-- dump date 20120504_161335 -- class Genbank::CDS -- table cds_note -- id note YP_003306820.1 KEGG: glo:Glov_0001 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: replication initiation factor DnaA; ATPase AAA YP_003306821.1 PFAM: RNA-binding S4 domain protein; KEGG: ppd:Ppro_0618 RNA-binding S4 domain- containing protein YP_003306822.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: geo:Geob_0003 DNA replication and repair protein RecF YP_003306823.1 PFAM: protein of unknown function DUF721; KEGG: geo:Geob_1482 protein of unknown function DUF721 YP_003306825.1 KEGG: dvl:Dvul_0005 DNA gyrase subunit beta; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_003306826.1 KEGG: glo:Glov_0004 DNA gyrase subunit beta; TIGRFAM: DNA gyrase subunit beta; PFAM: DNA topoisomerase type IIsubunit alpha B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003306827.1 KEGG: pca:Pcar_0005 DNA gyrase subunit alpha; TIGRFAM: DNA gyrase subunit alpha; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003306830.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: geo:Geob_2907 phosphodiesterase, MJ0936 family YP_003306831.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: scl:sce4004 DeoR family transcriptional regulator YP_003306832.1 PFAM: Autotransporter beta- domain protein; KEGG: elf:LF82_p222 EntS EntS/YbdA MFS transporter YP_003306833.1 KEGG: hypothetical protein YP_003306835.1 PFAM: metallophosphoesterase; KEGG: dno:DNO_0925 phosphoesterase domain- containing protein YP_003306836.1 KEGG: cjd:JJD26997_1065 carboxypeptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003306837.1 PFAM: AbgT transporter; C4-dicarboxylate anaerobic carrier; short chain fatty acid transporter; KEGG: ilo:IL1666 p-aminobenzoyl-glutamate transporter YP_003306838.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gme:Gmet_2360 lysyl-tRNA synthetase, class-2 YP_003306839.1 KEGG: bcc:BCc_201 YoaE YP_003306840.1 KEGG: hypothetical protein YP_003306841.1 PFAM: protein of unknown function DUF163; KEGG: dps:DP2216 hypothetical protein YP_003306842.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; KEGG: dal:Dalk_4491 DNA mismatch repair protein MutL YP_003306843.1 PFAM: thymidylate kinase; KEGG: thymidylate kinase-like protein; K00943 dTMP kinase YP_003306844.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat- containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: TPR Domain containing protein YP_003306845.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; biotin/lipoyl attachment domain-containing protein; KEGG: pla:Plav_3138 dihydrolipoamide dehydrogenase YP_003306846.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: dat:HRM2_47640 PdhC YP_003306847.1 PFAM: transketolase; transketolase domain protein; KEGG: dat:HRM2_47610 PdhB YP_003306848.1 PFAM: dehydrogenase E1 component; KEGG: oan:Oant_4117 pyruvate dehydrogenase (acetyl- transferring) YP_003306850.1 KEGG: hsm:HSM_1033 phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003306851.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ecl:EcolC_1649 short-chain dehydrogenase/reductase SDR YP_003306852.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: sea:SeAg_B4009 IIB component of PTS system YP_003306853.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: eum:ECUMN_3966 phosphotransferase system permease IIC YP_003306854.1 PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase YP_003306855.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: oan:Oant_4119 PTS system galactitol-specific IIC component YP_003306856.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003306857.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix type 11 domain protein; KEGG: asu:Asuc_0583 transcriptional antiterminator, BglG YP_003306858.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hsm:HSM_1036 DeoR family transcriptional regulator YP_003306859.1 PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase YP_003306860.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pol:Bpro_1286 alcohol dehydrogenase GroES- like YP_003306863.1 PFAM: endoribonuclease L-PSP; KEGG: vvu:VV1_2490 translation initiation inhibitor YP_003306865.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abu:Abu_1136 hypothetical protein YP_003306866.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein YP_003306868.1 PFAM: hypothetical protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: TPR Domain containing protein YP_003306869.1 KEGG: hypothetical protein ; K00099 1-deoxy-D- xylulose-5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003306870.1 PFAM: phosphatidate cytidylyltransferase; KEGG: pca:Pcar_1916 phosphatidate cytidylyltransferase YP_003306871.1 KEGG: nma:NMA0081 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003306872.1 PFAM: Domain of unknown function DUF1904; KEGG: bba:Bd0885 hypothetical protein YP_003306873.1 PFAM: conserved hypothetical protein; KEGG: rme:Rmet_3872 conserved hypothetical protein 698 YP_003306874.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tgr:Tgr7_0820 LysR family transcriptional regulator YP_003306881.1 KEGG: viral A-type inclusion protein YP_003306883.1 KEGG: conserved hypothetical protein YP_003306890.1 KEGG: pag:PLES_08281 hypothetical protein YP_003306892.1 KEGG: eca:ECA1475 hypothetical protein YP_003306893.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: dde:Dde_1128 ribosome recycling factor YP_003306894.1 KEGG: pca:Pcar_1919 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003306895.1 TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: nis:NIS_1536 translation elongation factor Ts YP_003306896.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: pca:Pcar_1921 30S ribosomal protein S2 YP_003306897.1 KEGG: prw:PsycPRwf_1518 hypothetical protein YP_003306898.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD- dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: glo:Glov_2392 NAD/NADP octopine/nopaline dehydrogenase YP_003306899.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: ppd:Ppro_1972 signal transduction histidine kinase YP_003306900.1 PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: ppd:Ppro_3459 response regulator receiver/ANTAR domain-containing protein YP_003306901.1 KEGG: scl:sce4731 hypothetical protein YP_003306902.1 PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vha:VIBHAR_06300 methylphosphotriester-DNA alkyltransferase YP_003306903.1 PFAM: endoribonuclease L-PSP; KEGG: lhk:LHK_01898 endoribonuclease L-PSP YP_003306905.1 TIGRFAM: conserved hypothetical protein; KEGG: afw:Anae109_3061 hypothetical protein YP_003306906.1 PFAM: DEAD/DEAH box helicase; transcription factor CarD; TRCF domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase; KEGG: dat:HRM2_28210 Mfd YP_003306907.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: wsu:WS1281 cell binding factor 2 precursor major antigen PEB4A YP_003306908.1 KEGG: Viral A-type inclusion protein repeat YP_003306909.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: abu:Abu_1278 S4 domain-containing protein YP_003306910.1 KEGG: hypothetical protein ; K00919 4- diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003306911.1 PFAM: SpoVG family protein; KEGG: bba:Bd2801 regulatory protein SpoVG YP_003306912.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: hypothetical protein YP_003306913.1 KEGG: nam:NAMH_1107 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003306914.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hpj:jhp1141 ABC transporter ATP- binding protein YP_003306915.1 KEGG: sil:SPO1999 hypothetical protein YP_003306918.1 KEGG: sat:SYN_01708 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003306919.1 TIGRFAM: threonine dehydratase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; amino acid-binding ACT domain protein; KEGG: ade:Adeh_3448 L-threonine ammonia-lyase YP_003306920.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: sfu:Sfum_3025 acetolactate synthase, small subunit YP_003306921.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: geo:Geob_1509 acetolactate synthase large subunit YP_003306922.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: dds:Ddes_1904 acetolactate synthase, small subunit YP_003306923.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: nis:NIS_1407 2-isopropylmalate synthase YP_003306924.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: geo:Geob_2938 2-isopropylmalate synthase/homocitrate synthase family protein YP_003306925.1 PFAM: metallophosphoesterase; KEGG: hch:HCH_01549 phosphohydrolase YP_003306926.1 TIGRFAM: homoaconitate hydratase family protein; 3- isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; KEGG: 3-isopropylmalate dehydratase ; K01703 3- isopropylmalate/(R)-2-methylmalate dehydratase large subunit YP_003306927.1 PFAM: Variant SH3 domain protein; SH3 domain protein; KEGG: hap:HAPS_2047 hypothetical protein YP_003306929.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: 3-isopropylmalate dehydratase small subunit ; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit YP_003306930.1 KEGG: dvm:DvMF_1794 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003306931.1 PFAM: aminotransferase class I and II; KEGG: dvm:DvMF_3003 GntR family transcriptional regulator YP_003306932.1 KEGG: gsu:GSU1909 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003306934.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003306935.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; rhodanese; SMART: Rhodanese domain protein; KEGG: pca:Pcar_0429 uncharacterized NAD(FAD)- dependent dehydrogenase YP_003306936.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: YbaK / prolyl-tRNA synthetases associated domain containing protein YP_003306937.1 PFAM: protein of unknown function DUF81; KEGG: cha:CHAB381_0722 inner membrane protein YfcA YP_003306938.1 PFAM: sulfatase; KEGG: similar to N-sulphoglucosamine sulphohydrolase precursor (Sulfoglucosamine sulfamidase) (Sulphamidase) ; K01565 N- sulfoglucosamine sulfohydrolase YP_003306939.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: asu:Asuc_0509 phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003306940.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: ppr:PBPRB0273 ascorbate-specific PTS system enzyme IIC/IIB YP_003306941.1 TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 L-ribulose-5-phosphate 4-epimerase YP_003306942.1 KEGG: hap:HAPS_1781 L-xylulose 5-phosphate 3-epimerase; TIGRFAM: hexulose-6-phosphate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_003306943.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: eum:ECUMN_4729 3-keto-L-gulonate 6-phosphate decarboxylase YP_003306944.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_04588 L-ascorbate-specific enzyme IIA component of PTS YP_003306945.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ecf:ECH74115_5711 ascorbate-specific phosphotransferase enzyme IIA component YP_003306946.1 PFAM: sulfatase; KEGG: seh:SeHA_C1020 sulfatase YP_003306947.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: seg:SG0865 phosphotransferase enzyme II, B component YP_003306948.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: sea:SeAg_B0921 ascorbate-specific PTS system enzyme IIC YP_003306949.1 KEGG: sec:SC4256 L-ascorbate 6-phosphate lactonase YP_003306950.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: asu:Asuc_0583 transcriptional antiterminator, BglG YP_003306951.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8 YP_003306952.1 PFAM: protein of unknown function DUF1706; KEGG: hhe:HH1054 hypothetical protein YP_003306955.1 KEGG: sea:SeAg_B2063 hypothetical protein YP_003306956.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_0035 Cof family hydrolase YP_003306957.1 KEGG: sec:SC4256 L-ascorbate 6-phosphate lactonase YP_003306958.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: vcj:VCD_000008 PTS system 3-keto-L-gulonate/L- ascorbate specific IIC component (SgaT) YP_003306959.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: kpe:KPK_5080 ascorbate-specific phosphotransferase enzyme IIB component YP_003306960.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_04588 L-ascorbate-specific enzyme IIA component of PTS YP_003306961.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: eum:ECUMN_4729 3-keto-L-gulonate 6-phosphate decarboxylase YP_003306962.1 KEGG: hap:HAPS_1781 L-xylulose 5-phosphate 3-epimerase; TIGRFAM: hexulose-6-phosphate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_003306963.1 TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: msu:MS0046 L-ribulose-5-phosphate 4-epimerase YP_003306964.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rlt:Rleg2_3945 transcriptional regulator, XRE family YP_003306965.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: abu:Abu_0978 HAD-superfamily phosphatase YP_003306966.1 TIGRFAM: degV family protein; PFAM: Dak phosphatase; DegV family protein; KEGG: dvm:DvMF_0600 DegV family protein YP_003306967.1 PFAM: CBS domain containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sat:SYN_00943 nitrogen regulatory IIA protein YP_003306968.1 PFAM: citrate transporter; Arsenical pump membrane protein; KEGG: dps:DP2070 hypothetical protein YP_003306969.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: fph:Fphi_0269 biotin-(acetyl-CoA-carboxylase) ligase YP_003306970.1 KEGG: fph:Fphi_0889 hypothetical protein YP_003306971.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: apa:APP7_0902 D,D-heptose 1,7-bisphosphate phosphatase YP_003306972.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: gme:Gmet_0408 UDP-N-acetylmuramoyl-tripeptide- -D-alanyl-D-alanine ligase YP_003306973.1 KEGG: fta:FTA_1703 phospho-N-acetylmuramoyl- pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide- transferase; PFAM: glycosyl transferase family 4 YP_003306974.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: geo:Geob_0778 UDP-N-acetylmuramoylalanine/D- glutamate ligase YP_003306975.1 PFAM: cell cycle protein; KEGG: gbm:Gbem_0490 cell division protein FtsW YP_003306976.1 KEGG: hypothetical protein ; K02563 UDP-N- acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyl transferase family 28; glycosyltransferase 28 domain YP_003306977.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pca:Pcar_2201 UDP-N-acetylmuramate--alanine ligase YP_003306978.1 KEGG: sat:SYN_01748 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003306979.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: fph:Fphi_0662 cell division protein FtsQ YP_003306980.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: sat:SYN_00437 cell division protein FtsZ YP_003306981.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: sun:SUN_0428 30S ribosomal protein S6 YP_003306982.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gsu:GSU3117 single-strand binding protein YP_003306983.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: ngk:NGK_1338 30S ribosomal protein S18 YP_003306985.1 TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; KEGG: hac:Hac_0304 hypothetical protein YP_003306986.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gme:Gmet_2988 cysteine synthase YP_003306987.1 KEGG: nam:NAMH_1592 YheB YP_003306988.1 KEGG: sat:SYN_02971 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: ATPase AAA central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003306989.1 PFAM: protein of unknown function DUF558; KEGG: dol:Dole_1732 hypothetical protein YP_003306990.1 KEGG: sat:SYN_00797 tRNA 2-methylthioadenosine synthase -like protein; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003306991.1 KEGG: hypothetical protein YP_003306992.1 PFAM: Iojap-related protein; KEGG: rcm:A1E_05185 iojap-related protein YP_003306994.1 KEGG: gsu:GSU2079 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_003306995.1 PFAM: beta-lactamase; RNA- metabolising metallo-beta-lactamase; KEGG: gme:Gmet_0366 hypothetical protein YP_003306996.1 PFAM: protein of unknown function UPF0044; KEGG: pin:Ping_0809 hypothetical protein YP_003306997.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: CGL83; hypothetical protein YP_003306998.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; transketolase; KEGG: pca:Pcar_1667 1-deoxy-D-xylulose-5-phosphate synthase YP_003306999.1 KEGG: gur:Gura_2037 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_003307000.1 KEGG: tdn:Suden_0492 peptidase S41A, C-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein YP_003307001.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: geo:Geob_1497 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_003307002.1 PFAM: GTP-binding protein HSR1-related; KEGG: sfr:Sfri_1486 ribosomal biogenesis GTPase YP_003307003.1 PFAM: protein of unknown function DUF368; KEGG: pcr:Pcryo_2147 hypothetical protein YP_003307004.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase P; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: sat:SYN_01009 calcium-transporting ATPase YP_003307005.1 TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118; KEGG: btr:Btr_1340 permease YP_003307006.1 KEGG: gsu:GSU2727 hypothetical protein YP_003307007.1 KEGG: sat:SYN_02959 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003307010.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: ara:Arad_15034 S-adenosylmethionine-dependent methyltransferase protein YP_003307012.1 PFAM: ATP synthase I YP_003307013.1 TIGRFAM: ATP synthase F0 subunit alpha; PFAM: H+transporting two-sector ATPase subunit alpha; KEGG: dol:Dole_0801 ATP synthase F0 subunit alpha YP_003307014.1 TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dal:Dalk_4311 ATP synthase F0 C subunit YP_003307015.1 TIGRFAM: ATP synthase F0 subunit beta; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: vsp:VS_3156 ATP synthase B chain YP_003307016.1 TIGRFAM: ATP synthase F1 subunit delta; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: dps:DP0831 F0F1 ATP synthase subunit delta YP_003307017.1 KEGG: gur:Gura_4261 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1 subunit alpha; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein YP_003307018.1 TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase subunit gamma; KEGG: glo:Glov_3171 F0F1 ATP synthase subunit gamma YP_003307019.1 KEGG: atp2; F1-ATPase beta (PMID 6228552) ; K02133 F-type H+-transporting ATPase beta; TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: ATPase AAA YP_003307020.1 TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/subunit epsilon; KEGG: lip:LI0404 F0F1 ATP synthase subunit epsilon YP_003307023.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: net:Neut_1073 6-aminohexanoate-dimer hydrolase YP_003307024.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_4404 major facilitator family transporter YP_003307025.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3358 endonuclease/exonuclease/phosphatase YP_003307026.1 KEGG: asu:Asuc_0608 acetyltransferase YP_003307027.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein YP_003307028.1 KEGG: shn:Shewana3_0416 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_003307029.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; M trans- acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003307030.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003307031.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: hso:HS_1143 galactitol-specific PTS system component IIB YP_003307032.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: sew:SeSA_A3992 PTS system, galactitol- specific IIC component YP_003307033.1 PFAM: aryldialkylphosphatase; KEGG: spe:Spro_4493 hydrolase YP_003307034.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: vvy:VVA1580 galactonate dehydratase protein YP_003307035.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: ppr:PBPRA1276 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase YP_003307036.1 KEGG: asu:Asuc_2100 hypothetical protein YP_003307037.1 PFAM: helix-turn-helix HxlR type; KEGG: hhe:HH1056 hypothetical protein YP_003307038.1 KEGG: xac:XAC2611 hypothetical protein YP_003307039.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: glo:Glov_2126 GTP-binding protein EngA YP_003307040.1 PFAM: protein of unknown function UPF0118; KEGG: msu:MS1958 PerM protein YP_003307041.1 PFAM: protein of unknown function UPF0118; KEGG: mmw:Mmwyl1_2087 hypothetical protein YP_003307042.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: cff:CFF8240_1561 transcriptional regulator YP_003307043.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: kpn:KPN_03804 dehydrogenase YP_003307044.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like YP_003307045.1 PFAM: phosphoglycerate kinase; KEGG: hypothetical protein ; K00927 phosphoglycerate kinase YP_003307046.1 KEGG: nmc:NMC2137 glyceraldehyde 3-phosphate dehydrogenase C; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003307047.1 PFAM: type II secretion system protein; KEGG: hdu:HD1125 pili/fimbriae biogenesis protein YP_003307048.1 KEGG: gme:Gmet_0059 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003307049.1 PFAM: major facilitator superfamily MFS_1; KEGG: pzu:PHZ_c2267 permease of the major facilitator superfamily YP_003307050.1 PFAM: ROK family protein; KEGG: sde:Sde_2639 fructokinase YP_003307051.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: atc:AGR_C_3190 ABC transporter (ATP-binding protein) YP_003307052.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: nam:NAMH_1710 bifunctional protein HldE YP_003307053.1 KEGG: pzu:PHZ_c2471 lysophospholipase L1 YP_003307054.1 PFAM: type II and III secretion system protein; KEGG: eta:ETA_07920 general secretion pathway protein D YP_003307055.1 KEGG: hypothetical protein YP_003307056.1 KEGG: hypothetical protein YP_003307059.1 KEGG: cation channel family protein YP_003307060.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: geo:Geob_3081 peptidase A24A domain protein YP_003307061.1 KEGG: ftn:FTN_0415 type IV pili, pilus assembly protein YP_003307062.1 TIGRFAM: ATP synthase F0 C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: dol:Dole_0802 ATP synthase F0 C subunit YP_003307063.1 KEGG: gur:Gura_3754 NAD synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; ExsB family protein YP_003307064.1 KEGG: pca:Pcar_0086 TrkH family potassium uptake protein; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_003307065.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: pca:Pcar_0085 K+ transporters, NAD- binding component YP_003307066.1 TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; KEGG: ppd:Ppro_3621 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA YP_003307067.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: hypothetical protein ; K03501 glucose inhibited division protein B YP_003307068.1 KEGG: gbm:Gbem_3956 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003307069.1 PFAM: protein of unknown function DUF490; KEGG: rsq:Rsph17025_2622 hypothetical protein YP_003307070.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: bba:Bd1493 hypothetical protein YP_003307071.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase LpxD; transferase; KEGG: pca:Pcar_1253 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_003307072.1 KEGG: ATP-dependent RNA helicase ; K01509 adenosinetriphosphatase YP_003307073.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pca:Pcar_2295 oxidoreductase YP_003307074.1 PFAM: Hsp33 protein; KEGG: gme:Gmet_0041 HSP33 protein YP_003307075.1 PFAM: sulfate transporter/antisigma-factor antagonist STAS; KEGG: sde:Sde_1113 hypothetical protein YP_003307076.1 KEGG: hypothetical protein; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; protein of unknown function DUF201; phosphoribosylglycinamide synthetase YP_003307077.1 PFAM: LuxS protein; KEGG: dps:DP0529 S-ribosylhomocysteinase YP_003307078.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: nam:NAMH_1201 deoxyribonuclease, TatD family YP_003307079.1 KEGG: mms:mma_0138 hypothetical protein YP_003307080.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: pub:SAR11_1055 holo-[acyl-carrier protein] synthase (holo-ACP synthase) YP_003307081.1 KEGG: bba:Bd0187 iron-regulated ABC transporter ATPase subunit SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: ATPase AAA YP_003307082.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: afw:Anae109_0903 cysteine desulfurase activator complex subunit SufB YP_003307083.1 PFAM: SufBD protein; KEGG: similar to ABC transporter subunit YP_003307084.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mxa:MXAN_1156 cysteine desulfurase SufS YP_003307085.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: lpc:LPC_2694 nitrogen fixation protein (Fe-S cluster formation) NifU YP_003307086.1 PFAM: Domain of unknown function DUF1877; KEGG: dal:Dalk_5077 domain of unknown function DUF1877 YP_003307087.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: ank:AnaeK_3118 glutamate dehydrogenase (NADP(+)) YP_003307088.1 PFAM: xylose isomerase; KEGG: sei:SPC_3669 hypothetical protein YP_003307089.1 KEGG: msu:MS0201 RbsB protein YP_003307090.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: atc:AGR_C_5112 ABC transporter protein, ATP binding component YP_003307091.1 PFAM: inner-membrane translocator; KEGG: msu:MS0199 AraH protein YP_003307092.1 PFAM: PfkB domain protein; KEGG: sei:SPC_3671 ribokinase YP_003307093.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: kpn:KPN_01704 DeoR transcriptional regulator YP_003307097.1 PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: ara:Arad_4755 hemolysin activator protein hec YP_003307099.1 TIGRFAM: adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: nme:NMB1768 hemagglutinin/hemolysin-related protein YP_003307101.1 KEGG: abu:Abu_0943 hypothetical protein YP_003307103.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gur:Gura_1571 multi-sensor signal transduction histidine kinase YP_003307104.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dol:Dole_1930 two component transcriptional regulator YP_003307105.1 PFAM: PhoU family protein; KEGG: dat:HRM2_02440 PhoU2 YP_003307106.1 KEGG: dvm:DvMF_0881 phosphate ABC transporter ATPase subunit; TIGRFAM: phosphate ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003307107.1 TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; KEGG: erg:ERGA_CDS_05480 SfhB protein homolog (peudouridylate synthase) YP_003307108.1 PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0301 NADPH-dependent FMN reductase YP_003307109.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccv:CCV52592_2023 oxidoreductase YP_003307110.1 PFAM: protein of unknown function DUF336; KEGG: azc:AZC_3294 hypothetical protein YP_003307112.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: cak:Caul_1373 ribosome small subunit- dependent GTPase A YP_003307114.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: gsu:GSU1605 3-oxoacyl-(acyl-carrier-protein) synthase II YP_003307115.1 PFAM: regulatory protein TetR; KEGG: eum:ECUMN_3348 conserved hypothetical protein, transcriptional regulator YP_003307116.1 PFAM: penicillin-binding protein transpeptidase; KEGG: gur:Gura_3505 beta-lactamase YP_003307117.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: sfu:Sfum_3044 50S ribosomal protein L19 YP_003307118.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: rbo:A1I_01370 signal peptidase I YP_003307119.1 PFAM: GCN5-related N-acetyltransferase; KEGG: abb:ABBFA_002742 ribosomal-protein-alanine acetyltransferase YP_003307120.1 KEGG: conserved hypothetical protein YP_003307121.1 PFAM: Domain of unknown function DUF1957; glycoside hydrolase family 57; KEGG: ank:AnaeK_1135 domain of unknown function DUF1957 YP_003307122.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aci:ACIAD1223 hypothetical protein YP_003307123.1 KEGG: alpha/beta fold family hydrolase YP_003307124.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_1529 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003307125.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pca:Pcar_3004 repressor of mar (multiple antibiotic resistance) operon YP_003307126.1 PFAM: phosphoglycerate mutase; KEGG: apj:APJL_0235 phosphoglycerate mutase YP_003307128.1 PFAM: protein of unknown function DUF1275; KEGG: mfa:Mfla_0180 hypothetical protein YP_003307132.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003307133.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bxe:Bxe_B2196 lipase YP_003307134.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bcm:Bcenmc03_5354 outer membrane autotransporter YP_003307135.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: sat:SYN_02264 UDP-sugar diphosphatase / 5'- nucleotidase YP_003307136.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: lhk:LHK_03101 GlpR1 YP_003307137.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: dat:HRM2_43150 5-nitroimidazole antibiotic resistance protein YP_003307138.1 PFAM: transposase IS200-family protein; KEGG: plu:plu4617 IS200 family transposase YP_003307139.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: ppr:PBPRB1791 hypothetical protein YP_003307140.1 PFAM: transcription factor CarD; KEGG: pub:SAR11_0423 hypothetical protein YP_003307141.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307142.1 PFAM: regulatory protein TetR; KEGG: nam:NAMH_0571 TetR family transcriptional regulator YP_003307146.1 KEGG: bcm:Bcenmc03_6355 outer membrane autotransporter YP_003307147.1 PFAM: regulatory protein TetR; KEGG: vvy:VV3093 transcriptional regulator YP_003307148.1 KEGG: rme:Rmet_5016 hypothetical protein YP_003307151.1 KEGG: hypothetical protein YP_003307152.1 PFAM: hypothetical protein; TPR repeat-containing protein; Sel1 domain protein repeat- containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: geo:Geob_0947 Sel1 domain protein repeat- containing protein YP_003307153.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: hip:CGSHiEE_05405 Sel1 domain-containing protein YP_003307155.1 PFAM: hypothetical protein; TPR repeat-containing protein; Sel1 domain protein repeat- containing protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: lpf:lpl2147 hypothetical protein YP_003307157.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: gur:Gura_0781 Sel1 domain-containing protein YP_003307159.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; hypothetical protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein YP_003307162.1 KEGG: conserved hypothetical protein YP_003307163.1 KEGG: conserved hypothetical protein YP_003307164.1 TIGRFAM: NAD pyrophosphatase/5'-nucleotidase NadN; PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: hiq:CGSHiGG_03645 NAD nucleotidase YP_003307165.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: apj:APJL_1779 2',3'-cyclic-nucleotide 2'- phosphodiesterase YP_003307166.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: hpy:HP0104 2',3'-cyclic-nucleotide 2'- phosphodiesterase (CpdB) YP_003307167.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical LOC583677 YP_003307168.1 PFAM: carboxylesterase type B; KEGG: hypothetical protein YP_003307169.1 KEGG: hch:HCH_01205 hypothetical protein YP_003307170.1 PFAM: phosphopentomutase domain protein; metalloenzyme domain protein; KEGG: cko:CKO_04800 mutase YP_003307171.1 PFAM: alanine racemase domain protein; KEGG: cko:CKO_04801 hypothetical protein YP_003307172.1 KEGG: plu:plu2000 hypothetical protein YP_003307173.1 KEGG: similar to hCG2031650 ; K01175 YP_003307174.1 KEGG: ecq:ECED1_4035 conserved hypothetical protein; inner membrane protein YP_003307175.1 KEGG: ssn:SSON_3509 hypothetical protein YP_003307176.1 PFAM: aryldialkylphosphatase; KEGG: yen:YE1042 hydrolase YP_003307177.1 PFAM: PRD domain protein; KEGG: ect:ECIAI39_3860 hypothetical protein YP_003307178.1 KEGG: ppr:PBPRA2775 hypothetical protein YP_003307179.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: haloacid dehalogenase-like family hydrolase ; K07024 YP_003307180.1 PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN0989 hypothetical protein YP_003307181.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein) YP_003307182.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: HD domain containing protein ; K06950 YP_003307183.1 PFAM: peptidase M48 Ste24p; KEGG: ppd:Ppro_3243 peptidase M48, Ste24p YP_003307184.1 PFAM: aminoglycoside phosphotransferase; KEGG: ret:RHE_CH02947 aminoglycoside 3'- phosphotransferase protein YP_003307185.1 PFAM: peptidase M48 Ste24p; KEGG: sat:SYN_02199 Zn-dependent protease with chaperone function YP_003307187.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: msl:Msil_1953 transcriptional regulator, XRE family YP_003307188.1 KEGG: lpp:lpp1435 hypothetical protein YP_003307189.1 KEGG: ASNS; asparagine synthetase; K01953 asparagine synthase (glutamine-hydrolysing); TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003307190.1 KEGG: pmu:PM1699 hypothetical protein YP_003307191.1 PFAM: radical SAM protein; KEGG: sfu:Sfum_2157 radical SAM protein YP_003307192.1 KEGG: dal:Dalk_3807 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003307193.1 PFAM: integrase family protein; KEGG: dds:Ddes_2240 integrase family protein YP_003307194.1 KEGG: hypothetical protein YP_003307195.1 KEGG: conserved hypothetical protein YP_003307196.1 PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: yps:YPTB2912 3',5'-cyclic-nucleotide phosphodiesterase YP_003307197.1 PFAM: protein of unknown function DUF62; KEGG: efe:EFER_3688 conserved hypothetical protein; exported protein YP_003307199.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: sat:SYN_01740 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase YP_003307200.1 KEGG: pca:Pcar_1944 2-dehydro-3- deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003307201.1 PFAM: aminotransferase class V; KEGG: dds:Ddes_0804 aminotransferase class V YP_003307203.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: pmr:PMI2319 prolipoprotein diacylglyceryl transferase YP_003307204.1 KEGG: hypothetical protein YP_003307205.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cps:CPS_3728 glyoxalase family protein YP_003307206.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein YP_003307207.1 PFAM: transposase IS3/IS911 family protein YP_003307208.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; KEGG: yen:YE2513 hydrolase YP_003307209.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: msu:MS2235 Cof protein YP_003307210.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_05430 short-chain alcohol dehydrogenase YP_003307211.1 PFAM: transposase IS3/IS911 family protein; KEGG: par:Psyc_1452 IS1329/IS3/IS911 transposase YP_003307212.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sml:Smlt3786 acetyltransferase YP_003307213.1 KEGG: scl:sce1139 hypothetical protein YP_003307214.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sat:SYN_00574 cAMP-dependent transcriptional regulator YP_003307215.1 KEGG: gur:Gura_3378 transcriptional modulator of MazE/toxin, MazF YP_003307216.1 KEGG: hypothetical protein YP_003307217.1 KEGG: conserved hypothetical protein YP_003307218.1 KEGG: hypothetical protein YP_003307219.1 KEGG: hypothetical protein YP_003307220.1 KEGG: gme:Gmet_0286 rhs element Vgr protein:GP5- like YP_003307221.1 KEGG: hypothetical protein YP_003307240.1 KEGG: hypothetical protein YP_003307242.1 KEGG: hypothetical protein YP_003307245.1 KEGG: GI24505 gene product from transcript GI24505- RA YP_003307246.1 KEGG: hypothetical protein YP_003307249.1 KEGG: hypothetical protein YP_003307250.1 SMART: Hedgehog/intein hint domain protein; KEGG: hch:HCH_02073 rhs family protein YP_003307251.1 KEGG: sde:Sde_3686 hypothetical protein YP_003307252.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bac:BamMC406_5979 hypothetical protein YP_003307254.1 KEGG: conserved hypothetical protein YP_003307255.1 KEGG: RING Zn finger-containing protein YP_003307256.1 KEGG: scl:sce7826 Rhs family carbohydrate-binding protein YP_003307260.1 PFAM: pentapeptide repeat protein; KEGG: ecm:EcSMS35_4879 pentapeptide repeat protein YP_003307261.1 KEGG: hypothetical protein YP_003307262.1 KEGG: swd:Swoo_2239 hypothetical protein YP_003307263.1 KEGG: hypothetical protein similar to DNA-binding chaperone; K09522 DnaJ homolog, subfamily C, member 2 YP_003307264.1 KEGG: RING Zn finger-containing protein YP_003307265.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003307266.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sml:Smlt3786 acetyltransferase YP_003307267.1 KEGG: scl:sce1139 hypothetical protein YP_003307268.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: sat:SYN_00574 cAMP-dependent transcriptional regulator YP_003307270.1 KEGG: hypothetical protein YP_003307271.1 KEGG: hypothetical protein YP_003307273.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; hypothetical protein; KEGG: gur:Gura_1985 Sel1 domain-containing protein YP_003307274.1 KEGG: hypothetical protein YP_003307278.1 PFAM: secretion protein HlyD; KEGG: shl:Shal_3506 secretion protein HlyD YP_003307279.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: rpi:Rpic_0753 4-oxalocrotonate tautomerase YP_003307280.1 PFAM: glycoside hydrolase family 4; KEGG: vsa:VSAL_II1024 6-phospho-beta- glucosidase YP_003307281.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA0858 beta-glucoside operon antiterminator YP_003307282.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0860 PTS system, IIABC component YP_003307283.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: swp:swp_3961 regulatory protein, LuxR:response regulator receiver YP_003307284.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307286.1 PFAM: TraX family protein; KEGG: rms:RMA_0932 F pilin acetylation protein TraX YP_003307287.1 PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: geo:Geob_1659 aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein YP_003307288.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: geo:Geob_1661 ABC transporter YP_003307289.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: geo:Geob_1660 binding-protein-dependent transport systems inner membrane component YP_003307290.1 PFAM: thioredoxin domain; KEGG: eca:ECA1555 hypothetical protein YP_003307291.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: wsu:WS1004 hypothetical protein YP_003307292.1 PFAM: ThiJ/PfpI domain protein; KEGG: hypothetical protein ; K03152 4-methyl- 5(b-hydroxyethyl)-thiazole monophosphate biosynthesis YP_003307293.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: cjj:CJJ81176_1547 MerR family transcriptional regulator YP_003307294.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rle:RL1343 short-chain dehydrogenase/reductase YP_003307297.1 PFAM: aldo/keto reductase; KEGG: rlt:Rleg2_2710 aldo/keto reductase YP_003307298.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: gur:Gura_3514 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003307299.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2314 drug resistance transporter EmrB/QacA subfamily YP_003307300.1 KEGG: GK14728 gene product from transcript GK14728- RA YP_003307301.1 KEGG: ara:Arad_7384 flavodoxin YP_003307303.1 PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: oan:Oant_4631 67 kDa myosin-cross-reactive antigen family protein YP_003307304.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; KEGG: gur:Gura_3720 acetolactate synthase, large subunit, biosynthetic type YP_003307305.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: pha:PSHAb0463 acetolactate synthase 3 regulatory subunit YP_003307306.1 PFAM: regulatory protein TetR; KEGG: gur:Gura_0986 TetR family transcriptional regulator YP_003307307.1 PFAM: alpha/beta hydrolase fold; KEGG: nmu:Nmul_A1582 alpha/beta hydrolase fold YP_003307310.1 KEGG: ype:YPO3960 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003307311.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vfm:VFMJ11_A0798 pts system, mannose-specific iiab component YP_003307312.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIsubunit beta; phosphotransferase system EIIC; KEGG: ppr:PBPRA1575 PTS system, fructose-specific IIBC component YP_003307316.1 KEGG: hypothetical protein YP_003307318.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307320.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003307322.1 KEGG: bra:BRADO3320 hypothetical protein YP_003307324.1 KEGG: oan:Oant_0945 hypothetical protein YP_003307325.1 PFAM: protein of unknown function DUF606; KEGG: sbp:Sbal223_1547 protein of unknown function DUF606 YP_003307326.1 PFAM: protein of unknown function DUF606; KEGG: plu:plu2183 hypothetical protein YP_003307327.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: nis:NIS_1798 Crp/FNR family transcriptional regulator YP_003307328.1 KEGG: hch:HCH_04257 hypothetical protein YP_003307329.1 KEGG: rle:RL4049 hypothetical protein YP_003307330.1 PFAM: OsmC family protein; KEGG: pat:Patl_4022 OsmC-like protein YP_003307331.1 KEGG: AGAP002877-PA YP_003307332.