005232207.1 CDS STMMW_11501 NC_016854.1 1225525 1226175 R pfam_scan;Pfam:PF00196; E()=4.2E-19;score=67.3;query156-210;description=GerE; csg operon transcriptional regulator protein complement(1225525..1226175) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760820 YP_005232208.1 CDS STMMW_11511 NC_016854.1 1226930 1227385 D pfam_scan;Pfam:PF07012; E()=6.3E-11;score=41.4;query53-86;description=Curlin_rpt; nucleation component of curlin monomers 1226930..1227385 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760821 YP_005232209.1 CDS STMMW_11521 NC_016854.1 1227427 1227882 D pfam_scan;Pfam:PF07012; E()=1.9E-9;score=36.7;query 40-74;description=Curlin_rpt; major curlin subunit precursor 1227427..1227882 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760822 YP_005232210.1 CDS STMMW_11531 NC_016854.1 1227944 1228270 D pfam_scan;Pfam:PF10610; E()=5.4E-58;score=193.1;query 5-107;description=Tafi-CsgC; curli prooduction protein 1227944..1228270 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760823 YP_005232211.1 CDS STMMW_11541 NC_016854.1 1228401 1228721 D tmhmm; query 1-107; hypothetical protein 1228401..1228721 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760824 YP_005232212.1 CDS STMMW_11551 NC_016854.1 1228812 1229351 D pfam_scan;Pfam:PF01661; E()=1.0E-49;score=167.1;query 21-137;description=Macro; hypothetical protein 1228812..1229351 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760825 YP_005232213.1 CDS STMMW_11561 NC_016854.1 1229290 1230774 D hypothetical protein 1229290..1230774 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760826 YP_005232214.1 CDS STMMW_11571 NC_016854.1 1230791 1231945 R pfam_scan;Pfam:PF01757; E()=3.5E-41;score=140.9;query 11-356;description=Acyl_transf_3; tmhmm; query 1-385; Glucans biosynthesis protein C complement(1230791..1231945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760827 YP_005232215.1 CDS STMMW_11581 NC_016854.1 1232217 1233752 D pfam_scan;Pfam:PF04349; E()=1.4E-254;score=844.3;query 23-508;description=MdoG; periplasmic glucans biosynthesis protein MdoG precursor 1232217..1233752 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760828 YP_005232216.1 CDS STMMW_11591 NC_016854.1 1233745 1236288 D pfam_scan;Pfam:PF00535; E()=6.7E-10;score=38.3;query247- 429;description=Glycos_transf_2; tmhmm; query 1-848; periplasmic glucans biosynthesis protein 1233745..1236288 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760829 YP_005232217.1 CDS STMMW_11601 NC_016854.1 1236362 1236589 D pfam_scan;Pfam:PF07119; E()=4.1E-19;score=67.7;query9-69;description=DUF1375; putative lipoprotein 1236362..1236589 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760830 YP_005232218.1 CDS STMMW_11611 NC_016854.1 1236590 1236964 R multicopy suppressor of SecY; acidic protein MsyB complement(1236590..1236964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760831 YP_005232219.1 CDS STMMW_11621 NC_016854.1 1237046 1238260 R pfam_scan;Pfam:PF07690; E()=7.3E-37;score=127.1;query 18-258;description=MFS_1; tmhmm; query 1-405; putative membrane transport protein complement(1237046..1238260) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760832 YP_005232220.1 CDS STMMW_11631 NC_016854.1 1238415 1239335 R pfam_scan;Pfam:PF03279; E()=1.8E-117;score=391.0;query 5-297;description=Lip_A_acyltrans; tmhmm; query 1-307; lipid A biosynthesis lauroyl acyltransferase complement(1238415..1239335) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760833 YP_005232221.1 CDS STMMW_11641 NC_016854.1 1239555 1240607 D pfam_scan;Pfam:PF00581; E()=8.7E-18;score=63.8;query138-232;description=Rhodanese; hypothetical protein 1239555..1240607 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760834 YP_005232222.1 CDS STMMW_11651 NC_016854.1 1240659 1241234 R pfam_scan;Pfam:PF04264; E()=8.7E-48;score=162.0;query 25-186;description=YceI; hypothetical protein complement(1240659..1241234) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760835 YP_005232223.1 CDS STMMW_11661 NC_016854.1 1241231 1241803 R pfam_scan;Pfam:PF00033; E()=3.4E-34;score=117.6;query 8-180;description=Cytochrom_B_N; tmhmm; query 1-191; cytochrome b561 homolog 2 complement(1241231..1241803) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760836 YP_005232224.1 CDS STMMW_11681 NC_016854.1 1242220 1243338 R pfam_scan;Pfam:PF01266; E()=5.8E-56;score=190.0;query 4-351;description=DAO; N-methyl-L-tryptophan oxidase; putative sarcosine oxidase; MTOX complement(1242220..1243338) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760837 YP_005232225.1 CDS STMMW_11691 NC_016854.1 1243451 1243705 R hypothetical protein complement(1243451..1243705) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760838 YP_005232226.1 CDS STMMW_11701 NC_016854.1 1243995 1244240 R pfam_scan;Pfam:PF06183; E()=9.8E-26;score=89.0;query13-78;description=DinI; damage-inducible protein complement(1243995..1244240) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760839 YP_005232227.1 CDS STMMW_11711 NC_016854.1 1244314 1245360 R dihydroorotase; DHOase complement(1244314..1245360) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760840 YP_005232228.1 CDS STMMW_11721 NC_016854.1 1245465 1246025 R pfam_scan;Pfam:PF07273; E()=7.9E-64;score=214.2;query 1-179;description=DUF1439; hypothetical protein complement(1245465..1246025) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760841 YP_005232229.1 CDS STMMW_11731 NC_016854.1 1246150 1246797 R pfam_scan;Pfam:PF04399; E()=3.0E-51;score=172.2;query 84-215;description=Glutaredoxin2_C; glutaredoxin complement(1246150..1246797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760842 YP_005232230.1 CDS STMMW_11741 NC_016854.1 1246861 1248069 R pfam_scan;Pfam:PF07690; E()=1.4E-26;score=93.3;query19-233;description=MFS_1; tmhmm; query 1-403; putative membrane transporter complement(1246861..1248069) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760843 YP_005232231.1 CDS STMMW_11751 NC_016854.1 1248306 1248890 D pfam_scan;Pfam:PF00583; E()=2.3E-11;score=43.2;query84- 162;description=Acetyltransf_1; ribosomal-protein-alanine acetyltransferase 1248306..1248890 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760844 YP_005232232.1 CDS STMMW_11761 NC_016854.1 1248926 1249573 D pfam_scan;Pfam:PF04337; E()=3.4E-65;score=217.8;query 5-158;description=DUF480; hypothetical protein 1248926..1249573 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760845 YP_005232233.1 CDS STMMW_11771 NC_016854.1 1249575 1250498 D pfam_scan;Pfam:PF02894; E()=1.8E-7;score=30.6;query 142-226;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=3.2E-29;score=101.1;query 4-121;description=GFO_IDH_MocA; putative virulence factor MviM 1249575..1250498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760846 YP_005232234.1 CDS STMMW_11781 NC_016854.1 1250763 1252337 D pfam_scan;Pfam:PF03023; E()=5.0E-163;score=542.6;query 41-491;description=MVIN; tmhmm; query 1-525; virulence factor MviN 1250763..1252337 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760847 YP_005232235.1 CDS STMMW_11791 NC_016854.1 1252419 1252841 R pfam_scan;Pfam:PF05130; E()=3.4E-28;score=97.7;query1-129;description=FlgN; flagella synthesis protein FlgN complement(1252419..1252841) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760848 YP_005232236.1 CDS STMMW_11801 NC_016854.1 1252846 1253139 R pfam_scan;Pfam:PF04316; E()=1.1E-12;score=47.3;query40-89;description=FlgM; negative regulator of flagellin synthesis (anti-sigma factor) complement(1252846..1253139) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760849 YP_005232237.1 CDS STMMW_11811 NC_016854.1 1253231 1253890 R pfam_scan;Pfam:PF08666; E()=4.0E-11;score=42.2;query96-157;description=SAF; flagellar basal body P-ring protein FlgA precursor complement(1253231..1253890) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760850 YP_005232238.1 CDS STMMW_11821 NC_016854.1 1254047 1254463 D pfam_scan;Pfam:PF00460; E()=2.0E-11;score=43.0;query9-39;description=Flg_bb_rod; putative flagellar basal-body rod protein FlgB (proximal rod protein) 1254047..1254463 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760851 YP_005232239.1 CDS STMMW_11831 NC_016854.1 1254467 1254871 D pfam_scan;Pfam:PF06429; E()=6.6E-13;score=47.6;query94-132;description=DUF1078; pfam_scan;Pfam:PF00460; E()=1.9E-9;score=36.7;query 7-37;description=Flg_bb_rod; putative flagellar basal-body rod protein FlgC (proximal rod protein) 1254467..1254871 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760852 YP_005232240.1 CDS STMMW_11841 NC_016854.1 1254883 1255581 D pfam_scan;Pfam:PF03963; E()=8.3E-39;score=132.3;query 12-151;description=FlgD; flagellar hook formation protein FlgD 1254883..1255581 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760853 YP_005232241.1 CDS STMMW_11851 NC_016854.1 1255608 1256819 D pfam_scan;Pfam:PF06429; E()=5.9E-14;score=51.0;query364-402;description=DUF1078; pfam_scan;Pfam:PF07559; E()=1.7E-25;score=89.7;query170-284;description=FlaE; pfam_scan;Pfam:PF00460; E()=5.0E-11;score=41.8;query4-33;description=Flg_bb_rod; flagellar hook protein FlgE 1255608..1256819 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760854 YP_005232242.1 CDS STMMW_11861 NC_016854.1 1256840 1257595 D pfam_scan;Pfam:PF06429; E()=7.5E-11;score=41.1;query209-247;description=DUF1078; pfam_scan;Pfam:PF00460; E()=7.4E-10;score=38.1;query5-35;description=Flg_bb_rod; putative flagellar basal-body rod protein FlgF (proximal rod protein) 1256840..1257595 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759575 YP_005232243.1 CDS STMMW_11871 NC_016854.1 1257609 1258391 D pfam_scan;Pfam:PF06429; E()=1.3E-15;score=56.3;query222-260;description=DUF1078; pfam_scan;Pfam:PF00460; E()=2.3E-13;score=49.2;query5-35;description=Flg_bb_rod; flagellar basal-body rod protein FlgG (distal rod protein) 1257609..1258391 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759576 YP_005232244.1 CDS STMMW_11881 NC_016854.1 1258446 1259144 D pfam_scan;Pfam:PF02107; E()=3.4E-66;score=221.8;query 46-231;description=FlgH; tmhmm; query 1-233; flagellar L-ring protein; Basal body L-ring protein 1258446..1259144 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759577 YP_005232245.1 CDS STMMW_11891 NC_016854.1 1259156 1260253 D pfam_scan;Pfam:PF02119; E()=2.2E-144;score=480.4;query 21-365;description=FlgI; flagellar P-ring protein; Basal body P-ring protein 1259156..1260253 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759578 YP_005232246.1 CDS STMMW_11901 NC_016854.1 1260253 1261203 D pfam_scan;Pfam:PF10135; E()=2.1E-20;score=71.7;query50-97;description=Rod-binding; pfam_scan;Pfam:PF01832; E()=1.1E-42;score=145.1;query 163-298;description=Glucosaminidase; flagellar protein FlgJ 1260253..1261203 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759579 YP_005232247.1 CDS STMMW_11911 NC_016854.1 1261268 1262929 D pfam_scan;Pfam:PF06429; E()=2.6E-9;score=36.2;query 514-552;description=DUF1078; pfam_scan;Pfam:PF00460; E()=1.1E-8;score=34.3;query 5-35;description=Flg_bb_rod; flagellar hook-associated protein 1 1261268..1262929 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759580 YP_005232248.1 CDS STMMW_11921 NC_016854.1 1262944 1263897 D pfam_scan;Pfam:PF00669; E()=2.9E-31;score=107.8;query 3-141;description=Flagellin_N; flagellar hook-associated protein 3 1262944..1263897 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759581 YP_005232249.1 CDS STMMW_11931 NC_016854.1 1264154 1267357 R pfam_scan;Pfam:PF10150; E()=1.1E-103;score=346.1;query 121-392;description=RNase_E_G; pfam_scan;Pfam:PF00575; E()=3.7E-12;score=45.8;query36-118;description=S1; ribonuclease E complement(1264154..1267357) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759582 YP_005232250.1 CDS STMMW_11941 NC_016854.1 1267493 1267741 D pfam_scan;Pfam:PF10848; E()=1.2E-55;score=184.2;query 1-82;description=DUF2655; hypothetical protein 1267493..1267741 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759583 YP_005232251.1 CDS STMMW_11951 NC_016854.1 1267931 1268890 D pfam_scan;Pfam:PF01479; E()=2.7E-9;score=36.1;query 20-66;description=S4; pfam_scan;Pfam:PF00849; E()=5.2E-31;score=107.6;query 101-249;description=PseudoU_synth_2; ribosomal large subunit pseudouridine synthase C 1267931..1268890 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759584 YP_005232252.1 CDS STMMW_11961 NC_016854.1 1269046 1269789 D pfam_scan;Pfam:PF11254; E()=1.2E-80;score=269.5;query 2-243;description=DUF3053; putative inner membrane lipoprotein 1269046..1269789 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759585 YP_005232253.1 CDS STMMW_11971 NC_016854.1 1269995 1270219 D hypothetical protein 1269995..1270219 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759586 YP_005232254.1 CDS STMMW_11981 NC_016854.1 1270291 1270875 R pfam_scan;Pfam:PF02545; E()=4.9E-62;score=208.5;query 3-189;description=Maf; hypothetical protein complement(1270291..1270875) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759587 YP_005232255.1 CDS STMMW_11991 NC_016854.1 1271073 1271594 D pfam_scan;Pfam:PF02620; E()=5.2E-25;score=87.6;query61-171;description=DUF177; hypothetical protein 1271073..1271594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759588 YP_005232256.1 CDS STMMW_12001 NC_016854.1 1271646 1271819 D pfam_scan;Pfam:PF01783; E()=2.7E-20;score=71.7;query2- 57;description=Ribosomal_L32p; 50S ribosomal protein L32 1271646..1271819 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759589 YP_005232257.1 CDS STMMW_12011 NC_016854.1 1271953 1273032 D pfam_scan;Pfam:PF02504; E()=1.4E-125;score=418.2;query 4-331;description=FA_synthesis; Fatty acid/phospholipid synthesis protein plsX 1271953..1273032 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759590 YP_005232258.1 CDS STMMW_12021 NC_016854.1 1273112 1274065 D pfam_scan;Pfam:PF08545; E()=1.9E-30;score=104.0;query 106-183;description=ACP_syn_III; pfam_scan;Pfam:PF08541; E()=2.3E-37;score=125.9;query 228-317;description=ACP_syn_III_C; Beta-ketoacyl-ACP synthase III; KAS III; 3-oxoacyl-ACP synthase 1273112..1274065 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759591 YP_005232259.1 CDS STMMW_12031 NC_016854.1 1274081 1275010 D pfam_scan;Pfam:PF00698; E()=8.0E-43;score=146.5;query 6-290;description=Acyl_transf_1; malonyl CoA-acyl carrier protein transacylase 1274081..1275010 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759592 YP_005232260.1 CDS STMMW_12041 NC_016854.1 1275023 1275757 D pfam_scan;Pfam:PF00106; E()=1.8E-33;score=115.5;query 7-169;description=adh_short; 3-oxoacyl-ACP reductase 1275023..1275757 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759593 YP_005232261.1 CDS STMMW_12051 NC_016854.1 1275913 1276149 D pfam_scan;Pfam:PF00550; E()=9.5E-16;score=57.1;query6-73;description=PP-binding; acyl-carrier protein; acyl carrier protein 1275913..1276149 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759594 YP_005232262.1 CDS STMMW_12061 NC_016854.1 1276271 1277476 D pfam_scan;Pfam:PF00109; E()=1.1E-52;score=178.5;query 3-235;description=ketoacyl-synt; pfam_scan;Pfam:PF02801; E()=1.2E-40;score=137.7;query 243-358;description=Ketoacyl-synt_C; 3-oxoacyl-ACP synthase 1276271..1277476 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759595 YP_005232263.1 CDS STMMW_12071 NC_016854.1 1277600 1278409 D pfam_scan;Pfam:PF01063; E()=4.7E-46;score=156.8;query 38-254;description=Aminotran_4; 4-amino-4-deoxychorismate lyase 1277600..1278409 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759596 YP_005232264.1 CDS STMMW_12081 NC_016854.1 1278478 1279434 D pfam_scan;Pfam:PF02618; E()=3.7E-101;score=337.8;query 19-308;description=ADC_lyase; hypothetical protein 1278478..1279434 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759597 YP_005232265.1 CDS STMMW_12091 NC_016854.1 1279424 1280065 D pfam_scan;Pfam:PF02223; E()=9.7E-59;score=197.6;query 8-200;description=Thymidylate_kin; dTMP kinase. thymidylate kinase EC 2.7.4.9; dTMP kinase 1279424..1280065 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759598 YP_005232266.1 CDS STMMW_12101 NC_016854.1 1280062 1281066 D pfam_scan;Pfam:PF09115; E()=1.1E-37;score=128.1;query 206-323;description=DNApol3-delta_C; DNA polymerase III subunit delta' 1280062..1281066 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759599 YP_005232267.1 CDS STMMW_12111 NC_016854.1 1281077 1281874 D pfam_scan;Pfam:PF01026; E()=1.0E-87;score=293.1;query 4-255;description=TatD_DNase; hypothetical protein 1281077..1281874 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759600 YP_005232268.1 CDS STMMW_12121 NC_016854.1 1282169 1283602 D pfam_scan;Pfam:PF00367; E()=1.4E-12;score=46.3;query403-436;description=PTS_EIIB; pfam_scan;Pfam:PF02378; E()=1.2E-84;score=283.7;query 13-320;description=PTS_EIIC; tmhmm; query 1-478; PTS system glucose-specific transporter subunit IIBC 1282169..1283602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759601 YP_005232269.1 CDS STMMW_12131 NC_016854.1 1283687 1285861 R pfam_scan;Pfam:PF07715; E()=2.9E-19;score=68.8;query73-173;description=Plug; pfam_scan;Pfam:PF00593; E()=6.9E-44;score=150.4;query 488-724;description=TonB_dep_Rec; outer-membrane receptor for Fe(iii)-coprogen, fe(iii)-ferrioxamine b and fe(iii)-rhodotrulic acid complement(1283687..1285861) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759602 YP_005232270.1 CDS STMMW_12141 NC_016854.1 1286203 1286562 D pfam_scan;Pfam:PF01230; E()=4.8E-33;score=112.9;query 12-109;description=HIT; putative protein kinase C inhibitor 1286203..1286562 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759603 YP_005232271.1 CDS STMMW_12151 NC_016854.1 1286565 1286939 D pfam_scan;Pfam:PF07233; E()=1.3E-22;score=78.8;query33-123;description=DUF1425; putative lipoprotein 1286565..1286939 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759604 YP_005232272.1 CDS STMMW_12161 NC_016854.1 1286953 1287591 D Signal peptide; signalp; query 1-23;cleavage_site_probability=0.999; 0.999; putative lipoprotein 1286953..1287591 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759605 YP_005232273.1 CDS STMMW_12171 NC_016854.1 1287572 1288396 D pfam_scan;Pfam:PF01636; E()=9.4E-24;score=83.9;query29-235;description=APH; hypothetical protein 1287572..1288396 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759606 YP_005232274.1 CDS STMMW_12181 NC_016854.1 1288407 1289432 D pfam_scan;Pfam:PF00933; E()=2.2E-54;score=183.5;query 57-277;description=Glyco_hydro_3; beta-N-acetylhexosaminidase; beta-hexosaminidase; putative glycosyl hydrolase; N-acetyl-beta-glucosaminidase 1288407..1289432 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759607 YP_005232275.1 CDS STMMW_12191 NC_016854.1 1289457 1289999 D pfam_scan;Pfam:PF05728; E()=3.1E-72;score=241.9;query 1-177;description=UPF0227; hypothetical protein 1289457..1289999 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759608 YP_005232276.1 CDS STMMW_12201 NC_016854.1 1290254 1291558 D pfam_scan;Pfam:PF07992; E()=1.0E-36;score=126.5;query 7-318;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=4.6E-13;score=49.1;query173-275;description=Pyr_redox; NADH dehydrogenase 1290254..1291558 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759609 YP_005232277.1 CDS STMMW_12211 NC_016854.1 1291737 1292276 D pfam_scan;Pfam:PF05433; E()=9.7E-12;score=44.0;query71- 113;description=Rick_17kDa_Anti; tmhmm; query 1-180; hypothetical protein 1291737..1292276 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759610 YP_005232278.1 CDS STMMW_12221 NC_016854.1 1292351 1292986 R pfam_scan;Pfam:PF00440; E()=1.3E-12;score=46.7;query25-70;description=TetR_N; Putative TetR family regulatory protein complement(1292351..1292986) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759611 YP_005232279.1 CDS STMMW_12231 NC_016854.1 1293228 1293485 D pfam_scan;Pfam:PF07338; E()=1.5E-19;score=69.8;query28-85;description=DUF1471; tmhmm; query 1-86; hypothetical protein 1293228..1293485 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759612 YP_005232280.1 CDS STMMW_12241 NC_016854.1 1293582 1294547 R pfam_scan;Pfam:PF03734; E()=4.4E-23;score=81.4;query103-240;description=YkuD; pfam_scan;Pfam:PF01476; E()=2.0E-5;score=24.1;query 53-91;description=LysM; tmhmm; query 1-322; hypothetical protein complement(1293582..1294547) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759613 YP_005232281.1 CDS STMMW_12251 NC_016854.1 1294695 1298141 R pfam_scan;Pfam:PF00271; E()=2.4E-16;score=58.5;query835- 906;description=Helicase_C; pfam_scan;Pfam:PF03461; E()=2.8E-30;score=103.7;query 1005-1102;description=TRCF; pfam_scan;Pfam:PF00270; E()=2.2E-32;score=111.8;query 602-763;description=DEAD; pfam_scan;Pfam:PF02559; E()=1.9E-30;score=104.4;query 476-573;description=CarD_TRCF; transcription-repair coupling factor (TrcF) complement(1294695..1298141) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759614 YP_005232282.1 CDS STMMW_12261 NC_016854.1 1298368 1299678 D pfam_scan;Pfam:PF02687; E()=3.1E-24;score=84.8;query294-429;description=FtsX; tmhmm; query 1-437; ABC transporter 1298368..1299678 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759615 YP_005232283.1 CDS STMMW_12271 NC_016854.1 1299671 1300372 D pfam_scan;Pfam:PF00005; E()=9.0E-51;score=172.4;query 35-207;description=ABC_tran; ABC transporter ATP-binding protein 1299671..1300372 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759616 YP_005232284.1 CDS STMMW_12281 NC_016854.1 1300372 1301616 D pfam_scan;Pfam:PF02687; E()=2.6E-29;score=101.4;query 222-407;description=FtsX; tmhmm; query 1-415; ABC transporter 1300372..1301616 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759617 YP_005232285.1 CDS STMMW_12291 NC_016854.1 1301645 1302556 D pfam_scan;Pfam:PF00480; E()=6.1E-44;score=149.6;query 4-194;description=ROK; putative ROK family protein 1301645..1302556 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759618 YP_005232286.1 CDS STMMW_12301 NC_016854.1 1302575 1303396 D pfam_scan;Pfam:PF02146; E()=2.4E-50;score=170.1;query 48-221;description=SIR2; putative regulatory protein 1302575..1303396 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759619 YP_005232287.1 CDS STMMW_12311 NC_016854.1 1303478 1304524 R pfam_scan;Pfam:PF01547; E()=2.8E-17;score=62.9;query41-284;description=SBP_bac_1; spermidine/putrescine-binding periplasmic protein precursor complement(1303478..1304524) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759620 YP_005232288.1 CDS STMMW_12321 NC_016854.1 1304549 1305328 R pfam_scan;Pfam:PF00528; E()=4.0E-18;score=65.2;query75- 253;description=BPD_transp_1; tmhmm; query 1-260; spermidine/putrescine transport system permease protein PotC complement(1304549..1305328) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759621 YP_005232289.1 CDS STMMW_12331 NC_016854.1 1305644 1306654 R pfam_scan;Pfam:PF06767; E()=8.4E-201;score=665.6;query 1-336;description=Sif; putative virulence determinant complement(1305644..1306654) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759622 YP_005232290.1 CDS STMMW_12341 NC_016854.1 1306983 1307846 R pfam_scan;Pfam:PF00528; E()=9.6E-14;score=50.9;query83- 283;description=BPD_transp_1; tmhmm; query 1-288; spermidine/putrescine transport system permease PotB complement(1306983..1307846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759623 YP_005232291.1 CDS STMMW_12351 NC_016854.1 1307830 1308966 R pfam_scan;Pfam:PF08402; E()=3.1E-7;score=30.2;query 292-371;description=TOBE_2; pfam_scan;Pfam:PF00005; E()=1.0E-48;score=165.7;query 43-209;description=ABC_tran; spermidine/putrescine transport ATP-binding protein PotA (ABC superfamily) complement(1307830..1308966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759624 YP_005232292.1 CDS STMMW_12361 NC_016854.1 1309217 1310446 D pfam_scan;Pfam:PF07687; E()=6.9E-15;score=54.1;query206-304;description=M20_dimer; pfam_scan;Pfam:PF01546; E()=2.1E-18;score=66.3;query139- 402;description=Peptidase_M20; peptidase T; aminotripeptidase 1309217..1310446 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759625 YP_005232293.1 CDS STMMW_12381 NC_016854.1 1310657 1311115 D pfam_scan;Pfam:PF01797; E()=6.0E-40;score=135.3;query 12-129;description=Transposase_17; putative transposase 1310657..1311115 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759627 YP_005232294.1 CDS STMMW_12391 NC_016854.1 1312535 1313656 R pfam_scan;Pfam:PF08007; E()=1.3E-117;score=392.0;query 9-310;description=Cupin_4; hypothetical protein complement(1312535..1313656) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759628 YP_005232295.1 CDS STMMW_12401 NC_016854.1 1313737 1315200 R pfam_scan;Pfam:PF08918; E()=3.8E-92;score=306.3;query 10-190;description=PhoQ_Sensor; pfam_scan;Pfam:PF02518; E()=1.5E-21;score=75.8;query376-477;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.0E-4;score=21.9;query 271-323;description=HisKA; tmhmm; query 1-488; sensor protein PhoQ, regulator of virulence determinants complement(1313737..1315200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759629 YP_005232296.1 CDS STMMW_12411 NC_016854.1 1315200 1315874 R pfam_scan;Pfam:PF00486; E()=2.5E-19;score=68.1;query147- 221;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=8.8E-26;score=89.8;query4- 113;description=Response_reg; transcriptional regulatory protein PhoP, regulator of virulence determinants complement(1315200..1315874) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759630 YP_005232297.1 CDS STMMW_12421 NC_016854.1 1315998 1317368 R pfam_scan;Pfam:PF08328; E()=1.4E-55;score=186.2;query 331-445;description=ASL_C; pfam_scan;Pfam:PF00206; E()=1.1E-68;score=231.2;query 14-312;description=Lyase_1; adenylosuccinate lyase complement(1315998..1317368) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759631 YP_005232298.1 CDS STMMW_12431 NC_016854.1 1317372 1318019 R pfam_scan;Pfam:PF04356; E()=1.6E-76;score=256.2;query 9-202;description=DUF489; hypothetical protein complement(1317372..1318019) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759632 YP_005232299.1 CDS STMMW_12441 NC_016854.1 1318100 1319251 R pfam_scan;Pfam:PF03054; E()=5.5E-147;score=489.0;query 21-375;description=tRNA_Me_trans; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase; 5-methylaminomethyl-2-thiouridylate-methyltrans ferase complement(1318100..1319251) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759633 YP_005232300.1 CDS STMMW_12451 NC_016854.1 1319260 1319721 R pfam_scan;Pfam:PF00293; E()=2.9E-25;score=88.3;query4-118;description=NUDIX; putative MutT family protein complement(1319260..1319721) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759634 YP_005232301.1 CDS STMMW_12461 NC_016854.1 1319733 1320062 R pfam_scan;Pfam:PF07007; E()=2.0E-12;score=46.7;query22-98;description=DUF1311; hypothetical protein complement(1319733..1320062) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759635 YP_005232302.1 CDS STMMW_12471 NC_016854.1 1320059 1320724 R pfam_scan;Pfam:PF00849; E()=9.8E-18;score=64.5;query41- 186;description=PseudoU_synth_2; putative ribosomal large subunit pseudouridine synthase B complement(1320059..1320724) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759636 YP_005232303.1 CDS STMMW_12481 NC_016854.1 1320896 1322146 D pfam_scan;Pfam:PF00180; E()=6.8E-96;score=320.8;query 29-412;description=Iso_dh; isocitrate dehydrogenase 1320896..1322146 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759637 YP_005232304.1 CDS STMMW_12491 NC_016854.1 1322594 1323718 D putative bacteriophage protein 1322594..1323718 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759638 YP_005232305.1 CDS STMMW_12501 NC_016854.1 1324700 1325488 R Signal peptide; signalp; query 1-26;cleavage_site_probability=0.957; 0.963; lipoprotein complement(1324700..1325488) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759639 YP_005232306.1 CDS STMMW_12511 NC_016854.1 1325977 1326216 R pfam_scan;Pfam:PF06183; E()=1.6E-21;score=75.5;query16-77;description=DinI; putative virulence protein (MsgA) complement(1325977..1326216) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759640 YP_005232307.1 CDS STMMW_12521 NC_016854.1 1326407 1326928 R pfam_scan;Pfam:PF00652; E()=1.7E-20;score=72.9;query57- 165;description=Ricin_B_lectin; putative lipoprotein complement(1326407..1326928) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759641 YP_005232308.1 CDS STMMW_12531 NC_016854.1 1327343 1327555 R pfam_scan;Pfam:PF00313; E()=2.1E-18;score=65.4;query4-68;description=CSD; cold shock protein (CspH) complement(1327343..1327555) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759642 YP_005232309.1 CDS STMMW_12541 NC_016854.1 1327687 1327950 R Signal peptide; signalp; query 1-21;cleavage_site_probability=0.993; 0.999; putative outer membrane virulence protein (PagD) complement(1327687..1327950) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759643 YP_005232310.1 CDS STMMW_12551 NC_016854.1 1328849 1329319 D pfam_scan;Pfam:PF06316; E()=1.7E-25;score=89.3;query10-156;description=Ail_Lom; outer membrane invasion protein (PagC) 1328849..1329319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759644 YP_005232311.1 CDS STMMW_12561 NC_016854.1 1330556 1330900 R pfam_scan;Pfam:PF09864; E()=1.6E-11;score=43.7;query34-110;description=DUF2091; hypothetical protein complement(1330556..1330900) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759645 YP_005232312.1 CDS STMMW_12571 NC_016854.1 1331603 1331875 D hypothetical protein 1331603..1331875 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759646 YP_005232313.1 CDS STMMW_12581 NC_016854.1 1332027 1332494 D pfam_scan;Pfam:PF00011; E()=2.8E-15;score=55.7;query47-144;description=HSP20; putative heat shock protein 1332027..1332494 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759647 YP_005232314.1 CDS STMMW_12591 NC_016854.1 1332833 1333876 D hypothetical protein 1332833..1333876 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759648 YP_005232315.1 CDS STMMW_12601 NC_016854.1 1333959 1334489 R pfam_scan;Pfam:PF00033; E()=1.9E-30;score=105.4;query 3-174;description=Cytochrom_B_N; tmhmm; query 1-177; putative cytochrome complement(1333959..1334489) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759649 YP_005232316.1 CDS STMMW_12611 NC_016854.1 1334638 1334952 R tmhmm; query 1-105; putative lipoprotein complement(1334638..1334952) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759650 YP_005232317.1 CDS STMMW_12621 NC_016854.1 1335634 1337268 D pfam_scan;Pfam:PF00496; E()=4.6E-74;score=249.3;query 91-445;description=SBP_bac_5; tmhmm; query 1-545; putative substrate-binding transport protein 1335634..1337268 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759651 YP_005232318.1 CDS STMMW_12631 NC_016854.1 1337268 1338242 D pfam_scan;Pfam:PF00528; E()=4.5E-41;score=139.9;query 115-319;description=BPD_transp_1; tmhmm; query 1-325; putative inner membrane transport protein 1337268..1338242 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759652 YP_005232319.1 CDS STMMW_12641 NC_016854.1 1338232 1339044 D pfam_scan;Pfam:PF00528; E()=7.6E-22;score=77.3;query84- 262;description=BPD_transp_1; tmhmm; query 1-271; putative inner membrane transport protein 1338232..1339044 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759653 YP_005232320.1 CDS STMMW_12651 NC_016854.1 1339038 1339835 D pfam_scan;Pfam:PF00005; E()=3.3E-29;score=102.0;query 36-206;description=ABC_tran; putative ABC transport ATP-binding protein 1339038..1339835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759654 YP_005232321.1 CDS STMMW_12661 NC_016854.1 1339829 1340419 D pfam_scan;Pfam:PF00005; E()=2.2E-24;score=86.2;query27-182;description=ABC_tran; putative ABC transport ATP-binding subunit 1339829..1340419 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759655 YP_005232322.1 CDS STMMW_12671 NC_016854.1 1340501 1341634 R pfam_scan;Pfam:PF00924; E()=1.2E-57;score=194.1;query 143-344;description=MS_channel; tmhmm; query 1-378; hypothetical protein complement(1340501..1341634) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759656 YP_005232323.1 CDS STMMW_12681 NC_016854.1 1341828 1342154 D pfam_scan;Pfam:PF03860; E()=2.0E-4;score=20.5;query 64-84;description=DUF326; hypothetical protein 1341828..1342154 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759657 YP_005232324.1 CDS STMMW_12691 NC_016854.1 1342351 1342998 D pfam_scan;Pfam:PF09223; E()=5.9E-84;score=279.4;query 35-215;description=YodA; hypothetical protein 1342351..1342998 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759658 YP_005232325.1 CDS STMMW_12701 NC_016854.1 1343107 1343895 D pfam_scan;Pfam:PF01909; E()=1.2E-8;score=34.2;query 28-109;description=NTP_transf_2; aminoglycoside-resistance protein 1343107..1343895 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759659 YP_005232326.1 CDS STMMW_12711 NC_016854.1 1344040 1344633 D pfam_scan;Pfam:PF00196; E()=2.4E-9;score=36.2;query 115-161;description=GerE; putative regulatory protein 1344040..1344633 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759660 YP_005232327.1 CDS STMMW_12721 NC_016854.1 1344702 1345550 D pfam_scan;Pfam:PF00376; E()=1.8E-8;score=33.5;query 5-41;description=MerR; putative transcriptional regulator 1344702..1345550 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759661 YP_005232328.1 CDS STMMW_12731 NC_016854.1 1345805 1346053 R pfam_scan;Pfam:PF10798; E()=3.5E-29;score=99.8;query23-82;description=YmgB; hypothetical protein complement(1345805..1346053) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759662 YP_005232329.1 CDS STMMW_12741 NC_016854.1 1346132 1346281 R hypothetical protein complement(1346132..1346281) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759663 YP_005232330.1 CDS STMMW_12751 NC_016854.1 1346364 1346909 D pfam_scan;Pfam:PF01817; E()=9.6E-15;score=54.4;query30-100;description=CM_2; putative chorismate mutase 1346364..1346909 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759664 YP_005232331.1 CDS STMMW_12761 NC_016854.1 1347106 1347744 D pfam_scan;Pfam:PF01810; E()=6.6E-50;score=168.7;query 19-209;description=LysE; tmhmm; query 1-213; putative membrane transport protein 1347106..1347744 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759665 YP_005232332.1 CDS STMMW_12771 NC_016854.1 1347917 1348279 D pfam_scan;Pfam:PF09313; E()=1.8E-23;score=81.8;query12-96;description=DUF1971; hypothetical protein 1347917..1348279 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759666 YP_005232333.1 CDS STMMW_12781 NC_016854.1 1348282 1348464 D pfam_scan;Pfam:PF08956; E()=1.2E-35;score=120.5;query 1-60;description=DUF1869; hypothetical protein 1348282..1348464 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759667 YP_005232334.1 CDS STMMW_12791 NC_016854.1 1348694 1349335 D tmhmm; query 1-214; hypothetical protein 1348694..1349335 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759668 YP_005232335.1 CDS STMMW_12801 NC_016854.1 1349457 1349642 D hypothetical protein 1349457..1349642 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759669 YP_005232336.1 CDS STMMW_12811 NC_016854.1 1349650 1349898 D pfam_scan;Pfam:PF04226; E()=1.1E-14;score=53.9;query33- 81;description=Transgly_assoc; tmhmm; query 1-83; putative inner membrane protein 1349650..1349898 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759670 YP_005232337.1 CDS STMMW_12821 NC_016854.1 1350331 1350582 D pfam_scan;Pfam:PF03891; E()=5.5E-21;score=73.3;query30-78;description=DUF333; hypothetical protein 1350331..1350582 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759671 YP_005232338.1 CDS STMMW_12831 NC_016854.1 1350651 1350962 D hypothetical protein 1350651..1350962 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759672 YP_005232339.1 CDS STMMW_12841 NC_016854.1 1350948 1351295 R pfam_scan;Pfam:PF04343; E()=3.9E-36;score=123.5;query 4-112;description=DUF488; putative bacteriophage protein complement(1350948..1351295) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759673 YP_005232340.1 CDS STMMW_12851 NC_016854.1 1351414 1352598 R pfam_scan;Pfam:PF07690; E()=8.5E-29;score=100.6;query 24-348;description=MFS_1; tmhmm; query 1-395; hypothetical protein complement(1351414..1352598) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759674 YP_005232341.1 CDS STMMW_12861 NC_016854.1 1352699 1353493 D pfam_scan;Pfam:PF02311; E()=4.8E-5;score=22.7;query 21-90;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=8.4E-6;score=25.3;query 223-256;description=HTH_AraC; putative transcriptional regulator 1352699..1353493 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759675 YP_005232342.1 CDS STMMW_12862 NC_016854.1 1353473 1353919 R pfam_scan;Pfam:PF04284; E()=1.4E-46;score=157.7;query 7-145;description=DUF441; tmhmm; query 1-149; hypothetical protein complement(1353473..1353919) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759676 YP_005232343.1 CDS STMMW_12881 NC_016854.1 1354229 1354747 R pfam_scan;Pfam:PF04073; E()=1.6E-25;score=88.7;query30-155;description=YbaK; hypothetical protein complement(1354229..1354747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759677 YP_005232344.1 CDS STMMW_12891 NC_016854.1 1354797 1356290 R pfam_scan;Pfam:PF00990; E()=1.1E-34;score=119.0;query 346-494;description=GGDEF; tmhmm; query 1-498; hypothetical protein complement(1354797..1356290) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759678 YP_005232345.1 CDS STMMW_12901 NC_016854.1 1356931 1358217 R pfam_scan;Pfam:PF04285; E()=1.8E-199;score=662.4;query 1-423;description=DUF444; hypothetical protein complement(1356931..1358217) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759679 YP_005232346.1 CDS STMMW_12911 NC_016854.1 1358340 1360274 R pfam_scan;Pfam:PF08298; E()=3.4E-187;score=621.0;query 20-380;description=AAA_PrkA; pfam_scan;Pfam:PF06798; E()=2.7E-89;score=298.8;query 382-636;description=PrkA; hypothetical protein complement(1358340..1360274) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759680 YP_005232347.1 CDS STMMW_12921 NC_016854.1 1360701 1361447 D pfam_scan;Pfam:PF06629; E()=2.3E-76;score=255.9;query 25-248;description=MipA; putative outer membrane protein 1360701..1361447 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759681 YP_005232348.1 CDS STMMW_12931 NC_016854.1 1361737 1362933 D pfam_scan;Pfam:PF04055; E()=9.4E-14;score=51.3;query15- 160;description=Radical_SAM; putative regulatory protein 1361737..1362933 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759682 YP_005232349.1 CDS STMMW_12941 NC_016854.1 1363030 1363887 D pfam_scan;Pfam:PF00248; E()=3.8E-75;score=252.0;query 18-273;description=Aldo_ket_red; putative oxidoreductase 1363030..1363887 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759683 YP_005232350.1 CDS STMMW_12951 NC_016854.1 1363986 1364870 R pfam_scan;Pfam:PF01263; E()=5.1E-39;score=133.8;query 27-276;description=Aldose_epim; hypothetical protein complement(1363986..1364870) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759684 YP_005232351.1 CDS STMMW_12961 NC_016854.1 1364870 1365124 R Note difference in N-terminus compared to the Salmonella choleraesuis orthologue; hypothetical protein complement(1364870..1365124) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759685 YP_005232352.1 CDS STMMW_12971 NC_016854.1 1365205 1366200 R pfam_scan;Pfam:PF00044; E()=1.2E-63;score=213.1;query 3-150;description=Gp_dh_N; pfam_scan;Pfam:PF02800; E()=2.2E-78;score=261.0;query 155-312;description=Gp_dh_C; glyceraldehyde 3-phosphate dehydrogenase a complement(1365205..1366200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759686 YP_005232353.1 CDS STMMW_12981 NC_016854.1 1366512 1366955 D pfam_scan;Pfam:PF01641; E()=4.9E-56;score=187.6;query 18-138;description=SelR; peptide methionine sulfoxide reductase MsrB 1366512..1366955 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759687 YP_005232354.1 CDS STMMW_12991 NC_016854.1 1366997 1367275 D pfam_scan;Pfam:PF07023; E()=9.6E-37;score=124.3;query 4-83;description=DUF1315; hypothetical protein 1366997..1367275 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759688 YP_005232355.1 CDS STMMW_13001 NC_016854.1 1367627 1368283 R pfam_scan;Pfam:PF00857; E()=1.8E-34;score=118.2;query 5-206;description=Isochorismatase; pyrazinamidase/nicotinamidase complement(1367627..1368283) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759689 YP_005232356.1 CDS STMMW_13011 NC_016854.1 1368310 1369326 R pfam_scan;Pfam:PF00710; E()=5.0E-102;score=340.8;query 6-323;description=Asparaginase; L-asparaginase I complement(1368310..1369326) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759690 YP_005232357.1 CDS STMMW_13021 NC_016854.1 1369422 1371278 R pfam_scan;Pfam:PF01343; E()=1.7E-37;score=128.0;query 141-297;description=Peptidase_S49; tmhmm; query 1-619; protease IV complement(1369422..1371278) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759691 YP_005232358.1 CDS STMMW_13031 NC_016854.1 1371452 1372003 D pfam_scan;Pfam:PF00881; E()=3.1E-24;score=85.7;query9- 161;description=Nitroreductase; putative nitroreductase 1371452..1372003 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759692 YP_005232359.1 CDS STMMW_13041 NC_016854.1 1372121 1373164 D pfam_scan;Pfam:PF00586; E()=2.4E-21;score=75.2;query50-140;description=AIRS; pfam_scan;Pfam:PF02769; E()=1.2E-17;score=63.6;query169-342;description=AIRS_C; selenium donor protein; selenophosphate synthase; selenophosphate synthetase; selenide,water dikinase 1372121..1373164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759693 YP_005232360.1 CDS STMMW_13051 NC_016854.1 1373169 1375118 D pfam_scan;Pfam:PF01751; E()=1.6E-12;score=46.9;query2-133;description=Toprim; pfam_scan;Pfam:PF01131; E()=2.1E-116;score=388.7;query 157-593;description=Topoisom_bac; DNA topoisomerase iii 1373169..1375118 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759694 YP_005232361.1 CDS STMMW_13061 NC_016854.1 1375148 1376491 R pfam_scan;Pfam:PF02812; E()=2.3E-47;score=159.7;query 57-186;description=ELFV_dehydrog_N; pfam_scan;Pfam:PF00208; E()=1.7E-92;score=308.7;query 202-445;description=ELFV_dehydrog; NADP-specific glutamate dehydrogenase complement(1375148..1376491) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759695 YP_005232362.1 CDS STMMW_13071 NC_016854.1 1376730 1377005 D pfam_scan;Pfam:PF07383; E()=4.4E-31;score=106.1;query 1-90;description=DUF1496; hypothetical protein 1376730..1377005 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759696 YP_005232363.1 CDS STMMW_13081 NC_016854.1 1376965 1377381 R pfam_scan;Pfam:PF00293; E()=1.9E-28;score=98.5;query6-124;description=NUDIX; putative MutT family protein complement(1376965..1377381) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759697 YP_005232364.1 CDS STMMW_13091 NC_016854.1 1377454 1378260 R pfam_scan;Pfam:PF03372; E()=2.0E-51;score=174.2;query 1-266;description=Exo_endo_phos; exodeoxyribonuclease III complement(1377454..1378260) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759698 YP_005232365.1 CDS STMMW_13101 NC_016854.1 1378706 1379932 D pfam_scan;Pfam:PF00202; E()=1.9E-117;score=391.5;query 26-343;description=Aminotran_3; Acetylornithine/succinyldiaminopimelate aminotransferase 1378706..1379932 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759699 YP_005232366.1 CDS STMMW_13111 NC_016854.1 1379923 1380957 D pfam_scan;Pfam:PF04958; E()=2.9E-142;score=473.2;query 1-336;description=AstA; arginine N-succinyltransferase 1379923..1380957 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759700 YP_005232367.1 CDS STMMW_13121 NC_016854.1 1380954 1382432 D pfam_scan;Pfam:PF00171; E()=2.4E-114;score=381.7;query 9-457;description=Aldedh; succinylglutamic semialdehyde dehydrogenase 1380954..1382432 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759701 YP_005232368.1 CDS STMMW_13131 NC_016854.1 1382429 1383772 D pfam_scan;Pfam:PF04996; E()=2.2E-228;score=757.9;query 1-441;description=AstB; succinylarginine dihydrolase 1382429..1383772 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759702 YP_005232369.1 CDS STMMW_13141 NC_016854.1 1383765 1384733 D pfam_scan;Pfam:PF04952; E()=1.5E-78;score=263.4;query 45-318;description=AstE_AspA; succinylglutamate desuccinylase 1383765..1384733 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759703 YP_005232370.1 CDS STMMW_13151 NC_016854.1 1385069 1385554 D pfam_scan;Pfam:PF07813; E()=2.2E-7;score=29.5;query 47-69;description=LTXXQ; hypothetical protein 1385069..1385554 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759704 YP_005232371.1 CDS STMMW_13161 NC_016854.1 1385629 1386537 R pfam_scan;Pfam:PF01541; E()=1.3E-7;score=31.8;query 44-116;description=GIY-YIG; hypothetical protein complement(1385629..1386537) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759705 YP_005232372.1 CDS STMMW_13171 NC_016854.1 1386631 1387458 R pfam_scan;Pfam:PF02540; E()=6.5E-68;score=228.4;query 23-265;description=NAD_synthase; NAD+ synthase [glutamine-hydrolysing]; NH; NH3-dependent NAD synthetase; 3-dependent NAD+ synthetase complement(1386631..1387458) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759706 YP_005232373.1 CDS STMMW_13181 NC_016854.1 1387677 1388018 D pfam_scan;Pfam:PF04355; E()=1.3E-8;score=33.8;query 34-96;description=SmpA_OmlA; osmotically inducible lipoprotein E precursor 1387677..1388018 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759707 YP_005232374.1 CDS STMMW_13191 NC_016854.1 1388319 1388639 D pfam_scan;Pfam:PF02302; E()=2.9E-15;score=56.4;query6-94;description=PTS_IIB; PTS system, cellobiose-specific IIb component 1388319..1388639 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759708 YP_005232375.1 CDS STMMW_13201 NC_016854.1 1388722 1390080 D pfam_scan;Pfam:PF02378; E()=4.0E-54;score=183.4;query 30-363;description=PTS_EIIC; tmhmm; query 1-453; PTS system cellobiose-specific transporter subunit IIC 1388722..1390080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759709 YP_005232376.1 CDS STMMW_13211 NC_016854.1 1390131 1390478 D pfam_scan;Pfam:PF02255; E()=5.0E-35;score=119.0;query 18-113;description=PTS_IIA; phosphoenolpyruvate dependent phosphotransferase enzyme III-cellobiose 1390131..1390478 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759710 YP_005232377.1 CDS STMMW_13221 NC_016854.1 1390567 1391331 D pfam_scan;Pfam:PF07883; E()=9.4E-9;score=34.4;query 4-55;description=Cupin_2; pfam_scan;Pfam:PF00165; E()=5.4E-12;score=45.0;query208-247;description=HTH_AraC; putative cel operon repressor 1390567..1391331 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759711 YP_005232378.1 CDS STMMW_13231 NC_016854.1 1391456 1392811 D pfam_scan;Pfam:PF02056; E()=1.4E-73;score=245.7;query 6-187;description=Glyco_hydro_4; phospho-beta-glucosidase B 1391456..1392811 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759712 YP_005232379.1 CDS STMMW_13241 NC_016854.1 1392824 1393582 D pfam_scan;Pfam:PF04794; E()=8.2E-76;score=254.3;query 4-241;description=YdjC; hypothetical protein 1392824..1393582 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759713 YP_005232380.1 CDS STMMW_13251 NC_016854.1 1393626 1395878 R pfam_scan;Pfam:PF06628; E()=2.1E-21;score=74.9;query487-560;description=Catalase- rel; pfam_scan;Pfam:PF00199; E()=4.1E-174;score=578.1;query 78-464;description=Catalase; catalase HPII complement(1393626..1395878) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759714 YP_005232381.1 CDS STMMW_13261 NC_016854.1 1396243 1396485 D pfam_scan;Pfam:PF10729; E()=2.6E-50;score=167.3;query 1-79;description=CedA; cell division activator CedA 1396243..1396485 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759715 YP_005232382.1 CDS STMMW_13271 NC_016854.1 1396587 1397978 R pfam_scan;Pfam:PF00375; E()=2.5E-106;score=355.4;query 29-443;description=SDF; tmhmm; query 1-464; putative sodium:dicarboxylate symporter complement(1396587..1397978) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759716 YP_005232383.1 CDS STMMW_13281 NC_016854.1 1398115 1398714 R pfam_scan;Pfam:PF04307; E()=3.7E-19;score=68.1;query45-133;description=DUF457; tmhmm; query 1-200; hypothetical protein complement(1398115..1398714) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759717 YP_005232384.1 CDS STMMW_13291 NC_016854.1 1398852 1399520 R pfam_scan;Pfam:PF00702; E()=3.3E-31;score=108.6;query 9-193;description=Hydrolase; putative hydrolase complement(1398852..1399520) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759718 YP_005232385.1 CDS STMMW_13301 NC_016854.1 1399669 1400205 D tmhmm; query 1-179; hypothetical protein 1399669..1400205 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759719 YP_005232386.1 CDS STMMW_13311 NC_016854.1 1400248 1401108 R pfam_scan;Pfam:PF03881; E()=6.9E-116;score=385.6;query 1-285;description=Fructosamin_kin; hypothetical protein complement(1400248..1401108) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759720 YP_005232387.1 CDS STMMW_13321 NC_016854.1 1401215 1401505 R pfam_scan;Pfam:PF11080; E()=8.7E-50;score=166.3;query 1-95;description=DUF2622; hypothetical protein complement(1401215..1401505) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759721 YP_005232388.1 CDS STMMW_13331 NC_016854.1 1401602 1402534 R pfam_scan;Pfam:PF00294; E()=2.9E-64;score=216.9;query 9-297;description=PfkB; 6-phosphofructokinase complement(1401602..1402534) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759722 YP_005232389.1 CDS STMMW_13341 NC_016854.1 1402823 1403581 D pfam_scan;Pfam:PF04338; E()=1.7E-60;score=203.9;query 48-251;description=DUF481; tmhmm; query 1-253; putative outer membrane protein 1402823..1403581 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759723 YP_005232390.1 CDS STMMW_13351 NC_016854.1 1403630 1404589 R pfam_scan;Pfam:PF09982; E()=1.2E-54;score=184.6;query 52-318;description=DUF2219; putative outer membrane protein complement(1403630..1404589) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759724 YP_005232391.1 CDS STMMW_13361 NC_016854.1 1404732 1405046 D tmhmm; query 1-105; hypothetical protein 1404732..1405046 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759725 YP_005232392.1 CDS STMMW_13371 NC_016854.1 1405061 1405897 D pfam_scan;Pfam:PF01223; E()=9.4E-44;score=148.6;query 56-258;description=Endonuclease_NS; putative DNA/RNA non-specific endonuclease 1405061..1405897 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759726 YP_005232393.1 CDS STMMW_13381 NC_016854.1 1406070 1406276 D hypothetical protein 1406070..1406276 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759727 YP_005232394.1 CDS STMMW_13391 NC_016854.1 1406599 1407822 R tmhmm; query 1-408; O-antigen polymerase complement(1406599..1407822) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759728 YP_005232395.1 CDS STMMW_13401 NC_016854.1 1408714 1410642 D pfam_scan;Pfam:PF00587; E()=9.5E-51;score=171.1;query 274-436;description=tRNA-synt_2b; pfam_scan;Pfam:PF03129; E()=1.4E-25;score=88.7;query541- 630;description=HGTP_anticodon; pfam_scan;Pfam:PF07973; E()=1.7E-13;score=49.6;query172-219;description=tRNA_SAD; pfam_scan;Pfam:PF02824; E()=2.7E-12;score=46.1;query4-61;description=TGS; Threonine--tRNA ligase; threonyl-tRNA synthetase; ThrRS 1408714..1410642 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759729 YP_005232396.1 CDS STMMW_13411 NC_016854.1 1410754 1411188 D pfam_scan;Pfam:PF05198; E()=5.8E-22;score=77.0;query1-49;description=IF3_N; pfam_scan;Pfam:PF00707; E()=5.5E-36;score=122.0;query 55-142;description=IF3_C; translation initiation factor IF-3 1410754..1411188 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759730 YP_005232397.1 CDS STMMW_13421 NC_016854.1 1411284 1411481 D pfam_scan;Pfam:PF01632; E()=2.2E-25;score=87.3;query2- 62;description=Ribosomal_L35p; 50S ribosomal protein L35. Chloroplast 50S ribosomal protein L35 1411284..1411481 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759731 YP_005232398.1 CDS STMMW_13431 NC_016854.1 1411532 1411888 D pfam_scan;Pfam:PF00453; E()=1.5E-49;score=166.3;query 2-109;description=Ribosomal_L20; 50S ribosomal protein L20 1411532..1411888 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759732 YP_005232399.1 CDS STMMW_13441 NC_016854.1 1412190 1413173 D pfam_scan;Pfam:PF01409; E()=8.4E-113;score=374.9;query 91-326;description=tRNA-synt_2d; pfam_scan;Pfam:PF02912; E()=2.8E-28;score=97.2;query17-88;description=Phe_tRNA- synt_N; Phenylalanine--tRNA ligase alpha chain; phenylalanyl-tRNA synthetase subunit alpha; PheRS 1412190..1413173 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759733 YP_005232400.1 CDS STMMW_13451 NC_016854.1 1413189 1415576 D pfam_scan;Pfam:PF03147; E()=2.8E-30;score=103.8;query 701-794;description=FDX-ACB; pfam_scan;Pfam:PF03484; E()=2.7E-22;score=77.7;query404-471;description=B5; pfam_scan;Pfam:PF03483; E()=9.8E-78;score=259.1;query 212-385;description=B3_4; pfam_scan;Pfam:PF01588; E()=1.2E-24;score=85.8;query45-145;description=tRNA_bind; Phenylalanine--tRNA ligase beta chain; phenylalanyl-tRNA synthetase subunit beta; PheRS 1413189..1415576 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759734 YP_005232401.1 CDS STMMW_13461 NC_016854.1 1415581 1415880 D pfam_scan;Pfam:PF00216; E()=1.1E-30;score=105.1;query 3-91;description=Bac_DNA_binding; integration host factor subunit alpha 1415581..1415880 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759735 YP_005232402.1 CDS STMMW_13471 NC_016854.1 1416074 1417063 D pfam_scan;Pfam:PF01032; E()=6.5E-88;score=294.6;query 25-326;description=FecCD; tmhmm; query 1-330; vitamin B12 transport system permease; Vitamin B12 transport system permease protein btuC 1416074..1417063 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759736 YP_005232403.1 CDS STMMW_13481 NC_016854.1 1417155 1417706 D pfam_scan;Pfam:PF00255; E()=2.6E-45;score=152.4;query 7-111;description=GSHPx; putative glutathione peroxidase/vitamin B12 transport periplasmic protein BtuE 1417155..1417706 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759737 YP_005232404.1 CDS STMMW_13491 NC_016854.1 1417706 1418455 D pfam_scan;Pfam:PF00005; E()=2.9E-32;score=112.0;query 26-194;description=ABC_tran; vitamin B12 ABC transport ATP-binding protein 1417706..1418455 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759738 YP_005232405.1 CDS STMMW_13501 NC_016854.1 1418532 1418996 D pfam_scan;Pfam:PF00877; E()=5.2E-33;score=112.9;query 47-153;description=NLPC_P60; putative lipoprotein 1418532..1418996 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759739 YP_005232406.1 CDS STMMW_13511 NC_016854.1 1419310 1420023 D pfam_scan;Pfam:PF00563; E()=5.9E-13;score=48.4;query12-223;description=EAL; hypothetical protein 1419310..1420023 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759740 YP_005232407.1 CDS STMMW_13521 NC_016854.1 1420085 1421527 D pfam_scan;Pfam:PF02696; E()=1.2E-195;score=650.1;query 1-456;description=UPF0061; hypothetical protein 1420085..1421527 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759741 YP_005232408.1 CDS STMMW_13531 NC_016854.1 1421562 1421753 R pfam_scan;Pfam:PF10636; E()=1.4E-14;score=52.5;query26-63;description=hemP; hypothetical protein complement(1421562..1421753) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759742 YP_005232409.1 CDS STMMW_13541 NC_016854.1 1421910 1422956 R pfam_scan;Pfam:PF00793; E()=5.7E-96;score=319.9;query 40-337;description=DAHP_synth_1; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(1421910..1422956) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759743 YP_005232410.1 CDS STMMW_13551 NC_016854.1 1423112 1423945 R pfam_scan;Pfam:PF03618; E()=3.6E-82;score=275.5;query 9-267;description=DUF299; hypothetical protein complement(1423112..1423945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759744 YP_005232411.1 CDS STMMW_13561 NC_016854.1 1424282 1426660 D pfam_scan;Pfam:PF01326; E()=1.2E-108;score=362.8;query 19-348;description=PPDK_N; pfam_scan;Pfam:PF00391; E()=9.0E-25;score=85.6;query385-457;description=PEP- utilizers; pfam_scan;Pfam:PF02896; E()=9.9E-58;score=195.1;query 479-789;description=PEP-utilizers_C; phosphoenolpyruvate synthase 1424282..1426660 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759745 YP_005232412.1 CDS STMMW_13571 NC_016854.1 1426702 1428342 R pfam_scan;Pfam:PF00501; E()=3.0E-108;score=361.6;query 52-464;description=AMP-binding; putative ligase/synthetase complement(1426702..1428342) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759746 YP_005232413.1 CDS STMMW_13581 NC_016854.1 1428432 1428725 R ferredoxin-like protein complement(1428432..1428725) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759747 YP_005232414.1 CDS STMMW_13591 NC_016854.1 1428722 1430008 R pfam_scan;Pfam:PF01494; E()=6.8E-12;score=44.6;query6- 172;description=FAD_binding_3; putative electron transfer flavoprotein-quinone oxidoreductase complement(1428722..1430008) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759748 YP_005232415.1 CDS STMMW_13601 NC_016854.1 1430065 1431000 R pfam_scan;Pfam:PF01012; E()=3.0E-21;score=75.6;query17-152;description=ETF; pfam_scan;Pfam:PF00766; E()=3.6E-27;score=93.8;query188-272;description=ETF_alpha; putative electron transfer flavoprotein subunit complement(1430065..1431000) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759749 YP_005232416.1 CDS STMMW_13611 NC_016854.1 1431022 1431786 R pfam_scan;Pfam:PF01012; E()=2.5E-26;score=92.2;query29-183;description=ETF; putative electron transfer flavoprotein subunit complement(1431022..1431786) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759750 YP_005232417.1 CDS STMMW_13621 NC_016854.1 1432249 1433139 D pfam_scan;Pfam:PF07883; E()=5.6E-11;score=41.5;query30-90;description=Cupin_2; pfam_scan;Pfam:PF00165; E()=5.6E-6;score=25.9;query 243-280;description=HTH_AraC; putative HTH-type transcriptional regulator 1432249..1433139 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759751 YP_005232418.1 CDS STMMW_13631 NC_016854.1 1433215 1434366 R pfam_scan;Pfam:PF00441; E()=3.5E-48;score=163.2;query 228-377;description=Acyl-CoA_dh_1; pfam_scan;Pfam:PF02771; E()=3.0E-16;score=59.3;query6-109;description=Acyl- CoA_dh_N; pfam_scan;Pfam:PF02770; E()=4.2E-15;score=54.8;query121-171;description=Acyl- CoA_dh_M; putative acyl-CoA dehydrogenase complement(1433215..1434366) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759752 YP_005232419.1 CDS STMMW_13641 NC_016854.1 1434380 1435933 R pfam_scan;Pfam:PF01144; E()=4.0E-44;score=150.3;query 3-238;description=CoA_trans; putative acetyl CoA transferase complement(1434380..1435933) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759753 YP_005232420.1 CDS STMMW_13651 NC_016854.1 1436129 1436887 R pfam_scan;Pfam:PF01487; E()=2.0E-80;score=268.5;query 19-246;description=DHquinase_I; 3-dehydroquinate dehydratase complement(1436129..1436887) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759754 YP_005232421.1 CDS STMMW_13661 NC_016854.1 1436932 1437798 R pfam_scan;Pfam:PF01488; E()=1.8E-14;score=53.0;query117- 240;description=Shikimate_DH; pfam_scan;Pfam:PF08501; E()=2.5E-26;score=91.1;query12- 94;description=Shikimate_dh_N; shikimate 5-dehydrogenase complement(1436932..1437798) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759755 YP_005232422.1 CDS STMMW_13671 NC_016854.1 1437865 1439100 R pfam_scan;Pfam:PF07690; E()=6.4E-30;score=104.3;query 18-337;description=MFS_1; tmhmm; query 1-412; Putative MFS family transport protein complement(1437865..1439100) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759756 YP_005232423.1 CDS STMMW_13681 NC_016854.1 1439464 1440675 R pfam_scan;Pfam:PF07690; E()=1.1E-30;score=106.8;query 12-330;description=MFS_1; tmhmm; query 1-404; Putative MFS family transport protein complement(1439464..1440675) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759757 YP_005232424.1 CDS STMMW_13691 NC_016854.1 1440816 1441175 R pfam_scan;Pfam:PF08965; E()=3.6E-59;score=197.5;query 2-119;description=DUF1870; hypothetical protein complement(1440816..1441175) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759758 YP_005232425.1 CDS STMMW_13701 NC_016854.1 1441633 1442751 R pfam_scan;Pfam:PF01594; E()=3.4E-57;score=193.4;query 15-345;description=UPF0118; tmhmm; query 1-373; lipoprotein complement(1441633..1442751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759759 YP_005232426.1 CDS STMMW_13711 NC_016854.1 1443016 1446072 D pfam_scan;Pfam:PF02913; E()=9.0E-55;score=185.7;query 281-539;description=FAD-oxidase_C; pfam_scan;Pfam:PF01565; E()=2.1E-38;score=131.1;query 52-192;description=FAD_binding_4; FAD-binding protein 1443016..1446072 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759760 YP_005232427.1 CDS STMMW_13721 NC_016854.1 1446069 1446479 D pfam_scan;Pfam:PF03061; E()=9.0E-17;score=60.0;query50-127;description=4HBT; hypothetical protein 1446069..1446479 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759761 YP_005232428.1 CDS STMMW_13731 NC_016854.1 1446539 1446766 D hypothetical protein 1446539..1446766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759762 YP_005232429.1 CDS STMMW_13741 NC_016854.1 1447054 1448400 R pfam_scan;Pfam:PF00375; E()=1.6E-92;score=310.0;query 29-431;description=SDF; tmhmm; query 1-449; putative transporter complement(1447054..1448400) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759763 YP_005232430.1 CDS STMMW_13751 NC_016854.1 1448827 1449195 D pfam_scan;Pfam:PF01521; E()=1.4E-24;score=85.6;query18-108;description=Fe- S_biosyn; hypothetical protein 1448827..1449195 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759764 YP_005232431.1 CDS STMMW_13761 NC_016854.1 1449204 1450691 D pfam_scan;Pfam:PF01458; E()=1.6E-56;score=191.0;query 231-466;description=UPF0051; hypothetical protein 1449204..1450691 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759765 YP_005232432.1 CDS STMMW_13771 NC_016854.1 1450708 1451454 D pfam_scan;Pfam:PF00005; E()=1.9E-28;score=99.5;query27-205;description=ABC_tran; putative ABC transport ATP-binding subunit 1450708..1451454 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759766 YP_005232433.1 CDS STMMW_13781 NC_016854.1 1451429 1452700 D pfam_scan;Pfam:PF01458; E()=1.7E-79;score=266.1;query 167-393;description=UPF0051; hypothetical protein 1451429..1452700 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759767 YP_005232434.1 CDS STMMW_13791 NC_016854.1 1452697 1453917 D pfam_scan;Pfam:PF00266; E()=7.7E-167;score=554.3;query 25-394;description=Aminotran_5; putative amintransferase 1452697..1453917 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759768 YP_005232435.1 CDS STMMW_13801 NC_016854.1 1453930 1454346 D pfam_scan;Pfam:PF02657; E()=2.6E-46;score=155.8;query 11-134;description=SufE; hypothetical protein 1453930..1454346 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759769 YP_005232436.1 CDS STMMW_13811 NC_016854.1 1454501 1455502 D pfam_scan;Pfam:PF03734; E()=6.2E-23;score=80.9;query97-232;description=YkuD; pfam_scan;Pfam:PF01476; E()=1.9E-6;score=27.4;query 42-85;description=LysM; hypothetical protein 1454501..1455502 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759770 YP_005232437.1 CDS STMMW_13831 NC_016854.1 1456438 1457796 R pfam_scan;Pfam:PF02887; E()=1.6E-30;score=105.0;query 337-450;description=PK_C; pfam_scan;Pfam:PF00224; E()=6.8E-142;score=471.9;query 1-323;description=PK; pyruvate kinase complement(1456438..1457796) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759771 YP_005232438.1 CDS STMMW_13841 NC_016854.1 1458252 1459595 R pfam_scan;Pfam:PF00324; E()=1.0E-29;score=102.8;query 26-414;description=AA_permease; tmhmm; query 1-448; putative amino acid permease complement(1458252..1459595) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759772 YP_005232439.1 CDS STMMW_13851 NC_016854.1 1459617 1460510 R pfam_scan;Pfam:PF00561; E()=1.7E-21;score=76.3;query59- 281;description=Abhydrolase_1; putative hydrolase complement(1459617..1460510) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759773 YP_005232440.1 CDS STMMW_13861 NC_016854.1 1460569 1461306 R pfam_scan;Pfam:PF07090; E()=4.0E-81;score=270.5;query 2-182;description=DUF1355; putative pathogenicity island protein; Orf 245 protein complement(1460569..1461306) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759774 YP_005232441.1 CDS STMMW_13871 NC_016854.1 1461318 1462544 R pfam_scan;Pfam:PF00294; E()=2.0E-70;score=237.0;query 97-389;description=PfkB; pfam_scan;Pfam:PF08220; E()=1.5E-12;score=46.3;query6-59;description=HTH_DeoR; putative ribokinase/regulatory protein complement(1461318..1462544) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759775 YP_005232442.1 CDS STMMW_13881 NC_016854.1 1462867 1465929 R pfam_scan;Pfam:PF00384; E()=3.6E-8;score=32.5;query 241-683;description=Molybdopterin; pfam_scan;Pfam:PF01568; E()=1.7E-12;score=46.5;query891- 962;description=Molydop_binding; tetrathionate reductase subunit A complement(1462867..1465929) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759776 YP_005232443.1 CDS STMMW_13891 NC_016854.1 1465922 1466944 R pfam_scan;Pfam:PF03916; E()=3.3E-59;score=200.2;query 10-290;description=NrfD; tmhmm; query 1-341; tetrathionate reductase subunit C (membrane protein) complement(1465922..1466944) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759777 YP_005232444.1 CDS STMMW_13901 NC_016854.1 1466945 1467697 R pfam_scan;Pfam:PF00037; E()=3.7E-7;score=28.8;query 131-152;description=Fer4; tetrathionate reductase subunit B complement(1466945..1467697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759778 YP_005232445.1 CDS STMMW_13911 NC_016854.1 1467861 1469639 D pfam_scan;Pfam:PF02518; E()=2.6E-19;score=68.6;query477-577;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.5E-6;score=27.7;query 359-419;description=HisKA; tmhmm; query 1-593; putative histidine kinase, two component regulatory protein 1467861..1469639 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759779 YP_005232446.1 CDS STMMW_13921 NC_016854.1 1469614 1470234 D pfam_scan;Pfam:PF00196; E()=2.2E-18;score=65.0;query134-188;description=GerE; pfam_scan;Pfam:PF00072; E()=4.5E-22;score=77.9;query4- 113;description=Response_reg; putative two-component response regulator 1469614..1470234 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759780 YP_005232447.1 CDS STMMW_13931 NC_016854.1 1470332 1470544 D pfam_scan;Pfam:PF10965; E()=4.0E-37;score=125.0;query 1-68;description=DUF2767; pathogenicity island protein 1470332..1470544 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759781 YP_005232448.1 CDS STMMW_13941 NC_016854.1 1470640 1471599 R pfam_scan;Pfam:PF08349; E()=1.3E-43;score=147.5;query 192-309;description=DUF1722; pfam_scan;Pfam:PF04463; E()=8.1E-44;score=148.3;query 7-150;description=DUF523; putative pathogenicity island protein complement(1470640..1471599) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759782 YP_005232449.1 CDS STMMW_13951 NC_016854.1 1471772 1472500 R pfam_scan;Pfam:PF00376; E()=1.6E-12;score=46.3;query4-41;description=MerR; putative transcriptional regulator complement(1471772..1472500) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759783 YP_005232450.1 CDS STMMW_13961 NC_016854.1 1472679 1473317 R pfam_scan;Pfam:PF00196; E()=8.3E-18;score=63.2;query149-203;description=GerE; pfam_scan;Pfam:PF00072; E()=2.1E-24;score=85.4;query6- 117;description=Response_reg; putative two-component response regulator complement(1472679..1473317) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759784 YP_005232451.1 CDS STMMW_13971 NC_016854.1 1473348 1476110 R pfam_scan;Pfam:PF00672; E()=8.5E-11;score=41.2;query300-365;description=HAMP; pfam_scan;Pfam:PF02518; E()=1.2E-29;score=101.9;query 508-612;description=HATPase_c; pfam_scan;Pfam:PF00072; E()=6.9E-21;score=74.0;query691- 802;description=Response_reg; pfam_scan;Pfam:PF00512; E()=1.2E-17;score=63.1;query397-460;description=HisKA; tmhmm; query 1-921; putative two-component sensor kinase complement(1473348..1476110) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759785 YP_005232452.1 CDS STMMW_13981 NC_016854.1 1476511 1476912 D putative pathogenicity island 2 secreted effector protein 1476511..1476912 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759786 YP_005232453.1 CDS STMMW_13991 NC_016854.1 1476914 1478407 D pfam_scan;Pfam:PF03958; E()=6.6E-13;score=48.2;query178- 267;description=Secretin_N; pfam_scan;Pfam:PF00263; E()=6.3E-41;score=140.2;query 270-491;description=Secretin; putative outer membrane secretory protein 1476914..1478407 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759787 YP_005232454.1 CDS STMMW_14001 NC_016854.1 1478388 1479599 D tmhmm; query 1-404; putative pathogenicity island protein 1478388..1479599 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759788 YP_005232455.1 CDS STMMW_14011 NC_016854.1 1479607 1479849 D pfam_scan;Pfam:PF08988; E()=1.4E-4;score=21.5;query 4-65;description=DUF1895; type three secretion system protein 1479607..1479849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759789 YP_005232456.1 CDS STMMW_14021 NC_016854.1 1480113 1480439 D putative pathogenicity island protein 1480113..1480439 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759790 YP_005232457.1 CDS STMMW_14031 NC_016854.1 1480446 1481036 D pfam_scan;Pfam:PF03433; E()=2.4E-76;score=255.0;query 1-189;description=EspA; putative pathogenicity island effector protein 1480446..1481036 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759791 YP_005232458.1 CDS STMMW_14041 NC_016854.1 1481033 1481506 D pfam_scan;Pfam:PF07719; E()=2.0E-5;score=23.9;query 70-98;description=TPR_2; putative Type III secretion system chaperone protein 1481033..1481506 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759792 YP_005232459.1 CDS STMMW_14051 NC_016854.1 1481509 1482963 D pfam_scan;Pfam:PF04888; E()=3.8E-52;score=177.5;query 93-401;description=SseC; putative pathogenicity island effector protein 1481509..1482963 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759793 YP_005232460.1 CDS STMMW_14061 NC_016854.1 1482979 1483566 D putative pathogenicity island effector protein 1482979..1483566 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759794 YP_005232461.1 CDS STMMW_14071 NC_016854.1 1483569 1483985 D pfam_scan;Pfam:PF09621; E()=4.7E-6;score=25.8;query 3-58;description=LcrR; putative pathogenicity island effector protein 1483569..1483985 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759795 YP_005232462.1 CDS STMMW_14081 NC_016854.1 1484037 1484471 D pfam_scan;Pfam:PF00515; E()=0.043;score=13.3;query 98-121;description=TPR_1; putative pathogenicity island protein 1484037..1484471 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759796 YP_005232463.1 CDS STMMW_14091 NC_016854.1 1484487 1485269 D tmhmm; query 1-261; putative pathogenicity island effector protein 1484487..1485269 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759797 YP_005232464.1 CDS STMMW_14101 NC_016854.1 1485266 1485955 D tmhmm; query 1-230; putative pathogenicity island effector protein 1485266..1485955 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759798 YP_005232465.1 CDS STMMW_14111 NC_016854.1 1486049 1486264 D pfam_scan;Pfam:PF09392; E()=3.2E-13;score=49.3;query5-71;description=MxiH; putative pathogenicity island protein 1486049..1486264 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759799 YP_005232466.1 CDS STMMW_14121 NC_016854.1 1486305 1486532 D pfam_scan;Pfam:PF06287; E()=1.6E-5;score=24.0;query 9-67;description=DUF1039; Type three secretion system apparatus 1486305..1486532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759800 YP_005232467.1 CDS STMMW_14131 NC_016854.1 1486544 1486792 D pfam_scan;Pfam:PF09392; E()=1.1E-9;score=38.0;query 23-81;description=MxiH; putative pathogenicity island protein 1486544..1486792 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759801 YP_005232468.1 CDS STMMW_14141 NC_016854.1 1486789 1487538 D pfam_scan;Pfam:PF01514; E()=4.6E-66;score=221.6;query 4-188;description=YscJ_FliF; tmhmm; query 1-250; putative pathogenicity island lipoprotein 1486789..1487538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759802 YP_005232469.1 CDS STMMW_14151 NC_016854.1 1487556 1488104 D putative pathogenicity island protein 1487556..1488104 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759803 YP_005232470.1 CDS STMMW_14161 NC_016854.1 1488101 1488775 D putative pathogenicity island protein 1488101..1488775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759804 YP_005232471.1 CDS STMMW_14171 NC_016854.1 1488741 1489757 D pfam_scan;Pfam:PF07201; E()=6.4E-21;score=74.4;query54-200;description=HrpJ; putative secretion system protein 1488741..1489757 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759805 YP_005232472.1 CDS STMMW_14181 NC_016854.1 1489815 1490183 D putative pathogenicity island protein 1489815..1490183 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759806 YP_005232473.1 CDS STMMW_14191 NC_016854.1 1490168 1492213 D pfam_scan;Pfam:PF00771; E()=3.8E-206;score=686.1;query 33-660;description=FHIPEP; tmhmm; query 1-682; putative type III secretion protein 1490168..1492213 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759807 YP_005232474.1 CDS STMMW_14201 NC_016854.1 1492203 1493504 D pfam_scan;Pfam:PF00006; E()=1.2E-87;score=292.3;query 141-351;description=ATP-synt_ab; putative type III secretion ATP synthase 1492203..1493504 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759808 YP_005232475.1 CDS STMMW_14211 NC_016854.1 1493453 1493884 D putative type III secretion protein 1493453..1493884 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759809 YP_005232476.1 CDS STMMW_14221 NC_016854.1 1493865 1494239 D putative type III secretion protein 1493865..1494239 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759810 YP_005232477.1 CDS STMMW_14231 NC_016854.1 1494220 1495188 D pfam_scan;Pfam:PF01052; E()=6.9E-17;score=60.5;query246-316;description=SpoA; putative type III secretion protein 1494220..1495188 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759811 YP_005232478.1 CDS STMMW_14241 NC_016854.1 1495256 1495903 D pfam_scan;Pfam:PF00813; E()=4.8E-68;score=228.2;query 14-211;description=FliP; tmhmm; query 1-216; putative type III secretion protein 1495256..1495903 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759812 YP_005232479.1 CDS STMMW_14251 NC_016854.1 1495900 1496166 D pfam_scan;Pfam:PF01313; E()=5.3E-25;score=86.4;query5-79;description=Bac_export_3; tmhmm; query 1-89; putative type III secretion protein 1495900..1496166 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759813 YP_005232480.1 CDS STMMW_14261 NC_016854.1 1496167 1496946 D pfam_scan;Pfam:PF01311; E()=2.8E-76;score=255.7;query 3-251;description=Bac_export_1; tmhmm; query 1-260; putative type III secretion protein 1496167..1496946 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759814 YP_005232481.1 CDS STMMW_14271 NC_016854.1 1496943 1498001 D pfam_scan;Pfam:PF01312; E()=1.3E-130;score=434.8;query 1-341;description=Bac_export_2; tmhmm; query 1-353; putative type III secretion protein 1496943..1498001 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759815 YP_005232482.1 CDS STMMW_14281 NC_016854.1 1498474 1499847 R pfam_scan;Pfam:PF01554; E()=6.3E-39;score=133.1;query 16-177;description=MatE; tmhmm; query 1-458; Multidrug-efflux transporter complement(1498474..1499847) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759816 YP_005232483.1 CDS STMMW_14291 NC_016854.1 1500064 1500705 D pfam_scan;Pfam:PF00677; E()=2.0E-27;score=94.5;query3-87;description=Lum_binding; riboflavin synthase subunit alpha 1500064..1500705 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759817 YP_005232484.1 CDS STMMW_14301 NC_016854.1 1500747 1501895 R pfam_scan;Pfam:PF02353; E()=1.9E-105;score=351.4;query 108-368;description=CMAS; cyclopropane-fatty-acyl-phospholipid synthase complement(1500747..1501895) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759818 YP_005232485.1 CDS STMMW_14311 NC_016854.1 1502185 1503390 R pfam_scan;Pfam:PF07690; E()=2.6E-44;score=151.6;query 13-341;description=MFS_1; tmhmm; query 1-402; putative integral membrane transport protein complement(1502185..1503390) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759819 YP_005232486.1 CDS STMMW_14321 NC_016854.1 1503503 1504435 D pfam_scan;Pfam:PF00126; E()=3.4E-19;score=68.1;query7-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.8E-27;score=94.0;query88- 289;description=LysR_substrate; putative transcriptional regulator 1503503..1504435 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759820 YP_005232487.1 CDS STMMW_14331 NC_016854.1 1504432 1505457 R pfam_scan;Pfam:PF00356; E()=1.6E-19;score=69.1;query3-48;description=LacI; pfam_scan;Pfam:PF00532; E()=5.7E-36;score=123.7;query 59-322;description=Peripla_BP_1; purine nucleotide synthesis repressor complement(1504432..1505457) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759821 YP_005232488.1 CDS STMMW_14341 NC_016854.1 1505925 1506506 R pfam_scan;Pfam:PF02777; E()=4.4E-46;score=154.7;query 87-190;description=Sod_Fe_C; pfam_scan;Pfam:PF00081; E()=4.9E-34;score=115.6;query 2-82;description=Sod_Fe_N; superoxide dismutase complement(1505925..1506506) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759822 YP_005232489.1 CDS STMMW_14351 NC_016854.1 1506633 1507487 R pfam_scan;Pfam:PF00877; E()=3.5E-37;score=126.3;query 166-276;description=NLPC_P60; hypothetical protein complement(1506633..1507487) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759823 YP_005232490.1 CDS STMMW_14361 NC_016854.1 1507789 1508136 D pfam_scan;Pfam:PF00462; E()=4.1E-19;score=67.8;query17- 81;description=Glutaredoxin; hypothetical protein 1507789..1508136 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759824 YP_005232491.1 CDS STMMW_14371 NC_016854.1 1508214 1508861 R pfam_scan;Pfam:PF00929; E()=2.0E-28;score=99.0;query20-194;description=Exonuc_X-T; RNase T; ribonuclease T; Exoribonuclease T complement(1508214..1508861) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759825 YP_005232492.1 CDS STMMW_14381 NC_016854.1 1508962 1509369 R pfam_scan;Pfam:PF00903; E()=1.3E-29;score=102.5;query 2-123;description=Glyoxalase; lactoylglutathione lyase complement(1508962..1509369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759826 YP_005232493.1 CDS STMMW_14391 NC_016854.1 1509438 1510535 R pfam_scan;Pfam:PF00724; E()=2.0E-92;score=309.5;query 5-343;description=Oxidored_FMN; N-ethylmaleimide reductase complement(1509438..1510535) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759827 YP_005232494.1 CDS STMMW_14401 NC_016854.1 1510594 1511193 R pfam_scan;Pfam:PF00440; E()=3.0E-10;score=39.2;query13-55;description=TetR_N; putative TetR family transcriptional regulator complement(1510594..1511193) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759828 YP_005232495.1 CDS STMMW_14411 NC_016854.1 1511296 1511535 D pfam_scan;Pfam:PF06945; E()=3.8E-17;score=61.2;query11-58;description=DUF1289; hypothetical protein 1511296..1511535 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759829 YP_005232496.1 CDS STMMW_14421 NC_016854.1 1511586 1512482 D pfam_scan;Pfam:PF00248; E()=7.5E-63;score=211.6;query 17-291;description=Aldo_ket_red; putative oxidoreductase 1511586..1512482 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759830 YP_005232497.1 CDS STMMW_14431 NC_016854.1 1512562 1513083 D pfam_scan;Pfam:PF00080; E()=2.8E-30;score=104.7;query 34-172;description=Sod_Cu; copper-zinc superoxide dismutase 1512562..1513083 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759831 YP_005232498.1 CDS STMMW_14441 NC_016854.1 1513059 1515098 R pfam_scan;Pfam:PF04632; E()=2.4E-162;score=541.4;query 20-663;description=FUSC; tmhmm; query 1-680; hypothetical protein complement(1513059..1515098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759832 YP_005232499.1 CDS STMMW_14451 NC_016854.1 1515098 1515994 R pfam_scan;Pfam:PF00529; E()=1.5E-40;score=139.3;query 55-293;description=HlyD; tmhmm; query 1-299; putative HlyD family protein complement(1515098..1515994) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759833 YP_005232500.1 CDS STMMW_14461 NC_016854.1 1515961 1516197 R pfam_scan;Pfam:PF07869; E()=1.6E-14;score=53.0;query19-70;description=DUF1656; tmhmm; query 1-79; hypothetical protein complement(1515961..1516197) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759834 YP_005232501.1 CDS STMMW_14471 NC_016854.1 1516392 1516832 D pfam_scan;Pfam:PF01047; E()=3.9E-16;score=58.0;query31-92;description=MarR; Transcriptional regulator 1516392..1516832 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759835 YP_005232502.1 CDS STMMW_14481 NC_016854.1 1516880 1517347 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.725; 0.990; outer membrane lipoprotein SlyB complement(1516880..1517347) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759836 YP_005232503.1 CDS STMMW_14491 NC_016854.1 1517619 1518740 D pfam_scan;Pfam:PF03702; E()=9.4E-167;score=553.8;query 5-367;description=UPF0075; hypothetical protein 1517619..1518740 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759837 YP_005232504.1 CDS STMMW_14501 NC_016854.1 1518828 1519157 D pfam_scan;Pfam:PF09864; E()=7.9E-18;score=63.8;query35-102;description=DUF2091; lipoprotein 1518828..1519157 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759838 YP_005232505.1 CDS STMMW_14511 NC_016854.1 1519216 1519872 D pfam_scan;Pfam:PF10590; E()=5.8E-20;score=70.0;query178-218;description=PNPOx_C; pfam_scan;Pfam:PF01243; E()=1.7E-26;score=91.2;query41- 122;description=Pyridox_oxidase; pyridoxamine 5'-phosphate oxidase 1519216..1519872 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759839 YP_005232506.1 CDS STMMW_14521 NC_016854.1 1519999 1521273 D pfam_scan;Pfam:PF01479; E()=8.2E-7;score=28.2;query 359-403;description=S4; pfam_scan;Pfam:PF00579; E()=7.2E-95;score=317.3;query 31-329;description=tRNA-synt_1b; tyrosyl-tRNA synthetase 1519999..1521273 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759840 YP_005232507.1 CDS STMMW_14531 NC_016854.1 1521333 1522193 D pfam_scan;Pfam:PF08543; E()=1.7E-16;score=60.0;query74- 256;description=Phos_pyr_kin; pyridoxamine kinase 1521333..1522193 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759841 YP_005232508.1 CDS STMMW_14541 NC_016854.1 1522252 1522857 R pfam_scan;Pfam:PF00043; E()=9.0E-16;score=57.1;query103-189;description=GST_C; pfam_scan;Pfam:PF02798; E()=4.1E-9;score=35.9;query 1-75;description=GST_N; glutathione S-transferase complement(1522252..1522857) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759842 YP_005232509.1 CDS STMMW_14551 NC_016854.1 1522962 1524467 R pfam_scan;Pfam:PF00854; E()=1.4E-83;score=280.9;query 89-429;description=PTR2; tmhmm; query 1-502; putative proton/oligopeptide symporter complement(1522962..1524467) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759843 YP_005232510.1 CDS STMMW_14561 NC_016854.1 1525069 1525704 R pfam_scan;Pfam:PF00730; E()=4.5E-22;score=77.8;query34-168;description=HhH-GPD; pfam_scan;Pfam:PF00633; E()=1.5E-7;score=29.9;query 100-127;description=HHH; pfam_scan;Pfam:PF10576; E()=1.1E-4;score=21.3;query 187-203;description=EndIII_4Fe-2S; endonuclease III complement(1525069..1525704) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759844 YP_005232511.1 CDS STMMW_14571 NC_016854.1 1525704 1526396 R pfam_scan;Pfam:PF02508; E()=5.5E-69;score=230.9;query 1-200;description=Rnf-Nqr; tmhmm; query 1-231; electron transport complex protein complement(1525704..1526396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759845 YP_005232512.1 CDS STMMW_14581 NC_016854.1 1526399 1527019 R pfam_scan;Pfam:PF04205; E()=8.2E-20;score=70.5;query99-187;description=FMN_bind; electron transport complex protein RnfG complement(1526399..1527019) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759846 YP_005232513.1 CDS STMMW_14591 NC_016854.1 1527023 1528081 R pfam_scan;Pfam:PF03116; E()=1.5E-129;score=431.1;query 4-350;description=NQR2_RnfD_RnfE; tmhmm; query 1-353; electron transport complex protein RnfD complement(1527023..1528081) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759847 YP_005232514.1 CDS STMMW_14601 NC_016854.1 1528082 1530289 R pfam_scan;Pfam:PF10531; E()=4.5E-10;score=38.9;query296-344;description=SLBB; pfam_scan;Pfam:PF01512; E()=8.4E-52;score=174.8;query 139-283;description=Complex1_51K; electron transport complex protein RnfC complement(1528082..1530289) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759848 YP_005232515.1 CDS STMMW_14611 NC_016854.1 1530282 1530860 R pfam_scan;Pfam:PF00037; E()=7.5E-8;score=31.0;query 111-132;description=Fer4; pfam_scan;Pfam:PF04060; E()=1.1E-11;score=43.7;query43-77;description=FeS; tmhmm; query 1-193; Electron transport complex protein rnfB complement(1530282..1530860) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759849 YP_005232516.1 CDS STMMW_14621 NC_016854.1 1530860 1531441 R pfam_scan;Pfam:PF02508; E()=6.0E-62;score=208.0;query 1-191;description=Rnf-Nqr; tmhmm; query 1-194; electron transport complex protein RnfA complement(1530860..1531441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759850 YP_005232517.1 CDS STMMW_14631 NC_016854.1 1531518 1531958 R pfam_scan;Pfam:PF10754; E()=4.4E-53;score=178.7;query 4-145;description=DUF2569; tmhmm; query 1-147; hypothetical protein complement(1531518..1531958) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759851 YP_005232518.1 CDS STMMW_14641 NC_016854.1 1532047 1532262 R pfam_scan;Pfam:PF05321; E()=2.7E-21;score=74.7;query8-68;description=HHA; hypothetical protein complement(1532047..1532262) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759852 YP_005232519.1 CDS STMMW_14651 NC_016854.1 1532818 1533933 D pfam_scan;Pfam:PF02894; E()=1.1E-21;score=76.3;query159- 266;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=3.6E-31;score=107.4;query 30-147;description=GFO_IDH_MocA; putative oxidoreductase 1532818..1533933 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759853 YP_005232520.1 CDS STMMW_14661 NC_016854.1 1534008 1535009 R pfam_scan;Pfam:PF00962; E()=1.7E-104;score=348.9;query 6-328;description=A_deaminase; adenosine deaminase; Adenosine aminohydrolase complement(1534008..1535009) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759854 YP_005232521.1 CDS STMMW_14671 NC_016854.1 1535713 1537221 R pfam_scan;Pfam:PF06097; E()=1.2E-167;score=558.1;query 1-482;description=DUF945; tmhmm; query 1-503; hypothetical protein complement(1535713..1537221) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759855 YP_005232522.1 CDS STMMW_14681 NC_016854.1 1537324 1538499 R pfam_scan;Pfam:PF01238; E()=7.2E-112;score=373.6;query 1-356;description=PMI_typeI; mannose-6-phosphate isomerase complement(1537324..1538499) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759856 YP_005232523.1 CDS STMMW_14691 NC_016854.1 1538699 1540345 D pfam_scan;Pfam:PF05683; E()=1.0E-77;score=259.3;query 332-540;description=Fumerase_C; pfam_scan;Pfam:PF05681; E()=2.7E-82;score=275.4;query 48-328;description=Fumerase; class I fumarate hydratase 1538699..1540345 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759857 YP_005232524.1 CDS STMMW_14701 NC_016854.1 1540513 1541916 D pfam_scan;Pfam:PF10415; E()=7.0E-24;score=83.1;query408- 461;description=FumaraseC_C; pfam_scan;Pfam:PF00206; E()=1.8E-127;score=424.3;query 12-342;description=Lyase_1; fumarate hydratase class II; Fumarase C 1540513..1541916 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759858 YP_005232525.1 CDS STMMW_14711 NC_016854.1 1541913 1542842 R pfam_scan;Pfam:PF05472; E()=2.2E-123;score=410.3;query 8-307;description=Ter; DNA sequence-specific contrahelicase; Ter binding protein; Ter protein; DNA replication terminus site-binding protein complement(1541913..1542842) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759859 YP_005232526.1 CDS STMMW_14721 NC_016854.1 1542918 1544219 R pfam_scan;Pfam:PF02518; E()=2.7E-27;score=94.3;query318-423;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=4.9E-10;score=38.8;query212-270;description=HisKA; tmhmm; query 1-434; two component sensor kinase complement(1542918..1544219) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759860 YP_005232527.1 CDS STMMW_14731 NC_016854.1 1544330 1546036 R pfam_scan;Pfam:PF07969; E()=4.9E-82;score=276.0;query 88-530;description=Amidohydro_3; hypothetical protein complement(1544330..1546036) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759861 YP_005232528.1 CDS STMMW_14741 NC_016854.1 1546189 1547322 R pfam_scan;Pfam:PF00267; E()=7.9E-155;score=514.6;query 27-377;description=Porin_1; tmhmm; query 1-378; outer membrane protein complement(1546189..1547322) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759862 YP_005232529.1 CDS STMMW_14751 NC_016854.1 1547802 1548533 R pfam_scan;Pfam:PF00486; E()=3.7E-19;score=67.5;query160- 233;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=6.6E-20;score=70.9;query4- 113;description=Response_reg; putative two-component response regulator complement(1547802..1548533) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759863 YP_005232530.1 CDS STMMW_14761 NC_016854.1 1548660 1548995 D pfam_scan;Pfam:PF06942; E()=8.4E-50;score=166.7;query 5-111;description=GlpM; tmhmm; query 1-112; hypothetical protein 1548660..1548995 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759864 YP_005232531.1 CDS STMMW_14771 NC_016854.1 1549057 1550439 R pfam_scan;Pfam:PF00324; E()=2.4E-15;score=55.4;query13- 450;description=AA_permease; tmhmm; query 1-461; putative amino acid permease complement(1549057..1550439) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759865 YP_005232532.1 CDS STMMW_14781 NC_016854.1 1550738 1551682 R pfam_scan;Pfam:PF07338; E()=1.2E-18;score=66.9;query24-90;description=DUF1471; hypothetical protein complement(1550738..1551682) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759866 YP_005232533.1 CDS STMMW_14791 NC_016854.1 1552209 1553738 D pfam_scan;Pfam:PF05222; E()=3.2E-49;score=165.8;query 4-137;description=AlaDh_PNT_N; pfam_scan;Pfam:PF01262; E()=1.7E-56;score=189.6;query 147-317;description=AlaDh_PNT_C; tmhmm; query 1-510; pyridine nucleotide transhydrogenase subunit-alpha 1552209..1553738 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759867 YP_005232534.1 CDS STMMW_14801 NC_016854.1 1553749 1555137 D pfam_scan;Pfam:PF02233; E()=2.7E-228;score=758.3;query 5-462;description=PNTB; tmhmm; query 1-463; pyridine nucleotide transhydrogenase subunit-beta 1553749..1555137 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759868 YP_005232535.1 CDS STMMW_14811 NC_016854.1 1555312 1556346 R pfam_scan;Pfam:PF01594; E()=5.6E-71;score=238.7;query 14-328;description=UPF0118; tmhmm; query 1-345; hypothetical protein complement(1555312..1556346) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759869 YP_005232536.1 CDS STMMW_14821 NC_016854.1 1556764 1557126 D pfam_scan;Pfam:PF00893; E()=2.5E-25;score=88.2;query3- 93;description=Multi_Drug_Res; tmhmm; query 1-121; hypothetical protein 1556764..1557126 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759870 YP_005232537.1 CDS STMMW_14831 NC_016854.1 1557113 1557442 D pfam_scan;Pfam:PF00893; E()=3.4E-27;score=94.1;query5- 99;description=Multi_Drug_Res; tmhmm; query 1-110; hypothetical protein 1557113..1557442 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759871 YP_005232538.1 CDS STMMW_14841 NC_016854.1 1557482 1558303 R pfam_scan;Pfam:PF00089; E()=8.7E-5;score=21.6;query 49-88;description=Trypsin; hypothetical protein complement(1557482..1558303) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759872 YP_005232539.1 CDS STMMW_14851 NC_016854.1 1558572 1558856 R pfam_scan;Pfam:PF06392; E()=2.0E-6;score=27.3;query 54-72;description=Asr; tmhmm; query 1-95; putative secreted stress response protein complement(1558572..1558856) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759873 YP_005232540.1 CDS STMMW_14861 NC_016854.1 1559215 1560468 R pfam_scan;Pfam:PF07690; E()=1.4E-30;score=106.5;query 41-282;description=MFS_1; tmhmm; query 1-418; putative membrane transport protein complement(1559215..1560468) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759874 YP_005232541.1 CDS STMMW_14871 NC_016854.1 1560588 1561487 D pfam_scan;Pfam:PF00126; E()=1.3E-21;score=75.7;query5-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.8E-46;score=157.5;query 89-293;description=LysR_substrate; putative regulatory protein 1560588..1561487 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759875 YP_005232542.1 CDS STMMW_14881 NC_016854.1 1561615 1562835 D pfam_scan;Pfam:PF00480; E()=1.1E-37;score=129.3;query 90-272;description=ROK; putative regulatory protein 1561615..1562835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759876 YP_005232543.1 CDS STMMW_14891 NC_016854.1 1562961 1563656 D pfam_scan;Pfam:PF01656; E()=1.5E-23;score=83.4;query6-214;description=CbiA; DTBS; Dethiobiotin synthase; dethiobiotin synthetase; putative dethiobiotin synthetase; DTB synthetase 1562961..1563656 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759877 YP_005232544.1 CDS STMMW_14901 NC_016854.1 1563612 1564901 R pfam_scan;Pfam:PF00654; E()=8.0E-80;score=268.0;query 72-414;description=Voltage_CLC; tmhmm; query 1-430; putative voltage gated chloride channel protein; Voltage-gated ClC-type chloride channel clcB. Putative chloride channel protein clcB-like complement(1563612..1564901) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759878 YP_005232545.1 CDS STMMW_14911 NC_016854.1 1565037 1566185 R pfam_scan;Pfam:PF00571; E()=3.6E-9;score=36.4;query 244-305;description=CBS; pfam_scan;Pfam:PF00005; E()=2.8E-43;score=147.9;query 32-202;description=ABC_tran; putative ABC transporter ATP/GTP-binding protein complement(1565037..1566185) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759879 YP_005232546.1 CDS STMMW_14921 NC_016854.1 1566185 1566832 R pfam_scan;Pfam:PF00528; E()=1.5E-23;score=82.9;query34- 205;description=BPD_transp_1; tmhmm; query 1-216; putative ABC transporter membrane protein complement(1566185..1566832) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759880 YP_005232547.1 CDS STMMW_14931 NC_016854.1 1566842 1567744 R pfam_scan;Pfam:PF04069; E()=1.9E-64;score=217.1;query 25-295;description=OpuAC; putative ABC transporter periplasmic binding protein complement(1566842..1567744) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759881 YP_005232548.1 CDS STMMW_14941 NC_016854.1 1567773 1568483 R pfam_scan;Pfam:PF00528; E()=7.7E-25;score=87.0;query61- 232;description=BPD_transp_1; tmhmm; query 1-237; putative ABC transporter membrane protein complement(1567773..1568483) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759882 YP_005232549.1 CDS STMMW_14951 NC_016854.1 1568788 1569402 R pfam_scan;Pfam:PF02613; E()=1.4E-32;score=112.0;query 37-164;description=Nitrate_red_del; hypothetical protein complement(1568788..1569402) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759883 YP_005232550.1 CDS STMMW_14961 NC_016854.1 1569445 1570302 R pfam_scan;Pfam:PF04976; E()=1.4E-108;score=361.8;query 1-275;description=DmsC; tmhmm; query 1-286; putative dimethyl sulfoxide reductase subunit complement(1569445..1570302) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759884 YP_005232551.1 CDS STMMW_14971 NC_016854.1 1570304 1570921 R pfam_scan;Pfam:PF00037; E()=2.6E-7;score=29.3;query 92-114;description=Fer4; putative anaerobic dimethyl sulfoxide reductase complement(1570304..1570921) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759885 YP_005232552.1 CDS STMMW_14981 NC_016854.1 1570932 1573367 R pfam_scan;Pfam:PF00384; E()=1.7E-58;score=198.1;query 118-569;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=1.2E-8;score=34.3;query 57-115;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=7.7E-26;score=89.4;query690- 803;description=Molydop_binding; putative dimethyl sulfoxide reductase subunit complement(1570932..1573367) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759886 YP_005232553.1 CDS STMMW_14991 NC_016854.1 1573466 1575907 R pfam_scan;Pfam:PF00384; E()=1.8E-63;score=214.4;query 116-570;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=2.7E-8;score=33.1;query 55-113;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=3.9E-26;score=90.4;query692- 805;description=Molydop_binding; putative dimethyl sulfoxide reductase subunit complement(1573466..1575907) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759887 YP_005232554.1 CDS STMMW_15001 NC_016854.1 1576061 1576369 R pfam_scan;Pfam:PF06649; E()=8.1E-30;score=102.0;query 2-80;description=DUF1161; hypothetical protein complement(1576061..1576369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759888 YP_005232555.1 CDS STMMW_15011 NC_016854.1 1576464 1577183 D pfam_scan;Pfam:PF06788; E()=1.5E-140;score=465.9;query 4-239;description=UPF0257; hypothetical protein 1576464..1577183 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759889 YP_005232556.1 CDS STMMW_15021 NC_016854.1 1577224 1577784 R pfam_scan;Pfam:PF00583; E()=9.7E-17;score=60.4;query63- 141;description=Acetyltransf_1; spermidine N1-acetyltransferase complement(1577224..1577784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759890 YP_005232557.1 CDS STMMW_15031 NC_016854.1 1577820 1578161 R pfam_scan;Pfam:PF06932; E()=2.0E-54;score=181.9;query 5-113;description=DUF1283; hypothetical protein complement(1577820..1578161) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759891 YP_005232558.1 CDS STMMW_15041 NC_016854.1 1578314 1578640 D pfam_scan;Pfam:PF02694; E()=2.2E-46;score=156.0;query 1-107;description=UPF0060; tmhmm; query 1-109; hypothetical protein 1578314..1578640 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759892 YP_005232559.1 CDS STMMW_15051 NC_016854.1 1578762 1579976 D pfam_scan;Pfam:PF01188; E()=4.7E-10;score=39.2;query130-259;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=2.1E-34;score=117.8;query 14-110;description=MR_MLE_N; starvation sensing protein RspA 1578762..1579976 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759893 YP_005232560.1 CDS STMMW_15061 NC_016854.1 1579987 1581006 D pfam_scan;Pfam:PF08240; E()=3.0E-37;score=126.2;query 24-130;description=ADH_N; pfam_scan;Pfam:PF00107; E()=2.1E-23;score=82.6;query162- 297;description=ADH_zinc_N; starvation sensing protein RspB 1579987..1581006 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759894 YP_005232561.1 CDS STMMW_15081 NC_016854.1 1582583 1584049 D pfam_scan;Pfam:PF01232; E()=6.8E-49;score=165.7;query 23-185;description=Mannitol_dh; pfam_scan;Pfam:PF08125; E()=1.6E-90;score=301.9;query 213-459;description=Mannitol_dh_C; putative D-mannonate oxidoreductase 1582583..1584049 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759896 YP_005232562.1 CDS STMMW_15091 NC_016854.1 1584116 1584319 R hypothetical protein complement(1584116..1584319) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759897 YP_005232563.1 CDS STMMW_15101 NC_016854.1 1584500 1585186 R pfam_scan;Pfam:PF00392; E()=1.6E-16;score=59.5;query15-75;description=GntR; pfam_scan;Pfam:PF07729; E()=5.1E-26;score=90.7;query89-208;description=FCD; putative regulatory protein complement(1584500..1585186) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759898 YP_005232564.1 CDS STMMW_15111 NC_016854.1 1585316 1586062 R pfam_scan;Pfam:PF00106; E()=8.8E-29;score=100.2;query 2-164;description=adh_short; putative oxidoreductase complement(1585316..1586062) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759899 YP_005232565.1 CDS STMMW_15121 NC_016854.1 1586201 1588243 D pfam_scan;Pfam:PF01432; E()=1.8E-136;score=455.0;query 229-675;description=Peptidase_M3; dipeptidyl carboxypeptidase II 1586201..1588243 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759900 YP_005232566.1 CDS STMMW_15131 NC_016854.1 1588588 1588770 D pfam_scan;Pfam:PF10685; E()=6.3E-10;score=38.2;query10-31;description=KGG; hypothetical protein 1588588..1588770 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759901 YP_005232567.1 CDS STMMW_15141 NC_016854.1 1588890 1589417 R pfam_scan;Pfam:PF02464; E()=3.2E-48;score=162.8;query 18-168;description=CinA; hypothetical protein complement(1588890..1589417) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759902 YP_005232568.1 CDS STMMW_15151 NC_016854.1 1589844 1590236 D pfam_scan;Pfam:PF04076; E()=2.4E-41;score=140.0;query 1-130;description=BOF; hypothetical protein 1589844..1590236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759903 YP_005232569.1 CDS STMMW_15171 NC_016854.1 1592331 1593233 D pfam_scan;Pfam:PF00892; E()=1.8E-13;score=50.3;query15-131;description=DUF6; tmhmm; query 1-301; hypothetical protein 1592331..1593233 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759905 YP_005232570.1 CDS STMMW_15181 NC_016854.1 1593352 1593567 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.994; 0.996; multiple antibiotic resistance protein MarB complement(1593352..1593567) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759906 YP_005232571.1 CDS STMMW_15191 NC_016854.1 1593596 1594030 R pfam_scan;Pfam:PF00165; E()=5.3E-6;score=25.9;query 35-76;description=HTH_AraC; multiple antibiotic resistance protein MarA complement(1593596..1594030) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759907 YP_005232572.1 CDS STMMW_15201 NC_016854.1 1593999 1594433 R pfam_scan;Pfam:PF01047; E()=7.7E-20;score=69.8;query38-98;description=MarR; multiple antibiotic resistance protein MarR complement(1593999..1594433) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759908 YP_005232573.1 CDS STMMW_15211 NC_016854.1 1594692 1595357 D pfam_scan;Pfam:PF01914; E()=3.4E-61;score=205.8;query 6-217;description=MarC; tmhmm; query 1-222; hypothetical protein 1594692..1595357 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759909 YP_005232574.1 CDS STMMW_15221 NC_016854.1 1595404 1596588 R pfam_scan;Pfam:PF07690; E()=7.3E-38;score=130.4;query 18-326;description=MFS_1; tmhmm; query 1-395; sugar efflux transporter; putative membrane transport protein complement(1595404..1596588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759910 YP_005232575.1 CDS STMMW_15231 NC_016854.1 1596704 1597576 R pfam_scan;Pfam:PF00126; E()=2.0E-16;score=59.2;query3-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=3.8E-47;score=159.7;query 85-286;description=LysR_substrate; putative regulatory protein complement(1596704..1597576) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759911 YP_005232576.1 CDS STMMW_15241 NC_016854.1 1597679 1599067 D pfam_scan;Pfam:PF00171; E()=2.8E-142;score=473.8;query 10-457;description=Aldedh; putative oxidoreductase 1597679..1599067 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759912 YP_005232577.1 CDS STMMW_15251 NC_016854.1 1599140 1600066 D pfam_scan;Pfam:PF04960; E()=6.0E-127;score=422.3;query 24-308;description=Glutaminase; glutaminase 1599140..1600066 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759913 YP_005232578.1 CDS STMMW_15261 NC_016854.1 1600066 1600425 D hypothetical protein 1600066..1600425 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759914 YP_005232579.1 CDS STMMW_15271 NC_016854.1 1600649 1601596 D pfam_scan;Pfam:PF01062; E()=2.8E-101;score=337.6;query 21-294;description=Bestrophin; tmhmm; query 1-316; hypothetical protein 1600649..1601596 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759915 YP_005232580.1 CDS STMMW_15281 NC_016854.1 1601652 1602194 R pfam_scan;Pfam:PF08332; E()=5.2E-7;score=28.9;query 44-170;description=CaMKII_AD; hypothetical protein complement(1601652..1602194) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759916 YP_005232581.1 CDS STMMW_15291 NC_016854.1 1603013 1604029 D pfam_scan;Pfam:PF00267; E()=3.7E-127;score=423.6;query 2-338;description=Porin_1; outer membrane protein 1603013..1604029 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759917 YP_005232582.1 CDS STMMW_15301 NC_016854.1 1604170 1604511 R pfam_scan;Pfam:PF01155; E()=5.3E-34;score=115.9;query 1-113;description=HypA; hydrogenase nickel incorporation protein (HypA) complement(1604170..1604511) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759918 YP_005232583.1 CDS STMMW_15311 NC_016854.1 1604524 1605411 R putative ATP/GTP-binding protein complement(1604524..1605411) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759919 YP_005232584.1 CDS STMMW_15321 NC_016854.1 1605399 1606460 R pfam_scan;Pfam:PF04809; E()=1.6E-7;score=30.7;query 84-146;description=HupH_C; pfam_scan;Pfam:PF00301; E()=2.0E-17;score=62.0;query295- 341;description=Rubredoxin; hydrogenase-1 operon protein HyaF2 complement(1605399..1606460) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759920 YP_005232585.1 CDS STMMW_15331 NC_016854.1 1606478 1606888 R pfam_scan;Pfam:PF07449; E()=1.5E-35;score=121.1;query 14-114;description=HyaE; hydrogenase-1 operon protein HyaE2 complement(1606478..1606888) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759921 YP_005232586.1 CDS STMMW_15341 NC_016854.1 1606885 1607229 R pfam_scan;Pfam:PF01455; E()=8.6E-13;score=48.1;query16-81;description=HupF_HypC; hydrogenase isoenzymes formation protein complement(1606885..1607229) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759922 YP_005232587.1 CDS STMMW_15351 NC_016854.1 1607184 1607792 R pfam_scan;Pfam:PF01750; E()=2.3E-37;score=127.0;query 21-147;description=HycI; hydrogenase 1 maturation protease complement(1607184..1607792) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759923 YP_005232588.1 CDS STMMW_15361 NC_016854.1 1607798 1608541 R pfam_scan;Pfam:PF00033; E()=2.1E-34;score=118.3;query 35-242;description=Cytochrom_B_N; tmhmm; query 1-248; Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 complement(1607798..1608541) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759924 YP_005232589.1 CDS STMMW_15371 NC_016854.1 1608492 1610294 R pfam_scan;Pfam:PF00374; E()=1.6E-241;score=802.0;query 54-585;description=NiFeSe_Hases; uptake hydrogenase-1 large subunit complement(1608492..1610294) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759925 YP_005232590.1 CDS STMMW_15381 NC_016854.1 1610297 1611400 R pfam_scan;Pfam:PF01058; E()=1.7E-27;score=95.2;query62- 207;description=Oxidored_q6; tmhmm; query 1-368; uptake hydrogenase small subunit complement(1610297..1611400) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759926 YP_005232591.1 CDS STMMW_15391 NC_016854.1 1611829 1612920 D pfam_scan;Pfam:PF02275; E()=3.1E-42;score=144.7;query 25-347;description=CBAH; putative secreted hydrolase 1611829..1612920 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759927 YP_005232592.1 CDS STMMW_15401 NC_016854.1 1612966 1613757 D pfam_scan;Pfam:PF00392; E()=4.4E-17;score=61.4;query51-114;description=GntR; pfam_scan;Pfam:PF07729; E()=1.7E-24;score=85.8;query128-255;description=FCD; putative regulatory protein 1612966..1613757 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759928 YP_005232593.1 CDS STMMW_15411 NC_016854.1 1613816 1614841 R pfam_scan;Pfam:PF08240; E()=1.5E-32;score=111.1;query 26-134;description=ADH_N; pfam_scan;Pfam:PF00107; E()=1.4E-32;score=112.3;query 164-299;description=ADH_zinc_N; putative alcohol dehydrogenase complement(1613816..1614841) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759929 YP_005232594.1 CDS STMMW_15421 NC_016854.1 1614816 1616102 R pfam_scan;Pfam:PF07690; E()=1.5E-61;score=208.2;query 14-378;description=MFS_1; tmhmm; query 1-429; membrane transport protein complement(1614816..1616102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759930 YP_005232595.1 CDS STMMW_15431 NC_016854.1 1616279 1617835 R pfam_scan;Pfam:PF10142; E()=5.4E-137;score=456.3;query 63-433;description=PhoPQ_related; tmhmm; query 1-519; protein; PhoPQ-activated protein complement(1616279..1617835) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759931 YP_005232596.1 CDS STMMW_15441 NC_016854.1 1617905 1619146 R pfam_scan;Pfam:PF07690; E()=9.2E-33;score=113.6;query 25-276;description=MFS_1; tmhmm; query 1-414; putative multidrug efflux protein complement(1617905..1619146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759932 YP_005232597.1 CDS STMMW_15451 NC_016854.1 1619136 1620641 R pfam_scan;Pfam:PF01494; E()=3.5E-80;score=269.2;query 7-345;description=FAD_binding_3; putative monooxygenase complement(1619136..1620641) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759933 YP_005232598.1 CDS STMMW_15461 NC_016854.1 1620686 1621174 D pfam_scan;Pfam:PF01047; E()=1.9E-12;score=46.2;query49-104;description=MarR; putative regulatory protein 1620686..1621174 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759934 YP_005232599.1 CDS STMMW_15482 NC_016854.1 1622441 1622650 R hypothetical protein complement(1622441..1622650) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759937 YP_005232600.1 CDS STMMW_15491 NC_016854.1 1622920 1624386 R hypothetical protein complement(1622920..1624386) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759938 YP_005232601.1 CDS STMMW_15501 NC_016854.1 1624645 1625652 D pfam_scan;Pfam:PF00356; E()=1.4E-17;score=62.9;query3-48;description=LacI; pfam_scan;Pfam:PF00532; E()=7.5E-26;score=90.5;query61- 302;description=Peripla_BP_1; putative LacI family transcriptional regulator 1624645..1625652 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759939 YP_005232602.1 CDS STMMW_15511 NC_016854.1 1625796 1627247 D pfam_scan;Pfam:PF03553; E()=2.6E-69;score=233.6;query 163-464;description=Na_H_antiporter; tmhmm; query 1-484; putative Na+/H+ antiporter 1625796..1627247 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759940 YP_005232603.1 CDS STMMW_15521 NC_016854.1 1627260 1628462 D pfam_scan;Pfam:PF00155; E()=8.5E-41;score=139.8;query 36-384;description=Aminotran_1_2; putative aminotransferase 1627260..1628462 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759941 YP_005232604.1 CDS STMMW_15531 NC_016854.1 1628575 1630650 R pfam_scan;Pfam:PF00128; E()=1.2E-23;score=83.0;query182-554;description=Alpha- amylase; pfam_scan;Pfam:PF02922; E()=1.7E-18;score=65.8;query16-104;description=CBM_48; putative glycogen debranching protein complement(1628575..1630650) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759942 YP_005232605.1 CDS STMMW_15541 NC_016854.1 1630707 1633235 R pfam_scan;Pfam:PF00128; E()=2.0E-19;score=69.1;query24-109;description=Alpha- amylase; putative hydrolase complement(1630707..1633235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759943 YP_005232606.1 CDS STMMW_15551 NC_016854.1 1633232 1635016 R pfam_scan;Pfam:PF00128; E()=3.9E-19;score=68.2;query126-210;description=Alpha- amylase; putative hydrolase complement(1633232..1635016) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759944 YP_005232607.1 CDS STMMW_15561 NC_016854.1 1635145 1635930 R pfam_scan;Pfam:PF06884; E()=4.4E-77;score=256.6;query 50-217;description=DUF1264; hypothetical protein complement(1635145..1635930) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759945 YP_005232608.1 CDS STMMW_15571 NC_016854.1 1636073 1636402 R tmhmm; query 1-110; hypothetical protein complement(1636073..1636402) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759946 YP_005232609.1 CDS STMMW_15581 NC_016854.1 1636752 1637183 R pfam_scan;Pfam:PF02566; E()=7.1E-19;score=67.6;query43-139;description=OsmC; osmotically inducible protein C complement(1636752..1637183) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759947 YP_005232610.1 CDS STMMW_15591 NC_016854.1 1637696 1637911 D pfam_scan;Pfam:PF10684; E()=3.3E-42;score=141.9;query 1-71;description=BDM; hypothetical protein 1637696..1637911 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759948 YP_005232611.1 CDS STMMW_15601 NC_016854.1 1638006 1638149 D pfam_scan;Pfam:PF08136; E()=1.2E-36;score=123.4;query 1-47;description=Ribosomal_S22; 30S ribosomal protein S22 1638006..1638149 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759949 YP_005232612.1 CDS STMMW_15611 NC_016854.1 1638326 1640023 D pfam_scan;Pfam:PF00390; E()=5.7E-83;score=276.6;query 81-269;description=malic; pfam_scan;Pfam:PF03949; E()=4.8E-93;score=310.8;query 271-530;description=Malic_M; malate oxidoreductase; NAD-linked malic enzyme 1638326..1640023 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759950 YP_005232613.1 CDS STMMW_15621 NC_016854.1 1640390 1641319 D pfam_scan;Pfam:PF08240; E()=3.6E-30;score=103.4;query 2-104;description=ADH_N; pfam_scan;Pfam:PF00107; E()=4.2E-37;score=127.0;query 134-271;description=ADH_zinc_N; alcohol dehydrogenase 1640390..1641319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759951 YP_005232614.1 CDS STMMW_15631 NC_016854.1 1641410 1642051 R pfam_scan;Pfam:PF00033; E()=5.9E-25;score=87.5;query4- 181;description=Cytochrom_B_N; tmhmm; query 1-214; formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit (formate dehydrogenase-n gamma subunit) (fdh-n gamma subunit) (anaerobic formate dehydrogenase cytochrome b556 subunit) complement(1641410..1642051) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759952 YP_005232615.1 CDS STMMW_15641 NC_016854.1 1642059 1642943 R pfam_scan;Pfam:PF09163; E()=8.9E-18;score=63.2;query246-289;description=Form- deh_trans; pfam_scan;Pfam:PF00037; E()=2.5E-5;score=23.0;query 129-147;description=Fer4; formate dehydrogenase, nitrate-inducible, iron-sulfur subunit (formate dehydrogenase-n beta subunit) (fdh-n beta subunit) (anaerobic formate dehydrogenase iron-sulfur subunit) complement(1642059..1642943) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759953 YP_005232616.1 CDS STMMW_15651 NC_016854.1 1642957 1646004 R note this CDS contains a selenocysteine tRNA suppressible stop codon; pfam_scan;Pfam:PF00384; E()=2.9E-28;score=98.7;query107- 588;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=6.8E-15;score=54.2;query44- 104;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=5.8E-16;score=57.6;query892- 1007;description=Molydop_binding; formate dehydrogenase N (nitrate-inducible, alpha subunit) complement(join(1642957..1645416,1645420..1646004)) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759954 YP_005232617.1 CDS STMMW_15661 NC_016854.1 1646339 1647163 D pfam_scan;Pfam:PF00892; E()=9.0E-7;score=28.6;query 12-118;description=DUF6; tmhmm; query 1-275; putative integral membrane protein 1646339..1647163 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759955 YP_005232618.1 CDS STMMW_15671 NC_016854.1 1647688 1648776 D pfam_scan;Pfam:PF00267; E()=3.1E-149;score=496.2;query 27-362;description=Porin_1; outer membrane porin protein (ompD) 1647688..1648776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759956 YP_005232619.1 CDS STMMW_15681 NC_016854.1 1648920 1649300 D pfam_scan;Pfam:PF04828; E()=1.8E-14;score=52.9;query5-94;description=GFA; hypothetical protein 1648920..1649300 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759957 YP_005232620.1 CDS STMMW_15691 NC_016854.1 1649325 1650812 R pfam_scan;Pfam:PF07690; E()=8.6E-41;score=140.0;query 12-403;description=MFS_1; tmhmm; query 1-496; methyl viologen resistance protein SmvA complement(1649325..1650812) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759958 YP_005232621.1 CDS STMMW_15701 NC_016854.1 1650929 1651507 D pfam_scan;Pfam:PF00440; E()=5.8E-11;score=41.4;query13-55;description=TetR_N; tmhmm; query 1-193; putative regulatory protein 1650929..1651507 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759959 YP_005232622.1 CDS STMMW_15711 NC_016854.1 1651722 1653110 D pfam_scan;Pfam:PF07690; E()=1.8E-13;score=50.2;query44-372;description=MFS_1; tmhmm; query 1-463; nitrite extrusion protein 1651722..1653110 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759960 YP_005232623.1 CDS STMMW_15721 NC_016854.1 1653202 1656942 D pfam_scan;Pfam:PF00384; E()=3.1E-65;score=220.2;query 108-831;description=Molybdopterin; pfam_scan;Pfam:PF01568; E()=4.3E-19;score=67.7;query1086- 1196;description=Molydop_binding; respiratory nitrate reductase 2 alpha chain 1653202..1656942 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759961 YP_005232624.1 CDS STMMW_15731 NC_016854.1 1656939 1658483 D respiratory nitrate reductase 2 subunit beta 1656939..1658483 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759962 YP_005232625.1 CDS STMMW_15741 NC_016854.1 1658483 1659178 D pfam_scan;Pfam:PF02613; E()=4.5E-25;score=87.7;query5- 154;description=Nitrate_red_del; respiratory nitrate reductase 2 subunit delta 1658483..1659178 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759963 YP_005232626.1 CDS STMMW_15751 NC_016854.1 1659175 1659855 D pfam_scan;Pfam:PF02665; E()=1.1E-88;score=295.8;query 5-226;description=Nitrate_red_gam; tmhmm; query 1-227; respiratory nitrate reductase 2 gamma chain 1659175..1659855 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759964 YP_005232627.1 CDS STMMW_15761 NC_016854.1 1659961 1660854 D pfam_scan;Pfam:PF02567; E()=1.5E-83;score=280.2;query 8-290;description=PhzC-PhzF; hypothetical protein 1659961..1660854 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759965 YP_005232628.1 CDS STMMW_15771 NC_016854.1 1660890 1661735 R pfam_scan;Pfam:PF00797; E()=1.6E-83;score=279.3;query 21-255;description=Acetyltransf_2; N-hydroxyarylamine O-acetyltransferase complement(1660890..1661735) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759966 YP_005232629.1 CDS STMMW_15781 NC_016854.1 1662019 1662651 R hypothetical protein complement(1662019..1662651) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759967 YP_005232630.1 CDS STMMW_15791 NC_016854.1 1663164 1664657 D pfam_scan;Pfam:PF00324; E()=2.7E-145;score=483.9;query 35-476;description=AA_permease; tmhmm; query 1-498; L-asparagine permease 1663164..1664657 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759968 YP_005232631.1 CDS STMMW_15801 NC_016854.1 1664734 1664955 R pfam_scan;Pfam:PF06004; E()=9.6E-23;score=79.2;query23-71;description=DUF903; tmhmm; query 1-74; putative lipoprotein complement(1664734..1664955) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759969 YP_005232632.1 CDS STMMW_15811 NC_016854.1 1665100 1666161 R Signal peptide; signalp; query 1-31;cleavage_site_probability=0.987; 1.000; ATP-binding protein complement(1665100..1666161) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759970 YP_005232633.1 CDS STMMW_15821 NC_016854.1 1666425 1668545 D pfam_scan;Pfam:PF07715; E()=3.6E-23;score=81.4;query47-157;description=Plug; pfam_scan;Pfam:PF00593; E()=4.5E-46;score=157.5;query 454-703;description=TonB_dep_Rec; TonB-dependent receptor YncD 1666425..1668545 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759971 