-- dump date   	20140620_062215
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004498475.1	SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; TIGRFAM: Chromosomal replication control, initiator DnaA; KEGG: spe:Spro_0032 chromosomal replication initiation protein; HAMAP: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal
YP_004498476.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: spe:Spro_0033 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain
YP_004498477.1	TIGRFAM: DNA-binding, RecF; HAMAP: DNA replication and repair protein recF; KEGG: spe:Spro_0034 recombination protein F; PFAM: RecF/RecN/SMC protein, N-terminal
YP_004498478.1	SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA gyrase, subunit B; KEGG: spe:Spro_0035 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal
YP_004498479.1	KEGG: spe:Spro_0036 sugar phosphatase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3
YP_004498480.1	KEGG: ypz:YPZ3_3509 ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin
YP_004498481.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: spe:Spro_0037 hypothetical protein
YP_004498482.1	KEGG: spe:Spro_0046 hypothetical protein
YP_004498483.1	PFAM: Protein of unknown function DUF1375; KEGG: spe:Spro_0047 hypothetical protein
YP_004498484.1	PFAM: Heat shock protein Hsp20; KEGG: spe:Spro_0048 heat shock protein IbpA
YP_004498485.1	PFAM: Heat shock protein Hsp20; KEGG: spe:Spro_0049 heat shock chaperone IbpB
YP_004498486.1	TIGRFAM: YidE/YbjL duplication; HAMAP: transport protein yidE; KEGG: spe:Spro_0050 hypothetical protein; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal
YP_004498487.1	KEGG: spe:Spro_0053 valine--pyruvate transaminase; PFAM: Aminotransferase, class I/II
YP_004498488.1	KEGG: spe:Spro_0054 periplasmic alpha-amylase precursor; PFAM: Glycosyl hydrolase, family 13, catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004498489.1	PFAM: CopG-like DNA-binding; KEGG: spe:Spro_0055 CopG family transcriptional regulator
YP_004498490.1	PFAM: Plasmid stabilisation system; KEGG: spe:Spro_0056 plasmid stabilization system protein
YP_004498491.1	HAMAP: Glyoxylate/hydroxypyruvate reductase B; KEGG: spe:Spro_0057 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004498492.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0058 major facilitator transporter
YP_004498493.1	KEGG: spe:Spro_0059 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004498494.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: spe:Spro_0060 xylose isomerase domain-containing protein
YP_004498495.1	KEGG: spe:Spro_0061 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004498496.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; KEGG: spe:Spro_0062 putative outer membrane lipoprotein
YP_004498497.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0063 hypothetical protein
YP_004498498.1	TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: spe:Spro_0064 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase
YP_004498499.1	TIGRFAM: Outer membrane autotransporter barrel; KEGG: spe:Spro_0065 outer membrane autotransporter; PFAM: Autotransporter beta-domain; Lipase, GDSL
YP_004498500.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0068 major facilitator transporter
YP_004498501.1	PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: spe:Spro_0069 glycyl-tRNA synthetase subunit alpha
YP_004498502.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; KEGG: spe:Spro_0070 glycyl-tRNA synthetase subunit beta
YP_004498503.1	PFAM: Filamentation induced by cAMP/death on curing, related; KEGG: din:Selin_2492 filamentation induced by cAMP protein Fic
YP_004498504.1	KEGG: spe:Spro_0071 hypothetical protein
YP_004498505.1	KEGG: spe:Spro_0072 PTS system mannitol-specific transporter subunit IIC; TIGRFAM: Phosphotransferase system, mannitol-specific enzyme IIC; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; Phosphotransferase system, EIIC; Phosphotransferase system, lactose/cellobiose-specific IIB subunit
YP_004498506.1	HAMAP: Mannitol-1-phosphate 5-dehydrogenase; KEGG: spe:Spro_0073 mannitol-1-phosphate 5-dehydrogenase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal
YP_004498507.1	PFAM: Mannitol repressor; KEGG: spe:Spro_0074 mannitol repressor protein
YP_004498508.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0075 lysine exporter protein LysE/YggA
YP_004498509.1	KEGG: spe:Spro_0076 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004498510.1	KEGG: spe:Spro_0077 hypothetical protein
YP_004498511.1	PFAM: Methyltransferase type 11; KEGG: spe:Spro_0078 type 11 methyltransferase
YP_004498512.1	PFAM: Molybdenum cofactor sulfurase, C-terminal; Protein of unknown function 3-alpha region; KEGG: spe:Spro_0079 hypothetical protein
YP_004498513.1	KEGG: spe:Spro_0080 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004498514.1	PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: spe:Spro_0081 superoxide dismutase
YP_004498515.1	TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Protein fdhD; KEGG: spe:Spro_0082 formate dehydrogenase accessory protein; PFAM: Formate dehydrogenase, subunit FdhD
YP_004498516.1	PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; manually curated; TIGRFAM: Formate dehydrogenase, alpha subunit, anaerobic; Twin-arginine translocation pathway, signal sequence; KEGG: yen:YE4135 formate dehydrogenase-o, major subunit
YP_004498517.1	KEGG: spe:Spro_0085 formate dehydrogenase subunit beta; TIGRFAM: Formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase, transmembrane; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004498518.1	TIGRFAM: Formate dehydrogenase, gamma subunit; KEGG: spe:Spro_0086 formate dehydrogenase-O subunit gamma
YP_004498519.1	TIGRFAM: Formate dehydrogenase accessory protein; HAMAP: Formate dehydrogenase accessory protein; KEGG: spe:Spro_0087 formate dehydrogenase accessory protein FdhE; PFAM: Formate dehydrogenase accessory protein
YP_004498520.1	KEGG: spe:Spro_0088 hypothetical protein
YP_004498521.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spe:Spro_0089 putative glutathione S-transferase
YP_004498522.1	PFAM: Pyridoxal phosphate-dependent transferase; TIGRFAM: L-seryl-tRNA selenium transferase; HAMAP: L-seryl-tRNA(Sec) selenium transferase; KEGG: spe:Spro_0090 selenocysteine synthase
YP_004498523.1	KEGG: spe:Spro_0091 selenocysteinyl-tRNA-specific translation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 2; Translation elongation factor SelB, winged helix, type 3
YP_004498524.1	PFAM: CopG-like DNA-binding; KEGG: rlt:Rleg2_5345 CopG family transcriptional regulator
YP_004498525.1	PFAM: Plasmid stabilisation system; KEGG: rec:RHECIAT_PC0000504 putative plasmid stabilization protein
YP_004498526.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0092 major facilitator transporter
YP_004498527.1	manually curated; KEGG: spe:Spro_0093 hypothetical protein
YP_004498528.1	KEGG: spe:Spro_0094 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain
YP_004498529.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_0095 isochorismatase hydrolase
YP_004498530.1	PFAM: Amidohydrolase 3; KEGG: spe:Spro_0096 putative deaminase
YP_004498531.1	KEGG: spe:Spro_0097 xylulokinase; TIGRFAM: Xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004498532.1	PFAM: Xylose isomerase, TIM barrel domain; TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: spe:Spro_0098 xylose isomerase
YP_004498533.1	KEGG: spe:Spro_0099 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter, substrate-binding protein; PFAM: Periplasmic binding protein/LacI transcriptional regulator
YP_004498534.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, D-xylose, ATP-binding protein; KEGG: spe:Spro_0100 xylose transporter ATP-binding subunit; PFAM: ABC transporter-like
YP_004498535.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_0101 monosaccharide-transporting ATPase
YP_004498536.1	KEGG: spe:Spro_0102 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004498537.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spe:Spro_0105 LysR family transcriptional regulator
YP_004498538.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0106 putative cyanate transporter
YP_004498539.1	KEGG: spe:Spro_0107 hypothetical protein
YP_004498542.1	PFAM: Glycosyltransferase sugar-binding region containing DXD motif; KEGG: ppr:PBPRA0243 hypothetical protein
YP_004498543.1	PFAM: Glycosyl transferase, family 2; KEGG: efa:EF_B0049 glycosyl transferase, group 2 family protein
YP_004498544.1	PFAM: Peptidase C39, bacteriocin processing; ABC transporter, transmembrane region; ABC transporter-like; KEGG: rah:Rahaq_5120 peptidase C39 bacteriocin processing; SMART: ATPase, AAA+ type, core
YP_004498545.1	PFAM: Secretion protein HlyD; KEGG: rah:Rahaq_5121 secretion protein HlyD family protein
YP_004498547.1	KEGG: pct:PC1_0400 hypothetical protein
YP_004498548.1	PFAM: Nucleotidyltransferase; KEGG: pfl:PFL_2430 hypothetical protein
YP_004498549.1	KEGG: pam:PANA_1956 EanR; PFAM: Autoinducer-binding; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004498550.1	PFAM: Phosphoglycerate mutase; KEGG: spe:Spro_0117 hypothetical protein