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sensory histidine protein kinase YP_003307333.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gme:Gmet_3383 two component transcriptional regulator YP_003307334.1 KEGG: hypothetical protein YP_003307335.1 KEGG: low complexity orf YP_003307336.1 KEGG: dps:DP0608 hypothetical protein YP_003307338.1 PFAM: regulatory protein LysR; KEGG: wsu:WS0837 hypothetical protein YP_003307339.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cha:CHAB381_1233 methionine import ATP- binding protein MetN YP_003307340.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cff:CFF8240_0968 D-methionine transporter permease MetI YP_003307341.1 PFAM: NLPA lipoprotein; KEGG: hhe:HH0714 hypothetical protein YP_003307342.1 PFAM: protein of unknown function DUF169; KEGG: dps:DP1175 hypothetical protein YP_003307343.1 KEGG: ccv:CCV52592_0403 hypothetical protein YP_003307344.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gbm:Gbem_2844 MerR family transcriptional regulator YP_003307348.1 PFAM: beta-lactamase; KEGG: metallo-beta-lactamase superfamily protein YP_003307349.1 PFAM: purine or other phosphorylase family 1; KEGG: sse:Ssed_2504 uridine phosphorylase YP_003307350.1 PFAM: chloride channel core; KEGG: rpi:Rpic_3981 chloride channel core YP_003307351.1 PFAM: nitroreductase; KEGG: ppd:Ppro_2354 nitroreductase YP_003307352.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: vsp:VS_II1369 Na+ driven multidrug efflux pump YP_003307353.1 PFAM: ROK family protein; KEGG: yen:YE2511 hypothetical protein YP_003307354.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; KEGG: vcm:VCM66_1319 phosphatase YP_003307358.1 PFAM: protein of unknown function DUF1311; KEGG: vpa:VP1847 hypothetical protein YP_003307359.1 TIGRFAM: sulfite reductase, subunit A; KEGG: aha:AHA_2575 anaerobic sulfite reductase subunit A YP_003307360.1 TIGRFAM: sulfite reductase, subunit B; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; KEGG: aha:AHA_2576 anaerobic sulfite reductase subunit B YP_003307361.1 TIGRFAM: sulfite reductase, subunit C; PFAM: nitrite and sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: ecy:ECSE_P3-0003 anaerobic sulfite reductase subunit C YP_003307365.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bch:Bcen2424_6767 outer membrane autotransporter YP_003307366.1 PFAM: regulatory protein TetR; KEGG: vha:VIBHAR_00128 TetR family transcriptional regulator YP_003307367.1 KEGG: pca:Pcar_2642 hypothetical protein YP_003307368.1 PFAM: helix-turn-helix HxlR type; KEGG: dvm:DvMF_2974 HxlR family transcriptional regulator YP_003307369.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: ppd:Ppro_0486 ammonium transporter YP_003307370.1 PFAM: nitrogen regulatory protein P-II; KEGG: wsu:WS0409 nitrogen regulatory protein P-II YP_003307371.1 PFAM: initiator RepB protein; KEGG: conserved hypothetical protein YP_003307372.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: esa:ESA_02758 hypothetical protein YP_003307373.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: vpa:VP1640 hypothetical protein YP_003307374.1 PFAM: ROK family protein; KEGG: yen:YE2511 hypothetical protein YP_003307375.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: tau:Tola_1783 PHP domain protein YP_003307376.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein YP_003307377.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: dps:DP1286 sodium/alanine symporter YP_003307378.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: apa:APP7_0823 hypothetical protein YP_003307379.1 KEGG: hypothetical protein ; K00964 galactose- 1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003307380.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; KEGG: afr:AFE_1342 UDP-glucose 4-epimerase YP_003307381.1 PFAM: aldose 1-epimerase; KEGG: cja:CJA_0807 aldose 1-epimerase YP_003307382.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: pin:Ping_2017 galactokinase YP_003307383.1 PFAM: ROK family protein; KEGG: vha:VIBHAR_02870 hypothetical protein YP_003307384.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cja:CJA_1779 MotA/TolQ/ExbB proton channel family domain protein YP_003307385.1 PFAM: biopolymertransporter ExbD/TolR; KEGG: slo:Shew_2475 biopolymer transporter ExbD/TolR YP_003307386.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cff:CFF8240_1760 TonB-dependent heme receptor YP_003307387.1 PFAM: transporter permease; ABC-3 protein; KEGG: ccv:CCV52592_0650 hemin transporter permease HmuU YP_003307388.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cff:CFF8240_1762 ferrichrome transport ATP- binding protein FhuC YP_003307389.1 PFAM: periplasmic binding protein; KEGG: ccv:CCV52592_0648 hemin-binding periplasmic protein HmuT YP_003307390.1 KEGG: GK23239 gene product from transcript GK23239- RA YP_003307391.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: cju:C8J_1514 hypothetical protein YP_003307392.1 KEGG: ccv:CCV52592_0647 quinone-reactive Ni/Fe hydrogenase, large subunit; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003307393.1 KEGG: cff:CFF8240_1764 flavodoxin family protein YP_003307395.1 PFAM: amidohydrolase; KEGG: dat:HRM2_28460 GuaD YP_003307396.1 KEGG: gur:Gura_1305 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4- type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; DNA-binding protein YP_003307398.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: dps:DP0120 D-tyrosyl-tRNA(Tyr) deacylase YP_003307399.1 PFAM: NLP/P60 protein; KEGG: eca:ECA2735 outer membrane lipoprotein YP_003307402.1 PFAM: NUDIX hydrolase; KEGG: avi:Avi_3612 MutT/NUDIX family protein YP_003307403.1 PFAM: nitroreductase; KEGG: dps:DP0082 NADH dehydrogenase/NAD(P)H nitroreductase YP_003307404.1 PFAM: aldo/keto reductase; KEGG: prostaglandin f synthase; K00120 YP_003307405.1 KEGG: nmn:NMCC_1509 phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase YP_003307406.1 KEGG: hypothetical protein YP_003307407.1 KEGG: pen:PSEEN4595 hypothetical protein YP_003307408.1 PFAM: protein of unknown function DUF328; KEGG: ftw:FTW_0267 hypothetical protein YP_003307409.1 KEGG: swd:Swoo_2851 hypothetical protein YP_003307410.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: pau:PA14_61480 uracil permease YP_003307411.1 PFAM: OstA family protein; KEGG: glo:Glov_1235 organic solvent tolerance protein YP_003307412.1 KEGG: gur:Gura_2628 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; anticodon-binding domain protein; threonyl/alanyl tRNA synthetase SAD YP_003307413.1 PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: glo:Glov_2315 PhoH family protein YP_003307415.1 KEGG: hypothetical protein YP_003307417.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dat:HRM2_28550 PpiB1 YP_003307418.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: xfm:Xfasm12_0873 50S ribosomal protein L31 YP_003307419.1 KEGG: wsu:WS1653 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003307420.1 TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: gme:Gmet_0922 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1- kinase YP_003307421.1 PFAM: protein of unknown function UPF0079; KEGG: sat:SYN_02780 ATP/GTP hydrolase YP_003307422.1 PFAM: peptidase M22 glycoprotease; KEGG: pca:Pcar_1913 metal-dependent protease YP_003307423.1 KEGG: plu:plu4104 cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_003307424.1 KEGG: abu:Abu_0493 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_003307425.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: hhe:HH1308 acetate kinase YP_003307426.1 KEGG: smd:Smed_3790 hypothetical protein YP_003307427.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: pca:Pcar_1846 NADP-reducing hydrogenase chain A YP_003307428.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pca:Pcar_1604 NADP-reducing hydrogenase chain C YP_003307429.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pca:Pcar_1605 NAD-reducing iron-only hydrogenase large subunit YP_003307430.1 PFAM: OmpA/MotB domain protein; KEGG: xac:XAC1012 outer membrane protein YP_003307433.1 KEGG: conserved hypothetical protein YP_003307437.1 KEGG: pca:Pcar_1636 NADP-reducing hydrogenase chain A YP_003307438.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein YP_003307439.1 PFAM: PP-loop domain protein; KEGG: gsu:GSU0127 hypothetical protein YP_003307440.1 PFAM: FeoA family protein YP_003307441.1 TIGRFAM: ferrous iron transporter B; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: nis:NIS_0095 ferrous iron transporter B YP_003307443.1 KEGG: gur:Gura_0122 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: nucleotidyl transferase; transferase YP_003307444.1 KEGG: gsu:GSU0661 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003307445.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: glo:Glov_1843 SUA5/YciO/YrdC/YwlC family protein YP_003307446.1 KEGG: hypothetical protein YP_003307447.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: noc:Noc_2895 type II secretion system protein E YP_003307448.1 KEGG: ilo:IL2596 phosphoserine phosphatase YP_003307450.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: cak:Caul_2954 molybdopterin oxidoreductase YP_003307451.1 PFAM: AzlC family protein; KEGG: sse:Ssed_2539 branched-chain amino acid transporter AzlC YP_003307452.1 PFAM: branched-chain amino acid transport YP_003307453.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rle:RL1750 PTS-dependent dihydroxyacetone kinase,ADP-binding subunit YP_003307454.1 PFAM: Dak kinase; KEGG: ypb:YPTS_0816 Dak kinase YP_003307455.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase; KEGG: asu:Asuc_1597 ribose 5-phosphate isomerase B YP_003307456.1 PFAM: xylose isomerase; KEGG: dac:Daci_0782 xylose isomerase domain- containing protein YP_003307457.1 PFAM: cupin; KEGG: rhi:NGR_c06260 hypothetical protein YP_003307458.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; hypothetical protein; M trans-acting positive regulator; KEGG: eta:ETA_29240 phosphotransferase system mannitol/fructose-specific IIA domain YP_003307459.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: similar to alcohol dehydrogenase YP_003307460.1 PFAM: ketose-bisphosphate aldolase class-II; KEGG: pmu:PM1373 hypothetical protein YP_003307461.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bau:BUAPTUC7_566 PTS system mannitol-specific IIABC component YP_003307462.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; phosphotransferase system EIIC; KEGG: vpa:VP0370 PTS system, mannitol-specific IIABC component YP_003307463.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: sek:SSPA3742 DeoR family regulatory protein YP_003307464.1 PFAM: protein of unknown function DUF1349; KEGG: vch:VCA0345 hypothetical protein YP_003307465.1 PFAM: protein of unknown function DUF307; KEGG: vsa:VSAL_I1374 hypothetical protein YP_003307466.1 KEGG: viral A-type inclusion protein YP_003307467.1 PFAM: SNF2-related protein; zinc finger SWIM domain protein; SNF2 helicase associated domain protein ; helicase; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: lip:LI0168 SNF2 family DNA/RNA helicase YP_003307468.1 KEGG: prw:PsycPRwf_1350 hypothetical protein YP_003307469.1 PFAM: beta-lactamase; KEGG: atc:AGR_C_2426 metal-dependent hydrolase YP_003307471.1 PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: spe:Spro_3928 IclR family transcriptional regulator YP_003307472.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_0935 2-deoxy-D-gluconate 3- dehydrogenase YP_003307473.1 PFAM: 5-keto 4-deoxyuronate isomerase; KEGG: pmr:PMI2133 4-deoxy-L-threo-5-hexosulose- uronate ketol-isomerase YP_003307474.1 KEGG: hypothetical protein YP_003307475.1 KEGG: kpe:KPK_A0130 PTS system, lactose/cellobiose family IIC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003307476.1 PFAM: protein of unknown function DUF871 YP_003307477.1 PFAM: PfkB domain protein; KEGG: hsm:HSM_0286 ribokinase-like domain- containing protein YP_003307478.1 PFAM: amidohydrolase; amidohydrolase; KEGG: vfi:VF_2507 dihydroorotase YP_003307479.1 TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: esa:ESA_00254 hypothetical protein YP_003307480.1 PFAM: protein of unknown function DUF1341; KEGG: cko:CKO_05127 hypothetical protein YP_003307483.1 KEGG: gur:Gura_2798 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; anticodon- binding domain protein YP_003307484.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bte:BTH_I2377 hypothetical protein YP_003307485.1 PFAM: sodium:dicarboxylate symporter; KEGG: aha:AHA_4076 sodium/dicarboxylate symporter family protein YP_003307486.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gbm:Gbem_3061 transcriptional regulator, BadM/Rrf2 family YP_003307487.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: gbm:Gbem_2178 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003307490.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: pat:Patl_4176 peptidase U61, LD- carboxypeptidase A YP_003307491.1 KEGG: conserved hypothetical protein YP_003307492.1 KEGG: ngk:NGK_1270 hypothetical protein YP_003307493.1 PFAM: nitroreductase; KEGG: cvi:CV_3500 oxygen-insensitive NADPH nitroreductase YP_003307494.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; KEGG: asu:Asuc_0154 altronate dehydratase YP_003307495.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein) YP_003307496.1 PFAM: glucuronate isomerase; KEGG: asu:Asuc_0145 glucuronate isomerase YP_003307497.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: geo:Geob_0562 GntR family transcriptional regulator YP_003307498.1 PFAM: glycoside hydrolase family 4; KEGG: pla:Plav_1937 glycoside hydrolase family protein YP_003307499.1 PFAM: glycosyl hydrolase family 88; KEGG: hypothetical protein YP_003307500.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein YP_003307501.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mmw:Mmwyl1_0774 binding-protein-dependent transport systems inner membrane component YP_003307502.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_3353 lactose transporter (permease) YP_003307503.1 PFAM: glycoside hydrolase family 28; KEGG: atc:AGR_L_3361 hypothetical protein YP_003307504.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE3707 altronate oxidoreductase YP_003307505.1 KEGG: ecc:c0325 hypothetical protein YP_003307506.1 KEGG: ecc:c0325 hypothetical protein YP_003307510.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: kpe:KPK_3276 magnesium-translocating P-type ATPase YP_003307512.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmy:Pmen_1241 GCN5-related N- acetyltransferase YP_003307513.1 KEGG: wsu:WS1407 hypothetical protein YP_003307514.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: gur:Gura_1099 5-formyltetrahydrofolate cyclo- ligase YP_003307516.1 PFAM: aminotransferase class V; KEGG: pha:PSHAa2671 cysteine desulfurase (tRNA sulfurtransferase; RNA 4-thiouridine sulfurtransferase), PLP-dependent YP_003307517.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: vfi:VF_A0348 DNA-binding transcriptional repressor EbgR YP_003307518.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: eum:ECUMN_3559 cryptic beta-D-galactosidase, subunit alpha YP_003307519.1 KEGG: sme:SM_b20968 hypothetical protein YP_003307520.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20969 sugar uptake ABC transporter permease YP_003307521.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sme:SM_b20970 sugar uptake ABC transporter permease YP_003307522.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SM_b20971 sugar uptake ABC transporter periplasmic solute-binding protein precursor YP_003307523.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_C_3999 hypothetical protein YP_003307524.1 PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003307525.1 KEGG: hypothetical protein ; K10750 chromatin assembly factor 1 subunit A YP_003307530.1 PFAM: OmpA/MotB domain protein; KEGG: smt:Smal_0800 OmpA/MotB domain protein YP_003307531.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 outer membrane autotransporter barrel domain protein YP_003307533.1 PFAM: regulatory protein TetR; KEGG: glo:Glov_3431 TetR family transcriptional regulator YP_003307534.1 TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: thiamine biosynthesis protein; THUMP domain protein; ExsB family protein; KEGG: cbd:CBUD_1272 thiamine biosynthesis protein YP_003307535.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pin:Ping_1819 ribonuclease BN YP_003307536.1 PFAM: protein of unknown function DUF195; KEGG: cps:CPS_3589 hypothetical protein YP_003307537.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: spq:SPAB_04088 hypothetical protein YP_003307538.1 KEGG: dvm:DvMF_0120 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein YP_003307539.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: ppd:Ppro_1731 leucyl-tRNA synthetase YP_003307540.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; ExsB family protein; KEGG: wpi:WPa_0800 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase YP_003307541.1 KEGG: Hypothetical protein CBG08632 YP_003307542.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: abm:ABSDF0852 ADP- ribosylglycohydrolase YP_003307543.1 PFAM: aminotransferase class IV; KEGG: dar:Daro_3294 branched-chain amino acid aminotransferase YP_003307544.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: pfl:PFL_3450 hypothetical protein YP_003307547.1 PFAM: peptidase M24; creatinase; KEGG: gsu:GSU2021 xaa-pro dipeptidase YP_003307548.1 PFAM: NUDIX hydrolase; KEGG: nma:NMA1263 hypothetical protein NMA1263 YP_003307549.1 PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307550.1 KEGG: hypothetical protein YP_003307551.1 PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transporter substrate-binding protein YP_003307552.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cvi:CV_2348 sugar ABC transporter ATP- binding protein YP_003307553.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003307554.1 PFAM: inner-membrane translocator; KEGG: sme:SM_b20125 sugar ABC transporter permease YP_003307555.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: esa:ESA_04361 DNA-binding transcriptional regulator FrlR YP_003307556.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: cko:CKO_02512 ribonucleoside hydrolase 1 YP_003307557.1 TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: ecm:EcSMS35_4208 uridine phosphorylase YP_003307558.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: elf:LF82_p222 EntS EntS/YbdA MFS transporter YP_003307559.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: nis:NIS_0762 2-nitropropane dioxygenase YP_003307560.1 KEGG: hypothetical protein YP_003307561.1 PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_7066 transcriptional regulator YP_003307562.1 TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: mxa:MXAN_1238 hypothetical protein YP_003307563.1 TIGRFAM: peptide chain release factor H; PFAM: class I peptide chain release factor; KEGG: sed:SeD_A0345 peptide chain release factor H YP_003307565.1 PFAM: von Willebrand factor A; KEGG: ccv:CCV52592_1750 von Willebrand factor A domain-containing protein YP_003307566.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: negative regulator of class I heat shock protein; KEGG: pca:Pcar_0109 heat-inducible transcription repressor HrcA YP_003307567.1 PFAM: GrpE protein; KEGG: dal:Dalk_3616 GrpE protein YP_003307568.1 TIGRFAM: chaperone protein DnaK; PFAM: heat shock protein 70; KEGG: geo:Geob_1107 chaperone protein DnaK YP_003307569.1 PFAM: aldose 1-epimerase; KEGG: abu:Abu_1477 aldose 1-epimerase family protein, LacX YP_003307570.1 KEGG: bmj:BMULJ_00606 molecular chaperone; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003307571.1 KEGG: sde:Sde_1446 hypothetical protein YP_003307572.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rpr:RP585 preprotein translocase subunit YajC YP_003307573.1 KEGG: pca:Pcar_1511 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_003307575.1 KEGG: similar to Dauer Up-Regulated family member (dur-1); TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003307576.1 KEGG: geo:Geob_3391 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; ribonuclease B OB region domain; SMART: Cold shock protein YP_003307577.1 KEGG: GK10316 gene product from transcript GK10316- RA YP_003307578.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: geo:Geob_2873 SsrA-binding protein YP_003307579.1 PFAM: aldo/keto reductase; KEGG: eca:ECA1962 oxidoreductase YP_003307580.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mlo:mlr4398 transcription regulator YP_003307581.1 KEGG: bja:blr0750 hypothetical protein YP_003307582.1 PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator YP_003307583.1 KEGG: pca:Pcar_2612 iron-sulfur flavoprotein YP_003307584.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pca:Pcar_2612 iron-sulfur flavoprotein YP_003307585.1 PFAM: protein of unknown function DUF1271; SMART: zinc finger CDGSH-type domain protein; KEGG: mlo:mlr4660 hypothetical protein YP_003307586.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ppd:Ppro_2970 GntR family transcriptional regulator YP_003307587.1 PFAM: FdrA family protein; KEGG: pmr:PMI2202 protein FdrA (multicopy suppressor of dominant negative FtsH mutants) YP_003307588.1 PFAM: protein of unknown function DUF1116; KEGG: seg:SG0542 hypothetical protein YP_003307589.1 KEGG: lhk:LHK_00981 YlbF YP_003307590.1 KEGG: ecw:EcE24377A_3199 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003307591.1 PFAM: citrate transporter; KEGG: hiq:CGSHiGG_06350 C4-dicarboxylate transporter YP_003307592.1 PFAM: amidohydrolase; amidohydrolase; KEGG: pen:PSEEN3598 amidohydrolase YP_003307593.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: par:Psyc_1149 GntR family transcriptional regulator YP_003307596.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: afw:Anae109_2748 trifunctional 2- polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein YP_003307597.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: azc:AZC_0475 regulatory protein YP_003307598.1 PFAM: Recombinase; Resolvase domain; KEGG: xau:Xaut_0277 resolvase domain-containing protein YP_003307609.1 KEGG: ccv:CCV52592_0062 hypothetical protein YP_003307614.1 PFAM: pentapeptide repeat containing protein; KEGG: hit:NTHI1489 hypothetical protein YP_003307616.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein YP_003307617.1 PFAM: ERF family protein; KEGG: eck:EC55989_2645 DNA single-strand annealing protein; essential recombination function protein Erf YP_003307618.1 KEGG: eci:UTI89_C2637 antirepressor protein YP_003307619.1 KEGG: tmz:Tmz1t_0251 transcriptional regulator, XRE family YP_003307620.1 TIGRFAM: phage regulatory protein, Rha family; PFAM: phage antirepressor protein; KEGG: cjd:JJD26997_1112 DNA-binding protein Roi YP_003307625.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hypothetical protein LOC100187311 YP_003307626.1 PFAM: protein of unknown function DUF955 YP_003307631.1 KEGG: nha:Nham_2018 hypothetical protein YP_003307632.1 KEGG: xac:XAC1911 hypothetical protein YP_003307633.1 KEGG: ent:Ent638_2616 hypothetical protein YP_003307634.1 KEGG: plu:plu3472 hypothetical protein YP_003307635.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: tdn:Suden_1565 DNA (cytosine-5-)- methyltransferase YP_003307636.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sbl:Sbal_3617 DNA methylase N-4/N-6 domain- containing protein YP_003307637.1 KEGG: hypothetical protein YP_003307639.1 KEGG: hypothetical protein YP_003307640.1 KEGG: sgl:SG2364 hypothetical protein YP_003307648.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: dol:Dole_2932 nuclease YP_003307649.1 KEGG: similar to major plasmodial myosin heavy chain YP_003307650.1 KEGG: hsm:HSM_0868 antirepressor protein YP_003307651.1 KEGG: vsa:VSAL_II0566 hypothetical protein YP_003307654.1 PFAM: AntA/AntB antirepressor domain protein; KEGG: gbm:Gbem_2989 phage regulatory protein, Rha family YP_003307655.1 PFAM: terminase small subunit; KEGG: sit:TM1040_0800 terminase small subunit YP_003307656.1 KEGG: ppg:PputGB1_1746 phage terminase, large subunit YP_003307657.1 KEGG: viral A-type inclusion protein YP_003307658.1 KEGG: bvi:Bcep1808_4531 SPP1 family phage head morphogenesis protein YP_003307659.1 KEGG: similar to P1725 YP_003307662.1 KEGG: AGAP002737-PA YP_003307666.1 TIGRFAM: phage head-tail adaptor YP_003307671.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: pmr:PMI1973 phage tail fiber protein (tape measure protein) YP_003307674.1 KEGG: plu:plu2879 hypothetical protein YP_003307675.1 KEGG: hiq:CGSHiGG_04750 hypothetical protein YP_003307676.1 KEGG: sei:SPC_1059 bacteriophage protein YP_003307677.1 KEGG: plu:plu3027 hypothetical protein YP_003307679.1 KEGG: bcj:BCAM1087 exported phage protein YP_003307680.1 KEGG: viral A-type inclusion protein YP_003307681.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRA1330 hypothetical protein YP_003307683.1 PFAM: Excalibur domain protein YP_003307684.1 KEGG: Viral A-type inclusion protein repeat YP_003307693.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; TPR repeat- containing protein; Tetratricopeptide TPR_3; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L) YP_003307695.1 KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003307696.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003307698.1 KEGG: abu:Abu_0461 membrane fusion component of efflux system YP_003307700.1 PFAM: protein of unknown function DUF218; KEGG: eck:EC55989_1545 hypothetical protein YP_003307701.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003307702.1 KEGG: hch:HCH_00407 hypothetical protein YP_003307704.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: kpn:KPN_00875 hypothetical protein YP_003307705.1 PFAM: small multi-drug export; KEGG: Os03g0800500; hypothetical protein YP_003307706.1 TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase P; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: glo:Glov_1814 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_003307707.1 PFAM: protein of unknown function DUF1538; KEGG: sun:SUN_1865 hypothetical protein YP_003307708.1 KEGG: dps:DP0349 nitrogen regulatory protein P-II family proteins YP_003307710.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rlt:Rleg2_2220 ABC transporter YP_003307711.1 PFAM: protein of unknown function DUF990; KEGG: bmj:BMULJ_04950 ABC-2 type transporter permease YP_003307712.1 PFAM: protein of unknown function DUF990; KEGG: bba:Bd3592 hypothetical protein YP_003307713.1 PFAM: beta-lactamase; KEGG: msu:MS2011 GloB protein YP_003307715.1 KEGG: bcc:BCc_107 NADH dehydrogenase I chain L YP_003307719.1 KEGG: hso:HS_0337 hypothetical protein YP_003307722.1 KEGG: spe:Spro_4914 hypothetical protein YP_003307723.1 PFAM: major tail tube protein; KEGG: spe:Spro_4913 major tail tube protein YP_003307725.1 KEGG: hypothetical protein YP_003307726.1 KEGG: msu:MS0085 hypothetical protein YP_003307727.1 KEGG: spe:Spro_4910 late control D family protein YP_003307728.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: eca:ECA3736 bacteriophage baseplate protein YP_003307729.1 KEGG: actin binding protein YP_003307730.1 KEGG: spe:Spro_4958 hypothetical protein YP_003307731.1 PFAM: Baseplate J family protein; KEGG: spe:Spro_4957 baseplate J family protein YP_003307732.1 KEGG: ect:ECIAI39_4427 phage tail protein YP_003307734.1 KEGG: plu:plu2959 hypothetical protein YP_003307735.1 KEGG: similar to synaptonemal complex protein 1 YP_003307738.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pla:Plav_1920 methyltransferase type 11 YP_003307739.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_3083 acetyltransferase YP_003307740.1 PFAM: phosphoglycerate mutase; KEGG: nmu:Nmul_A1121 phosphoglycerate mutase 1 family protein YP_003307741.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: sme:SMc03140 transcription regulator protein YP_003307742.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: ppw:PputW619_2057 xanthine permease YP_003307743.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: avi:Avi_5084 CMP/dCMP deaminase zinc-binding YP_003307744.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: pca:Pcar_0417 D-3-phosphoglycerate dehydrogenase YP_003307745.1 PFAM: KDPG and KHG aldolase; KEGG: scl:sce5154 KDPG and KHG aldolase YP_003307747.1 PFAM: PTS system fructose subfamily IIA component; KEGG: sat:SYN_02844 pts system fructose IIA component YP_003307748.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: see:SNSL254_A4048 PTS system mannose/fructose/sorbose family IID component YP_003307749.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: stm:STM0575 inner membrane protein YP_003307750.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: ecv:APECO1_2997 hypothetical protein YP_003307751.1 KEGG: stm:STM0571 inner membrane protein YP_003307752.1 KEGG: viral A-type inclusion protein YP_003307754.1 KEGG: spe:Spro_4380 hypothetical protein YP_003307755.1 KEGG: vsa:VSAL_I0109 hypothetical protein YP_003307756.1 KEGG: vsa:VSAL_I0108 membrane protein YP_003307757.1 KEGG: esa:ESA_00251 hypothetical protein YP_003307758.1 PFAM: protein of unknown function DUF1341; KEGG: sed:SeD_A4160 2-dehydro-3- deoxyphosphogluconate aldolase YP_003307759.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: sml:Smlt1009 glycine-rich autotransporter protein YP_003307760.1 PFAM: ROK family protein; KEGG: vfi:VF_0606 glucokinase YP_003307761.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: kpe:KPK_2351 transcriptional repressor PurR YP_003307765.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: eci:UTI89_C1627 EntS/YbdA MFS transporter YP_003307766.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bch:Bcen2424_6767 outer membrane autotransporter YP_003307767.1 PFAM: glycoside hydrolase family 1; KEGG: elf:LF82_0158 6-phospho-beta-glucosidase AscB YP_003307768.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: elf:LF82_3382 uncharacterized protein YieK YP_003307772.1 PFAM: ApbE family lipoprotein; KEGG: sat:SYN_01668 iron-sulfur cluster assembly/repair protein YP_003307773.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spl:Spea_2355 electron transport complex protein RnfC YP_003307774.1 PFAM: NQR2 and RnfD family protein; KEGG: sat:SYN_01663 sodium-translocating NADH- quinone reductase subunit B YP_003307775.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0188 PTS system, IIABC component YP_003307776.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0189 mandelate racemase / muconate lactonizing enzyme YP_003307777.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: eca:ECA0190 GntR family transcriptional regulator YP_003307778.1 PFAM: protein of unknown function DUF333; KEGG: abc:ACICU_01322 hemolysin YP_003307780.1 PFAM: protein of unknown function DUF454; KEGG: pmu:PM0679 hypothetical protein YP_003307782.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307783.1 KEGG: vvy:VV2895 hypothetical protein YP_003307784.1 KEGG: glo:Glov_0948 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; PFAM: Rhodanese domain protein; SMART: rhodanese YP_003307785.1 KEGG: hypothetical protein YP_003307786.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003307787.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: smt:Smal_0854 outer membrane autotransporter barrel domain protein YP_003307788.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: ecz:ECS88_1500 autotransported outer membrane protein involved in cell adhesion YP_003307789.1 KEGG: hypothetical protein ; K06867 YP_003307794.1 PFAM: OmpA/MotB domain protein; KEGG: smt:Smal_0800 OmpA/MotB domain protein YP_003307795.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: atc:AGR_C_1920 hypothetical protein YP_003307796.1 KEGG: conserved hypothetical protein YP_003307797.1 PFAM: phosphoglycerate mutase; KEGG: glo:Glov_3084 alpha-ribazole phosphatase YP_003307798.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: tau:Tola_1663 cobalamin 5'-phosphate synthase YP_003307799.1 KEGG: SLEI family protein YP_003307801.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: ppd:Ppro_1268 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003307802.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: glo:Glov_3660 cobalt transporter CbiM YP_003307803.1 PFAM: Cobalt transporter CbiN; KEGG: cko:CKO_00816 cobalt transporter CbiN YP_003307804.1 PFAM: cobalt transporter; KEGG: ppd:Ppro_1224 cobalt ABC transporter inner membrane subunit CbiQ YP_003307805.1 KEGG: tau:Tola_1666 cobalt ABC transporter ATPase subunit; TIGRFAM: cobalt ABC transporter ATPase; PFAM: ABC transporter related; SMART: ATPase AAA YP_003307806.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: tau:Tola_1681 cobyrinic acid a,c-diamide synthase YP_003307807.1 PFAM: precorrin-8X methylmutase CbiC/CobH; KEGG: gbm:Gbem_3545 precorrin-8X methylmutase CbiC/CobH YP_003307808.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: plu:plu2996 cobalt-precorrin-6A synthase YP_003307809.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE2721 cobalt-precorrin-6Y C(5)- methyltransferase YP_003307810.1 TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: methyltransferase small; KEGG: geo:Geob_0032 precorrin-6y C5,15- methyltransferase (decarboxylating), CbiE subunit YP_003307811.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dat:HRM2_02310 CbiL YP_003307812.1 KEGG: tau:Tola_1675 precorrin-4 C11- methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003307813.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: tau:Tola_1674 cobalamin (vitamin B12) biosynthesis CbiG protein YP_003307814.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gme:Gmet_0485 cobyric acid synthase CobQ:precorrin-3B C17-methyltransferase region YP_003307815.1 PFAM: cobalbumin biosynthesis protein; KEGG: yen:YE2710 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_003307817.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: tau:Tola_1665 cobyric acid synthase CobQ YP_003307818.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: tau:Tola_1680 cobalamin biosynthesis protein CobD YP_003307819.1 PFAM: aminotransferase class I and II; KEGG: tau:Tola_1705 L-threonine-O-3-phosphate decarboxylase YP_003307820.1 PFAM: shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; KEGG: dde:Dde_2025 glutamyl-tRNA reductase YP_003307821.1 KEGG: dat:HRM2_35950 HemC; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase YP_003307822.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; KEGG: dat:HRM2_35960 HemD YP_003307823.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: gur:Gura_4245 glutamate-1-semialdehyde aminotransferase YP_003307824.1 KEGG: ppd:Ppro_2806 nicotinate-nucleotide-- dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate- nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003307825.1 PFAM: phosphoglycerate mutase; KEGG: pmu:PM0634 hypothetical protein YP_003307826.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: ppd:Ppro_0442 delta-aminolevulinic acid dehydratase YP_003307827.1 TIGRFAM: precorrin-6x reductase; PFAM: precorrin-6x reductase CbiJ/CobK; KEGG: kpe:KPK_0925 precorrin-6x reductase YP_003307829.1 PFAM: microcompartments protein; KEGG: yen:YE2729 propanediol utilization protein YP_003307830.1 PFAM: dehydratase large subunit; KEGG: tau:Tola_1686 glycerol dehydratase YP_003307831.1 PFAM: dehydratase medium subunit; KEGG: ecg:E2348C_2133 propanediol dehydratase, medium subunit, AdoCbl-dependent YP_003307832.1 PFAM: dehydratase small subunit; KEGG: seg:SG2069 diol dehydratase small subunit YP_003307833.1 PFAM: Diol/glycerol dehydratase reactivating factor large subunit; KEGG: seh:SeHA_C2266 glycerol dehydratase reactivation factor large subunit YP_003307834.1 KEGG: cko:CKO_00792 hypothetical protein YP_003307835.1 PFAM: protein of unknown function DUF336; KEGG: tau:Tola_1696 ATP/cobalamin adenosyltransferase YP_003307836.1 PFAM: aldehyde dehydrogenase; KEGG: ecc:c4534 ethanolamine utilization protein EutE YP_003307837.1 PFAM: microcompartments protein; KEGG: dde:Dde_3278 microcompartment protein YP_003307838.1 PFAM: microcompartments protein; KEGG: dde:Dde_3270 ethanolamine utilization protein EutM precursor YP_003307839.1 PFAM: microcompartments protein; KEGG: dds:Ddes_1372 microcompartments protein YP_003307840.1 TIGRFAM: ethanolamine utilization protein, EutP; KEGG: tau:Tola_1702 ethanolamine utilization protein, EutP YP_003307841.1 PFAM: microcompartments protein; KEGG: dal:Dalk_4994 microcompartments protein YP_003307842.1 PFAM: microcompartments protein; KEGG: dde:Dde_3270 ethanolamine utilization protein EutM precursor YP_003307843.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: ecp:ECP_4603 hypothetical protein YP_003307844.1 PFAM: cobalamin adenosyltransferase; KEGG: maq:Maqu_1230 cobalamin adenosyltransferase YP_003307845.1 PFAM: propanediol utilization protein; KEGG: dde:Dde_3276 propanediol utilization protein- like YP_003307847.1 PFAM: ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: dde:Dde_3273 ethanolamine utilization protein EutN YP_003307848.1 KEGG: dds:Ddes_1367 hypothetical protein YP_003307849.1 PFAM: iron-containing alcohol dehydrogenase; 3- dehydroquinate synthase; KEGG: pmr:PMI2717 propanediol utilization protein (alcohol dehydrogenase) YP_003307850.1 PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: gme:Gmet_0660 response regulator receiver/ANTAR domain-containing protein YP_003307851.1 PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; KEGG: abu:Abu_1163 two-component sensor histidine kinase YP_003307852.1 PFAM: ethanolamine utilisation EutA; KEGG: maq:Maqu_1239 reactivating factor for ethanolamine ammonia lyase YP_003307853.1 PFAM: ethanolamine ammonia lyase large subunit; KEGG: ecy:ECSE_2731 ethanolamine ammonia-lyase heavy chain YP_003307854.1 PFAM: ethanolamine ammonia-lyase light chain; KEGG: sea:SeAg_B2602 ethanolamine ammonia-lyase small subunit YP_003307855.1 PFAM: microcompartments protein; KEGG: maq:Maqu_1242 microcompartments protein YP_003307856.1 PFAM: ethanolamine utilisation protein EutH; KEGG: ecm:EcSMS35_2598 ethanolamine utilization protein EutH YP_003307857.1 PFAM: ethanolamine utilisation EutQ family protein; Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; KEGG: set:SEN2448 ethanolamine utilization protein EutQ YP_003307858.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: bcj:BCAL3353 outer membrane autotransporter YP_003307859.1 TIGRFAM: conserved repeat domain protein; KEGG: vha:VIBHAR_05162 hypothetical protein YP_003307860.1 KEGG: ppr:PBPRA1141 hypothetical protein YP_003307862.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: asa:ASA_3580 sorbitol-6-phosphate dehydrogenase YP_003307863.1 KEGG: tau:Tola_1877 PTS system, glucitol/sorbitol- specific, IIBC subunit; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein YP_003307864.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: asa:ASA_3583 PTS system, glucitol/sorbitol- specific IIBC component YP_003307865.1 PFAM: glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator YP_003307866.1 PFAM: iron-containing alcohol dehydrogenase; 3- dehydroquinate synthase; KEGG: ecv:APECO1_2102 glycerol dehydrogenase YP_003307867.1 PFAM: transaldolase; KEGG: tau:Tola_1893 transaldolase YP_003307868.1 PFAM: sugar-binding domain protein; KEGG: kpn:KPN_04408 SorC family transcriptional regulator YP_003307869.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: rsq:Rsph17025_2377 DeoR family transcriptional regulator YP_003307870.1 PFAM: sugar-binding domain protein; KEGG: efe:EFER_4083 sorbitol/sorbose operon regulator (Sor operon activator) YP_003307871.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vsp:VS_2649 PTS system glucose-specific EIICBA component YP_003307872.1 KEGG: ecc:c4538 pyruvate formate-lyase 3 activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein YP_003307873.1 KEGG: ses:SARI_02080 hypothetical protein; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003307875.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: sun:SUN_2357 hypothetical protein YP_003307876.1 KEGG: psb:Psyr_3851 hypothetical protein YP_003307877.1 KEGG: pat:Patl_2980 hypothetical protein YP_003307879.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cju:C8J_1621 GNAT family acetyltransferase YP_003307880.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: sfu:Sfum_2340 redoxin domain protein YP_003307881.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8 YP_003307882.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: hdu:HD0207 hypothetical protein YP_003307883.1 KEGG: YALI0D13750p YP_003307884.1 PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: tdn:Suden_0316 histidine kinase YP_003307885.