YP_005232634.1 CDS STMMW_15831 NC_016854.1 1668612 1669277 R pfam_scan;Pfam:PF00392; E()=1.0E-11;score=44.2;query13-74;description=GntR; pfam_scan;Pfam:PF07729; E()=1.7E-19;score=69.6;query84-209;description=FCD; putative regulatory protein complement(1668612..1669277) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759972 YP_005232635.1 CDS STMMW_15841 NC_016854.1 1669611 1670681 R pfam_scan;Pfam:PF00107; E()=1.2E-16;score=60.7;query161- 303;description=ADH_zinc_N; putative NADP-dependent oxidoreductase complement(1669611..1670681) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759973 YP_005232636.1 CDS STMMW_15851 NC_016854.1 1670860 1671375 D pfam_scan;Pfam:PF00583; E()=1.3E-18;score=66.3;query57- 137;description=Acetyltransf_1; putative acetyltransferase 1670860..1671375 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759974 YP_005232637.1 CDS STMMW_15861 NC_016854.1 1671375 1671824 D pfam_scan;Pfam:PF04657; E()=5.7E-19;score=68.2;query6-143;description=DUF606; tmhmm; query 1-150; hypothetical protein 1671375..1671824 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759975 YP_005232638.1 CDS STMMW_15871 NC_016854.1 1671829 1672062 R pfam_scan;Pfam:PF10735; E()=2.3E-45;score=151.7;query 1-77;description=DUF2526; hypothetical protein complement(1671829..1672062) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759976 YP_005232639.1 CDS STMMW_15881 NC_016854.1 1672286 1673605 D putative virulence effector protein 1672286..1673605 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759977 YP_005232640.1 CDS STMMW_15891 NC_016854.1 1673610 1676591 D pfam_scan;Pfam:PF07520; E()=0.0;score=1511.4;query 1-992;description=SrfB; putative virulence effector protein 1673610..1676591 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759978 YP_005232641.1 CDS STMMW_15901 NC_016854.1 1676588 1678732 D pfam_scan;Pfam:PF10139; E()=5.4E-135;score=450.7;query 12-415;description=Virul_Fac; putative virulence effector protein 1676588..1678732 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759979 YP_005232642.1 CDS STMMW_15911 NC_016854.1 1678777 1679040 R pfam_scan;Pfam:PF10753; E()=1.8E-25;score=87.6;query33-87;description=DUF2566; tmhmm; query 1-88; hypothetical protein complement(1678777..1679040) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759980 YP_005232643.1 CDS STMMW_15921 NC_016854.1 1679349 1680794 R pfam_scan;Pfam:PF00171; E()=3.2E-168;score=559.3;query 19-477;description=Aldedh; putative aldehyde dehydrogenase complement(1679349..1680794) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759981 YP_005232644.1 CDS STMMW_15931 NC_016854.1 1680909 1682333 R pfam_scan;Pfam:PF00392; E()=7.2E-13;score=47.9;query4-66;description=GntR; pfam_scan;Pfam:PF00155; E()=1.0E-33;score=116.5;query 139-456;description=Aminotran_1_2; putative regulatory protein complement(1680909..1682333) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759982 YP_005232645.1 CDS STMMW_15941 NC_016854.1 1682469 1683239 R pfam_scan;Pfam:PF01427; E()=1.2E-22;score=80.2;query32- 158;description=Peptidase_M15; D-alanyl-D-alanine dipeptidase complement(1682469..1683239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759983 YP_005232646.1 CDS STMMW_15951 NC_016854.1 1683498 1683728 R hypothetical protein complement(1683498..1683728) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759984 YP_005232647.1 CDS STMMW_15961 NC_016854.1 1683761 1684159 R tmhmm; query 1-133; hypothetical protein complement(1683761..1684159) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759985 YP_005232648.1 CDS STMMW_15971 NC_016854.1 1684696 1685646 D pfam_scan;Pfam:PF06767; E()=1.5E-41;score=142.1;query 1-302;description=Sif; putative virulence effector protein 1684696..1685646 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759986 YP_005232649.1 CDS STMMW_15981 NC_016854.1 1685920 1686150 D pfam_scan;Pfam:PF10829; E()=7.3E-49;score=163.0;query 1-76;description=DUF2554; hypothetical protein 1685920..1686150 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759987 YP_005232650.1 CDS STMMW_15991 NC_016854.1 1686151 1688115 R pfam_scan;Pfam:PF01136; E()=1.5E-71;score=240.0;query 79-306;description=Peptidase_U32; putative peptidase complement(1686151..1688115) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759988 YP_005232651.1 CDS STMMW_16001 NC_016854.1 1688194 1688730 R pfam_scan;Pfam:PF07883; E()=9.6E-9;score=34.4;query 106-171;description=Cupin_2; pfam_scan;Pfam:PF01381; E()=1.3E-14;score=53.2;query12-65;description=HTH_3; putative DNA-binding protein complement(1688194..1688730) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759989 YP_005232652.1 CDS STMMW_16011 NC_016854.1 1688821 1689999 D pfam_scan;Pfam:PF03594; E()=1.6E-146;score=487.6;query 7-380;description=BenE; tmhmm; query 1-393; putative benzoate membrane transport protein 1688821..1689999 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759990 YP_005232653.1 CDS STMMW_16021 NC_016854.1 1690053 1690721 R pfam_scan;Pfam:PF11769; E()=2.7E-73;score=245.5;query 16-215;description=DUF3313; putative lipoprotein complement(1690053..1690721) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759991 YP_005232654.1 CDS STMMW_16031 NC_016854.1 1690877 1691473 R pfam_scan;Pfam:PF03848; E()=1.1E-96;score=321.0;query 1-193;description=TehB; tellurite resistance protein TehB complement(1690877..1691473) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759992 YP_005232655.1 CDS STMMW_16041 NC_016854.1 1691460 1692473 R pfam_scan;Pfam:PF03595; E()=4.2E-57;score=193.1;query 16-273;description=C4dic_mal_tran; tmhmm; query 1-338; tellurite resistance protein TehA complement(1691460..1692473) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759993 YP_005232656.1 CDS STMMW_16051 NC_016854.1 1692580 1693560 D putative transferase 1692580..1693560 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759994 YP_005232657.1 CDS STMMW_16061 NC_016854.1 1693557 1694096 R pfam_scan;Pfam:PF00583; E()=4.0E-9;score=36.1;query 75-151;description=Acetyltransf_1; ribosomal-protein-serine acetyltransferase complement(1693557..1694096) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759995 YP_005232658.1 CDS STMMW_16071 NC_016854.1 1694313 1695431 D pfam_scan;Pfam:PF05343; E()=2.0E-91;score=305.7;query 46-346;description=Peptidase_M42; hypothetical protein 1694313..1695431 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759996 YP_005232659.1 CDS STMMW_16081 NC_016854.1 1695428 1695709 D pfam_scan;Pfam:PF02302; E()=3.8E-12;score=46.4;query4-60;description=PTS_IIB; putative phosphotransferase enzyme 1695428..1695709 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759997 YP_005232660.1 CDS STMMW_16091 NC_016854.1 1695861 1697033 D pfam_scan;Pfam:PF03611; E()=2.4E-73;score=246.9;query 2-341;description=EIIC-GAT; tmhmm; query 1-391; putative phosphotransferase enzyme 1695861..1697033 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759998 YP_005232661.1 CDS STMMW_16101 NC_016854.1 1697047 1697853 D pfam_scan;Pfam:PF03437; E()=2.2E-100;score=334.9;query 10-264;description=BtpA; hypothetical protein 1697047..1697853 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759999 YP_005232662.1 CDS STMMW_16111 NC_016854.1 1697985 1698422 D pfam_scan;Pfam:PF00359; E()=7.3E-26;score=90.2;query3-141;description=PTS_EIIA_2; putative phosphotransferase enzyme 1697985..1698422 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760000 YP_005232663.1 CDS STMMW_16121 NC_016854.1 1698434 1699066 D pfam_scan;Pfam:PF00834; E()=1.0E-61;score=207.3;query 3-196;description=Ribul_P_3_epim; putative ribulose-5-phosphate 3-epimerase 1698434..1699066 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760001 YP_005232664.1 CDS STMMW_16131 NC_016854.1 1699082 1699873 D pfam_scan;Pfam:PF00455; E()=1.4E-50;score=170.7;query 81-235;description=DeoR; pfam_scan;Pfam:PF08220; E()=1.1E-15;score=56.3;query8-65;description=HTH_DeoR; putative regulatory protein 1699082..1699873 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760002 YP_005232665.1 CDS STMMW_16141 NC_016854.1 1699873 1700310 D pfam_scan;Pfam:PF00583; E()=9.6E-17;score=60.4;query50- 133;description=Acetyltransf_1; aminoglycoside 6'-N-acetyltransferase 1699873..1700310 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760003 YP_005232666.1 CDS STMMW_16151 NC_016854.1 1700357 1701559 R pfam_scan;Pfam:PF01070; E()=2.6E-116;score=387.9;query 49-391;description=FMN_dh; putative L-lactate oxidase complement(1700357..1701559) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760004 YP_005232667.1 CDS STMMW_16161 NC_016854.1 1701571 1702146 R pfam_scan;Pfam:PF04264; E()=8.1E-38;score=129.6;query 26-188;description=YceI; hypothetical protein complement(1701571..1702146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760005 YP_005232668.1 CDS STMMW_16171 NC_016854.1 1702342 1703997 R pfam_scan;Pfam:PF04349; E()=2.6E-150;score=500.5;query 45-534;description=MdoG; Glucans biosynthesis protein D precursor complement(1702342..1703997) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760006 YP_005232669.1 CDS STMMW_16181 NC_016854.1 1704217 1705725 R pfam_scan;Pfam:PF00135; E()=3.1E-104;score=349.1;query 8-458;description=COesterase; putative esterase complement(1704217..1705725) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760007 YP_005232670.1 CDS STMMW_16191 NC_016854.1 1705774 1707117 R pfam_scan;Pfam:PF07063; E()=3.9E-39;score=132.9;query 333-444;description=DUF1338; hypothetical protein complement(1705774..1707117) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760008 YP_005232671.1 CDS STMMW_16201 NC_016854.1 1707410 1708333 D pfam_scan;Pfam:PF00126; E()=6.8E-18;score=63.9;query13-72;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.9E-35;score=120.1;query 100-304;description=LysR_substrate; putative LysR family transcriptional regulatory protein 1707410..1708333 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760009 YP_005232672.1 CDS STMMW_16211 NC_016854.1 1708394 1710019 R pfam_scan;Pfam:PF00672; E()=1.7E-13;score=49.8;query209-277;description=HAMP; pfam_scan;Pfam:PF02203; E()=4.3E-22;score=78.2;query55-188;description=TarH; pfam_scan;Pfam:PF00015; E()=5.7E-69;score=231.7;query 337-530;description=MCPsignal; tmhmm; query 1-542; methyl-accepting chemotaxis protein III (mcp-iii) (ribose and galactose chemoreceptor protein) complement(1708394..1710019) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760010 YP_005232673.1 CDS STMMW_16221 NC_016854.1 1710188 1711306 R deleted EC_number 1.2.1.1; pfam_scan;Pfam:PF08240; E()=9.3E-27;score=92.5;query28-149;description=ADH_N; pfam_scan;Pfam:PF00107; E()=2.3E-30;score=105.2;query 186-328;description=ADH_zinc_N; alcohol dehydrogenase class III complement(1710188..1711306) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760011 YP_005232674.1 CDS STMMW_16231 NC_016854.1 1711338 1711613 R pfam_scan;Pfam:PF02583; E()=1.8E-23;score=81.6;query6-89;description=DUF156; hypothetical protein complement(1711338..1711613) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760012 YP_005232675.1 CDS STMMW_16241 NC_016854.1 1712136 1712537 D hypothetical protein 1712136..1712537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760013 YP_005232676.1 CDS STMMW_16251 NC_016854.1 1712666 1713382 R tmhmm; query 1-239; hypothetical protein complement(1712666..1713382) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760014 YP_005232677.1 CDS STMMW_16261 NC_016854.1 1713808 1715034 D pfam_scan;Pfam:PF00657; E()=2.8E-9;score=36.4;query 145-394;description=Lipase_GDSL; pfam_scan;Pfam:PF06767; E()=1.4E-8;score=33.7;query 1-108;description=Sif; translocated effector protein (SseJ) 1713808..1715034 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760015 YP_005232678.1 CDS STMMW_16271 NC_016854.1 1715155 1715499 R pfam_scan;Pfam:PF06961; E()=3.7E-24;score=83.8;query33-87;description=DUF1294; tmhmm; query 1-115; hypothetical protein complement(1715155..1715499) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760016 YP_005232679.1 CDS STMMW_16281 NC_016854.1 1716406 1717167 D pfam_scan;Pfam:PF00497; E()=1.8E-38;score=132.2;query 31-239;description=SBP_bac_3; putative periplasmic amino acid-binding protein 1716406..1717167 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760017 YP_005232680.1 CDS STMMW_16291 NC_016854.1 1717174 1717821 D pfam_scan;Pfam:PF00528; E()=6.9E-13;score=48.1;query33- 213;description=BPD_transp_1; tmhmm; query 1-216; putative ABC amino acid transporter permease 1717174..1717821 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760018 YP_005232681.1 CDS STMMW_16301 NC_016854.1 1717846 1718577 D pfam_scan;Pfam:PF00005; E()=2.3E-43;score=148.2;query 31-199;description=ABC_tran; ABC transporter ATP-binding protein 1717846..1718577 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760019 YP_005232682.1 CDS STMMW_16311 NC_016854.1 1718574 1719254 D pfam_scan;Pfam:PF00528; E()=1.0E-13;score=50.8;query38- 218;description=BPD_transp_1; tmhmm; query 1-227; putative amino acid ABC transporter 1718574..1719254 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760020 YP_005232683.1 CDS STMMW_16331 NC_016854.1 1721405 1722067 D pfam_scan;Pfam:PF08242; E()=1.5E-10;score=40.9;query54- 151;description=Methyltransf_12; methyltransferase 1721405..1722067 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760022 YP_005232684.1 CDS STMMW_16341 NC_016854.1 1722338 1722868 R pfam_scan;Pfam:PF00033; E()=1.5E-28;score=99.2;query4- 171;description=Cytochrom_B_N; tmhmm; query 1-177; cytochrome b561 (cytochrome b-561) complement(1722338..1722868) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760023 YP_005232685.1 CDS STMMW_16351 NC_016854.1 1722985 1723785 R pfam_scan;Pfam:PF02698; E()=4.6E-16;score=58.4;query38-178;description=DUF218; hypothetical protein complement(1722985..1723785) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760024 YP_005232686.1 CDS STMMW_16361 NC_016854.1 1723849 1727751 R pfam_scan;Pfam:PF07717; E()=1.9E-23;score=81.9;query599-699;description=DUF1605; pfam_scan;Pfam:PF00271; E()=1.7E-9;score=36.7;query 312-403;description=Helicase_C; pfam_scan;Pfam:PF00437; E()=1.0E-4;score=21.1;query 60-116;description=GSPII_E; pfam_scan;Pfam:PF04408; E()=2.1E-28;score=98.1;query465-558;description=HA2; ATP-dependent helicase HrpA complement(1723849..1727751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760025 YP_005232687.1 CDS STMMW_16371 NC_016854.1 1727952 1728557 D pfam_scan;Pfam:PF02525; E()=2.9E-57;score=193.1;query 2-197;description=Flavodoxin_2; ACP phosphodiesterase. Putative acyl carrier protein phosphodiesterase EC 3.1.4.14; ACP phosphodiesterase 1727952..1728557 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760026 YP_005232688.1 CDS STMMW_16381 NC_016854.1 1728554 1729003 R pfam_scan;Pfam:PF04828; E()=1.1E-9;score=37.7;query 30-106;description=GFA; hypothetical protein complement(1728554..1729003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760027 YP_005232689.1 CDS STMMW_16391 NC_016854.1 1729146 1729469 R pfam_scan;Pfam:PF07027; E()=6.7E-35;score=118.6;query 15-107;description=DUF1318; tmhmm; query 1-108; hypothetical protein complement(1729146..1729469) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760028 YP_005232690.1 CDS STMMW_16401 NC_016854.1 1729477 1729668 R Signal peptide; signalp; query 1-19;cleavage_site_probability=0.526; 0.997; putative lipoprotein complement(1729477..1729668) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760029 YP_005232691.1 CDS STMMW_16411 NC_016854.1 1729668 1732304 R pfam_scan;Pfam:PF11739; E()=1.4E-53;score=181.0;query 656-859;description=DctA-YdbH; tmhmm; query 1-879; hypothetical protein complement(1729668..1732304) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760030 YP_005232692.1 CDS STMMW_16421 NC_016854.1 1732544 1733533 D pfam_scan;Pfam:PF02826; E()=3.2E-52;score=176.3;query 110-297;description=2-Hacid_dh_C; pfam_scan;Pfam:PF00389; E()=7.0E-36;score=122.9;query 6-327;description=2-Hacid_dh; D-lactate dehydrogenase 1732544..1733533 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760031 YP_005232693.1 CDS STMMW_16431 NC_016854.1 1733644 1734054 D pfam_scan;Pfam:PF03724; E()=2.5E-17;score=62.2;query30-121;description=META; heat shock protein (hslJ) 1733644..1734054 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760032 YP_005232694.1 CDS STMMW_16441 NC_016854.1 1734098 1734253 R pfam_scan;Pfam:PF03891; E()=6.5E-10;score=38.1;query6-48;description=DUF333; hypothetical protein complement(1734098..1734253) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760033 YP_005232695.1 CDS STMMW_16451 NC_016854.1 1734280 1734579 D hypothetical protein 1734280..1734579 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760034 YP_005232696.1 CDS STMMW_16461 NC_016854.1 1734640 1738164 D pfam_scan;Pfam:PF10371; E()=1.9E-23;score=81.2;query624-679;description=EKR; pfam_scan;Pfam:PF00037; E()=1.3E-5;score=23.9;query 682-705;description=Fer4; pfam_scan;Pfam:PF01855; E()=3.1E-84;score=281.4;query 13-244;description=POR_N; pfam_scan;Pfam:PF01558; E()=1.1E-27;score=96.6;query426-608;description=POR; pyruvate-flavodoxin oxidoreductase 1734640..1738164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760035 YP_005232697.1 CDS STMMW_16471 NC_016854.1 1738646 1739080 D pfam_scan;Pfam:PF00582; E()=8.4E-31;score=107.0;query 1-144;description=Usp; hypothetical protein 1738646..1739080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760036 YP_005232698.1 CDS STMMW_16481 NC_016854.1 1739130 1739468 R pfam_scan;Pfam:PF00893; E()=5.3E-29;score=99.9;query6- 96;description=Multi_Drug_Res; tmhmm; query 1-113; Putative multi-drug transporter complement(1739130..1739468) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760037 YP_005232699.1 CDS STMMW_16501 NC_016854.1 1739824 1740759 D pfam_scan;Pfam:PF01171; E()=5.1E-15;score=54.9;query42-206;description=ATP_bind_3; hypothetical protein 1739824..1740759 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760039 YP_005232700.1 CDS STMMW_16511 NC_016854.1 1740803 1742176 R pfam_scan;Pfam:PF03880; E()=8.8E-22;score=76.2;query384-455;description=DbpA; pfam_scan;Pfam:PF00271; E()=4.8E-25;score=86.3;query261- 336;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=3.5E-54;score=183.1;query 27-192;description=DEAD; ATP-independent RNA helicase (DbpA) complement(1740803..1742176) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760040 YP_005232701.1 CDS STMMW_16521 NC_016854.1 1742663 1743646 R pfam_scan;Pfam:PF01544; E()=2.1E-67;score=227.0;query 38-323;description=CorA; tmhmm; query 1-328; putative membrane transport protein complement(1742663..1743646) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760041 YP_005232702.1 CDS STMMW_16531 NC_016854.1 1743792 1744946 R pfam_scan;Pfam:PF00015; E()=1.2E-49;score=168.5;query 168-357;description=MCPsignal; tmhmm; query 1-385; putative chemo-receptor protein complement(1743792..1744946) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760042 YP_005232703.1 CDS STMMW_16541 NC_016854.1 1745357 1745920 R pfam_scan;Pfam:PF01713; E()=6.9E-20;score=70.7;query88-169;description=Smr; hypothetical protein complement(1745357..1745920) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760043 YP_005232704.1 CDS STMMW_16551 NC_016854.1 1746178 1746693 D pfam_scan;Pfam:PF01035; E()=1.2E-33;score=114.1;query 87-168;description=DNA_binding_1; pfam_scan;Pfam:PF02870; E()=1.2E-14;score=53.8;query4- 83;description=Methyltransf_1N; O6-methylguanine-DNA-alkyltransferase 1746178..1746693 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760044 YP_005232705.1 CDS STMMW_16561 NC_016854.1 1746847 1747641 D pfam_scan;Pfam:PF00325; E()=7.8E-14;score=50.4;query207-238;description=Crp; pfam_scan;Pfam:PF00027; E()=3.4E-17;score=61.5;query65- 150;description=cNMP_binding; fumarate and nitrate reduction regulatory protein 1746847..1747641 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760045 YP_005232706.1 CDS STMMW_16571 NC_016854.1 1747792 1748739 D pfam_scan;Pfam:PF00582; E()=7.4E-15;score=55.4;query3-146;description=Usp; hypothetical protein 1747792..1748739 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760046 YP_005232707.1 CDS STMMW_16581 NC_016854.1 1748794 1749048 R pfam_scan;Pfam:PF10749; E()=1.4E-43;score=145.9;query 1-84;description=DUF2534; tmhmm; query 1-85; hypothetical protein complement(1748794..1749048) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760047 YP_005232708.1 CDS STMMW_16591 NC_016854.1 1749287 1750318 D pfam_scan;Pfam:PF00924; E()=1.1E-61;score=207.4;query 120-325;description=MS_channel; tmhmm; query 1-344; hypothetical protein 1749287..1750318 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760048 YP_005232709.1 CDS STMMW_16601 NC_016854.1 1750404 1751006 R pfam_scan;Pfam:PF07883; E()=8.9E-14;score=50.5;query126-194;description=Cupin_2; pfam_scan;Pfam:PF01381; E()=8.1E-11;score=41.1;query26-79;description=HTH_3; DNA-binding protein complement(1750404..1751006) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760049 YP_005232710.1 CDS STMMW_16611 NC_016854.1 1751050 1751736 D pfam_scan;Pfam:PF03483; E()=1.3E-11;score=43.9;query64-191;description=B3_4; hypothetical protein 1751050..1751736 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760050 YP_005232711.1 CDS STMMW_16621 NC_016854.1 1752208 1752765 R pfam_scan;Pfam:PF08534; E()=5.8E-5;score=22.5;query 72-178;description=Redoxin; putative thiol peroxidase complement(1752208..1752765) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760051 YP_005232712.1 CDS STMMW_16631 NC_016854.1 1752864 1753694 R tmhmm; query 1-277; hypothetical protein complement(1752864..1753694) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760052 YP_005232713.1 CDS STMMW_16641 NC_016854.1 1753715 1755697 R Signal peptide; signalp; query 1-28;cleavage_site_probability=0.545; 0.549; invasin-like protein complement(1753715..1755697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760053 YP_005232714.1 CDS STMMW_16651 NC_016854.1 1755772 1756617 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.535; 1.000; putative lipoprotein complement(1755772..1756617) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760054 YP_005232715.1 CDS STMMW_16671 NC_016854.1 1758160 1759269 D hypothetical protein 1758160..1759269 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760056 YP_005232716.1 CDS STMMW_16681 NC_016854.1 1759483 1759737 R pfam_scan;Pfam:PF06004; E()=6.6E-15;score=54.2;query30-77;description=DUF903; tmhmm; query 1-85; putative lipoprotein complement(1759483..1759737) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760057 YP_005232717.1 CDS STMMW_16691 NC_016854.1 1759848 1760438 R pfam_scan;Pfam:PF00440; E()=3.0E-10;score=39.2;query21-64;description=TetR_N; putative transcriptional regulator complement(1759848..1760438) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760058 YP_005232718.1 CDS STMMW_16701 NC_016854.1 1760516 1761229 D pfam_scan;Pfam:PF00106; E()=9.7E-23;score=80.6;query7-162;description=adh_short; putative oxidoreductase 1760516..1761229 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760059 YP_005232719.1 CDS STMMW_16711 NC_016854.1 1761320 1762189 R pfam_scan;Pfam:PF00248; E()=4.9E-53;score=179.4;query 15-263;description=Aldo_ket_red; putative oxidoreductase complement(1761320..1762189) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760060 YP_005232720.1 CDS STMMW_16721 NC_016854.1 1762463 1763368 R pfam_scan;Pfam:PF00126; E()=6.0E-16;score=57.7;query4-63;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.2E-41;score=141.8;query 88-294;description=LysR_substrate; putative transcriptional regulator complement(1762463..1763368) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760061 YP_005232721.1 CDS STMMW_16731 NC_016854.1 1763487 1764416 D pfam_scan;Pfam:PF05368; E()=6.9E-20;score=71.3;query12-246;description=NmrA; tmhmm; query 1-310; putative oxidoreductase 1763487..1764416 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760062 YP_005232722.1 CDS STMMW_16741 NC_016854.1 1764513 1766126 R pfam_scan;Pfam:PF00496; E()=2.9E-87;score=292.7;query 77-454;description=SBP_bac_5; periplasmic murein peptide-binding protein MppA complement(1764513..1766126) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760063 YP_005232723.1 CDS STMMW_16751 NC_016854.1 1766316 1767044 D pfam_scan;Pfam:PF00246; E()=1.8E-20;score=72.7;query18- 200;description=Peptidase_M14; hypothetical protein 1766316..1767044 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760064 YP_005232724.1 CDS STMMW_16761 NC_016854.1 1767019 1767984 R pfam_scan;Pfam:PF01188; E()=2.6E-15;score=56.1;query130-215;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=7.5E-28;score=96.6;query2-112;description=MR_MLE_N; putative mandelate racemase / muconate lactonizing enzyme family protein complement(1767019..1767984) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760065 YP_005232725.1 CDS STMMW_16771 NC_016854.1 1768100 1768606 D pfam_scan;Pfam:PF08534; E()=6.1E-32;score=110.0;query 20-163;description=Redoxin; thiol peroxidase 1768100..1768606 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760066 YP_005232726.1 CDS STMMW_16781 NC_016854.1 1768696 1770237 R pfam_scan;Pfam:PF00158; E()=2.9E-57;score=192.7;query 206-365;description=Sigma54_activat; transcriptional regulatory protein TyrR complement(1768696..1770237) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760067 YP_005232727.1 CDS STMMW_16791 NC_016854.1 1770385 1771446 R pfam_scan;Pfam:PF05128; E()=1.5E-59;score=199.6;query 183-341;description=DUF697; tmhmm; query 1-354; hypothetical protein complement(1770385..1771446) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760068 YP_005232728.1 CDS STMMW_16801 NC_016854.1 1771443 1772846 R pfam_scan;Pfam:PF04317; E()=6.8E-192;score=637.5;query 22-466;description=DUF463; putative ATP-binding protein complement(1771443..1772846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760069 YP_005232729.1 CDS STMMW_16811 NC_016854.1 1772989 1773303 R pfam_scan;Pfam:PF00581; E()=1.3E-14;score=53.7;query24-93;description=Rhodanese; tmhmm; query 1-105; phage shock protein E complement(1772989..1773303) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760070 YP_005232730.1 CDS STMMW_16821 NC_016854.1 1773379 1773597 R pfam_scan;Pfam:PF09584; E()=1.9E-31;score=106.7;query 10-71;description=Phageshock_PspD; phage shock protein D complement(1773379..1773597) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760071 YP_005232731.1 CDS STMMW_16831 NC_016854.1 1773620 1773979 R pfam_scan;Pfam:PF04024; E()=1.7E-18;score=65.6;query7-68;description=PspC; tmhmm; query 1-120; phage shock protein C complement(1773620..1773979) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760072 YP_005232732.1 CDS STMMW_16841 NC_016854.1 1773979 1774203 R pfam_scan;Pfam:PF06667; E()=2.7E-29;score=100.3;query 1-74;description=PspB; tmhmm; query 1-75; phage shock protein B complement(1773979..1774203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760073 YP_005232733.1 CDS STMMW_16851 NC_016854.1 1774263 1774931 R pfam_scan;Pfam:PF04012; E()=9.2E-50;score=168.6;query 2-217;description=PspA_IM30; phage shock protein A complement(1774263..1774931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760074 YP_005232734.1 CDS STMMW_16861 NC_016854.1 1775102 1776082 D pfam_scan;Pfam:PF00158; E()=8.0E-63;score=210.8;query 9-170;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=8.8E-5;score=21.8;query 288-323;description=HTH_8; psp operon transcriptional activator PspF 1775102..1776082 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760075 YP_005232735.1 CDS STMMW_16871 NC_016854.1 1776194 1777843 D pfam_scan;Pfam:PF00496; E()=2.6E-85;score=286.3;query 81-459;description=SBP_bac_5; peptide transport periplasmic protein SapA 1776194..1777843 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760076 YP_005232736.1 CDS STMMW_16881 NC_016854.1 1778011 1778805 D pfam_scan;Pfam:PF00528; E()=5.2E-42;score=143.0;query 35-254;description=BPD_transp_1; tmhmm; query 1-265; peptide transport system permease SapB 1778011..1778805 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760077 YP_005232737.1 CDS STMMW_16891 NC_016854.1 1778792 1779682 D pfam_scan;Pfam:PF00528; E()=1.5E-21;score=76.4;query113- 292;description=BPD_transp_1; tmhmm; query 1-297; peptide transport system permease SapC 1778792..1779682 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760078 YP_005232738.1 CDS STMMW_16901 NC_016854.1 1779682 1780674 D pfam_scan;Pfam:PF00005; E()=1.2E-46;score=159.0;query 33-220;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=8.5E-18;score=63.2;query238-305;description=oligo_HPY; peptide transport system ATP-binding protein SapD 1779682..1780674 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760079 YP_005232739.1 CDS STMMW_16911 NC_016854.1 1780676 1781482 D pfam_scan;Pfam:PF00005; E()=1.1E-44;score=152.6;query 41-212;description=ABC_tran; peptide transport system ATP-binding protein SapF 1780676..1781482 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760080 YP_005232740.1 CDS STMMW_16921 NC_016854.1 1781498 1782205 R pfam_scan;Pfam:PF00563; E()=2.0E-10;score=40.1;query4-211;description=EAL; hypothetical protein complement(1781498..1782205) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760081 YP_005232741.1 CDS STMMW_16931 NC_016854.1 1782672 1784045 R hypothetical protein complement(1782672..1784045) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760082 YP_005232742.1 CDS STMMW_16941 NC_016854.1 1784080 1784259 D hypothetical protein 1784080..1784259 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760083 YP_005232743.1 CDS STMMW_16951 NC_016854.1 1784234 1784533 D hypothetical protein 1784234..1784533 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760084 YP_005232744.1 CDS STMMW_16961 NC_016854.1 1784651 1785439 D pfam_scan;Pfam:PF00106; E()=4.8E-6;score=26.2;query 9-175;description=adh_short; enoyl-ACP reductase 1784651..1785439 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760085 YP_005232745.1 CDS STMMW_16971 NC_016854.1 1785639 1786772 D hypothetical protein 1785639..1786772 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760086 YP_005232746.1 CDS STMMW_16981 NC_016854.1 1786861 1788795 D pfam_scan;Pfam:PF00773; E()=2.4E-96;score=322.4;query 189-516;description=RNB; pfam_scan;Pfam:PF00575; E()=2.7E-6;score=27.1;query 561-639;description=S1; pfam_scan;Pfam:PF08206; E()=2.6E-17;score=61.7;query24-80;description=OB_RNB; Ribonuclease II; exoribonuclease II; RNase II 1786861..1788795 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760087 YP_005232747.1 CDS STMMW_16991 NC_016854.1 1789057 1791039 D pfam_scan;Pfam:PF00989; E()=1.0E-5;score=25.3;query 111-209;description=PAS; pfam_scan;Pfam:PF00563; E()=1.4E-64;score=217.5;query 409-641;description=EAL; pfam_scan;Pfam:PF00990; E()=1.6E-46;score=157.5;query 234-388;description=GGDEF; hypothetical protein 1789057..1791039 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760088 YP_005232748.1 CDS STMMW_17001 NC_016854.1 1791427 1792179 D pfam_scan;Pfam:PF00455; E()=2.2E-34;score=118.0;query 72-225;description=DeoR; pfam_scan;Pfam:PF08220; E()=8.9E-16;score=56.6;query4-59;description=HTH_DeoR; putative regulatory protein 1791427..1792179 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760089 YP_005232749.1 CDS STMMW_17011 NC_016854.1 1792776 1793102 R pfam_scan;Pfam:PF01253; E()=4.2E-26;score=90.1;query27-104;description=SUI1; putative translation initiaiton factor complement(1792776..1793102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760090 YP_005232750.1 CDS STMMW_17021 NC_016854.1 1793102 1793839 R pfam_scan;Pfam:PF00215; E()=1.9E-66;score=223.2;query 16-237;description=OMPdecase; OMPDCase; orotidine 5'-phosphate decarboxylase; orotidine-5'-P decarboxylase; OMP decarboxylase complement(1793102..1793839) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760091 YP_005232751.1 CDS STMMW_17031 NC_016854.1 1794030 1795145 R hypothetical protein complement(1794030..1795145) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760092 YP_005232752.1 CDS STMMW_17041 NC_016854.1 1795206 1795514 R pfam_scan;Pfam:PF06305; E()=6.8E-29;score=99.1;query10-87;description=DUF1049; tmhmm; query 1-103; hypothetical protein complement(1795206..1795514) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760093 YP_005232753.1 CDS STMMW_17051 NC_016854.1 1795664 1796428 R pfam_scan;Pfam:PF01569; E()=6.0E-26;score=90.3;query80-232;description=PAP2; tmhmm; query 1-255; phosphatidylglycerophosphatase B complement(1795664..1796428) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760094 YP_005232754.1 CDS STMMW_17061 NC_016854.1 1796624 1797214 D pfam_scan;Pfam:PF00925; E()=9.9E-68;score=226.3;query 4-171;description=GTP_cyclohydro2; GTP cyclohydrolase II 1796624..1797214 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760095 YP_005232755.1 CDS STMMW_17071 NC_016854.1 1797270 1799945 R pfam_scan;Pfam:PF00694; E()=2.3E-48;score=163.0;query 690-818;description=Aconitase_C; pfam_scan;Pfam:PF00330; E()=6.4E-163;score=542.2;query 58-562;description=Aconitase; aconitate hydratase 1 complement(1797270..1799945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760096 YP_005232756.1 CDS STMMW_17081 NC_016854.1 1800922 1801896 R pfam_scan;Pfam:PF00126; E()=8.4E-15;score=54.1;query3-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.1E-43;score=148.4;query 92-293;description=LysR_substrate; cys regulon transcriptional activator complement(1800922..1801896) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760097 YP_005232757.1 CDS STMMW_17101 NC_016854.1 1802307 1804904 R pfam_scan;Pfam:PF01396; E()=1.1E-5;score=24.0;query 598-622;description=zf-C4_Topoisom; pfam_scan;Pfam:PF01751; E()=7.4E-23;score=79.9;query3-140;description=Toprim; pfam_scan;Pfam:PF08272; E()=6.2E-13;score=47.5;query758- 797;description=Topo_Zn_Ribbon; pfam_scan;Pfam:PF01131; E()=4.6E-128;score=427.1;query 157-565;description=Topoisom_bac; DNA topoisomerase I, omega protein I complement(1802307..1804904) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760098 YP_005232758.1 CDS STMMW_17111 NC_016854.1 1805307 1805558 D pfam_scan;Pfam:PF10692; E()=2.7E-42;score=141.4;query 3-83;description=DUF2498; hypothetical protein 1805307..1805558 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760099 YP_005232759.1 CDS STMMW_17121 NC_016854.1 1805600 1806646 R pfam_scan;Pfam:PF08496; E()=6.4E-62;score=207.7;query 2-157;description=Peptidase_S49_N; pfam_scan;Pfam:PF01343; E()=1.8E-47;score=160.4;query 160-308;description=Peptidase_S49; tmhmm; query 1-349; putative protease complement(1805600..1806646) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760100 YP_005232760.1 CDS STMMW_17131 NC_016854.1 1806884 1807645 D pfam_scan;Pfam:PF00106; E()=1.5E-27;score=96.2;query14-182;description=adh_short; oxidoreductase 1806884..1807645 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760101 YP_005232761.1 CDS STMMW_17141 NC_016854.1 1807642 1808232 D pfam_scan;Pfam:PF02572; E()=9.9E-73;score=243.0;query 26-196;description=CobA_CobO_BtuR; COB(I) alamin adenosyltransferase 1807642..1808232 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760102 YP_005232762.1 CDS STMMW_17151 NC_016854.1 1808319 1809194 R pfam_scan;Pfam:PF01479; E()=1.3E-8;score=33.9;query 4-43;description=S4; pfam_scan;Pfam:PF00849; E()=1.0E-20;score=74.1;query69- 200;description=PseudoU_synth_2; putative pseudouridine synthase complement(1808319..1809194) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760103 YP_005232763.1 CDS STMMW_17161 NC_016854.1 1809295 1809915 R pfam_scan;Pfam:PF01300; E()=8.1E-50;score=168.4;query 23-198;description=Sua5_yciO_yrdC; hypothetical protein complement(1809295..1809915) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760104 YP_005232764.1 CDS STMMW_17171 NC_016854.1 1809923 1810804 R pfam_scan;Pfam:PF02811; E()=6.8E-33;score=114.1;query 14-263;description=PHP; hypothetical protein complement(1809923..1810804) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760105 YP_005232765.1 CDS STMMW_17181 NC_016854.1 1811065 1812627 D pfam_scan;Pfam:PF04715; E()=9.2E-15;score=54.2;query19- 192;description=Anth_synt_I_N; pfam_scan;Pfam:PF00425; E()=9.4E-77;score=257.0;query 242-502;description=Chorismate_bind; anthranilate synthase component I 1811065..1812627 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760106 YP_005232766.1 CDS STMMW_17191 NC_016854.1 1812627 1814222 D pfam_scan;Pfam:PF00591; E()=1.1E-106;score=355.3;query 272-521;description=Glycos_transf_3; pfam_scan;Pfam:PF02885; E()=1.4E-18;score=65.7;query200- 263;description=Glycos_trans_3N; pfam_scan;Pfam:PF00117; E()=1.4E-52;score=177.5;query 5-187;description=GATase; anthranilate synthase component II; anthranilate phosphoribosyltransferase 1812627..1814222 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760107 YP_005232767.1 CDS STMMW_17201 NC_016854.1 1814226 1815584 D pfam_scan;Pfam:PF00218; E()=1.3E-97;score=325.7;query 4-251;description=IGPS; pfam_scan;Pfam:PF00697; E()=7.6E-65;score=217.6;query 257-447;description=PRAI; indole-3-glycerol phosphate synthase; IGPS 1814226..1815584 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760108 YP_005232768.1 CDS STMMW_17211 NC_016854.1 1815594 1816787 D pfam_scan;Pfam:PF00291; E()=2.0E-41;score=142.3;query 54-377;description=PALP; tryptophan synthase beta chain 1815594..1816787 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760109 YP_005232769.1 CDS STMMW_17221 NC_016854.1 1816787 1817593 D pfam_scan;Pfam:PF00290; E()=1.3E-98;score=328.5;query 8-266;description=Trp_syntA; tryptophan synthase alpha chain 1816787..1817593 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760110 YP_005232770.1 CDS STMMW_17231 NC_016854.1 1818073 1818255 D pfam_scan;Pfam:PF10685; E()=1.0E-8;score=34.4;query 10-31;description=KGG; hypothetical protein 1818073..1818255 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760111 YP_005232771.1 CDS STMMW_17241 NC_016854.1 1818345 1818848 D pfam_scan;Pfam:PF05974; E()=1.6E-61;score=206.2;query 5-162;description=DUF892; hypothetical protein 1818345..1818848 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760112 YP_005232772.1 CDS STMMW_17251 NC_016854.1 1818922 1819428 D pfam_scan;Pfam:PF05974; E()=6.7E-45;score=152.2;query 4-156;description=DUF892; hypothetical protein 1818922..1819428 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760113 YP_005232773.1 CDS STMMW_17261 NC_016854.1 1819448 1820326 D pfam_scan;Pfam:PF05067; E()=4.7E-85;score=284.8;query 1-277;description=Mn_catalase; hypothetical protein 1819448..1820326 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760114 YP_005232774.1 CDS STMMW_17271 NC_016854.1 1820408 1821046 R pfam_scan;Pfam:PF03922; E()=1.5E-74;score=249.3;query 23-212;description=OmpW; putative outer membrane protein complement(1820408..1821046) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760115 YP_005232775.1 CDS STMMW_17281 NC_016854.1 1821384 1821788 D pfam_scan;Pfam:PF03692; E()=7.8E-9;score=35.1;query 7-97;description=UPF0153; hypothetical protein 1821384..1821788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760116 YP_005232776.1 CDS STMMW_17291 NC_016854.1 1821814 1822557 D pfam_scan;Pfam:PF06790; E()=4.1E-99;score=330.4;query 1-246;description=UPF0259; tmhmm; query 1-248; hypothetical protein 1821814..1822557 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760117 YP_005232777.1 CDS STMMW_17301 NC_016854.1 1822614 1823153 D pfam_scan;Pfam:PF04279; E()=1.0E-74;score=249.5;query 1-175;description=IspA; tmhmm; query 1-180; putative intracellular septation protein; intracellular septation protein 1822614..1823153 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760118 YP_005232778.1 CDS STMMW_17311 NC_016854.1 1823314 1823715 D pfam_scan;Pfam:PF03061; E()=3.7E-19;score=67.6;query26-98;description=4HBT; putative Acyl-CoA hydrolase 1823314..1823715 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760119 YP_005232779.1 CDS STMMW_17321 NC_016854.1 1823775 1824503 R pfam_scan;Pfam:PF03544; E()=6.9E-18;score=64.0;query163-231;description=TonB; TonB protein complement(1823775..1824503) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760120 YP_005232780.1 CDS STMMW_17331 NC_016854.1 1824727 1825023 D pfam_scan;Pfam:PF03795; E()=6.1E-27;score=93.7;query2-94;description=YCII; hypothetical protein 1824727..1825023 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760121 YP_005232781.1 CDS STMMW_17341 NC_016854.1 1825383 1826843 D pfam_scan;Pfam:PF00614; E()=6.4E-8;score=31.6;query 219-246;description=PLDc; tmhmm; query 1-487; cardiolipin synthase; cardiolipin synthetase; CL synthase 1825383..1826843 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760122 YP_005232782.1 CDS STMMW_17351 NC_016854.1 1826877 1827206 D pfam_scan;Pfam:PF04269; E()=5.5E-46;score=154.2;query 7-109;description=DUF440; hypothetical protein 1826877..1827206 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760123 YP_005232783.1 CDS STMMW_17361 NC_016854.1 1827254 1828036 R pfam_scan;Pfam:PF00520; E()=5.9E-26;score=90.6;query46-219;description=Ion_trans; tmhmm; query 1-261; ion transport protein complement(1827254..1828036) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760124 YP_005232784.1 CDS STMMW_17371 NC_016854.1 1828138 1829142 R pfam_scan;Pfam:PF00005; E()=3.1E-47;score=160.9;query 50-225;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=3.0E-20;score=71.0;query244-311;description=oligo_HPY; oligopeptide transport ATP-binding protein (OppF) complement(1828138..1829142) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760125 YP_005232785.1 CDS STMMW_17381 NC_016854.1 1829139 1830146 R pfam_scan;Pfam:PF00005; E()=1.4E-48;score=165.3;query 47-228;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=3.5E-22;score=77.2;query246-310;description=oligo_HPY; oligopeptide transport ATP-binding protein (OppD) complement(1829139..1830146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760126 YP_005232786.1 CDS STMMW_17391 NC_016854.1 1830158 1831066 R pfam_scan;Pfam:PF00528; E()=1.4E-28;score=99.2;query119- 300;description=BPD_transp_1; tmhmm; query 1-303; oligopeptide transport system permease protein (OppC) complement(1830158..1831066) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760127 YP_005232787.1 CDS STMMW_17401 NC_016854.1 1831081 1832001 R pfam_scan;Pfam:PF00528; E()=1.5E-41;score=141.4;query 112-305;description=BPD_transp_1; tmhmm; query 1-307; oligopeptide transport system permease protein (OppB) complement(1831081..1832001) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760128 YP_005232788.1 CDS STMMW_17411 NC_016854.1 1832123 1833871 R pfam_scan;Pfam:PF00496; E()=2.5E-93;score=312.6;query 121-502;description=SBP_bac_5; tmhmm; query 1-583; periplasmic oligopeptide-binding protein precursor (OppA) complement(1832123..1833871) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760129 YP_005232789.1 CDS STMMW_17421 NC_016854.1 1833822 1834136 D hypothetical protein 1833822..1834136 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760130 YP_005232790.1 CDS STMMW_17431 NC_016854.1 1834519 1835166 R pfam_scan;Pfam:PF01914; E()=5.0E-74;score=247.7;query 9-210;description=MarC; tmhmm; query 1-216; hypothetical protein complement(1834519..1835166) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760131 YP_005232791.1 CDS STMMW_17441 NC_016854.1 1835643 1838321 D pfam_scan;Pfam:PF00171; E()=1.7E-27;score=95.4;query5-399;description=Aldedh; pfam_scan;Pfam:PF00465; E()=1.3E-113;score=379.1;query 457-849;description=Fe-ADH; alcohol dehydrogenase 1835643..1838321 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760132 YP_005232792.1 CDS STMMW_17451 NC_016854.1 1838518 1839135 R pfam_scan;Pfam:PF00265; E()=5.8E-60;score=201.1;query 2-186;description=TK; thymidine kinase complement(1838518..1839135) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760133 YP_005232793.1 CDS STMMW_17461 NC_016854.1 1839798 1840211 D pfam_scan;Pfam:PF00816; E()=1.4E-19;score=69.8;query25- 127;description=Histone_HNS; DNA-binding protein (histone-like protein Hlp-II) 1839798..1840211 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760134 YP_005232794.1 CDS STMMW_17471 NC_016854.1 1840343 1841251 R pfam_scan;Pfam:PF00483; E()=1.5E-27;score=96.2;query10- 275;description=NTP_transferase; glucose-1-phosphate uridylyltransferase complement(1840343..1841251) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760135 YP_005232795.1 CDS STMMW_17481 NC_016854.1 1841454 1842467 R pfam_scan;Pfam:PF00072; E()=1.5E-29;score=101.9;query 10-120;description=Response_reg; putative regulatory protein complement(1841454..1842467) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760136 YP_005232796.1 CDS STMMW_17491 NC_016854.1 1842558 1843463 R pfam_scan;Pfam:PF01734; E()=3.2E-35;score=121.6;query 8-165;description=Patatin; hypothetical protein complement(1842558..1843463) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760137 YP_005232797.1 CDS STMMW_17501 NC_016854.1 1843574 1844032 D pfam_scan;Pfam:PF02810; E()=4.1E-7;score=28.2;query 3-20;description=SEC-C; hypothetical protein 1843574..1844032 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760138 YP_005232798.1 CDS STMMW_17511 NC_016854.1 1844083 1844925 D pfam_scan;Pfam:PF00551; E()=1.2E-55;score=187.7;query 86-262;description=Formyl_trans_N; pfam_scan;Pfam:PF01842; E()=1.8E-7;score=30.8;query 8-69;description=ACT; formyltetrahydrofolate deformylase 1844083..1844925 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760139 YP_005232799.1 CDS STMMW_17521 NC_016854.1 1846241 1847716 R pfam_scan;Pfam:PF08238; E()=1.0E-9;score=37.7;query 34-68;description=Sel1; hypothetical protein complement(1846241..1847716) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760140 YP_005232800.1 CDS STMMW_17531 NC_016854.1 1848012 1848689 R pfam_scan;Pfam:PF02665; E()=4.0E-90;score=300.5;query 4-224;description=Nitrate_red_gam; tmhmm; query 1-226; respiratory nitrate reductase 1 subunit gamma complement(1848012..1848689) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760141 YP_005232801.1 CDS STMMW_17541 NC_016854.1 1848689 1849399 R pfam_scan;Pfam:PF02613; E()=2.9E-28;score=98.0;query8- 161;description=Nitrate_red_del; respiratory nitrate reductase 1 subunit delta complement(1848689..1849399) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760142 YP_005232802.1 CDS STMMW_17551 NC_016854.1 1849396 1850931 R respiratory nitrate reductase 1 subunit beta complement(1849396..1850931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760143 YP_005232803.1 CDS STMMW_17561 NC_016854.1 1850928 1854671 R pfam_scan;Pfam:PF00384; E()=2.8E-67;score=227.0;query 108-833;description=Molybdopterin; pfam_scan;Pfam:PF01568; E()=2.2E-20;score=71.9;query1087- 1202;description=Molydop_binding; respiratory nitrate reductase 1 subunit alpha complement(1850928..1854671) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760144 YP_005232804.1 CDS STMMW_17571 NC_016854.1 1855059 1856456 R pfam_scan;Pfam:PF07690; E()=3.9E-15;score=55.6;query45-422;description=MFS_1; tmhmm; query 1-466; nitrite extrusion protein (nitrite facilitator) complement(1855059..1856456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760145 YP_005232805.1 CDS STMMW_17581 NC_016854.1 1856797 1858593 D pfam_scan;Pfam:PF00672; E()=1.6E-11;score=43.5;query159-224;description=HAMP; pfam_scan;Pfam:PF02518; E()=6.4E-17;score=60.9;query496-583;description=HATPase_c; pfam_scan;Pfam:PF07730; E()=1.4E-16;score=60.1;query390-453;description=HisKA_3; tmhmm; query 1-599; nitrate/nitrite sensor protein NarX 1856797..1858593 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760146 YP_005232806.1 CDS STMMW_17591 NC_016854.1 1858586 1859236 D pfam_scan;Pfam:PF00196; E()=1.3E-21;score=75.3;query155-209;description=GerE; pfam_scan;Pfam:PF00072; E()=3.4E-31;score=107.2;query 9-120;description=Response_reg; nitrate/nitrite response regulator protein NarL 1858586..1859236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760147 YP_005232807.1 CDS STMMW_17601 NC_016854.1 1859237 1860661 R Signal peptide; signalp; query 1-41;cleavage_site_probability=0.839; 0.990; putative invasin complement(1859237..1860661) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760148 YP_005232808.1 CDS STMMW_17611 NC_016854.1 1860838 1861191 D pfam_scan;Pfam:PF02635; E()=1.2E-22;score=79.6;query3-117;description=DrsE; hypothetical protein 1860838..1861191 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760149 YP_005232809.1 CDS STMMW_17621 NC_016854.1 1861271 1861501 R pfam_scan;Pfam:PF06150; E()=3.1E-24;score=83.9;query9-76;description=ChaB; cation transport regulator ChaB complement(1861271..1861501) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760150 YP_005232810.1 CDS STMMW_17631 NC_016854.1 1861768 1862868 D pfam_scan;Pfam:PF01699; E()=1.8E-11;score=43.9;query233-363;description=Na_Ca_ex; tmhmm; query 1-367; putative calcium/proton antiporter 1861768..1862868 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760151 YP_005232811.1 CDS STMMW_17641 NC_016854.1 1862922 1863776 R pfam_scan;Pfam:PF00793; E()=7.3E-80;score=267.1;query 10-275;description=DAHP_synth_1; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO 8-P synthase; KDO-8-phosphate synthetase; KDOPS; Phospho-2-dehydro-3-deoxyoctonate aldolase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(1862922..1863776) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760152 YP_005232812.1 CDS STMMW_17651 NC_016854.1 1863814 1864623 R putative regulator complement(1863814..1864623) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760153 YP_005232813.1 CDS STMMW_17661 NC_016854.1 1864627 1865016 R pfam_scan;Pfam:PF04247; E()=1.1E-41;score=141.0;query 4-128;description=SirB; tmhmm; query 1-130; putative regulator complement(1864627..1865016) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760154 YP_005232814.1 CDS STMMW_17671 NC_016854.1 1865013 1865846 R pfam_scan;Pfam:PF05175; E()=8.6E-19;score=67.2;query106-236;description=MTS; HemK protein, putative protoporphyrinogen oxidase complement(1865013..1865846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760155 YP_005232815.1 CDS STMMW_17681 NC_016854.1 1865846 1866928 R pfam_scan;Pfam:PF00472; E()=7.3E-42;score=141.5;query 215-321;description=RF-1; pfam_scan;Pfam:PF03462; E()=5.9E-45;score=151.4;query 66-178;description=PCRF; peptide chain release factor 1; peptide chain release factor 1 (RF-1); RF-1 complement(1865846..1866928) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760156 YP_005232816.1 CDS STMMW_17691 NC_016854.1 1866969 1868225 R pfam_scan;Pfam:PF01488; E()=7.0E-46;score=154.8;query 162-306;description=Shikimate_DH; pfam_scan;Pfam:PF05201; E()=5.3E-58;score=194.7;query 6-156;description=GlutR_N; pfam_scan;Pfam:PF00745; E()=1.5E-29;score=101.4;query 320-418;description=GlutR_dimer; glutamyl-tRNA reductase; GluTR complement(1866969..1868225) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760157 YP_005232817.1 CDS STMMW_17701 NC_016854.1 1868539 1869162 D pfam_scan;Pfam:PF03550; E()=2.3E-58;score=196.3;query 49-204;description=LolB; outer membrane lipoprotein 1868539..1869162 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760158 YP_005232818.1 CDS STMMW_17711 NC_016854.1 1869159 1870010 D pfam_scan;Pfam:PF08544; E()=3.4E-8;score=33.2;query 206-264;description=GHMP_kinases_C; pfam_scan;Pfam:PF00288; E()=4.2E-15;score=54.9;query91- 148;description=GHMP_kinases_N; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1869159..1870010 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760159 YP_005232819.1 CDS STMMW_17721 NC_016854.1 1870276 1871223 D pfam_scan;Pfam:PF00156; E()=5.2E-17;score=61.4;query160- 245;description=Pribosyltran; ribose-phosphate pyrophosphokinase 1870276..1871223 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760160 YP_005232820.1 CDS STMMW_17731 NC_016854.1 1871372 1873033 D pfam_scan;Pfam:PF01740; E()=3.3E-16;score=58.3;query444-547;description=STAS; pfam_scan;Pfam:PF00916; E()=1.8E-76;score=256.9;query 111-434;description=Sulfate_transp; tmhmm; query 1-554; putative sulfate transporter 1871372..1873033 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760161 YP_005232821.1 CDS STMMW_17741 NC_016854.1 1873078 1873356 R pfam_scan;Pfam:PF10762; E()=2.2E-48;score=161.5;query 1-89;description=DUF2583; tmhmm; query 1-93; hypothetical protein complement(1873078..1873356) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760162 YP_005232822.1 CDS STMMW_17751 NC_016854.1 1873608 1874216 D pfam_scan;Pfam:PF01195; E()=2.6E-65;score=218.8;query 13-196;description=Pept_tRNA_hydro; peptidyl-tRNA hydrolase; PTH 1873608..1874216 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760163 YP_005232823.1 CDS STMMW_17761 NC_016854.1 1874333 1875424 D pfam_scan;Pfam:PF01926; E()=2.4E-23;score=82.1;query4-111;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=2.0E-8;score=33.6;query 5-45;description=FeoB_N; pfam_scan;Pfam:PF06071; E()=6.2E-40;score=134.7;query 279-362;description=YchF-GTPase_C; putative ATP/GTP-binding protein 1874333..1875424 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760164 YP_005232824.1 CDS STMMW_17771 NC_016854.1 1875583 1876848 R pfam_scan;Pfam:PF10899; E()=1.3E-5;score=24.4;query 77-135;description=DUF2743; hypothetical protein complement(1875583..1876848) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760165 YP_005232825.1 CDS STMMW_17781 NC_016854.1 1877343 1878461 D pfam_scan;Pfam:PF01058; E()=4.6E-26;score=90.6;query62- 207;description=Oxidored_q6; tmhmm; query 1-373; hydrogenase-1 small subunit 1877343..1878461 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760166 YP_005232826.1 CDS STMMW_17791 NC_016854.1 1878458 1880251 D pfam_scan;Pfam:PF00374; E()=8.3E-241;score=799.6;query 54-582;description=NiFeSe_Hases; hydrogenase-1 large chain (nifE hydrogenase) 1878458..1880251 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760167 YP_005232827.1 CDS STMMW_17801 NC_016854.1 1880270 1881001 D pfam_scan;Pfam:PF00033; E()=7.0E-38;score=129.6;query 20-228;description=Cytochrom_B_N; tmhmm; query 1-244; Ni/Fe-hydrogenase 1 b-type cytochrome subunit 1880270..1881001 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760168 YP_005232828.1 CDS STMMW_17811 NC_016854.1 1880998 1881594 D pfam_scan;Pfam:PF01750; E()=6.6E-38;score=128.8;query 23-151;description=HycI; hydrogenase-1 operon protein HyaD 1880998..1881594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760169 YP_005232829.1 CDS STMMW_17821 NC_016854.1 1881584 1881988 D pfam_scan;Pfam:PF07449; E()=5.0E-40;score=135.5;query 10-116;description=HyaE; hydrogenase-1 operon protein HyaE 1881584..1881988 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760170 YP_005232830.1 CDS STMMW_17831 NC_016854.1 1881985 1882833 D pfam_scan;Pfam:PF04809; E()=1.6E-7;score=30.7;query 50-149;description=HupH_C; hydrogenase-1 operon protein HyaF 1881985..1882833 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760171 YP_005232831.1 CDS STMMW_17841 NC_016854.1 1882908 1884452 D pfam_scan;Pfam:PF01654; E()=1.6E-179;score=596.6;query 7-502;description=Bac_Ubq_Cox; tmhmm; query 1-515; cytochrome bd-II oxidase subunit I (pseudogene) 1882908..1884452 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760172 YP_005232832.1 CDS STMMW_17851 NC_016854.1 1884464 1885600 D pfam_scan;Pfam:PF02322; E()=1.2E-113;score=379.4;query 6-361;description=Cyto_ox_2; tmhmm; query 1-379; cytochrome oxidase subunit II 1884464..1885600 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760173 YP_005232833.1 CDS STMMW_17871 NC_016854.1 1886046 1887371 D pfam_scan;Pfam:PF02812; E()=6.6E-56;score=187.3;query 59-187;description=ELFV_dehydrog_N; pfam_scan;Pfam:PF00208; E()=7.7E-80;score=267.3;query 205-437;description=ELFV_dehydrog; glutamate dehydrogenase 1886046..1887371 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760174 YP_005232834.1 CDS STMMW_17881 NC_016854.1 1887585 1889297 D pfam_scan;Pfam:PF01204; E()=8.9E-172;score=572.0;query 62-539;description=Trehalase; Alpha,alpha-trehalose glucohydrolase; Periplasmic trehalase precursor; Alpha,alpha-trehalase 1887585..1889297 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760175 YP_005232835.1 CDS STMMW_17891 NC_016854.1 1889360 1889614 R pfam_scan;Pfam:PF04226; E()=7.8E-14;score=51.2;query33- 83;description=Transgly_assoc; hypothetical protein complement(1889360..1889614) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760176 YP_005232836.1 CDS STMMW_17901 NC_016854.1 1889783 1890517 D pfam_scan;Pfam:PF07317; E()=1.5E-41;score=140.2;query 7-111;description=YcgR; pfam_scan;Pfam:PF07238; E()=1.9E-9;score=36.7;query 112-229;description=PilZ; hypothetical protein 1889783..1890517 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760177 YP_005232837.1 CDS STMMW_17911 NC_016854.1 1890531 1891142 R pfam_scan;Pfam:PF01464; E()=5.5E-26;score=90.0;query43-168;description=SLT; membrane-bound lytic murein transglycosylase E complement(1890531..1891142) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760178 YP_005232838.1 CDS STMMW_17921 NC_016854.1 1891313 1892227 D pfam_scan;Pfam:PF02016; E()=1.5E-77;score=259.7;query 5-285;description=Peptidase_S66; hypothetical protein 1891313..1892227 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760179 YP_005232839.1 CDS STMMW_17931 NC_016854.1 1892324 1894057 D pfam_scan;Pfam:PF00999; E()=1.6E-56;score=191.7;query 15-380;description=Na_H_Exchanger; pfam_scan;Pfam:PF03471; E()=3.8E-9;score=35.8;query 494-571;description=CorC_HlyC; pfam_scan;Pfam:PF02080; E()=1.7E-12;score=46.7;query419-483;description=TrkA_C; tmhmm; query 1-578; putative Na+/H+ exchanger; cell volume regulation protein A 1892324..1894057 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760180 YP_005232840.1 CDS STMMW_17941 NC_016854.1 1894120 1895190 R pfam_scan;Pfam:PF00842; E()=2.0E-40;score=137.3;query 232-354;description=Ala_racemase_C; pfam_scan;Pfam:PF01168; E()=4.3E-60;score=202.8;query 10-217;description=Ala_racemase_N; alanine racemase complement(1894120..1895190) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760181 YP_005232841.1 CDS STMMW_17951 NC_016854.1 1895204 1896502 R pfam_scan;Pfam:PF01266; E()=3.1E-91;score=306.0;query 2-396;description=DAO; D-amino acid dehydrogenase small subunit; D-amino acid dehydrogenase complement(1895204..1896502) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760182 YP_005232842.1 CDS STMMW_17961 NC_016854.1 1896825 1898357 D pfam_scan;Pfam:PF04293; E()=3.2E-227;score=754.0;query 18-453;description=SpoVR; hypothetical protein 1896825..1898357 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760183 YP_005232843.1 CDS STMMW_17971 NC_016854.1 1898404 1899123 R pfam_scan;Pfam:PF00392; E()=4.9E-18;score=64.4;query12-71;description=GntR; pfam_scan;Pfam:PF07840; E()=2.2E-74;score=248.2;query 72-234;description=FadR_C; fatty acid-fatty acyl responsive DNA-binding protein; Fatty acid metabolism regulator protein complement(1898404..1899123) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760184 YP_005232844.1 CDS STMMW_17981 NC_016854.1 1899343 1900887 D pfam_scan;Pfam:PF06450; E()=2.8E-299;score=992.2;query 1-511;description=NhaB; tmhmm; query 1-515; regulator of intracellular pH; Na+/H+ antiporter 1899343..1900887 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760185 YP_005232845.1 CDS STMMW_17991 NC_016854.1 1901029 1901559 D pfam_scan;Pfam:PF02600; E()=3.8E-44;score=149.7;query 10-161;description=DsbB; tmhmm; query 1-177; disulfide bond formation protein B; Disulfide oxidoreductase 1901029..1901559 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760186 YP_005232846.1 CDS STMMW_18001 NC_016854.1 1901668 1902009 D pfam_scan;Pfam:PF09313; E()=6.4E-28;score=96.0;query14-95;description=DUF1971; hypothetical protein 1901668..1902009 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760187 YP_005232847.1 CDS STMMW_18011 NC_016854.1 1902081 1902254 R pfam_scan;Pfam:PF08178; E()=2.3E-29;score=100.3;query 1-54;description=GnsAB; hypothetical protein complement(1902081..1902254) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760188 YP_005232848.1 CDS STMMW_18021 NC_016854.1 1902446 1902583 R hypothetical protein complement(1902446..1902583) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760189 YP_005232849.1 CDS STMMW_18031 NC_016854.1 1902935 1903396 R pfam_scan;Pfam:PF03692; E()=7.8E-10;score=38.3;query29-97;description=UPF0153; hypothetical protein complement(1902935..1903396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760190 YP_005232850.1 CDS STMMW_18041 NC_016854.1 1903474 1904133 R pfam_scan;Pfam:PF01557; E()=5.1E-60;score=202.2;query 18-216;description=FAA_hydrolase; putative hydrolase complement(1903474..1904133) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760191 YP_005232851.1 CDS STMMW_18051 NC_016854.1 1904183 1904515 R pfam_scan;Pfam:PF05166; E()=1.4E-32;score=111.0;query 16-89;description=YcgL; hypothetical protein complement(1904183..1904515) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760192 YP_005232852.1 CDS STMMW_18061 NC_016854.1 1904602 1905309 D pfam_scan;Pfam:PF03775; E()=1.1E-40;score=137.6;query 129-234;description=MinC_C; pfam_scan;Pfam:PF05209; E()=1.1E-31;score=108.7;query 1-104;description=MinC_N; septum site-determining protein minC; septum site determining protein 1904602..1905309 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760193 YP_005232853.1 CDS STMMW_18071 NC_016854.1 1905333 1906145 D pfam_scan;Pfam:PF01656; E()=2.0E-28;score=99.4;query5-217;description=CbiA; septum site determining protein 1905333..1906145 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760194 YP_005232854.1 CDS STMMW_18081 NC_016854.1 1906149 1906415 D pfam_scan;Pfam:PF03776; E()=7.9E-28;score=95.5;query14-83;description=MinE; cell division topological specificity factor 1906149..1906415 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760195 YP_005232855.1 CDS STMMW_18091 NC_016854.1 1906537 1907664 R pfam_scan;Pfam:PF01612; E()=3.1E-51;score=173.0;query 3-168;description=3_5_exonuc; pfam_scan;Pfam:PF00570; E()=2.8E-13;score=49.1;query213-280;description=HRDC; Ribonuclease D complement(1906537..1907664) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760196 YP_005232856.1 CDS STMMW_18101 NC_016854.1 1908449 1910134 R pfam_scan;Pfam:PF00501; E()=2.4E-117;score=391.6;query 50-484;description=AMP-binding; long-chain-fatty-acid--CoA ligase complement(1908449..1910134) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760197 YP_005232857.1 CDS STMMW_18111 NC_016854.1 1910339 1910920 R pfam_scan;Pfam:PF03843; E()=8.6E-53;score=177.5;query 20-179;description=Slp; putative lipoprotein complement(1910339..1910920) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760198 YP_005232858.1 CDS STMMW_18121 NC_016854.1 1910992 1911687 R pfam_scan;Pfam:PF00814; E()=8.2E-29;score=100.4;query 28-149;description=Peptidase_M22; hypothetical protein complement(1910992..1911687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760199 YP_005232859.1 CDS STMMW_18131 NC_016854.1 1911745 1913655 R pfam_scan;Pfam:PF04851; E()=5.9E-6;score=25.8;query 18-81;description=ResIII; pfam_scan;Pfam:PF06733; E()=6.0E-6;score=25.7;query 182-247;description=DEAD_2; putative ATP-dependent helicase complement(1911745..1913655) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760200 YP_005232860.1 CDS STMMW_18141 NC_016854.1 1913786 1914130 D pfam_scan;Pfam:PF01042; E()=4.9E-26;score=90.5;query4-114;description=Ribonuc_L- PSP; hypothetical protein 1913786..1914130 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760201 YP_005232861.1 CDS STMMW_18151 NC_016854.1 1914136 1914315 R pfam_scan;Pfam:PF03701; E()=1.6E-26;score=90.9;query1-50;description=UPF0181; hypothetical protein complement(1914136..1914315) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760202 YP_005232862.1 CDS STMMW_18161 NC_016854.1 1914396 1915760 D pfam_scan;Pfam:PF04715; E()=1.0E-29;score=102.7;query 22-153;description=Anth_synt_I_N; pfam_scan;Pfam:PF00425; E()=2.5E-90;score=301.5;query 193-444;description=Chorismate_bind; para-aminobenzoate synthase component I 1914396..1915760 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760203 YP_005232863.1 CDS STMMW_18171 NC_016854.1 1915764 1916342 D pfam_scan;Pfam:PF00293; E()=8.7E-17;score=60.8;query31-155;description=NUDIX; hypothetical protein 1915764..1916342 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760204 YP_005232864.1 CDS STMMW_18181 NC_016854.1 1916606 1917970 D pfam_scan;Pfam:PF03313; E()=1.7E-106;score=355.1;query 184-449;description=SDH_alpha; pfam_scan;Pfam:PF03315; E()=6.1E-59;score=198.2;query 3-158;description=SDH_beta; L-serine deaminase 1 1916606..1917970 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760205 YP_005232865.1 CDS STMMW_18191 NC_016854.1 1918006 1919709 D pfam_scan;Pfam:PF00563; E()=3.1E-65;score=219.6;query 309-536;description=EAL; tmhmm; query 1-568; hypothetical protein 1918006..1919709 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760206 YP_005232866.1 CDS STMMW_18201 NC_016854.1 1919731 1921290 R pfam_scan;Pfam:PF03741; E()=3.9E-45;score=153.3;query 14-203;description=TerC; pfam_scan;Pfam:PF00571; E()=1.9E-16;score=59.9;query304-418;description=CBS; pfam_scan;Pfam:PF03471; E()=2.6E-16;score=58.6;query434-511;description=CorC_HlyC; tmhmm; query 1-520; hypothetical protein complement(1919731..1921290) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760207 YP_005232867.1 CDS STMMW_18211 NC_016854.1 1921278 1921613 R hypothetical protein complement(1921278..1921613) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760208 YP_005232868.1 CDS STMMW_18221 NC_016854.1 1921763 1922731 D pfam_scan;Pfam:PF03830; E()=1.9E-59;score=199.6;query 163-310;description=PTSIIB_sorb; pfam_scan;Pfam:PF03610; E()=1.8E-36;score=124.1;query 3-117;description=EIIA-man; PTS system, mannose-specific IIab component 1921763..1922731 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760209 YP_005232869.1 CDS STMMW_18231 NC_016854.1 1922784 1923584 D pfam_scan;Pfam:PF03609; E()=2.1E-90;score=302.1;query 1-238;description=EII-Sor; tmhmm; query 1-267; phosphotransferase enzyme II, C component 1922784..1923584 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760210 YP_005232870.1 CDS STMMW_18241 NC_016854.1 1923588 1924448 D pfam_scan;Pfam:PF03613; E()=6.8E-117;score=388.9;query 14-284;description=EIID-AGA; tmhmm; query 1-287; phosphotransferase enzyme II, D component 1923588..1924448 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760211 YP_005232871.1 CDS STMMW_18251 NC_016854.1 1924506 1924964 D pfam_scan;Pfam:PF06173; E()=1.0E-65;score=219.6;query 4-152;description=DUF986; tmhmm; query 1-153; hypothetical protein 1924506..1924964 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760212 YP_005232872.1 CDS STMMW_18261 NC_016854.1 1925374 1925940 D pfam_scan;Pfam:PF02659; E()=7.6E-20;score=70.5;query13-81;description=DUF204; tmhmm; query 1-189; hypothetical protein 1925374..1925940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760213 YP_005232873.1 CDS STMMW_18271 NC_016854.1 1925937 1926746 R pfam_scan;Pfam:PF08241; E()=2.9E-15;score=55.9;query90- 175;description=Methyltransf_11; rRNA guanine-N1-methyltransferase complement(1925937..1926746) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760214 YP_005232874.1 CDS STMMW_18281 NC_016854.1 1926812 1928557 R pfam_scan;Pfam:PF00905; E()=2.0E-82;score=276.1;query 253-547;description=Transpeptidase; pfam_scan;Pfam:PF03717; E()=2.0E-38;score=131.7;query 60-213;description=PBP_dimer; tmhmm; query 1-582; penicillin-binding protein complement(1926812..1928557) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760855 YP_005232875.1 CDS STMMW_18291 NC_016854.1 1928777 1928986 R pfam_scan;Pfam:PF00313; E()=3.7E-33;score=112.5;query 4-68;description=CSD; cold shock-like protein CspC complement(1928777..1928986) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760856 YP_005232876.1 CDS STMMW_18301 NC_016854.1 1930450 1930689 D tmhmm; query 1-80; hypothetical protein 1930450..1930689 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760857 YP_005232877.1 CDS STMMW_18311 NC_016854.1 1930901 1931692 R pfam_scan;Pfam:PF01614; E()=1.5E-47;score=160.4;query 129-254;description=IclR; pfam_scan;Pfam:PF09339; E()=9.2E-14;score=50.6;query15-64;description=HTH_IclR; transcriptional regulator KdgR complement(1930901..1931692) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760858 YP_005232878.1 CDS STMMW_18321 NC_016854.1 1931868 1933241 D pfam_scan;Pfam:PF07690; E()=8.0E-53;score=179.6;query 22-412;description=MFS_1; tmhmm; query 1-458; putative membrane transport protein 1931868..1933241 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760859 YP_005232879.1 CDS STMMW_18331 NC_016854.1 1933289 1934170 R pfam_scan;Pfam:PF01435; E()=7.4E-37;score=126.2;query 86-288;description=Peptidase_M48; pfam_scan;Pfam:PF06509; E()=8.3E-33;score=112.0;query 1-77;description=HtpX_N; tmhmm; query 1-294; protease HtpX; heat shock protein complement(1933289..1934170) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760860 YP_005232880.1 CDS STMMW_18341 NC_016854.1 1934364 1936412 R pfam_scan;Pfam:PF03572; E()=2.8E-51;score=172.9;query 356-529;description=Peptidase_S41; pfam_scan;Pfam:PF00595; E()=2.3E-11;score=42.8;query240-319;description=PDZ; tail-specific protease complement(1934364..1936412) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760861 YP_005232881.1 CDS STMMW_18351 NC_016854.1 1936432 1937118 R pfam_scan;Pfam:PF04352; E()=2.4E-45;score=152.6;query 6-118;description=ProQ; ProP effector protein complement(1936432..1937118) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760862 YP_005232882.1 CDS STMMW_18361 NC_016854.1 1937216 1937800 R pfam_scan;Pfam:PF01590; E()=3.7E-9;score=36.5;query 57-179;description=GAF; hypothetical protein complement(1937216..1937800) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760863 YP_005232883.1 CDS STMMW_18371 NC_016854.1 1937842 1939125 D pfam_scan;Pfam:PF04403; E()=3.8E-35;score=120.1;query 65-220;description=PqiA; tmhmm; query 1-428; hypothetical protein 1937842..1939125 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760864 YP_005232884.1 CDS STMMW_18381 NC_016854.1 1939094 1941727 D pfam_scan;Pfam:PF02470; E()=2.2E-17;score=62.6;query46-137;description=MCE; tmhmm; query 1-878; hypothetical protein 1939094..1941727 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760865 YP_005232885.1 CDS STMMW_18391 NC_016854.1 1941805 1943244 D pfam_scan;Pfam:PF01189; E()=2.0E-52;score=177.5;query 202-478;description=Nol1_Nop2_Fmu; hypothetical protein 1941805..1943244 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760866 YP_005232886.1 CDS STMMW_18401 NC_016854.1 1943359 1943598 D pfam_scan;Pfam:PF07351; E()=1.3E-40;score=136.4;query 1-78;description=DUF1480; hypothetical protein 1943359..1943598 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760867 YP_005232887.1 CDS STMMW_18411 NC_016854.1 1943709 1943900 D pfam_scan;Pfam:PF07358; E()=2.2E-29;score=100.2;query 1-58;description=DUF1482; hypothetical protein 1943709..1943900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760868 YP_005232888.1 CDS STMMW_18421 NC_016854.1 1943919 1944569 R pfam_scan;Pfam:PF00149; E()=7.3E-18;score=63.8;query18- 187;description=Metallophos; serine/threonine protein phosphatase 1 complement(1943919..1944569) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760869 YP_005232889.1 CDS STMMW_18431 NC_016854.1 1944793 1944957 R tmhmm; query 1-55; hypothetical protein complement(1944793..1944957) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760870 YP_005232890.1 CDS STMMW_18441 NC_016854.1 1945242 1945964 R pfam_scan;Pfam:PF05364; E()=5.9E-45;score=150.0;query 2-75;description=SecIII_SopE_N; pfam_scan;Pfam:PF07487; E()=1.2E-108;score=359.5;query 76-240;description=SopE_GEF; invasion-associated secreted effector protein (sopE2) complement(1945242..1945964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760871 YP_005232891.1 CDS STMMW_18451 NC_016854.1 1946648 1947043 D pfam_scan;Pfam:PF07166; E()=4.4E-59;score=197.2;query 4-127;description=DUF1398; tmhmm; query 1-132; hypothetical protein 1946648..1947043 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760872 YP_005232892.1 CDS STMMW_18461 NC_016854.1 1947071 1947241 D hypothetical protein 1947071..1947241 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760873 YP_005232893.1 CDS STMMW_18471 NC_016854.1 1947298 1947849 D tmhmm; query 1-184; hypothetical protein 1947298..1947849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760874 YP_005232894.1 CDS STMMW_18481 NC_016854.1 1948237 1948656 R pfam_scan;Pfam:PF00583; E()=4.9E-10;score=39.0;query44- 115;description=Acetyltransf_1; putative acetyltransferase complement(1948237..1948656) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760875 YP_005232895.1 CDS STMMW_18491 NC_016854.1 1949026 1949295 D hypothetical protein 1949026..1949295 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760876 YP_005232896.1 CDS STMMW_18511 NC_016854.1 1949438 1949713 D hypothetical protein 1949438..1949713 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760877 YP_005232897.1 CDS STMMW_18541 NC_016854.1 1951807 1952160 R pfam_scan;Pfam:PF10709; E()=3.5E-43;score=145.6;query 2-112;description=DUF2511; hypothetical protein complement(1951807..1952160) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760880 YP_005232898.1 CDS STMMW_18551 NC_016854.1 1952177 1953052 R pfam_scan;Pfam:PF05425; E()=4.2E-28;score=97.1;query187-284;description=CopD; tmhmm; query 1-292; putative cation transporter complement(1952177..1953052) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760881 YP_005232899.1 CDS STMMW_18561 NC_016854.1 1953053 1953427 R pfam_scan;Pfam:PF04234; E()=1.4E-38;score=131.3;query 9-124;description=CopC; putative cation resistance protein complement(1953053..1953427) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760882 YP_005232900.1 CDS STMMW_18571 NC_016854.1 1953565 1953795 D pfam_scan;Pfam:PF06440; E()=4.8E-38;score=128.0;query 1-75;description=DNA_pol3_theta; DNA polymerase iii, theta subunit 1953565..1953795 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760883 YP_005232901.1 CDS STMMW_18581 NC_016854.1 1953903 1954559 D pfam_scan;Pfam:PF00795; E()=4.5E-14;score=51.8;query5- 114;description=CN_hydrolase; hypothetical protein 1953903..1954559 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760884 YP_005232902.1 CDS STMMW_18591 NC_016854.1 1954583 1955281 D pfam_scan;Pfam:PF00929; E()=1.1E-20;score=73.8;query4-147;description=Exonuc_X-T; exodeoxyribonuclease X 1954583..1955281 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760885 YP_005232903.1 CDS STMMW_18601 NC_016854.1 1955316 1957367 R pfam_scan;Pfam:PF02897; E()=4.5E-118;score=394.3;query 3-403;description=Peptidase_S9_N; pfam_scan;Pfam:PF00326; E()=2.3E-72;score=242.1;query 462-673;description=Peptidase_S9; oligopeptidase complement(1955316..1957367) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760886 YP_005232904.1 CDS STMMW_18611 NC_016854.1 1957580 1958239 R pfam_scan;Pfam:PF04391; E()=8.5E-54;score=181.4;query 31-210;description=DUF533; tmhmm; query 1-220; hypothetical protein complement(1957580..1958239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760887 YP_005232905.1 CDS STMMW_18621 NC_016854.1 1958333 1958686 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.995; 1.000; hypothetical protein complement(1958333..1958686) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760888 YP_005232906.1 CDS STMMW_18631 NC_016854.1 1958754 1959044 R pfam_scan;Pfam:PF07130; E()=4.6E-33;score=112.7;query 1-74;description=YebG; hypothetical protein complement(1958754..1959044) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760889 YP_005232907.1 CDS STMMW_18641 NC_016854.1 1959175 1960353 D pfam_scan;Pfam:PF02222; E()=7.9E-57;score=191.8;query 113-294;description=ATP-grasp; phosphoribosylglycinamide formyltransferase 2 1959175..1960353 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760890 YP_005232908.1 CDS STMMW_18651 NC_016854.1 1960453 1961094 R pfam_scan;Pfam:PF01081; E()=4.3E-93;score=309.7;query 9-203;description=Aldolase; KHG/KDPG aldolase complement(1960453..1961094) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760891 YP_005232909.1 CDS STMMW_18661 NC_016854.1 1961132 1962943 R pfam_scan;Pfam:PF00920; E()=2.1E-157;score=524.1;query 66-598;description=ILVD_EDD; 6-phosphogluconate dehydratase complement(1961132..1962943) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760892 YP_005232910.1 CDS STMMW_18671 NC_016854.1 1963178 1964653 R pfam_scan;Pfam:PF00479; E()=1.2E-58;score=197.7;query 13-186;description=G6PD_N; pfam_scan;Pfam:PF02781; E()=2.3E-130;score=433.7;query 188-489;description=G6PD_C; glucose 6-phosphate dehydrogenase complement(1963178..1964653) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760893 YP_005232911.1 CDS STMMW_18681 NC_016854.1 1964995 1965864 D pfam_scan;Pfam:PF01380; E()=3.1E-30;score=104.3;query 125-252;description=SIS; pfam_scan;Pfam:PF01418; E()=1.6E-36;score=124.1;query 1-106;description=HTH_6; putative transcriptional repressor 1964995..1965864 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760894 YP_005232912.1 CDS STMMW_18691 NC_016854.1 1965988 1967430 D pfam_scan;Pfam:PF02887; E()=7.9E-35;score=118.9;query 362-478;description=PK_C; pfam_scan;Pfam:PF00224; E()=4.8E-140;score=465.9;query 6-345;description=PK; pyruvate kinase A 1965988..1967430 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760895 YP_005232913.1 CDS STMMW_18701 NC_016854.1 1967503 1968474 R pfam_scan;Pfam:PF03279; E()=4.0E-117;score=389.9;query 12-305;description=Lip_A_acyltrans; tmhmm; query 1-324; lipid A acyltransferase complement(1967503..1968474) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760896 YP_005232914.1 CDS STMMW_18711 NC_016854.1 1968591 1969910 R pfam_scan;Pfam:PF08525; E()=3.1E-6;score=26.4;query 11-39;description=OapA_N; pfam_scan;Pfam:PF01551; E()=1.6E-36;score=123.7;query 312-406;description=Peptidase_M23; pfam_scan;Pfam:PF04225; E()=4.5E-8;score=32.6;query 96-170;description=OapA; tmhmm; query 1-440; hypothetical protein complement(1968591..1969910) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760897 YP_005232915.1 CDS STMMW_18721 NC_016854.1 1969926 1970927 R pfam_scan;Pfam:PF01297; E()=7.2E-78;score=261.3;query 28-331;description=SBP_bac_9; high-affinity zinc uptake system periplasmic binding protein complement(1969926..1970927) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760898 YP_005232916.1 CDS STMMW_18731 NC_016854.1 1970898 1971704 D pfam_scan;Pfam:PF00005; E()=1.3E-38;score=132.7;query 47-198;description=ABC_tran; high-affinity zinc uptake system ATP-binding protein 1970898..1971704 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760899 YP_005232917.1 CDS STMMW_18741 NC_016854.1 1971701 1972486 D pfam_scan;Pfam:PF00950; E()=1.1E-85;score=286.7;query 2-257;description=ABC-3; tmhmm; query 1-262; high-affinity zinc uptake system membrane protein 1971701..1972486 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760900 YP_005232918.1 CDS STMMW_18751 NC_016854.1 1972565 1973494 R pfam_scan;Pfam:PF05491; E()=8.1E-33;score=111.3;query 229-303;description=RuvB_C; pfam_scan;Pfam:PF05496; E()=5.1E-112;score=372.5;query 1-211;description=RuvB_N; Holliday junction DNA helicase ruvB; Holliday junction DNA helicase complement(1972565..1973494) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760901 YP_005232919.1 CDS STMMW_18761 NC_016854.1 1973584 1974195 R pfam_scan;Pfam:PF07499; E()=4.8E-15;score=54.8;query158-201;description=RuvA_C; pfam_scan;Pfam:PF01330; E()=2.3E-21;score=74.8;query2-62;description=RuvA_N; Holliday junction DNA helicase ruvA; Holliday junction DNA helicase complement(1973584..1974195) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760902 YP_005232920.1 CDS STMMW_18801 NC_016854.1 1976137 1976736 D pfam_scan;Pfam:PF05708; E()=4.5E-45;score=152.7;query 8-184;description=DUF830; hypothetical protein 1976137..1976736 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760905 YP_005232921.1 CDS STMMW_18811 NC_016854.1 1976738 1977259 R pfam_scan;Pfam:PF02075; E()=1.5E-66;score=223.0;query 4-150;description=RuvC; Holliday juction resolvase ruvC; Holliday junction nuclease ruvC; crossover junction endodeoxyribonuclease; Crossover junction endodeoxyribonuclease ruvC complement(1976738..1977259) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760906 YP_005232922.1 CDS STMMW_18821 NC_016854.1 1977296 1978036 R pfam_scan;Pfam:PF01709; E()=1.5E-103;score=345.0;query 5-236;description=DUF28; hypothetical protein complement(1977296..1978036) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760907 YP_005232923.1 CDS STMMW_18831 NC_016854.1 1978066 1978518 R pfam_scan;Pfam:PF00293; E()=7.3E-25;score=86.9;query9-146;description=NUDIX; dATP pyrophosphohydrolase complement(1978066..1978518) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760908 YP_005232924.1 CDS STMMW_18841 NC_016854.1 1978621 1980393 R pfam_scan;Pfam:PF01336; E()=6.7E-17;score=60.6;query18-102;description=tRNA_anti; pfam_scan;Pfam:PF00152; E()=4.1E-149;score=496.3;query 118-558;description=tRNA-synt_2; pfam_scan;Pfam:PF02938; E()=1.7E-31;score=107.8;query 307-406;description=GAD; Aspartate--tRNA ligase; aspartyl-tRNA synthetase; AspRS complement(1978621..1980393) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760909 YP_005232925.1 CDS STMMW_18851 NC_016854.1 1980718 1981284 D pfam_scan;Pfam:PF00857; E()=1.2E-41;score=141.6;query 9-183;description=Isochorismatase; putative hydrolase 1980718..1981284 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760910 YP_005232926.1 CDS STMMW_18861 NC_016854.1 1981281 1982099 D pfam_scan;Pfam:PF01904; E()=2.1E-53;score=180.7;query 21-249;description=DUF72; hypothetical protein 1981281..1982099 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760911 YP_005232927.1 CDS STMMW_18871 NC_016854.1 1982152 1982547 D pfam_scan;Pfam:PF01124; E()=1.5E-25;score=89.1;query4-120;description=MAPEG; tmhmm; query 1-132; hypothetical protein 1982152..1982547 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760912 YP_005232928.1 CDS STMMW_18881 NC_016854.1 1982588 1983331 D pfam_scan;Pfam:PF08241; E()=9.3E-11;score=41.5;query62- 162;description=Methyltransf_11; hypothetical protein 1982588..1983331 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760913 YP_005232929.1 CDS STMMW_18891 NC_016854.1 1983328 1984299 D pfam_scan;Pfam:PF08003; E()=1.6E-175;score=582.2;query 1-322;description=Methyltransf_9; hypothetical protein 1983328..1984299 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760914 YP_005232930.1 CDS STMMW_18901 NC_016854.1 1984535 1985281 R pfam_scan;Pfam:PF03932; E()=6.9E-81;score=270.1;query 3-200;description=CutC; putative copper homeostasis protein complement(1984535..1985281) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760915 YP_005232931.1 CDS STMMW_18911 NC_016854.1 1985301 1985870 R pfam_scan;Pfam:PF06185; E()=8.6E-73;score=243.4;query 6-185;description=YecM; hypothetical protein complement(1985301..1985870) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760916 YP_005232932.1 CDS STMMW_18921 NC_016854.1 1986107 1987840 D pfam_scan;Pfam:PF05746; E()=9.4E-37;score=125.2;query 460-577;description=DALR_1; pfam_scan;Pfam:PF00750; E()=7.5E-144;score=478.6;query 95-446;description=tRNA-synt_1d; pfam_scan;Pfam:PF03485; E()=1.2E-21;score=76.6;query7- 87;description=Arg_tRNA_synt_N; arginine--tRNA ligase; arginyl-tRNA synthetase; ArgRS 1986107..1987840 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760917 YP_005232933.1 CDS STMMW_18931 NC_016854.1 1988029 1989900 D pfam_scan;Pfam:PF00905; E()=1.7E-65;score=220.5;query 268-607;description=Transpeptidase; pfam_scan;Pfam:PF03717; E()=1.7E-44;score=151.5;query 60-234;description=PBP_dimer; tmhmm; query 1-624; penicillin-binding protein 1988029..1989900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760918 YP_005232934.1 CDS STMMW_18941 NC_016854.1 1989954 1991093 R pfam_scan;Pfam:PF07470; E()=1.9E-118;score=395.0;query 38-378;description=Glyco_hydro_88; hypothetical protein complement(1989954..1991093) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760919 YP_005232935.1 CDS STMMW_18951 NC_016854.1 1991330 1991722 R pfam_scan;Pfam:PF06366; E()=1.8E-52;score=175.9;query 4-130;description=FlhE; flagellar protein FlhE complement(1991330..1991722) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760920 YP_005232936.1 CDS STMMW_18961 NC_016854.1 1991722 1993800 R pfam_scan;Pfam:PF00771; E()=6.7E-274;score=910.0;query 31-682;description=FHIPEP; tmhmm; query 1-693; flagellar biosynthesis protein FlhA complement(1991722..1993800) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760921 YP_005232937.1 CDS STMMW_18971 NC_016854.1 1993793 1994944 R pfam_scan;Pfam:PF01312; E()=8.1E-130;score=432.2;query 6-348;description=Bac_export_2; tmhmm; query 1-384; flagellar biosynthetic protein FlhB complement(1993793..1994944) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760922 YP_005232938.1 CDS STMMW_18981 NC_016854.1 1995138 1995782 R pfam_scan;Pfam:PF04344; E()=3.7E-75;score=251.8;query 16-214;description=CheZ; chemotaxis protein CheZ complement(1995138..1995782) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760923 YP_005232939.1 CDS STMMW_18991 NC_016854.1 1995793 1996182 R pfam_scan;Pfam:PF00072; E()=2.6E-33;score=114.0;query 9-120;description=Response_reg; chemotaxis protein CheY complement(1995793..1996182) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760924 YP_005232940.1 CDS STMMW_19001 NC_016854.1 1996200 1997249 R pfam_scan;Pfam:PF00072; E()=2.6E-22;score=78.6;query6- 108;description=Response_reg; pfam_scan;Pfam:PF01339; E()=4.8E-72;score=240.8;query 158-338;description=CheB_methylest; protein-glutamate methylesterase; Chemotaxis response regulator protein-glutamate methylesterase complement(1996200..1997249) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760925 YP_005232941.1 CDS STMMW_19011 NC_016854.1 1997246 1998112 R pfam_scan;Pfam:PF01739; E()=4.0E-60;score=202.0;query 92-281;description=CheR; pfam_scan;Pfam:PF03705; E()=6.2E-21;score=72.9;query23-77;description=CheR_N; chemotaxis protein methyltransferase complement(1997246..1998112) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760926 YP_005232942.1 CDS STMMW_19021 NC_016854.1 1998266 2000158 R pfam_scan;Pfam:PF00672; E()=1.3E-15;score=56.5;query272-339;description=HAMP; pfam_scan;Pfam:PF02203; E()=2.3E-35;score=121.1;query 122-255;description=TarH; pfam_scan;Pfam:PF00015; E()=1.2E-72;score=243.7;query 399-592;description=MCPsignal; tmhmm; query 1-631; methyl-accepting chemotaxis protein II complement(1998266..2000158) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760927 YP_005232943.1 CDS STMMW_19031 NC_016854.1 2000164 2000667 R pfam_scan;Pfam:PF01584; E()=1.0E-39;score=135.3;query 18-155;description=CheW; purine binding chemotaxis protein complement(2000164..2000667) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760928 YP_005232944.1 CDS STMMW_19041 NC_016854.1 2000688 2002703 R pfam_scan;Pfam:PF01584; E()=2.1E-29;score=101.9;query 531-657;description=CheW; pfam_scan;Pfam:PF02518; E()=7.0E-21;score=73.7;query389-524;description=HATPase_c; pfam_scan;Pfam:PF09078; E()=3.0E-23;score=80.7;query165-229;description=CheY- binding; pfam_scan;Pfam:PF01627; E()=5.0E-21;score=73.8;query8-106;description=Hpt; pfam_scan;Pfam:PF02895; E()=1.6E-19;score=69.3;query278-341;description=H- kinase_dim; chemotaxis protein CheA complement(2000688..2002703) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760929 YP_005232945.1 CDS STMMW_19051 NC_016854.1 2002708 2003637 R pfam_scan;Pfam:PF00691; E()=3.2E-13;score=49.4;query161-259;description=OmpA; tmhmm; query 1-310; motility protein B complement(2002708..2003637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760930 YP_005232946.1 CDS STMMW_19061 NC_016854.1 2003634 2004464 R pfam_scan;Pfam:PF01618; E()=3.0E-5;score=23.3;query 118-219;description=MotA_ExbB; tmhmm; query 1-277; motility protein A complement(2003634..2004464) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760931 YP_005232947.1 CDS STMMW_19071 NC_016854.1 2004645 2005229 R pfam_scan;Pfam:PF05280; E()=1.4E-86;score=287.8;query 3-176;description=FlhC; flagellar transcriptional activator complement(2004645..2005229) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760932 YP_005232948.1 CDS STMMW_19081 NC_016854.1 2005226 2005576 R pfam_scan;Pfam:PF05247; E()=1.1E-44;score=150.1;query 4-106;description=FlhD; flagellar transcriptional activator FlhD; Transcriptional activator flhD complement(2005226..2005576) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760933 YP_005232949.1 CDS STMMW_19091 NC_016854.1 2006250 2006366 D hypothetical protein 2006250..2006366 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760934 YP_005232950.1 CDS STMMW_19101 NC_016854.1 2006363 2006791 D pfam_scan;Pfam:PF00582; E()=3.0E-16;score=59.9;query3-138;description=Usp; hypothetical protein 2006363..2006791 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760935 YP_005232951.1 CDS STMMW_19111 NC_016854.1 2006809 2008230 R pfam_scan;Pfam:PF00982; E()=1.3E-148;score=495.0;query 17-451;description=Glyco_transf_20; trehalose-6-phosphate synthase complement(2006809..2008230) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760936 YP_005232952.1 CDS STMMW_19121 NC_016854.1 2008205 2009008 R pfam_scan;Pfam:PF02358; E()=4.7E-56;score=189.1;query 18-232;description=Trehalose_PPase; trehalose phosphatase complement(2008205..2009008) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760937 YP_005232953.1 CDS STMMW_19131 NC_016854.1 2009642 2010199 R pfam_scan;Pfam:PF01965; E()=3.0E-24;score=84.8;query34-167;description=DJ-1_PfpI; hypothetical protein complement(2009642..2010199) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760938 YP_005232954.1 CDS STMMW_19141 NC_016854.1 2010750 2011253 D pfam_scan;Pfam:PF00210; E()=4.7E-25;score=87.7;query8-143;description=Ferritin; ferritin-like protein 2010750..2011253 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760939 YP_005232955.1 CDS STMMW_19151 NC_016854.1 2011432 2012070 R pfam_scan;Pfam:PF02502; E()=1.9E-19;score=69.2;query2-121;description=LacAB_rpiB; Putative sugar phosphate isomerase complement(2011432..2012070) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760940 YP_005232956.1 CDS STMMW_19161 NC_016854.1 2012326 2012661 D Signal peptide; signalp; query 1-25;cleavage_site_probability=0.508; 0.999; putative lipoprotein 2012326..2012661 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760941 YP_005232957.1 CDS STMMW_19171 NC_016854.1 2012901 2013398 D pfam_scan;Pfam:PF00210; E()=2.0E-39;score=134.2;query 7-143;description=Ferritin; ferritin 2012901..2013398 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760942 YP_005232958.1 CDS STMMW_19181 NC_016854.1 2013444 2013683 R pfam_scan;Pfam:PF10678; E()=1.1E-33;score=114.1;query 1-78;description=DUF2492; hypothetical protein complement(2013444..2013683) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760943 YP_005232959.1 CDS STMMW_19191 NC_016854.1 2013910 2015121 D pfam_scan;Pfam:PF03222; E()=3.8E-142;score=473.2;query 3-390;description=Trp_Tyr_perm; tmhmm; query 1-404; tyrosine-specific transport protein 2013910..2015121 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760944 YP_005232960.1 CDS STMMW_19201 NC_016854.1 2015196 2015861 R pfam_scan;Pfam:PF02810; E()=1.1E-9;score=36.3;query 203-220;description=SEC-C; hypothetical protein complement(2015196..2015861) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760945 YP_005232961.1 CDS STMMW_19211 NC_016854.1 2016099 2016425 R hypothetical protein complement(2016099..2016425) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760946 YP_005232962.1 CDS STMMW_19231 NC_016854.1 2018290 2018622 R tmhmm; query 1-111; hypothetical protein complement(2018290..2018622) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760948 YP_005232963.1 CDS STMMW_19241 NC_016854.1 2019323 2019871 R pfam_scan;Pfam:PF01066; E()=3.7E-25;score=88.4;query36-161;description=CDP- OH_P_transf; tmhmm; query 1-183; phosphotidylglycerophosphate synthetase complement(2019323..2019871) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760950 YP_005232964.1 CDS STMMW_19251 NC_016854.1 2019928 2021760 R pfam_scan;Pfam:PF02151; E()=4.2E-9;score=35.4;query 204-237;description=UVR; pfam_scan;Pfam:PF08459; E()=1.4E-53;score=180.1;query 383-542;description=UvrC_HhH_N; pfam_scan;Pfam:PF00633; E()=6.5E-7;score=27.9;query 579-606;description=HHH; pfam_scan;Pfam:PF01541; E()=3.4E-13;score=49.6;query17-93;description=GIY-YIG; UvrC protein; excinuclease ABC subunit C; UvrABC system protein C complement(2019928..2021760) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760951 YP_005232965.1 CDS STMMW_19261 NC_016854.1 2021757 2022413 R pfam_scan;Pfam:PF00196; E()=8.6E-21;score=72.7;query148-204;description=GerE; pfam_scan;Pfam:PF00072; E()=8.4E-32;score=109.2;query 4-116;description=Response_reg; invasion response-regulator complement(2021757..2022413) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760952 YP_005232966.1 CDS STMMW_19262 NC_016854.1 2022476 2022553 R hypothetical protein complement(2022476..2022553) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760953 YP_005232967.1 CDS STMMW_19271 NC_016854.1 2022725 2022880 D putative inner membrane protein 2022725..2022880 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760954 YP_005232968.1 CDS STMMW_19281 NC_016854.1 2022877 2023101 D pfam_scan;Pfam:PF10769; E()=1.2E-40;score=136.5;query 1-74;description=DUF2594; hypothetical protein 2022877..2023101 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760955 YP_005232969.1 CDS STMMW_19291 NC_016854.1 2023168 2023890 R pfam_scan;Pfam:PF00196; E()=6.3E-20;score=69.9;query178-234;description=GerE; pfam_scan;Pfam:PF03472; E()=7.5E-35;score=119.2;query 23-160;description=Autoind_bind; cell-division regulatory protein complement(2023168..2023890) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760956 YP_005232970.1 CDS STMMW_19301 NC_016854.1 2024122 2024874 R pfam_scan;Pfam:PF00005; E()=1.4E-52;score=178.3;query 29-205;description=ABC_tran; putative ABC-transport ATP-binding protein complement(2024122..2024874) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760957 YP_005232971.1 CDS STMMW_19311 NC_016854.1 2024871 2025539 R pfam_scan;Pfam:PF00528; E()=1.2E-27;score=96.2;query33- 214;description=BPD_transp_1; tmhmm; query 1-223; putative ABC transporter membrane protein complement(2024871..2025539) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760958 YP_005232972.1 CDS STMMW_19321 NC_016854.1 2025560 2026546 R pfam_scan;Pfam:PF00291; E()=3.2E-42;score=144.9;query 17-316;description=PALP; D-cysteine desulfhydrase complement(2025560..2026546) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760959 YP_005232973.1 CDS STMMW_19331 NC_016854.1 2026700 2027500 R pfam_scan;Pfam:PF00497; E()=4.9E-77;score=258.7;query 43-261;description=SBP_bac_3; cystine-binding periplasmic protein (FliY) complement(2026700..2027500) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760960 YP_005232974.1 CDS STMMW_19341 NC_016854.1 2027647 2028198 R pfam_scan;Pfam:PF02899; E()=1.8E-12;score=46.8;query91- 166;description=Phage_integr_N; regulatory protein (FliZ) complement(2027647..2028198) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760961 YP_005232975.1 CDS STMMW_19351 NC_016854.1 2028257 2028976 R pfam_scan;Pfam:PF04545; E()=3.9E-16;score=58.2;query185- 233;description=Sigma70_r4; pfam_scan;Pfam:PF04539; E()=1.0E-17;score=63.5;query90-167;description=Sigma70_r3; pfam_scan;Pfam:PF04542; E()=1.2E-15;score=56.7;query16-88;description=Sigma70_r2; RNA polymerase sigma transcription factor for flagellar operon complement(2028257..2028976) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760962 YP_005232976.1 CDS STMMW_19361 NC_016854.1 2029245 2029703 R pfam_scan;Pfam:PF01797; E()=6.0E-40;score=135.3;query 12-129;description=Transposase_17; transposase for insertion sequence element IS200 complement(2029245..2029703) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760963 YP_005232977.1 CDS STMMW_19371 NC_016854.1 2029884 2031089 R lysine-N-methylase complement(2029884..2031089) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760964 YP_005232978.1 CDS STMMW_19381 NC_016854.1 2031168 2032655 R pfam_scan;Pfam:PF00669; E()=3.1E-43;score=146.6;query 5-143;description=Flagellin_N; pfam_scan;Pfam:PF00700; E()=2.4E-26;score=91.2;query410- 494;description=Flagellin_C; pfam_scan;Pfam:PF08884; E()=1.4E-22;score=79.3;query193- 280;description=Flagellin_D3; flagellin complement(2031168..2032655) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760965 YP_005232979.1 CDS STMMW_19401 NC_016854.1 2032912 2034315 D pfam_scan;Pfam:PF07196; E()=3.7E-8;score=32.9;query 130-186;description=Flagellin_IN; pfam_scan;Pfam:PF07195; E()=1.9E-67;score=226.9;query 224-452;description=FliD_C; pfam_scan;Pfam:PF02465; E()=1.7E-23;score=82.8;query10-107;description=FliD_N; flagellar hook associated protein (FliD) 2032912..2034315 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760966 YP_005232980.1 CDS STMMW_19411 NC_016854.1 2034330 2034737 D pfam_scan;Pfam:PF02561; E()=9.2E-36;score=122.4;query 6-127;description=FliS; flagellar protein FliS 2034330..2034737 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760967 YP_005232981.1 CDS STMMW_19421 NC_016854.1 2034737 2035105 D pfam_scan;Pfam:PF05400; E()=1.2E-37;score=127.6;query 1-108;description=FliT; flagellar protein FliT 2034737..2035105 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760968 YP_005232982.1 CDS STMMW_19431 NC_016854.1 2035177 2036661 D pfam_scan;Pfam:PF00128; E()=3.7E-60;score=203.1;query 7-382;description=Alpha-amylase; alpha-amylase 2035177..2036661 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760969 YP_005232983.1 CDS STMMW_19441 NC_016854.1 2036701 2037114 R Signal peptide; signalp; query 1-20;cleavage_site_probability=0.835; 0.972; putative lipoprotein complement(2036701..2037114) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760970 YP_005232984.1 CDS STMMW_19451 NC_016854.1 2037240 2038505 D pfam_scan;Pfam:PF04143; E()=3.5E-9;score=36.2;query 133-173;description=DUF395; tmhmm; query 1-422; hypothetical protein 2037240..2038505 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760971 YP_005232985.1 CDS STMMW_19461 NC_016854.1 2038502 2038735 D pfam_scan;Pfam:PF01206; E()=3.7E-21;score=74.1;query9-77;description=SirA; hypothetical protein 2038502..2038735 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760972 YP_005232986.1 CDS STMMW_19471 NC_016854.1 2039000 2039386 D tmhmm; query 1-129; hypothetical protein 2039000..2039386 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760973 YP_005232987.1 CDS STMMW_19481 NC_016854.1 2039506 2039820 R pfam_scan;Pfam:PF02049; E()=1.5E-26;score=92.0;query12-104;description=FliE; flagellar hook-basal body complex protein FliE complement(2039506..2039820) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760974 YP_005232988.1 CDS STMMW_19491 NC_016854.1 2040037 2041719 D pfam_scan;Pfam:PF08345; E()=4.1E-48;score=163.0;query 253-437;description=YscJ_FliF_C; pfam_scan;Pfam:PF01514; E()=6.0E-65;score=218.0;query 31-226;description=YscJ_FliF; tmhmm; query 1-561; flagellar basal-body M-ring protein 2040037..2041719 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760975 YP_005232989.1 CDS STMMW_19501 NC_016854.1 2041712 2042707 D pfam_scan;Pfam:PF01706; E()=1.9E-40;score=136.7;query 216-323;description=FliG_C; flagellar motor switch protein FliG 2041712..2042707 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760976 YP_005232990.1 CDS STMMW_19511 NC_016854.1 2042679 2043407 D pfam_scan;Pfam:PF02108; E()=3.4E-40;score=136.3;query 110-233;description=FliH; flagellar assembly protein FliH 2042679..2043407 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760977 YP_005232991.1 CDS STMMW_19521 NC_016854.1 2043407 2044777 D pfam_scan;Pfam:PF00006; E()=1.3E-91;score=305.2;query 161-373;description=ATP-synt_ab; flagellum-specific ATP synthase 2043407..2044777 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760978 YP_005232992.1 CDS STMMW_19531 NC_016854.1 2044799 2045242 D pfam_scan;Pfam:PF02050; E()=8.4E-42;score=141.8;query 3-144;description=FliJ; flagellar FliJ protein 2044799..2045242 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760979 YP_005232993.1 CDS STMMW_19541 NC_016854.1 2045239 2046456 D pfam_scan;Pfam:PF02120; E()=6.6E-22;score=76.4;query277-359;description=Flg_hook; flagellar hook-length control protein 2045239..2046456 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760980 YP_005232994.1 CDS STMMW_19551 NC_016854.1 2046561 2047028 D pfam_scan;Pfam:PF03748; E()=9.2E-33;score=113.0;query 13-154;description=FliL; tmhmm; query 1-156; FliL protein 2046561..2047028 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760981 YP_005232995.1 CDS STMMW_19561 NC_016854.1 2047033 2048037 D pfam_scan;Pfam:PF02154; E()=7.0E-80;score=266.4;query 38-231;description=FliM; pfam_scan;Pfam:PF01052; E()=1.3E-15;score=56.4;query252-322;description=SpoA; flagellar motor switch protein FliM 2047033..2048037 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760982 YP_005232996.1 CDS STMMW_19571 NC_016854.1 2048034 2048447 D pfam_scan;Pfam:PF01052; E()=4.2E-23;score=80.4;query56-128;description=SpoA; flagellar motor switch protein FliN 2048034..2048447 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760983 YP_005232997.1 CDS STMMW_19581 NC_016854.1 2048447 2048824 D pfam_scan;Pfam:PF04347; E()=6.2E-26;score=89.7;query37-121;description=FliO; tmhmm; query 1-126; flagellar protein FliO 2048447..2048824 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760984 YP_005232998.1 CDS STMMW_19591 NC_016854.1 2048824 2049561 D pfam_scan;Pfam:PF00813; E()=1.2E-84;score=282.3;query 48-239;description=FliP; tmhmm; query 1-246; flagellar biosynthetic protein FliP 2048824..2049561 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760985 YP_005232999.1 CDS STMMW_19601 NC_016854.1 2049571 2049840 D pfam_scan;Pfam:PF01313; E()=6.1E-30;score=102.2;query 5-78;description=Bac_export_3; tmhmm; query 1-90; flagellar biosynthetic protein FliQ 2049571..2049840 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760986 YP_005233000.1 CDS STMMW_19611 NC_016854.1 2049849 2050643 D pfam_scan;Pfam:PF01311; E()=2.4E-72;score=242.8;query 8-251;description=Bac_export_1; tmhmm; query 1-265; flagellar biosynthetic protein FliR 2049849..2050643 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760987 YP_005233001.1 CDS STMMW_19621 NC_016854.1 2050925 2051548 D pfam_scan;Pfam:PF00196; E()=6.1E-17;score=60.4;query137-191;description=GerE; colanic acid capsullar biosynthesis activation protein A 2050925..2051548 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760988 YP_005233002.1 CDS STMMW_19631 NC_016854.1 2051587 2051784 R pfam_scan;Pfam:PF10781; E()=7.0E-39;score=130.6;query 2-62;description=DSRB; DsrB protein complement(2051587..2051784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760989 YP_005233003.1 CDS STMMW_19641 NC_016854.1 2051910 2052137 D pfam_scan;Pfam:PF10733; E()=4.2E-35;score=118.8;query 18-75;description=DUF2525; hypothetical protein 2051910..2052137 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760990 YP_005233004.1 CDS STMMW_19651 NC_016854.1 2052447 2053262 D pfam_scan;Pfam:PF08282; E()=3.9E-13;score=49.2;query10- 232;description=Hydrolase_3; MPGP. Putative mannosyl-3-phosphoglycerate phosphatase EC 3.1.3.70; Mannosyl-3-phosphoglycerate phosphatase; protein; MPGP 2052447..2053262 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760991 YP_005233005.1 CDS STMMW_19661 NC_016854.1 2053241 2054953 R pfam_scan;Pfam:PF00990; E()=8.2E-48;score=161.7;query 398-557;description=GGDEF; tmhmm; query 1-571; hypothetical protein complement(2053241..2054953) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760992 YP_005233006.1 CDS STMMW_19671 NC_016854.1 2055118 2055363 R pfam_scan;Pfam:PF09926; E()=1.3E-15;score=55.9;query23-69;description=DUF2158; hypothetical protein complement(2055118..2055363) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760993 YP_005233007.1 CDS STMMW_19681 NC_016854.1 2055380 2056291 R pfam_scan;Pfam:PF05661; E()=8.4E-135;score=448.0;query 1-292;description=DUF808; tmhmm; query 1-304; hypothetical protein complement(2055380..2056291) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760994 YP_005233008.1 CDS STMMW_19691 NC_016854.1 2056467 2057387 D pfam_scan;Pfam:PF00892; E()=1.4E-23;score=82.9;query18-140;description=DUF6; tmhmm; query 1-307; hypothetical protein 2056467..2057387 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760995 YP_005233009.1 CDS STMMW_19701 NC_016854.1 2057376 2057846 R pfam_scan;Pfam:PF03852; E()=5.2E-29;score=99.1;query2-74;description=Vsr; patch repair protein complement(2057376..2057846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760996 YP_005233010.1 CDS STMMW_19711 NC_016854.1 2057827 2059257 R deleted EC_number 2.1.1.73; pfam_scan;Pfam:PF00145; E()=2.4E-76;score=256.7;query 91-452;description=DNA_methylase; DNA-cytosine methyltransferase complement(2057827..2059257) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760997 YP_005233011.1 CDS STMMW_19721 NC_016854.1 2059331 2060026 R pfam_scan;Pfam:PF01966; E()=2.3E-13;score=49.6;query29-131;description=HD; hypothetical protein complement(2059331..2060026) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760998 YP_005233012.1 CDS STMMW_19731 NC_016854.1 2060118 2060417 R tmhmm; query 1-100; hypothetical protein complement(2060118..2060417) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11760999 YP_005233013.1 CDS STMMW_19741 NC_016854.1 2061068 2062273 D pfam_scan;Pfam:PF00267; E()=9.7E-152;score=504.4;query 27-401;description=Porin_1; outer membrane protein S1 2061068..2062273 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761000 YP_005233014.1 CDS STMMW_19751 NC_016854.1 2062733 2062945 R pfam_scan;Pfam:PF00313; E()=2.5E-32;score=109.8;query 5-69;description=CSD; cold shock protein complement(2062733..2062945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761001 YP_005233015.1 CDS STMMW_19752 NC_016854.1 2063192 2063311 R hypothetical protein complement(2063192..2063311) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761002 YP_005233016.1 CDS STMMW_19761 NC_016854.1 2063400 2064668 R pfam_scan;Pfam:PF11798; E()=4.4E-7;score=29.2;query 173-200;description=IMS_HHH; pfam_scan;Pfam:PF00817; E()=3.9E-43;score=146.3;query 5-150;description=IMS; pfam_scan;Pfam:PF11799; E()=5.4E-18;score=64.7;query214-341;description=IMS_C; DNA repair protein complement(2063400..2064668) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761003 YP_005233017.1 CDS STMMW_19781 NC_016854.1 2064671 2065090 R pfam_scan;Pfam:PF00717; E()=2.6E-16;score=58.6;query56- 119;description=Peptidase_S24; DNA repair protein complement(2064671..2065090) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761004 YP_005233018.1 CDS STMMW_19791 NC_016854.1 2065217 2065378 R hypothetical protein complement(2065217..2065378) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761005 YP_005233019.1 CDS STMMW_19801 NC_016854.1 2065356 2065598 R tmhmm; query 1-81; hypothetical protein complement(2065356..2065598) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761006 YP_005233020.1 CDS STMMW_19812 NC_016854.1 2066443 2067450 D none; phage protein 2066443..2067450 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761008 YP_005233021.1 CDS STMMW_19831 NC_016854.1 2067735 2068304 R pfam_scan;Pfam:PF02413; E()=9.4E-35;score=119.4;query 43-188;description=Caudo_TAP; putative phage tail protein complement(2067735..2068304) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761009 YP_005233022.1 CDS STMMW_19841 NC_016854.1 2068304 2069866 R none; putative phage tail fiber protein complement(2068304..2069866) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761010 YP_005233023.1 CDS STMMW_19851 NC_016854.1 2069853 2070440 R none; pfam_scan;Pfam:PF10076; E()=7.1E-54;score=181.6;query 10-186;description=DUF2313; putative phage tail protein complement(2069853..2070440) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761011 YP_005233024.1 CDS STMMW_19861 NC_016854.1 2070443 2070964 R pfam_scan;Pfam:PF04865; E()=2.7E-24;score=85.5;query2-131;description=Baseplate_J; putative phage tail protein complement(2070443..2070964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761012 YP_005233025.1 CDS STMMW_19871 NC_016854.1 2070999 2071544 R pfam_scan;Pfam:PF04865; E()=1.4E-20;score=73.4;query75- 180;description=Baseplate_J; phage protein complement(2070999..2071544) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761013 YP_005233026.1 CDS STMMW_19881 NC_016854.1 2071516 2071929 R pfam_scan;Pfam:PF07409; E()=3.7E-45;score=151.8;query 18-132;description=GP46; phage protein complement(2071516..2071929) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761014 YP_005233027.1 CDS STMMW_19891 NC_016854.1 2071934 2072467 R pfam_scan;Pfam:PF06890; E()=1.0E-68;score=229.6;query 11-166;description=Phage_Mu_Gp45; putative phage baseplate protein complement(2071934..2072467) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761015 YP_005233028.1 CDS STMMW_19901 NC_016854.1 2072467 2073525 R none; pfam_scan;Pfam:PF05954; E()=1.8E-67;score=227.3;query 4-329;description=Phage_GPD; phage tail protein complement(2072467..2073525) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761016 YP_005233029.1 CDS STMMW_19911 NC_016854.1 2073522 2074862 R none; pfam_scan;Pfam:PF07157; E()=5.9E-39;score=131.5;query 9-101;description=DNA_circ_N; hypothetical protein complement(2073522..2074862) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761017 YP_005233030.1 CDS STMMW_19921 NC_016854.1 2074896 2076824 R none; pfam_scan;Pfam:PF10145; E()=6.4E-41;score=140.1;query 86-290;description=PhageMin_Tail; tmhmm; query 1-643; phage tape-measure protein complement(2074896..2076824) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761018 YP_005233031.1 CDS STMMW_19932 NC_016854.1 2076909 2077235 R phage protein complement(2076909..2077235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761019 YP_005233032.1 CDS STMMW_19941 NC_016854.1 2077232 2077588 R pfam_scan;Pfam:PF10618; E()=3.1E-41;score=139.4;query 1-118;description=Tail_tube; phage tail tube protein complement(2077232..2077588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761020 YP_005233033.1 CDS STMMW_19951 NC_016854.1 2077588 2079084 R none; pfam_scan;Pfam:PF04984; E()=2.8E-85;score=286.6;query 1-489;description=Phage_sheath_1; phage tail sheath protein complement(2077588..2079084) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761021 YP_005233034.1 CDS STMMW_19961 NC_016854.1 2079242 2079802 R none; phage protein complement(2079242..2079802) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761022 YP_005233035.1 CDS STMMW_19971 NC_016854.1 2079799 2080260 R phage protein complement(2079799..2080260) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761023 YP_005233036.1 CDS STMMW_19981 NC_016854.1 2080283 2080687 R pfam_scan;Pfam:PF05521; E()=5.2E-18;score=64.7;query21- 115;description=Phage_H_T_join; phage protein complement(2080283..2080687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761024 YP_005233037.1 CDS STMMW_19991 NC_016854.1 2080684 2081007 R pfam_scan;Pfam:PF05135; E()=6.6E-10;score=38.7;query1-104;description=Phage_QLRG; phage protein complement(2080684..2081007) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761025 YP_005233038.1 CDS STMMW_20001 NC_016854.1 2081261 2082466 R none; pfam_scan;Pfam:PF05065; E()=9.1E-79;score=264.4;query 115-398;description=Phage_capsid; Major phage capsid protein complement(2081261..2082466) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761026 YP_005233039.1 CDS STMMW_20011 NC_016854.1 2082481 2083131 R none; pfam_scan;Pfam:PF04586; E()=3.0E-43;score=146.8;query 11-163;description=Peptidase_U35; phage prohead protease complement(2082481..2083131) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761027 YP_005233040.1 CDS STMMW_20021 NC_016854.1 2083109 2084224 R none; pfam_scan;Pfam:PF04860; E()=1.2E-120;score=402.1;query 1-331;description=Phage_portal; phage portal protein complement(2083109..2084224) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761028 YP_005233041.1 CDS STMMW_20031 NC_016854.1 2084544 2086277 R none; pfam_scan;Pfam:PF03354; E()=4.6E-105;score=351.5;query 86-560;description=Terminase_1; phage terminase (large subunit) complement(2084544..2086277) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761029 YP_005233042.1 CDS STMMW_20041 NC_016854.1 2086274 2086768 R pfam_scan;Pfam:PF05119; E()=3.5E-26;score=91.1;query56- 153;description=Terminase_4; phage terminase (small subunit) complement(2086274..2086768) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761030 YP_005233043.1 CDS STMMW_20051 NC_016854.1 2086894 2087244 R pfam_scan;Pfam:PF01844; E()=1.4E-16;score=59.1;query64-113;description=HNH; phage protein complement(2086894..2087244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761031 YP_005233044.1 CDS STMMW_20061 NC_016854.1 2087305 2087607 R phage protein complement(2087305..2087607) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761032 YP_005233045.1 CDS STMMW_20071 NC_016854.1 2087827 2088246 R pfam_scan;Pfam:PF04383; E()=1.2E-16;score=60.5;query10-113;description=KilA-N; phage protein complement(2087827..2088246) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761033 YP_005233046.1 CDS STMMW_20081 NC_016854.1 2088459 2088944 R pfam_scan;Pfam:PF03245; E()=1.6E-59;score=199.7;query 15-160;description=Phage_lysis; phage lysozyme complement(2088459..2088944) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761034 YP_005233047.1 CDS STMMW_20101 NC_016854.1 2088941 2089555 R none; pfam_scan;Pfam:PF00182; E()=2.1E-8;score=33.4;query 113-172;description=Glyco_hydro_19; phage lysozyme complement(2088941..2089555) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761035 YP_005233048.1 CDS STMMW_20111 NC_016854.1 2089558 2089902 R pfam_scan;Pfam:PF05106; E()=1.6E-33;score=114.2;query 3-105;description=Phage_holin_3; tmhmm; query 1-115; phage holin complement(2089558..2089902) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761036 YP_005233049.1 CDS STMMW_20121 NC_016854.1 2090064 2090498 D phage protein 2090064..2090498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761037 YP_005233050.1 CDS STMMW_20131 NC_016854.1 2090428 2090787 R phage protein complement(2090428..2090787) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761038 YP_005233051.1 CDS STMMW_20141 NC_016854.1 2090818 2091441 R none; phage protein complement(2090818..2091441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761039 YP_005233052.1 CDS STMMW_20151 NC_016854.1 2091452 2092441 R pfam_scan;Pfam:PF06147; E()=1.2E-76;score=256.0;query 129-326;description=DUF968; phage protein complement(2091452..2092441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761040 YP_005233053.1 CDS STMMW_20171 NC_016854.1 2092449 2093309 R none; pfam_scan;Pfam:PF04383; E()=1.3E-23;score=82.8;query8-127;description=KilA-N; phage protein complement(2092449..2093309) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761041 YP_005233054.1 CDS STMMW_20181 NC_016854.1 2093326 2093715 R pfam_scan;Pfam:PF05866; E()=1.2E-25;score=89.4;query5-120;description=RusA; crossover junction endodeoxyribonuclease rusa complement(2093326..2093715) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761042 YP_005233055.1 CDS STMMW_20191 NC_016854.1 2093712 2094605 R none; pfam_scan;Pfam:PF05869; E()=2.2E-66;score=222.0;query 15-205;description=Dam; putative phage-encoded DNA adenine-methylase complement(2093712..2094605) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761043 YP_005233056.1 CDS STMMW_20201 NC_016854.1 2094605 2095087 R none; pfam_scan;Pfam:PF06069; E()=1.4E-7;score=31.1;query 96-146;description=PerC; phage protein complement(2094605..2095087) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761044 YP_005233057.1 CDS STMMW_20211 NC_016854.1 2095089 2095907 R none; phage replication protein complement(2095089..2095907) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761045 YP_005233058.1 CDS STMMW_20212 NC_016854.1 2095904 2096128 R phage protein complement(2095904..2096128) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761046 YP_005233059.1 CDS STMMW_20221 NC_016854.1 2096125 2097282 R none; pfam_scan;Pfam:PF09669; E()=5.7E-30;score=103.1;query 220-312;description=Phage_pRha; pfam_scan;Pfam:PF10554; E()=5.4E-39;score=131.7;query 115-212;description=Phage_ASH; phage immunity protein complement(2096125..2097282) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761047 YP_005233060.1 CDS STMMW_20231 NC_016854.1 2097279 2097833 R none; phage protein complement(2097279..2097833) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761048 YP_005233061.1 CDS STMMW_20241 NC_016854.1 2098184 2098879 D none; pfam_scan;Pfam:PF00717; E()=1.7E-16;score=59.2;query141- 207;description=Peptidase_S24; pfam_scan;Pfam:PF01381; E()=1.7E-12;score=46.4;query7-62;description=HTH_3; phage encoded transcriptional regulator 2098184..2098879 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761049 YP_005233062.1 CDS STMMW_20251 NC_016854.1 2099532 2100065 D none; phage protein 2099532..2100065 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761050 YP_005233063.1 CDS STMMW_20261 NC_016854.1 2100123 2100950 D none; pfam_scan;Pfam:PF10065; E()=7.9E-97;score=323.2;query 1-274;description=DUF2303; phage protein 2100123..2100950 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761051 YP_005233064.1 CDS STMMW_20271 NC_016854.1 2101087 2101626 D phage protein 2101087..2101626 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761052 YP_005233065.1 CDS STMMW_20281 