YP_004498552.1	KEGG: spe:Spro_0118 hypothetical protein
YP_004498553.1	PFAM: Major facilitator superfamily MFS-1; KEGG: amd:AMED_6779 MFS transporter arabinose efflux permease
YP_004498554.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bam:Bamb_1994 LysR family transcriptional regulator
YP_004498555.1	KEGG: spe:Spro_0124 hypothetical protein
YP_004498556.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_0125 NAD-dependent epimerase/dehydratase
YP_004498557.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0126 LysR family transcriptional regulator
YP_004498558.1	KEGG: spe:Spro_0127 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004498559.1	TIGRFAM: Phosphotransferase system, beta-glucoside-specific IIABC component; Phosphotransferase system, glucose-like IIB component; Phosphotransferase system, sugar-specific permease EIIA 1 domain; KEGG: pct:PC1_2439 PTS system, beta-glucoside-specific IIABC subunit; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004498560.1	KEGG: rah:Rahaq_1725 glycoside hydrolase family 1; PFAM: Glycoside hydrolase, family 1
YP_004498561.1	PFAM: Carbohydrate-selective porin OprB; KEGG: kpn:KPN_02580 putative carbohydrate-selective porin
YP_004498562.1	SMART: Metal-dependent phosphohydrolase, HD region; KEGG: spe:Spro_0128 metal dependent phosphohydrolase
YP_004498563.1	KEGG: spe:Spro_0129 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004498564.1	KEGG: spe:Spro_0130 OsmC family protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein
YP_004498565.1	PFAM: Sulfatase; Protein of unknown function DUF1705; KEGG: spe:Spro_0131 phosphoethanolamine transferase
YP_004498566.1	KEGG: spe:Spro_0132 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004498567.1	KEGG: spe:Spro_0133 sensory histidine kinase UhpB; PFAM: MASE1; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004498568.1	KEGG: spe:Spro_0134 regulatory protein UhpC; TIGRFAM: GlpT transporter; PFAM: Major facilitator superfamily MFS-1
YP_004498569.1	KEGG: spe:Spro_0135 hypothetical protein
YP_004498570.1	PFAM: Glycoside hydrolase, family 18, catalytic domain; Chitinase A N-terminal; KEGG: spe:Spro_0137 chitinase; SMART: Chitinase II; PKD
YP_004498571.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_0138 extracellular solute-binding protein
YP_004498572.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0139 dipeptide transporter permease DppB
YP_004498573.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0140 dipeptide transporter
YP_004498574.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_0141 dipeptide transporter ATP-binding subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004498575.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_0142 dipeptide transporter ATP-binding subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004498576.1	TIGRFAM: Cellulose synthase operon protein YhjU; KEGG: spe:Spro_0143 hypothetical protein
YP_004498577.1	TIGRFAM: Cellulose biosynthesis, BcsF/YhjT; KEGG: spe:Spro_0144 hypothetical protein
YP_004498578.1	TIGRFAM: Cellulose biosynthesis protein BcsE; KEGG: spe:Spro_0145 hypothetical protein
YP_004498579.1	KEGG: spe:Spro_0146 hypothetical protein
YP_004498580.1	TIGRFAM: Cellulose synthase operon protein YhjQ; KEGG: spe:Spro_0147 YhjQ family protein
YP_004498581.1	KEGG: spe:Spro_0148 cellulose synthase catalytic subunit; TIGRFAM: Cellulose synthase catalytic subunit (UDP-forming); PFAM: Glycosyl transferase, family 2; Type IV pilus assembly PilZ
YP_004498582.1	PFAM: Cellulose synthase BcsB, bacterial; KEGG: spe:Spro_0149 cellulose synthase regulator protein
YP_004498583.1	KEGG: spe:Spro_0150 endo-1,4-D-glucanase; PFAM: Glycoside hydrolase, family 8
YP_004498584.1	PFAM: Cellulose synthase operon C, C-terminal; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: spe:Spro_0151 cellulose synthase subunit BcsC
YP_004498585.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; KEGG: spe:Spro_0152 putative phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004498586.1	KEGG: spe:Spro_0153 C4-dicarboxylate transporter DctA; HAMAP: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter
YP_004498587.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: spe:Spro_0154 peptidase M16 domain-containing protein
YP_004498588.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: spe:Spro_0155 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004498589.1	KEGG: spe:Spro_0156 ATP-dependent DNA helicase Rep; TIGRFAM: DNA helicase, ATP-dependent, RepA type; PFAM: DNA helicase, UvrD/REP type
YP_004498590.1	HAMAP: Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; KEGG: spe:Spro_0157 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase
YP_004498591.1	HAMAP: ATP-dependent RNA helicase rhlB; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_0158 ATP-dependent RNA helicase RhlB; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004498592.1	KEGG: spe:Spro_0159 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004498593.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: spe:Spro_0160 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core
YP_004498594.1	KEGG: spe:Spro_0161 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region
YP_004498595.1	PFAM: Lipopolysaccharide biosynthesis; KEGG: spe:Spro_0162 lipopolysaccharide biosynthesis protein WzzE
YP_004498596.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: spe:Spro_0163 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004498597.1	TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: spe:Spro_0164 UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal
YP_004498598.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: spe:Spro_0165 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004498599.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: spe:Spro_0166 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004498600.1	KEGG: spe:Spro_0167 TDP-fucosamine acetyltransferase; TIGRFAM: TDP-D-fucosamine acetyltransferase WecD; PFAM: GCN5-related N-acetyltransferase
YP_004498601.1	KEGG: spe:Spro_0168 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004498602.1	PFAM: Polysaccharide biosynthesis protein; KEGG: spe:Spro_0169 polysaccharide biosynthesis protein
YP_004498603.1	KEGG: spe:Spro_0170 4-alpha-L-fucosyltransferase; HAMAP: 4-alpha-L-fucosyltransferase; PFAM: 4-alpha-L-fucosyltransferase
YP_004498604.1	KEGG: spe:Spro_0171 putative common antigen polymerase; HAMAP: WzyE; PFAM: WzyE
YP_004498605.1	PFAM: Glycosyl transferase WecB/TagA/CpsF; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; HAMAP: UDP-N-acetyl-D-mannosaminuronic acid transferase; KEGG: spe:Spro_0172 putative UDP-N-acetyl-D-mannosaminuronic acid transferase
YP_004498606.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_0173 putative transport protein YifK
YP_004498607.1	KEGG: spe:Spro_0175 putative protoheme IX biogenesis protein; TIGRFAM: Protohaem IX biosynthesis protein; PFAM: HemY, N-terminal; Tetratricopeptide TPR2
YP_004498608.1	KEGG: spe:Spro_0176 putative uroporphyrinogen III C-methyltransferase; PFAM: HemX
YP_004498609.1	PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: spe:Spro_0177 uroporphyrinogen-III synthase
YP_004498610.1	TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: spe:Spro_0178 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase
YP_004498611.1	KEGG: spe:Spro_0179 adenylate cyclase; PFAM: Adenylate cyclase, class-I
YP_004498612.1	TIGRFAM: Frataxin-like; HAMAP: Protein cyaY; KEGG: spe:Spro_0180 frataxin-like protein; PFAM: Frataxin-like
YP_004498613.1	KEGG: spe:Spro_0181 lipoprotein
YP_004498614.1	TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: spe:Spro_0182 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004498615.1	PFAM: Protein of unknown function DUF484; KEGG: spe:Spro_0183 hypothetical protein
YP_004498616.1	TIGRFAM: Tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; KEGG: spe:Spro_0184 site-specific tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004498617.1	KEGG: spe:Spro_0185 flavin mononucleotide phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004498618.1	KEGG: spe:Spro_0186 DNA-dependent helicase II; TIGRFAM: DNA helicase, ATP-dependent, UvrD type; PFAM: DNA helicase, UvrD/REP type
YP_004498619.1	KEGG: spe:Spro_0187 hypothetical protein
YP_004498620.1	KEGG: spe:Spro_0188 magnesium/nickel/cobalt transporter CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004498621.1	KEGG: spe:Spro_0189 putative ammonia monooxygenase; TIGRFAM: AbrB duplication, membrane protein; PFAM: Putative ammonia monooxygenase
YP_004498622.1	KEGG: spe:Spro_0190 transporter DMT superfamily protein; TIGRFAM: RarD protein; PFAM: Protein of unknown function DUF6, transmembrane
YP_004498623.1	KEGG: spe:Spro_0191 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004498624.1	KEGG: spe:Spro_0192 phospholipase A; PFAM: Phospholipase A1
YP_004498625.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type, N-terminal; PFAM: RQC domain; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: spe:Spro_0193 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain