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_0707 transcriptional regulator YP_003307886.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: predicted protein YP_003307887.1 KEGG: ppd:Ppro_0098 hypothetical protein YP_003307889.1 TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase F; KEGG: ade:Adeh_2055 oligopeptidase F YP_003307890.1 TIGRFAM: PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; KEGG: pmu:PM0896 glucose-specific PTS system component YP_003307891.1 KEGG: pmu:PM1543 hypothetical protein YP_003307892.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: gme:Gmet_1986 pantothenate kinase YP_003307893.1 KEGG: lpp:lpp0616 formamidopyrimidine-DNA glycosylase YP_003307894.1 PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: cja:CJA_1940 thiosulfate sulfurtransferase YP_003307895.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oca:OCAR_4314 short-chain dehydrogenase/reductase SDR YP_003307896.1 PFAM: alpha/beta hydrolase fold; KEGG: oan:Oant_1717 lysophospholipase L2 YP_003307897.1 PFAM: aldehyde dehydrogenase; KEGG: hypothetical protein YP_003307898.1 PFAM: aminotransferase class V; KEGG: gur:Gura_1493 aminotransferase, class V YP_003307899.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dps:DP2376 biotin synthase YP_003307900.1 PFAM: glutaredoxin; KEGG: abm:ABSDF1486 alkyl hydroperoxide reductase subunit, FAD/NAD(P)-binding, detoxification of hydroperoxides YP_003307901.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bba:Bd2517 alkyl hydroperoxide reductase, C22 subunit YP_003307902.1 PFAM: ROK family protein; KEGG: fph:Fphi_0224 ROK family protein YP_003307903.1 KEGG: scl:sce5606 hypothetical protein YP_003307904.1 PFAM: polyphosphate kinase; KEGG: reh:H16_A2437 polyphosphate kinase YP_003307905.1 PFAM: von Willebrand factor A; KEGG: scl:sce7395 secreted protein YP_003307906.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_0033 carboxylate/amino acid/amine transporter YP_003307907.1 KEGG: mmw:Mmwyl1_0128 methylated-DNA--protein- cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; Ada metal-binding domain protein; SMART: helix-turn-helix- domain containing protein AraC type YP_003307908.1 KEGG: bpy:Bphyt_5572 hypothetical protein YP_003307910.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_2277 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003307911.1 KEGG: dde:Dde_2943 aldehyde:ferredoxin oxidoreductase, tungsten-containing, PFAM: aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase YP_003307914.1 PFAM: deoxynucleoside kinase; KEGG: hypothetical protein YP_003307915.1 KEGG: asu:Asuc_0639 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_003307916.1 KEGG: hch:HCH_02209 putrescine/spermidine ABC transporter ATPase protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA YP_003307917.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: scl:sce9305 spermidine/putrescine ABC transporter permease YP_003307918.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sea:SeAg_B1961 spermidine/putrescine ABC transporter membrane protein YP_003307919.1 PFAM: DEAD/DEAH box helicase; helicase domain protein; DbpA RNA-binding domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase; KEGG: dde:Dde_0152 DEAD/DEAH box helicase-like YP_003307921.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: pca:Pcar_1333 triosephosphate isomerase YP_003307922.1 TIGRFAM: phosphoglycerate mutase, 2,3- bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; KEGG: gme:Gmet_3203 phosphoglyceromutase YP_003307923.1 TIGRFAM: preprotein translocase, SecG subunit YP_003307924.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: pca:Pcar_2328 recombination factor protein RarA YP_003307925.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: abu:Abu_1147 efflux protein YP_003307926.1 KEGG: MAEBL YP_003307927.1 KEGG: ppd:Ppro_1040 hypothetical protein YP_003307929.1 KEGG: viral A-type inclusion protein YP_003307930.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpt:Bpet2934 PhnB protein YP_003307931.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sat:SYN_00061 phosphate regulon sensor protein YP_003307932.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ppd:Ppro_3155 two component transcriptional regulator YP_003307933.1 KEGG: similar to LOC558785 protein YP_003307935.1 KEGG: gbm:Gbem_3096 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); anticodon-binding domain protein YP_003307936.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dal:Dalk_2756 aspartyl-tRNA synthetase YP_003307937.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cja:CJA_3379 MATE efflux family protein subfamily YP_003307939.1 PFAM: helix-turn-helix HxlR type; KEGG: hch:HCH_06733 transcriptional regulator YP_003307940.1 PFAM: PEBP family protein; KEGG: asu:Asuc_1366 PEBP family protein YP_003307941.1 KEGG: mxa:MXAN_3125 hypothetical protein YP_003307943.1 PFAM: conserved hypothetical protein; KEGG: sat:SYN_00941 hypothetical protein YP_003307944.1 KEGG: dal:Dalk_0774 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: excinuclease ABC C subunit domain protein YP_003307945.1 KEGG: conserved hypothetical protein YP_003307946.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rlt:Rleg2_4171 ABC transporter YP_003307947.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003307948.1 PFAM: inner-membrane translocator; KEGG: cvi:CV_2350 sugar ABC transporter permease YP_003307949.1 KEGG: hip:CGSHiEE_04620 prophage repressor CI YP_003307952.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: cjd:JJD26997_0641 phosphomethylpyrimidine kinase YP_003307953.1 KEGG: dal:Dalk_0685 hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_003307954.1 KEGG: sfu:Sfum_3508 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003307955.1 PFAM: TENA/THI-4 domain protein; KEGG: hpa:HPAG1_1226 transcriptional regulator YP_003307957.1 TIGRFAM: excisionase; PFAM: prophage CP4-57 regulator; KEGG: xau:Xaut_3952 DNA binding domain-containing protein YP_003307958.1 TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dvm:DvMF_2478 molybdate ABC transporter inner membrane subunit YP_003307959.1 TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dal:Dalk_3646 molybdenum ABC transporter periplasmic molybdate-binding protein YP_003307960.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: xau:Xaut_1937 translation initiation factor IF-3 YP_003307961.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: cbc:CbuK_1189 50S ribosomal protein L35P YP_003307962.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: cla:Cla_0035 50S ribosomal protein L20 YP_003307963.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: hit:NTHI1455 DNA translocase FtsK YP_003307964.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: geo:Geob_3485 cell shape determining protein, MreB/Mrl family YP_003307965.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mxa:MXAN_3840 segregation and condensation protein B YP_003307966.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: vsa:VSAL_I1987 ribosomal large subunit pseudouridine synthase F YP_003307967.1 PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: hypothetical protein YP_003307968.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: sat:SYN_00307 aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit C YP_003307969.1 KEGG: aeh:Mlg_0167 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: amidase YP_003307970.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB/Yqey domain protein; GatB central domain protein; KEGG: sat:SYN_00309 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003307971.1 PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; KEGG: gbm:Gbem_0485 penicillin-binding protein transpeptidase YP_003307972.1 KEGG: sat:SYN_01336 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase; helicase; SMART: DEAD-like helicase ; helicase YP_003307973.1 KEGG: pca:Pcar_0245 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003307975.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: pca:Pcar_0244 methionyl-tRNA formyltransferase YP_003307976.1 PFAM: Rex DNA-binding domain protein; CoA-binding domain protein; KEGG: dde:Dde_2702 redox-sensing transcriptional repressor REX YP_003307977.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: cjr:CJE0942 FolD bifunctional protein YP_003307978.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: nam:NAMH_0057 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_003307980.1 KEGG: YNK1; nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003307981.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: sfu:Sfum_2202 CBS domain containing membrane protein YP_003307982.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dat:HRM2_22470 hypothetical protein YP_003307983.1 PFAM: NUDIX hydrolase; KEGG: sfu:Sfum_0480 NUDIX hydrolase YP_003307984.1 TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: gur:Gura_2616 adenine phosphoribosyltransferase YP_003307985.1 KEGG: geo:Geob_2145 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003307986.1 KEGG: gme:Gmet_0852 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: queuine/other tRNA-ribosyltransferase YP_003307987.1 KEGG: wbr:WGLp481 hypothetical protein YP_003307989.1 PFAM: O-methyltransferase family 3; KEGG: wpi:WPa_0942 O-methyltransferase family protein YP_003307990.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: pca:Pcar_1565 Na+/phosphate symporter YP_003307991.1 KEGG: hypothetical protein YP_003307992.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: dat:HRM2_06120 hypothetical protein YP_003307993.1 PFAM: alpha/beta hydrolase fold; KEGG: maq:Maqu_1043 hypothetical protein YP_003307994.1 PFAM: protein of unknown function DUF187; KEGG: bte:BTH_I2393 FenI protein YP_003307995.1 KEGG: pfo:Pfl01_3479 hypothetical protein YP_003307997.1 PFAM: xylose isomerase; KEGG: bja:bll7636 hypothetical protein YP_003307998.1 PFAM: aldo/keto reductase; KEGG: rhi:NGR_c22210 oxidoreductase YP_003307999.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ecy:ECSE_3427 galactosamine-6- phosphate isomerase YP_003308000.1 KEGG: ppr:PBPRA0496 phosphotransferase system cellobiose-specific component IIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003308001.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: vfm:VFMJ11_0618 BglE YP_003308002.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: yen:YE0970 N, N'-diacetylchitobiose-specific PTS system transporter subunit IIA YP_003308003.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix type 11 domain protein; KEGG: asu:Asuc_0583 transcriptional antiterminator, BglG YP_003308004.1 KEGG: Viral A-type inclusion protein repeat YP_003308007.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: wbm:Wbm0785 DnaJ-like molecular chaperone YP_003308008.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein YP_003308009.1 KEGG: sil:SPO1063 hypothetical protein YP_003308010.1 SMART: protein phosphatase 2C domain protein; KEGG: rsq:Rsph17025_3425 hypothetical protein YP_003308011.1 SMART: protein phosphatase 2C domain protein; KEGG: azo:azo3885 phosphoprotein phosphatase YP_003308012.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sil:SPO1059 serine/threonine protein kinase YP_003308013.1 KEGG: hypothetical protein YP_003308014.1 KEGG: hypothetical protein YP_003308015.1 KEGG: cco:CCC13826_1195 ribosomal protein L7/L12 YP_003308016.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain-containing protein YP_003308018.1 KEGG: CAP-Gly domain containing protein ; K04648 dynactin 1 YP_003308019.1 KEGG: hypothetical protein YP_003308020.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: cla:Cla_0919 AcrA/AcrE family efflux protein YP_003308021.1 KEGG: lpp:lpp0078 hypothetical protein YP_003308022.1 PFAM: peptidase M23; KEGG: wsu:WS1241 hypothetical protein YP_003308023.1 PFAM: protein of unknown function DUF81; KEGG: smd:Smed_1748 hypothetical protein YP_003308024.1 KEGG: ecc:c0325 hypothetical protein YP_003308025.1 KEGG: gur:Gura_0291 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC subunit B; PFAM: helicase; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003308026.1 PFAM: arsenate reductase; KEGG: bba:Bd0355 arsenate reductase YP_003308027.1 KEGG: nam:NAMH_1360 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_003308028.1 KEGG: TPR Domain containing protein YP_003308031.1 PFAM: SMF family protein; KEGG: ppd:Ppro_0529 DNA protecting protein DprA YP_003308032.1 PFAM: Recombinase; Resolvase domain; KEGG: wpi:WPa_0411 site-specific recombinase, resolvase family YP_003308034.1 TIGRFAM: phage recombination protein Bet; PFAM: RecT protein; KEGG: cjd:JJD26997_0851 prophage LambdaCh01, recombination protein Bet YP_003308035.1 KEGG: viral A-type inclusion protein YP_003308041.1 PFAM: peptidase S24 and S26 domain protein; KEGG: acb:A1S_2037 EsvI YP_003308042.1 PFAM: tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; KEGG: reh:H16_A0884 hypothetical protein YP_003308043.1 KEGG: reh:H16_A0883 hypothetical protein YP_003308044.1 KEGG: pna:Pnap_4954 hypothetical protein YP_003308046.1 KEGG: hypothetical protein YP_003308047.1 PFAM: DnaB domain protein helicase; KEGG: abu:Abu_0658 replicative DNA helicase YP_003308050.1 KEGG: hypothetical protein YP_003308052.1 KEGG: wbr:WGLp142 hypothetical protein YP_003308057.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; KEGG: par:Psyc_1001 PBSX family phage terminase large subunit YP_003308058.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; KEGG: nme:NMB1096 hypothetical protein YP_003308059.1 TIGRFAM: phage virion morphogenesis protein; KEGG: nmn:NMCC_1030 hypothetical protein YP_003308060.1 KEGG: similar to SP2523 CG18768-PC, isoform C YP_003308063.1 KEGG: hypothetical protein YP_003308065.1 KEGG: pst:PSPTO_4050 hypothetical protein YP_003308066.1 KEGG: LL5 beta protein YP_003308067.1 KEGG: viral A-type inclusion protein YP_003308068.1 KEGG: conserved hypothetical protein YP_003308074.1 KEGG: pag:PLES_08281 hypothetical protein YP_003308076.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRA1330 hypothetical protein YP_003308078.1 TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: dvl:Dvul_1067 toxin secretion/phage lysis holin YP_003308079.1 KEGG: hypothetical protein YP_003308080.1 KEGG: plu:plu1837 hypothetical protein YP_003308081.1 KEGG: hypothetical protein YP_003308086.1 KEGG: hypothetical LOC582013 YP_003308087.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mfa:Mfla_2359 MarR family transcriptional regulator YP_003308088.1 KEGG: pfl:PFL_0642 hypothetical protein YP_003308089.1 PFAM: beta-lactamase; KEGG: reu:Reut_A3379 beta-lactamase-like YP_003308093.1 PFAM: protein of unknown function DUF421; KEGG: btr:Btr_0801 hypothetical protein YP_003308095.1 KEGG: rme:Rmet_5016 hypothetical protein YP_003308096.1 PFAM: permease; KEGG: cha:CHAB381_0335 permease YP_003308097.1 TIGRFAM: redox-active disulfide protein 2; KEGG: geo:Geob_3502 redox-active disulfide protein 2 YP_003308098.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sat:SYN_00347 ArsR family transcriptional regulator YP_003308099.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: geo:Geob_0479 C_GCAxxG_C_C family protein YP_003308100.1 TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: aeh:Mlg_2709 bile acid:sodium symporter YP_003308101.1 PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: cju:C8J_1458 arsenate reductase YP_003308102.1 PFAM: protein of unknown function DUF1121; KEGG: dol:Dole_1232 hypothetical protein YP_003308103.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003308104.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: amc:MADE_01969 alcohol dehydrogenase, zinc- containing YP_003308105.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: geo:Geob_1285 MarR family transcriptional regulator YP_003308106.1 KEGG: rfr:Rfer_2839 hypothetical protein YP_003308107.1 KEGG: avi:Avi_0081 hypothetical protein YP_003308108.1 KEGG: sil:SPO1693 hypothetical protein YP_003308109.1 KEGG: shw:Sputw3181_0981 hypothetical protein YP_003308113.1 KEGG: gur:Gura_1410 hypothetical protein YP_003308114.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: TPR Domain containing protein YP_003308115.1 PFAM: hypothetical protein; Tetratricopeptide TPR_2 repeat protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: pmu:PM2006 hypothetical protein YP_003308118.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat- containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: hypothetical protein YP_003308119.1 PFAM: BRO domain protein; KEGG: plu:plu2883 hypothetical protein YP_003308120.1 KEGG: hypothetical protein YP_003308124.1 KEGG: hypothetical protein YP_003308125.1 KEGG: 235 kDa rhoptry protein YP_003308126.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_0391 aldo/keto reductase family oxidoreductase YP_003308127.1 PFAM: cupin; Cupin domain protein; KEGG: pfo:Pfl01_3712 cupin region YP_003308130.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: stm:STM1444 transcriptional regulator SlyA YP_003308131.1 KEGG: hypothetical protein YP_003308132.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asu:Asuc_0740 prolyl aminopeptidase YP_003308133.1 KEGG: cco:CCC13826_0641 hypothetical protein YP_003308134.1 KEGG: plu:plu3925 hypothetical protein YP_003308136.1 PFAM: protein of unknown function DUF218; KEGG: set:SEN0100 probable secreted protein YP_003308137.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: pca:Pcar_2913 MarR family transcriptional regulator YP_003308138.1 KEGG: ccv:CCV52592_0283 CTA2 subfamily 1 protein YP_003308139.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: fph:Fphi_1728 drug/metabolite transporter superfamily protein YP_003308141.1 KEGG: sun:SUN_1216 hypothetical protein YP_003308142.1 KEGG: eck:EC55989_0558 rhs core protein with extension YP_003308143.1 KEGG: hypothetical protein YP_003308144.1 PFAM: pentapeptide repeat protein; KEGG: rty:RT0551 hypothetical protein YP_003308145.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pfo:Pfl01_4529 phenazine biosynthesis PhzC/PhzF protein YP_003308148.1 PFAM: helix-turn-helix HxlR type; KEGG: pmu:PM1471 hypothetical protein YP_003308151.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_1173 cupin 2 domain-containing protein YP_003308152.1 PFAM: protein of unknown function UPF0157; KEGG: geo:Geob_2091 protein of unknown function UPF0157 YP_003308153.1 KEGG: dal:Dalk_3341 hypothetical protein YP_003308154.1 KEGG: predicted protein YP_003308156.1 KEGG: hypothetical protein YP_003308157.1 PFAM: MORN variant repeat protein; KEGG: noc:Noc_0395 hypothetical protein YP_003308158.1 KEGG: pmr:PMI1798 lipoprotein YP_003308159.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gsu:GSU0696 glucose 1-dehydrogenase YP_003308160.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: SLEI family protein YP_003308163.1 KEGG: mxa:MXAN_6509 acid phosphatase YP_003308165.1 KEGG: hypothetical protein YP_003308166.1 PFAM: esterase; KEGG: bpy:Bphyt_5901 esterase YP_003308168.1 PFAM: protein of unknown function UPF0027; KEGG: glo:Glov_0158 protein of unknown function UPF0027 YP_003308169.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: eci:UTI89_C1627 EntS/YbdA MFS transporter YP_003308170.1 PFAM: protein of unknown function UPF0027; KEGG: glo:Glov_0158 protein of unknown function UPF0027 YP_003308173.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: tau:Tola_0164 alpha,alpha-phosphotrehalase YP_003308174.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: sit:TM1040_0624 secretion chaperone CsaA YP_003308175.1 KEGG: bcm:Bcenmc03_5262 hypothetical protein YP_003308176.1 KEGG: sfu:Sfum_0263 ATPase AAA; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA central domain protein; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA YP_003308177.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; M trans- acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003308178.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: asu:Asuc_0456 mannitol-1-phosphate 5- dehydrogenase YP_003308180.1 PFAM: integrase family protein; KEGG: cha:CHAB381_1561 site-specific recombinase phage integrase family protein YP_003308182.1 PFAM: protein of unknown function DUF955; KEGG: vvu:VV1_0393 ribosomal protein L22 YP_003308183.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: wpi:WPa_1341 transcriptional regulator YP_003308195.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3417 phage regulatory protein YP_003308201.1 KEGG: hypothetical protein YP_003308202.1 KEGG: aha:AHA_1359 structural toxin protein RtxA YP_003308203.1 KEGG: ecr:ECIAI1_2661 conserved hypothetical protein from bacteriophage origin YP_003308204.1 KEGG: ypy:YPK_1207 hypothetical protein YP_003308206.1 PFAM: virulence-associated E family protein; KEGG: dno:DNO_0266 virulence-associated protein VapE2 YP_003308207.1 PFAM: VRR-NUC domain protein; KEGG: ypy:YPK_1202 VRR-NUC domain-containing protein YP_003308208.1 PFAM: SNF2-related protein; SMART: DEAD-like helicase; KEGG: xfm:Xfasm12_0427 hypothetical protein YP_003308214.1 KEGG: pat:Patl_0697 P2 family phage major capsid protein YP_003308216.1 KEGG: viral A-type inclusion protein YP_003308218.1 PFAM: terminase small subunit; KEGG: bmj:BMULJ_01412 bacteriophage terminase small subunit YP_003308219.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; protein of unknown function DUF1545; KEGG: par:Psyc_1001 PBSX family phage terminase large subunit YP_003308220.1 PFAM: portal protein SPP1; KEGG: abcA2; ABC transporter A family protein YP_003308221.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; KEGG: abc:ACICU_01216 phage head morphogenesis protein, SPP1 gp7 YP_003308223.1 PFAM: minor structural GP20 protein; KEGG: hypothetical protein YP_003308224.1 KEGG: abn:AB57_3220 prophage LambdaCh01, coat protein YP_003308232.1 PFAM: XkdN-like protein YP_003308234.1 TIGRFAM: phage tape measure protein; KEGG: ngo:NGO0522 tail length tape measure protein, phage associated protein YP_003308236.1 KEGG: hypothetical protein YP_003308239.1 KEGG: lhk:LHK_01145 probable phage FluMu protein GP47 YP_003308241.1 KEGG: plu:plu3331 hypothetical protein YP_003308242.1 KEGG: viral A-type inclusion protein YP_003308243.1 KEGG: atc:AGR_C_3833 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003308246.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: pin:Ping_3552 1-phosphofructokinase YP_003308247.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: hypothetical protein YP_003308249.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: cko:CKO_02413 alpha-mannosidase YP_003308250.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: eta:ETA_12760 PTS system, fructose-specific IIBC component YP_003308251.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: csa:Csal_2646 phosphotransferase system, fructose IIC component YP_003308252.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsa:VSAL_II0894 PTS system, IIBC component YP_003308253.1 PFAM: initiator RepB protein; KEGG: rhoptry protein YP_003308254.1 KEGG: hypothetical protein YP_003308255.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecz:ECS88_1500 autotransported outer membrane protein involved in cell adhesion YP_003308256.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; regulatory protein DeoR; KEGG: asu:Asuc_0583 transcriptional antiterminator, BglG YP_003308257.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_01747 PTS family enzyme IIA, mannitol- specific, cryptic YP_003308258.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: vsp:VS_II0314 PTS system, IIB component YP_003308259.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: yen:YE1328 ascorbate-specific PTS system enzyme IIC YP_003308260.1 PFAM: transketolase; KEGG: gur:Gura_0491 transketolase domain-containing protein YP_003308261.1 PFAM: transketolase; transketolase domain protein; KEGG: gur:Gura_0492 transketolase, central region YP_003308262.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: bmj:BMULJ_04389 outer membrane autotransporter barrel YP_003308263.1 KEGG: ret:RHE_CH03540 hypothetical protein YP_003308264.1 PFAM: helix-turn-helix HxlR type; KEGG: wsu:WS1168 hypothetical protein YP_003308265.1 PFAM: nitroreductase; KEGG: gur:Gura_1344 nitroreductase YP_003308266.1 KEGG: ses:SARI_03217 hypothetical protein YP_003308267.1 KEGG: cvi:CV_1336 hypothetical protein YP_003308268.1 KEGG: cco:CCC13826_0641 hypothetical protein YP_003308269.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: dal:Dalk_1413 alpha/beta hydrolase fold-3 domain protein YP_003308270.1 PFAM: ABC transporter; KEGG: pag:PLES_25922 inner membrane permease YP_003308271.1 PFAM: ABC transporter; KEGG: pfl:PFL_2797 ABC transporter ATP-binding protein/permease YP_003308272.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pag:PLES_25911 ATP-binding protein YP_003308273.1 PFAM: secretion protein HlyD; KEGG: nmu:Nmul_A1422 secretion protein HlyD YP_003308274.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein YP_003308275.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bci:BCI_0083 transcriptional regulator SlyA YP_003308276.1 PFAM: protein of unknown function DUF1275; KEGG: msl:Msil_2609 protein of unknown function DUF1275 YP_003308277.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bpy:Bphyt_0961 LacI family transcriptional regulator YP_003308278.1 PFAM: xylose isomerase; KEGG: mlo:mlr1887 hypothetical protein YP_003308279.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mmw:Mmwyl1_1857 periplasmic binding protein/LacI transcriptional regulator YP_003308280.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hap:HAPS_1727 ABC D-ribose transporter ATP binding protein RbsA YP_003308281.1 PFAM: inner-membrane translocator; KEGG: hsm:HSM_0091 monosaccharide-transporting ATPase YP_003308282.1 PFAM: oxidoreductase domain protein; KEGG: eca:ECA1398 oxidoreductase YP_003308285.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003308289.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sgl:SG1443 transcriptional regulator SlyA YP_003308290.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sat:SYN_01968 sodium driven multidrug efflux pump YP_003308291.1 KEGG: conserved hypothetical protein YP_003308294.1 KEGG: conserved hypothetical protein YP_003308295.1 PFAM: Sel1 domain protein repeat-containing protein; TPR repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: hiq:CGSHiGG_00130 Sel1 domain-containing protein YP_003308297.1 PFAM: Sel1 domain protein repeat-containing protein; TPR repeat-containing protein; hypothetical protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: gur:Gura_1985 Sel1 domain-containing protein YP_003308299.1 KEGG: wbr:WGLp265 hypothetical protein YP_003308300.1 KEGG: hypothetical protein YP_003308301.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tau:Tola_1492 iron-containing alcohol dehydrogenase YP_003308302.1 KEGG: dat:HRM2_34010 ATPase family protein YP_003308303.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: hypothetical protein YP_003308304.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003308305.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; binding-protein-dependent transporters inner membrane component; KEGG: cbs:COXBURSA331_A0267 quaternary amine ABC transporter periplasmic substrate-binding protein YP_003308306.1 KEGG: ses:SARI_01426 hypothetical protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter related; CBS domain containing protein; SMART: ATPase AAA; CBS domain containing protein YP_003308307.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: vha:VIBHAR_01087 hypothetical protein YP_003308308.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: sfr:Sfri_1898 iron-containing alcohol dehydrogenase YP_003308309.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecz:ECS88_1500 autotransported outer membrane protein involved in cell adhesion YP_003308311.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pin:Ping_0552 transcriptional regulator for galactose, periplasmic binding protein, LacI family protein YP_003308312.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein) YP_003308313.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ecm:EcSMS35_1813 alpha amylase family protein YP_003308314.1 PFAM: extracellular solute-binding protein family 1; KEGG: ent:Ent638_2164 extracellular solute-binding protein YP_003308315.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ecl:EcolC_2314 binding-protein-dependent transport systems inner membrane component YP_003308316.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: ecl:EcolC_2313 binding-protein-dependent transport systems inner membrane component YP_003308317.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: esa:ESA_01606 hypothetical protein YP_003308318.1 PFAM: xylose isomerase; KEGG: ecv:APECO1_467 transient receptor potential locus YP_003308319.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: ecg:E2348C_1507 predicted oxidoreductase, NADH-binding YP_003308320.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ses:SARI_01291 hypothetical protein YP_003308321.1 TIGRFAM: beta-phosphoglucomutase; beta- phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: nmc:NMC1776 beta-phosphoglucomutase YP_003308322.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ara:Arad_9959 glycerol trinitrate reductase protein YP_003308323.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: set:SEN3305 surface-exposed virulence protein BigA YP_003308324.1 KEGG: hypothetical protein YP_003308326.1 PFAM: Auxin Efflux Carrier; KEGG: vfi:VF_A1064 transporter YP_003308328.1 KEGG: conserved hypothetical protein YP_003308329.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: ccv:CCV52592_0290 acriflavine resistance protein YP_003308330.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: asa:ASA_0602 ABC-type glutamine/glutamate transporter ATP-binding protein YP_003308331.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: hhe:HH0346 hypothetical protein YP_003308332.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cco:CCC13826_0661 6,7-dimethyl-8- ribityllumazine synthase YP_003308333.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sat:SYN_03008 rrf2 family protein YP_003308335.1 KEGG: pca:Pcar_2380 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP- dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein YP_003308336.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: pca:Pcar_2933 glucosamine--fructose-6- phosphate aminotransferase, isomerizing YP_003308337.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: dat:HRM2_48140 Tkt1 YP_003308339.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; KEGG: similar to nephrocystin 3 YP_003308340.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: dat:HRM2_33950 hemolysin-III related protein YP_003308341.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: vco:VC0395_0002 glycerophosphodiester phosphodiesterase YP_003308342.1 KEGG: swd:Swoo_1440 hypothetical protein YP_003308343.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003308345.1 KEGG: dvl:Dvul_2495 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase YP_003308346.1 KEGG: gbm:Gbem_0764 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003308347.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; ExsB family protein; glutamine amidotransferase class-I; KEGG: amc:MADE_02972 GMP synthase YP_003308348.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: cff:CFF8240_0846 DNA-binding protein HU YP_003308349.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: tau:Tola_1492 iron-containing alcohol dehydrogenase YP_003308350.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: msu:MS1385 SoxR protein YP_003308351.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1 YP_003308352.1 PFAM: Barstar (barnase inhibitor); KEGG: plu:plu4062 hypothetical protein YP_003308353.1 PFAM: protein of unknown function DUF214; KEGG: gbm:Gbem_0837 lipoprotein releasing system, transmembrane protein, LolC/E family YP_003308354.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pmr:PMI0879 lipoprotein releasing system, ATP- binding protein YP_003308355.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: tmz:Tmz1t_0707 sigma 54 modulation protein/ribosomal protein S30EA YP_003308356.1 KEGG: azo:azo2623 hypothetical protein YP_003308357.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: gme:Gmet_3450 MarR family transcriptional regulator YP_003308358.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: mxa:MXAN_3230 hypothetical protein YP_003308359.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: pca:Pcar_1629 GTPases YP_003308360.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: gur:Gura_2860 rod shape-determining protein MreC YP_003308361.1 KEGG: CG12455 gene product from transcript CG12455- RA YP_003308362.1 TIGRFAM: DNA repair protein RecO; KEGG: dat:HRM2_28160 RecO YP_003308363.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vha:VIBHAR_05188 PTS system fructose-specific IIABC component YP_003308364.1 PFAM: ATP-cone domain protein; KEGG: dat:HRM2_31280 hypothetical protein YP_003308365.1 PFAM: protein of unknown function DUF368; KEGG: mmw:Mmwyl1_1306 hypothetical protein YP_003308366.1 PFAM: septum formation initiator; KEGG: psa:PST_1558 septum formation initiator YP_003308368.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: sun:SUN_0311 serine protease YP_003308370.1 PFAM: Domain of unknown function DUF1905 YP_003308371.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PP-loop domain protein; KEGG: pfl:PFL_3891 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase YP_003308372.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_0159 TetR family transcriptional regulator YP_003308373.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: hpp:HPP12_1149 integral membrane protein YP_003308374.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); PFAM: haloacid dehalogenase; KEGG: geo:Geob_0520 HAD-superfamily subfamily IB hydrolase, TIGR01490 YP_003308376.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: pmy:Pmen_1661 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003308377.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: dat:HRM2_12970 lysylphosphatidylglycerol synthetase (LPG synthetase) (multiple peptide resistance factor) YP_003308378.1 KEGG: aspartate--ammonia ligase ; K01914 aspartate--ammonia ligase; TIGRFAM: aspartate/ammonia ligase; PFAM: aspartate--ammonia ligase YP_003308381.1 TIGRFAM: outer membrane autotransporter barrel domain protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; KEGG: elf:LF82_p222 EntS EntS/YbdA MFS transporter YP_003308382.1 KEGG: tdn:Suden_0931 hypothetical protein YP_003308383.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: cha:CHAB381_0799 hypothetical protein YP_003308384.1 KEGG: afr:AFE_1218 hypothetical protein YP_003308385.1 KEGG: ank:AnaeK_3883 hypothetical protein YP_003308388.1 PFAM: toxic anion resistance family protein; KEGG: dno:DNO_0637 toxic anion resistance protein YP_003308390.1 PFAM: stress protein; KEGG: prw:PsycPRwf_0075 stress protein YP_003308391.1 KEGG: Ca2+-ATPase; TIGRFAM: calcium-translocating P-type ATPase, PMCA- type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase YP_003308392.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bgl:bglu_1g16940 hypothetical protein YP_003308393.1 PFAM: excinuclease ABC C subunit domain protein; SMART: excinuclease ABC C subunit domain protein; KEGG: sun:SUN_1130 hypothetical protein YP_003308394.1 KEGG: gur:Gura_1415 Holliday junction resolvase; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003308395.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: nam:NAMH_1254 RNA methyltransferase, TrmH family, group 2 YP_003308396.1 PFAM: lytic transglycosylase catalytic; KEGG: sde:Sde_1778 LolC/E family lipoprotein releasing system, transmembrane protein YP_003308397.1 PFAM: biotin and thiamin synthesis associated; radical SAM domain protein; KEGG: pca:Pcar_1631 thiamine biosynthesis protein ThiH YP_003308399.1 KEGG: bba:Bd3230 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase YP_003308400.1 PFAM: dihydrofolate reductase region; KEGG: fta:FTA_0239 dihydrofolate reductase type I YP_003308401.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_2422 TetR family transcriptional regulator YP_003308402.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: asu:Asuc_0583 transcriptional antiterminator, BglG YP_003308403.1 PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2007 glycoside hydrolase family protein YP_003308404.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ecq:ECED1_3805 galactosamine-6-phosphate isomerase YP_003308405.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: yen:YE0970 N, N'-diacetylchitobiose-specific PTS system transporter subunit IIA YP_003308406.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: vfm:VFMJ11_0618 BglE YP_003308407.1 PFAM: phosphotransferase system EIIC; KEGG: kpe:KPK_4794 PTS system, lactose/cellobiose family IIC component YP_003308408.1 KEGG: sde:Sde_2410 hypothetical protein YP_003308409.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: cha:CHAB381_1508 major facilitator superfamily permease YP_003308410.1 PFAM: protein of unknown function DUF374; KEGG: dal:Dalk_1795 protein of unknown function DUF374 YP_003308411.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase subunit beta; PFAM: tRNA synthetase class I (M); t-RNA-binding domain protein; KEGG: nis:NIS_0794 methionyl-tRNA synthetase YP_003308412.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: SLEI family protein YP_003308413.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: rms:RMA_0561 thiol:disulfide interchange protein TlpA YP_003308415.1 PFAM: protein of unknown function DUF1667; KEGG: sat:SYN_02448 hypothetical protein YP_003308416.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sat:SYN_02447 pyridine nucleotide-disulphide oxidoreductase family protein YP_003308417.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase YP_003308418.1 TIGRFAM: valyl-tRNA synthetase; KEGG: gur:Gura_1799 valyl-tRNA synthetase YP_003308419.1 PFAM: protein of unknown function DUF107; KEGG: rec:RHECIAT_CH0003812 hypothetical protein YP_003308420.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: sme:SMc04020 hypothetical protein YP_003308421.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: cak:Caul_4419 band 7 protein YP_003308422.1 PFAM: glutaredoxin; KEGG: lpc:LPC_2103 hypothetical protein YP_003308423.1 PFAM: CutC family protein; KEGG: bxe:Bxe_A4291 copper homeostasis protein CutC YP_003308425.1 KEGG: MAD1; Coiled-coil protein involved in the spindle-assembly checkpoint; phosphorylated by Mps1p upon checkpoint activation which leads to inhibition of the activity of the anaphase promoting complex; forms a complex with Mad2-TRUNCATED- YP_003308426.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: dal:Dalk_0541 nuclease (SNase domain protein) YP_003308427.1 KEGG: efe:EFER_3895 hypothetical protein YP_003308428.1 KEGG: sed:SeD_A4402 periplasmic protein YP_003308429.1 KEGG: mxa:MXAN_2887 hypothetical protein YP_003308430.1 KEGG: sdn:Sden_1971 hypothetical protein YP_003308431.1 KEGG: mxa:MXAN_2888 coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003308432.1 KEGG: mxa:MXAN_2889 radical SAM domain-containing protein YP_003308434.1 KEGG: smt:Smal_1014 hypothetical protein YP_003308435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abu:Abu_2153 phosphoglycolate phosphatase YP_003308436.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: psa:PST_0990 phosphotransferase system, fructose-specific IIBC component YP_003308437.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: tau:Tola_0444 PTS system, fructose-specific, IIB subunnit YP_003308438.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ecg:E2348C_3926 predicted fructose-specific PTS enzymes, IIA component YP_003308439.1 PFAM: ketose-bisphosphate aldolase class-II; KEGG: cko:CKO_03797 hypothetical protein YP_003308440.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gsu:GSU3176 LysM domain-containing protein YP_003308442.1 KEGG: hypothetical protein YP_003308443.1 KEGG: viral A-type inclusion protein ; K02331 DNA polymerase phi subunit YP_003308444.1 KEGG: hypothetical protein YP_003308447.1 KEGG: spe:Spro_1790 rhs element Vgr protein YP_003308450.