NC_016854.1 2101697 2101927 D phage protein 2101697..2101927 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761053 YP_005233066.1 CDS STMMW_20291 NC_016854.1 2101924 2102439 D pfam_scan;Pfam:PF03235; E()=3.9E-16;score=59.5;query37-99;description=DUF262; phage protein 2101924..2102439 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761054 YP_005233067.1 CDS STMMW_20301 NC_016854.1 2102436 2103053 D none; phage protein 2102436..2103053 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761055 YP_005233068.1 CDS STMMW_20311 NC_016854.1 2103050 2103883 D none; phage protein 2103050..2103883 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761056 YP_005233069.1 CDS STMMW_20321 NC_016854.1 2103887 2104456 D phage protein 2103887..2104456 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761057 YP_005233070.1 CDS STMMW_20331 NC_016854.1 2104481 2104723 D phage protein 2104481..2104723 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761058 YP_005233071.1 CDS STMMW_20341 NC_016854.1 2104725 2105714 D none; pfam_scan;Pfam:PF00589; E()=3.3E-8;score=33.3;query 180-317;description=Phage_integrase; phage integrase 2104725..2105714 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761059 YP_005233072.1 CDS STMMW_20351 NC_016854.1 2106006 2106803 D pfam_scan;Pfam:PF06167; E()=2.2E-75;score=252.6;query 6-243;description=MtfA; hypothetical protein 2106006..2106803 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761060 YP_005233073.1 CDS STMMW_20361 NC_016854.1 2108113 2108586 D hypothetical protein 2108113..2108586 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761061 YP_005233074.1 CDS STMMW_20371 NC_016854.1 2109061 2109759 D pfam_scan;Pfam:PF02899; E()=1.7E-4;score=21.3;query 10-88;description=Phage_integr_N; putative DNA-binding protein 2109061..2109759 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761062 YP_005233075.1 CDS STMMW_20381 NC_016854.1 2110333 2112270 D pfam_scan;Pfam:PF08238; E()=8.7E-5;score=22.1;query 524-557;description=Sel1; pfam_scan;Pfam:PF07661; E()=0.0021;score=17.3;query 134-151;description=MORN_2; hypothetical protein 2110333..2112270 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761063 YP_005233076.1 CDS STMMW_20391 NC_016854.1 2112327 2114057 D Signal peptide; signalp; query 1-23;cleavage_site_probability=0.547; 0.999; hypothetical protein 2112327..2114057 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761064 YP_005233077.1 CDS STMMW_20401 NC_016854.1 2114591 2114845 R hypothetical protein complement(2114591..2114845) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761065 YP_005233078.1 CDS STMMW_20411 NC_016854.1 2114962 2116416 R pfam_scan;Pfam:PF10423; E()=4.5E-49;score=165.4;query 11-168;description=AMNp_N; pfam_scan;Pfam:PF01048; E()=2.9E-22;score=78.6;query261-429;description=PNP_UDP_1; AMP nucleosidase complement(2114962..2116416) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761066 YP_005233079.1 CDS STMMW_20421 NC_016854.1 2116462 2116623 D hypothetical protein 2116462..2116623 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761067 YP_005233080.1 CDS STMMW_20431 NC_016854.1 2116612 2116938 R pfam_scan;Pfam:PF07377; E()=1.4E-38;score=131.0;query 1-108;description=DUF1493; hypothetical protein complement(2116612..2116938) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761068 YP_005233081.1 CDS STMMW_20441 NC_016854.1 2116932 2117318 R hypothetical protein complement(2116932..2117318) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761069 YP_005233082.1 CDS STMMW_20451 NC_016854.1 2118032 2119489 R pfam_scan;Pfam:PF01554; E()=2.3E-36;score=124.8;query 47-208;description=MatE; tmhmm; query 1-486; putative inner membrane protein complement(2118032..2119489) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761070 YP_005233083.1 CDS STMMW_20461 NC_016854.1 2119951 2120880 R pfam_scan;Pfam:PF03734; E()=1.4E-20;score=73.3;query97-230;description=YkuD; tmhmm; query 1-310; hypothetical protein complement(2119951..2120880) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761071 YP_005233084.1 CDS STMMW_20471 NC_016854.1 2120958 2122028 R pfam_scan;Pfam:PF02277; E()=5.0E-125;score=416.5;query 8-346;description=DBI_PRT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2120958..2122028) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761072 YP_005233085.1 CDS STMMW_20481 NC_016854.1 2122055 2122798 R pfam_scan;Pfam:PF02654; E()=2.1E-72;score=243.2;query 5-246;description=CobS; tmhmm; query 1-248; cobalamin (5'-phosphate) synthase complement(2122055..2122798) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761073 YP_005233086.1 CDS STMMW_20491 NC_016854.1 2122795 2123340 R pfam_scan;Pfam:PF02283; E()=2.8E-61;score=205.6;query 3-180;description=CobU; cobinamide kinase and guanylyltransferase complement(2122795..2123340) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761074 YP_005233087.1 CDS STMMW_20501 NC_016854.1 2123337 2124857 R pfam_scan;Pfam:PF07685; E()=2.0E-49;score=166.7;query 285-448;description=GATase_3; pfam_scan;Pfam:PF01656; E()=1.9E-49;score=168.2;query 5-238;description=CbiA; putative cobyric acid synthase complement(2123337..2124857) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761075 YP_005233088.1 CDS STMMW_20511 NC_016854.1 2124854 2125669 R pfam_scan;Pfam:PF00005; E()=8.4E-45;score=152.9;query 29-197;description=ABC_tran; putative cobalt transport ATP-binding protein complement(2124854..2125669) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761076 YP_005233089.1 CDS STMMW_20521 NC_016854.1 2125678 2126355 R pfam_scan;Pfam:PF02361; E()=2.4E-54;score=183.4;query 10-221;description=CbiQ; tmhmm; query 1-226; putative cobalt transport protein complement(2125678..2126355) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761077 YP_005233090.1 CDS STMMW_20531 NC_016854.1 2126342 2126623 R pfam_scan;Pfam:PF02553; E()=2.2E-28;score=97.6;query2-69;description=CbiN; tmhmm; query 1-94; putative cobalt transport protein CbiN complement(2126342..2126623) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761078 YP_005233091.1 CDS STMMW_20541 NC_016854.1 2126625 2127377 R pfam_scan;Pfam:PF01891; E()=4.0E-76;score=254.3;query 58-243;description=CbiM; tmhmm; query 1-251; cobalamin biosynthesis protein complement(2126625..2127377) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761079 YP_005233092.1 CDS STMMW_20551 NC_016854.1 2127359 2128072 R pfam_scan;Pfam:PF00590; E()=7.2E-37;score=126.5;query 4-210;description=TP_methylase; cobalt-precorrin-2 C(20)-methyltransferase complement(2127359..2128072) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761080 YP_005233093.1 CDS STMMW_20561 NC_016854.1 2128069 2128863 R pfam_scan;Pfam:PF06180; E()=2.1E-108;score=360.8;query 3-256;description=CbiK; sirohydrochlorin cobaltochelatase complement(2128069..2128863) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761081 YP_005233094.1 CDS STMMW_20571 NC_016854.1 2128866 2129657 R pfam_scan;Pfam:PF02571; E()=3.1E-56;score=190.0;query 5-254;description=CbiJ; cobalt-precorrin-6a reductase complement(2128866..2129657) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761082 YP_005233095.1 CDS STMMW_20581 NC_016854.1 2129654 2130379 R pfam_scan;Pfam:PF00590; E()=1.6E-37;score=128.6;query 1-208;description=TP_methylase; precorrin-3 C17-methyltransferase complement(2129654..2130379) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761083 YP_005233096.1 CDS STMMW_20591 NC_016854.1 2130379 2131434 R pfam_scan;Pfam:PF11761; E()=5.6E-10;score=38.9;query140-228;description=CbiG_mid; pfam_scan;Pfam:PF01890; E()=9.1E-30;score=102.8;query 231-348;description=CbiG_C; pfam_scan;Pfam:PF11760; E()=1.3E-34;score=117.1;query 52-134;description=CbiG_N; tmhmm; query 1-352; cobalamin biosynthesis protein complement(2130379..2131434) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761084 YP_005233097.1 CDS STMMW_20601 NC_016854.1 2131415 2132188 R pfam_scan;Pfam:PF00590; E()=2.0E-47;score=161.0;query 10-215;description=TP_methylase; precorrin-4 C(11)-methyltransferase complement(2131415..2132188) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761085 YP_005233098.1 CDS STMMW_20611 NC_016854.1 2132172 2132750 R pfam_scan;Pfam:PF05175; E()=1.1E-9;score=37.6;query 23-141;description=MTS; precorrin-8W decarboxylase complement(2132172..2132750) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761086 YP_005233099.1 CDS STMMW_20621 NC_016854.1 2132740 2133345 R pfam_scan;Pfam:PF00590; E()=2.5E-42;score=144.3;query 1-183;description=TP_methylase; precorrin-6Y C5,15-methyltransferase complement(2132740..2133345) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761087 YP_005233100.1 CDS STMMW_20631 NC_016854.1 2133339 2134478 R pfam_scan;Pfam:PF01888; E()=8.9E-114;score=378.8;query 15-273;description=CbiD; Putative cobalt-precorrin-6A synthase complement(2133339..2134478) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761088 YP_005233101.1 CDS STMMW_20641 NC_016854.1 2134478 2135110 R pfam_scan;Pfam:PF02570; E()=1.6E-65;score=220.2;query 10-206;description=CbiC; precorrin-8X methylmutase complement(2134478..2135110) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761089 YP_005233102.1 CDS STMMW_20651 NC_016854.1 2135121 2136080 R pfam_scan;Pfam:PF03186; E()=1.4E-119;score=398.0;query 4-300;description=CobD_Cbib; tmhmm; query 1-320; cobalamin biosynthesis protein complement(2135121..2136080) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761090 YP_005233103.1 CDS STMMW_20661 NC_016854.1 2136077 2137456 R pfam_scan;Pfam:PF07685; E()=2.5E-31;score=108.0;query 289-445;description=GATase_3; pfam_scan;Pfam:PF01656; E()=5.9E-36;score=124.1;query 9-197;description=CbiA; cobyrinic acid A,C-diamide synthase complement(2136077..2137456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761091 YP_005233104.1 CDS STMMW_20671 NC_016854.1 2138054 2138965 R pfam_scan;Pfam:PF10114; E()=1.5E-44;score=151.0;query 6-169;description=Hist_Kin_Sens; pfam_scan;Pfam:PF00165; E()=5.1E-11;score=41.9;query201-241;description=HTH_AraC; pdu/cob regulatory protein PocR complement(2138054..2138965) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761092 YP_005233105.1 CDS STMMW_20681 NC_016854.1 2139182 2139976 R pfam_scan;Pfam:PF00230; E()=1.9E-58;score=197.2;query 7-249;description=MIP; tmhmm; query 1-265; propanediol diffusion facilitator complement(2139182..2139976) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761093 YP_005233106.1 CDS STMMW_20691 NC_016854.1 2140501 2140785 D pfam_scan;Pfam:PF00936; E()=1.8E-26;score=91.4;query4-80;description=BMC; putative propanediol utilization protein 2140501..2140785 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761094 YP_005233107.1 CDS STMMW_20701 NC_016854.1 2140893 2141594 D pfam_scan;Pfam:PF00936; E()=4.0E-10;score=39.2;query43-114;description=BMC; putative propanediol utilization protein PduB 2140893..2141594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761095 YP_005233108.1 CDS STMMW_20711 NC_016854.1 2141613 2143277 D pfam_scan;Pfam:PF02286; E()=0.0;score=1039.5;query 1-553;description=Dehydratase_LU; glycerol dehydratase large subunit 2141613..2143277 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761096 YP_005233109.1 CDS STMMW_20721 NC_016854.1 2143288 2143962 D pfam_scan;Pfam:PF02288; E()=4.5E-88;score=292.7;query 48-222;description=Dehydratase_MU; diol dehydratase medium subunit 2143288..2143962 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761097 YP_005233110.1 CDS STMMW_20731 NC_016854.1 2143977 2144498 D pfam_scan;Pfam:PF02287; E()=2.0E-67;score=224.9;query 36-170;description=Dehydratase_SU; diol dehydratase small subunit 2143977..2144498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761098 YP_005233111.1 CDS STMMW_20741 NC_016854.1 2144508 2146340 D pfam_scan;Pfam:PF08841; E()=3.7E-175;score=581.2;query 274-605;description=DDR; propanediol utilization protein 2144508..2146340 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761099 YP_005233112.1 CDS STMMW_20751 NC_016854.1 2146330 2146680 D propanediol utilization protein 2146330..2146680 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761100 YP_005233113.1 CDS STMMW_20761 NC_016854.1 2146978 2147460 D pfam_scan;Pfam:PF00936; E()=5.4E-21;score=73.9;query10-87;description=BMC; tmhmm; query 1-161; propanediol utilization protein 2146978..2147460 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761101 YP_005233114.1 CDS STMMW_20771 NC_016854.1 2147460 2148092 D pfam_scan;Pfam:PF06130; E()=2.1E-22;score=78.4;query22-101;description=PduL; propanediol utilization protein 2147460..2148092 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761102 YP_005233115.1 CDS STMMW_20781 NC_016854.1 2148089 2148580 D propanediol utilization protein 2148089..2148580 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761103 YP_005233116.1 CDS STMMW_20791 NC_016854.1 2148584 2148859 D pfam_scan;Pfam:PF03319; E()=1.7E-27;score=94.8;query1-87;description=EutN_CcmL; propanediol utilization protein 2148584..2148859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761104 YP_005233117.1 CDS STMMW_20801 NC_016854.1 2148869 2149879 D pfam_scan;Pfam:PF03928; E()=8.3E-41;score=138.9;query 200-330;description=DUF336; pfam_scan;Pfam:PF01923; E()=3.3E-59;score=199.1;query 3-166;description=Cob_adeno_trans; propanediol utilization protein 2148869..2149879 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761105 YP_005233118.1 CDS STMMW_20811 NC_016854.1 2149876 2151270 D pfam_scan;Pfam:PF00171; E()=2.8E-29;score=101.3;query 36-418;description=Aldedh; putative CoA-dependent proprionaldehyde dehydrogenase 2149876..2151270 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761106 YP_005233119.1 CDS STMMW_20821 NC_016854.1 2151282 2152394 D pfam_scan;Pfam:PF00465; E()=2.0E-110;score=368.6;query 8-362;description=Fe-ADH; putative propanol dehydrogenase 2151282..2152394 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761107 YP_005233120.1 CDS STMMW_20831 NC_016854.1 2152391 2153746 D pfam_scan;Pfam:PF10531; E()=1.2E-11;score=43.9;query174-219;description=SLBB; pfam_scan;Pfam:PF01512; E()=3.1E-42;score=143.7;query 21-160;description=Complex1_51K; propanediol utilization ferredoxin 2152391..2153746 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761108 YP_005233121.1 CDS STMMW_20841 NC_016854.1 2153749 2154303 D pfam_scan;Pfam:PF00936; E()=4.8E-22;score=77.3;query3-76;description=BMC; putative propanediol utilization protein 2153749..2154303 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761109 YP_005233122.1 CDS STMMW_20851 NC_016854.1 2154303 2154653 D pfam_scan;Pfam:PF00936; E()=3.9E-17;score=61.6;query45-111;description=BMC; putative propanediol utilization protein PduU 2154303..2154653 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761110 YP_005233123.1 CDS STMMW_20861 NC_016854.1 2154658 2155110 D pfam_scan;Pfam:PF10662; E()=4.8E-59;score=197.6;query 1-141;description=PduV-EutP; putative propanediol utilization protein PduV 2154658..2155110 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761111 YP_005233124.1 CDS STMMW_20871 NC_016854.1 2155095 2156309 D pfam_scan;Pfam:PF00871; E()=3.7E-149;score=496.3;query 4-387;description=Acetate_kinase; Acetokinase 2155095..2156309 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761112 YP_005233125.1 CDS STMMW_20881 NC_016854.1 2156367 2157269 D pfam_scan;Pfam:PF00288; E()=2.4E-11;score=42.9;query85- 132;description=GHMP_kinases_N; putative propanediol utilization protein 2156367..2157269 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761113 YP_005233126.1 CDS STMMW_20891 NC_016854.1 2157303 2157638 R pfam_scan;Pfam:PF04363; E()=7.6E-46;score=153.6;query 8-100;description=DUF496; hypothetical protein complement(2157303..2157638) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761114 YP_005233127.1 CDS STMMW_20901 NC_016854.1 2157883 2158941 R pfam_scan;Pfam:PF04632; E()=5.6E-19;score=67.7;query20-337;description=FUSC; tmhmm; query 1-353; hypothetical protein complement(2157883..2158941) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761115 YP_005233128.1 CDS STMMW_20911 NC_016854.1 2159060 2159527 R pfam_scan;Pfam:PF06445; E()=1.4E-23;score=83.0;query1-153;description=AraC_E_bind; DNA gyrase inhibitory protein complement(2159060..2159527) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761116 YP_005233129.1 CDS STMMW_20921 NC_016854.1 2159680 2160852 R pfam_scan;Pfam:PF00768; E()=5.2E-98;score=327.0;query 29-264;description=Peptidase_S11; pfam_scan;Pfam:PF07943; E()=1.2E-25;score=89.1;query284-375;description=PBP5_C; penicillin-binding protein complement(2159680..2160852) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761117 YP_005233130.1 CDS STMMW_20931 NC_016854.1 2160976 2161740 R pfam_scan;Pfam:PF01292; E()=3.9E-23;score=81.6;query58- 239;description=Ni_hydr_CYTB; tmhmm; query 1-255; thiosulfate reductase cytochrome b subunit complement(2160976..2161740) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761118 YP_005233131.1 CDS STMMW_20941 NC_016854.1 2161737 2162315 R pfam_scan;Pfam:PF00037; E()=2.8E-7;score=29.2;query 89-110;description=Fer4; thiosulfate reductase electron transport protein PhsB complement(2161737..2162315) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761119 YP_005233132.1 CDS STMMW_20951 NC_016854.1 2162330 2164606 R pfam_scan;Pfam:PF00384; E()=4.8E-70;score=236.0;query 98-524;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=1.9E-12;score=46.4;query42- 94;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=1.8E-19;score=68.9;query637- 745;description=Molydop_binding; thiosulfate reductase complement(2162330..2164606) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761120 YP_005233133.1 CDS STMMW_20962 NC_016854.1 2165053 2165349 R hypothetical protein complement(2165053..2165349) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761122 YP_005233134.1 CDS STMMW_20971 NC_016854.1 2165225 2167573 D secreted protein SopA 2165225..2167573 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761123 YP_005233135.1 CDS STMMW_20981 NC_016854.1 2167916 2169346 D pfam_scan;Pfam:PF00929; E()=1.3E-22;score=80.1;query12-193;description=Exonuc_X-T; pfam_scan;Pfam:PF08411; E()=1.7E-109;score=364.8;query 213-474;description=Exonuc_X-T_C; exodeoxyribonuclease I 2167916..2169346 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761124 YP_005233136.1 CDS STMMW_20991 NC_016854.1 2169482 2170846 R pfam_scan;Pfam:PF00324; E()=2.8E-39;score=134.3;query 25-415;description=AA_permease; tmhmm; query 1-455; putative amino acid transporter protein complement(2169482..2170846) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761125 YP_005233137.1 CDS STMMW_21001 NC_016854.1 2171126 2172040 R pfam_scan;Pfam:PF00126; E()=4.1E-12;score=45.5;query8-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.0E-26;score=90.4;query89- 290;description=LysR_substrate; putative transcriptional regulator complement(2171126..2172040) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761126 YP_005233138.1 CDS STMMW_21011 NC_016854.1 2172086 2172910 R pfam_scan;Pfam:PF01370; E()=9.1E-9;score=34.7;query 10-213;description=Epimerase; hypothetical protein complement(2172086..2172910) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761127 YP_005233139.1 CDS STMMW_21021 NC_016854.1 2173270 2174169 D pfam_scan;Pfam:PF08029; E()=5.3E-26;score=89.7;query222-297;description=HisG_C; pfam_scan;Pfam:PF01634; E()=6.0E-54;score=181.5;query 53-221;description=HisG; ATP phosphoribosyltransferase 2173270..2174169 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761128 YP_005233140.1 CDS STMMW_21031 NC_016854.1 2174272 2175576 D pfam_scan;Pfam:PF00815; E()=1.3E-179;score=596.9;query 18-428;description=Histidinol_dh; histidinol dehydrogenase 2174272..2175576 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761129 YP_005233141.1 CDS STMMW_21041 NC_016854.1 2175573 2176652 D pfam_scan;Pfam:PF00155; E()=6.0E-73;score=245.5;query 49-354;description=Aminotran_1_2; histidinol-phosphate aminotransferase (imidazole) 2175573..2176652 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761130 YP_005233142.1 CDS STMMW_21051 NC_016854.1 2176649 2177716 D pfam_scan;Pfam:PF00475; E()=1.5E-62;score=209.5;query 196-338;description=IGPD; pfam_scan;Pfam:PF08645; E()=2.3E-6;score=27.2;query 7-133;description=PNK3P; histidinol phosphatase); bifunctional histidine biosynthesis protein (imidazoleglycerol-phosphate dehydratase 2176649..2177716 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761131 YP_005233143.1 CDS STMMW_21061 NC_016854.1 2177713 2178306 D pfam_scan;Pfam:PF00117; E()=1.7E-30;score=105.5;query 5-196;description=GATase; imidazole glycerol phosphate synthase subunit hish; amidotransferase 2177713..2178306 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761132 YP_005233144.1 CDS STMMW_21071 NC_016854.1 2178306 2179043 D pfam_scan;Pfam:PF00977; E()=4.8E-77;score=257.6;query 1-234;description=His_biosynth; 1-5-phosphoribosyl-5-[5-phosphoribosylaminometh yl ideneamino] imidazole-4-carboxamide isomerase 2178306..2179043 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761133 YP_005233145.1 CDS STMMW_21081 NC_016854.1 2179025 2179801 D pfam_scan;Pfam:PF00977; E()=7.5E-80;score=266.8;query 5-239;description=His_biosynth; imidazole glycerol phosphate synthase subunit hisf 2179025..2179801 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761134 YP_005233146.1 CDS STMMW_21091 NC_016854.1 2179795 2180406 D pfam_scan;Pfam:PF01503; E()=1.8E-17;score=62.5;query116-202;description=PRA-PH; pfam_scan;Pfam:PF01502; E()=1.4E-32;score=110.7;query 33-106;description=PRA-CH; bifunctional histidine biosynthesis bifunctional protein (phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase) 2179795..2180406 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761135 YP_005233147.1 CDS STMMW_21101 NC_016854.1 2180487 2181470 R pfam_scan;Pfam:PF02706; E()=1.5E-17;score=63.8;query16-153;description=Wzz; polysaccharide chain length regulator complement(2180487..2181470) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761136 YP_005233148.1 CDS STMMW_21111 NC_016854.1 2181613 2182779 R pfam_scan;Pfam:PF00984; E()=4.4E-27;score=93.4;query191- 281;description=UDPG_MGDP_dh; pfam_scan;Pfam:PF03720; E()=3.8E-6;score=26.9;query 301-371;description=UDPG_MGDP_dh_C; pfam_scan;Pfam:PF03721; E()=3.9E-39;score=133.9;query 1-173;description=UDPG_MGDP_dh_N; UDP-glucose 6-dehydrogenase complement(2181613..2182779) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761137 YP_005233149.1 CDS STMMW_21121 NC_016854.1 2183016 2184422 R pfam_scan;Pfam:PF00393; E()=1.7E-142;score=473.4;query 179-466;description=6PGD; pfam_scan;Pfam:PF03446; E()=4.0E-53;score=179.0;query 3-174;description=NAD_binding_2; 6-phosphogluconate dehydrogenase complement(2183016..2184422) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761138 YP_005233150.1 CDS STMMW_21131 NC_016854.1 2184586 2186016 R pfam_scan;Pfam:PF02397; E()=3.1E-68;score=228.3;query 280-476;description=Bac_transf; tmhmm; query 1-477; undecaprenyl-phosphate galactosephosphotransferase complement(2184586..2186016) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761139 YP_005233151.1 CDS STMMW_21141 NC_016854.1 2186088 2187521 R pfam_scan;Pfam:PF00408; E()=4.8E-7;score=29.3;query 420-471;description=PGM_PMM_IV; pfam_scan;Pfam:PF02878; E()=1.0E-31;score=109.1;query 16-139;description=PGM_PMM_I; pfam_scan;Pfam:PF02879; E()=2.2E-9;score=37.0;query 161-258;description=PGM_PMM_II; phosphomannomutase complement(2186088..2187521) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761140 YP_005233152.1 CDS STMMW_21151 NC_016854.1 2187508 2188947 R pfam_scan;Pfam:PF00483; E()=7.5E-83;score=277.3;query 5-288;description=NTP_transferase; pfam_scan;Pfam:PF01050; E()=3.9E-79;score=263.6;query 301-465;description=MannoseP_isomer; mannose-1-phosphate guanylyltransferase complement(2187508..2188947) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761141 YP_005233153.1 CDS STMMW_21161 NC_016854.1 2188948 2189892 R pfam_scan;Pfam:PF00535; E()=2.0E-25;score=88.8;query5- 172;description=Glycos_transf_2; putative rhamnosyltransferase complement(2188948..2189892) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761142 YP_005233154.1 CDS STMMW_21171 NC_016854.1 2189893 2190954 R pfam_scan;Pfam:PF00534; E()=9.2E-31;score=106.3;query 177-330;description=Glycos_transf_1; putative glycosyltransferase complement(2189893..2190954) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761143 YP_005233155.1 CDS STMMW_21181 NC_016854.1 2191274 2192275 R pfam_scan;Pfam:PF00535; E()=3.3E-30;score=104.4;query 4-149;description=Glycos_transf_2; putative glycosyltransferase complement(2191274..2192275) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761144 YP_005233156.1 CDS STMMW_21191 NC_016854.1 2192280 2193572 R pfam_scan;Pfam:PF01943; E()=1.3E-7;score=30.6;query 19-292;description=Polysacc_synt; tmhmm; query 1-431; putative O-antigen transporter complement(2192280..2193572) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761145 YP_005233157.1 CDS STMMW_21201 NC_016854.1 2193654 2194553 R pfam_scan;Pfam:PF01370; E()=3.5E-39;score=134.2;query 8-229;description=Epimerase; CDP-abequose synthase complement(2193654..2194553) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761146 YP_005233158.1 CDS STMMW_21211 NC_016854.1 2194581 2195894 R pfam_scan;Pfam:PF01041; E()=1.5E-114;score=382.5;query 41-429;description=DegT_DnrJ_EryC1; putative dehydratase RfbH complement(2194581..2195894) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761147 YP_005233159.1 CDS STMMW_21221 NC_016854.1 2195921 2197000 R pfam_scan;Pfam:PF01370; E()=3.4E-27;score=95.0;query12-247;description=Epimerase; CDP-glucose 4,6-dehydratase complement(2195921..2197000) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761148 YP_005233160.1 CDS STMMW_21231 NC_016854.1 2197005 2197778 R pfam_scan;Pfam:PF00483; E()=9.8E-19;score=67.3;query2- 212;description=NTP_transferase; glucose-1-phosphate cytidylyltransferase complement(2197005..2197778) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761149 YP_005233161.1 CDS STMMW_21241 NC_016854.1 2197775 2198767 R pfam_scan;Pfam:PF00175; E()=2.1E-25;score=88.7;query200- 302;description=NAD_binding_1; pfam_scan;Pfam:PF00111; E()=1.8E-13;score=49.6;query7-76;description=Fer2; pfam_scan;Pfam:PF00970; E()=2.9E-20;score=71.7;query99- 189;description=FAD_binding_6; putative reductase RfbI complement(2197775..2198767) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761150 YP_005233162.1 CDS STMMW_21251 NC_016854.1 2198773 2199324 R pfam_scan;Pfam:PF00908; E()=2.2E-80;score=267.7;query 4-178;description=dTDP_sugar_isom; dTDP-4-dehydrorhamnose 3,5-epimerase complement(2198773..2199324) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761151 YP_005233163.1 CDS STMMW_21261 NC_016854.1 2199325 2200203 R pfam_scan;Pfam:PF00483; E()=3.4E-84;score=281.7;query 5-242;description=NTP_transferase; TDP-glucose pyrophosphorylase complement(2199325..2200203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761152 YP_005233164.1 CDS STMMW_21271 NC_016854.1 2200251 2201150 R pfam_scan;Pfam:PF04321; E()=1.9E-111;score=371.3;query 1-293;description=RmlD_sub_bind; dTDP-4-dehydrorhamnose reductase complement(2200251..2201150) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761153 YP_005233165.1 CDS STMMW_21281 NC_016854.1 2201150 2202235 R pfam_scan;Pfam:PF01370; E()=4.3E-73;score=245.2;query 3-259;description=Epimerase; dTDP-glucose 4,6-dehydratase complement(2201150..2202235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761154 YP_005233166.1 CDS STMMW_21291 NC_016854.1 2202612 2203505 R pfam_scan;Pfam:PF00483; E()=1.2E-24;score=86.7;query5- 273;description=NTP_transferase; UTP-glucose-1-phosphate uridylyltransferase complement(2202612..2203505) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761155 YP_005233167.1 CDS STMMW_21301 NC_016854.1 2203683 2205086 R Signal peptide; signalp; query 1-32;cleavage_site_probability=0.968; 1.000; hypothetical protein complement(2203683..2205086) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761156 YP_005233168.1 CDS STMMW_21311 NC_016854.1 2205097 2206317 R pfam_scan;Pfam:PF00534; E()=3.6E-39;score=133.7;query 219-384;description=Glycos_transf_1; putative glycosyltransferase complement(2205097..2206317) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761157 YP_005233169.1 CDS STMMW_21321 NC_016854.1 2206314 2207594 R pfam_scan;Pfam:PF04230; E()=5.4E-36;score=124.1;query 13-356;description=PS_pyruv_trans; colanic acid biosynthesis protein complement(2206314..2207594) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761158 YP_005233170.1 CDS STMMW_21331 NC_016854.1 2207616 2209094 R pfam_scan;Pfam:PF01943; E()=3.9E-60;score=202.8;query 11-276;description=Polysacc_synt; tmhmm; query 1-493; putative transmembrane transport protein complement(2207616..2209094) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761159 YP_005233171.1 CDS STMMW_21341 NC_016854.1 2209227 2210621 R pfam_scan;Pfam:PF02397; E()=2.1E-77;score=258.2;query 274-464;description=Bac_transf; tmhmm; query 1-465; putative extracellular polysaccharide biosynthesis protein complement(2209227..2210621) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761160 YP_005233172.1 CDS STMMW_21351 NC_016854.1 2210675 2212045 R pfam_scan;Pfam:PF00408; E()=1.2E-12;score=47.2;query378- 454;description=PGM_PMM_IV; pfam_scan;Pfam:PF02880; E()=8.4E-27;score=93.0;query263- 372;description=PGM_PMM_III; pfam_scan;Pfam:PF02878; E()=4.0E-36;score=123.4;query 6-134;description=PGM_PMM_I; pfam_scan;Pfam:PF02879; E()=9.2E-25;score=86.4;query153- 258;description=PGM_PMM_II; phosphomannomutase complement(2210675..2212045) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761161 YP_005233173.1 CDS STMMW_21361 NC_016854.1 2212156 2213598 R pfam_scan;Pfam:PF00483; E()=2.1E-79;score=266.0;query 10-295;description=NTP_transferase; pfam_scan;Pfam:PF01050; E()=4.1E-85;score=283.0;query 309-475;description=MannoseP_isomer; mannose-1-phosphate guanylyltransferase complement(2212156..2213598) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761162 YP_005233174.1 CDS STMMW_21371 NC_016854.1 2213595 2214818 R pfam_scan;Pfam:PF00534; E()=1.5E-16;score=60.0;query220- 389;description=Glycos_transf_1; putative glycosyltransferase complement(2213595..2214818) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761163 YP_005233175.1 CDS STMMW_21381 NC_016854.1 2214815 2215288 R pfam_scan;Pfam:PF00293; E()=1.1E-21;score=76.7;query21-145;description=NUDIX; putative O-antigen biosynthesis protein complement(2214815..2215288) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761164 YP_005233176.1 CDS STMMW_21401 NC_016854.1 2215291 2216256 R pfam_scan;Pfam:PF01370; E()=3.9E-66;score=222.4;query 6-229;description=Epimerase; GDP-fucose synthetase complement(2215291..2216256) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761165 YP_005233177.1 CDS STMMW_21411 NC_016854.1 2216259 2217380 R pfam_scan;Pfam:PF01370; E()=5.7E-79;score=264.4;query 5-252;description=Epimerase; GDP-mannose 4,6-dehydratase complement(2216259..2217380) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761166 YP_005233178.1 CDS STMMW_21421 NC_016854.1 2217404 2217958 R acetyltransferase complement(2217404..2217958) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761167 YP_005233179.1 CDS STMMW_21431 NC_016854.1 2217974 2218720 R pfam_scan;Pfam:PF00535; E()=2.7E-18;score=65.6;query4- 138;description=Glycos_transf_2; glycosyltransferase complement(2217974..2218720) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761168 YP_005233180.1 CDS STMMW_21441 NC_016854.1 2218733 2219947 R tmhmm; query 1-405; colanic acid polymerase complement(2218733..2219947) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761169 YP_005233181.1 CDS STMMW_21451 NC_016854.1 2219922 2221139 R pfam_scan;Pfam:PF00534; E()=1.4E-7;score=30.8;query 286-358;description=Glycos_transf_1; glycosyltransferase complement(2219922..2221139) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761170 YP_005233182.1 CDS STMMW_21461 NC_016854.1 2221136 2221624 R putative acetyltransferase complement(2221136..2221624) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761171 YP_005233183.1 CDS STMMW_21471 NC_016854.1 2221627 2222469 R pfam_scan;Pfam:PF00535; E()=1.1E-29;score=102.7;query 9-166;description=Glycos_transf_2; colanic acid biosynthesis glycosyl transferase complement(2221627..2222469) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761172 YP_005233184.1 CDS STMMW_21481 NC_016854.1 2222556 2224715 R pfam_scan;Pfam:PF02706; E()=2.1E-36;score=124.8;query 15-251;description=Wzz; pfam_scan;Pfam:PF01656; E()=7.8E-11;score=41.8;query536-698;description=CbiA; tmhmm; query 1-720; tyrosine-protein kinase complement(2222556..2224715) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761173 YP_005233185.1 CDS STMMW_21491 NC_016854.1 2224712 2225161 R pfam_scan;Pfam:PF01451; E()=7.3E-48;score=161.8;query 3-140;description=LMWPc; putative protein-tyrosine phosphatase complement(2224712..2225161) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761174 YP_005233186.1 CDS STMMW_21501 NC_016854.1 2225167 2226222 R pfam_scan;Pfam:PF02563; E()=3.1E-25;score=87.3;query49- 138;description=Poly_export; pfam_scan;Pfam:PF10531; E()=1.6E-5;score=24.4;query 145-191;description=SLBB; putative polysaccharide export protein complement(2225167..2226222) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761175 YP_005233187.1 CDS STMMW_21511 NC_016854.1 2226981 2228561 D pfam_scan;Pfam:PF03741; E()=5.1E-45;score=152.9;query 14-203;description=TerC; pfam_scan;Pfam:PF00571; E()=4.8E-18;score=65.0;query306-421;description=CBS; pfam_scan;Pfam:PF03471; E()=1.7E-19;score=68.8;query439-516;description=CorC_HlyC; tmhmm; query 1-527; hypothetical protein 2226981..2228561 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761176 YP_005233188.1 CDS STMMW_21521 NC_016854.1 2228647 2230503 R pfam_scan;Pfam:PF05170; E()=6.4E-61;score=206.1;query 1-242;description=AsmA; tmhmm; query 1-619; putative outer membrane assembly protein complement(2228647..2230503) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761177 YP_005233189.1 CDS STMMW_21531 NC_016854.1 2230542 2231123 R pfam_scan;Pfam:PF06559; E()=1.3E-7;score=30.3;query 3-125;description=DCD; dCTP deaminase. deoxycytidine triphosphate deaminase EC 3.5.4.13; dCTP deaminase complement(2230542..2231123) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761178 YP_005233190.1 CDS STMMW_21541 NC_016854.1 2231214 2231855 R pfam_scan;Pfam:PF00485; E()=4.0E-46;score=156.6;query 10-199;description=PRK; Uridine monophosphokinase; uridine kinase; Cytidine monophosphokinase complement(2231214..2231855) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761179 YP_005233191.1 CDS STMMW_21551 NC_016854.1 2232186 2235176 D pfam_scan;Pfam:PF08448; E()=3.6E-10;score=39.6;query449-560;description=PAS_4; pfam_scan;Pfam:PF08447; E()=7.3E-9;score=35.1;query 326-408;description=PAS_3; pfam_scan;Pfam:PF00563; E()=2.8E-24;score=85.5;query779-980;description=EAL; pfam_scan;Pfam:PF00990; E()=2.0E-47;score=160.4;query 570-727;description=GGDEF; pfam_scan;Pfam:PF05231; E()=2.5E-43;score=148.0;query 19-295;description=MASE1; tmhmm; query 1-997; hypothetical protein 2232186..2235176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761180 YP_005233192.1 CDS STMMW_21561 NC_016854.1 2235144 2236013 R pfam_scan;Pfam:PF00730; E()=1.6E-13;score=50.2;query118-262;description=HhH-GPD; pfam_scan;Pfam:PF06029; E()=7.3E-35;score=119.2;query 2-112;description=AlkA_N; DNA-3-methyladenine glycosidase II complement(2235144..2236013) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761181 YP_005233193.1 CDS STMMW_21571 NC_016854.1 2236147 2237499 D pfam_scan;Pfam:PF00012; E()=5.3E-16;score=57.5;query3-228;description=HSP70; hypothetical protein 2236147..2237499 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761182 YP_005233194.1 CDS STMMW_21581 NC_016854.1 2237940 2239181 D pfam_scan;Pfam:PF00529; E()=4.0E-31;score=108.3;query 85-374;description=HlyD; tmhmm; query 1-414; putative efflux system protein 2237940..2239181 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761183 YP_005233195.1 CDS STMMW_21591 NC_016854.1 2239181 2242303 D pfam_scan;Pfam:PF00873; E()=0.0;score=1201.5;query 13-1022;description=ACR_tran; tmhmm; query 1-1041; putative RND family transporter protein 2239181..2242303 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761184 YP_005233196.1 CDS STMMW_21601 NC_016854.1 2242304 2245384 D pfam_scan;Pfam:PF00873; E()=0.0;score=1190.6;query 4-1008;description=ACR_tran; tmhmm; query 1-1027; putative RND family transporter protein 2242304..2245384 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761185 YP_005233197.1 CDS STMMW_21611 NC_016854.1 2245381 2246793 D pfam_scan;Pfam:PF07690; E()=1.3E-46;score=159.2;query 15-405;description=MFS_1; tmhmm; query 1-471; putative transporter protein 2245381..2246793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761186 YP_005233198.1 CDS STMMW_21621 NC_016854.1 2246793 2248196 D pfam_scan;Pfam:PF00672; E()=1.4E-17;score=62.8;query168-235;description=HAMP; pfam_scan;Pfam:PF02518; E()=2.3E-28;score=97.7;query349-459;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=2.1E-13;score=49.5;query240-304;description=HisKA; tmhmm; query 1-468; putative two-component system sensor kinase 2246793..2248196 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761187 YP_005233199.1 CDS STMMW_21631 NC_016854.1 2248193 2248915 D pfam_scan;Pfam:PF00486; E()=7.9E-24;score=82.4;query156- 232;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=1.8E-25;score=88.8;query13- 122;description=Response_reg; putative two-component system response regulator 2248193..2248915 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761188 YP_005233200.1 CDS STMMW_21641 NC_016854.1 2249184 2250386 D hypothetical protein 2249184..2250386 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761189 YP_005233201.1 CDS STMMW_21651 NC_016854.1 2250386 2251102 D pfam_scan;Pfam:PF06889; E()=4.7E-5;score=22.2;query 138-203;description=DUF1266; hypothetical protein 2250386..2251102 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761190 YP_005233202.1 CDS STMMW_21661 NC_016854.1 2251113 2253224 D hypothetical protein 2251113..2253224 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761191 YP_005233203.1 CDS STMMW_21671 NC_016854.1 2253340 2254701 D pfam_scan;Pfam:PF01136; E()=8.1E-88;score=293.3;query 77-343;description=Peptidase_U32; putative protease 2253340..2254701 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761192 YP_005233204.1 CDS STMMW_21681 NC_016854.1 2255152 2256198 D phage protein 2255152..2256198 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761193 YP_005233205.1 CDS STMMW_21691 NC_016854.1 2256234 2256650 R pfam_scan;Pfam:PF05932; E()=6.5E-32;score=109.7;query 6-122;description=CesT; hypothetical protein complement(2256234..2256650) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761194 YP_005233206.1 CDS STMMW_21701 NC_016854.1 2256772 2257125 R tmhmm; query 1-118; hypothetical protein complement(2256772..2257125) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761195 YP_005233207.1 CDS STMMW_21711 NC_016854.1 2257669 2258568 D pfam_scan;Pfam:PF00781; E()=7.9E-28;score=96.0;query8-131;description=DAGK_cat; hypothetical protein 2257669..2258568 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761196 YP_005233208.1 CDS STMMW_21721 NC_016854.1 2258621 2259673 R pfam_scan;Pfam:PF01791; E()=1.1E-51;score=175.0;query 69-326;description=DeoC; fructose-bisphosphate aldolase complement(2258621..2259673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761197 YP_005233209.1 CDS STMMW_21731 NC_016854.1 2259927 2261198 D pfam_scan;Pfam:PF03825; E()=6.4E-182;score=604.0;query 1-404;description=Nuc_H_symport; tmhmm; query 1-424; putative nucleoside permease 2259927..2261198 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761198 YP_005233210.1 CDS STMMW_21741 NC_016854.1 2261195 2262199 D pfam_scan;Pfam:PF03747; E()=4.4E-68;score=229.6;query 8-304;description=ADP_ribosyl_GH; putative hydrolase 2261195..2262199 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761199 YP_005233211.1 CDS STMMW_21751 NC_016854.1 2262301 2263161 D pfam_scan;Pfam:PF00294; E()=1.0E-42;score=146.1;query 9-271;description=PfkB; putative sugar kinase 2262301..2263161 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761200 YP_005233212.1 CDS STMMW_21761 NC_016854.1 2263135 2263881 R pfam_scan;Pfam:PF00392; E()=1.5E-15;score=56.4;query25-87;description=GntR; pfam_scan;Pfam:PF07702; E()=4.1E-37;score=126.8;query 108-242;description=UTRA; GntR family transcriptional regulator complement(2263135..2263881) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761201 YP_005233213.1 CDS STMMW_21771 NC_016854.1 2263917 2264717 R pfam_scan;Pfam:PF08543; E()=5.0E-97;score=323.8;query 13-260;description=Phos_pyr_kin; phosphomethylpyrimidine kinase complement(2263917..2264717) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761202 YP_005233214.1 CDS STMMW_21781 NC_016854.1 2264704 2265501 R pfam_scan;Pfam:PF02110; E()=7.8E-100;score=332.7;query 15-259;description=HK; TH kinase; Thz kinase; hydroxyethylthiazole kinase; 4-methyl-5-beta-hydroxyethylthiazole kinase complement(2264704..2265501) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761203 YP_005233215.1 CDS STMMW_21791 NC_016854.1 2265911 2266225 D pfam_scan;Pfam:PF11776; E()=2.6E-19;score=67.8;query44-94;description=DUF3315; hypothetical protein 2265911..2266225 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761204 YP_005233216.1 CDS STMMW_21801 NC_016854.1 2266488 2267495 R Signal peptide; signalp; query 1-20;cleavage_site_probability=0.726; 0.783; putative fimbrial protein complement(2266488..2267495) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761205 YP_005233217.1 CDS STMMW_21811 NC_016854.1 2267511 2270000 R pfam_scan;Pfam:PF00577; E()=1.5E-238;score=793.0;query 27-817;description=Usher; outer membrane fimbrial usher protein complement(2267511..2270000) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761206 YP_005233218.1 CDS STMMW_21821 NC_016854.1 2270014 2270697 R pfam_scan;Pfam:PF00345; E()=9.1E-42;score=141.6;query 19-141;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=2.3E-11;score=43.3;query151- 222;description=Pili_assembly_C; tmhmm; query 1-228; fimbrial chaperone protein complement(2270014..2270697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761207 YP_005233219.1 CDS STMMW_21831 NC_016854.1 2270753 2271283 R pfam_scan;Pfam:PF00419; E()=1.7E-6;score=28.3;query 29-173;description=Fimbrial; fimbrial subunit protein complement(2270753..2271283) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761208 YP_005233220.1 CDS STMMW_21841 NC_016854.1 2271562 2271843 R pfam_scan;Pfam:PF10836; E()=4.3E-50;score=167.6;query 1-93;description=DUF2574; hypothetical protein complement(2271562..2271843) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761209 YP_005233221.1 CDS STMMW_21851 NC_016854.1 2272121 2273230 R pfam_scan;Pfam:PF10609; E()=4.2E-37;score=125.4;query 216-296;description=ParA; hypothetical protein complement(2272121..2273230) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761210 YP_005233222.1 CDS STMMW_21861 NC_016854.1 2273395 2275428 D pfam_scan;Pfam:PF09334; E()=1.6E-151;score=504.0;query 8-397;description=tRNA-synt_1g; pfam_scan;Pfam:PF01588; E()=2.1E-24;score=85.0;query581-674;description=tRNA_bind; Methionine--tRNA ligase; methionyl-tRNA synthetase; MetRS 2273395..2275428 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761211 YP_005233223.1 CDS STMMW_21871 NC_016854.1 2275669 2276127 D pfam_scan;Pfam:PF06998; E()=2.8E-47;score=159.3;query 28-150;description=DUF1307; putative lipoprotein 2275669..2276127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761212 YP_005233224.1 CDS STMMW_21881 NC_016854.1 2276299 2276829 D pfam_scan;Pfam:PF06998; E()=8.1E-45;score=151.3;query 52-173;description=DUF1307; putative lipoprotein 2276299..2276829 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761213 YP_005233225.1 CDS STMMW_21891 NC_016854.1 2276886 2277353 R pfam_scan;Pfam:PF07308; E()=3.0E-22;score=78.1;query4-70;description=DUF1456; hypothetical protein complement(2276886..2277353) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761214 YP_005233226.1 CDS STMMW_21901 NC_016854.1 2277400 2278119 R pfam_scan;Pfam:PF04397; E()=3.6E-24;score=84.0;query144-237;description=LytTR; pfam_scan;Pfam:PF00072; E()=1.1E-26;score=92.7;query4- 112;description=Response_reg; putative two-component system response regulator complement(2277400..2278119) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761215 YP_005233227.1 CDS STMMW_21911 NC_016854.1 2278116 2279801 R pfam_scan;Pfam:PF06580; E()=4.1E-26;score=90.2;query371- 451;description=His_kinase; pfam_scan;Pfam:PF07694; E()=1.0E-30;score=105.3;query 40-125;description=5TM-5TMR_LYT; pfam_scan;Pfam:PF01590; E()=2.6E-6;score=27.3;query 236-355;description=GAF; pfam_scan;Pfam:PF02518; E()=1.2E-9;score=37.5;query 468-557;description=HATPase_c; tmhmm; query 1-562; putative two-component system sensor kinase complement(2278116..2279801) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761216 YP_005233228.1 CDS STMMW_21921 NC_016854.1 2280024 2280755 D pfam_scan;Pfam:PF00376; E()=1.9E-10;score=39.8;query5-42;description=MerR; putative transcriptional regulator 2280024..2280755 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761217 YP_005233229.1 CDS STMMW_21941 NC_016854.1 2280903 2281748 R pfam_scan;Pfam:PF00528; E()=4.3E-25;score=87.8;query106- 274;description=BPD_transp_1; tmhmm; query 1-282; putative permease transmembrane component complement(2280903..2281748) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761218 YP_005233230.1 CDS STMMW_21951 NC_016854.1 2281618 2282565 R pfam_scan;Pfam:PF00571; E()=1.4E-4;score=21.6;query 248-307;description=CBS; pfam_scan;Pfam:PF00005; E()=5.8E-45;score=153.5;query 29-196;description=ABC_tran; ABC transporter ATP-binding protein complement(2281618..2282565) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761219 YP_005233231.1 CDS STMMW_21961 NC_016854.1 2282558 2283727 R pfam_scan;Pfam:PF00528; E()=1.2E-26;score=92.9;query199- 378;description=BPD_transp_1; tmhmm; query 1-390; putative permease transmembrane component complement(2282558..2283727) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761220 YP_005233232.1 CDS STMMW_21971 NC_016854.1 2283731 2284648 R pfam_scan;Pfam:PF04069; E()=3.7E-59;score=199.7;query 26-300;description=OpuAC; hypothetical protein complement(2283731..2284648) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761221 YP_005233233.1 CDS STMMW_21981 NC_016854.1 2284829 2287126 R pfam_scan;Pfam:PF00933; E()=1.8E-69;score=232.8;query 99-319;description=Glyco_hydro_3; pfam_scan;Pfam:PF01915; E()=1.9E-78;score=263.8;query 395-650;description=Glyco_hydro_3_C; periplasmic beta-glucosidase complement(2284829..2287126) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761222 YP_005233234.1 CDS STMMW_21991 NC_016854.1 2287393 2289123 D pfam_scan;Pfam:PF09330; E()=9.9E-154;score=510.0;query 278-567;description=Lact-deh-memb; pfam_scan;Pfam:PF01565; E()=8.9E-10;score=38.4;query47- 166;description=FAD_binding_4; D-lactate dehydrogenase 2287393..2289123 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761223 YP_005233235.1 CDS STMMW_22001 NC_016854.1 2289181 2290089 R pfam_scan;Pfam:PF00768; E()=6.2E-82;score=274.4;query 17-248;description=Peptidase_S11; penicillin-binding protein complement(2289181..2290089) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761224 YP_005233236.1 CDS STMMW_22011 NC_016854.1 2290294 2290881 R pfam_scan;Pfam:PF06930; E()=8.1E-45;score=152.2;query 7-177;description=DUF1282; tmhmm; query 1-196; hypothetical protein complement(2290294..2290881) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761225 YP_005233237.1 CDS STMMW_22021 NC_016854.1 2291013 2291609 D pfam_scan;Pfam:PF09335; E()=3.9E-19;score=68.6;query33- 153;description=SNARE_assoc; tmhmm; query 1-199; hypothetical protein 2291013..2291609 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761226 YP_005233238.1 CDS STMMW_22031 NC_016854.1 2291658 2292419 R pfam_scan;Pfam:PF00106; E()=2.6E-21;score=75.9;query3-170;description=adh_short; putative oxidoreductase complement(2291658..2292419) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761227 YP_005233239.1 CDS STMMW_22041 NC_016854.1 2292485 2293921 R pfam_scan;Pfam:PF02321; E()=4.0E-18;score=65.5;query67-266;description=OEP; putative lipoprotein complement(2292485..2293921) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761228 YP_005233240.1 CDS STMMW_22051 NC_016854.1 2294112 2294309 D hypothetical protein 2294112..2294309 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761229 YP_005233241.1 CDS STMMW_22061 NC_016854.1 2294380 2295318 R pfam_scan;Pfam:PF01207; E()=4.3E-94;score=314.5;query 4-282;description=Dus; hypothetical protein complement(2294380..2295318) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761230 YP_005233242.1 CDS STMMW_22071 NC_016854.1 2295427 2296620 R pfam_scan;Pfam:PF01494; E()=3.8E-27;score=94.7;query5- 346;description=FAD_binding_3; tmhmm; query 1-398; putative n-hydroxybenzoate hydroxylase complement(2295427..2296620) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761231 YP_005233243.1 CDS STMMW_22081 NC_016854.1 2296635 2297279 R pfam_scan;Pfam:PF00043; E()=1.2E-5;score=24.7;query 137-198;description=GST_C; pfam_scan;Pfam:PF02798; E()=1.1E-10;score=40.9;query1-75;description=GST_N; glutathione-S-transferase family protein complement(2296635..2297279) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761232 YP_005233244.1 CDS STMMW_22091 NC_016854.1 2297288 2297989 R pfam_scan;Pfam:PF01557; E()=9.2E-54;score=181.8;query 27-233;description=FAA_hydrolase; FAA-hydrolase family protein complement(2297288..2297989) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761233 YP_005233245.1 CDS STMMW_22101 NC_016854.1 2298005 2299042 R pfam_scan;Pfam:PF07883; E()=2.6E-18;score=64.9;query96-162;description=Cupin_2; putative gentisate 1,2-dioxygenase complement(2298005..2299042) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761234 YP_005233246.1 CDS STMMW_22111 NC_016854.1 2299054 2300412 R pfam_scan;Pfam:PF07690; E()=1.2E-35;score=123.1;query 28-287;description=MFS_1; pfam_scan;Pfam:PF00083; E()=3.9E-5;score=22.0;query 290-430;description=Sugar_tr; tmhmm; query 1-453; putative n-hydroxybenzoate transporter complement(2299054..2300412) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761235 YP_005233247.1 CDS STMMW_22121 NC_016854.1 2300538 2301446 D pfam_scan;Pfam:PF00126; E()=2.2E-16;score=59.1;query10-68;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.0E-35;score=122.3;query 95-301;description=LysR_substrate; putative transcriptional regulator 2300538..2301446 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761236 YP_005233248.1 CDS STMMW_22131 NC_016854.1 2301578 2301976 D pfam_scan;Pfam:PF03788; E()=1.9E-29;score=101.1;query 21-114;description=LrgA; tmhmm; query 1-133; hypothetical protein 2301578..2301976 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761237 YP_005233249.1 CDS STMMW_22141 NC_016854.1 2301973 2302668 D pfam_scan;Pfam:PF04172; E()=9.7E-83;score=276.3;query 12-226;description=LrgB; tmhmm; query 1-232; hypothetical protein 2301973..2302668 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761238 YP_005233250.1 CDS STMMW_22151 NC_016854.1 2302822 2303706 D pfam_scan;Pfam:PF00383; E()=1.6E-15;score=56.5;query53- 139;description=dCMP_cyt_deam_1; pfam_scan;Pfam:PF08211; E()=1.1E-48;score=163.9;query 157-278;description=dCMP_cyt_deam_2; cytidine deaminase 2302822..2303706 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761239 YP_005233251.1 CDS STMMW_22161 NC_016854.1 2303883 2304602 D pfam_scan;Pfam:PF02698; E()=5.3E-24;score=84.2;query47-174;description=DUF218; tmhmm; query 1-240; vancomycin resistance protein 2303883..2304602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761240 YP_005233252.1 CDS STMMW_22171 NC_016854.1 2304599 2304844 D pfam_scan;Pfam:PF10808; E()=2.6E-46;score=154.7;query 3-81;description=DUF2542; tmhmm; query 1-82; hypothetical protein 2304599..2304844 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761241 YP_005233253.1 CDS STMMW_22181 NC_016854.1 2305049 2306290 D pfam_scan;Pfam:PF07992; E()=4.2E-17;score=62.1;query126- 385;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=1.2E-6;score=28.6;query 257-346;description=Pyr_redox; putative oxidoreductase 2305049..2306290 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761242 YP_005233254.1 CDS STMMW_22191 NC_016854.1 2306284 2307519 D pfam_scan;Pfam:PF01180; E()=4.4E-38;score=130.3;query 6-304;description=DHO_dh; putative oxidoreductase 2306284..2307519 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761243 YP_005233255.1 CDS STMMW_22201 NC_016854.1 2307594 2308604 R pfam_scan;Pfam:PF02653; E()=1.8E-55;score=187.8;query 41-325;description=BPD_transp_2; tmhmm; query 1-337; galactoside transport system permease protein MglC complement(2307594..2308604) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761244 YP_005233256.1 CDS STMMW_22211 NC_016854.1 2308620 2310140 R pfam_scan;Pfam:PF00005; E()=6.8E-36;score=123.8;query 41-210;description=ABC_tran; galactoside transport atp-binding protein mgla complement(2308620..2310140) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761245 YP_005233257.1 CDS STMMW_22221 NC_016854.1 2310274 2311272 R pfam_scan;Pfam:PF00532; E()=1.2E-8;score=34.1;query 30-254;description=Peripla_BP_1; D-galactose-binding periplasmic protein complement(2310274..2311272) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761246 YP_005233258.1 CDS STMMW_22231 NC_016854.1 2311771 2312793 R pfam_scan;Pfam:PF00356; E()=1.0E-18;score=66.6;query3-48;description=LacI; pfam_scan;Pfam:PF00532; E()=1.8E-23;score=82.7;query60- 275;description=Peripla_BP_1; mgl repressor and galactose ultrainduction factor complement(2311771..2312793) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761247 YP_005233259.1 CDS STMMW_22241 NC_016854.1 2312943 2314085 R pfam_scan;Pfam:PF04235; E()=1.1E-44;score=152.0;query 215-374;description=DUF418; tmhmm; query 1-381; hypothetical protein complement(2312943..2314085) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761248 YP_005233260.1 CDS STMMW_22251 NC_016854.1 2314100 2314768 R pfam_scan;Pfam:PF01227; E()=7.3E-39;score=131.2;query 102-200;description=GTP_cyclohydroI; GTP-CH-I; GTP cyclohydrolase I complement(2314100..2314768) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761249 YP_005233261.1 CDS STMMW_22261 NC_016854.1 2315098 2315955 D pfam_scan;Pfam:PF00756; E()=4.2E-70;score=235.6;query 13-271;description=Esterase; putative esterase 2315098..2315955 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761250 YP_005233262.1 CDS STMMW_22271 NC_016854.1 2315944 2316333 R pfam_scan;Pfam:PF01381; E()=7.0E-10;score=38.1;query19-66;description=HTH_3; putative DNA-binding protein complement(2315944..2316333) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761251 YP_005233263.1 CDS STMMW_22281 NC_016854.1 2316338 2317705 R pfam_scan;Pfam:PF03313; E()=2.2E-101;score=338.3;query 183-446;description=SDH_alpha; pfam_scan;Pfam:PF03315; E()=6.1E-38;score=130.0;query 3-153;description=SDH_beta; putative L-serine dehydratase complement(2316338..2317705) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761252 YP_005233264.1 CDS STMMW_22291 NC_016854.1 2317922 2318809 D pfam_scan;Pfam:PF00702; E()=3.3E-18;score=66.2;query89-266;description=Hydrolase; putative hydrolase 2317922..2318809 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761253 YP_005233265.1 CDS STMMW_22301 NC_016854.1 2318842 2320164 D pfam_scan;Pfam:PF07690; E()=1.7E-46;score=158.8;query 37-400;description=MFS_1; tmhmm; query 1-441; putative regulatory protein 2318842..2320164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761254 YP_005233266.1 CDS STMMW_22311 NC_016854.1 2320208 2322199 R pfam_scan;Pfam:PF07715; E()=1.1E-34;score=118.4;query 44-152;description=Plug; pfam_scan;Pfam:PF00593; E()=3.8E-44;score=151.2;query 395-663;description=TonB_dep_Rec; colicin I receptor complement(2320208..2322199) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761255 YP_005233267.1 CDS STMMW_22321 NC_016854.1 2322544 2324013 R pfam_scan;Pfam:PF00324; E()=1.6E-162;score=540.7;query 21-478;description=AA_permease; tmhmm; query 1-490; lysine-specific permease complement(2322544..2324013) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761256 YP_005233268.1 CDS STMMW_22331 NC_016854.1 2324203 2325066 R pfam_scan;Pfam:PF00126; E()=3.8E-15;score=55.1;query5-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.4E-53;score=180.7;query 86-286;description=LysR_substrate; putative transcriptional regulator complement(2324203..2325066) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761257 YP_005233269.1 CDS STMMW_22341 NC_016854.1 2325187 2326236 D pfam_scan;Pfam:PF03601; E()=2.2E-116;score=388.0;query 18-326;description=Cons_hypoth698; tmhmm; query 1-350; hypothetical protein 2325187..2326236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761258 YP_005233270.1 CDS STMMW_22351 NC_016854.1 2326315 2327172 D pfam_scan;Pfam:PF01261; E()=9.3E-44;score=148.8;query 19-239;description=AP_endonuc_2; endonuclease IV; Endodeoxyribonuclease IV 2326315..2327172 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761259 YP_005233271.1 CDS STMMW_22361 NC_016854.1 2327237 2328925 R pfam_scan;Pfam:PF02378; E()=1.5E-20;score=73.1;query232-495;description=PTS_EIIC; pfam_scan;Pfam:PF02302; E()=1.1E-19;score=70.5;query106-194;description=PTS_IIB; tmhmm; query 1-563; pts system, fructose-specific IIbc component complement(2327237..2328925) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761260 YP_005233272.1 CDS STMMW_22371 NC_016854.1 2328942 2329799 R pfam_scan;Pfam:PF00294; E()=1.7E-64;score=217.6;query 3-266;description=PfkB; 1-phosphofructokinase complement(2328942..2329799) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761261 YP_005233273.1 CDS STMMW_22381 NC_016854.1 2329880 2331010 R pfam_scan;Pfam:PF00359; E()=3.6E-31;score=107.4;query 5-140;description=PTS_EIIA_2; pfam_scan;Pfam:PF00381; E()=1.9E-25;score=88.2;query286-370;description=PTS-HPr; PTS system, fructose-specific IIa/Fpr component complement(2329880..2331010) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761262 YP_005233274.1 CDS STMMW_22391 NC_016854.1 2331379 2332560 D pfam_scan;Pfam:PF07690; E()=1.8E-38;score=132.4;query 21-356;description=MFS_1; tmhmm; query 1-394; sugar efflux transporter 2331379..2332560 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761263 YP_005233275.1 CDS STMMW_22401 NC_016854.1 2332625 2333290 R tmhmm; query 1-222; hypothetical protein complement(2332625..2333290) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761264 YP_005233276.1 CDS STMMW_22421 NC_016854.1 2334242 2334952 D pfam_scan;Pfam:PF01132; E()=5.0E-13;score=47.9;query116-170;description=EFP; pfam_scan;Pfam:PF09285; E()=1.5E-20;score=72.0;query179-234;description=Elong- fact-P_C; pfam_scan;Pfam:PF08207; E()=1.0E-13;score=50.6;query50-107;description=EFP_N; elongation factor P-like protein 2334242..2334952 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761265 YP_005233277.1 CDS STMMW_22431 NC_016854.1 2335165 2336151 D pfam_scan;Pfam:PF02492; E()=5.9E-37;score=126.9;query 6-176;description=cobW; hypothetical protein 2335165..2336151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761266 YP_005233278.1 CDS STMMW_22441 NC_016854.1 2336181 2336900 D pfam_scan;Pfam:PF01569; E()=1.8E-14;score=53.2;query96-215;description=PAP2; tmhmm; query 1-240; hypothetical protein 2336181..2336900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761267 YP_005233279.1 CDS STMMW_22451 NC_016854.1 2337314 2337886 D pfam_scan;Pfam:PF00877; E()=3.7E-37;score=126.2;query 81-185;description=NLPC_P60; putative lipoprotein 2337314..2337886 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761268 YP_005233280.1 CDS STMMW_22461 NC_016854.1 2338212 2339768 D pfam_scan;Pfam:PF00563; E()=7.8E-68;score=228.1;query 267-500;description=EAL; tmhmm; query 1-519; rtn protein 2338212..2339768 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761269 YP_005233281.1 CDS STMMW_22471 NC_016854.1 2339875 2341680 D pfam_scan;Pfam:PF00496; E()=9.9E-60;score=202.1;query 98-502;description=SBP_bac_5; putative transport system periplasmic binding protein 2339875..2341680 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761270 YP_005233282.1 CDS STMMW_22481 NC_016854.1 2341690 2342784 D pfam_scan;Pfam:PF00528; E()=1.1E-39;score=135.3;query 152-359;description=BPD_transp_1; tmhmm; query 1-365; putative binding-protein-dependent transporter 2341690..2342784 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761271 YP_005233283.1 CDS STMMW_22491 NC_016854.1 2342784 2343809 D pfam_scan;Pfam:PF00528; E()=3.0E-31;score=107.9;query 158-338;description=BPD_transp_1; tmhmm; query 1-342; putative binding-protein-dependent transporter 2342784..2343809 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761272 YP_005233284.1 CDS STMMW_22501 NC_016854.1 2343811 2345400 D pfam_scan;Pfam:PF00005; E()=5.8E-46;score=156.7;query 35-217;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=2.2E-7;score=30.0;query 236-273;description=oligo_HPY; putative ABC transporter ATP-binding protein 2343811..2345400 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761273 YP_005233285.1 CDS STMMW_22511 NC_016854.1 2345404 2345748 R hypothetical protein complement(2345404..2345748) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761274 YP_005233286.1 CDS STMMW_22521 NC_016854.1 2346139 2347329 R pfam_scan;Pfam:PF07690; E()=3.7E-52;score=177.4;query 16-358;description=MFS_1; tmhmm; query 1-397; bicyclomycin resistance protein complement(2346139..2347329) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761275 YP_005233287.1 CDS STMMW_22531 NC_016854.1 2347357 2348052 R pfam_scan;Pfam:PF01479; E()=8.0E-8;score=31.4;query 1-46;description=S4; pfam_scan;Pfam:PF00849; E()=3.7E-22;score=78.8;query62- 192;description=PseudoU_synth_2; ribosomal small subunit pseudouridine synthase complement(2347357..2348052) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761276 YP_005233288.1 CDS STMMW_22541 NC_016854.1 2348204 2349964 D pfam_scan;Pfam:PF04851; E()=7.8E-31;score=106.7;query 3-155;description=ResIII; pfam_scan;Pfam:PF00271; E()=5.1E-12;score=44.7;query276- 343;description=Helicase_C; putative helicase 2348204..2349964 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761277 YP_005233289.1 CDS STMMW_22551 NC_016854.1 2350089 2350373 D pfam_scan;Pfam:PF01386; E()=5.2E-29;score=99.6;query4- 91;description=Ribosomal_L25p; 50S ribosomal protein L25 2350089..2350373 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761278 YP_005233290.1 CDS STMMW_22561 NC_016854.1 2350482 2351102 R tmhmm; query 1-207; hypothetical protein complement(2350482..2351102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761279 YP_005233291.1 CDS STMMW_22571 NC_016854.1 2351130 2352137 R pfam_scan;Pfam:PF04245; E()=1.8E-139;score=463.9;query 3-329;description=NA37; Nucleoid-associated protein complement(2351130..2352137) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761280 YP_005233292.1 CDS STMMW_22581 NC_016854.1 2352576 2354336 D pfam_scan;Pfam:PF00884; E()=5.4E-36;score=123.5;query 260-562;description=Sulfatase; tmhmm; query 1-587; putative sulfatase 2352576..2354336 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761281 YP_005233293.1 CDS STMMW_22591 NC_016854.1 2354617 2355288 R DNA polymerase V subunit complement(2354617..2355288) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761282 YP_005233294.1 CDS STMMW_22601 NC_016854.1 2355148 2355438 D pfam_scan;Pfam:PF06183; E()=2.2E-12;score=46.4;query32-94;description=DinI; putative SsrB-regulated factor 2355148..2355438 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761283 YP_005233295.1 CDS STMMW_22602 NC_016854.1 2355587 2355715 D hypothetical protein 2355587..2355715 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761284 YP_005233296.1 CDS STMMW_22611 NC_016854.1 2355795 2357624 D pfam_scan;Pfam:PF01757; E()=7.7E-40;score=136.5;query 9-318;description=Acyl_transf_3; tmhmm; query 1-610; acetylation of the O-antigen 2355795..2357624 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761285 YP_005233297.1 CDS STMMW_22631 NC_016854.1 2357678 2358121 R pfam_scan;Pfam:PF02413; E()=1.2E-26;score=93.3;query10-140;description=Caudo_TAP; tail fiber assembly protein complement(2357678..2358121) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761286 YP_005233298.1 CDS STMMW_22641 NC_016854.1 2358499 2359026 R pfam_scan;Pfam:PF02413; E()=2.1E-25;score=89.2;query41-171;description=Caudo_TAP; putative phage tail fiber assembly protein complement(2358499..2359026) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761287 YP_005233299.1 CDS STMMW_22651 NC_016854.1 2359029 2360270 R hypothetical protein complement(2359029..2360270) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761288 YP_005233300.1 CDS STMMW_22661 NC_016854.1 2360331 2360849 R pfam_scan;Pfam:PF04586; E()=1.7E-39;score=134.6;query 12-161;description=Peptidase_U35; phage prohead protease, HK97 family complement(2360331..2360849) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761289 YP_005233301.1 CDS STMMW_22671 NC_016854.1 2360863 2361192 R pfam_scan;Pfam:PF05106; E()=1.1E-19;score=69.8;query1- 76;description=Phage_holin_3; tmhmm; query 1-110; phage holin, lambda family complement(2360863..2361192) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761290 YP_005233302.1 CDS STMMW_22691 NC_016854.1 2362850 2363218 R pfam_scan;Pfam:PF06530; E()=1.1E-44;score=151.1;query 2-121;description=Phage_antitermQ; hypothetical protein complement(2362850..2363218) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761292 YP_005233303.1 CDS STMMW_22701 NC_016854.1 2363233 2364228 R pfam_scan;Pfam:PF06147; E()=6.7E-75;score=250.3;query 131-328;description=DUF968; phage protein complement(2363233..2364228) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761293 YP_005233304.1 CDS STMMW_22711 NC_016854.1 2364230 2364460 R hypothetical protein complement(2364230..2364460) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761294 YP_005233305.1 CDS STMMW_22721 NC_016854.1 2364551 2366917 R pfam_scan;Pfam:PF00560; E()=330.0;score=2.3;query 224-239;description=LRR_1; secreted effector protein complement(2364551..2366917) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761295 YP_005233306.1 CDS STMMW_22731 NC_016854.1 2367086 2367289 R putative tail fiber protein of phage complement(2367086..2367289) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761296 YP_005233307.1 CDS STMMW_22751 NC_016854.1 2368680 2368883 D pfam_scan;Pfam:PF06183; E()=5.6E-5;score=22.8;query 10-62;description=DinI; virulence protein MsgA 2368680..2368883 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761298 YP_005233308.1 CDS STMMW_22761 NC_016854.1 2369075 2369638 R pfam_scan;Pfam:PF09411; E()=3.5E-19;score=68.5;query47-187;description=PagL; tmhmm; query 1-188; hypothetical protein complement(2369075..2369638) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761299 YP_005233309.1 CDS STMMW_22771 NC_016854.1 2370368 2371015 D pfam_scan;Pfam:PF00196; E()=2.0E-23;score=81.1;query152-207;description=GerE; pfam_scan;Pfam:PF00072; E()=1.2E-30;score=105.5;query 9-121;description=Response_reg; nitrate/nitrite response regulator protein NarP 2370368..2371015 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761300 YP_005233310.1 CDS STMMW_22781 NC_016854.1 2371059 2372102 R pfam_scan;Pfam:PF03918; E()=1.4E-51;score=173.3;query 9-136;description=CcmH; tmhmm; query 1-348; cytochrome c-type biogenesis protein H2 complement(2371059..2372102) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761301 YP_005233311.1 CDS STMMW_22782 NC_016854.1 2372099 2372656 R pfam_scan;Pfam:PF08534; E()=1.1E-28;score=99.5;query41-170;description=Redoxin; tmhmm; query 1-186; thiol:disulfide interchange protein CcmG complement(2372099..2372656) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761302 YP_005233312.1 CDS STMMW_22783 NC_016854.1 2372653 2374584 R pfam_scan;Pfam:PF01578; E()=1.1E-53;score=181.4;query 89-296;description=Cytochrom_C_asm; tmhmm; query 1-644; cytochrome C-type biogenesis protein complement(2372653..2374584) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761303 YP_005233313.1 CDS STMMW_22784 NC_016854.1 2374581 2375060 R pfam_scan;Pfam:PF03100; E()=1.3E-50;score=169.8;query 4-138;description=CcmE; tmhmm; query 1-160; cytochrome C-type biogenesis protein complement(2374581..2375060) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761304 YP_005233314.1 CDS STMMW_22785 NC_016854.1 2375266 2376012 R pfam_scan;Pfam:PF01578; E()=2.2E-39;score=134.7;query 9-187;description=Cytochrom_C_asm; tmhmm; query 1-249; heme exporter protein C complement(2375266..2376012) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761305 YP_005233315.1 CDS STMMW_22786 NC_016854.1 2376055 2376714 R pfam_scan;Pfam:PF03379; E()=1.2E-82;score=275.9;query 2-215;description=CcmB; tmhmm; query 1-220; Heme exporter protein B complement(2376055..2376714) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761306 YP_005233316.1 CDS STMMW_22791 NC_016854.1 2376711 2377328 R pfam_scan;Pfam:PF00005; E()=2.3E-38;score=131.9;query 27-184;description=ABC_tran; heme exporter protein A2 complement(2376711..2377328) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761307 YP_005233317.1 CDS STMMW_22801 NC_016854.1 2377349 2377951 R pfam_scan;Pfam:PF03264; E()=2.8E-80;score=267.2;query 22-193;description=Cytochrom_NNT; tmhmm; query 1-201; cytochrome c-type protein NapC complement(2377349..2377951) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761308 YP_005233318.1 CDS STMMW_22811 NC_016854.1 2377961 2378410 R pfam_scan;Pfam:PF03892; E()=3.5E-46;score=155.9;query 33-143;description=NapB; cytochrome c-type protein NapB precursor complement(2377961..2378410) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761309 YP_005233319.1 CDS STMMW_22821 NC_016854.1 2378526 2379395 R tmhmm; query 1-290; ferredoxin-type protein NapH complement(2378526..2379395) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761310 YP_005233320.1 CDS STMMW_22831 NC_016854.1 2379382 2380077 R pfam_scan;Pfam:PF00037; E()=2.1E-6;score=26.5;query 58-76;description=Fer4; ferredoxin-type protein NapG complement(2379382..2380077) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761311 YP_005233321.1 CDS STMMW_22841 NC_016854.1 2380084 2382570 R pfam_scan;Pfam:PF00384; E()=2.6E-73;score=246.8;query 96-567;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=3.8E-17;score=61.3;query40- 92;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=3.1E-27;score=93.9;query714- 822;description=Molydop_binding; nitrate reductase complement(2380084..2382570) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761312 YP_005233322.1 CDS STMMW_22851 NC_016854.1 2382567 2382830 R pfam_scan;Pfam:PF03927; E()=2.4E-25;score=88.2;query4-82;description=NapD; putative napAB assembly protein complement(2382567..2382830) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761313 YP_005233323.1 CDS STMMW_22861 NC_016854.1 2382820 2383311 R pfam_scan;Pfam:PF00037; E()=2.4E-7;score=29.4;query 134-156;description=Fer4; ferredoxin-type protein NapF complement(2382820..2383311) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761314 YP_005233324.1 CDS STMMW_22871 NC_016854.1 2383725 2384219 D pfam_scan;Pfam:PF03974; E()=9.2E-54;score=180.4;query 30-154;description=Ecotin; Ecotin 2383725..2384219 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761315 YP_005233325.1 CDS STMMW_22881 NC_016854.1 2384428 2386071 R pfam_scan;Pfam:PF00005; E()=2.5E-32;score=112.2;query 349-510;description=ABC_tran; tmhmm; query 1-548; putative ABC transporter ATP-binding protein complement(2384428..2386071) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761316 YP_005233326.1 CDS STMMW_22891 NC_016854.1 2386147 2386797 R AlkB protein complement(2386147..2386797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761317 YP_005233327.1 CDS STMMW_22901 NC_016854.1 2386800 2387861 R pfam_scan;Pfam:PF01035; E()=2.5E-31;score=106.7;query 269-350;description=DNA_binding_1; pfam_scan;Pfam:PF02870; E()=4.4E-18;score=64.7;query189- 266;description=Methyltransf_1N; pfam_scan;Pfam:PF00165; E()=8.8E-7;score=28.4;query 98-131;description=HTH_AraC; pfam_scan;Pfam:PF02805; E()=6.9E-30;score=102.1;query 10-75;description=Ada_Zn_binding; ADA regulatory protein complement(2386800..2387861) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761318 YP_005233328.1 CDS STMMW_22911 NC_016854.1 2387942 2388994 R pfam_scan;Pfam:PF02424; E()=9.0E-88;score=293.6;query 72-326;description=ApbE; thiamine biosynthesis protein complement(2387942..2388994) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761319 YP_005233329.1 CDS STMMW_22921 NC_016854.1 2389109 2390077 R pfam_scan;Pfam:PF00267; E()=2.9E-138;score=460.1;query 1-322;description=Porin_1; outer membrane protein C complement(2389109..2390077) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761320 YP_005233330.1 CDS STMMW_22931 NC_016854.1 2390974 2393643 D pfam_scan;Pfam:PF02518; E()=1.6E-12;score=46.7;query565-675;description=HATPase_c; pfam_scan;Pfam:PF01627; E()=1.3E-12;score=46.9;query809-885;description=Hpt; tmhmm; query 1-890; putative two-component system sensor kinase 2390974..2393643 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761321 YP_005233331.1 CDS STMMW_22941 NC_016854.1 2393660 2394310 D pfam_scan;Pfam:PF00196; E()=9.4E-18;score=63.0;query149-204;description=GerE; pfam_scan;Pfam:PF00072; E()=5.2E-21;score=74.4;query6- 120;description=Response_reg; regulator of capsule synthesis B component 2393660..2394310 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761322 YP_005233332.1 CDS STMMW_22951 NC_016854.1 2394413 2397259 R pfam_scan;Pfam:PF09456; E()=1.1E-36;score=124.0;query 708-799;description=RcsC; pfam_scan;Pfam:PF02518; E()=6.8E-34;score=115.5;query 581-690;description=HATPase_c; pfam_scan;Pfam:PF00072; E()=3.6E-30;score=103.9;query 827-936;description=Response_reg; pfam_scan;Pfam:PF00512; E()=3.0E-18;score=65.0;query470-534;description=HisKA; tmhmm; query 1-949; sensor protein RcsC complement(2394413..2397259) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761323 YP_005233333.1 CDS STMMW_22961 NC_016854.1 2397377 2400013 R pfam_scan;Pfam:PF03989; E()=7.4E-11;score=41.3;query537- 585;description=DNA_gyraseA_C; pfam_scan;Pfam:PF00521; E()=1.5E-174;score=581.0;query 32-506;description=DNA_topoisoIV; DNA gyrase subunit A complement(2397377..2400013) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761324 YP_005233334.1 CDS STMMW_22971 NC_016854.1 2400423 2401625 R pfam_scan;Pfam:PF01188; E()=9.0E-14;score=51.1;query149-269;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=4.0E-22;score=78.1;query18-121;description=MR_MLE_N; putative MR-MLE family protein complement(2400423..2401625) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761325 YP_005233335.1 CDS STMMW_22981 NC_016854.1 2401640 2402965 R pfam_scan;Pfam:PF07690; E()=1.2E-51;score=175.7;query 24-388;description=MFS_1; tmhmm; query 1-442; putative transmembrane transpot protein complement(2401640..2402965) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761326 YP_005233336.1 CDS STMMW_22991 NC_016854.1 2403015 2403899 D pfam_scan;Pfam:PF00392; E()=5.1E-12;score=45.2;query85-146;description=GntR; pfam_scan;Pfam:PF07729; E()=1.8E-19;score=69.5;query156-278;description=FCD; putative regulatory protein 2403015..2403899 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761327 YP_005233337.1 CDS STMMW_23001 NC_016854.1 2403982 2404710 D pfam_scan;Pfam:PF08241; E()=1.4E-20;score=73.0;query61- 157;description=Methyltransf_11; 3-demethylubiquinone-9 3-methyltransferase; DHHB methyltransferase; 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase 2403982..2404710 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761328 YP_005233338.1 CDS STMMW_23011 NC_016854.1 2405066 2407351 D pfam_scan;Pfam:PF03477; E()=4.9E-11;score=42.6;query6-92;description=ATP-cone; pfam_scan;Pfam:PF02867; E()=1.8E-142;score=475.0;query 222-731;description=Ribonuc_red_lgC; pfam_scan;Pfam:PF00317; E()=2.1E-15;score=56.1;query142- 219;description=Ribonuc_red_lgN; ribonucleoside-diphosphate reductase 1 alpha chain 2405066..2407351 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761329 YP_005233339.1 CDS STMMW_23021 NC_016854.1 2407464 2408594 D pfam_scan;Pfam:PF00268; E()=9.1E-13;score=47.4;query31- 159;description=Ribonuc_red_sm; ribonucleoside-diphosphate reductase 1 beta chain 2407464..2408594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761330 YP_005233340.1 CDS STMMW_23031 NC_016854.1 2408594 2408848 D pfam_scan;Pfam:PF00111; E()=8.9E-13;score=47.4;query9-77;description=Fer2; putative ferredoxin 2408594..2408848 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761331 YP_005233341.1 CDS STMMW_23041 NC_016854.1 2408850 2410040 R pfam_scan;Pfam:PF07690; E()=2.5E-48;score=164.8;query 14-347;description=MFS_1; tmhmm; query 1-397; putative transmembrane transport protein complement(2408850..2410040) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761332 YP_005233342.1 CDS STMMW_23051 NC_016854.1 2410202 2411080 D pfam_scan;Pfam:PF00126; E()=3.1E-18;score=65.0;query3-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=3.8E-38;score=130.3;query 89-265;description=LysR_substrate; putative transcriptional regulator 2410202..2411080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761333 YP_005233343.1 CDS STMMW_23061 NC_016854.1 2411196 2412266 R pfam_scan;Pfam:PF03009; E()=6.4E-62;score=209.5;query 33-347;description=GDPD; tmhmm; query 1-357; glycerophosphoryl diester phosphodiesterase periplasmic precursor complement(2411196..2412266) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761334 YP_005233344.1 CDS STMMW_23071 NC_016854.1 2412271 2413629 R pfam_scan;Pfam:PF07690; E()=5.4E-48;score=163.7;query 34-399;description=MFS_1; tmhmm; query 1-453; glycerol-3-phosphate transporter complement(2412271..2413629) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761335 YP_005233345.1 CDS STMMW_23081 NC_016854.1 2413902 2415530 D pfam_scan;Pfam:PF01266; E()=3.6E-60;score=203.9;query 10-366;description=DAO; pfam_scan;Pfam:PF04324; E()=1.7E-6;score=27.4;query 432-476;description=Fer2_BFD; anaerobic glycerol-3-phosphate dehydrogenase subunit A 2413902..2415530 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761336 YP_005233346.1 CDS STMMW_23091 NC_016854.1 2415520 2416779 D pfam_scan;Pfam:PF00890; E()=1.2E-63;score=214.9;query 4-399;description=FAD_binding_2; Anaerobic G3Pdhase B; Anaerobic G3Pdhase B. anaerobic glycerol-3-phosphate dehydrogenase subunit B EC 1.1.99.5; Anaerobic G-3-P dehydrogenase subunit B 2415520..2416779 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761337 YP_005233347.1 CDS STMMW_23101 NC_016854.1 2416776 2417966 D pfam_scan;Pfam:PF02754; E()=3.7E-7;score=29.3;query 186-249;description=CCG; anaerobic glycerol-3-phosphate dehydrogenase subunit C 2416776..2417966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761338 YP_005233348.1 CDS STMMW_23111 NC_016854.1 2418461 2419414 D hypothetical protein 2418461..2419414 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761339 YP_005233349.1 CDS STMMW_23121 NC_016854.1 2419524 2419700 R hypothetical protein complement(2419524..2419700) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761340 YP_005233350.1 CDS STMMW_23131 NC_016854.1 2419706 2420509 R pfam_scan;Pfam:PF03328; E()=4.1E-66;score=222.1;query 19-244;description=HpcH_HpaI; putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(2419706..2420509) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761341 YP_005233351.1 CDS STMMW_23141 NC_016854.1 2420535 2421824 R pfam_scan;Pfam:PF07690; E()=4.1E-47;score=160.8;query 22-381;description=MFS_1; tmhmm; query 1-430; putative transport protein complement(2420535..2421824) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761342 YP_005233352.1 CDS STMMW_23151 NC_016854.1 2421880 2423097 R pfam_scan;Pfam:PF01188; E()=2.8E-18;score=65.5;query184-270;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=6.7E-7;score=29.1;query 94-161;description=MR_MLE_N; putative MR-MLE family protein complement(2421880..2423097) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761343 YP_005233353.1 CDS STMMW_23161 NC_016854.1 2423099 2423881 R pfam_scan;Pfam:PF01614; E()=1.6E-40;score=137.7;query 122-247;description=IclR; pfam_scan;Pfam:PF09339; E()=4.8E-6;score=26.0;query 9-56;description=HTH_IclR; putative transcriptional regulator complement(2423099..2423881) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761344 YP_005233354.1 CDS STMMW_23171 NC_016854.1 2424131 2425327 R pfam_scan;Pfam:PF00994; E()=5.2E-29;score=100.7;query 6-170;description=MoCF_biosynth; hypothetical protein complement(2424131..2425327) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761345 YP_005233355.1 CDS STMMW_23181 NC_016854.1 2425442 2426089 R pfam_scan;Pfam:PF07437; E()=9.7E-83;score=275.8;query 36-215;description=YfaZ; hypothetical protein complement(2425442..2426089) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761346 YP_005233356.1 CDS STMMW_23191 NC_016854.1 2426263 2426688 D pfam_scan;Pfam:PF00293; E()=5.6E-24;score=84.1;query3-136;description=NUDIX; hypothetical protein 2426263..2426688 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761347 YP_005233357.1 CDS STMMW_23201 NC_016854.1 2426733 2427338 R pfam_scan;Pfam:PF00300; E()=1.9E-7;score=31.0;query 57-131;description=PGAM; tmhmm; query 1-202; Ais protein complement(2426733..2427338) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761348 YP_005233358.1 CDS STMMW_23211 NC_016854.1 2427619 2428776 D pfam_scan;Pfam:PF01041; E()=3.8E-133;score=443.7;query 17-379;description=DegT_DnrJ_EryC1; putative lipopolysaccharide biosynthesis protein 2427619..2428776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761349 YP_005233359.1 CDS STMMW_23221 NC_016854.1 2428779 2429762 D pfam_scan;Pfam:PF00535; E()=1.9E-30;score=105.1;query 11-173;description=Glycos_transf_2; tmhmm; query 1-328; putative lipopolysaccharide modification protein 2428779..2429762 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761350 YP_005233360.1 CDS STMMW_23231 NC_016854.1 2429759 2431741 D pfam_scan;Pfam:PF00551; E()=6.6E-24;score=84.3;query57- 173;description=Formyl_trans_N; pfam_scan;Pfam:PF01370; E()=4.7E-41;score=140.3;query 318-566;description=Epimerase; pfam_scan;Pfam:PF02911; E()=2.3E-20;score=72.2;query202- 294;description=Formyl_trans_C; putative lipopolysaccharide modification protein 2429759..2431741 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761351 YP_005233361.1 CDS STMMW_23241 NC_016854.1 2431738 2432637 D pfam_scan;Pfam:PF01522; E()=7.1E-10;score=38.2;query15- 169;description=Polysacc_deac_1; hypothetical protein 2431738..2432637 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761352 YP_005233362.1 CDS STMMW_23251 NC_016854.1 2432634 2434280 D pfam_scan;Pfam:PF02366; E()=8.1E-55;score=185.4;query 5-238;description=PMT; tmhmm; query 1-549; melittin resistance protein PqaB 2432634..2434280 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761353 YP_005233363.1 CDS STMMW_23261 NC_016854.1 2434277 2434612 D pfam_scan;Pfam:PF00892; E()=3.1E-9;score=36.6;query 32-107;description=DUF6; tmhmm; query 1-112; putative inner membrane protein 2434277..2434612 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761354 YP_005233364.1 CDS STMMW_23271 NC_016854.1 2434612 2434989 D tmhmm; query 1-126; hypothetical protein 2434612..2434989 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761355 YP_005233365.1 CDS STMMW_23281 NC_016854.1 2434984 2435241 R pfam_scan;Pfam:PF11183; E()=9.6E-47;score=156.5;query 1-82;description=PmrD; polymyxin B resistance protein complement(2434984..2435241) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761356 YP_005233366.1 CDS STMMW_23291 NC_016854.1 2435339 2436706 R pfam_scan;Pfam:PF00501; E()=1.4E-60;score=204.6;query 29-382;description=AMP-binding; O-succinylbenzoic acid--CoA ligase complement(2435339..2436706) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761357 YP_005233367.1 CDS STMMW_23301 NC_016854.1 2436703 2437665 R pfam_scan;Pfam:PF01188; E()=7.3E-10;score=38.6;query120-199;description=MR_MLE; O-succinylbenzoate synthase; O-succinylbenzoate-CoA synthase; O-succinylbenzoic acid synthase; OSB synthase; OSBS; 4-2'-carboxyphenyl-4-oxybutyric acid synthase complement(2436703..2437665) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761358 YP_005233368.1 CDS STMMW_23311 NC_016854.1 2437665 2438522 R pfam_scan;Pfam:PF00378; E()=1.9E-54;score=183.2;query 35-206;description=ECH; naphthoate synthase complement(2437665..2438522) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761359 YP_005233369.1 CDS STMMW_23321 NC_016854.1 2438537 2439295 R pfam_scan;Pfam:PF00561; E()=1.1E-12;score=47.6;query45- 240;description=Abhydrolase_1; hypothetical protein complement(2438537..2439295) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761360 YP_005233370.1 CDS STMMW_23331 NC_016854.1 2439292 2440962 R pfam_scan;Pfam:PF02776; E()=1.2E-21;score=76.8;query9- 130;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=2.4E-7;score=30.4;query 422-534;description=TPP_enzyme_C; menaquinone biosynthesis protein complement(2439292..2440962) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761361 YP_005233371.1 CDS STMMW_23341 NC_016854.1 2441048 2442343 R pfam_scan;Pfam:PF00425; E()=9.6E-67;score=224.2;query 168-419;description=Chorismate_bind; isochorismate synthase complement(2441048..2442343) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761362 YP_005233372.1 CDS STMMW_23351 NC_016854.1 2442804 2443265 R pfam_scan;Pfam:PF00583; E()=8.3E-10;score=38.2;query55- 129;description=Acetyltransf_1; hypothetical protein complement(2442804..2443265) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761363 YP_005233373.1 CDS STMMW_23361 NC_016854.1 2443326 2444243 D pfam_scan;Pfam:PF00753; E()=3.9E-10;score=39.1;query20-89;description=Lactamase_B; putative hydrolase; ribonuclease Z; tRNA 3 endonuclease; RNase Z 2443326..2444243 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761364 YP_005233374.1 CDS STMMW_23371 NC_016854.1 2444309 2445310 D pfam_scan;Pfam:PF01584; E()=7.5E-25;score=87.1;query22-163;description=CheW; pfam_scan;Pfam:PF00072; E()=1.3E-11;score=44.1;query190- 310;description=Response_reg; putative receptor/regulator protein 2444309..2445310 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761365 YP_005233375.1 CDS STMMW_23381 NC_016854.1 2445351 2447132 R pfam_scan;Pfam:PF00092; E()=1.6E-18;score=66.6;query233-400;description=VWA; lipoprotein complement(2445351..2447132) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761366 YP_005233376.1 CDS STMMW_23391 NC_016854.1 2448020 2449297 R pfam_scan;Pfam:PF00361; E()=2.8E-72;score=242.7;query 62-340;description=Oxidored_q1; tmhmm; query 1-426; NADH dehydrogenase I subunit N complement(2448020..2449297) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761367 YP_005233377.1 CDS STMMW_23401 NC_016854.1 2449484 2451013 R pfam_scan;Pfam:PF00361; E()=6.8E-67;score=225.0;query 135-413;description=Oxidored_q1; tmhmm; query 1-510; NADH dehydrogenase I subunit M complement(2449484..2451013) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761368 YP_005233378.1 CDS STMMW_23411 NC_016854.1 2451327 2453168 R pfam_scan;Pfam:PF00361; E()=3.1E-86;score=288.5;query 133-405;description=Oxidored_q1; pfam_scan;Pfam:PF00662; E()=1.5E-21;score=74.8;query63- 121;description=Oxidored_q1_N; tmhmm; query 1-614; NADH dehydrogenase I subunit L complement(2451327..2453168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761369 YP_005233379.1 CDS STMMW_23421 NC_016854.1 2453464 2454018 R pfam_scan;Pfam:PF00499; E()=4.6E-21;score=74.7;query14- 156;description=Oxidored_q3; tmhmm; query 1-185; NADH dehydrogenase I subunit J complement(2453464..2454018) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761370 YP_005233380.1 CDS STMMW_23431 NC_016854.1 2454029 2454571 R pfam_scan;Pfam:PF00037; E()=9.3E-5;score=21.3;query 57-76;description=Fer4; NADH dehydrogenase I subunit I complement(2454029..2454571) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761371 YP_005233381.1 CDS STMMW_23441 NC_016854.1 2454586 2455563 R pfam_scan;Pfam:PF00146; E()=1.4E-123;score=411.2;query 15-320;description=NADHdh; tmhmm; query 1-326; NADH dehydrogenase I subunit H complement(2454586..2455563) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761372 YP_005233382.1 CDS STMMW_23451 NC_016854.1 2455560 2458292 R pfam_scan;Pfam:PF00384; E()=2.8E-17;score=62.5;query282- 639;description=Molybdopterin; pfam_scan;Pfam:PF10588; E()=6.2E-16;score=56.6;query90-130;description=NADH-G_4Fe- 4S_3; pfam_scan;Pfam:PF04879; E()=6.8E-12;score=44.6;query223- 276;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF00111; E()=6.0E-8;score=32.0;query 7-74;description=Fer2; pfam_scan;Pfam:PF01568; E()=2.7E-8;score=33.0;query 828-892;description=Molydop_binding; NADH dehydrogenase I subunit G complement(2455560..2458292) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761373 YP_005233383.1 CDS STMMW_23461 NC_016854.1 2458317 2459654 R pfam_scan;Pfam:PF10589; E()=4.1E-18;score=63.6;query336-381;description=NADH_4Fe- 4S; pfam_scan;Pfam:PF10531; E()=5.9E-7;score=28.9;query 253-287;description=SLBB; pfam_scan;Pfam:PF01512; E()=1.2E-45;score=154.8;query 54-226;description=Complex1_51K; NADH dehydrogenase I subunit F complement(2458317..2459654) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761374 YP_005233384.1 CDS STMMW_23471 NC_016854.1 2459651 2460151 R pfam_scan;Pfam:PF01257; E()=5.5E-51;score=171.2;query 23-166;description=Complex1_24kDa; NADH dehydrogenase I subunit E complement(2459651..2460151) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761375 YP_005233385.1 CDS STMMW_23481 NC_016854.1 2460154 2461956 R pfam_scan;Pfam:PF00346; E()=1.4E-120;score=401.1;query 329-600;description=Complex1_49kDa; pfam_scan;Pfam:PF00329; E()=2.2E-33;score=113.8;query 62-171;description=Complex1_30kDa; chain D; NADH dehydrogenase I subunit C complement(2460154..2461956) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761376 YP_005233386.1 CDS STMMW_23491 NC_016854.1 2462043 2462705 R pfam_scan;Pfam:PF01058; E()=7.2E-26;score=89.9;query63- 171;description=Oxidored_q6; NADH dehydrogenase I subunit B complement(2462043..2462705) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761377 YP_005233387.1 CDS STMMW_23501 NC_016854.1 2462721 2463164 R pfam_scan;Pfam:PF00507; E()=9.0E-27;score=92.2;query26- 125;description=Oxidored_q4; tmhmm; query 1-148; NADH dehydrogenase I subunit A complement(2462721..2463164) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761378 YP_005233388.1 CDS STMMW_23511 NC_016854.1 2463559 2463711 R hypothetical protein complement(2463559..2463711) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761379 YP_005233389.1 CDS STMMW_23521 NC_016854.1 2463791 2464729 R pfam_scan;Pfam:PF00126; E()=6.2E-17;score=60.8;query13-71;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.0E-30;score=103.5;query 97-275;description=LysR_substrate; NADH dehydrogenase operon transcriptional regulator complement(2463791..2464729) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761380 YP_005233390.1 CDS STMMW_23531 NC_016854.1 2465661 2466875 D pfam_scan;Pfam:PF00155; E()=4.3E-51;score=173.7;query 34-394;description=Aminotran_1_2; putative aminotransferase 2465661..2466875 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761381 YP_005233391.1 CDS STMMW_23541 NC_016854.1 2466969 2467568 D pfam_scan;Pfam:PF01966; E()=1.6E-9;score=37.3;query 30-141;description=HD; putative oxetanocin A biosynthetic enzyme 2466969..2467568 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761382 YP_005233392.1 CDS STMMW_23551 NC_016854.1 2467660 2469486 R pfam_scan;Pfam:PF03600; E()=3.8E-56;score=190.2;query 11-556;description=CitMHS; pfam_scan;Pfam:PF02080; E()=1.4E-8;score=34.2;query 230-294;description=TrkA_C; tmhmm; query 1-609; putative sodium/sulfate transporter complement(2467660..2469486) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761383 YP_005233393.1 CDS STMMW_23561 NC_016854.1 2469563 2470240 R pfam_scan;Pfam:PF00702; E()=5.4E-35;score=120.9;query 10-189;description=Hydrolase; putative phosphatase complement(2469563..2470240) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761384 YP_005233394.1 CDS STMMW_23571 NC_016854.1 2470233 2470727 R pfam_scan;Pfam:PF03887; E()=5.3E-86;score=285.9;query 1-164;description=YfbU; hypothetical protein complement(2470233..2470727) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761385 YP_005233395.1 CDS STMMW_23581 NC_016854.1 2470810 2471265 R pfam_scan;Pfam:PF04217; E()=2.7E-61;score=204.9;query 10-149;description=DUF412; tmhmm; query 1-152; hypothetical protein complement(2470810..2471265) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761386 YP_005233396.1 CDS STMMW_23591 NC_016854.1 2471605 2472807 D pfam_scan;Pfam:PF00871; E()=4.5E-169;score=561.9;query 6-393;description=Acetate_kinase; acetate kinase; Acetokinase 2471605..2472807 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761387 YP_005233397.1 CDS STMMW_23601 NC_016854.1 2472884 2475028 D pfam_scan;Pfam:PF07085; E()=9.3E-31;score=105.4;query 233-344;description=DRTGG; pfam_scan;Pfam:PF01515; E()=1.5E-131;score=437.8;query 391-706;description=PTA_PTB; phosphate acetyltransferase 2472884..2475028 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761388 YP_005233398.1 CDS STMMW_23611 NC_016854.1 2475246 2476766 D pfam_scan;Pfam:PF03606; E()=1.6E-154;score=514.6;query 15-501;description=DcuC; tmhmm; query 1-507; hypothetical protein 2475246..2476766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761389 YP_005233399.1 CDS STMMW_23621 NC_016854.1 2476815 2477768 R pfam_scan;Pfam:PF02779; E()=1.9E-22;score=79.0;query12- 174;description=Transket_pyr; pfam_scan;Pfam:PF02780; E()=9.2E-33;score=112.2;query 189-309;description=Transketolase_C; putative transketolase C-terminal section complement(2476815..2477768) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761390 YP_005233400.1 CDS STMMW_23631 NC_016854.1 2477761 2478591 R pfam_scan;Pfam:PF00456; E()=5.8E-54;score=182.5;query 8-257;description=Transketolase_N; putative transketolase N-terminal section complement(2477761..2478591) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761391 YP_005233401.1 CDS STMMW_23641 NC_016854.1 2478588 2479979 R pfam_scan;Pfam:PF03611; E()=1.5E-161;score=537.4;query 11-409;description=EIIC-GAT; tmhmm; query 1-464; hypothetical protein complement(2478588..2479979) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761392 YP_005233402.1 CDS STMMW_23651 NC_016854.1 2480000 2480272 R pfam_scan;Pfam:PF02302; E()=2.8E-16;score=59.7;query2-83;description=PTS_IIB; putative sugar phosphotransferase component II B complement(2480000..2480272) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761393 YP_005233403.1 CDS STMMW_23661 NC_016854.1 2480353 2480796 R pfam_scan;Pfam:PF00359; E()=3.6E-34;score=117.2;query 6-146;description=PTS_EIIA_2; putative sugar phosphotransferase component II A complement(2480353..2480796) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761394 YP_005233404.1 CDS STMMW_23671 NC_016854.1 2481049 2482068 D pfam_scan;Pfam:PF00356; E()=3.6E-17;score=61.7;query14-59;description=LacI; pfam_scan;Pfam:PF00532; E()=9.0E-21;score=73.8;query71- 324;description=Peripla_BP_1; putative transcriptional regulator 2481049..2482068 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761395 YP_005233405.1 CDS STMMW_23681 NC_016854.1 2482074 2482628 R pfam_scan;Pfam:PF00293; E()=1.5E-20;score=73.0;query37-161;description=NUDIX; hypothetical protein complement(2482074..2482628) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761396 YP_005233406.1 CDS STMMW_23691 NC_016854.1 2482685 2483236 R pfam_scan;Pfam:PF00149; E()=2.6E-14;score=52.2;query1-129;description=Metallophos; hypothetical protein complement(2482685..2483236) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761397 YP_005233407.1 CDS STMMW_23701 NC_016854.1 2483292 2483936 R pfam_scan;Pfam:PF02798; E()=3.6E-11;score=42.4;query18-81;description=GST_N; putative glutathione-S transferase complement(2483292..2483936) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761398 YP_005233408.1 CDS STMMW_23711 NC_016854.1 2484079 2484726 D pfam_scan;Pfam:PF00043; E()=6.4E-11;score=41.6;query136-197;description=GST_C; pfam_scan;Pfam:PF02798; E()=1.6E-7;score=30.8;query 4-81;description=GST_N; putative glutathione-S transferase 2484079..2484726 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761399 YP_005233409.1 CDS STMMW_23721 NC_016854.1 2484852 2485745 D pfam_scan;Pfam:PF08338; E()=2.1E-16;score=58.9;query249-295;description=DUF1731; pfam_scan;Pfam:PF01370; E()=2.1E-25;score=89.1;query3-221;description=Epimerase; hypothetical protein 2484852..2485745 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761400 YP_005233410.1 CDS STMMW_23731 NC_016854.1 2485797 2486573 R pfam_scan;Pfam:PF00005; E()=4.2E-49;score=167.0;query 32-214;description=ABC_tran; histidine transport ATP-binding protein complement(2485797..2486573) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761401 YP_005233411.1 CDS STMMW_23741 NC_016854.1 2486584 2487291 R pfam_scan;Pfam:PF00528; E()=1.2E-17;score=63.5;query37- 227;description=BPD_transp_1; tmhmm; query 1-236; histidine transport system permease complement(2486584..2487291) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761402 YP_005233412.1 CDS STMMW_23751 NC_016854.1 2487288 2487974 R pfam_scan;Pfam:PF00528; E()=6.4E-28;score=97.1;query28- 220;description=BPD_transp_1; tmhmm; query 1-229; histidine transport system permease complement(2487288..2487974) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761403 YP_005233413.1 CDS STMMW_23761 NC_016854.1 2488157 2488939 R pfam_scan;Pfam:PF00497; E()=7.1E-71;score=238.5;query 28-254;description=SBP_bac_3; histidine-binding periplasmic protein complement(2488157..2488939) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761404 YP_005233414.1 CDS STMMW_23771 NC_016854.1 2489177 2489959 R pfam_scan;Pfam:PF00497; E()=3.8E-69;score=232.8;query 28-254;description=SBP_bac_3; tmhmm; query 1-261; lysine-arginine-ornithine-binding periplasmic protein complement(2489177..2489959) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761405 YP_005233415.1 CDS STMMW_23781 NC_016854.1 2490248 2490817 R pfam_scan;Pfam:PF02441; E()=1.6E-27;score=95.5;query2- 123;description=Flavoprotein; putative decarboxylase complement(2490248..2490817) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761406 YP_005233416.1 CDS STMMW_23791 NC_016854.1 2490844 2492250 R pfam_scan;Pfam:PF00324; E()=5.7E-99;score=331.1;query 24-432;description=AA_permease; tmhmm; query 1-469; putative amino acid permease complement(2490844..2492250) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761407 YP_005233417.1 CDS STMMW_23801 NC_016854.1 2492314 2493417 R pfam_scan;Pfam:PF01168; E()=1.0E-19;score=70.9;query8- 222;description=Ala_racemase_N; hypothetical protein complement(2492314..2493417) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761408 YP_005233418.1 CDS STMMW_23811 NC_016854.1 2493419 2494840 R pfam_scan;Pfam:PF00324; E()=1.3E-28;score=99.2;query36- 466;description=AA_permease; tmhmm; query 1-474; putative amino acid transporter complement(2493419..2494840) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761409 YP_005233419.1 CDS STMMW_23821 NC_016854.1 2494931 2496328 R pfam_scan;Pfam:PF00278; E()=1.6E-20;score=72.5;query318- 441;description=Orn_DAP_Arg_deC; pfam_scan;Pfam:PF02784; E()=4.5E-43;score=146.8;query 55-314;description=Orn_Arg_deC_N; putative amino acid decarboxylase complement(2494931..2496328) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761410 YP_005233420.1 CDS STMMW_23831 NC_016854.1 2496539 2497966 D pfam_scan;Pfam:PF00158; E()=5.6E-61;score=204.8;query 151-314;description=Sigma54_activat; pfam_scan;Pfam:PF08448; E()=1.1E-9;score=38.0;query 19-127;description=PAS_4; pfam_scan;Pfam:PF02954; E()=9.2E-13;score=47.1;query426-466;description=HTH_8; putative transcriptional regulator 2496539..2497966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761411 YP_005233421.1 CDS STMMW_23841 NC_016854.1 2498002 2499519 R pfam_scan;Pfam:PF00156; E()=2.8E-13;score=49.4;query279- 395;description=Pribosyltran; pfam_scan;Pfam:PF00310; E()=1.1E-21;score=76.8;query56-210;description=GATase_2; amidophosphoribosyltransferase complement(2498002..2499519) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761412 YP_005233422.1 CDS STMMW_23851 NC_016854.1 2499557 2500045 R pfam_scan;Pfam:PF02674; E()=1.5E-38;score=131.5;query 4-141;description=Colicin_V; tmhmm; query 1-163; colicin V production protein (DedE protein) complement(2499557..2500045) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761413 YP_005233423.1 CDS STMMW_23861 NC_016854.1 2500356 2501030 R pfam_scan;Pfam:PF05036; E()=6.7E-13;score=48.1;query145-219;description=SPOR; tmhmm; query 1-225; DedD protein complement(2500356..2501030) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761414 YP_005233424.1 CDS STMMW_23871 NC_016854.1 2501020 2502288 R pfam_scan;Pfam:PF08245; E()=1.6E-12;score=47.5;query54- 199;description=Mur_ligase_M; pfam_scan;Pfam:PF02875; E()=3.2E-7;score=30.2;query 287-339;description=Mur_ligase_C; folylpolyglutamate synthase complement(2501020..2502288) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761415 YP_005233425.1 CDS STMMW_23881 NC_016854.1 2502356 2503270 R pfam_scan;Pfam:PF01039; E()=1.6E-19;score=69.3;query54- 240;description=Carboxyl_trans; acetyl-CoA carboxylase subunit beta complement(2502356..2503270) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761416 YP_005233426.1 CDS STMMW_23891 NC_016854.1 2503420 2504079 R pfam_scan;Pfam:PF09335; E()=8.8E-27;score=93.3;query49- 177;description=SNARE_assoc; tmhmm; query 1-220; DedA protein (dsg-1 protein) complement(2503420..2504079) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761417 YP_005233427.1 CDS STMMW_23901 NC_016854.1 2504128 2504940 R pfam_scan;Pfam:PF01416; E()=3.7E-13;score=49.1;query16- 112;description=PseudoU_synth_1; Pseudouridylate synthase I; Uracil hydrolyase; tRNA pseudouridine synthase A; Pseudouridine synthase I complement(2504128..2504940) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761418 YP_005233428.1 CDS STMMW_23911 NC_016854.1 2504940 2505953 R pfam_scan;Pfam:PF01118; E()=1.1E-27;score=96.5;query6- 119;description=Semialdhyde_dh; pfam_scan;Pfam:PF02774; E()=5.5E-36;score=123.6;query 141-317;description=Semialdhyde_dhC; putative semialdehyde dehydrogenase complement(2504940..2505953) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761419 YP_005233429.1 CDS STMMW_23921 NC_016854.1 2506021 2507157 R pfam_scan;Pfam:PF02826; E()=4.0E-30;score=104.4;query 109-246;description=2-Hacid_dh_C; pfam_scan;Pfam:PF00389; E()=1.3E-16;score=60.3;query9-280;description=2-Hacid_dh; erythronate-4-phosphate dehydrogenase complement(2506021..2507157) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761420 YP_005233430.1 CDS STMMW_23931 NC_016854.1 2507261 2508262 D tmhmm; query 1-334; Div protein 2507261..2508262 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761421 YP_005233431.1 CDS STMMW_23941 NC_016854.1 2508259 2509437 R pfam_scan;Pfam:PF07690; E()=2.0E-19;score=69.8;query20-248;description=MFS_1; tmhmm; query 1-393; putative transmembrane transporter complement(2508259..2509437) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761422 YP_005233432.1 CDS STMMW_23951 NC_016854.1 2509617 2509991 R putative bacteriophage protein complement(2509617..2509991) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761423 YP_005233433.1 CDS STMMW_23961 NC_016854.1 2510164 2510412 D pfam_scan;Pfam:PF01381; E()=3.8E-5;score=23.0;query 13-63;description=HTH_3; putative DNA-binding protein 2510164..2510412 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761424 YP_005233434.1 CDS STMMW_23971 NC_016854.1 2510581 2510949 D hypothetical protein 2510581..2510949 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761425 YP_005233435.1 CDS STMMW_23981 NC_016854.1 2510949 2511467 D Signal peptide; signalp; query 1-25;cleavage_site_probability=0.546; 0.967; putative lipoprotein 2510949..2511467 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761426 YP_005233436.1 CDS STMMW_23991 NC_016854.1 2511534 2512190 R pfam_scan;Pfam:PF02517; E()=1.0E-18;score=67.0;query119-210;description=Abi; tmhmm; query 1-219; hypothetical protein complement(2511534..2512190) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761427 YP_005233437.1 CDS STMMW_24001 NC_016854.1 2512288 2513502 R pfam_scan;Pfam:PF00109; E()=5.9E-38;score=130.2;query 2-246;description=ketoacyl-synt; pfam_scan;Pfam:PF02801; E()=3.4E-29;score=100.7;query 254-362;description=Ketoacyl-synt_C; 3-oxoacyl-ACP synthase complement(2512288..2513502) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761428 YP_005233438.1 CDS STMMW_24011 NC_016854.1 2513602 2515662 D pfam_scan;Pfam:PF01266; E()=2.6E-52;score=178.0;query 287-652;description=DAO; pfam_scan;Pfam:PF05430; E()=2.5E-51;score=171.9;query 138-264;description=DUF752; hypothetical protein 2513602..2515662 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761429 YP_005233439.1 CDS STMMW_24021 NC_016854.1 2515714 2515989 R pfam_scan;Pfam:PF08891; E()=2.4E-33;score=113.4;query 2-87;description=YfcL; hypothetical protein complement(2515714..2515989) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761430 YP_005233440.1 CDS STMMW_24031 NC_016854.1 2516022 2516570 R pfam_scan;Pfam:PF04315; E()=1.1E-79;score=265.3;query 13-177;description=DUF462; hypothetical protein complement(2516022..2516570) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761431 YP_005233441.1 CDS STMMW_24041 NC_016854.1 2516570 2517379 R pfam_scan;Pfam:PF01925; E()=4.0E-48;score=163.7;query 18-253;description=DUF81; tmhmm; query 1-270; hypothetical protein complement(2516570..2517379) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761432 YP_005233442.1 CDS STMMW_24051 NC_016854.1 2517379 2518203 R pfam_scan;Pfam:PF03411; E()=3.2E-134;score=444.8;query 35-273;description=Peptidase_M74; penicillin-insensitive murein endopeptidase complement(2517379..2518203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761433 YP_005233443.1 CDS STMMW_24061 NC_016854.1 2518207 2519292 R pfam_scan;Pfam:PF01264; E()=3.9E-149;score=496.0;query 10-346;description=Chorismate_synt; chorismate synthase; 5-enolpyruvylshikimate-3-phosphate phospholyase complement(2518207..2519292) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761434 YP_005233444.1 CDS STMMW_24071 NC_016854.1 2519328 2520260 R pfam_scan;Pfam:PF05175; E()=1.3E-18;score=66.6;query133-260;description=MTS; hypothetical protein complement(2519328..2520260) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761435 YP_005233445.1 CDS STMMW_24081 NC_016854.1 2520426 2520977 D pfam_scan;Pfam:PF01713; E()=5.5E-19;score=67.8;query98-172;description=Smr; hypothetical protein 2520426..2520977 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761436 YP_005233446.1 CDS STMMW_24091 NC_016854.1 2521077 2521562 R pfam_scan;Pfam:PF00300; E()=6.7E-11;score=42.2;query2-74;description=PGAM; phosphohistidine phosphatase complement(2521077..2521562) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761437 YP_005233447.1 CDS STMMW_24101 NC_016854.1 2521771 2523918 R pfam_scan;Pfam:PF00378; E()=4.5E-50;score=169.0;query 18-190;description=ECH; pfam_scan;Pfam:PF00725; E()=2.1E-29;score=101.2;query 492-586;description=3HCDH; pfam_scan;Pfam:PF02737; E()=3.7E-58;score=196.1;query 311-489;description=3HCDH_N; putative fatty acid oxidation complex alpha subunit complement(2521771..2523918) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761438 YP_005233448.1 CDS STMMW_24111 NC_016854.1 2523918 2525228 R pfam_scan;Pfam:PF00108; E()=4.6E-63;score=212.4;query 14-288;description=Thiolase_N; pfam_scan;Pfam:PF02803; E()=3.9E-34;score=116.8;query 296-434;description=Thiolase_C; putative 3-ketoacyl-CoA thiolase complement(2523918..2525228) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761439 YP_005233449.1 CDS STMMW_24121 NC_016854.1 2525406 2525690 R pfam_scan;Pfam:PF04175; E()=4.0E-32;score=110.1;query 15-94;description=DUF406; hypothetical protein complement(2525406..2525690) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761440 YP_005233450.1 CDS STMMW_24131 NC_016854.1 2526055 2527368 D pfam_scan;Pfam:PF03349; E()=3.5E-148;score=493.3;query 19-437;description=Toluene_X; long-chain fatty acid transport protein 2526055..2527368 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761441 YP_005233451.1 CDS STMMW_24141 NC_016854.1 2527429 2528184 R pfam_scan;Pfam:PF04333; E()=4.5E-81;score=270.9;query 25-225;description=VacJ; VacJ lipoprotein complement(2527429..2528184) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761442 YP_005233452.1 CDS STMMW_24151 NC_016854.1 2528473 2529414 D pfam_scan;Pfam:PF01226; E()=1.0E-55;score=188.1;query 42-282;description=Form_Nir_trans; tmhmm; query 1-314; hypothetical protein 2528473..2529414 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761443 YP_005233453.1 CDS STMMW_24161 NC_016854.1 2529721 2530659 R pfam_scan;Pfam:PF01278; E()=9.8E-149;score=493.6;query 26-312;description=Omptin; outer membrane protease E complement(2529721..2530659) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761444 YP_005233454.1 CDS STMMW_24171 NC_016854.1 2530927 2532174 R pfam_scan;Pfam:PF00158; E()=3.0E-7;score=30.0;query 142-199;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=2.2E-12;score=45.9;query366-406;description=HTH_8; pfam_scan;Pfam:PF00072; E()=3.5E-27;score=94.3;query8- 115;description=Response_reg; phosphoglycerate transport system transcriptional regulatory protein PgtA complement(2530927..2532174) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761445 YP_005233455.1 CDS STMMW_24181 NC_016854.1 2532164 2534170 R pfam_scan;Pfam:PF02518; E()=1.2E-19;score=69.7;query557-660;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.5E-7;score=30.9;query 450-512;description=HisKA; tmhmm; query 1-669; phosphoglycerate transport system sensor protein PgtB complement(2532164..2534170) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761446 YP_005233456.1 CDS STMMW_24191 NC_016854.1 2534167 2535360 R pfam_scan;Pfam:PF01547; E()=1.3E-6;score=27.8;query 46-259;description=SBP_bac_1; phosphoglycerate transport regulatory protein PgtC precursor complement(2534167..2535360) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761447 YP_005233457.1 CDS STMMW_24201 NC_016854.1 2535796 2537187 D pfam_scan;Pfam:PF07690; E()=2.0E-50;score=171.7;query 34-401;description=MFS_1; tmhmm; query 1-464; phosphoglycerate transporter protein 2535796..2537187 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761448 YP_005233458.1 CDS STMMW_24231 NC_016854.1 2537463 2537705 R pfam_scan;Pfam:PF10810; E()=1.4E-47;score=159.0;query 1-80;description=DUF2545; tmhmm; query 1-81; membrane protein complement(2537463..2537705) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761449 YP_005233459.1 CDS STMMW_24241 NC_016854.1 2538227 2539147 D pfam_scan;Pfam:PF03279; E()=7.5E-113;score=375.9;query 5-296;description=Lip_A_acyltrans; tmhmm; query 1-307; putative acyltransferase 2538227..2539147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761450 YP_005233460.1 CDS STMMW_24251 NC_016854.1 2539671 2540909 R pfam_scan;Pfam:PF00155; E()=3.8E-66;score=223.2;query 37-387;description=Aminotran_1_2; putative aminotransferase complement(2539671..2540909) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761451 YP_005233461.1 CDS STMMW_24261 NC_016854.1 2541251 2541397 R hypothetical protein complement(2541251..2541397) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761452 YP_005233462.1 CDS STMMW_24271 NC_016854.1 2541630 2542595 R pfam_scan;Pfam:PF02685; E()=1.5E-125;score=417.7;query 6-315;description=Glucokinase; glucokinase; Glucose kinase complement(2541630..2542595) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761453 YP_005233463.1 CDS STMMW_24281 NC_016854.1 2542799 2544034 D pfam_scan;Pfam:PF00654; E()=3.6E-24;score=85.0;query67- 365;description=Voltage_CLC; tmhmm; query 1-412; hypothetical protein 2542799..2544034 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761454 YP_005233464.1 CDS STMMW_24291 NC_016854.1 2544054 2545706 R pfam_scan;Pfam:PF00205; E()=1.2E-16;score=59.9;query202- 318;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=3.0E-34;score=117.8;query 6-176;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=2.3E-18;score=66.2;query392- 526;description=TPP_enzyme_C; putative decarboxylase complement(2544054..2545706) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761455 YP_005233465.1 CDS STMMW_24301 NC_016854.1 2545886 2546884 D pfam_scan;Pfam:PF00248; E()=1.0E-71;score=240.7;query 28-328;description=Aldo_ket_red; putative ion-channel protein 2545886..2546884 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761456 YP_005233466.1 CDS STMMW_24311 NC_016854.1 2546998 2547324 D pfam_scan;Pfam:PF10697; E()=5.8E-33;score=112.1;query 6-106;description=DUF2502; tmhmm; query 1-109; hypothetical protein 2546998..2547324 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761457 YP_005233467.1 CDS STMMW_24321 NC_016854.1 2547385 2548626 R pfam_scan;Pfam:PF01566; E()=3.6E-134;score=446.8;query 38-384;description=Nramp; tmhmm; query 1-414; manganese transport protein mntH complement(2547385..2548626) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761458 YP_005233468.1 CDS STMMW_24331 NC_016854.1 2548969 2550171 D pfam_scan;Pfam:PF07670; E()=5.2E-13;score=49.0;query91-191;description=Gate; pfam_scan;Pfam:PF07662; E()=2.0E-69;score=232.7;query 193-399;description=Nucleos_tra2_C; pfam_scan;Pfam:PF01773; E()=1.3E-22;score=79.1;query9- 82;description=Nucleos_tra2_N; tmhmm; query 1-401; nucleoside permease NupC 2548969..2550171 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761459 YP_005233469.1 CDS STMMW_24341 NC_016854.1 2550224 2552413 R pfam_scan;Pfam:PF00563; E()=6.6E-60;score=202.1;query 493-724;description=EAL; pfam_scan;Pfam:PF00990; E()=1.1E-4;score=21.5;query 326-444;description=GGDEF; pfam_scan;Pfam:PF05231; E()=6.2E-54;score=182.8;query 16-315;description=MASE1; tmhmm; query 1-730; hypothetical protein complement(2550224..2552413) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761460 YP_005233470.1 CDS STMMW_24351 NC_016854.1 2553019 2553381 D pfam_scan;Pfam:PF07037; E()=1.9E-50;score=169.9;query 6-119;description=DUF1323; hypothetical protein 2553019..2553381 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761461 YP_005233471.1 CDS STMMW_24361 NC_016854.1 2553383 2553775 D pfam_scan;Pfam:PF07037; E()=6.8E-54;score=181.1;query 8-128;description=DUF1323; hypothetical protein 2553383..2553775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761462 YP_005233472.1 CDS STMMW_24371 NC_016854.1 2553829 2555244 R pfam_scan;Pfam:PF00749; E()=1.9E-124;score=414.0;query 2-305;description=tRNA-synt_1c; Glutamate--tRNA ligase; glutamyl-tRNA synthetase; GluRS complement(2553829..2555244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761463 YP_005233473.1 CDS STMMW_24381 NC_016854.1 2556060 2556944 R pfam_scan;Pfam:PF00126; E()=1.5E-20;score=72.4;query9-68;description=HTH_1; pfam_scan;Pfam:PF03466; E()=8.3E-39;score=132.4;query 93-292;description=LysR_substrate; xanthosine operon transcriptional regulator complement(2556060..2556944) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761464 YP_005233474.1 CDS STMMW_24391 NC_016854.1 2557213 2558469 R pfam_scan;Pfam:PF03825; E()=5.5E-184;score=610.8;query 1-406;description=Nuc_H_symport; tmhmm; query 1-419; nucleoside permease complement(2557213..2558469) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761465 YP_005233475.1 CDS STMMW_24411 NC_016854.1 2558524 2559357 R pfam_scan;Pfam:PF01048; E()=1.6E-49;score=167.9;query 27-274;description=PNP_UDP_1; xanthosine phosphorylase complement(2558524..2559357) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761466 YP_005233476.1 CDS STMMW_24421 NC_016854.1 2559613 2560374 D pfam_scan;Pfam:PF03502; E()=2.4E-58;score=196.9;query 8-253;description=Channel_Tsx; hypothetical protein 2559613..2560374 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761467 YP_005233477.1 CDS STMMW_24431 NC_016854.1 2560436 2561362 R pfam_scan;Pfam:PF00126; E()=5.0E-21;score=73.9;query5-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.9E-45;score=153.5;query 90-293;description=LysR_substrate; putative transcriptional regulator complement(2560436..2561362) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761468 YP_005233478.1 CDS STMMW_24441 NC_016854.1 2561452 2562450 D pfam_scan;Pfam:PF01758; E()=1.3E-8;score=34.1;query 72-213;description=SBF; tmhmm; query 1-333; hypothetical protein 2561452..2562450 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761469 YP_005233479.1 CDS STMMW_24451 NC_016854.1 2562447 2562674 R hypothetical protein complement(2562447..2562674) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761470 YP_005233480.1 CDS STMMW_24461 NC_016854.1 2562667 2564682 R pfam_scan;Pfam:PF03120; E()=5.8E-35;score=118.2;query 321-400;description=DNA_ligase_OB; pfam_scan;Pfam:PF01653; E()=8.6E-133;score=441.6;query 4-318;description=DNA_ligase_aden; pfam_scan;Pfam:PF03119; E()=1.1E-9;score=37.4;query 407-434;description=DNA_ligase_ZBD; pfam_scan;Pfam:PF00633; E()=9.2E-5;score=21.1;query 