YP_004498626.1	KEGG: spe:Spro_0194 threonine efflux system; TIGRFAM: Homoserine/Threonine efflux protein; PFAM: Lysine exporter protein (LYSE/YGGA)
YP_004498627.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0195 homoserine/homoserine lactone efflux protein
YP_004498628.1	KEGG: spe:Spro_0196 lysophospholipase L2; PFAM: Alpha/beta hydrolase fold-1
YP_004498629.1	KEGG: spe:Spro_0197 putative sugar phosphatase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3
YP_004498630.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: spe:Spro_0198 glycerophosphodiester phosphodiesterase
YP_004498631.1	KEGG: spe:Spro_0199 sn-glycerol-3-phosphate transporter; TIGRFAM: Glycerol-3-phosphate transporter; GlpT transporter; PFAM: Major facilitator superfamily MFS-1
YP_004498633.1	TIGRFAM: Anaerobic glycerol-3-phosphate dehydrogenase, A subunit; KEGG: spe:Spro_0200 sn-glycerol-3-phosphate dehydrogenase subunit A; PFAM: FAD dependent oxidoreductase; BFD-like [2Fe-2S]-binding region
YP_004498634.1	PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; TIGRFAM: Anaerobic glycerol-3-phosphate dehydrogenase, subunit B; HAMAP: Anaerobic glycerol-3-phosphate dehydrogenase subunit B; KEGG: spe:Spro_0201 anaerobic glycerol-3-phosphate dehydrogenase subunit B
YP_004498635.1	KEGG: spe:Spro_0202 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: Anaerobic glycerol-3-phosphate dehydrogenase, C subunit; PFAM: Cysteine-rich region, CCG
YP_004498636.1	KEGG: spe:Spro_0203 hypothetical protein
YP_004498637.1	PFAM: GCN5-related N-acetyltransferase; KEGG: fbl:Fbal_3737 GCN5-related N-acetyltransferase
YP_004498638.1	KEGG: spe:Spro_0204 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165
YP_004498639.1	KEGG: spe:Spro_0205 SirA family protein; HAMAP: Sulfurtransferase tusA; PFAM: SirA-like
YP_004498640.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: spe:Spro_0209 zinc/cadmium/mercury/lead-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004498641.1	PFAM: Peptidase M10, serralysin, C-terminal; Peptidase M10A/M12B, matrixin/adamalysin; Haemolysin-type calcium-binding region; KEGG: spe:Spro_0210 serralysin; SMART: Peptidase, metallopeptidases
YP_004498642.1	PFAM: Metalloprotease inhibitor I38; KEGG: spe:Spro_0211 metalloprotease inhibitor I38
YP_004498643.1	PFAM: YhhN-like; KEGG: spe:Spro_0212 YhhN family protein
YP_004498644.1	PFAM: Protein of unknown function DUF2500; KEGG: pva:Pvag_3015 hypothetical protein
YP_004498645.1	PFAM: Protein of unknown function DUF1145; KEGG: spe:Spro_0219 hypothetical protein
YP_004498646.1	TIGRFAM: Conserved hypothetical protein CHP00095; KEGG: spe:Spro_0220 16S rRNA m(2)G966-methyltransferase; PFAM: Protein of unknown function methylase putative
YP_004498647.1	TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: spe:Spro_0221 signal recognition particle-docking protein FtsY; SMART: ATPase, AAA+ type, core
YP_004498648.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Cell division protein FtsE; Cell division ATP-binding protein FtsE; KEGG: spe:Spro_0222 cell division protein FtsE; PFAM: ABC transporter-like
YP_004498649.1	KEGG: spe:Spro_0223 cell division protein FtsX; TIGRFAM: ABC transporter, FtsX cell division permease; PFAM: Protein of unknown function DUF214, permase predicted
YP_004498650.1	KEGG: spe:Spro_0224 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4
YP_004498651.1	KEGG: spe:Spro_0225 hypothetical protein
YP_004498652.1	KEGG: spe:Spro_0226 hypothetical protein
YP_004498653.1	KEGG: spe:Spro_0227 GCN5-related N-acetyltransferase
YP_004498654.1	PFAM: Extracellular ligand-binding receptor; KEGG: spe:Spro_0228 extracellular ligand-binding receptor
YP_004498655.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_0229 branched-chain amino acid transporter permease subunit LivH
YP_004498656.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_0230 leucine/isoleucine/valine transporter permease subunit
YP_004498657.1	PFAM: ABC transporter-like; KEGG: spe:Spro_0231 leucine/isoleucine/valine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004498658.1	PFAM: ABC transporter-like; KEGG: spe:Spro_0232 leucine/isoleucine/valine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004498659.1	KEGG: spe:Spro_0233 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II
YP_004498660.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_0234 glycerol-3-phosphate transporter periplasmic binding protein
YP_004498661.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0235 glycerol-3-phosphate transporter permease
YP_004498662.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0236 glycerol-3-phosphate transporter membrane protein
YP_004498663.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_0237 glycerol-3-phosphate transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004498664.1	KEGG: spe:Spro_0238 cytoplasmic glycerophosphodiester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase
YP_004498665.1	PFAM: Auxin efflux carrier; KEGG: ypi:YpsIP31758_0261 transporter, auxin efflux carrier (AEC) family protein
YP_004498666.1	KEGG: spe:Spro_0239 hypothetical protein
YP_004498667.1	KEGG: spe:Spro_0240 carboxylate/amino acid/amine transporter; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter; PFAM: Protein of unknown function DUF6, transmembrane
YP_004498668.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0241 LysR family transcriptional regulator
YP_004498669.1	PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; HAMAP: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; KEGG: spe:Spro_0242 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_004498670.1	KEGG: spe:Spro_0243 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004498671.1	KEGG: spe:Spro_0244 uridine phosphorylase; TIGRFAM: Uridine phosphorylase; PFAM: Nucleoside phosphorylase
YP_004498672.1	KEGG: spe:Spro_0245 protein tyrosine/serine phosphatase
YP_004498673.1	KEGG: spe:Spro_0246 DedA family protein
YP_004498674.1	PFAM: RmuC; KEGG: spe:Spro_0247 hypothetical protein
YP_004498675.1	TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: spe:Spro_0248 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004498676.1	PFAM: Sterol-binding; KEGG: spe:Spro_0249 sterol-binding domain-containing protein
YP_004498677.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; HAMAP: ubiquinone biosynthesis protein ubiB; KEGG: spe:Spro_0250 putative ubiquinone biosynthesis protein UbiB; PFAM: ABC-1
YP_004498678.1	KEGG: spe:Spro_0251 twin arginine-targeting protein translocase; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004498679.1	TIGRFAM: Twin-arginine translocation protein TatB; HAMAP: Twin-arginine translocation protein TatB; KEGG: spe:Spro_0252 twin-arginine translocation protein, TatB subunit; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004498680.1	KEGG: spe:Spro_0253 twin-arginine protein translocation system subunit TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_004498681.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: spe:Spro_0254 DNase TatD
YP_004498682.1	KEGG: spe:Spro_0255 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_004498683.1	TIGRFAM: Transcription activator RfaH; PFAM: Transcription antitermination protein, NusG, N-terminal; KEGG: spe:Spro_0256 transcriptional activator RfaH; SMART: Transcription antitermination protein, NusG, N-terminal
YP_004498684.1	KEGG: spe:Spro_0257 peptidase E; PFAM: Peptidase S51, dipeptidase E
YP_004498685.1	TIGRFAM: Carboxylyase-related; HAMAP: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: spe:Spro_0258 3-octaprenyl-4-hydroxybenzoate decarboxylase; PFAM: Carboxylyase-related
YP_004498686.1	KEGG: spe:Spro_0259 FMN reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region
YP_004498687.1	TIGRFAM: Acetyl-CoA C-acyltransferase FadA; Thiolase; HAMAP: Acetyl-CoA C-acyltransferase FadA; KEGG: spe:Spro_0260 3-ketoacyl-CoA thiolase
YP_004498688.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; TIGRFAM: Fatty oxidation complex, alpha subunit FadB; HAMAP: Fatty oxidation complex, alpha subunit FadB; KEGG: spe:Spro_0261 multifunctional fatty acid oxidation complex subunit alpha
YP_004498689.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0262 major facilitator transporter
YP_004498690.1	HAMAP: Xaa-Pro dipeptidase; KEGG: spe:Spro_0263 proline dipeptidase; PFAM: Peptidase M24, structural domain
YP_004498691.1	KEGG: spe:Spro_0264 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0029, Impact; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal
YP_004498692.1	KEGG: spe:Spro_0265 potassium transporter; TIGRFAM: Potassium uptake protein TrkH; PFAM: Cation transporter
YP_004498693.1	KEGG: spe:Spro_0266 protoporphyrinogen oxidase
YP_004498694.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: spe:Spro_0267 UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004498695.1	TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; Helix-turn-helix biotin operon repressor region; KEGG: spe:Spro_0268 biotin--protein ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; Biotin protein ligase, C-terminal