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ppd:Ppro_1707 selenide, water dikinase YP_003308451.1 TIGRFAM: diaminopropionate ammonia-lyase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: dps:DP1388 diaminopropionate ammonia-lyase YP_003308452.1 TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: shl:Shal_0637 peptidase YP_003308453.1 TIGRFAM: carbamoyltransferase YgeW; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: ecl:EcolC_0838 carbamoyltransferase YgeW YP_003308454.1 KEGG: ecw:EcE24377A_3199 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003308456.1 TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: dps:DP1412 xanthine permease YP_003308457.1 TIGRFAM: uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: dps:DP1412 xanthine permease YP_003308458.1 PFAM: amidohydrolase; amidohydrolase; KEGG: bur:Bcep18194_A5267 hydroxydechloroatrazine ethylaminohydrolase YP_003308459.1 TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: reh:H16_A1007 nucleobase:cation symporter 2 (NCS2) family transporter YP_003308460.1 TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ecp:ECP_2872 selenate reductase subunit YgfK YP_003308461.1 TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; amidohydrolase; KEGG: Amidohydrolase family protein YP_003308462.1 TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sil:SPO0830 xanthine dehydrogenase family protein, small/large subunits YP_003308463.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: vfm:VFMJ11_0394 endoribonuclease L-PSP YP_003308464.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: dal:Dalk_4696 molybdenum cofactor synthesis domain protein YP_003308465.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: dps:DP2475 molybdopterin biosynthesis protein (MoeA) YP_003308466.1 KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; PFAM: aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase; SMART: aldehyde ferredoxin oxidoreductase YP_003308467.1 PFAM: thiamineS protein; KEGG: gme:Gmet_1044 thiamine S YP_003308468.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gur:Gura_1193 UBA/ThiF-type NAD/FAD binding protein YP_003308469.1 KEGG: rme:Rmet_0895 signal peptide protein YP_003308470.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: gur:Gura_3543 binding-protein-dependent transport systems inner membrane component YP_003308471.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: vpa:VP0982 lipid transporter ATP- binding/permease YP_003308472.1 KEGG: dps:DP2172 molybdenum cofactor biosynthesis protein A (MoaA); TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: radical SAM domain protein; molybdenum cofactor synthesis protein; SMART: Elongator protein 3/MiaB/NifB YP_003308473.1 TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; amidohydrolase; KEGG: shl:Shal_0638 phenylhydantoinase YP_003308474.1 KEGG: dps:DP3065 hypothetical protein YP_003308475.1 KEGG: dps:DP3064 hypothetical protein YP_003308476.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sat:SYN_02931 cytoplasmic protein YP_003308477.1 PFAM: molybdopterin binding domain; KEGG: dat:HRM2_07090 molybdopterin biosynthesis protein MoeA YP_003308478.1 KEGG: aminoacylase; K01436 aminoacylase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003308479.1 PFAM: MOSC domain containing protein; KEGG: pca:Pcar_1967 hypothetical protein YP_003308480.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mfa:Mfla_0199 GTP cyclohydrolase subunit MoaC YP_003308481.1 KEGG: sat:SYN_01296 cytoplasmic protein YP_003308482.1 KEGG: ccv:CCV52592_0874 (R)-2-hydroxyglutaryl-CoA dehydratase activator (2-hydroxyglutaryl-CoA dehydratase component A); TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_003308483.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: ccv:CCV52592_0873 2-hydroxyglutaryl-CoA dehydratase, D-component YP_003308484.1 TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: ecc:c3453 hypothetical protein YP_003308485.1 PFAM: protein of unknown function DUF182; KEGG: shl:Shal_0645 hypothetical protein YP_003308487.1 PFAM: PP-loop domain protein; KEGG: gme:Gmet_3336 PP-loop protein YP_003308489.1 KEGG: hypothetical protein YP_003308490.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gur:Gura_3463 cation diffusion facilitator family transporter YP_003308491.1 KEGG: yen:YE2815 galactose-binding protein YP_003308492.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ecy:ECSE_2416 methyl-galactoside ABC transporter ATP-binding component YP_003308493.1 PFAM: inner-membrane translocator; KEGG: msu:MS0641 beta-methylgalactoside transporter inner membrane component YP_003308495.1 KEGG: dal:Dalk_0722 methyltransferase small YP_003308496.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: pag:PLES_15431 dihydrofolate reductase YP_003308498.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: nam:NAMH_1464 histidinol phosphatase YP_003308499.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_0887 TetR family transcriptional regulator YP_003308501.1 PFAM: dihydrouridine synthase; KEGG: TIM-barrel protein, nifR3 family protein YP_003308502.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit beta; KEGG: gur:Gura_3279 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_003308503.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, subunit alpha; PFAM: acetyl-CoA carboxylase subunit alpha; KEGG: gme:Gmet_1216 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_003308504.1 KEGG: ppr:PBPRA0234 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_003308505.1 KEGG: vha:VIBHAR_00829 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_003308506.1 PFAM: nitroreductase; KEGG: gbm:Gbem_0507 hypothetical protein YP_003308507.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: abb:ABBFA_003333 lysozyme M1 precursor(1,4- beta-N-acetylmuramidase M1) YP_003308508.1 KEGG: pca:Pcar_0376 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; SMART: Toprim sub domain protein YP_003308509.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003308510.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: esa:ESA_00528 hypothetical protein YP_003308511.1 KEGG: msl:Msil_2450 hypothetical protein YP_003308512.1 PFAM: sulfatase; KEGG: hypothetical protein YP_003308513.1 PFAM: ROK family protein; KEGG: vfm:VFMJ11_A0543 protein mlc (making large colonies protein) YP_003308514.1 PFAM: protein of unknown function DUF81; KEGG: tdn:Suden_1164 hypothetical protein YP_003308516.1 KEGG: sse:Ssed_0873 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003308517.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase; KEGG: pmr:PMI1598 phosphatase YP_003308518.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003308519.1 PFAM: protein of unknown function DUF1622; KEGG: gur:Gura_1296 hypothetical protein YP_003308520.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: vfm:VFMJ11_2636 PTS system, mannitol YP_003308521.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003308522.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: hso:HS_1143 galactitol-specific PTS system component IIB YP_003308523.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: hsm:HSM_1034 PTS system, galactitol-specific IIC subunit YP_003308524.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: dat:HRM2_08650 PfkB1 YP_003308525.1 PFAM: class II aldolase/adducin family protein; KEGG: afw:Anae109_0362 class II aldolase/adducin family protein YP_003308527.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: aci:ACIAD3058 phosphocarrier protein (HPr- like) NPr, nitrogen related, exchanges phosphate with enzyme I YP_003308528.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecz:ECS88_1500 autotransported outer membrane protein involved in cell adhesion YP_003308529.1 KEGG: aci:ACIAD3581 hypothetical protein YP_003308530.1 PFAM: 67 kDa myosin-cross-reactive antigen family protein; KEGG: myosin-cross-reactive antigen YP_003308531.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; KEGG: ftn:FTN_0587 deoxyguanosinetriphosphate triphosphohydrolase YP_003308532.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: vfi:VF_2086 GTP-binding protein Era YP_003308533.1 KEGG: dat:HRM2_42750 hypothetical protein YP_003308534.1 KEGG: dat:HRM2_42760 two domain fusion protein (ParB-like nuclease domain/HTH-type transcriptional regulator) YP_003308535.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: aha:AHA_0035 Cof family hydrolase YP_003308536.1 KEGG: gur:Gura_2507 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; PFAM: DNA polymerase III subunit alpha; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003308537.1 KEGG: bav:BAV2997 biotin carboxyl carrier protein of acetyl-CoA carboxylase YP_003308538.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; carbamoyl- phosphate synthetase large chain domain protein; KEGG: gur:Gura_1826 acetyl-CoA carboxylase, biotin carboxylase YP_003308539.1 PFAM: protein of unknown function DUF322 YP_003308541.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: nam:NAMH_1802 transcription antitermination factor NusB YP_003308542.1 PFAM: stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; KEGG: sat:SYN_00230 response regulator receiver domain-containing protein YP_003308543.1 PFAM: Heavy metal transport/detoxification protein; KEGG: abu:Abu_0480 heavy-metal transporting P-type ATPase YP_003308545.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lpc:LPC_2301 hypothetical protein YP_003308546.1 PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rhi:NGR_c08790 AraC family transcriptional regulator YP_003308547.1 PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane YP_003308548.1 KEGG: aav:Aave_2499 hypothetical protein YP_003308549.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_02128 hypothetical protein YP_003308551.1 KEGG: gsu:GSU0489 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_003308554.1 KEGG: cco:CCC13826_0641 hypothetical protein YP_003308555.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRA1330 hypothetical protein YP_003308558.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lpc:LPC_2172 nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase YP_003308560.1 SMART: HhH-GPD family protein; KEGG: rec:RHECIAT_PB0000014 N- glycosylase/DNA lyase protein, HhH-GPD family YP_003308561.1 TIGRFAM: thioredoxin; PFAM: thioredoxin domain; glutaredoxin 2; KEGG: cff:CFF8240_0295 thioredoxin YP_003308562.1 PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transporter substrate-binding protein YP_003308563.1 PFAM: esterase; KEGG: bpy:Bphyt_5901 esterase YP_003308564.1 PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transporter substrate-binding protein YP_003308565.1 KEGG: hiq:CGSHiGG_05855 hypothetical protein YP_003308566.1 PFAM: radical SAM protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vvy:VV2062 pyruvate-formate lyase-activating enzyme YP_003308568.1 KEGG: conserved hypothetical protein YP_003308569.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003308570.1 KEGG: hypothetical protein YP_003308571.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMc02884 lipoprotein precursor YP_003308572.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; KEGG: purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase YP_003308573.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: ent:Ent638_3784 cAMP-regulatory protein YP_003308574.1 PFAM: cyclic nucleotide-binding; KEGG: plu:plu2771 hypothetical protein YP_003308575.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rlt:Rleg2_4171 ABC transporter YP_003308576.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003308577.1 PFAM: inner-membrane translocator; KEGG: cvi:CV_2350 sugar ABC transporter permease YP_003308578.1 KEGG: mxa:MXAN_5710 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003308579.1 KEGG: bba:Bd3854 hypothetical protein; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003308580.1 KEGG: pca:Pcar_2320 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: phosphopentomutase domain protein; metalloenzyme domain protein YP_003308581.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: apl:APL_1743 Ser/Thr protein phosphatase family protein YP_003308582.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: asa:ASA_3652 purine nucleoside phosphorylase YP_003308583.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: cytidine deaminase family protein; K01489 cytidine deaminase YP_003308585.1 PFAM: Na+/solute symporter; KEGG: dde:Dde_1268 sodium:solute symport protein YP_003308586.1 PFAM: protein of unknown function DUF1113; KEGG: dde:Dde_0966 metal dependent phosphohydrolase YP_003308588.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sml:Smlt1305 MerR family transcriptional regulator YP_003308589.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dal:Dalk_2553 MATE efflux family protein YP_003308592.1 PFAM: GCN5-related N-acetyltransferase; KEGG: smd:Smed_0820 GCN5-related N- acetyltransferase YP_003308593.1 KEGG: hpj:jhp0876 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003308594.1 PFAM: nucleotidyl transferase; KEGG: sat:SYN_01031 mannose-1-phosphate guanylyltransferase YP_003308595.1 KEGG: esa:ESA_01679 hypothetical protein; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003308596.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: gbm:Gbem_1752 cell wall hydrolase/autolysin YP_003308597.1 KEGG: lpp:lpp2473 hypothetical protein YP_003308598.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: amc:MADE_00100 thiol:disulfide interchange protein YP_003308599.1 PFAM: protein of unknown function DUF305; KEGG: cla:Cla_1571 conserved hypothetical protein (DUF305 domain protein) YP_003308600.1 KEGG: vco:VC0395_A2104 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein YP_003308601.1 PFAM: polysaccharide biosynthesis protein; KEGG: vsp:VS_0223 capsular polysaccharide repeating unit transporter CpsL YP_003308602.1 PFAM: glycosyl transferase family 2; KEGG: bbr:BB4029 glycosyl transferase YP_003308604.1 PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003308609.1 KEGG: nam:NAMH_0110 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003308610.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: geo:Geob_0753 tyrosine recombinase XerC YP_003308611.1 PFAM: GTP-binding protein HSR1-related; KEGG: hypothetical protein YP_003308612.1 KEGG: hypothetical protein YP_003308613.1 PFAM: peptidase M48 Ste24p; KEGG: sun:SUN_0605 zinc metallopeptidase YP_003308614.1 KEGG: sfu:Sfum_0514 outer membrane protein YP_003308615.1 KEGG: aha:AHA_2293 GAF domain-containing protein YP_003308616.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 transcriptional regulator YP_003308618.1 KEGG: ypy:YPK_0775 hypothetical protein YP_003308621.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abu:Abu_1136 hypothetical protein YP_003308622.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 outer membrane autotransporter barrel domain protein YP_003308623.1 TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter related; KEGG: geo:Geob_3812 excinuclease ABC subunit A YP_003308626.1 PFAM: protein of unknown function DUF503; KEGG: mxa:MXAN_2069 hypothetical protein YP_003308631.1 KEGG: ecm:EcSMS35_4832 hypothetical protein YP_003308632.1 PFAM: ThiJ/PfpI domain protein; KEGG: hypothetical protein LOC100162986 YP_003308633.1 KEGG: sil:SPO0961 hypothetical protein YP_003308634.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; phosphotransferase system EIIC; KEGG: sfv:SFV_3938 PTS system, mannitol-specific enzyme IIABC components YP_003308635.1 PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: ect:ECIAI39_4185 PTS system transcriptional antiterminator YP_003308636.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pin:Ping_0088 PTS system, mannitol-specific IIABC protein YP_003308637.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ppr:PBPRB0362 mannitol-1-phosphate 5- dehydrogenase YP_003308638.1 TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: stm:STM2755 hexulose 6 phosphate synthase YP_003308639.1 TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: seh:SeHA_C3252 3-hexulose-6-phosphate isomerase YP_003308640.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: vfm:VFMJ11_1266 1,3-propanediol dehydrogenase YP_003308641.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gme:Gmet_2630 ABC transporter-related protein YP_003308642.1 PFAM: PHP domain protein; KEGG: nam:NAMH_1464 histidinol phosphatase YP_003308643.1 PFAM: NUDIX hydrolase; KEGG: avi:Avi_1566 NTP pyrophosphohydrolase MutT family YP_003308644.1 KEGG: sat:SYN_01534 Mg/Co/Ni transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; SMART: CBS domain containing protein YP_003308647.1 PFAM: protein of unknown function DUF45; KEGG: tdn:Suden_0949 hypothetical protein YP_003308648.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: dat:HRM2_28550 PpiB1 YP_003308650.1 PFAM: helix-turn-helix protein YlxM/p13 family protein YP_003308651.1 KEGG: dvm:DvMF_2888 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_003308652.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: dal:Dalk_4649 ribosomal protein S16 YP_003308656.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: apj:APJL_2030 ubiquinone/menaquinone biosynthesis methyltransferase YP_003308657.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein YP_003308658.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: ypb:YPTS_2643 glutamine ABC transporter periplasmic protein YP_003308659.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dde:Dde_0167 amino acid ABC transporter permease YP_003308660.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: son:SO_1042 amino acid ABC transporter ATP- binding protein YP_003308661.1 PFAM: pentapeptide repeat protein; KEGG: pha:PSHAa1935 protein McbG YP_003308662.1 KEGG: hch:HCH_05472 hypothetical protein YP_003308663.1 PFAM: NUDIX hydrolase; KEGG: asu:Asuc_2046 NUDIX hydrolase YP_003308664.1 KEGG: hypothetical protein YP_003308667.1 KEGG: cff:CFF8240_1694 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003308668.1 KEGG: geo:Geob_0909 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; dihydroneopterin aldolase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK; dihydroneopterin aldolase YP_003308670.1 KEGG: mno:Mnod_5983 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003308671.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: dat:HRM2_17030 FolC YP_003308672.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5644 carbohydrate ABC transporter YP_003308673.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5645 carbohydrate ABC transporter YP_003308674.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: swd:Swoo_1190 AraC family transcriptional regulator YP_003308675.1 KEGG: bam:Bamb_4312 hypothetical protein YP_003308676.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: pin:Ping_1491 phosphoesterase, PA-phosphatase related YP_003308679.1 KEGG: hsm:HSM_0336 hypothetical protein YP_003308680.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_0707 transcriptional regulator YP_003308681.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_2589 sensor histidine kinase YP_003308682.1 PFAM: purine or other phosphorylase family 1; KEGG: vpa:VPA1089 5'-methylthioadenosine/S- adenosylhomocy steine nuclosidase YP_003308688.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: atc:AGR_C_1309 hypothetical protein YP_003308690.1 PFAM: protein of unknown function DUF488; KEGG: hypothetical protein YP_003308691.1 KEGG: sat:SYN_00234 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: semialdehyde dehydrogenase NAD - binding; semialdehyde dehydrogenase dimerisation region YP_003308692.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mms:mma_2445 phosphinothricin N- acetyltransferase YP_003308693.1 KEGG: geo:Geob_3086 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_003308694.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: tbd:Tbd_2686 N-acetylglutamate kinase YP_003308695.1 KEGG: sat:SYN_02155 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_003308696.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: vvu:VV1_1466 ornithine carbamoyltransferase YP_003308697.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003308700.1 KEGG: cco:CCC13826_0641 hypothetical protein YP_003308701.1 PFAM: PfkB domain protein; KEGG: slo:Shew_2725 ribokinase-like domain- containing protein YP_003308702.1 PFAM: indigoidine synthase A family protein; KEGG: slo:Shew_2724 indigoidine synthase A family protein YP_003308703.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: dps:DP3033 propanediol utilization protein (PduS) YP_003308704.1 PFAM: microcompartments protein; KEGG: maq:Maqu_1244 microcompartments protein YP_003308705.1 PFAM: regulatory protein TetR; KEGG: dat:HRM2_40370 HTH-type transcriptional regulator (MtrR family protein) YP_003308706.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_01009 calcium-transporting ATPase YP_003308707.1 KEGG: gbm:Gbem_0693 hypothetical protein YP_003308708.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: dal:Dalk_4742 ribosomal protein S15 YP_003308709.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xop:PXO_00641 phosphinothricin N- acetyltransferase YP_003308710.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: pha:PSHAa2154 efflux pump YP_003308711.1 PFAM: GCN5-related N-acetyltransferase; KEGG: abu:Abu_1737 acetyltransferase YP_003308715.1 PFAM: protein of unknown function DUF344; KEGG: gme:Gmet_1092 polyphosphate:AMP phosphotransferase YP_003308716.1 KEGG: dol:Dole_1936 DNA repair photolyase-like protein YP_003308717.1 PFAM: DNA polymerase III delta; KEGG: sat:SYN_01765 DNA polymerase III, subunit delta YP_003308718.1 KEGG: hso:HS_0374 hypothetical protein YP_003308719.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: pha:PSHAa0914 30S ribosomal subunit protein S20 YP_003308720.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsp:VS_II0605 PTS family enzyme IIA YP_003308721.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: cko:CKO_03045 fructose-like permease EIIC subunit 2 YP_003308722.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: ecl:EcolC_4066 PTS system, fructose-specific, IIB subunnit YP_003308723.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: ecd:ECDH10B_1908 DNA-binding transcriptional regulator YP_003308724.1 KEGG: tau:Tola_1902 pyruvate formate-lyase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003308725.1 KEGG: tau:Tola_1901 glycyl-radical enzyme activating protein family; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein YP_003308726.1 PFAM: transaldolase; KEGG: tau:Tola_1893 transaldolase YP_003308728.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003308729.1 SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicase; KEGG: gur:Gura_4122 helicase C2 YP_003308730.1 KEGG: sat:SYN_02793 metal-dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; SMART: metal-dependent phosphohydrolase HD region YP_003308731.1 PFAM: protein of unknown function UPF0054; KEGG: sun:SUN_1265 metalloprotease YP_003308732.1 PFAM: diacylglycerol kinase; phosphoesterase PA- phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: gme:Gmet_2369 phosphoesterase, PA-phosphatase related YP_003308733.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: pin:Ping_1827 manganese-dependent inorganic pyrophosphatase YP_003308734.1 PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: vsa:VSAL_II0253 3-hydroxy-3- methylglutaryl coenzyme a reductase YP_003308735.1 PFAM: UbiA prenyltransferase; KEGG: plu:plu4506 prenyltransferase YP_003308736.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: bba:Bd3153 phosphoenolpyruvate synthase YP_003308737.1 KEGG: atc:AGR_C_3843 hypothetical protein YP_003308738.1 PFAM: phosphatidate cytidylyltransferase; KEGG: hypothetical protein YP_003308739.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sfu:Sfum_2230 hypothetical protein YP_003308740.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bba:Bd3151 AMP-ligase YP_003308741.1 KEGG: wsu:WS1766 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_003308742.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: nis:NIS_0837 fumarate/tartrate hydratase subunit beta YP_003308743.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: malic enzyme YP_003308744.1 KEGG: ecx:EcHS_A2555 WGR domain-containing protein YP_003308745.1 SMART: ankyrin; KEGG: smd:Smed_3569 ankyrin YP_003308746.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ecc:c0577 maltose O-acetyltransferase YP_003308748.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pmr:PMI2983 phosphosugar isomerase/binding protein YP_003308749.1 PFAM: pirin; Cupin 2 conserved barrel domain protein; KEGG: abu:Abu_0139 pirin YP_003308750.1 PFAM: protein of unknown function DUF896 YP_003308751.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: stm:STM3254 fructose-1-phosphate kinase YP_003308752.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIsubunit beta; phosphotransferase system EIIC; KEGG: stm:STM3255 phosphotransferase system fructose-specific component IIB YP_003308753.1 KEGG: vvy:VVA1509 tagatose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003308754.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsp:VS_II1320 PTS system, fructose-specific IIABC component YP_003308755.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: tdn:Suden_1866 histidinol phosphate phosphatase, HisJ YP_003308756.1 KEGG: conserved hypothetical protein YP_003308757.1 KEGG: sse:Ssed_1322 glutaconyl-CoA decarboxylase YP_003308760.1 KEGG: hypothetical protein YP_003308761.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: gsu:GSU2787 LysR family transcriptional regulator YP_003308762.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_1037 ABC transporter YP_003308763.1 PFAM: cobalamin synthesis protein P47K; KEGG: glo:Glov_1036 cobalamin synthesis protein P47K YP_003308764.1 PFAM: Domain of unknown function DUF1858; KEGG: glo:Glov_1035 domain of unknown function DUF1858 YP_003308765.1 KEGG: gsu:GSU1593 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; polynucleotide phosphorylase, phosphorolytic RNA- binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_003308766.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: lip:LI0373 phosphatidylglycerophosphate synthase YP_003308767.1 PFAM: protein of unknown function YGGT; KEGG: hha:Hhal_0947 protein of unknown function YGGT YP_003308768.1 PFAM: transcriptional regulator TrmB; KEGG: vsp:VS_2595 hypothetical protein YP_003308769.1 KEGG: gsu:GSU2066 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003308770.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: sfu:Sfum_3462 MraZ protein YP_003308771.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: geo:Geob_0772 S-adenosyl-methyltransferase MraW YP_003308773.1 PFAM: esterase; KEGG: bpy:Bphyt_5901 esterase YP_003308774.1 KEGG: nis:NIS_1768 N-acetyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003308775.1 KEGG: tau:Tola_2631 RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase YP_003308776.1 PFAM: sugar-binding domain protein; KEGG: yen:YE0815 transcriptional regulatory protein YP_003308777.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpe:KPK_5267 sorbitol-6-phosphate 2- dehydrogenase YP_003308778.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: yen:YE0814 sorbose-specific PTS uptake system component YP_003308779.1 KEGG: yen:YE0813 sorbose-specific PTS uptake system component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component YP_003308780.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: kpe:KPK_5270 sorbose permease IIC component YP_003308781.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: yen:YE0811 sorbose-specific PTS uptake system, component YP_003308782.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: yen:YE0810 L-sorbose 1-phosphate reductase YP_003308783.1 KEGG: bpy:Bphyt_5572 hypothetical protein YP_003308784.1 PFAM: transcription activator effector binding; KEGG: cbd:CBUD_A0019 DNA-binding protein YP_003308785.1 PFAM: protein of unknown function DUF205; KEGG: pca:Pcar_0651 hypothetical protein YP_003308786.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dal:Dalk_0486 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_003308787.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; KEGG: nis:NIS_0724 RNA polymerase sigma factor RpoD YP_003308788.1 KEGG: ech:ECH_1009 DNA polymerase III beta subunit; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003308789.1 KEGG: sde:Sde_1836 hypothetical protein YP_003308791.1 KEGG: sat:SYN_00163 DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: ATPase AAA YP_003308792.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: wri:WRi_006250 ribosomal protein L9 YP_003308793.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; KEGG: sat:SYN_00640 replicative DNA helicase YP_003308794.1 PFAM: peptidase U32; KEGG: geo:Geob_1554 peptidase U32 YP_003308795.1 PFAM: protein of unknown function DUF479; KEGG: apa:APP7_1254 hypothetical protein YP_003308796.1 KEGG: hypothetical protein YP_003308797.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase YP_003308798.1 TIGRFAM:radical SAM protein; PFAM: radical SAM domain protein; KEGG: hypothetical protein YP_003308799.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003308800.1 KEGG: xau:Xaut_1196 transglycosylase YP_003308801.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmr:PMI2916 acetyltransferase YP_003308802.1 KEGG: cvi:CV_3302 transcriptional repressor of the trehalose operon; TIGRFAM: trehalose operon repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_003308803.1 KEGG: uracil-DNA glycosylase ; K03648 uracil-DNA glycosylase YP_003308804.1 KEGG: conserved hypothetical protein YP_003308805.1 KEGG: vfm:VFMJ11_0072 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2 YP_003308806.1 PFAM: GCN5-related N-acetyltransferase; KEGG: amc:MADE_02345 ElaA protein YP_003308807.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01582 acyltransferase YP_003308808.1 PFAM: Auxin Efflux Carrier; KEGG: tau:Tola_0467 auxin efflux carrier YP_003308809.1 PFAM: fructose-16-bisphosphatase; KEGG: dat:HRM2_08610 Fbp1 YP_003308810.1 PFAM: K potassium transporter; KEGG: mlo:mll1417 potassium uptake protein Kup YP_003308811.1 PFAM: protein of unknown function DUF218; KEGG: vsa:VSAL_I1272 vancomycin resistance protein SanA YP_003308813.1 PFAM: protein of unknown function DUF199 YP_003308814.1 KEGG: dat:HRM2_18110 LpxK; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_003308816.1 KEGG: pca:Pcar_2578 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003308817.1 KEGG: geo:Geob_1192 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like YP_003308818.1 KEGG: pcr:Pcryo_0423 hypothetical protein YP_003308819.1 KEGG: pca:Pcar_2253 fructose-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003308820.1 PFAM: tyrosine phosphatase; Dual specificity protein phosphatase; KEGG: bur:Bcep18194_B0552 protein tyrosine/serine phosphatase YP_003308821.1 KEGG: dat:HRM2_26840 PyrG; TIGRFAM: CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003308822.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: spl:Spea_1995 phosphotransferase system, phosphocarrier protein HPr YP_003308823.1 KEGG: hypothetical LOC584527 YP_003308824.1 KEGG: dde:Dde_3031 hypothetical protein YP_003308825.1 KEGG: sit:TM1040_0517 hypothetical protein YP_003308826.1 KEGG: pmu:PM1543 hypothetical protein YP_003308827.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: nam:NAMH_0233 fibronectin/fibrinogen-binding protein YP_003308828.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: vpa:VPA1286 transcriptional regulator YP_003308829.1 KEGG: gme:Gmet_0067 ribulose-5-phosphate 3- epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'- phosphate decarboxylase YP_003308830.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: nis:NIS_0125 ribosome-associated GTPase YP_003308831.1 PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; KEGG: dol:Dole_2230 PASTA domain-containing protein YP_003308832.1 KEGG: spe:Spro_3998 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003308833.1 KEGG: tcx:Tcr_1657 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: ribosomal RNA adenine methylase transferase YP_003308835.1 PFAM: thioesterase superfamily protein; KEGG: dvm:DvMF_1421 thioesterase superfamily protein YP_003308836.1 KEGG: sfu:Sfum_0021 hypothetical protein YP_003308837.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; RimM protein; KEGG: gur:Gura_3761 16S rRNA processing protein RimM YP_003308838.1 KEGG: bas:BUsg383 tRNA (guanine-N1)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003308839.1 KEGG: pat:Patl_2042 hexapaptide repeat-containing transferase YP_003308840.1 KEGG: gsu:GSU0647 hypothetical protein YP_003308841.1 KEGG: pfo:Pfl01_1947 hypothetical protein YP_003308842.1 KEGG: dvm:DvMF_2582 dihydroxyacetone kinase subunit DhaK; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_003308843.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: mfa:Mfla_1105 dihydroxyacetone kinase, subunit L YP_003308844.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: elf:LF82_p722 phosphoenolpyruvate-protein phosphoryltransferase PptE YP_003308845.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: asa:ASA_2710 glycerol kinase YP_003308847.1 KEGG: ecp:ECP_4579 hypothetical protein YP_003308848.1 KEGG: vei:Veis_4662 hypothetical protein YP_003308849.1 PFAM: protein of unknown function DUF77; KEGG: vfi:VF_1442 hypothetical protein YP_003308850.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: mlo:mlr6798 ABC transporter permease YP_003308851.1 PFAM: NMT1/THI5 like domain protein; KEGG: prw:PsycPRwf_1444 NMT1/THI5-like protein YP_003308852.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: azc:AZC_2445 ABC transporter ATP-binding protein YP_003308853.1 PFAM: TatD-related deoxyribonuclease; KEGG: apl:APL_0278 Mg-dependent deoxyribonuclease YP_003308854.1 PFAM: ABC transporter; protein of unknown function RIO1; KEGG: pca:Pcar_2342 ubiquinone biosynthesis protein AarF YP_003308855.1 KEGG: ank:AnaeK_3866 hypothetical protein YP_003308856.1 PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: dde:Dde_3034 L-serine ammonia-lyase YP_003308857.1 KEGG: conserved hypothetical protein YP_003308858.1 TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: asu:Asuc_1346 RND family efflux transporter MFP subunit YP_003308859.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_4199 macrolide efflux ABC transporter ATP-binding protein YP_003308860.1 PFAM: protein of unknown function DUF214; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein YP_003308861.1 PFAM: oxidoreductase domain protein; KEGG: tau:Tola_1888 oxidoreductase domain protein YP_003308863.1 PFAM: protein of unknown function DUF554; KEGG: dat:HRM2_02860 hypothetical protein YP_003308864.1 PFAM: fumarylacetoacetate hydrolase; KEGG: cha:CHAB381_0853 fumarylacetoacetate hydrolase family protein YP_003308865.1 KEGG: ppd:Ppro_0609 radical SAM protein; TIGRFAM: conserved hypothetical protein; PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB YP_003308866.1 KEGG: hypothetical protein YP_003308867.1 KEGG: bph:Bphy_2061 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_003308868.1 PFAM: NUDIX hydrolase; KEGG: abu:Abu_1635 phosphohydrolase (MutT/NUDIX family protein) YP_003308870.1 KEGG: helicase YP_003308871.1 KEGG: hypothetical protein YP_003308872.1 KEGG: hypothetical protein YP_003308873.1 KEGG: mxa:MXAN_5969 hypothetical protein YP_003308875.1 KEGG: gbm:Gbem_3092 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III subunit alpha; DNA polymerase III subunit epsilon; PFAM: DNA polymerase III subunit alpha; exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: exonuclease; phosphoesterase PHP domain protein YP_003308877.1 PFAM: ribose/galactose isomerase; KEGG: gur:Gura_1880 RpiB/LacA/LacB family sugar- phosphate isomerase YP_003308878.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase; KEGG: ecc:c5096 ribose-5-phosphate isomerase B YP_003308879.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: tau:Tola_1975 RpiR family transcriptional regulator YP_003308880.1 PFAM: sulfatase; KEGG: rlt:Rleg2_6093 sulfatase YP_003308881.1 PFAM: PTS system fructose subfamily IIA component; KEGG: dvm:DvMF_0423 PTS system fructose subfamily IIA component YP_003308882.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: bpn:BPEN_459 PTS family enzyme IIA/enzyme IIB, mannose-specific YP_003308883.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: vvy:VV0538 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_003308884.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: apa:APP7_1444 mannose-specific PTS system protein IID YP_003308885.1 PFAM: sulfatase; KEGG: swd:Swoo_3655 sulfatase YP_003308886.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: hap:HAPS_1173 arylsulfatase regulator (Fe-S oxidoreductase) YP_003308887.1 PFAM: protein of unknown function DUF81; KEGG: cha:CHAB381_0722 inner membrane protein YfcA YP_003308888.1 KEGG: eum:ECUMN_1661 hypothetical protein YP_003308890.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: pmr:PMI0670 formate--tetrahydrofolate ligase YP_003308891.1 KEGG: dno:DNO_1110 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein YP_003308892.1 KEGG: Os01g0199900; hypothetical protein ; K11808 phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003308893.1 KEGG: dno:DNO_1112 phosphoribosylaminoimidazole- succinocarboxamidesynthase; TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003308894.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: gbm:Gbem_2329 amidophosphoribosyltransferase YP_003308895.1 KEGG: dno:DNO_1113 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003308896.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase; KEGG: dno:DNO_0207 phosphoribosylglycinamide formyltransferase YP_003308897.1 KEGG: har:HEAR0255 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_003308898.1 KEGG: dno:DNO_0940 phosphoribosylglycinamide synthetase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201 YP_003308899.1 KEGG: hsm:HSM_1780 hypothetical protein YP_003308901.1 KEGG: CG7924 gene product from transcript CG7924-RA YP_003308902.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: abu:Abu_1113 hypothetical protein YP_003308903.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bbr:BB2797 amino acid ABC transporter substrate-binding protein YP_003308904.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cti:RALTA_A2761 binding-protein- dependent transporter inner membrane component YP_003308905.1 PFAM: ABC transporter; SMC domain protein; SMART: ATPase AAA; KEGG: lip:LI0127 ABC-type polar amino acid transporter, ATPase component YP_003308906.1 PFAM: peptidase M23; KEGG: hac:Hac_0297 ToxR-activated gene YP_003308907.1 PFAM: protein of unknown function DUF583; KEGG: nam:NAMH_1534 hypothetical protein YP_003308908.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hhe:HH0716 hypothetical protein YP_003308909.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cff:CFF8240_0968 D-methionine transporter permease MetI YP_003308910.1 PFAM: NLPA lipoprotein; KEGG: pag:PLES_59011 TonB-dependent receptor YP_003308911.1 PFAM: NLPA lipoprotein; KEGG: pag:PLES_59011 TonB-dependent receptor YP_003308912.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein YP_003308913.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: hac:Hac_1159 translation initiation factor IF- 2 YP_003308914.1 KEGG: hypothetical protein YP_003308915.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: Bartomin ; K03529 chromosome segregation protein YP_003308916.1 KEGG: pca:Pcar_1774 hypothetical protein YP_003308917.1 PFAM: VacJ family lipoprotein; KEGG: psa:PST_1428 lipoprotein YP_003308918.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003308919.1 KEGG: vha:VIBHAR_01335 N-acetylglucosamine-6- phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003308920.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ppr:PBPRB0360 glucosamine-6-phosphate deaminase YP_003308921.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: pmu:PM1577 hypothetical protein YP_003308922.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: kpe:KPK_3873 PTS system, N-acetylglucosamine- specific IIBC component YP_003308924.1 KEGG: tau:Tola_0451 PTS system, lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003308925.1 PFAM: protein of unknown function DUF871 YP_003308926.1 PFAM: protein of unknown function DUF218; KEGG: vpa:VPA1680 hypothetical protein YP_003308927.1 PFAM: Chromate transporter; KEGG: geo:Geob_1961 chromate transporter YP_003308928.1 PFAM: Chromate transporter; KEGG: geo:Geob_1960 chromate transporter YP_003308929.1 PFAM: nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: net:Neut_1292 glucose-1-phosphate adenylyltransferase YP_003308930.1 KEGG: gur:Gura_0858 glycogen/starch synthase, ADP- glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1 YP_003308932.1 PFAM: peptidase S24 and S26 domain protein; KEGG: msl:Msil_1953 XRE family transcriptional regulator YP_003308933.1 KEGG: vfm:VFMJ11_2290 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003308934.1 KEGG: glo:Glov_3251 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003308935.