534-563;description=HHH; pfam_scan;Pfam:PF00533; E()=1.2E-16;score=60.3;query595-668;description=BRCT; DNA ligase complement(2562667..2564682) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761471 YP_005233481.1 CDS STMMW_24471 NC_016854.1 2564754 2565791 R pfam_scan;Pfam:PF04354; E()=2.2E-52;score=175.7;query 209-337;description=ZipA_C; tmhmm; query 1-346; cell division protein; Cell division protein zipA complement(2564754..2565791) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761472 YP_005233482.1 CDS STMMW_24481 NC_016854.1 2565972 2566733 D pfam_scan;Pfam:PF04401; E()=6.2E-73;score=243.6;query 56-241;description=DUF540; tmhmm; query 1-254; putative sulfate transport protein CysZ 2565972..2566733 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761473 YP_005233483.1 CDS STMMW_24491 NC_016854.1 2566897 2567868 D pfam_scan;Pfam:PF00291; E()=3.8E-76;score=256.2;query 9-300;description=PALP; cysteine synthase A 2566897..2567868 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761474 YP_005233484.1 CDS STMMW_24501 NC_016854.1 2568252 2568509 D pfam_scan;Pfam:PF00381; E()=2.5E-31;score=107.0;query 1-83;description=PTS-HPr; phosphocarrier protein HPr 2568252..2568509 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761475 YP_005233485.1 CDS STMMW_24511 NC_016854.1 2568558 2570285 D pfam_scan;Pfam:PF05524; E()=2.1E-33;score=114.9;query 2-127;description=PEP-utilisers_N; pfam_scan;Pfam:PF00391; E()=7.9E-26;score=89.0;query151-223;description=PEP- utilizers; pfam_scan;Pfam:PF02896; E()=4.9E-131;score=435.7;query 250-541;description=PEP-utilizers_C; phosphoenolpyruvate-protein phosphotransferase 2568558..2570285 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761476 YP_005233486.1 CDS STMMW_24521 NC_016854.1 2570326 2570835 D pfam_scan;Pfam:PF00358; E()=5.9E-54;score=180.8;query 20-149;description=PTS_EIIA_1; PTS system glucose-specific transporter subunit IIA 2570326..2570835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761477 YP_005233487.1 CDS STMMW_24531 NC_016854.1 2570984 2571223 R hypothetical protein complement(2570984..2571223) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761478 YP_005233488.1 CDS STMMW_24541 NC_016854.1 2571220 2572086 R pfam_scan;Pfam:PF08543; E()=1.1E-22;score=80.3;query93- 271;description=Phos_pyr_kin; pyridoxine kinase complement(2571220..2572086) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761479 YP_005233489.1 CDS STMMW_24551 NC_016854.1 2572169 2573461 D pfam_scan;Pfam:PF00392; E()=6.9E-17;score=60.7;query7-69;description=GntR; pfam_scan;Pfam:PF00155; E()=2.3E-27;score=95.6;query108- 423;description=Aminotran_1_2; putative transcriptional regulator 2572169..2573461 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761480 YP_005233490.1 CDS STMMW_24561 NC_016854.1 2573476 2574195 D pfam_scan;Pfam:PF00117; E()=1.0E-14;score=54.0;query42-184;description=GATase; putative amidotransferase 2573476..2574195 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761481 YP_005233491.1 CDS STMMW_24571 NC_016854.1 2574254 2574634 D Signal peptide; signalp; query 1-26;cleavage_site_probability=0.990; 1.000; hypothetical protein 2574254..2574634 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761482 YP_005233492.1 CDS STMMW_24581 NC_016854.1 2574647 2575186 D pfam_scan;Pfam:PF00912; E()=4.6E-11;score=41.8;query70-159;description=Transgly; tmhmm; query 1-180; hypothetical protein 2574647..2575186 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761483 YP_005233493.1 CDS STMMW_24591 NC_016854.1 2575317 2576228 R pfam_scan;Pfam:PF00291; E()=2.5E-70;score=237.1;query 5-281;description=PALP; cysteine synthase B complement(2575317..2576228) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761484 YP_005233494.1 CDS STMMW_24601 NC_016854.1 2576296 2577393 R pfam_scan;Pfam:PF00005; E()=4.3E-51;score=173.5;query 28-198;description=ABC_tran; sulfate transport ATP-binding protein CysA complement(2576296..2577393) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761485 YP_005233495.1 CDS STMMW_24611 NC_016854.1 2577383 2578258 R pfam_scan;Pfam:PF00528; E()=4.5E-14;score=51.9;query81- 268;description=BPD_transp_1; tmhmm; query 1-292; sulfate transport system permease CysW complement(2577383..2578258) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761486 YP_005233496.1 CDS STMMW_24621 NC_016854.1 2578258 2579091 R pfam_scan;Pfam:PF00528; E()=4.9E-26;score=90.9;query76- 274;description=BPD_transp_1; tmhmm; query 1-278; sulfate transport system permease protein CysT complement(2578258..2579091) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761487 YP_005233497.1 CDS STMMW_24631 NC_016854.1 2579091 2580107 R pfam_scan;Pfam:PF01547; E()=5.7E-18;score=65.2;query38-277;description=SBP_bac_1; thiosulfate-binding protein complement(2579091..2580107) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761488 YP_005233498.1 CDS STMMW_24641 NC_016854.1 2580265 2581056 R pfam_scan;Pfam:PF00106; E()=2.8E-32;score=111.6;query 7-172;description=adh_short; putative oxidoreductase complement(2580265..2581056) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761489 YP_005233499.1 CDS STMMW_24651 NC_016854.1 2581294 2582193 R pfam_scan;Pfam:PF04261; E()=1.0E-107;score=359.3;query 5-295;description=Dyp_perox; hypothetical protein complement(2581294..2582193) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761490 YP_005233500.1 CDS STMMW_24661 NC_016854.1 2582288 2582863 R pfam_scan;Pfam:PF06572; E()=4.5E-101;score=335.7;query 1-191;description=DUF1131; putative lipoprotein complement(2582288..2582863) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761491 YP_005233501.1 CDS STMMW_24671 NC_016854.1 2582925 2583374 R pfam_scan;Pfam:PF11143; E()=9.8E-50;score=167.8;query 6-147;description=DUF2919; hypothetical protein complement(2582925..2583374) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761492 YP_005233502.1 CDS STMMW_24681 NC_016854.1 2583361 2583786 R pfam_scan;Pfam:PF00583; E()=2.6E-18;score=65.4;query48- 124;description=Acetyltransf_1; putative acetyltransferase complement(2583361..2583786) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761493 YP_005233503.1 CDS STMMW_24691 NC_016854.1 2583999 2584868 D pfam_scan;Pfam:PF01520; E()=1.4E-52;score=178.0;query 59-273;description=Amidase_3; N-acetylmuramoyl-L-alanine amidase 2583999..2584868 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761494 YP_005233504.1 CDS STMMW_24701 NC_016854.1 2584871 2585770 D pfam_scan;Pfam:PF01218; E()=7.6E-152;score=503.8;query 7-299;description=Coprogen_oxidas; coprogen oxidase; coproporphyrinogen III oxidase; coproporphyrinogen III oxidase, aerobic; Coproporphyrinogenase 2584871..2585770 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761495 YP_005233505.1 CDS STMMW_24711 NC_016854.1 2585791 2586120 D tmhmm; query 1-110; hypothetical protein 2585791..2586120 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761496 YP_005233506.1 CDS STMMW_24721 NC_016854.1 2586249 2587526 D hypothetical protein 2586249..2587526 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761497 YP_005233507.1 CDS STMMW_24731 NC_016854.1 2587726 2588778 R pfam_scan;Pfam:PF00165; E()=5.9E-7;score=29.0;query 250-290;description=HTH_AraC; ethanolamine operon transcriptional regulator complement(2587726..2588778) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761498 YP_005233508.1 CDS STMMW_24741 NC_016854.1 2588826 2589320 R pfam_scan;Pfam:PF09339; E()=1.6E-4;score=21.2;query 112-155;description=HTH_IclR; pfam_scan;Pfam:PF00936; E()=2.5E-21;score=75.0;query3-79;description=BMC; ethanolamine utilization protein EutK complement(2588826..2589320) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761499 YP_005233509.1 CDS STMMW_24751 NC_016854.1 2589333 2589992 R pfam_scan;Pfam:PF00936; E()=7.6E-7;score=28.8;query 35-109;description=BMC; ethanolamine utilization protein EutL complement(2589333..2589992) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761500 YP_005233510.1 CDS STMMW_24761 NC_016854.1 2590002 2590898 R pfam_scan;Pfam:PF05985; E()=1.3E-81;score=273.2;query 64-296;description=EutC; ethanolamine ammonia-lyase light chain; Ethanolamine ammonia-lyase small subunit complement(2590002..2590898) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761501 YP_005233511.1 CDS STMMW_24771 NC_016854.1 2590917 2592278 R pfam_scan;Pfam:PF06751; E()=5.1E-233;score=772.7;query 11-452;description=EutB; ethanolamine ammonia-lyase heavy chain complement(2590917..2592278) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761502 YP_005233512.1 CDS STMMW_24781 NC_016854.1 2592290 2593693 R pfam_scan;Pfam:PF06277; E()=2.2E-169;score=563.6;query 5-465;description=EutA; putative ethanolamine utilization protein EutA complement(2592290..2593693) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761503 YP_005233513.1 CDS STMMW_24791 NC_016854.1 2593690 2594916 R pfam_scan;Pfam:PF04346; E()=2.6E-142;score=473.7;query 3-392;description=EutH; tmhmm; query 1-409; hypothetical protein complement(2593690..2594916) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761504 YP_005233514.1 CDS STMMW_24801 NC_016854.1 2595036 2596223 R pfam_scan;Pfam:PF00465; E()=1.3E-116;score=389.0;query 27-387;description=Fe-ADH; putative alchohol dehydrogenase complement(2595036..2596223) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761505 YP_005233515.1 CDS STMMW_24811 NC_016854.1 2596213 2597052 R pfam_scan;Pfam:PF02491; E()=1.4E-6;score=28.0;query 142-196;description=FtsA; putative ethanolamine utilization protein EutJ complement(2596213..2597052) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761506 YP_005233516.1 CDS STMMW_24821 NC_016854.1 2597063 2598466 R pfam_scan;Pfam:PF00171; E()=3.5E-31;score=107.5;query 34-421;description=Aldedh; putative aldehyde dehydrogenase complement(2597063..2598466) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761507 YP_005233517.1 CDS STMMW_24831 NC_016854.1 2598478 2598777 R pfam_scan;Pfam:PF03319; E()=3.0E-30;score=103.6;query 5-87;description=EutN_CcmL; ethanolamine utilization protein complement(2598478..2598777) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761508 YP_005233518.1 CDS STMMW_24841 NC_016854.1 2598878 2599168 R pfam_scan;Pfam:PF00936; E()=2.0E-26;score=91.3;query2-78;description=BMC; ethanolamine utilization protein complement(2598878..2599168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761509 YP_005233519.1 CDS STMMW_24851 NC_016854.1 2599209 2600225 R pfam_scan;Pfam:PF01515; E()=2.4E-119;score=397.7;query 2-320;description=PTA_PTB; putative phosphate acyltransferase complement(2599209..2600225) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761510 YP_005233520.1 CDS STMMW_24861 NC_016854.1 2600222 2601025 R pfam_scan;Pfam:PF01923; E()=2.0E-14;score=53.5;query95- 246;description=Cob_adeno_trans; putative cobalamin adenosyltransferase complement(2600222..2601025) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761511 YP_005233521.1 CDS STMMW_24871 NC_016854.1 2601022 2601711 R pfam_scan;Pfam:PF06249; E()=1.4E-67;score=225.9;query 81-228;description=EutQ; putative ethanolamine utilization protein EutQ complement(2601022..2601711) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761512 YP_005233522.1 CDS STMMW_24881 NC_016854.1 2601689 2602168 R pfam_scan;Pfam:PF10662; E()=2.4E-29;score=101.3;query 1-143;description=PduV-EutP; putative ethanolamine utilization protein complement(2601689..2602168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761513 YP_005233523.1 CDS STMMW_24891 NC_016854.1 2602181 2602516 R pfam_scan;Pfam:PF00936; E()=8.8E-15;score=54.1;query40-106;description=BMC; putative ethanolamine utilization protein EutS complement(2602181..2602516) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761514 YP_005233524.1 CDS STMMW_24901 NC_016854.1 2602997 2603455 R pfam_scan;Pfam:PF01797; E()=6.0E-40;score=135.3;query 12-129;description=Transposase_17; transposase for insertion sequence element IS200 complement(2602997..2603455) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761515 YP_005233525.1 CDS STMMW_24911 NC_016854.1 2603645 2605924 R pfam_scan;Pfam:PF00390; E()=7.9E-33;score=113.1;query 19-161;description=malic; pfam_scan;Pfam:PF03949; E()=1.4E-71;score=240.5;query 163-401;description=Malic_M; pfam_scan;Pfam:PF01515; E()=3.1E-97;score=325.0;query 430-751;description=PTA_PTB; NADP-dependent malate dehydrogenase complement(2603645..2605924) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761516 YP_005233526.1 CDS STMMW_24921 NC_016854.1 2606196 2607146 D pfam_scan;Pfam:PF00923; E()=1.6E-96;score=322.2;query 13-310;description=Transaldolase; transaldolase A 2606196..2607146 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761517 YP_005233527.1 CDS STMMW_24931 NC_016854.1 2607166 2609166 D pfam_scan;Pfam:PF00456; E()=7.7E-169;score=560.2;query 3-333;description=Transketolase_N; pfam_scan;Pfam:PF02779; E()=2.8E-54;score=182.7;query 353-523;description=Transket_pyr; pfam_scan;Pfam:PF02780; E()=5.3E-9;score=35.4;query 548-654;description=Transketolase_C; transketolase 2607166..2609166 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761518 YP_005233528.1 CDS STMMW_24941 NC_016854.1 2609229 2609459 R hypothetical protein complement(2609229..2609459) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761519 YP_005233529.1 CDS STMMW_24951 NC_016854.1 2609588 2610631 R pfam_scan;Pfam:PF06674; E()=1.4E-104;score=349.7;query 15-347;description=DUF1176; tmhmm; query 1-348; hypothetical protein complement(2609588..2610631) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761520 YP_005233530.1 CDS STMMW_24961 NC_016854.1 2610757 2611332 R pfam_scan;Pfam:PF00293; E()=3.0E-14;score=52.6;query47-174;description=NUDIX; hypothetical protein complement(2610757..2611332) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761521 YP_005233531.1 CDS STMMW_24971 NC_016854.1 2611536 2612834 D pfam_scan;Pfam:PF00144; E()=6.7E-60;score=202.5;query 44-408;description=Beta-lactamase; hypothetical protein 2611536..2612834 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761522 YP_005233532.1 CDS STMMW_24981 NC_016854.1 2613283 2615244 R pfam_scan;Pfam:PF07992; E()=6.3E-21;score=74.7;query329- 629;description=Pyr_redox_2; pfam_scan;Pfam:PF00037; E()=1.5E-6;score=26.9;query 80-101;description=Fer4; putative oxidoreductase complement(2613283..2615244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761523 YP_005233533.1 CDS STMMW_24991 NC_016854.1 2615430 2617130 D pfam_scan;Pfam:PF00672; E()=9.2E-12;score=44.3;query156-223;description=HAMP; pfam_scan;Pfam:PF02518; E()=3.6E-14;score=52.1;query467-556;description=HATPase_c; pfam_scan;Pfam:PF07730; E()=6.8E-16;score=57.9;query361-424;description=HisKA_3; tmhmm; query 1-567; nitrate/nitrite sensor protein NarQ 2615430..2617130 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761524 YP_005233534.1 CDS STMMW_25001 NC_016854.1 2617315 2620428 D pfam_scan;Pfam:PF00873; E()=0.0;score=1447.9;query 1-1027;description=ACR_tran; tmhmm; query 1-1038; putative efflux pump 2617315..2620428 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761525 YP_005233535.1 CDS STMMW_25011 NC_016854.1 2621002 2621358 D pfam_scan;Pfam:PF03960; E()=4.9E-31;score=106.5;query 5-115;description=ArsC; hypothetical protein 2621002..2621358 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761526 YP_005233536.1 CDS STMMW_25021 NC_016854.1 2621362 2622489 D pfam_scan;Pfam:PF07687; E()=4.4E-30;score=103.0;query 175-282;description=M20_dimer; pfam_scan;Pfam:PF01546; E()=2.0E-43;score=148.4;query 62-371;description=Peptidase_M20; succinyl-diaminopimelate desuccinylase 2621362..2622489 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761527 YP_005233537.1 CDS STMMW_25031 NC_016854.1 2622744 2624762 R pfam_scan;Pfam:PF00583; E()=6.9E-5;score=22.5;query 458-509;description=Acetyltransf_1; pfam_scan;Pfam:PF08351; E()=5.3E-6;score=25.9;query 66-151;description=DUF1726; pfam_scan;Pfam:PF05127; E()=2.0E-39;score=134.7;query 197-337;description=DUF699; hypothetical protein complement(2622744..2624762) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761528 YP_005233538.1 CDS STMMW_25041 NC_016854.1 2624778 2625641 R pfam_scan;Pfam:PF04228; E()=8.3E-137;score=454.6;query 1-283;description=Zn_peptidase; tmhmm; query 1-288; hypothetical protein complement(2624778..2625641) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761529 YP_005233539.1 CDS STMMW_25051 NC_016854.1 2625772 2626485 R pfam_scan;Pfam:PF01259; E()=4.2E-78;score=261.9;query 4-234;description=SAICAR_synt; phosphoribosylaminoimidazolesuccinocarboxamide synthase; SAICAR synthetase complement(2625772..2626485) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761530 YP_005233540.1 CDS STMMW_25061 NC_016854.1 2626660 2627694 R pfam_scan;Pfam:PF06804; E()=1.2E-132;score=441.3;query 40-342;description=Lipoprotein_18; putative lipoprotein complement(2626660..2627694) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761531 YP_005233541.1 CDS STMMW_25071 NC_016854.1 2627711 2628589 R pfam_scan;Pfam:PF00701; E()=4.9E-122;score=405.9;query 1-290;description=DHDPS; dihydrodipicolinate synthase; DHDPS complement(2627711..2628589) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761532 YP_005233542.1 CDS STMMW_25081 NC_016854.1 2628735 2629307 D pfam_scan;Pfam:PF01842; E()=9.2E-5;score=22.2;query 10-52;description=ACT; glycine cleavage system transcriptional repressor 2628735..2629307 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761533 YP_005233543.1 CDS STMMW_25091 NC_016854.1 2629307 2629777 D pfam_scan;Pfam:PF00578; E()=9.7E-42;score=141.3;query 7-134;description=AhpC-TSA; bacterioferritin comigratory protein 2629307..2629777 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761534 YP_005233544.1 CDS STMMW_25101 NC_016854.1 2630364 2631452 R pfam_scan;Pfam:PF01594; E()=3.3E-84;score=282.2;query 27-352;description=UPF0118; hypothetical protein complement(2630364..2631452) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761535 YP_005233545.1 CDS STMMW_25111 NC_016854.1 2631639 2633102 D pfam_scan;Pfam:PF01435; E()=5.8E-33;score=113.5;query 91-264;description=Peptidase_M48; hypothetical protein 2631639..2633102 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761536 YP_005233546.1 CDS STMMW_25121 NC_016854.1 2633142 2633501 D pfam_scan;Pfam:PF03960; E()=1.4E-32;score=111.4;query 8-118;description=ArsC; putative arsenate reductase (arsenical pump modifier) 2633142..2633501 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761537 YP_005233547.1 CDS STMMW_25131 NC_016854.1 2633528 2634253 R pfam_scan;Pfam:PF00308; E()=3.5E-15;score=55.5;query26-219;description=Bac_DnaA; hypothetical protein complement(2633528..2634253) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761538 YP_005233548.1 CDS STMMW_25141 NC_016854.1 2634324 2635613 R pfam_scan;Pfam:PF00860; E()=4.5E-112;score=374.5;query 16-383;description=Xan_ur_permease; tmhmm; query 1-430; uracil permease (uracil transporter) complement(2634324..2635613) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761539 YP_005233549.1 CDS STMMW_25151 NC_016854.1 2636412 2637038 R pfam_scan;Pfam:PF00156; E()=8.2E-15;score=54.3;query63- 160;description=Pribosyltran; UPRTase; UPRTase. uracil phosphoribosyltransferase EC 2.4.2.9; UMP pyrophosphorylase complement(2636412..2637038) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761540 YP_005233550.1 CDS STMMW_25161 NC_016854.1 2637452 2638489 D pfam_scan;Pfam:PF00586; E()=5.0E-26;score=90.2;query43-142;description=AIRS; pfam_scan;Pfam:PF02769; E()=1.5E-39;score=134.6;query 177-339;description=AIRS_C; Phosphoribosyl-aminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase; AIR synthase 2637452..2638489 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761541 YP_005233551.1 CDS STMMW_25171 NC_016854.1 2638489 2639127 D pfam_scan;Pfam:PF00551; E()=2.9E-66;score=222.3;query 1-181;description=Formyl_trans_N; phosphoribosylglycinamidine myltransferase 2638489..2639127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761542 YP_005233552.1 CDS STMMW_25181 NC_016854.1 2639316 2641382 D pfam_scan;Pfam:PF02503; E()=1.4E-239;score=796.6;query 7-681;description=PP_kinase; Polyphosphoric acid kinase; polyphosphate kinase; ATP-polyphosphate phosphotransferase 2639316..2641382 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761543 YP_005233553.1 CDS STMMW_25191 NC_016854.1 2641387 2642928 D pfam_scan;Pfam:PF02541; E()=1.4E-105;score=352.6;query 26-308;description=Ppx-GppA; exopolyphosphatase 2641387..2642928 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761544 YP_005233554.1 CDS STMMW_25201 NC_016854.1 2642964 2645177 R pfam_scan;Pfam:PF00563; E()=1.7E-67;score=226.9;query 498-730;description=EAL; pfam_scan;Pfam:PF05231; E()=4.0E-56;score=190.0;query 16-320;description=MASE1; tmhmm; query 1-738; hypothetical protein complement(2642964..2645177) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761545 YP_005233555.1 CDS STMMW_25211 NC_016854.1 2645274 2645411 R hypothetical protein complement(2645274..2645411) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761546 YP_005233556.1 CDS STMMW_25221 NC_016854.1 2645482 2645721 R hypothetical protein complement(2645482..2645721) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761547 YP_005233557.1 CDS STMMW_25241 NC_016854.1 2645860 2646096 R inner membrane protein complement(2645860..2646096) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761548 YP_005233558.1 CDS STMMW_25251 NC_016854.1 2646322 2646651 D pfam_scan;Pfam:PF07377; E()=2.9E-33;score=113.9;query 6-108;description=DUF1493; hypothetical protein 2646322..2646651 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761549 YP_005233559.1 CDS STMMW_25261 NC_016854.1 2646671 2647027 R pfam_scan;Pfam:PF00665; E()=5.1E-25;score=87.7;query2-102;description=rve; putative transposase complement(2646671..2647027) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761550 YP_005233560.1 CDS STMMW_25271 NC_016854.1 2647184 2648761 R pfam_scan;Pfam:PF00117; E()=6.4E-43;score=146.0;query 11-200;description=GATase; pfam_scan;Pfam:PF02540; E()=7.0E-7;score=28.5;query 223-256;description=NAD_synthase; pfam_scan;Pfam:PF00958; E()=2.1E-43;score=145.8;query 432-524;description=GMP_synt_C; GMP synthase [glutamine-hydrolyzing]; GMP synthetase; glutamine amidotransferase; GMP synthase complement(2647184..2648761) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761551 YP_005233561.1 CDS STMMW_25281 NC_016854.1 2648831 2650297 R pfam_scan;Pfam:PF00571; E()=7.9E-22;score=77.3;query95-204;description=CBS; pfam_scan;Pfam:PF00478; E()=2.7E-156;score=519.6;query 7-473;description=IMPDH; inosine-5'-monophosphate dehydrogenase complement(2648831..2650297) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761552 YP_005233562.1 CDS STMMW_25291 NC_016854.1 2650458 2651807 D pfam_scan;Pfam:PF01336; E()=8.4E-12;score=44.4;query30-104;description=tRNA_anti; pfam_scan;Pfam:PF02601; E()=1.4E-85;score=286.7;query 126-442;description=Exonuc_VII_L; exodeoxyribonuclease VII large subunit; exodeoxyribonuclease large subunit; Exonuclease VII large subunit 2650458..2651807 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761553 YP_005233563.1 CDS STMMW_25301 NC_016854.1 2651969 2658088 R pfam_scan;Pfam:PF03797; E()=1.0E-45;score=155.7;query 1759-2024;description=Autotransporter; host colonisation factor (ShdA) complement(2651969..2658088) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761554 YP_005233564.1 CDS STMMW_25321 NC_016854.1 2666254 2671851 R pfam_scan;Pfam:PF05688; E()=2.4E-17;score=61.7;query213-259;description=DUF824; pfam_scan;Pfam:PF05689; E()=4.8E-52;score=175.7;query 282-460;description=DUF823; tmhmm; query 1-1866; putative exported protein (RatA) complement(2666254..2671851) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761556 YP_005233565.1 CDS STMMW_25331 NC_016854.1 2671971 2672930 R tmhmm; query 1-320; hypothetical protein complement(2671971..2672930) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761557 YP_005233566.1 CDS STMMW_25341 NC_016854.1 2672988 2675180 R Signal peptide; signalp; query 1-23;cleavage_site_probability=0.828; 1.000; intimin complement(2672988..2675180) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761558 YP_005233567.1 CDS STMMW_25351 NC_016854.1 2675526 2675747 R pfam_scan;Pfam:PF07191; E()=2.0E-32;score=109.8;query 2-70;description=DUF1407; hypothetical protein complement(2675526..2675747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761559 YP_005233568.1 CDS STMMW_25361 NC_016854.1 2675836 2677308 R pfam_scan;Pfam:PF01926; E()=2.5E-35;score=120.8;query 4-121;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=3.2E-17;score=62.4;query5-167;description=FeoB_N; putative GTP-binding protein; GTP-binding protein engA complement(2675836..2677308) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761560 YP_005233569.1 CDS STMMW_25371 NC_016854.1 2677427 2678605 R pfam_scan;Pfam:PF01011; E()=6.6E-8;score=31.2;query 70-104;description=PQQ; putative lipoprotein complement(2677427..2678605) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761561 YP_005233570.1 CDS STMMW_25381 NC_016854.1 2678616 2679236 R pfam_scan;Pfam:PF09976; E()=1.8E-15;score=55.5;query10-50;description=DUF2133; tmhmm; query 1-207; hypothetical protein complement(2678616..2679236) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761562 YP_005233571.1 CDS STMMW_25391 NC_016854.1 2679250 2680524 R pfam_scan;Pfam:PF00587; E()=3.8E-40;score=136.6;query 21-186;description=tRNA-synt_2b; pfam_scan;Pfam:PF03129; E()=6.1E-12;score=45.0;query331- 420;description=HGTP_anticodon; Histidine--tRNA ligase; histidyl-tRNA synthetase; HisRS complement(2679250..2680524) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761563 YP_005233572.1 CDS STMMW_25401 NC_016854.1 2680635 2681753 R pfam_scan;Pfam:PF04551; E()=3.4E-143;score=476.0;query 13-354;description=GcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(2680635..2681753) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761564 YP_005233573.1 CDS STMMW_25411 NC_016854.1 2681780 2682784 R pfam_scan;Pfam:PF01381; E()=9.1E-8;score=31.4;query 19-54;description=HTH_3; tmhmm; query 1-335; putative DNA-binding protein complement(2681780..2682784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761565 YP_005233574.1 CDS STMMW_25421 NC_016854.1 2683076 2684242 R pfam_scan;Pfam:PF04055; E()=3.9E-15;score=55.8;query124- 296;description=Radical_SAM; hypothetical protein complement(2683076..2684242) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761566 YP_005233575.1 CDS STMMW_25431 NC_016854.1 2684449 2684880 R pfam_scan;Pfam:PF00334; E()=5.5E-57;score=190.7;query 4-137;description=NDK; NDP kinase; Nucleoside-2-P kinase; nucleoside diphosphate kinase; NDK complement(2684449..2684880) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761567 YP_005233576.1 CDS STMMW_25441 NC_016854.1 2685001 2685864 R pfam_scan;Pfam:PF00037; E()=2.6E-7;score=29.3;query 46-68;description=Fer4; putative polyferredoxin complement(2685001..2685864) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761568 YP_005233577.1 CDS STMMW_25451 NC_016854.1 2685864 2686673 R pfam_scan;Pfam:PF04976; E()=8.3E-27;score=93.6;query1-266;description=DmsC; tmhmm; query 1-270; putative anaerobic reductase component complement(2685864..2686673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761569 YP_005233578.1 CDS STMMW_25461 NC_016854.1 2686666 2687295 R pfam_scan;Pfam:PF00037; E()=1.0E-8;score=33.8;query 105-126;description=Fer4; putative anaerobic reductase component complement(2686666..2687295) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761570 YP_005233579.1 CDS STMMW_25471 NC_016854.1 2687292 2689697 R pfam_scan;Pfam:PF00384; E()=4.3E-50;score=170.4;query 124-569;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=4.0E-6;score=26.3;query 64-121;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=2.2E-27;score=94.4;query682- 794;description=Molydop_binding; dimethyl sulfoxide reductase complement(2687292..2689697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761571 YP_005233580.1 CDS STMMW_25481 NC_016854.1 2689826 2692141 R pfam_scan;Pfam:PF00905; E()=5.1E-16;score=58.0;query304- 535;description=Transpeptidase; pfam_scan;Pfam:PF06832; E()=1.9E-17;score=62.8;query686-767;description=BiPBP_C; pfam_scan;Pfam:PF00912; E()=4.6E-56;score=188.3;query 52-226;description=Transgly; tmhmm; query 1-772; penicillin-binding protein 1C complement(2689826..2692141) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761572 YP_005233581.1 CDS STMMW_25491 NC_016854.1 2692142 2697076 R pfam_scan;Pfam:PF07703; E()=3.7E-30;score=104.6;query 751-898;description=A2M_N_2; pfam_scan;Pfam:PF01835; E()=4.2E-19;score=68.3;query380-471;description=A2M_N; putative lipoprotein complement(2692142..2697076) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761573 YP_005233582.1 CDS STMMW_25501 NC_016854.1 2697285 2698127 D pfam_scan;Pfam:PF00581; E()=1.7E-17;score=62.9;query9-128;description=Rhodanese; putative thiosulfate sulfurtransferase 2697285..2698127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761574 YP_005233583.1 CDS STMMW_25511 NC_016854.1 2698374 2699042 D hypothetical protein 2698374..2699042 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761575 YP_005233584.1 CDS STMMW_25521 NC_016854.1 2699611 2700396 R pfam_scan;Pfam:PF07179; E()=1.0E-135;score=450.5;query 4-261;description=SseB; SseB protein complement(2699611..2700396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761576 YP_005233585.1 CDS STMMW_25531 NC_016854.1 2700497 2701780 R pfam_scan;Pfam:PF00883; E()=1.8E-114;score=381.7;query 109-422;description=Peptidase_M17; Aminopeptidase B complement(2700497..2701780) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761577 YP_005233586.1 CDS STMMW_25541 NC_016854.1 2702027 2702227 R pfam_scan;Pfam:PF04384; E()=6.3E-32;score=108.9;query 3-66;description=DUF528; hypothetical protein complement(2702027..2702227) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761578 YP_005233587.1 CDS STMMW_25551 NC_016854.1 2702239 2702574 R pfam_scan;Pfam:PF00111; E()=4.8E-14;score=51.5;query14-92;description=Fer2; ferredoxin complement(2702239..2702574) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761579 YP_005233588.1 CDS STMMW_25561 NC_016854.1 2702576 2704426 R pfam_scan;Pfam:PF00012; E()=1.6E-199;score=663.6;query 22-599;description=HSP70; chaperone protein HscA; Hsc66. Chaperone protein hscA complement(2702576..2704426) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761580 YP_005233589.1 CDS STMMW_25571 NC_016854.1 2704439 2704954 R pfam_scan;Pfam:PF07743; E()=7.2E-22;score=77.0;query87-162;description=HSCB_C; pfam_scan;Pfam:PF00226; E()=3.9E-9;score=35.8;query 2-70;description=DnaJ; chaperone protein HscB complement(2704439..2704954) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761581 YP_005233590.1 CDS STMMW_25581 NC_016854.1 2705150 2705473 R pfam_scan;Pfam:PF01521; E()=5.3E-31;score=106.1;query 3-93;description=Fe-S_biosyn; hypothetical protein complement(2705150..2705473) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761582 YP_005233591.1 CDS STMMW_25591 NC_016854.1 2705502 2705888 R pfam_scan;Pfam:PF01592; E()=9.7E-57;score=190.2;query 2-126;description=NifU_N; NifU-like protein complement(2705502..2705888) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761583 YP_005233592.1 CDS STMMW_25601 NC_016854.1 2705916 2707130 R pfam_scan;Pfam:PF00266; E()=6.0E-91;score=304.6;query 5-368;description=Aminotran_5; putative L-cysteine desulfurase; cysteine desulfurase complement(2705916..2707130) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761584 YP_005233593.1 CDS STMMW_25611 NC_016854.1 2707311 2707805 R pfam_scan;Pfam:PF02082; E()=4.7E-36;score=123.0;query 1-118;description=Rrf2; hypothetical protein complement(2707311..2707805) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761585 YP_005233594.1 CDS STMMW_25621 NC_016854.1 2707965 2708696 R pfam_scan;Pfam:PF00588; E()=1.5E-27;score=95.8;query5- 154;description=SpoU_methylase; putative RNA methyltransferase complement(2707965..2708696) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761586 YP_005233595.1 CDS STMMW_25631 NC_016854.1 2708815 2709618 D pfam_scan;Pfam:PF00459; E()=1.2E-93;score=313.0;query 2-261;description=Inositol_P; extragenic suppressor protein SuhB 2708815..2709618 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761587 YP_005233596.1 CDS STMMW_25641 NC_016854.1 2709763 2710641 D pfam_scan;Pfam:PF00561; E()=6.7E-7;score=28.6;query 108-166;description=Abhydrolase_1; tmhmm; query 1-293; hypothetical protein 2709763..2710641 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761588 YP_005233597.1 CDS STMMW_25651 NC_016854.1 2710823 2711866 D anaerobic sulfite reductase subunit A 2710823..2711866 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761589 YP_005233598.1 CDS STMMW_25661 NC_016854.1 2711870 2712688 D pfam_scan;Pfam:PF00175; E()=1.8E-19;score=69.7;query116- 217;description=NAD_binding_1; pfam_scan;Pfam:PF10418; E()=7.3E-11;score=40.7;query235-265;description=DHODB_Fe- S_bind; pfam_scan;Pfam:PF00970; E()=2.8E-5;score=23.6;query 43-101;description=FAD_binding_6; anaerobic sulfite reductase subunit B 2711870..2712688 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761590 YP_005233599.1 CDS STMMW_25671 NC_016854.1 2712699 2713712 D pfam_scan;Pfam:PF03460; E()=1.6E-15;score=55.8;query24- 82;description=NIR_SIR_ferr; pfam_scan;Pfam:PF01077; E()=3.7E-23;score=81.4;query110-303;description=NIR_SIR; pfam_scan;Pfam:PF00037; E()=5.5E-6;score=25.1;query 177-194;description=Fer4; anaerobic sulfite reductase subunit C 2712699..2713712 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761591 YP_005233600.1 CDS STMMW_25681 NC_016854.1 2713713 2714699 R pfam_scan;Pfam:PF03824; E()=4.6E-62;score=209.3;query 72-315;description=NicO; tmhmm; query 1-329; putative inner membrane protein complement(2713713..2714699) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761592 YP_005233601.1 CDS STMMW_25691 NC_016854.1 2714690 2715328 R pfam_scan;Pfam:PF06226; E()=2.1E-71;score=239.3;query 8-211;description=DUF1007; tmhmm; query 1-213; hypothetical protein complement(2714690..2715328) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761593 YP_005233602.1 CDS STMMW_25701 NC_016854.1 2715454 2716731 D pfam_scan;Pfam:PF00874; E()=5.6E-6;score=25.9;query 132-216;description=PRD; stationary phase inducible protein CsiE 2715454..2716731 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761594 YP_005233603.1 CDS STMMW_25711 NC_016854.1 2716726 2717865 R pfam_scan;Pfam:PF07690; E()=3.7E-18;score=65.6;query9-317;description=MFS_1; tmhmm; query 1-380; putative 3-phenylpropionate permease complement(2716726..2717865) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761595 YP_005233604.1 CDS STMMW_25721 NC_016854.1 2718061 2719314 R pfam_scan;Pfam:PF00464; E()=2.1E-196;score=652.1;query 9-386;description=SHMT; Serine methylase; serine hydroxymethyltransferase; SHMT complement(2718061..2719314) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761596 YP_005233605.1 CDS STMMW_25731 NC_016854.1 2719639 2720829 D pfam_scan;Pfam:PF00042; E()=9.6E-15;score=53.9;query7-102;description=Globin; pfam_scan;Pfam:PF00175; E()=3.0E-14;score=52.8;query264- 372;description=NAD_binding_1; pfam_scan;Pfam:PF00970; E()=2.1E-13;score=49.7;query155- 252;description=FAD_binding_6; flavohemoprotein 2719639..2720829 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761597 YP_005233606.1 CDS STMMW_25741 NC_016854.1 2721011 2722555 D pfam_scan;Pfam:PF00486; E()=4.7E-17;score=60.8;query24- 100;description=Trans_reg_C; tmhmm; query 1-515; transcriptional activator cadC 2721011..2722555 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761598 YP_005233607.1 CDS STMMW_25751 NC_016854.1 2722916 2724247 D pfam_scan;Pfam:PF00324; E()=3.4E-24;score=84.6;query18- 383;description=AA_permease; tmhmm; query 1-444; cadaverine/lysine antiporter 2722916..2724247 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761599 YP_005233608.1 CDS STMMW_25761 NC_016854.1 2724330 2726474 D pfam_scan;Pfam:PF03711; E()=2.7E-54;score=182.3;query 570-703;description=OKR_DC_1_C; pfam_scan;Pfam:PF01276; E()=1.7E-199;score=662.6;query 130-545;description=OKR_DC_1; pfam_scan;Pfam:PF03709; E()=1.7E-25;score=88.7;query14-124;description=OKR_DC_1_N; lysine decarboxylase 2724330..2726474 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761600 YP_005233609.1 CDS STMMW_25771 NC_016854.1 2726530 2727990 D pfam_scan;Pfam:PF00854; E()=2.0E-73;score=247.5;query 76-421;description=PTR2; tmhmm; query 1-487; putative transmembrane transport protein 2726530..2727990 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761601 YP_005233610.1 CDS STMMW_25781 NC_016854.1 2728039 2728377 R pfam_scan;Pfam:PF00543; E()=1.8E-46;score=156.4;query 4-105;description=P-II; nitrogen regulatory protein P-II complement(2728039..2728377) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761602 YP_005233611.1 CDS STMMW_25791 NC_016854.1 2728454 2729791 R pfam_scan;Pfam:PF00158; E()=1.7E-75;score=252.0;query 137-303;description=Sigma54_activat; pfam_scan;Pfam:PF00072; E()=8.4E-33;score=112.4;query 10-118;description=Response_reg; putative transcriptional regulator complement(2728454..2729791) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761603 YP_005233612.1 CDS STMMW_25801 NC_016854.1 2729788 2730552 R Signal peptide; signalp; query 1-42;cleavage_site_probability=0.716; 0.780; hypothetical protein complement(2729788..2730552) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761604 YP_005233613.1 CDS STMMW_25811 NC_016854.1 2730554 2731996 R pfam_scan;Pfam:PF02518; E()=1.2E-23;score=82.5;query366-474;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=8.8E-17;score=60.3;query254-317;description=HisKA; tmhmm; query 1-481; putative sensor kinase protein complement(2730554..2731996) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761605 YP_005233614.1 CDS STMMW_25821 NC_016854.1 2732634 2736521 R pfam_scan;Pfam:PF00586; E()=5.7E-7;score=29.1;query 258-388;description=AIRS; pfam_scan;Pfam:PF02769; E()=1.4E-27;score=95.8;query432-589;description=AIRS_C; FGAMS; FGARAT; Formylglycinamide ribotide amidotransferase; Formylglycinamide ribotide synthetase; phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycineamide synthetase; FGAM synthase complement(2732634..2736521) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761606 YP_005233615.1 CDS STMMW_25831 NC_016854.1 2736777 2738321 D pfam_scan;Pfam:PF01464; E()=2.8E-27;score=94.1;query296-403;description=SLT; pfam_scan;Pfam:PF00497; E()=3.3E-25;score=88.7;query52-267;description=SBP_bac_3; tmhmm; query 1-515; hypothetical protein 2736777..2738321 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761607 YP_005233616.1 CDS STMMW_25841 NC_016854.1 2738372 2738923 R pfam_scan;Pfam:PF00383; E()=1.7E-31;score=107.8;query 18-116;description=dCMP_cyt_deam_1; hypothetical protein complement(2738372..2738923) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761608 YP_005233617.1 CDS STMMW_25851 NC_016854.1 2738948 2739583 R tmhmm; query 1-212; hypothetical protein complement(2738948..2739583) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761609 YP_005233618.1 CDS STMMW_25861 NC_016854.1 2739587 2740948 R pfam_scan;Pfam:PF00367; E()=5.3E-12;score=44.5;query8-42;description=PTS_EIIB; pfam_scan;Pfam:PF02378; E()=2.3E-35;score=121.8;query 117-391;description=PTS_EIIC; tmhmm; query 1-454; putative PTS system IIBC component complement(2739587..2740948) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761610 YP_005233619.1 CDS STMMW_25871 NC_016854.1 2740959 2741852 R pfam_scan;Pfam:PF01380; E()=8.0E-12;score=44.8;query116-208;description=SIS; putative phophosugar binding protein complement(2740959..2741852) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761611 YP_005233620.1 CDS STMMW_25881 NC_016854.1 2741968 2742816 D pfam_scan;Pfam:PF01380; E()=7.2E-32;score=109.6;query 128-257;description=SIS; pfam_scan;Pfam:PF01418; E()=2.1E-34;score=117.3;query 1-110;description=HTH_6; putative transcriptional regulator 2741968..2742816 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761612 YP_005233621.1 CDS STMMW_25891 NC_016854.1 2742855 2743721 R pfam_scan;Pfam:PF02558; E()=1.7E-34;score=118.5;query 1-134;description=ApbA; pfam_scan;Pfam:PF08546; E()=4.0E-34;score=116.8;query 160-286;description=ApbA_C; putative oxidoreductase complement(2742855..2743721) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761613 YP_005233622.1 CDS STMMW_25901 NC_016854.1 2743794 2744990 R pfam_scan;Pfam:PF07690; E()=2.3E-34;score=118.9;query 18-329;description=MFS_1; tmhmm; query 1-399; putative transmembrane transport protein complement(2743794..2744990) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761614 YP_005233623.1 CDS STMMW_25911 NC_016854.1 2745106 2746032 D pfam_scan;Pfam:PF00126; E()=2.6E-17;score=62.1;query3-61;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.4E-32;score=112.1;query 87-285;description=LysR_substrate; putative transcriptional regulator 2745106..2746032 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761615 YP_005233624.1 CDS STMMW_25921 NC_016854.1 2746070 2746330 D pfam_scan;Pfam:PF00037; E()=2.6E-6;score=26.1;query 6-25;description=Fer4; putative ferredoxin 2746070..2746330 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761616 YP_005233625.1 CDS STMMW_25931 NC_016854.1 2746442 2746822 R pfam_scan;Pfam:PF01648; E()=5.9E-15;score=54.7;query6-72;description=ACPS; Holo-ACP synthase; Holo-[acyl-carrier-protein] synthase; holo-(acyl-carrier-protein) synthase; 4'-phosphopantetheinyl transferase acpS complement(2746442..2746822) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761617 YP_005233626.1 CDS STMMW_25941 NC_016854.1 2746822 2747553 R pfam_scan;Pfam:PF03740; E()=2.4E-106;score=354.0;query 5-238;description=PdxJ; putative pyridoxal phosphate biosynthetic protein; pyridoxal phosphate biosynthetic protein PdxJ; PNP synthase complement(2746822..2747553) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761618 YP_005233627.1 CDS STMMW_25951 NC_016854.1 2747565 2748293 R pfam_scan;Pfam:PF02565; E()=1.1E-23;score=82.8;query82-226;description=RecO_C; Recombination protein O; DNA repair protein RecO complement(2747565..2748293) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761619 YP_005233628.1 CDS STMMW_25961 NC_016854.1 2748305 2749210 R pfam_scan;Pfam:PF01926; E()=1.9E-29;score=101.8;query 11-127;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=2.9E-13;score=49.5;query11-174;description=FeoB_N; pfam_scan;Pfam:PF07650; E()=2.3E-10;score=39.7;query234-297;description=KH_2; GTP-binding protein era; GTP-binding protein complement(2748305..2749210) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761620 YP_005233629.1 CDS STMMW_25971 NC_016854.1 2749207 2749887 R pfam_scan;Pfam:PF00035; E()=5.9E-15;score=54.8;query156-223;description=dsrm; pfam_scan;Pfam:PF00636; E()=7.8E-26;score=90.1;query38- 127;description=Ribonuclease_3; ribonuclease III; RNase III complement(2749207..2749887) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761621 YP_005233630.1 CDS STMMW_25981 NC_016854.1 2750161 2751135 R pfam_scan;Pfam:PF00717; E()=3.8E-17;score=61.3;query86- 159;description=Peptidase_S24; pfam_scan;Pfam:PF10502; E()=2.3E-7;score=30.2;query 256-302;description=Peptidase_S26; tmhmm; query 1-325; signal peptidase I complement(2750161..2751135) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761622 YP_005233631.1 CDS STMMW_25991 NC_016854.1 2751152 2752951 R pfam_scan;Pfam:PF00679; E()=1.0E-18;score=66.6;query399-481;description=EFG_C; pfam_scan;Pfam:PF03144; E()=8.2E-8;score=32.0;query 205-275;description=GTP_EFTU_D2; pfam_scan;Pfam:PF06421; E()=4.0E-53;score=177.8;query 487-594;description=LepA_C; pfam_scan;Pfam:PF00009; E()=2.3E-52;score=177.0;query 2-181;description=GTP_EFTU; GTP-binding protein LepA complement(2751152..2752951) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761623 YP_005233632.1 CDS STMMW_26001 NC_016854.1 2753356 2754849 D leucine-rich repeat protein 2753356..2754849 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761624 YP_005233633.1 CDS STMMW_26011 NC_016854.1 2755712 2756257 D tmhmm; query 1-182; putative prophage protein 2755712..2756257 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761625 YP_005233634.1 CDS STMMW_26031 NC_016854.1 2757050 2757262 R methyltransferase domain; pfam_scan;Pfam:PF02796; E()=9.0E-6;score=25.5;query 34-65;description=HTH_7; putative prophage protein complement(2757050..2757262) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761626 YP_005233635.1 CDS STMMW_26041 NC_016854.1 2757426 2757596 D putative prophage protein 2757426..2757596 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761627 YP_005233636.1 CDS STMMW_26061 NC_016854.1 2757693 2758271 R pfam_scan;Pfam:PF02413; E()=1.4E-38;score=131.8;query 72-189;description=Caudo_TAP; Phage tail fiber assembly protein complement(2757693..2758271) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761628 YP_005233637.1 CDS STMMW_26071 NC_016854.1 2758261 2759085 R pfam_scan;Pfam:PF01661; E()=4.2E-18;score=65.2;query44-168;description=Macro; Phage tail assembly protein complement(2758261..2759085) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761629 YP_005233638.1 CDS STMMW_26081 NC_016854.1 2759082 2761454 R pfam_scan;Pfam:PF03406; E()=6.0E-19;score=67.0;query357- 399;description=Phage_fiber_2; pfam_scan;Pfam:PF08400; E()=4.9E-59;score=197.6;query 1-134;description=phage_tail_N; pfam_scan;Pfam:PF07484; E()=6.0E-6;score=25.6;query 610-656;description=Collar; prophage side tail fiber protein complement(2759082..2761454) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761630 YP_005233639.1 CDS STMMW_26082 NC_016854.1 2761508 2761750 R antitermination protein domain; putative prophage protein complement(2761508..2761750) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761631 YP_005233640.1 CDS STMMW_26091 NC_016854.1 2761789 2765151 R similar to protein involved in salmonella host recognition; pfam_scan;Pfam:PF09327; E()=8.3E-26;score=89.7;query844-924;description=DUF1983; phage tail protein, host specificity factor complement(2761789..2765151) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761632 YP_005233641.1 CDS STMMW_26101 NC_016854.1 2765213 2765860 R pfam_scan;Pfam:PF06805; E()=2.6E-77;score=258.4;query 19-203;description=Lambda_tail_I; tmhmm; query 1-216; prophage tail assembly protein complement(2765213..2765860) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761633 YP_005233642.1 CDS STMMW_26111 NC_016854.1 2765758 2766495 R pfam_scan;Pfam:PF00877; E()=2.9E-15;score=55.9;query109-222;description=NLPC_P60; prophage tail assembly protein complement(2765758..2766495) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761634 YP_005233643.1 CDS STMMW_26121 NC_016854.1 2766502 2767200 R pfam_scan;Pfam:PF05100; E()=6.1E-91;score=302.8;query 29-230;description=Phage_tail_L; prophage minor tail protein complement(2766502..2767200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761635 YP_005233644.1 CDS STMMW_26131 NC_016854.1 2767210 2767539 R pfam_scan;Pfam:PF05939; E()=2.5E-41;score=139.4;query 1-108;description=Phage_min_tail; phage minor tail protein complement(2767210..2767539) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761636 YP_005233645.1 CDS STMMW_26141 NC_016854.1 2767542 2770637 R pfam_scan;Pfam:PF09718; E()=1.2E-25;score=89.0;query807- 884;description=Tape_meas_lam_C; pfam_scan;Pfam:PF06791; E()=6.9E-57;score=191.8;query 228-426;description=TMP_2; tape measure protein complement(2767542..2770637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761637 YP_005233646.1 CDS STMMW_26151 NC_016854.1 2770609 2770923 R pfam_scan;Pfam:PF06223; E()=1.8E-53;score=178.6;query 2-103;description=Phage_tail_T; putative prophage protein complement(2770609..2770923) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761638 YP_005233647.1 CDS STMMW_26161 NC_016854.1 2770944 2771339 R pfam_scan;Pfam:PF06894; E()=3.9E-47;score=159.0;query 1-120;description=Phage_lambd_GpG; putative prophage protein complement(2770944..2771339) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761639 YP_005233648.1 CDS STMMW_26171 NC_016854.1 2771390 2772136 R pfam_scan;Pfam:PF02368; E()=1.6E-8;score=34.5;query 163-238;description=Big_2; putative prophage protein complement(2771390..2772136) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761640 YP_005233649.1 CDS STMMW_26181 NC_016854.1 2772144 2772545 R pfam_scan;Pfam:PF06141; E()=1.5E-66;score=222.0;query 1-133;description=Phage_tail_U; phage minor tail protein complement(2772144..2772545) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761641 YP_005233650.1 CDS STMMW_26191 NC_016854.1 2772534 2773784 D pfam_scan;Pfam:PF07282; E()=4.2E-24;score=83.1;query327- 395;description=Transposase_35; pfam_scan;Pfam:PF01385; E()=3.7E-57;score=193.3;query 46-312;description=Transposase_2; transposase (IS605 family) 2772534..2773784 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761642 YP_005233651.1 CDS STMMW_26201 NC_016854.1 2773833 2774411 R pfam_scan;Pfam:PF06763; E()=5.3E-89;score=296.7;query 1-192;description=Minor_tail_Z; prophage minor tail protein complement(2773833..2774411) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761643 YP_005233652.1 CDS STMMW_26211 NC_016854.1 2774439 2774822 R pfam_scan;Pfam:PF05354; E()=1.2E-57;score=192.4;query 1-117;description=Phage_attach; Head-tail attachment protein complement(2774439..2774822) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761644 YP_005233653.1 CDS STMMW_26221 NC_016854.1 2774833 2775192 R putative prophage protein complement(2774833..2775192) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761645 YP_005233654.1 CDS STMMW_26231 NC_016854.1 2775250 2776278 R pfam_scan;Pfam:PF03864; E()=7.6E-145;score=481.4;query 1-341;description=Phage_cap_E; phage major capsid protein complement(2775250..2776278) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761646 YP_005233655.1 CDS STMMW_26241 NC_016854.1 2776333 2776680 R pfam_scan;Pfam:PF02924; E()=1.5E-41;score=139.7;query 19-111;description=HDPD; putative head decoration protein complement(2776333..2776680) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761647 YP_005233656.1 CDS STMMW_26251 NC_016854.1 2776693 2778189 R pfam_scan;Pfam:PF01343; E()=8.3E-36;score=122.5;query 146-294;description=Peptidase_S49; capsid assembly protein complement(2776693..2778189) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761648 YP_005233657.1 CDS STMMW_26261 NC_016854.1 2778179 2779759 R pfam_scan;Pfam:PF05136; E()=5.0E-101;score=337.5;query 27-395;description=Phage_portal_2; phage portal protein complement(2778179..2779759) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761649 YP_005233658.1 CDS STMMW_26271 NC_016854.1 2779756 2779959 R pfam_scan;Pfam:PF02831; E()=4.0E-34;score=115.5;query 1-67;description=gpW; Head-to-tail joining protein complement(2779756..2779959) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761650 YP_005233659.1 CDS STMMW_26281 NC_016854.1 2779943 2781874 R pfam_scan;Pfam:PF05876; E()=3.3E-179;score=596.5;query 39-601;description=Terminase_GpA; phage terminase large subunit complement(2779943..2781874) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761651 YP_005233660.1 CDS STMMW_26291 NC_016854.1 2781846 2782391 R DNA circularisation protein domain; pfam_scan;Pfam:PF07471; E()=4.6E-83;score=276.4;query 1-163;description=Phage_Nu1; putative DNA packaging protein complement(2781846..2782391) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761652 YP_005233661.1 CDS STMMW_26301 NC_016854.1 2782678 2783079 D pre-peptidase domain; pfam_scan;Pfam:PF04151; E()=1.1E-7;score=31.8;query 48-111;description=PPC; putative prophage protein 2782678..2783079 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761653 YP_005233662.1 CDS STMMW_26311 NC_016854.1 2783315 2783788 R similar to a lambda lysis protein; pfam_scan;Pfam:PF03245; E()=6.3E-48;score=162.1;query 8-156;description=Phage_lysis; phage lysozyme complement(2783315..2783788) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761654 YP_005233663.1 CDS STMMW_26321 NC_016854.1 2783785 2784237 R pfam_scan;Pfam:PF00959; E()=5.5E-27;score=93.5;query33- 142;description=Phage_lysozyme; phage lysozyme complement(2783785..2784237) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761655 YP_005233664.1 CDS STMMW_26322 NC_016854.1 2784221 2784565 R pfam_scan;Pfam:PF05106; E()=5.8E-36;score=122.0;query 8-106;description=Phage_holin_3; tmhmm; query 1-115; putative bacteriophage holin complement(2784221..2784565) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761656 YP_005233665.1 CDS STMMW_26331 NC_016854.1 2784826 2785512 D pfam_scan;Pfam:PF07108; E()=3.3E-147;score=487.3;query 1-227;description=PipA; putative bacteriophage encoded virulence protein 2784826..2785512 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761657 YP_005233666.1 CDS STMMW_26341 NC_016854.1 2786422 2786985 R pfam_scan;Pfam:PF10543; E()=6.9E-26;score=89.5;query10-96;description=ORF6N; putative bacteriophage protein complement(2786422..2786985) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761658 YP_005233667.1 CDS STMMW_26361 NC_016854.1 2787258 2787935 R pfam_scan;Pfam:PF06323; E()=4.5E-109;score=362.3;query 1-220;description=Phage_antiter_Q; putative antitermination protein complement(2787258..2787935) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761659 YP_005233668.1 CDS STMMW_26371 NC_016854.1 2788069 2788680 R pfam_scan;Pfam:PF05766; E()=1.9E-63;score=212.6;query 1-202;description=NinG; putative prophage protein (ninG-related) complement(2788069..2788680) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761660 YP_005233669.1 CDS STMMW_26381 NC_016854.1 2788889 2789491 R pfam_scan;Pfam:PF07105; E()=8.8E-95;score=315.1;query 1-199;description=DUF1367; putative bacteriophage protein complement(2788889..2789491) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761661 YP_005233670.1 CDS STMMW_26391 NC_016854.1 2789526 2789774 R putative prophage protein complement(2789526..2789774) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761662 YP_005233671.1 CDS STMMW_26401 NC_016854.1 2789891 2790124 R pfam_scan;Pfam:PF06183; E()=1.3E-27;score=95.0;query13-77;description=DinI; putative prophage protein complement(2789891..2790124) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761663 YP_005233672.1 CDS STMMW_26411 NC_016854.1 2790367 2790999 R tmhmm; query 1-211; putative prophage protein complement(2790367..2790999) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761664 YP_005233673.1 CDS STMMW_26421 NC_016854.1 2791107 2791805 R pfam_scan;Pfam:PF04447; E()=1.4E-43;score=146.6;query 94-200;description=DUF550; putative prophage protein complement(2791107..2791805) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761665 YP_005233674.1 CDS STMMW_26431 NC_016854.1 2791819 2792514 R pfam_scan;Pfam:PF06992; E()=3.4E-25;score=88.5;query33- 202;description=Phage_lambda_P; phage replication protein complement(2791819..2792514) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761666 YP_005233675.1 CDS STMMW_26441 NC_016854.1 2792511 2793395 R pfam_scan;Pfam:PF04492; E()=2.9E-86;score=289.1;query 2-288;description=Phage_rep_O; phage replication protein complement(2792511..2793395) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761667 YP_005233676.1 CDS STMMW_26451 NC_016854.1 2793487 2793861 R pfam_scan;Pfam:PF05269; E()=2.0E-6;score=27.6;query 36-81;description=Phage_CII; transcriptional activator-regulatory protein cI complement(2793487..2793861) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761668 YP_005233677.1 CDS STMMW_26461 NC_016854.1 2794163 2794558 D pfam_scan;Pfam:PF01381; E()=6.3E-9;score=35.0;query 17-69;description=HTH_3; putative prophage protein 2794163..2794558 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761669 YP_005233678.1 CDS STMMW_26471 NC_016854.1 2794617 2795456 D pfam_scan;Pfam:PF01656; E()=1.0E-31;score=110.2;query 6-219;description=CbiA; putative prophage protein 2794617..2795456 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761670 YP_005233679.1 CDS STMMW_26481 NC_016854.1 2795449 2795835 D putative prophage protein 2795449..2795835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761671 YP_005233680.1 CDS STMMW_26491 NC_016854.1 2795835 2796497 D putative prophage protein 2795835..2796497 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761672 YP_005233681.1 CDS STMMW_26511 NC_016854.1 2796954 2797112 D mismatch repair protein domain; putative prophage protein 2796954..2797112 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761674 YP_005233682.1 CDS STMMW_26521 NC_016854.1 2797134 2797484 D membrane protein domain; putative prophage protein 2797134..2797484 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761675 YP_005233683.1 CDS STMMW_26531 NC_016854.1 2797611 2800538 D pfam_scan;Pfam:PF06630; E()=7.1E-80;score=266.2;query 3-194;description=Exonuc_VIII; exodeoxyribonuclease VIII 2797611..2800538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761676 YP_005233684.1 CDS STMMW_26532 NC_016854.1 2800549 2801658 D recT domain; pfam_scan;Pfam:PF03837; E()=2.2E-33;score=115.0;query 37-225;description=RecT; putative prophage protein 2800549..2801658 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761677 YP_005233685.1 CDS STMMW_26541 NC_016854.1 2801701 2801940 D putative prophage protein 2801701..2801940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761678 YP_005233686.1 CDS STMMW_26551 NC_016854.1 2801981 2802265 D putative prophage protein 2801981..2802265 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761679 YP_005233687.1 CDS STMMW_26561 NC_016854.1 2802243 2803472 R pfam_scan;Pfam:PF00589; E()=4.5E-17;score=62.2;query222- 377;description=Phage_integrase; phage integrase complement(2802243..2803472) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761680 YP_005233688.1 CDS STMMW_26571 NC_016854.1 2803970 2804449 R pfam_scan;Pfam:PF04246; E()=5.1E-42;score=142.2;query 8-141;description=RseC_MucC; tmhmm; query 1-160; sigma-E factor regulatory protein RseC complement(2803970..2804449) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761681 YP_005233689.1 CDS STMMW_26581 NC_016854.1 2804446 2805402 R pfam_scan;Pfam:PF03888; E()=1.2E-132;score=440.9;query 1-315;description=MucB_RseB; sigma-E factor regulatory protein RseB precursor complement(2804446..2805402) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761682 YP_005233690.1 CDS STMMW_26591 NC_016854.1 2805402 2806052 R pfam_scan;Pfam:PF03873; E()=6.8E-24;score=83.0;query131-186;description=RseA_C; pfam_scan;Pfam:PF03872; E()=2.6E-34;score=116.6;query 1-89;description=RseA_N; sigma-E factor negative regulatory protein complement(2805402..2806052) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761683 YP_005233691.1 CDS STMMW_26601 NC_016854.1 2806084 2806659 R pfam_scan;Pfam:PF08281; E()=3.2E-18;score=64.9;query130- 180;description=Sigma70_r4_2; pfam_scan;Pfam:PF04542; E()=9.6E-17;score=60.2;query25-92;description=Sigma70_r2; RNA polymerase sigma-E factor (sigma-24) complement(2806084..2806659) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761684 YP_005233692.1 CDS STMMW_26611 NC_016854.1 2807084 2808706 D pfam_scan;Pfam:PF02910; E()=1.7E-20;score=72.8;query441- 522;description=Succ_DH_flav_C; pfam_scan;Pfam:PF00890; E()=1.1E-108;score=363.2;query 10-392;description=FAD_binding_2; L-aspartate oxidase 2807084..2808706 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761685 YP_005233693.1 CDS STMMW_26621 NC_016854.1 2808691 2809428 R pfam_scan;Pfam:PF05175; E()=2.8E-13;score=49.3;query46-175;description=MTS; hypothetical protein complement(2808691..2809428) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761686 YP_005233694.1 CDS STMMW_26631 NC_016854.1 2809559 2810893 D pfam_scan;Pfam:PF00271; E()=4.3E-26;score=89.6;query267- 343;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=2.1E-56;score=190.3;query 28-198;description=DEAD; ATP-dependent RNA helicase SrmB 2809559..2810893 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761687 YP_005233695.1 CDS STMMW_26641 NC_016854.1 2810911 2811810 R pfam_scan;Pfam:PF00126; E()=2.2E-14;score=52.7;query3-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.3E-42;score=144.9;query 86-287;description=LysR_substrate; LysR family transcriptional regulator complement(2810911..2811810) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761688 YP_005233696.1 CDS STMMW_26651 NC_016854.1 2811913 2812500 D pfam_scan;Pfam:PF01810; E()=4.4E-15;score=55.1;query14-195;description=LysE; tmhmm; query 1-196; hypothetical protein 2811913..2812500 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761689 YP_005233697.1 CDS STMMW_26661 NC_016854.1 2812562 2812945 R pfam_scan;Pfam:PF01228; E()=1.8E-22;score=78.9;query15- 108;description=Gly_radical; hypothetical protein complement(2812562..2812945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761690 YP_005233698.1 CDS STMMW_26671 NC_016854.1 2813264 2813953 D pfam_scan;Pfam:PF03167; E()=8.0E-26;score=90.1;query55-210;description=UDG; uracil-DNA glycosylase; UDG 2813264..2813953 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761691 YP_005233699.1 CDS STMMW_26681 NC_016854.1 2814069 2815106 R pfam_scan;Pfam:PF08032; E()=5.9E-12;score=45.3;query110- 181;description=SpoU_sub_bind; pfam_scan;Pfam:PF00588; E()=4.8E-31;score=107.1;query 198-336;description=SpoU_methylase; putative RNA methyltransferase complement(2814069..2815106) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761692 YP_005233700.1 CDS STMMW_26691 NC_016854.1 2815310 2815729 D pfam_scan;Pfam:PF00085; E()=6.5E-29;score=99.3;query37- 137;description=Thioredoxin; thioredoxin 2 2815310..2815729 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761693 YP_005233701.1 CDS STMMW_26701 NC_016854.1 2815802 2816482 D pfam_scan;Pfam:PF03942; E()=8.0E-62;score=207.7;query 27-217;description=DTW; hypothetical protein 2815802..2816482 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761694 YP_005233702.1 CDS STMMW_26711 NC_016854.1 2816536 2819196 D pfam_scan;Pfam:PF00583; E()=6.2E-13;score=48.2;query791- 864;description=Acetyltransf_1; putative acyl-CoA synthetase 2816536..2819196 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761695 YP_005233703.1 CDS STMMW_26721 NC_016854.1 2819311 2820666 D pfam_scan;Pfam:PF00614; E()=3.3E-5;score=23.0;query 134-159;description=PLDc; CDP-diacylglycerol--serine O-phosphatidyltransferase 2819311..2820666 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761696 YP_005233704.1 CDS STMMW_26731 NC_016854.1 2820711 2821034 D pfam_scan;Pfam:PF10043; E()=4.3E-6;score=25.9;query 26-99;description=DUF2279; hypothetical protein 2820711..2821034 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761697 YP_005233705.1 CDS STMMW_26741 NC_016854.1 2821031 2822332 R pfam_scan;Pfam:PF00083; E()=1.9E-27;score=95.6;query25-222;description=Sugar_tr; tmhmm; query 1-434; alpha-ketoglutarate permease complement(2821031..2822332) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761698 YP_005233706.1 CDS STMMW_26751 NC_016854.1 2822436 2822891 R hypothetical protein complement(2822436..2822891) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761699 YP_005233707.1 CDS STMMW_26761 NC_016854.1 2828772 2831345 R pfam_scan;Pfam:PF10431; E()=5.3E-29;score=99.6;query766-850;description=ClpB_D2- small; pfam_scan;Pfam:PF00004; E()=9.4E-12;score=44.7;query203-335;description=AAA; pfam_scan;Pfam:PF02861; E()=4.1E-14;score=51.7;query17-68;description=Clp_N; pfam_scan;Pfam:PF07724; E()=1.5E-75;score=252.2;query 596-760;description=AAA_2; ClpB protein (heat shock protein f84.1) complement(2828772..2831345) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761704 YP_005233708.1 CDS STMMW_26771 NC_016854.1 2831475 2832206 R pfam_scan;Pfam:PF02578; E()=2.5E-79;score=265.2;query 20-242;description=Cu-oxidase_4; hypothetical protein complement(2831475..2832206) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761705 YP_005233709.1 CDS STMMW_26781 NC_016854.1 2832203 2833183 R pfam_scan;Pfam:PF01479; E()=3.1E-11;score=42.2;query18-65;description=S4; pfam_scan;Pfam:PF00849; E()=1.1E-32;score=113.0;query 92-242;description=PseudoU_synth_2; ftsH suppressor protein SfhB complement(2832203..2833183) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761706 YP_005233710.1 CDS STMMW_26791 NC_016854.1 2833315 2834052 D Signal peptide; signalp; query 1-24;cleavage_site_probability=0.476; 0.999; putative lipoprotein 2833315..2834052 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761707 YP_005233711.1 CDS STMMW_26801 NC_016854.1 2834324 2834662 D pfam_scan;Pfam:PF02482; E()=3.2E-29;score=100.7;query 3-93;description=Ribosomal_S30AE; putative sigma(54) modulation protein 2834324..2834662 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761708 YP_005233712.1 CDS STMMW_26811 NC_016854.1 2834913 2836073 D pfam_scan;Pfam:PF01817; E()=5.2E-21;score=74.4;query11-90;description=CM_2; pfam_scan;Pfam:PF00800; E()=1.9E-61;score=206.6;query 106-286;description=PDT; chorismate mutase-P/prephenate dehydratase 2834913..2836073 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761709 YP_005233713.1 CDS STMMW_26821 NC_016854.1 2836034 2836942 R pfam_scan;Pfam:PF08450; E()=3.3E-83;score=278.4;query 9-255;description=SGL; hypothetical protein complement(2836034..2836942) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761710 YP_005233714.1 CDS STMMW_26831 NC_016854.1 2837000 2838067 R pfam_scan;Pfam:PF02153; E()=5.2E-30;score=104.1;query 119-326;description=PDH; pfam_scan;Pfam:PF01817; E()=1.2E-16;score=60.5;query2-70;description=CM_2; chorismate mutase/prephenate dehydrogenase complement(2837000..2838067) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759562 YP_005233715.1 CDS STMMW_26841 NC_016854.1 2838131 2839201 R pfam_scan;Pfam:PF00793; E()=7.0E-99;score=329.4;query 41-340;description=DAHP_synth_1; phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive complement(2838131..2839201) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761711 YP_005233716.1 CDS STMMW_26851 NC_016854.1 2839641 2840159 D Signal peptide; signalp; query 1-23;cleavage_site_probability=0.999; 1.000; hypothetical protein 2839641..2840159 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761712 YP_005233717.1 CDS STMMW_26861 NC_016854.1 2840152 2841372 D pfam_scan;Pfam:PF00990; E()=2.0E-41;score=141.0;query 247-401;description=GGDEF; tmhmm; query 1-407; hypothetical protein 2840152..2841372 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761713 YP_005233718.1 CDS STMMW_26871 NC_016854.1 2841529 2841876 R pfam_scan;Pfam:PF01245; E()=2.7E-52;score=174.9;query 3-113;description=Ribosomal_L19; 50S ribosomal protein L19 complement(2841529..2841876) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761714 YP_005233719.1 CDS STMMW_26881 NC_016854.1 2841917 2842684 R pfam_scan;Pfam:PF01746; E()=1.3E-59;score=200.3;query 23-221;description=tRNA_m1G_MT; M1G-methyltransferase; tRNA [GM37] methyltransferase; tRNA(guanine-N1)methyltransferase; Guanine-N1--methyltransferase complement(2841917..2842684) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761715 YP_005233720.1 CDS STMMW_26891 NC_016854.1 2842729 2843277 R pfam_scan;Pfam:PF01782; E()=1.1E-27;score=95.6;query15-97;description=RimM; pfam_scan;Pfam:PF05239; E()=4.5E-14;score=51.8;query104-181;description=PRC; 16S rRNA processing protein complement(2842729..2843277) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761716 YP_005233721.1 CDS STMMW_26901 NC_016854.1 2843296 2843544 R pfam_scan;Pfam:PF00886; E()=1.0E-25;score=88.8;query8- 68;description=Ribosomal_S16; 30S ribosomal protein S16 complement(2843296..2843544) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761717 YP_005233722.1 CDS STMMW_26911 NC_016854.1 2843858 2845219 R pfam_scan;Pfam:PF02881; E()=2.6E-18;score=65.8;query5-84;description=SRP54_N; pfam_scan;Pfam:PF00448; E()=5.7E-78;score=260.6;query 100-296;description=SRP54; pfam_scan;Pfam:PF02978; E()=5.1E-38;score=128.9;query 329-427;description=SRP_SPB; signal recognition particle protein complement(2843858..2845219) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761718 YP_005233723.1 CDS STMMW_26921 NC_016854.1 2845385 2846176 D pfam_scan;Pfam:PF01578; E()=3.1E-39;score=134.2;query 36-261;description=Cytochrom_C_asm; tmhmm; query 1-264; hypothetical protein 2845385..2846176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761719 YP_005233724.1 CDS STMMW_26931 NC_016854.1 2846283 2847482 D pfam_scan;Pfam:PF01595; E()=1.7E-48;score=164.1;query 1-154;description=DUF21; pfam_scan;Pfam:PF00571; E()=1.4E-12;score=47.4;query179-296;description=CBS; pfam_scan;Pfam:PF03471; E()=3.9E-20;score=70.8;query314-389;description=CorC_HlyC; tmhmm; query 1-400; hypothetical protein 2846283..2847482 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761720 YP_005233725.1 CDS STMMW_26951 NC_016854.1 2848244 2848834 R pfam_scan;Pfam:PF01025; E()=1.4E-48;score=164.4;query 35-194;description=GrpE; heat shock protein GrpE (heat shock protein b25.3) (hsp24) complement(2848244..2848834) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761722 YP_005233726.1 CDS STMMW_26971 NC_016854.1 2848957 2849835 D pfam_scan;Pfam:PF01513; E()=2.7E-85;score=285.4;query 8-271;description=NAD_kinase; hypothetical protein 2848957..2849835 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761723 YP_005233727.1 CDS STMMW_26981 NC_016854.1 2849921 2851582 D pfam_scan;Pfam:PF02463; E()=1.9E-15;score=56.5;query2-511;description=SMC_N; DNA repair protein 2849921..2851582 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761724 YP_005233728.1 CDS STMMW_26991 NC_016854.1 2851731 2852069 D pfam_scan;Pfam:PF04355; E()=1.4E-27;score=94.3;query35-104;description=SmpA_OmlA; small protein A 2851731..2852069 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761725 YP_005233729.1 CDS STMMW_27001 NC_016854.1 2852235 2852525 R pfam_scan;Pfam:PF03658; E()=1.8E-36;score=123.3;query 6-88;description=UPF0125; hypothetical protein complement(2852235..2852525) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761726 YP_005233730.1 CDS STMMW_27011 NC_016854.1 2852518 2852970 R pfam_scan;Pfam:PF03364; E()=3.9E-40;score=136.6;query 16-141;description=Polyketide_cyc; hypothetical protein complement(2852518..2852970) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761727 YP_005233731.1 CDS STMMW_27021 NC_016854.1 2853141 2853623 D pfam_scan;Pfam:PF01668; E()=1.1E-27;score=94.8;query13-77;description=SmpB; SsrA-binding protein; SsrA (tmRNA)-binding protein 2853141..2853623 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761728 YP_005233732.1 CDS STMMW_27031 NC_016854.1 2854237 2865711 D hypothetical protein 2854237..2865711 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761729 YP_005233733.1 CDS STMMW_27041 NC_016854.1 2865776 2867185 D pfam_scan;Pfam:PF02321; E()=1.7E-29;score=102.5;query 62-243;description=OEP; putative type I secretion protein 2865776..2867185 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761730 YP_005233734.1 CDS STMMW_27051 NC_016854.1 2867182 2869362 D pfam_scan;Pfam:PF00664; E()=5.4E-25;score=87.7;query171- 436;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=1.9E-38;score=132.1;query 511-680;description=ABC_tran; tmhmm; query 1-727; putative type I secretion protein, ATP-binding protein 2867182..2869362 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761731 YP_005233735.1 CDS STMMW_27061 NC_016854.1 2869370 2870533 D pfam_scan;Pfam:PF00529; E()=1.0E-12;score=47.9;query57-308;description=HlyD; tmhmm; query 1-388; putative type I secretion protein 2869370..2870533 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761732 YP_005233736.1 CDS STMMW_27081 NC_016854.1 2872381 2873019 D hypothetical protein 2872381..2873019 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761734 YP_005233737.1 CDS STMMW_27091 NC_016854.1 2873409 2874602 D pfam_scan;Pfam:PF02810; E()=3.0E-8;score=31.8;query 28-47;description=SEC-C; hypothetical protein 2873409..2874602 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761735 YP_005233738.1 CDS STMMW_27101 NC_016854.1 2874937 2875764 R hypothetical protein complement(2874937..2875764) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761736 YP_005233739.1 CDS STMMW_27111 NC_016854.1 2876215 2876430 D pfam_scan;Pfam:PF05930; E()=2.5E-19;score=68.3;query16-63;description=Phage_AlpA; hypothetical protein 2876215..2876430 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761737 YP_005233740.1 CDS STMMW_27121 NC_016854.1 2876466 2878535 D pfam_scan;Pfam:PF06048; E()=5.1E-111;score=369.7;query 130-413;description=DUF927; putative inner membrane protein 2876466..2878535 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761738 YP_005233741.1 CDS STMMW_27122 NC_016854.1 2878655 2878780 D hypothetical protein 2878655..2878780 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761739 YP_005233742.1 CDS STMMW_27131 NC_016854.1 2879038 2880321 D pfam_scan;Pfam:PF00005; E()=2.9E-8;score=33.6;query 25-402;description=ABC_tran; putative ATPase 2879038..2880321 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761740 YP_005233743.1 CDS STMMW_27141 NC_016854.1 2880318 2881184 D hypothetical protein 2880318..2881184 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761741 YP_005233744.1 CDS STMMW_27151 NC_016854.1 2881338 2881694 R pfam_scan;Pfam:PF01381; E()=1.1E-6;score=27.9;query 28-86;description=HTH_3; putative transcriptional regulator complement(2881338..2881694) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761742 YP_005233745.1 CDS STMMW_27161 NC_016854.1 2881789 2882073 D regulator for maltose metabolism 2881789..2882073 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761743 YP_005233746.1 CDS STMMW_27171 NC_016854.1 2882186 2882707 D pfam_scan;Pfam:PF03608; E()=1.5E-65;score=219.3;query 2-169;description=EII-GUT; tmhmm; query 1-174; glucitol/sorbitol permease IIC component 2882186..2882707 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761744 YP_005233747.1 CDS STMMW_27181 NC_016854.1 2882704 2883078 D pfam_scan;Pfam:PF03829; E()=1.8E-29;score=101.3;query 1-111;description=PTSIIA_gutA; putative PTS enzyme III glucitol 2882704..2883078 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761745 YP_005233748.1 CDS STMMW_27191 NC_016854.1 2883075 2884055 D pfam_scan;Pfam:PF03612; E()=2.5E-55;score=186.7;query 3-179;description=EIIBC-GUT_N; pfam_scan;Pfam:PF07663; E()=1.2E-44;score=149.5;query 234-326;description=EIIBC-GUT_C; tmhmm; query 1-327; glucitol/sorbitol-specific phosphotransferase enzyme IIB component 2883075..2884055 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761746 YP_005233749.1 CDS STMMW_27201 NC_016854.1 2884066 2885079 D pfam_scan;Pfam:PF02894; E()=3.4E-6;score=26.5;query 161-225;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=1.1E-31;score=109.0;query 4-122;description=GFO_IDH_MocA; putative dehydrogenase 2884066..2885079 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761747 YP_005233750.1 CDS STMMW_27211 NC_016854.1 2885374 2886576 D putative hexulose 6 phosphate synthase 2885374..2886576 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761748 YP_005233751.1 CDS STMMW_27231 NC_016854.1 2886650 2887285 R pfam_scan;Pfam:PF00215; E()=4.3E-34;score=117.4;query 1-203;description=OMPdecase; 3-hexulose-6-phosphate synthase complement(2886650..2887285) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761749 YP_005233752.1 CDS STMMW_27241 NC_016854.1 2887309 2887872 R pfam_scan;Pfam:PF01380; E()=2.5E-13;score=49.6;query33-131;description=SIS; 6-phospho 3-hexuloisomerase complement(2887309..2887872) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761750 YP_005233753.1 CDS STMMW_27251 NC_016854.1 2887872 2888714 R pfam_scan;Pfam:PF06560; E()=2.7E-70;score=234.8;query 32-215;description=GPI; putative glucose-6-phosphate isomerase complement(2887872..2888714) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761751 YP_005233754.1 CDS STMMW_27261 NC_016854.1 2888844 2890385 R pfam_scan;Pfam:PF00367; E()=2.9E-9;score=35.8;query 431-463;description=PTS_EIIB; pfam_scan;Pfam:PF02378; E()=9.6E-79;score=264.3;query 15-344;description=PTS_EIIC; tmhmm; query 1-514; PTS system glucose-specific transporter subunit IIBC complement(2888844..2890385) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761752 YP_005233755.1 CDS STMMW_27271 NC_016854.1 2890608 2892287 D pfam_scan;Pfam:PF00496; E()=9.8E-18;score=64.0;query164-478;description=SBP_bac_5; Putative solute-binding protein 2890608..2892287 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761753 YP_005233756.1 CDS STMMW_27281 NC_016854.1 2893404 2894279 D DNA-binding prophage protein 2893404..2894279 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761754 YP_005233757.1 CDS STMMW_27291 NC_016854.1 2894445 2896319 D putative inner membrane protein 2894445..2896319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761755 YP_005233758.1 CDS STMMW_27301 NC_016854.1 2896579 2897862 R tmhmm; query 1-428; putative inner membrane protein complement(2896579..2897862) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761756 YP_005233759.1 CDS STMMW_27321 NC_016854.1 2900051 2900317 R pfam_scan;Pfam:PF01527; E()=3.0E-23;score=81.3;query1- 80;description=Transposase_8; putative transposase complement(2900051..2900317) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761759 YP_005233760.1 CDS STMMW_27331 NC_016854.1 2900770 2901408 R hypothetical protein complement(2900770..2901408) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761760 YP_005233761.1 CDS STMMW_27341 NC_016854.1 2901405 2903387 R putative DNA/RNA helicase complement(2901405..2903387) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761761 YP_005233762.1 CDS STMMW_27351 NC_016854.1 2903666 2903965 D pfam_scan;Pfam:PF01527; E()=1.5E-10;score=40.8;query10- 87;description=Transposase_8; IS3 transposase 2903666..2903965 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761762 YP_005233763.1 CDS STMMW_27361 NC_016854.1 2903962 2904828 D pfam_scan;Pfam:PF00665; E()=4.0E-40;score=136.8;query 125-282;description=rve; putative IS3 transposase orfB 2903962..2904828 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761763 YP_005233764.1 CDS STMMW_27371 NC_016854.1 2905608 2906147 R pfam_scan;Pfam:PF03614; E()=5.3E-92;score=305.6;query 8-172;description=Flag1_repress; repressor of phase 1 flagellin gene complement(2905608..2906147) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761764 YP_005233765.1 CDS STMMW_27381 NC_016854.1 2906215 2907735 R pfam_scan;Pfam:PF00669; E()=3.2E-43;score=146.6;query 5-143;description=Flagellin_N; pfam_scan;Pfam:PF00700; E()=2.6E-26;score=91.1;query421- 505;description=Flagellin_C; pfam_scan;Pfam:PF08884; E()=1.6E-24;score=85.5;query197- 285;description=Flagellin_D3; flagellin complement(2906215..2907735) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761765 YP_005233766.1 CDS STMMW_27391 NC_016854.1 2907827 2908399 D pfam_scan;Pfam:PF02796; E()=6.5E-17;score=60.9;query139-182;description=HTH_7; pfam_scan;Pfam:PF00239; E()=1.4E-51;score=173.7;query 4-136;description=Resolvase; tmhmm; query 1-191; DNA-invertase hin 2907827..2908399 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761766 YP_005233767.1 CDS STMMW_27401 NC_016854.1 2909362 2910477 D pfam_scan;Pfam:PF03033; E()=1.6E-4;score=21.2;query 14-128;description=Glyco_transf_28; pfam_scan;Pfam:PF06722; E()=3.2E-27;score=94.3;query165-260;description=DUF1205; putative glycosyltransferase 2909362..2910477 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761767 YP_005233768.1 CDS STMMW_27411 NC_016854.1 2910558 2914211 D pfam_scan;Pfam:PF00664; E()=1.2E-24;score=86.6;query29- 296;description=ABC_membrane; pfam_scan;Pfam:PF00005; E()=1.9E-42;score=145.2;query 367-537;description=ABC_tran; tmhmm; query 1-1218; putative ABC transporter protein 2910558..2914211 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761768 YP_005233769.1 CDS STMMW_27421 NC_016854.1 2914321 2915565 D pfam_scan;Pfam:PF00756; E()=2.6E-54;score=183.9;query 189-410;description=Esterase; putative ferric enterochelin esterase 2914321..2915565 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761769 YP_005233770.1 CDS STMMW_27431 NC_016854.1 2915597 2916532 D pfam_scan;Pfam:PF00756; E()=2.8E-10;score=39.6;query54-193;description=Esterase; tmhmm; query 1-312; hypothetical protein 2915597..2916532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761770 YP_005233771.1 CDS STMMW_27441 NC_016854.1 2916574 2918754 R pfam_scan;Pfam:PF07715; E()=3.5E-30;score=103.9;query 51-165;description=Plug; pfam_scan;Pfam:PF00593; E()=1.5E-38;score=132.8;query 457-726;description=TonB_dep_Rec; TonB-dependent outer membrane siderophore receptor protein complement(2916574..2918754) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761771 YP_005233772.1 CDS STMMW_27451 NC_016854.1 2919280 2919612 R putative inner membrane protein complement(2919280..2919612) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761772 YP_005233773.1 CDS STMMW_27461 NC_016854.1 2919787 2920839 R pfam_scan;Pfam:PF00805; E()=2.6E-8;score=32.9;query 153-182;description=Pentapeptide; hypothetical protein complement(2919787..2920839) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761773 YP_005233774.1 CDS STMMW_27471 NC_016854.1 2920911 2921249 D hypothetical protein 2920911..2921249 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761774 YP_005233775.1 CDS STMMW_27481 NC_016854.1 2921358 2922287 D pfam_scan;Pfam:PF04393; E()=6.2E-96;score=320.3;query 24-305;description=DUF535; Virulence protein 2921358..2922287 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761775 YP_005233776.1 CDS STMMW_27491 NC_016854.1 2922580 2923476 D pfam_scan;Pfam:PF07395; E()=1.1E-124;score=414.2;query 35-295;description=Mig-14; putative transcriptional regulator 2922580..2923476 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761776 YP_005233777.1 CDS STMMW_27501 NC_016854.1 2924198 2925211 R pfam_scan;Pfam:PF03824; E()=1.4E-96;score=322.5;query 37-323;description=NicO; tmhmm; query 1-338; putative cation transporter complement(2924198..2925211) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761777 YP_005233778.1 CDS STMMW_27511 NC_016854.1 2925344 2926759 R pfam_scan;Pfam:PF08521; E()=8.5E-45;score=152.1;query 20-170;description=2CSK_N; pfam_scan;Pfam:PF02518; E()=8.3E-23;score=79.9;query358-464;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=2.0E-8;score=33.7;query 247-308;description=HisKA; tmhmm; query 1-472; putative two-component system sensor kinase complement(2925344..2926759) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761778 YP_005233779.1 CDS STMMW_27521 NC_016854.1 2926746 2927420 R pfam_scan;Pfam:PF00486; E()=2.5E-19;score=68.0;query144- 217;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=3.6E-27;score=94.3;query4- 112;description=Response_reg; transcriptional regulator complement(2926746..2927420) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761779 YP_005233780.1 CDS STMMW_27531 NC_016854.1 2927575 2928552 D pfam_scan;Pfam:PF03401; E()=7.2E-20;score=70.5;query60-313;description=Bug; hypothetical protein 2927575..2928552 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761780 YP_005233781.1 CDS STMMW_27541 NC_016854.1 2928564 2928998 D tmhmm; query 1-145; hypothetical protein 2928564..2928998 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761781 YP_005233782.1 CDS STMMW_27551 NC_016854.1 2929009 2930523 D pfam_scan;Pfam:PF01970; E()=3.6E-158;score=526.2;query 19-440;description=DUF112; tmhmm; query 1-505; hypothetical protein 2929009..2930523 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761782 YP_005233783.1 CDS STMMW_27561 NC_016854.1 2930817 2931803 D pfam_scan;Pfam:PF08943; E()=1.0E-147;score=490.4;query 23-318;description=CsiD; gab protein; Protein csiD 2930817..2931803 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761783 YP_005233784.1 CDS STMMW_27571 NC_016854.1 2931829 2933097 D pfam_scan;Pfam:PF01266; E()=6.4E-65;score=219.5;query 3-389;description=DAO; putative GAB DTP gene cluster repressor 2931829..2933097 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761784 YP_005233785.1 CDS STMMW_27581 NC_016854.1 2933119 2934567 D pfam_scan;Pfam:PF00171; E()=2.7E-179;score=595.8;query 19-477;description=Aldedh; succinate-semialdehyde dehydrogenase 2933119..2934567 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761785 YP_005233786.1 CDS STMMW_27591 NC_016854.1 2934582 2935865 D pfam_scan;Pfam:PF00202; E()=5.1E-124;score=413.1;query 27-360;description=Aminotran_3; 4-aminobutyrate aminotransferase 2934582..2935865 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761786 YP_005233787.1 CDS STMMW_27601 NC_016854.1 2935995 2937395 D pfam_scan;Pfam:PF00324; E()=7.6E-138;score=459.3;query 18-453;description=AA_permease; tmhmm; query 1-467; GabA permease (4-amino butyrate transport carrier) 2935995..2937395 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761787 YP_005233788.1 CDS STMMW_27611 NC_016854.1 2937437 2938114 D pfam_scan;Pfam:PF00392; E()=5.4E-12;score=45.1;query14-70;description=GntR; pfam_scan;Pfam:PF07729; E()=1.1E-18;score=67.0;query80-210;description=FCD; putative transcriptional regulator 2937437..2938114 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761788 YP_005233789.1 CDS STMMW_27621 NC_016854.1 2938136 2938585 R pfam_scan;Pfam:PF04972; E()=4.4E-10;score=38.9;query29-89;description=BON; pfam_scan;Pfam:PF01476; E()=2.3E-11;score=43.0;query99-147;description=LysM; hypothetical protein complement(2938136..2938585) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761789 YP_005233790.1 CDS STMMW_27631 NC_016854.1 2938685 2938843 R pfam_scan;Pfam:PF01679; E()=5.1E-20;score=70.3;query2-50;description=UPF0057; tmhmm; query 1-53; hypothetical protein complement(2938685..2938843) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761790 YP_005233791.1 CDS STMMW_27641 NC_016854.1 2939026 2939325 D pfam_scan;Pfam:PF01022; E()=4.4E-14;score=51.7;query24-70;description=HTH_5; putative transcriptional regulator 2939026..2939325 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761791 YP_005233792.1 CDS STMMW_27651 NC_016854.1 2939335 2939862 D pfam_scan;Pfam:PF11127; E()=1.0E-6;score=28.6;query 115-172;description=DUF2892; pfam_scan;Pfam:PF00581; E()=7.3E-16;score=57.7;query7-99;description=Rhodanese; tmhmm; query 1-176; hypothetical protein 2939335..2939862 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761792 YP_005233793.1 CDS STMMW_27661 NC_016854.1 2940210 2940611 R pfam_scan;Pfam:PF00816; E()=9.4E-22;score=76.7;query26- 128;description=Histone_HNS; DNA-binding protein StpA complement(2940210..2940611) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761793 YP_005233794.1 CDS STMMW_27671 NC_016854.1 2941310 2941759 D pfam_scan;Pfam:PF06610; E()=2.8E-71;score=237.4;query 3-142;description=DUF1144; tmhmm; query 1-150; hypothetical protein 2941310..2941759 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761794 YP_005233795.1 CDS STMMW_27681 NC_016854.1 2941794 2942144 R pfam_scan;Pfam:PF09400; E()=1.3E-64;score=214.8;query 1-110;description=DUF2002; hypothetical protein complement(2941794..2942144) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761795 YP_005233796.1 CDS STMMW_27691 NC_016854.1 2942294 2942632 D pfam_scan;Pfam:PF05957; E()=7.6E-27;score=93.2;query19-111;description=DUF883; tmhmm; query 1-113; hypothetical protein 2942294..2942632 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761796 YP_005233797.1 CDS STMMW_27701 NC_016854.1 2942716 2944050 R pfam_scan;Pfam:PF00392; E()=5.2E-18;score=64.3;query4-66;description=GntR; pfam_scan;Pfam:PF00155; E()=5.5E-22;score=77.9;query127- 411;description=Aminotran_1_2; putative transcriptional regulator complement(2942716..2944050) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761797 YP_005233798.1 CDS STMMW_27711 NC_016854.1 2944139 2944570 D pfam_scan;Pfam:PF02627; E()=3.0E-21;score=74.6;query13-94;description=CMD; hypothetical protein 2944139..2944570 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761798 YP_005233799.1 CDS STMMW_27721 NC_016854.1 2944842 2945087 D pfam_scan;Pfam:PF00462; E()=2.5E-12;score=46.2;query3-58;description=Glutaredoxin; putative glutaredoxin 2944842..2945087 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761799 YP_005233800.1 CDS STMMW_27731 NC_016854.1 2945084 2945494 D pfam_scan;Pfam:PF07972; E()=4.7E-48;score=161.5;query 5-123;description=Flavodoxin_NdrI; NrdI protein 2945084..2945494 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761800 YP_005233801.1 CDS STMMW_27741 NC_016854.1 2945467 2947611 D pfam_scan;Pfam:PF02867; E()=5.9E-158;score=526.1;query 175-694;description=Ribonuc_red_lgC; pfam_scan;Pfam:PF00317; E()=2.3E-15;score=56.0;query99- 171;description=Ribonuc_red_lgN; pfam_scan;Pfam:PF08343; E()=9.1E-26;score=89.1;query16-97;description=RNR_N; ribonucleoside-diphosphate reductase 2 alpha chain 2945467..2947611 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761801 YP_005233802.1 CDS STMMW_27751 NC_016854.1 2947622 2948581 D pfam_scan;Pfam:PF00268; E()=2.2E-80;score=269.2;query 1-280;description=Ribonuc_red_sm; ribonucleoside-diphosphate reductase 2 beta chain 2947622..2948581 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761802 YP_005233803.1 CDS STMMW_27761 NC_016854.1 2948936 2950138 D pfam_scan;Pfam:PF00571; E()=1.1E-10;score=41.4;query299-392;description=CBS; pfam_scan;Pfam:PF00005; E()=1.5E-49;score=168.4;query 54-226;description=ABC_tran; glycine betaine/L-proline transport ATP-binding protein 2948936..2950138 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761803 YP_005233804.1 CDS STMMW_27771 NC_016854.1 2950131 2951195 D pfam_scan;Pfam:PF00528; E()=1.3E-27;score=96.1;query163- 329;description=BPD_transp_1; tmhmm; query 1-355; glycine betaine/L-proline transport system permease protein P 2950131..2951195 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761804 YP_005233805.1 CDS STMMW_27781 NC_016854.1 2951265 2952260 D pfam_scan;Pfam:PF04069; E()=4.9E-46;score=156.8;query 31-304;description=OpuAC; glycine betaine-binding periplasmic protein 2951265..2952260 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761805 YP_005233806.1 CDS STMMW_27791 NC_016854.1 2952425 2953609 D pfam_scan;Pfam:PF07690; E()=1.6E-30;score=106.3;query 17-273;description=MFS_1; tmhmm; query 1-395; putative transmembrane transport protein 2952425..2953609 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761806 YP_005233807.1 CDS STMMW_27801 NC_016854.1 2954106 2954636 D pfam_scan;Pfam:PF01047; E()=3.7E-16;score=58.1;query53-114;description=MarR; putative transcriptional regulator 2954106..2954636 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761807 YP_005233808.1 CDS STMMW_27811 NC_016854.1 2954763 2955935 D pfam_scan;Pfam:PF00529; E()=1.0E-74;score=251.4;query 60-343;description=HlyD; tmhmm; query 1-391; multidrug resistance protein A 2954763..2955935 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761808 YP_005233809.1 CDS STMMW_27821 NC_016854.1 2955952 2957490 D pfam_scan;Pfam:PF07690; E()=1.3E-56;score=192.0;query 19-413;description=MFS_1; multidrug resistance protein B 2955952..2957490 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761809 YP_005233810.1 CDS STMMW_27831 NC_016854.1 2957539 2958909 R Signal peptide; signalp; query 1-21;cleavage_site_probability=1.000; 1.000; putative glycoporin complement(2957539..2958909) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761810 YP_005233811.1 CDS STMMW_27841 NC_016854.1 2959255 2959770 R pfam_scan;Pfam:PF02664; E()=2.0E-73;score=244.5;query 3-159;description=LuxS; S-ribosylhomocysteinase; autoinducer-2 production protein LuxS; AI-2 synthesis protein complement(2959255..2959770) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761811 YP_005233812.1 CDS STMMW_27851 NC_016854.1 2959920 2961476 R pfam_scan;Pfam:PF04262; E()=1.2E-180;score=599.8;query 7-381;description=Glu_cys_ligase; Gamma-ECS; gamma-glutamylcysteine synthetase; glutamate--cysteine ligase; GCS complement(2959920..2961476) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761812 YP_005233813.1 CDS STMMW_27861 NC_016854.1 2961553 2961978 R pfam_scan;Pfam:PF09335; E()=2.1E-13;score=50.0;query29- 133;description=SNARE_assoc; tmhmm; query 1-142; hypothetical protein complement(2961553..2961978) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761813 YP_005233814.1 CDS STMMW_27871 NC_016854.1 2961975 2962541 R pfam_scan;Pfam:PF00702; E()=1.9E-33;score=115.9;query 7-184;description=Hydrolase; hypothetical protein complement(2961975..2962541) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761814 YP_005233815.1 CDS STMMW_27881 NC_016854.1 2963936 2964121 R pfam_scan;Pfam:PF02599; E()=1.1E-26;score=91.6;query1-54;description=CsrA; Carbon storage regulator complement(2963936..2964121) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761815 YP_005233816.1 CDS STMMW_27891 NC_016854.1 2964356 2966986 R pfam_scan;Pfam:PF01411; E()=2.5E-247;score=821.2;query 7-556;description=tRNA-synt_2c; pfam_scan;Pfam:PF07973; E()=5.4E-17;score=60.7;query653-696;description=tRNA_SAD; pfam_scan;Pfam:PF02272; E()=2.2E-17;score=62.2;query800-868;description=DHHA1; Alanine--tRNA ligase; alanyl-tRNA synthetase; AlaRS complement(2964356..2966986) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761816 YP_005233817.1 CDS STMMW_27901 NC_016854.1 2967222 2967722 R pfam_scan;Pfam:PF02631; E()=2.0E-33;score=114.4;query 50-162;description=RecX; Regulatory protein recX complement(2967222..2967722) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761817 YP_005233818.1 CDS STMMW_27911 NC_016854.1 2967839 2968900 R pfam_scan;Pfam:PF00154; E()=8.9E-174;score=576.7;query 9-327;description=RecA; recombinase A complement(2967839..2968900) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761818 YP_005233819.1 CDS STMMW_27921 NC_016854.1 2968985 2969482 R pfam_scan;Pfam:PF02464; E()=4.3E-62;score=207.8;query 8-160;description=CinA; hypothetical protein complement(2968985..2969482) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761819 YP_005233820.1 CDS STMMW_27931 NC_016854.1 2969960 2971039 R Signal peptide; signalp; query 1-26;cleavage_site_probability=0.784; 0.999; membrane-bound lytic transglycosylase B precursor complement(2969960..2971039) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761820 YP_005233821.1 CDS STMMW_27941 NC_016854.1 2971293 2971856 D pfam_scan;Pfam:PF03608; E()=8.5E-80;score=265.6;query 5-171;description=EII-GUT; tmhmm; query 1-188; PTS system, glucitol/sorbitol-specific IIBC component 2971293..2971856 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761821 YP_005233822.1 CDS STMMW_27951 NC_016854.1 2971853 2972824 D pfam_scan;Pfam:PF03612; E()=8.2E-74;score=246.9;query 3-175;description=EIIBC-GUT_N; pfam_scan;Pfam:PF07663; E()=1.8E-46;score=155.3;query 230-322;description=EIIBC-GUT_C; tmhmm; query 1-324; PTS system, glucitol/sorbitol-specific IIBC component 2971853..2972824 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761822 YP_005233823.1 CDS STMMW_27961 NC_016854.1 2972836 2973198 D pfam_scan;Pfam:PF03829; E()=8.5E-44;score=147.4;query 1-114;description=PTSIIA_gutA; PTS system glucitol/sorbitol-specific transporter subunit IIA 2972836..2973198 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761823 YP_005233824.1 CDS STMMW_27971 NC_016854.1 2973210 2973989 D pfam_scan;Pfam:PF00106; E()=3.0E-20;score=72.4;query4-170;description=adh_short; sorbitol-6-phosphate 2-dehydrogenase (glucitol-6-phosphate dehydrogenase) 2973210..2973989 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761824 YP_005233825.1 CDS STMMW_27981 NC_016854.1 2974065 2974424 D pfam_scan;Pfam:PF06923; E()=4.0E-38;score=129.2;query 3-110;description=GutM; tmhmm; query 1-120; glucitol operon activator protein 2974065..2974424 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761825 YP_005233826.1 CDS STMMW_27991 NC_016854.1 2974622 2975395 D pfam_scan;Pfam:PF00455; E()=6.5E-54;score=181.5;query 75-231;description=DeoR; pfam_scan;Pfam:PF08220; E()=5.6E-19;score=66.8;query6-61;description=HTH_DeoR; glucitol operon repressor 2974622..2975395 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761826 YP_005233827.1 CDS STMMW_28001 NC_016854.1 2975427 2976353 D pfam_scan;Pfam:PF01380; E()=9.4E-30;score=102.8;query 26-156;description=SIS; pfam_scan;Pfam:PF00571; E()=1.4E-19;score=70.1;query201-305;description=CBS; putative phosphosugar binding protein 2975427..2976353 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761827 YP_005233828.1 CDS STMMW_28011 NC_016854.1 2976350 2977870 R pfam_scan;Pfam:PF00158; E()=7.3E-70;score=233.7;query 187-353;description=Sigma54_activat; pfam_scan;Pfam:PF01590; E()=1.7E-15;score=57.1;query22-154;description=GAF; putative sigma-54-dependent transriptional regulator complement(2976350..2977870) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761828 YP_005233829.1 CDS STMMW_28021 NC_016854.1 2978056 2979495 D pfam_scan;Pfam:PF00258; E()=5.5E-16;score=58.7;query256- 389;description=Flavodoxin_1; pfam_scan;Pfam:PF00301; E()=7.1E-18;score=63.4;query425- 471;description=Rubredoxin; pfam_scan;Pfam:PF00753; E()=4.5E-29;score=100.9;query 31-178;description=Lactamase_B; anaerobic nitric oxide reductase flavorubredoxin 2978056..2979495 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761829 YP_005233830.1 CDS STMMW_28031 NC_016854.1 2979492 2980625 D pfam_scan;Pfam:PF07992; E()=6.4E-36;score=123.9;query 5-277;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=2.9E-19;score=69.0;query143-236;description=Pyr_redox; Nitric oxide reductase FlRd-NAD 2979492..2980625 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761830 YP_005233831.1 CDS STMMW_28041 NC_016854.1 2980722 2982962 R pfam_scan;Pfam:PF01300; E()=5.6E-44;score=149.3;query 209-373;description=Sua5_yciO_yrdC; pfam_scan;Pfam:PF07503; E()=2.5E-15;score=55.0;query108-142;description=zf-HYPF; pfam_scan;Pfam:PF00708; E()=3.6E-17;score=62.0;query7- 91;description=Acylphosphatase; hydrogenase maturation protein complement(2980722..2982962) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761831 YP_005233832.1 CDS STMMW_28051 NC_016854.1 2983108 2983653 R pfam_scan;Pfam:PF00037; E()=5.4E-8;score=31.5;query 83-104;description=Fer4; electron transport protein complement(2983108..2983653) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761832 YP_005233833.1 CDS STMMW_28061 NC_016854.1 2983854 2984663 R tmhmm; query 1-270; hypothetical protein complement(2983854..2984663) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761833 YP_005233834.1 CDS STMMW_28071 NC_016854.1 2984690 2985160 R pfam_scan;Pfam:PF01750; E()=7.6E-26;score=89.8;query24-138;description=HycI; hydrogenase 3 maturation protease complement(2984690..2985160) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761834 YP_005233835.1 CDS STMMW_28081 NC_016854.1 2985153 2985563 R pfam_scan;Pfam:PF07450; E()=2.7E-59;score=198.3;query 3-133;description=HycH; formate hydrogenlyase maturation protein complement(2985153..2985563) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761835 YP_005233836.1 CDS STMMW_28091 NC_016854.1 2985560 2986327 R pfam_scan;Pfam:PF01058; E()=1.3E-26;score=92.3;query48- 157;description=Oxidored_q6; formate hydrogenlyase subunit 7 complement(2985560..2986327) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761836 YP_005233837.1 CDS STMMW_28101 NC_016854.1 2986327 2986869 R pfam_scan;Pfam:PF00037; E()=1.5E-7;score=30.1;query 34-56;description=Fer4; formate hydrogenlyase subunit 6 complement(2986327..2986869) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761837 YP_005233838.1 CDS STMMW_28111 NC_016854.1 2986879 2988588 R pfam_scan;Pfam:PF00346; E()=7.8E-20;score=70.7;query299- 466;description=Complex1_49kDa; pfam_scan;Pfam:PF00329; E()=1.6E-25;score=88.5;query44- 150;description=Complex1_30kDa; pfam_scan;Pfam:PF00374; E()=1.7E-12;score=46.4;query218- 286;description=NiFeSe_Hases; formate hydrogenlyase subunit 5 complement(2986879..2988588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761838 YP_005233839.1 CDS STMMW_28121 NC_016854.1 2988606 2989529 R pfam_scan;Pfam:PF00146; E()=8.5E-21;score=73.6;query11-294;description=NADHdh; tmhmm; query 1-308; formate hydrogenlyase subunit 4 complement(2988606..2989529) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761839 YP_005233840.1 CDS STMMW_28131 NC_016854.1 2989532 2991358 R pfam_scan;Pfam:PF00361; E()=8.1E-37;score=126.4;query 124-395;description=Oxidored_q1; tmhmm; query 1-609; formate hydrogenlyase subunit 3 complement(2989532..2991358) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761840 YP_005233841.1 CDS STMMW_28141 NC_016854.1 2991358 2991966 R pfam_scan;Pfam:PF00037; E()=6.7E-7;score=28.0;query 76-98;description=Fer4; formate hydrogenlyase subunit 2 complement(2991358..2991966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761841 YP_005233842.1 CDS STMMW_28151 NC_016854.1 2992112 2992573 R pfam_scan;Pfam:PF11046; E()=2.3E-86;score=286.7;query 1-148;description=HycA_repressor; formate hydrogenlyase regulatory protein complement(2992112..2992573) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761842 YP_005233843.1 CDS STMMW_28161 NC_016854.1 2992783 2993139 D pfam_scan;Pfam:PF01155; E()=3.5E-35;score=119.7;query 1-113;description=HypA; hydrogenase nickel incorporation protein hypA; HypA protein 2992783..2993139 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761843 YP_005233844.1 CDS STMMW_28171 NC_016854.1 2993208 2994080 D pfam_scan;Pfam:PF02492; E()=8.5E-43;score=145.9;query 106-267;description=cobW; hydrogenase isoenzymes formation protein HypB 2993208..2994080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761844 YP_005233845.1 CDS STMMW_28181 NC_016854.1 2994071 2994343 D pfam_scan;Pfam:PF01455; E()=1.6E-23;score=82.3;query1-72;description=HupF_HypC; hydrogenase isoenzymes formation protein HypC 2994071..2994343 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761845 YP_005233846.1 CDS STMMW_28191 NC_016854.1 2994343 2995464 D pfam_scan;Pfam:PF01924; E()=1.0E-155;score=517.5;query 13-368;description=HypD; hydrogenase expression/formation protein HypD 2994343..2995464 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761846 YP_005233847.1 CDS STMMW_28201 NC_016854.1 2995503 2996471 D pfam_scan;Pfam:PF00586; E()=1.5E-18;score=66.2;query22-118;description=AIRS; pfam_scan;Pfam:PF02769; E()=1.8E-26;score=92.2;query152-300;description=AIRS_C; hydrogenase isoenzymes formation protein HypE 2995503..2996471 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761847 YP_005233848.1 CDS STMMW_28211 NC_016854.1 2996690 2998768 D pfam_scan;Pfam:PF00158; E()=8.4E-74;score=246.5;query 381-548;description=Sigma54_activat; pfam_scan;Pfam:PF01590; E()=9.3E-17;score=61.2;query202-344;description=GAF; pfam_scan;Pfam:PF02954; E()=1.6E-5;score=24.1;query 645-684;description=HTH_8; transcriptional activator of the formate hydrogenlyase system 2996690..2998768 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761848 YP_005233849.1 CDS STMMW_28221 NC_016854.1 2998830 2999174 R pfam_scan;Pfam:PF11756; E()=2.0E-45;score=152.4;query 4-111;description=YgbA_NO; hypothetical protein complement(2998830..2999174) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761849 YP_005233850.1 CDS STMMW_28231 NC_016854.1 2999356 3000273 D pfam_scan;Pfam:PF01297; E()=1.6E-77;score=260.2;query 11-297;description=SBP_bac_9; tmhmm; query 1-306; Iron transport protein, periplasmic-binding protein 2999356..3000273 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761850 YP_005233851.1 CDS STMMW_28241 NC_016854.1 3000270 3001091 D pfam_scan;Pfam:PF00005; E()=2.8E-40;score=138.1;query 32-202;description=ABC_tran; Iron transport protein, ATP-binding component 3000270..3001091 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761851 YP_005233852.1 CDS STMMW_28251 NC_016854.1 3001088 3001948 D pfam_scan;Pfam:PF00950; E()=9.0E-81;score=270.6;query 10-264;description=ABC-3; Iron transport protein, inner membrane component 3001088..3001948 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761852 YP_005233853.1 CDS STMMW_28261 NC_016854.1 3001939 3002787 D pfam_scan;Pfam:PF00950; E()=1.6E-80;score=269.8;query 11-266;description=ABC-3; tmhmm; query 1-283; Iron transport protein, inner membrane component 3001939..3002787 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761853 YP_005233854.1 CDS STMMW_28271 NC_016854.1 3002886 3003794 R not in original SPI-1; A secreted Salmonella protein with homology to an avirulence determinant of plant pathogenic bacteria; pfam_scan;Pfam:PF03421; E()=1.8E-57;score=193.2;query 40-214;description=YopJ; Avirulence determinant of plant pathogenic bacteria complement(3002886..3003794) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761854 YP_005233855.1 CDS STMMW_28281 NC_016854.1 3003955 3004710 R AraC family transcriptional regulator complement(3003955..3004710) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761855 YP_005233856.1 CDS STMMW_28291 NC_016854.1 3005095 3005982 R pfam_scan;Pfam:PF00165; E()=3.3E-7;score=29.8;query 258-290;description=HTH_AraC; AraC family transcriptional regulator complement(3005095..3005982) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761856 YP_005233857.1 CDS STMMW_28301 NC_016854.1 3006327 3006779 R hypothetical protein complement(3006327..3006779) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761857 YP_005233858.1 CDS STMMW_28311 NC_016854.1 3006776 3007456 R oxygen-regulated invasion protein; cell invasion protein complement(3006776..3007456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761858 YP_005233859.1 CDS STMMW_28321 NC_016854.1 3007413 3008012 R pfam_scan;Pfam:PF09482; E()=6.8E-72;score=240.5;query 17-195;description=OrgA_MxiK; oxygen-regulated invasion protein; cell invasion protein complement(3007413..3008012) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761859 YP_005233860.1 CDS STMMW_28331 NC_016854.1 3007984 3008742 R pfam_scan;Pfam:PF01514; E()=7.1E-58;score=194.9;query 5-192;description=YscJ_FliF; tmhmm; query 1-253; pathogenicity 1 island effector protein complement(3007984..3008742) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761860 YP_005233861.1 CDS STMMW_28341 NC_016854.1 3008739 3009044 R pfam_scan;Pfam:PF09392; E()=4.9E-7;score=29.5;query 44-100;description=MxiH; pathogenicity 1 island effector protein complement(3008739..3009044) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761861 YP_005233862.1 CDS STMMW_28351 NC_016854.1 3009063 3009305 R pfam_scan;Pfam:PF09392; E()=1.8E-19;score=69.2;query9-79;description=MxiH; pathogenicity 1 island effector protein complement(3009063..3009305) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761862 YP_005233863.1 CDS STMMW_28361 NC_016854.1 3009330 3010508 R pfam_scan;Pfam:PF09480; E()=9.0E-156;score=517.8;query 15-388;description=PrgH; tmhmm; query 1-393; pathogenicity 1 island effector protein complement(3009330..3010508) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761863 YP_005233864.1 CDS STMMW_28371 NC_016854.1 3010824 3011753 D pfam_scan;Pfam:PF00165; E()=2.4E-5;score=23.9;query 215-253;description=HTH_AraC; AraC family transcriptional regulator 3010824..3011753 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761864 YP_005233865.1 CDS STMMW_28381 NC_016854.1 3012844 3014505 D pfam_scan;Pfam:PF00486; E()=4.3E-18;score=64.1;query32- 105;description=Trans_reg_C; invasion protein regulator 3012844..3014505 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761865 YP_005233866.1 CDS STMMW_28391 NC_016854.1 3014523 3015005 D pfam_scan;Pfam:PF01464; E()=6.9E-37;score=125.2;query 20-138;description=SLT; cell invasion protein 3014523..3015005 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761866 YP_005233867.1 CDS STMMW_28401 NC_016854.1 3015059 3016690 R pfam_scan;Pfam:PF00102; E()=1.4E-23;score=82.8;query314- 532;description=Y_phosphatase; pfam_scan;Pfam:PF09119; E()=1.6E-39;score=133.0;query 41-121;description=SicP-binding; pfam_scan;Pfam:PF03545; E()=1.1E-29;score=101.4;query 192-261;description=YopE; tyrosine phosphatase (associated with virulence) complement(3015059..3016690) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761867 YP_005233868.1 CDS STMMW_28411 NC_016854.1 3016677 3017069 R pfam_scan;Pfam:PF05932; E()=6.2E-11;score=42.0;query5-120;description=CesT; chaperone (associated with virulence) complement(3016677..3017069) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761868 YP_005233869.1 CDS STMMW_28421 NC_016854.1 3017096 3017356 R hypothetical protein complement(3017096..3017356) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761869 YP_005233870.1 CDS STMMW_28431 NC_016854.1 3017400 3017648 R pfam_scan;Pfam:PF00550; E()=3.1E-6;score=26.8;query 8-73;description=PP-binding; acyl carrier protein complement(3017400..3017648) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761870 YP_005233871.1 CDS STMMW_28441 NC_016854.1 3017667 3019724 R pfam_scan;Pfam:PF09052; E()=0.0;score=1092.9;query 1-682;description=SipA; pathogenicity island 1 effector protein complement(3017667..3019724) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761871 YP_005233872.1 CDS STMMW_28451 NC_016854.1 3019743 3020774 R pfam_scan;Pfam:PF06511; E()=6.4E-165;score=547.9;query 5-341;description=IpaD; pathogenicity island 1 effector protein complement(3019743..3020774) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761872 YP_005233873.1 CDS STMMW_28461 NC_016854.1 3020845 3022074 R pfam_scan;Pfam:PF09599; E()=9.3E-139;score=462.0;query 46-397;description=IpaC_SipC; pathogenicity island 1 effector protein complement(3020845..3022074) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761873 YP_005233874.1 CDS STMMW_28471 NC_016854.1 3022102 3023883 R pfam_scan;Pfam:PF04888; E()=1.0E-72;score=245.0;query 259-590;description=SseC; tmhmm; query 1-594; pathogenicity island 1 effector protein complement(3022102..3023883) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761874 YP_005233875.1 CDS STMMW_28481 NC_016854.1 3023886 3024383 R pfam_scan;Pfam:PF07720; E()=4.6E-13;score=48.2;query37-70;description=TPR_3; hypothetical protein complement(3023886..3024383) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761875 YP_005233876.1 CDS STMMW_28491 NC_016854.1 3024521 3025591 R pfam_scan;Pfam:PF01312; E()=4.6E-117;score=390.3;query 1-336;description=Bac_export_2; tmhmm; query 1-357; secretory protein (associated with virulence) complement(3024521..3025591) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761876 YP_005233877.1 CDS STMMW_28501 NC_016854.1 3025578 3026369 R pfam_scan;Pfam:PF01311; E()=8.2E-80;score=267.2;query 8-247;description=Bac_export_1; tmhmm; query 1-264; secretory protein (associated with virulence) complement(3025578..3026369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761877 YP_005233878.1 CDS STMMW_28511 NC_016854.1 3026373 3026633 R pfam_scan;Pfam:PF01313; E()=1.8E-23;score=81.6;query4-76;description=Bac_export_3; tmhmm; query 1-87; secretory protein (associated with virulence) complement(3026373..3026633) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761878 YP_005233879.1 CDS STMMW_28521 NC_016854.1 3026659 3027333 R pfam_scan;Pfam:PF00813; E()=1.2E-63;score=213.9;query 11-216;description=FliP; tmhmm; query 1-225; secretory protein (associated with virulence) complement(3026659..3027333) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761879 YP_005233880.1 CDS STMMW_28531 NC_016854.1 3027323 3028234 R pfam_scan;Pfam:PF01052; E()=2.8E-15;score=55.4;query227-298;description=SpoA; surface presentation of antigens protein (associated with type III secretion and virulence) complement(3027323..3028234) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761880 YP_005233881.1 CDS STMMW_28541 NC_016854.1 3028234 3029244 R pfam_scan;Pfam:PF02510; E()=8.0E-214;score=708.4;query 1-336;description=SPAN; surface presentation of antigens protein (associated with type III secretion and virulence) complement(3028234..3029244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761881 YP_005233882.1 CDS STMMW_28551 NC_016854.1 3029244 3029687 R pfam_scan;Pfam:PF02090; E()=3.7E-92;score=305.8;query 1-147;description=SPAM; secretory protein (associated with virulence) complement(3029244..3029687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761882 YP_005233883.1 CDS STMMW_28561 NC_016854.1 3029665 3030960 R pfam_scan;Pfam:PF00006; E()=3.9E-86;score=287.3;query 138-348;description=ATP-synt_ab; secretory apparatus ATP synthase (associated with virulence) complement(3029665..3030960) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761883 YP_005233884.1 CDS STMMW_28571 NC_016854.1 3030957 3031364 R pfam_scan;Pfam:PF03519; E()=3.5E-33;score=112.3;query 18-96;description=Invas_SpaK; secretory protein (associated with virulence) complement(3030957..3031364) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761884 YP_005233885.1 CDS STMMW_28581 NC_016854.1 3031388 3033445 R pfam_scan;Pfam:PF00771; E()=1.9E-222;score=740.0;query 23-678;description=FHIPEP; tmhmm; query 1-686; secretory protein (associated with virulence) complement(3031388..3033445) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761885 YP_005233886.1 CDS STMMW_28591 NC_016854.1 3033470 3034588 R pfam_scan;Pfam:PF07201; E()=2.6E-44;score=150.5;query 51-211;description=HrpJ; cell invasion protein complement(3033470..3034588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761886 YP_005233887.1 CDS STMMW_28601 NC_016854.1 3034585 3036273 R pfam_scan;Pfam:PF03958; E()=2.5E-5;score=24.0;query 110-169;description=Secretin_N; pfam_scan;Pfam:PF00263; E()=1.9E-36;score=125.6;query 317-516;description=Secretin; secretory protein (associated with virulence) complement(3034585..3036273) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761887 YP_005233888.1 CDS STMMW_28611 NC_016854.1 3036270 3036920 R AraC family regulatory protein complement(3036270..3036920) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761888 YP_005233889.1 CDS STMMW_28621 NC_016854.1 3037377 3037820 D pfam_scan;Pfam:PF04741; E()=1.0E-95;score=316.9;query 1-147;description=InvH; cell adherance/invasion protein 3037377..3037820 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761889 YP_005233890.1 CDS STMMW_28631 NC_016854.1 3038251 3038700 D pathogenicity island 1 protein 3038251..3038700 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761890 YP_005233891.1 CDS STMMW_28641 NC_016854.1 3038685 3039032 D pfam_scan;Pfam:PF07377; E()=9.1E-34;score=115.5;query 6-115;description=DUF1493; pathogenicity island 1 protein 3038685..3039032 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761891 YP_005233892.1 CDS STMMW_28651 NC_016854.1 3039305 3039631 R pathogenicity island 1 protein complement(3039305..3039631) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761892 YP_005233893.1 CDS STMMW_28661 NC_016854.1 3039872 3039979 D pathogenicity island 1 protein 3039872..3039979 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761893 YP_005233894.1 CDS STMMW_28671 NC_016854.1 3040320 3040610 D pfam_scan;Pfam:PF08681; E()=3.0E-25;score=87.7;query14-91;description=DUF1778; pathogenicity island 1 protein 3040320..3040610 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761894 YP_005233895.1 CDS STMMW_28681 NC_016854.1 3040607 3041134 D pfam_scan;Pfam:PF00583; E()=1.6E-6;score=27.7;query 88-147;description=Acetyltransf_1; pathogenicity island 1 protein 3040607..3041134 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761895 YP_005233896.1 CDS STMMW_28701 NC_016854.1 3041759 3042415 D pfam_scan;Pfam:PF00149; E()=1.7E-20;score=72.3;query16- 167;description=Metallophos; serine/threonine protein phosphatase 3041759..3042415 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761897 YP_005233897.1 CDS STMMW_28711 NC_016854.1 3042587 3043108 R hypothetical protein complement(3042587..3043108) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761898 YP_005233898.1 CDS STMMW_28721 NC_016854.1 3043309 3045834 D pfam_scan;Pfam:PF00488; E()=1.3E-107;score=358.1;query 555-786;description=MutS_V; pfam_scan;Pfam:PF05190; E()=1.7E-30;score=104.5;query 416-505;description=MutS_IV; pfam_scan;Pfam:PF05192; E()=3.8E-67;score=226.0;query 253-551;description=MutS_III; pfam_scan;Pfam:PF05188; E()=7.1E-39;score=132.6;query 119-244;description=MutS_II; pfam_scan;Pfam:PF01624; E()=7.0E-47;score=157.4;query 1-110;description=MutS_I; DNA mismatch repair protein 3043309..3045834 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761899 YP_005233899.1 CDS STMMW_28731 NC_016854.1 3045890 3046270 R hypothetical protein complement(3045890..3046270) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761900 YP_005233900.1 CDS STMMW_28741 NC_016854.1 3046267 3047475 R pfam_scan;Pfam:PF07690; E()=1.3E-44;score=152.6;query 12-347;description=MFS_1; tmhmm; query 1-403; membrane transport protein complement(3046267..3047475) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761901 YP_005233901.1 CDS STMMW_28751 NC_016854.1 3047563 3048495 D pfam_scan;Pfam:PF00126; E()=7.6E-17;score=60.6;query11-69;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.3E-42;score=144.8;query 95-301;description=LysR_substrate; LysR family transcriptional regulator 3047563..3048495 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761902 YP_005233902.1 CDS STMMW_28761 NC_016854.1 3048537 3050033 R pfam_scan;Pfam:PF02447; E()=1.7E-138;score=461.7;query 7-458;description=GntP_permease; tmhmm; query 1-499; permease complement(3048537..3050033) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761903 YP_005233903.1 CDS STMMW_28771 NC_016854.1 3050030 3050980 R pfam_scan;Pfam:PF01370; E()=1.4E-28;score=99.5;query3-212;description=Epimerase; hypothetical protein complement(3050030..3050980) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761904 YP_005233904.1 CDS STMMW_28781 NC_016854.1 3051020 3051796 R