YP_004498696.1	PFAM: Phosphoribulokinase/uridine kinase; TIGRFAM: Bacterial pantothenate kinase; HAMAP: Pantothenate kinase; KEGG: spe:Spro_0269 pantothenate kinase
YP_004498697.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pct:PC1_0197 GCN5-related N-acetyltransferase
YP_004498698.1	KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004498699.1	KEGG: spe:Spro_0271 preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein secE/sec61-gamma protein
YP_004498700.1	TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: sgl:SG0129 transcription antitermination protein NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW
YP_004498701.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; KEGG: spe:Spro_0273 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_004498702.1	KEGG: spe:Spro_0274 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_004498703.1	KEGG: spe:Spro_0275 50S ribosomal protein L10; HAMAP: 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_004498704.1	TIGRFAM: Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; KEGG: spe:Spro_0276 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal
YP_004498705.1	TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: spe:Spro_0277 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 7
YP_004498706.1	SMART: RNA polymerase, N-terminal; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; KEGG: spe:Spro_0278 DNA-directed RNA polymerase subunit beta'; HAMAP: DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5
YP_004498707.1	PFAM: GCN5-related N-acetyltransferase; KEGG: epy:EpC_11810 GCN5-related N-acetyltransferase
YP_004498708.1	KEGG: epy:EpC_11820 hypothetical protein
YP_004498709.1	KEGG: epy:EpC_11830 two-component system sensory histidine kinase; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004498710.1	PFAM: BetR; KEGG: eta:ETA_11350 response regulator receiver
YP_004498711.1	KEGG: mxa:MXAN_5464 hypothetical protein
YP_004498712.1	KEGG: spe:Spro_0279 thiamine biosynthesis protein ThiH; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM
YP_004498713.1	KEGG: spe:Spro_0280 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis
YP_004498714.1	KEGG: spe:Spro_0281 sulfur carrier protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS
YP_004498715.1	PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: spe:Spro_0282 UBA/ThiF-type NAD/FAD binding protein
YP_004498716.1	TIGRFAM: Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; KEGG: spe:Spro_0283 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase
YP_004498717.1	TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: spe:Spro_0284 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_004498718.1	PFAM: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ; KEGG: spe:Spro_0285 anti-RNA polymerase sigma 70 factor
YP_004498719.1	HAMAP: NADH pyrophosphatase; KEGG: spe:Spro_0286 NADH pyrophosphatase; PFAM: NUDIX hydrolase domain; NADH pyrophosphatase-like, N-terminal; Zinc ribbon, NADH pyrophosphatase
YP_004498720.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: Uroporphyrinogen decarboxylase HemE; HAMAP: Uroporphyrinogen decarboxylase HemE; KEGG: spe:Spro_0287 uroporphyrinogen decarboxylase
YP_004498721.1	HAMAP: Endonuclease V; KEGG: spe:Spro_0288 endonuclease V; PFAM: Endonuclease V
YP_004498722.1	PFAM: Protein of unknown function DUF416; KEGG: spe:Spro_0289 hypothetical protein
YP_004498723.1	KEGG: spe:Spro_0290 transcriptional regulator HU subunit alpha; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004498724.1	PFAM: Protein of unknown function DUF1481; KEGG: spe:Spro_0291 hypothetical protein
YP_004498725.1	PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: spe:Spro_0292 phosphoribosylamine--glycine ligase
YP_004498726.1	KEGG: spe:Spro_0293 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; TIGRFAM: AICARFT/IMPCHase bienzyme; HAMAP: Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, formylation region
YP_004498727.1	PFAM: Protein of unknown function DUF1486; KEGG: pen:PSEEN3064 hypothetical protein
YP_004498728.1	TIGRFAM: Cation/acetate symporter ActP; Sodium/solute symporter, subgroup; HAMAP: Cation/acetate symporter ActP; KEGG: spe:Spro_0295 acetate permease; PFAM: Sodium/solute symporter
YP_004498729.1	PFAM: Protein of unknown function DUF485; KEGG: eic:NT01EI_0192 hypothetical protein
YP_004498730.1	PFAM: AMP-dependent synthetase/ligase; TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: spe:Spro_0297 acetyl-CoA synthetase
YP_004498731.1	PFAM: Sodium:dicarboxylate symporter; KEGG: spe:Spro_0298 sodium:dicarboxylate symporter
YP_004498732.1	KEGG: pao:Pat9b_3472 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_004498733.1	PFAM: Sulphate transporter; KEGG: eta:ETA_28920 sulphate transporter
YP_004498734.1	KEGG: spe:Spro_0301 hypothetical protein
YP_004498735.1	KEGG: spe:Spro_0302 replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal
YP_004498736.1	KEGG: spe:Spro_0303 hypothetical protein
YP_004498737.1	KEGG: ypz:YPZ3_0294 hypothetical protein
YP_004498738.1	KEGG: spe:Spro_0305 hypothetical protein
YP_004498739.1	KEGG: spe:Spro_0306 hypothetical protein
YP_004498740.1	KEGG: spe:Spro_0307 hypothetical protein
YP_004498741.1	KEGG: spe:Spro_0308 hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4669 family; PFAM: Protein of unknown function DUF1845
YP_004498742.1	KEGG: spe:Spro_0309 hypothetical protein
YP_004498743.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: spe:Spro_0310 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger
YP_004498744.1	KEGG: spe:Spro_0311 hypothetical protein
YP_004498745.1	KEGG: pst:PSPTO_4753 hypothetical protein
YP_004498746.1	KEGG: pst:PSPTO_4752 hypothetical protein
YP_004498747.1	PFAM: DNA helicase, UvrD/REP type; Protein of unknown function DUF955; KEGG: pst:PSPTO_4751 UvrD/REP helicase family protein
YP_004498748.1	KEGG: spe:Spro_0320 type IV B pilus protein
YP_004498749.1	KEGG: spe:Spro_4184 hypothetical protein
YP_004498750.1	TIGRFAM: integrating conjugative element protein, PFL_4693 family; KEGG: spe:Spro_0322 hypothetical protein
YP_004498751.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ypz:YPZ3_0306 hypothetical protein
YP_004498752.1	TIGRFAM: integrating conjugative element protein, PFL_4695 family; KEGG: spe:Spro_0324 hypothetical protein
YP_004498753.1	PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: spe:Spro_0325 restriction endonuclease
YP_004498754.1	TIGRFAM: conjugative coupling factor TraD, SXT/TOL subfamily; KEGG: spe:Spro_4179 putative plasmid transfer protein
YP_004498755.1	TIGRFAM: integrating conjugative element membrane protein, PFL_4697 family; KEGG: spe:Spro_0327 hypothetical protein
YP_004498757.1	KEGG: spe:Spro_0329 hypothetical protein; TIGRFAM: Protein of unknown function, RAQPRD; PFAM: Protein of unknown function, RAQPRD
YP_004498758.1	TIGRFAM: integrating conjugative element protein, PFL_4701 family; KEGG: spe:Spro_0330 hypothetical protein
YP_004498759.1	TIGRFAM: integrating conjugative element membrane protein, PFL_4702 family; KEGG: spe:Spro_0331 hypothetical protein
YP_004498760.1	KEGG: spe:Spro_4174 hypothetical protein
YP_004498761.1	KEGG: spe:Spro_4173 hypothetical protein
YP_004498762.1	TIGRFAM: integrating conjugative element protein, PFL_4704 family; KEGG: ypz:YPZ3_0316 hypothetical protein
YP_004498763.1	TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: spe:Spro_4171 hypothetical protein
YP_004498765.1	TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; KEGG: spe:Spro_4170 putative lipoprotein
YP_004498766.1	TIGRFAM: conjugative transfer ATPase, PFL_4706 family; KEGG: spe:Spro_4169 putative plasmid-like protein
YP_004498767.1	KEGG: spe:Spro_0338 hypothetical protein
YP_004498768.1	KEGG: pwa:Pecwa_0669 hypothetical protein
YP_004498769.1	KEGG: ecz:ECS88_1342 hypothetical protein
YP_004498770.1	KEGG: spe:Spro_0348 hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4709 family; PFAM: Protein of unknown function DUF1525
YP_004498771.1	KEGG: spe:Spro_0349 hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; PFAM: Protein of unknown function DUF1527
YP_004498772.1	TIGRFAM: integrating conjugative element protein, PFL_4711 family; KEGG: spe:Spro_0350 hypothetical protein
YP_004498773.1	manually curated; KEGG: spe:Spro_0351 hypothetical protein
YP_004498774.1	KEGG: spe:Spro_0352 hypothetical protein
YP_004498775.1	manually curated; KEGG: spe:Spro_0353 hypothetical protein
YP_004498776.1	KEGG: ent:Ent638_4323 phage integrase family protein; manually curated; PFAM: Integrase, catalytic core, phage
YP_004498777.1	KEGG: ent:Ent638_4324 hypothetical protein
YP_004498779.1	manually curated; KEGG: geo:Geob_1729 hypothetical protein
YP_004498780.1	KEGG: xau:Xaut_0674 hypothetical protein
YP_004498782.1	KEGG: esc:Entcl_1091 hypothetical protein
YP_004498783.1	PFAM: RES; KEGG: enc:ECL_B089 hypothetical protein
YP_004498786.1	KEGG: ddd:Dda3937_01866 hypothetical protein
YP_004498787.1	KEGG: spe:Spro_0389 hypothetical protein
YP_004498788.1	KEGG: spe:Spro_0390 hypothetical protein
YP_004498789.1	KEGG: gur:Gura_2882 hypothetical protein
YP_004498791.1	KEGG: spq:SPAB_05434 hypothetical protein
YP_004498792.1	KEGG: spe:Spro_0393 hypothetical protein