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: ADL; adenylosuccinate lyase; K01756 adenylosuccinate lyase YP_003308936.1 KEGG: prw:PsycPRwf_1162 hypothetical protein YP_003308937.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: avi:Avi_1264 hypothetical protein YP_003308938.1 TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: dal:Dalk_3952 aconitate hydratase YP_003308939.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: aha:AHA_1152 isocitrate dehydrogenase YP_003308940.1 PFAM: citrate synthase; KEGG: noc:Noc_2628 methylcitrate synthase YP_003308941.1 PFAM: phosphoglycerate mutase; KEGG: rpi:Rpic_0374 phosphoglycerate mutase YP_003308942.1 PFAM: protein of unknown function DUF218; KEGG: prw:PsycPRwf_1021 hypothetical protein YP_003308943.1 PFAM: silent information regulator protein Sir2; KEGG: Sir2 family transcriptional regulator YP_003308944.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dol:Dole_2054 hypothetical protein YP_003308946.1 PFAM: protein of unknown function DUF523; KEGG: cco:CCC13826_1078 purine nucleoside phosphorylase YP_003308947.1 PFAM: cupin; KEGG: dds:Ddes_0206 cupin 2 conserved barrel domain protein YP_003308950.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nme:NMB1280 very long chain acyl-CoA dehydrogenase-related protein YP_003308951.1 PFAM: MOSC domain containing protein; KEGG: bph:Bphy_3061 MOSC domain-containing protein YP_003308952.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: rme:Rmet_1844 Appr-1-p processing YP_003308953.1 KEGG: hiq:CGSHiGG_06340 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 YP_003308954.1 KEGG: sat:SYN_01255 O-acetyl-L-homoserine sulfhydrolase / O-acetyl-L-serine sulfhydrolase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003308955.1 KEGG: cju:C8J_1146 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003308956.1 PFAM: homoserine O-succinyltransferase; KEGG: atc:AGR_C_4927 homoserine O- succinyltransferase YP_003308958.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: gbm:Gbem_0553 histidyl-tRNA synthetase YP_003308959.1 KEGG: gme:Gmet_0383 ATP phosphoribosyltransferase catalytic subunit; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_003308960.1 KEGG: gme:Gmet_0384 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: histidinol dehydrogenase YP_003308961.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: mmw:Mmwyl1_1133 histidinol-phosphate aminotransferase YP_003308962.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: azc:AZC_4502 imidazoleglycerol-phosphate dehydratase YP_003308963.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: cff:CFF8240_1352 imidazole glycerol phosphate synthase subunit HisH YP_003308964.1 KEGG: cco:CCC13826_0444 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_003308965.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: abu:Abu_0054 imidazole glycerol phosphate synthase subunit HisF YP_003308966.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: nis:NIS_1544 histidine biosynthesis bifunctional protein HisI YP_003308967.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: abu:Abu_1904 histidinol-phosphate phosphatase YP_003308968.1 TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; KEGG: hiq:CGSHiGG_01915 pyridoxal biosynthesis lyase PdxS YP_003308969.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: hiq:CGSHiGG_01920 glutamine amidotransferase subunit PdxT YP_003308970.1 KEGG: sml:Smlt3468 transmembrane protein YP_003308971.1 PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: dde:Dde_3099 methylated-DNA--protein-cysteine methyltransferase YP_003308972.1 KEGG: vfm:VFMJ11_0497 acetyltransferase, GNAT family YP_003308973.1 PFAM: chloride channel core; TrkA-C domain protein; KEGG: fph:Fphi_0870 chloride channel protein YP_003308974.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: riboflavin kinase; FAD synthetase; KEGG: gsu:GSU1487 riboflavin biosynthesis protein RibF YP_003308975.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: gme:Gmet_1959 condensin subunit ScpA YP_003308976.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: sat:SYN_00104 virulence factor protein YP_003308978.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nam:NAMH_0761 transcriptional regulator YP_003308979.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: msu:MS2196 MscL protein YP_003308980.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: geo:Geob_3286 GTP-binding protein LepA YP_003308981.1 PFAM: protein of unknown function DUF980; KEGG: son:SO_3335 hypothetical protein YP_003308982.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: rco:RC0086 soj protein YP_003308983.1 KEGG: viral A-type inclusion protein YP_003308984.1 KEGG: Zinc finger in N-recognin family protein YP_003308986.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: gur:Gura_0193 sun protein YP_003308987.1 TIGRFAM: metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; NUDIX hydrolase; KEGG: scl:sce1090 hypothetical protein YP_003308989.1 KEGG: nis:NIS_0286 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase; SMART: AP endonuclease family 2 YP_003308990.1 PFAM: type III restriction protein res subunit; helicase domain protein; DEAD/DEAH box helicase; SMART: DEAD-like helicase ; helicase; KEGG: abu:Abu_0181 DNA/RNA helicase YP_003308991.1 PFAM: protein of unknown function UPF0126; KEGG: swd:Swoo_1214 hypothetical protein YP_003308992.1 PFAM: Ppx/GppA phosphatase; KEGG: ppd:Ppro_1779 Ppx/GppA phosphatase YP_003308993.1 KEGG: hypothetical protein YP_003308994.1 KEGG: ribose 5-phosphate isomerase B family protein ; K01808 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase YP_003308995.1 PFAM: histidine triad (HIT) protein; KEGG: msu:MS0399 Hit protein YP_003308996.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: bhe:BH00110 tRNA/rRNA methyltransferase YP_003308997.1 KEGG: CCAAT-box DNA binding protein subunit B YP_003309000.1 KEGG: conserved hypothetical protein YP_003309001.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: SLEI family protein YP_003309003.1 PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein YP_003309004.1 KEGG: cja:CJA_1194 DGPF domain family YP_003309005.1 KEGG: conserved hypothetical protein YP_003309007.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_4700 glyoxalase/bleomycin resistance protein/dioxygenase YP_003309009.1 KEGG: hypothetical protein YP_003309011.1 KEGG: rme:Rmet_5016 hypothetical protein YP_003309013.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pla:Plav_1588 glyoxalase/bleomycin resistance protein/dioxygenase YP_003309017.1 KEGG: hsm:HSM_1780 hypothetical protein YP_003309018.1 KEGG: hypothetical protein YP_003309020.1 PFAM: protein of unknown function DUF1696; KEGG: pfs:PFLU5102 hypothetical protein YP_003309021.1 KEGG: similar to conserved hypothetical protein YP_003309023.1 PFAM: aminotransferase class I and II; KEGG: ftn:FTN_0410 aspartate aminotransferase YP_003309024.1 KEGG: pcr:Pcryo_0212 negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003309025.1 KEGG: hypothetical protein YP_003309028.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: psp:PSPPH_1337 hypothetical protein YP_003309029.1 KEGG: shl:Shal_1787 hypothetical protein YP_003309030.1 KEGG: sil:SPO1999 hypothetical protein YP_003309031.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003309032.1 KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003309034.1 KEGG: abu:Abu_0950 hypothetical protein YP_003309035.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ppd:Ppro_3036 UBA/ThiF-type NAD/FAD binding protein YP_003309036.1 KEGG: ppr:PBPRA2200 hypothetical protein YP_003309037.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: dvm:DvMF_1055 Mg2 transporter protein CorA family protein YP_003309038.1 PFAM: phosphoglycerate mutase; KEGG: pmu:PM0634 hypothetical protein YP_003309039.1 KEGG: dal:Dalk_0746 hypothetical protein YP_003309040.1 PFAM: protein of unknown function DUF541; KEGG: pzu:PHZ_c1597 hypothetical protein YP_003309043.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (uracil-5)-methyltransferase; KEGG: RNA methyltransferase ; K00599 YP_003309044.1 KEGG: hsm:HSM_1841 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: methionine sulfoxide reductase A YP_003309045.1 PFAM: protein of unknown function UPF0047; KEGG: pca:Pcar_0621 hypothetical protein YP_003309046.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; KEGG: fph:Fphi_1450 haloacid dehalogenase-like hydrolase YP_003309047.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: seh:SeHA_C0631 purine permease YbbY YP_003309048.1 PFAM: peptidase M16 domain protein; KEGG: gsu:GSU0927 M16 family peptidase YP_003309049.1 PFAM: rubrerythrin; KEGG: glo:Glov_1797 rubrerythrin YP_003309051.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: abu:Abu_1393 HAD-superfamily hydrolase YP_003309052.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: abu:Abu_1393 HAD-superfamily hydrolase YP_003309053.1 KEGG: nis:NIS_1040 threonine synthase; TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta YP_003309054.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pca:Pcar_2418 argininosuccinate lyase YP_003309055.1 KEGG: argininosuccinate synthase; K01940 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003309056.1 KEGG: sun:SUN_0814 hypothetical protein YP_003309057.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: ecc:c1269 hypothetical protein YP_003309058.1 KEGG: abc:ACICU_03141 phospholipase D endonuclease domain-containing protein YP_003309059.1 SMART: deoxyribonuclease I-like; KEGG: noc:Noc_A0008 endonuclease/exonuclease/phosphatase YP_003309060.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; KEGG: bav:BAV2518 elongation factor P YP_003309063.1 PFAM: protein of unknown function DUF1294; KEGG: apa:APP7_1150 hypothetical protein YP_003309064.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ara:Arad_9869 nitrate/sulfonate ABC transporter YP_003309065.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: abu:Abu_1996 ABC transporter permease YP_003309066.1 KEGG: nis:NIS_1591 sulfonate/nitrate ABC transporter substrate-binding protein YP_003309067.1 KEGG: tgr:Tgr7_1112 hypothetical protein YP_003309068.1 PFAM: major facilitator superfamily MFS_1; nucleoside:H symporter; KEGG: spl:Spea_2587 major facilitator transporter YP_003309070.1 KEGG: TPR Domain containing protein YP_003309071.1 PFAM: peptidase U32; KEGG: glo:Glov_0370 peptidase U32 YP_003309073.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase YP_003309075.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: sml:Smlt1009 glycine-rich autotransporter protein YP_003309076.1 PFAM: methyladenine glycosylase; KEGG: vsa:VSAL_II0794 DNA-3-methyladenine glycosylase I YP_003309077.1 PFAM: radical SAM protein; KEGG: dde:Dde_0047 elongator protein 3/MiaB/NifB YP_003309078.1 PFAM: transcription activator effector binding; KEGG: hch:HCH_03043 hypothetical protein YP_003309079.1 KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003309080.1 KEGG: hypothetical protein YP_003309081.1 PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hch:HCH_00194 transcriptional regulator YP_003309085.1 KEGG: dol:Dole_3236 siroheme synthase YP_003309086.1 KEGG: sun:SUN_1004 hypothetical protein YP_003309087.1 PFAM: GTP-binding protein HSR1-related; KEGG: geo:Geob_0537 small GTP-binding protein domain protein YP_003309088.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dat:HRM2_23010 GlnQ5 YP_003309089.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dps:DP1983 glutamine ABC-transporter permease (GlnP) YP_003309090.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: cju:C8J_0701 CjaC YP_003309091.1 KEGG: eca:ECA4434 PTS system, IIBC component; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003309092.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: ecv:APECO1_1713 hypothetical protein YP_003309093.1 PFAM: beta-lactamase; KEGG: reu:Reut_A3379 beta-lactamase-like YP_003309094.1 PFAM: regulatory protein TetR; KEGG: gbm:Gbem_2371 TetR family transcriptional regulator YP_003309095.1 KEGG: mxa:MXAN_2017 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATPase AAA; peptidase S16 lon domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16; ATPase AAA YP_003309096.1 KEGG: mxa:MXAN_2015 ATP-dependent protease ATP- binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; SMART: ATPase AAA YP_003309097.1 KEGG: nis:NIS_0165 ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_003309098.1 TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; KEGG: pca:Pcar_1690 trigger factor YP_003309099.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gsu:GSU2614 single-stranded-DNA-specific exonuclease RecJ YP_003309100.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: bap:BUAP5A_369 ribosome-binding factor A YP_003309101.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Miro domain protein; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; KEGG: gme:Gmet_1586 translation initiation factor IF-2 YP_003309102.1 PFAM: protein of unknown function DUF448; KEGG: gur:Gura_1900 hypothetical protein YP_003309103.1 KEGG: gur:Gura_1899 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein YP_003309104.1 PFAM: protein of unknown function DUF150; KEGG: gme:Gmet_1583 hypothetical protein YP_003309106.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: noc:Noc_2118 tRNA pseudouridine synthase B YP_003309107.1 PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: dol:Dole_2328 phospholipase D/transphosphatidylase YP_003309108.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: abu:Abu_0433 two-component sensor histidine kinase YP_003309109.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gsu:GSU0451 DNA-binding response regulator YP_003309110.1 TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; KEGG: nis:NIS_1670 sugar fermentation stimulation protein YP_003309111.1 KEGG: hap:HAPS_1298 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003309112.1 PFAM: glycine hydroxymethyltransferase; KEGG: mxa:MXAN_4766 serine hydroxymethyltransferase YP_003309113.1 KEGG: dac:Daci_4220 hypothetical protein YP_003309114.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: damage inducible protein CinA; molybdopterin binding domain; KEGG: dds:Ddes_1466 competence/damage-inducible protein CinA YP_003309115.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc2321 dehydrogenase/reductase oxidoreductase protein YP_003309116.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sil:SPO2914 MerR family transcriptional regulator YP_003309117.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003309118.1 PFAM: glutamine amidotransferase class-I; KEGG: sfu:Sfum_0596 glutamine amidotransferase class-I YP_003309119.1 KEGG: rfr:Rfer_1769 hypothetical protein YP_003309121.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hpp:HPP12_1186 ABC transporter ATP-binding protein YP_003309122.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: transcriptional regulator, gntR family protein YP_003309124.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mca:MCA2040 glutamate synthase subunit beta YP_003309125.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase subunit alpha domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: glo:Glov_3016 glutamate synthase (ferredoxin) YP_003309126.1 PFAM: glutamine synthetase; KEGG: sat:SYN_01613 glutamine synthetase YP_003309127.1 KEGG: ecq:ECED1_3164 hypothetical protein YP_003309128.1 KEGG: ses:SARI_03140 hypothetical protein YP_003309131.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dal:Dalk_2553 MATE efflux family protein YP_003309132.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter YP_003309133.1 KEGG: dal:Dalk_1794 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_003309134.1 PFAM: protein of unknown function DUF1009; KEGG: dat:HRM2_22450 hypothetical protein YP_003309135.1 KEGG: pca:Pcar_1255 UDP-N-acetylglucosamine acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003309136.1 KEGG: pca:Pcar_1255 UDP-N-acetylglucosamine acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_003309137.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mxa:MXAN_4725 beta-hydroxyacyl-(acyl-carrier- protein) dehydratase FabZ YP_003309138.1 TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: nmn:NMCC_0020 UDP-3-O-[3-hydroxymyristoyl] N- acetylglucosamine deacetylase YP_003309139.1 PFAM: UvrD/REP helicase; KEGG: bba:Bd3339 ATP-dependent DNA helicase YP_003309140.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; GCN5-related N- acetyltransferase; KEGG: gbm:Gbem_2428 cation diffusion facilitator family transporter YP_003309141.1 KEGG: ecz:ECS88_4241 hypothetical protein YP_003309142.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: sat:SYN_00133 lipid A biosynthesis lauroyl acyltransferase YP_003309143.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003309144.1 KEGG: sat:SYN_02057 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_003309145.1 KEGG: swp:swp_4884 hypothetical protein swp_4884 YP_003309146.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dps:DP3102 ABC transporter ATP-binding protein YP_003309147.1 PFAM: inner-membrane translocator; KEGG: hap:HAPS_1139 ABC transporter inner membrane subunit YP_003309148.1 PFAM: protein of unknown function DUF534; KEGG: vvu:VV1_2224 ABC-type uncharacterized transporter, periplasmic component YP_003309149.1 PFAM: protein of unknown function DUF534; KEGG: bbk:BARBAKC583_0047 ABC transporter periplasmic substrate-binding protein YP_003309150.1 PFAM: HutP family protein YP_003309151.1 KEGG: gme:Gmet_0981 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_003309152.1 PFAM: shikimate kinase; KEGG: vvy:VV2989 shikimate kinase I YP_003309153.1 PFAM: aldo/keto reductase; KEGG: kpn:KPN_01195 an aldehyde reductase YP_003309154.1 KEGG: ppr:PBPRA2948 hypothetical protein YP_003309155.1 KEGG: hypothetical protein YP_003309156.1 KEGG: sty:STY2867 hypothetical protein YP_003309157.1 PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; KEGG: efe:EFER_0091 quinate/shikimate dehydrogenase YP_003309158.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: abo:ABO_2537 pseudouridylate synthase YP_003309159.1 KEGG: vsp:VS_0556 P-protein [includes: chorismate mutase,prephenatedehydratase]; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; chorismate mutase YP_003309160.1 KEGG: bra:BRADO3320 hypothetical protein YP_003309163.1 PFAM: beta-lactamase; KEGG: reu:Reut_A3379 beta-lactamase-like YP_003309164.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; SMART: regulatory protein MarR; KEGG: ecv:APECO1_1713 hypothetical protein YP_003309165.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abc:ACICU_03092 hypothetical protein YP_003309166.1 KEGG: gur:Gura_1984 hypothetical protein YP_003309167.1 PFAM: protein of unknown function DUF975; KEGG: pmy:Pmen_3315 hypothetical protein YP_003309168.1 PFAM: hypothetical protein; CBS domain containing protein; KEGG: hypothetical protein YP_003309169.1 PFAM: protein of unknown function DUF299; KEGG: gur:Gura_4292 hypothetical protein YP_003309170.1 KEGG: bba:Bd1150 pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein YP_003309171.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: fph:Fphi_1457 S-adenosylmethionine (SAM)- dependent methyltransferase YP_003309173.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_3507 UDP-glucose 4-epimerase YP_003309174.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: dds:Ddes_0107 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003309175.1 PFAM: glycosyl transferase family 2; KEGG: nam:NAMH_1654 teichuronic acid biosynthesis YP_003309176.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: eum:ECUMN_3432 hypothetical protein YP_003309177.1 PFAM: glycosyl transferase family 2; KEGG: apa:APP7_1477 glycosyltransferase YP_003309178.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3358 endonuclease/exonuclease/phosphatase YP_003309179.1 PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: acb:A1S_2896 hypothetical protein YP_003309180.1 KEGG: ecp:ECP_2080 antigen polymerase YP_003309181.1 KEGG: vsa:VSAL_II1068 hypothetical protein YP_003309182.1 KEGG: gbm:Gbem_0979 tRNA delta(2)- isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003309183.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: hypothetical protein YP_003309184.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: glo:Glov_0507 UTP-glucose-1-phosphate uridylyltransferase YP_003309185.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pca:Pcar_2593 dTDP-glucose 4,6-dehydratase YP_003309186.1 KEGG: sun:SUN_1715 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD- dependent epimerase/dehydratase YP_003309187.1 KEGG: pin:Ping_3462 dTDP-4-dehydrorhamnose 3,5- epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003309188.1 PFAM: arylsulfotransferase; KEGG: ses:SARI_03956 hypothetical protein YP_003309189.1 PFAM: glycosyl transferase family 2; KEGG: aci:ACIAD0074 glycosyl transferase YP_003309190.1 KEGG: asu:Asuc_0532 phosphoheptose isomerase YP_003309191.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: abu:Abu_1797 ADP-heptose synthase YP_003309192.1 PFAM: glycosyl transferase family 2; KEGG: bcm:Bcenmc03_0849 glycosyl transferase YP_003309193.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: fph:Fphi_1255 ABC-type polysaccharide/polyol phosphate transporter ATPase component-like protein YP_003309194.1 PFAM: ABC transporter; KEGG: geo:Geob_1442 ABC-2 type transporter YP_003309195.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: nucleotidyl transferase; KEGG: abu:Abu_1817 glucose-1-phosphate thymidylyltransferase YP_003309196.1 PFAM: glycosyl transferase family 2; KEGG: kpn:KPN_02487 glycosyltransferase YP_003309197.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: dds:Ddes_0107 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003309198.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: hypothetical protein YP_003309199.1 TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: dat:HRM2_07220 hypothetical protein YP_003309200.1 KEGG: fph:Fphi_0631 hypothetical protein YP_003309201.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecz:ECS88_1500 autotransported outer membrane protein involved in cell adhesion YP_003309202.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vha:VIBHAR_01205 trehalose(maltose)-specific PTS system components IIBC YP_003309203.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: asa:ASA_0483 trehalose repressor YP_003309204.1 KEGG: gbm:Gbem_0823 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase YP_003309205.1 KEGG: vfm:VFMJ11_1728 hypothetical protein YP_003309206.1 KEGG: ionotropic glutamate receptor-invertebrate YP_003309207.1 TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: apl:APL_0699 3-phosphoshikimate 1- carboxyvinyltransferase YP_003309208.1 KEGG: glo:Glov_1592 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003309209.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vcj:VCD_000964 N-acetylase of ribosomal proteins-like acetyltransferase YP_003309210.1 PFAM: prephenate dehydrogenase; KEGG: maq:Maqu_1025 3-phosphoshikimate 1- carboxyvinyltransferase YP_003309211.1 KEGG: gme:Gmet_0346 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003309212.1 PFAM: extracellular ligand-binding receptor; KEGG: bba:Bd3385 branched-chain amino acid ABC transporter amino acid-binding protein YP_003309213.1 PFAM: inner-membrane translocator; KEGG: gbm:Gbem_1943 inner-membrane translocator YP_003309214.1 PFAM: inner-membrane translocator; KEGG: mxa:MXAN_6663 branched chain amino acid ABC transporter permease YP_003309215.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bba:Bd3388 branched-chain amino acid transporter YP_003309216.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dal:Dalk_4384 ABC transporter YP_003309217.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: ppr:PBPRA2286 RpiR family transcriptional regulatory protein YP_003309219.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vfi:VF_A0786 PTS system, glucose-specific II BC component YP_003309220.1 PFAM: N-acetylmannosamine-6-phosphate epimerase; KEGG: ecq:ECED1_5001 N-acetylmannosamine-6- phosphate 2-epimerase (ManNAc-6-P epimerase) YP_003309221.1 PFAM: protein of unknown function DUF152; KEGG: sun:SUN_1371 hypothetical protein YP_003309223.1 PFAM: polyprenyl synthetase; KEGG: spl:Spea_2990 polyprenyl synthetase YP_003309224.1 PFAM: exonuclease VII small subunit; KEGG: sde:Sde_3220 exodeoxyribonuclease VII small subunit YP_003309225.1 TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: pca:Pcar_1639 methyltransferase YP_003309227.1 KEGG: hypothetical protein YP_003309229.1 TIGRFAM: S-adenosylmethionine/tRNA- ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: pca:Pcar_1895 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003309230.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003309231.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003309232.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; methyltransferase type 12; KEGG: gsu:GSU3103 HemK family modification methylase YP_003309233.1 TIGRFAM: peptide chain release factor 1; PFAM: class I peptide chain release factor; PCRF domain protein; KEGG: gsu:GSU3104 peptide chain release factor 1 YP_003309235.1 KEGG: leucine-rich repeat protein (LRRP) YP_003309236.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: cco:CCC13826_0413 homoserine kinase (HSK; HK) YP_003309237.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccv:CCV52592_0494 glutamate/aspartate ABC transporter ATP-binding protein YP_003309238.1 TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: cff:CFF8240_1230 His/Glu/Gln/Arg/opine amino acid ABC transporter permease YP_003309239.1 KEGG: dal:Dalk_3606 lipase YP_003309240.1 PFAM: protein of unknown function DUF1385; KEGG: ppd:Ppro_2648 hypothetical protein YP_003309241.1 PFAM: protein of unknown function DUF147; KEGG: dal:Dalk_0397 protein of unknown function DUF147 YP_003309242.1 TIGRFAM: DNA repair protein RadA; SMART: ATPase AAA; KEGG: gur:Gura_0130 DNA repair protein RadA YP_003309243.1 KEGG: slo:Shew_3692 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003309244.1 KEGG: cff:CFF8240_1742 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003309245.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: gur:Gura_1879 beta-ketoacyl synthase YP_003309246.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: pca:Pcar_1439 acyl carrier protein YP_003309247.1 KEGG: geo:Geob_2049 hypothetical protein YP_003309248.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase; KEGG: pca:Pcar_1437 malonyl CoA-acyl carrier protein transacylase YP_003309250.1 KEGG: geo:Geob_2612 3-oxoacyl-(acyl-carrier- protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003309251.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ccs:CCNA_01792 50S ribosomal protein L32P YP_003309252.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003309253.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dds:Ddes_0873 protein of unknown function DUF6 transmembrane YP_003309254.1 PFAM: protein of unknown function DUF1121; KEGG: wsu:WS1833 hypothetical protein YP_003309255.1 KEGG: smt:Smal_1164 hypothetical protein YP_003309256.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: glo:Glov_3441 GTP-binding protein TypA YP_003309257.1 KEGG: prw:PsycPRwf_0549 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; peptidoglycan-binding protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003309258.1 KEGG: plu:plu2327 hypothetical protein YP_003309259.1 KEGG: nis:NIS_1628 heat shock protein HSP20 YP_003309260.1 PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: pha:PSHAa2745 peptidase, M13 (lipoprotein) YP_003309263.1 KEGG: AGAP011901-PA YP_003309264.1 KEGG: bur:Bcep18194_A4897 TetR family transcriptional regulator YP_003309265.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_0174 hypothetical protein YP_003309266.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: similar to dCMP deaminase ; K01493 dCMP deaminase YP_003309267.1 TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bba:Bd1054 asparaginyl-tRNA synthetase YP_003309269.1 PFAM: protein of unknown function DUF896 YP_003309270.1 KEGG: ret:RHE_CH04038 hypothetical protein YP_003309271.1 PFAM: creatininase; KEGG: tcx:Tcr_1799 creatininase YP_003309272.1 PFAM: aryldialkylphosphatase; KEGG: yen:YE1042 hydrolase YP_003309273.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: kpn:KPN_01745 ascorbate-specific PTS system enzyme IIC YP_003309274.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: kpn:KPN_01746 PTS family protein II component YP_003309275.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_01747 PTS family enzyme IIA, mannitol- specific, cryptic YP_003309276.1 PFAM: initiator RepB protein; KEGG: conserved hypothetical protein YP_003309277.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: ppd:Ppro_2802 chaperonin GroEL YP_003309278.1 PFAM: chaperonin Cpn10; KEGG: cla:Cla_1035 10 kD chaperonin (cpn10) YP_003309285.1 KEGG: cvi:CV_1336 hypothetical protein YP_003309286.1 KEGG: eum:ECUMN_0650 hypothetical protein YP_003309288.1 KEGG: hypothetical protein YP_003309290.1 KEGG: atc:AGR_C_820 hypothetical protein YP_003309293.1 KEGG: ecq:ECED1_0877 phage tail fiber protein YP_003309294.1 KEGG: sea:SeAg_B4453 phage tail protein YP_003309295.1 KEGG: spe:Spro_4957 baseplate J family protein YP_003309296.1 KEGG: spe:Spro_4921 lambda family phage portal protein YP_003309297.1 KEGG: hap:HAPS_0608 hypothetical protein YP_003309298.1 PFAM: terminase GpA; KEGG: spe:Spro_4922 terminase GpA YP_003309301.1 KEGG: cjj:CJJ81176_pVir0049 hypothetical protein YP_003309303.1 KEGG: conserved hypothetical protein YP_003309304.1 PFAM: regulatory protein LuxR YP_003309308.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003309309.1 KEGG: hypothetical protein YP_003309313.1 PFAM: DnaB domain protein helicase; KEGG: dvl:Dvul_2027 replicative DNA helicase YP_003309314.1 KEGG: asparagine-rich protein YP_003309317.1 KEGG: protein kinase domain containing protein YP_003309318.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: amc:MADE_01218 iron-containing alcohol dehydrogenase YP_003309319.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ccv:CCV52592_0372 oxygen-independent coproporphyrinogen III oxidase YP_003309320.1 KEGG: geo:Geob_3527 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003309321.1 PFAM: protein of unknown function DUF997; KEGG: dvl:Dvul_2875 hypothetical protein YP_003309322.1 TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: dvu:DVU0088 sodium/panthothenate symporter YP_003309323.1 KEGG: xca:xccb100_1399 secreted protein YP_003309324.1 PFAM: AzlC family protein; KEGG: abb:ABBFA_002009 AzlC family protein YP_003309325.1 PFAM: branched-chain amino acid transport YP_003309326.1 PFAM: ROK family protein; KEGG: rec:RHECIAT_CH0001621 probable transcriptional regulator protein, ROK family YP_003309327.1 PFAM: phosphoglycerate mutase; KEGG: asu:Asuc_1383 phosphoglycerate mutase YP_003309328.1 PFAM: glycoside hydrolase family 1; KEGG: elf:LF82_0158 6-phospho-beta-glucosidase AscB YP_003309329.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PTS system, glucose-like IIB subunint; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0975 PTS system, beta-glucoside- specific IIABC subunit YP_003309330.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA1869 beta-glucoside operon antiterminator YP_003309331.1 KEGG: abu:Abu_0545 EAL/GGDEF domain-containing protein YP_003309333.1 KEGG: asu:Asuc_1309 hypothetical protein YP_003309338.1 TIGRFAM: cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: wsu:WS1121 heavy metal-transporting ATPase YP_003309339.1 PFAM: Heavy metal transport/detoxification protein; KEGG: abu:Abu_1859 heavy metal-(Cd/Co/Hg/Pb/Zn)- translocating P-type ATPase YP_003309340.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: wsu:WS1120 transcriptional regulator YP_003309341.1 PFAM: protein of unknown function DUF554; KEGG: kpe:KPK_0711 hypothetical protein YP_003309344.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: gur:Gura_0468 regulatory protein, ArsR YP_003309345.1 TIGRFAM: redox-active disulfide protein 2; KEGG: geo:Geob_3502 redox-active disulfide protein 2 YP_003309346.1 PFAM: permease; KEGG: cha:CHAB381_0335 permease YP_003309347.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce4853 hypothetical protein YP_003309348.1 PFAM: MgtC/SapB transporter; KEGG: pau:PA14_61330 magnesium transporter MgtC family YP_003309350.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: ypb:YPTS_2489 magnesium-translocating P-type ATPase YP_003309352.1 PFAM: protein of unknown function DUF134; Sigma-70 region 4 type 2; dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dds:Ddes_0204 protein of unknown function DUF134 YP_003309355.1 KEGG: glo:Glov_2584 hypothetical protein YP_003309356.1 KEGG: met:M446_2449 hypothetical protein YP_003309360.1 KEGG: hypothetical protein YP_003309361.1 KEGG: ent:Ent638_0053 filamentous haemagglutinin outer membrane protein YP_003309363.1 KEGG: cha:CHAB381_1536 hemagglutination activity domain-containing protein YP_003309365.1 KEGG: conserved hypothetical protein YP_003309370.1 KEGG: yen:YE0934 hypothetical protein YP_003309371.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003309374.1 KEGG: avi:Avi_0081 hypothetical protein YP_003309375.1 KEGG: rfr:Rfer_2839 hypothetical protein YP_003309376.1 PFAM: KAP P-loop domain protein; KEGG: rhoptry protein YP_003309377.1 PFAM: HNH endonuclease; KEGG: abu:Abu_0109 hypothetical protein YP_003309378.1 KEGG: abu:Abu_0110 hypothetical protein YP_003309379.1 KEGG: son:SO_3608 serine/threonine protein kinase YP_003309380.1 PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: son:SO_3608 serine/threonine protein kinase YP_003309386.1 PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: ara:Arad_4755 hemolysin activator protein hec YP_003309387.1 KEGG: pmu:PM1543 hypothetical protein YP_003309388.1 KEGG: hypothetical protein YP_003309391.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: nam:NAMH_1550 MgpA protein YP_003309392.1 PFAM: protein of unknown function DUF161; KEGG: abu:Abu_1411 hypothetical protein YP_003309393.1 PFAM: HPr serine kinase domain protein; KEGG: afw:Anae109_0151 HPr kinase/phosphorylase YP_003309394.1 PFAM: sporulation domain protein; KEGG: GI12465 gene product from transcript GI12465- RA YP_003309395.1 PFAM: purine or other phosphorylase family 1; KEGG: shl:Shal_1632 purine phosphorylase family 1 YP_003309396.1 KEGG: pmr:PMI1702 hypothetical protein YP_003309397.1 PFAM: isochorismatase hydrolase; KEGG: plu:plu2555 nicotinamidase/pyrazinamidase YP_003309398.1 KEGG: rco:RC0779 folylpolyglutamate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_003309399.1 KEGG: dat:HRM2_05060 FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: ATPase AAA; peptidase M41; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003309400.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: PP-loop family protein YP_003309401.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: stage II sporulation D domain protein; KEGG: ppd:Ppro_1802 SpoIID/LytB domain-containing protein YP_003309402.1 PFAM: aminodeoxychorismate lyase; KEGG: avi:Avi_1532 hypothetical protein YP_003309403.1 KEGG: cko:CKO_03682 outer membrane lipoprotein Blc YP_003309404.1 PFAM: transcriptional regulator PadR family protein; KEGG: bja:bll1156 transcriptional regulatory protein YP_003309405.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: dal:Dalk_1123 NAD(P)H dehydrogenase (quinone) YP_003309406.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: sde:Sde_0275 SPFH domain-containing protein/band 7 family protein YP_003309407.1 KEGG: ngk:NGK_0997 hypothetical protein YP_003309409.1 KEGG: ara:Arad_4329 hypothetical protein YP_003309410.1 KEGG: smt:Smal_3964 hypothetical protein YP_003309411.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: ecv:APECO1_557 EntS/YbdA MFS transporter YP_003309412.1 PFAM: secretion protein HlyD; KEGG: tcx:Tcr_1133 secretion protein HlyD YP_003309413.1 KEGG: ccv:CCV52592_1086 TolC protein YP_003309414.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: mlo:mlr1172 hypothetical protein YP_003309415.1 PFAM: MltA-interacting MipA family protein; KEGG: spe:Spro_2730 MltA-interacting MipA family protein YP_003309416.1 PFAM: beta-lactamase; KEGG: pmr:PMI0732 metallo-beta-lactamase superfamily protein YP_003309417.1 PFAM: MscS Mechanosensitive ion channel; KEGG: tcx:Tcr_1584 MscS mechanosensitive ion channel YP_003309418.1 TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: ilo:IL0932 translation-associated GTPase YP_003309419.1 KEGG: sat:SYN_02178 uracil DNA glycosylase superfamily protein YP_003309420.1 PFAM: beta-lactamase; KEGG: gur:Gura_2063 beta-lactamase domain- containing protein YP_003309421.1 KEGG: hch:HCH_07011 hypothetical protein YP_003309422.1 PFAM: protein of unknown function DUF534; KEGG: vcj:VCD_003240 ABC transporter substrate- binding protein YP_003309423.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cbc:CbuK_1741 short chain dehydrogenase YP_003309424.1 KEGG: dps:DP0391 hypothetical protein YP_003309425.1 PFAM: hypothetical protein; KEGG: hsm:HSM_1000 TM2 domain-containing protein YP_003309426.1 KEGG: ypb:YPTS_3416 hypothetical protein YP_003309427.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: hypothetical protein ; K02899 large subunit ribosomal protein L27 YP_003309428.1 PFAM: protein of unknown function DUF464 YP_003309429.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: nmc:NMC1847 50S ribosomal protein L21 YP_003309430.1 KEGG: hypothetical protein YP_003309431.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bba:Bd1385 phosphodiesterase YP_003309432.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dal:Dalk_2553 MATE efflux family protein YP_003309433.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L) YP_003309435.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003309436.1 PFAM: carboxymuconolactone decarboxylase; 4- oxalocrotonate tautomerase; KEGG: bte:BTH_II0588 tautomerase enzyme family protein YP_003309437.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: dal:Dalk_0925 LysR family transcriptional regulator YP_003309438.1 KEGG: cbc:CbuK_0493 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003309439.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: afr:AFE_1463 dihydroorotase YP_003309440.1 KEGG: geo:Geob_2402 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003309441.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: sat:SYN_02850 dihydroorotate dehydrogenase, catalytic subunit YP_003309442.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: gsu:GSU1756 dihydroorotate dehydrogenase, electron transfer subunit YP_003309443.1 TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: aspartate transcarbamylase regulatory subunit; KEGG: vsp:VS_2741 aspartate carbamoyltransferase regulatory chain YP_003309444.1 KEGG: cvi:CV_0369 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003309445.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; phosphoribosylglycinamide synthetase; MGS domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl-phosphate synthetase large chain domain protein; protein of unknown function DUF201; KEGG: dat:HRM2_47760 CarB2 YP_003309446.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit YP_003309448.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bpt:Bpet1672 hypothetical protein YP_003309450.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: similar to predicted protein YP_003309451.1 TIGRFAM: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase; KEGG: ent:Ent638_2002 malate dehydrogenase (NAD) YP_003309452.1 KEGG: gbm:Gbem_2778 tRNA (guanine-N(7)-)- methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003309453.1 PFAM: 3-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: geo:Geob_2105 three-deoxy-D-manno-octulosonic- acid transferase domain protein YP_003309454.1 PFAM: MORN variant repeat protein; KEGG: spc:Sputcn32_0605 MORN repeat-containing protein YP_003309455.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: aha:AHA_2179 xanthine dehydrogenase subunit XdhC YP_003309456.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: ect:ECIAI39_3282 xanthine dehydrogenase subunit XdhB YP_003309457.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: ecg:E2348C_3118 xanthine dehydrogenase subunit XdhA YP_003309458.