pfam_scan;Pfam:PF01261; E()=8.0E-43;score=145.7;query 21-219;description=AP_endonuc_2; putative hydroxypyruvate isomerase complement(3051020..3051796) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761905 YP_005233905.1 CDS STMMW_28791 NC_016854.1 3051801 3052439 R pfam_scan;Pfam:PF00596; E()=2.5E-49;score=166.9;query 13-190;description=Aldolase_II; sugar aldolase complement(3051801..3052439) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761906 YP_005233906.1 CDS STMMW_28801 NC_016854.1 3052436 3053698 R pfam_scan;Pfam:PF07005; E()=4.3E-66;score=222.1;query 161-380;description=DUF1537; hypothetical protein complement(3052436..3053698) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761907 YP_005233907.1 CDS STMMW_28811 NC_016854.1 3053692 3054615 R pfam_scan;Pfam:PF03446; E()=6.5E-42;score=142.6;query 8-166;description=NAD_binding_2; hypothetical protein complement(3053692..3054615) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761908 YP_005233908.1 CDS STMMW_28821 NC_016854.1 3054812 3055576 D pfam_scan;Pfam:PF00455; E()=7.1E-35;score=119.6;query 78-231;description=DeoR; pfam_scan;Pfam:PF08220; E()=7.6E-17;score=60.0;query6-60;description=HTH_DeoR; DeoR family transcriptional regulator 3054812..3055576 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761909 YP_005233909.1 CDS STMMW_28831 NC_016854.1 3055595 3055999 R pfam_scan;Pfam:PF01047; E()=5.6E-14;score=51.1;query29-88;description=MarR; putative regulatory protein complement(3055595..3055999) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761910 YP_005233910.1 CDS STMMW_28841 NC_016854.1 3056170 3056763 D pfam_scan;Pfam:PF02441; E()=1.9E-25;score=88.8;query1- 122;description=Flavoprotein; decarboxylase 3056170..3056763 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761911 YP_005233911.1 CDS STMMW_28851 NC_016854.1 3056763 3058190 D pfam_scan;Pfam:PF01977; E()=1.5E-116;score=389.1;query 10-418;description=UbiD; hypothetical protein 3056763..3058190 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761912 YP_005233912.1 CDS STMMW_28861 NC_016854.1 3058201 3058437 D hypothetical protein 3058201..3058437 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761913 YP_005233913.1 CDS STMMW_28871 NC_016854.1 3058482 3059474 R pfam_scan;Pfam:PF04545; E()=2.7E-15;score=55.5;query262- 315;description=Sigma70_r4; pfam_scan;Pfam:PF00140; E()=3.4E-11;score=41.5;query56- 89;description=Sigma70_r1_2; pfam_scan;Pfam:PF04539; E()=1.2E-21;score=76.2;query168- 249;description=Sigma70_r3; pfam_scan;Pfam:PF04542; E()=2.9E-22;score=77.8;query94-164;description=Sigma70_r2; RNA polymerase sigma subunit RpoS (sigma-38) complement(3058482..3059474) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761914 YP_005233914.1 CDS STMMW_28881 NC_016854.1 3059537 3060670 R pfam_scan;Pfam:PF01551; E()=3.7E-33;score=112.9;query 277-370;description=Peptidase_M23; pfam_scan;Pfam:PF01476; E()=1.9E-10;score=40.1;query121-163;description=LysM; lipoprotein NlpD complement(3059537..3060670) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761915 YP_005233915.1 CDS STMMW_28891 NC_016854.1 3060846 3061472 R pfam_scan;Pfam:PF01135; E()=5.3E-82;score=274.1;query 6-206;description=PCMT; L-isoaspartyl protein carboxyl methyltransferase type II; PIMT; Protein-beta-aspartate methyltransferase; protein L-isoaspartyl methyltransferase; protein-L-isoaspartate O-methyltransferase; L-isoaspartyl protein carboxyl methyltransferase complement(3060846..3061472) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761916 YP_005233916.1 CDS STMMW_28901 NC_016854.1 3061466 3062227 R pfam_scan;Pfam:PF01975; E()=1.1E-66;score=223.6;query 1-182;description=SurE; stationary-phase survival protein; Acid phosphatase surE complement(3061466..3062227) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761917 YP_005233917.1 CDS STMMW_28911 NC_016854.1 3062208 3063257 R pfam_scan;Pfam:PF01142; E()=2.1E-119;score=397.9;query 1-337;description=TruD; Uracil hydrolyase; Uracil hydrolyase. tRNA pseudouridine synthase D EC 4.2.1.70; protein; Pseudouridylate synthase complement(3062208..3063257) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761918 YP_005233918.1 CDS STMMW_28921 NC_016854.1 3063254 3063733 R pfam_scan;Pfam:PF02542; E()=7.7E-72;score=239.5;query 1-156;description=YgbB; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase complement(3063254..3063733) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761919 YP_005233919.1 CDS STMMW_28931 NC_016854.1 3063733 3064443 R pfam_scan;Pfam:PF01128; E()=7.7E-91;score=303.4;query 8-229;description=IspD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(3063733..3064443) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761920 YP_005233920.1 CDS STMMW_28941 NC_016854.1 3064462 3064773 R pfam_scan;Pfam:PF04977; E()=6.8E-30;score=102.2;query 11-89;description=DivIC; tmhmm; query 1-104; protein; Cell division protein ftsB-like protein complement(3064462..3064773) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761921 YP_005233921.1 CDS STMMW_28961 NC_016854.1 3065337 3065942 R pfam_scan;Pfam:PF01583; E()=8.8E-73;score=243.1;query 27-179;description=APS_kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'phosphosulfate kinase; adenosine 5-phosphosulfate kinase; adenylylsulfate kinase; APS kinase complement(3065337..3065942) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761923 YP_005233922.1 CDS STMMW_28971 NC_016854.1 3065929 3067368 R pfam_scan;Pfam:PF03144; E()=2.6E-6;score=27.2;query 264-324;description=GTP_EFTU_D2; pfam_scan;Pfam:PF00009; E()=6.1E-47;score=159.3;query 27-233;description=GTP_EFTU; ATP-sulfurylase large subunit; SAT; Sulfate adenylate transferase; sulfate adenylyltransferase subunit 1; ATP sulfurylase (ATP:sulfate adenyltransferase) subunit complement(3065929..3067368) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761924 YP_005233923.1 CDS STMMW_28981 NC_016854.1 3067378 3068286 R pfam_scan;Pfam:PF01507; E()=1.2E-61;score=207.0;query 29-256;description=PAPS_reduct; ATP-sulfurylase small subunit; SAT; Sulfate adenylate transferase; sulfate adenylyltransferase subunit 2; ATP sulfurylase (ATP:sulfate adenyltransferase) complement(3067378..3068286) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761925 YP_005233924.1 CDS STMMW_28991 NC_016854.1 3068537 3069583 D pfam_scan;Pfam:PF04389; E()=2.4E-27;score=95.8;query111- 317;description=Peptidase_M28; alkaline phosphatase isozyme conversion protein 3068537..3069583 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761926 YP_005233925.1 CDS STMMW_29001 NC_016854.1 3071109 3071405 R pfam_scan;Pfam:PF09707; E()=7.5E-39;score=131.1;query 4-89;description=Cas_Cas2CT1978; hypothetical protein complement(3071109..3071405) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761927 YP_005233926.1 CDS STMMW_29011 NC_016854.1 3071402 3072322 R pfam_scan;Pfam:PF01867; E()=2.8E-5;score=22.8;query 25-121;description=DUF48; hypothetical protein complement(3071402..3072322) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761928 YP_005233927.1 CDS STMMW_29021 NC_016854.1 3072319 3072969 R pfam_scan;Pfam:PF08798; E()=1.9E-63;score=213.4;query 1-212;description=CRISPR_assoc; hypothetical protein complement(3072319..3072969) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761929 YP_005233928.1 CDS STMMW_29031 NC_016854.1 3072951 3073697 R hypothetical protein complement(3072951..3073697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761930 YP_005233929.1 CDS STMMW_29041 NC_016854.1 3073708 3074766 R pfam_scan;Pfam:PF09344; E()=1.3E-126;score=422.3;query 5-343;description=Cas_CT1975; hypothetical protein complement(3073708..3074766) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761931 YP_005233930.1 CDS STMMW_29051 NC_016854.1 3074780 3075340 R pfam_scan;Pfam:PF09485; E()=5.3E-33;score=113.9;query 24-174;description=CRISPR_Cse2; hypothetical protein complement(3074780..3075340) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761932 YP_005233931.1 CDS STMMW_29061 NC_016854.1 3075337 3076893 R pfam_scan;Pfam:PF09481; E()=8.1E-142;score=472.8;query 6-474;description=CRISPR_Cse1; hypothetical protein complement(3075337..3076893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761933 YP_005233932.1 CDS STMMW_29071 NC_016854.1 3076905 3079568 R hypothetical protein complement(3076905..3079568) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761934 YP_005233933.1 CDS STMMW_29081 NC_016854.1 3080013 3080966 D pfam_scan;Pfam:PF11047; E()=2.9E-191;score=633.7;query 1-316;description=SopD; hypothetical protein 3080013..3080966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761935 YP_005233934.1 CDS STMMW_29091 NC_016854.1 3081054 3081788 R pfam_scan;Pfam:PF01507; E()=7.8E-60;score=201.2;query 48-219;description=PAPS_reduct; 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase; phosphoadenosine phosphosulfate reductase; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase complement(3081054..3081788) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761936 YP_005233935.1 CDS STMMW_29101 NC_016854.1 3081864 3083576 R pfam_scan;Pfam:PF03460; E()=2.3E-11;score=42.5;query81- 139;description=NIR_SIR_ferr; pfam_scan;Pfam:PF01077; E()=4.8E-44;score=149.3;query 173-330;description=NIR_SIR; sulfite reductase (NADPH) hemoprotein alpha subunit complement(3081864..3083576) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761937 YP_005233936.1 CDS STMMW_29111 NC_016854.1 3083576 3085195 R pfam_scan;Pfam:PF00667; E()=7.4E-51;score=172.2;query 170-364;description=FAD_binding_1; pfam_scan;Pfam:PF00258; E()=3.9E-33;score=114.3;query 7-136;description=Flavodoxin_1; pfam_scan;Pfam:PF00175; E()=4.4E-20;score=71.6;query397- 504;description=NAD_binding_1; sulfite reductase (NADPH) flavoprotein subunit beta complement(3083576..3085195) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761938 YP_005233937.1 CDS STMMW_29121 NC_016854.1 3085799 3086161 D pfam_scan;Pfam:PF01242; E()=2.9E-38;score=129.9;query 5-120;description=PTPS; putative 6-pyruvoyl tetrahydrobiopterin synthase 3085799..3086161 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761939 YP_005233938.1 CDS STMMW_29131 NC_016854.1 3086249 3087046 R pfam_scan;Pfam:PF00753; E()=5.4E-16;score=58.2;query23-85;description=Lactamase_B; hypothetical protein complement(3086249..3087046) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761940 YP_005233939.1 CDS STMMW_29141 NC_016854.1 3088568 3089239 R pfam_scan;Pfam:PF04055; E()=9.4E-8;score=31.7;query 27-123;description=Radical_SAM; hypothetical protein complement(3088568..3089239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761941 YP_005233940.1 CDS STMMW_29151 NC_016854.1 3089375 3090673 R pfam_scan;Pfam:PF00113; E()=3.0E-139;score=462.7;query 144-429;description=Enolase_C; pfam_scan;Pfam:PF03952; E()=1.1E-59;score=199.7;query 3-134;description=Enolase_N; 2-phosphoglycerate dehydratase; enolase; 2-phospho-D-glycerate hydro-lyase complement(3089375..3090673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761942 YP_005233941.1 CDS STMMW_29161 NC_016854.1 3090756 3092393 R pfam_scan;Pfam:PF00117; E()=9.5E-39;score=132.4;query 301-534;description=GATase; pfam_scan;Pfam:PF06418; E()=1.8E-132;score=440.1;query 3-276;description=CTP_synth_N; tmhmm; query 1-546; CTP synthetase; UTP--ammonia ligase; CTP synthase complement(3090756..3092393) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761943 YP_005233942.1 CDS STMMW_29171 NC_016854.1 3092621 3093421 R pfam_scan;Pfam:PF03819; E()=1.0E-29;score=101.5;query 30-103;description=MazG; hypothetical protein complement(3092621..3093421) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761944 YP_005233943.1 CDS STMMW_29180 NC_016854.1 3094189 3094479 R pfam_scan;Pfam:PF05016; E()=4.3E-12;score=46.4;query2- 88;description=Plasmid_stabil; plasmid stabilization system protein, RelE/ParE family complement(3094189..3094479) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761945 YP_005233944.1 CDS STMMW_29181 NC_016854.1 3094451 3094807 R pfam_scan;Pfam:PF03693; E()=1.3E-19;score=69.4;query24-101;description=RHH_2; putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain complement(3094451..3094807) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761946 YP_005233945.1 CDS STMMW_29191 NC_016854.1 3094891 3097125 R pfam_scan;Pfam:PF01842; E()=2.7E-9;score=36.7;query 668-734;description=ACT; pfam_scan;Pfam:PF02824; E()=1.5E-23;score=82.0;query406-465;description=TGS; pfam_scan;Pfam:PF04607; E()=6.9E-45;score=151.3;query 251-360;description=RelA_SpoT; GTP pyrophosphokinase complement(3094891..3097125) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761947 YP_005233946.1 CDS STMMW_29201 NC_016854.1 3097177 3098472 R pfam_scan;Pfam:PF01938; E()=1.1E-12;score=47.0;query11-66;description=TRAM; pfam_scan;Pfam:PF05958; E()=4.8E-27;score=94.4;query251-430;description=tRNA_U5- meth_tr; Uracil-5--methyltransferase complement(3097177..3098472) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761948 YP_005233947.1 CDS STMMW_29211 NC_016854.1 3098530 3101286 D pfam_scan;Pfam:PF00672; E()=1.5E-13;score=49.9;query182-248;description=HAMP; pfam_scan;Pfam:PF02518; E()=1.0E-32;score=111.8;query 404-518;description=HATPase_c; pfam_scan;Pfam:PF09984; E()=7.6E-59;score=197.2;query 31-178;description=DUF2222; pfam_scan;Pfam:PF00072; E()=2.4E-31;score=107.7;query 670-780;description=Response_reg; pfam_scan;Pfam:PF01627; E()=1.2E-14;score=53.4;query828-911;description=Hpt; pfam_scan;Pfam:PF00512; E()=5.7E-23;score=80.1;query293-357;description=HisKA; tmhmm; query 1-919; sensor protein 3098530..3101286 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761949 YP_005233948.1 CDS STMMW_29221 NC_016854.1 3101330 3102472 R pfam_scan;Pfam:PF02595; E()=8.9E-172;score=570.5;query 1-377;description=Gly_kinase; hypothetical protein complement(3101330..3102472) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761950 YP_005233949.1 CDS STMMW_29231 NC_016854.1 3102550 3103890 R pfam_scan;Pfam:PF01188; E()=4.2E-14;score=52.2;query185-285;description=MR_MLE; glucarate dehydratase 1 complement(3102550..3103890) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761951 YP_005233950.1 CDS STMMW_29241 NC_016854.1 3103911 3105251 R pfam_scan;Pfam:PF01188; E()=1.3E-16;score=60.2;query185-284;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=5.7E-8;score=32.5;query 39-136;description=MR_MLE_N; glucarate dehydratase 2 complement(3103911..3105251) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761952 YP_005233951.1 CDS STMMW_29251 NC_016854.1 3105248 3106606 R pfam_scan;Pfam:PF07690; E()=6.9E-51;score=173.2;query 25-318;description=MFS_1; tmhmm; query 1-453; glucarate transporter complement(3105248..3106606) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761953 YP_005233952.1 CDS STMMW_29261 NC_016854.1 3106686 3106937 D hypothetical protein 3106686..3106937 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761954 YP_005233953.1 CDS STMMW_29271 NC_016854.1 3107087 3107536 R pfam_scan;Pfam:PF00258; E()=2.2E-27;score=95.6;query6- 140;description=Flavodoxin_1; hypothetical protein complement(3107087..3107536) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761955 YP_005233954.1 CDS STMMW_29281 NC_016854.1 3107555 3108337 R pfam_scan;Pfam:PF00849; E()=9.7E-34;score=116.4;query 11-170;description=PseudoU_synth_2; putative RNA pseudouridylate synthase complement(3107555..3108337) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761956 YP_005233955.1 CDS STMMW_29291 NC_016854.1 3108337 3108666 R pfam_scan;Pfam:PF04287; E()=3.8E-34;score=116.1;query 5-104;description=DUF446; hypothetical protein complement(3108337..3108666) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761957 YP_005233956.1 CDS STMMW_29301 NC_016854.1 3109278 3109823 R pfam_scan;Pfam:PF07348; E()=4.0E-73;score=244.2;query 8-180;description=Syd; Syd protein complement(3109278..3109823) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761958 YP_005233957.1 CDS STMMW_29311 NC_016854.1 3109892 3110740 D pfam_scan;Pfam:PF01227; E()=3.4E-12;score=45.6;query185- 266;description=GTP_cyclohydroI; hypothetical protein 3109892..3110740 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761959 YP_005233958.1 CDS STMMW_29321 NC_016854.1 3110853 3112217 D pfam_scan;Pfam:PF03641; E()=1.3E-27;score=95.8;query190- 331;description=Lysine_decarbox; hypothetical protein 3110853..3112217 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761960 YP_005233959.1 CDS STMMW_29331 NC_016854.1 3112782 3114071 D pfam_scan;Pfam:PF03222; E()=2.7E-11;score=42.4;query30- 331;description=Trp_Tyr_perm; tmhmm; query 1-430; putative serine transporter 3112782..3114071 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761961 YP_005233960.1 CDS STMMW_29341 NC_016854.1 3114130 3115497 D pfam_scan;Pfam:PF03313; E()=1.4E-105;score=352.0;query 183-449;description=SDH_alpha; pfam_scan;Pfam:PF03315; E()=3.5E-58;score=195.7;query 3-157;description=SDH_beta; L-serine dehydratase 2 (L-serine deaminase 2) 3114130..3115497 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761962 YP_005233961.1 CDS STMMW_29351 NC_016854.1 3115608 3116423 D pfam_scan;Pfam:PF01367; E()=1.4E-23;score=82.5;query180- 269;description=5_3_exonuc; pfam_scan;Pfam:PF02739; E()=1.6E-24;score=85.7;query47- 161;description=5_3_exonuc_N; 5'-3' exonuclease 3115608..3116423 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761963 YP_005233962.1 CDS STMMW_29361 NC_016854.1 3116515 3117663 R pfam_scan;Pfam:PF00465; E()=4.2E-119;score=397.1;query 11-374;description=Fe-ADH; 1,2-propanediol oxidoreductase (lactaldehyde reductase) complement(3116515..3117663) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761964 YP_005233963.1 CDS STMMW_29371 NC_016854.1 3117680 3118327 R pfam_scan;Pfam:PF00596; E()=3.3E-57;score=192.5;query 8-182;description=Aldolase_II; fuculose-1-phosphate aldolase complement(3117680..3118327) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761965 YP_005233964.1 CDS STMMW_29381 NC_016854.1 3118882 3120198 D pfam_scan;Pfam:PF07690; E()=5.0E-23;score=81.6;query32-390;description=MFS_1; tmhmm; query 1-439; L-fucose permease 3118882..3120198 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761966 YP_005233965.1 CDS STMMW_29391 NC_016854.1 3120230 3122005 D pfam_scan;Pfam:PF07881; E()=9.1E-91;score=301.6;query 6-174;description=Fucose_iso_N1; pfam_scan;Pfam:PF02952; E()=8.5E-57;score=190.5;query 356-554;description=Fucose_iso_C; pfam_scan;Pfam:PF07882; E()=1.2E-79;score=266.1;query 175-355;description=Fucose_iso_N2; L-fuculose isomerase 3120230..3122005 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761967 YP_005233966.1 CDS STMMW_29401 NC_016854.1 3122106 3123524 D pfam_scan;Pfam:PF02782; E()=1.4E-23;score=83.3;query258-438;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=6.2E-77;score=257.7;query 5-249;description=FGGY_N; L-fuculose kinase 3122106..3123524 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761968 YP_005233967.1 CDS STMMW_29411 NC_016854.1 3123526 3123948 D pfam_scan;Pfam:PF05025; E()=1.4E-33;score=115.5;query 3-139;description=RbsD_FucU; fuscose operon fucU protein 3123526..3123948 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761969 YP_005233968.1 CDS STMMW_29421 NC_016854.1 3124006 3124716 D pfam_scan;Pfam:PF00455; E()=9.4E-50;score=167.9;query 78-232;description=DeoR; pfam_scan;Pfam:PF08220; E()=1.5E-18;score=65.4;query5-60;description=HTH_DeoR; l-fucose operon activator 3124006..3124716 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761970 YP_005233969.1 CDS STMMW_29431 NC_016854.1 3124775 3125875 R pfam_scan;Pfam:PF01728; E()=1.2E-9;score=37.9;query 186-278;description=FtsJ; hypothetical protein complement(3124775..3125875) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761971 YP_005233970.1 CDS STMMW_29441 NC_016854.1 3125868 3126263 R pfam_scan;Pfam:PF04241; E()=9.0E-27;score=92.7;query19-107;description=DUF423; tmhmm; query 1-132; membrane protein complement(3125868..3126263) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761972 YP_005233971.1 CDS STMMW_29451 NC_016854.1 3126282 3127199 R pfam_scan;Pfam:PF00126; E()=2.6E-21;score=74.8;query8-67;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.3E-43;score=146.4;query 91-292;description=LysR_substrate; regulatory protein for glycine cleavage pathway complement(3126282..3127199) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761973 YP_005233972.1 CDS STMMW_29461 NC_016854.1 3127546 3127773 R pfam_scan;Pfam:PF06004; E()=2.8E-24;score=84.1;query24-71;description=DUF903; tmhmm; query 1-76; lipoprotein complement(3127546..3127773) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761974 YP_005233973.1 CDS STMMW_29471 NC_016854.1 3127966 3129171 D pfam_scan;Pfam:PF00266; E()=1.2E-144;score=481.2;query 21-388;description=Aminotran_5; aminotransferase 3127966..3129171 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761975 YP_005233974.1 CDS STMMW_29481 NC_016854.1 3129171 3129614 D pfam_scan;Pfam:PF02657; E()=1.4E-44;score=150.2;query 23-143;description=SufE; hypothetical protein 3129171..3129614 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761976 YP_005233975.1 CDS STMMW_29491 NC_016854.1 3129914 3130801 D pfam_scan;Pfam:PF00892; E()=1.5E-8;score=34.4;query 8-132;description=DUF6; tmhmm; query 1-296; hypothetical protein 3129914..3130801 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761977 YP_005233976.1 CDS STMMW_29501 NC_016854.1 3130853 3131659 R pfam_scan;Pfam:PF00899; E()=3.8E-41;score=139.7;query 30-157;description=ThiF; tmhmm; query 1-269; hypothetical protein complement(3130853..3131659) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761978 YP_005233977.1 CDS STMMW_29511 NC_016854.1 3131769 3132866 R pfam_scan;Pfam:PF06725; E()=2.2E-23;score=81.0;query277-354;description=3D; pfam_scan;Pfam:PF03562; E()=7.8E-45;score=152.1;query 125-257;description=MltA; membrane-bound lytic murein transglycosylase A complement(3131769..3132866) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761979 YP_005233978.1 CDS STMMW_29521 NC_016854.1 3133366 3134619 R pfam_scan;Pfam:PF01520; E()=2.8E-54;score=183.5;query 190-404;description=Amidase_3; pfam_scan;Pfam:PF11741; E()=1.7E-30;score=104.6;query 27-130;description=AMIN; N-acetylmuramoyl-L-alanine amidase complement(3133366..3134619) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761980 YP_005233979.1 CDS STMMW_29531 NC_016854.1 3134852 3136183 D pfam_scan;Pfam:PF00583; E()=1.3E-8;score=34.5;query 342-414;description=Acetyltransf_1; pfam_scan;Pfam:PF00696; E()=1.6E-27;score=96.4;query26-269;description=AA_kinase; N-acetylglutamate synthase; NAGS; amino-acid acetyltransferase; AGS 3134852..3136183 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761981 YP_005233980.1 CDS STMMW_29541 NC_016854.1 3136286 3138121 R pfam_scan;Pfam:PF01443; E()=3.0E-6;score=26.4;query 530-580;description=Viral_helicase1; pfam_scan;Pfam:PF05127; E()=4.5E-9;score=35.9;query 168-285;description=DUF699; exonuclease V alpha-subunit complement(3136286..3138121) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761982 YP_005233981.1 CDS STMMW_29551 NC_016854.1 3138118 3141663 R pfam_scan;Pfam:PF00580; E()=7.8E-86;score=288.3;query 15-691;description=UvrD-helicase; exonuclease V subunit complement(3138118..3141663) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761983 YP_005233982.1 CDS STMMW_29561 NC_016854.1 3141656 3144544 R pfam_scan;Pfam:PF00675; E()=2.0E-38;score=130.7;query 55-191;description=Peptidase_M16; pfam_scan;Pfam:PF05193; E()=1.6E-23;score=82.8;query216- 393;description=Peptidase_M16_C; protease III complement(3141656..3144544) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761984 YP_005233983.1 CDS STMMW_29571 NC_016854.1 3144722 3148093 R pfam_scan;Pfam:PF04257; E()=0.0;score=1323.3;query 1-1045;description=Exonuc_V_gamma; exonuclease V subunit complement(3144722..3148093) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761985 YP_005233984.1 CDS STMMW_29581 NC_016854.1 3148109 3148429 R tmhmm; query 1-107; prepilin peptidase dependent protein C precursor complement(3148109..3148429) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761986 YP_005233985.1 CDS STMMW_29591 NC_016854.1 3148414 3148821 R pfam_scan;Pfam:PF10713; E()=6.1E-44;score=148.6;query 15-135;description=DUF2509; tmhmm; query 1-136; hypothetical protein complement(3148414..3148821) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761987 YP_005233986.1 CDS STMMW_29601 NC_016854.1 3148818 3149381 R prepilin peptidase dependent protein B precursor complement(3148818..3149381) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761988 YP_005233987.1 CDS STMMW_29611 NC_016854.1 3149372 3149842 R tmhmm; query 1-157; prepilin peptidase dependent protein a precursor complement(3149372..3149842) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761989 YP_005233988.1 CDS STMMW_29621 NC_016854.1 3150027 3150821 R pfam_scan;Pfam:PF00303; E()=8.0E-129;score=427.9;query 2-264;description=Thymidylat_synt; TSase; thymidylate synthase; thymidylate synthetase; TS complement(3150027..3150821) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761990 YP_005233989.1 CDS STMMW_29631 NC_016854.1 3150828 3151703 R pfam_scan;Pfam:PF01790; E()=3.0E-102;score=340.8;query 11-283;description=LGT; tmhmm; query 1-292; prolipoprotein diacylglyceryl transferase complement(3150828..3151703) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761991 YP_005233990.1 CDS STMMW_29641 NC_016854.1 3151919 3154165 R pfam_scan;Pfam:PF05524; E()=2.4E-25;score=88.9;query172-295;description=PEP- utilisers_N; pfam_scan;Pfam:PF01590; E()=2.3E-24;score=85.9;query18-153;description=GAF; pfam_scan;Pfam:PF00391; E()=2.2E-19;score=68.4;query318-391;description=PEP- utilizers; pfam_scan;Pfam:PF02896; E()=6.0E-113;score=376.4;query 419-707;description=PEP-utilizers_C; phosphoenolpyruvate-protein phosphotransferase complement(3151919..3154165) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761992 YP_005233991.1 CDS STMMW_29651 NC_016854.1 3154178 3154708 R pfam_scan;Pfam:PF00293; E()=1.2E-25;score=89.4;query8-149;description=NUDIX; hypothetical protein complement(3154178..3154708) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761993 YP_005233992.1 CDS STMMW_29661 NC_016854.1 3155391 3156086 D pfam_scan;Pfam:PF02976; E()=1.1E-43;score=146.5;query 58-157;description=MutH; DNA mismatch repair protein mutH; Methyl-directed mismatch repair protein; DNA mismatch repair protein 3155391..3156086 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761994 YP_005233993.1 CDS STMMW_29671 NC_016854.1 3156250 3156981 D pfam_scan;Pfam:PF03741; E()=1.3E-48;score=164.6;query 23-209;description=TerC; tmhmm; query 1-244; hypothetical protein 3156250..3156981 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761995 YP_005233994.1 CDS STMMW_29681 NC_016854.1 3157151 3157369 D pfam_scan;Pfam:PF06004; E()=3.6E-24;score=83.7;query23-72;description=DUF903; lipoprotein 3157151..3157369 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761996 YP_005233995.1 CDS STMMW_29691 NC_016854.1 3157560 3158600 D pfam_scan;Pfam:PF00248; E()=6.7E-73;score=244.6;query 16-337;description=Aldo_ket_red; oxidoreductase 3157560..3158600 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761997 YP_005233996.1 CDS STMMW_29701 NC_016854.1 3158687 3159889 R pfam_scan;Pfam:PF07690; E()=2.6E-17;score=62.8;query20-349;description=MFS_1; tmhmm; query 1-401; hypothetical protein complement(3158687..3159889) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761998 YP_005233997.1 CDS STMMW_29711 NC_016854.1 3159882 3162041 R pfam_scan;Pfam:PF01553; E()=3.6E-24;score=84.8;query15- 137;description=Acyltransferase; pfam_scan;Pfam:PF00501; E()=6.0E-74;score=248.6;query 233-634;description=AMP-binding; 2-acylglycerophosphoethanolamine acyltransferase complement(3159882..3162041) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761999 YP_005233998.1 CDS STMMW_29721 NC_016854.1 3162322 3162468 R hypothetical protein complement(3162322..3162468) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762000 YP_005233999.1 CDS STMMW_29731 NC_016854.1 3162634 3163662 D pfam_scan;Pfam:PF00356; E()=1.4E-18;score=66.2;query3-48;description=LacI; pfam_scan;Pfam:PF00532; E()=3.7E-26;score=91.5;query60- 295;description=Peripla_BP_1; galactose operon repressor 3162634..3163662 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762001 YP_005234000.1 CDS STMMW_29751 NC_016854.1 3164701 3165963 R pfam_scan;Pfam:PF00278; E()=1.4E-26;score=92.0;query279- 396;description=Orn_DAP_Arg_deC; pfam_scan;Pfam:PF02784; E()=2.1E-57;score=193.8;query 34-276;description=Orn_Arg_deC_N; diaminopimelate decarboxylase complement(3164701..3165963) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762003 YP_005234001.1 CDS STMMW_29761 NC_016854.1 3166081 3167016 D pfam_scan;Pfam:PF00126; E()=4.5E-18;score=64.5;query6-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.6E-44;score=150.4;query 92-294;description=LysR_substrate; transcriptional activator protein LysR 3166081..3167016 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762004 YP_005234002.1 CDS STMMW_29771 NC_016854.1 3166988 3167695 R pfam_scan;Pfam:PF01177; E()=1.3E-40;score=138.9;query 7-224;description=Asp_Glu_race; hypothetical protein complement(3166988..3167695) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762005 YP_005234003.1 CDS STMMW_29781 NC_016854.1 3167808 3169226 R pfam_scan;Pfam:PF00083; E()=3.3E-135;score=450.7;query 26-459;description=Sugar_tr; tmhmm; query 1-473; arabinose-proton symporter complement(3167808..3169226) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762006 YP_005234004.1 CDS STMMW_29791 NC_016854.1 3169580 3170341 R pfam_scan;Pfam:PF00106; E()=4.4E-21;score=75.2;query11-175;description=adh_short; 2-keto-3-deoxygluconate oxidoreductase complement(3169580..3170341) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762007 YP_005234005.1 CDS STMMW_29801 NC_016854.1 3170398 3171234 R pfam_scan;Pfam:PF04962; E()=5.1E-21;score=74.8;query72-272;description=KduI; 5-keto-4-deoxyuronate isomerase; DKI isomerase; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase complement(3170398..3171234) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762008 YP_005234006.1 CDS STMMW_29811 NC_016854.1 3171664 3172842 R pfam_scan;Pfam:PF00108; E()=8.2E-111;score=369.0;query 1-261;description=Thiolase_N; pfam_scan;Pfam:PF02803; E()=2.4E-54;score=182.1;query 270-391;description=Thiolase_C; acetyl-CoA acetyltransferase complement(3171664..3172842) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762009 YP_005234007.1 CDS STMMW_29821 NC_016854.1 3172965 3173828 R pfam_scan;Pfam:PF00126; E()=1.5E-17;score=62.8;query6-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.3E-23;score=80.6;query89- 286;description=LysR_substrate; regulatory protein complement(3172965..3173828) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762010 YP_005234008.1 CDS STMMW_29831 NC_016854.1 3173905 3174387 D pfam_scan;Pfam:PF05232; E()=1.5E-23;score=81.5;query18-81;description=BTP; tmhmm; query 1-161; hypothetical protein 3173905..3174387 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762011 YP_005234009.1 CDS STMMW_29841 NC_016854.1 3174529 3175758 D pfam_scan;Pfam:PF03222; E()=6.2E-10;score=37.9;query16- 379;description=Trp_Tyr_perm; tmhmm; query 1-410; amino acid transport protein 3174529..3175758 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762012 YP_005234010.1 CDS STMMW_29851 NC_016854.1 3175789 3176061 R pfam_scan;Pfam:PF02583; E()=1.5E-23;score=81.9;query6-88;description=DUF156; hypothetical protein complement(3175789..3176061) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762013 YP_005234011.1 CDS STMMW_29861 NC_016854.1 3177224 3177922 R hypothetical protein complement(3177224..3177922) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762014 YP_005234012.1 CDS STMMW_29871 NC_016854.1 3177969 3178529 R pfam_scan;Pfam:PF07180; E()=1.3E-84;score=280.9;query 37-182;description=DUF1401; hypothetical protein complement(3177969..3178529) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762015 YP_005234013.1 CDS STMMW_29881 NC_016854.1 3178625 3179701 R Signal peptide; signalp; query 1-30;cleavage_site_probability=0.999; 1.000; hypothetical protein complement(3178625..3179701) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762016 YP_005234014.1 CDS STMMW_29891 NC_016854.1 3179698 3180441 R pfam_scan;Pfam:PF00345; E()=6.3E-37;score=125.9;query 25-143;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=4.6E-11;score=42.3;query153- 228;description=Pili_assembly_C; fimbrial chaperone protein complement(3179698..3180441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762017 YP_005234015.1 CDS STMMW_29901 NC_016854.1 3180482 3182971 R pfam_scan;Pfam:PF00577; E()=2.1E-228;score=759.4;query 23-815;description=Usher; outer membrane fimbrial usher protein complement(3180482..3182971) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762018 YP_005234016.1 CDS STMMW_29911 NC_016854.1 3183091 3183801 R pfam_scan;Pfam:PF00419; E()=1.0E-31;score=110.1;query 77-235;description=Fimbrial; tmhmm; query 1-237; fimbrial protein complement(3183091..3183801) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762019 YP_005234017.1 CDS STMMW_29921 NC_016854.1 3184394 3185026 R pfam_scan;Pfam:PF10938; E()=1.6E-48;score=164.3;query 43-196;description=YfdX; hypothetical protein complement(3184394..3185026) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762020 YP_005234018.1 CDS STMMW_29931 NC_016854.1 3185073 3185609 R pfam_scan;Pfam:PF06316; E()=6.7E-14;score=51.5;query4-111;description=Ail_Lom; outer membrane protein (associated with virulence) complement(3185073..3185609) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762021 YP_005234019.1 CDS STMMW_29941 NC_016854.1 3186415 3186813 R pfam_scan;Pfam:PF01850; E()=8.4E-21;score=74.4;query5-131;description=PIN; hypothetical protein complement(3186415..3186813) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762022 YP_005234020.1 CDS STMMW_29951 NC_016854.1 3186813 3187040 R hypothetical protein complement(3186813..3187040) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762023 YP_005234021.1 CDS STMMW_29961 NC_016854.1 3187217 3187468 D Signal peptide; signalp; query 1-29;cleavage_site_probability=0.628; 0.676; endonuclease 3187217..3187468 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762024 YP_005234022.1 CDS STMMW_29971 NC_016854.1 3187743 3188549 D pfam_scan;Pfam:PF07313; E()=3.0E-84;score=280.8;query 63-262;description=DUF1460; hypothetical protein 3187743..3188549 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762025 YP_005234023.1 CDS STMMW_29981 NC_016854.1 3188834 3189592 R pfam_scan;Pfam:PF01551; E()=2.8E-32;score=110.1;query 146-239;description=Peptidase_M23; pfam_scan;Pfam:PF01476; E()=2.1E-16;score=59.0;query42-84;description=LysM; lipoprotein complement(3188834..3189592) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762026 YP_005234024.1 CDS STMMW_29991 NC_016854.1 3189857 3190402 D pfam_scan;Pfam:PF00293; E()=1.3E-17;score=63.5;query32-160;description=NUDIX; IPP:DMAPP isomerase; Isopentenyl pyrophosphate isomerase; isopentenyl-diphosphate delta-isomerase; IPP isomerase 3189857..3190402 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762027 YP_005234025.1 CDS STMMW_30001 NC_016854.1 3190478 3191995 R pfam_scan;Pfam:PF01336; E()=7.7E-16;score=57.2;query68-146;description=tRNA_anti; pfam_scan;Pfam:PF00152; E()=3.5E-92;score=308.9;query 163-502;description=tRNA-synt_2; lysine--tRNA ligase; lysyl tRNA synthetase (LysRS); lysyl-tRNA synthetase; LysRS complement(3190478..3191995) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762028 YP_005234026.1 CDS STMMW_30011 NC_016854.1 3192005 3192886 R pfam_scan;Pfam:PF00472; E()=2.2E-42;score=143.2;query 154-265;description=RF-1; pfam_scan;Pfam:PF03462; E()=1.2E-37;score=127.9;query 16-123;description=PCRF; peptide chain release factor 2 (RF-2) complement(3192005..3192886) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762029 YP_005234027.1 CDS STMMW_30021 NC_016854.1 3193208 3194941 R pfam_scan;Pfam:PF01368; E()=2.1E-33;score=115.1;query 69-234;description=DHH; pfam_scan;Pfam:PF02272; E()=6.1E-14;score=51.2;query382-449;description=DHHA1; single-stranded DNA-specific exonuclease complement(3193208..3194941) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762030 YP_005234028.1 CDS STMMW_30031 NC_016854.1 3194947 3195621 R pfam_scan;Pfam:PF10411; E()=4.2E-17;score=61.0;query13-64;description=DsbC_N; thiol:disulfide interchange protein complement(3194947..3195621) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762031 YP_005234029.1 CDS STMMW_30041 NC_016854.1 3195684 3196580 R pfam_scan;Pfam:PF00589; E()=9.6E-54;score=181.5;query 122-288;description=Phage_integrase; pfam_scan;Pfam:PF02899; E()=2.0E-24;score=85.0;query8- 90;description=Phage_integr_N; tyrosine recombinase XerD; site-specific integrase/recombinase complement(3195684..3196580) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762032 YP_005234030.1 CDS STMMW_30051 NC_016854.1 3196693 3197214 D pfam_scan;Pfam:PF00258; E()=3.7E-22;score=78.7;query5- 160;description=Flavodoxin_1; flavodoxin II 3196693..3197214 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762033 YP_005234031.1 CDS STMMW_30061 NC_016854.1 3197267 3197680 R pfam_scan;Pfam:PF07254; E()=3.2E-60;score=201.3;query 2-131;description=DUF1434; tmhmm; query 1-138; hypothetical protein complement(3197267..3197680) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762034 YP_005234032.1 CDS STMMW_30071 NC_016854.1 3197661 3197927 R pfam_scan;Pfam:PF03937; E()=3.7E-21;score=73.8;query11-60;description=DUF339; hypothetical protein complement(3197661..3197927) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762035 YP_005234033.1 CDS STMMW_30081 NC_016854.1 3198177 3199157 D pfam_scan;Pfam:PF01571; E()=9.8E-25;score=86.6;query25-217;description=GCV_T; hypothetical protein 3198177..3199157 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762036 YP_005234034.1 CDS STMMW_30091 NC_016854.1 3199273 3199932 R pfam_scan;Pfam:PF03006; E()=2.3E-65;score=219.3;query 11-209;description=HlyIII; tmhmm; query 1-220; hypothetical protein complement(3199273..3199932) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762037 YP_005234035.1 CDS STMMW_30101 NC_016854.1 3200096 3200407 R pfam_scan;Pfam:PF04266; E()=1.2E-20;score=73.1;query6-101;description=ASCH; hypothetical protein complement(3200096..3200407) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762038 YP_005234036.1 CDS STMMW_30111 NC_016854.1 3200566 3201999 D pfam_scan;Pfam:PF00232; E()=3.5E-132;score=441.0;query 4-474;description=Glyco_hydro_1; 6-phospho-beta-glucosidase 3200566..3201999 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762039 YP_005234037.1 CDS STMMW_30121 NC_016854.1 3202047 3202940 R Signal peptide; signalp; query 1-21;cleavage_site_probability=0.793; 0.999; hypothetical protein complement(3202047..3202940) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762040 YP_005234038.1 CDS STMMW_30131 NC_016854.1 3203396 3206269 R pfam_scan;Pfam:PF02347; E()=1.3E-189;score=630.2;query 16-440;description=GDC-P; glycine cleavage system P-protein; glycine dehydrogenase (decarboxylating); glycine dehydrogenase [decarboxylating]; Glycine decarboxylase complement(3203396..3206269) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762041 YP_005234039.1 CDS STMMW_30141 NC_016854.1 3206432 3206821 R pfam_scan;Pfam:PF01597; E()=1.5E-51;score=172.9;query 8-128;description=GCV_H; glycine cleavage system H protein; Glycine cleavage system H protein. glycine cleavage system H protein complement(3206432..3206821) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762042 YP_005234040.1 CDS STMMW_30151 NC_016854.1 3206847 3207941 R pfam_scan;Pfam:PF08669; E()=8.0E-21;score=73.7;query262-354;description=GCV_T_C; pfam_scan;Pfam:PF01571; E()=1.6E-67;score=226.4;query 46-254;description=GCV_T; Glycine cleavage system T protein. aminomethyltransferase EC 2.1.2.10; Glycine cleavage system T protein complement(3206847..3207941) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762043 YP_005234041.1 CDS STMMW_30161 NC_016854.1 3208396 3209598 R pfam_scan;Pfam:PF01494; E()=4.1E-30;score=104.5;query 4-345;description=FAD_binding_3; monooxygenase complement(3208396..3209598) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762044 YP_005234042.1 CDS STMMW_30171 NC_016854.1 3209724 3210902 R pfam_scan;Pfam:PF01494; E()=5.2E-19;score=68.0;query2- 319;description=FAD_binding_3; 2-octaprenyl-6-methoxyphenol hydroxylase complement(3209724..3210902) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762045 YP_005234043.1 CDS STMMW_30181 NC_016854.1 3210899 3212041 R pfam_scan;Pfam:PF00557; E()=1.4E-66;score=223.6;query 124-353;description=Peptidase_M24; pfam_scan;Pfam:PF05195; E()=7.4E-15;score=54.1;query2-75;description=AMP_N; proline aminopeptidase II complement(3210899..3212041) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762046 YP_005234044.1 CDS STMMW_30191 NC_016854.1 3212241 3212825 R pfam_scan;Pfam:PF03695; E()=3.0E-66;score=221.9;query 9-194;description=UPF0149; hypothetical protein complement(3212241..3212825) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762047 YP_005234045.1 CDS STMMW_30201 NC_016854.1 3212986 3213315 D pfam_scan;Pfam:PF05164; E()=6.9E-24;score=83.4;query6-91;description=ZapA; hypothetical protein 3212986..3213315 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762048 YP_005234046.1 CDS STMMW_30211 NC_016854.1 3213681 3214157 D pfam_scan;Pfam:PF01812; E()=4.6E-42;score=143.3;query 3-152;description=5-FTHF_cyc-lig; hypothetical protein 3213681..3214157 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762049 YP_005234047.1 CDS STMMW_30221 NC_016854.1 3214538 3215770 R pfam_scan;Pfam:PF01842; E()=4.5E-9;score=35.9;query 343-402;description=ACT; pfam_scan;Pfam:PF02826; E()=9.9E-51;score=171.5;query 119-294;description=2-Hacid_dh_C; pfam_scan;Pfam:PF00389; E()=1.8E-38;score=131.3;query 15-326;description=2-Hacid_dh; D-3-phosphoglycerate dehydrogenase complement(3214538..3215770) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762050 YP_005234048.1 CDS STMMW_30231 NC_016854.1 3216036 3216695 R pfam_scan;Pfam:PF06026; E()=2.3E-64;score=215.9;query 49-215;description=Rib_5-P_isom_A; Phosphoriboisomerase A; ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A; PRI complement(3216036..3216695) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762051 YP_005234049.1 CDS STMMW_30241 NC_016854.1 3216849 3217742 D pfam_scan;Pfam:PF00126; E()=3.0E-18;score=65.0;query7-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.9E-13;score=49.0;query93- 289;description=LysR_substrate; chromosome initiation inhibitor; chromosome intitiation inhibitor; OriC replication inhibitor 3216849..3217742 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762052 YP_005234050.1 CDS STMMW_30251 NC_016854.1 3217754 3218005 D hypothetical protein 3217754..3218005 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762053 YP_005234051.1 CDS STMMW_30261 NC_016854.1 3218008 3218754 R pfam_scan;Pfam:PF04402; E()=4.9E-55;score=186.5;query 30-233;description=SIMPL; hypothetical protein complement(3218008..3218754) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762054 YP_005234052.1 CDS STMMW_30271 NC_016854.1 3218848 3219483 R pfam_scan;Pfam:PF01810; E()=2.4E-54;score=183.3;query 14-201;description=LysE; tmhmm; query 1-212; membrane transport protein complement(3218848..3219483) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762055 YP_005234053.1 CDS STMMW_30281 NC_016854.1 3219683 3220543 R pfam_scan;Pfam:PF05552; E()=1.2E-14;score=53.0;query15-66;description=TM_helix; pfam_scan;Pfam:PF00924; E()=2.1E-66;score=222.7;query 71-269;description=MS_channel; tmhmm; query 1-287; hypothetical protein complement(3219683..3220543) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762056 YP_005234054.1 CDS STMMW_30291 NC_016854.1 3220770 3221849 R pfam_scan;Pfam:PF01116; E()=6.5E-86;score=287.3;query 16-355;description=F_bP_aldolase; fructose 1,6-bisphosphate aldolase complement(3220770..3221849) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762057 YP_005234055.1 CDS STMMW_30301 NC_016854.1 3221951 3223114 R pfam_scan;Pfam:PF00162; E()=5.7E-148;score=492.5;query 6-373;description=PGK; phosphoglycerate kinase complement(3221951..3223114) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762058 YP_005234056.1 CDS STMMW_30311 NC_016854.1 3223136 3224182 R pfam_scan;Pfam:PF00044; E()=6.2E-55;score=184.8;query 3-155;description=Gp_dh_N; pfam_scan;Pfam:PF02800; E()=5.8E-55;score=184.9;query 161-316;description=Gp_dh_C; D-erythrose 4-phosphate dehydrogenase complement(3223136..3224182) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762059 YP_005234057.1 CDS STMMW_30321 NC_016854.1 3224556 3224981 D pfam_scan;Pfam:PF03479; E()=1.2E-27;score=95.9;query12-124;description=DUF296; hypothetical protein 3224556..3224981 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762060 YP_005234058.1 CDS STMMW_30331 NC_016854.1 3225007 3225585 D tmhmm; query 1-193; hypothetical protein 3225007..3225585 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762061 YP_005234059.1 CDS STMMW_30341 NC_016854.1 3225586 3226293 D pfam_scan;Pfam:PF02361; E()=6.9E-9;score=34.8;query 11-202;description=CbiQ; tmhmm; query 1-236; hypothetical protein 3225586..3226293 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762062 YP_005234060.1 CDS STMMW_30351 NC_016854.1 3226281 3226958 D pfam_scan;Pfam:PF00005; E()=6.6E-28;score=97.7;query30-198;description=ABC_tran; ABC-transport protein, ATP-binding component 3226281..3226958 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762063 YP_005234061.1 CDS STMMW_30371 NC_016854.1 3227651 3229642 R pfam_scan;Pfam:PF00456; E()=1.1E-169;score=562.9;query 4-334;description=Transketolase_N; pfam_scan;Pfam:PF02779; E()=1.1E-51;score=174.2;query 354-524;description=Transket_pyr; pfam_scan;Pfam:PF02780; E()=1.9E-9;score=36.9;query 549-654;description=Transketolase_C; transketolase complement(3227651..3229642) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762065 YP_005234062.1 CDS STMMW_30381 NC_016854.1 3229918 3230676 D pfam_scan;Pfam:PF01435; E()=2.2E-30;score=105.1;query 82-247;description=Peptidase_M48; hypothetical protein 3229918..3230676 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762066 YP_005234063.1 CDS STMMW_30391 NC_016854.1 3230777 3231697 R pfam_scan;Pfam:PF00491; E()=8.5E-94;score=313.5;query 33-297;description=Arginase; agmatinase; agmatine ureohydrolase; AUH complement(3230777..3231697) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762067 YP_005234064.1 CDS STMMW_30401 NC_016854.1 3231902 3232792 R pfam_scan;Pfam:PF00561; E()=5.5E-17;score=61.6;query74- 271;description=Abhydrolase_1; tmhmm; query 1-297; putative hydrolase complement(3231902..3232792) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762068 YP_005234065.1 CDS STMMW_30411 NC_016854.1 3233072 3233545 R pfam_scan;Pfam:PF04074; E()=6.4E-32;score=110.2;query 1-150;description=DUF386; hypothetical protein complement(3233072..3233545) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762069 YP_005234066.1 CDS STMMW_30421 NC_016854.1 3233584 3234591 R pfam_scan;Pfam:PF02615; E()=1.0E-103;score=346.2;query 6-334;description=Ldh_2; putative oxidoreductase complement(3233584..3234591) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762070 YP_005234067.1 CDS STMMW_30431 NC_016854.1 3234605 3235621 R pfam_scan;Pfam:PF08240; E()=4.3E-35;score=119.3;query 25-130;description=ADH_N; pfam_scan;Pfam:PF00107; E()=2.9E-26;score=91.8;query160- 298;description=ADH_zinc_N; zinc binding dehydrogenase complement(3234605..3235621) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762071 YP_005234068.1 CDS STMMW_30441 NC_016854.1 3235624 3237096 R pfam_scan;Pfam:PF01232; E()=1.5E-39;score=135.4;query 27-189;description=Mannitol_dh; pfam_scan;Pfam:PF08125; E()=8.6E-75;score=250.4;query 217-462;description=Mannitol_dh_C; putative oxidoreductase complement(3235624..3237096) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762072 YP_005234069.1 CDS STMMW_30451 NC_016854.1 3238338 3239138 R pfam_scan;Pfam:PF00392; E()=7.0E-19;score=67.1;query29-88;description=GntR; pfam_scan;Pfam:PF07729; E()=2.0E-23;score=82.3;query111-241;description=FCD; GntR family transcriptional regulator complement(3238338..3239138) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762073 YP_005234070.1 CDS STMMW_30461 NC_016854.1 3239292 3240023 R Signal peptide; signalp; query 1-26;cleavage_site_probability=0.301; 0.997; putative outer membrane lipoprotein complement(3239292..3240023) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762074 YP_005234071.1 CDS STMMW_30471 NC_016854.1 3240167 3242080 R pfam_scan;Pfam:PF00278; E()=1.3E-18;score=66.3;query453- 564;description=Orn_DAP_Arg_deC; pfam_scan;Pfam:PF02784; E()=1.1E-59;score=201.2;query 79-347;description=Orn_Arg_deC_N; biosynthetic arginine decarboxylase; ADC complement(3240167..3242080) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762075 YP_005234072.1 CDS STMMW_30481 NC_016854.1 3242152 3242283 R pfam_scan;Pfam:PF11036; E()=2.6E-31;score=105.9;query 1-43;description=YqgB; hypothetical protein complement(3242152..3242283) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762076 YP_005234073.1 CDS STMMW_30501 NC_016854.1 3242578 3242877 R pfam_scan;Pfam:PF10885; E()=1.1E-53;score=178.4;query 1-89;description=DUF2684; tmhmm; query 1-100; putative inner membrane protein complement(3242578..3242877) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762077 YP_005234074.1 CDS STMMW_30511 NC_016854.1 3242933 3244087 D pfam_scan;Pfam:PF00438; E()=7.2E-46;score=154.0;query 3-101;description=S-AdoMet_synt_N; pfam_scan;Pfam:PF02773; E()=2.1E-75;score=251.0;query 233-370;description=S-AdoMet_synt_C; pfam_scan;Pfam:PF02772; E()=1.2E-52;score=176.5;query 114-231;description=S-AdoMet_synt_M; MAT; S-adenosylmethionine synthetase; methionine adenosyltransferase; AdoMet synthetase 3242933..3244087 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762078 YP_005234075.1 CDS STMMW_30521 NC_016854.1 3244580 3245974 D pfam_scan;Pfam:PF00083; E()=1.6E-145;score=484.7;query 18-449;description=Sugar_tr; tmhmm; query 1-465; galactose-proton symport (galactose transporter) 3244580..3245974 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762079 YP_005234076.1 CDS STMMW_30531 NC_016854.1 3246053 3246550 D pfam_scan;Pfam:PF10263; E()=6.0E-37;score=125.9;query 20-163;description=SprT-like; protein; Protein sprT 3246053..3246550 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762080 YP_005234077.1 CDS STMMW_30541 NC_016854.1 3246645 3247352 D pfam_scan;Pfam:PF04231; E()=2.7E-87;score=291.7;query 33-230;description=Endonuclease_1; endonuclease I 3246645..3247352 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762081 YP_005234078.1 CDS STMMW_30551 NC_016854.1 3247381 3248160 D pfam_scan;Pfam:PF04452; E()=9.3E-76;score=253.7;query 35-253;description=Methyltrans_RNA; hypothetical protein 3247381..3248160 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762082 YP_005234079.1 CDS STMMW_30561 NC_016854.1 3248180 3249127 D pfam_scan;Pfam:PF02951; E()=9.5E-52;score=173.6;query 2-120;description=GSH-S_N; pfam_scan;Pfam:PF02955; E()=6.9E-80;score=266.3;query 124-297;description=GSH-S_ATP; GSHase; Glutathione synthase; glutathione synthetase; GSH synthetase 3248180..3249127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762083 YP_005234080.1 CDS STMMW_30571 NC_016854.1 3249343 3249906 D pfam_scan;Pfam:PF02622; E()=1.2E-57;score=193.2;query 11-174;description=DUF179; hypothetical protein 3249343..3249906 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762084 YP_005234081.1 CDS STMMW_30581 NC_016854.1 3249906 3250322 D pfam_scan;Pfam:PF03652; E()=2.3E-46;score=156.7;query 4-136;description=UPF0081; putative Holliday junction resolvase; Holliday junction resolvase 3249906..3250322 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762085 YP_005234082.1 CDS STMMW_30591 NC_016854.1 3250369 3251055 R global regulatory protein complement(3250369..3251055) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762086 YP_005234083.1 CDS STMMW_30601 NC_016854.1 3251187 3252167 R pfam_scan;Pfam:PF00437; E()=7.0E-41;score=139.8;query 118-260;description=GSPII_E; Type II secretion, ATP-binding, protein complement(3251187..3252167) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762087 YP_005234084.1 CDS STMMW_30611 NC_016854.1 3252185 3252889 D pfam_scan;Pfam:PF01168; E()=2.3E-45;score=154.7;query 7-230;description=Ala_racemase_N; hypothetical protein 3252185..3252889 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762088 YP_005234085.1 CDS STMMW_30621 NC_016854.1 3252908 3253474 D pfam_scan;Pfam:PF02325; E()=8.5E-24;score=82.5;query8-80;description=YGGT; tmhmm; query 1-189; hypothetical protein 3252908..3253474 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762089 YP_005234086.1 CDS STMMW_30631 NC_016854.1 3253471 3253761 D pfam_scan;Pfam:PF02594; E()=1.3E-26;score=92.1;query8-81;description=DUF167; hypothetical protein 3253471..3253761 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762090 YP_005234087.1 CDS STMMW_30641 NC_016854.1 3253769 3254362 D pfam_scan;Pfam:PF01725; E()=4.2E-67;score=224.9;query 4-193;description=Ham1p_like; protein; HAM1 protein-like protein 3253769..3254362 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762091 YP_005234088.1 CDS STMMW_30651 NC_016854.1 3254355 3255491 D pfam_scan;Pfam:PF06969; E()=2.2E-18;score=66.0;query252-365;description=HemN_C; pfam_scan;Pfam:PF04055; E()=1.3E-23;score=83.3;query10- 179;description=Radical_SAM; oxygen-independent coproporphyrinogen III oxidase 3254355..3255491 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762092 YP_005234089.1 CDS STMMW_30661 NC_016854.1 3255582 3256589 R pfam_scan;Pfam:PF06717; E()=1.2E-170;score=566.1;query 13-320;description=DUF1202; hypothetical protein complement(3255582..3256589) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762093 YP_005234090.1 CDS STMMW_30671 NC_016854.1 3256722 3257768 R pfam_scan;Pfam:PF00710; E()=2.4E-105;score=351.7;query 25-342;description=Asparaginase; tmhmm; query 1-349; L-asparaginase complement(3256722..3257768) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762094 YP_005234091.1 CDS STMMW_30681 NC_016854.1 3257957 3258676 R pfam_scan;Pfam:PF11101; E()=2.7E-53;score=180.4;query 24-234;description=DUF2884; hypothetical protein complement(3257957..3258676) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762095 YP_005234092.1 CDS STMMW_30691 NC_016854.1 3258726 3259052 R pfam_scan;Pfam:PF04320; E()=3.7E-44;score=149.1;query 7-107;description=DUF469; hypothetical protein complement(3258726..3259052) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762096 YP_005234093.1 CDS STMMW_30701 NC_016854.1 3259052 3259771 R pfam_scan;Pfam:PF02390; E()=1.4E-70;score=236.3;query 49-237;description=Methyltransf_4; guanine-N7-methyltransferase; tRNA; tRNAm7G46-methyltransferase; guanine-N7--methyltransferase EC 2.1.1.33 complement(3259052..3259771) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762097 YP_005234094.1 CDS STMMW_30711 NC_016854.1 3259926 3260978 D pfam_scan;Pfam:PF00730; E()=7.3E-25;score=86.8;query36-167;description=HhH-GPD; pfam_scan;Pfam:PF00633; E()=8.0E-8;score=30.8;query 100-127;description=HHH; pfam_scan;Pfam:PF10576; E()=5.1E-4;score=19.3;query 192-208;description=EndIII_4Fe-2S; A/G-specific adenine glycosylase 3259926..3260978 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762098 YP_005234095.1 CDS STMMW_30721 NC_016854.1 3261006 3261281 D pfam_scan;Pfam:PF04362; E()=9.9E-40;score=133.1;query 1-88;description=Iron_traffic; hypothetical protein 3261006..3261281 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762099 YP_005234096.1 CDS STMMW_30731 NC_016854.1 3261394 3262479 D pfam_scan;Pfam:PF01464; E()=7.7E-30;score=102.4;query 198-321;description=SLT; membrane-bound lytic murein transglycosylase C 3261394..3262479 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762100 YP_005234097.1 CDS STMMW_30741 NC_016854.1 3262696 3263952 D pfam_scan;Pfam:PF03825; E()=1.2E-181;score=603.1;query 1-406;description=Nuc_H_symport; tmhmm; query 1-419; nucleoside permease nupg (nucleoside-transport system protein) 3262696..3263952 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762101 YP_005234098.1 CDS STMMW_30751 NC_016854.1 3264014 3266149 R pfam_scan;Pfam:PF03711; E()=5.9E-51;score=171.5;query 568-699;description=OKR_DC_1_C; pfam_scan;Pfam:PF01276; E()=4.3E-195;score=648.1;query 101-543;description=OKR_DC_1; pfam_scan;Pfam:PF03709; E()=1.0E-13;score=50.7;query4-79;description=OKR_DC_1_N; ornithine decarboxylase, constitutive complement(3264014..3266149) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762102 YP_005234099.1 CDS STMMW_30761 NC_016854.1 3266574 3267281 D pfam_scan;Pfam:PF04474; E()=4.7E-71;score=238.4;query 3-230;description=DUF554; tmhmm; query 1-236; hypothetical protein 3266574..3267281 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762103 YP_005234100.1 CDS STMMW_30771 NC_016854.1 3267621 3268055 R pfam_scan;Pfam:PF00903; E()=4.8E-14;score=52.3;query23-140;description=Glyoxalase; hypothetical protein complement(3267621..3268055) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762104 YP_005234101.1 CDS STMMW_30781 NC_016854.1 3268066 3269391 R pfam_scan;Pfam:PF02550; E()=1.7E-16;score=60.1;query7- 196;description=AcetylCoA_hydro; putative hydrolase complement(3268066..3269391) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762105 YP_005234102.1 CDS STMMW_30791 NC_016854.1 3269416 3269943 R pfam_scan;Pfam:PF01575; E()=4.5E-19;score=67.8;query29- 133;description=MaoC_dehydratas; hypothetical protein complement(3269416..3269943) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762106 YP_005234103.1 CDS STMMW_30801 NC_016854.1 3269967 3270809 R pfam_scan;Pfam:PF03328; E()=7.7E-33;score=113.3;query 10-222;description=HpcH_HpaI; citrate lyase complement(3269967..3270809) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762107 YP_005234104.1 CDS STMMW_30811 NC_016854.1 3271051 3271779 D pfam_scan;Pfam:PF03466; E()=1.5E-46;score=157.8;query 37-237;description=LysR_substrate; putative LysR family transcriptional regulator 3271051..3271779 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762108 YP_005234105.1 CDS STMMW_30821 NC_016854.1 3271827 3273566 R pfam_scan;Pfam:PF00884; E()=1.9E-59;score=200.6;query 26-509;description=Sulfatase; arylsulfatase complement(3271827..3273566) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762109 YP_005234106.1 CDS STMMW_30831 NC_016854.1 3273635 3274819 R arylsulfatase regulator complement(3273635..3274819) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762110 YP_005234107.1 CDS STMMW_30841 NC_016854.1 3275331 3276014 D pfam_scan;Pfam:PF00196; E()=4.1E-16;score=57.8;query161-214;description=GerE; LysR family transcriptional regulator 3275331..3276014 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762111 YP_005234108.1 CDS STMMW_30851 NC_016854.1 3276118 3276675 R pfam_scan;Pfam:PF11354; E()=1.3E-57;score=193.7;query 17-175;description=DUF3156; hypothetical protein complement(3276118..3276675) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762112 YP_005234109.1 CDS STMMW_30861 NC_016854.1 3276653 3278152 R pfam_scan;Pfam:PF00324; E()=1.9E-20;score=72.3;query37- 398;description=AA_permease; tmhmm; query 1-500; amino acid transport protein complement(3276653..3278152) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762113 YP_005234110.1 CDS STMMW_30871 NC_016854.1 3278361 3278735 R pfam_scan;Pfam:PF05899; E()=3.3E-22;score=77.2;query41-114;description=Cupin_3; hypothetical protein complement(3278361..3278735) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762114 YP_005234111.1 CDS STMMW_30881 NC_016854.1 3278750 3280051 R pfam_scan;Pfam:PF01266; E()=1.4E-67;score=228.2;query 31-385;description=DAO; putative oxidoreductase complement(3278750..3280051) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762115 YP_005234112.1 CDS STMMW_30891 NC_016854.1 3280213 3281697 D pfam_scan;Pfam:PF00171; E()=2.4E-160;score=533.3;query 31-490;description=Aldedh; aldehyde dehydrogenase 3280213..3281697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762116 YP_005234113.1 CDS STMMW_30901 NC_016854.1 3281833 3282213 R pfam_scan;Pfam:PF04965; E()=1.9E-10;score=40.3;query22-113;description=GPW_gp25; hypothetical protein complement(3281833..3282213) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762117 YP_005234114.1 CDS STMMW_30911 NC_016854.1 3282213 3282698 R pfam_scan;Pfam:PF05638; E()=2.9E-39;score=133.3;query 5-135;description=DUF796; hypothetical protein complement(3282213..3282698) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762118 YP_005234115.1 CDS STMMW_30921 NC_016854.1 3283424 3284347 R pfam_scan;Pfam:PF01522; E()=7.9E-23;score=80.0;query45- 151;description=Polysacc_deac_1; hypothetical protein complement(3283424..3284347) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762119 YP_005234116.1 CDS STMMW_30931 NC_016854.1 3284386 3285264 R pfam_scan;Pfam:PF00795; E()=1.5E-23;score=82.7;query33- 180;description=CN_hydrolase; hydrolase complement(3284386..3285264) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762120 YP_005234117.1 CDS STMMW_30941 NC_016854.1 3285660 3286964 R pfam_scan;Pfam:PF07690; E()=1.3E-44;score=152.6;query 15-319;description=MFS_1; tmhmm; query 1-435; hexuronate transporter complement(3285660..3286964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762121 YP_005234118.1 CDS STMMW_30951 NC_016854.1 3287369 3288553 D pfam_scan;Pfam:PF03786; E()=3.1E-156;score=519.1;query 1-388;description=UxuA; mannonate dehydratase; D-mannonate hydrolase 3287369..3288553 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762122 YP_005234119.1 CDS STMMW_30961 NC_016854.1 3288664 3290136 D pfam_scan;Pfam:PF01232; E()=2.4E-50;score=170.4;query 25-189;description=Mannitol_dh; pfam_scan;Pfam:PF08125; E()=1.3E-90;score=302.2;query 217-465;description=Mannitol_dh_C; D-mannonate oxidoreductase 3288664..3290136 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762123 YP_005234120.1 CDS STMMW_30971 NC_016854.1 3290148 3291560 D pfam_scan;Pfam:PF02614; E()=5.5E-226;score=749.9;query 1-469;description=UxaC; glucuronate isomerase; uronate isomerase; uronate isomerase (glucuronate isomerase); Uronic isomerase 3290148..3291560 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762124 YP_005234121.1 CDS STMMW_30981 NC_016854.1 3291860 3292918 R pfam_scan;Pfam:PF00015; E()=7.0E-26;score=90.9;query82-235;description=MCPsignal; hypothetical protein complement(3291860..3292918) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762125 YP_005234122.1 CDS STMMW_30991 NC_016854.1 3293588 3295444 R pfam_scan;Pfam:PF03738; E()=1.1E-99;score=332.8;query 224-615;description=GSP_synth; pfam_scan;Pfam:PF05257; E()=4.7E-21;score=74.1;query44-173;description=CHAP; tmhmm; query 1-619; glutathionylspermidine synthase complement(3293588..3295444) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762126 YP_005234123.1 CDS STMMW_31001 NC_016854.1 3295671 3296537 D pfam_scan;Pfam:PF00043; E()=1.7E-8;score=33.9;query 182-250;description=GST_C; pfam_scan;Pfam:PF02798; E()=1.5E-6;score=27.7;query 66-127;description=GST_N; transferase 3295671..3296537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762127 YP_005234124.1 CDS STMMW_31011 NC_016854.1 3296605 3297315 R hypothetical protein complement(3296605..3297315) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762128 YP_005234125.1 CDS STMMW_31021 NC_016854.1 3297315 3298367 R pfam_scan;Pfam:PF01497; E()=1.3E-53;score=181.1;query 44-298;description=Peripla_BP_2; ABC-transport protein, periplasmic-binding component complement(3297315..3298367) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762129 YP_005234126.1 CDS STMMW_31031 NC_016854.1 3298443 3298691 R pfam_scan;Pfam:PF01455; E()=1.6E-24;score=85.5;query1-73;description=HupF_HypC; hydrogenase-2 component protein complement(3298443..3298691) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762130 YP_005234127.1 CDS STMMW_31041 NC_016854.1 3298719 3299060 R pfam_scan;Pfam:PF01155; E()=1.3E-39;score=134.0;query 1-113;description=HypA; hydrogenase-2 component protein complement(3298719..3299060) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762131 YP_005234128.1 CDS STMMW_31051 NC_016854.1 3299053 3299541 R hydrogenase-2 component protein complement(3299053..3299541) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762132 YP_005234129.1 CDS STMMW_31061 NC_016854.1 3299534 3300028 R pfam_scan;Pfam:PF01750; E()=1.9E-36;score=124.1;query 20-147;description=HycI; hydrogenase-2 component protein complement(3299534..3300028) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762133 YP_005234130.1 CDS STMMW_31071 NC_016854.1 3300028 3301731 R pfam_scan;Pfam:PF00374; E()=2.6E-216;score=718.8;query 39-552;description=NiFeSe_Hases; hydrogenase-2 large subunit complement(3300028..3301731) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762134 YP_005234131.1 CDS STMMW_31081 NC_016854.1 3301728 3302906 R pfam_scan;Pfam:PF03916; E()=4.0E-18;score=65.3;query46-330;description=NrfD; tmhmm; query 1-393; hydrogenase-2 cytochrome b subunit complement(3301728..3302906) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762135 YP_005234132.1 CDS STMMW_31091 NC_016854.1 3302896 3303882 R pfam_scan;Pfam:PF00037; E()=4.0E-6;score=25.6;query 139-160;description=Fer4; hydrogenase-2 small subunit complement(3302896..3303882) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762136 YP_005234133.1 CDS STMMW_31101 NC_016854.1 3303885 3305003 R pfam_scan;Pfam:PF01058; E()=4.0E-30;score=103.7;query 59-205;description=Oxidored_q6; tmhmm; query 1-373; hydrogenase-2 small chain protein complement(3303885..3305003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762137 YP_005234134.1 CDS STMMW_31111 NC_016854.1 3305193 3305480 R pfam_scan;Pfam:PF11115; E()=3.6E-52;score=173.6;query 1-94;description=DUF2623; hypothetical protein complement(3305193..3305480) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762138 YP_005234135.1 CDS STMMW_31121 NC_016854.1 3305565 3307208 R pfam_scan;Pfam:PF00015; E()=5.4E-64;score=215.4;query 320-513;description=MCPsignal; tmhmm; query 1-548; methyl-accepting chemotaxis protein complement(3305565..3307208) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762139 YP_005234136.1 CDS STMMW_31131 NC_016854.1 3307515 3308009 R pfam_scan;Pfam:PF03350; E()=4.8E-40;score=135.8;query 8-126;description=UPF0114; tmhmm; query 1-165; hypothetical protein complement(3307515..3308009) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762140 YP_005234137.1 CDS STMMW_31141 NC_016854.1 3308289 3308804 R tmhmm; query 1-172; hypothetical protein complement(3308289..3308804) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762141 YP_005234138.1 CDS STMMW_31151 NC_016854.1 3308896 3309306 D hypothetical protein 3308896..3309306 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762142 YP_005234139.1 CDS STMMW_31161 NC_016854.1 3309293 3309697 D hypothetical protein 3309293..3309697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762143 YP_005234140.1 CDS STMMW_31171 NC_016854.1 3309821 3310705 D pfam_scan;Pfam:PF00106; E()=6.4E-20;score=71.4;query52-216;description=adh_short; oxidoreductase 3309821..3310705 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762144 YP_005234141.1 CDS STMMW_31181 NC_016854.1 3310818 3311243 R pfam_scan;Pfam:PF02472; E()=5.1E-33;score=113.8;query 12-133;description=ExbD; tmhmm; query 1-142; biopolymer transport ExbD protein complement(3310818..3311243) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762145 YP_005234142.1 CDS STMMW_31191 NC_016854.1 3311250 3311984 R pfam_scan;Pfam:PF01618; E()=7.7E-41;score=138.6;query 85-212;description=MotA_ExbB; tmhmm; query 1-245; biopolymer transport ExbB protein complement(3311250..3311984) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762146 YP_005234143.1 CDS STMMW_31201 NC_016854.1 3311977 3312126 R hypothetical protein complement(3311977..3312126) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762147 YP_005234144.1 CDS STMMW_31211 NC_016854.1 3312236 3313423 D pfam_scan;Pfam:PF01053; E()=1.5E-113;score=378.9;query 7-391;description=Cys_Met_Meta_PP; beta-cystathionase 3312236..3313423 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762148 YP_005234145.1 CDS STMMW_31221 NC_016854.1 3313563 3314222 D pfam_scan;Pfam:PF09335; E()=5.8E-20;score=71.2;query48- 173;description=SNARE_assoc; tmhmm; query 1-220; DedA family integral membrane protein 3313563..3314222 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762149 YP_005234146.1 CDS STMMW_31231 NC_016854.1 3314286 3315203 R pfam_scan;Pfam:PF06719; E()=1.3E-44;score=151.0;query 34-186;description=AraC_N; pfam_scan;Pfam:PF00165; E()=1.9E-7;score=30.5;query 209-247;description=HTH_AraC; AraC family transcriptional regulatory protein complement(3314286..3315203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762150 YP_005234147.1 CDS STMMW_31241 NC_016854.1 3315378 3316541 D pfam_scan;Pfam:PF00465; E()=6.0E-88;score=294.6;query 9-367;description=Fe-ADH; alcohol dehydrogenase 3315378..3316541 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762151 YP_005234148.1 CDS STMMW_31251 NC_016854.1 3316647 3317474 D pfam_scan;Pfam:PF00248; E()=3.3E-63;score=212.8;query 18-261;description=Aldo_ket_red; 2,5-diketo-D-gluconic acid reductase A 3316647..3317474 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762152 YP_005234149.1 CDS STMMW_31261 NC_016854.1 3317665 3319125 D pfam_scan;Pfam:PF00939; E()=1.1E-148;score=495.0;query 12-485;description=Na_sulph_symp; tmhmm; query 1-487; membrane transport protein 3317665..3319125 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762153 YP_005234150.1 CDS STMMW_31271 NC_016854.1 3319170 3319625 D pfam_scan;Pfam:PF01230; E()=1.1E-13;score=50.8;query11-77;description=HIT; hypothetical protein 3319170..3319625 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762154 YP_005234151.1 CDS STMMW_31281 NC_016854.1 3320180 3322351 R pfam_scan;Pfam:PF04055; E()=1.7E-10;score=40.6;query380- 585;description=Radical_SAM; pfam_scan;Pfam:PF08497; E()=1.0E-151;score=503.8;query 29-379;description=Radical_SAM_N; hypothetical protein complement(3320180..3322351) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762155 YP_005234152.1 CDS STMMW_31291 NC_016854.1 3322839 3323822 D pfam_scan;Pfam:PF03480; E()=2.0E-81;score=272.5;query 32-313;description=SBP_bac_7; tmhmm; query 1-328; putative membrane transport protein (periplasmic component) 3322839..3323822 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762156 YP_005234153.1 CDS STMMW_31301 NC_016854.1 3323864 3324346 D pfam_scan;Pfam:PF04290; E()=5.9E-28;score=97.1;query23-153;description=DctQ; tmhmm; query 1-161; membrane transport protein 3323864..3324346 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762157 YP_005234154.1 CDS STMMW_31311 NC_016854.1 3324357 3325664 D pfam_scan;Pfam:PF06808; E()=3.5E-126;score=421.0;query 13-424;description=DctM; tmhmm; query 1-436; putative membrane transport protein (inner membrane component); decarboxylate transporter 3324357..3325664 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762158 YP_005234155.1 CDS STMMW_31321 NC_016854.1 3325709 3327121 R pfam_scan;Pfam:PF07731; E()=5.9E-7;score=28.6;query 377-469;description=Cu-oxidase_2; pfam_scan;Pfam:PF07732; E()=4.4E-22;score=77.5;query52-166;description=Cu- oxidase_3; SufI protein complement(3325709..3327121) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762159 YP_005234156.1 CDS STMMW_31331 NC_016854.1 3327195 3327932 R pfam_scan;Pfam:PF01553; E()=8.0E-40;score=135.4;query 53-180;description=Acyltransferase; tmhmm; query 1-246; 1-acylglycerol-3-phosphate O-acyltransferase complement(3327195..3327932) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762160 YP_005234157.1 CDS STMMW_31341 NC_016854.1 3328189 3330447 R pfam_scan;Pfam:PF03989; E()=2.7E-5;score=23.6;query 640-675;description=DNA_gyraseA_C; pfam_scan;Pfam:PF00521; E()=5.8E-152;score=506.6;query 29-466;description=DNA_topoisoIV; topoisomerase IV subunit A complement(3328189..3330447) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762161 YP_005234158.1 CDS STMMW_31351 NC_016854.1 3330558 3331424 R pfam_scan;Pfam:PF06445; E()=1.6E-27;score=95.8;query134- 287;description=AraC_E_bind; pfam_scan;Pfam:PF00165; E()=2.1E-7;score=30.4;query 78-112;description=HTH_AraC; AraC family transcriptional regulator complement(3330558..3331424) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762162 YP_005234159.1 CDS STMMW_31361 NC_016854.1 3331496 3331888 R pfam_scan;Pfam:PF04076; E()=1.5E-55;score=185.9;query 2-127;description=BOF; hypothetical protein complement(3331496..3331888) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762163 YP_005234160.1 CDS STMMW_31371 NC_016854.1 3332040 3332699 D pfam_scan;Pfam:PF00486; E()=4.7E-23;score=80.0;query145- 216;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=2.2E-23;score=82.1;query3- 112;description=Response_reg; two-component system response regulator 3332040..3332699 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762164 YP_005234161.1 CDS STMMW_31381 NC_016854.1 3332696 3334045 D pfam_scan;Pfam:PF02518; E()=8.2E-24;score=83.1;query350-447;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.6E-12;score=46.7;query237-301;description=HisKA; tmhmm; query 1-450; two-component system sensor histidine kinase 3332696..3334045 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762165 YP_005234162.1 CDS STMMW_31391 NC_016854.1 3334152 3334733 D pfam_scan;Pfam:PF02525; E()=8.9E-32;score=109.9;query 3-187;description=Flavodoxin_2; putative oxidoreductase 3334152..3334733 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762166 YP_005234163.1 CDS STMMW_31401 NC_016854.1 3334765 3335079 D pfam_scan;Pfam:PF03992; E()=4.0E-16;score=58.4;query1-86;description=ABM; hypothetical protein 3334765..3335079 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762167 YP_005234164.1 CDS STMMW_31411 NC_016854.1 3335204 3337096 R pfam_scan;Pfam:PF00986; E()=2.3E-22;score=77.6;query554- 620;description=DNA_gyraseB_C; pfam_scan;Pfam:PF02518; E()=6.4E-13;score=48.0;query28-170;description=HATPase_c; pfam_scan;Pfam:PF00204; E()=1.2E-40;score=138.7;query 218-384;description=DNA_gyraseB; topoisomerase IV subunit B complement(3335204..3337096) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762168 YP_005234165.1 CDS STMMW_31421 NC_016854.1 3337124 3337705 R pfam_scan;Pfam:PF05728; E()=1.2E-75;score=253.1;query 3-188;description=UPF0227; hypothetical protein complement(3337124..3337705) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762169 YP_005234166.1 CDS STMMW_31431 NC_016854.1 3337705 3338532 R pfam_scan;Pfam:PF08413; E()=9.2E-19;score=65.6;query213- 249;description=Metallophos_C; pfam_scan;Pfam:PF00149; E()=2.4E-23;score=81.7;query16- 206;description=Metallophos; hypothetical protein complement(3337705..3338532) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762170 YP_005234167.1 CDS STMMW_31441 NC_016854.1 3338557 3338979 R pfam_scan;Pfam:PF06853; E()=4.2E-48;score=161.3;query 21-136;description=DUF1249; hypothetical protein complement(3338557..3338979) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762171 YP_005234168.1 CDS STMMW_31451 NC_016854.1 3338976 3339608 R pfam_scan;Pfam:PF00293; E()=5.5E-18;score=64.7;query58-190;description=NUDIX; hypothetical protein complement(3338976..3339608) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762172 YP_005234169.1 CDS STMMW_31461 NC_016854.1 3339809 3341284 D pfam_scan;Pfam:PF02321; E()=7.2E-28;score=97.2;query28-211;description=OEP; outer membrane protein TolC precursor 3339809..3341284 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762173 YP_005234170.1 CDS STMMW_31471 NC_016854.1 3341497 3342168 D pfam_scan;Pfam:PF06693; E()=9.8E-56;score=187.8;query 40-210;description=DUF1190; lipoprotein 3341497..3342168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762174 YP_005234171.1 CDS STMMW_31481 NC_016854.1 3342174 3343337 D pfam_scan;Pfam:PF03738; E()=3.5E-173;score=574.7;query 9-384;description=GSP_synth; hypothetical protein 3342174..3343337 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762175 YP_005234172.1 CDS STMMW_31491 NC_016854.1 3343399 3344229 R pfam_scan;Pfam:PF02900; E()=7.7E-72;score=241.1;query 21-276;description=LigB; hypothetical protein complement(3343399..3344229) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762176 YP_005234173.1 CDS STMMW_31501 NC_016854.1 3344328 3345101 D pfam_scan;Pfam:PF02535; E()=1.7E-35;score=122.0;query 7-246;description=Zip; tmhmm; query 1-258; hypothetical protein 3344328..3345101 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762177 YP_005234174.1 CDS STMMW_31511 NC_016854.1 3345168 3345344 R tmhmm; query 1-59; hypothetical protein complement(3345168..3345344) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762178 YP_005234175.1 CDS STMMW_31521 NC_016854.1 3345744 3347540 D pfam_scan;Pfam:PF05935; E()=3.9E-175;score=582.7;query 42-587;description=Arylsulfotrans; tmhmm; query 1-599; arylsulfate sulfotransferase 3345744..3347540 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762179 YP_005234176.1 CDS STMMW_31541 NC_016854.1 3347560 3348231 D pfam_scan;Pfam:PF01323; E()=5.0E-12;score=45.3;query48-201;description=DSBA; disulfide isomerase 3347560..3348231 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762180 YP_005234177.1 CDS STMMW_31551 NC_016854.1 3348246 3348923 D pfam_scan;Pfam:PF02600; E()=8.5E-20;score=70.6;query24-156;description=DsbB; tmhmm; query 1-226; disulfide isomerase 3348246..3348923 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762181 YP_005234178.1 CDS STMMW_31561 NC_016854.1 3349094 3349747 R pfam_scan;Pfam:PF00926; E()=5.2E-82;score=273.5;query 17-209;description=DHBP_synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(3349094..3349747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762182 YP_005234179.1 CDS STMMW_31571 NC_016854.1 3350124 3350483 D pfam_scan;Pfam:PF04380; E()=7.1E-27;score=92.6;query28-98;description=DUF526; hypothetical protein 3350124..3350483 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762183 YP_005234180.1 CDS STMMW_31581 NC_016854.1 3350557 3350766 R pfam_scan;Pfam:PF08971; E()=1.7E-37;score=126.4;query 5-69;description=GlgS; glycogen synthesis protein GlgS complement(3350557..3350766) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762184 YP_005234181.1 CDS STMMW_31591 NC_016854.1 3351024 3351644 D pfam_scan;Pfam:PF07290; E()=2.7E-110;score=366.3;query 4-205;description=DUF1449; tmhmm; query 1-207; hypothetical protein 3351024..3351644 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762185 YP_005234182.1 CDS STMMW_31601 NC_016854.1 3351663 3353342 D tmhmm; query 1-560; hypothetical protein 3351663..3353342 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762186 YP_005234183.1 CDS STMMW_31611 NC_016854.1 3353803 3355236 R pfam_scan;Pfam:PF01467; E()=1.7E-15;score=57.0;query344- 469;description=CTP_transf_2; pfam_scan;Pfam:PF00294; E()=6.7E-53;score=179.5;query 12-305;description=PfkB; ADP-heptose synthase complement(3353803..3355236) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762187 YP_005234184.1 CDS STMMW_31621 NC_016854.1 3355284 3358127 R pfam_scan;Pfam:PF08335; E()=1.7E-33;score=114.8;query 297-436;description=GlnD_UR_UTase; pfam_scan;Pfam:PF03710; E()=1.9E-89;score=299.3;query 31-273;description=GlnE; adenyl-transferase complement(3355284..3358127) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762188 YP_005234185.1 CDS STMMW_31631 NC_016854.1 3358245 3359546 R pfam_scan;Pfam:PF01928; E()=8.2E-43;score=146.0;query 3-200;description=CYTH; hypothetical protein complement(3358245..3359546) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762189 YP_005234186.1 CDS STMMW_31641 NC_016854.1 3359788 3360402 D pfam_scan;Pfam:PF08239; E()=1.3E-5;score=25.1;query 36-78;description=SH3_3; tmhmm; query 1-205; hypothetical protein 3359788..3360402 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762190 YP_005234187.1 CDS STMMW_31651 NC_016854.1 3360465 3361706 D pfam_scan;Pfam:PF01743; E()=2.0E-24;score=85.8;query3-122;description=PolyA_pol; pfam_scan;Pfam:PF01966; E()=4.2E-14;score=52.0;query230-328;description=HD; tRNA nucleotidyltransferase 3360465..3361706 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762191 YP_005234188.1 CDS STMMW_31661 NC_016854.1 3361811 3362635 R pfam_scan;Pfam:PF02673; E()=9.7E-94;score=313.0;query 11-268;description=BacA; tmhmm; query 1-275; bacitracin resistance protein (putative undecaprenol kinase) complement(3361811..3362635) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762192 YP_005234189.1 CDS STMMW_31671 NC_016854.1 3362730 3363092 R pfam_scan;Pfam:PF02152; E()=6.7E-35;score=118.7;query 5-115;description=FolB; dihydroneopterin aldolase complement(3362730..3363092) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762193 YP_005234190.1 CDS STMMW_31681 NC_016854.1 3363196 3363807 D pfam_scan;Pfam:PF02660; E()=2.3E-61;score=205.9;query 10-186;description=DUF205; tmhmm; query 1-204; hypothetical protein 3363196..3363807 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762194 YP_005234191.1 CDS STMMW_31691 NC_016854.1 3364058 3365071 R pfam_scan;Pfam:PF00814; E()=2.3E-108;score=361.3;query 24-307;description=Peptidase_M22; glycoprotease complement(3364058..3365071) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762195 YP_005234192.1 CDS STMMW_31701 NC_016854.1 3365299 3365514 D pfam_scan;Pfam:PF01165; E()=1.4E-24;score=85.2;query3- 58;description=Ribosomal_S21; 30S ribosomal protein S21 3365299..3365514 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762196 YP_005234193.1 CDS STMMW_31711 NC_016854.1 3365750 3367495 D pfam_scan;Pfam:PF10410; E()=1.7E-12;score=46.2;query368-425;description=DnaB_bind; pfam_scan;Pfam:PF08275; E()=4.7E-46;score=155.8;query 126-252;description=Toprim_N; pfam_scan;Pfam:PF01751; E()=8.1E-18;score=63.8;query260-341;description=Toprim; pfam_scan;Pfam:PF01807; E()=8.4E-41;score=137.1;query 6-100;description=zf-CHC2; pfam_scan;Pfam:PF08278; E()=1.9E-40;score=137.3;query 450-575;description=DnaG_DnaB_bind; DNA primase 3365750..3367495 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762197 YP_005234194.1 CDS STMMW_31721 NC_016854.1 3367510 3369492 D pfam_scan;Pfam:PF04545; E()=1.5E-18;score=65.9;query594- 647;description=Sigma70_r4; pfam_scan;Pfam:PF00140; E()=1.1E-13;score=49.4;query142- 174;description=Sigma70_r1_2; pfam_scan;Pfam:PF03979; E()=2.1E-29;score=101.0;query 46-127;description=Sigma70_r1_1; pfam_scan;Pfam:PF04546; E()=1.7E-86;score=288.7;query 184-395;description=Sigma70_ner; pfam_scan;Pfam:PF04539; E()=3.8E-31;score=106.5;query 500-581;description=Sigma70_r3; pfam_scan;Pfam:PF04542; E()=5.6E-23;score=80.1;query426- 496;description=Sigma70_r2; RNA polymerase sigma-70 factor 3367510..3369492 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762198 YP_005234195.1 CDS STMMW_31731 NC_016854.1 3369616 3370122 R pfam_scan;Pfam:PF03167; E()=2.0E-25;score=88.8;query6-159;description=UDG; G/U mismatch-specific DNA glycosylase complement(3369616..3370122) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762199 YP_005234196.1 CDS STMMW_31741 NC_016854.1 3370482 3370700 R pfam_scan;Pfam:PF04606; E()=2.7E-20;score=70.9;query3-49;description=Ogr_Delta; phage late control gene complement(3370482..3370700) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762200 YP_005234197.1 CDS STMMW_31751 NC_016854.1 3370767 3371885 R pfam_scan;Pfam:PF05954; E()=1.4E-127;score=424.9;query 2-359;description=Phage_GPD; phage late control gene complement(3370767..3371885) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762201 YP_005234198.1 CDS STMMW_31761 NC_016854.1 3371933 3372418 R pfam_scan;Pfam:PF06995; E()=2.6E-49;score=165.7;query 6-125;description=Phage_P2_GpU; phage tail protein complement(3371933..3372418) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762202 YP_005234199.1 CDS STMMW_31771 NC_016854.1 3372433 3374874 R none; pfam_scan;Pfam:PF10145; E()=7.3E-48;score=162.7;query 238-440;description=PhageMin_Tail; tmhmm; query 1-814; phage tail tape measure protein complement(3372433..3374874) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762203 YP_005234200.1 CDS STMMW_31781 NC_016854.1 3374867 3374986 R pfam_scan;Pfam:PF06528; E()=6.9E-22;score=75.9;query1-39;description=Phage_P2_GpE; phage tail protein complement(3374867..3374986) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762204 YP_005234201.1 CDS STMMW_31791 NC_016854.1 3375019 3375354 R pfam_scan;Pfam:PF06158; E()=8.6E-33;score=111.4;query 25-109;description=Phage_E; phage tail protein complement(3375019..3375354) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762205 YP_005234202.1 CDS STMMW_31801 NC_016854.1 3375417 3375935 R pfam_scan;Pfam:PF04985; E()=1.6E-73;score=245.6;query 2-172;description=Phage_tube; major tail sheath protein complement(3375417..3375935) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762206 YP_005234203.1 CDS STMMW_31811 NC_016854.1 3375951 3377138 R none; pfam_scan;Pfam:PF04984; E()=1.4E-15;score=56.8;query2- 97;description=Phage_sheath_1; bacteriophage major tail sheath protein complement(3375951..3377138) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762207 YP_005234204.1 CDS STMMW_31821 NC_016854.1 3377307 3377897 R pfam_scan;Pfam:PF02413; E()=6.6E-31;score=107.0;query 43-195;description=Caudo_TAP; phage tail-fiber asembly protein complement(3377307..3377897) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762208 YP_005234205.1 CDS STMMW_31841 NC_016854.1 3377897 3379990 R none; pfam_scan;Pfam:PF03406; E()=1.9E-20;score=71.8;query170- 212;description=Phage_fiber_2; phage variable tail-fiber protein complement(3377897..3379990) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762209 YP_005234206.1 CDS STMMW_31851 NC_016854.1 3380001 3380531 R pfam_scan;Pfam:PF09684; E()=1.6E-59;score=199.2;query 7-143;description=Tail_P2_I; p2 i; phage tail protein; orf38 complement(3380001..3380531) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762210 YP_005234207.1 CDS STMMW_31861 NC_016854.1 3380524 3381432 R pfam_scan;Pfam:PF04865; E()=8.4E-56;score=188.7;query 116-262;description=Baseplate_J; baseplate assembly protein complement(3380524..3381432) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762211 YP_005234208.1 CDS STMMW_31881 NC_016854.1 3381439 3381786 R pfam_scan;Pfam:PF04965; E()=5.5E-23;score=80.5;query17-104;description=GPW_gp25; baseplate assembly protein complement(3381439..3381786) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762212 YP_005234209.1 CDS STMMW_31891 NC_016854.1 3381783 3382424 R none; pfam_scan;Pfam:PF04717; E()=1.8E-30;score=104.1;query 21-96;description=Phage_base_V; phage tail protein complement(3381783..3382424) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762213 YP_005234210.1 CDS STMMW_31901 NC_016854.1 3382493 3382942 R pfam_scan;Pfam:PF05069; E()=2.9E-55;score=185.6;query 3-147;description=Phage_tail_S; tail completion protein complement(3382493..3382942) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762214 YP_005234211.1 CDS STMMW_31911 NC_016854.1 3382935 3383411 R pfam_scan;Pfam:PF06891; E()=4.4E-44;score=149.2;query 4-134;description=P2_Phage_GpR; putative phage tail completion protein complement(3382935..3383411) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762215 YP_005234212.1 CDS STMMW_31921 NC_016854.1 3383510 3383923 R lysozyme complement(3383510..3383923) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762216 YP_005234213.1 CDS STMMW_31931 NC_016854.1 3383920 3384417 R none; pfam_scan;Pfam:PF00959; E()=1.9E-15;score=56.3;query43- 152;description=Phage_lysozyme; lysozyme complement(3383920..3384417) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762217 YP_005234214.1 CDS STMMW_31941 NC_016854.1 3384907 3385413 R pfam_scan;Pfam:PF05926; E()=5.4E-54;score=181.4;query 29-167;description=Phage_GPL; putative capsid completion protein complement(3384907..3385413) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762218 YP_005234215.1 CDS STMMW_31951 NC_016854.1 3385507 3386256 R none; pfam_scan;Pfam:PF05944; E()=8.9E-45;score=151.3;query 34-163;description=Phage_term_smal; terminase, endonuclease subunit complement(3385507..3386256) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762219 YP_005234216.1 CDS STMMW_31971 NC_016854.1 3386260 3387327 R none; pfam_scan;Pfam:PF05125; E()=1.8E-174;score=578.7;query 6-342;description=Phage_cap_P2; putative major capsid protein complement(3386260..3387327) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762220 YP_005234217.1 CDS STMMW_31981 NC_016854.1 3387404 3388258 R none; pfam_scan;Pfam:PF05929; E()=1.3E-127;score=424.4;query 6-284;description=Phage_GPO; putative capsid scaffolding protein complement(3387404..3388258) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762221 YP_005234218.1 CDS STMMW_31991 NC_016854.1 3388424 3390193 D pfam_scan;Pfam:PF03237; E()=1.2E-121;score=405.8;query 164-572;description=Terminase_6; pfam_scan;Pfam:PF06056; E()=5.7E-25;score=85.8;query12-69;description=Terminase_5; terminase, ATPase subunit 3388424..3390193 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762222 YP_005234219.1 CDS STMMW_32001 NC_016854.1 3390193 3391239 D pfam_scan;Pfam:PF04860; E()=1.6E-50;score=171.4;query 53-333;description=Phage_portal; capsid portal protein 3390193..3391239 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762223 YP_005234220.1 CDS STMMW_32011 NC_016854.1 3391672 3392610 D phage protein 3391672..3392610 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762224 YP_005234221.1 CDS STMMW_32031 NC_016854.1 3393073 3393804 R none; tmhmm; query 1-244; phage protein complement(3393073..3393804) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762225 YP_005234222.1 CDS STMMW_32041 NC_016854.1 3393884 3394366 R pfam_scan;Pfam:PF06183; E()=1.7E-23;score=81.8;query99-160;description=DinI; bacteriophage sos operon Tum protein complement(3393884..3394366) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762226 YP_005234223.1 CDS STMMW_32051 NC_016854.1 3394441 3396684 R none; pfam_scan;Pfam:PF05840; E()=7.0E-92;score=305.9;query 317-503;description=Phage_GPA; bacteriophage replication protein complement(3394441..3396684) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762227 YP_005234224.1 CDS STMMW_32061 NC_016854.1 3396675 3396956 R pfam_scan;Pfam:PF04266; E()=9.5E-5;score=22.1;query 7-43;description=ASCH; phage protein complement(3396675..3396956) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762228 YP_005234225.1 CDS STMMW_32071 NC_016854.1 3396953 3397225 R phage protein complement(3396953..3397225) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762229 YP_005234226.1 CDS STMMW_32081 NC_016854.1 3397222 3397791 R pfam_scan;Pfam:PF00929; E()=2.3E-25;score=89.0;query15-179;description=Exonuc_X-T; exonuclease complement(3397222..3397791) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762230 YP_005234227.1 CDS STMMW_32082 NC_016854.1 3397803 3398030 R pfam_scan;Pfam:PF01258; E()=9.4E-14;score=49.9;query34-66;description=zf- dskA_traR; phage protein complement(3397803..3398030) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762231 YP_005234228.1 CDS STMMW_32091 NC_016854.1 3398030 3398263 R pfam_scan;Pfam:PF10809; E()=3.3E-32;score=109.6;query 1-77;description=DUF2732; phage protein complement(3398030..3398263) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762232 YP_005234229.1 CDS STMMW_32101 NC_016854.1 3398328 3398666 R phage protein complement(3398328..3398666) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762233 YP_005234230.1 CDS STMMW_32111 NC_016854.1 3398838 3399347 R pfam_scan;Pfam:PF06892; E()=6.7E-66;score=220.7;query 3-160;description=Phage_CP76; phage regulatory protein complement(3398838..3399347) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762234 YP_005234231.1 CDS STMMW_32112 NC_016854.1 3399378 3399641 R phage regulatory protein complement(3399378..3399641) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762235 YP_005234232.1 CDS STMMW_32121 NC_016854.1 3399764 3400345 D pfam_scan;Pfam:PF07022; E()=4.4E-22;score=76.9;query14- 76;description=Phage_CI_repr; repressor protein 3399764..3400345 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762236 YP_005234233.1 CDS STMMW_32131 NC_016854.1 3400345 3401367 D pfam_scan;Pfam:PF00589; E()=8.2E-37;score=126.4;query 181-323;description=Phage_integrase; bacteriophage integrase 3400345..3401367 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762237 YP_005234234.1 CDS STMMW_32151 NC_016854.1 3401584 3402351 R pfam_scan;Pfam:PF08021; E()=1.3E-32;score=111.7;query 23-133;description=FAD_binding_9; pfam_scan;Pfam:PF04954; E()=1.2E-21;score=76.9;query143-254;description=SIP; hypothetical protein complement(3401584..3402351) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762238 YP_005234235.1 CDS STMMW_32161 NC_016854.1 3402583 3403230 D pfam_scan;Pfam:PF03551; E()=5.7E-16;score=57.7;query68-145;description=PadR; hypothetical protein 3402583..3403230 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762239 YP_005234236.1 CDS STMMW_32171 NC_016854.1 3403227 3404792 R pfam_scan;Pfam:PF00672; E()=6.6E-13;score=47.9;query192-260;description=HAMP; pfam_scan;Pfam:PF00015; E()=2.5E-54;score=183.8;query 318-513;description=MCPsignal; tmhmm; query 1-522; methyl-accepting chemotaxis protein II complement(3403227..3404792) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762240 YP_005234237.1 CDS STMMW_32181 NC_016854.1 3405180 3406700 R pfam_scan;Pfam:PF08447; E()=3.6E-11;score=42.4;query31-112;description=PAS_3; pfam_scan;Pfam:PF00015; E()=4.0E-52;score=176.6;query 315-503;description=MCPsignal; aerotaxis receptor protein complement(3405180..3406700) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762241 YP_005234238.1 CDS STMMW_32191 NC_016854.1 3407220 3408509 D pfam_scan;Pfam:PF00202; E()=1.1E-103;score=346.3;query 44-366;description=Aminotran_3; aminotransferase 3407220..3408509 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762242 YP_005234239.1 CDS STMMW_32201 NC_016854.1 3408680 3410698 D pfam_scan;Pfam:PF00724; E()=6.3E-98;score=327.5;query 5-331;description=Oxidored_FMN; pfam_scan;Pfam:PF07992; E()=1.0E-7;score=31.3;query 448-537;description=Pyr_redox_2; pfam_scan;Pfam:PF03486; E()=9.6E-7;score=27.5;query 376-416;description=HI0933_like; 2,4-dienoyl-CoA reductase [NADPH] 3408680..3410698 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762243 YP_005234240.1 CDS STMMW_32211 NC_016854.1 3410779 3411915 R pfam_scan;Pfam:PF05175; E()=2.6E-55;score=186.0;query 199-370;description=MTS; hypothetical protein complement(3410779..3411915) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762244 YP_005234241.1 CDS STMMW_32221 NC_016854.1 3412001 3412498 D pfam_scan;Pfam:PF01863; E()=1.4E-11;score=44.3;query93-149;description=DUF45; hypothetical protein 3412001..3412498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762245 YP_005234242.1 CDS STMMW_32231 NC_016854.1 3412650 3413342 D pfam_scan;Pfam:PF02698; E()=5.3E-27;score=93.9;query62-186;description=DUF218; tmhmm; query 1-231; hypothetical protein 3412650..3413342 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762246 YP_005234243.1 CDS STMMW_32241 NC_016854.1 3413431 3414429 D pfam_scan;Pfam:PF01408; E()=1.3E-31;score=108.8;query 2-120;description=GFO_IDH_MocA; oxidoreductase 3413431..3414429 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762247 YP_005234244.1 CDS STMMW_32251 NC_016854.1 3414701 3415669 D pfam_scan;Pfam:PF03741; E()=1.6E-60;score=203.4;query 80-282;description=TerC; tmhmm; query 1-323; drug efflux protein 3414701..3415669 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762248 YP_005234245.1 CDS STMMW_32261 NC_016854.1 3415924 3417168 D pfam_scan;Pfam:PF00375; E()=6.0E-65;score=219.2;query 18-397;description=SDF; tmhmm; query 1-415; membrane transport protein 3415924..3417168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762249 YP_005234246.1 CDS STMMW_32271 NC_016854.1 3417618 3418280 D pfam_scan;Pfam:PF09335; E()=1.5E-22;score=79.6;query48- 174;description=SNARE_assoc; tmhmm; query 1-221; hypothetical protein 3417618..3418280 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762250 YP_005234247.1 CDS STMMW_32281 NC_016854.1 3418284 3418667 D tmhmm; query 1-128; hypothetical protein 3418284..3418667 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762251 YP_005234248.1 CDS STMMW_32291 NC_016854.1 3418812 3419180 D pfam_scan;Pfam:PF06476; E()=3.9E-39;score=133.1;query 7-116;description=DUF1090; hypothetical protein 3418812..3419180 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762252 YP_005234249.1 CDS STMMW_32301 NC_016854.1 3419530 3419928 D pfam_scan;Pfam:PF07332; E()=5.7E-23;score=80.5;query19-129;description=DUF1469; tmhmm; query 1-133; hypothetical protein 3419530..3419928 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762253 YP_005234250.1 CDS STMMW_32311 NC_016854.1 3419925 3420224 D hypothetical protein 3419925..3420224 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762254 YP_005234251.1 CDS STMMW_32321 NC_016854.1 3420369 3420854 D pfam_scan;Pfam:PF07681; E()=4.3E-21;score=74.3;query39-118;description=DoxX; tmhmm; query 1-162; hypothetical protein 3420369..3420854 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762255 YP_005234252.1 CDS STMMW_32331 NC_016854.1 3420922 3421908 D pfam_scan;Pfam:PF00043; E()=1.4E-6;score=27.7;query 198-274;description=GST_C; hypothetical protein 3420922..3421908 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762256 YP_005234253.1 CDS STMMW_32341 NC_016854.1 3422032 3422397 D pfam_scan;Pfam:PF05656; E()=1.7E-41;score=140.1;query 10-118;description=DUF805; tmhmm; query 1-122; hypothetical protein 3422032..3422397 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762257 YP_005234254.1 CDS STMMW_32351 NC_016854.1 3422436 3423332 R pfam_scan;Pfam:PF00126; E()=1.4E-14;score=53.3;query9-68;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.3E-19;score=69.8;query96- 290;description=LysR_substrate; LysR family transcriptional regulator complement(3422436..3423332) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762258 YP_005234255.1 CDS STMMW_32361 NC_016854.1 3423437 3424138 D pfam_scan;Pfam:PF02678; E()=5.6E-19;score=67.6;query5-119;description=Pirin; hypothetical protein 3423437..3424138 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762259 YP_005234256.1 CDS STMMW_32371 NC_016854.1 3424162 3424326 D hypothetical protein 3424162..3424326 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762260 YP_005234257.1 CDS STMMW_32381 NC_016854.1 3424439 3425749 R pfam_scan;Pfam:PF03313; E()=4.2E-56;score=189.8;query 52-429;description=SDH_alpha; hypothetical protein complement(3424439..3425749) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762261 YP_005234258.1 CDS STMMW_32391 NC_016854.1 3425775 3427106 R tmhmm; query 1-444; putative membrane transport protein complement(3425775..3427106) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762262 YP_005234259.1 CDS STMMW_32401 NC_016854.1 3427422 3428786 R pfam_scan;Pfam:PF03313; E()=3.8E-109;score=363.8;query 183-449;description=SDH_alpha; pfam_scan;Pfam:PF03315; E()=2.2E-56;score=189.9;query 3-158;description=SDH_beta; L-serine dehydratase complement(3427422..3428786) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762263 YP_005234260.1 CDS STMMW_32411 NC_016854.1 3428856 3431150 R pfam_scan;Pfam:PF02901; E()=2.8E-231;score=768.8;query 24-618;description=PFL; pfam_scan;Pfam:PF01228; E()=2.1E-40;score=136.6;query 634-745;description=Gly_radical; formate acetyltransferase complement(3428856..3431150) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762264 YP_005234261.1 CDS STMMW_32421 NC_016854.1 3431184 3432392 R pfam_scan;Pfam:PF00871; E()=4.3E-156;score=519.1;query 7-386;description=Acetate_kinase; propionate kinase complement(3431184..3432392) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762265 YP_005234262.1 CDS STMMW_32431 NC_016854.1 3432458 3433789 R pfam_scan;Pfam:PF03222; E()=1.9E-8;score=33.0;query 29-439;description=Trp_Tyr_perm; tmhmm; query 1-444; threonine/serine transporter complement(3432458..3433789) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762266 YP_005234263.1 CDS STMMW_32441 NC_016854.1 3433810 3434799 R pfam_scan;Pfam:PF00291; E()=7.5E-69;score=232.3;query 26-312;description=PALP; catabolic threonine dehydratase complement(3433810..3434799) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762267 YP_005234264.1 CDS STMMW_32451 NC_016854.1 3434897 3435835 R pfam_scan;Pfam:PF00126; E()=1.4E-17;score=62.9;query10-68;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.9E-34;score=116.4;query 99-297;description=LysR_substrate; TDC operon transcriptional activator complement(3434897..3435835) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762268 YP_005234265.1 CDS STMMW_32461 NC_016854.1 3437229 3437615 D hypothetical protein 3437229..3437615 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762269 YP_005234266.1 CDS STMMW_32471 NC_016854.1 3437634 3438779 R pfam_scan;Pfam:PF02595; E()=1.9E-180;score=599.0;query 1-377;description=Gly_kinase; hypothetical protein complement(3437634..3438779) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762270 YP_005234267.1 CDS STMMW_32481 NC_016854.1 3438877 3439767 R pfam_scan;Pfam:PF03446; E()=2.2E-56;score=189.6;query 3-163;description=NAD_binding_2; 2-hydroxy-3-oxopropionate reductase complement(3438877..3439767) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762271 YP_005234268.1 CDS STMMW_32491 NC_016854.1 3439793 3440509 R pfam_scan;Pfam:PF03328; E()=1.1E-62;score=210.9;query 2-225;description=HpcH_HpaI; 5-keto-4-deoxy-D-glucarate aldolase complement(3439793..3440509) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762272 YP_005234269.1 CDS STMMW_32501 NC_016854.1 3441093 3442664 D pfam_scan;Pfam:PF08666; E()=3.3E-8;score=32.9;query 23-91;description=SAF; pfam_scan;Pfam:PF04295; E()=5.4E-145;score=482.6;query 118-522;description=GD_AH_C; D-galactarate dehydratase 3441093..3442664 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762273 YP_005234270.1 CDS STMMW_32511 NC_016854.1 3442904 3443851 R pfam_scan;Pfam:PF00294; E()=2.5E-54;score=184.2;query 5-300;description=PfkB; putative sugar kinase complement(3442904..3443851) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762274 YP_005234271.1 CDS STMMW_32521 NC_016854.1 3443862 3444695 R pfam_scan;Pfam:PF00455; E()=2.2E-11;score=43.3;query90-239;description=DeoR; pfam_scan;Pfam:PF08220; E()=5.0E-15;score=54.2;query11-64;description=HTH_DeoR; putative transcriptional repressor complement(3443862..3444695) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762275 YP_005234272.1 CDS STMMW_32531 NC_016854.1 3445029 3445883 D pfam_scan;Pfam:PF01116; E()=1.6E-115;score=384.5;query 4-283;description=F_bP_aldolase; tagatose-bisphosphate aldolase 3445029..3445883 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762276 YP_005234273.1 CDS STMMW_32541 NC_016854.1 3445894 3446808 D pfam_scan;Pfam:PF00294; E()=7.4E-42;score=143.3;query 11-286;description=PfkB; putative fructose-1-phosphate kinase 3445894..3446808 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762277 YP_005234274.1 CDS STMMW_32551 NC_016854.1 3446835 3448262 D pfam_scan;Pfam:PF02378; E()=1.0E-15;score=57.3;query131-397;description=PTS_EIIC; pfam_scan;Pfam:PF02302; E()=1.2E-15;score=57.6;query6-96;description=PTS_IIB; tmhmm; query 1-476; PTS system fructose-specific EIIbc component 3446835..3448262 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762278 YP_005234275.1 CDS STMMW_32561 NC_016854.1 3448249 3449055 D pfam_scan;Pfam:PF00359; E()=1.6E-30;score=105.3;query 5-139;description=PTS_EIIA_2; pfam_scan;Pfam:PF00381; E()=1.5E-24;score=85.4;query156-239;description=PTS-HPr; PTS-transport family phosphoryl transfer protein 3448249..3449055 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762279 YP_005234276.1 CDS STMMW_32571 NC_016854.1 3449253 3450524 D pfam_scan;Pfam:PF08013; E()=3.6E-198;score=657.8;query 2-419;description=Tagatose_6_P_K; putative sugar kinase 3449253..3450524 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762280 YP_005234277.1 CDS STMMW_32581 NC_016854.1 3450539 3451003 D pfam_scan;Pfam:PF00359; E()=4.0E-27;score=94.3;query8-136;description=PTS_EIIA_2; PTS system galactitol-specific transporter subunit IIA 3450539..3451003 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762281 YP_005234278.1 CDS STMMW_32591 NC_016854.1 3451034 3451318 D pfam_scan;Pfam:PF02302; E()=9.9E-11;score=41.9;query4-84;description=PTS_IIB; PTS system galactitol-specific transporter subunit IIB 3451034..3451318 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762282 YP_005234279.1 CDS STMMW_32601 NC_016854.1 3451322 3452695 D pfam_scan;Pfam:PF03611; E()=1.7E-91;score=306.6;query 7-398;description=EIIC-GAT; tmhmm; query 1-458; PTS system galactitol-specific transporter subunit IIC 3451322..3452695 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762283 YP_005234280.1 CDS STMMW_32611 NC_016854.1 3452739 3453782 D pfam_scan;Pfam:PF08240; E()=1.7E-29;score=101.3;query 26-130;description=ADH_N; pfam_scan;Pfam:PF00107; E()=3.1E-30;score=104.7;query 161-307;description=ADH_zinc_N; galactitol-1-phosphate dehydrogenase 3452739..3453782 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762284 YP_005234281.1 CDS STMMW_32621 NC_016854.1 3453893 3454666 D pfam_scan;Pfam:PF00455; E()=1.6E-44;score=150.9;query 83-236;description=DeoR; pfam_scan;Pfam:PF08220; E()=5.1E-16;score=57.4;query6-57;description=HTH_DeoR; galactitol utilization operon repressor 3453893..3454666 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762285 YP_005234282.1 CDS STMMW_32631 NC_016854.1 3454824 3455687 R pfam_scan;Pfam:PF00590; E()=4.6E-28;score=97.8;query14- 213;description=TP_methylase; hypothetical protein complement(3454824..3455687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762286 YP_005234283.1 CDS STMMW_32641 NC_016854.1 3455751 3457793 D pfam_scan;Pfam:PF04348; E()=1.2E-45;score=155.4;query 41-287;description=LppC; hypothetical protein 3455751..3457793 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762287 YP_005234284.1 CDS STMMW_32651 NC_016854.1 3457751 3458146 D pfam_scan;Pfam:PF02021; E()=8.5E-36;score=121.3;query 22-115;description=UPF0102; hypothetical protein 3457751..3458146 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762288 YP_005234285.1 CDS STMMW_32661 NC_016854.1 3458168 3458758 D pfam_scan;Pfam:PF01380; E()=1.1E-5;score=25.0;query 105-152;description=SIS; phosphoheptose isomerase 3458168..3458758 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762289 YP_005234286.1 CDS STMMW_32671 NC_016854.1 3458768 3459343 D pfam_scan;Pfam:PF04972; E()=8.9E-14;score=50.7;query53-113;description=BON; tmhmm; query 1-192; lipoprotein 3458768..3459343 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762290 YP_005234287.1 CDS STMMW_32681 NC_016854.1 3459410 3460078 R pfam_scan;Pfam:PF01118; E()=7.8E-7;score=29.2;query 14-86;description=Semialdhyde_dh; hypothetical protein complement(3459410..3460078) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762291 YP_005234288.1 CDS STMMW_32691 NC_016854.1 3460176 3460694 D pfam_scan;Pfam:PF01965; E()=4.0E-47;score=159.0;query 31-170;description=DJ-1_PfpI; hypothetical protein 3460176..3460694 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762292 YP_005234289.1 CDS STMMW_32701 NC_016854.1 3460674 3461117 R hypothetical protein complement(3460674..3461117) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762293 YP_005234290.1 CDS STMMW_32711 NC_016854.1 3461155 3461472 D pfam_scan;Pfam:PF01541; E()=3.9E-13;score=49.4;query9-79;description=GIY-YIG; hypothetical protein 3461155..3461472 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762294 YP_005234291.1 CDS STMMW_32721 NC_016854.1 3461459 3461962 R pfam_scan;Pfam:PF00583; E()=2.2E-11;score=43.3;query48- 123;description=Acetyltransf_1; putative acetyltransferase complement(3461459..3461962) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762295 YP_005234292.1 CDS STMMW_32731 NC_016854.1 3461956 3462480 R pfam_scan;Pfam:PF02036; E()=2.2E-20;score=72.4;query43-133;description=SCP2; hypothetical protein complement(3461956..3462480) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762296 YP_005234293.1 CDS STMMW_32741 NC_016854.1 3462697 3463692 D pfam_scan;Pfam:PF01136; E()=4.9E-62;score=208.9;query 76-330;description=Peptidase_U32; putative protease 3462697..3463692 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762297 YP_005234294.1 CDS STMMW_32751 NC_016854.1 3463683 3464579 D pfam_scan;Pfam:PF01136; E()=3.4E-36;score=124.3;query 86-268;description=Peptidase_U32; hypothetical protein 3463683..3464579 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762298 YP_005234295.1 CDS STMMW_32761 NC_016854.1 3464757 3465764 D pfam_scan;Pfam:PF00296; E()=1.0E-32;score=113.0;query 20-304;description=Bac_luciferase; monooxygenase 3464757..3465764 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762299 YP_005234296.1 CDS STMMW_32771 NC_016854.1 3465742 3466461 R pfam_scan;Pfam:PF03734; E()=7.7E-5;score=22.6;query 79-170;description=YkuD; tmhmm; query 1-240; hypothetical protein complement(3465742..3466461) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762300 YP_005234297.1 CDS STMMW_32781 NC_016854.1 3466620 3467150 D hypothetical protein 3466620..3467150 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762301 YP_005234298.1 CDS STMMW_32791 NC_016854.1 3467211 3468371 R pfam_scan;Pfam:PF03222; E()=7.4E-150;score=498.6;query 1-374;description=Trp_Tyr_perm; tmhmm; query 1-387; amino acid permease complement(3467211..3468371) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762302 YP_005234299.1 CDS STMMW_32801 NC_016854.1 3468609 3470549 R pfam_scan;Pfam:PF03880; E()=2.1E-22;score=78.2;query506-575;description=DbpA; pfam_scan;Pfam:PF00271; E()=3.7E-26;score=89.8;query281- 357;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=3.1E-59;score=199.6;query 47-213;description=DEAD; ATP-dependent RNA helicase (dead-box protein) complement(3468609..3470549) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762303 YP_005234300.1 CDS STMMW_32811 NC_016854.1 3470677 3471561 R pfam_scan;Pfam:PF00515; E()=5.1E-4;score=19.4;query 62-94;description=TPR_1; hypothetical protein complement(3470677..3471561) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762304 YP_005234301.1 CDS STMMW_32821 NC_016854.1 3471671 3473806 R pfam_scan;Pfam:PF01138; E()=5.7E-33;score=113.3;query 15-144;description=RNase_PH; pfam_scan;Pfam:PF00575; E()=7.2E-23;score=80.0;query620-690;description=S1; pfam_scan;Pfam:PF00013; E()=3.3E-12;score=45.6;query556-612;description=KH_1; pfam_scan;Pfam:PF03726; E()=1.1E-25;score=89.5;query242-320;description=PNPase; pfam_scan;Pfam:PF03725; E()=8.7E-16;score=57.2;query147- 210;description=RNase_PH_C; polynucleotide phosphorylase complement(3471671..3473806) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762305 YP_005234302.1 CDS STMMW_32831 NC_016854.1 3474048 3474317 R pfam_scan;Pfam:PF00312; E()=4.2E-34;score=115.5;query 7-88;description=Ribosomal_S15; 30S ribosomal protein S15 complement(3474048..3474317) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762306 YP_005234303.1 CDS STMMW_32841 NC_016854.1 3474468 3475412 R pfam_scan;Pfam:PF09157; E()=1.0E-17;score=63.4;query252-309;description=TruB-C_2; pfam_scan;Pfam:PF01509; E()=2.2E-58;score=195.9;query 33-180;description=TruB_N; tRNA pseudouridine 55 synthase (psi55 synthase) (p35 protein) complement(3474468..3475412) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762307 YP_005234304.1 CDS STMMW_32851 NC_016854.1 3475412 3475813 R pfam_scan;Pfam:PF02033; E()=2.2E-36;score=123.6;query 7-112;description=RBFA; ribosome-binding factor A (P15B protein) complement(3475412..3475813) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762308 YP_005234305.1 CDS STMMW_32861 NC_016854.1 3476034 3478712 R pfam_scan;Pfam:PF03144; E()=2.2E-7;score=30.7;query 581-643;description=GTP_EFTU_D2; pfam_scan;Pfam:PF02421; E()=1.3E-4;score=21.2;query 396-556;description=FeoB_N; pfam_scan;Pfam:PF08364; E()=5.6E-17;score=60.5;query57-96;description=IF2_assoc; pfam_scan;Pfam:PF04760; E()=8.3E-6;score=25.3;query 1-52;description=IF2_N; pfam_scan;Pfam:PF00009; E()=9.9E-48;score=161.9;query 394-554;description=GTP_EFTU; protein chain initiation factor 2 complement(3476034..3478712) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762309 YP_005234306.1 CDS STMMW_32871 NC_016854.1 3478737 3480239 R pfam_scan;Pfam:PF08529; E()=3.8E-44;score=149.6;query 4-124;description=NusA_N; pfam_scan;Pfam:PF00575; E()=2.8E-6;score=27.0;query 132-201;description=S1; L factor complement(3478737..3480239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762310 YP_005234307.1 CDS STMMW_32881 NC_016854.1 3480267 3480689 R pfam_scan;Pfam:PF02576; E()=9.7E-50;score=167.8;query 2-136;description=DUF150; hypothetical protein complement(3480267..3480689) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762311 YP_005234308.1 CDS STMMW_32891 NC_016854.1 3481281 3482690 D pfam_scan;Pfam:PF00764; E()=1.5E-55;score=188.1;query 38-432;description=Arginosuc_synth; argininosuccinate synthetase 3481281..3482690 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762312 YP_005234309.1 CDS STMMW_32901 NC_016854.1 3482776 3483840 R pfam_scan;Pfam:PF09234; E()=2.9E-9;score=36.8;query 144-347;description=DUF1963; hypothetical protein complement(3482776..3483840) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762313 YP_005234310.1 CDS STMMW_32911 NC_016854.1 3484276 3484608 R pfam_scan;Pfam:PF03840; E()=6.9E-27;score=92.9;query3-74;description=SecG; tmhmm; query 1-111; protein-export membrane protein complement(3484276..3484608) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762314 YP_005234311.1 CDS STMMW_32921 NC_016854.1 3484831 3486168 R pfam_scan;Pfam:PF00408; E()=4.8E-19;score=67.6;query373- 443;description=PGM_PMM_IV; pfam_scan;Pfam:PF02880; E()=8.4E-39;score=131.7;query 258-368;description=PGM_PMM_III; pfam_scan;Pfam:PF02878; E()=2.5E-47;score=159.7;query 4-136;description=PGM_PMM_I; pfam_scan;Pfam:PF02879; E()=3.5E-22;score=78.1;query157- 254;description=PGM_PMM_II; PGM/PMM family protein complement(3484831..3486168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762315 YP_005234312.1 CDS STMMW_32931 NC_016854.1 3486161 3487009 R pfam_scan;Pfam:PF00809; E()=3.4E-80;score=268.0;query 20-227;description=Pterin_bind; dihydropteroate synthase complement(3486161..3487009) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762316 YP_005234313.1 CDS STMMW_32941 NC_016854.1 3487156 3487665 R pfam_scan;Pfam:PF01797; E()=8.5E-40;score=134.8;query 29-146;description=Transposase_17; transposase complement(3487156..3487665) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762317 YP_005234314.1 CDS STMMW_32951 NC_016854.1 3487825 3489759 R pfam_scan;Pfam:PF00004; E()=2.3E-50;score=169.6;query 188-320;description=AAA; pfam_scan;Pfam:PF06480; E()=5.4E-21;score=74.4;query5-93;description=FtsH_ext; pfam_scan;Pfam:PF01434; E()=1.3E-84;score=282.6;query 382-591;description=Peptidase_M41; tmhmm; query 1-645; cell division protein complement(3487825..3489759) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762318 YP_005234315.1 CDS STMMW_32961 NC_016854.1 3489863 3490489 R pfam_scan;Pfam:PF01728; E()=5.6E-62;score=208.4;query 32-207;description=FtsJ; cell division protein complement(3489863..3490489) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762319 YP_005234316.1 CDS STMMW_32971 NC_016854.1 3490577 3490909 D pfam_scan;Pfam:PF01985; E()=1.0E-30;score=105.2;query 16-99;description=CRS1_YhbY; hypothetical protein 3490577..3490909 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762320 YP_005234317.1 CDS STMMW_32981 NC_016854.1 3491065 3491541 R pfam_scan;Pfam:PF01272; E()=1.3E-29;score=101.4;query 83-157;description=GreA_GreB; pfam_scan;Pfam:PF03449; E()=5.1E-32;score=109.0;query 2-74;description=GreA_GreB_N; transcription elongation factor complement(3491065..3491541) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762321 YP_005234318.1 CDS STMMW_32991 NC_016854.1 3491789 3493222 D pfam_scan;Pfam:PF02113; E()=2.4E-152;score=507.0;query 60-445;description=Peptidase_S13; Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) 3491789..3493222 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762322 YP_005234319.1 CDS STMMW_33001 NC_016854.1 3493354 3494526 R pfam_scan;Pfam:PF01926; E()=1.4E-25;score=89.4;query161-286;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=3.2E-6;score=26.5;query 162-217;description=FeoB_N; pfam_scan;Pfam:PF01018; E()=7.4E-72;score=239.5;query 3-158;description=GTP1_OBG; GTP-binding protein complement(3493354..3494526) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762323 YP_005234320.1 CDS STMMW_33011 NC_016854.1 3494542 3495552 R pfam_scan;Pfam:PF00892; E()=2.7E-24;score=85.2;query32-157;description=DUF6; tmhmm; query 1-337; hypothetical protein complement(3494542..3495552) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762324 YP_005234321.1 CDS STMMW_33021 NC_016854.1 3495637 3495894 R pfam_scan;Pfam:PF01016; E()=2.5E-39;score=132.4;query 2-83;description=Ribosomal_L27; 50S ribosomal protein L27 complement(3495637..3495894) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762325 YP_005234322.1 CDS STMMW_33031 NC_016854.1 3495914 3496225 R pfam_scan;Pfam:PF00829; E()=1.9E-38;score=130.2;query 1-96;description=Ribosomal_L21p; 50S ribosomal protein L21 complement(3495914..3496225) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762326 YP_005234323.1 CDS STMMW_33041 NC_016854.1 