YP_004498793.1	KEGG: spe:Spro_0394 hypothetical protein
YP_004498794.1	PFAM: Domain of unknown function DUF1738; KEGG: spe:Spro_0395 hypothetical protein
YP_004498795.1	PFAM: Protein of unknown function DUF1219; KEGG: spe:Spro_0396 hypothetical protein
YP_004498796.1	KEGG: rah:Rahaq_5121 secretion protein HlyD family protein; manually curated; PFAM: Secretion protein HlyD
YP_004498797.1	PFAM: Peptidase C39, bacteriocin processing; ABC transporter, transmembrane region; ABC transporter-like; KEGG: rah:Rahaq_5120 peptidase C39 bacteriocin processing; SMART: ATPase, AAA+ type, core
YP_004498798.1	KEGG: kpe:KPK_A0149 hypothetical protein
YP_004498799.1	KEGG: spe:Spro_4054 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004498800.1	KEGG: spe:Spro_4053 hypothetical protein
YP_004498801.1	KEGG: spe:Spro_4052 hypothetical protein
YP_004498802.1	KEGG: spe:Spro_4051 response regulator receiver protein; PFAM: BetR; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004498803.1	KEGG: spe:Spro_4050 hypothetical protein
YP_004498804.1	KEGG: spe:Spro_0400 relaxase; TIGRFAM: integrating conjugative element relaxase, PFGI-1 class; PFAM: Protein of unknown function DUF1528, C-terminal; Protein of unknown function, putative helicase/relaxase
YP_004498805.1	PFAM: Integrase, catalytic core, phage; KEGG: spe:Spro_4117 integrase family protein
YP_004498806.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_0402 putative transcriptional regulator
YP_004498807.1	HAMAP: Thiol:disulfide interchange protein dsbD; KEGG: spe:Spro_0403 thiol:disulfide interchange protein precursor; PFAM: Cytochrome c assembly protein, transmembrane region; Thioredoxin domain
YP_004498808.1	PFAM: Divalent ion tolerance protein, CutA1; KEGG: spe:Spro_0404 divalent-cation tolerance protein CutA
YP_004498809.1	KEGG: spe:Spro_0405 anaerobic C4-dicarboxylate transporter; TIGRFAM: Anaerobic c4-dicarboxylate membrane transporter; PFAM: Anaerobic c4-dicarboxylate membrane transporter
YP_004498810.1	TIGRFAM: Aspartate ammonia-lyase; KEGG: spe:Spro_0406 aspartate ammonia-lyase; PFAM: Fumarate lyase; Fumarase C, C-terminal
YP_004498811.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: spe:Spro_0407 FxsA cytoplasmic membrane protein
YP_004498812.1	KEGG: spe:Spro_0408 co-chaperonin GroES; HAMAP: Chaperonin Cpn10, subgroup; PFAM: Chaperonin Cpn10
YP_004498813.1	TIGRFAM: Chaperonin Cpn60; HAMAP: 60 kDa chaperonin; KEGG: spe:Spro_0409 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1
YP_004498814.1	KEGG: spe:Spro_0410 hypothetical protein
YP_004498815.1	TIGRFAM: lysine-2,3-aminomutase-related protein; Protein of unknown function DUF160; KEGG: spe:Spro_0411 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM
YP_004498816.1	TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: spe:Spro_0412 elongation factor P; SMART: Elongation factor P, C-terminal
YP_004498817.1	PFAM: Entericidin EcnAB; KEGG: spe:Spro_0413 entericidin EcnAB
YP_004498818.1	PFAM: Entericidin EcnAB; KEGG: spe:Spro_0414 entericidin EcnAB
YP_004498819.1	PFAM: Small multidrug resistance protein; KEGG: spe:Spro_0415 small multidrug resistance protein
YP_004498820.1	KEGG: spe:Spro_0416 fumarate reductase subunit D; HAMAP: Fumarate reductase subunit D; PFAM: Fumarate reductase, D subunit
YP_004498821.1	KEGG: spe:Spro_0417 fumarate reductase subunit C; HAMAP: Fumarate reductase, subunit C; PFAM: Fumarate reductase, subunit C
YP_004498822.1	TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; KEGG: spe:Spro_0418 fumarate reductase iron-sulfur subunit; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004498823.1	TIGRFAM: Fumarate reductase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: spe:Spro_0419 fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004498824.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); TIGRFAM: Lysyl-tRNA synthetase-related; HAMAP: Lysyl-tRNA synthetase-related; KEGG: spe:Spro_0420 lysyl-tRNA synthetase
YP_004498825.1	PFAM: Mechanosensitive ion channel MscS; KEGG: spe:Spro_0421 hypothetical protein
YP_004498826.1	TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; KEGG: spe:Spro_0422 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_004498827.1	TIGRFAM: GTPase EngC; HAMAP: ribosome biogenesis GTPase RsgA; KEGG: spe:Spro_0423 ribosome-associated GTPase; PFAM: GTPase EngC
YP_004498828.1	HAMAP: Oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: spe:Spro_0424 oligoribonuclease; SMART: Exonuclease
YP_004498829.1	KEGG: spe:Spro_0425 putative iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730
YP_004498830.1	KEGG: spe:Spro_0426 hypothetical protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal
YP_004498831.1	KEGG: spe:Spro_0427 putative ATPase; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004498832.1	KEGG: spe:Spro_0428 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup
YP_004498833.1	TIGRFAM: DNA mismatch repair protein, N-terminal; HAMAP: DNA mismatch repair protein mutL; KEGG: spe:Spro_0429 DNA mismatch repair protein; PFAM: DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; MutL, C-terminal, dimerisation
YP_004498834.1	PFAM: tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: spe:Spro_0430 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase
YP_004498835.1	KEGG: spe:Spro_0431 RNA-binding protein Hfq; TIGRFAM: Host factor Hfq; PFAM: Like-Sm ribonucleoprotein, core
YP_004498836.1	KEGG: spe:Spro_0432 putative GTPase HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related
YP_004498837.1	TIGRFAM: HflK; PFAM: Band 7 protein; KEGG: spe:Spro_0433 FtsH protease regulator HflK; SMART: Band 7 protein
YP_004498838.1	TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: spe:Spro_0434 FtsH protease regulator HflC; SMART: Band 7 protein
YP_004498839.1	KEGG: spe:Spro_0435 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2065
YP_004498840.1	KEGG: spe:Spro_0436 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; HAMAP: Adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase
YP_004498841.1	TIGRFAM: Transcriptional regulator, Rrf2; HAMAP: HTH-type transcriptional repressor nsrR; KEGG: spe:Spro_0437 transcriptional repressor NsrR; PFAM: Transcriptional regulator, Rrf2
YP_004498842.1	TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribonuclease R winged-helix domain; Ribosomal protein S1, RNA binding domain; KEGG: spe:Spro_0438 exoribonuclease R; SMART: Cold shock protein
YP_004498843.1	KEGG: spe:Spro_0439 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding
YP_004498844.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; KEGG: spe:Spro_0440 isovaleryl CoA dehydrogenase
YP_004498845.1	PFAM: Protein of unknown function DUF350; KEGG: spe:Spro_0441 hypothetical protein
YP_004498846.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_0442 hypothetical protein
YP_004498847.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_0443 putative biofilm stress and motility protein A
YP_004498848.1	KEGG: spe:Spro_0444 esterase
YP_004498849.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_0445 hypothetical protein
YP_004498850.1	TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; KEGG: spe:Spro_0446 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_004498851.1	manually curated; HAMAP: Primosomal replication protein n; KEGG: yps:YPTB0439 primosomal replication protein N; PFAM: Primosome PriB/single-strand DNA-binding
YP_004498852.1	TIGRFAM: Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; KEGG: rah:Rahaq_0442 ribosomal protein S18; PFAM: Ribosomal protein S18
YP_004498853.1	TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; HAMAP: Ribosomal protein L9, bacteria/chloroplast; KEGG: rah:Rahaq_0443 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal
YP_004498854.1	PFAM: Protein of unknown function DUF488; KEGG: spe:Spro_0450 hypothetical protein
YP_004498855.1	PFAM: Opacity-associated protein A; Opacity-associated protein A, N-terminal; KEGG: spe:Spro_0451 opacity-associated protein A
YP_004498856.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; KEGG: spe:Spro_0452 peptidyl-prolyl cis-trans isomerase
YP_004498857.1	KEGG: pct:PC1_3427 hypothetical protein; TIGRFAM: Iron-sulfur cluster repair di-iron protein; PFAM: Protein of unknown function DUF542, ScdA N-terminal; Haemerythrin/HHE cation-binding motif
YP_004498858.1	TIGRFAM: 2 ,3 -cyclic-nucleotide 2 -phosphodiesterase; KEGG: spe:Spro_0453 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_004498859.1	KEGG: spe:Spro_0454 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; PFAM: Inositol monophosphatase
YP_004498860.1	KEGG: spe:Spro_0455 hypothetical protein; TIGRFAM: Conserved hypothetical protein, YtfJ; PFAM: Conserved hypothetical protein, YtfJ
YP_004498861.1	PFAM: Protein of unknown function DUF1107; KEGG: spe:Spro_0456 hypothetical protein
YP_004498862.1	KEGG: spe:Spro_0457 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core
YP_004498863.1	PFAM: Peptide methionine sulphoxide reductase MsrA; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; HAMAP: Peptide methionine sulphoxide reductase MsrA; KEGG: spe:Spro_0458 methionine sulfoxide reductase A