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: haloacid dehalogenase-like hydrolase family protein YP_003309460.1 KEGG: glo:Glov_0659 hypothetical protein YP_003309461.1 PFAM: AroM family protein; KEGG: eta:ETA_25570 protein of aro operon, regulated by AroR YP_003309462.1 PFAM: protein of unknown function DUF1177; KEGG: spe:Spro_1024 hypothetical protein YP_003309463.1 PFAM: protein of unknown function DUF917; KEGG: rle:RL0366 hypothetical protein YP_003309464.1 PFAM: oligopeptide transporter OPT superfamily protein; KEGG: spe:Spro_1023 oligopeptide transporter OPT superfamily protein YP_003309465.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: cff:CFF8240_0846 DNA-binding protein HU YP_003309466.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: hap:HAPS_0461 cytidylate kinase YP_003309467.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; methyltransferase type 11; methyltransferase small; methyltransferase type 12; KEGG: dol:Dole_2455 ribosomal protein L11 methyltransferase YP_003309468.1 KEGG: sfu:Sfum_1169 stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_003309469.1 PFAM: metallophosphoesterase; KEGG: gme:Gmet_1181 hypothetical protein YP_003309470.1 KEGG: geo:Geob_3590 RNA binding metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KH type 1 domain protein; metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_003309472.1 KEGG: sun:SUN_0435 hypothetical protein YP_003309473.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ccv:CCV52592_1797 CoA-substrate-specific enzyme activase domain-containing protein YP_003309474.1 KEGG: hypothetical protein ; K00872 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase YP_003309475.1 KEGG: sat:SYN_00123 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003309476.1 PFAM: NLP/P60 protein; KEGG: bbr:BB2967 hypothetical protein YP_003309477.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8 YP_003309478.1 PFAM: extracellular solute-binding protein family 1; KEGG: pcr:Pcryo_2162 extracellular solute-binding protein YP_003309479.1 KEGG: yen:YE1936 hypothetical protein YP_003309480.1 KEGG: vsp:VS_II0460 predicted membrane protein YP_003309481.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dal:Dalk_0825 tyrosine recombinase XerD YP_003309482.1 KEGG: ppd:Ppro_1578 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; SMART: ATPase AAA YP_003309483.1 PFAM: ATP-NAD/AcoX kinase; KEGG: geo:Geob_3461 ATP-NAD/AcoX kinase YP_003309484.1 PFAM: peptidase M23; KEGG: cvi:CV_3353 hypothetical protein YP_003309485.1 PFAM: protein of unknown function DUF214; KEGG: net:Neut_1527 hypothetical protein YP_003309486.1 PFAM: ABC transporter; KEGG: cla:Cla_0918 ABC transporter ATP-binding protein YP_003309487.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1215 sugar (glycoside-pentoside- hexuronide) transporter YP_003309488.1 KEGG: hypothetical protein YP_003309489.1 PFAM: protein of unknown function DUF795; KEGG: pca:Pcar_2281 nucleotidyltransferase YP_003309490.1 TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: oligopeptide transporter OPT superfamily protein; KEGG: lpc:LPC_2580 oligopeptide transporter YP_003309491.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: fph:Fphi_1333 pantothenate kinase YP_003309493.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003309494.1 KEGG: tau:Tola_0881 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003309495.1 KEGG: pmu:PM0077 pyruvate formate lyase-activating enzyme 1; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: radical SAM domain protein YP_003309496.1 KEGG: hypothetical protein LOC100010560 YP_003309498.1 TIGRFAM: thioesterase domain protein; KEGG: ank:AnaeK_1720 thioesterase domain protein YP_003309499.1 PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: sat:SYN_03159 transposase YP_003309500.1 KEGG: hch:HCH_00193 hypothetical protein YP_003309501.1 KEGG: hsm:HSM_1571 YadA domain-containing protein YP_003309502.1 PFAM: ribosomal protein S9; KEGG: gme:Gmet_0607 30S ribosomal protein S9 YP_003309503.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: sat:SYN_00232 50S ribosomal protein L13 YP_003309504.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: pca:Pcar_0993 guanine/hypoxanthine or xanthine/uracil permease YP_003309505.1 KEGG: vsp:VS_1017 ribosomal large subunit pseudouridine synthase C; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003309506.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: sat:SYN_00550 rod shape-determining protein YP_003309507.1 KEGG: geo:Geob_2699 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003309508.1 PFAM: peptidase M16 domain protein; KEGG: gsu:GSU1594 M16 family peptidase YP_003309509.1 PFAM: permease YjgP/YjgQ family protein; KEGG: gme:Gmet_1248 permease YjgP/YjgQ YP_003309510.1 PFAM: permease YjgP/YjgQ family protein; KEGG: glo:Glov_2589 permease YjgP/YjgQ family protein YP_003309511.1 PFAM: colicin V production protein; KEGG: rfe:RF_0045 hypothetical protein YP_003309512.1 KEGG: gur:Gura_3850 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003309513.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: nam:NAMH_1481 protein-export membrane protein SecF YP_003309514.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: sat:SYN_01524 protein translocase subunit YP_003309515.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: sat:SYN_01734 4-amino-4-deoxychorismate lyase YP_003309516.1 KEGG: pca:Pcar_2408 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; phosphoesterase DHHA1; threonyl/alanyl tRNA synthetase SAD YP_003309517.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: apa:APP7_0341 ABC transporter ATP- binding protein YP_003309518.1 PFAM: OstA family protein; KEGG: conserved hypothetical protein YP_003309519.1 KEGG: gme:Gmet_1424 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein MutS; MutS III domain protein YP_003309520.1 PFAM: short-chain alcohol dehydrogenase; KEGG: ppr:PBPRA2527 trans-2-enoyl-CoA reductase YP_003309521.1 KEGG: ret:RHE_CH00113 hydrolase protein YP_003309523.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: fph:Fphi_1539 protease GTP-binding subunit YP_003309524.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003309525.1 KEGG: eca:ECA0338 hypothetical protein; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003309526.1 KEGG: eca:ECA0339 sugar-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003309527.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: eca:ECA0340 PTS system, IIBC component YP_003309528.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: ecz:ECS88_4077 phosphotransferase system, fructose-specific IIsubunit beta YP_003309529.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ecg:E2348C_3926 predicted fructose-specific PTS enzymes, IIA component YP_003309530.1 PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003309531.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: psa:PST_0487 xanthine phosphoribosyltransferase YP_003309532.1 PFAM: antibiotic biosynthesis monooxygenase; KEGG: yen:YE3018 hypothetical protein YP_003309533.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bmj:BMULJ_01948 GntR family transcriptional regulator YP_003309534.1 PFAM: sugar isomerase (SIS); KEGG: vvy:VVA1515 phosphosugar isomerase YP_003309535.1 KEGG: pmr:PMI1285 hypothetical protein YP_003309536.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: NADH oxidase lateral transfer candidate YP_003309537.1 PFAM: dihydrouridine synthase; KEGG: abn:AB57_0641 tRNA-dihydrouridine synthase A YP_003309538.1 KEGG: dac:Daci_1417 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003309540.1 PFAM: ribonucleotide reductase; KEGG: pmr:PMI0413 ribonucleoside-diphosphate reductase beta chain YP_003309541.1 KEGG: btr:Btr_0212 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ribonucleotide reductase domain protein; ribonucleotide reductase large subunit domain protein YP_003309542.1 TIGRFAM: NrdI protein; PFAM: NrdI family protein; KEGG: sit:TM1040_0520 ribonucleotide reductase stimulatory protein YP_003309543.1 KEGG: TRX1; potential thioredoxin similar to S. cerevisiae TRX1 (YLR043C) ; K03671 thioredoxin 1 YP_003309544.1 PFAM: conserved hypothetical protein; KEGG: dal:Dalk_1999 hypothetical protein YP_003309545.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: cja:CJA_2823 OmpA family protein YP_003309546.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003309547.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; peptidase S14 ClpP; KEGG: vha:VIBHAR_03044 protease YP_003309548.1 KEGG: sat:SYN_00710 DIM6/ntab flavoprotein family protein YP_003309549.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: gbm:Gbem_0623 response regulator receiver protein YP_003309550.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; KEGG: tau:Tola_0177 Cof-like hydrolase YP_003309551.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dal:Dalk_3686 methyltransferase type 11 YP_003309552.1 KEGG: apj:APJL_2082 thiol-disulfide isomerase and thioredoxins YP_003309553.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: hiq:CGSHiGG_00235 NAD(P)H oxidoreductase YP_003309554.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: pca:Pcar_1447 bifunctional enzyme 3,4-dihydroxy-2-butanone 4-phosphate/GTP cyclohydrolase II YP_003309555.1 KEGG: apa:APP7_0407 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, subunit alpha; PFAM: Lumazine-binding protein YP_003309556.1 KEGG: gme:Gmet_1624 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_003309557.1 KEGG: geo:Geob_2678 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003309558.1 PFAM: peptidase M29 aminopeptidase II; KEGG: bhe:BH02500 aminopeptidase YP_003309559.1 TIGRFAM: phosphoheptose isomerase; KEGG: pin:Ping_1335 phosphoheptose isomerase YP_003309560.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: neu:NE1922 transcription regulator LysR YP_003309563.1 KEGG: ecg:E2348C_0322 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003309564.1 KEGG: dde:Dde_1149 hypothetical protein YP_003309565.1 KEGG: sek:SSPA3744 hypothetical protein YP_003309566.1 KEGG: yen:YE2678 phosphotransferase system component YP_003309567.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hso:HS_1032 DNA-binding transcriptional repressor PurR YP_003309570.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: geo:Geob_1286 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_003309572.1 KEGG: similar to TiTiN family member (ttn-1) YP_003309574.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: oan:Oant_2401 NAD-dependent epimerase/dehydratase YP_003309575.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: lip:LI0605 hypothetical protein YP_003309577.1 PFAM: elongation factor Tu domain 2 protein; KEGG: nis:NIS_0260 elongation factor Tu YP_003309579.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: fph:Fphi_0608 glutamate-5-semialdehyde dehydrogenase YP_003309580.1 KEGG: ccv:CCV52592_0755 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003309582.1 PFAM: SNARE associated Golgi protein; KEGG: pca:Pcar_1428 hypothetical protein YP_003309583.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: alpha-amylase YP_003309584.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: vfm:VFMJ11_1029 multidrug resistance ABC transporter ATP-binding and permease YP_003309585.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: bas:BUsg464 multidrug resistance-like ATP- binding protein Mdl YP_003309586.1 KEGG: geo:Geob_1889 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_003309587.1 PFAM: Domain of unknown function DUF1858; KEGG: gbm:Gbem_1902 hypothetical protein YP_003309589.1 KEGG: hypothetical protein YP_003309591.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRB1300 hypothetical protein YP_003309592.1 KEGG: Viral A-type inclusion protein repeat containing protein YP_003309594.1 KEGG: protoporphyrinogen oxidase ; K00231 protoporphyrinogen oxidase YP_003309595.1 KEGG: spq:SPAB_02213 hypothetical protein YP_003309597.1 KEGG: plu:plu2878 hypothetical protein YP_003309598.1 KEGG: bgl:bglu_1g15760 hypothetical protein YP_003309599.1 KEGG: PST-A protein YP_003309601.1 KEGG: abm:ABSDF1045 hypothetical protein YP_003309607.1 KEGG: plu:plu2894 hypothetical protein YP_003309613.1 KEGG: abm:ABSDF2479 bacteriophage protein YP_003309614.1 KEGG: hypothetical protein YP_003309615.1 KEGG: plu:plu0377 hypothetical protein YP_003309616.1 TIGRFAM: phage uncharacterized protein; KEGG: erg:ERGA_CDS_03960 hypothetical protein YP_003309617.1 KEGG: Viral A-type inclusion protein repeat containing protein YP_003309629.1 KEGG: tdn:Suden_1565 DNA (cytosine-5-)- methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_003309631.1 KEGG: hypothetical protein; K06679 mitotic spindle assembly checkpoint protein MAD1 YP_003309634.1 KEGG: hypothetical protein YP_003309638.1 PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; SMART: helix-turn-helix domain protein YP_003309644.1 KEGG: gbm:Gbem_2989 phage regulatory protein, Rha family YP_003309645.1 KEGG: tmz:Tmz1t_0251 transcriptional regulator, XRE family YP_003309646.1 KEGG: eci:UTI89_C2637 antirepressor protein YP_003309647.1 PFAM: ERF family protein; KEGG: eck:EC55989_2645 DNA single-strand annealing protein; essential recombination function protein Erf YP_003309648.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pca:Pcar_0643 ssDNA-binding protein YP_003309650.1 PFAM: pentapeptide repeat containing protein; KEGG: hit:NTHI1489 hypothetical protein YP_003309655.1 KEGG: ccv:CCV52592_0062 hypothetical protein YP_003309663.1 PFAM: Resolvase domain; Recombinase; KEGG: glo:Glov_0859 resolvase domain YP_003309668.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_B0827 GCN5-related N- acetyltransferase YP_003309670.1 PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: cvi:CV_4236 MerR family transcriptional regulator YP_003309673.1 TIGRFAM: RNA ligase, DRB0094 family; KEGG: hypothetical protein YP_003309676.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: cps:CPS_2773 lipid A biosynthesis acyltransferase YP_003309682.1 KEGG: dimA; basic-leucine zipper (bZIP) transcription factor YP_003309683.1 PFAM: protein of unknown function DUF1211; KEGG: dar:Daro_3436 hypothetical protein YP_003309686.1 PFAM: peptidase S24 and S26 domain protein; KEGG: rbo:A1I_00030 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_003309691.1 KEGG: atc:AGR_C_3833 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_003309692.1 KEGG: ksnD; kinesin 4 YP_003309693.1 KEGG: hypothetical protein YP_003309697.1 KEGG: hypothetical protein YP_003309698.1 KEGG: malaria antigen YP_003309701.1 KEGG: plu:plu2878 hypothetical protein YP_003309703.1 KEGG: bav:BAV1335 phage protein YP_003309705.1 KEGG: gp1-related protein YP_003309706.1 PFAM: protein of unknown function DUF1410 YP_003309710.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: rbo:A1I_07095 DNA repair protein RadC YP_003309711.1 PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein YP_003309712.1 PFAM: PSP1 domain protein; KEGG: signal peptidase-like protein YP_003309713.1 PFAM: methyltransferase small; KEGG: cju:C8J_0457 hypothetical protein YP_003309714.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmu:PM0033 hypothetical protein YP_003309715.1 PFAM: protein of unknown function DUF34; KEGG: dat:HRM2_29360 hypothetical protein YP_003309716.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: pca:Pcar_1430 DNA-directed RNA polymerase, sigma 70/sigma 32 subunit YP_003309717.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_5204 RNA polymerase sigma factor RpoD YP_003309718.1 KEGG: gur:Gura_4048 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein YP_003309720.1 KEGG: cla:Cla_1089 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003309721.1 PFAM: protein of unknown function DUF370; KEGG: sfu:Sfum_3631 hypothetical protein YP_003309722.1 KEGG: gme:Gmet_0620 DNA-directed RNA polymerase, subunit beta-prime; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase subunit alpha; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_003309723.1 KEGG: similar to DNA-directed RNA polymerase beta subunit; TIGRFAM: DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase subunit beta YP_003309724.1 TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: dar:Daro_0311 50S ribosomal protein L7/L12 YP_003309725.1 PFAM: ribosomal protein L10; KEGG: hpp:HPP12_1165 50S ribosomal protein L10 YP_003309726.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: sat:SYN_00068 50S ribosomal protein L1P YP_003309727.1 KEGG: nam:NAMH_0176 ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11 YP_003309728.1 KEGG: pca:Pcar_0689 transcription termination/antitermination factor NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein YP_003309729.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: wbr:WGLp516 hypothetical protein YP_003309730.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: PRPL33; plastid ribosomal protein L33 YP_003309731.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dal:Dalk_2294 glyoxylate reductase YP_003309732.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: bph:Bphy_0296 PTS system, N-acetylglucosamine- specific IIBC subunit YP_003309733.1 PFAM: YdjC family protein; KEGG: yen:YE0972 hypothetical protein YP_003309734.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: eca:ECA0858 beta-glucoside operon antiterminator YP_003309735.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sfu:Sfum_0738 DNA-directed DNA polymerase YP_003309737.1 KEGG: vvu:VV1_0333 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_003309738.1 KEGG: conserved hypothetical protein YP_003309739.1 KEGG: predicted protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein YP_003309742.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cff:CFF8240_0830 amino acid carrier protein YP_003309743.1 PFAM: aminotransferase class I and II; KEGG: ypg:YpAngola_A2760 aminotransferase, classes I and II YP_003309744.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: dps:DP0707 hypothetical protein YP_003309745.1 KEGG: dol:Dole_0983 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_003309746.1 PFAM: regulatory protein RecX; KEGG: gur:Gura_0221 regulatory protein RecX YP_003309747.1 KEGG: ilo:IL0742 RecA recombinase; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_003309748.1 KEGG: SLEI family protein YP_003309749.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: ppf:Pput_3571 PDZ/DHR/GLGF domain-containing protein YP_003309750.1 PFAM: Tetrahydrodipicolinate succinyltransferase domain protein; transferase; KEGG: hypothetical protein YP_003309751.1 KEGG: tdn:Suden_1870 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003309752.1 KEGG: bur:Bcep18194_A6286 hypothetical protein YP_003309753.1 PFAM: cysteine-rich small domain; KEGG: rpt:Rpal_1186 hypothetical protein YP_003309754.1 KEGG: hypothetical protein YP_003309756.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: vpa:VP0620 hypothetical protein YP_003309757.1 KEGG: GA17820 gene product from transcript GA17820- RA YP_003309758.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: sbl:Sbal_0823 helix-turn-helix domain- containing protein YP_003309760.1 KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: semialdehyde dehydrogenase dimerisation region; semialdehyde dehydrogenase NAD - binding YP_003309761.1 KEGG: gur:Gura_0234 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003309762.1 KEGG: bcs:BCAN_A0953 hypothetical protein YP_003309763.1 KEGG: dat:HRM2_37680 DapF; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003309764.1 TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: hhe:HH0618 aspartate kinase YP_003309765.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: afw:Anae109_0353 diaminopimelate decarboxylase YP_003309766.1 KEGG: cco:CCC13826_1826 hypothetical protein YP_003309768.1 KEGG: maq:Maqu_2483 hypothetical protein YP_003309770.1 KEGG: tau:Tola_0451 PTS system, lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003309771.1 PFAM: glycoside hydrolase family 1; KEGG: ppr:PBPRB2006 glycosyl hydrolase YP_003309772.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: kpn:KPN_00848 transcriptional regulator YP_003309773.1 PFAM: protein of unknown function DUF419; KEGG: abo:ABO_0644 hypothetical protein YP_003309774.1 KEGG: bpy:Bphyt_5572 hypothetical protein YP_003309775.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vcm:VCM66_A0302 GCN5-related N- acetyltransferase YP_003309776.1 KEGG: rme:Rmet_0127 cobalamin synthesis protein, P47K YP_003309777.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; SMART: regulatory protein GntR HTH; KEGG: abn:AB57_1945 GntR family transcriptional regulator YP_003309778.1 KEGG: spe:Spro_4277 glucose-6-phosphate isomerase- like protein YP_003309779.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: aha:AHA_2339 fructose permease IID component YP_003309780.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: aha:AHA_2340 PTS system, fructose(mannose)- specific IIC YP_003309781.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: spe:Spro_4280 PTS system sorbose subfamily IIB component YP_003309782.1 PFAM: PTS system fructose subfamily IIA component; KEGG: aha:AHA_2342 PTS system mannose/fructose/sorbose family IIsubunit alpha YP_003309783.1 KEGG: aha:AHA_2343 hypothetical protein YP_003309784.1 PFAM: glucose-6-phosphate isomerase; KEGG: spe:Spro_4276 glucose-6-phosphate isomerase YP_003309785.1 PFAM: MORN variant repeat protein; KEGG: sfv:SFV_0393 hypothetical protein YP_003309786.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pca:Pcar_0201 cold shock protein YP_003309787.1 KEGG: sfu:Sfum_2173 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_003309788.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: glo:Glov_1214 homoserine dehydrogenase YP_003309789.1 PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transporter substrate-binding protein YP_003309790.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_2229 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003309791.1 PFAM: isochorismatase hydrolase; KEGG: ppd:Ppro_1867 isochorismatase hydrolase YP_003309792.1 PFAM: helix-turn-helix HxlR type; pyridoxamine 5'- phosphate oxidase-related FMN-binding; KEGG: gur:Gura_1554 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003309793.1 KEGG: cco:CCC13826_1328 hypothetical protein YP_003309794.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bxe:Bxe_B2346 dehydrogenase YP_003309795.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: ent:Ent638_2386 PTS system mannose/fructose/sorbose family IIsubunit alpha YP_003309796.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: spe:Spro_4278 PTS system mannose/fructose/sorbose family IID component YP_003309797.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: aha:AHA_2340 PTS system, fructose(mannose)- specific IIC YP_003309798.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: ecv:APECO1_2997 hypothetical protein YP_003309799.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: dat:HRM2_49330 PflD2 YP_003309800.1 PFAM: N-acetylmannosamine-6-phosphate epimerase; KEGG: eck:EC55989_4918 N-acetylmannosamine-6- phosphate 2-epimerase (ManNAc-6-P epimerase) YP_003309801.1 PFAM: hypothetical protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: set:SEN3978 DeoR family regulatory protein YP_003309802.1 KEGG: dps:DP1824 pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM domain protein YP_003309803.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: gur:Gura_2466 4-oxalocrotonate tautomerase YP_003309804.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbc:CbuK_0365 glycine betaine transport ATP- binding protein YP_003309805.1 PFAM: substrate-binding region of ABC-type glycine betaine transporter; binding-protein-dependent transporters inner membrane component; KEGG: hpp:HPP12_0825 osmoprotection protein YP_003309806.1 KEGG: afw:Anae109_0547 hypothetical protein YP_003309807.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: vok:COSY_0382 glutamate 5-kinase YP_003309808.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_3451 hypothetical protein YP_003309809.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: abn:AB57_3169 LysR family transcriptional regulator YP_003309810.1 PFAM: ROK family protein; KEGG: msu:MS1413 NagC protein YP_003309811.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: ecl:EcolC_0150 xylulokinase YP_003309812.1 KEGG: hypothetical protein LOC100208276; TIGRFAM: xylose isomerase; PFAM: xylose isomerase YP_003309813.1 PFAM: inner-membrane translocator; KEGG: hip:CGSHiEE_06515 D-xylose ABC transporter permease YP_003309814.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmw:Mmwyl1_1866 D-xylose ABC transporter ATPase YP_003309815.1 TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: apa:APP7_1998 D-xylose transporter subunit XylF YP_003309816.1 PFAM: YheO domain protein; KEGG: pmr:PMI2799 hypothetical protein YP_003309817.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: efe:EFER_4282 D-allose transporter subunit ; periplasmic-binding component of ABC superfamily YP_003309818.1 PFAM: ROK family protein; KEGG: ect:ECIAI39_4508 D-allose kinase YP_003309819.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ecv:APECO1_2365 allulose-6-phosphate 3- epimerase YP_003309820.1 PFAM: inner-membrane translocator; KEGG: tau:Tola_1972 inner-membrane translocator YP_003309821.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tau:Tola_1973 ABC transporter YP_003309822.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: hch:HCH_06458 transcriptional regulator YP_003309823.1 PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; KEGG: vfi:VF_2049 maltodextrin glucosidase YP_003309824.1 KEGG: nse:NSE_0416 competence protein F YP_003309826.1 PFAM: protein of unknown function UPF0102; KEGG: vvy:VV0603 hypothetical protein YP_003309827.1 PFAM: ribonuclease HII/HIII; KEGG: sat:SYN_00771 ribonuclease HII YP_003309828.1 KEGG: vco:VC0395_0223 methylated-DNA--protein- cysteine S-methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding YP_003309829.1 KEGG: geo:Geob_1027 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003309831.1 KEGG: Viral A-type inclusion protein repeat YP_003309833.1 KEGG: abu:Abu_2199 tRNA pseudouridine synthase A YP_003309834.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: dat:HRM2_44240 Gph2 YP_003309835.1 PFAM: Vault protein inter-alpha-trypsin domain protein; KEGG: rfr:Rfer_2477 hypothetical protein YP_003309836.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gur:Gura_3907 cysteine synthase A YP_003309837.1 PFAM: metallophosphoesterase; KEGG: bba:Bd3503 phosphoesterase YP_003309838.1 PFAM: thymidine kinase; KEGG: mxa:MXAN_5072 thymidine kinase YP_003309839.1 PFAM: glycoside hydrolase family 4; KEGG: kpe:KPK_2684 maltose-6'-phosphate glucosidase YP_003309840.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: asa:ASA_2951 bifunctional maltose and glucose- specific PTS system components IICB YP_003309841.1 SMART: regulatory protein ArsR; KEGG: atc:AGR_C_2461 hypothetical protein YP_003309843.1 KEGG: gur:Gura_2446 PEP phosphonomutase and related enzymes-like protein YP_003309844.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: tau:Tola_1975 RpiR family transcriptional regulator YP_003309845.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: rlt:Rleg2_5489 ROK family protein YP_003309846.1 KEGG: dal:Dalk_3928 CheW protein YP_003309847.1 PFAM: chemotaxis sensory transducer; KEGG: vfi:VF_A1084 methyl-accepting chemotaxis protein YP_003309848.1 KEGG: conserved hypothetical protein YP_003309849.1 KEGG: hypothetical protein YP_003309850.1 SMART: CheW domain protein; KEGG: nis:NIS_0604 chemotaxis sensor histidine kinase CheA YP_003309851.1 KEGG: pca:Pcar_0588 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003309852.1 PFAM: protein of unknown function DUF55; KEGG: vei:Veis_4221 hypothetical protein YP_003309853.1 PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: dal:Dalk_4198 vitamin B12 dependent methionine synthase activation region YP_003309854.1 PFAM: homocysteine S-methyltransferase; cobalamin B12-binding domain protein; methionine synthase B12- binding module cap domain protein; dihydropteroate synthase DHPS; KEGG: gsu:GSU2921 5-methyltetrahydrofolate- homocysteine methyltransferase, truncation YP_003309856.1 PFAM: protein of unknown function DUF975 YP_003309857.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: geo:Geob_2403 RNA methyltransferase, TrmH family, group 3 YP_003309858.1 KEGG: geo:Geob_0687 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003309860.1 KEGG: mature-parasite-infected erythrocyte surface antigen YP_003309861.1 KEGG: pca:Pcar_1850 O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003309862.1 PFAM: glycosyl transferase family 9; KEGG: lip:LI0698 ADP-heptose:LPS heptosyltransferase II YP_003309863.1 PFAM: glycosyl transferase family 9; KEGG: dvm:DvMF_3136 lipopolysaccharide heptosyltransferase II YP_003309864.1 KEGG: asa:ASA_0099 ADP-heptose:LPS heptosyltransferase II YP_003309865.1 KEGG: abu:Abu_1820 hypothetical protein YP_003309866.1 PFAM: glycosyl transferase group 1; KEGG: dvu:DVU3192 glycosyl transferase, group 1 family protein YP_003309867.1 KEGG: sfu:Sfum_3370 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase ; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003309868.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; KEGG: gur:Gura_2302 NAD-dependent epimerase/dehydratase YP_003309869.1 PFAM: glycosyl transferase group 1; KEGG: ecy:ECSE_2304 glycosyl transferase YP_003309870.1 PFAM: glycosyl transferase group 1; KEGG: acb:A1S_0059 glycosyltransferase YP_003309871.1 PFAM: glycosyl transferase group 1; KEGG: wsu:WS0250 galactosyltransferase YP_003309872.1 PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_0195 glycosyl transferase, group 1 YP_003309873.1 PFAM: glycosyl transferase family 2; KEGG: hso:HS_0291 UDP-glucose--lipooligosaccharide beta 1-4 glucosyltransferase YP_003309874.1 KEGG: ppd:Ppro_3391 glycosyl transferase YP_003309875.1 KEGG: abu:Abu_1814 O-antigen polymerase YP_003309876.1 PFAM: glycosyl transferase group 1; KEGG: hap:HAPS_1022 glycosyl transferase, group 1 YP_003309877.1 PFAM: glycosyl transferase family 9; KEGG: hdu:HD1720 lipooligosaccharide D-glycero-D- manno-heptosyltransferase YP_003309878.1 PFAM: polysaccharide deacetylase; KEGG: ecw:EcE24377A_F0046 polysaccharide deacetylase family protein YP_003309879.1 KEGG: ecq:ECED1_3599 hypothetical protein YP_003309880.1 KEGG: bvi:Bcep1808_0894 hypothetical protein YP_003309881.1 KEGG: pmr:PMI2919 hypothetical protein YP_003309882.1 PFAM: protease-associated PA domain protein; KEGG: sfr:Sfri_2895 peptidase M28 YP_003309883.1 TIGRFAM: adenylate-forming enzyme; KEGG: lpc:LPC_1055 coenzyme F390 synthetase FtsA YP_003309884.1 PFAM: beta-lactamase; KEGG: lpp:lpp1599 hypothetical protein YP_003309885.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; KEGG: lpp:lpp1601 3-oxoacyl-(acyl carrier protein) synthase III YP_003309886.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: lpc:LPC_1058 3-beta-hydroxysteroid dehydrogenase/isomerase YP_003309887.1 KEGG: ypk:y2326 hypothetical protein YP_003309888.1 KEGG: ypi:YpsIP31758_2102 hypothetical protein YP_003309889.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5145 short-chain dehydrogenase/reductase SDR YP_003309890.1 KEGG: bja:bll5145 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003309891.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ent:Ent638_1309 GntR family transcriptional regulator YP_003309892.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mmw:Mmwyl1_0670 GDSL family lipase YP_003309893.1 PFAM: glycoside hydrolase family 1; KEGG: efe:EFER_3958 glycosyl phosphatase YP_003309894.1 KEGG: hsm:HSM_0456 PTS system lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003309895.1 PFAM: metallophosphoesterase; KEGG: bra:BRADO3710 protein serine- threonine phosphatase YP_003309896.1 KEGG: eba:p1B263 hypothetical protein YP_003309897.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ppr:PBPRA1380 heat shock protein HslJ YP_003309898.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aci:ACIAD1838 AraC family transcriptional regulator YP_003309899.1 PFAM: polysaccharide deacetylase; KEGG: polysaccharide deacetylase family protein YP_003309901.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5644 carbohydrate ABC transporter YP_003309902.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: scl:sce5645 carbohydrate ABC transporter YP_003309903.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dds:Ddes_1101 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003309904.1 KEGG: hypothetical protein YP_003309905.1 KEGG: conserved hypothetical protein YP_003309906.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: yen:YE0580 nicotinamide-nucleotide adenylyltransferase YP_003309907.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: msu:MS0193 PnuC protein YP_003309908.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: hch:HCH_00129 RNA:NAD 2'-phosphotransferase YP_003309909.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein YP_003309910.1 KEGG: hypothetical protein YP_003309911.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_7192 NUDIX family hydrolase YP_003309912.1 KEGG: sun:SUN_0817 hypothetical protein YP_003309915.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003309919.1 KEGG: pfl:PFL_0642 hypothetical protein YP_003309920.1 KEGG: cvi:CV_1336 hypothetical protein YP_003309923.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dal:Dalk_0850 MarR family transcriptional regulator YP_003309924.1 KEGG: dvm:DvMF_2265 transcriptional regulator, MarR family YP_003309925.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: vei:Veis_2683 alcohol dehydrogenase YP_003309926.1 KEGG: see:SNSL254_A4061 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003309927.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: avn:Avin_22030 zinc-containing alcohol dehydrogenase superfamily YP_003309928.1 PFAM: carbohydrate kinase FGGY; KEGG: spq:SPAB_04699 hypothetical protein YP_003309929.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: ect:ECIAI39_3966 phosphotransferase system permease IIC YP_003309930.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: sea:SeAg_B4009 IIB component of PTS system YP_003309931.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sea:SeAg_B4010 phosphoenolpyruvate- dependent sugar phosphotransferase system, eiia 2 YP_003309932.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; KEGG: eca:ECA0343 PTS system regulatory protein YP_003309933.1 KEGG: ppw:PputW619_2987 hypothetical protein YP_003309934.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dds:Ddes_2109 ABC transporter YP_003309936.1 KEGG: hypothetical protein YP_003309937.1 PFAM: formate/nitrite transporter; KEGG: spe:Spro_4597 nitrite transporter NirC YP_003309938.1 PFAM: MltA-interacting MipA family protein; KEGG: ent:Ent638_1672 MltA-interacting MipA family protein YP_003309939.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bba:Bd0709 macrolide ABC transporter ATP- binding protein YP_003309940.1 PFAM: protein of unknown function DUF214; KEGG: cla:Cla_1167 ABC transporter permease YP_003309942.1 PFAM: regulatory protein TetR; KEGG: smd:Smed_3750 TetR family transcriptional regulator YP_003309943.1 KEGG: smt:Smal_2106 hypothetical protein YP_003309944.1 KEGG: glo:Glov_1382 hypothetical protein YP_003309945.1 PFAM: protein of unknown function DUF477; KEGG: asu:Asuc_1048 hypothetical protein YP_003309946.1 PFAM: transposase IS200-family protein; KEGG: plu:plu4617 IS200 family transposase YP_003309947.1 KEGG: efe:EFER_1745 hypothetical protein YP_003309948.1 PFAM: metallophosphoesterase; KEGG: mrd:Mrad2831_5193 metallophosphoesterase YP_003309949.1 PFAM: PRD domain protein; KEGG: yen:YE3777 transcriptional regulator YP_003309950.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dat:HRM2_38070 transcriptional regulator (MarR family protein) YP_003309951.1 KEGG: hypothetical protein YP_003309952.1 PFAM: streptomycin adenylyltransferase; KEGG: lpc:LPC_1600 aminoglycoside 6- adenylyltransferase YP_003309954.1 KEGG: kpe:KPK_3238 PAP2 family protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_003309955.1 KEGG: conserved hypothetical protein YP_003309957.1 PFAM: regulatory protein TetR; KEGG: pha:PSHAa0651 transcriptional regulator YP_003309958.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: saz:Sama_1785 MerR family transcriptional regulator YP_003309959.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PRD domain protein; KEGG: kpe:KPK_5021 transcriptional regulator/PTS system, IIA component YP_003309960.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vpa:VPA0231 phosphotransferase enzyme II, A component YP_003309961.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: vpa:VPA0230 sugar phosphotransferase component II B YP_003309962.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: yps:YPTB2602 ascorbate-specific PTS system enzyme IIC YP_003309963.1 PFAM: aryldialkylphosphatase; KEGG: ecv:APECO1_3084 predicted hydrolase YP_003309964.1 PFAM: creatininase; KEGG: ppw:PputW619_3275 creatininase YP_003309965.1 PFAM: KDPG and KHG aldolase; KEGG: vfm:VFMJ11_A1106 KHG/KDPG aldolase YP_003309966.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_0727 TetR family transcriptional regulator YP_003309967.1 KEGG: hypothetical protein YP_003309968.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_1731 hypothetical protein YP_003309969.1 PFAM: sodium/hydrogen exchanger; KEGG: sfu:Sfum_1529 sodium/hydrogen exchanger YP_003309970.1 KEGG: sat:SYN_00670 hypothetical protein YP_003309972.1 KEGG: ent:Ent638_1308 PTS system lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003309973.1 PFAM: glycoside hydrolase family 1; KEGG: tau:Tola_0450 beta-glucosidase YP_003309974.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: kpn:KPN_00848 transcriptional regulator YP_003309975.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: oan:Oant_4145 GntR family transcriptional regulator YP_003309976.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpe:KPK_5267 sorbitol-6-phosphate 2- dehydrogenase YP_003309977.1 PFAM: PTS system fructose subfamily IIA component; KEGG: sgl:SG2427 PTS system IIA component YP_003309978.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: sgl:SG2426 PTS system IIB component YP_003309979.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: sgl:SG2425 PTS system IIC component YP_003309980.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: see:SNSL254_A4048 PTS system mannose/fructose/sorbose family IID component YP_003309981.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: ppr:PBPRB0362 mannitol-1-phosphate 5- dehydrogenase YP_003309982.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: avn:Avin_22050 dihydroxyacetone kinase, L subunit YP_003309983.1 PFAM: Dak kinase; KEGG: psp:PSPPH_2724 glycerone kinase YP_003309984.1 TIGRFAM: 3-hexulose-6-phosphate synthase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: kpn:KPN_02957 hexulose 6 phosphate synthase YP_003309985.1 TIGRFAM: 6-phospho 3-hexuloisomerase; PFAM: sugar isomerase (SIS); KEGG: seh:SeHA_C3252 3-hexulose-6-phosphate isomerase YP_003309986.1 PFAM: sodium:dicarboxylate symporter; KEGG: sfr:Sfri_2481 sodium:dicarboxylate symporter YP_003309987.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: sed:SeD_A2055 DeoR family transcriptional regulator YP_003309988.1 PFAM: aldo/keto reductase; KEGG: ecm:EcSMS35_1420 oxidoreductase, aldo/keto reductase family YP_003309989.1 PFAM: PfkB domain protein; KEGG: ecm:EcSMS35_1419 kinase, PfkB family YP_003309990.1 KEGG: ecf:ECH74115_2497 fructose-bisphosphate aldolase, class II family; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003309991.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ecm:EcSMS35_1417 sorbitol dehydrogenase YP_003309992.1 PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: eum:ECUMN_2064 transporter; MFS superfamily YP_003309993.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: sec:SC1307 hypothetical protein YP_003309994.1 PFAM: carboxymuconolactone decarboxylase; KEGG: dal:Dalk_4415 carboxymuconolactone decarboxylase YP_003309995.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: avn:Avin_02350 MerR family transcriptional regulator YP_003309996.1 PFAM: phosphoglycerate mutase; KEGG: apj:APJL_0235 phosphoglycerate mutase YP_003309997.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: shw:Sputw3181_2860 iron-containing alcohol dehydrogenase YP_003309999.1 KEGG: dac:Daci_4220 hypothetical protein YP_003310000.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: ent:Ent638_4206 outer membrane autotransporter YP_003310001.