3496483 3497454 D pfam_scan;Pfam:PF00348; E()=2.8E-90;score=301.9;query 32-282;description=polyprenyl_synt; octaprenyl-diphosphate synthase 3496483..3497454 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762327 YP_005234324.1 CDS STMMW_33051 NC_016854.1 3497686 3497973 D Ner-like regulatory protein 3497686..3497973 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762328 YP_005234325.1 CDS STMMW_33061 NC_016854.1 3498031 3499290 R pfam_scan;Pfam:PF00275; E()=2.0E-131;score=438.2;query 6-406;description=EPSP_synthase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3498031..3499290) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762329 YP_005234326.1 CDS STMMW_33071 NC_016854.1 3499344 3499637 R pfam_scan;Pfam:PF01722; E()=2.3E-21;score=75.0;query23-88;description=BolA; hypothetical protein complement(3499344..3499637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762330 YP_005234327.1 CDS STMMW_33081 NC_016854.1 3499786 3500082 R pfam_scan;Pfam:PF01740; E()=3.1E-7;score=29.5;query 41-93;description=STAS; anti-sigma factor antagonist complement(3499786..3500082) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762331 YP_005234328.1 CDS STMMW_33091 NC_016854.1 3500082 3500717 R pfam_scan;Pfam:PF05494; E()=4.1E-50;score=169.3;query 32-199;description=Tol_Tol_Ttg2; hypothetical protein complement(3500082..3500717) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762332 YP_005234329.1 CDS STMMW_33101 NC_016854.1 3500736 3501287 R pfam_scan;Pfam:PF02470; E()=6.2E-22;score=77.1;query39-116;description=MCE; tmhmm; query 1-184; hypothetical protein complement(3500736..3501287) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762333 YP_005234330.1 CDS STMMW_33111 NC_016854.1 3501292 3502074 R pfam_scan;Pfam:PF02405; E()=4.9E-75;score=251.6;query 44-257;description=DUF140; tmhmm; query 1-261; hypothetical protein complement(3501292..3502074) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762334 YP_005234331.1 CDS STMMW_33121 NC_016854.1 3502082 3502894 R pfam_scan;Pfam:PF00005; E()=1.6E-40;score=139.0;query 34-205;description=ABC_tran; ABC-transport protein, ATP-binding component complement(3502082..3502894) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762335 YP_005234332.1 CDS STMMW_33131 NC_016854.1 3503149 3504084 D pfam_scan;Pfam:PF01699; E()=6.7E-35;score=119.7;query 2-128;description=Na_Ca_ex; tmhmm; query 1-312; hypothetical protein 3503149..3504084 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762336 YP_005234333.1 CDS STMMW_33141 NC_016854.1 3504098 3505084 D pfam_scan;Pfam:PF01380; E()=5.8E-35;score=119.6;query 46-177;description=SIS; pfam_scan;Pfam:PF00571; E()=1.4E-6;score=28.0;query 195-261;description=CBS; hypothetical protein 3504098..3505084 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762337 YP_005234334.1 CDS STMMW_33151 NC_016854.1 3505105 3505671 D pfam_scan;Pfam:PF08282; E()=3.6E-11;score=42.8;query92- 158;description=Hydrolase_3; hypothetical protein 3505105..3505671 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762338 YP_005234335.1 CDS STMMW_33161 NC_016854.1 3505668 3506243 D pfam_scan;Pfam:PF06835; E()=1.0E-53;score=180.9;query 9-183;description=DUF1239; tmhmm; query 1-192; hypothetical protein 3505668..3506243 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762339 YP_005234336.1 CDS STMMW_33171 NC_016854.1 3506212 3506766 D pfam_scan;Pfam:PF03968; E()=4.5E-45;score=152.7;query 10-149;description=OstA; hypothetical protein 3506212..3506766 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762340 YP_005234337.1 CDS STMMW_33181 NC_016854.1 3506773 3507498 D pfam_scan;Pfam:PF00005; E()=2.7E-43;score=148.0;query 29-198;description=ABC_tran; ABC transport protein, ATP-binding component 3506773..3507498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762341 YP_005234338.1 CDS STMMW_33191 NC_016854.1 3507546 3508979 D pfam_scan;Pfam:PF00309; E()=4.4E-18;score=64.1;query3-49;description=Sigma54_AID; pfam_scan;Pfam:PF04963; E()=2.7E-77;score=258.0;query 107-304;description=Sigma54_CBD; pfam_scan;Pfam:PF04552; E()=2.9E-70;score=234.5;query 317-475;description=Sigma54_DBD; RNA polymerase sigma-54 factor (sigma-N) 3507546..3508979 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762342 YP_005234339.1 CDS STMMW_33201 NC_016854.1 3509002 3509289 D pfam_scan;Pfam:PF02482; E()=7.0E-35;score=118.8;query 2-95;description=Ribosomal_S30AE; putative sigma(54) modulation protein 3509002..3509289 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762343 YP_005234340.1 CDS STMMW_33211 NC_016854.1 3509407 3509898 D pfam_scan;Pfam:PF00359; E()=3.1E-35;score=120.6;query 13-155;description=PTS_EIIA_2; nitrogen regulatory IIA protein 3509407..3509898 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762344 YP_005234341.1 CDS STMMW_33221 NC_016854.1 3509944 3510798 D pfam_scan;Pfam:PF03668; E()=1.3E-146;score=486.8;query 1-282;description=ATP_bind_2; hypothetical protein 3509944..3510798 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762345 YP_005234342.1 CDS STMMW_33231 NC_016854.1 3510795 3511067 D pfam_scan;Pfam:PF00381; E()=8.1E-25;score=86.2;query3-85;description=PTS-HPr; phosphocarrier protein (nitrogen related hpr) 3510795..3511067 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762346 YP_005234343.1 CDS STMMW_33241 NC_016854.1 3511316 3511948 D pfam_scan;Pfam:PF10707; E()=7.0E-61;score=204.7;query 2-184;description=YrbL-PhoP_reg; hypothetical protein 3511316..3511948 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762347 YP_005234344.1 CDS STMMW_33251 NC_016854.1 3512023 3512751 R pfam_scan;Pfam:PF00912; E()=4.9E-56;score=188.3;query 58-228;description=Transgly; tmhmm; query 1-243; monofunctional biosynthetic peptidoglycan transglycosylase complement(3512023..3512751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762348 YP_005234345.1 CDS STMMW_33261 NC_016854.1 3512748 3513401 R pfam_scan;Pfam:PF01965; E()=2.8E-19;score=68.7;query47-201;description=DJ-1_PfpI; hypothetical protein complement(3512748..3513401) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762349 YP_005234346.1 CDS STMMW_33271 NC_016854.1 3513628 3515964 R pfam_scan;Pfam:PF00989; E()=1.8E-18;score=66.4;query156-266;description=PAS; pfam_scan;Pfam:PF02518; E()=2.9E-32;score=110.3;query 395-504;description=HATPase_c; pfam_scan;Pfam:PF00072; E()=5.8E-23;score=80.7;query528- 640;description=Response_reg; pfam_scan;Pfam:PF01627; E()=1.2E-10;score=40.6;query686-771;description=Hpt; pfam_scan;Pfam:PF00512; E()=2.6E-18;score=65.2;query283-346;description=HisKA; aerobic respiration control sensor protein complement(3513628..3515964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762350 YP_005234347.1 CDS STMMW_33281 NC_016854.1 3516058 3516987 R pfam_scan;Pfam:PF04055; E()=5.4E-15;score=55.3;query43- 202;description=Radical_SAM; hypothetical protein complement(3516058..3516987) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762351 YP_005234348.1 CDS STMMW_33291 NC_016854.1 3517659 3522119 D pfam_scan;Pfam:PF01645; E()=7.8E-164;score=544.2;query 793-1156;description=Glu_synthase; pfam_scan;Pfam:PF04898; E()=1.6E-115;score=384.6;query 456-737;description=Glu_syn_central; pfam_scan;Pfam:PF01493; E()=1.6E-76;score=255.6;query 1235-1428;description=GXGXG; pfam_scan;Pfam:PF00310; E()=1.0E-144;score=481.6;query 12-375;description=GATase_2; glutamate synthase [NADPH] large chain 3517659..3522119 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762352 YP_005234349.1 CDS STMMW_33301 NC_016854.1 3522129 3523547 D pfam_scan;Pfam:PF07992; E()=6.1E-23;score=81.3;query148- 448;description=Pyr_redox_2; pfam_scan;Pfam:PF00070; E()=1.0E-4;score=22.4;query 289-400;description=Pyr_redox; glutamate synthase (NADPH) small chain 3522129..3523547 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762353 YP_005234350.1 CDS STMMW_33311 NC_016854.1 3523754 3524857 D pfam_scan;Pfam:PF06250; E()=1.2E-126;score=421.4;query 16-347;description=DUF1016; hypothetical protein 3523754..3524857 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762354 YP_005234351.1 CDS STMMW_33321 NC_016854.1 3524974 3526227 D pfam_scan;Pfam:PF02133; E()=1.6E-72;score=244.4;query 11-397;description=Transp_cyt_pur; tmhmm; query 1-418; cytosine permease 3524974..3526227 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762355 YP_005234352.1 CDS STMMW_33331 NC_016854.1 3526214 3527494 D pfam_scan;Pfam:PF07969; E()=9.6E-59;score=199.3;query 53-378;description=Amidohydro_3; cytosine deaminase 3526214..3527494 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762356 YP_005234353.1 CDS STMMW_33341 NC_016854.1 3527577 3528044 R pfam_scan;Pfam:PF04074; E()=3.9E-50;score=169.3;query 1-150;description=DUF386; hypothetical protein complement(3527577..3528044) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762357 YP_005234354.1 CDS STMMW_33351 NC_016854.1 3528041 3528916 R pfam_scan;Pfam:PF00480; E()=2.2E-50;score=170.6;query 5-182;description=ROK; kinase complement(3528041..3528916) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762358 YP_005234355.1 CDS STMMW_33361 NC_016854.1 3528913 3529602 R pfam_scan;Pfam:PF04131; E()=2.0E-87;score=291.2;query 35-226;description=NanE; putative N-acetylmannosamine-6-phosphate 2-epimerase 2 complement(3528913..3529602) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762359 YP_005234356.1 CDS STMMW_33371 NC_016854.1 3529649 3531139 R pfam_scan;Pfam:PF07690; E()=2.8E-28;score=98.8;query26-292;description=MFS_1; tmhmm; query 1-497; putative sialic acid transporter complement(3529649..3531139) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762360 YP_005234357.1 CDS STMMW_33381 NC_016854.1 3531255 3532148 R pfam_scan;Pfam:PF00701; E()=1.8E-103;score=344.9;query 5-292;description=DHDPS; N-acetylneuraminate lyase complement(3531255..3532148) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762361 YP_005234358.1 CDS STMMW_33391 NC_016854.1 3532283 3533074 R pfam_scan;Pfam:PF00392; E()=1.2E-19;score=69.5;query32-95;description=GntR; pfam_scan;Pfam:PF07729; E()=6.5E-23;score=80.6;query126-246;description=FCD; GntR family transcriptional regulator complement(3532283..3533074) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762362 YP_005234359.1 CDS STMMW_33401 NC_016854.1 3533183 3533683 R pfam_scan;Pfam:PF04386; E()=1.9E-49;score=166.6;query 8-166;description=SspB; stringent starvation protein B complement(3533183..3533683) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762363 YP_005234360.1 CDS STMMW_33411 NC_016854.1 3533689 3534327 R pfam_scan;Pfam:PF00043; E()=2.1E-13;score=49.6;query102-193;description=GST_C; pfam_scan;Pfam:PF02798; E()=1.2E-18;score=66.3;query10-81;description=GST_N; stringent starvation protein A complement(3533689..3534327) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762364 YP_005234361.1 CDS STMMW_33421 NC_016854.1 3534590 3535342 R pfam_scan;Pfam:PF06877; E()=2.4E-20;score=72.2;query142-244;description=DUF1260; pfam_scan;Pfam:PF05117; E()=1.1E-37;score=128.7;query 3-136;description=DUF695; hypothetical protein complement(3534590..3535342) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762365 YP_005234362.1 CDS STMMW_33431 NC_016854.1 3535542 3535934 R pfam_scan;Pfam:PF00380; E()=1.3E-52;score=177.0;query 10-130;description=Ribosomal_S9; 30S ribosomal protein S9 complement(3535542..3535934) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762366 YP_005234363.1 CDS STMMW_33441 NC_016854.1 3535950 3536378 R pfam_scan;Pfam:PF00572; E()=4.7E-58;score=194.3;query 15-141;description=Ribosomal_L13; 50S ribosomal protein L13 complement(3535950..3536378) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762367 YP_005234364.1 CDS STMMW_33451 NC_016854.1 3536681 3537805 R pfam_scan;Pfam:PF03969; E()=2.1E-159;score=529.5;query 5-371;description=AFG1_ATPase; putative ATP/GTP-binding protein complement(3536681..3537805) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762368 YP_005234365.1 CDS STMMW_33461 NC_016854.1 3537992 3538396 D pfam_scan;Pfam:PF06295; E()=1.5E-57;score=192.6;query 7-132;description=DUF1043; tmhmm; query 1-135; hypothetical protein 3537992..3538396 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762369 YP_005234366.1 CDS STMMW_33471 NC_016854.1 3538553 3539920 D pfam_scan;Pfam:PF00089; E()=7.5E-17;score=61.0;query93-250;description=Trypsin; pfam_scan;Pfam:PF00595; E()=6.0E-14;score=51.1;query263-345;description=PDZ; tmhmm; query 1-456; serine protease 3538553..3539920 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762370 YP_005234367.1 CDS STMMW_33481 NC_016854.1 3540013 3541083 D pfam_scan;Pfam:PF00089; E()=2.5E-17;score=62.5;query63-239;description=Trypsin; pfam_scan;Pfam:PF00595; E()=1.3E-11;score=43.6;query255-336;description=PDZ; tmhmm; query 1-357; serine protease 3540013..3541083 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762371 YP_005234368.1 CDS STMMW_33491 NC_016854.1 3541117 3541848 R pfam_scan;Pfam:PF01874; E()=2.1E-7;score=30.1;query 125-217;description=CitG; hypothetical protein complement(3541117..3541848) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762372 YP_005234369.1 CDS STMMW_33501 NC_016854.1 3541868 3543169 R pfam_scan;Pfam:PF03977; E()=1.3E-173;score=577.1;query 19-430;description=OAD_beta; tmhmm; query 1-434; oxaloacetate decarboxylase beta chain 2 complement(3541868..3543169) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762373 YP_005234370.1 CDS STMMW_33511 NC_016854.1 3543185 3544960 R pfam_scan;Pfam:PF00682; E()=4.4E-51;score=173.7;query 11-250;description=HMGL-like; pfam_scan;Pfam:PF00364; E()=1.4E-19;score=69.3;query525- 590;description=Biotin_lipoyl; pfam_scan;Pfam:PF02436; E()=3.9E-64;score=215.9;query 290-492;description=PYC_OADA; oxaloacetate decarboxylase subunit alpha complement(3543185..3544960) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762374 YP_005234371.1 CDS STMMW_33521 NC_016854.1 3545386 3546003 R pfam_scan;Pfam:PF05683; E()=5.2E-43;score=145.9;query 5-182;description=Fumerase_C; tartrate dehydratase complement(3545386..3546003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762375 YP_005234372.1 CDS STMMW_33541 NC_016854.1 3546935 3548203 R pfam_scan;Pfam:PF00939; E()=4.3E-30;score=104.0;query 7-413;description=Na_sulph_symp; tmhmm; query 1-423; membrane transport protein complement(3546935..3548203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762377 YP_005234373.1 CDS STMMW_33551 NC_016854.1 3548414 3549079 R pfam_scan;Pfam:PF00392; E()=1.2E-13;score=50.4;query15-76;description=GntR; pfam_scan;Pfam:PF07729; E()=3.3E-22;score=78.4;query86-204;description=FCD; LysR family transcriptional regulator complement(3548414..3549079) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762378 YP_005234374.1 CDS STMMW_33561 NC_016854.1 3549066 3549695 R pfam_scan;Pfam:PF00392; E()=1.6E-15;score=56.4;query10-68;description=GntR; pfam_scan;Pfam:PF07729; E()=1.2E-5;score=24.9;query 119-189;description=FCD; GntR family transcriptional regulator complement(3549066..3549695) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762379 YP_005234375.1 CDS STMMW_33571 NC_016854.1 3549815 3550753 R pfam_scan;Pfam:PF02866; E()=6.7E-46;score=155.8;query 147-309;description=Ldh_1_C; pfam_scan;Pfam:PF00056; E()=2.3E-45;score=153.6;query 1-144;description=Ldh_1_N; malate dehydrogenase complement(3549815..3550753) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762380 YP_005234376.1 CDS STMMW_33581 NC_016854.1 3551167 3551637 D pfam_scan;Pfam:PF02863; E()=2.4E-22;score=77.8;query82- 150;description=Arg_repressor_C; pfam_scan;Pfam:PF01316; E()=1.1E-21;score=75.9;query6- 73;description=Arg_repressor; arginine repressor 3551167..3551637 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762381 YP_005234377.1 CDS STMMW_33591 NC_016854.1 3552002 3552265 D pfam_scan;Pfam:PF07338; E()=2.4E-25;score=88.3;query24-87;description=DUF1471; hypothetical protein 3552002..3552265 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762382 YP_005234378.1 CDS STMMW_33601 NC_016854.1 3552369 3552635 D pfam_scan;Pfam:PF07338; E()=3.2E-26;score=91.0;query26-88;description=DUF1471; tmhmm; query 1-89; hypothetical protein 3552369..3552635 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762383 YP_005234379.1 CDS STMMW_33611 NC_016854.1 3552695 3552967 R pfam_scan;Pfam:PF01337; E()=3.9E-16;score=58.0;query4-83;description=Barstar; hypothetical protein complement(3552695..3552967) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762384 YP_005234380.1 CDS STMMW_33621 NC_016854.1 3553139 3555106 R pfam_scan;Pfam:PF04632; E()=1.5E-138;score=462.8;query 11-654;description=FUSC; tmhmm; query 1-656; hypothetical protein complement(3553139..3555106) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762385 YP_005234381.1 CDS STMMW_33631 NC_016854.1 3555112 3556044 R pfam_scan;Pfam:PF00529; E()=1.5E-29;score=103.2;query 101-285;description=HlyD; tmhmm; query 1-311; hypothetical protein complement(3555112..3556044) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762386 YP_005234382.1 CDS STMMW_33641 NC_016854.1 3556052 3556255 R pfam_scan;Pfam:PF07869; E()=8.8E-20;score=69.7;query6-62;description=DUF1656; tmhmm; query 1-68; hypothetical protein complement(3556052..3556255) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762387 YP_005234383.1 CDS STMMW_33651 NC_016854.1 3556437 3557366 D pfam_scan;Pfam:PF00126; E()=3.7E-19;score=68.0;query4-63;description=HTH_1; pfam_scan;Pfam:PF03466; E()=7.3E-40;score=135.9;query 89-291;description=LysR_substrate; LysR family transcriptional regulator 3556437..3557366 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762388 YP_005234384.1 CDS STMMW_33661 NC_016854.1 3557489 3558934 R pfam_scan;Pfam:PF01523; E()=1.4E-68;score=231.2;query 34-332;description=PmbA_TldD; TldD protein complement(3557489..3558934) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762389 YP_005234385.1 CDS STMMW_33671 NC_016854.1 3559079 3562792 R hypothetical protein complement(3559079..3562792) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762390 YP_005234386.1 CDS STMMW_33681 NC_016854.1 3562986 3564455 R pfam_scan;Pfam:PF10150; E()=3.9E-113;score=377.1;query 124-394;description=RNase_E_G; pfam_scan;Pfam:PF00575; E()=6.6E-12;score=45.0;query37-121;description=S1; ribonuclease G complement(3562986..3564455) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762391 YP_005234387.1 CDS STMMW_33691 NC_016854.1 3564445 3565038 R pfam_scan;Pfam:PF02545; E()=1.2E-70;score=236.6;query 3-191;description=Maf; hypothetical protein complement(3564445..3565038) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762392 YP_005234388.1 CDS STMMW_33701 NC_016854.1 3565047 3565538 R pfam_scan;Pfam:PF04093; E()=7.3E-47;score=158.5;query 6-156;description=MreD; tmhmm; query 1-164; rod shape-determining protein complement(3565047..3565538) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762393 YP_005234389.1 CDS STMMW_33711 NC_016854.1 3565538 3566590 R pfam_scan;Pfam:PF04085; E()=1.2E-52;score=177.2;query 121-271;description=MreC; tmhmm; query 1-351; rod shape-determining protein complement(3565538..3566590) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762394 YP_005234390.1 CDS STMMW_33721 NC_016854.1 3566655 3567698 R pfam_scan;Pfam:PF06723; E()=6.3E-152;score=504.8;query 10-338;description=MreB_Mbl; rod shape-determining protein complement(3566655..3567698) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762395 YP_005234391.1 CDS STMMW_33731 NC_016854.1 3568006 3569946 R pfam_scan;Pfam:PF00563; E()=9.1E-36;score=123.1;query 403-628;description=EAL; pfam_scan;Pfam:PF00990; E()=1.4E-23;score=82.9;query224-380;description=GGDEF; tmhmm; query 1-647; putative lipoprotein complement(3568006..3569946) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762396 YP_005234392.1 CDS STMMW_33741 NC_016854.1 3570150 3571124 D pfam_scan;Pfam:PF08240; E()=5.5E-6;score=25.6;query 28-85;description=ADH_N; pfam_scan;Pfam:PF00107; E()=5.4E-17;score=61.8;query149- 282;description=ADH_zinc_N; oxidoreductase 3570150..3571124 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762397 YP_005234393.1 CDS STMMW_33751 NC_016854.1 3571237 3572241 D pfam_scan;Pfam:PF00174; E()=4.9E-42;score=142.9;query 108-268;description=Oxidored_molyb; hypothetical protein 3571237..3572241 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762398 YP_005234394.1 CDS STMMW_33761 NC_016854.1 3572242 3572841 D pfam_scan;Pfam:PF01794; E()=2.6E-18;score=65.8;query47- 161;description=Ferric_reduct; tmhmm; query 1-200; hypothetical protein 3572242..3572841 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762399 YP_005234395.1 CDS STMMW_33771 NC_016854.1 3573234 3573704 D pfam_scan;Pfam:PF00364; E()=3.8E-25;score=87.1;query83- 155;description=Biotin_lipoyl; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3573234..3573704 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762400 YP_005234396.1 CDS STMMW_33781 NC_016854.1 3573715 3575064 D pfam_scan;Pfam:PF02786; E()=7.8E-78;score=260.3;query 115-323;description=CPSase_L_D2; pfam_scan;Pfam:PF02785; E()=6.0E-39;score=131.8;query 336-441;description=Biotin_carb_C; pfam_scan;Pfam:PF00289; E()=1.2E-45;score=154.0;query 1-110;description=CPSase_L_chain; biotin carboxylase 3573715..3575064 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762401 YP_005234397.1 CDS STMMW_33791 NC_016854.1 3575173 3575415 D pfam_scan;Pfam:PF06196; E()=5.9E-30;score=102.1;query 7-78;description=DUF997; tmhmm; query 1-81; hypothetical protein 3575173..3575415 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762402 YP_005234398.1 CDS STMMW_33801 NC_016854.1 3575405 3576856 D pfam_scan;Pfam:PF00474; E()=7.9E-140;score=465.7;query 36-432;description=SSF; tmhmm; query 1-484; sodium/pantothenate symporter (pantothenate permease) 3575405..3576856 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762403 YP_005234399.1 CDS STMMW_33811 NC_016854.1 3576868 3577749 D pfam_scan;Pfam:PF06325; E()=1.7E-114;score=381.9;query 2-293;description=PrmA; 50S ribosomal protein L11 methyltransferase 3576868..3577749 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762404 YP_005234400.1 CDS STMMW_33821 NC_016854.1 3578410 3579375 D pfam_scan;Pfam:PF01207; E()=1.2E-119;score=398.4;query 14-319;description=Dus; hypothetical protein 3578410..3579375 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762405 YP_005234401.1 CDS STMMW_33831 NC_016854.1 3579401 3579697 D pfam_scan;Pfam:PF02954; E()=2.0E-13;score=49.2;query55-95;description=HTH_8; Fis DNA-binding protein 3579401..3579697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762406 YP_005234402.1 CDS STMMW_33841 NC_016854.1 3579783 3580667 D pfam_scan;Pfam:PF01555; E()=1.0E-62;score=210.9;query 34-251;description=N6_N4_Mtase; putative adenine-specific DNA-modification methylase 3579783..3580667 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762407 YP_005234403.1 CDS STMMW_33851 NC_016854.1 3580750 3580914 D pfam_scan;Pfam:PF10831; E()=1.8E-38;score=129.2;query 1-53;description=DUF2556; tmhmm; query 1-55; hypothetical protein 3580750..3580914 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762408 YP_005234404.1 CDS STMMW_33861 NC_016854.1 3581065 3583164 D pfam_scan;Pfam:PF03707; E()=4.5E-16;score=58.7;query52-112;description=MHYT; pfam_scan;Pfam:PF00563; E()=4.6E-71;score=238.6;query 439-672;description=EAL; pfam_scan;Pfam:PF00990; E()=3.0E-45;score=153.4;query 261-416;description=GGDEF; tmhmm; query 1-700; hypothetical protein 3581065..3583164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762409 YP_005234405.1 CDS STMMW_33871 NC_016854.1 3583167 3583829 R pfam_scan;Pfam:PF08361; E()=7.0E-46;score=154.6;query 84-202;description=TetR_C_2; pfam_scan;Pfam:PF00440; E()=1.1E-16;score=59.6;query16-62;description=TetR_N; transcriptional repressor complement(3583167..3583829) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762410 YP_005234406.1 CDS STMMW_33891 NC_016854.1 3584243 3585400 D pfam_scan;Pfam:PF00529; E()=6.7E-88;score=294.8;query 63-360;description=HlyD; acriflavine resistance protein E (protein envc) 3584243..3585400 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762411 YP_005234407.1 CDS STMMW_33901 NC_016854.1 3585412 3588525 D pfam_scan;Pfam:PF00873; E()=0.0;score=1468.0;query 1-1029;description=ACR_tran; tmhmm; query 1-1038; acriflavin resistance protein F 3585412..3588525 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762412 YP_005234408.1 CDS STMMW_33911 NC_016854.1 3588761 3588982 D pfam_scan;Pfam:PF08139; E()=1.8E-4;score=21.4;query 1-19;description=VirB; tmhmm; query 1-74; lipoprotein 3588761..3588982 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762413 YP_005234409.1 CDS STMMW_33921 NC_016854.1 3595580 3596134 D putative transferase 3595580..3596134 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762419 YP_005234410.1 CDS STMMW_33931 NC_016854.1 3596110 3596367 R pfam_scan;Pfam:PF07369; E()=2.7E-26;score=90.6;query4-85;description=DUF1488; hypothetical protein complement(3596110..3596367) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762420 YP_005234411.1 CDS STMMW_33941 NC_016854.1 3596364 3597182 R pfam_scan;Pfam:PF01488; E()=6.3E-19;score=67.5;query116- 213;description=Shikimate_DH; pfam_scan;Pfam:PF08501; E()=2.9E-21;score=74.9;query6- 88;description=Shikimate_dh_N; shikimate dehydrogenase complement(3596364..3597182) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762421 YP_005234412.1 CDS STMMW_33951 NC_016854.1 3597187 3597759 R pfam_scan;Pfam:PF01300; E()=1.2E-46;score=158.0;query 16-190;description=Sua5_yciO_yrdC; hypothetical protein complement(3597187..3597759) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762422 YP_005234413.1 CDS STMMW_33961 NC_016854.1 3597764 3598306 R pfam_scan;Pfam:PF01396; E()=2.1E-15;score=54.9;query13-49;description=zf- C4_Topoisom; hypothetical protein complement(3597764..3598306) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762423 YP_005234414.1 CDS STMMW_33971 NC_016854.1 3598333 3598806 R pfam_scan;Pfam:PF04361; E()=1.2E-66;score=222.5;query 1-157;description=DUF494; hypothetical protein complement(3598333..3598806) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762424 YP_005234415.1 CDS STMMW_33981 NC_016854.1 3598778 3599902 R pfam_scan;Pfam:PF02481; E()=4.1E-76;score=254.7;query 70-274;description=DNA_processg_A; hypothetical protein complement(3598778..3599902) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762425 YP_005234416.1 CDS STMMW_33991 NC_016854.1 3600034 3600543 D pfam_scan;Pfam:PF01327; E()=3.5E-58;score=194.9;query 4-152;description=Pep_deformylase; polypeptide deformylase 3600034..3600543 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759563 YP_005234417.1 CDS STMMW_34001 NC_016854.1 3600559 3601506 D pfam_scan;Pfam:PF00551; E()=1.6E-56;score=190.6;query 6-183;description=Formyl_trans_N; pfam_scan;Pfam:PF02911; E()=2.9E-34;score=116.8;query 207-305;description=Formyl_trans_C; methionyl-tRNA formyltransferase 3600559..3601506 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762426 YP_005234418.1 CDS STMMW_34011 NC_016854.1 3601558 3602847 D pfam_scan;Pfam:PF01029; E()=2.3E-28;score=98.2;query6-127;description=NusB; pfam_scan;Pfam:PF01189; E()=2.1E-109;score=364.4;query 164-426;description=Nol1_Nop2_Fmu; 16S rRNA methyltransferase B 3601558..3602847 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762427 YP_005234419.1 CDS STMMW_34021 NC_016854.1 3602869 3604245 D pfam_scan;Pfam:PF02254; E()=3.2E-28;score=97.9;query3-111;description=TrkA_N; pfam_scan;Pfam:PF02080; E()=5.6E-10;score=38.6;query157-225;description=TrkA_C; potassium transport protein 3602869..3604245 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762428 YP_005234420.1 CDS STMMW_34031 NC_016854.1 3604387 3604800 D pfam_scan;Pfam:PF01741; E()=3.3E-57;score=191.6;query 3-133;description=MscL; tmhmm; query 1-138; large-conductance mechanosensitive channel 3604387..3604800 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762429 YP_005234421.1 CDS STMMW_34041 NC_016854.1 3604736 3605005 R pfam_scan;Pfam:PF03889; E()=1.6E-19;score=68.1;query9-45;description=DUF331; hypothetical protein complement(3604736..3605005) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762430 YP_005234422.1 CDS STMMW_34051 NC_016854.1 3605063 3605488 R pfam_scan;Pfam:PF09278; E()=6.3E-21;score=73.7;query45-110;description=MerR-DNA- bind; pfam_scan;Pfam:PF00376; E()=2.5E-13;score=48.9;query3-40;description=MerR; putative Zn(II)-responsive regulator complement(3605063..3605488) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762431 YP_005234423.1 CDS STMMW_34061 NC_016854.1 3605499 3605867 R pfam_scan;Pfam:PF09350; E()=2.1E-25;score=87.9;query7-74;description=DUF1992; hypothetical protein complement(3605499..3605867) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762432 YP_005234424.1 CDS STMMW_34071 NC_016854.1 3605975 3606358 R pfam_scan;Pfam:PF01196; E()=6.0E-41;score=138.1;query 20-116;description=Ribosomal_L17; 50S ribosomal protein L17 complement(3605975..3606358) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762433 YP_005234425.1 CDS STMMW_34081 NC_016854.1 3606399 3607388 R pfam_scan;Pfam:PF03118; E()=3.3E-24;score=83.6;query248- 308;description=RNA_pol_A_CTD; pfam_scan;Pfam:PF01000; E()=4.3E-36;score=123.5;query 59-178;description=RNA_pol_A_bac; pfam_scan;Pfam:PF01193; E()=5.3E-28;score=98.1;query28-233;description=RNA_pol_L; DNA-directed RNA polymerase subunit alpha complement(3606399..3607388) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762434 YP_005234426.1 CDS STMMW_34091 NC_016854.1 3607414 3608034 R pfam_scan;Pfam:PF01479; E()=8.1E-20;score=69.5;query97-143;description=S4; pfam_scan;Pfam:PF00163; E()=4.6E-29;score=100.1;query 2-95;description=Ribosomal_S4; 30S ribosomal protein S4 complement(3607414..3608034) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762435 YP_005234427.1 CDS STMMW_34101 NC_016854.1 3608068 3608400 R pfam_scan;Pfam:PF00411; E()=1.7E-51;score=172.7;query 1-109;description=Ribosomal_S11; 30S ribosomal protein S11 complement(3608068..3608400) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762436 YP_005234428.1 CDS STMMW_34111 NC_016854.1 3608474 3608830 R pfam_scan;Pfam:PF00416; E()=1.6E-42;score=143.8;query 3-108;description=Ribosomal_S13; 30S ribosomal protein S13 complement(3608474..3608830) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762437 YP_005234429.1 CDS STMMW_34121 NC_016854.1 3608977 3609093 R pfam_scan;Pfam:PF00444; E()=6.2E-21;score=73.3;query1- 38;description=Ribosomal_L36; 50S ribosomal protein L36 complement(3608977..3609093) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762438 YP_005234430.1 CDS STMMW_34131 NC_016854.1 3609125 3610456 R pfam_scan;Pfam:PF00344; E()=4.2E-136;score=452.8;query 76-417;description=SecY; tmhmm; query 1-444; preprotein translocase subunit complement(3609125..3610456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762439 YP_005234431.1 CDS STMMW_34141 NC_016854.1 3610464 3610898 R pfam_scan;Pfam:PF00828; E()=6.4E-25;score=87.7;query27- 143;description=Ribosomal_L18e; 50S ribosomal protein L15 complement(3610464..3610898) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762440 YP_005234432.1 CDS STMMW_34151 NC_016854.1 3610902 3611081 R pfam_scan;Pfam:PF00327; E()=5.0E-22;score=76.8;query4- 55;description=Ribosomal_L30; 50S ribosomal protein L30 complement(3610902..3611081) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762441 YP_005234433.1 CDS STMMW_34161 NC_016854.1 3611085 3611588 R pfam_scan;Pfam:PF00333; E()=2.6E-29;score=100.3;query 10-75;description=Ribosomal_S5; pfam_scan;Pfam:PF03719; E()=5.2E-32;score=108.9;query 85-158;description=Ribosomal_S5_C; 30S ribosomal protein S5 complement(3611085..3611588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762442 YP_005234434.1 CDS STMMW_34171 NC_016854.1 3611603 3611956 R pfam_scan;Pfam:PF00861; E()=6.2E-40;score=135.6;query 2-117;description=Ribosomal_L18p; 50S ribosomal protein L18 complement(3611603..3611956) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762443 YP_005234435.1 CDS STMMW_34181 NC_016854.1 3611966 3612499 R pfam_scan;Pfam:PF00347; E()=7.9E-17;score=60.9;query11- 82;description=Ribosomal_L6; 50S ribosomal protein L6 complement(3611966..3612499) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762444 YP_005234436.1 CDS STMMW_34191 NC_016854.1 3612512 3612904 R pfam_scan;Pfam:PF00410; E()=2.4E-51;score=172.7;query 5-129;description=Ribosomal_S8; 30S ribosomal protein S8 complement(3612512..3612904) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762445 YP_005234437.1 CDS STMMW_34201 NC_016854.1 3612938 3613243 R pfam_scan;Pfam:PF00253; E()=6.2E-25;score=85.5;query47- 100;description=Ribosomal_S14; 30S ribosomal protein S14 complement(3612938..3613243) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762446 YP_005234438.1 CDS STMMW_34211 NC_016854.1 3613258 3613797 R pfam_scan;Pfam:PF00281; E()=9.7E-26;score=88.7;query24- 80;description=Ribosomal_L5; pfam_scan;Pfam:PF00673; E()=3.3E-44;score=148.2;query 84-178;description=Ribosomal_L5_C; 50S ribosomal protein L5 complement(3613258..3613797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762447 YP_005234439.1 CDS STMMW_34221 NC_016854.1 3613812 3614126 R pfam_scan;Pfam:PF00467; E()=2.0E-6;score=27.2;query 8-37;description=KOW; 50S ribosomal protein L24 complement(3613812..3614126) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762448 YP_005234440.1 CDS STMMW_34231 NC_016854.1 3614137 3614508 R pfam_scan;Pfam:PF00238; E()=1.9E-55;score=185.8;query 1-123;description=Ribosomal_L14; 50S ribosomal protein L14 complement(3614137..3614508) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762449 YP_005234441.1 CDS STMMW_34241 NC_016854.1 3614672 3614926 R pfam_scan;Pfam:PF00366; E()=1.4E-31;score=107.7;query 10-78;description=Ribosomal_S17; 30S ribosomal protein S17 complement(3614672..3614926) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762450 YP_005234442.1 CDS STMMW_34251 NC_016854.1 3615117 3615527 R pfam_scan;Pfam:PF00252; E()=8.8E-58;score=193.4;query 4-131;description=Ribosomal_L16; 50S ribosomal protein L16 complement(3615117..3615527) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762451 YP_005234443.1 CDS STMMW_34261 NC_016854.1 3615540 3616241 R pfam_scan;Pfam:PF00417; E()=9.2E-24;score=82.8;query1- 61;description=Ribosomal_S3_N; pfam_scan;Pfam:PF00189; E()=6.1E-38;score=128.1;query 119-202;description=Ribosomal_S3_C; pfam_scan;Pfam:PF07650; E()=1.1E-17;score=63.0;query64-117;description=KH_2; 30S ribosomal protein S3 complement(3615540..3616241) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762452 YP_005234444.1 CDS STMMW_34271 NC_016854.1 3616259 3616591 R pfam_scan;Pfam:PF00237; E()=1.0E-45;score=153.8;query 5-108;description=Ribosomal_L22; 50S ribosomal protein L22 complement(3616259..3616591) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762453 YP_005234445.1 CDS STMMW_34281 NC_016854.1 3616606 3616884 R pfam_scan;Pfam:PF00203; E()=1.7E-37;score=126.4;query 3-83;description=Ribosomal_S19; 30S ribosomal protein S19 complement(3616606..3616884) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762454 YP_005234446.1 CDS STMMW_34291 NC_016854.1 3616901 3617722 R pfam_scan;Pfam:PF03947; E()=5.3E-57;score=190.8;query 124-250;description=Ribosomal_L2_C; pfam_scan;Pfam:PF00181; E()=1.5E-36;score=123.6;query 42-117;description=Ribosomal_L2; 50S ribosomal protein L2 complement(3616901..3617722) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762455 YP_005234447.1 CDS STMMW_34301 NC_016854.1 3617740 3618042 R pfam_scan;Pfam:PF00276; E()=1.5E-32;score=110.5;query 9-96;description=Ribosomal_L23; 50S ribosomal protein L23 complement(3617740..3618042) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762456 YP_005234448.1 CDS STMMW_34311 NC_016854.1 3618039 3618644 R pfam_scan;Pfam:PF00573; E()=7.0E-76;score=253.2;query 13-198;description=Ribosomal_L4; 50S ribosomal protein L4 complement(3618039..3618644) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762457 YP_005234449.1 CDS STMMW_34321 NC_016854.1 3618655 3619284 R pfam_scan;Pfam:PF00297; E()=1.1E-75;score=253.0;query 8-204;description=Ribosomal_L3; 50S ribosomal protein L3 complement(3618655..3619284) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762458 YP_005234450.1 CDS STMMW_34331 NC_016854.1 3619317 3619628 R pfam_scan;Pfam:PF00338; E()=3.5E-44;score=148.4;query 6-101;description=Ribosomal_S10; 30S ribosomal protein S10 complement(3619317..3619628) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762459 YP_005234451.1 CDS STMMW_34341 NC_016854.1 3620008 3620475 D pfam_scan;Pfam:PF01478; E()=1.3E-26;score=92.5;query9- 113;description=Peptidase_A24; tmhmm; query 1-156; Type III leader peptidase 3620008..3620475 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762460 YP_005234452.1 CDS STMMW_34351 NC_016854.1 3620472 3620948 R pfam_scan;Pfam:PF00210; E()=2.0E-39;score=134.2;query 8-143;description=Ferritin; bacterioferritin complement(3620472..3620948) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762461 YP_005234453.1 CDS STMMW_34361 NC_016854.1 3621021 3621215 R pfam_scan;Pfam:PF04324; E()=8.9E-16;score=57.0;query1-53;description=Fer2_BFD; bacterioferritin-associated ferredoxin complement(3621021..3621215) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762462 YP_005234454.1 CDS STMMW_34371 NC_016854.1 3621400 3622584 R pfam_scan;Pfam:PF03143; E()=8.3E-42;score=140.9;query 298-392;description=GTP_EFTU_D3; pfam_scan;Pfam:PF03144; E()=2.1E-22;score=78.5;query225- 294;description=GTP_EFTU_D2; pfam_scan;Pfam:PF00009; E()=5.2E-68;score=228.0;query 10-201;description=GTP_EFTU; elongation factor Tu complement(3621400..3622584) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762463 YP_005234455.1 CDS STMMW_34381 NC_016854.1 3622656 3624770 R pfam_scan;Pfam:PF00679; E()=1.8E-29;score=100.9;query 611-696;description=EFG_C; pfam_scan;Pfam:PF03144; E()=1.2E-16;score=60.2;query331- 398;description=GTP_EFTU_D2; pfam_scan;Pfam:PF03764; E()=9.8E-49;score=163.8;query 486-609;description=EFG_IV; pfam_scan;Pfam:PF00009; E()=1.2E-62;score=210.5;query 9-288;description=GTP_EFTU; elongation factor G complement(3622656..3624770) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762464 YP_005234456.1 CDS STMMW_34391 NC_016854.1 3624867 3625337 R pfam_scan;Pfam:PF00177; E()=3.0E-66;score=221.3;query 1-149;description=Ribosomal_S7; 30S ribosomal protein S7 complement(3624867..3625337) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762465 YP_005234457.1 CDS STMMW_34401 NC_016854.1 3625433 3625807 R pfam_scan;Pfam:PF00164; E()=1.4E-57;score=192.7;query 3-123;description=Ribosomal_S12; 30S ribosomal protein S12 complement(3625433..3625807) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762466 YP_005234458.1 CDS STMMW_34411 NC_016854.1 3625933 3626220 R pfam_scan;Pfam:PF04077; E()=1.6E-27;score=94.3;query13-93;description=DsrH; hypothetical protein complement(3625933..3626220) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762467 YP_005234459.1 CDS STMMW_34421 NC_016854.1 3626228 3626584 R pfam_scan;Pfam:PF02635; E()=2.1E-19;score=69.1;query2-118;description=DrsE; hypothetical protein complement(3626228..3626584) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762468 YP_005234460.1 CDS STMMW_34431 NC_016854.1 3626584 3626970 R pfam_scan;Pfam:PF02635; E()=7.1E-22;score=77.0;query1-128;description=DrsE; hypothetical protein complement(3626584..3626970) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762469 YP_005234461.1 CDS STMMW_34441 NC_016854.1 3626970 3627692 R pfam_scan;Pfam:PF08348; E()=1.2E-39;score=134.5;query 28-141;description=PAS_6; hypothetical protein complement(3626970..3627692) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762470 YP_005234462.1 CDS STMMW_34451 NC_016854.1 3627969 3628787 R pfam_scan;Pfam:PF01346; E()=4.3E-34;score=116.8;query 26-152;description=FKBP_N; pfam_scan;Pfam:PF00254; E()=1.4E-32;score=111.4;query 157-246;description=FKBP_C; FKBP-type peptidyl-prolyl isomerase complement(3627969..3628787) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762471 YP_005234463.1 CDS STMMW_34461 NC_016854.1 3629007 3629225 D pfam_scan;Pfam:PF04102; E()=4.4E-25;score=87.0;query6-72;description=SlyX; hypothetical protein 3629007..3629225 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762472 YP_005234464.1 CDS STMMW_34471 NC_016854.1 3629413 3630003 R pfam_scan;Pfam:PF00254; E()=7.9E-9;score=35.4;query 3-136;description=FKBP_C; FkbP-type peptidyl-prolyl cis-trans isomerase complement(3629413..3630003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762473 YP_005234465.1 CDS STMMW_34481 NC_016854.1 3630098 3630298 R pfam_scan;Pfam:PF09526; E()=1.2E-24;score=85.1;query4-63;description=DUF2387; hypothetical protein complement(3630098..3630298) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762474 YP_005234466.1 CDS STMMW_34491 NC_016854.1 3630309 3632114 R pfam_scan;Pfam:PF00999; E()=2.1E-72;score=244.0;query 11-374;description=Na_H_Exchanger; pfam_scan;Pfam:PF02254; E()=1.6E-24;score=86.0;query403-514;description=TrkA_N; tmhmm; query 1-602; glutathione-regulated potassium-efflux system protein (K(+)/H(+)antiporter) complement(3630309..3632114) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762475 YP_005234467.1 CDS STMMW_34501 NC_016854.1 3632114 3632665 R pfam_scan;Pfam:PF02525; E()=1.5E-43;score=148.3;query 6-173;description=Flavodoxin_2; putative oxidoreductase complement(3632114..3632665) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762476 YP_005234468.1 CDS STMMW_34511 NC_016854.1 3632931 3634838 D pfam_scan;Pfam:PF00005; E()=4.6E-35;score=121.1;query 27-208;description=ABC_tran; ABC transporter ATP-binding protein 3632931..3634838 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762477 YP_005234469.1 CDS STMMW_34521 NC_016854.1 3635224 3635535 R pfam_scan;Pfam:PF08803; E()=5.9E-45;score=150.7;query 5-101;description=ydhR; hypothetical protein complement(3635224..3635535) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762478 YP_005234470.1 CDS STMMW_34531 NC_016854.1 3635733 3636800 D pfam_scan;Pfam:PF00561; E()=9.7E-26;score=90.2;query121- 328;description=Abhydrolase_1; hypothetical protein 3635733..3636800 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762479 YP_005234471.1 CDS STMMW_34541 NC_016854.1 3636797 3637015 D pfam_scan;Pfam:PF06794; E()=2.0E-36;score=122.6;query 1-70;description=UPF0270; hypothetical protein 3636797..3637015 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762480 YP_005234472.1 CDS STMMW_34551 NC_016854.1 3637067 3637936 D pfam_scan;Pfam:PF00485; E()=1.2E-74;score=249.7;query 7-214;description=PRK; phosphoribulokinase 3637067..3637936 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762481 YP_005234473.1 CDS STMMW_34561 NC_016854.1 3638032 3638436 R pfam_scan;Pfam:PF02566; E()=1.1E-21;score=76.6;query30-127;description=OsmC; hypothetical protein complement(3638032..3638436) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762482 YP_005234474.1 CDS STMMW_34571 NC_016854.1 3638744 3639376 D pfam_scan;Pfam:PF00325; E()=3.3E-14;score=51.5;query166-197;description=Crp; pfam_scan;Pfam:PF00027; E()=5.2E-25;score=86.5;query22- 112;description=cNMP_binding; cyclic AMP receptor protein,catabolite gene activator 3638744..3639376 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762483 YP_005234475.1 CDS STMMW_34581 NC_016854.1 3639425 3641512 D tmhmm; query 1-696; membrane protein 3639425..3641512 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762484 YP_005234476.1 CDS STMMW_34591 NC_016854.1 3641555 3642772 R pfam_scan;Pfam:PF00202; E()=2.8E-129;score=430.4;query 29-347;description=Aminotran_3; Acetylornithine aminotransferase complement(3641555..3642772) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762485 YP_005234477.1 CDS STMMW_34601 NC_016854.1 3642858 3643421 R pfam_scan;Pfam:PF00117; E()=1.7E-68;score=229.4;query 3-185;description=GATase; para-aminobenzoate synthase, glutamine amidotransferase component II complement(3642858..3643421) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762486 YP_005234478.1 CDS STMMW_34611 NC_016854.1 3643453 3644055 R pfam_scan;Pfam:PF02661; E()=1.8E-10;score=41.1;query58-152;description=Fic; cell filamentation protein Fic complement(3643453..3644055) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762487 YP_005234479.1 CDS STMMW_34621 NC_016854.1 3644045 3644212 R pfam_scan;Pfam:PF10832; E()=3.2E-32;score=109.2;query 2-55;description=DUF2559; hypothetical protein complement(3644045..3644212) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762488 YP_005234480.1 CDS STMMW_34631 NC_016854.1 3644321 3644893 R pfam_scan;Pfam:PF00160; E()=1.9E-49;score=167.1;query 32-188;description=Pro_isomerase; peptidyl-prolyl cis-trans isomerase complement(3644321..3644893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762489 YP_005234481.1 CDS STMMW_34641 NC_016854.1 3645170 3646351 D pfam_scan;Pfam:PF07690; E()=3.5E-23;score=82.1;query14-322;description=MFS_1; tmhmm; query 1-394; hypothetical protein 3645170..3646351 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762490 YP_005234482.1 CDS STMMW_34651 NC_016854.1 3646614 3649157 D pfam_scan;Pfam:PF03460; E()=2.2E-10;score=39.4;query560- 622;description=NIR_SIR_ferr; pfam_scan;Pfam:PF07992; E()=2.2E-48;score=164.8;query 6-286;description=Pyr_redox_2; pfam_scan;Pfam:PF01077; E()=1.1E-34;score=118.8;query 632-771;description=NIR_SIR; pfam_scan;Pfam:PF00070; E()=5.4E-20;score=71.3;query149-242;description=Pyr_redox; pfam_scan;Pfam:PF04324; E()=1.7E-16;score=59.2;query423-473;description=Fer2_BFD; nitrite reductase large subunit 3646614..3649157 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762491 YP_005234483.1 CDS STMMW_34661 NC_016854.1 3649154 3649480 D nitrite reductase (NAD(P)H) small subunit 3649154..3649480 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762492 YP_005234484.1 CDS STMMW_34671 NC_016854.1 3649746 3650555 D pfam_scan;Pfam:PF01226; E()=7.0E-64;score=214.8;query 20-248;description=Form_Nir_trans; tmhmm; query 1-270; putative nitrite transporter 3649746..3650555 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762493 YP_005234485.1 CDS STMMW_34681 NC_016854.1 3650567 3651940 D pfam_scan;Pfam:PF00590; E()=8.9E-47;score=158.9;query 218-426;description=TP_methylase; pfam_scan;Pfam:PF10414; E()=4.3E-17;score=60.8;query149- 208;description=CysG_dimeriser; siroheme synthase 3650567..3651940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762494 YP_005234486.1 CDS STMMW_34691 NC_016854.1 3652269 3658097 D Signal peptide; signalp; query 1-28;cleavage_site_probability=0.960; 0.987; putative surface-exposed virulence protein BigA 3652269..3658097 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762495 YP_005234487.1 CDS STMMW_34701 NC_016854.1 3658229 3658687 R pfam_scan;Pfam:PF01797; E()=6.0E-40;score=135.3;query 12-129;description=Transposase_17; transposase for insertion sequence element IS200 complement(3658229..3658687) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762496 YP_005234488.1 CDS STMMW_34702 NC_016854.1 3658644 3658826 R hypothetical protein complement(3658644..3658826) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762497 YP_005234489.1 CDS STMMW_34711 NC_016854.1 3659316 3660320 R pfam_scan;Pfam:PF00579; E()=3.7E-88;score=295.3;query 3-285;description=tRNA-synt_1b; tryptophanyl-tRNA synthetase complement(3659316..3660320) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762498 YP_005234490.1 CDS STMMW_34721 NC_016854.1 3660313 3661071 R pfam_scan;Pfam:PF00702; E()=2.3E-42;score=145.0;query 7-212;description=Hydrolase; phosphoglycolate phosphatase complement(3660313..3661071) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762499 YP_005234491.1 CDS STMMW_34731 NC_016854.1 3661064 3661741 R pfam_scan;Pfam:PF00834; E()=1.3E-93;score=311.4;query 6-205;description=Ribul_P_3_epim; ribulose-phosphate 3-epimerase complement(3661064..3661741) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762500 YP_005234492.1 CDS STMMW_34741 NC_016854.1 3661759 3662595 R pfam_scan;Pfam:PF02086; E()=9.6E-81;score=270.7;query 10-251;description=MethyltransfD12; DNA adenine methylase complement(3661759..3662595) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762501 YP_005234493.1 CDS STMMW_34751 NC_016854.1 3662776 3664053 R pfam_scan;Pfam:PF05036; E()=2.3E-12;score=46.4;query342-414;description=SPOR; tmhmm; query 1-426; DamX protein complement(3662776..3664053) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762502 YP_005234494.1 CDS STMMW_34761 NC_016854.1 3664151 3665239 R pfam_scan;Pfam:PF01761; E()=2.8E-126;score=420.2;query 17-325;description=DHQ_synthase; 3-dehydroquinate synthase complement(3664151..3665239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762503 YP_005234495.1 CDS STMMW_34771 NC_016854.1 3665296 3665817 R pfam_scan;Pfam:PF01202; E()=1.4E-59;score=200.2;query 13-170;description=SKI; shikimate kinase I complement(3665296..3665817) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762504 YP_005234496.1 CDS STMMW_34781 NC_016854.1 3666282 3667520 R pfam_scan;Pfam:PF07660; E()=1.6E-4;score=21.1;query 47-88;description=STN; pfam_scan;Pfam:PF03958; E()=3.6E-13;score=49.1;query120- 180;description=Secretin_N; pfam_scan;Pfam:PF00263; E()=1.6E-64;score=217.4;query 183-409;description=Secretin; type II secretion system protein complement(3666282..3667520) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762505 YP_005234497.1 CDS STMMW_34791 NC_016854.1 3667435 3667836 R pfam_scan;Pfam:PF10748; E()=5.8E-64;score=213.1;query 3-133;description=DUF2531; hypothetical protein complement(3667435..3667836) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762506 YP_005234498.1 CDS STMMW_34801 NC_016854.1 3667826 3668299 R tmhmm; query 1-158; hypothetical protein complement(3667826..3668299) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762507 YP_005234499.1 CDS STMMW_34811 NC_016854.1 3668283 3668822 R pfam_scan;Pfam:PF05137; E()=2.2E-19;score=69.0;query5-162;description=PilN; tmhmm; query 1-180; hypothetical protein complement(3668283..3668822) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762508 YP_005234500.1 CDS STMMW_34821 NC_016854.1 3668822 3669601 R hypothetical protein complement(3668822..3669601) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762509 YP_005234501.1 CDS STMMW_34831 NC_016854.1 3669698 3672274 D pfam_scan;Pfam:PF00905; E()=1.1E-26;score=93.1;query437- 611;description=Transpeptidase; pfam_scan;Pfam:PF00912; E()=9.2E-71;score=236.2;query 62-237;description=Transgly; tmhmm; query 1-859; penicillin-binding protein 1A 3669698..3672274 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762510 YP_005234502.1 CDS STMMW_34841 NC_016854.1 3672370 3672966 R pfam_scan;Pfam:PF00293; E()=1.3E-13;score=50.5;query58-185;description=NUDIX; putative NUDIX hydrolase complement(3672370..3672966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762511 YP_005234503.1 CDS STMMW_34851 NC_016854.1 3673391 3675388 D pfam_scan;Pfam:PF07095; E()=0.0;score=1149.1;query 2-660;description=IgaA; tmhmm; query 1-666; hypothetical protein 3673391..3675388 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762512 YP_005234504.1 CDS STMMW_34861 NC_016854.1 3675453 3676121 D pfam_scan;Pfam:PF00702; E()=1.1E-22;score=80.7;query10-193;description=Hydrolase; putative hydrolase 3675453..3676121 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762513 YP_005234505.1 CDS STMMW_34871 NC_016854.1 3676132 3676533 D pfam_scan;Pfam:PF01479; E()=9.2E-12;score=43.9;query9-53;description=S4; heat shock protein 3676132..3676533 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762514 YP_005234506.1 CDS STMMW_34881 NC_016854.1 3676552 3677436 D pfam_scan;Pfam:PF01430; E()=6.6E-99;score=330.5;query 6-275;description=HSP33; heat shock protein 3676552..3677436 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762515 YP_005234507.1 CDS STMMW_34891 NC_016854.1 3677546 3679255 R tmhmm; query 1-570; hypothetical protein complement(3677546..3679255) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762516 YP_005234508.1 CDS STMMW_34901 NC_016854.1 3679635 3681254 D pfam_scan;Pfam:PF01293; E()=4.9E-219;score=727.2;query 19-492;description=PEPCK_ATP; phosphoenolpyruvate carboxykinase 3679635..3681254 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762517 YP_005234509.1 CDS STMMW_34911 NC_016854.1 3681329 3682564 R pfam_scan;Pfam:PF02518; E()=2.2E-27;score=94.6;query295-399;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=9.8E-12;score=44.2;query195-251;description=HisKA; tmhmm; query 1-412; two-component sensor kinase EnvZ complement(3681329..3682564) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762518 YP_005234510.1 CDS STMMW_34921 NC_016854.1 3682678 3683397 R pfam_scan;Pfam:PF00486; E()=6.6E-22;score=76.3;query157- 232;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=4.1E-32;score=110.2;query 7-117;description=Response_reg; two-component response regulator OmpR complement(3682678..3683397) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762519 YP_005234511.1 CDS STMMW_34931 NC_016854.1 3683623 3684096 D pfam_scan;Pfam:PF01272; E()=3.0E-22;score=77.9;query81-155;description=GreA_GreB; pfam_scan;Pfam:PF03449; E()=1.9E-28;score=97.7;query1-74;description=GreA_GreB_N; transcription elongation factor GreB 3683623..3684096 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762520 YP_005234512.1 CDS STMMW_34941 NC_016854.1 3684198 3686525 D pfam_scan;Pfam:PF09371; E()=9.2E-81;score=269.8;query 9-200;description=Tex_N; pfam_scan;Pfam:PF00575; E()=4.1E-23;score=80.8;query649-719;description=S1; putative transcription accessory protein 3684198..3686525 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762521 YP_005234513.1 CDS STMMW_34951 NC_016854.1 3686962 3687189 D pfam_scan;Pfam:PF04023; E()=1.4E-13;score=50.6;query5-71;description=FeoA; putative ferrous iron transport protein 3686962..3687189 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762522 YP_005234514.1 CDS STMMW_34961 NC_016854.1 3687208 3689526 D pfam_scan;Pfam:PF07664; E()=5.2E-22;score=76.9;query454-507;description=FeoB_C; pfam_scan;Pfam:PF01926; E()=4.3E-23;score=81.3;query5-123;description=MMR_HSR1; pfam_scan;Pfam:PF07670; E()=7.4E-24;score=83.8;query351-445;description=Gate; pfam_scan;Pfam:PF02421; E()=1.6E-71;score=239.5;query 5-186;description=FeoB_N; ferrous iron transport protein B 3687208..3689526 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762523 YP_005234515.1 CDS STMMW_34971 NC_016854.1 3689539 3689775 D pfam_scan;Pfam:PF09012; E()=2.7E-13;score=48.7;query3-69;description=FeoC; hypothetical protein 3689539..3689775 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762524 YP_005234516.1 CDS STMMW_34981 NC_016854.1 3690010 3690924 D pfam_scan;Pfam:PF04754; E()=1.2E-118;score=394.3;query 8-254;description=Transposase_31; hypothetical protein 3690010..3690924 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762525 YP_005234517.1 CDS STMMW_34991 NC_016854.1 3690960 3691730 R pfam_scan;Pfam:PF00561; E()=6.4E-33;score=113.7;query 40-249;description=Abhydrolase_1; putative biotin biosynthesis protein complement(3690960..3691730) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762526 YP_005234518.1 CDS STMMW_35001 NC_016854.1 3691768 3692451 D pfam_scan;Pfam:PF00156; E()=4.6E-9;score=35.7;query 141-224;description=Pribosyltran; putative competence protein 3691768..3692451 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762527 YP_005234519.1 CDS STMMW_35011 NC_016854.1 3692510 3693085 D pfam_scan;Pfam:PF01106; E()=4.1E-10;score=38.9;query114-177;description=NifU; pfam_scan;Pfam:PF01521; E()=3.7E-21;score=74.7;query2-94;description=Fe-S_biosyn; hypothetical protein 3692510..3693085 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762528 YP_005234520.1 CDS STMMW_35021 NC_016854.1 3693510 3694778 D pfam_scan;Pfam:PF02447; E()=7.8E-183;score=607.8;query 1-421;description=GntP_permease; tmhmm; query 1-423; high-affinity gluconate transporter 3693510..3694778 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762529 YP_005234521.1 CDS STMMW_35031 NC_016854.1 3694897 3696975 R pfam_scan;Pfam:PF02446; E()=2.1E-151;score=504.4;query 146-681;description=Glyco_hydro_77; 4-alpha-glucanotransferase complement(3694897..3696975) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762530 YP_005234522.1 CDS STMMW_35041 NC_016854.1 3696985 3699378 R pfam_scan;Pfam:PF00343; E()=0.0;score=1132.0;query 92-796;description=Phosphorylase; maltodextrin phosphorylase complement(3696985..3699378) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762531 YP_005234523.1 CDS STMMW_35051 NC_016854.1 3699972 3702677 D pfam_scan;Pfam:PF00196; E()=1.5E-18;score=65.6;query834-890;description=GerE; MalT regulatory protein 3699972..3702677 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762532 YP_005234524.1 CDS STMMW_35061 NC_016854.1 3702765 3703040 R pfam_scan;Pfam:PF05016; E()=2.8E-5;score=24.6;query 6-83;description=Plasmid_stabil; hypothetical protein complement(3702765..3703040) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762533 YP_005234525.1 CDS STMMW_35071 NC_016854.1 3703043 3703303 R pfam_scan;Pfam:PF04221; E()=9.7E-28;score=95.6;query4-84;description=RelB; hypothetical protein complement(3703043..3703303) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762534 YP_005234526.1 CDS STMMW_35081 NC_016854.1 3703412 3704431 R pfam_scan;Pfam:PF01137; E()=2.5E-85;score=284.6;query 7-327;description=RTC; pfam_scan;Pfam:PF05189; E()=4.2E-16;score=58.4;query184- 276;description=RTC_insert; rna 3'-terminal phosphate cyclase complement(3703412..3704431) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762535 YP_005234527.1 CDS STMMW_35091 NC_016854.1 3704435 3705652 R pfam_scan;Pfam:PF01139; E()=1.9E-135;score=451.3;query 11-405;description=UPF0027; hypothetical protein complement(3704435..3705652) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762536 YP_005234528.1 CDS STMMW_35101 NC_016854.1 3705997 3707550 R pfam_scan;Pfam:PF05731; E()=1.8E-90;score=302.9;query 20-325;description=TROVE; hypothetical protein complement(3705997..3707550) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762537 YP_005234529.1 CDS STMMW_35111 NC_016854.1 3707740 3709323 D pfam_scan;Pfam:PF00158; E()=2.5E-49;score=166.9;query 187-355;description=Sigma54_activat; pfam_scan;Pfam:PF06956; E()=7.7E-86;score=285.7;query 1-185;description=RtcR; transcriptional regulator 3707740..3709323 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762538 YP_005234530.1 CDS STMMW_35121 NC_016854.1 3709320 3710078 R pfam_scan;Pfam:PF00455; E()=1.4E-58;score=196.6;query 75-231;description=DeoR; pfam_scan;Pfam:PF08220; E()=4.4E-24;score=83.1;query6-61;description=HTH_DeoR; glycerol-3-phosphate regulon repressor complement(3709320..3710078) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762539 YP_005234531.1 CDS STMMW_35131 NC_016854.1 3710172 3711002 R pfam_scan;Pfam:PF01694; E()=1.5E-31;score=108.7;query 130-268;description=Rhomboid; tmhmm; query 1-277; hypothetical protein complement(3710172..3711002) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762540 YP_005234532.1 CDS STMMW_35141 NC_016854.1 3711078 3711404 R pfam_scan;Pfam:PF00581; E()=2.7E-19;score=68.7;query8-98;description=Rhodanese; hypothetical protein complement(3711078..3711404) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762541 YP_005234533.1 CDS STMMW_35151 NC_016854.1 3711603 3713111 D pfam_scan;Pfam:PF01266; E()=8.0E-51;score=173.1;query 5-358;description=DAO; aerobic glycerol-3-phosphate dehydrogenase 3711603..3713111 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762542 YP_005234534.1 CDS STMMW_35161 NC_016854.1 3713158 3713703 R hypothetical protein complement(3713158..3713703) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762543 YP_005234535.1 CDS STMMW_35171 NC_016854.1 3713713 3715272 R tmhmm; query 1-520; hypothetical protein complement(3713713..3715272) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762544 YP_005234536.1 CDS STMMW_35181 NC_016854.1 3715366 3716475 R pfam_scan;Pfam:PF00465; E()=2.5E-57;score=193.9;query 8-347;description=Fe-ADH; putative glycerol dehydrogenase complement(3715366..3716475) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762545 YP_005234537.1 CDS STMMW_35191 NC_016854.1 3716813 3718147 D pfam_scan;Pfam:PF07690; E()=4.5E-56;score=190.3;query 23-381;description=MFS_1; tmhmm; query 1-445; putative MFS family membrane transport protein 3716813..3718147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762546 YP_005234538.1 CDS STMMW_35201 NC_016854.1 3718144 3719859 D pfam_scan;Pfam:PF00920; E()=1.8E-177;score=590.3;query 33-568;description=ILVD_EDD; putative dehydratase 3718144..3719859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762547 YP_005234539.1 CDS STMMW_35211 NC_016854.1 3719903 3720808 D pfam_scan;Pfam:PF00701; E()=5.0E-71;score=238.5;query 6-299;description=DHDPS; dihydrodipicolinate synthase 3719903..3720808 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762548 YP_005234540.1 CDS STMMW_35221 NC_016854.1 3720852 3721607 R pfam_scan;Pfam:PF01614; E()=3.4E-35;score=120.4;query 123-248;description=IclR; pfam_scan;Pfam:PF09339; E()=1.2E-10;score=40.7;query10-59;description=HTH_IclR; putative IclR family transcriptional regulator complement(3720852..3721607) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762549 YP_005234541.1 CDS STMMW_35231 NC_016854.1 3721785 3724232 R pfam_scan;Pfam:PF00343; E()=0.0;score=1216.7;query 101-812;description=Phosphorylase; glycogen phosphorylase complement(3721785..3724232) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762550 YP_005234542.1 CDS STMMW_35241 NC_016854.1 3724252 3725685 R pfam_scan;Pfam:PF08323; E()=1.2E-79;score=266.6;query 2-234;description=Glyco_transf_5; pfam_scan;Pfam:PF00534; E()=1.9E-14;score=53.2;query288- 438;description=Glycos_transf_1; glycogen synthase complement(3724252..3725685) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762551 YP_005234543.1 CDS STMMW_35251 NC_016854.1 3725685 3726980 R pfam_scan;Pfam:PF00483; E()=1.6E-65;score=220.5;query 22-291;description=NTP_transferase; glucose-1-phosphate adenylyltransferase complement(3725685..3726980) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762552 YP_005234544.1 CDS STMMW_35261 NC_016854.1 3726995 3728971 R pfam_scan;Pfam:PF00128; E()=3.4E-23;score=81.5;query186-548;description=Alpha- amylase; pfam_scan;Pfam:PF02922; E()=5.5E-18;score=64.2;query12-97;description=CBM_48; hypothetical protein complement(3726995..3728971) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762553 YP_005234545.1 CDS STMMW_35271 NC_016854.1 3728968 3731154 R pfam_scan;Pfam:PF00128; E()=4.6E-17;score=61.3;query259-438;description=Alpha- amylase; pfam_scan;Pfam:PF02806; E()=2.4E-24;score=85.2;query628-723;description=Alpha- amylase_C; pfam_scan;Pfam:PF02922; E()=3.8E-27;score=93.4;query125-207;description=CBM_48; 1,4-alpha-glucan-branching protein complement(3728968..3731154) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762554 YP_005234546.1 CDS STMMW_35281 NC_016854.1 3731501 3732607 R pfam_scan;Pfam:PF01118; E()=1.6E-22;score=79.9;query3- 121;description=Semialdhyde_dh; pfam_scan;Pfam:PF02774; E()=3.3E-43;score=147.1;query 145-354;description=Semialdhyde_dhC; aspartate-semialdehyde dehydrogenase complement(3731501..3732607) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762555 YP_005234547.1 CDS STMMW_35301 NC_016854.1 3733031 3734371 R pfam_scan;Pfam:PF02447; E()=1.1E-166;score=554.6;query 5-441;description=GntP_permease; tmhmm; query 1-447; low-affinity gluconate transporter complement(3733031..3734371) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762556 YP_005234548.1 CDS STMMW_35311 NC_016854.1 3734368 3734901 R pfam_scan;Pfam:PF01202; E()=6.5E-8;score=32.4;query 18-169;description=SKI; putative gluconokinase complement(3734368..3734901) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762557 YP_005234549.1 CDS STMMW_35321 NC_016854.1 3735040 3736035 R pfam_scan;Pfam:PF00356; E()=1.1E-15;score=57.0;query8-52;description=LacI; pfam_scan;Pfam:PF00532; E()=1.2E-33;score=116.1;query 64-311;description=Peripla_BP_1; gluconate utilization operon repressor complement(3735040..3736035) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762558 YP_005234550.1 CDS STMMW_35331 NC_016854.1 3736165 3736860 R pfam_scan;Pfam:PF02678; E()=4.1E-36;score=122.7;query 8-119;description=Pirin; hypothetical protein complement(3736165..3736860) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762559 YP_005234551.1 CDS STMMW_35341 NC_016854.1 3736984 3738021 R pfam_scan;Pfam:PF02894; E()=4.0E-17;score=61.7;query135- 238;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=8.9E-29;score=99.7;query3- 120;description=GFO_IDH_MocA; putative oxidoreductase complement(3736984..3738021) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762560 YP_005234552.1 CDS STMMW_35351 NC_016854.1 3738489 3738977 D pfam_scan;Pfam:PF00583; E()=2.7E-16;score=58.9;query57- 137;description=Acetyltransf_1; putative acetyltransferase 3738489..3738977 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762561 YP_005234553.1 CDS STMMW_35361 NC_016854.1 3739243 3740457 D pfam_scan;Pfam:PF00294; E()=2.2E-70;score=236.9;query 92-383;description=PfkB; pfam_scan;Pfam:PF08220; E()=2.0E-14;score=52.3;query5-55;description=HTH_DeoR; putative kinase/transcriptional regulatory protein 3739243..3740457 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762562 YP_005234554.1 CDS STMMW_35371 NC_016854.1 3740473 3741234 D pfam_scan;Pfam:PF07090; E()=3.4E-79;score=264.2;query 9-188;description=DUF1355; hypothetical protein 3740473..3741234 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762563 YP_005234555.1 CDS STMMW_35381 NC_016854.1 3741288 3742259 D pfam_scan;Pfam:PF04657; E()=1.3E-26;score=93.0;query10-154;description=DUF606; tmhmm; query 1-324; hypothetical protein 3741288..3742259 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762564 YP_005234556.1 CDS STMMW_35391 NC_016854.1 3742256 3743290 D pfam_scan;Pfam:PF02126; E()=1.3E-50;score=171.6;query 14-343;description=PTE; phophotriesterase 3742256..3743290 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762565 YP_005234557.1 CDS STMMW_35401 NC_016854.1 3743335 3745077 R pfam_scan;Pfam:PF01019; E()=1.5E-196;score=653.9;query 64-572;description=G_glu_transpept; gamma-glutamyltranspeptidase complement(3743335..3745077) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762566 YP_005234558.1 CDS STMMW_35411 NC_016854.1 3745203 3745619 D pfam_scan;Pfam:PF10956; E()=2.4E-52;score=174.8;query 1-104;description=DUF2756; hypothetical protein 3745203..3745619 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762567 YP_005234559.1 CDS STMMW_35421 NC_016854.1 3745632 3746372 R pfam_scan;Pfam:PF03009; E()=6.3E-56;score=189.8;query 12-238;description=GDPD; glycerophosphoryl diester phosphodiesterase complement(3745632..3746372) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762568 YP_005234560.1 CDS STMMW_35431 NC_016854.1 3746369 3747439 R pfam_scan;Pfam:PF08402; E()=1.1E-10;score=41.3;query278-348;description=TOBE_2; pfam_scan;Pfam:PF00005; E()=4.7E-44;score=150.5;query 30-195;description=ABC_tran; sn-glycerol-3-phosphate transport ATP-binding protein complement(3746369..3747439) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762569 YP_005234561.1 CDS STMMW_35441 NC_016854.1 3747441 3748286 R pfam_scan;Pfam:PF00528; E()=1.1E-20;score=73.5;query92- 276;description=BPD_transp_1; tmhmm; query 1-282; sn-glycerol-3-phosphate transport system permease protein complement(3747441..3748286) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762570 YP_005234562.1 CDS STMMW_35451 NC_016854.1 3748283 3749170 R pfam_scan;Pfam:PF00528; E()=7.0E-16;score=57.8;query92- 293;description=BPD_transp_1; tmhmm; query 1-296; glycerol-3-phosphate transport system permease protein complement(3748283..3749170) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762571 YP_005234563.1 CDS STMMW_35461 NC_016854.1 3749234 3750550 R pfam_scan;Pfam:PF01547; E()=6.1E-37;score=127.5;query 38-337;description=SBP_bac_1; tmhmm; query 1-439; glycerol-3-phosphate-binding periplasmic protein complement(3749234..3750550) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762572 YP_005234564.1 CDS STMMW_35471 NC_016854.1 3750809 3751177 R pfam_scan;Pfam:PF02661; E()=5.3E-10;score=39.6;query7-86;description=Fic; death on curing protein complement(3750809..3751177) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762573 YP_005234565.1 CDS STMMW_35481 NC_016854.1 3751174 3751401 R pfam_scan;Pfam:PF02604; E()=1.5E-19;score=69.1;query3-63;description=PhdYeFM; prevent host death protein complement(3751174..3751401) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762574 YP_005234566.1 CDS STMMW_35491 NC_016854.1 3751527 3752240 R pfam_scan;Pfam:PF00005; E()=1.1E-41;score=142.7;query 31-198;description=ABC_tran; high-affinity branched-chain amino acid transport ATP-binding protein complement(3751527..3752240) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762575 YP_005234567.1 CDS STMMW_35501 NC_016854.1 3752242 3753009 R pfam_scan;Pfam:PF00005; E()=2.2E-46;score=158.1;query 32-215;description=ABC_tran; high-affinity branched-chain amino acid transport ATP-binding protein complement(3752242..3753009) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762576 YP_005234568.1 CDS STMMW_35511 NC_016854.1 3753006 3754283 R pfam_scan;Pfam:PF02653; E()=2.1E-54;score=184.3;query 113-398;description=BPD_transp_2; tmhmm; query 1-426; high-affinity branched-chain amino acid transport system permease complement(3753006..3754283) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762577 YP_005234569.1 CDS STMMW_35521 NC_016854.1 3754280 3755206 R pfam_scan;Pfam:PF02653; E()=4.0E-54;score=183.4;query 12-292;description=BPD_transp_2; tmhmm; query 1-309; high-affinity branched-chain amino acid transport system permease complement(3754280..3755206) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762578 YP_005234570.1 CDS STMMW_35531 NC_016854.1 3755266 3756375 R pfam_scan;Pfam:PF01094; E()=8.1E-58;score=195.6;query 46-359;description=ANF_receptor; leucine-specific binding protein complement(3755266..3756375) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762579 YP_005234571.1 CDS STMMW_35541 NC_016854.1 3756797 3757180 D pfam_scan;Pfam:PF00583; E()=8.1E-5;score=22.3;query 43-118;description=Acetyltransf_1; hypothetical protein 3756797..3757180 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762580 YP_005234572.1 CDS STMMW_35551 NC_016854.1 3757158 3757292 D hypothetical protein 3757158..3757292 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762581 YP_005234573.1 CDS STMMW_35561 NC_016854.1 3757375 3758472 R pfam_scan;Pfam:PF01094; E()=2.5E-56;score=190.7;query 43-355;description=ANF_receptor; leu/ile/val/thr-binding protein complement(3757375..3758472) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762582 YP_005234574.1 CDS STMMW_35571 NC_016854.1 3758800 3759654 R pfam_scan;Pfam:PF04545; E()=2.9E-16;score=58.6;query228- 280;description=Sigma70_r4; pfam_scan;Pfam:PF04542; E()=2.1E-17;score=62.3;query53-122;description=Sigma70_r2; RNA polymerase sigma-32 factor complement(3758800..3759654) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762583 YP_005234575.1 CDS STMMW_35581 NC_016854.1 3759900 3760955 R pfam_scan;Pfam:PF02687; E()=2.0E-18;score=65.9;query175-340;description=FtsX; tmhmm; query 1-352; cell division protein complement(3759900..3760955) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762584 YP_005234576.1 CDS STMMW_35591 NC_016854.1 3760948 3761616 R pfam_scan;Pfam:PF00005; E()=1.9E-52;score=177.9;query 28-197;description=ABC_tran; cell division ATP-binding protein FtsE complement(3760948..3761616) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762585 YP_005234577.1 CDS STMMW_35601 NC_016854.1 3761619 3763094 R pfam_scan;Pfam:PF02881; E()=3.9E-21;score=74.8;query193-273;description=SRP54_N; pfam_scan;Pfam:PF00448; E()=2.9E-81;score=271.4;query 287-487;description=SRP54; cell division protein complement(3761619..3763094) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762586 YP_005234578.1 CDS STMMW_35611 NC_016854.1 3763220 3763816 D pfam_scan;Pfam:PF03602; E()=1.0E-62;score=210.7;query 12-188;description=Cons_hypoth95; hypothetical protein 3763220..3763816 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762587 YP_005234579.1 CDS STMMW_35621 NC_016854.1 3763803 3764075 D pfam_scan;Pfam:PF06611; E()=6.9E-23;score=79.5;query2-59;description=DUF1145; tmhmm; query 1-91; hypothetical protein 3763803..3764075 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762588 YP_005234580.1 CDS STMMW_35631 NC_016854.1 3764097 3764468 R pfam_scan;Pfam:PF10694; E()=3.5E-39;score=132.6;query 5-116;description=DUF2500; tmhmm; query 1-124; putative inner membrane protein complement(3764097..3764468) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762589 YP_005234581.1 CDS STMMW_35641 NC_016854.1 3764610 3765236 D pfam_scan;Pfam:PF07947; E()=6.0E-41;score=139.5;query 25-206;description=YhhN; tmhmm; query 1-209; hypothetical protein 3764610..3765236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762590 YP_005234582.1 CDS STMMW_35651 NC_016854.1 3765317 3767515 D pfam_scan;Pfam:PF00403; E()=1.5E-14;score=53.3;query53-110;description=HMA; pfam_scan;Pfam:PF00702; E()=4.3E-31;score=108.2;query 433-649;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=5.1E-61;score=205.5;query 205-426;description=E1-E2_ATPase; tmhmm; query 1-733; heavy metal-transporting ATPase 3765317..3767515 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762591 YP_005234583.1 CDS STMMW_35661 NC_016854.1 3767715 3769358 D pfam_scan;Pfam:PF00672; E()=4.1E-16;score=58.2;query195-262;description=HAMP; pfam_scan;Pfam:PF02203; E()=1.2E-31;score=109.1;query 44-177;description=TarH; pfam_scan;Pfam:PF00015; E()=8.8E-73;score=244.1;query 323-517;description=MCPsignal; tmhmm; query 1-548; methyl-accepting chemotaxis citrate transducer 3767715..3769358 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762592 YP_005234584.1 CDS STMMW_35671 NC_016854.1 3769382 3769627 R pfam_scan;Pfam:PF01206; E()=2.8E-22;score=77.7;query10-79;description=SirA; hypothetical protein complement(3769382..3769627) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762593 YP_005234585.1 CDS STMMW_35681 NC_016854.1 3769797 3770462 D pfam_scan;Pfam:PF02592; E()=4.8E-35;score=120.5;query 43-186;description=DUF165; tmhmm; query 1-222; hypothetical protein 3769797..3770462 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762594 YP_005234586.1 CDS STMMW_35691 NC_016854.1 3770535 3771092 D pfam_scan;Pfam:PF08786; E()=3.7E-5;score=23.0;query 50-182;description=DUF1795; putative lipoprotein 3770535..3771092 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762595 YP_005234587.1 CDS STMMW_35701 NC_016854.1 3771096 3772349 R pfam_scan;Pfam:PF07690; E()=1.0E-16;score=60.8;query39-291;description=MFS_1; tmhmm; query 1-418; hypothetical protein complement(3771096..3772349) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762596 YP_005234588.1 CDS STMMW_35711 NC_016854.1 3772439 3773488 D pfam_scan;Pfam:PF01594; E()=1.1E-77;score=260.8;query 14-328;description=UPF0118; tmhmm; query 1-350; hypothetical protein 3772439..3773488 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762597 YP_005234589.1 CDS STMMW_35721 NC_016854.1 3773540 3774118 D pfam_scan;Pfam:PF01648; E()=2.7E-13;score=49.4;query88-146;description=ACPS; hypothetical protein 3773540..3774118 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762598 YP_005234590.1 CDS STMMW_35731 NC_016854.1 3774210 3774611 D pfam_scan;Pfam:PF08753; E()=6.3E-30;score=102.2;query 54-130;description=NikR_C; pfam_scan;Pfam:PF01402; E()=1.1E-10;score=40.5;query3-42;description=RHH_1; nickel responsive regulator 3774210..3774611 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762599 YP_005234591.1 CDS STMMW_35741 NC_016854.1 3774701 3775825 R pfam_scan;Pfam:PF01061; E()=4.1E-24;score=84.8;query126- 336;description=ABC2_membrane; tmhmm; query 1-375; putative ABC-2 type superfamily transport protein complement(3774701..3775825) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762600 YP_005234592.1 CDS STMMW_35751 NC_016854.1 3775825 3778515 R pfam_scan;Pfam:PF00005; E()=1.1E-36;score=126.4;query 23-187;description=ABC_tran; pfam_scan;Pfam:PF01061; E()=3.4E-18;score=65.5;query707- 859;description=ABC2_membrane; tmhmm; query 1-897; ABC transporter ATP-binding protein complement(3775825..3778515) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762601 YP_005234593.1 CDS STMMW_35761 NC_016854.1 3778563 3779630 R pfam_scan;Pfam:PF00529; E()=2.0E-36;score=125.7;query 47-337;description=HlyD; tmhmm; query 1-356; putative HlyD family secretion protein complement(3778563..3779630) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762602 YP_005234594.1 CDS STMMW_35771 NC_016854.1 3779936 3781132 R pfam_scan;Pfam:PF03486; E()=3.9E-160;score=532.7;query 5-392;description=HI0933_like; hypothetical protein complement(3779936..3781132) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762603 YP_005234595.1 CDS STMMW_35781 NC_016854.1 3781486 3782859 D pfam_scan;Pfam:PF01384; E()=7.9E-80;score=268.0;query 1-446;description=PHO4; tmhmm; query 1-458; putative low-affinity inorganic phosphate transporter 3781486..3782859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762604 YP_005234596.1 CDS STMMW_35791 NC_016854.1 3782999 3783334 R pfam_scan;Pfam:PF10625; E()=1.5E-51;score=172.2;query 1-107;description=UspB; tmhmm; query 1-112; universal stress protein B complement(3782999..3783334) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762605 YP_005234597.1 CDS STMMW_35801 NC_016854.1 3783722 3784156 D pfam_scan;Pfam:PF00582; E()=1.3E-22;score=80.6;query3-138;description=Usp; universal stress protein A 3783722..3784156 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762606 YP_005234598.1 CDS STMMW_35811 NC_016854.1 3784481 3785953 D pfam_scan;Pfam:PF00854; E()=2.1E-86;score=290.2;query 82-427;description=PTR2; tmhmm; query 1-491; putative PTR2 family transport protein 3784481..3785953 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762607 YP_005234599.1 CDS STMMW_35821 NC_016854.1 3786045 3786803 R pfam_scan;Pfam:PF04445; E()=3.3E-117;score=389.2;query 16-247;description=DUF548; hypothetical protein complement(3786045..3786803) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762608 YP_005234600.1 CDS STMMW_35831 NC_016854.1 3786810 3788852 R pfam_scan;Pfam:PF01432; E()=2.3E-176;score=586.5;query 222-677;description=Peptidase_M3; oligopeptidase A complement(3786810..3788852) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762609 YP_005234601.1 CDS STMMW_35841 NC_016854.1 3789034 3790275 R pfam_scan;Pfam:PF01569; E()=2.6E-15;score=55.9;query168-273;description=PAP2; putative phosphatase complement(3789034..3790275) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762610 YP_005234602.1 CDS STMMW_35851 NC_016854.1 3790531 3791373 D pfam_scan;Pfam:PF04378; E()=1.0E-114;score=381.3;query 33-278;description=DUF519; hypothetical protein 3790531..3791373 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762611 YP_005234603.1 CDS STMMW_35861 NC_016854.1 3791478 3792830 D pfam_scan;Pfam:PF07992; E()=2.1E-61;score=207.5;query 6-305;description=Pyr_redox_2; pfam_scan;Pfam:PF02852; E()=3.5E-36;score=123.0;query 339-449;description=Pyr_redox_dim; pfam_scan;Pfam:PF00070; E()=1.7E-20;score=72.9;query169-262;description=Pyr_redox; glutathione reductase 3791478..3792830 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762612 YP_005234604.1 CDS STMMW_35871 NC_016854.1 3792877 3793920 R pfam_scan;Pfam:PF00710; E()=6.7E-94;score=314.1;query 26-340;description=Asparaginase; tmhmm; query 1-348; L-asparginase complement(3792877..3793920) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762613 YP_005234605.1 CDS STMMW_35881 NC_016854.1 3793979 3795298 R pfam_scan;Pfam:PF03605; E()=5.4E-136;score=453.0;query 5-369;description=DcuA_DcuB; tmhmm; query 1-440; anaerobic C4 dicarboxylate membrane transport protein complement(3793979..3795298) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762614 YP_005234606.1 CDS STMMW_35891 NC_016854.1 3795352 3796197 R pfam_scan;Pfam:PF00294; E()=6.4E-25;score=87.7;query20-272;description=PfkB; putative carbohydrate kinase complement(3795352..3796197) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762615 YP_005234607.1 CDS STMMW_35901 NC_016854.1 3796261 3797238 R pfam_scan;Pfam:PF01380; E()=8.2E-13;score=48.0;query22-118;description=SIS; putative phosphosugar-binding protein complement(3796261..3797238) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762616 YP_005234608.1 CDS STMMW_35911 NC_016854.1 3797414 3798133 R pfam_scan;Pfam:PF00392; E()=1.2E-20;score=72.7;query13-76;description=GntR; pfam_scan;Pfam:PF07702; E()=1.4E-31;score=108.9;query 97-236;description=UTRA; GntR family transcriptional regulator complement(3797414..3798133) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762617 YP_005234609.1 CDS STMMW_35921 NC_016854.1 3798459 3800108 D pfam_scan;Pfam:PF01204; E()=5.4E-167;score=556.2;query 70-546;description=Trehalase; cytoplasmic trehalase 3798459..3800108 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762618 YP_005234610.1 CDS STMMW_35931 NC_016854.1 3800121 3801710 R tmhmm; query 1-530; hypothetical protein complement(3800121..3801710) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762619 YP_005234611.1 CDS STMMW_35941 NC_016854.1 3801991 3802347 D phage-like lysozyme 3801991..3802347 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762620 YP_005234612.1 CDS STMMW_35951 NC_016854.1 3802353 3802955 R pfam_scan;Pfam:PF00196; E()=1.2E-20;score=72.2;query140-195;description=GerE; luxR family transcriptional regulator complement(3802353..3802955) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762621 YP_005234613.1 CDS STMMW_35961 NC_016854.1 3803586 3804485 D pfam_scan;Pfam:PF00126; E()=3.9E-19;score=67.9;query6-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.5E-39;score=132.8;query 89-293;description=LysR_substrate; lysR family transcriptional regulator 3803586..3804485 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762622 YP_005234614.1 CDS STMMW_35971 NC_016854.1 3804558 3805586 D pfam_scan;Pfam:PF03631; E()=1.1E-42;score=146.0;query 71-330;description=Ribonuclease_BN; tmhmm; query 1-343; hypothetical protein 3804558..3805586 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762623 YP_005234615.1 CDS STMMW_35981 NC_016854.1 3805937 3807259 D pfam_scan;Pfam:PF07690; E()=2.9E-13;score=49.5;query283-436;description=MFS_1; pfam_scan;Pfam:PF00083; E()=4.7E-26;score=90.9;query24-226;description=Sugar_tr; tmhmm; query 1-441; metabolite transport protein 3805937..3807259 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762624 YP_005234616.1 CDS STMMW_35991 NC_016854.1 3807299 3809359 R pfam_scan;Pfam:PF05170; E()=2.6E-158;score=527.7;query 1-582;description=AsmA; tmhmm; query 1-687; hypothetical protein complement(3807299..3809359) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762625 YP_005234617.1 CDS STMMW_36001 NC_016854.1 3809469 3810236 R pfam_scan;Pfam:PF00563; E()=4.8E-29;score=101.1;query 31-242;description=EAL; hypothetical protein complement(3809469..3810236) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762626 YP_005234618.1 CDS STMMW_36011 NC_016854.1 3810465 3811394 D pfam_scan;Pfam:PF00294; E()=1.5E-64;score=217.7;query 3-303;description=PfkB; 2-dehydro-3-deoxygluconokinase 3810465..3811394 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762627 YP_005234619.1 CDS STMMW_36021 NC_016854.1 3811448 3812935 R pfam_scan;Pfam:PF00675; E()=4.6E-5;score=22.4;query 50-158;description=Peptidase_M16; pfam_scan;Pfam:PF05193; E()=2.1E-22;score=79.2;query200- 377;description=Peptidase_M16_C; putative zinc-protease precursor complement(3811448..3812935) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762628 YP_005234620.1 CDS STMMW_36031 NC_016854.1 3813155 3814441 R pfam_scan;Pfam:PF00375; E()=2.5E-122;score=408.1;query 9-401;description=SDF; tmhmm; query 1-429; C4-dicarboxylate transport protein complement(3813155..3814441) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762629 YP_005234621.1 CDS STMMW_36041 NC_016854.1 3814599 3816518 R pfam_scan;Pfam:PF00563; E()=1.2E-64;score=217.6;query 385-619;description=EAL; pfam_scan;Pfam:PF00990; E()=1.4E-9;score=37.4;query 218-365;description=GGDEF; tmhmm; query 1-640; hypothetical protein complement(3814599..3816518) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762630 YP_005234622.1 CDS STMMW_36051 NC_016854.1 3816779 3820321 R pfam_scan;Pfam:PF05420; E()=4.6E-127;score=423.4;query 825-1162;description=BCSC_C; putative polysaccharide biosynthesis protein subunit C complement(3816779..3820321) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762631 YP_005234623.1 CDS STMMW_36061 NC_016854.1 3820303 3821412 R pfam_scan;Pfam:PF01270; E()=1.2E-104;score=349.2;query 8-347;description=Glyco_hydro_8; tmhmm; query 1-370; endoglucanase precursor complement(3820303..3821412) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762632 YP_005234624.1 CDS STMMW_36071 NC_016854.1 3821416 3823341 R pfam_scan;Pfam:PF03170; E()=1.8E-213;score=709.6;query 1-543;description=BcsB; tmhmm; query 1-642; putative polysaccharide biosynthesis protein subunit B complement(3821416..3823341) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762633 YP_005234625.1 CDS STMMW_36081 NC_016854.1 3823727 3826351 R pfam_scan;Pfam:PF07238; E()=3.5E-17;score=61.5;query694-790;description=PilZ; pfam_scan;Pfam:PF00535; E()=1.5E-20;score=72.9;query277- 447;description=Glycos_transf_2; tmhmm; query 1-875; putative polysaccharide biosynthesis protein catalytic subunit complement(3823727..3826351) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762634 YP_005234626.1 CDS STMMW_36091 NC_016854.1 3826348 3827100 R pfam_scan;Pfam:PF06564; E()=7.2E-127;score=421.2;query 1-241;description=YhjQ; hypothetical protein complement(3826348..3827100) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762635 YP_005234627.1 CDS STMMW_36101 NC_016854.1 3827101 3827304 R pfam_scan;Pfam:PF10945; E()=3.0E-26;score=89.6;query17-60;description=DUF2629; hypothetical protein complement(3827101..3827304) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762636 YP_005234628.1 CDS STMMW_36111 NC_016854.1 3827549 3829120 D pfam_scan;Pfam:PF10995; E()=7.6E-131;score=434.9;query 164-474;description=DUF2819; hypothetical protein 3827549..3829120 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762637 YP_005234629.1 CDS STMMW_36121 NC_016854.1 3829117 3829308 D pfam_scan;Pfam:PF11120; E()=5.1E-33;score=111.6;query 2-63;description=DUF2636; tmhmm; query 1-64; hypothetical protein 3829117..3829308 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762638 YP_005234630.1 CDS STMMW_36161 NC_016854.1 3831818 3833116 D pfam_scan;Pfam:PF03222; E()=4.6E-6;score=25.2;query 29-406;description=Trp_Tyr_perm; tmhmm; query 1-433; putative amino acid permease 3831818..3833116 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762641 YP_005234631.1 CDS STMMW_36171 NC_016854.1 3833217 3834230 R pfam_scan;Pfam:PF00005; E()=1.3E-44;score=152.3;query 48-223;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=9.6E-21;score=72.6;query241-306;description=oligo_HPY; dipeptide transport ATP-binding protein DppF complement(3833217..3834230) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762642 YP_005234632.1 CDS STMMW_36181 NC_016854.1 3834227 3835210 R pfam_scan;Pfam:PF00005; E()=6.7E-47;score=159.8;query 33-214;description=ABC_tran; pfam_scan;Pfam:PF08352; E()=3.4E-19;score=67.7;query233-297;description=oligo_HPY; dipeptide transport ATP-binding protein DppD complement(3834227..3835210) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762643 YP_005234633.1 CDS STMMW_36191 NC_016854.1 3835221 3836123 R pfam_scan;Pfam:PF00528; E()=3.5E-34;score=117.5;query 116-299;description=BPD_transp_1; tmhmm; query 1-301; dipeptide transport system permease DppC complement(3835221..3836123) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762644 YP_005234634.1 CDS STMMW_36201 NC_016854.1 3836133 3837152 R pfam_scan;Pfam:PF00528; E()=8.5E-46;score=155.3;query 114-337;description=BPD_transp_1; tmhmm; query 1-340; dipeptide transport system permease DppB complement(3836133..3837152) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762645 YP_005234635.1 CDS STMMW_36211 NC_016854.1 3837309 3838865 R pfam_scan;Pfam:PF00496; E()=4.2E-110;score=367.8;query 56-437;description=SBP_bac_5; periplasmic dipeptide transport protein complement(3837309..3838865) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762646 YP_005234636.1 CDS STMMW_36221 NC_016854.1 3839472 3840797 R pfam_scan;Pfam:PF00860; E()=1.0E-54;score=185.6;query 19-396;description=Xan_ur_permease; tmhmm; query 1-442; putative xanthine permease complement(3839472..3840797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762647 YP_005234637.1 CDS STMMW_36231 NC_016854.1 3840855 3841979 R pfam_scan;Pfam:PF05935; E()=5.1E-14;score=51.4;query39- 239;description=Arylsulfotrans; hypothetical protein complement(3840855..3841979) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762648 YP_005234638.1 CDS STMMW_36241 NC_016854.1 3842129 3843136 D pfam_scan;Pfam:PF00356; E()=5.1E-14;score=51.6;query11-55;description=LacI; pfam_scan;Pfam:PF00532; E()=4.8E-9;score=35.3;query 122-305;description=Peripla_BP_1; tmhmm; query 1-336; putative LacI family transcriptional regulator 3842129..3843136 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762649 YP_005234639.1 CDS STMMW_36251 NC_016854.1 3843463 3845154 R pfam_scan;Pfam:PF00884; E()=9.3E-67;score=224.6;query 249-544;description=Sulfatase; pfam_scan;Pfam:PF08019; E()=9.7E-13;score=47.6;query58-167;description=DUF1705; tmhmm; query 1-564; hypothetical protein complement(3843463..3845154) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762650 YP_005234640.1 CDS STMMW_36261 NC_016854.1 3845372 3845899 R pfam_scan;Pfam:PF00419; E()=4.2E-19;score=69.2;query29-175;description=Fimbrial; fimbrial protein (LpfE) complement(3845372..3845899) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762651 YP_005234641.1 CDS STMMW_36281 NC_016854.1 3846992 3849520 R pfam_scan;Pfam:PF00577; E()=1.2E-300;score=998.4;query 34-825;description=Usher; outer membrane usher protein (LpfC) complement(3846992..3849520) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762653 YP_005234642.1 CDS STMMW_36291 NC_016854.1 3849543 3850241 R pfam_scan;Pfam:PF00345; E()=1.1E-46;score=157.5;query 25-144;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=2.0E-16;score=59.4;query151- 224;description=Pili_assembly_C; tmhmm; query 1-233; fimbrial chaperone protein (LpfB) complement(3849543..3850241) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762654 YP_005234643.1 CDS STMMW_36301 NC_016854.1 3850326 3850862 R pfam_scan;Pfam:PF00419; E()=1.4E-47;score=161.6;query 30-178;description=Fimbrial; long polar fimbria protein A (LpfA) complement(3850326..3850862) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762655 YP_005234644.1 CDS STMMW_36311 NC_016854.1 3851368 3852072 R pfam_scan;Pfam:PF03797; E()=1.8E-12;score=46.7;query90- 217;description=Autotransporter; tmhmm; query 1-235; putative lipoprotein complement(3851368..3852072) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762656 YP_005234645.1 CDS STMMW_36321 NC_016854.1 3852229 3852810 D pfam_scan;Pfam:PF03352; E()=1.0E-85;score=285.4;query 6-183;description=Adenine_glyco; 3-methyladenine DNA glycosylase 3852229..3852810 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762657 YP_005234646.1 CDS STMMW_36331 NC_016854.1 3852788 3853228 D pfam_scan;Pfam:PF00583; E()=1.8E-11;score=43.5;query54- 121;description=Acetyltransf_1; putative acetyltransferase 3852788..3853228 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762658 YP_005234647.1 CDS STMMW_36341 NC_016854.1 3853197 3855530 R pfam_scan;Pfam:PF00384; E()=1.2E-84;score=284.1;query 56-517;description=Molybdopterin; pfam_scan;Pfam:PF01568; E()=4.4E-23;score=80.5;query637- 740;description=Molydop_binding; biotin sulfoxide reductase complement(3853197..3855530) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762659 YP_005234648.1 CDS STMMW_36351 NC_016854.1 3855716 3856345 D pfam_scan;Pfam:PF00691; E()=2.4E-24;score=85.0;query104-199;description=OmpA; tmhmm; query 1-210; putative outer membrane protein 3855716..3856345 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762660 YP_005234649.1 CDS STMMW_36361 NC_016854.1 3856564 3857538 D pfam_scan;Pfam:PF02826; E()=2.5E-63;score=212.5;query 108-287;description=2-Hacid_dh_C; pfam_scan;Pfam:PF00389; E()=4.9E-30;score=103.9;query 7-319;description=2-Hacid_dh; putative 2-hydroxyacid dehydrogenase 3856564..3857538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762661 YP_005234650.1 CDS STMMW_36371 NC_016854.1 3857588 3858298 R pfam_scan;Pfam:PF11254; E()=5.9E-97;score=322.9;query 8-233;description=DUF3053; tmhmm; query 1-237; lipoprotein complement(3857588..3858298) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762662 YP_005234651.1 CDS STMMW_36381 NC_016854.1 3858737 3859027 D pfam_scan;Pfam:PF01381; E()=8.5E-6;score=25.1;query 40-80;description=HTH_3; putative HTH-type transcriptional regulator 3858737..3859027 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762663 YP_005234652.1 CDS STMMW_36391 NC_016854.1 3859316 3859528 D pfam_scan;Pfam:PF00313; E()=5.3E-33;score=111.9;query 4-69;description=CSD; cold shock protein 3859316..3859528 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762664 YP_005234653.1 CDS STMMW_36401 NC_016854.1 3859702 3860241 D Signal peptide; signalp; query 1-21;cleavage_site_probability=0.990; 1.000; hypothetical protein 3859702..3860241 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762665 YP_005234654.1 CDS STMMW_36411 NC_016854.1 3860613 3861098 R putative acetyltransferase complement(3860613..3861098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762666 YP_005234655.1 CDS STMMW_36421 NC_016854.1 3861086 3861373 R pfam_scan;Pfam:PF08681; E()=3.4E-22;score=78.0;query14-90;description=DUF1778; hypothetical protein complement(3861086..3861373) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762667 YP_005234656.1 CDS STMMW_36431 NC_016854.1 3861551 3862018 R pfam_scan;Pfam:PF00583; E()=4.7E-10;score=39.0;query61- 130;description=Acetyltransf_1; putative acetyltransferase complement(3861551..3862018) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762668 YP_005234657.1 CDS STMMW_36441 NC_016854.1 3862647 3864716 R pfam_scan;Pfam:PF05746; E()=1.2E-8;score=34.5;query 582-679;description=DALR_1; pfam_scan;Pfam:PF02092; E()=5.4E-232;score=770.7;query 6-552;description=tRNA_synt_2f; glycine-tRNA synthetase, beta subunit complement(3862647..3864716) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762669 YP_005234658.1 CDS STMMW_36451 NC_016854.1 3864726 3865637 R pfam_scan;Pfam:PF02091; E()=1.0E-159;score=529.9;query 9-298;description=tRNA-synt_2e; glycine-tRNA synthetase, alpha subunit complement(3864726..3865637) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762670 YP_005234659.1 CDS STMMW_36461 NC_016854.1 3865776 3866078 R Signal peptide; signalp; query 1-28;cleavage_site_probability=0.657; 0.990; putative lipoprotein complement(3865776..3866078) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762671 YP_005234660.1 CDS STMMW_36471 NC_016854.1 3866244 3867239 D pfam_scan;Pfam:PF01757; E()=3.1E-46;score=157.5;query 5-318;description=Acyl_transf_3; tmhmm; query 1-332; hypothetical protein 3866244..3867239 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762672 YP_005234661.1 CDS STMMW_36481 NC_016854.1 3867790 3869244 R pfam_scan;Pfam:PF02782; E()=8.5E-34;score=116.7;query 249-435;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=1.2E-85;score=286.3;query 1-240;description=FGGY_N; xylulose kinase complement(3867790..3869244) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762673 YP_005234662.1 CDS STMMW_36491 NC_016854.1 3869344 3870666 R pfam_scan;Pfam:PF01261; E()=5.3E-10;score=38.6;query144- 286;description=AP_endonuc_2; D-xylose isomerase complement(3869344..3870666) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762674 YP_005234663.1 CDS STMMW_36501 NC_016854.1 3871029 3872207 D pfam_scan;Pfam:PF00165; E()=2.5E-7;score=30.2;query 294-335;description=HTH_AraC; xylose operon regulatory protein 3871029..3872207 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762675 YP_005234664.1 CDS STMMW_36511 NC_016854.1 3872268 3873092 R pfam_scan;Pfam:PF01832; E()=2.2E-22;score=79.4;query142- 267;description=Glucosaminidase; putative exported amidase complement(3872268..3873092) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762676 YP_005234665.1 CDS STMMW_36521 NC_016854.1 3873408 3875435 D pfam_scan;Pfam:PF00128; E()=1.3E-60;score=204.6;query 193-620;description=Alpha-amylase; alpha-amylase 3873408..3875435 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762677 YP_005234666.1 CDS STMMW_36531 NC_016854.1 3875609 3876859 D pfam_scan;Pfam:PF00155; E()=3.4E-23;score=81.9;query64- 391;description=Aminotran_1_2; valine--pyruvate aminotransferase 3875609..3876859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762678 YP_005234667.1 CDS STMMW_36541 NC_016854.1 3876896 3877369 R pfam_scan;Pfam:PF00037; E()=2.0E-7;score=29.7;query 84-104;description=Fer4; putative electron-transport protein complement(3876896..3877369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762679 YP_005234668.1 CDS STMMW_36551 NC_016854.1 3877486 3878286 R pfam_scan;Pfam:PF01614; E()=5.2E-41;score=139.2;query 133-258;description=IclR; pfam_scan;Pfam:PF09339; E()=3.8E-14;score=51.8;query15-64;description=HTH_IclR; putative transcriptional regulator complement(3877486..3878286) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762680 YP_005234669.1 CDS STMMW_36561 NC_016854.1 3878516 3879514 D pfam_scan;Pfam:PF02615; E()=2.0E-134;score=447.1;query 1-331;description=Ldh_2; putative carboxylic acid dehydrogenase 3878516..3879514 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762681 YP_005234670.1 CDS STMMW_36571 NC_016854.1 3879526 3879990 D pfam_scan;Pfam:PF04074; E()=4.3E-53;score=178.9;query 1-152;description=DUF386; hypothetical protein 3879526..3879990 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762682 YP_005234671.1 CDS STMMW_36581 NC_016854.1 3880014 3880946 D hypothetical protein 3880014..3880946 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762683 YP_005234672.1 CDS STMMW_36591 NC_016854.1 3881085 3881558 D pfam_scan;Pfam:PF04290; E()=2.6E-31;score=107.9;query 17-145;description=DctQ; tmhmm; query 1-158; hypothetical protein 3881085..3881558 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762684 YP_005234673.1 CDS STMMW_36601 NC_016854.1 3881561 3882838 D pfam_scan;Pfam:PF06808; E()=7.2E-147;score=489.1;query 7-416;description=DctM; tmhmm; query 1-426; hypothetical protein 3881561..3882838 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762685 YP_005234674.1 CDS STMMW_36611 NC_016854.1 3882850 3883836 D pfam_scan;Pfam:PF03480; E()=2.0E-107;score=357.9;query 30-310;description=SBP_bac_7; hypothetical protein 3882850..3883836 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762686 YP_005234675.1 CDS STMMW_36621 NC_016854.1 3883840 3885336 D pfam_scan;Pfam:PF02782; E()=7.0E-21;score=74.6;query260-441;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=1.7E-87;score=292.3;query 4-250;description=FGGY_N; putative L-xylulose kinase 3883840..3885336 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762687 YP_005234676.1 CDS STMMW_36631 NC_016854.1 3885333 3885995 D pfam_scan;Pfam:PF00215; E()=2.5E-40;score=137.8;query 5-206;description=OMPdecase; putative hexulose-6-phosphate synthase 3885333..3885995 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762688 YP_005234677.1 CDS STMMW_36641 NC_016854.1 3885988 3886848 D pfam_scan;Pfam:PF01261; E()=5.4E-39;score=133.2;query 25-234;description=AP_endonuc_2; putative sugar-phosphate isomerase 3885988..3886848 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762689 YP_005234678.1 CDS STMMW_36651 NC_016854.1 3886842 3887537 D pfam_scan;Pfam:PF00596; E()=9.8E-52;score=174.7;query 8-196;description=Aldolase_II; putative sugar isomerase 3886842..3887537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762690 YP_005234679.1 CDS STMMW_36661 NC_016854.1 3887698 3888513 R pfam_scan;Pfam:PF02311; E()=6.5E-6;score=25.6;query 26-135;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=2.0E-9;score=36.8;query 225-260;description=HTH_AraC; putative transcriptional regulator complement(3887698..3888513) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762691 YP_005234680.1 CDS STMMW_36671 NC_016854.1 3888777 3890732 D pfam_scan;Pfam:PF07944; E()=2.1E-184;score=613.2;query 11-560;description=DUF1680; hypothetical protein 3888777..3890732 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762692 YP_005234681.1 CDS STMMW_36681 NC_016854.1 3890850 3892388 R pfam_scan;Pfam:PF00171; E()=1.4E-166;score=553.8;query 33-498;description=Aldedh; aldehyde dehydrogenase B complement(3890850..3892388) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762693 YP_005234682.1 CDS STMMW_36691 NC_016854.1 3892557 3893438 D pfam_scan;Pfam:PF00480; E()=1.5E-37;score=128.8;query 6-166;description=ROK; putative sugar kinase 3892557..3893438 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762694 YP_005234683.1 CDS STMMW_36701 NC_016854.1 3893723 3895573 R pfam_scan;Pfam:PF03144; E()=1.3E-9;score=37.8;query 189-256;description=GTP_EFTU_D2; pfam_scan;Pfam:PF09107; E()=5.6E-18;score=63.3;query558-607;description=SelB- wing_3; pfam_scan;Pfam:PF09106; E()=1.2E-17;score=62.9;query424-481;description=SelB- wing_2; pfam_scan;Pfam:PF00009; E()=3.9E-37;score=127.3;query 2-163;description=GTP_EFTU; selenocysteine-specific elongation factor complement(3893723..3895573) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762695 YP_005234684.1 CDS STMMW_36711 NC_016854.1 3895570 3896961 R pfam_scan;Pfam:PF03841; E()=1.8E-174;score=579.3;query 83-451;description=SelA; L-seryl-tRNA(Ser) selenium transferase complement(3895570..3896961) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762696 YP_005234685.1 CDS STMMW_36721 NC_016854.1 3897060 3897668 R pfam_scan;Pfam:PF00043; E()=1.1E-11;score=44.0;query97-192;description=GST_C; pfam_scan;Pfam:PF02798; E()=9.2E-7;score=28.4;query 11-71;description=GST_N; putative glutathione transferase complement(3897060..3897668) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762697 YP_005234686.1 CDS STMMW_36731 NC_016854.1 3898144 3900060 D pfam_scan;Pfam:PF00359; E()=2.9E-34;score=117.5;query 498-634;description=PTS_EIIA_2; pfam_scan;Pfam:PF02378; E()=6.0E-18;score=64.6;query18-277;description=PTS_EIIC; pfam_scan;Pfam:PF02302; E()=2.1E-9;score=37.6;query 379-454;description=PTS_IIB; tmhmm; query 1-639; mannitol-specific enzyme II of phosphotransferase system 3898144..3900060 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762698 YP_005234687.1 CDS STMMW_36741 NC_016854.1 3900281 3901429 D pfam_scan;Pfam:PF01232; E()=1.8E-29;score=102.7;query 1-123;description=Mannitol_dh; pfam_scan;Pfam:PF08125; E()=4.9E-76;score=254.5;query 148-372;description=Mannitol_dh_C; mannitol-1-phosphate dehydrogenase 3900281..3901429 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762699 YP_005234688.1 CDS STMMW_36751 NC_016854.1 3901426 3902016 D pfam_scan;Pfam:PF05068; E()=4.8E-71;score=237.4;query 28-189;description=MtlR; mannitol operon repressor (mannitol repressor protein) 3901426..3902016 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762700 YP_005234689.1 CDS STMMW_36761 NC_016854.1 3902026 3902235 R hypothetical protein complement(3902026..3902235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762701 YP_005234690.1 CDS STMMW_36771 NC_016854.1 3902526 3902888 D pfam_scan;Pfam:PF10928; E()=5.2E-32;score=108.5;query 66-118;description=DUF2810; hypothetical protein 3902526..3902888 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762702 YP_005234691.1 CDS STMMW_36781 NC_016854.1 3903378 3904061 D pfam_scan;Pfam:PF11622; E()=5.0E-7;score=29.1;query 109-204;description=DUF3251; putative lipoprotein 3903378..3904061 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762703 YP_005234692.1 CDS STMMW_36791 NC_016854.1 3904105 3908490 D pfam_scan;Pfam:PF03895; E()=3.6E-23;score=81.0;query1383-1461;description=YadA; pfam_scan;Pfam:PF05662; E()=3.9E-8;score=32.7;query 337-359;description=HIM; pfam_scan;Pfam:PF05658; E()=2.5E-5;score=23.4;query 146-172;description=Hep_Hag; putative inner membrane protein 3904105..3908490 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762704 YP_005234693.1 CDS STMMW_36801 NC_016854.1 3908789 3910444 D pfam_scan;Pfam:PF02652; E()=7.2E-238;score=789.9;query 16-542;description=Lactate_perm; tmhmm; query 1-552; L-lactate permease 3908789..3910444 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762705 YP_005234694.1 CDS STMMW_36811 NC_016854.1 3910441 3911217 D pfam_scan;Pfam:PF00392; E()=5.7E-20;score=70.6;query9-71;description=GntR; pfam_scan;Pfam:PF07729; E()=4.5E-24;score=84.4;query100-223;description=FCD; L-lactate dehydrogenase operon regulator 3910441..3911217 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762706 YP_005234695.1 CDS STMMW_36821 NC_016854.1 3911214 3912404 D pfam_scan;Pfam:PF01070; E()=6.0E-131;score=436.0;query 13-375;description=FMN_dh; L-lactate dehydrogenase 3911214..3912404 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762707 YP_005234696.1 CDS STMMW_36831 NC_016854.1 3912468 3912941 D pfam_scan;Pfam:PF00588; E()=2.7E-31;score=107.9;query 2-142;description=SpoU_methylase; putative RNA-methyltransferase 3912468..3912941 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762708 YP_005234697.1 CDS STMMW_36841 NC_016854.1 3913009 3914013 R pfam_scan;Pfam:PF00356; E()=5.0E-15;score=54.8;query11-56;description=LacI; pfam_scan;Pfam:PF00532; E()=2.9E-23;score=82.0;query70- 314;description=Peripla_BP_1; putative lacI family transcriptional regulator complement(3913009..3914013) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762709 YP_005234698.1 CDS STMMW_36851 NC_016854.1 3914332 3915528 D pfam_scan;Pfam:PF01188; E()=1.1E-30;score=105.4;query 179-273;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=2.3E-13;score=49.9;query60-156;description=MR_MLE_N; putative racemase 3914332..3915528 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762710 YP_005234699.1 CDS STMMW_36861 NC_016854.1 3915602 3916912 D pfam_scan;Pfam:PF07690; E()=2.5E-50;score=171.4;query 18-305;description=MFS_1; tmhmm; query 1-437; glucarate transporter 3915602..3916912 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762711 YP_005234700.1 CDS STMMW_36871 NC_016854.1 3916995 3917816 R pfam_scan;Pfam:PF06426; E()=5.5E-41;score=138.8;query 9-113;description=SATase_N; serine acetyltransferase complement(3916995..3917816) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762712 YP_005234701.1 CDS STMMW_36881 NC_016854.1 3917894 3918913 R pfam_scan;Pfam:PF01210; E()=3.6E-56;score=188.8;query 7-164;description=NAD_Gly3P_dh_N; pfam_scan;Pfam:PF07479; E()=4.2E-56;score=188.8;query 184-325;description=NAD_Gly3P_dh_C; glycerol-3-phosphate dehydrogenase complement(3917894..3918913) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762713 YP_005234702.1 CDS STMMW_36891 NC_016854.1 3918913 3919380 R pfam_scan;Pfam:PF02556; E()=1.8E-63;score=212.3;query 1-145;description=SecB; protein-export protein SecB complement(3918913..3919380) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762714 YP_005234703.1 CDS STMMW_36901 NC_016854.1 3919424 3919675 R pfam_scan;Pfam:PF00462; E()=5.0E-24;score=83.5;query4-63;description=Glutaredoxin; glutaredoxin 3 complement(3919424..3919675) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762715 YP_005234704.1 CDS STMMW_36911 NC_016854.1 3919762 3920193 R pfam_scan;Pfam:PF00581; E()=2.9E-20;score=71.8;query43-134;description=Rhodanese; tmhmm; query 1-144; hypothetical protein complement(3919762..3920193) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762716 YP_005234705.1 CDS STMMW_36921 NC_016854.1 3920441 3921985 D pfam_scan;Pfam:PF06415; E()=2.4E-90;score=301.1;query 85-308;description=iPGM_N; pfam_scan;Pfam:PF01676; E()=2.0E-34;score=116.7;query 373-483;description=Metalloenzyme; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 3920441..3921985 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762717 YP_005234706.1 CDS STMMW_36931 NC_016854.1 3921995 3923278 D pfam_scan;Pfam:PF01551; E()=1.5E-28;score=98.1;query328- 421;description=Peptidase_M23; tmhmm; query 1-428; hypothetical protein 3921995..3923278 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762718 YP_005234707.1 CDS STMMW_36941 NC_016854.1 3923282 3924244 D pfam_scan;Pfam:PF04748; E()=6.4E-85;score=283.3;query 28-238;description=Polysacc_deac_2; tmhmm; query 1-321; hypothetical protein 3923282..3924244 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762719 YP_005234708.1 CDS STMMW_36951 NC_016854.1 3924231 3925265 R pfam_scan;Pfam:PF00535; E()=5.7E-38;score=129.6;query 9-136;description=Glycos_transf_2; putative glycosyltransferase complement(3924231..3925265) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762720 YP_005234709.1 CDS STMMW_36971 NC_016854.1 3925759 3926784 R pfam_scan;Pfam:PF08240; E()=6.6E-34;score=115.5;query 26-135;description=ADH_N; pfam_scan;Pfam:PF00107; E()=2.7E-35;score=121.1;query 164-301;description=ADH_zinc_N; threonine 3-dehydrogenase complement(3925759..3926784) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762722 YP_005234710.1 CDS STMMW_36981 NC_016854.1 3926794 3927990 R pfam_scan;Pfam:PF00155; E()=3.0E-77;score=259.7;query 43-387;description=Aminotran_1_2; 2-amino-3-ketobutyrate coenzyme A ligase complement(3926794..3927990) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762723 YP_005234711.1 CDS STMMW_36991 NC_016854.1 3928193 3929125 D pfam_scan;Pfam:PF01370; E()=2.1E-42;score=144.8;query 2-236;description=Epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 3928193..3929125 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762724 YP_005234712.1 CDS STMMW_37001 NC_016854.1 3929128 3930174 D pfam_scan;Pfam:PF01075; E()=2.0E-86;score=288.8;query 69-324;description=Glyco_transf_9; ADP-heptose--LPS-heptosyltransferase II 3929128..3930174 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762725 YP_005234713.1 CDS STMMW_37011 NC_016854.1 3930174 3931127 D pfam_scan;Pfam:PF01075; E()=2.4E-87;score=291.8;query 75-317;description=Glyco_transf_9; lipopolysaccharide heptosyltransferase-1 3930174..3931127 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762726 YP_005234714.1 CDS STMMW_37021 NC_016854.1 3931167 3932381 D pfam_scan;Pfam:PF04932; E()=1.4E-19;score=69.9;query195-339;description=Wzy_C; tmhmm; query 1-405; O-antigen ligase 3931167..3932381 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762727 YP_005234715.1 CDS STMMW_37031 NC_016854.1 3932438 3933583 R pfam_scan;Pfam:PF00534; E()=9.6E-44;score=148.5;query 180-355;description=Glycos_transf_1; lipopolysaccharide 1,2-N-acetylglucosaminetransferase complement(3932438..3933583) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762728 YP_005234716.1 CDS STMMW_37041 NC_016854.1 3933684 3934493 R lipopolysaccharide core biosynthesis protein RfaZ complement(3933684..3934493) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762729 YP_005234717.1 CDS STMMW_37051 NC_016854.1 3934643 3935341 R pfam_scan;Pfam:PF06176; E()=1.4E-126;score=419.9;query 1-229;description=WaaY; lipopolysaccharide core biosynthesis protein complement(3934643..3935341) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762730 YP_005234718.1 CDS STMMW_37061 NC_016854.1 3935364 3936374 R pfam_scan;Pfam:PF08437; E()=4.7E-21;score=73.6;query276- 332;description=Glyco_transf_8N; pfam_scan;Pfam:PF01501; E()=2.3E-64;score=217.0;query 27-274;description=Glyco_transf_8; lipopolysaccharide 1,2-glucosyltransferase complement(3935364..3936374) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762731 YP_005234719.1 CDS STMMW_37071 NC_016854.1 3936392 3937405 R pfam_scan;Pfam:PF08437; E()=3.2E-23;score=80.5;query278- 334;description=Glyco_transf_8N; pfam_scan;Pfam:PF01501; E()=3.9E-64;score=216.2;query 29-275;description=Glyco_transf_8; lipopolysaccharide 1,3-galactosyltransferase complement(3936392..3937405) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762732 YP_005234720.1 CDS STMMW_37081 NC_016854.1 3937411 3938490 R pfam_scan;Pfam:PF00534; E()=3.1E-31;score=107.8;query 176-334;description=Glycos_transf_1; lipopolysaccharide 1,6-galactosyltransferase complement(3937411..3938490) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762733 YP_005234721.1 CDS STMMW_37091 NC_016854.1 3938560 3938793 R hypothetical protein complement(3938560..3938793) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762734 YP_005234722.1 CDS STMMW_37101 NC_016854.1 3938825 3939622 R pfam_scan;Pfam:PF06293; E()=3.7E-53;score=179.3;query 20-230;description=Kdo; lipopolysaccharide core biosynthesis protein complement(3938825..3939622) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762735 YP_005234723.1 CDS STMMW_37111 NC_016854.1 3939615 3940739 R pfam_scan;Pfam:PF00534; E()=1.0E-35;score=122.4;query 183-349;description=Glycos_transf_1; lipopolysaccharide core biosynthesis protein complement(3939615..3940739) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762736 YP_005234724.1 CDS STMMW_37121 NC_016854.1 3940736 3941770 R pfam_scan;Pfam:PF01075; E()=8.1E-67;score=224.5;query 66-314;description=Glyco_transf_9; lipopolysaccharide core biosynthesis protein complement(3940736..3941770) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762737 YP_005234725.1 CDS STMMW_37131 NC_016854.1 3942281 3943492 D pfam_scan;Pfam:PF04413; E()=1.9E-77;score=257.9;query 9-190;description=Glycos_transf_N; pfam_scan;Pfam:PF00534; E()=8.9E-7;score=28.2;query 281-376;description=Glycos_transf_1; 3-deoxy-D-manno-octulosonic-acid transferase 3942281..3943492 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762738 YP_005234726.1 CDS STMMW_37141 NC_016854.1 3943501 3943980 D pfam_scan;Pfam:PF01467; E()=7.3E-31;score=106.9;query 6-134;description=CTP_transf_2; phosphopantetheine adenylyltransferase 3943501..3943980 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762739 YP_005234727.1 CDS STMMW_37151 NC_016854.1 3944008 3944817 R pfam_scan;Pfam:PF06827; E()=2.7E-9;score=36.0;query 241-269;description=zf-FPG_IleRS; pfam_scan;Pfam:PF01149; E()=1.1E-34;score=118.5;query 2-114;description=Fapy_DNA_glyco; pfam_scan;Pfam:PF06831; E()=8.7E-31;score=105.0;query 129-218;description=H2TH; formamidopyrimidine-DNA glycosylase complement(3944008..3944817) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762740 YP_005234728.1 CDS STMMW_37161 NC_016854.1 3944915 3945082 R pfam_scan;Pfam:PF00471; E()=2.7E-22;score=77.4;query6- 53;description=Ribosomal_L33; 50S ribosomal protein L33 complement(3944915..3945082) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762741 YP_005234729.1 CDS STMMW_37171 NC_016854.1 3945103 3945339 R pfam_scan;Pfam:PF00830; E()=3.7E-30;score=102.6;query 3-63;description=Ribosomal_L28; 50S ribosomal protein L28 complement(3945103..3945339) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762742 YP_005234730.1 CDS STMMW_37181 NC_016854.1 3945557 3946222 R pfam_scan;Pfam:PF04002; E()=1.3E-48;score=163.4;query 100-221;description=DUF2466; putative DNA repair protein complement(3945557..3946222) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762743 YP_005234731.1 CDS STMMW_37191 NC_016854.1 3946395 3947618 D pfam_scan;Pfam:PF02441; E()=6.6E-33;score=112.8;query 7-124;description=Flavoprotein; pfam_scan;Pfam:PF04127; E()=6.3E-47;score=159.3;query 190-370;description=DFP; hypothetical protein 3946395..3947618 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762744 YP_005234732.1 CDS STMMW_37201 NC_016854.1 3947599 3948054 D pfam_scan;Pfam:PF00692; E()=2.0E-39;score=133.5;query 16-149;description=dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 3947599..3948054 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762745 YP_005234733.1 CDS STMMW_37211 NC_016854.1 3948162 3948758 D pfam_scan;Pfam:PF00440; E()=4.7E-10;score=38.6;query18-61;description=TetR_N; putative TetR family transcriptional regulator 3948162..3948758 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762746 YP_005234734.1 CDS STMMW_37221 NC_016854.1 3948836 3949477 R pfam_scan;Pfam:PF00156; E()=8.3E-15;score=54.3;query39- 152;description=Pribosyltran; orotate phosphoribosyltransferase complement(3948836..3949477) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762747 YP_005234735.1 CDS STMMW_37231 NC_016854.1 3949556 3950272 R pfam_scan;Pfam:PF01138; E()=2.2E-32;score=111.4;query 10-140;description=RNase_PH; pfam_scan;Pfam:PF03725; E()=1.7E-15;score=56.2;query157- 222;description=RNase_PH_C; RNase PH complement(3949556..3950272) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762748 YP_005234736.1 CDS STMMW_37241 NC_016854.1 3950398 3951261 D pfam_scan;Pfam:PF03755; E()=7.8E-51;score=172.1;query 2-154;description=YicC_N; pfam_scan;Pfam:PF08340; E()=3.4E-34;score=116.2;query 202-287;description=DUF1732; hypothetical protein 3950398..3951261 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762749 YP_005234737.1 CDS STMMW_37251 NC_016854.1 3951311 3952168 R pfam_scan;Pfam:PF00126; E()=8.6E-10;score=38.1;query2-52;description=HTH_1; pfam_scan;Pfam:PF03466; E()=2.7E-12;score=45.8;query118- 266;description=LysR_substrate; putative regulatory protein complement(3951311..3952168) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762750 YP_005234738.1 CDS STMMW_37261 NC_016854.1 3952287 3953168 D pfam_scan;Pfam:PF00753; E()=9.8E-17;score=60.6;query61- 243;description=Lactamase_B; putative