YP_004498864.1	PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: spe:Spro_0459 surface antigen (D15)
YP_004498865.1	PFAM: Protein of unknown function DUF490; KEGG: spe:Spro_0460 hypothetical protein
YP_004498866.1	PFAM: AIG2-like; KEGG: rah:Rahaq_0455 AIG2 family protein
YP_004498867.1	HAMAP: Inorganic pyrophosphatase; KEGG: spe:Spro_0462 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_004498868.1	KEGG: spe:Spro_0463 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004498869.1	HAMAP: Fructose-1,6-bisphosphatase; KEGG: spe:Spro_0464 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase
YP_004498870.1	TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; KEGG: spe:Spro_0465 UDP-N-acetylmuramate; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal
YP_004498871.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_0466 hypothetical protein
YP_004498872.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_0467 hypothetical protein
YP_004498873.1	KEGG: spe:Spro_0468 arginine repressor; TIGRFAM: Arginine repressor; PFAM: Arginine repressor
YP_004498874.1	PFAM: Lactate/malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria; HAMAP: Malate dehydrogenase; KEGG: spe:Spro_0469 malate dehydrogenase
YP_004498875.1	KEGG: spe:Spro_0470 putative transcriptional regulator Nlp
YP_004498876.1	PFAM: Transposase MuA/Repressor CI, DNA-binding; KEGG: spe:Spro_3546 MuA-transposase/repressor protein CI DNA-binding
YP_004498877.1	KEGG: spe:Spro_0472 octaprenyl diphosphate synthase; PFAM: Polyprenyl synthetase
YP_004498878.1	TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: spe:Spro_0473 50S ribosomal protein L21; PFAM: Ribosomal protein L21
YP_004498879.1	KEGG: spe:Spro_0474 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27
YP_004498880.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_0475 hypothetical protein
YP_004498881.1	TIGRFAM: GTP-binding protein Obg/CgtA; HAMAP: GTPase obg; KEGG: spe:Spro_0476 GTPase ObgE; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_004498882.1	KEGG: spe:Spro_0477 sensor protein BasS/PmrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004498883.1	KEGG: spe:Spro_0478 DNA-binding transcriptional regulator BasR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004498884.1	TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: spe:Spro_0479 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_004498885.1	TIGRFAM: Prokaryotic transcription elongation factor GreA; HAMAP: Transcription elongation factor greA; KEGG: spe:Spro_0480 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_004498886.1	KEGG: spe:Spro_0481 hypothetical protein; TIGRFAM: RNA-binding, CRM domain, prokaryote; PFAM: RNA-binding, CRM domain
YP_004498887.1	TIGRFAM: Ribosomal RNA large subunit methyltransferase J; HAMAP: Ribosomal RNA large subunit methyltransferase E; KEGG: spe:Spro_0482 23S rRNA methyltransferase J; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004498888.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: spe:Spro_0483 ATP-dependent metalloprotease; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004498889.1	TIGRFAM: Dihydropteroate synthase; KEGG: spe:Spro_0484 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS
YP_004498890.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: spe:Spro_0485 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004498891.1	KEGG: spe:Spro_0486 preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004498892.1	manually curated; HAMAP: Uncharacterised protein family UPF0090, bacteria; KEGG: spe:Spro_0487 hypothetical protein; PFAM: Uncharacterised protein family UPF0090
YP_004498893.1	KEGG: spe:Spro_0488 transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain
YP_004498894.1	KEGG: spe:Spro_0489 translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2
YP_004498895.1	TIGRFAM: Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; KEGG: spe:Spro_0490 ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_004498896.1	TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; HAMAP: tRNA pseudouridine synthase B; KEGG: spe:Spro_0491 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; Pseudouridine synthase II, TruB, subfamily 1, C-terminal, bacterial-type
YP_004498897.1	KEGG: pct:PC1_0588 ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15
YP_004498898.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; TIGRFAM: Polyribonucleotide nucleotidyltransferase; HAMAP: Polyribonucleotide nucleotidyltransferase; KEGG: spe:Spro_0493 polynucleotide phosphorylase/polyadenylase
YP_004498899.1	KEGG: spe:Spro_0494 lipoprotein NlpI; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat
YP_004498900.1	KEGG: spe:Spro_0495 ATP-dependent RNA helicase DeaD; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004498901.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: spe:Spro_0496 hypothetical protein
YP_004498902.1	PFAM: SirA-like; KEGG: spe:Spro_0497 hypothetical protein
YP_004498903.1	SMART: Helix-turn-helix type 3; KEGG: pao:Pat9b_5281 helix-turn-helix domain-containing protein
YP_004498904.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pau:PA14_47900 putative MFS transporter
YP_004498905.1	KEGG: spe:Spro_0498 hypothetical protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup
YP_004498906.1	PFAM: Secretion protein HlyD; KEGG: spe:Spro_0499 secretion protein HlyD family protein
YP_004498907.1	PFAM: ABC-2 type transporter; KEGG: spe:Spro_0500 ABC-2 type transporter
YP_004498908.1	PFAM: ABC-2 type transporter; KEGG: spe:Spro_0501 ABC-2 type transporter
YP_004498909.1	PFAM: Transcriptional regulator, YbiH, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: smt:Smal_3543 transcriptional regulator TetR
YP_004498910.1	PFAM: Peptidase M24, structural domain; KEGG: smt:Smal_3542 peptidase M24
YP_004498912.1	PFAM: Peptidase U32; KEGG: spe:Spro_0503 peptidase U32
YP_004498913.1	PFAM: Peptidase U32; KEGG: spe:Spro_0504 peptidase U32
YP_004498914.1	PFAM: Sterol-binding; KEGG: spe:Spro_0505 sterol-binding domain-containing protein
YP_004498915.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0506 GCN5-related N-acetyltransferase
YP_004498916.1	KEGG: spe:Spro_0507 excinuclease ABC subunit C; HAMAP: UPF0213 protein yhbQ; PFAM: Excinuclease ABC, C subunit, N-terminal
YP_004498918.1	HAMAP: UPF0306 protein yhbP; KEGG: spe:Spro_0510 hypothetical protein
YP_004498919.1	PFAM: Semialdehyde dehydrogenase, NAD-binding; KEGG: spe:Spro_0511 hypothetical protein
YP_004498920.1	TIGRFAM: Phosphonate metabolism protein PhnP; KEGG: spe:Spro_0512 carbon-phosphorus lyase complex accessory protein
YP_004498921.1	TIGRFAM: Phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: spe:Spro_0513 putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol)
YP_004498922.1	KEGG: spe:Spro_0514 ribose 1,5-bisphosphokinase; TIGRFAM: Phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: Guanylate kinase/L-type calcium channel region
YP_004498923.1	KEGG: spe:Spro_0515 phosphonate metabolism protein PhnM; TIGRFAM: Phosphonate metabolism PhnM; PFAM: Amidohydrolase 1
YP_004498924.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphonate C-P lyase system, PhnL; KEGG: spe:Spro_0516 phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter-like
YP_004498925.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphonate C-P lyase system, PhnK; KEGG: spe:Spro_0517 phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004498926.1	PFAM: Phosphonate metabolism PhnJ; KEGG: spe:Spro_0518 phosphonate metabolism protein PhnJ
YP_004498927.1	PFAM: Phosphonate metabolism; KEGG: spe:Spro_0519 phosphonate metabolism protein PhnI
YP_004498928.1	KEGG: spe:Spro_0520 carbon-phosphorus lyase complex subunit; TIGRFAM: Bacterial phosphonate metabolism; PFAM: Bacterial phosphonate metabolism
YP_004498929.1	KEGG: spe:Spro_0521 phosphonate metabolism protein PhnG; TIGRFAM: Phosphonate metabolism PhnG; PFAM: Phosphonate metabolism PhnG
YP_004498930.1	TIGRFAM: Phosphonate C-P lyase system, transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: spe:Spro_0522 phosphonate metabolism transcriptional regulator PhnF; SMART: HTH transcriptional regulator, GntR
YP_004498931.1	PFAM: Protein of unknown function DUF318, transmembrane; KEGG: spe:Spro_0523 permease
YP_004498932.1	PFAM: Protein of unknown function DUF1778; KEGG: tau:Tola_1814 transcriptional regulator, CopG family
YP_004498933.1	KEGG: vvy:VVA0314 plasmid stabilization system protein protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system
YP_004498934.1	TIGRFAM: Ribonucleoside-triphosphate reductase activating, anaerobic; KEGG: spe:Spro_0524 anaerobic ribonucleotide reductase-activating protein
YP_004498935.1	TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; KEGG: spe:Spro_0525 anaerobic ribonucleoside triphosphate reductase; PFAM: Formate C-acetyltransferase glycine radical; ATP-cone
YP_004498936.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0526 LysR family transcriptional regulator
YP_004498937.1	PFAM: Flavodoxin-like fold; KEGG: spe:Spro_0527 NAD(P)H dehydrogenase (quinone)