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: xau:Xaut_2320 MIP family channel protein YP_003310002.1 PFAM: MOSC domain containing protein; KEGG: cff:CFF8240_1502 MOSC domain-containing protein YP_003310003.1 PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family YP_003310004.1 PFAM: cupin; KEGG: dal:Dalk_4094 cupin 2 domain-containing protein YP_003310005.1 KEGG: hypothetical protein YP_003310007.1 PFAM: aldo/keto reductase; KEGG: pmy:Pmen_3155 aldo/keto reductase YP_003310008.1 KEGG: pca:Pcar_1078 flavodoxin YP_003310009.1 PFAM: aldo/keto reductase; KEGG: tau:Tola_1519 aldo/keto reductase YP_003310011.1 PFAM: lytic transglycosylase catalytic; KEGG: tgr:Tgr7_2404 lytic transglycosylase catalytic YP_003310012.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: eci:UTI89_C1627 EntS/YbdA MFS transporter YP_003310013.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cko:CKO_00417 hypothetical protein YP_003310014.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: cvi:CV_2310 PTS system, fructose-like-2 IIB component 1 YP_003310015.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: vcj:VCD_000811 PTS system fructose-specific IIB component/PTS system fructose-specific IIC component YP_003310016.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: vsp:VS_II0606 sugar hydrolase YP_003310017.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: asu:Asuc_1193 DNA-binding transcriptional repressor PurR YP_003310018.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003310019.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: esa:ESA_04299 dehydrogenase YP_003310020.1 KEGG: ABC transporter; K10826 Fe3+-transporting ATPase; K10827 polyamine-transporting ATPase YP_003310021.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: alpha-amylase YP_003310022.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: phosphoglucomutase ; K01840 phosphomannomutase YP_003310024.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: spe:Spro_4278 PTS system mannose/fructose/sorbose family IID component YP_003310025.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: spe:Spro_4279 phosphotransferase system PTS sorbose-specific IIC subunit YP_003310026.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: spe:Spro_4280 PTS system sorbose subfamily IIB component YP_003310027.1 PFAM: PTS system fructose subfamily IIA component; KEGG: hap:HAPS_0189 PTS system, IIA component YP_003310028.1 KEGG: msu:MS0152 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003310029.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: bpy:Bphyt_4951 DeoR family transcriptional regulator YP_003310030.1 KEGG: dat:HRM2_49340 PflC2; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003310031.1 KEGG: tau:Tola_2307 pyruvate formate-lyase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003310032.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: hso:HS_1446 L-fucose operon activator YP_003310035.1 KEGG: glo:Glov_0448 ModD protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase YP_003310036.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dal:Dalk_4087 ABC transporter YP_003310037.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dat:HRM2_01690 molybdenum ABC-type transporter permease subunit YP_003310038.1 KEGG: pca:Pcar_2782 ABC-type transporter, periplasmic component; TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SMART: extracellular solute-binding protein family 3 YP_003310039.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: cha:CHAB381_0628 ABC transporter ATP-binding protein YP_003310040.1 PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: abu:Abu_0339 ABC transporter ATP- binding/permease YP_003310042.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sfu:Sfum_1310 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_003310043.1 KEGG: dps:DP0269 Fe-S oxidoreductase YP_003310044.1 KEGG: dvl:Dvul_1576 hypothetical protein YP_003310045.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: gbm:Gbem_2617 methyltransferase type 11 YP_003310046.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: sfu:Sfum_1313 hypothetical protein YP_003310047.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_0225 Fe-S oxidoreductase YP_003310048.1 KEGG: gme:Gmet_1800 coenzyme F390 synthetase-like YP_003310050.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 outer membrane autotransporter barrel domain protein YP_003310051.1 PFAM: NLPA lipoprotein; KEGG: cje:Cj0772c NlpA family lipoprotein YP_003310052.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: gme:Gmet_2988 cysteine synthase YP_003310053.1 PFAM: iron dependent repressor; FeoA family protein; regulatory protein MarR; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor YP_003310054.1 PFAM: periplasmic solute binding protein; KEGG: tcx:Tcr_2149 periplasmic solute binding protein YP_003310055.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rpe:RPE_2839 ABC transporter YP_003310056.1 PFAM: ABC transporter; KEGG: tcx:Tcr_2147 ABC-type Mn2+/Zn2+ transporters permeases YP_003310057.1 PFAM: ABC transporter; KEGG: tcx:Tcr_2146 hypothetical protein YP_003310058.1 KEGG: viral A-type inclusion protein YP_003310059.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ppr:PBPRB1321 HTH_3family transcriptional regulator YP_003310061.1 KEGG: cbd:CBUD_A0020 hypothetical protein YP_003310062.1 KEGG: cko:CKO_03605 hypothetical protein YP_003310063.1 TIGRFAM: adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: nme:NMB1768 hemagglutinin/hemolysin-related protein YP_003310065.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: hypothetical protein YP_003310067.1 PFAM: acriflavin resistance protein; KEGG: gbm:Gbem_4004 acriflavin resistance protein YP_003310068.1 TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: shl:Shal_3932 RND family efflux transporter MFP subunit YP_003310069.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_3627 outer membrane efflux protein YP_003310070.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_1600 TetR family transcriptional regulator YP_003310071.1 PFAM: chorismate binding-like; KEGG: ccv:CCV52592_1683 anthranilate synthase component 1 (anthranilate synthasecomponent I) YP_003310072.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: cff:CFF8240_0351 anthranilate synthase component II YP_003310073.1 KEGG: cco:CCC13826_0969 anthranilate synthase/para- aminobenzoate synthase glutamine amidotransferase subunit; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003310074.1 PFAM: indole-3-glycerol phosphate synthase; KEGG: abu:Abu_0850 indole-3-glycerol-phosphate synthase YP_003310075.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cco:CCC13826_0970 N- (5'phosphoribosyl)anthranilate isomerase YP_003310076.1 TIGRFAM: tryptophan synthase subunit beta; PFAM: pyridoxal-5'-phosphate-dependent protein subunit beta; KEGG: cco:CCC13826_0972 tryptophan synthase subunit beta YP_003310077.1 KEGG: ccv:CCV52592_1687 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, subunit alpha; PFAM: tryptophan synthase alpha chain YP_003310078.1 PFAM: regulatory protein TetR; KEGG: asu:Asuc_0075 TetR family transcriptional regulator YP_003310079.1 PFAM: NADPH-dependent FMN reductase; KEGG: sat:SYN_02131 iron-sulfur flavoprotein YP_003310080.1 KEGG: vsp:VS_1255 hypothetical protein YP_003310081.1 PFAM: FAD linked oxidase; KEGG: nam:NAMH_0817 glycolate oxidase subunit GlcD YP_003310082.1 KEGG: pca:Pcar_0933 hypothetical protein YP_003310083.1 KEGG: pca:Pcar_0934 hypothetical protein YP_003310084.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sil:SPO1186 TPR domain-containing protein YP_003310085.1 PFAM: amino acid permease-associated region; KEGG: dps:DP0919 proton-linked D-serine/D- alanine/glycine symporter YP_003310086.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: gur:Gura_3726 membrane-associated zinc metalloprotease YP_003310087.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_0168 hypothetical protein YP_003310088.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; KEGG: hso:HS_1489 Cof-like hydrolase YP_003310089.1 PFAM: protein of unknown function DUF552 YP_003310090.1 PFAM: alanine racemase domain protein; KEGG: gsu:GSU2544 hypothetical protein YP_003310091.1 KEGG: gbm:Gbem_3508 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003310092.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: scl:sce4837 phosphoglucomutase/phosphomannomutase YP_003310093.1 PFAM: glycoside hydrolase family 4; KEGG: tau:Tola_2655 maltose-6'-phosphate glucosidase YP_003310094.1 TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: tau:Tola_2656 PTS system, alpha-glucoside- specific IIBC subunit YP_003310095.1 KEGG: ppd:Ppro_3790 initiator RepB protein YP_003310096.1 KEGG: gur:Gura_1554 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003310097.1 KEGG: abu:Abu_0956 hypothetical protein YP_003310098.1 KEGG: dal:Dalk_2332 nitroreductase YP_003310099.1 KEGG: pmu:PM1543 hypothetical protein YP_003310100.1 PFAM: regulatory protein TetR; KEGG: pat:Patl_0736 TetR family transcriptional regulator YP_003310101.1 PFAM: oxidoreductase domain protein; KEGG: eum:ECUMN_2961 dehydrogenase from bacteriophage origin YP_003310102.1 PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: kpn:KPN_02953 glucitol-specific PTS enzyme III YP_003310103.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: asu:Asuc_0436 glucitol/sorbitol-specific PTS system component IIA YP_003310104.1 PFAM: PTS system protein II sorbitol-specific factor; KEGG: kpn:KPN_02951 PTS system glucitol/sorbitol-specific enzyme II YP_003310105.1 KEGG: dynein heavy chain ; K06025 YP_003310107.1 PFAM: endonuclease V; KEGG: pca:Pcar_0602 endonuclease V (deoxyinosine 3'endoduclease) YP_003310108.1 KEGG: pmr:PMI1215 hypothetical protein YP_003310109.1 PFAM: small acid-soluble spore O family protein; KEGG: bgl:bglu_2g15300 uncharacterized MobA-related protein YP_003310110.1 KEGG: dal:Dalk_1092 hypothetical protein YP_003310111.1 KEGG: aci:ACIAD1456 hypothetical protein YP_003310112.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003310113.1 PFAM: YdjC family protein; KEGG: elf:LF82_0294 UPF0249 protein ChbG YP_003310114.1 PFAM: phosphoglycerate mutase; KEGG: asu:Asuc_1383 phosphoglycerate mutase YP_003310115.1 PFAM: glycoside hydrolase family 1; KEGG: aha:AHA_2091 beta-glucosidase YP_003310116.1 PFAM: glycoside hydrolase family 4; KEGG: vsa:VSAL_II1024 6-phospho-beta- glucosidase YP_003310117.1 KEGG: kpn:KPN_04650 phosphotransferase protein; TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003310118.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: tau:Tola_0449 phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha YP_003310119.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: spe:Spro_4224 phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003310120.1 PFAM: initiator RepB protein; KEGG: hypothetical protein YP_003310121.1 PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein YP_003310122.1 PFAM: penicillin-binding protein transpeptidase; peptidase M56 BlaR1; KEGG: abu:Abu_1478 beta-lactamase YP_003310123.1 PFAM: Penicillinase repressor; KEGG: saz:Sama_3341 CopY family transcriptional regulator YP_003310124.1 PFAM: penicillin-binding protein transpeptidase; KEGG: gur:Gura_3505 beta-lactamase YP_003310125.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: elf:LF82_p222 EntS EntS/YbdA MFS transporter YP_003310126.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: pae:PA3134 glutamyl-tRNA synthetase YP_003310127.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: maq:Maqu_3853 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003310128.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003310129.1 PFAM: manganese and iron superoxide dismutase; KEGG: hypothetical protein YP_003310130.1 PFAM: transcriptional regulator; KEGG: pca:Pcar_3081 two component signal transduction response regulator YP_003310131.1 KEGG: dps:DP2935 hypothetical protein YP_003310133.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: gur:Gura_4252 leucyl aminopeptidase YP_003310134.1 PFAM: transketolase; transketolase central region; KEGG: cko:CKO_00493 hypothetical protein YP_003310135.1 PFAM: transketolase; KEGG: efe:EFER_0869 carbohydrate degradation enzyme YP_003310136.1 PFAM: sugar-specific permease SgaT/UlaA; KEGG: ent:Ent638_2844 ascorbate-specific PTS system enzyme IIC YP_003310137.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: seg:SG2372 sugar phosphotransferase component II B YP_003310138.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pmr:PMI1777 PTS system EIIA component YP_003310139.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix Mga DNA-binding trans-acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003310140.1 PFAM: protein of unknown function DUF1311; KEGG: vpa:VP1847 hypothetical protein YP_003310141.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: smt:Smal_0854 outer membrane autotransporter barrel domain protein YP_003310146.1 KEGG: sed:SeD_A1350 periplasmic phosphate- binding protein YP_003310147.1 KEGG: sed:SeD_A1350 periplasmic phosphate- binding protein YP_003310148.1 PFAM: aminotransferase class I and II; KEGG: similar to aminotransferase YP_003310149.1 KEGG: ppf:Pput_3958 hypothetical protein YP_003310150.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (class B); KEGG: msu:MS1438 hypothetical protein YP_003310151.1 PFAM: peptidase M18 aminopeptidase I; KEGG: net:Neut_1358 aminopeptidase 2 YP_003310152.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: tau:Tola_0287 1-phosphofructokinase YP_003310153.1 KEGG: vvy:VVA1509 tagatose-bisphosphate aldolase; TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003310154.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: hsm:HSM_1035 alcohol dehydrogenase YP_003310155.1 TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; KEGG: kpn:KPN_03550 PTS family enzyme IIC, galactitol-specific YP_003310156.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: hsm:HSM_1032 PTS IIA-like nitrogen- regulatory protein PtsN YP_003310157.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: kpn:KPN_03549 galactitol-specific PTS system component IIB YP_003310158.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hsm:HSM_1036 DeoR family transcriptional regulator YP_003310160.1 KEGG: conserved hypothetical protein YP_003310161.1 TIGRFAM: outer membrane autotransporter barrel domain protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; KEGG: smt:Smal_0854 outer membrane autotransporter barrel domain protein YP_003310162.1 KEGG: ppw:PputW619_5168 hypothetical protein YP_003310163.1 KEGG: sbp:Sbal223_2562 hypothetical protein YP_003310164.1 KEGG: cjd:JJD26997_1249 serine acetyltransferase YP_003310165.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sat:SYN_01968 sodium driven multidrug efflux pump YP_003310166.1 PFAM: PTS system fructose subfamily IIA component; KEGG: vvy:VV0540 phosphotransferase system, mannose/fructose-specific component IIA YP_003310167.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ecl:EcolC_0558 PTS system mannose/fructose/sorbose family IID subunit YP_003310168.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: ent:Ent638_3580 N-acetylgalactosamine- specific PTS system transporter subunit IIC YP_003310169.1 KEGG: ecg:E2348C_3424 N-acetylgalactosamine- specific PTS system transporter subunit IIB; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIsubunit beta; PFAM: PTS system sorbose subfamily IIB component YP_003310170.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: plu:plu0837 PTS system, N-acetylgalactosamine- specific IID component (EIID-AGA) (N-acetylgalactosamine- permease IID component) (phosphotransferase enzyme II, D component) YP_003310171.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: plu:plu0836 PTS system, N-acetylgalactosamine- specific IIC component 1 (EIIC-AGA) (N-acetylgalactosamine- permease IIC component 1) YP_003310172.1 KEGG: ftn:FTN_1149 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003310173.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: abc:ACICU_00683 hypothetical protein YP_003310174.1 KEGG: hypothetical protein YP_003310175.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: pol:Bpro_1286 alcohol dehydrogenase GroES- like YP_003310176.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIsubunit beta; phosphotransferase system EIIC; KEGG: tau:Tola_0286 PTS system, fructose subfamily, IIC subunit YP_003310177.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vvy:VVA0188 PTS system, fructose-specific IIABC component YP_003310178.1 KEGG: deoxyribose-phosphate aldolase ; K01619 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003310179.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: pin:Ping_0089 mannitol-1-phosphate 5- dehydrogenase YP_003310180.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mmw:Mmwyl1_1647 GntR family transcriptional regulator YP_003310181.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pmr:PMI3612 MarR-family transcriptional regulator YP_003310183.1 PFAM: regulatory protein TetR; KEGG: dps:DP2124 transcriptional regulator YP_003310184.1 KEGG: smd:Smed_3790 hypothetical protein YP_003310185.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfu:Sfum_3496 ABC transporter YP_003310186.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: vfi:VF_A1090 ABC transporter permease YP_003310187.1 KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component YP_003310188.1 PFAM: extracellular solute-binding protein family 1; KEGG: cjj:CJJ81176_0750 ABC transporter periplasmic substrate-binding protein YP_003310189.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cak:Caul_4076 phosphotransferase domain- containing protein YP_003310190.1 PFAM: aminotransferase class-III; KEGG: vvy:VVA0475 4-aminobutyrate aminotransferase YP_003310191.1 KEGG: abb:ABBFA_002146 phosphonoacetaldehyde hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase YP_003310192.1 TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: aminotransferase class V; KEGG: abc:ACICU_01380 serine-pyruvate aminotransferase/aspartate aminotransferase YP_003310193.1 KEGG: hypothetical protein YP_003310194.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: vpa:VP1640 hypothetical protein YP_003310196.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: aha:AHA_2339 fructose permease IID component YP_003310197.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: spe:Spro_4279 phosphotransferase system PTS sorbose-specific IIC subunit YP_003310198.1 KEGG: spe:Spro_4280 PTS system sorbose subfamily IIB component YP_003310199.1 PFAM: PTS system fructose subfamily IIA component; KEGG: kpn:KPN_00552 transporter, PTS system YP_003310200.1 PFAM: hypothetical protein; KEGG: predicted protein; K07052 YP_003310201.1 KEGG: tau:Tola_1979 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: ribose/galactose isomerase YP_003310202.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: ppr:PBPRA2109 LacI family transcriptional regulator YP_003310204.1 KEGG: viral A-type inclusion protein YP_003310205.1 KEGG: scl:sce5277 hypothetical protein YP_003310206.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310207.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003310210.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family YP_003310211.1 PFAM: aldo/keto reductase; KEGG: prostaglandin f2-alpha synthase YP_003310212.1 PFAM: helix-turn-helix HxlR type; KEGG: dde:Dde_1352 transcriptional regulator YP_003310213.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: shl:Shal_2879 LuxR family transcriptional regulator YP_003310214.1 KEGG: ecw:EcE24377A_3199 carbamate kinase; TIGRFAM: carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003310215.1 KEGG: pcr:Pcryo_0822 peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase YP_003310216.1 PFAM: amino acid permease-associated region; KEGG: pla:Plav_1143 amino acid permease-associated region YP_003310217.1 KEGG: pla:Plav_1142 putrescine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003310218.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ara:Arad_8181 ribose ABC transporter YP_003310219.1 PFAM: inner-membrane translocator; KEGG: vvu:VV2_0063 ribose ABC transporter permease YP_003310220.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hap:HAPS_1727 ABC D-ribose transporter ATP binding protein RbsA YP_003310221.1 KEGG: similar to sds22 CG5851-PA YP_003310222.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: hypothetical protein YP_003310223.1 PFAM: ROK family protein; KEGG: yen:YE2511 hypothetical protein YP_003310224.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: hip:CGSHiEE_02055 L-fucose isomerase YP_003310225.1 PFAM: ribose/galactose isomerase; KEGG: nam:NAMH_1207 ribose 5-phosphate isomerase B YP_003310226.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase; KEGG: ecc:c5096 ribose-5-phosphate isomerase B YP_003310227.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIsubunit alpha; KEGG: plu:plu2756 PTS system, cellobiose-specific IIA component (EIIA-CEL) (cellobiose-permease IIA component) (phosphotransferase enzyme II, A component) (EIII-CEL) YP_003310228.1 KEGG: vvy:VV2900 phosphotransferase system cellobiose-specific component IIC; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PTS system, lactose/cellobiose family IIsubunit beta; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003310229.1 KEGG: vfm:VFMJ11_0619 beta-glucosidase A; TIGRFAM: 6-phospho-beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003310233.1 PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein; KEGG: sfu:Sfum_1846 PAS/PAC sensor protein YP_003310234.1 PFAM: stage II sporulation E family protein; KEGG: pca:Pcar_0518 hypothetical protein YP_003310235.1 PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP2379 hydrogenase YP_003310236.1 PFAM: phosphoglycerate mutase; KEGG: apj:APJL_0235 phosphoglycerate mutase YP_003310237.1 PFAM: glycoside hydrolase family 1; KEGG: ecv:APECO1_3626 6-phospho-beta-glucosidase BglA YP_003310238.1 TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIsubunit alpha; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: asu:Asuc_0975 PTS system, beta-glucoside- specific IIABC subunit YP_003310239.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA0858 beta-glucoside operon antiterminator YP_003310241.1 KEGG: spc:Sputcn32_1424 hypothetical protein YP_003310242.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: see:SNSL254_A3874 GntR family regulatory protein YP_003310243.1 PFAM: sugar isomerase (SIS); KEGG: sea:SeAg_B3807 sugar isomerase YP_003310244.1 PFAM: PTS system fructose subfamily IIA component; KEGG: kpe:KPK_4812 PTS system, IIA component YP_003310245.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: kpn:KPN_04803 PTS permease YP_003310246.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: kpn:KPN_04804 PTS permease YP_003310247.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: kpe:KPK_4809 PTS system, IID component YP_003310248.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: gsu:GSU2787 LysR family transcriptional regulator YP_003310249.1 PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: cjd:JJD26997_1454 IclR family transcriptional regulator YP_003310250.1 KEGG: avn:Avin_09150 RhaT L-rhamnose-proton symport 2 YP_003310251.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: sgl:SG0171 hypothetical protein YP_003310252.1 PFAM: amidohydrolase 2; KEGG: rec:RHECIAT_PA0000354 amidohydrolase protein YP_003310253.1 PFAM: protein of unknown function DUF718; KEGG: sgl:SG0170 hypothetical protein YP_003310254.1 PFAM: dihydrodipicolinate synthetase; KEGG: smd:Smed_3832 N-acetylneuraminate lyase YP_003310255.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_2273 hypothetical protein YP_003310256.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F YP_003310257.1 PFAM: MaoC domain protein dehydratase; KEGG: oan:Oant_0316 MaoC domain protein dehydratase YP_003310258.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: met:M446_1209 hypothetical protein YP_003310259.1 KEGG: reu:Reut_A2824 NapD-like protein YP_003310261.1 KEGG: bba:Bd2899 protoporphyrinogen oxidase YP_003310262.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tau:Tola_0789 LysR family transcriptional regulator YP_003310263.1 PFAM: Chromate transporter; KEGG: bba:Bd1832 chromate transporter YP_003310264.1 PFAM: Chromate transporter; KEGG: geo:Geob_1961 chromate transporter YP_003310265.1 KEGG: esa:ESA_04138 hypothetical protein YP_003310266.1 PFAM: aldo/keto reductase; KEGG: asu:Asuc_1306 aldo/keto reductase YP_003310267.1 PFAM: protein of unknown function DUF523; KEGG: abm:ABSDF3599 hypothetical protein YP_003310268.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: sat:SYN_00402 deoxyribodipyrimidine photolyase YP_003310269.1 PFAM: choloylglycine hydrolase; KEGG: bba:Bd0665 choloylglycine hydrolase YP_003310270.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: cha:CHAB381_0246 membrane protein YP_003310271.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msu:MS0597 GloA protein YP_003310272.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppr:PBPRB1386 iron-sulfur cluster-binding protein YP_003310274.1 KEGG: hypothetical protein YP_003310275.1 PFAM: lipocalin; Lipocalin-related protein and Bos/Can/Equ allergen; KEGG: tau:Tola_1068 lipocalin family protein YP_003310276.1 PFAM: conserved hypothetical protein; KEGG: bja:blr3189 hypothetical protein YP_003310277.1 KEGG: saz:Sama_0340 hypothetical protein YP_003310278.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mmw:Mmwyl1_0265 MarR family transcriptional regulator YP_003310279.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bam:Bamb_1999 ABC transporter YP_003310280.1 PFAM: beta-lactamase; KEGG: cti:RALTA_A3127 enzyme with 2 metallo-hydrolase/oxidoreductase domains, 2 TPR-like domains, sterol carrier protein domain; similar to E.coli YjcS, annotated alkyl sulfatase YP_003310281.1 PFAM: regulatory protein TetR; KEGG: vfm:VFMJ11_2653 TetR family transcriptional regulator YP_003310282.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310286.1 PFAM: citrate transporter; KEGG: nam:NAMH_0449 inner membrane protein YbiR YP_003310287.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: scl:sce2755 ferredoxin YP_003310288.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: abc:ACICU_01753 oxidoreductase YP_003310290.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mes:Meso_3221 MarR family transcriptional regulator YP_003310291.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vsp:VS_2724 hypothetical protein YP_003310292.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_3627 DNA gyrase inhibitor YP_003310293.1 PFAM: hypothetical protein; Sel1 domain protein repeat-containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L) YP_003310296.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: abb:ABBFA_001274 methionine import ATP- binding protein MetN YP_003310297.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yen:YE4182 ABC transporter permease YP_003310298.1 PFAM: NLPA lipoprotein; KEGG: bxe:Bxe_A4158 ABC transporter periplasmic ligand-binding protein YP_003310299.1 TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: eca:ECA2964 peptidase YP_003310300.1 KEGG: xau:Xaut_0833 hypothetical protein YP_003310301.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: abu:Abu_1769 flavodoxin YP_003310302.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvm:DvMF_1122 serine-type D-Ala-D-Ala carboxypeptidase YP_003310303.1 PFAM: PfkB domain protein; KEGG: sbo:SBO_3129 carbohydrate kinase YP_003310304.1 PFAM: inner-membrane translocator; KEGG: ecv:APECO1_3187 ribose transporter permease RbsC YP_003310305.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmw:Mmwyl1_3109 ABC transporter YP_003310306.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: oan:Oant_0292 monosaccharide-transporting ATPase YP_003310307.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vei:Veis_0525 periplasmic binding protein/LacI transcriptional regulator YP_003310309.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ccv:CCV52592_1481 hypothetical protein YP_003310310.1 KEGG: bba:Bd2324 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase; helicase; type III restriction protein res subunit; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase domain protein YP_003310311.1 KEGG: har:HEAR3087 hypothetical protein YP_003310312.1 PFAM: protein of unknown function DUF28; KEGG: sfu:Sfum_0996 protein of unknown function DUF28 YP_003310313.1 PFAM: hypothetical protein; TPR repeat-containing protein; SMART: hypothetical protein; KEGG: SLEI family protein YP_003310314.1 PFAM: hypothetical protein; NSF attachment protein; hypothetical protein; SMART: Tetratricopeptide domain protein; KEGG: TPR Domain containing protein YP_003310315.1 PFAM: class II aldolase/adducin family protein; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase YP_003310316.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: kpe:KPK_4469 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_003310317.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: oan:Oant_4119 PTS system galactitol-specific IIC component YP_003310318.1 KEGG: oan:Oant_4121 phosphotransferase system lactose/cellobiose-specific IIsubunit beta YP_003310319.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003310320.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; Helix- turn-helix type 11 domain protein; M trans-acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003310321.1 PFAM: cation transporter; KEGG: dat:HRM2_16340 TrkB YP_003310322.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: hha:Hhal_1068 methyltransferase type 11 YP_003310323.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: ftn:FTN_1738 metallocarboxypeptidase YP_003310325.1 KEGG: ecl:EcolC_3080 hypothetical protein YP_003310326.1 PFAM: protein of unknown function DUF502; KEGG: abo:ABO_2456 hypothetical protein YP_003310327.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: afw:Anae109_0766 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003310328.1 TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase; KEGG: mxa:MXAN_4159 uridine kinase YP_003310329.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ara:Arad_3946 transcriptional regulator protein YP_003310330.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsa:VSAL_II0894 PTS system, IIBC component YP_003310332.1 KEGG: dat:HRM2_37860 DraG2 YP_003310333.1 KEGG: acp:A2cp1_3952 hypothetical protein YP_003310335.1 TIGRFAM: Mn2+/Fe2+ transporter NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bcs:BCAN_A1474 manganese transporter MntH YP_003310336.1 PFAM: zinc/iron permease; KEGG: dat:HRM2_24600 ZupT YP_003310337.1 PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor YP_003310339.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003310342.1 KEGG: pfl:PFL_0345 hypothetical protein YP_003310343.1 PFAM: UvrD/REP helicase; KEGG: cff:CFF8240_0386 ATP-dependent DNA helicase UvrD YP_003310344.1 TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_2314 drug resistance transporter EmrB/QacA subfamily YP_003310345.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: scl:sce4177 phosphoenolpyruvate synthase YP_003310347.1 PFAM: NUDIX hydrolase; KEGG: xfm:Xfasm12_0596 7,8-dihydro-8-oxoguanine- triphosphatase YP_003310348.1 KEGG: cff:CFF8240_0385 hypothetical protein YP_003310349.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ppr:PBPRB1970 hypothetical protein YP_003310350.1 PFAM: helix-turn-helix HxlR type; KEGG: dde:Dde_1352 transcriptional regulator YP_003310351.1 KEGG: CENPE; centromere protein E, 312kDa ; K11498 centromeric protein E YP_003310352.1 PFAM: Domain of unknown function DUF1848; KEGG: msu:MS2157 hypothetical protein YP_003310353.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: hsm:HSM_1737 MarR family transcriptional regulator YP_003310354.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: cla:Cla_0049 anaerobic ribonucleoside triphosphate reductase activating protein YP_003310355.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: cla:Cla_0048 anaerobic ribonucleoside triphosphate reductase YP_003310356.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: vsp:VS_II0606 sugar hydrolase YP_003310357.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIsubunit alpha; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIsubunit beta; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vsp:VS_II0605 PTS family enzyme IIA YP_003310358.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: esa:ESA_02618 DNA-binding transcriptional repressor MngR YP_003310362.1 KEGG: msu:MS1478 PfoR protein YP_003310363.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein YP_003310364.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: pca:Pcar_1846 NADP-reducing hydrogenase chain A YP_003310365.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ppd:Ppro_3516 NADH dehydrogenase (quinone) YP_003310366.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pca:Pcar_1605 NAD-reducing iron-only hydrogenase large subunit YP_003310367.1 KEGG: ccv:CCV52592_0612 glycerate kinase 1; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003310368.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: seg:SG1499 GntR-family regulatory protein YP_003310369.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mfa:Mfla_0771 ADP-glyceromanno-heptose 6- epimerase precursor YP_003310370.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: pca:Pcar_0779 hypothetical protein YP_003310371.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dvl:Dvul_2305 phosphotransferase domain- containing protein YP_003310372.1 TIGRFAM: preprotein translocase, Secsubunit alpha; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: gme:Gmet_0951 preprotein translocase subunit SecA YP_003310376.1 PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dde:Dde_3291 MerR family transcriptional regulator YP_003310377.1 KEGG: Os04g0671700; hypothetical protein YP_003310378.1 PFAM: nitroreductase; KEGG: pag:PLES_27191 nitroreductase YP_003310379.1 PFAM: protein of unknown function UPF0074; KEGG: ccv:CCV52592_1447 RRF2 family protein YP_003310380.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase YP_003310381.1 KEGG: dps:DP0755 serine protease DegQ [precursor]; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_003310382.1 KEGG: ecx:EcHS_A3902 oxidoreductase YP_003310385.1 PFAM: methyltransferase small; KEGG: rma:Rmag_0388 methyltransferase small YP_003310386.1 PFAM: protein of unknown function DUF124; KEGG: eba:p1B313 hypothetical protein YP_003310388.1 KEGG: swd:Swoo_0259 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003310389.1 PFAM: protein of unknown function DUF1355; KEGG: sec:SC3478 cytoplasmic protein YP_003310390.1 TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: hypothetical protein YP_003310391.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: eum:ECUMN_2498 ribonucleoside hydrolase 2 YP_003310392.1 PFAM: inner-membrane translocator; KEGG: smd:Smed_3657 inner-membrane translocator YP_003310393.1 PFAM: inner-membrane translocator; KEGG: smd:Smed_3656 inner-membrane translocator YP_003310394.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tau:Tola_1373 ABC transporter YP_003310395.1 PFAM: basic membrane lipoprotein; KEGG: bba:Bd0445 ABC-type transporter substrate-binding protein YP_003310396.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: pfs:PFLU4156 ribokinase YP_003310397.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: vcm:VCM66_1661 LacI family transcriptional regulator YP_003310398.1 PFAM: glycosyl transferase group 1; KEGG: dde:Dde_1852 1,2-diacylglycerol 3- glucosyltransferase YP_003310399.1 PFAM: glycosyl transferase group 1; KEGG: ilo:IL0120 membrane-associated protein YP_003310400.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pca:Pcar_1245 permease YP_003310401.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: shl:Shal_2747 short-chain dehydrogenase/reductase SDR YP_003310402.1 TIGRFAM: lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mmw:Mmwyl1_0638 lipoprotein A YP_003310403.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, subunit beta; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: ppd:Ppro_0548 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_003310404.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dps:DP2103 2-oxoacid ferredoxin oxidoreductase, subunit alpha YP_003310405.1 SMART: hypothetical protein; KEGG: gur:Gura_0105 hypothetical protein YP_003310406.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: maq:Maqu_3541 protein of unknown function DUF306, MetA and HslJ YP_003310407.1 KEGG: DNA-3-methyladenine glycosylase family protein ; K03652 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_003310408.1 KEGG: hiq:CGSHiGG_10215 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_003310409.1 PFAM: protein of unknown function DUF208; KEGG: pmu:PM0345 hypothetical protein YP_003310411.1 PFAM: hypothetical protein; regulatory protein DeoR; KEGG: hypothetical protein YP_003310413.1 PFAM: protein of unknown function UPF0005; KEGG: sun:SUN_1409 hypothetical protein YP_003310416.1 KEGG: amc:MADE_01097 DNA polymerase III subunits gamma and tau YP_003310417.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: bba:Bd0211 rod shape-determining protein MreB YP_003310418.1 KEGG: geo:Geob_0551 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M) YP_003310419.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: gur:Gura_4163 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase YP_003310420.1 KEGG: gme:Gmet_2974 MutS 2 protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS; Smr protein/MutS2; MutS III domain protein YP_003310421.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rso:RSp1286 DNA-binding sucrose operon transcriptional repressor transcription regulator protein YP_003310422.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vco:VC0395_0597 PTS system, sucrose-specific IIBC component YP_003310423.1 KEGG: spe:Spro_4206 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_003310424.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: pca:Pcar_1289 50S ribosomal protein L28 YP_003310425.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: cko:CKO_04538 hypothetical protein YP_003310426.1 PFAM: glycoside hydrolase family 4; KEGG: eca:ECA1847 6-phospho-alpha-glucosidase YP_003310427.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: pmr:PMI2983 phosphosugar isomerase/binding protein YP_003310431.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rma:Rmag_0470 serine-type D-Ala-D-Ala carboxypeptidase YP_003310432.1 KEGG: bba:Bd0591 endo III-related endonuclease; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein YP_003310434.1 PFAM: protein of unknown function UPF0029; KEGG: ftn:FTN_0466 hypothetical protein YP_003310435.1 PFAM: peptidase M50; KEGG: geo:Geob_3017 peptidase M50 YP_003310436.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase; KEGG: ppr:PBPRB0932 hypothetical protein YP_003310437.1 TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: sat:SYN_02533 metallo-beta-lactamase superfamily protein YP_003310439.1 KEGG: geo:Geob_2324 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; SMART: DNA-binding protein YP_003310440.1 KEGG: gbm:Gbem_0275 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_003310441.1 PFAM: protein of unknown function DUF156; KEGG: nmu:Nmul_A2278 hypothetical protein YP_003310442.1 TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; haloacid dehalogenase; KEGG: abu:Abu_0480 heavy-metal transporting P-type ATPase YP_003310443.1 KEGG: smt:Smal_2109 protein tyrosine/serine phosphatase YP_003310445.1 KEGG: conserved hypothetical protein YP_003310446.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlt:Rleg2_4304 glyoxalase/bleomycin resistance protein/dioxygenase YP_003310447.1 PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: glo:Glov_2276 redoxin domain protein YP_003310448.1 PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: gbm:Gbem_4010 redoxin domain protein YP_003310449.1 PFAM: cupin; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_0980 XRE family transcriptional regulator YP_003310450.1 PFAM: patatin; KEGG: swd:Swoo_0323 patatin YP_003310451.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: abn:AB57_2551 two-component heavy metal response regulator protein YP_003310452.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: abu:Abu_0433 two-component sensor histidine kinase YP_003310453.1 PFAM: lipid A biosynthesis domain protein; KEGG: pca:Pcar_1272 hypothetical protein YP_003310454.1 PFAM: glycosyl transferase family 39; KEGG: abc:ACICU_02868 4-amino-4-deoxy-L-arabinose transferase YP_003310455.1 PFAM: glycosyl transferase family 2; KEGG: pca:Pcar_1271 glycosyltransferase YP_003310456.