beta-lactamase 3952287..3953168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762751 YP_005234739.1 CDS STMMW_37271 NC_016854.1 3953419 3954036 D pfam_scan;Pfam:PF03458; E()=4.0E-21;score=74.3;query4-80;description=UPF0126; tmhmm; query 1-206; hypothetical protein 3953419..3954036 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762752 YP_005234740.1 CDS STMMW_37281 NC_016854.1 3954033 3955718 R pfam_scan;Pfam:PF03120; E()=2.6E-19;score=68.2;query312- 389;description=DNA_ligase_OB; pfam_scan;Pfam:PF01653; E()=4.6E-58;score=196.0;query 29-308;description=DNA_ligase_aden; putative DNA ligase complement(3954033..3955718) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762753 YP_005234741.1 CDS STMMW_37291 NC_016854.1 3955975 3956598 D pfam_scan;Pfam:PF00625; E()=2.0E-69;score=232.3;query 4-185;description=Guanylate_kin; 5'guanylate kinase 3955975..3956598 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762754 YP_005234742.1 CDS STMMW_37301 NC_016854.1 3956653 3956928 D pfam_scan;Pfam:PF01192; E()=1.9E-17;score=62.1;query8-62;description=RNA_pol_Rpb6; DNA-directed RNA polymerase subunit omega 3956653..3956928 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762755 YP_005234743.1 CDS STMMW_37311 NC_016854.1 3956947 3959058 D pfam_scan;Pfam:PF02824; E()=2.3E-22;score=78.1;query388-447;description=TGS; pfam_scan;Pfam:PF04607; E()=4.2E-44;score=148.8;query 235-344;description=RelA_SpoT; pfam_scan;Pfam:PF01966; E()=5.9E-14;score=51.5;query45-144;description=HD; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156 3956947..3959058 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762756 YP_005234744.1 CDS STMMW_37321 NC_016854.1 3959063 3959752 D pfam_scan;Pfam:PF00588; E()=4.9E-39;score=133.0;query 20-159;description=SpoU_methylase; tRNA (guanosine-2'-O)-methyltransferase 3959063..3959752 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762757 YP_005234745.1 CDS STMMW_37331 NC_016854.1 3959758 3961839 D pfam_scan;Pfam:PF00271; E()=1.7E-17;score=62.1;query513- 588;description=Helicase_C; pfam_scan;Pfam:PF01336; E()=7.2E-9;score=35.0;query 63-134;description=tRNA_anti; pfam_scan;Pfam:PF00270; E()=7.3E-27;score=93.8;query270-435;description=DEAD; ATP-dependent DNA helicase 3959758..3961839 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762758 YP_005234746.1 CDS STMMW_37351 NC_016854.1 3962696 3963901 R pfam_scan;Pfam:PF03616; E()=6.1E-162;score=538.3;query 3-366;description=Glt_symporter; tmhmm; query 1-402; glutamate permease complement(3962696..3963901) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762760 YP_005234747.1 CDS STMMW_37361 NC_016854.1 3964129 3965520 D pfam_scan;Pfam:PF00860; E()=3.0E-113;score=378.3;query 34-427;description=Xan_ur_permease; tmhmm; query 1-464; putative purine permease 3964129..3965520 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762761 YP_005234748.1 CDS STMMW_37371 NC_016854.1 3965641 3967350 D pfam_scan;Pfam:PF05170; E()=1.4E-170;score=568.2;query 1-546;description=AsmA; tmhmm; query 1-570; hypothetical protein 3965641..3967350 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762762 YP_005234749.1 CDS STMMW_37381 NC_016854.1 3967453 3969771 R pfam_scan;Pfam:PF01055; E()=1.2E-132;score=442.1;query 240-668;description=Glyco_hydro_31; putative glycosyl hydrolase complement(3967453..3969771) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762763 YP_005234750.1 CDS STMMW_37391 NC_016854.1 3969783 3971165 R tmhmm; query 1-461; sodium:galactoside family symporter complement(3969783..3971165) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762764 YP_005234751.1 CDS STMMW_37401 NC_016854.1 3971863 3972207 R hypothetical protein complement(3971863..3972207) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762765 YP_005234752.1 CDS STMMW_37431 NC_016854.1 3974609 3975646 D putative DNA-binding protein 3974609..3975646 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762767 YP_005234753.1 CDS STMMW_37441 NC_016854.1 3975758 3975931 R pfam_scan;Pfam:PF01527; E()=5.0E-12;score=45.5;query1- 44;description=Transposase_8; ISxac3 transposase complement(3975758..3975931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762768 YP_005234754.1 CDS STMMW_37451 NC_016854.1 3976945 3977562 D hypothetical protein 3976945..3977562 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762769 YP_005234755.1 CDS STMMW_37461 NC_016854.1 3977637 3980504 D pfam_scan;Pfam:PF03797; E()=3.3E-51;score=173.7;query 677-940;description=Autotransporter; pfam_scan;Pfam:PF03212; E()=1.7E-8;score=34.2;query 438-555;description=Pertactin; tmhmm; query 1-956; putative autotransported protein (MisL) 3977637..3980504 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762770 YP_005234756.1 CDS STMMW_37471 NC_016854.1 3980599 3980961 R putative product complement(3980599..3980961) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762771 YP_005234757.1 CDS STMMW_37481 NC_016854.1 3981074 3981931 R pfam_scan;Pfam:PF00486; E()=1.6E-10;score=39.9;query59- 133;description=Trans_reg_C; tmhmm; query 1-286; putative transcriptional regulator (MarT) complement(3981074..3981931) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762772 YP_005234758.1 CDS STMMW_37491 NC_016854.1 3981984 3982097 R putative product complement(3981984..3982097) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762773 YP_005234759.1 CDS STMMW_37501 NC_016854.1 3982715 3983395 D pfam_scan;Pfam:PF00857; E()=7.4E-24;score=83.7;query20- 172;description=Isochorismatase; putative hydrolase 3982715..3983395 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762774 YP_005234760.1 CDS STMMW_37511 NC_016854.1 3983624 3984103 R tmhmm; query 1-160; putative inner membrane protein complement(3983624..3984103) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762775 YP_005234761.1 CDS STMMW_37521 NC_016854.1 3984418 3987144 R pfam_scan;Pfam:PF00689; E()=2.8E-18;score=65.7;query732- 899;description=Cation_ATPase_C; pfam_scan;Pfam:PF00690; E()=4.8E-17;score=60.9;query34- 98;description=Cation_ATPase_N; pfam_scan;Pfam:PF00702; E()=2.1E-16;score=60.3;query373-665;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=9.4E-55;score=185.0;query 120-368;description=E1-E2_ATPase; tmhmm; query 1-909; Magnesium transport ATPase, P-type 2 complement(3984418..3987144) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762776 YP_005234762.1 CDS STMMW_37531 NC_016854.1 3987364 3988059 R pfam_scan;Pfam:PF02308; E()=6.9E-52;score=174.4;query 14-140;description=MgtC; tmhmm; query 1-232; Mg(2+) transport ATPase protein C complement(3987364..3988059) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762777 YP_005234763.1 CDS STMMW_37541 NC_016854.1 3988568 3989470 D pfam_scan;Pfam:PF00892; E()=1.8E-13;score=50.2;query16-144;description=DUF6; tmhmm; query 1-301; hypothetical protein 3988568..3989470 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762778 YP_005234764.1 CDS STMMW_37551 NC_016854.1 3989513 3990454 R pfam_scan;Pfam:PF04754; E()=4.2E-114;score=379.3;query 8-255;description=Transposase_31; hypothetical protein complement(3989513..3990454) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762779 YP_005234765.1 CDS STMMW_37561 NC_016854.1 3990690 3991433 R pfam_scan;Pfam:PF07071; E()=1.1E-93;score=312.4;query 7-226;description=DUF1341; hypothetical protein complement(3990690..3991433) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762780 YP_005234766.1 CDS STMMW_37581 NC_016854.1 3992532 3993392 R pfam_scan;Pfam:PF03613; E()=1.1E-91;score=306.3;query 20-286;description=EIID-AGA; tmhmm; query 1-287; putative PTS system protein complement(3992532..3993392) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762782 YP_005234767.1 CDS STMMW_37591 NC_016854.1 3993389 3994138 R pfam_scan;Pfam:PF03609; E()=1.4E-63;score=214.3;query 5-238;description=EII-Sor; tmhmm; query 1-250; putative PTS system protein complement(3993389..3994138) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762783 YP_005234768.1 CDS STMMW_37601 NC_016854.1 3994284 3994769 R pfam_scan;Pfam:PF03830; E()=1.4E-44;score=151.4;query 3-152;description=PTSIIB_sorb; putative PTS system protein complement(3994284..3994769) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762784 YP_005234769.1 CDS STMMW_37611 NC_016854.1 3994780 3995205 R pfam_scan;Pfam:PF03610; E()=3.2E-17;score=62.0;query9-119;description=EIIA-man; putative PTS system protein complement(3994780..3995205) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762785 YP_005234770.1 CDS STMMW_37621 NC_016854.1 3995424 3998222 R pfam_scan;Pfam:PF00158; E()=1.7E-36;score=125.2;query 116-267;description=Sigma54_activat; pfam_scan;Pfam:PF00874; E()=1.7E-6;score=27.6;query 851-930;description=PRD; putative NtrC family transcriptional regulator complement(3995424..3998222) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762786 YP_005234771.1 CDS STMMW_37631 NC_016854.1 3998419 3998712 D Signal peptide; signalp; query 1-22;cleavage_site_probability=0.999; 1.000; hypothetical protein 3998419..3998712 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762787 YP_005234772.1 CDS STMMW_37641 NC_016854.1 3998818 4000200 D pfam_scan;Pfam:PF00232; E()=1.1E-132;score=442.6;query 3-458;description=Glyco_hydro_1; putative glycosyl hydrolase 3998818..4000200 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762788 YP_005234773.1 CDS STMMW_37651 NC_016854.1 4000260 4001453 R pfam_scan;Pfam:PF07690; E()=7.3E-38;score=130.4;query 25-335;description=MFS_1; tmhmm; query 1-398; putative inner membrane transport protein complement(4000260..4001453) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762789 YP_005234774.1 CDS STMMW_37661 NC_016854.1 4001669 4002028 D pfam_scan;Pfam:PF06296; E()=3.7E-38;score=129.5;query 1-113;description=DUF1044; hypothetical protein 4001669..4002028 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762790 YP_005234775.1 CDS STMMW_37671 NC_016854.1 4002012 4002335 D pfam_scan;Pfam:PF01381; E()=7.4E-9;score=34.8;query 52-95;description=HTH_3; putative DNA-binding protein 4002012..4002335 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762791 YP_005234776.1 CDS STMMW_37681 NC_016854.1 4002426 4002695 R pfam_scan;Pfam:PF00381; E()=4.4E-24;score=83.9;query1-83;description=PTS-HPr; putative phosphocarrier protein of PTS system complement(4002426..4002695) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762792 YP_005234777.1 CDS STMMW_37691 NC_016854.1 4002705 4003565 R pfam_scan;Pfam:PF01116; E()=7.4E-85;score=283.9;query 3-279;description=F_bP_aldolase; fructose-1,6-bisphosphate aldolase complement(4002705..4003565) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762793 YP_005234778.1 CDS STMMW_37701 NC_016854.1 4003628 4005112 R pfam_scan;Pfam:PF02782; E()=1.7E-29;score=102.7;query 256-446;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=6.7E-46;score=156.1;query 7-245;description=FGGY_N; putative sugar (pentulose and hexulose) kinase complement(4003628..4005112) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762794 YP_005234779.1 CDS STMMW_37711 NC_016854.1 4005105 4006463 R pfam_scan;Pfam:PF03611; E()=1.0E-86;score=290.9;query 12-398;description=EIIC-GAT; tmhmm; query 1-453; PTS system galactitol-specific transporter subunit IIC complement(4005105..4006463) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762795 YP_005234780.1 CDS STMMW_37721 NC_016854.1 4006539 4006826 R pfam_scan;Pfam:PF02302; E()=2.0E-11;score=44.1;query5-79;description=PTS_IIB; putative IIB component of PTS system complement(4006539..4006826) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762796 YP_005234781.1 CDS STMMW_37731 NC_016854.1 4006823 4007296 R pfam_scan;Pfam:PF00359; E()=3.8E-33;score=113.9;query 18-148;description=PTS_EIIA_2; putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 complement(4006823..4007296) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762797 YP_005234782.1 CDS STMMW_37741 NC_016854.1 4007314 4008057 R pfam_scan;Pfam:PF00392; E()=4.6E-16;score=58.1;query12-75;description=GntR; pfam_scan;Pfam:PF07702; E()=4.8E-27;score=94.1;query98-236;description=UTRA; GntR family transcriptional regulator complement(4007314..4008057) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762798 YP_005234783.1 CDS STMMW_37751 NC_016854.1 4008410 4008862 R pfam_scan;Pfam:PF06711; E()=3.0E-79;score=263.6;query 1-148;description=DUF1198; tmhmm; query 1-151; hypothetical protein complement(4008410..4008862) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762799 YP_005234784.1 CDS STMMW_37761 NC_016854.1 4009055 4010446 R pfam_scan;Pfam:PF07690; E()=2.7E-36;score=125.2;query 35-397;description=MFS_1; tmhmm; query 1-464; hexosephosphate transport protein complement(4009055..4010446) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762800 YP_005234785.1 CDS STMMW_37771 NC_016854.1 4010589 4011917 R pfam_scan;Pfam:PF07690; E()=8.2E-51;score=173.0;query 35-396;description=MFS_1; tmhmm; query 1-443; regulatory protein complement(4010589..4011917) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762801 YP_005234786.1 CDS STMMW_37781 NC_016854.1 4011927 4013429 R pfam_scan;Pfam:PF02518; E()=2.0E-14;score=52.9;query412-497;description=HATPase_c; pfam_scan;Pfam:PF07730; E()=6.3E-14;score=51.6;query305-370;description=HisKA_3; pfam_scan;Pfam:PF05231; E()=4.1E-57;score=193.3;query 11-277;description=MASE1; tmhmm; query 1-501; two-component system sensor histidine kinase complement(4011927..4013429) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762802 YP_005234787.1 CDS STMMW_37791 NC_016854.1 4013429 4014019 R pfam_scan;Pfam:PF00196; E()=1.5E-22;score=78.3;query136-190;description=GerE; pfam_scan;Pfam:PF00072; E()=5.0E-25;score=87.3;query4- 112;description=Response_reg; two-component system response regulator protein complement(4013429..4014019) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762803 YP_005234788.1 CDS STMMW_37801 NC_016854.1 4014094 4015107 R hypothetical protein complement(4014094..4015107) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762804 YP_005234789.1 CDS STMMW_37811 NC_016854.1 4015119 4016435 R pfam_scan;Pfam:PF07690; E()=2.0E-11;score=43.5;query42-275;description=MFS_1; tmhmm; query 1-439; permease complement(4015119..4016435) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762805 YP_005234790.1 CDS STMMW_37821 NC_016854.1 4016466 4017386 R pfam_scan;Pfam:PF00294; E()=2.1E-66;score=223.9;query 2-294;description=PfkB; putative carbohydrate kinase complement(4016466..4017386) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762806 YP_005234791.1 CDS STMMW_37831 NC_016854.1 4017711 4018496 D pfam_scan;Pfam:PF00455; E()=1.4E-28;score=99.1;query85-235;description=DeoR; pfam_scan;Pfam:PF08220; E()=2.8E-8;score=32.8;query 8-44;description=HTH_DeoR; putative deoR family transcriptional regulator 4017711..4018496 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762807 YP_005234792.1 CDS STMMW_37841 NC_016854.1 4018498 4018788 R pfam_scan;Pfam:PF01842; E()=2.3E-9;score=36.9;query 9-74;description=ACT; acetohydroxy acid synthase I, small subunit complement(4018498..4018788) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762808 YP_005234793.1 CDS STMMW_37851 NC_016854.1 4018792 4020480 R pfam_scan;Pfam:PF00205; E()=2.9E-50;score=168.8;query 201-334;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=2.6E-61;score=205.9;query 14-181;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=1.0E-49;score=168.0;query 390-538;description=TPP_enzyme_C; acetohydroxy acid synthase I, small subunit complement(4018792..4020480) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762809 YP_005234794.1 CDS STMMW_37852 NC_016854.1 4020587 4020685 R pfam_scan;Pfam:PF08049; E()=9.1E-19;score=66.3;query1-32;description=IlvB_leader; IlvBN operon leader peptide complement(4020587..4020685) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762810 YP_005234795.1 CDS STMMW_37861 NC_016854.1 4021208 4021303 D hypothetical protein 4021208..4021303 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762811 YP_005234796.1 CDS STMMW_37871 NC_016854.1 4021319 4021408 D tmhmm; query 1-30; putative LexA-regulated protein TisB 4021319..4021408 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762812 YP_005234797.1 CDS STMMW_37881 NC_016854.1 4021501 4022361 D pfam_scan;Pfam:PF00892; E()=3.6E-6;score=26.7;query 49-139;description=DUF6; tmhmm; query 1-287; hypothetical protein 4021501..4022361 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762813 YP_005234798.1 CDS STMMW_37891 NC_016854.1 4022663 4023748 D pfam_scan;Pfam:PF07690; E()=2.4E-37;score=128.7;query 1-316;description=MFS_1; tmhmm; query 1-362; multidrug resistance protein D 4022663..4023748 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762814 YP_005234799.1 CDS STMMW_37901 NC_016854.1 4023675 4024760 R pfam_scan;Pfam:PF00150; E()=1.2E-6;score=27.0;query 90-213;description=Cellulase; tmhmm; query 1-362; hypothetical protein complement(4023675..4024760) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762815 YP_005234800.1 CDS STMMW_37911 NC_016854.1 4024824 4025747 R pfam_scan;Pfam:PF00126; E()=7.4E-19;score=67.0;query18-76;description=HTH_1; pfam_scan;Pfam:PF03466; E()=6.0E-30;score=103.5;query 99-306;description=LysR_substrate; D-serine deaminase activator complement(4024824..4025747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762816 YP_005234801.1 CDS STMMW_37921 NC_016854.1 4025973 4027310 D pfam_scan;Pfam:PF02447; E()=3.1E-160;score=533.3;query 7-444;description=GntP_permease; DsdX permease 4025973..4027310 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762817 YP_005234802.1 CDS STMMW_37931 NC_016854.1 4027328 4028650 D pfam_scan;Pfam:PF00291; E()=7.3E-39;score=133.8;query 93-397;description=PALP; D-serine dehydratase 4027328..4028650 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762818 YP_005234803.1 CDS STMMW_37941 NC_016854.1 4028732 4029262 R hypothetical protein complement(4028732..4029262) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762819 YP_005234804.1 CDS STMMW_37951 NC_016854.1 4029259 4029621 R tmhmm; query 1-121; hypothetical protein complement(4029259..4029621) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762820 YP_005234805.1 CDS STMMW_37961 NC_016854.1 4029611 4029958 R pfam_scan;Pfam:PF02656; E()=9.1E-18;score=64.1;query13-74;description=DUF202; tmhmm; query 1-116; hypothetical protein complement(4029611..4029958) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762821 YP_005234806.1 CDS STMMW_37971 NC_016854.1 4030402 4032063 R pfam_scan;Pfam:PF06826; E()=4.6E-44;score=149.6;query 11-179;description=Asp-Al_Ex; pfam_scan;Pfam:PF02080; E()=1.7E-8;score=33.9;query 211-271;description=TrkA_C; tmhmm; query 1-554; hypothetical protein complement(4030402..4032063) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762822 YP_005234807.1 CDS STMMW_37981 NC_016854.1 4032253 4032681 R pfam_scan;Pfam:PF00011; E()=2.7E-18;score=65.3;query39-134;description=HSP20; heat shock protein B complement(4032253..4032681) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762823 YP_005234808.1 CDS STMMW_37991 NC_016854.1 4032791 4033204 R pfam_scan;Pfam:PF00011; E()=1.5E-21;score=75.8;query42-137;description=HSP20; heat shock protein A complement(4032791..4033204) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762824 YP_005234809.1 CDS STMMW_38001 NC_016854.1 4033511 4033846 D pfam_scan;Pfam:PF07119; E()=1.7E-21;score=75.3;query16-78;description=DUF1375; putative lipoprotein 4033511..4033846 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762825 YP_005234810.1 CDS STMMW_38011 NC_016854.1 4033848 4035074 R putative ATP/GTP-binding protein complement(4033848..4035074) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762826 YP_005234811.1 CDS STMMW_38021 NC_016854.1 4035196 4036239 R pfam_scan;Pfam:PF03918; E()=1.0E-51;score=173.9;query 9-138;description=CcmH; tmhmm; query 1-348; cytochrome c-type biogenesis protein H1 complement(4035196..4036239) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762827 YP_005234812.1 CDS STMMW_38031 NC_016854.1 4040848 4041465 R pfam_scan;Pfam:PF00005; E()=2.3E-38;score=131.9;query 27-184;description=ABC_tran; cytochrome C biogenesis ATP-binding export protein complement(4040848..4041465) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762828 YP_005234813.1 CDS STMMW_38041 NC_016854.1 4041471 4042871 R pfam_scan;Pfam:PF03150; E()=2.0E-52;score=176.8;query 184-335;description=CCP_MauG; tmhmm; query 1-467; cytochrome c peroxidase complement(4041471..4042871) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762829 YP_005234814.1 CDS STMMW_38051 NC_016854.1 4043061 4043693 R pfam_scan;Pfam:PF02613; E()=1.6E-19;score=69.7;query43- 175;description=Nitrate_red_del; TorD protein complement(4043061..4043693) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762830 YP_005234815.1 CDS STMMW_38061 NC_016854.1 4043686 4046238 R pfam_scan;Pfam:PF00384; E()=3.3E-78;score=262.9;query 99-572;description=Molybdopterin; pfam_scan;Pfam:PF01568; E()=5.5E-23;score=80.2;query690- 811;description=Molydop_binding; trimethylamine-N-oxide reductase precursor complement(4043686..4046238) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762831 YP_005234816.1 CDS STMMW_38071 NC_016854.1 4046228 4047412 R pfam_scan;Pfam:PF03264; E()=2.7E-69;score=231.5;query 11-184;description=Cytochrom_NNT; tmhmm; query 1-395; cytochrome C-type protein complement(4046228..4047412) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762832 YP_005234817.1 CDS STMMW_38081 NC_016854.1 4047542 4048234 D pfam_scan;Pfam:PF00486; E()=2.0E-16;score=58.8;query153- 225;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=6.3E-28;score=96.7;query5- 114;description=Response_reg; torCAD operon transcriptional regulatory protein 4047542..4048234 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762833 YP_005234818.1 CDS STMMW_38091 NC_016854.1 4048207 4049247 R pfam_scan;Pfam:PF00532; E()=4.8E-61;score=205.9;query 49-329;description=Peripla_BP_1; Solute binding receptor protein complement(4048207..4049247) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762834 YP_005234819.1 CDS STMMW_38101 NC_016854.1 4049327 4052062 D pfam_scan;Pfam:PF02518; E()=4.7E-30;score=103.2;query 555-660;description=HATPase_c; pfam_scan;Pfam:PF00072; E()=5.0E-15;score=55.2;query683- 792;description=Response_reg; pfam_scan;Pfam:PF01627; E()=8.1E-11;score=41.1;query827-905;description=Hpt; pfam_scan;Pfam:PF00512; E()=1.2E-16;score=59.9;query444-507;description=HisKA; tmhmm; query 1-912; Two-component sensor protein histidine protein kinase 4049327..4052062 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762835 YP_005234820.1 CDS STMMW_38111 NC_016854.1 4052088 4053425 R pfam_scan;Pfam:PF07690; E()=6.3E-60;score=202.9;query 36-404;description=MFS_1; tmhmm; query 1-446; D-galactonate transporter complement(4052088..4053425) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762836 YP_005234821.1 CDS STMMW_38121 NC_016854.1 4053510 4054658 R pfam_scan;Pfam:PF01188; E()=1.6E-14;score=53.5;query126-230;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=4.4E-32;score=110.3;query 15-107;description=MR_MLE_N; galactonate dehydratase complement(4053510..4054658) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762837 YP_005234822.1 CDS STMMW_38131 NC_016854.1 4054655 4055272 R pfam_scan;Pfam:PF01081; E()=4.0E-29;score=101.0;query 6-183;description=Aldolase; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(4054655..4055272) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762838 YP_005234823.1 CDS STMMW_38141 NC_016854.1 4055256 4056134 R pfam_scan;Pfam:PF05035; E()=1.8E-96;score=322.1;query 9-287;description=DGOK; 2-dehydro-3-deoxygalactonokinase complement(4055256..4056134) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762839 YP_005234824.1 CDS STMMW_38151 NC_016854.1 4056131 4056820 R pfam_scan;Pfam:PF00392; E()=8.5E-14;score=50.9;query7-68;description=GntR; pfam_scan;Pfam:PF07729; E()=2.8E-25;score=88.3;query99-218;description=FCD; galactonate operon transcriptional repressor complement(4056131..4056820) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762840 YP_005234825.1 CDS STMMW_38161 NC_016854.1 4057081 4057926 R pfam_scan;Pfam:PF08282; E()=5.3E-72;score=242.1;query 6-264;description=Hydrolase_3; hypothetical protein complement(4057081..4057926) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762841 YP_005234826.1 CDS STMMW_38171 NC_016854.1 4058232 4059494 D pfam_scan;Pfam:PF07690; E()=6.9E-53;score=179.8;query 20-379;description=MFS_1; tmhmm; query 1-421; putative membrane transport protein 4058232..4059494 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762842 YP_005234827.1 CDS STMMW_38181 NC_016854.1 4059508 4060701 D pfam_scan;Pfam:PF01188; E()=6.1E-13;score=48.5;query151-266;description=MR_MLE; pfam_scan;Pfam:PF02746; E()=3.5E-20;score=71.9;query21-121;description=MR_MLE_N; racemase 4059508..4060701 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762843 YP_005234828.1 CDS STMMW_38191 NC_016854.1 4060816 4061712 D pfam_scan;Pfam:PF00126; E()=2.3E-15;score=55.8;query5-64;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.0E-28;score=99.4;query95- 284;description=LysR_substrate; putative LysR family transcriptional regulator 4060816..4061712 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762844 YP_005234829.1 CDS STMMW_38201 NC_016854.1 4061731 4064145 R pfam_scan;Pfam:PF00986; E()=3.2E-29;score=99.5;query731- 793;description=DNA_gyraseB_C; pfam_scan;Pfam:PF01751; E()=2.1E-4;score=21.0;query 420-521;description=Toprim; pfam_scan;Pfam:PF02518; E()=1.8E-18;score=65.9;query32-171;description=HATPase_c; pfam_scan;Pfam:PF00204; E()=5.7E-64;score=214.5;query 221-391;description=DNA_gyraseB; DNA gyrase subunit B complement(4061731..4064145) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762845 YP_005234830.1 CDS STMMW_38211 NC_016854.1 4064174 4065247 R pfam_scan;Pfam:PF02463; E()=1.3E-37;score=129.1;query 3-353;description=SMC_N; recF protein complement(4064174..4065247) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762846 YP_005234831.1 CDS STMMW_38221 NC_016854.1 4065395 4066495 R pfam_scan;Pfam:PF02767; E()=3.6E-42;score=142.4;query 129-243;description=DNA_pol3_beta_2; pfam_scan;Pfam:PF00712; E()=1.4E-44;score=150.7;query 1-120;description=DNA_pol3_beta; pfam_scan;Pfam:PF02768; E()=6.9E-44;score=148.0;query 245-365;description=DNA_pol3_beta_3; DNA polymerase III beta-subunit complement(4065395..4066495) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762847 YP_005234832.1 CDS STMMW_38231 NC_016854.1 4066500 4067900 R pfam_scan;Pfam:PF08299; E()=8.4E-33;score=111.4;query 374-443;description=Bac_DnaA_C; pfam_scan;Pfam:PF00308; E()=6.6E-101;score=335.7;query 132-348;description=Bac_DnaA; chromosomal replication initiator protein complement(4066500..4067900) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762848 YP_005234833.1 CDS STMMW_38241 NC_016854.1 4068561 4068701 D pfam_scan;Pfam:PF00468; E()=8.4E-24;score=81.8;query1- 44;description=Ribosomal_L34; 50S ribosomal protein L34 4068561..4068701 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762849 YP_005234834.1 CDS STMMW_38251 NC_016854.1 4068718 4069077 D pfam_scan;Pfam:PF00825; E()=5.8E-34;score=115.7;query 6-111;description=Ribonuclease_P; RNase P, protein component 4068718..4069077 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762850 YP_005234835.1 CDS STMMW_38261 NC_016854.1 4069041 4069298 D pfam_scan;Pfam:PF01809; E()=1.0E-32;score=110.5;query 10-75;description=DUF37; hypothetical protein 4069041..4069298 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762851 YP_005234836.1 CDS STMMW_38271 NC_016854.1 4069301 4070947 D pfam_scan;Pfam:PF02096; E()=4.1E-73;score=244.7;query 352-533;description=60KD_IMP; tmhmm; query 1-549; hypothetical protein 4069301..4070947 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762852 YP_005234837.1 CDS STMMW_38281 NC_016854.1 4071089 4072453 D pfam_scan;Pfam:PF01926; E()=6.4E-31;score=106.6;query 218-338;description=MMR_HSR1; pfam_scan;Pfam:PF10396; E()=3.5E-42;score=142.5;query 6-120;description=TrmE_N; pfam_scan;Pfam:PF02421; E()=8.3E-7;score=28.4;query 218-306;description=FeoB_N; thiophene and furan oxidation protein 4071089..4072453 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762853 YP_005234838.1 CDS STMMW_38301 NC_016854.1 4074254 4075216 D hypothetical protein 4074254..4075216 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762855 YP_005234839.1 CDS STMMW_38311 NC_016854.1 4075282 4076151 D pfam_scan;Pfam:PF00078; E()=2.1E-22;score=78.8;query4-217;description=RVT_1; reverse transcriptase 4075282..4076151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762856 YP_005234840.1 CDS STMMW_38321 NC_016854.1 4076953 4078140 D pfam_scan;Pfam:PF07690; E()=5.0E-43;score=147.4;query 10-340;description=MFS_1; tmhmm; query 1-396; putative membrane transport protein 4076953..4078140 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762857 YP_005234841.1 CDS STMMW_38331 NC_016854.1 4078109 4079068 D pfam_scan;Pfam:PF00126; E()=2.1E-13;score=49.6;query10-66;description=HTH_1; pfam_scan;Pfam:PF03466; E()=8.5E-14;score=50.7;query115- 313;description=LysR_substrate; putative LysR family transcriptional regulator 4078109..4079068 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762858 YP_005234842.1 CDS STMMW_38341 NC_016854.1 4079226 4079981 D hypothetical protein 4079226..4079981 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762859 YP_005234843.1 CDS STMMW_38351 NC_016854.1 4079981 4080565 D pfam_scan;Pfam:PF03358; E()=2.4E-45;score=153.7;query 12-155;description=FMN_red; hypothetical protein 4079981..4080565 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762860 YP_005234844.1 CDS STMMW_38361 NC_016854.1 4080610 4082073 R pfam_scan;Pfam:PF00860; E()=7.9E-41;score=139.9;query 73-444;description=Xan_ur_permease; tmhmm; query 1-488; putative membrane transport protein complement(4080610..4082073) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762861 YP_005234845.1 CDS STMMW_38371 NC_016854.1 4082116 4082781 D pfam_scan;Pfam:PF00702; E()=2.8E-25;score=89.2;query4-182;description=Hydrolase; putative hydrolase 4082116..4082781 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762862 YP_005234846.1 CDS STMMW_38381 NC_016854.1 4082876 4083601 R pfam_scan;Pfam:PF01895; E()=1.2E-22;score=79.8;query26-112;description=PhoU; phosphate transport system regulatory protein complement(4082876..4083601) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762863 YP_005234847.1 CDS STMMW_38391 NC_016854.1 4083616 4084389 R pfam_scan;Pfam:PF00005; E()=3.6E-50;score=170.5;query 37-214;description=ABC_tran; phosphate transport ATP-binding protein complement(4083616..4084389) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762864 YP_005234848.1 CDS STMMW_38401 NC_016854.1 4084476 4085366 R pfam_scan;Pfam:PF00528; E()=1.7E-28;score=99.0;query101- 290;description=BPD_transp_1; tmhmm; query 1-297; phosphate transport system permease complement(4084476..4085366) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762865 YP_005234849.1 CDS STMMW_38411 NC_016854.1 4085366 4086325 R pfam_scan;Pfam:PF00528; E()=5.3E-15;score=55.0;query96- 303;description=BPD_transp_1; tmhmm; query 1-320; phosphate transport system permease complement(4085366..4086325) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762866 YP_005234850.1 CDS STMMW_38421 NC_016854.1 4086461 4087501 R tmhmm; query 1-347; phosphate-binding protein complement(4086461..4087501) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762867 YP_005234851.1 CDS STMMW_38431 NC_016854.1 4087668 4089041 R pfam_scan;Pfam:PF02378; E()=4.0E-15;score=55.3;query129-393;description=PTS_EIIC; pfam_scan;Pfam:PF02302; E()=1.6E-19;score=70.0;query6-91;description=PTS_IIB; tmhmm; query 1-458; PTS system permease complement(4087668..4089041) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762868 YP_005234852.1 CDS STMMW_38441 NC_016854.1 4089090 4089908 R pfam_scan;Pfam:PF01488; E()=3.3E-7;score=29.5;query 126-215;description=Shikimate_DH; pfam_scan;Pfam:PF08501; E()=4.2E-16;score=58.5;query25- 93;description=Shikimate_dh_N; putative shikimate 5-dehydrogenase complement(4089090..4089908) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762869 YP_005234853.1 CDS STMMW_38451 NC_016854.1 4090003 4091760 D pfam_scan;Pfam:PF00496; E()=7.9E-29;score=100.5;query 164-317;description=SBP_bac_5; hypothetical protein 4090003..4091760 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762870 YP_005234854.1 CDS STMMW_38461 NC_016854.1 4091911 4093740 R pfam_scan;Pfam:PF01380; E()=1.0E-32;score=112.4;query 290-417;description=SIS; pfam_scan;Pfam:PF00310; E()=5.6E-18;score=64.7;query61-152;description=GATase_2; glucosamine--fructose-6-phosphate aminotransferase complement(4091911..4093740) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762871 YP_005234855.1 CDS STMMW_38471 NC_016854.1 4093929 4095299 R pfam_scan;Pfam:PF00483; E()=3.1E-15;score=55.8;query9- 212;description=NTP_transferase; UDP-n-acetylglucosamine pyrophosphorylase complement(4093929..4095299) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762872 YP_005234856.1 CDS STMMW_38481 NC_016854.1 4095619 4096317 R pfam_scan;Pfam:PF01027; E()=1.7E-26;score=92.8;query21-229;description=UPF0005; tmhmm; query 1-233; hypothetical protein complement(4095619..4096317) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762873 YP_005234857.1 CDS STMMW_38491 NC_016854.1 4096547 4096966 R pfam_scan;Pfam:PF00401; E()=1.6E-14;score=53.4;query88-134;description=ATP- synt_DE; pfam_scan;Pfam:PF02823; E()=1.1E-30;score=104.5;query 6-84;description=ATP-synt_DE_N; ATP synthase subunit epsilon complement(4096547..4096966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762874 YP_005234858.1 CDS STMMW_38501 NC_016854.1 4096987 4098369 R pfam_scan;Pfam:PF00006; E()=2.8E-68;score=229.0;query 129-342;description=ATP-synt_ab; pfam_scan;Pfam:PF02874; E()=1.3E-21;score=75.9;query6-72;description=ATP- synt_ab_N; pfam_scan;Pfam:PF00306; E()=2.2E-34;score=117.6;query 355-459;description=ATP-synt_ab_C; ATP synthase subunit beta complement(4096987..4098369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762875 YP_005234859.1 CDS STMMW_38511 NC_016854.1 4098396 4099259 R pfam_scan;Pfam:PF00231; E()=3.6E-114;score=380.5;query 2-287;description=ATP-synt; ATP synthase subunit gamma complement(4098396..4099259) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762876 YP_005234860.1 CDS STMMW_38521 NC_016854.1 4099310 4100851 R pfam_scan;Pfam:PF00006; E()=2.5E-79;score=265.1;query 148-375;description=ATP-synt_ab; pfam_scan;Pfam:PF02874; E()=1.2E-13;score=50.5;query28-92;description=ATP- synt_ab_N; pfam_scan;Pfam:PF00306; E()=7.4E-19;score=67.6;query387-470;description=ATP- synt_ab_C; ATP synthase subunit alpha complement(4099310..4100851) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762877 YP_005234861.1 CDS STMMW_38531 NC_016854.1 4100864 4101397 R pfam_scan;Pfam:PF00213; E()=9.5E-51;score=171.8;query 7-173;description=OSCP; ATP synthase subunit delta complement(4100864..4101397) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762878 YP_005234862.1 CDS STMMW_38541 NC_016854.1 4101412 4101882 R pfam_scan;Pfam:PF00430; E()=1.1E-34;score=118.9;query 6-137;description=ATP-synt_B; tmhmm; query 1-157; ATP synthase subunit B complement(4101412..4101882) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762879 YP_005234863.1 CDS STMMW_38551 NC_016854.1 4102228 4103043 R pfam_scan;Pfam:PF00119; E()=8.1E-61;score=204.8;query 39-265;description=ATP-synt_A; tmhmm; query 1-272; ATP synthase subunit A complement(4102228..4103043) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762880 YP_005234864.1 CDS STMMW_38561 NC_016854.1 4103052 4103432 R pfam_scan;Pfam:PF03899; E()=2.4E-15;score=56.1;query13-108;description=ATP_synt_I; tmhmm; query 1-127; ATP synthase protein I complement(4103052..4103432) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762881 YP_005234865.1 CDS STMMW_38571 NC_016854.1 4104048 4104671 R pfam_scan;Pfam:PF02527; E()=2.6E-66;score=221.9;query 21-200;description=GidB; glucose inhibited division protein complement(4104048..4104671) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762882 YP_005234866.1 CDS STMMW_38581 NC_016854.1 4104774 4106663 R pfam_scan;Pfam:PF01134; E()=8.8E-185;score=614.0;query 8-398;description=GIDA; glucose inhibited division protein complement(4104774..4106663) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762883 YP_005234867.1 CDS STMMW_38591 NC_016854.1 4107042 4107485 R pfam_scan;Pfam:PF00258; E()=2.5E-27;score=95.5;query7- 138;description=Flavodoxin_1; MioC protein complement(4107042..4107485) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762884 YP_005234868.1 CDS STMMW_38601 NC_016854.1 4107575 4108033 R pfam_scan;Pfam:PF08279; E()=9.1E-5;score=21.8;query 23-66;description=HTH_11; pfam_scan;Pfam:PF01037; E()=5.1E-17;score=61.0;query75- 143;description=AsnC_trans_reg; regulatory protein complement(4107575..4108033) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762885 YP_005234869.1 CDS STMMW_38611 NC_016854.1 4108184 4109176 D pfam_scan;Pfam:PF03590; E()=3.2E-129;score=429.1;query 4-246;description=AsnA; asparagine synthetase A 4108184..4109176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762886 YP_005234870.1 CDS STMMW_38621 NC_016854.1 4109181 4110581 R pfam_scan;Pfam:PF05762; E()=1.7E-10;score=40.2;query288-428;description=VWA_CoxE; hypothetical protein complement(4109181..4110581) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762887 YP_005234871.1 CDS STMMW_38631 NC_016854.1 4110626 4112122 R pfam_scan;Pfam:PF07728; E()=3.0E-29;score=101.3;query 42-171;description=AAA_5; hypothetical protein complement(4110626..4112122) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762888 YP_005234872.1 CDS STMMW_38641 NC_016854.1 4112470 4114338 D pfam_scan;Pfam:PF02705; E()=8.1E-30;score=103.4;query 14-97;description=K_trans; tmhmm; query 1-623; membrane transport protein 4112470..4114338 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762889 YP_005234873.1 CDS STMMW_38651 NC_016854.1 4114535 4114954 D pfam_scan;Pfam:PF05025; E()=2.8E-53;score=179.3;query 1-139;description=RbsD_FucU; high affinity ribose transport protein RbsD 4114535..4114954 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762890 YP_005234874.1 CDS STMMW_38661 NC_016854.1 4114962 4116467 D pfam_scan;Pfam:PF00005; E()=1.8E-40;score=138.8;query 30-202;description=ABC_tran; high affinity ribose transport protein 4114962..4116467 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762891 YP_005234875.1 CDS STMMW_38671 NC_016854.1 4116473 4117438 D pfam_scan;Pfam:PF02653; E()=3.5E-59;score=199.9;query 45-314;description=BPD_transp_2; tmhmm; query 1-322; high affinity ribose transport protein 4116473..4117438 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762892 YP_005234876.1 CDS STMMW_38681 NC_016854.1 4117463 4118353 D pfam_scan;Pfam:PF00532; E()=8.3E-27;score=93.6;query27- 278;description=Peripla_BP_1; D-ribose-binding periplasmic protein 4117463..4118353 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762893 YP_005234877.1 CDS STMMW_38691 NC_016854.1 4118487 4119416 D pfam_scan;Pfam:PF00294; E()=5.3E-77;score=258.7;query 6-297;description=PfkB; ribokinase 4118487..4119416 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762894 YP_005234878.1 CDS STMMW_38701 NC_016854.1 4119420 4120418 D pfam_scan;Pfam:PF00356; E()=5.8E-19;score=67.3;query3-48;description=LacI; pfam_scan;Pfam:PF00532; E()=9.0E-33;score=113.2;query 60-310;description=Peripla_BP_1; ribose operon repressor 4119420..4120418 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762895 YP_005234879.1 CDS STMMW_38711 NC_016854.1 4120384 4121811 R pfam_scan;Pfam:PF07690; E()=3.0E-48;score=164.5;query 17-406;description=MFS_1; tmhmm; query 1-476; putative transmembrane efflux protein complement(4120384..4121811) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762896 YP_005234880.1 CDS STMMW_38721 NC_016854.1 4121823 4122527 R pfam_scan;Pfam:PF00392; E()=7.4E-18;score=63.8;query18-77;description=GntR; pfam_scan;Pfam:PF07729; E()=1.8E-23;score=82.5;query108-225;description=FCD; GntR family transcriptional regulator; 20.8 kDa protein in rbsr-rrsc intergenic region complement(4121823..4122527) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762897 YP_005234881.1 CDS STMMW_38731 NC_016854.1 4128419 4129267 R pfam_scan;Pfam:PF00126; E()=9.1E-20;score=69.9;query8-66;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.5E-12;score=46.7;query91- 264;description=LysR_substrate; LysR family transcriptional regulatory protein complement(4128419..4129267) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762904 YP_005234882.1 CDS STMMW_38741 NC_016854.1 4129374 4129712 D pfam_scan;Pfam:PF04219; E()=2.6E-38;score=129.5;query 10-99;description=DUF413; hypothetical protein 4129374..4129712 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762905 YP_005234883.1 CDS STMMW_38751 NC_016854.1 4129737 4131257 R pfam_scan;Pfam:PF01078; E()=1.5E-90;score=301.5;query 189-386;description=Mg_chelatase; Putative competence protein (chelatase) complement(4129737..4131257) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762906 YP_005234884.1 CDS STMMW_38761 NC_016854.1 4131847 4133493 D pfam_scan;Pfam:PF00205; E()=1.2E-49;score=166.8;query 186-321;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=3.8E-62;score=208.6;query 1-165;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=6.4E-55;score=184.9;query 374-522;description=TPP_enzyme_C; acetolactate synthase large subunit 4131847..4133493 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762907 YP_005234885.1 CDS STMMW_38771 NC_016854.1 4133493 4133753 D acetohydroxy acid synthase II, small subunit 4133493..4133753 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759564 YP_005234886.1 CDS STMMW_38781 NC_016854.1 4133771 4134700 D pfam_scan;Pfam:PF01063; E()=1.4E-52;score=178.1;query 53-289;description=Aminotran_4; branched-chain amino-acid aminotransferase 4133771..4134700 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762908 YP_005234887.1 CDS STMMW_38791 NC_016854.1 4134861 4136711 D pfam_scan;Pfam:PF00920; E()=1.3E-194;score=646.9;query 34-607;description=ILVD_EDD; dihydroxyacid dehydratase 4134861..4136711 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762909 YP_005234888.1 CDS STMMW_38801 NC_016854.1 4136714 4138258 D pfam_scan;Pfam:PF00585; E()=3.9E-30;score=102.9;query 329-419;description=Thr_dehydrat_C; pfam_scan;Pfam:PF00291; E()=5.3E-68;score=229.5;query 28-316;description=PALP; threonine deaminase 4136714..4138258 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759565 YP_005234889.1 CDS STMMW_38811 NC_016854.1 4138542 4138859 D pfam_scan;Pfam:PF05973; E()=6.6E-21;score=73.7;query7-94;description=Gp49; hypothetical protein 4138542..4138859 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759566 YP_005234890.1 CDS STMMW_38821 NC_016854.1 4138856 4139197 D hypothetical protein 4138856..4139197 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762910 YP_005234891.1 CDS STMMW_38831 NC_016854.1 4139200 4140087 R pfam_scan;Pfam:PF00126; E()=9.2E-21;score=73.1;query3-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=4.5E-35;score=120.2;query 89-293;description=LysR_substrate; LysR family regulatory protein for ilvC expression complement(4139200..4140087) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762911 YP_005234892.1 CDS STMMW_38841 NC_016854.1 4140251 4141726 D pfam_scan;Pfam:PF07991; E()=2.5E-55;score=186.4;query 35-204;description=IlvN; pfam_scan;Pfam:PF01450; E()=2.3E-16;score=59.6;query210-340;description=IlvC; ketol-acid reductoisomerase 4140251..4141726 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762912 YP_005234893.1 CDS STMMW_38851 NC_016854.1 4141818 4142099 R pfam_scan;Pfam:PF00639; E()=3.8E-22;score=78.1;query9-89;description=Rotamase; peptidyl-prolyl cis-trans isomerase C complement(4141818..4142099) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762913 YP_005234894.1 CDS STMMW_38881 NC_016854.1 4142637 4144661 D pfam_scan;Pfam:PF00580; E()=3.5E-175;score=583.0;query 3-480;description=UvrD-helicase; ATP-dependent DNA helicase 4142637..4144661 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762916 YP_005234895.1 CDS STMMW_38891 NC_016854.1 4144701 4146182 R pfam_scan;Pfam:PF02541; E()=1.6E-103;score=345.8;query 20-300;description=Ppx-GppA; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (guanosine pentaphosphatase) complement(4144701..4146182) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762917 YP_005234896.1 CDS STMMW_38901 NC_016854.1 4146301 4147566 R pfam_scan;Pfam:PF00271; E()=8.3E-26;score=88.7;query276- 351;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=3.5E-51;score=173.3;query 33-207;description=DEAD; putative ATP-dependent RNA helicase complement(4146301..4147566) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762918 YP_005234897.1 CDS STMMW_38911 NC_016854.1 4147710 4148039 D pfam_scan;Pfam:PF00085; E()=1.6E-35;score=120.5;query 5-106;description=Thioredoxin; thioredoxin 4147710..4148039 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762919 YP_005234898.1 CDS STMMW_38921 NC_016854.1 4148458 4149717 D pfam_scan;Pfam:PF00006; E()=4.9E-57;score=192.3;query 159-364;description=ATP-synt_ab; pfam_scan;Pfam:PF07497; E()=1.1E-40;score=136.4;query 49-126;description=Rho_RNA_bind; pfam_scan;Pfam:PF07498; E()=1.1E-15;score=56.0;query5-47;description=Rho_N; transcription termination factor 4148458..4149717 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762920 YP_005234899.1 CDS STMMW_38931 NC_016854.1 4149947 4151050 D pfam_scan;Pfam:PF00953; E()=1.9E-33;score=115.6;query 75-233;description=Glycos_transf_4; tmhmm; query 1-368; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 4149947..4151050 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762921 YP_005234900.1 CDS STMMW_38941 NC_016854.1 4151062 4152108 D pfam_scan;Pfam:PF02706; E()=7.4E-16;score=58.2;query15-158;description=Wzz; lipopolysaccharide biosynthesis protein 4151062..4152108 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762922 YP_005234901.1 CDS STMMW_38951 NC_016854.1 4152164 4153294 D pfam_scan;Pfam:PF02350; E()=2.2E-136;score=453.9;query 21-370;description=Epimerase_2; UDP-N-acetyl-D-glucosamine 2-epimerase 4152164..4153294 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762923 YP_005234902.1 CDS STMMW_38961 NC_016854.1 4153291 4154553 D pfam_scan;Pfam:PF00984; E()=8.5E-29;score=98.9;query206- 292;description=UDPG_MGDP_dh; pfam_scan;Pfam:PF03720; E()=4.0E-18;score=65.4;query324- 419;description=UDPG_MGDP_dh_C; pfam_scan;Pfam:PF03721; E()=1.2E-56;score=191.0;query 5-195;description=UDPG_MGDP_dh_N; UDP-ManNAc dehydrogenase 4153291..4154553 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762924 YP_005234903.1 CDS STMMW_38971 NC_016854.1 4154553 4155620 D pfam_scan;Pfam:PF01370; E()=1.6E-73;score=246.6;query 4-252;description=Epimerase; UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase) 4154553..4155620 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762925 YP_005234904.1 CDS STMMW_38981 NC_016854.1 4155653 4155877 D pfam_scan;Pfam:PF00483; E()=1.0E-7;score=31.2;query 2-25;description=NTP_transferase; glucose-1-phosphate thymidylyltransferase 4155653..4155877 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762926 YP_005234905.1 CDS STMMW_38991 NC_016854.1 4155984 4156532 D pfam_scan;Pfam:PF00583; E()=2.7E-6;score=27.0;query 104-170;description=Acetyltransf_1; lipopolysaccharide biosynthesis protein 4155984..4156532 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762927 YP_005234906.1 CDS STMMW_39001 NC_016854.1 4156537 4157667 D pfam_scan;Pfam:PF01041; E()=4.6E-89;score=298.6;query 12-371;description=DegT_DnrJ_EryC1; lipopolysaccharide biosynthesis protein 4156537..4157667 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762928 YP_005234907.1 CDS STMMW_39011 NC_016854.1 4157669 4158919 D pfam_scan;Pfam:PF01943; E()=2.1E-14;score=52.8;query3- 283;description=Polysacc_synt; tmhmm; query 1-417; putative lipopolysaccharide biosynthesis protein 4157669..4158919 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762929 YP_005234908.1 CDS STMMW_39021 NC_016854.1 4158916 4159995 D pfam_scan;Pfam:PF07429; E()=9.0E-187;score=619.3;query 1-358;description=Fuc4NAc_transf; hypothetical protein 4158916..4159995 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762930 YP_005234909.1 CDS STMMW_39031 NC_016854.1 4159992 4161350 D pfam_scan;Pfam:PF06899; E()=5.0E-270;score=895.2;query 1-449;description=WzyE; tmhmm; query 1-453; 4-alpha-l-fucosyltransferase 4159992..4161350 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762931 YP_005234910.1 CDS STMMW_39041 NC_016854.1 4161347 4162087 D pfam_scan;Pfam:PF03808; E()=1.0E-56;score=190.5;query 61-230;description=Glyco_tran_WecB; UDP-N-acetyl-D-mannosaminuronic acid transferase 4161347..4162087 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762932 YP_005234911.1 CDS STMMW_39051 NC_016854.1 4162294 4163679 D pfam_scan;Pfam:PF00324; E()=4.2E-116;score=387.6;query 16-446;description=AA_permease; tmhmm; query 1-462; amino acid permease 4162294..4163679 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762933 YP_005234912.1 CDS STMMW_39061 NC_016854.1 4164796 4165935 R pfam_scan;Pfam:PF07219; E()=2.1E-40;score=137.1;query 1-114;description=HemY_N; pfam_scan;Pfam:PF07719; E()=9.7E-6;score=24.8;query 310-341;description=TPR_2; tmhmm; query 1-380; porphyrin biosynthetic protein complement(4164796..4165935) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762934 YP_005234913.1 CDS STMMW_39071 NC_016854.1 4165995 4167164 R pfam_scan;Pfam:PF04375; E()=4.6E-147;score=489.4;query 8-378;description=HemX; tmhmm; query 1-390; uroporphyrinogen III methylase complement(4165995..4167164) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762935 YP_005234914.1 CDS STMMW_39081 NC_016854.1 4167186 4167926 R pfam_scan;Pfam:PF02602; E()=7.1E-37;score=126.4;query 14-242;description=HEM4; uroporphyrinogen III synthase complement(4167186..4167926) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762936 YP_005234915.1 CDS STMMW_39091 NC_016854.1 4167923 4168879 R pfam_scan;Pfam:PF01379; E()=2.1E-90;score=301.3;query 11-221;description=Porphobil_deam; pfam_scan;Pfam:PF03900; E()=1.5E-24;score=85.6;query230- 303;description=Porphobil_deamC; porphobilinogen deaminase complement(4167923..4168879) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762937 YP_005234916.1 CDS STMMW_39101 NC_016854.1 4169241 4171787 D pfam_scan;Pfam:PF01295; E()=0.0;score=1248.7;query 1-825;description=Adenylate_cycl; adenylate cyclase 4169241..4171787 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762938 YP_005234917.1 CDS STMMW_39111 NC_016854.1 4171895 4172248 D tmhmm; query 1-118; putative inner membrane protein 4171895..4172248 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762939 YP_005234918.1 CDS STMMW_39121 NC_016854.1 4172434 4172976 D tmhmm; query 1-181; putative inner membrane protein 4172434..4172976 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762940 YP_005234919.1 CDS STMMW_39131 NC_016854.1 4172988 4173350 D tmhmm; query 1-121; hypothetical protein 4172988..4173350 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762941 YP_005234920.1 CDS STMMW_39141 NC_016854.1 4173421 4173741 R pfam_scan;Pfam:PF01491; E()=2.3E-41;score=139.8;query 1-105;description=Frataxin_Cyay; CyaY protein complement(4173421..4173741) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762942 YP_005234921.1 CDS STMMW_39151 NC_016854.1 4173811 4174200 R pfam_scan;Pfam:PF11457; E()=1.3E-10;score=40.9;query13-128;description=DUF3021; tmhmm; query 1-130; hypothetical protein complement(4173811..4174200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762943 YP_005234922.1 CDS STMMW_39171 NC_016854.1 4174896 4175099 D tmhmm; query 1-68; putative lipoprotein 4174896..4175099 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762945 YP_005234923.1 CDS STMMW_39181 NC_016854.1 4175133 4175960 D pfam_scan;Pfam:PF01678; E()=5.1E-38;score=129.1;query 4-124;description=DAP_epimerase; diaminopimelate epimerase 4175133..4175960 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762946 YP_005234924.1 CDS STMMW_39191 NC_016854.1 4175957 4176664 D pfam_scan;Pfam:PF04340; E()=2.1E-81;score=272.2;query 10-232;description=DUF484; hypothetical protein 4175957..4176664 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762947 YP_005234925.1 CDS STMMW_39201 NC_016854.1 4176661 4177563 D pfam_scan;Pfam:PF00589; E()=3.9E-47;score=160.0;query 125-286;description=Phage_integrase; pfam_scan;Pfam:PF02899; E()=4.1E-24;score=84.0;query11- 93;description=Phage_integr_N; integrase/recombinase 4176661..4177563 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762948 YP_005234926.1 CDS STMMW_39211 NC_016854.1 4177563 4178279 D pfam_scan;Pfam:PF00702; E()=5.8E-23;score=81.7;query11-207;description=Hydrolase; hypothetical protein 4177563..4178279 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762949 YP_005234927.1 CDS STMMW_39221 NC_016854.1 4178415 4180577 D pfam_scan;Pfam:PF00580; E()=1.1E-179;score=597.8;query 10-489;description=UvrD-helicase; DNA helicase II 4178415..4180577 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762950 YP_005234928.1 CDS STMMW_39231 NC_016854.1 4181049 4181999 D pfam_scan;Pfam:PF01544; E()=1.2E-55;score=188.4;query 26-312;description=CorA; tmhmm; query 1-317; magnesium and cobalt transport protein 4181049..4181999 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762951 YP_005234929.1 CDS STMMW_39241 NC_016854.1 4182048 4182428 R pfam_scan;Pfam:PF10947; E()=3.5E-20;score=71.4;query18-118;description=DUF2628; tmhmm; query 1-127; hypothetical protein complement(4182048..4182428) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762952 YP_005234930.1 CDS STMMW_39251 NC_016854.1 4182444 4182902 R tmhmm; query 1-153; hypothetical protein complement(4182444..4182902) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762953 YP_005234931.1 CDS STMMW_39261 NC_016854.1 4182937 4183821 R pfam_scan;Pfam:PF00892; E()=8.6E-15;score=54.5;query18-142;description=DUF6; tmhmm; query 1-295; chloramphenicol-sensitive protein RarD complement(4182937..4183821) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762954 YP_005234932.1 CDS STMMW_39271 NC_016854.1 4183865 4184350 R pfam_scan;Pfam:PF03061; E()=2.0E-13;score=49.3;query64-149;description=4HBT; hypothetical protein complement(4183865..4184350) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762955 YP_005234933.1 CDS STMMW_39281 NC_016854.1 4184620 4185366 D pfam_scan;Pfam:PF02253; E()=4.2E-93;score=310.7;query 3-245;description=PLA1; detergent-resistant phospholipase A 4184620..4185366 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762956 YP_005234934.1 CDS STMMW_39291 NC_016854.1 4185432 4187279 D pfam_scan;Pfam:PF00271; E()=3.0E-22;score=77.4;query261- 337;description=Helicase_C; pfam_scan;Pfam:PF09382; E()=2.3E-32;score=110.6;query 417-519;description=RQC; pfam_scan;Pfam:PF00570; E()=5.7E-26;score=89.6;query539-606;description=HRDC; pfam_scan;Pfam:PF00270; E()=2.2E-27;score=95.5;query33-193;description=DEAD; ATP-dependent DNA helicase 4185432..4187279 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762957 YP_005234935.1 CDS STMMW_39301 NC_016854.1 4187343 4187963 D pfam_scan;Pfam:PF01810; E()=5.4E-58;score=195.1;query 14-205;description=LysE; tmhmm; query 1-207; threonine efflux protein 4187343..4187963 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762958 YP_005234936.1 CDS STMMW_39311 NC_016854.1 4188003 4188623 R pfam_scan;Pfam:PF01810; E()=4.0E-48;score=162.9;query 16-202;description=LysE; tmhmm; query 1-207; homoserine/homoserine lactone efflux protein complement(4188003..4188623) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762959 YP_005234937.1 CDS STMMW_39321 NC_016854.1 4188734 4189750 D pfam_scan;Pfam:PF00561; E()=2.2E-31;score=108.7;query 82-319;description=Abhydrolase_1; lysophospholipase L2 4188734..4189750 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762960 YP_005234938.1 CDS STMMW_39331 NC_016854.1 4189766 4190566 D pfam_scan;Pfam:PF08282; E()=4.4E-64;score=216.1;query 5-260;description=Hydrolase_3; hypothetical protein 4189766..4190566 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762961 YP_005234939.1 CDS STMMW_39341 NC_016854.1 4190647 4191546 D pfam_scan;Pfam:PF00892; E()=1.3E-6;score=28.1;query 10-128;description=DUF6; tmhmm; query 1-300; hypothetical protein 4190647..4191546 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762962 YP_005234940.1 CDS STMMW_39351 NC_016854.1 4191434 4192387 R pfam_scan;Pfam:PF00126; E()=1.3E-15;score=56.7;query4-63;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.3E-42;score=144.8;query 86-288;description=LysR_substrate; trans-activator of metE and metH complement(4191434..4192387) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762963 YP_005234941.1 CDS STMMW_39361 NC_016854.1 4192636 4194900 D pfam_scan;Pfam:PF01717; E()=1.2E-157;score=523.8;query 426-748;description=Meth_synt_2; pfam_scan;Pfam:PF08267; E()=3.0E-130;score=433.3;query 5-313;description=Meth_synt_1; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4192636..4194900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762964 YP_005234942.1 CDS STMMW_39371 NC_016854.1 4195244 4196587 D pfam_scan;Pfam:PF02810; E()=6.7E-9;score=33.9;query 428-446;description=SEC-C; pfam_scan;Pfam:PF04055; E()=8.5E-18;score=64.4;query32- 200;description=Radical_SAM; putative regulatory protein 4195244..4196587 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762965 YP_005234943.1 CDS STMMW_39381 NC_016854.1 4196667 4197479 R pfam_scan;Pfam:PF01738; E()=1.2E-73;score=246.4;query 42-265;description=DLH; putative hydrolase complement(4196667..4197479) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762966 YP_005234944.1 CDS STMMW_39391 NC_016854.1 4197738 4198499 D pfam_scan;Pfam:PF01048; E()=1.3E-38;score=132.1;query 21-245;description=PNP_UDP_1; uridine phosphorylase 4197738..4198499 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762967 YP_005234945.1 CDS STMMW_39401 NC_016854.1 4198639 4200069 D pfam_scan;Pfam:PF02646; E()=1.4E-112;score=375.3;query 136-438;description=RmuC; tmhmm; query 1-477; hypothetical protein 4198639..4200069 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762968 YP_005234946.1 CDS STMMW_39411 NC_016854.1 4200165 4200920 D pfam_scan;Pfam:PF01209; E()=1.1E-114;score=381.0;query 15-250;description=Ubie_methyltran; ubiquinone/menaquinone biosynthesis methyltransferase UbiE 4200165..4200920 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762969 YP_005234947.1 CDS STMMW_39421 NC_016854.1 4200930 4201535 D pfam_scan;Pfam:PF02036; E()=7.1E-21;score=74.0;query15-112;description=SCP2; hypothetical protein 4200930..4201535 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762970 YP_005234948.1 CDS STMMW_39431 NC_016854.1 4201532 4203172 D pfam_scan;Pfam:PF03109; E()=1.5E-35;score=121.4;query 115-232;description=ABC1; tmhmm; query 1-547; ubiquinone biosynthesis protein 4201532..4203172 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762971 YP_005234949.1 CDS STMMW_39441 NC_016854.1 4203378 4203632 D pfam_scan;Pfam:PF02416; E()=7.0E-15;score=53.8;query4-55;description=MttA_Hcf106; tmhmm; query 1-85; Sec-independent protein translocase protein 4203378..4203632 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762972 YP_005234950.1 CDS STMMW_39451 NC_016854.1 4203636 4204184 D Sec-independent protein translocase protein 4203636..4204184 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762973 YP_005234951.1 CDS STMMW_39461 NC_016854.1 4204187 4204966 D pfam_scan;Pfam:PF00902; E()=9.8E-74;score=247.0;query 11-221;description=TatC; tmhmm; query 1-260; Sec-independent protein translocase protein 4204187..4204966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762974 YP_005234952.1 CDS STMMW_39471 NC_016854.1 4205008 4205790 D pfam_scan;Pfam:PF01026; E()=5.9E-77;score=257.9;query 2-256;description=TatD_DNase; putative deoxyribonuclease 4205008..4205790 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762975 YP_005234953.1 CDS STMMW_39481 NC_016854.1 4205798 4206286 R pfam_scan;Pfam:PF02357; E()=9.5E-25;score=86.4;query3-90;description=NusG; transcriptional activator complement(4205798..4206286) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762976 YP_005234954.1 CDS STMMW_39491 NC_016854.1 4206472 4207950 D pfam_scan;Pfam:PF01977; E()=1.3E-170;score=567.1;query 14-437;description=UbiD; hypothetical protein 4206472..4207950 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762977 YP_005234955.1 CDS STMMW_39501 NC_016854.1 4208036 4208737 D pfam_scan;Pfam:PF00175; E()=7.9E-21;score=74.0;query108- 211;description=NAD_binding_1; pfam_scan;Pfam:PF00970; E()=1.4E-8;score=34.2;query 5-65;description=FAD_binding_6; flavin reductase 4208036..4208737 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762978 YP_005234956.1 CDS STMMW_39511 NC_016854.1 4208991 4210814 D pfam_scan;Pfam:PF05935; E()=4.2E-180;score=599.1;query 46-594;description=Arylsulfotrans; transferase 4208991..4210814 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762979 YP_005234957.1 CDS STMMW_39521 NC_016854.1 4211011 4212174 R pfam_scan;Pfam:PF00108; E()=2.8E-90;score=301.6;query 1-254;description=Thiolase_N; pfam_scan;Pfam:PF02803; E()=4.3E-52;score=174.8;query 261-386;description=Thiolase_C; small (beta) subunit of the fatty acid-oxidizing multienzyme complex complement(4211011..4212174) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762980 YP_005234958.1 CDS STMMW_39531 NC_016854.1 4212184 4214373 R pfam_scan;Pfam:PF00378; E()=1.2E-57;score=193.6;query 18-189;description=ECH; pfam_scan;Pfam:PF00725; E()=3.1E-25;score=87.9;query496-592;description=3HCDH; pfam_scan;Pfam:PF02737; E()=1.9E-60;score=203.5;query 316-494;description=3HCDH_N; large (alpha) subunit of the fatty acid-oxidizing multienzyme complex complement(4212184..4214373) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762981 YP_005234959.1 CDS STMMW_39541 NC_016854.1 4214563 4215894 D pfam_scan;Pfam:PF00557; E()=3.1E-42;score=144.1;query 168-430;description=Peptidase_M24; proline dipeptidase 4214563..4215894 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762982 YP_005234960.1 CDS STMMW_39551 NC_016854.1 4215894 4216508 D pfam_scan;Pfam:PF01205; E()=2.4E-37;score=126.9;query 17-125;description=UPF0029; pfam_scan;Pfam:PF09186; E()=1.5E-14;score=52.9;query141-195;description=DUF1949; hypothetical protein 4215894..4216508 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762983 YP_005234961.1 CDS STMMW_39561 NC_016854.1 4216547 4217998 D pfam_scan;Pfam:PF02386; E()=9.4E-89;score=297.0;query 153-481;description=TrkH; tmhmm; query 1-484; Trk system potassium uptake protein 4216547..4217998 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762984 YP_005234962.1 CDS STMMW_39571 NC_016854.1 4218010 4218555 D pfam_scan;Pfam:PF00258; E()=4.0E-5;score=23.5;query 5-83;description=Flavodoxin_1; protoporphyrinogen oxidase 4218010..4218555 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762985 YP_005234963.1 CDS STMMW_39581 NC_016854.1 4224451 4224966 R pfam_scan;Pfam:PF03205; E()=8.4E-32;score=109.6;query 3-128;description=MobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(4224451..4224966) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762991 YP_005234964.1 CDS STMMW_39591 NC_016854.1 4224963 4225547 R molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(4224963..4225547) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762992 YP_005234965.1 CDS STMMW_39601 NC_016854.1 4225617 4225886 D pfam_scan;Pfam:PF06288; E()=8.3E-45;score=150.0;query 1-86;description=DUF1040; hypothetical protein 4225617..4225886 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762993 YP_005234966.1 CDS STMMW_39611 NC_016854.1 4225963 4226949 D pfam_scan;Pfam:PF01636; E()=6.8E-40;score=136.8;query 31-260;description=APH; hypothetical protein 4225963..4226949 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762994 YP_005234967.1 CDS STMMW_39621 NC_016854.1 4226966 4227589 D pfam_scan;Pfam:PF01323; E()=3.8E-32;score=110.9;query 40-196;description=DSBA; thiol:disulfide interchange protein 4226966..4227589 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762995 YP_005234968.1 CDS STMMW_39631 NC_016854.1 4227602 4228510 R pfam_scan;Pfam:PF01553; E()=8.6E-24;score=83.5;query74- 213;description=Acyltransferase; tmhmm; query 1-303; putative acyltransferase complement(4227602..4228510) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759567 YP_005234969.1 CDS STMMW_39641 NC_016854.1 4228898 4231684 D pfam_scan;Pfam:PF01612; E()=1.2E-42;score=145.1;query 330-517;description=3_5_exonuc; pfam_scan;Pfam:PF01367; E()=3.1E-29;score=100.7;query 171-274;description=5_3_exonuc; pfam_scan;Pfam:PF02739; E()=1.4E-59;score=199.7;query 8-169;description=5_3_exonuc_N; pfam_scan;Pfam:PF00476; E()=1.2E-172;score=573.3;query 548-927;description=DNA_pol_A; DNA polymerase I 4228898..4231684 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759568 YP_005234970.1 CDS STMMW_39651 NC_016854.1 4232019 4232618 R pfam_scan;Pfam:PF01926; E()=5.5E-21;score=74.5;query16-137;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=8.7E-6;score=25.1;query 16-185;description=FeoB_N; ATP/GTP-binding protein complement(4232019..4232618) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762996 YP_005234971.1 CDS STMMW_39661 NC_016854.1 4232891 4233115 D hypothetical protein 4232891..4233115 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762997 YP_005234972.1 CDS STMMW_39671 NC_016854.1 4233234 4233737 D pfam_scan;Pfam:PF04220; E()=9.4E-54;score=181.2;query 10-162;description=DUF414; hypothetical protein 4233234..4233737 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762998 YP_005234973.1 CDS STMMW_39681 NC_016854.1 4233926 4235299 D pfam_scan;Pfam:PF06969; E()=9.9E-26;score=89.7;query311-431;description=HemN_C; pfam_scan;Pfam:PF04055; E()=8.1E-22;score=77.5;query56- 227;description=Radical_SAM; oxygen-independent coproporphyrinogen III oxidase 4233926..4235299 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762999 YP_005234974.1 CDS STMMW_39691 NC_016854.1 4235612 4237021 R pfam_scan;Pfam:PF00158; E()=1.1E-73;score=246.2;query 140-307;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=4.9E-14;score=51.2;query427-466;description=HTH_8; pfam_scan;Pfam:PF00072; E()=1.7E-33;score=114.6;query 6-115;description=Response_reg; two-component system response regulator complement(4235612..4237021) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763000 YP_005234975.1 CDS STMMW_39701 NC_016854.1 4237030 4238079 R pfam_scan;Pfam:PF00989; E()=7.9E-7;score=28.9;query 11-97;description=PAS; pfam_scan;Pfam:PF02518; E()=5.5E-24;score=83.7;query234-347;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=8.5E-14;score=50.8;query131-186;description=HisKA; Two-component system sensory histidine kinase complement(4237030..4238079) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763001 YP_005234976.1 CDS STMMW_39711 NC_016854.1 4238354 4239763 R pfam_scan;Pfam:PF03951; E()=1.2E-33;score=114.1;query 14-95;description=Gln-synt_N; pfam_scan;Pfam:PF00120; E()=1.5E-110;score=367.9;query 103-379;description=Gln-synt_C; glutamine synthetase complement(4238354..4239763) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763002 YP_005234977.1 CDS STMMW_39721 NC_016854.1 4239742 4240170 R hypothetical protein complement(4239742..4240170) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763003 YP_005234978.1 CDS STMMW_39731 NC_016854.1 4240139 4241962 D pfam_scan;Pfam:PF00679; E()=4.2E-22;score=77.4;query397-477;description=EFG_C; pfam_scan;Pfam:PF03144; E()=4.3E-10;score=39.3;query219- 289;description=GTP_EFTU_D2; pfam_scan;Pfam:PF00009; E()=1.7E-57;score=193.7;query 4-195;description=GTP_EFTU; GTP-binding protein 4240139..4241962 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763004 YP_005234979.1 CDS STMMW_39741 NC_016854.1 4242017 4242751 R pfam_scan;Pfam:PF08282; E()=1.2E-26;score=93.4;query6-100;description=Hydrolase_3; hypothetical protein complement(4242017..4242751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763005 YP_005234980.1 CDS STMMW_39751 NC_016854.1 4242736 4243614 R hypothetical protein complement(4242736..4243614) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763006 YP_005234981.1 CDS STMMW_39761 NC_016854.1 4243611 4244852 R pfam_scan;Pfam:PF06969; E()=4.8E-10;score=39.1;query276-390;description=HemN_C; pfam_scan;Pfam:PF04055; E()=2.3E-18;score=66.2;query43- 212;description=Radical_SAM; putative coproporphyrinogen III oxidase complement(4243611..4244852) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763007 YP_005234982.1 CDS STMMW_39771 NC_016854.1 4244854 4245729 R pfam_scan;Pfam:PF00884; E()=3.8E-15;score=55.0;query34-274;description=Sulfatase; hypothetical protein complement(4244854..4245729) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763008 YP_005234983.1 CDS STMMW_39781 NC_016854.1 4245722 4246747 R hypothetical protein complement(4245722..4246747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763009 YP_005234984.1 CDS STMMW_39791 NC_016854.1 4246760 4247608 R hypothetical protein complement(4246760..4247608) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763010 YP_005234985.1 CDS STMMW_39801 NC_016854.1 4247765 4248457 R pfam_scan;Pfam:PF06178; E()=8.8E-82;score=273.5;query 14-230;description=KdgM; hypothetical protein complement(4247765..4248457) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763011 YP_005234986.1 CDS STMMW_39811 NC_016854.1 4248525 4249946 R tmhmm; query 1-474; putative membrane transport protein complement(4248525..4249946) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763012 YP_005234987.1 CDS STMMW_39821 NC_016854.1 4249992 4251374 R tmhmm; query 1-461; putative membrane permease complement(4249992..4251374) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763013 YP_005234988.1 CDS STMMW_39831 NC_016854.1 4251420 4253456 R pfam_scan;Pfam:PF01055; E()=6.8E-94;score=314.4;query 231-666;description=Glyco_hydro_31; putative glycosyl hydrolase complement(4251420..4253456) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763014 YP_005234989.1 CDS STMMW_39841 NC_016854.1 4253500 4254357 R pfam_scan;Pfam:PF01263; E()=3.7E-48;score=163.8;query 12-281;description=Aldose_epim; hypothetical protein complement(4253500..4254357) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763015 YP_005234990.1 CDS STMMW_39851 NC_016854.1 4254361 4255602 R pfam_scan;Pfam:PF07221; E()=6.2E-131;score=436.2;query 32-387;description=GlcNAc_2-epim; hypothetical protein complement(4254361..4255602) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763016 YP_005234991.1 CDS STMMW_39861 NC_016854.1 4255618 4256496 R pfam_scan;Pfam:PF01791; E()=4.3E-49;score=166.6;query 17-257;description=DeoC; putative aldolase complement(4255618..4256496) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763017 YP_005234992.1 CDS STMMW_39871 NC_016854.1 4256519 4257415 R pfam_scan;Pfam:PF03446; E()=5.8E-49;score=165.5;query 1-162;description=NAD_binding_2; putative oxidoreductase complement(4256519..4257415) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763018 YP_005234993.1 CDS STMMW_39881 NC_016854.1 4257580 4258476 D pfam_scan;Pfam:PF00294; E()=1.3E-64;score=217.9;query 3-286;description=PfkB; putative sugar kinase 4257580..4258476 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763019 YP_005234994.1 CDS STMMW_39891 NC_016854.1 4258510 4259313 D pfam_scan;Pfam:PF00455; E()=7.7E-54;score=181.2;query 80-236;description=DeoR; pfam_scan;Pfam:PF08220; E()=2.3E-20;score=71.2;query11-66;description=HTH_DeoR; putative deoR family transcriptional regulator 4258510..4259313 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763020 YP_005234995.1 CDS STMMW_39901 NC_016854.1 4259504 4260103 D pfam_scan;Pfam:PF00702; E()=3.8E-17;score=62.7;query4-185;description=Hydrolase; putative haloacid dehalogenase-like hydrolase 4259504..4260103 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763021 YP_005234996.1 CDS STMMW_39911 NC_016854.1 4260097 4260969 D pfam_scan;Pfam:PF03631; E()=1.7E-59;score=201.2;query 29-275;description=Ribonuclease_BN; tmhmm; query 1-291; ribonuclease BN 4260097..4260969 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763022 YP_005234997.1 CDS STMMW_39921 NC_016854.1 4260966 4261403 D pfam_scan;Pfam:PF02580; E()=9.6E-60;score=200.4;query 3-144;description=Tyr_Deacylase; hypothetical protein 4260966..4261403 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763023 YP_005234998.1 CDS STMMW_39931 NC_016854.1 4261400 4262389 D pfam_scan;Pfam:PF00583; E()=1.5E-13;score=50.2;query66- 138;description=Acetyltransf_1; pfam_scan;Pfam:PF09500; E()=3.8E-24;score=84.0;query234- 314;description=YiiD_Cterm; putative acetyltransferase 4261400..4262389 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763024 YP_005234999.1 CDS STMMW_39941 NC_016854.1 4262404 4262850 R pfam_scan;Pfam:PF01381; E()=1.8E-7;score=30.4;query 93-145;description=HTH_3; hypothetical protein complement(4262404..4262850) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763025 YP_005235000.1 CDS STMMW_39951 NC_016854.1 4262847 4263158 R pfam_scan;Pfam:PF09907; E()=4.3E-23;score=80.2;query19-94;description=DUF2136; hypothetical protein complement(4262847..4263158) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763026 YP_005235001.1 CDS STMMW_39961 NC_016854.1 4263244 4264173 R pfam_scan;Pfam:PF07859; E()=5.3E-68;score=228.3;query 75-280;description=Abhydrolase_3; putative lipase complement(4263244..4264173) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763027 YP_005235002.1 CDS STMMW_39971 NC_016854.1 4264739 4264993 D pfam_scan;Pfam:PF01381; E()=2.5E-9;score=36.3;query 25-62;description=HTH_3; putative DNA-binding protein 4264739..4264993 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763028 YP_005235003.1 CDS STMMW_39981 NC_016854.1 4265040 4265969 R pfam_scan;Pfam:PF04216; E()=2.0E-118;score=394.4;query 17-304;description=FdhE; FdhE protein complement(4265040..4265969) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763029 YP_005235004.1 CDS STMMW_39991 NC_016854.1 4265966 4266601 R pfam_scan;Pfam:PF00033; E()=2.1E-26;score=92.2;query8- 184;description=Cytochrom_B_N; tmhmm; query 1-212; formate dehydrogenase-O gamma subunit complement(4265966..4266601) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763030 YP_005235005.1 CDS STMMW_40001 NC_016854.1 4266598 4267500 R pfam_scan;Pfam:PF09163; E()=4.2E-20;score=70.6;query246-289;description=Form- deh_trans; pfam_scan;Pfam:PF00037; E()=3.0E-5;score=22.8;query 129-147;description=Fer4; formate dehydrogenase-O beta subunit complement(4266598..4267500) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763031 YP_005235006.1 CDS STMMW_40011 NC_016854.1 4267513 4270563 R selenocysteine; pfam_scan;Pfam:PF00384; E()=1.5E-28;score=99.5;query107- 588;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=4.5E-15;score=54.8;query44- 104;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=3.7E-17;score=61.5;query893- 1008;description=Molydop_binding; tmhmm; query 1-1016; Signal peptide; signalp; query 1-34;cleavage_site_probability=0.993; 1.000; formate dehydrogenase-O, major subunit complement(join(4267513..4269975,4269979..4270563)) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763032 YP_005235007.1 CDS STMMW_40021 NC_016854.1 4270758 4271594 D pfam_scan;Pfam:PF02634; E()=1.3E-75;score=253.7;query 38-275;description=FdhD-NarQ; FdhD protein 4270758..4271594 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763033 YP_005235008.1 CDS STMMW_40031 NC_016854.1 4271862 4272893 R Signal peptide; signalp; query 1-22;cleavage_site_probability=0.997; 0.999; putative lipoprotein complement(4271862..4272893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763034 YP_005235009.1 CDS STMMW_40041 NC_016854.1 4273118 4274176 D putative lipoprotein 4273118..4274176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763035 YP_005235010.1 CDS STMMW_40051 NC_016854.1 4274531 4274854 R pfam_scan;Pfam:PF05437; E()=7.6E-12;score=45.0;query8-102;description=AzlD; tmhmm; query 1-108; hypothetical protein complement(4274531..4274854) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763036 YP_005235011.1 CDS STMMW_40061 NC_016854.1 4274854 4275513 R pfam_scan;Pfam:PF03591; E()=1.1E-31;score=109.4;query 19-155;description=AzlC; tmhmm; query 1-220; hypothetical protein complement(4274854..4275513) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763037 YP_005235012.1 CDS STMMW_40071 NC_016854.1 4275596 4276162 D pfam_scan;Pfam:PF07883; E()=2.2E-6;score=26.9;query 119-178;description=Cupin_2; pfam_scan;Pfam:PF01381; E()=1.3E-12;score=46.8;query21-70;description=HTH_3; putative DNA-binding protein 4275596..4276162 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763038 YP_005235013.1 CDS STMMW_40081 NC_016854.1 4276251 4276565 R pfam_scan;Pfam:PF05336; E()=6.3E-39;score=131.7;query 3-104;description=DUF718; hypothetical protein complement(4276251..4276565) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763039 YP_005235014.1 CDS STMMW_40091 NC_016854.1 4276562 4277710 R pfam_scan;Pfam:PF00465; E()=2.0E-126;score=421.2;query 11-374;description=Fe-ADH; alcohol dehydrogenase complement(4276562..4277710) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763040 YP_005235015.1 CDS STMMW_40101 NC_016854.1 4277837 4278664 R pfam_scan;Pfam:PF00596; E()=3.4E-20;score=72.0;query13- 238;description=Aldolase_II; rhamnulose-1-phosphate aldolase complement(4277837..4278664) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763041 YP_005235016.1 CDS STMMW_40111 NC_016854.1 4278807 4280066 R pfam_scan;Pfam:PF06134; E()=1.6E-237;score=787.6;query 3-418;description=RhaA; L-rhamnose isomerase complement(4278807..4280066) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763042 YP_005235017.1 CDS STMMW_40121 NC_016854.1 4280063 4281532 R pfam_scan;Pfam:PF02782; E()=2.9E-36;score=124.7;query 253-439;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=1.0E-28;score=99.8;query7-241;description=FGGY_N; rhamnulokinase complement(4280063..4281532) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763043 YP_005235018.1 CDS STMMW_40131 NC_016854.1 4281820 4282656 D pfam_scan;Pfam:PF02311; E()=8.7E-22;score=77.0;query17- 159;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=1.5E-6;score=27.7;query 180-221;description=HTH_AraC; L-rhamnose operon regulatory protein 4281820..4282656 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763044 YP_005235019.1 CDS STMMW_40141 NC_016854.1 4282809 4283657 D pfam_scan;Pfam:PF02311; E()=2.4E-19;score=69.1;query23- 161;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=6.8E-12;score=44.6;query238-276;description=HTH_AraC; L-rhamnose operon transcriptional activator 4282809..4283657 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763045 YP_005235020.1 CDS STMMW_40151 NC_016854.1 4283654 4284688 R pfam_scan;Pfam:PF06379; E()=6.9E-228;score=755.3;query 1-344;description=RhaT; tmhmm; query 1-345; L rhamnose-proton symporter complement(4283654..4284688) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763046 YP_005235021.1 CDS STMMW_40161 NC_016854.1 4285307 4285990 D pfam_scan;Pfam:PF06178; E()=8.2E-81;score=270.3;query 16-227;description=KdgM; hypothetical protein 4285307..4285990 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763047 YP_005235022.1 CDS STMMW_40171 NC_016854.1 4286148 4287455 R pfam_scan;Pfam:PF06808; E()=4.5E-137;score=456.8;query 13-424;description=DctM; tmhmm; query 1-436; putative membrane transport protein complement(4286148..4287455) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763048 YP_005235023.1 CDS STMMW_40181 NC_016854.1 4287448 4287963 R pfam_scan;Pfam:PF04290; E()=6.0E-32;score=110.0;query 23-153;description=DctQ; tmhmm; query 1-172; trap dicarboxylate transporter, dctq subunit complement(4287448..4287963) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763049 YP_005235024.1 CDS STMMW_40191 NC_016854.1 4287982 4288965 R pfam_scan;Pfam:PF03480; E()=4.8E-74;score=248.3;query 33-310;description=SBP_bac_7; trap dicarboxylate transporter, dctp subunit complement(4287982..4288965) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763050 YP_005235025.1 CDS STMMW_40201 NC_016854.1 4289294 4289914 D pfam_scan;Pfam:PF02777; E()=1.4E-40;score=137.0;query 96-202;description=Sod_Fe_C; pfam_scan;Pfam:PF00081; E()=2.1E-32;score=110.5;query 2-89;description=Sod_Fe_N; manganese superoxide dismutase 4289294..4289914 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763051 YP_005235026.1 CDS STMMW_40211 NC_016854.1 4289921 4290673 D pfam_scan;Pfam:PF03475; E()=5.1E-12;score=44.8;query189-235;description=3-alpha; pfam_scan;Pfam:PF03473; E()=5.4E-34;score=116.2;query 59-183;description=MOSC; hypothetical protein 4289921..4290673 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763052 YP_005235027.1 CDS STMMW_40221 NC_016854.1 4290685 4291080 D hypothetical protein 4290685..4291080 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763053 YP_005235028.1 CDS STMMW_40231 NC_016854.1 4291131 4292504 R pfam_scan;Pfam:PF00672; E()=1.0E-13;score=50.5;query165-233;description=HAMP; pfam_scan;Pfam:PF02518; E()=3.3E-30;score=103.7;query 346-453;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.5E-15;score=56.4;query239-299;description=HisKA; tmhmm; query 1-458; two-component sensor kinase protein complement(4291131..4292504) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763054 YP_005235029.1 CDS STMMW_40241 NC_016854.1 4292501 4293199 R pfam_scan;Pfam:PF00486; E()=3.0E-21;score=74.2;query152- 228;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=7.2E-32;score=109.4;query 4-112;description=Response_reg; two-component response regulatory protein complement(4292501..4293199) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763055 YP_005235030.1 CDS STMMW_40251 NC_016854.1 4293350 4293850 D Signal peptide; signalp; query 1-22;cleavage_site_probability=1.000; 1.000; extracytoplasmic stress protein for protein-mediated toxicities 4293350..4293850 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763056 YP_005235031.1 CDS STMMW_40261 NC_016854.1 4293998 4294900 D pfam_scan;Pfam:PF01545; E()=2.9E-81;score=272.4;query 14-289;description=Cation_efflux; tmhmm; query 1-301; putative transmembrane efflux protein 4293998..4294900 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763057 YP_005235032.1 CDS STMMW_40271 NC_016854.1 4295085 4296047 D pfam_scan;Pfam:PF00365; E()=8.9E-131;score=434.9;query 3-278;description=PFK; 6-phosphofructokinase 4295085..4296047 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763058 YP_005235033.1 CDS STMMW_40281 NC_016854.1 4296251 4297240 D pfam_scan;Pfam:PF01547; E()=3.4E-17;score=62.6;query33-272;description=SBP_bac_1; periplasmic sulfate binding protein 4296251..4297240 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763059 YP_005235034.1 CDS STMMW_40291 NC_016854.1 4297341 4298096 D pfam_scan;Pfam:PF02611; E()=6.3E-107;score=355.9;query 1-248;description=CDH; tmhmm; query 1-252; CDP-diglyceride hydrolase 4297341..4298096 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763060 YP_005235035.1 CDS STMMW_40301 NC_016854.1 4298359 4299693 D pfam_scan;Pfam:PF07690; E()=1.1E-12;score=47.6;query28-366;description=MFS_1; tmhmm; query 1-445; putative sugar transport protein 4298359..4299693 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763061 YP_005235036.1 CDS STMMW_40311 NC_016854.1 4299704 4300663 D pfam_scan;Pfam:PF00294; E()=2.5E-64;score=217.0;query 4-298;description=PfkB; putative carbohydrate kinase 4299704..4300663 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763062 YP_005235037.1 CDS STMMW_40321 NC_016854.1 4300673 4301713 D pfam_scan;Pfam:PF03747; E()=1.4E-61;score=208.2;query 10-324;description=ADP_ribosyl_GH; hypothetical protein 4300673..4301713 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763063 YP_005235038.1 CDS STMMW_40331 NC_016854.1 4301776 4302498 D pfam_scan;Pfam:PF00392; E()=2.4E-11;score=43.1;query12-74;description=GntR; pfam_scan;Pfam:PF07702; E()=5.2E-24;score=84.3;query100-233;description=UTRA; GntR family transcriptional regulator 4301776..4302498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763064 YP_005235039.1 CDS STMMW_40341 NC_016854.1 4302596 4302760 D tmhmm; query 1-55; hypothetical protein 4302596..4302760 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763065 YP_005235040.1 CDS STMMW_40361 NC_016854.1 4302997 4303263 R pfam_scan;Pfam:PF07883; E()=3.2E-19;score=67.9;query3-70;description=Cupin_2; hypothetical protein complement(4302997..4303263) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763067 YP_005235041.1 CDS STMMW_40371 NC_016854.1 4303361 4304953 R pfam_scan;Pfam:PF02782; E()=9.9E-20;score=70.8;query303-467;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=1.7E-52;score=177.8;query 13-260;description=FGGY_N; putative sugar kinase complement(4303361..4304953) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763068 YP_005235042.1 CDS STMMW_40381 NC_016854.1 4305041 4306000 R pfam_scan;Pfam:PF04198; E()=6.2E-66;score=221.6;query 66-314;description=Sugar-bind; putative regulatory protein complement(4305041..4306000) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763069 YP_005235043.1 CDS STMMW_40391 NC_016854.1 4306256 4307791 D pfam_scan;Pfam:PF00005; E()=8.8E-38;score=130.0;query 37-200;description=ABC_tran; putative ABC transporter ATP-binding protein 4306256..4307791 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763070 YP_005235044.1 CDS STMMW_40401 NC_016854.1 4307785 4308828 D pfam_scan;Pfam:PF02653; E()=2.3E-47;score=161.2;query 40-301;description=BPD_transp_2; tmhmm; query 1-348; ABC transporter permease 4307785..4308828 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763071 YP_005235045.1 CDS STMMW_40411 NC_016854.1 4308825 4309826 D pfam_scan;Pfam:PF02653; E()=1.6E-53;score=181.4;query 40-308;description=BPD_transp_2; tmhmm; query 1-334; putative ABC transporter, membrane component 4308825..4309826 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763072 YP_005235046.1 CDS STMMW_40421 NC_016854.1 4309855 4310877 D Signal peptide; signalp; query 1-27;cleavage_site_probability=0.994; 1.000; putative ABC transport protein, solute-binding component 4309855..4310877 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763073 YP_005235047.1 CDS STMMW_40431 NC_016854.1 4310906 4311781 D pfam_scan;Pfam:PF01791; E()=6.6E-17;score=61.2;query51-259;description=DeoC; putative aldolase 4310906..4311781 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763074 YP_005235048.1 CDS STMMW_40441 NC_016854.1 4311825 4312154 D pfam_scan;Pfam:PF03992; E()=5.7E-18;score=64.2;query14-89;description=ABM; hypothetical protein 4311825..4312154 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763075 YP_005235049.1 CDS STMMW_40451 NC_016854.1 4312164 4312928 D pfam_scan;Pfam:PF00834; E()=1.7E-29;score=102.1;query 24-227;description=Ribul_P_3_epim; tmhmm; query 1-255; putative ribulose-phosphate 3-epimerase 4312164..4312928 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763076 YP_005235050.1 CDS STMMW_40461 NC_016854.1 4313020 4313787 R pfam_scan;Pfam:PF00121; E()=2.0E-95;score=318.0;query 5-246;description=TIM; triosephosphate isomerase complement(4313020..4313787) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763077 YP_005235051.1 CDS STMMW_40471 NC_016854.1 4313900 4314496 R pfam_scan;Pfam:PF07305; E()=2.8E-102;score=339.8;query 1-198;description=DUF1454; hypothetical protein complement(4313900..4314496) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763078 YP_005235052.1 CDS STMMW_40481 NC_016854.1 4314597 4315025 D pfam_scan;Pfam:PF05656; E()=1.9E-18;score=65.9;query7-133;description=DUF805; tmhmm; query 1-143; hypothetical protein 4314597..4315025 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763079 YP_005235053.1 CDS STMMW_40491 NC_016854.1 4315132 4315878 R pfam_scan;Pfam:PF00175; E()=1.8E-13;score=50.3;query111- 223;description=NAD_binding_1; pfam_scan;Pfam:PF00970; E()=1.9E-9;score=37.0;query 16-90;description=FAD_binding_6; ferredoxin--NADP reductase complement(4315132..4315878) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763080 YP_005235054.1 CDS STMMW_40501 NC_016854.1 4315975 4316985 R pfam_scan;Pfam:PF03320; E()=1.9E-134;score=447.0;query 3-322;description=FBPase_glpX; putative glycerol metabolic protein complement(4315975..4316985) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763081 YP_005235055.1 CDS STMMW_40511 NC_016854.1 4317097 4318605 R pfam_scan;Pfam:PF02782; E()=2.9E-45;score=154.1;query 263-451;description=FGGY_C; pfam_scan;Pfam:PF00370; E()=3.3E-88;score=294.7;query 6-253;description=FGGY_N; glycerol kinase complement(4317097..4318605) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763082 YP_005235056.1 CDS STMMW_40521 NC_016854.1 4318626 4319471 R pfam_scan;Pfam:PF00230; E()=8.4E-66;score=221.3;query 3-251;description=MIP; tmhmm; query 1-282; glycerol uptake facilitator protein complement(4318626..4319471) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763083 YP_005235057.1 CDS STMMW_40531 NC_016854.1 4319870 4320109 D pfam_scan;Pfam:PF06005; E()=7.4E-28;score=96.0;query1-79;description=DUF904; hypothetical protein 4319870..4320109 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763084 YP_005235058.1 CDS STMMW_40541 NC_016854.1 4320331 4320816 R pfam_scan;Pfam:PF03737; E()=5.7E-58;score=194.7;query 1-152;description=Methyltransf_6; menaquinone biosynthesis protein complement(4320331..4320816) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763085 YP_005235059.1 CDS STMMW_40551 NC_016854.1 4320909 4321838 R pfam_scan;Pfam:PF01040; E()=2.7E-34;score=118.4;query 22-279;description=UbiA; tmhmm; query 1-310; menaquinone biosynthetic protein complement(4320909..4321838) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763086 YP_005235060.1 CDS STMMW_40561 NC_016854.1 4321905 4323236 R pfam_scan;Pfam:PF00004; E()=1.2E-7;score=31.4;query 53-107;description=AAA; pfam_scan;Pfam:PF07724; E()=4.7E-21;score=74.9;query191-327;description=AAA_2; heat shock protein complement(4321905..4323236) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763087 YP_005235061.1 CDS STMMW_40571 NC_016854.1 4323246 4323776 R pfam_scan;Pfam:PF00227; E()=6.4E-25;score=87.3;query2-167;description=Proteasome; heat shock protein complement(4323246..4323776) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763088 YP_005235062.1 CDS STMMW_40581 NC_016854.1 4323868 4324842 R pfam_scan;Pfam:PF05036; E()=2.5E-17;score=62.2;query251-318;description=SPOR; tmhmm; query 1-325; cell division protein complement(4323868..4324842) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763089 YP_005235063.1 CDS STMMW_40591 NC_016854.1 4324936 4325961 R pfam_scan;Pfam:PF00356; E()=1.5E-16;score=59.6;query11-56;description=LacI; pfam_scan;Pfam:PF00532; E()=2.9E-35;score=121.3;query 68-315;description=Peripla_BP_1; transcriptional repressor complement(4324936..4325961) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763090 YP_005235064.1 CDS STMMW_40601 NC_016854.1 4326116 4328314 R pfam_scan;Pfam:PF00271; E()=4.8E-7;score=28.8;query 504-589;description=Helicase_C; pfam_scan;Pfam:PF00270; E()=6.2E-24;score=84.2;query203-363;description=DEAD; primosomal protein replication factor complement(4326116..4328314) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763091 YP_005235065.1 CDS STMMW_40611 NC_016854.1 4328518 4328730 D pfam_scan;Pfam:PF01197; E()=3.2E-31;score=106.3;query 1-65;description=Ribosomal_L31; 50S ribosomal protein L31 4328518..4328730 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763092 YP_005235066.1 CDS STMMW_40621 NC_016854.1 4328776 4329438 R pfam_scan;Pfam:PF09601; E()=5.8E-46;score=155.6;query 36-200;description=DUF2459; hypothetical protein complement(4328776..4329438) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763093 YP_005235067.1 CDS STMMW_40631 NC_016854.1 4329639 4331429 R pfam_scan;Pfam:PF05935; E()=4.9E-183;score=608.8;query 49-584;description=Arylsulfotrans; tmhmm; query 1-597; putative arylsulfate sulfotransferase complement(4329639..4331429) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763094 YP_005235068.1 CDS STMMW_40641 NC_016854.1 4331886 4332203 R pfam_scan;Pfam:PF01340; E()=5.2E-69;score=228.7;query 2-105;description=MetJ; repressor of the methionine regulon complement(4331886..4332203) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763095 YP_005235069.1 CDS STMMW_40651 NC_016854.1 4332468 4333628 D pfam_scan;Pfam:PF01053; E()=2.3E-145;score=483.6;query 6-380;description=Cys_Met_Meta_PP; cystathionine gamma-synthase 4332468..4333628 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763096 YP_005235070.1 CDS STMMW_40661 NC_016854.1 4333631 4336063 D pfam_scan;Pfam:PF00696; E()=4.7E-43;score=147.2;query 13-283;description=AA_kinase; pfam_scan;Pfam:PF00742; E()=7.3E-45;score=152.6;query 608-803;description=Homoserine_dh; pfam_scan;Pfam:PF03447; E()=4.0E-17;score=62.2;query465- 599;description=NAD_binding_3; bifunctional aspartokinase II/homoserine dehydrogenase IIcan I write 4333631..4336063 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763097 YP_005235071.1 CDS STMMW_40671 NC_016854.1 4336179 4337036 R pfam_scan;Pfam:PF05552; E()=2.1E-13;score=49.0;query15-65;description=TM_helix; pfam_scan;Pfam:PF00924; E()=2.2E-61;score=206.4;query 71-269;description=MS_channel; inner membrane protein complement(4336179..4337036) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763098 YP_005235072.1 CDS STMMW_40681 NC_016854.1 4337039 4338037 R tmhmm; query 1-333; inner membrane protein complement(4337039..4338037) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763099 YP_005235073.1 CDS STMMW_40691 NC_016854.1 4338272 4339396 R hypothetical protein complement(4338272..4339396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763100 YP_005235074.1 CDS STMMW_40701 NC_016854.1 4339532 4341088 D pfam_scan;Pfam:PF00149; E()=6.9E-16;score=57.3;query24- 252;description=Metallophos; pfam_scan;Pfam:PF02872; E()=4.2E-44;score=149.7;query 329-476;description=5_nucleotid_C; hypothetical protein 4339532..4341088 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763101 YP_005235075.1 CDS STMMW_40711 NC_016854.1 4341283 4342173 D pfam_scan;Pfam:PF02219; E()=2.6E-108;score=360.9;query 14-291;description=MTHFR; 5,10 methylenetetrahydrofolate reductase 4341283..4342173 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763102 YP_005235076.1 CDS STMMW_40721 NC_016854.1 4342338 4344518 D pfam_scan;Pfam:PF00141; E()=8.9E-31;score=106.6;query 95-395;description=peroxidase; catalase (hydroperoxidase I) 4342338..4344518 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763103 YP_005235077.1 CDS STMMW_40731 NC_016854.1 4344576 4345199 R pfam_scan;Pfam:PF06940; E()=5.9E-77;score=256.4;query 41-204;description=DUF1287; hypothetical protein complement(4344576..4345199) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763104 YP_005235078.1 CDS STMMW_40741 NC_016854.1 4345458 4346561 R pfam_scan;Pfam:PF00465; E()=6.1E-57;score=192.6;query 8-348;description=Fe-ADH; glycerol dehydrogenase complement(4345458..4346561) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763105 YP_005235079.1 CDS STMMW_40751 NC_016854.1 4346573 4347235 R pfam_scan;Pfam:PF00923; E()=4.3E-49;score=166.5;query 3-206;description=Transaldolase; putative transaldolase complement(4346573..4347235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763106 YP_005235080.1 CDS STMMW_40761 NC_016854.1 4347246 4349747 R pfam_scan;Pfam:PF00359; E()=1.8E-35;score=121.4;query 689-829;description=PTS_EIIA_2; pfam_scan;Pfam:PF00381; E()=9.7E-15;score=54.0;query6-86;description=PTS-HPr; pfam_scan;Pfam:PF05524; E()=8.5E-13;score=48.4;query120-238;description=PEP- utilisers_N; pfam_scan;Pfam:PF00391; E()=2.1E-19;score=68.4;query262-337;description=PEP- utilizers; pfam_scan;Pfam:PF02896; E()=2.2E-114;score=381.1;query 363-653;description=PEP-utilizers_C; phosphoenolpyruvate-protein phosphotransferase complement(4347246..4349747) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763107 YP_005235081.1 CDS STMMW_40771 NC_016854.1 4350056 4351135 D tmhmm; query 1-360; PTS system, protein component IIC (phosphotransferase enzyme ii, c component) 4350056..4351135 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763108 YP_005235082.1 CDS STMMW_40781 NC_016854.1 4351150 4351470 D pfam_scan;Pfam:PF02302; E()=2.4E-23;score=82.2;query6-96;description=PTS_IIB; PTS system protein IIB component 1 (phosphotransferase enzyme ii, b component) 4351150..4351470 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763109 YP_005235083.1 CDS STMMW_40791 NC_016854.1 4351569 4353866 D pfam_scan;Pfam:PF02901; E()=2.5E-197;score=656.6;query 2-626;description=PFL; pfam_scan;Pfam:PF01228; E()=2.1E-30;score=104.4;query 645-747;description=Gly_radical; formate acetyltransferase 2 4351569..4353866 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763110 YP_005235084.1 CDS STMMW_40801 NC_016854.1 4353832 4354710 D pfam_scan;Pfam:PF04055; E()=1.7E-15;score=56.9;query42- 222;description=Radical_SAM; pyruvate formate-lyase 2 activating enzyme 4353832..4354710 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763111 YP_005235085.1 CDS STMMW_40811 NC_016854.1 4354712 4355065 D pfam_scan;Pfam:PF02302; E()=4.6E-17;score=62.1;query9-99;description=PTS_IIB; PTS system, component IIB 4354712..4355065 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763112 YP_005235086.1 CDS STMMW_40821 NC_016854.1 4355052 4355903 R pfam_scan;Pfam:PF00165; E()=8.8E-12;score=44.3;query234-269;description=HTH_AraC; putative AraC family transcriptional regulator complement(4355052..4355903) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763113 YP_005235087.1 CDS STMMW_40831 NC_016854.1 4356064 4357797 R pfam_scan;Pfam:PF00884; E()=1.2E-57;score=194.7;query 238-536;description=Sulfatase; tmhmm; query 1-578; hypothetical protein complement(4356064..4357797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763114 YP_005235088.1 CDS STMMW_40841 NC_016854.1 4358008 4360659 R pfam_scan;Pfam:PF00311; E()=1.1E-41;score=142.5;query 450-829;description=PEPcase; phosphoenolpyruvate carboxylase complement(4358008..4360659) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763115 YP_005235089.1 CDS STMMW_40851 NC_016854.1 4361028 4362179 R pfam_scan;Pfam:PF07687; E()=5.4E-25;score=86.7;query178-287;description=M20_dimer; pfam_scan;Pfam:PF01546; E()=9.7E-35;score=119.9;query 76-377;description=Peptidase_M20; acetylornithine deacetylase complement(4361028..4362179) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763116 YP_005235090.1 CDS STMMW_40861 NC_016854.1 4362268 4363272 D pfam_scan;Pfam:PF01118; E()=7.7E-33;score=113.1;query 5-145;description=Semialdhyde_dh; pfam_scan;Pfam:PF02774; E()=2.0E-22;score=79.5;query163- 311;description=Semialdhyde_dhC; N-acetyl-gamma-glutamyl-phosphate reductase 4362268..4363272 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763117 YP_005235091.1 CDS STMMW_40871 NC_016854.1 4363280 4364056 D pfam_scan;Pfam:PF00696; E()=5.7E-43;score=146.9;query 5-235;description=AA_kinase; acetylglutamate kinase 4363280..4364056 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763118 YP_005235092.1 CDS STMMW_40881 NC_016854.1 4364174 4365550 D pfam_scan;Pfam:PF00206; E()=1.2E-103;score=346.0;query 6-301;description=Lyase_1; argininosuccinate lyase 4364174..4365550 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763119 YP_005235093.1 CDS STMMW_40891 NC_016854.1 4365835 4366752 D pfam_scan;Pfam:PF00126; E()=1.8E-20;score=72.1;query3-61;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.4E-54;score=184.0;query 89-293;description=LysR_substrate; hydrogen peroxide-inducible regulon activator 4365835..4366752 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763120 YP_005235094.1 CDS STMMW_40901 NC_016854.1 4366735 4368135 R pfam_scan;Pfam:PF07992; E()=1.2E-46;score=159.1;query 8-314;description=Pyr_redox_2; pfam_scan;Pfam:PF02852; E()=3.9E-28;score=97.1;query346- 457;description=Pyr_redox_dim; pfam_scan;Pfam:PF00070; E()=5.5E-20;score=71.3;query178-270;description=Pyr_redox; pyridine nucleotide-disulfide oxidoreductase complement(4366735..4368135) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763121 YP_005235095.1 CDS STMMW_40911 NC_016854.1 4368334 4368969 D pfam_scan;Pfam:PF00440; E()=8.3E-10;score=37.8;query17-60;description=TetR_N; TetR family transcriptional regulatory protein 4368334..4368969 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763122 YP_005235096.1 CDS STMMW_40921 NC_016854.1 4368985 4369344 D pfam_scan;Pfam:PF07226; E()=7.7E-55;score=183.0;query 2-115;description=DUF1422; tmhmm; query 1-120; hypothetical protein 4368985..4369344 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763123 YP_005235097.1 CDS STMMW_40931 NC_016854.1 4369391 4370491 R pfam_scan;Pfam:PF05958; E()=4.4E-188;score=624.1;query 10-365;description=tRNA_U5-meth_tr; tRNA (uracil-5)-methyltransferase complement(4369391..4370491) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763124 YP_005235098.1 CDS STMMW_40941 NC_016854.1 4370865 4372709 D pfam_scan;Pfam:PF07715; E()=1.4E-31;score=108.4;query 41-146;description=Plug; pfam_scan;Pfam:PF00593; E()=6.6E-41;score=140.6;query 390-614;description=TonB_dep_Rec; vitamin B12 receptor protein 4370865..4372709 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763125 YP_005235099.1 CDS STMMW_40951 NC_016854.1 4372753 4373505 D pfam_scan;Pfam:PF01177; E()=1.3E-27;score=96.4;query2- 202;description=Asp_Glu_race; glutamate racemase 4372753..4373505 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763126 YP_005235100.1 CDS STMMW_40961 NC_016854.1 4379423 4380451 D pfam_scan;Pfam:PF02873; E()=2.9E-35;score=119.6;query 204-330;description=MurB_C; pfam_scan;Pfam:PF01565; E()=9.9E-21;score=73.9;query18- 145;description=FAD_binding_4; UDP-N-acetylenolpyruvoylglucosamine reductase 4379423..4380451 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763132 YP_005235101.1 CDS STMMW_40971 NC_016854.1 4380448 4381410 D pfam_scan;Pfam:PF02237; E()=1.0E-11;score=43.9;query271-317;description=BPL_C; pfam_scan;Pfam:PF03099; E()=1.8E-21;score=75.9;query87- 208;description=BPL_LplA_LipB; pfam_scan;Pfam:PF08279; E()=5.8E-12;score=44.7;query10-58;description=HTH_11; bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase 4380448..4381410 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763133 YP_005235102.1 CDS STMMW_40981 NC_016854.1 4381445 4382395 R pfam_scan;Pfam:PF00485; E()=1.1E-13;score=50.8;query90-244;description=PRK; pantothenate kinase complement(4381445..4382395) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763134 YP_005235103.1 CDS STMMW_40991 NC_016854.1 4383354 4384538 D pfam_scan;Pfam:PF03143; E()=8.3E-42;score=140.9;query 298-392;description=GTP_EFTU_D3; pfam_scan;Pfam:PF03144; E()=2.1E-22;score=78.5;query225- 294;description=GTP_EFTU_D2; pfam_scan;Pfam:PF00009; E()=5.2E-68;score=228.0;query 10-201;description=GTP_EFTU; elongation factor Tu 4383354..4384538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763135 YP_005235104.1 CDS STMMW_41001 NC_016854.1 4384723 4385151 D pfam_scan;Pfam:PF00584; E()=1.2E-20;score=72.3;query83-138;description=SecE; tmhmm; query 1-143; preprotein translocase subunit SecE 4384723..4385151 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763136 YP_005235105.1 CDS STMMW_41011 NC_016854.1 4385153 4385698 D pfam_scan;Pfam:PF00467; E()=3.3E-8;score=32.9;query 130-159;description=KOW; pfam_scan;Pfam:PF02357; E()=5.0E-26;score=90.5;query7-106;description=NusG; transcription antitermination protein 4385153..4385698 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759569 YP_005235106.1 CDS STMMW_41021 NC_016854.1 4385856 4386284 D pfam_scan;Pfam:PF00298; E()=1.5E-29;score=101.0;query 72-140;description=Ribosomal_L11; pfam_scan;Pfam:PF03946; E()=2.2E-32;score=109.8;query 8-67;description=Ribosomal_L11_N; 50S ribosomal protein L11 4385856..4386284 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759570 YP_005235107.1 CDS STMMW_41031 NC_016854.1 4386288 4386992 D pfam_scan;Pfam:PF00687; E()=3.7E-94;score=313.8;query 15-221;description=Ribosomal_L1; 50S ribosomal protein L1 4386288..4386992 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763137 YP_005235108.1 CDS STMMW_41041 NC_016854.1 4387412 4387909 D pfam_scan;Pfam:PF00466; E()=2.5E-29;score=100.8;query 4-101;description=Ribosomal_L10; 50S ribosomal protein L10 4387412..4387909 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763138 YP_005235109.1 CDS STMMW_41051 NC_016854.1 4387976 4388341 D pfam_scan;Pfam:PF00542; E()=7.6E-31;score=105.7;query 54-121;description=Ribosomal_L12; 50S ribosomal protein L7/L12 4387976..4388341 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763139 YP_005235110.1 CDS STMMW_41061 NC_016854.1 4388659 4392687 D pfam_scan;Pfam:PF04560; E()=7.4E-34;score=115.1;query 1266-1341;description=RNA_pol_Rpb2_7; pfam_scan;Pfam:PF04565; E()=5.2E-30;score=102.1;query 513-582;description=RNA_pol_Rpb2_3; pfam_scan;Pfam:PF00562; E()=3.1E-148;score=493.4;query 716-1264;description=RNA_pol_Rpb2_6; pfam_scan;Pfam:PF04561; E()=1.1E-7;score=31.5;query 151-232;description=RNA_pol_Rpb2_2; pfam_scan;Pfam:PF10385; E()=1.3E-27;score=94.8;query591- 656;description=RNA_pol_Rpb2_45; pfam_scan;Pfam:PF04563; E()=2.8E-27;score=95.0;query27- 509;description=RNA_pol_Rpb2_1; DNA-directed RNA polymerase, beta-subunit 4388659..4392687 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763140 YP_005235111.1 CDS STMMW_41071 NC_016854.1 4392764 4396987 D pfam_scan;Pfam:PF04983; E()=2.8E-27;score=95.7;query489- 644;description=RNA_pol_Rpb1_3; pfam_scan;Pfam:PF04997; E()=4.2E-93;score=311.7;query 15-342;description=RNA_pol_Rpb1_1; pfam_scan;Pfam:PF05000; E()=3.5E-21;score=74.9;query674- 764;description=RNA_pol_Rpb1_4; pfam_scan;Pfam:PF04998; E()=6.3E-77;score=258.2;query 766-1321;description=RNA_pol_Rpb1_5; pfam_scan;Pfam:PF00623; E()=5.5E-49;score=165.9;query 344-486;description=RNA_pol_Rpb1_2; DNA-directed RNA polymerase, beta'-subunit 4392764..4396987 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763141 YP_005235112.1 CDS STMMW_41081 NC_016854.1 4397029 4397352 D tmhmm; query 1-108; putative inner membrane protein 4397029..4397352 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763142 YP_005235113.1 CDS STMMW_41091 NC_016854.1 4397358 4397702 R hypothetical protein complement(4397358..4397702) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763143 YP_005235114.1 CDS STMMW_41101 NC_016854.1 4398101 4399111 D hypothetical protein 4398101..4399111 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763144 YP_005235115.1 CDS STMMW_41111 NC_016854.1 4399434 4399622 D hypothetical protein 4399434..4399622 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763145 YP_005235116.1 CDS STMMW_41121 NC_016854.1 4399773 4400906 R pfam_scan;Pfam:PF06968; E()=1.3E-18;score=66.2;query256-361;description=BATS; thiamine biosynthesis protein complement(4399773..4400906) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763146 YP_005235117.1 CDS STMMW_41131 NC_016854.1 4400903 4401673 R pfam_scan;Pfam:PF05690; E()=5.4E-109;score=362.7;query 4-247;description=ThiG; thiamine biosynthesis protein complement(4400903..4401673) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763147 YP_005235118.1 CDS STMMW_41141 NC_016854.1 4401675 4401875 R pfam_scan;Pfam:PF02597; E()=7.6E-16;score=58.1;query3-66;description=ThiS; thiamine biosynthesis protein complement(4401675..4401875) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763148 YP_005235119.1 CDS STMMW_41151 NC_016854.1 4401856 4402614 R pfam_scan;Pfam:PF00899; E()=1.5E-47;score=160.4;query 28-160;description=ThiF; pfam_scan;Pfam:PF05237; E()=1.4E-27;score=95.0;query167-246;description=MoeZ_MoeB; tmhmm; query 1-253; thiamine biosynthesis protein complement(4401856..4402614) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763149 YP_005235120.1 CDS STMMW_41161 NC_016854.1 4402607 4403242 R pfam_scan;Pfam:PF02581; E()=3.1E-54;score=182.5;query 20-189;description=TMP-TENI; thiamine-phosphate pyrophosphorylase complement(4402607..4403242) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763150 YP_005235121.1 CDS STMMW_41171 NC_016854.1 4403242 4405137 R pfam_scan;Pfam:PF01964; E()=3.2E-197;score=654.7;query 148-597;description=ThiC; thiamine biosynthesis protein complement(4403242..4405137) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763151 YP_005235122.1 CDS STMMW_41181 NC_016854.1 4405501 4405989 R pfam_scan;Pfam:PF04353; E()=1.0E-48;score=164.3;query 1-149;description=Rsd_AlgQ; putative regulatory protein complement(4405501..4405989) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763152 YP_005235123.1 CDS STMMW_41191 NC_016854.1 4406082 4406855 D pfam_scan;Pfam:PF09296; E()=6.1E-10;score=38.8;query11-91;description=NUDIX-like; pfam_scan;Pfam:PF00293; E()=1.9E-25;score=88.8;query130-242;description=NUDIX; pfam_scan;Pfam:PF09297; E()=6.8E-12;score=43.9;query93-124;description=zf-NADH- PPase; hypothetical protein 4406082..4406855 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763153 YP_005235124.1 CDS STMMW_41201 NC_016854.1 4406896 4407960 D pfam_scan;Pfam:PF01208; E()=4.8E-149;score=495.3;query 5-347;description=URO-D; uroporphyrinogen decarboxylase 4406896..4407960 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763154 YP_005235125.1 CDS STMMW_41211 NC_016854.1 4407970 4408641 D pfam_scan;Pfam:PF04493; E()=4.2E-72;score=241.5;query 9-208;description=Endonuclease_5; putative endonuclease V 4407970..4408641 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763155 YP_005235126.1 CDS STMMW_41221 NC_016854.1 4408683 4409273 D pfam_scan;Pfam:PF04222; E()=7.3E-49;score=163.9;query 29-140;description=DUF416; hypothetical protein 4408683..4409273 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763156 YP_005235127.1 CDS STMMW_41231 NC_016854.1 4409460 4409732 D pfam_scan;Pfam:PF00216; E()=9.9E-34;score=114.8;query 1-90;description=Bac_DNA_binding; histone like DNA-binding protein HU-alpha (NS2) (HU-2) 4409460..4409732 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763157 YP_005235128.1 CDS STMMW_41241 NC_016854.1 4409744 4410436 D pfam_scan;Pfam:PF07356; E()=2.4E-71;score=239.0;query 42-226;description=DUF1481; hypothetical protein 4409744..4410436 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763158 YP_005235129.1 CDS STMMW_41251 NC_016854.1 4410478 4410933 R tmhmm; query 1-152; hypothetical protein complement(4410478..4410933) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763159 YP_005235130.1 CDS STMMW_41261 NC_016854.1 4411187 4412584 D pfam_scan;Pfam:PF02518; E()=6.1E-31;score=106.0;query 355-459;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=1.3E-13;score=50.2;query247-308;description=HisKA; tmhmm; query 1-466; two-component system sensor protein 4411187..4412584 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763160 YP_005235131.1 CDS STMMW_41271 NC_016854.1 4412590 4413915 D pfam_scan;Pfam:PF00158; E()=3.0E-75;score=251.2;query 141-308;description=Sigma54_activat; pfam_scan;Pfam:PF02954; E()=2.0E-14;score=52.4;query403-440;description=HTH_8; pfam_scan;Pfam:PF00072; E()=9.7E-34;score=115.4;query 8-117;description=Response_reg; transcriptional regulator 4412590..4413915 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763161 YP_005235132.1 CDS STMMW_41281 NC_016854.1 4413912 4415201 R pfam_scan;Pfam:PF02844; E()=5.8E-38;score=128.9;query 1-102;description=GARS_N; pfam_scan;Pfam:PF01071; E()=8.8E-89;score=295.9;query 103-296;description=GARS_A; pfam_scan;Pfam:PF02843; E()=3.5E-29;score=100.1;query 330-423;description=GARS_C; phosphoribosylglycineamide synthetase complement(4413912..4415201) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763162 YP_005235133.1 CDS STMMW_41291 NC_016854.1 4415213 4416802 R pfam_scan;Pfam:PF02142; E()=1.6E-28;score=98.1;query19-132;description=MGS; pfam_scan;Pfam:PF01808; E()=1.1E-143;score=477.5;query 137-461;description=AICARFT_IMPCHas; phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase (bifunctional enzyme) complement(4415213..4416802) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763163 YP_005235134.1 CDS STMMW_41301 NC_016854.1 4422956 4423393 R pfam_scan;Pfam:PF00583; E()=1.6E-13;score=50.1;query58- 123;description=Acetyltransf_1; putative acetyltransferase complement(4422956..4423393) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763168 YP_005235135.1 CDS STMMW_41311 NC_016854.1 4423550 4424479 D pfam_scan;Pfam:PF04204; E()=1.6E-133;score=443.8;query 2-299;description=HTS; homoserine O-succinyltransferase 4423550..4424479 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763169 YP_005235136.1 CDS STMMW_41321 NC_016854.1 4424748 4426349 D pfam_scan;Pfam:PF01274; E()=6.5E-232;score=770.0;query 12-532;description=Malate_synthase; malate synthase A 4424748..4426349 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763170 YP_005235137.1 CDS STMMW_41331 NC_016854.1 4426381 4427685 D pfam_scan;Pfam:PF00463; E()=3.6E-110;score=368.2;query 7-257;description=ICL; isocitrate lyase 4426381..4427685 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763171 YP_005235138.1 CDS STMMW_41341 NC_016854.1 4427787 4429538 D pfam_scan;Pfam:PF06315; E()=1.7E-244;score=811.6;query 9-568;description=AceK; isocitrate dehydrogenase kinase/phosphatase 4427787..4429538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763172 YP_005235139.1 CDS STMMW_41351 NC_016854.1 4429502 4429936 R pfam_scan;Pfam:PF04266; E()=9.2E-25;score=86.4;query29-140;description=ASCH; hypothetical protein complement(4429502..4429936) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763173 YP_005235140.1 CDS STMMW_41361 NC_016854.1 4429920 4430744 R pfam_scan;Pfam:PF01614; E()=1.8E-39;score=134.2;query 145-267;description=IclR; pfam_scan;Pfam:PF09339; E()=3.0E-18;score=64.9;query26-76;description=HTH_IclR; acetate operon repressor complement(4429920..4430744) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759572 YP_005235141.1 CDS STMMW_41371 NC_016854.1 4430961 4434731 D pfam_scan;Pfam:PF02607; E()=1.9E-25;score=88.1;query688-768;description=B12- binding_2; pfam_scan;Pfam:PF02965; E()=2.5E-45;score=152.8;query 1084-1221;description=Met_synt_B12; pfam_scan;Pfam:PF02310; E()=7.9E-22;score=76.6;query776-867;description=B12- binding; pfam_scan;Pfam:PF00809; E()=1.3E-45;score=155.0;query 385-598;description=Pterin_bind; pfam_scan;Pfam:PF02574; E()=1.1E-110;score=369.1;query 45-355;description=S-methyl_trans; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase 4430961..4434731 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763174 YP_005235142.1 CDS STMMW_41381 NC_016854.1 4435073 4436629 D permease domain; pfam_scan;Pfam:PF02690; E()=1.0E-33;score=115.8;query 2-124;description=Na_Pi_cotrans; tmhmm; query 1-519; putative transport protein 4435073..4436629 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759571 YP_005235143.1 CDS STMMW_41391 NC_016854.1 4436705 4437394 R pfam_scan;Pfam:PF03575; E()=3.0E-49;score=166.2;query 49-201;description=Peptidase_S51; peptidase E (pseudogene) complement(4436705..4437394) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763177 YP_005235144.1 CDS STMMW_41401 NC_016854.1 4437466 4437567 D hypothetical protein 4437466..4437567 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763178 YP_005235145.1 CDS STMMW_41411 NC_016854.1 4437602 4438141 D pfam_scan;Pfam:PF09831; E()=2.1E-58;score=196.5;query 5-179;description=DUF2058; hypothetical protein 4437602..4438141 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763179 YP_005235146.1 CDS STMMW_41421 NC_016854.1 4438188 4439057 D large ribosomal subunit; pfam_scan;Pfam:PF01479; E()=3.2E-11;score=42.2;query7-52;description=S4; pfam_scan;Pfam:PF00849; E()=1.6E-19;score=70.3;query69- 195;description=PseudoU_synth_2; putative pseudouridine synthase 4438188..4439057 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763180 YP_005235147.1 CDS STMMW_41431 NC_016854.1 4439054 4439353 R pfam_scan;Pfam:PF11656; E()=1.1E-38;score=130.6;query 12-99;description=ComReg_Spx; hypothetical protein complement(4439054..4439353) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763181 YP_005235148.1 CDS STMMW_41441 NC_016854.1 4439424 4440365 R similar to putative sodium dependent transport proteins; pfam_scan;Pfam:PF01758; E()=4.8E-44;score=149.6;query 36-214;description=SBF; tmhmm; query 1-314; hypothetical protein complement(4439424..4440365) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763182 YP_005235149.1 CDS STMMW_41461 NC_016854.1 4441551 4441841 R GtrA like domain; tmhmm; query 1-97; hypothetical protein complement(4441551..4441841) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763184 YP_005235150.1 CDS STMMW_41471 NC_016854.1 4442090 4442545 R glycosyl transferase domain; hypothetical protein complement(4442090..4442545) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763185 YP_005235151.1 CDS STMMW_41481 NC_016854.1 4442542 4443147 R hypothetical protein complement(4442542..4443147) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763186 YP_005235152.1 CDS STMMW_41491 NC_016854.1 4443152 4444897 R pfam_scan;Pfam:PF03406; E()=5.2E-19;score=67.2;query169- 210;description=Phage_fiber_2; bacteriophage protein complement(4443152..4444897) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763187 YP_005235153.1 CDS STMMW_41501 NC_016854.1 4444900 4445532 R pfam_scan;Pfam:PF09684; E()=1.1E-29;score=102.6;query 29-148;description=Tail_P2_I; bacteriophage protein complement(4444900..4445532) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763188 YP_005235154.1 CDS STMMW_41511 NC_016854.1 4445525 4446640 R pfam_scan;Pfam:PF04865; E()=7.0E-67;score=225.0;query 