YP_004498938.1	SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; TIGRFAM: Alpha,alpha-phosphotrehalase; KEGG: spe:Spro_0528 trehalose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic region
YP_004498939.1	TIGRFAM: Phosphotransferase system, trehalose-specific IIBC component; Phosphotransferase system, glucose-like IIB component; KEGG: spe:Spro_0529 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004498940.1	KEGG: spe:Spro_0530 entry exclusion protein 2
YP_004498941.1	TIGRFAM: Trehalose operon repressor; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_0534 trehalose repressor; SMART: HTH transcriptional regulator, LacI
YP_004498942.1	TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: spe:Spro_0535 magnesium-transporting ATPase MgtA; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal
YP_004498943.1	KEGG: spe:Spro_0536 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Beta-N-acetylhexosaminidase-like
YP_004498944.1	PFAM: Proteasome, subunit alpha/beta; KEGG: spe:Spro_0537 20S proteasome subunits A and B
YP_004498945.1	KEGG: spe:Spro_0538 transglutaminase domain-containing protein; PFAM: Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like
YP_004498946.1	PFAM: Protein of unknown function DUF403, bacteria; KEGG: spe:Spro_0539 hypothetical protein
YP_004498947.1	PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; KEGG: spe:Spro_0540 hypothetical protein
YP_004498948.1	KEGG: spe:Spro_0543 putative endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_004498949.1	TIGRFAM: Aspartate transcarbamylase regulatory subunit; HAMAP: Aspartate transcarbamylase regulatory subunit; KEGG: spe:Spro_0544 aspartate carbamoyltransferase regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit, N-terminal; Aspartate carbamoyltransferase regulatory subunit, C-terminal
YP_004498950.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase; KEGG: spe:Spro_0545 aspartate carbamoyltransferase catalytic subunit
YP_004498951.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_0553 extracellular solute-binding protein
YP_004498952.1	PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; TIGRFAM: Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; KEGG: spe:Spro_0554 ornithine carbamoyltransferase
YP_004498953.1	PFAM: Protein of unknown function DUF1260; KEGG: spe:Spro_0555 hypothetical protein
YP_004498954.1	PFAM: tRNA--hydroxylase; KEGG: spe:Spro_0556 tRNA--hydroxylase
YP_004498955.1	KEGG: spe:Spro_0557 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004498956.1	PFAM: Acyltransferase 3; KEGG: spe:Spro_0558 acyltransferase 3
YP_004498957.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_0559 GCN5-related N-acetyltransferase
YP_004498958.1	TIGRFAM: Valyl-tRNA synthetase, class Ia; HAMAP: Valyl-tRNA synthetase; KEGG: spe:Spro_0560 valyl-tRNA synthetase
YP_004498959.1	KEGG: spe:Spro_0561 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit, HolC
YP_004498960.1	HAMAP: cytosol aminopeptidase; KEGG: spe:Spro_0562 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_004498961.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: spe:Spro_0563 permease YjgP/YjgQ family protein
YP_004498962.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: spe:Spro_0564 permease YjgP/YjgQ family protein
YP_004498963.1	KEGG: eca:ECA0408 putative plasmid-related protein
YP_004498965.1	KEGG: spe:Spro_0566 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_004498967.1	KEGG: spe:Spro_0567 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004498968.1	KEGG: rah:Rahaq_4719 HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal
YP_004498969.1	PFAM: Putative endonuclease, Z1 domain; KEGG: hel:HELO_4400 hypothetical protein
YP_004498970.1	KEGG: jan:Jann_2862 hypothetical protein
YP_004498971.1	KEGG: hel:HELO_4399 hypothetical protein
YP_004498972.1	KEGG: jan:Jann_2860 hypothetical protein
YP_004498973.1	KEGG: pmi:PMT9312_0377 hypothetical protein
YP_004498974.1	manually curated; TIGRFAM: DNA methylase, C-5 cytosine-specific; KEGG: saz:Sama_0281 modification methylase (cytosine-specific methyltransferase; PFAM: DNA methylase, C-5 cytosine-specific
YP_004498975.1	manually curated; TIGRFAM: DNA mismatch endonuclease vsr; KEGG: pde:Pden_2062 DNA mismatch endonuclease vsr; PFAM: DNA mismatch endonuclease vsr
YP_004498976.1	KEGG: spe:Spro_0575 cryptic 6-phospho-beta-glucosidase; PFAM: Glycoside hydrolase, family 1
YP_004498977.1	KEGG: spe:Spro_0576 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004498978.1	KEGG: spe:Spro_0577 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004498979.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: spe:Spro_0580 putative GTP-binding protein YjiA
YP_004498980.1	PFAM: Protein of unknown function DUF466; KEGG: spe:Spro_0581 hypothetical protein
YP_004498981.1	PFAM: Carbon starvation protein CstA; KEGG: spe:Spro_0582 carbon starvation protein CstA
YP_004498982.1	PFAM: Beta-lactamase-related; KEGG: azc:AZC_0991 beta-lactamase
YP_004498983.1	KEGG: kva:Kvar_2211 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup
YP_004498984.1	KEGG: spe:Spro_0583 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 20
YP_004498985.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pam:PANA_4172 hypothetical protein
YP_004498986.1	KEGG: spe:Spro_0584 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic region
YP_004498987.1	KEGG: spe:Spro_0585 hypothetical protein
YP_004498988.1	PFAM: Protein of unknown function DUF2137; KEGG: pcr:Pcryo_2476 hypothetical protein
YP_004498989.1	KEGG: ctu:Ctu_28120 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004498990.1	KEGG: spe:Spro_0586 putative receptor
YP_004498991.1	KEGG: ppr:PBPRA2121 inner membrane transport protein YdhC; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004498992.1	PFAM: Cytochrome P450; KEGG: sna:Snas_1843 cytochrome P450
YP_004498993.1	PFAM: Phosphopantetheine-binding; KEGG: mab:MAB_3576c phosphopantetheine attachment site domain-containing protein
YP_004498994.1	PFAM: NADPH-dependent FMN reductase; KEGG: pao:Pat9b_4663 NADPH-dependent FMN reductase
YP_004498995.1	PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: scb:SCAB_3301 oxidoreductase
YP_004498996.1	PFAM: Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: sma:SAV_3651 non-ribosomal peptide synthetase/acyl-CoA dehydrogenase fusion protein
YP_004498997.1	PFAM: AMP-dependent synthetase/ligase; KEGG: scb:SCAB_3281 NRPS-associated AMP-binding protein
YP_004498998.1	TIGRFAM: Thioester reductase; KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA; PFAM: Male sterility, NAD-binding; Phosphopantetheine-binding
YP_004498999.1	TIGRFAM: Amino acid adenylation; KEGG: ava:Ava_C0009 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Luciferase-like, subgroup; Methyltransferase type 11
YP_004499000.1	KEGG: spe:Spro_0596 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499001.1	KEGG: spe:Spro_0597 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499002.1	PFAM: YkuD domain; KEGG: spe:Spro_0598 ErfK/YbiS/YcfS/YnhG family protein
YP_004499003.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: spe:Spro_0600 biopolymer transport protein ExbD/TolR
YP_004499004.1	TIGRFAM: TonB, C-terminal; KEGG: spe:Spro_0601 TonB family protein
YP_004499005.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spe:Spro_0602 TonB-dependent receptor
YP_004499006.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: spe:Spro_0603 MotA/TolQ/ExbB proton channel
YP_004499007.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: spe:Spro_0604 phospholipase D/transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004499008.1	KEGG: spe:Spro_0607 beta alanine--pyruvate transaminase; PFAM: Aminotransferase class-III
YP_004499009.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0608 LysR family transcriptional regulator
YP_004499011.1	KEGG: spe:Spro_0611 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004499012.1	KEGG: spe:Spro_0612 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004499013.1	PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_0613 FAD dependent oxidoreductase
YP_004499014.1	PFAM: Protein of unknown function DUF861, cupin-3; KEGG: spe:Spro_0614 hypothetical protein
YP_004499015.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_0615 alpha/beta hydrolase fold domain-containing protein
YP_004499016.1	PFAM: Histone deacetylase superfamily; KEGG: spe:Spro_0616 histone deacetylase superfamily protein
YP_004499017.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0617 major facilitator transporter
YP_004499018.1	KEGG: spe:Spro_0618 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004499019.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_0619 amino acid permease-associated protein
YP_004499020.1	KEGG: spe:Spro_0620 hypothetical protein
YP_004499021.1	KEGG: spe:Spro_0621 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499022.1	PFAM: Molybdenum cofactor biosynthesis protein F; KEGG: spe:Spro_0622 MoaF
YP_004499023.1	KEGG: spe:Spro_0623 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499024.1	TIGRFAM: Homoprotocatechuate degradation transcriptional regulator HpaR; PFAM: HTH transcriptional regulator, MarR; KEGG: spe:Spro_0624 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR