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: amc:MADE_01775 probable alkyl hydroperoxide reductase subunit F YP_003310458.1 PFAM: diacylglycerol kinase; SMART: diacylglycerol kinase; KEGG: cko:CKO_00697 lipid kinase YP_003310460.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vha:VIBHAR_02481 hypothetical protein YP_003310461.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ppr:PBPRB0146 PTS permease YP_003310462.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: ecl:EcolC_0558 PTS system mannose/fructose/sorbose family IID subunit YP_003310463.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: ecr:ECIAI1_3289 N-acetylgalactosamine- specific PTS system transporter subunit IIC YP_003310464.1 KEGG: ecy:ECSE_3424 PTS system N- acetylgalactosamine-specific IIB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIsubunit beta; PFAM: PTS system sorbose subfamily IIB component YP_003310465.1 PFAM: initiator RepB protein; KEGG: hypothetical protein YP_003310466.1 KEGG: ftn:FTN_1149 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003310467.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: swp:swp_4289 glucosamine-6-phosphate isomerase YP_003310468.1 KEGG: vpa:VPA1567 pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003310469.1 KEGG: ecc:c4538 pyruvate formate-lyase 3 activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: radical SAM protein YP_003310470.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: hap:HAPS_0195 transcriptional repressor AgaR/DNA-binding transcriptional dual regulator YP_003310471.1 PFAM: LytTr DNA-binding region; KEGG: pca:Pcar_0056 response regulator YP_003310472.1 KEGG: pub:SAR11_0542 unknown membrane protein YP_003310473.1 PFAM: MltA-interacting MipA family protein; KEGG: tgr:Tgr7_2586 scaffolding protein for murein- synthesizing holoenzyme outermembrane protein YP_003310474.1 PFAM: regulatory protein TetR; KEGG: aby:ABAYE3323 TetR family transcriptional regulator YP_003310475.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310479.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbp:Sbal223_0116 glyoxalase/bleomycin resistance protein/dioxygenase YP_003310480.1 PFAM: GCN5-related N-acetyltransferase YP_003310481.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hsm:HSM_1036 DeoR family transcriptional regulator YP_003310482.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003310484.1 KEGG: bba:Bd3854 hypothetical protein; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003310485.1 PFAM: PTS system Galactitol-specific IIC component; KEGG: ecv:APECO1_2969 PTS system, galactitol- specific IIC component YP_003310486.1 PFAM: aldo/keto reductase; KEGG: tau:Tola_0803 aldo/keto reductase YP_003310487.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: ecm:EcSMS35_3768 PEP-dependent sugar transporting PTS family, IIB component YP_003310488.1 PFAM: regulatory protein TetR; KEGG: dal:Dalk_0727 TetR family transcriptional regulator YP_003310489.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310490.1 PFAM: sugar-binding domain protein; KEGG: vsa:VSAL_II0455 HTH-type transcriptional regulator YP_003310491.1 PFAM: hypothetical protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat- containing protein; SMART: hypothetical protein; Sel1 domain protein repeat-containing protein; KEGG: similar to Sel-1 homolog precursor (Suppressor of lin-12-like protein) (Sel-1L) YP_003310493.1 PFAM: lipolytic protein G-D-S-L family; KEGG: spe:Spro_2269 GDSL family lipase YP_003310494.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8 YP_003310495.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sat:SYN_00652 MarR family transcriptional regulator YP_003310496.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003310497.1 KEGG: dds:Ddes_2145 hypothetical protein YP_003310498.1 KEGG: dal:Dalk_1127 hypothetical protein YP_003310499.1 PFAM: inosine/uridine-preferring nucleoside hydrolase; KEGG: elf:LF82_1884 pyrimidine-specific ribonucleoside hydrolase RihB YP_003310500.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: ecm:EcSMS35_2310 regulatory protein Nsr YP_003310503.1 KEGG: ecl:EcolC_3080 hypothetical protein YP_003310505.1 TIGRFAM: uracil-DNA glycosylase; PFAM: uracil-DNA glycosylase superfamily; KEGG: ilo:IL0522 uracil-DNA glycosylase YP_003310510.1 PFAM: BioY protein; KEGG: mes:Meso_0776 BioY protein YP_003310511.1 PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; phosphopantetheine- binding; SMART: phospholipid/glycerol acyltransferase; KEGG: hha:Hhal_0052 AMP-dependent synthetase and ligase YP_003310513.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: sec:SC1613 ribulose-phosphate 3-epimerase YP_003310514.1 PFAM: photosystem I assembly BtpA; KEGG: stt:t1524 hypothetical protein YP_003310515.1 TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; KEGG: eum:ECUMN_4903 phosphotransferase enzyme IIC component; KpLE2 phage-like element YP_003310516.1 PFAM: phosphotransferase system lactose/cellobiose- specific IIsubunit beta; KEGG: eum:ECUMN_4904 enzyme IIB component of PTS; KpLE2 phage-like element YP_003310517.1 PFAM: peptidase M42 family protein; KEGG: seg:SG1511 hypothetical protein YP_003310518.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: oan:Oant_4120 PTS IIA-like nitrogen- regulatory protein PtsN YP_003310519.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; M trans-acting positive regulator; hypothetical protein; PRD domain protein; KEGG: yen:YE3777 transcriptional regulator YP_003310521.1 PFAM: Barstar (barnase inhibitor); KEGG: pfl:PFL_2382 ribonuclease inhibitor YP_003310523.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIsubunit alpha; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIsubunit beta; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: dno:DNO_0610 PTS system, fructose IIC subunit YP_003310524.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: dat:HRM2_08650 PfkB1 YP_003310525.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: hap:HAPS_0195 transcriptional repressor AgaR/DNA-binding transcriptional dual regulator YP_003310526.1 PFAM: Ham1 family protein; KEGG: bja:bll0673 deoxyribonucleotide triphosphate pyrophosphatase YP_003310527.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_0626 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_003310530.1 TIGRFAM: transketolase; PFAM: transketolase central region; transketolase; KEGG: dat:HRM2_48140 Tkt1 YP_003310531.1 PFAM: glucitol operon activator; KEGG: asa:ASA_3579 glucitol/sorbitol operon activator YP_003310532.1 PFAM: sugar-binding domain protein; KEGG: yen:YE0815 transcriptional regulatory protein YP_003310533.1 KEGG: asu:Asuc_0554 lipoyltransferase and lipoate- protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase YP_003310534.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; biotin/lipoyl attachment domain-containing protein; KEGG: pla:Plav_3138 dihydrolipoamide dehydrogenase YP_003310535.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: dat:HRM2_47640 PdhC YP_003310536.1 PFAM: transketolase; transketolase domain protein; KEGG: dat:HRM2_47610 PdhB YP_003310537.1 PFAM: dehydrogenase E1 component; KEGG: oan:Oant_4117 pyruvate dehydrogenase (acetyl- transferring) YP_003310539.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: kpe:KPK_3429 PTS system, glucitol/sorbitol- specific IIA component YP_003310540.1 PFAM: Sorbitol phosphotransferase protein II domain protein; KEGG: oan:Oant_4110 protein-N(pi)-phosphohistidine-- sugar phosphotransferase YP_003310541.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: vei:Veis_2225 PTS system, glucitol/sorbitol- specific, IIC subunit YP_003310542.1 PFAM: SAF domain protein; KEGG: vei:Veis_2231 homoserine dehydrogenase, NAD- binding YP_003310543.1 KEGG: dal:Dalk_2955 histidinol phosphate phosphatase HisJ family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_003310544.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: gur:Gura_4253 hydrolase YP_003310545.1 KEGG: elongation factor g ; K02355 elongation factor EF-G YP_003310546.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: vfm:VFMJ11_1266 1,3-propanediol dehydrogenase YP_003310547.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_1665 alpha/beta hydrolase domain- containing protein YP_003310548.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein YP_003310549.1 PFAM: extracellular solute-binding protein family 1; KEGG: ent:Ent638_3292 extracellular solute-binding protein YP_003310550.1 PFAM: class II aldolase/adducin family protein; KEGG: msu:MS2327 rhamnulose-1-phosphate aldolase YP_003310551.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: tau:Tola_1040 L-rhamnose 1-epimerase YP_003310552.1 KEGG: sek:SSPA3617 L-rhamnose isomerase; TIGRFAM: L-rhamnose isomerase; PFAM: L-rhamnose isomerase YP_003310553.1 KEGG: tau:Tola_1043 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: carbohydrate kinase FGGY YP_003310554.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: hso:HS_0226 LacI family transcription regulator YP_003310555.1 KEGG: mxa:MXAN_1783 hypothetical protein YP_003310556.1 KEGG: hhe:HH1031 flavodoxin YP_003310557.1 KEGG: ank:AnaeK_3353 hypothetical protein YP_003310558.1 PFAM: carboxymuconolactone decarboxylase; KEGG: gur:Gura_4370 cupin 2 domain-containing protein YP_003310559.1 PFAM: peptidoglycan-binding protein; KEGG: sme:SMc04024 membrane-bound lytic murein transglycosylase protein YP_003310563.1 KEGG: efe:EFER_0533 hypothetical protein YP_003310564.1 KEGG: nam:NAMH_0521 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; Rho termination factor RNA- binding; SMART: Cold shock protein; ATPase AAA YP_003310565.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_1954 alpha amylase, catalytic region YP_003310566.1 KEGG: cbc:CbuK_1268 tRNA 2-methylthioadenosine synthase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; radical SAM protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB YP_003310568.1 KEGG: hypothetical protein ; K03469 ribonuclease HI YP_003310569.1 KEGG: abu:Abu_1740 FUR family transcriptional regulator YP_003310570.1 PFAM: periplasmic solute binding protein; KEGG: cco:CCC13826_1793 carbon storage regulator-like protein YP_003310571.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: abu:Abu_0554 ABC transporter ATP-binding protein YP_003310572.1 PFAM: ABC transporter; KEGG: cco:CCC13826_1789 oligoendopeptidase F YP_003310573.1 PFAM: ferritin; KEGG: cha:CHAB381_0992 DNA protection during starvation protein YP_003310574.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase YP_003310575.1 KEGG: pca:Pcar_1078 flavodoxin YP_003310576.1 PFAM: protein of unknown function DUF1003; KEGG: abn:AB57_0131 hypothetical protein YP_003310577.1 PFAM: protein of unknown function DUF541; KEGG: mxa:MXAN_7203 28 kDa outer membrane protein YP_003310578.1 PFAM: protein of unknown function DUF541; KEGG: hypothetical protein YP_003310579.1 PFAM: protein of unknown function DUF541; KEGG: hypothetical protein YP_003310584.1 KEGG: eta:ETA_06750 hypothetical protein YP_003310585.1 KEGG: aav:Aave_4488 hypothetical protein YP_003310587.1 KEGG: dps:DP2869 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003310588.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF- family domain protein; KEGG: gur:Gura_2321 carbohydrate kinase, YjeF related protein YP_003310589.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: gbm:Gbem_0781 iron-containing alcohol dehydrogenase YP_003310590.1 PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dps:DP1820 multidrug ABC transporter YP_003310592.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003310593.1 KEGG: wpi:WPa_0933 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase YP_003310594.1 KEGG: ppd:Ppro_1376 alkaline phosphatase; PFAM: alkaline phosphatase; SMART: alkaline phosphatase YP_003310595.1 PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: dps:DP0195 multidrug-efflux transporter gene transcriptional regulator YP_003310596.1 PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 hypothetical protein YP_003310597.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3046 phosphotransferase system, EIIC YP_003310598.1 TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); KEGG: vpa:VPA1743 N-acetylmuramic acid-6-phosphate etherase YP_003310599.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIsubunit beta; KEGG: ecv:APECO1_3597 PTS system, mannitol (cryptic)-specific IIBC component YP_003310600.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: tau:Tola_0284 mannitol dehydrogenase domain protein YP_003310601.1 PFAM: sugar isomerase (SIS); KEGG: sea:SeAg_B4594 3-hexulose-6-phosphate isomerase YP_003310602.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: dde:Dde_2632 ribulose-5-phosphate 3-epimerase YP_003310603.1 KEGG: pfs:PFLU3101 hypothetical protein YP_003310604.1 PFAM: cyclase family protein; KEGG: dds:Ddes_0598 cyclase family protein YP_003310605.1 PFAM: protein of unknown function DUF871 YP_003310606.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: reh:H16_B1066 transcriptional regulator YP_003310607.1 PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003310608.1 PFAM: extracellular solute-binding protein family 5; KEGG: avi:Avi_1405 ABC transporter substrate binding protein (oligopeptide) YP_003310609.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: har:HEAR0231 peptidase S8 YP_003310610.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: nam:NAMH_1566 outer membrane autotransporter barrel domain protein YP_003310611.1 PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: vsa:VSAL_II0910 HTH-type transcription regulator, AraC-family YP_003310612.1 PFAM: transcription activator effector binding; KEGG: oca:OCAR_4265 transcription activator, effector binding YP_003310613.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cak:Caul_4410 ABC transporter YP_003310614.1 PFAM: ABC transporter; KEGG: har:HEAR2357 ABC-type drug export system, membrane protein YP_003310615.1 PFAM: extracellular solute-binding protein family 5; KEGG: ppr:PBPRA2014 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003310616.1 PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003310617.1 PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003310618.1 PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: smd:Smed_3302 oligopeptide/dipeptide ABC transporter ATPase YP_003310619.1 KEGG: bja:bll0990 peptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003310620.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sde:Sde_2030 oligopeptide ABC transporter permease protein YP_003310621.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: csa:Csal_3000 binding-protein-dependent transport systems inner membrane component YP_003310622.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310623.1 KEGG: phosphatidylinositol-glycan biosynthesis class O protein YP_003310625.1 KEGG: pfo:Pfl01_2035 hypothetical protein YP_003310626.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: cko:CKO_05129 hypothetical protein YP_003310627.1 PFAM: phosphotransferase system PTS sorbose- specific IIC subunit; KEGG: cko:CKO_05130 hypothetical protein YP_003310628.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: sed:SeD_A4164 PTS system sorbose subfamily IIB component YP_003310629.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ecr:ECIAI1_3067 phosphotransferase system enzyme IIA YP_003310630.1 PFAM: protein of unknown function DUF1341; KEGG: cko:CKO_05127 hypothetical protein YP_003310631.1 TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: L-seryl-tRNA selenium transferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: esa:ESA_00254 hypothetical protein YP_003310632.1 KEGG: abm:p1ABSDF0001 replication protein YP_003310633.1 PFAM: protein of unknown function DUF1634; KEGG: mxa:MXAN_4781 hypothetical protein YP_003310634.1 PFAM: protein of unknown function DUF81; KEGG: glo:Glov_0075 protein of unknown function DUF81 YP_003310635.1 KEGG: kpn:KPN_04650 phosphotransferase protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC YP_003310636.1 PFAM: glycoside hydrolase family 4; KEGG: vpa:VP2634 6-phospho-beta-glucosidase YP_003310637.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ecr:ECIAI1_3291 galactosamine-6-phosphate isomerase YP_003310638.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cja:CJA_2253 GntR family transcriptional regulator YP_003310639.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: similar to GH09983p YP_003310640.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: vha:VIBHAR_01307 phosphoenolpyruvate-protein phosphotransferase YP_003310641.1 PFAM: beta-lactamase; flavodoxin/nitric oxide synthase; KEGG: cha:CHAB381_0232 flavodoxin YP_003310642.1 PFAM: ankyrin; SMART: ankyrin; KEGG: ankyrin 2,3/unc44 YP_003310644.1 KEGG: hypothetical protein YP_003310645.1 TIGRFAM: adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: pfs:PFLU0148 adhesin YP_003310647.1 KEGG: pfl:PFL_0642 hypothetical protein YP_003310648.1 TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis; KEGG: dvu:DVU2166 holin YP_003310650.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: ppr:PBPRA1330 hypothetical protein YP_003310652.1 KEGG: pag:PLES_08281 hypothetical protein YP_003310658.1 KEGG: conserved hypothetical protein YP_003310659.1 KEGG: viral A-type inclusion protein YP_003310661.1 KEGG: hypothetical protein YP_003310667.1 KEGG: Viral A-type inclusion protein repeat YP_003310668.1 KEGG: msu:MS0098 hypothetical protein YP_003310669.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; KEGG: nmn:NMCC_1029 hypothetical protein YP_003310670.1 KEGG: mch:Mchl_1604 terminase small subunit YP_003310675.1 PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; ATPase AAA; KEGG: hypothetical protein YP_003310676.1 PFAM: replication initiator A domain protein; KEGG: hypothetical protein YP_003310677.1 KEGG: hypothetical protein YP_003310680.1 KEGG: hypothetical protein YP_003310681.1 PFAM: BRO domain protein; KEGG: plu:plu2883 hypothetical protein YP_003310687.1 KEGG: vfm:VFMJ11_A0727 hypothetical protein YP_003310688.1 KEGG: hypothetical protein LOC100127582 YP_003310690.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rle:pRL90308 HTH transcriptional regulator YP_003310691.1 PFAM: protein of unknown function DUF955 YP_003310694.1 KEGG: hypothetical protein YP_003310695.1 PFAM: Excalibur domain protein; KEGG: sil:SPO0477 hypothetical protein YP_003310696.1 PFAM: peptidase S24 and S26 domain protein; KEGG: cjr:CJE0569 phage repressor protein YP_003310697.1 PFAM: integrase family protein; KEGG: lpn:lpg1229 site specific recombinase YP_003310698.1 PFAM: OmpA/MotB domain protein; KEGG: cla:Cla_0386 outer membrane fibronectin- binding protein YP_003310699.1 KEGG: geo:Geob_1577 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase subunit beta YP_003310700.1 KEGG: ppd:Ppro_3060 glycyl-tRNA synthetase subunit alpha; TIGRFAM: glycyl-tRNA synthetase, subunit alpha; PFAM: glycyl-tRNA synthetase subunit alpha YP_003310701.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: ppd:Ppro_3597 lipoprotein signal peptidase YP_003310702.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: geo:Geob_0392 isoleucyl-tRNA synthetase YP_003310703.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: dvl:Dvul_0970 L-lactate transport YP_003310704.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: pca:Pcar_0908 transcriptional accessory protein YP_003310705.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; haloacid dehalogenase; KEGG: fph:Fphi_1450 haloacid dehalogenase-like hydrolase YP_003310706.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase type 3; Haloacid dehalogenase domain protein hydrolase; KEGG: haloacid dehalogenase-like family hydrolase ; K07024 YP_003310711.1 PFAM: beta-lactamase; KEGG: Zn-dependent hydrolases, including glyoxylases YP_003310712.1 TIGRFAM: hybrid cluster protein; PFAM: Prismane; KEGG: dds:Ddes_1829 hybrid cluster protein YP_003310713.1 KEGG: gbm:Gbem_3017 hypothetical protein YP_003310714.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: nam:NAMH_0467 transcriptional regulator, Crp/Fnr family YP_003310715.1 KEGG: vvu:VV2_1649 bifunctional methionine sulfoxide reductase A/B protein; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B YP_003310716.1 KEGG: kpe:KPK_4442 hypothetical protein YP_003310717.1 TIGRFAM: outer membrane autotransporter barrel domain protein; KEGG: elf:LF82_p222 EntS EntS/YbdA MFS transporter YP_003310718.1 PFAM: glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38; KEGG: vsp:VS_II0606 sugar hydrolase YP_003310719.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; KEGG: efe:EFER_0782 enzyme IIC component of PTS YP_003310720.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; KEGG: ecl:EcolC_1282 PTS system, fructose-specific, IIB subunnit YP_003310721.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: asu:Asuc_0585 PTS IIA-like nitrogen- regulatory protein PtsN YP_003310722.1 PFAM: PRD domain protein; phosphoenolpyruvate- dependent sugar phosphotransferase system EIIA 2; M trans- acting positive regulator; hypothetical protein; Helix-turn-helix Mga DNA-binding trans-acting positive regulator; KEGG: eca:ECA0343 PTS system regulatory protein YP_003310723.1 PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: hap:HAPS_0188 tagatose 1,6-diphosphate aldolase YP_003310724.1 KEGG: pmr:PMI3501 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003310729.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: nis:NIS_0250 50S ribosomal protein L17 YP_003310730.1 KEGG: pla:Plav_2760 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, subunit alpha; PFAM: RNA polymerase insert; RNA polymerase subunit alpha domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003310731.1 KEGG: nis:NIS_0248 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003310732.1 PFAM: ribosomal protein S11; KEGG: sfu:Sfum_1580 30S ribosomal protein S11 YP_003310733.1 PFAM: ribosomal protein S13; KEGG: sfu:Sfum_1579 30S ribosomal protein S13 YP_003310734.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: pca:Pcar_0724 ribosomal protein L36 YP_003310735.1 KEGG: rpi:Rpic_3276 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein YP_003310736.1 KEGG: sat:SYN_01596 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003310737.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; KEGG: geo:Geob_3604 adenylate kinase YP_003310738.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: sat:SYN_01595 preprotein translocase subunit SecY YP_003310739.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: pca:Pcar_0720 ribosomal protein L15 YP_003310740.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: bau:BUAPTUC7_500 50S ribosomal protein L30 YP_003310741.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: ade:Adeh_1929 30S ribosomal protein S5P YP_003310742.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: mpo:Mpop_2148 ribosomal protein L18 YP_003310743.1 PFAM: ribosomal protein L6; KEGG: abo:ABO_0412 50S ribosomal protein L6 YP_003310744.1 PFAM: ribosomal protein S8; KEGG: bph:Bphy_2825 ribosomal protein S8 YP_003310745.1 PFAM: ribosomal protein S14; KEGG: rps14; 30S ribosomal protein S14 YP_003310746.1 PFAM: ribosomal protein L5; KEGG: gur:Gura_1078 50S ribosomal protein L5 YP_003310747.1 TIGRFAM: ribosomal protein L24; KEGG: pca:Pcar_0712 ribosomal protein L24 YP_003310748.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: ppd:Ppro_0690 50S ribosomal protein L14 YP_003310749.1 PFAM: ribosomal protein S17; KEGG: gme:Gmet_0635 30S ribosomal protein S17 YP_003310750.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: gsu:GSU2849 50S ribosomal protein L29 YP_003310751.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: sfu:Sfum_1562 50S ribosomal protein L16 YP_003310752.1 KEGG: nis:NIS_0229 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_003310753.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: apa:APP7_1850 50S ribosomal protein L22 YP_003310754.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: mes:Meso_1674 30S ribosomal protein S19P YP_003310755.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: glo:Glov_1349 50S ribosomal protein L2 YP_003310756.1 PFAM: ribosomal protein L25/L23; KEGG: ank:AnaeK_1935 ribosomal protein L25/L23 YP_003310757.1 PFAM: ribosomal protein L4/L1e; KEGG: gsu:GSU2856 50S ribosomal protein L4 YP_003310758.1 PFAM: ribosomal protein L3; KEGG: pca:Pcar_0701 50S ribosomal protein L3 YP_003310759.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: dps:DP1123 30S ribosomal protein S10 YP_003310760.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: gme:Gmet_0624 elongation factor Tu YP_003310761.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: nam:NAMH_0184 translation elongation factor G YP_003310762.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: mlo:mlr0284 30S ribosomal protein S7 YP_003310763.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: dol:Dole_0704 30S ribosomal protein S12 YP_003310764.1 KEGG: rfr:Rfer_2477 hypothetical protein YP_003310766.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: sse:Ssed_2728 hypothetical protein YP_003310768.1 SMART: helix-turn-helix domain protein YP_003310770.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: Os11g0603200; hypothetical protein YP_003310771.1 PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: bph:Bphy_1594 oxidoreductase domain- containing protein YP_003310772.1 PFAM: inner-membrane translocator; KEGG: ppr:PBPRB0472 sugar ABC transporter (permease) YP_003310773.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ppr:PBPRB0473 galactoside transport ATP- binding protein MglA YP_003310774.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pfl:PFL_2593 sugar ABC transporter periplasmic sugar-binding protein YP_003310775.1 PFAM: metallophosphoesterase; KEGG: ilo:IL0118 calcineurin-like phosphoesterase YP_003310776.1 PFAM: xylose isomerase; KEGG: hap:HAPS_1533 myoinositol catabolism protein with xylose isomerase domain (2-keto-myo-inositol dehydratase) YP_003310777.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: hso:HS_1576 dehydrogenase YP_003310778.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: avn:Avin_50100 myo-inositol catabolism protein IolD YP_003310779.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: dps:DP1915 methylmalonate-semialdehyde dehydrogenase YP_003310780.1 PFAM: myo-inositol catabolism IolB domain protein; KEGG: lpf:lpl1617 hypothetical protein YP_003310781.1 PFAM: PfkB domain protein; KEGG: ppr:PBPRB0464 PfkB family carbohydrate kinase YP_003310782.1 KEGG: hsm:HSM_0819 ketose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_003310783.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: ecd:ECDH10B_1908 DNA-binding transcriptional regulator YP_003310784.1 PFAM: PEBP family protein; KEGG: gur:Gura_1648 PEBP family protein YP_003310786.1 PFAM: protein of unknown function DUF1648; KEGG: ccs:CCNA_03122 hypothetical protein YP_003310787.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hch:HCH_03203 transcriptional regulator YP_003310788.1 PFAM: ADP-ribosylation/crystallin J1; KEGG: abm:ABSDF0852 ADP- ribosylglycohydrolase YP_003310789.1 PFAM: transposase IS3/IS911 family protein; KEGG: rfe:RF_pd64 transposase YP_003310791.1 TIGRFAM: adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: pfl:PFL_0166 adhesin/hemagglutinin YP_003310792.1 PFAM: polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: ara:Arad_4755 hemolysin activator protein hec YP_003310793.1 PFAM: 5'-nucleotidase domain protein; metallophosphoesterase; KEGG: set:SEN3895 hypothetical protein YP_003310796.1 KEGG: hypothetical protein YP_003310797.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: azc:AZC_3233 outer membrane autotransporter barrel YP_003310798.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_L_1773 sugar ABC transporter permease protein YP_003310799.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: smd:Smed_2314 binding-protein-dependent transport systems inner membrane component YP_003310800.1 KEGG: rec:RHECIAT_PC0000493 hypothetical protein YP_003310801.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1777 multiple sugar transporter substrate-binding protein YP_003310802.1 PFAM: glycosyl hydrolase family 88; KEGG: eca:ECA3559 plant-inducible protein YP_003310803.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein YP_003310804.1 PFAM: ROK family protein; KEGG: bid:Bind_3295 ROK family protein YP_003310805.1 KEGG: conserved hypothetical protein YP_003310806.1 KEGG: conserved hypothetical protein YP_003310807.1 KEGG: hypothetical protein YP_003310808.1 PFAM: xylose isomerase; KEGG: mlo:mll1734 hypothetical protein YP_003310809.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hin:HI0048 D-mannonate oxidoreductase YP_003310810.1 KEGG: bcj:BCAM1672 mannonate dehydratase; TIGRFAM: mannonate dehydratase; PFAM: Mannonate dehydratase YP_003310811.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: yps:YPTB2360 sugar ABC transporter (permease) YP_003310812.1 PFAM: binding-protein-dependent transporters inner membrane component; KEGG: eca:ECA2403 binding-protein-dependent transport system, inner membrane component YP_003310813.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein YP_003310814.1 PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein YP_003310815.1 PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: dal:Dalk_1674 oxidoreductase domain protein YP_003310816.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: rle:RL0824 oxidoreductase YP_003310817.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: eca:ECA2140 oxidoreductase YP_003310818.1 PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: ecr:ECIAI1_1938 sugar-binding transport (ABC transporter) ATP-binding protein (CymD protein) YP_003310819.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: asu:Asuc_0372 GntR family transcriptional regulator YP_003310820.1 PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: asu:Asuc_0372 GntR family transcriptional regulator YP_003310821.1 PFAM: PfkB domain protein; KEGG: hsm:HSM_0286 ribokinase-like domain- containing protein YP_003310822.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: hypothetical protein YP_003310823.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_00851 type I secretion outer membrane protein YP_003310824.1 PFAM: secretion protein HlyD; KEGG: pag:PLES_25901 membrane fusion protein YP_003310825.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pag:PLES_25911 ATP-binding protein YP_003310826.1 PFAM: ABC transporter; KEGG: pfl:PFL_2797 ABC transporter ATP-binding protein/permease YP_003310827.1 PFAM: ABC transporter; KEGG: pag:PLES_25922 inner membrane permease YP_003310828.1 PFAM: regulatory protein TetR; KEGG: avn:Avin_00620 transcriptional regulatory protein, TetR family YP_003310829.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: nmu:Nmul_A1940 glycoside hydrolase family protein YP_003310830.1 KEGG: gsu:GSU2286 enolase; TIGRFAM: enolase; PFAM: enolase YP_003310831.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: tbd:Tbd_1532 PpiC-type peptidyl-prolyl cis- trans isomerase YP_003310832.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tdn:Suden_1582 rubredoxin-type Fe(Cys)4 protein YP_003310833.1 PFAM: ferritin; KEGG: dvm:DvMF_0183 ferroxidase YP_003310834.1 PFAM: ferric-uptake regulator; KEGG: abu:Abu_0880 peroxide stress regulator YP_003310836.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sat:SYN_02529 single-stranded DNA-specific exonuclease YP_003310837.1 PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_0933 phosphotransferase system, EIIC YP_003310838.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1451 glycosyl hydrolase YP_003310839.1 PFAM: hypothetical protein; KEGG: eta:ETA_29240 phosphotransferase system mannitol/fructose-specific IIA domain YP_003310840.1 KEGG: hch:HCH_05422 dihydrofolate reductase YP_003310841.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: dar:Daro_3564 phosphate ABC transporter permease YP_003310842.1 TIGRFAM: phosphate ABC transporter inner membrane subunit PstC; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: atc:AGR_C_740 phosphate ABC transporter (permease) YP_003310843.1 TIGRFAM: phosphate binding protein; KEGG: gsu:GSU1099 phosphate ABC transporter periplasmic phosphate-binding protein YP_003310844.1 KEGG: pat:Patl_3198 helix-hairpin-helix repeat- containing competence protein ComEA YP_003310845.1 PFAM: protein of unknown function DUF421; KEGG: reu:Reut_A3332 hypothetical protein YP_003310846.1 PFAM: protein of unknown function DUF819; KEGG: nmc:NMC1730 integral membrane protein YP_003310847.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_26720 iron sulfur cluster binding protein (4Fe-4S ferredoxin family protein) YP_003310848.1 KEGG: bas:BUsg532 hypothetical protein; PFAM: radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003310850.1 KEGG: cla:Cla_0027 undecaprenol kinase, TIGRFAM: undecaprenol kinase; PFAM: bacitracin resistance protein BacA YP_003310852.1 PFAM: MORN variant repeat protein; KEGG: shw:Sputw3181_3567 MORN repeat-containing protein YP_003310855.1 PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; KEGG: dal:Dalk_0933 ribosomal protein S1 YP_003310856.1 KEGG: nam:NAMH_0910 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003310857.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: nmn:NMCC_0141 sugar transport PTS system phosphocarrier protein HPr YP_003310858.1 PFAM: glycoside hydrolase family 1; KEGG: kpe:KPK_A0131 glycosyl hydrolase, family 1 YP_003310859.1 TIGRFAM: phenylalanyl-tRNA synthetase subunit beta; KEGG: geo:Geob_3360 phenylalanyl-tRNA synthetase subunit beta YP_003310860.1 KEGG: geo:Geob_3361 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003310862.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: tau:Tola_0244 PTS system glucitol/sorbitol- specific IIA component YP_003310863.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310865.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: pin:Ping_2666 oxidoreductase domain- containing protein YP_003310866.1 PFAM: sugar-binding domain protein; KEGG: kpe:KPK_5266 sorbitol operon regulator YP_003310867.1 PFAM: MgtC/SapB transporter; KEGG: bgl:bglu_2g21640 MgtC family membrane protein YP_003310868.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: vsp:VS_0165 PTS system, maltose and glucose-specific IIABC components YP_003310869.1 PFAM: PHP domain protein; KEGG: pzu:PHZ_c3042 hypothetical protein YP_003310870.1 PFAM: glycoside hydrolase family 4; KEGG: spe:Spro_2007 glycoside hydrolase family protein YP_003310871.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: spe:Spro_2006 RpiR family transcriptional regulator YP_003310872.1 PFAM: stress responsive alpha-beta barrel domain protein; KEGG: nis:NIS_1700 hypothetical protein YP_003310873.1 PFAM: MORN variant repeat protein; KEGG: son:SO_1002 hypothetical protein YP_003310874.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: lip:LIA029 chromosome-partitioning ATPase YP_003310875.1 KEGG: hypothetical protein LOC100082032 YP_003310876.1 TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: ppd:Ppro_3520 formate dehydrogenase, subunit alpha YP_003310877.1 KEGG: pca:Pcar_1839 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003310878.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: pca:Pcar_1840 formate dehydrogenase accessory protein YP_003310879.1 KEGG: tau:Tola_1402 domain of unknown function DUF1848 YP_003310880.1 PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: dds:Ddes_1159 HhH-GPD family protein YP_003310881.1 KEGG: hypothetical protein YP_003310882.1 PFAM: protein of unknown function DUF541 YP_003310883.1 PFAM: protein of unknown function DUF711; KEGG: pca:Pcar_2119 hypothetical protein YP_003310884.1 PFAM: amino acid-binding ACT domain protein; KEGG: ppd:Ppro_0612 hypothetical protein YP_003310885.1 TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; KEGG: gbm:Gbem_4057 glucose inhibited division protein A YP_003310886.1 KEGG: gbm:Gbem_2782 hypothetical protein YP_003310887.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: thiamine pyrophosphokinase ; K00949 thiamine pyrophosphokinase YP_003310888.1 PFAM: nitroreductase; KEGG: ppd:Ppro_2354 nitroreductase YP_003310889.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: cla:Cla_1028 D-ribulose-5-phosphate 3- epimerase YP_003310890.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hhe:HH1444 guanosine monophosphate synthetase GuaA YP_003310891.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: vfm:VFMJ11_2152 neopullulanase YP_003310892.1 PFAM: peptidase M18 aminopeptidase I; KEGG: ppr:PBPRB1552 aminopeptidase 1 YP_003310893.1 PFAM: phosphoglucose isomerase (PGI); KEGG: afw:Anae109_2086 glucose-6-phosphate isomerase YP_003310894.1 PFAM: transcription activator effector binding; KEGG: sdn:Sden_1132 transcription activator, effector binding YP_003310895.1 PFAM: heat shock protein Hsp20; KEGG: nis:NIS_1628 heat shock protein HSP20 YP_003310896.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: geo:Geob_3837 tRNA modification GTPase TrmE YP_003310897.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: dal:Dalk_4132 single-stranded nucleic acid binding R3H domain protein YP_003310898.1 PFAM: hypothetical protein; KEGG: pca:Pcar_3143 inner-membrane protein YP_003310899.1 PFAM: protein of unknown function DUF37; KEGG: mmw:Mmwyl1_3004 hypothetical protein YP_003310900.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: sat:SYN_01012 ribonuclease P protein component YP_003310901.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: smt:Smal_4045 ribosomal protein L34 YP_003310903.1 PFAM: Resolvase domain; KEGG: vha:VIBHAR_p08245 resolvase YP_003310904.1 KEGG: sty:HCM1.203 hypothetical protein YP_003310909.1 KEGG: hypothetical protein YP_003310910.1 KEGG: hch:HCH_03582 hypothetical protein YP_003310911.1 KEGG: hypothetical protein YP_003310912.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nam:NAMH_0315 cobyrinic acid a,c-diamide synthase YP_003310914.1 PFAM: domain of unknown function DUF1738; KEGG: eba:p2B15 plasmid-specific DNA primase YP_003310915.1 PFAM: plasmid stabilization system; KEGG: tdn:Suden_1955 hypothetical protein YP_003310916.1 PFAM: CopG domain protein DNA-binding domain protein YP_003310921.1 KEGG: aby:p3ABAYE0112 putative partitioning protein YP_003310922.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pin:Ping_3739 cobyrinic acid a,c-diamide synthase YP_003310923.1 KEGG: conserved hypothetical protein YP_003310924.1 PFAM: plasmid stabilization system; KEGG: tdn:Suden_1955 hypothetical protein YP_003310927.1 KEGG: conserved hypothetical protein YP_003310928.1 KEGG: hpp:HPP12_p10 RepA YP_003310930.1 KEGG: hypothetical protein ; K06675 structural maintenance of chromosome 4 YP_003310932.1 PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I ATP-binding; KEGG: cjj:CJJ81176_pTet0045 DNA topoisomerase III YP_003310934.1 KEGG: arginyl-tRNA synthetase YP_003310935.1 KEGG: hypothetical protein YP_003310936.1 KEGG: mms:mma_2731 hypothetical protein YP_003310937.1 PFAM: Domain of unknown function DUF1863; KEGG: apl:APL_1185 hypothetical protein YP_003310939.1 KEGG: sun:SUN_0817 hypothetical protein YP_003310940.1 PFAM: PemK family protein; KEGG: gur:Gura_3378 transcriptional modulator of MazE/toxin, MazF YP_003310941.1 PFAM: SpoVT/AbrB domain protein; KEGG: cak:Caul_0353 transcriptional regulator/antitoxin, MazE YP_003310942.1 KEGG: wbr:WGLp018 hypothetical protein YP_003310943.1 TIGRFAM: adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: nme:NMB0493 hemagglutinin/hemolysin-related protein YP_003310944.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: ara:Arad_4755 hemolysin activator protein hec YP_003310945.1 KEGG: pmu:PM1543 hypothetical protein YP_003310946.1 KEGG: hypothetical protein YP_003310947.1 KEGG: conserved hypothetical protein YP_003310949.1 PFAM: regulatory protein TetR; KEGG: abu:Abu_0812 TetR family transcriptional regulator YP_003310950.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: cha:CHAB381_0311 hypothetical protein YP_003310956.1 KEGG: TPR; translocated promoter region (to activated MET oncogene) ; K09291 nucleoprotein TPR YP_003310958.1 PFAM: integrase family protein; KEGG: ccv:CCV52592_0372 oxygen-independent coproporphyrinogen III oxidase YP_003310961.1 KEGG: SMC1 structural maintenance of chromosomes 1 ; K06636 structural maintenance of chromosome 1 YP_003310962.1 PFAM: DnaB domain protein helicase; TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: cju:C8J_0523 replicative DNA helicase YP_003310963.1 KEGG: hypothetical protein