70-330;description=Baseplate_J; bacteriophage protein complement(4445525..4446640) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763189 YP_005235155.1 CDS STMMW_41521 NC_016854.1 4446631 4446990 R pfam_scan;Pfam:PF04965; E()=1.5E-12;score=47.0;query25-103;description=GPW_gp25; bacteriophage baseplate protein complement(4446631..4446990) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763190 YP_005235156.1 CDS STMMW_41531 NC_016854.1 4447154 4448701 R note similarity to GtrC and gene downstream gtrB; tmhmm; query 1-516; phage encoded membrane protein complement(4447154..4448701) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763191 YP_005235157.1 CDS STMMW_41541 NC_016854.1 4448701 4449630 R pfam_scan;Pfam:PF00535; E()=3.6E-27;score=94.5;query4- 167;description=Glycos_transf_2; tmhmm; query 1-310; putative phage glycosyl transferase complement(4448701..4449630) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763192 YP_005235158.1 CDS STMMW_41551 NC_016854.1 4449627 4449989 R pfam_scan;Pfam:PF04138; E()=2.4E-13;score=49.9;query7-116;description=GtrA; tmhmm; query 1-121; putative phage glycosyl transferase complement(4449627..4449989) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763193 YP_005235159.1 CDS STMMW_41571 NC_016854.1 4450317 4451039 R pfam_scan;Pfam:PF04717; E()=1.0E-17;score=63.4;query9-85;description=Phage_base_V; bacteriophage tail spike protein complement(4450317..4451039) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763194 YP_005235160.1 CDS STMMW_41581 NC_016854.1 4451049 4452092 R pfam_scan;Pfam:PF05954; E()=4.0E-94;score=314.9;query 16-341;description=Phage_GPD; bacteriophage protein complement(4451049..4452092) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763195 YP_005235161.1 CDS STMMW_41591 NC_016854.1 4452289 4453242 R pfam_scan;Pfam:PF06995; E()=6.2E-32;score=109.6;query 6-125;description=Phage_P2_GpU; bacteriophage protein complement(4452289..4453242) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763196 YP_005235162.1 CDS STMMW_41601 NC_016854.1 4453242 4455596 R pfam_scan;Pfam:PF10145; E()=8.4E-18;score=64.6;query117- 303;description=PhageMin_Tail; bacteriophage tail protein complement(4453242..4455596) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763197 YP_005235163.1 CDS STMMW_41611 NC_016854.1 4455781 4456098 R bacteriophage protein complement(4455781..4456098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763198 YP_005235164.1 CDS STMMW_41621 NC_016854.1 4456150 4456674 R pfam_scan;Pfam:PF04985; E()=7.4E-51;score=171.9;query 8-173;description=Phage_tube; bacteriophage tail tube protein complement(4456150..4456674) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763199 YP_005235165.1 CDS STMMW_41631 NC_016854.1 4456674 4458101 R pfam_scan;Pfam:PF04984; E()=4.3E-65;score=220.0;query 2-464;description=Phage_sheath_1; bacteriophage tail sheath protein complement(4456674..4458101) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763200 YP_005235166.1 CDS STMMW_41641 NC_016854.1 4458285 4458740 R pfam_scan;Pfam:PF09646; E()=1.5E-50;score=169.9;query 10-150;description=Gp37; bacteriophage protein complement(4458285..4458740) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763201 YP_005235167.1 CDS STMMW_41651 NC_016854.1 4458900 4459214 R tmhmm; query 1-105; bacteriophage protein complement(4458900..4459214) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763202 YP_005235168.1 CDS STMMW_41661 NC_016854.1 4459227 4459832 R pfam_scan;Pfam:PF01464; E()=1.5E-14;score=53.1;query55-150;description=SLT; bacteriophage endolysin complement(4459227..4459832) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763203 YP_005235169.1 CDS STMMW_41671 NC_016854.1 4459835 4460122 R tRNA synthetase class I domain; tmhmm; query 1-96; hypothetical protein complement(4459835..4460122) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763204 YP_005235170.1 CDS STMMW_41681 NC_016854.1 4460698 4461045 D regualate lyase production; pfam_scan;Pfam:PF08765; E()=3.4E-40;score=135.8;query 10-114;description=Mor; DNA-binding protein; DNA binding protein 4460698..4461045 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763205 YP_005235171.1 CDS STMMW_41691 NC_016854.1 4461178 4462527 R pfam_scan;Pfam:PF01842; E()=5.1E-5;score=23.0;query 323-374;description=ACT; pfam_scan;Pfam:PF00696; E()=9.1E-50;score=169.2;query 4-277;description=AA_kinase; lysine-sensitive aspartokinase III complement(4461178..4462527) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763206 YP_005235172.1 CDS STMMW_41701 NC_016854.1 4462872 4464521 D pfam_scan;Pfam:PF00342; E()=4.6E-238;score=790.1;query 52-541;description=PGI; glucose-6-phosphate isomerase 4462872..4464521 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763207 YP_005235173.1 CDS STMMW_41711 NC_016854.1 4464962 4465207 D pfam_scan;Pfam:PF11106; E()=5.0E-43;score=144.6;query 2-81;description=YjbE; tmhmm; query 1-82; hypothetical protein 4464962..4465207 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763208 YP_005235174.1 CDS STMMW_41721 NC_016854.1 4465241 4465909 D pfam_scan;Pfam:PF11102; E()=3.1E-56;score=189.8;query 23-216;description=DUF2886; putative lipoprotein 4465241..4465909 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763209 YP_005235175.1 CDS STMMW_41731 NC_016854.1 4465906 4466643 D pfam_scan;Pfam:PF06251; E()=1.5E-71;score=239.0;query 73-244;description=DUF1017; tmhmm; query 1-246; hypothetical protein 4465906..4466643 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763210 YP_005235176.1 CDS STMMW_41741 NC_016854.1 4466643 4468739 D pfam_scan;Pfam:PF06082; E()=2.3E-273;score=908.2;query 29-693;description=DUF940; putative lipoprotein 4466643..4468739 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763211 YP_005235177.1 CDS STMMW_41751 NC_016854.1 4468882 4469292 D pfam_scan;Pfam:PF06146; E()=2.9E-17;score=62.2;query62-123;description=PsiE; tmhmm; query 1-137; hypothetical protein 4468882..4469292 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763212 YP_005235178.1 CDS STMMW_41761 NC_016854.1 4469458 4470348 R pfam_scan;Pfam:PF00528; E()=3.3E-15;score=55.6;query112- 287;description=BPD_transp_1; tmhmm; query 1-297; maltose transport inner membrane protein complement(4469458..4470348) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763213 YP_005235179.1 CDS STMMW_41771 NC_016854.1 4470363 4471907 R pfam_scan;Pfam:PF00528; E()=9.6E-20;score=70.4;query299- 501;description=BPD_transp_1; tmhmm; query 1-515; maltose transport inner membrane protein complement(4470363..4471907) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763214 YP_005235180.1 CDS STMMW_41781 NC_016854.1 4472039 4473238 R pfam_scan;Pfam:PF01547; E()=1.6E-46;score=158.9;query 49-315;description=SBP_bac_1; tmhmm; query 1-400; periplasmic maltose-binding protein complement(4472039..4473238) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763215 YP_005235181.1 CDS STMMW_41791 NC_016854.1 4473591 4474700 D pfam_scan;Pfam:PF08402; E()=1.8E-12;score=47.0;query281-353;description=TOBE_2; pfam_scan;Pfam:PF00005; E()=2.3E-43;score=148.2;query 29-194;description=ABC_tran; maltose/maltodextrin transport ATP-binding protein 4473591..4474700 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763216 YP_005235182.1 CDS STMMW_41811 NC_016854.1 4474789 4476147 D pfam_scan;Pfam:PF02264; E()=2.2E-173;score=576.6;query 28-452;description=LamB; maltoporin 4474789..4476147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763217 YP_005235183.1 CDS STMMW_41821 NC_016854.1 4476311 4477228 D pfam_scan;Pfam:PF07148; E()=3.8E-119;score=396.8;query 11-305;description=MalM; tmhmm; query 1-306; maltose operon periplasmic protein 4476311..4477228 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763218 YP_005235184.1 CDS STMMW_41831 NC_016854.1 4477409 4477906 D pfam_scan;Pfam:PF04345; E()=1.5E-31;score=108.5;query 16-165;description=Chor_lyase; chorismate lyase 4477409..4477906 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763219 YP_005235185.1 CDS STMMW_41841 NC_016854.1 4477920 4478792 D pfam_scan;Pfam:PF01040; E()=3.2E-39;score=134.5;query 26-277;description=UbiA; tmhmm; query 1-291; 4-hydroxybenzoate octaprenyltransferase 4477920..4478792 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763220 YP_005235186.1 CDS STMMW_41851 NC_016854.1 4478891 4481311 R pfam_scan;Pfam:PF01553; E()=3.7E-28;score=97.6;query282- 424;description=Acyltransferase; glycerol-3-phosphate acyltransferase complement(4478891..4481311) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763221 YP_005235187.1 CDS STMMW_41861 NC_016854.1 4481482 4481850 D pfam_scan;Pfam:PF01219; E()=1.4E-39;score=133.6;query 16-118;description=DAGK_prokar; tmhmm; query 1-123; diacylglycerol kinase 4481482..4481850 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763222 YP_005235188.1 CDS STMMW_41871 NC_016854.1 4481959 4482567 D pfam_scan;Pfam:PF00717; E()=2.3E-18;score=65.1;query114- 180;description=Peptidase_S24; pfam_scan;Pfam:PF01726; E()=1.1E-29;score=101.5;query 1-65;description=LexA_DNA_bind; LexA repressor 4481959..4482567 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763223 YP_005235189.1 CDS STMMW_41881 NC_016854.1 4482746 4484071 D pfam_scan;Pfam:PF01554; E()=5.6E-32;score=110.5;query 16-177;description=MatE; putative DNA-damage-inducible membrane protein 4482746..4484071 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763224 YP_005235190.1 CDS STMMW_41891 NC_016854.1 4484068 4484181 D hypothetical protein 4484068..4484181 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763225 YP_005235191.1 CDS STMMW_41901 NC_016854.1 4484200 4484412 D pfam_scan;Pfam:PF05532; E()=2.3E-19;score=68.3;query5-57;description=CsbD; hypothetical protein 4484200..4484412 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763226 YP_005235192.1 CDS STMMW_41911 NC_016854.1 4484511 4485026 R pfam_scan;Pfam:PF01475; E()=2.5E-14;score=52.7;query20-138;description=FUR; zinc uptake regulation protein complement(4484511..4485026) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763227 YP_005235193.1 CDS STMMW_41921 NC_016854.1 4485273 4486583 D Signal peptide; signalp; query 1-25;cleavage_site_probability=0.991; 1.000; hypothetical protein 4485273..4486583 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763228 YP_005235194.1 CDS STMMW_41931 NC_016854.1 4486671 4487669 D pfam_scan;Pfam:PF01207; E()=3.5E-93;score=311.5;query 17-324;description=Dus; hypothetical protein 4486671..4487669 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763229 YP_005235195.1 CDS STMMW_41941 NC_016854.1 4487837 4488079 D pfam_scan;Pfam:PF09583; E()=6.6E-25;score=86.6;query1- 65;description=Phageshock_PspG; tmhmm; query 1-81; hypothetical protein 4487837..4488079 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763230 YP_005235196.1 CDS STMMW_41951 NC_016854.1 4488254 4489225 R pfam_scan;Pfam:PF08240; E()=5.1E-9;score=35.4;query 29-80;description=ADH_N; pfam_scan;Pfam:PF00107; E()=4.2E-32;score=110.8;query 138-253;description=ADH_zinc_N; quinone oxidoreductase complement(4488254..4489225) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763231 YP_005235197.1 CDS STMMW_41961 NC_016854.1 4489290 4490705 D pfam_scan;Pfam:PF00772; E()=8.5E-39;score=131.7;query 27-128;description=DnaB; pfam_scan;Pfam:PF03796; E()=4.3E-84;score=280.4;query 204-402;description=DnaB_C; replicative DNA helicase 4489290..4490705 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763232 YP_005235198.1 CDS STMMW_41971 NC_016854.1 4490737 4491816 D pfam_scan;Pfam:PF00842; E()=9.2E-41;score=138.4;query 234-358;description=Ala_racemase_C; pfam_scan;Pfam:PF01168; E()=1.7E-62;score=210.7;query 8-219;description=Ala_racemase_N; alanine racemase 4490737..4491816 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763233 YP_005235199.1 CDS STMMW_41981 NC_016854.1 4492002 4493195 D pfam_scan;Pfam:PF00155; E()=2.2E-88;score=296.3;query 27-393;description=Aminotran_1_2; aromatic-amino-acid aminotransferase 4492002..4493195 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763234 YP_005235200.1 CDS STMMW_41991 NC_016854.1 4493382 4494095 D pfam_scan;Pfam:PF03767; E()=2.6E-27;score=95.1;query13- 219;description=Acid_phosphat_B; class B acid phosphatase precursor 4493382..4494095 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763235 YP_005235201.1 CDS STMMW_42001 NC_016854.1 4494224 4494640 D pfam_scan;Pfam:PF01894; E()=9.2E-38;score=128.4;query 17-135;description=UPF0047; hypothetical protein 4494224..4494640 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763236 YP_005235202.1 CDS STMMW_42011 NC_016854.1 4494643 4494999 D pfam_scan;Pfam:PF04237; E()=1.3E-22;score=79.4;query10-102;description=DUF419; hypothetical protein 4494643..4494999 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763237 YP_005235203.1 CDS STMMW_42021 NC_016854.1 4495000 4495338 R hypothetical protein complement(4495000..4495338) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763238 YP_005235204.1 CDS STMMW_42031 NC_016854.1 4495325 4495780 R tmhmm; query 1-152; putative lipoprotein complement(4495325..4495780) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763239 YP_005235205.1 CDS STMMW_42041 NC_016854.1 4495912 4498737 R pfam_scan;Pfam:PF00005; E()=1.3E-9;score=38.0;query 468-549;description=ABC_tran; excision nuclease subunit A complement(4495912..4498737) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763240 YP_005235206.1 CDS STMMW_42051 NC_016854.1 4498702 4498818 D hypothetical protein 4498702..4498818 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763241 YP_005235207.1 CDS STMMW_42061 NC_016854.1 4498862 4499515 D pfam_scan;Pfam:PF00436; E()=1.6E-43;score=146.5;query 47-148;description=SSB; single-strand DNA-binding protein 4498862..4499515 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763242 YP_005235208.1 CDS STMMW_42062 NC_016854.1 4499663 4499788 D hypothetical protein 4499663..4499788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763243 YP_005235209.1 CDS STMMW_42081 NC_016854.1 4500556 4501188 D tmhmm; query 1-211; hypothetical protein 4500556..4501188 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763244 YP_005235210.1 CDS STMMW_42091 NC_016854.1 4501185 4502573 D tmhmm; query 1-463; putative integral membrane protein 4501185..4502573 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763245 YP_005235211.1 CDS STMMW_42101 NC_016854.1 4502563 4503882 D pfam_scan;Pfam:PF02321; E()=1.5E-21;score=76.6;query28-209;description=OEP; putative type-I secretion protein 4502563..4503882 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763246 YP_005235212.1 CDS STMMW_42111 NC_016854.1 4503879 4505156 D tmhmm; query 1-426; putative type-I secretion protein 4503879..4505156 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763247 YP_005235213.1 CDS STMMW_42121 NC_016854.1 4505173 4521852 D hypothetical protein 4505173..4521852 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763248 YP_005235214.1 CDS STMMW_42131 NC_016854.1 4521892 4523958 D pfam_scan;Pfam:PF00005; E()=2.3E-32;score=112.3;query 493-660;description=ABC_tran; tmhmm; query 1-689; putative type-1 secretion protein 4521892..4523958 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763249 YP_005235215.1 CDS STMMW_42141 NC_016854.1 4524236 4524517 R tmhmm; query 1-94; hypothetical protein complement(4524236..4524517) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763250 YP_005235216.1 CDS STMMW_42151 NC_016854.1 4525080 4526681 D pfam_scan;Pfam:PF00563; E()=1.2E-65;score=220.9;query 273-506;description=EAL; tmhmm; query 1-534; hypothetical protein 4525080..4526681 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763251 YP_005235217.1 CDS STMMW_42161 NC_016854.1 4526669 4526992 R pfam_scan;Pfam:PF00165; E()=9.3E-13;score=47.4;query66-105;description=HTH_AraC; regulatory protein SoxS complement(4526669..4526992) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763252 YP_005235218.1 CDS STMMW_42171 NC_016854.1 4527079 4527537 D pfam_scan;Pfam:PF09278; E()=9.0E-14;score=50.9;query55-119;description=MerR-DNA- bind; pfam_scan;Pfam:PF00376; E()=9.0E-13;score=47.1;query13-49;description=MerR; SoxR protein 4527079..4527537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763253 YP_005235219.1 CDS STMMW_42181 NC_016854.1 4527830 4528498 D pfam_scan;Pfam:PF00043; E()=1.1E-7;score=31.2;query 134-205;description=GST_C; pfam_scan;Pfam:PF02798; E()=1.1E-13;score=50.4;query9-73;description=GST_N; putative glutathione-S-transferase 4527830..4528498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763254 YP_005235220.1 CDS STMMW_42191 NC_016854.1 4528845 4530194 D pfam_scan;Pfam:PF00860; E()=3.2E-77;score=259.7;query 26-409;description=Xan_ur_permease; tmhmm; query 1-450; putative xanthine/uracil permeases family protein 4528845..4530194 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763255 YP_005235221.1 CDS STMMW_42201 NC_016854.1 4530344 4531990 D pfam_scan;Pfam:PF00999; E()=2.4E-60;score=204.3;query 9-415;description=Na_H_Exchanger; tmhmm; query 1-549; putative sodium/hydrogen exchanger family protein 4530344..4531990 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763256 YP_005235222.1 CDS STMMW_42211 NC_016854.1 4532085 4532972 R pfam_scan;Pfam:PF00126; E()=2.7E-21;score=74.7;query3-62;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.8E-43;score=147.7;query 89-287;description=LysR_substrate; LysR family regulatory protein complement(4532085..4532972) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763257 YP_005235223.1 CDS STMMW_42221 NC_016854.1 4533076 4533486 D pfam_scan;Pfam:PF03788; E()=7.6E-28;score=96.0;query30-123;description=LrgA; tmhmm; query 1-137; hypothetical protein 4533076..4533486 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763258 YP_005235224.1 CDS STMMW_42231 NC_016854.1 4533479 4534168 D pfam_scan;Pfam:PF04172; E()=4.9E-74;score=247.9;query 14-227;description=LrgB; tmhmm; query 1-230; hypothetical protein 4533479..4534168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763259 YP_005235225.1 CDS STMMW_42241 NC_016854.1 4534207 4535856 R pfam_scan;Pfam:PF00474; E()=3.4E-140;score=466.9;query 63-468;description=SSF; tmhmm; query 1-550; sodium:solute symporter family protein complement(4534207..4535856) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763260 YP_005235226.1 CDS STMMW_42251 NC_016854.1 4535853 4536167 R pfam_scan;Pfam:PF04341; E()=1.1E-34;score=117.7;query 9-100;description=DUF485; tmhmm; query 1-105; hypothetical protein complement(4535853..4536167) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763261 YP_005235227.1 CDS STMMW_42261 NC_016854.1 4536413 4538371 R pfam_scan;Pfam:PF00501; E()=5.8E-118;score=393.6;query 109-547;description=AMP-binding; acetyl-coenzyme A synthetase complement(4536413..4538371) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763262 YP_005235228.1 CDS STMMW_42271 NC_016854.1 4538558 4538704 D hypothetical protein 4538558..4538704 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763263 YP_005235229.1 CDS STMMW_42281 NC_016854.1 4538803 4540239 D pfam_scan;Pfam:PF02335; E()=8.1E-186;score=617.4;query 43-472;description=Cytochrom_C552; cytochrome C552 4538803..4540239 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763264 YP_005235230.1 CDS STMMW_42291 NC_016854.1 4540264 4540917 D pfam_scan;Pfam:PF09699; E()=1.4E-4;score=20.7;query 162-200;description=Paired_CXXCH_1; cytochrome c-type protein NrfB precursor 4540264..4540917 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763265 YP_005235231.1 CDS STMMW_42301 NC_016854.1 4540914 4541585 D pfam_scan;Pfam:PF00037; E()=9.8E-5;score=21.2;query 40-56;description=Fer4; cytochrome C-type biogenesis protein 4540914..4541585 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763266 YP_005235232.1 CDS STMMW_42311 NC_016854.1 4541582 4542538 D pfam_scan;Pfam:PF03916; E()=1.5E-112;score=375.5;query 5-318;description=NrfD; tmhmm; query 1-319; cytochrome C-type biogenesis protein 4541582..4542538 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763267 YP_005235233.1 CDS STMMW_42321 NC_016854.1 4542531 4544753 D pfam_scan;Pfam:PF03918; E()=1.1E-45;score=154.3;query 610-735;description=CcmH; pfam_scan;Pfam:PF01578; E()=3.3E-45;score=153.7;query 95-301;description=Cytochrom_C_asm; tmhmm; query 1-741; cytochrome C-type biogenesis protein 4542531..4544753 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763268 YP_005235234.1 CDS STMMW_42331 NC_016854.1 4544750 4545370 D tmhmm; query 1-207; NrfG protein 4544750..4545370 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763269 YP_005235235.1 CDS STMMW_42341 NC_016854.1 4545715 4547025 D pfam_scan;Pfam:PF00375; E()=5.1E-128;score=426.8;query 8-411;description=SDF; tmhmm; query 1-437; proton glutamate symport protein 4545715..4547025 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763270 YP_005235236.1 CDS STMMW_42351 NC_016854.1 4547183 4547794 R pfam_scan;Pfam:PF08238; E()=2.2E-6;score=27.1;query 117-147;description=Sel1; hypothetical protein complement(4547183..4547794) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763271 YP_005235237.1 CDS STMMW_42361 NC_016854.1 4548049 4550196 R selenocysteine; pfam_scan;Pfam:PF00384; E()=1.7E-94;score=316.4;query 61-486;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=4.5E-16;score=57.9;query1- 53;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=6.5E-28;score=96.1;query575- 681;description=Molydop_binding; formate dehydrogenase H complement(join(4548049..4549776,4549780..4550196)) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763272 YP_005235238.1 CDS STMMW_42381 NC_016854.1 4551717 4552181 R pfam_scan;Pfam:PF00583; E()=2.4E-16;score=59.1;query64- 144;description=Acetyltransf_1; putative acetyltransferase complement(4551717..4552181) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763274 YP_005235239.1 CDS STMMW_42391 NC_016854.1 4552303 4552746 R pfam_scan;Pfam:PF00903; E()=1.1E-7;score=31.7;query 8-138;description=Glyoxalase; hypothetical protein complement(4552303..4552746) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763275 YP_005235240.1 CDS STMMW_42401 NC_016854.1 4552866 4553201 R pfam_scan;Pfam:PF03831; E()=2.3E-27;score=93.9;query43-97;description=PhnA; pfam_scan;Pfam:PF08274; E()=6.9E-17;score=59.5;query2- 31;description=PhnA_Zn_Ribbon; hypothetical protein complement(4552866..4553201) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763276 YP_005235241.1 CDS STMMW_42411 NC_016854.1 4553669 4555171 D pfam_scan;Pfam:PF00083; E()=4.7E-66;score=222.8;query 27-448;description=Sugar_tr; pfam_scan;Pfam:PF08946; E()=6.0E-23;score=79.8;query454-499;description=Osmo_CC; tmhmm; query 1-501; putative proline/betaine transporter; ProP 4553669..4555171 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763277 YP_005235242.1 CDS STMMW_42421 NC_016854.1 4555338 4556408 R pfam_scan;Pfam:PF02518; E()=1.3E-22;score=79.2;query249-354;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=9.3E-11;score=41.1;query144-200;description=HisKA; tmhmm; query 1-357; two-component sensor kinase complement(4555338..4556408) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763278 YP_005235243.1 CDS STMMW_42431 NC_016854.1 4556418 4557086 R pfam_scan;Pfam:PF00486; E()=3.6E-21;score=74.0;query145- 216;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=9.2E-30;score=102.6;query 3-113;description=Response_reg; two-component response regulator complement(4556418..4557086) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763279 YP_005235244.1 CDS STMMW_42441 NC_016854.1 4557083 4558726 R pfam_scan;Pfam:PF00884; E()=1.9E-75;score=253.2;query 238-531;description=Sulfatase; pfam_scan;Pfam:PF08019; E()=9.8E-42;score=141.8;query 58-211;description=DUF1705; tmhmm; query 1-548; hypothetical protein complement(4557083..4558726) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763280 YP_005235245.1 CDS STMMW_42451 NC_016854.1 4558860 4560197 R pfam_scan;Pfam:PF00324; E()=1.0E-35;score=122.6;query 15-384;description=AA_permease; tmhmm; query 1-446; putative amino acid permease complement(4558860..4560197) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763281 YP_005235246.1 CDS STMMW_42461 NC_016854.1 4560337 4561098 R pfam_scan;Pfam:PF00165; E()=3.1E-6;score=26.7;query 155-195;description=HTH_AraC; putative AraC family regulatory protein complement(4560337..4561098) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763282 YP_005235247.1 CDS STMMW_42471 NC_016854.1 4561396 4563666 R pfam_scan;Pfam:PF03711; E()=3.2E-41;score=139.9;query 616-744;description=OKR_DC_1_C; pfam_scan;Pfam:PF01276; E()=8.0E-182;score=604.5;query 141-590;description=OKR_DC_1; pfam_scan;Pfam:PF03709; E()=2.0E-25;score=88.5;query19-135;description=OKR_DC_1_N; arginine decarboxylase complement(4561396..4563666) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763283 YP_005235248.1 CDS STMMW_42481 NC_016854.1 4563896 4564828 R pfam_scan;Pfam:PF00165; E()=1.9E-6;score=27.4;query 208-249;description=HTH_AraC; melibiose operon regulatory protein complement(4563896..4564828) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763284 YP_005235249.1 CDS STMMW_42491 NC_016854.1 4565097 4566452 D pfam_scan;Pfam:PF02056; E()=4.9E-79;score=263.4;query 6-188;description=Glyco_hydro_4; alpha-galactosidase 4565097..4566452 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763285 YP_005235250.1 CDS STMMW_42501 NC_016854.1 4566536 4567966 D tmhmm; query 1-477; melibiose carrier protein 4566536..4567966 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763286 YP_005235251.1 CDS STMMW_42511 NC_016854.1 4568064 4569710 R pfam_scan;Pfam:PF05683; E()=4.0E-76;score=254.1;query 332-539;description=Fumerase_C; pfam_scan;Pfam:PF05681; E()=7.0E-84;score=280.7;query 48-328;description=Fumerase; fumarate hydratase class I complement(4568064..4569710) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763287 YP_005235252.1 CDS STMMW_42521 NC_016854.1 4569806 4571146 R pfam_scan;Pfam:PF03605; E()=6.9E-160;score=531.7;query 6-376;description=DcuA_DcuB; tmhmm; query 1-447; anaerobic C4-dicarboxylate transporter complement(4569806..4571146) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763288 YP_005235253.1 CDS STMMW_42531 NC_016854.1 4571293 4571559 R hypothetical protein complement(4571293..4571559) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763289 YP_005235254.1 CDS STMMW_42541 NC_016854.1 4571876 4572595 R pfam_scan;Pfam:PF00072; E()=1.4E-19;score=69.8;query4- 117;description=Response_reg; two-component response regulator complement(4571876..4572595) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763290 YP_005235255.1 CDS STMMW_42551 NC_016854.1 4572592 4574223 R pfam_scan;Pfam:PF00989; E()=1.0E-12;score=47.8;query222-323;description=PAS; pfam_scan;Pfam:PF02518; E()=1.1E-24;score=85.9;query435-535;description=HATPase_c; tmhmm; query 1-544; two-component sensor kinase complement(4572592..4574223) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763291 YP_005235256.1 CDS STMMW_42561 NC_016854.1 4574579 4577008 D pfam_scan;Pfam:PF00384; E()=2.6E-59;score=200.7;query 118-567;description=Molybdopterin; pfam_scan;Pfam:PF04879; E()=1.1E-6;score=28.0;query 56-115;description=Molybdop_Fe4S4; pfam_scan;Pfam:PF01568; E()=1.7E-25;score=88.3;query690- 801;description=Molydop_binding; anaerobic dimethyl sulfoxide reductase chain 4574579..4577008 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763292 YP_005235257.1 CDS STMMW_42571 NC_016854.1 4577022 4577648 D pfam_scan;Pfam:PF00037; E()=3.2E-6;score=25.9;query 92-114;description=Fer4; anaerobic dimethyl sulfoxide reductase chain A 4577022..4577648 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763293 YP_005235258.1 CDS STMMW_42581 NC_016854.1 4577641 4578414 D pfam_scan;Pfam:PF04976; E()=4.5E-35;score=120.7;query 1-251;description=DmsC; tmhmm; query 1-258; putative dimethyl sulfoxide reductase subunit C 4577641..4578414 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763294 YP_005235259.1 CDS STMMW_42591 NC_016854.1 4578430 4579083 D pfam_scan;Pfam:PF02613; E()=1.5E-26;score=92.4;query57- 178;description=Nitrate_red_del; hypothetical protein 4578430..4579083 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763295 YP_005235260.1 CDS STMMW_42601 NC_016854.1 4579167 4580567 R pfam_scan;Pfam:PF09362; E()=4.0E-45;score=153.4;query 40-265;description=DUF1996; hypothetical protein complement(4579167..4580567) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763296 YP_005235261.1 CDS STMMW_42611 NC_016854.1 4580871 4581776 D pfam_scan;Pfam:PF06977; E()=8.8E-27;score=92.9;query160-252;description=SdiA- regulated; tmhmm; query 1-302; hypothetical protein 4580871..4581776 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763297 YP_005235262.1 CDS STMMW_42621 NC_016854.1 4582070 4582339 R hypothetical protein complement(4582070..4582339) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763298 YP_005235263.1 CDS STMMW_42631 NC_016854.1 4582347 4582562 R hypothetical protein complement(4582347..4582562) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763299 YP_005235264.1 CDS STMMW_42641 NC_016854.1 4582585 4582872 R pfam_scan;Pfam:PF00196; E()=7.4E-10;score=37.9;query30-84;description=GerE; putative GerE family regulatory protein complement(4582585..4582872) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763300 YP_005235265.1 CDS STMMW_42651 NC_016854.1 4582869 4583744 R pfam_scan;Pfam:PF00165; E()=2.7E-4;score=20.5;query 190-221;description=HTH_AraC; AraC family regulatory protein complement(4582869..4583744) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763301 YP_005235266.1 CDS STMMW_42661 NC_016854.1 4584009 4584230 R hypothetical protein complement(4584009..4584230) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763302 YP_005235267.1 CDS STMMW_42671 NC_016854.1 4584547 4584840 D pfam_scan;Pfam:PF08681; E()=3.7E-22;score=77.9;query14-88;description=DUF1778; hypothetical protein 4584547..4584840 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763303 YP_005235268.1 CDS STMMW_42681 NC_016854.1 4584837 4585328 D pfam_scan;Pfam:PF00583; E()=2.8E-6;score=27.0;query 82-142;description=Acetyltransf_1; putative acetyltransferase 4584837..4585328 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763304 YP_005235269.1 CDS STMMW_42691 NC_016854.1 4585576 4586328 R pfam_scan;Pfam:PF01569; E()=8.9E-15;score=54.2;query112-213;description=PAP2; nonspecific acid phosphatase complement(4585576..4586328) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763305 YP_005235270.1 CDS STMMW_42701 NC_016854.1 4587987 4588319 D pfam_scan;Pfam:PF09278; E()=9.2E-8;score=31.7;query 46-106;description=MerR-DNA-bind; pfam_scan;Pfam:PF00376; E()=3.5E-15;score=54.8;query3-38;description=MerR; putative regulatory protein 4587987..4588319 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763306 YP_005235271.1 CDS STMMW_42711 NC_016854.1 4588758 4589333 R pfam_scan;Pfam:PF00440; E()=5.2E-6;score=25.7;query 6-49;description=TetR_N; putative transcriptional regulator complement(4588758..4589333) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763307 YP_005235272.1 CDS STMMW_42721 NC_016854.1 4589370 4591073 R pfam_scan;Pfam:PF11412; E()=1.2E-40;score=137.8;query 26-139;description=DsbC; pfam_scan;Pfam:PF02683; E()=3.2E-20;score=72.3;query174-375;description=DsbD; pfam_scan;Pfam:PF00085; E()=3.1E-9;score=36.1;query 457-560;description=Thioredoxin; tmhmm; query 1-568; thiol:disulfide interchange protein DsbD complement(4589370..4591073) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763308 YP_005235273.1 CDS STMMW_42731 NC_016854.1 4591049 4591396 R pfam_scan;Pfam:PF03091; E()=3.0E-37;score=126.0;query 15-114;description=CutA1; periplasmic divalent cation tolerance protein CutA complement(4591049..4591396) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763309 YP_005235274.1 CDS STMMW_42741 NC_016854.1 4591517 4592701 R pfam_scan;Pfam:PF03605; E()=3.2E-138;score=460.4;query 1-326;description=DcuA_DcuB; tmhmm; query 1-395; anaerobic C4-dicarboxylate transporter complement(4591517..4592701) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763310 YP_005235275.1 CDS STMMW_42751 NC_016854.1 4592933 4594369 R pfam_scan;Pfam:PF10415; E()=1.9E-16;score=59.4;query411- 465;description=FumaraseC_C; pfam_scan;Pfam:PF00206; E()=1.1E-114;score=382.4;query 13-345;description=Lyase_1; aspartate ammonia-lyase complement(4592933..4594369) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763311 YP_005235276.1 CDS STMMW_42761 NC_016854.1 4594671 4595186 D pfam_scan;Pfam:PF04186; E()=1.5E-36;score=124.6;query 19-130;description=FxsA; tmhmm; query 1-172; FxsA protein 4594671..4595186 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763312 YP_005235277.1 CDS STMMW_42771 NC_016854.1 4595245 4596486 R pfam_scan;Pfam:PF00324; E()=6.1E-12;score=44.2;query21- 407;description=AA_permease; tmhmm; query 1-414; putative permease complement(4595245..4596486) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763313 YP_005235278.1 CDS STMMW_42781 NC_016854.1 4596762 4597055 D pfam_scan;Pfam:PF00166; E()=3.7E-30;score=103.6;query 3-95;description=Cpn10; GroES protein 4596762..4597055 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763314 YP_005235279.1 CDS STMMW_42791 NC_016854.1 4597099 4598745 D pfam_scan;Pfam:PF00118; E()=1.6E-127;score=425.8;query 23-523;description=Cpn60_TCP1; GroEL protein 4597099..4598745 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763315 YP_005235280.1 CDS STMMW_42801 NC_016854.1 4598971 4599342 D Signal peptide; signalp; query 1-29;cleavage_site_probability=0.593; 0.996; hypothetical protein 4598971..4599342 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763317 YP_005235281.1 CDS STMMW_42811 NC_016854.1 4599390 4600247 R hypothetical protein complement(4599390..4600247) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763318 YP_005235282.1 CDS STMMW_42821 NC_016854.1 4600529 4601557 R pfam_scan;Pfam:PF04055; E()=2.4E-10;score=40.2;query117- 263;description=Radical_SAM; hypothetical protein complement(4600529..4601557) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763319 YP_005235283.1 CDS STMMW_42831 NC_016854.1 4601598 4602164 D pfam_scan;Pfam:PF01132; E()=1.7E-22;score=78.1;query71-123;description=EFP; pfam_scan;Pfam:PF09285; E()=2.3E-25;score=87.4;query131-186;description=Elong- fact-P_C; pfam_scan;Pfam:PF08207; E()=1.6E-23;score=81.9;query7-61;description=EFP_N; elongation factor P 4601598..4602164 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763320 YP_005235284.1 CDS STMMW_42841 NC_016854.1 4602467 4602613 D pfam_scan;Pfam:PF08085; E()=4.5E-16;score=57.6;query3-43;description=Entericidin; tmhmm; query 1-49; entericidin B 4602467..4602613 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763321 YP_005235285.1 CDS STMMW_42851 NC_016854.1 4602644 4603231 R pfam_scan;Pfam:PF00196; E()=1.7E-14;score=52.6;query136-184;description=GerE; transcriptional regulator complement(4602644..4603231) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763322 YP_005235286.1 CDS STMMW_42861 NC_016854.1 4603488 4603805 D pfam_scan;Pfam:PF00893; E()=2.0E-32;score=110.9;query 1-93;description=Multi_Drug_Res; tmhmm; query 1-106; SugE protein 4603488..4603805 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763323 YP_005235287.1 CDS STMMW_42871 NC_016854.1 4603822 4604355 R pfam_scan;Pfam:PF08212; E()=3.3E-54;score=182.3;query 34-174;description=Lipocalin_2; putative lipoprotein complement(4603822..4604355) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763324 YP_005235288.1 CDS STMMW_42881 NC_016854.1 4604467 4604826 R pfam_scan;Pfam:PF02313; E()=2.7E-52;score=175.3;query 3-117;description=Fumarate_red_D; tmhmm; query 1-120; membrane anchor polypeptide; fumarate reductase complex subunit D complement(4604467..4604826) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763325 YP_005235289.1 CDS STMMW_42891 NC_016854.1 4604837 4605232 R pfam_scan;Pfam:PF02300; E()=2.0E-59;score=198.5;query 2-129;description=Fumarate_red_C; tmhmm; query 1-132; membrane anchor polypeptide; fumarate reductase complex subunit C complement(4604837..4605232) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763326 YP_005235290.1 CDS STMMW_42901 NC_016854.1 4605243 4605977 R fumarate reductase, iron-sulfur protein complement(4605243..4605977) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763327 YP_005235291.1 CDS STMMW_42911 NC_016854.1 4605970 4607760 R pfam_scan;Pfam:PF02910; E()=8.2E-41;score=138.6;query 453-581;description=Succ_DH_flav_C; pfam_scan;Pfam:PF00890; E()=1.5E-122;score=408.9;query 7-397;description=FAD_binding_2; fumarate reductase flavoprotein subunit complement(4605970..4607760) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763328 YP_005235292.1 CDS STMMW_42921 NC_016854.1 4608083 4609060 D pfam_scan;Pfam:PF00152; E()=3.6E-65;score=220.0;query 15-323;description=tRNA-synt_2; lysyl-tRNA synthetase 4608083..4609060 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763329 YP_005235293.1 CDS STMMW_42931 NC_016854.1 4609286 4610788 D pfam_scan;Pfam:PF00324; E()=6.1E-13;score=47.5;query24- 475;description=AA_permease; tmhmm; query 1-501; putative amino acid permease 4609286..4610788 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763330 YP_005235294.1 CDS STMMW_42941 NC_016854.1 4610840 4611154 D pfam_scan;Pfam:PF10840; E()=2.8E-46;score=155.5;query 1-103;description=DUF2645; tmhmm; query 1-105; hypothetical protein 4610840..4611154 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763331 YP_005235295.1 CDS STMMW_42951 NC_016854.1 4611221 4614547 R pfam_scan;Pfam:PF00924; E()=3.3E-60;score=202.5;query 875-1075;description=MS_channel; tmhmm; query 1-1109; hypothetical protein complement(4611221..4614547) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763332 YP_005235296.1 CDS STMMW_42961 NC_016854.1 4614566 4615534 R pfam_scan;Pfam:PF02666; E()=1.7E-66;score=223.0;query 63-266;description=PS_Dcarbxylase; phosphatidylserine decarboxylase proenzyme complement(4614566..4615534) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763333 YP_005235297.1 CDS STMMW_42971 NC_016854.1 4615626 4616702 R pfam_scan;Pfam:PF03193; E()=1.7E-94;score=315.8;query 49-342;description=DUF258; hypothetical protein complement(4615626..4616702) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763334 YP_005235298.1 CDS STMMW_42981 NC_016854.1 4616785 4617330 D pfam_scan;Pfam:PF00929; E()=6.8E-31;score=107.0;query 8-170;description=Exonuc_X-T; oligoribonuclease 4616785..4617330 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763335 YP_005235299.1 CDS STMMW_43001 NC_016854.1 4619217 4620371 R pfam_scan;Pfam:PF08331; E()=1.8E-27;score=94.2;query67-145;description=DUF1730; putative 4Fe-4S binding protein complement(4619217..4620371) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763337 YP_005235300.1 CDS STMMW_43011 NC_016854.1 4620355 4621902 D pfam_scan;Pfam:PF01256; E()=1.9E-82;score=275.6;query 258-495;description=Carb_kinase; pfam_scan;Pfam:PF03853; E()=3.6E-48;score=163.0;query 35-199;description=YjeF_N; hypothetical protein 4620355..4621902 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763338 YP_005235301.1 CDS STMMW_43021 NC_016854.1 4621877 4622335 D pfam_scan;Pfam:PF02367; E()=4.9E-45;score=151.4;query 13-133;description=UPF0079; hypothetical protein 4621877..4622335 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763339 YP_005235302.1 CDS STMMW_43031 NC_016854.1 4622352 4623671 D pfam_scan;Pfam:PF01520; E()=4.8E-49;score=166.5;query 188-407;description=Amidase_3; N-acetylmuramoyl-L-alanine amidase 4622352..4623671 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763340 YP_005235303.1 CDS STMMW_43041 NC_016854.1 4623681 4625537 D pfam_scan;Pfam:PF01119; E()=4.8E-39;score=132.1;query 213-330;description=DNA_mis_repair; pfam_scan;Pfam:PF02518; E()=7.6E-8;score=31.7;query 22-79;description=HATPase_c; pfam_scan;Pfam:PF08676; E()=8.7E-22;score=77.1;query438-566;description=MutL_C; DNA mismatch repair protein 4623681..4625537 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763341 YP_005235304.1 CDS STMMW_43051 NC_016854.1 4625530 4626480 D pfam_scan;Pfam:PF01715; E()=3.3E-105;score=350.2;query 45-297;description=IPPT; tRNA delta-2-isopentenylpyrophosphate (IPP) transferase 4625530..4626480 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763342 YP_005235305.1 CDS STMMW_43061 NC_016854.1 4626563 4626871 D pfam_scan;Pfam:PF01423; E()=5.2E-6;score=26.2;query 18-56;description=LSM; host factor-I protein(HF-I) 4626563..4626871 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763343 YP_005235306.1 CDS STMMW_43071 NC_016854.1 4626943 4628223 D pfam_scan;Pfam:PF01926; E()=3.1E-26;score=91.5;query199-320;description=MMR_HSR1; pfam_scan;Pfam:PF02421; E()=4.1E-8;score=32.7;query 199-368;description=FeoB_N; HflX protein, putative GTP-binding protein 4626943..4628223 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763344 YP_005235307.1 CDS STMMW_43081 NC_016854.1 4628438 4629697 D pfam_scan;Pfam:PF01145; E()=1.4E-35;score=122.4;query 98-271;description=Band_7; tmhmm; query 1-420; HflK protein 4628438..4629697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763345 YP_005235308.1 CDS STMMW_43091 NC_016854.1 4629700 4630704 D pfam_scan;Pfam:PF01145; E()=2.1E-39;score=134.9;query 21-243;description=Band_7; tmhmm; query 1-335; HflC protein 4629700..4630704 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763349 YP_005235309.1 CDS STMMW_43101 NC_016854.1 4631083 4632381 D pfam_scan;Pfam:PF00709; E()=1.3E-186;score=619.7;query 4-424;description=Adenylsucc_synt; adenylosuccinate synthetase 4631083..4632381 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763350 YP_005235310.1 CDS STMMW_43111 NC_016854.1 4632588 4633013 D pfam_scan;Pfam:PF02082; E()=9.4E-32;score=109.1;query 2-119;description=Rrf2; hypothetical protein 4632588..4633013 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763351 YP_005235311.1 CDS STMMW_43121 NC_016854.1 4633051 4635489 D pfam_scan;Pfam:PF00773; E()=1.4E-119;score=398.8;query 260-587;description=RNB; pfam_scan;Pfam:PF00575; E()=6.4E-16;score=57.8;query641-724;description=S1; pfam_scan;Pfam:PF08206; E()=7.8E-21;score=72.9;query87-144;description=OB_RNB; pfam_scan;Pfam:PF08461; E()=1.9E-12;score=46.8;query23-84;description=HTH_12; ribonuclease R (RNase R) 4633051..4635489 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763352 YP_005235312.1 CDS STMMW_43131 NC_016854.1 4635580 4636311 D pfam_scan;Pfam:PF08032; E()=2.0E-18;score=65.9;query4- 77;description=SpoU_sub_bind; pfam_scan;Pfam:PF00588; E()=3.9E-46;score=156.0;query 96-236;description=SpoU_methylase; tRNA/rRNA methyltransferase 4635580..4636311 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763353 YP_005235313.1 CDS STMMW_43141 NC_016854.1 4636443 4636847 D pfam_scan;Pfam:PF09938; E()=3.3E-44;score=149.5;query 2-132;description=DUF2170; hypothetical protein 4636443..4636847 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763354 YP_005235314.1 CDS STMMW_43151 NC_016854.1 4636862 4637560 D pfam_scan;Pfam:PF04012; E()=4.2E-48;score=163.2;query 2-232;description=PspA_IM30; hypothetical protein 4636862..4637560 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763355 YP_005235315.1 CDS STMMW_43161 NC_016854.1 4637560 4638630 D pfam_scan;Pfam:PF07885; E()=3.4E-10;score=39.1;query39- 101;description=Ion_trans_2; tmhmm; query 1-357; putative inner-membrane protein 4637560..4638630 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763356 YP_005235316.1 CDS STMMW_43171 NC_016854.1 4638603 4639286 D pfam_scan;Pfam:PF10679; E()=3.2E-62;score=209.3;query 10-225;description=DUF2491; hypothetical protein 4638603..4639286 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763357 YP_005235317.1 CDS STMMW_43181 NC_016854.1 4639304 4639702 D pfam_scan;Pfam:PF03994; E()=1.6E-17;score=62.9;query13-65;description=DUF350; tmhmm; query 1-133; hypothetical protein 4639304..4639702 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763358 YP_005235318.1 CDS STMMW_43191 NC_016854.1 4639712 4640350 D pfam_scan;Pfam:PF06693; E()=2.7E-40;score=137.6;query 63-212;description=DUF1190; hypothetical protein 4639712..4640350 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763359 YP_005235319.1 CDS STMMW_43201 NC_016854.1 4640353 4641516 D pfam_scan;Pfam:PF03738; E()=2.3E-160;score=532.6;query 10-385;description=GSP_synth; hypothetical protein 4640353..4641516 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763360 YP_005235320.1 CDS STMMW_43211 NC_016854.1 4641601 4643223 D pfam_scan;Pfam:PF00441; E()=4.8E-32;score=110.8;query 285-438;description=Acyl-CoA_dh_1; pfam_scan;Pfam:PF02770; E()=2.2E-11;score=42.9;query181-231;description=Acyl- CoA_dh_M; acyl Co-A dehydrogenase 4641601..4643223 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763361 YP_005235321.1 CDS STMMW_43221 NC_016854.1 4643268 4643588 R pfam_scan;Pfam:PF07338; E()=1.9E-18;score=66.2;query43-105;description=DUF1471; hypothetical protein complement(4643268..4643588) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763362 YP_005235322.1 CDS STMMW_43231 NC_016854.1 4643674 4644003 R pfam_scan;Pfam:PF07338; E()=8.9E-17;score=60.9;query43-108;description=DUF1471; tmhmm; query 1-110; hypothetical protein complement(4643674..4644003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763363 YP_005235323.1 CDS STMMW_43241 NC_016854.1 4644187 4644936 D pfam_scan;Pfam:PF00326; E()=4.2E-12;score=45.2;query50- 242;description=Peptidase_S9; hypothetical protein 4644187..4644936 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763364 YP_005235324.1 CDS STMMW_43251 NC_016854.1 4644933 4645688 R pfam_scan;Pfam:PF00455; E()=1.9E-44;score=150.7;query 78-230;description=DeoR; pfam_scan;Pfam:PF08220; E()=6.9E-19;score=66.5;query6-62;description=HTH_DeoR; transcriptional regulator complement(4644933..4645688) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763365 YP_005235325.1 CDS STMMW_43261 NC_016854.1 4645793 4646857 R hypothetical protein complement(4645793..4646857) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763366 YP_005235326.1 CDS STMMW_43271 NC_016854.1 4647187 4648617 D pfam_scan;Pfam:PF03611; E()=4.3E-127;score=423.9;query 23-424;description=EIIC-GAT; tmhmm; query 1-477; putative transport protein SgaT 4647187..4648617 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763367 YP_005235327.1 CDS STMMW_43281 NC_016854.1 4648633 4648938 D pfam_scan;Pfam:PF02302; E()=3.9E-13;score=49.6;query4-79;description=PTS_IIB; putative PTS system IIB protein 4648633..4648938 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763368 YP_005235328.1 CDS STMMW_43291 NC_016854.1 4648948 4649412 D pfam_scan;Pfam:PF00359; E()=3.0E-34;score=117.4;query 8-149;description=PTS_EIIA_2; sugar phosphotransferase 4648948..4649412 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763369 YP_005235329.1 CDS STMMW_43301 NC_016854.1 4649426 4650076 D pfam_scan;Pfam:PF00215; E()=6.5E-45;score=152.8;query 4-207;description=OMPdecase; putative hexulose-6-phosphate synthase 4649426..4650076 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763370 YP_005235330.1 CDS STMMW_43311 NC_016854.1 4650086 4650940 D pfam_scan;Pfam:PF01261; E()=2.7E-36;score=124.4;query 25-230;description=AP_endonuc_2; hypothetical protein 4650086..4650940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763371 YP_005235331.1 CDS STMMW_43321 NC_016854.1 4650940 4651626 D pfam_scan;Pfam:PF00596; E()=5.8E-54;score=182.0;query 6-194;description=Aldolase_II; class II aldolase 4650940..4651626 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763372 YP_005235332.1 CDS STMMW_43331 NC_016854.1 4651755 4652030 R pfam_scan;Pfam:PF07338; E()=5.1E-16;score=58.5;query23-91;description=DUF1471; hypothetical protein complement(4651755..4652030) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763373 YP_005235333.1 CDS STMMW_43341 NC_016854.1 4652224 4652430 D Signal peptide; signalp; query 1-19;cleavage_site_probability=0.511; 0.583; hypothetical protein 4652224..4652430 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763374 YP_005235334.1 CDS STMMW_43351 NC_016854.1 4652501 4652896 D pfam_scan;Pfam:PF01250; E()=3.6E-33;score=113.1;query 2-91;description=Ribosomal_S6; 30S ribosomal protein S6 4652501..4652896 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763375 YP_005235335.1 CDS STMMW_43361 NC_016854.1 4652903 4653217 D pfam_scan;Pfam:PF00436; E()=5.2E-11;score=42.0;query3-93;description=SSB; primosomal replication protein n 4652903..4653217 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763376 YP_005235336.1 CDS STMMW_43371 NC_016854.1 4653222 4653449 D pfam_scan;Pfam:PF01084; E()=4.9E-25;score=86.2;query16- 68;description=Ribosomal_S18; 30s ribosomal subunit protein S18 4653222..4653449 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763377 YP_005235337.1 CDS STMMW_43381 NC_016854.1 4653491 4653940 D pfam_scan;Pfam:PF03948; E()=1.5E-25;score=88.6;query63- 149;description=Ribosomal_L9_C; pfam_scan;Pfam:PF01281; E()=1.0E-21;score=75.6;query1- 48;description=Ribosomal_L9_N; 50s ribosomal subunit protein L9 4653491..4653940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763378 YP_005235338.1 CDS STMMW_43391 NC_016854.1 4654088 4655014 D pfam_scan;Pfam:PF00892; E()=7.4E-14;score=51.5;query50-158;description=DUF6; tmhmm; query 1-309; hypothetical protein 4654088..4655014 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763379 YP_005235339.1 CDS STMMW_43401 NC_016854.1 4655064 4655699 R pfam_scan;Pfam:PF08525; E()=2.9E-8;score=32.8;query 22-51;description=OapA_N; pfam_scan;Pfam:PF04225; E()=1.7E-34;score=117.0;query 126-210;description=OapA; hypothetical protein complement(4655064..4655699) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763380 YP_005235340.1 CDS STMMW_43411 NC_016854.1 4655877 4656539 D pfam_scan;Pfam:PF01346; E()=2.2E-23;score=82.2;query14-122;description=FKBP_N; pfam_scan;Pfam:PF00254; E()=9.7E-32;score=108.7;query 127-217;description=FKBP_C; FkbP-type peptidyl-prolyl cis-trans isomerase 4655877..4656539 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763381 YP_005235341.1 CDS STMMW_43421 NC_016854.1 4656835 4658244 D pfam_scan;Pfam:PF00324; E()=1.3E-134;score=448.7;query 27-464;description=AA_permease; tmhmm; query 1-470; D-serine/D-alanine/glycine transporter 4656835..4658244 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763382 YP_005235342.1 CDS STMMW_43431 NC_016854.1 4658356 4659018 R pfam_scan;Pfam:PF04405; E()=3.5E-18;score=64.2;query5-58;description=ScdA_N; pfam_scan;Pfam:PF01814; E()=4.1E-8;score=32.6;query 78-140;description=Hemerythrin; hypothetical protein complement(4658356..4659018) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763383 YP_005235343.1 CDS STMMW_43441 NC_016854.1 4659121 4660086 R pfam_scan;Pfam:PF00892; E()=3.9E-10;score=39.5;query14-122;description=DUF6; tmhmm; query 1-322; hypothetical protein complement(4659121..4660086) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763384 YP_005235344.1 CDS STMMW_43451 NC_016854.1 4660167 4661015 R pfam_scan;Pfam:PF05368; E()=3.4E-24;score=85.4;query2-220;description=NmrA; hypothetical protein complement(4660167..4661015) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763385 YP_005235345.1 CDS STMMW_43461 NC_016854.1 4661103 4661489 D pfam_scan;Pfam:PF01638; E()=1.3E-30;score=104.8;query 29-116;description=DUF24; hypothetical protein 4661103..4661489 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763386 YP_005235346.1 CDS STMMW_43471 NC_016854.1 4661547 4663490 R pfam_scan;Pfam:PF00149; E()=6.5E-24;score=83.5;query24- 259;description=Metallophos; pfam_scan;Pfam:PF02872; E()=1.0E-24;score=86.7;query368- 550;description=5_nucleotid_C; 2,3-cyclic-nucleotide 2'phosphodiesterase complement(4661547..4663490) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763387 YP_005235347.1 CDS STMMW_43481 NC_016854.1 4663758 4664498 D pfam_scan;Pfam:PF00459; E()=2.0E-61;score=207.4;query 2-239;description=Inositol_P; cysQ protein 4663758..4664498 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763388 YP_005235348.1 CDS STMMW_43491 NC_016854.1 4664488 4665045 R pfam_scan;Pfam:PF09695; E()=3.2E-83;score=276.9;query 10-181;description=YtfJ_HI0045; hypothetical protein complement(4664488..4665045) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763389 YP_005235349.1 CDS STMMW_43501 NC_016854.1 4665306 4665578 D pfam_scan;Pfam:PF06526; E()=8.0E-30;score=101.6;query 23-86;description=DUF1107; hypothetical protein 4665306..4665578 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763390 YP_005235350.1 CDS STMMW_43511 NC_016854.1 4665663 4667006 R pfam_scan;Pfam:PF01595; E()=5.0E-46;score=156.0;query 5-197;description=DUF21; pfam_scan;Pfam:PF00571; E()=6.1E-14;score=51.8;query216-332;description=CBS; pfam_scan;Pfam:PF03471; E()=2.4E-22;score=77.9;query348-425;description=CorC_HlyC; tmhmm; query 1-448; hypothetical protein complement(4665663..4667006) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763391 YP_005235351.1 CDS STMMW_43521 NC_016854.1 4667189 4667827 R pfam_scan;Pfam:PF01625; E()=1.8E-63;score=212.5;query 45-200;description=PMSR; peptide methionine sulfoxide reductase complement(4667189..4667827) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763392 YP_005235352.1 CDS STMMW_43531 NC_016854.1 4668040 4669773 D pfam_scan;Pfam:PF07244; E()=6.6E-9;score=36.1;query 189-247;description=Surf_Ag_VNR; pfam_scan;Pfam:PF01103; E()=7.4E-74;score=248.3;query 290-576;description=Bac_surface_Ag; hypothetical protein 4668040..4669773 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763393 YP_005235353.1 CDS STMMW_43541 NC_016854.1 4669770 4673549 D pfam_scan;Pfam:PF04357; E()=2.7E-89;score=299.5;query 923-1259;description=DUF490; tmhmm; query 1-1260; hypothetical protein 4669770..4673549 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763394 YP_005235354.1 CDS STMMW_43551 NC_016854.1 4673552 4673896 D pfam_scan;Pfam:PF06094; E()=9.8E-21;score=73.6;query3-94;description=AIG2; hypothetical protein 4673552..4673896 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763395 YP_005235355.1 CDS STMMW_43561 NC_016854.1 4673950 4675158 R pfam_scan;Pfam:PF07690; E()=1.2E-55;score=188.8;query 14-353;description=MFS_1; tmhmm; query 1-403; putative sugar transporter complement(4673950..4675158) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763396 YP_005235356.1 CDS STMMW_43571 NC_016854.1 4675155 4676318 R pfam_scan;Pfam:PF01979; E()=3.0E-7;score=30.1;query 54-338;description=Amidohydro_1; hypothetical protein complement(4675155..4676318) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763397 YP_005235357.1 CDS STMMW_43581 NC_016854.1 4676728 4677258 R pfam_scan;Pfam:PF00719; E()=1.2E-66;score=222.8;query 17-174;description=Pyrophosphatase; inorganic pyrophosphatase complement(4676728..4677258) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763398 YP_005235358.1 CDS STMMW_43591 NC_016854.1 4677485 4678483 R pfam_scan;Pfam:PF00316; E()=4.6E-145;score=481.8;query 3-328;description=FBPase; fructose-1,6-bisphosphatase complement(4677485..4678483) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763399 YP_005235359.1 CDS STMMW_43601 NC_016854.1 4678658 4680037 D pfam_scan;Pfam:PF08245; E()=1.0E-16;score=61.2;query107- 291;description=Mur_ligase_M; pfam_scan;Pfam:PF01225; E()=3.2E-12;score=46.0;query2-100;description=Mur_ligase; pfam_scan;Pfam:PF02875; E()=7.3E-10;score=38.6;query312- 362;description=Mur_ligase_C; murein peptide ligase 4678658..4680037 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763400 YP_005235360.1 CDS STMMW_43611 NC_016854.1 4680528 4681361 D pfam_scan;Pfam:PF01380; E()=7.7E-28;score=96.6;query145-270;description=SIS; pfam_scan;Pfam:PF01418; E()=1.2E-13;score=50.5;query12-86;description=HTH_6; putative transcriptional regulator 4680528..4681361 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763401 YP_005235361.1 CDS STMMW_43621 NC_016854.1 4681412 4682845 R pfam_scan;Pfam:PF00083; E()=3.0E-102;score=342.1;query 17-457;description=Sugar_tr; tmhmm; query 1-478; putative sugar transport protein complement(4681412..4682845) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763402 YP_005235362.1 CDS STMMW_43631 NC_016854.1 4683304 4684740 D pfam_scan;Pfam:PF00083; E()=1.4E-94;score=316.8;query 15-461;description=Sugar_tr; tmhmm; query 1-479; putative sugar transport protein 4683304..4684740 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763403 YP_005235363.1 CDS STMMW_43641 NC_016854.1 4685093 4685902 R pfam_scan;Pfam:PF04962; E()=5.7E-113;score=376.2;query 10-262;description=KduI; putative isomerase complement(4685093..4685902) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763404 YP_005235364.1 CDS STMMW_43651 NC_016854.1 4685927 4687432 R pfam_scan;Pfam:PF00171; E()=2.7E-136;score=454.0;query 16-481;description=Aldedh; methylmalonate-semialdehyde dehydrogenase complement(4685927..4687432) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763405 YP_005235365.1 CDS STMMW_43661 NC_016854.1 4687448 4687750 R hypothetical protein complement(4687448..4687750) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763406 YP_005235366.1 CDS STMMW_43671 NC_016854.1 4687873 4688697 D pfam_scan;Pfam:PF02311; E()=1.2E-8;score=34.4;query 18-132;description=AraC_binding; pfam_scan;Pfam:PF00165; E()=3.5E-5;score=23.3;query 175-208;description=HTH_AraC; putative DNA-binding protein 4687873..4688697 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763407 YP_005235367.1 CDS STMMW_43681 NC_016854.1 4688957 4689877 D pfam_scan;Pfam:PF01261; E()=4.8E-36;score=123.6;query 41-256;description=AP_endonuc_2; inosose dehydratase 4688957..4689877 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763408 YP_005235368.1 CDS STMMW_43691 NC_016854.1 4689896 4690906 D pfam_scan;Pfam:PF02894; E()=1.4E-9;score=37.3;query 137-236;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=1.5E-31;score=108.6;query 3-124;description=GFO_IDH_MocA; inositol 2-dehydrogenase 4689896..4690906 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763409 YP_005235369.1 CDS STMMW_43701 NC_016854.1 4691003 4692346 D pfam_scan;Pfam:PF02055; E()=2.3E-70;score=236.7;query 32-417;description=Glyco_hydro_30; O-glycosyl hydrolase family 30 4691003..4692346 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763410 YP_005235370.1 CDS STMMW_43711 NC_016854.1 4692347 4693180 D pfam_scan;Pfam:PF01261; E()=1.9E-28;score=98.8;query23- 228;description=AP_endonuc_2; myo-inositol catabolism protein 4692347..4693180 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763411 YP_005235371.1 CDS STMMW_43721 NC_016854.1 4693177 4694343 R pfam_scan;Pfam:PF07690; E()=9.5E-19;score=67.5;query17-267;description=MFS_1; tmhmm; query 1-389; hypothetical protein complement(4693177..4694343) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763412 YP_005235372.1 CDS STMMW_43731 NC_016854.1 4694404 4696341 R pfam_scan;Pfam:PF09863; E()=1.0E-134;score=447.8;query 333-641;description=DUF2090; pfam_scan;Pfam:PF00294; E()=1.1E-48;score=165.7;query 15-331;description=PfkB; putative carbohydrate kinase complement(4694404..4696341) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763413 YP_005235373.1 CDS STMMW_43741 NC_016854.1 4696758 4698698 D pfam_scan;Pfam:PF00205; E()=4.1E-36;score=123.0;query 219-353;description=TPP_enzyme_M; pfam_scan;Pfam:PF02776; E()=2.3E-24;score=85.7;query7- 195;description=TPP_enzyme_N; pfam_scan;Pfam:PF02775; E()=1.4E-36;score=125.3;query 442-601;description=TPP_enzyme_C; putative malonic semialdehyde oxidative decarboxylase 4696758..4698698 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763414 YP_005235374.1 CDS STMMW_43751 NC_016854.1 4698879 4699901 D pfam_scan;Pfam:PF02894; E()=1.7E-5;score=24.2;query 138-242;description=GFO_IDH_MocA_C; pfam_scan;Pfam:PF01408; E()=1.1E-24;score=86.5;query4- 125;description=GFO_IDH_MocA; dehydrogenase 4698879..4699901 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759392 YP_005235375.1 CDS STMMW_43761 NC_016854.1 4699974 4701200 D pfam_scan;Pfam:PF07690; E()=1.2E-17;score=63.9;query23-273;description=MFS_1; tmhmm; query 1-409; alpha-ketoglutarate permease 4699974..4701200 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759393 YP_005235376.1 CDS STMMW_43771 NC_016854.1 4701361 4702176 D pfam_scan;Pfam:PF01261; E()=3.4E-24;score=84.9;query24- 206;description=AP_endonuc_2; xylose isomerase 4701361..4702176 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759394 YP_005235377.1 CDS STMMW_43781 NC_016854.1 4702229 4703113 D pfam_scan;Pfam:PF01261; E()=1.9E-30;score=105.3;query 20-238;description=AP_endonuc_2; putative endonuclease 4702229..4703113 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759395 YP_005235378.1 CDS STMMW_43791 NC_016854.1 4703169 4703720 R pfam_scan;Pfam:PF04751; E()=2.7E-63;score=212.0;query 21-177;description=DUF615; hypothetical protein complement(4703169..4703720) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759396 YP_005235379.1 CDS STMMW_43801 NC_016854.1 4703816 4705168 D pfam_scan;Pfam:PF01523; E()=3.9E-73;score=246.1;query 34-327;description=PmbA_TldD; putative PmbA protein 4703816..4705168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759397 YP_005235380.1 CDS STMMW_43811 NC_016854.1 4705267 4705653 D pfam_scan;Pfam:PF07361; E()=2.4E-34;score=117.1;query 23-128;description=Cytochrom_B562; tmhmm; query 1-129; soluble cytochrome b562 4705267..4705653 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759398 YP_005235381.1 CDS STMMW_43831 NC_016854.1 4705931 4706269 D pfam_scan;Pfam:PF00874; E()=2.2E-5;score=24.1;query 37-106;description=PRD; hypothetical protein 4705931..4706269 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759400 YP_005235382.1 CDS STMMW_43841 NC_016854.1 4706280 4706642 D hypothetical protein 4706280..4706642 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759401 YP_005235383.1 CDS STMMW_43851 NC_016854.1 4706642 4706944 D hypothetical protein 4706642..4706944 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759402 YP_005235384.1 CDS STMMW_43861 NC_016854.1 4706967 4707743 D tmhmm; query 1-259; hypothetical protein 4706967..4707743 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759403 YP_005235385.1 CDS STMMW_43871 NC_016854.1 4707755 4708399 D tmhmm; query 1-215; hypothetical protein 4707755..4708399 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759404 YP_005235386.1 CDS STMMW_43881 NC_016854.1 4708458 4709591 D pfam_scan;Pfam:PF01979; E()=3.5E-9;score=36.5;query 47-329;description=Amidohydro_1; hypothetical protein 4708458..4709591 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759405 YP_005235387.1 CDS STMMW_43891 NC_016854.1 4709575 4710693 D pfam_scan;Pfam:PF03841; E()=5.3E-14;score=51.3;query100-267;description=SelA; hypothetical protein 4709575..4710693 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759406 YP_005235388.1 CDS STMMW_43901 NC_016854.1 4710690 4711430 D pfam_scan;Pfam:PF07071; E()=1.2E-116;score=387.4;query 8-224;description=DUF1341; hypothetical protein 4710690..4711430 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759407 YP_005235389.1 CDS STMMW_43921 NC_016854.1 4711387 4713360 D pfam_scan;Pfam:PF00359; E()=6.1E-23;score=80.8;query516- 647;description=PTS_EIIA_2; pfam_scan;Pfam:PF00874; E()=3.2E-6;score=26.7;query 216-298;description=PRD; pfam_scan;Pfam:PF05043; E()=6.9E-8;score=31.9;query 111-186;description=Mga; pfam_scan;Pfam:PF08279; E()=1.2E-9;score=37.3;query 27-83;description=HTH_11; putative BglB family transcriptional antiterminator 4711387..4713360 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759408 YP_005235390.1 CDS STMMW_43931 NC_016854.1 4713438 4713680 D pfam_scan;Pfam:PF04221; E()=2.2E-15;score=56.1;query1-67;description=RelB; RelB protein 4713438..4713680 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759409 YP_005235391.1 CDS STMMW_43941 NC_016854.1 4713670 4713954 D pfam_scan;Pfam:PF05016; E()=2.0E-13;score=50.6;query5- 82;description=Plasmid_stabil; hypothetical protein 4713670..4713954 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759410 YP_005235392.1 CDS STMMW_43951 NC_016854.1 4713958 4714422 R anaerobic ribonucleoside-triphosphate reductase activating protein complement(4713958..4714422) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759411 YP_005235393.1 CDS STMMW_43961 NC_016854.1 4714543 4716681 R pfam_scan;Pfam:PF03477; E()=3.2E-22;score=78.3;query4-89;description=ATP-cone; pfam_scan;Pfam:PF01228; E()=1.2E-23;score=82.7;query582- 685;description=Gly_radical; anaerobic ribonucleoside-triphosphate reductase complement(4714543..4716681) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759412 YP_005235394.1 CDS STMMW_43971 NC_016854.1 4716886 4717056 D hypothetical protein 4716886..4717056 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759413 YP_005235395.1 CDS STMMW_43981 NC_016854.1 4717090 4718742 R pfam_scan;Pfam:PF00128; E()=8.8E-104;score=346.6;query 14-389;description=Alpha-amylase; trehalose-6-phosphate hydrolase complement(4717090..4718742) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759414 YP_005235396.1 CDS STMMW_44001 NC_016854.1 4720347 4721294 R pfam_scan;Pfam:PF00356; E()=3.1E-19;score=68.2;query6-51;description=LacI; pfam_scan;Pfam:PF00532; E()=2.7E-12;score=46.0;query84- 313;description=Peripla_BP_1; trehalose operon repressor complement(4720347..4721294) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759416 YP_005235397.1 CDS STMMW_44011 NC_016854.1 4721678 4724386 D pfam_scan;Pfam:PF00689; E()=2.6E-17;score=62.5;query727- 892;description=Cation_ATPase_C; pfam_scan;Pfam:PF00690; E()=2.8E-13;score=48.8;query52- 116;description=Cation_ATPase_N; pfam_scan;Pfam:PF00702; E()=1.7E-18;score=67.1;query371-660;description=Hydrolase; pfam_scan;Pfam:PF00122; E()=9.6E-57;score=191.6;query 127-366;description=E1-E2_ATPase; tmhmm; query 1-903; Mg(2+) transport ATPase, P-type 4721678..4724386 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759417 YP_005235398.1 CDS STMMW_44021 NC_016854.1 4724502 4724948 R pfam_scan;Pfam:PF01527; E()=3.7E-9;score=36.3;query 3-48;description=Transposase_8; tmhmm; query 1-149; hypothetical protein complement(4724502..4724948) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759418 YP_005235399.1 CDS STMMW_44031 NC_016854.1 4725023 4725409 R pfam_scan;Pfam:PF01042; E()=7.6E-48;score=160.9;query 7-126;description=Ribonuc_L-PSP; hypothetical protein complement(4725023..4725409) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759419 YP_005235400.1 CDS STMMW_44041 NC_016854.1 4725486 4725947 R pfam_scan;Pfam:PF02748; E()=2.5E-18;score=64.4;query101-150;description=PyrI_C; pfam_scan;Pfam:PF01948; E()=5.3E-37;score=125.4;query 5-97;description=PyrI; aspartate carbamoyltransferase regulatory subunit complement(4725486..4725947) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759420 YP_005235401.1 CDS STMMW_44051 NC_016854.1 4725960 4726895 R pfam_scan;Pfam:PF00185; E()=3.8E-37;score=127.5;query 154-304;description=OTCace; pfam_scan;Pfam:PF02729; E()=8.1E-45;score=151.7;query 8-148;description=OTCace_N; aspartate carbamoyltransferase catalytic subunit complement(4725960..4726895) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759421 YP_005235402.1 CDS STMMW_44061 NC_016854.1 4726931 4727032 R pfam_scan;Pfam:PF08052; E()=1.1E-19;score=69.2;query1-33;description=PyrBI_leader; pyrBI operon leader peptide complement(4726931..4727032) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759422 YP_005235403.1 CDS STMMW_44081 NC_016854.1 4727122 4727610 R pfam_scan;Pfam:PF02863; E()=9.3E-16;score=56.7;query87- 154;description=Arg_repressor_C; pfam_scan;Pfam:PF01316; E()=6.7E-14;score=51.0;query13- 76;description=Arg_repressor; putative transcriptional regulator complement(4727122..4727610) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759423 YP_005235404.1 CDS STMMW_44091 NC_016854.1 4727797 4729200 R pfam_scan;Pfam:PF03606; E()=1.8E-124;score=415.5;query 6-463;description=DcuC; tmhmm; query 1-468; hypothetical protein complement(4727797..4729200) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759424 YP_005235405.1 CDS STMMW_44101 NC_016854.1 4729256 4730260 R pfam_scan;Pfam:PF00185; E()=2.9E-47;score=160.4;query 158-330;description=OTCace; pfam_scan;Pfam:PF02729; E()=7.7E-46;score=155.0;query 8-149;description=OTCace_N; ornithine carbamoyltransferase complement(4729256..4730260) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759425 YP_005235406.1 CDS STMMW_44111 NC_016854.1 4730372 4731304 R pfam_scan;Pfam:PF00696; E()=6.2E-24;score=84.6;query6-276;description=AA_kinase; carbamate kinase complement(4730372..4731304) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759426 YP_005235407.1 CDS STMMW_44121 NC_016854.1 4731315 4732535 R pfam_scan;Pfam:PF02274; E()=4.5E-130;score=433.3;query 8-403;description=Amidinotransf; arginine deiminase complement(4731315..4732535) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759427 YP_005235408.1 CDS STMMW_44131 NC_016854.1 4732636 4732827 D tmhmm; query 1-64; hypothetical protein 4732636..4732827 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759428 YP_005235409.1 CDS STMMW_44141 NC_016854.1 4733211 4733663 D pfam_scan;Pfam:PF04074; E()=6.8E-50;score=168.5;query 1-149;description=DUF386; hypothetical protein 4733211..4733663 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759429 YP_005235410.1 CDS STMMW_44151 NC_016854.1 4733737 4734741 R pfam_scan;Pfam:PF00185; E()=2.0E-47;score=160.9;query 156-330;description=OTCace; pfam_scan;Pfam:PF02729; E()=1.1E-48;score=164.2;query 8-148;description=OTCace_N; ornithine carbamoyltransferase complement(4733737..4734741) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759430 YP_005235411.1 CDS STMMW_44161 NC_016854.1 4734907 4735323 D pfam_scan;Pfam:PF06877; E()=1.5E-37;score=127.5;query 9-113;description=DUF1260; hypothetical protein 4734907..4735323 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759431 YP_005235412.1 CDS STMMW_44171 NC_016854.1 4735335 4736147 D pfam_scan;Pfam:PF06175; E()=1.5E-99;score=330.7;query 21-264;description=MiaE; tRNA hydroxylase 4735335..4736147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759432 YP_005235413.1 CDS STMMW_44181 NC_016854.1 4736381 4736869 R Signal peptide; signalp; query 1-23;cleavage_site_probability=0.993; 0.999; hypothetical protein complement(4736381..4736869) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759433 YP_005235414.1 CDS STMMW_44191 NC_016854.1 4736976 4737479 R pfam_scan;Pfam:PF00583; E()=4.9E-16;score=58.1;query66- 145;description=Acetyltransf_1; putative acetyltransferase complement(4736976..4737479) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759434 YP_005235415.1 CDS STMMW_44201 NC_016854.1 4737674 4738861 D pfam_scan;Pfam:PF05987; E()=1.1E-83;score=280.8;query 16-378;description=DUF898; tmhmm; query 1-396; putative innner membrane protein 4737674..4738861 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759435 YP_005235416.1 CDS STMMW_44211 NC_016854.1 4739003 4741858 R pfam_scan;Pfam:PF00133; E()=2.3E-211;score=702.7;query 14-631;description=tRNA-synt_1; pfam_scan;Pfam:PF10458; E()=1.0E-17;score=63.2;query886-944;description=Val_tRNA- synt_C; pfam_scan;Pfam:PF08264; E()=3.5E-43;score=146.6;query 674-825;description=Anticodon_1; valyl-tRNA synthetase complement(4739003..4741858) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759436 YP_005235417.1 CDS STMMW_44221 NC_016854.1 4741858 4742340 R pfam_scan;Pfam:PF04364; E()=2.0E-43;score=146.9;query 14-156;description=DNA_pol3_chi; DNA polymerase III subunit chi complement(4741858..4742340) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759437 YP_005235418.1 CDS STMMW_44231 NC_016854.1 4742438 4743949 R pfam_scan;Pfam:PF00883; E()=1.1E-132;score=441.6;query 185-490;description=Peptidase_M17; pfam_scan;Pfam:PF02789; E()=2.6E-34;score=117.8;query 19-147;description=Peptidase_M17_N; cytosol aminopeptidase complement(4742438..4743949) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759438 YP_005235419.1 CDS STMMW_44241 NC_016854.1 4743993 4744112 R hypothetical protein complement(4743993..4744112) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759439 YP_005235420.1 CDS STMMW_44251 NC_016854.1 4744344 4745444 D pfam_scan;Pfam:PF03739; E()=6.5E-78;score=261.5;query 5-345;description=YjgP_YjgQ; tmhmm; query 1-367; putative inner membrane protein 4744344..4745444 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759440 YP_005235421.1 CDS STMMW_44261 NC_016854.1 4745444 4746526 D pfam_scan;Pfam:PF03739; E()=2.7E-84;score=282.4;query 9-358;description=YjgP_YjgQ; tmhmm; query 1-361; putative inner membrane protein 4745444..4746526 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759441 YP_005235422.1 CDS STMMW_44271 NC_016854.1 4746721 4747719 R pfam_scan;Pfam:PF00356; E()=1.3E-17;score=63.1;query7-52;description=LacI; pfam_scan;Pfam:PF00532; E()=1.2E-22;score=80.0;query65- 313;description=Peripla_BP_1; regulatory protein complement(4746721..4747719) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759442 YP_005235423.1 CDS STMMW_44281 NC_016854.1 4747783 4749003 R pfam_scan;Pfam:PF02447; E()=6.8E-173;score=575.0;query 1-403;description=GntP_permease; tmhmm; query 1-407; gnt-ii system l-idonate transporter (l-ido transporter) complement(4747783..4749003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759443 YP_005235424.1 CDS STMMW_44291 NC_016854.1 4749164 4749928 R pfam_scan;Pfam:PF00106; E()=5.5E-27;score=94.4;query11-174;description=adh_short; gluconate 5-dehydrogenase complement(4749164..4749928) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759444 YP_005235425.1 CDS STMMW_44301 NC_016854.1 4749953 4750984 R pfam_scan;Pfam:PF08240; E()=3.4E-27;score=93.9;query30-139;description=ADH_N; pfam_scan;Pfam:PF00107; E()=1.3E-29;score=102.7;query 170-304;description=ADH_zinc_N; l-idonate 5-dehydrogenase complement(4749953..4750984) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759445 YP_005235426.1 CDS STMMW_44311 NC_016854.1 4751201 4751731 D pfam_scan;Pfam:PF01202; E()=6.4E-8;score=32.4;query 13-162;description=SKI; thermosensitive gluconokinase 4751201..4751731 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759446 YP_005235427.1 CDS STMMW_44321 NC_016854.1 4751759 4752778 R pfam_scan;Pfam:PF08240; E()=4.4E-28;score=96.7;query28-138;description=ADH_N; pfam_scan;Pfam:PF00107; E()=7.0E-29;score=100.3;query 170-300;description=ADH_zinc_N; putative alcohol dehydrogenase complement(4751759..4752778) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759447 YP_005235428.1 CDS STMMW_44341 NC_016854.1 4753953 4757468 D superfamily I DNA helicase 4753953..4757468 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759449 YP_005235429.1 CDS STMMW_44351 NC_016854.1 4757565 4758554 D pfam_scan;Pfam:PF04471; E()=1.1E-8;score=35.1;query 204-293;description=Mrr_cat; putative restriction endonuclease 4757565..4758554 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759450 YP_005235430.1 CDS STMMW_44361 NC_016854.1 4758667 4760751 R pfam_scan;Pfam:PF05362; E()=2.2E-13;score=49.9;query515-689;description=Lon_C; putative ATP-dependent Lon protease complement(4758667..4760751) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759451 YP_005235431.1 CDS STMMW_44371 NC_016854.1 4760762 4763365 R pfam_scan;Pfam:PF08665; E()=2.1E-70;score=236.3;query 476-651;description=PglZ; hypothetical protein complement(4760762..4763365) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759452 YP_005235432.1 CDS STMMW_44381 NC_016854.1 4763362 4764183 R hypothetical protein complement(4763362..4764183) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759453 YP_005235433.1 CDS STMMW_44391 NC_016854.1 4764161 4765252 R pfam_scan;Pfam:PF00005; E()=1.5E-5;score=24.6;query 33-53;description=ABC_tran; putative ABC-type sugar/spermidine/putrescine transport systems, atpase component complement(4764161..4765252) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759454 YP_005235434.1 CDS STMMW_44401 NC_016854.1 4765252 4768929 R pfam_scan;Pfam:PF02384; E()=1.2E-8;score=34.1;query 500-640;description=N6_Mtase; type II restriction enzyme complement(4765252..4768929) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759455 YP_005235435.1 CDS STMMW_44411 NC_016854.1 4768975 4772616 R pfam_scan;Pfam:PF07693; E()=2.8E-5;score=23.2;query 64-322;description=KAP_NTPase; putative ATPase complement(4768975..4772616) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759456 YP_005235436.1 CDS STMMW_44421 NC_016854.1 4772628 4773230 R pfam_scan;Pfam:PF08747; E()=2.6E-45;score=153.1;query 64-188;description=DUF1788; hypothetical protein complement(4772628..4773230) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759458 YP_005235437.1 CDS STMMW_44431 NC_016854.1 4773227 4773829 R pfam_scan;Pfam:PF08849; E()=1.2E-62;score=210.2;query 4-192;description=DUF1819; putative inner membrane protein complement(4773227..4773829) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759459 YP_005235438.1 CDS STMMW_44451 NC_016854.1 4774655 4775380 R pfam_scan;Pfam:PF01709; E()=2.6E-81;score=272.2;query 6-238;description=DUF28; hypothetical protein complement(4774655..4775380) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759461 YP_005235439.1 CDS STMMW_44461 NC_016854.1 4775931 4777562 R pfam_scan;Pfam:PF08241; E()=6.5E-16;score=58.0;query72- 168;description=Methyltransf_11; hypothetical protein complement(4775931..4777562) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759462 YP_005235440.1 CDS STMMW_44471 NC_016854.1 4777567 4777824 R pfam_scan;Pfam:PF09857; E()=3.4E-40;score=135.2;query 1-85;description=DUF2084; hypothetical protein complement(4777567..4777824) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759463 YP_005235441.1 CDS STMMW_44481 NC_016854.1 4778313 4778921 D pfam_scan;Pfam:PF06353; E()=6.2E-53;score=178.5;query 36-179;description=DUF1062; hypothetical protein 4778313..4778921 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759464 YP_005235442.1 CDS STMMW_44491 NC_016854.1 4779431 4780168 D Signal peptide; signalp; query 1-21;cleavage_site_probability=0.535; 0.559; putative inner membrane protein 4779431..4780168 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759465 YP_005235443.1 CDS STMMW_44501 NC_016854.1 4780444 4781355 D hypothetical protein 4780444..4781355 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759466 YP_005235444.1 CDS STMMW_44511 NC_016854.1 4781560 4782021 D pfam_scan;Pfam:PF03625; E()=9.8E-22;score=75.9;query62-123;description=DUF302; hypothetical protein 4781560..4782021 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759467 YP_005235445.1 CDS STMMW_44521 NC_016854.1 4782018 4782692 R pfam_scan;Pfam:PF01738; E()=6.5E-19;score=67.5;query27-212;description=DLH; hypothetical protein complement(4782018..4782692) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759468 YP_005235446.1 CDS STMMW_44531 NC_016854.1 4783042 4783815 D pfam_scan;Pfam:PF00392; E()=2.4E-22;score=78.1;query10-73;description=GntR; pfam_scan;Pfam:PF07729; E()=5.0E-23;score=81.0;query97-226;description=FCD; uxu operon transcriptional regulator 4783042..4783815 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759469 YP_005235447.1 CDS STMMW_44541 NC_016854.1 4783816 4784829 R pfam_scan;Pfam:PF00579; E()=5.7E-59;score=199.5;query 6-285;description=tRNA-synt_1b; tryptophanyl-tRNA synthetase complement(4783816..4784829) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759470 YP_005235448.1 CDS STMMW_44551 NC_016854.1 4785547 4786077 D pfam_scan;Pfam:PF05638; E()=7.4E-29;score=99.6;query33-155;description=DUF796; hypothetical protein 4785547..4786077 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759471 YP_005235449.1 CDS STMMW_44561 NC_016854.1 4786316 4787050 D pfam_scan;Pfam:PF01177; E()=5.8E-42;score=143.3;query 8-223;description=Asp_Glu_race; aspartate racemase 4786316..4787050 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759472 YP_005235450.1 CDS STMMW_44571 NC_016854.1 4787056 4787964 R pfam_scan;Pfam:PF00126; E()=1.4E-13;score=50.2;query15-72;description=HTH_1; pfam_scan;Pfam:PF03466; E()=1.7E-24;score=85.7;query102- 296;description=LysR_substrate; transcriptional activator complement(4787056..4787964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759473 YP_005235451.1 CDS STMMW_44581 NC_016854.1 4788083 4789255 R pfam_scan;Pfam:PF01979; E()=4.7E-5;score=23.0;query 59-113;description=Amidohydro_1; isoaspartyl dipeptidase complement(4788083..4789255) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759474 YP_005235452.1 CDS STMMW_44591 NC_016854.1 4789268 4789729 R pfam_scan;Pfam:PF07670; E()=2.1E-14;score=53.4;query27-110;description=Gate; tmhmm; query 1-154; hypothetical protein complement(4789268..4789729) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759475 YP_005235453.1 CDS STMMW_44601 NC_016854.1 4789726 4790610 R pfam_scan;Pfam:PF07670; E()=2.0E-13;score=50.3;query151-240;description=Gate; tmhmm; query 1-295; membrane protein complement(4789726..4790610) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759476 YP_005235454.1 CDS STMMW_44621 NC_016854.1 4791270 4792454 R pfam_scan;Pfam:PF06779; E()=6.1E-31;score=105.5;query 24-110;description=DUF1228; tmhmm; query 1-395; hypothetical protein complement(4791270..4792454) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759478 YP_005235455.1 CDS STMMW_44631 NC_016854.1 4792674 4793945 R pfam_scan;Pfam:PF04286; E()=5.2E-123;score=410.7;query 44-417;description=DUF445; tmhmm; query 1-424; hypothetical protein complement(4792674..4793945) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759479 YP_005235456.1 CDS STMMW_44641 NC_016854.1 4794032 4795273 R pfam_scan;Pfam:PF07690; E()=2.7E-32;score=112.1;query 26-355;description=MFS_1; tmhmm; query 1-414; putative sugar transport protein complement(4794032..4795273) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759480 YP_005235457.1 CDS STMMW_44651 NC_016854.1 4795752 4796255 D pfam_scan;Pfam:PF04754; E()=1.1E-12;score=47.2;query8- 42;description=Transposase_31; putative inner membrane protein 4795752..4796255 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759481 YP_005235458.1 CDS STMMW_44661 NC_016854.1 4796436 4797806 D pfam_scan;Pfam:PF00171; E()=1.2E-139;score=465.1;query 3-451;description=Aldedh; putative aldehyde dehydrogenase 4796436..4797806 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759482 YP_005235459.1 CDS STMMW_44671 NC_016854.1 4797901 4798044 R hypothetical protein complement(4797901..4798044) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759483 YP_005235460.1 CDS STMMW_44681 NC_016854.1 4798250 4798951 R tmhmm; query 1-234; putative inner membrane protein complement(4798250..4798951) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759484 YP_005235461.1 CDS STMMW_44691 NC_016854.1 4799025 4799357 R pfam_scan;Pfam:PF08845; E()=1.2E-20;score=72.2;query20-71;description=DUF1813; endoribonuclease complement(4799025..4799357) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759485 YP_005235462.1 CDS STMMW_44701 NC_016854.1 4799584 4800993 R pfam_scan;Pfam:PF01420; E()=6.3E-17;score=61.7;query7-186;description=Methylase_S; type I restriction enzyme complement(4799584..4800993) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759486 YP_005235463.1 CDS STMMW_44711 NC_016854.1 4800990 4802579 R pfam_scan;Pfam:PF02384; E()=4.2E-85;score=285.2;query 123-448;description=N6_Mtase; type I restriction enzyme complement(4800990..4802579) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759487 YP_005235464.1 CDS STMMW_44721 NC_016854.1 4802737 4806246 R pfam_scan;Pfam:PF04313; E()=2.3E-7;score=30.9;query 239-391;description=HSDR_N; pfam_scan;Pfam:PF04851; E()=6.7E-37;score=126.4;query 442-621;description=ResIII; pfam_scan;Pfam:PF00271; E()=8.8E-8;score=31.2;query 765-828;description=Helicase_C; type III restriction enzyme complement(4802737..4806246) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759488 YP_005235465.1 CDS STMMW_44731 NC_016854.1 4806444 4807358 D pfam_scan;Pfam:PF04471; E()=3.8E-26;score=91.1;query175-278;description=Mrr_cat; mrr restriction system protein 4806444..4807358 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759489 YP_005235466.1 CDS STMMW_44741 NC_016854.1 4807627 4807914 D pfam_scan;Pfam:PF04365; E()=7.7E-25;score=86.6;query7-89;description=DUF497; hypothetical protein 4807627..4807914 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759490 YP_005235467.1 CDS STMMW_44751 NC_016854.1 4807901 4808203 D hypothetical protein 4807901..4808203 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759491 YP_005235468.1 CDS STMMW_44761 NC_016854.1 4808278 4809234 R pfam_scan;Pfam:PF07683; E()=1.2E-20;score=72.5;query224-313;description=CobW_C; pfam_scan;Pfam:PF02492; E()=5.1E-50;score=169.4;query 6-183;description=cobW; hypothetical protein complement(4808278..4809234) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759492 YP_005235469.1 CDS STMMW_44771 NC_016854.1 4809245 4809448 R pfam_scan;Pfam:PF04328; E()=1.1E-29;score=101.0;query 1-67;description=DUF466; hypothetical protein complement(4809245..4809448) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759493 YP_005235470.1 CDS STMMW_44781 NC_016854.1 4809543 4811693 R pfam_scan;Pfam:PF02554; E()=3.1E-163;score=542.6;query 35-420;description=CstA; tmhmm; query 1-717; carbon starvation protein complement(4809543..4811693) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759494 YP_005235471.1 CDS STMMW_44791 NC_016854.1 4812060 4813721 D pfam_scan;Pfam:PF00672; E()=2.4E-13;score=49.3;query197-263;description=HAMP; pfam_scan;Pfam:PF02203; E()=1.9E-41;score=140.8;query 44-179;description=TarH; pfam_scan;Pfam:PF00015; E()=2.2E-73;score=246.1;query 324-518;description=MCPsignal; tmhmm; query 1-554; methyl-accepting chemotaxis protein 4812060..4813721 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759495 YP_005235472.1 CDS STMMW_44801 NC_016854.1 4814045 4816810 D pfam_scan;Pfam:PF00158; E()=3.7E-38;score=130.5;query 107-269;description=Sigma54_activat; pfam_scan;Pfam:PF00874; E()=2.8E-8;score=33.3;query 827-906;description=PRD; pfam_scan;Pfam:PF03610; E()=7.7E-5;score=22.1;query 563-633;description=EIIA-man; Putative transcriptional regulatory protein 4814045..4816810 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759496 YP_005235473.1 CDS STMMW_44811 NC_016854.1 4816912 4817334 D pfam_scan;Pfam:PF03610; E()=9.3E-17;score=60.5;query5-105;description=EIIA-man; PTS transport system, IIA component 4816912..4817334 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759497 YP_005235474.1 CDS STMMW_44821 NC_016854.1 4817349 4817810 D pfam_scan;Pfam:PF03830; E()=2.3E-51;score=173.3;query 1-150;description=PTSIIB_sorb; PTS transport system, IIB component 4817349..4817810 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759498 YP_005235475.1 CDS STMMW_44831 NC_016854.1 4817836 4818615 D pfam_scan;Pfam:PF03609; E()=2.0E-69;score=233.4;query 2-233;description=EII-Sor; tmhmm; query 1-260; PTS transport system, IIC component 4817836..4818615 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759499 YP_005235476.1 CDS STMMW_44841 NC_016854.1 4818605 4819441 D pfam_scan;Pfam:PF03613; E()=9.5E-112;score=372.1;query 16-278;description=EIID-AGA; tmhmm; query 1-279; PTS transport system, IID component 4818605..4819441 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759500 YP_005235477.1 CDS STMMW_44851 NC_016854.1 4819454 4820515 D pfam_scan;Pfam:PF01380; E()=2.2E-13;score=49.8;query40-164;description=SIS; putative sugar isomerase 4819454..4820515 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759501 YP_005235478.1 CDS STMMW_44861 NC_016854.1 4820533 4821543 D pfam_scan;Pfam:PF01380; E()=1.3E-14;score=53.7;query58-135;description=SIS; putative sugar isomerase 4820533..4821543 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759502 YP_005235479.1 CDS STMMW_44871 NC_016854.1 4821677 4823869 R pfam_scan;Pfam:PF00884; E()=1.0E-25;score=89.7;query130-434;description=Sulfatase; tmhmm; query 1-731; putative phosphoglycerol transferase complement(4821677..4823869) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759503 YP_005235480.1 CDS STMMW_44881 NC_016854.1 4824251 4824712 R pfam_scan;Pfam:PF10696; E()=1.9E-46;score=157.6;query 6-152;description=DUF2501; tmhmm; query 1-154; hypothetical protein complement(4824251..4824712) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759504 YP_005235481.1 CDS STMMW_44891 NC_016854.1 4824770 4825507 R pfam_scan;Pfam:PF01695; E()=2.9E-17;score=62.4;query97-218;description=IstB; DNA replication protein complement(4824770..4825507) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759505 YP_005235482.1 CDS STMMW_44901 NC_016854.1 4825510 4826049 R primosomal protein I complement(4825510..4826049) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759506 YP_005235483.1 CDS STMMW_44911 NC_016854.1 4826142 4826615 R pfam_scan;Pfam:PF06738; E()=3.7E-5;score=22.8;query 14-99;description=DUF1212; tmhmm; query 1-158; hypothetical protein complement(4826142..4826615) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759507 YP_005235484.1 CDS STMMW_44921 NC_016854.1 4826606 4827517 R pfam_scan;Pfam:PF06738; E()=1.4E-50;score=171.0;query 63-254;description=DUF1212; tmhmm; query 1-304; hypothetical protein complement(4826606..4827517) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759508 YP_005235485.1 CDS STMMW_44931 NC_016854.1 4828095 4828820 D pfam_scan;Pfam:PF00196; E()=1.7E-10;score=39.9;query155-208;description=GerE; regulatory protein 4828095..4828820 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759509 YP_005235486.1 CDS STMMW_44941 NC_016854.1 4828781 4829455 D pfam_scan;Pfam:PF00196; E()=5.4E-14;score=51.0;query151-204;description=GerE; regulatory protein 4828781..4829455 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759510 YP_005235487.1 CDS STMMW_44951 NC_016854.1 4829506 4829964 R pfam_scan;Pfam:PF04073; E()=3.8E-32;score=110.1;query 25-140;description=YbaK; hypothetical protein complement(4829506..4829964) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759511 YP_005235488.1 CDS STMMW_44961 NC_016854.1 4830115 4830903 R pfam_scan;Pfam:PF11575; E()=8.5E-7;score=27.8;query 241-262;description=FhuF_C; pfam_scan;Pfam:PF06276; E()=4.4E-26;score=91.0;query93-223;description=FhuF; ferric iron reductase protein complement(4830115..4830903) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759512 YP_005235489.1 CDS STMMW_44971 NC_016854.1 4831024 4832088 R pfam_scan;Pfam:PF00990; E()=4.3E-48;score=162.6;query 190-344;description=GGDEF; tmhmm; query 1-355; hypothetical protein complement(4831024..4832088) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759513 YP_005235490.1 CDS STMMW_44981 NC_016854.1 4832339 4832575 D pfam_scan;Pfam:PF07256; E()=2.3E-37;score=126.1;query 1-78;description=DUF1435; tmhmm; query 1-79; hypothetical protein 4832339..4832575 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759514 YP_005235491.1 CDS STMMW_44991 NC_016854.1 4833116 4834144 R pfam_scan;Pfam:PF05175; E()=1.9E-63;score=212.5;query 167-333;description=MTS; pfam_scan;Pfam:PF08468; E()=2.6E-62;score=208.5;query 8-162;description=MTS_N; hypothetical protein complement(4833116..4834144) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759515 YP_005235492.1 CDS STMMW_45001 NC_016854.1 4834247 4834684 D pfam_scan;Pfam:PF03603; E()=8.0E-47;score=157.9;query 1-128;description=DNA_III_psi; DNA polymerase III subunit psi 4834247..4834684 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759516 YP_005235493.1 CDS STMMW_45011 NC_016854.1 4834629 4835075 D pfam_scan;Pfam:PF00583; E()=1.4E-19;score=69.5;query48- 120;description=Acetyltransf_1; ribosomal-protein-alanine acetyltransferase 4834629..4835075 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759517 YP_005235494.1 CDS STMMW_45021 NC_016854.1 4835094 4835774 D pfam_scan;Pfam:PF00702; E()=3.0E-28;score=98.9;query5-198;description=Hydrolase; hypothetical protein 4835094..4835774 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759518 YP_005235495.1 CDS STMMW_45031 NC_016854.1 4835866 4837455 D pfam_scan;Pfam:PF03144; E()=1.6E-10;score=40.7;query314- 380;description=GTP_EFTU_D2; pfam_scan;Pfam:PF00009; E()=2.9E-44;score=150.6;query 13-277;description=GTP_EFTU; peptide chain release factor 3 4835866..4837455 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759519 YP_005235496.1 CDS STMMW_45041 NC_016854.1 4837857 4838474 D pfam_scan;Pfam:PF04972; E()=6.3E-19;score=67.1;query64-126;description=BON; hypothetical protein 4837857..4838474 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759520 YP_005235497.1 CDS STMMW_45051 NC_016854.1 4838878 4839951 D pfam_scan;Pfam:PF01734; E()=2.6E-24;score=86.1;query27-195;description=Patatin; hypothetical protein 4838878..4839951 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759521 YP_005235498.1 CDS STMMW_45071 NC_016854.1 4840754 4841617 R pfam_scan;Pfam:PF00037; E()=1.9E-5;score=23.5;query 44-62;description=Fer4; pfam_scan;Pfam:PF04055; E()=2.9E-11;score=43.1;query28- 220;description=Radical_SAM; hypothetical protein complement(4840754..4841617) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759523 YP_005235499.1 CDS STMMW_45081 NC_016854.1 4841589 4843139 R pfam_scan;Pfam:PF11230; E()=9.7E-235;score=779.0;query 22-504;description=DUF3029; hypothetical protein complement(4841589..4843139) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759526 YP_005235500.1 CDS STMMW_45091 NC_016854.1 4843381 4844178 D pfam_scan;Pfam:PF01791; E()=2.1E-53;score=180.6;query 18-231;description=DeoC; deoxyribose-phosphate aldolase 4843381..4844178 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759527 YP_005235501.1 CDS STMMW_45101 NC_016854.1 4844302 4845624 D pfam_scan;Pfam:PF07831; E()=2.9E-21;score=74.7;query350-422;description=PYNP_C; pfam_scan;Pfam:PF00591; E()=6.2E-46;score=156.2;query 80-331;description=Glycos_transf_3; pfam_scan;Pfam:PF02885; E()=3.6E-16;score=58.0;query5- 68;description=Glycos_trans_3N; thymidine phosphorylase 4844302..4845624 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759528 YP_005235502.1 CDS STMMW_45111 NC_016854.1 4845676 4846899 D pfam_scan;Pfam:PF08342; E()=1.4E-30;score=105.3;query 3-107;description=PPM_N; pfam_scan;Pfam:PF01676; E()=3.7E-29;score=99.8;query282- 384;description=Metalloenzyme; phosphopentomutase 4845676..4846899 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759529 YP_005235503.1 CDS STMMW_45121 NC_016854.1 4847109 4847828 D pfam_scan;Pfam:PF01048; E()=7.0E-42;score=142.8;query 16-220;description=PNP_UDP_1; purine nucleoside phosphorylase 4847109..4847828 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759530 YP_005235504.1 CDS STMMW_45131 NC_016854.1 4847866 4848438 R Signal peptide; signalp; query 1-27;cleavage_site_probability=0.999; 1.000; putative outer membrane protein complement(4847866..4848438) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759531 YP_005235505.1 CDS STMMW_45141 NC_016854.1 4848435 4850843 R pfam_scan;Pfam:PF00577; E()=1.1E-119;score=399.9;query 31-784;description=Usher; putative fimbrial usher protein complement(4848435..4850843) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759532 YP_005235506.1 CDS STMMW_45161 NC_016854.1 4850857 4851564 R pfam_scan;Pfam:PF00345; E()=5.5E-21;score=74.5;query29- 143;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=2.6E-11;score=43.1;query148- 227;description=Pili_assembly_C; fimbrial assembly chaperone complement(4850857..4851564) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759533 YP_005235507.1 CDS STMMW_45171 NC_016854.1 4851642 4852331 R pfam_scan;Pfam:PF06551; E()=5.0E-51;score=171.9;query 1-135;description=DUF1120; putative outer membrane protein complement(4851642..4852331) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759534 YP_005235508.1 CDS STMMW_45181 NC_016854.1 4852379 4853068 R pfam_scan;Pfam:PF06551; E()=2.6E-49;score=166.3;query 1-131;description=DUF1120; putative outer membrane protein complement(4852379..4853068) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759535 YP_005235509.1 CDS STMMW_45191 NC_016854.1 4853381 4854397 R pfam_scan;Pfam:PF10437; E()=4.6E-21;score=74.1;query248- 333;description=Lip_prot_lig_C; pfam_scan;Pfam:PF03099; E()=2.7E-24;score=85.0;query46- 158;description=BPL_LplA_LipB; lipoate-protein ligase A complement(4853381..4854397) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759536 YP_005235510.1 CDS STMMW_45201 NC_016854.1 4854431 4855075 R pfam_scan;Pfam:PF10144; E()=2.9E-100;score=333.5;query 1-209;description=SMP_2; tmhmm; query 1-215; hypothetical protein complement(4854431..4855075) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759537 YP_005235511.1 CDS STMMW_45211 NC_016854.1 4855192 4856160 D pfam_scan;Pfam:PF00702; E()=1.0E-21;score=77.6;query113-291;description=Hydrolase; putative phosphoserine phosphatase 4855192..4856160 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759538 YP_005235512.1 CDS STMMW_45221 NC_016854.1 4856244 4857626 D pfam_scan;Pfam:PF05362; E()=8.3E-7;score=28.4;query 355-434;description=Lon_C; pfam_scan;Pfam:PF06745; E()=2.7E-11;score=42.9;query78-149;description=KaiC; putative DNA repair protein 4856244..4857626 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759539 YP_005235513.1 CDS STMMW_45231 NC_016854.1 4857750 4859009 D pfam_scan;Pfam:PF01381; E()=3.2E-9;score=36.0;query 16-68;description=HTH_3; transcriptional regulator 4857750..4859009 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759540 YP_005235514.1 CDS STMMW_45241 NC_016854.1 4859127 4860794 R pfam_scan;Pfam:PF00005; E()=1.4E-40;score=139.1;query 32-220;description=ABC_tran; ABC transporter complement(4859127..4860794) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759541 YP_005235515.1 CDS STMMW_45251 NC_016854.1 4860967 4862940 D pfam_scan;Pfam:PF01464; E()=2.9E-34;score=116.7;query 495-608;description=SLT; lytic murein transglycosylase 4860967..4862940 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759542 YP_005235516.1 CDS STMMW_45261 NC_016854.1 4862998 4863324 D pfam_scan;Pfam:PF01371; E()=2.3E-29;score=100.3;query 17-102;description=Trp_repressor; trp operon repressor 4862998..4863324 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759543 YP_005235517.1 CDS STMMW_45271 NC_016854.1 4863426 4863941 R pfam_scan;Pfam:PF01931; E()=1.6E-64;score=216.3;query 7-168;description=DUF84; hypothetical protein complement(4863426..4863941) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759544 YP_005235518.1 CDS STMMW_45281 NC_016854.1 4863990 4864637 D pfam_scan;Pfam:PF00300; E()=3.1E-43;score=147.2;query 3-157;description=PGAM; tmhmm; query 1-216; phosphoglycerate mutase 2 4863990..4864637 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759545 YP_005235519.1 CDS STMMW_45291 NC_016854.1 4864634 4865503 R pfam_scan;Pfam:PF06445; E()=3.8E-11;score=42.6;query130- 287;description=AraC_E_bind; pfam_scan;Pfam:PF00165; E()=8.7E-10;score=38.0;query69-105;description=HTH_AraC; right origin-binding protein complement(4864634..4865503) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759546 YP_005235520.1 CDS STMMW_45301 NC_016854.1 4865715 4866188 D pfam_scan;Pfam:PF05981; E()=4.8E-59;score=197.3;query 24-156;description=CreA; hypothetical protein 4865715..4866188 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759547 YP_005235521.1 CDS STMMW_45311 NC_016854.1 4866201 4866890 D pfam_scan;Pfam:PF00486; E()=6.7E-22;score=76.3;query150- 226;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=3.8E-28;score=97.4;query6- 116;description=Response_reg; putative two-component response regulator 4866201..4866890 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759548 YP_005235522.1 CDS STMMW_45321 NC_016854.1 4866890 4868314 D pfam_scan;Pfam:PF02518; E()=5.3E-25;score=86.9;query364-470;description=HATPase_c; pfam_scan;Pfam:PF00512; E()=3.0E-13;score=49.1;query257-319;description=HisKA; tmhmm; query 1-475; putative two-component sensor kinase 4866890..4868314 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759549 YP_005235523.1 CDS STMMW_45331 NC_016854.1 4868372 4869721 D pfam_scan;Pfam:PF06123; E()=8.0E-158;score=525.1;query 5-428;description=CreD; tmhmm; query 1-450; inner membrane protein 4868372..4869721 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759550 YP_005235524.1 CDS STMMW_45341 NC_016854.1 4869779 4870864 R pfam_scan;Pfam:PF00419; E()=2.3E-10;score=40.9;query205-361;description=Fimbrial; putative fimbrial subunit complement(4869779..4870864) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759551 YP_005235525.1 CDS STMMW_45351 NC_016854.1 4870905 4871462 R pfam_scan;Pfam:PF00419; E()=1.5E-17;score=64.1;query37-185;description=Fimbrial; tmhmm; query 1-186; putative fimbrial subunit complement(4870905..4871462) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759552 YP_005235526.1 CDS STMMW_45361 NC_016854.1 4871480 4874017 R pfam_scan;Pfam:PF00577; E()=6.7E-271;score=900.0;query 31-827;description=Usher; outer membrane fimbrial usher protein complement(4871480..4874017) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759553 YP_005235527.1 CDS STMMW_45371 NC_016854.1 4874063 4874746 R pfam_scan;Pfam:PF00345; E()=1.7E-39;score=134.3;query 21-139;description=Pili_assembly_N; pfam_scan;Pfam:PF02753; E()=7.3E-22;score=76.8;query148- 219;description=Pili_assembly_C; putative fimbrial chaperone protein complement(4874063..4874746) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759554 YP_005235528.1 CDS STMMW_45381 NC_016854.1 4874817 4875362 R pfam_scan;Pfam:PF00419; E()=1.8E-25;score=89.9;query25-181;description=Fimbrial; putative fimbrial protein complement(4874817..4875362) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759555 YP_005235529.1 CDS STMMW_45391 NC_016854.1 4875701 4876372 R transcriptional regulator complement(4875701..4876372) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759556 YP_005235530.1 CDS STMMW_45411 NC_016854.1 4877338 4878054 R pfam_scan;Pfam:PF00486; E()=2.9E-18;score=64.7;query156- 232;description=Trans_reg_C; pfam_scan;Pfam:PF00072; E()=4.7E-28;score=97.1;query6- 113;description=Response_reg; global response regulator complement(4877338..4878054) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759558 YP_005235531.1 CDS STMMW_45421 NC_016854.1 4878150 4878290 D hypothetical protein 4878150..4878290 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759559 YP_005235532.1 CDS STMMW_45431 NC_016854.1 4878690 4879376 D pfam_scan;Pfam:PF00588; E()=3.9E-27;score=94.4;query3- 153;description=SpoU_methylase; putative RNA methyltransferase 4878690..4879376 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759560 STMMW_t12 tRNA STMMW_t12 NC_016854.1 290777 290850 D tRNA-Ile 290777..290850 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759102 STMMW_t13 tRNA STMMW_t13 NC_016854.1 290963 291035 D tRNA-Ala 290963..291035 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759103 STMMW_t01 tRNA STMMW_t01 NC_016854.1 294815 294888 D tRNA-Asp 294815..294888 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759106 568708000004 tRNA 568708000004 NC_016854.1 304254 304327 D tRNA-Asp 304254..304327 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000005 tRNA 568708000005 NC_016854.1 368767 368839 D tRNA-Thr 368767..368839 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000006 tRNA 568708000006 NC_016854.1 386602 386673 D tRNA-Asn 386602..386673 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000007 tRNA 568708000007 NC_016854.1 386682 386754 D tRNA-Thr 386682..386754 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000008 tRNA 568708000008 NC_016854.1 652368 652441 D tRNA-Arg 652368..652441 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000009 tRNA 568708000009 NC_016854.1 776822 776893 R tRNA-Gln complement(776822..776893) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000010 tRNA 568708000010 NC_016854.1 776940 777011 R tRNA-Gln complement(776940..777011) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000011 tRNA 568708000011 NC_016854.1 777061 777134 R tRNA-Met complement(777061..777134) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000012 tRNA 568708000012 NC_016854.1 777153 777224 R tRNA-Gln complement(777153..777224) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000013 tRNA 568708000013 NC_016854.1 777263 777334 R tRNA-Gln complement(777263..777334) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000014 tRNA 568708000014 NC_016854.1 777361 777442 R tRNA-Leu complement(777361..777442) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000015 tRNA 568708000015 NC_016854.1 777454 777527 R tRNA-Met complement(777454..777527) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000016 tRNA 568708000016 NC_016854.1 857587 857659 D tRNA-Lys 857587..857659 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000017 tRNA 568708000017 NC_016854.1 857794 857866 D tRNA-Val 857794..857866 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000018 tRNA 568708000018 NC_016854.1 857873 857945 D tRNA-Lys 857873..857945 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000019 tRNA 568708000019 NC_016854.1 857998 858070 D tRNA-Lys 857998..858070 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000020 tRNA 568708000020 NC_016854.1 858208 858280 D tRNA-Lys 858208..858280 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000021 tRNA 568708000021 NC_016854.1 1023354 1023438 R tRNA-Ser complement(1023354..1023438) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000022 tRNA 568708000022 NC_016854.1 1172012 1172096 D tRNA-Ser 1172012..1172096 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000023 tRNA 568708000023 NC_016854.1 1220529 1220613 R tRNA-Ser complement(1220529..1220613) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000024 tRNA 568708000024 NC_016854.1 1329725 1329798 D tRNA-Arg 1329725..1329798 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000025 tRNA 568708000025 NC_016854.1 1342163 1342236 D tRNA-Arg 1342163..1342236 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000026 tRNA 568708000026 NC_016854.1 1498162 1498235 R tRNA-Val complement(1498162..1498235) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000027 tRNA 568708000027 NC_016854.1 1498249 1498322 R tRNA-Val complement(1498249..1498322) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000028 tRNA 568708000028 NC_016854.1 1845084 1845165 D tRNA-Tyr 1845084..1845165 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000029 tRNA 568708000029 NC_016854.1 1845373 1845454 D tRNA-Tyr 1845373..1845454 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000030 tRNA 568708000030 NC_016854.1 2018875 2018958 R tRNA-Leu complement(2018875..2018958) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000031 tRNA 568708000031 NC_016854.1 2018973 2019043 R tRNA-Cys complement(2018973..2019043) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000032 tRNA 568708000032 NC_016854.1 2019099 2019171 R tRNA-Gly complement(2019099..2019171) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000033 tRNA 568708000033 NC_016854.1 2105831 2105917 R tRNA-Ser complement(2105831..2105917) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000034 tRNA 568708000034 NC_016854.1 2106904 2106976 D tRNA-Asn 2106904..2106976 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000035 tRNA 568708000035 NC_016854.1 2107874 2107946 D tRNA-Asn 2107874..2107946 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000036 tRNA 568708000036 NC_016854.1 2117819 2117891 R tRNA-Asn complement(2117819..2117891) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000037 tRNA 568708000037 NC_016854.1 2119649 2119721 D tRNA-Asn 2119649..2119721 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000038 tRNA 568708000038 NC_016854.1 2354410 2354483 D tRNA-Pro 2354410..2354483 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000039 tRNA 568708000039 NC_016854.1 2529490 2529561 D tRNA-Arg 2529490..2529561 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000040 tRNA 568708000040 NC_016854.1 2552607 2552679 R tRNA-Ala complement(2552607..2552679) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000041 tRNA 568708000041 NC_016854.1 2552725 2552797 R tRNA-Ala complement(2552725..2552797) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000042 tRNA 568708000042 NC_016854.1 2555503 2555575 D tRNA-Val 2555503..2555575 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000043 tRNA 568708000043 NC_016854.1 2555624 2555696 D tRNA-Val 2555624..2555696 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000044 tRNA 568708000044 NC_016854.1 2555741 2555813 D tRNA-Val 2555741..2555813 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000045 tRNA 568708000045 NC_016854.1 2555821 2555893 D tRNA-Lys 2555821..2555893 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000046 tRNA 568708000046 NC_016854.1 2786007 2786080 R tRNA-Arg complement(2786007..2786080) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_t02 tRNA STMMW_t02 NC_016854.1 2826617 2826689 R tRNA-Glu complement(2826617..2826689) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761702 568708000048 tRNA 568708000048 NC_016854.1 2962915 2962988 R tRNA-Arg complement(2962915..2962988) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000049 tRNA 568708000049 NC_016854.1 2963185 2963258 R tRNA-Arg complement(2963185..2963258) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000050 tRNA 568708000050 NC_016854.1 2963324 2963397 R tRNA-Arg complement(2963324..2963397) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000051 tRNA 568708000051 NC_016854.1 2963463 2963536 R tRNA-Arg complement(2963463..2963536) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000052 tRNA 568708000052 NC_016854.1 2963543 2963632 R tRNA-Ser complement(2963543..2963632) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000053 tRNA 568708000053 NC_016854.1 3133074 3133147 D tRNA-Met 3133074..3133147 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000054 tRNA 568708000054 NC_016854.1 3133180 3133253 D tRNA-Met 3133180..3133253 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000055 tRNA 568708000055 NC_016854.1 3188684 3188754 R tRNA-Gly complement(3188684..3188754) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000056 tRNA 568708000056 NC_016854.1 3267387 3267459 D tRNA-Phe 3267387..3267459 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000057 tRNA 568708000057 NC_016854.1 3370248 3370320 D tRNA-Met 3370248..3370320 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000058 tRNA 568708000058 NC_016854.1 3480930 3481003 R tRNA-Met complement(3480930..3481003) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000059 tRNA 568708000059 NC_016854.1 3484179 3484262 R tRNA-Leu complement(3484179..3484262) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000060 tRNA 568708000060 NC_016854.1 3589924 3589996 R tRNA-Thr complement(3589924..3589996) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_t03 tRNA STMMW_t03 NC_016854.1 3593406 3593478 R tRNA-Glu complement(3593406..3593478) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762417 568708000062 tRNA 568708000062 NC_016854.1 3705728 3705841 R tRNA-Val complement(3705728..3705841) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000063 tRNA 568708000063 NC_016854.1 3843299 3843372 R tRNA-Pro complement(3843299..3843372) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000064 tRNA 568708000064 NC_016854.1 3971453 3971543 D tRNA-Sec 3971453..3971543 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_t04 tRNA STMMW_t04 NC_016854.1 4124635 4124707 D tRNA-Glu 4124635..4124707 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762899 STMMW_t05 tRNA STMMW_t05 NC_016854.1 4128157 4128230 D tRNA-Asp 4128157..4128230 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762902 STMMW_t06 tRNA STMMW_t06 NC_016854.1 4128242 4128314 D tRNA-Trp 4128242..4128314 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762903 568708000068 tRNA 568708000068 NC_016854.1 4163782 4163855 D tRNA-Arg 4163782..4163855 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000069 tRNA 568708000069 NC_016854.1 4163913 4163985 D tRNA-His 4163913..4163985 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000070 tRNA 568708000070 NC_016854.1 4164009 4164092 D tRNA-Leu 4164009..4164092 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000071 tRNA 568708000071 NC_016854.1 4164138 4164211 D tRNA-Pro 4164138..4164211 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_t07 tRNA STMMW_t07 NC_016854.1 4220544 4220617 D tRNA-Ile 4220544..4220617 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762987 STMMW_t08 tRNA STMMW_t08 NC_016854.1 4220732 4220804 D tRNA-Ala 4220732..4220804 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762988 STMMW_t09 tRNA STMMW_t09 NC_016854.1 4375496 4375569 D tRNA-Ile 4375496..4375569 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763128 STMMW_t10 tRNA STMMW_t10 NC_016854.1 4375684 4375756 D tRNA-Ala 4375684..4375756 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763129 568708000076 tRNA 568708000076 NC_016854.1 4382797 4382869 D tRNA-Thr 4382797..4382869 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000077 tRNA 568708000077 NC_016854.1 4382881 4382962 D tRNA-Tyr 4382881..4382962 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000078 tRNA 568708000078 NC_016854.1 4383082 4383153 D tRNA-Gly 4383082..4383153 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000079 tRNA 568708000079 NC_016854.1 4383163 4383235 D tRNA-Thr 4383163..4383235 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_t11 tRNA STMMW_t11 NC_016854.1 4419053 4419125 D tRNA-Glu 4419053..4419125 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763165 568708000081 tRNA 568708000081 NC_016854.1 4588570 4588642 R tRNA-Phe complement(4588570..4588642) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000082 tRNA 568708000082 NC_016854.1 4618407 4618479 D tRNA-Gly 4618407..4618479 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000083 tRNA 568708000083 NC_016854.1 4618639 4618711 D tRNA-Gly 4618639..4618711 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000084 tRNA 568708000084 NC_016854.1 4618871 4618943 D tRNA-Gly 4618871..4618943 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000085 tRNA 568708000085 NC_016854.1 4753001 4753082 D tRNA-Leu 4753001..4753082 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000086 tRNA 568708000086 NC_016854.1 4832610 4832693 R tRNA-Leu complement(4832610..4832693) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000087 tRNA 568708000087 NC_016854.1 4832728 4832811 R tRNA-Leu complement(4832728..4832811) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 568708000088 tRNA 568708000088 NC_016854.1 4832842 4832925 R tRNA-Leu complement(4832842..4832925) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 STMMW_r22 rRNA rrsH NC_016854.1 289176 290719 D 16S ribosomal RNA 289176..290719 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759101 STMMW_r01 rRNA rrlH NC_016854.1 291231 294323 D 23S ribosomal RNA 291231..294323 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759104 STMMW_r02 rRNA rrfH NC_016854.1 294506 294627 D 5S ribosomal RNA 294506..294627 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11759105 STMMW_r03 rRNA rrfG NC_016854.1 2823096 2823217 R 5S ribosomal RNA complement(2823096..2823217) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761700 STMMW_r04 rRNA rrlG NC_016854.1 2823401 2826420 R 23S ribosomal RNA complement(2823401..2826420) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761701 STMMW_r05 rRNA rrsG NC_016854.1 2826774 2828316 R 16S ribosomal RNA complement(2826774..2828316) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11761703 STMMW_r06 rRNA rrfF NC_016854.1 3589761 3589882 R 5S ribosomal RNA complement(3589761..3589882) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762414 STMMW_r07 rRNA rrfD NC_016854.1 3590006 3590127 R rRNA complement(3590006..3590127) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762415 STMMW_r08 rRNA rrlD NC_016854.1 3590217 3593208 R 23S ribosomal RNA complement(3590217..3593208) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762416 STMMW_r09 rRNA rrsD NC_016854.1 3593561 3595104 R 16S ribosomal RNA complement(3593561..3595104) Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762418 STMMW_r10 rRNA rrsC NC_016854.1 4123008 4124551 D 16S ribosomal RNA 4123008..4124551 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762898 STMMW_r11 rRNA rrlC NC_016854.1 4124904 4127895 D 23S ribosomal RNA 4124904..4127895 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762900 STMMW_r12 rRNA rrfC NC_016854.1 4127985 4128104 D 5S ribosomal RNA 4127985..4128104 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762901 STMMW_r13 rRNA rrsA NC_016854.1 4218933 4220474 D 16S ribosomal RNA 4218933..4220474 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762986 STMMW_r14 rRNA rrlA NC_016854.1 4220988 4223980 D 23S ribosomal RNA 4220988..4223980 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762989 STMMW_r15 rRNA rrfA NC_016854.1 4224069 4224190 D 5S ribosomal RNA 4224069..4224190 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11762990 STMMW_r16 rRNA rrsB NC_016854.1 4373885 4375428 D 16S ribosomal RNA 4373885..4375428 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763127 STMMW_r17 rRNA rrlB NC_016854.1 4375940 4378931 D 23S ribosomal RNA 4375940..4378931 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763130 STMMW_r18 rRNA rrfB NC_016854.1 4379124 4379245 D 5S ribosomal RNA 4379124..4379245 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763131 STMMW_r19 rRNA rrsE NC_016854.1 4417426 4418969 D 16S ribosomal RNA 4417426..4418969 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763164 STMMW_r20 rRNA rrlE NC_016854.1 4419322 4422313 D 23S ribosomal RNA 4419322..4422313 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763166 STMMW_r21 rRNA STMMW_r21 NC_016854.1 4422506 4422627 D 5S ribosomal RNA 4422506..4422627 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 11763167