YP_004499025.1	TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; KEGG: spe:Spro_0625 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004499026.1	TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit; KEGG: spe:Spro_0626 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004499027.1	TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; KEGG: spe:Spro_0627 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004499028.1	TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD; KEGG: krh:KRH_22020 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004499029.1	KEGG: spe:Spro_0629 5-carboxymethyl-2-hydroxymuconate isomerase; PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase
YP_004499030.1	TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: spe:Spro_0630 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004499031.1	TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: spe:Spro_0631 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase
YP_004499032.1	KEGG: spe:Spro_0632 4-hydroxyphenylacetate transporter; TIGRFAM: 4-hydroxyphenylacetate permease; PFAM: Major facilitator superfamily MFS-1
YP_004499033.1	TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein hpaA; PFAM: Helix-turn-helix, AraC type; KEGG: spe:Spro_0633 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain
YP_004499034.1	KEGG: spe:Spro_0634 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component gammaproteobacteria; PFAM: 4-hydroxyphenylacetate 3-hydroxylase
YP_004499035.1	KEGG: spe:Spro_0635 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase component; PFAM: Flavin reductase-like, FMN-binding
YP_004499036.1	PFAM: Beta-lactamase-related; KEGG: spe:Spro_0636 beta-lactam binding protein AmpH
YP_004499037.1	KEGG: spe:Spro_0637 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004499038.1	KEGG: spe:Spro_0638 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499039.1	KEGG: spe:Spro_0639 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004499040.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: spe:Spro_0640 mandelate racemase/muconate lactonizing protein
YP_004499041.1	PFAM: Amidohydrolase 2; KEGG: spe:Spro_0641 amidohydrolase 2
YP_004499042.1	KEGG: spe:Spro_0642 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499043.1	PFAM: Rhamnose mutarotase; KEGG: spe:Spro_0643 hypothetical protein
YP_004499044.1	KEGG: spe:Spro_0644 L-fucose transporter; TIGRFAM: L-fucose permease; PFAM: Major facilitator superfamily MFS-1
YP_004499045.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pwa:Pecwa_2790 major facilitator superfamily MFS_1
YP_004499046.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: axy:AXYL_02575 LysR family regulatory helix-turn-helix protein 75
YP_004499047.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pfl:PFL_4098 transporter
YP_004499048.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: axy:AXYL_03987 TetR family regulatory protein 17
YP_004499049.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spe:Spro_0645 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004499050.1	PFAM: Protein of unknown function DUF1435; KEGG: spe:Spro_0646 hypothetical protein
YP_004499051.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0647 LysR family transcriptional regulator
YP_004499052.1	KEGG: spe:Spro_0648 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004499053.1	HAMAP: Ribosomal RNA small subunit methyltransferase C; KEGG: spe:Spro_0649 16S ribosomal RNA m2G1207 methyltransferase; PFAM: Methyltransferase small; Methyltransferase small, N-terminal
YP_004499054.1	KEGG: spe:Spro_0650 DNA polymerase III subunit psi; PFAM: DNA polymerase III, psi subunit
YP_004499055.1	TIGRFAM: Ribosomal-protein-alanine acetyltransferase; KEGG: spe:Spro_0651 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004499056.1	KEGG: sbn:Sbal195_3478 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004499057.1	KEGG: rah:Rahaq_3831 HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, C-terminal; HipA-like, N-terminal
YP_004499058.1	TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; HAMAP: Peptide chain release factor 3; KEGG: spe:Spro_0652 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_004499059.1	KEGG: spe:Spro_0653 periplasmic protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004499060.1	KEGG: spe:Spro_0654 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328
YP_004499061.1	KEGG: spe:Spro_0655 hypothetical protein
YP_004499062.1	PFAM: Patatin; KEGG: spe:Spro_0656 patatin
YP_004499063.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: spe:Spro_0657 TatD-related deoxyribonuclease
YP_004499064.1	KEGG: spe:Spro_0659 nucleoside transporter; TIGRFAM: Concentrative nucleoside transporter, metazoan/bacterial; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition
YP_004499065.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; KEGG: spe:Spro_0660 deoxyribose-phosphate aldolase
YP_004499066.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; Pyrimidine nucleoside phosphorylase, C-terminal; TIGRFAM: Thymidine phosphorylase; Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; HAMAP: Thymidine phosphorylase; KEGG: spe:Spro_0661 thymidine phosphorylase
YP_004499067.1	TIGRFAM: Phosphopentomutase; HAMAP: Phosphopentomutase; KEGG: spe:Spro_0662 phosphopentomutase
YP_004499068.1	PFAM: Nucleoside phosphorylase; TIGRFAM: Purine nucleoside phosphorylase; HAMAP: Purine nucleoside phosphorylase deoD-type; KEGG: spe:Spro_0663 purine nucleoside phosphorylase
YP_004499069.1	PFAM: Virulence factor, haemolysin regulator; KEGG: spe:Spro_0665 hypothetical protein
YP_004499070.1	TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: spe:Spro_0666 phosphoserine phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004499071.1	KEGG: spe:Spro_0667 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_004499072.1	TIGRFAM: Nicotinamide-nucleotide adenylyltransferase; Cytidyltransferase-related; PFAM: Helix-turn-helix type 3; Cytidylyltransferase; KEGG: spe:Spro_0668 nicotinamide-nucleotide adenylyltransferase; SMART: Helix-turn-helix type 3
YP_004499073.1	KEGG: spe:Spro_0669 zinc-binding alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004499074.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0670 LysR family transcriptional regulator
YP_004499075.1	TIGRFAM: ATP-binding cassette protein, ChvD family; PFAM: ABC transporter-like; KEGG: spe:Spro_0671 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004499076.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: spe:Spro_0672 OmpA/MotB domain-containing protein
YP_004499077.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: spe:Spro_0673 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004499078.1	KEGG: spe:Spro_0674 hypothetical protein
YP_004499079.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: spe:Spro_0675 lytic murein transglycosylase
YP_004499080.1	TIGRFAM: Trp repressor, bacterial; HAMAP: Trp repressor, bacterial; KEGG: spe:Spro_0676 Trp operon repressor; PFAM: Trp repressor
YP_004499081.1	TIGRFAM: Protein of unknown function DUF84; HAMAP: Protein of unknown function DUF84; KEGG: spe:Spro_0677 NTPase; PFAM: Protein of unknown function DUF84
YP_004499082.1	KEGG: spe:Spro_0678 phosphoglycerate mutase; HAMAP: phosphoglycerate mutase gpmB; PFAM: Phosphoglycerate mutase
YP_004499083.1	KEGG: spe:Spro_0679 AraC family transcriptional regulator; PFAM: Bacterial transcription activator, effector binding; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499084.1	PFAM: CreA; KEGG: spe:Spro_0680 hypothetical protein
YP_004499085.1	KEGG: spe:Spro_0681 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004499086.1	KEGG: spe:Spro_0682 putative RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004499087.1	KEGG: spe:Spro_0683 bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: Aspartate kinase region; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding
YP_004499088.1	TIGRFAM: Homoserine kinase; HAMAP: Homoserine kinase; KEGG: spe:Spro_0684 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal
YP_004499089.1	TIGRFAM: Threonine synthase; KEGG: spe:Spro_0685 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004499090.1	KEGG: spe:Spro_0686 hypothetical protein; HAMAP: UPF0246 protein yaaA; PFAM: Protein of unknown function DUF328
YP_004499091.1	KEGG: spe:Spro_0687 amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; PFAM: Sodium:alanine symporter
YP_004499092.1	TIGRFAM: Transaldolase AB; HAMAP: Transaldolase; KEGG: spe:Spro_0688 transaldolase B; PFAM: Transaldolase
YP_004499093.1	KEGG: spe:Spro_0689 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_004499094.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0690 major facilitator transporter
YP_004499095.1	PFAM: GPR1/FUN34/yaaH; KEGG: spe:Spro_0691 hypothetical protein
YP_004499096.1	TIGRFAM: Chaperone DnaK; HAMAP: Chaperone DnaK; KEGG: spe:Spro_0692 molecular chaperone DnaK; PFAM: Heat shock protein 70
YP_004499097.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Chaperone DnaJ; KEGG: spe:Spro_0693 chaperone protein DnaJ; HAMAP: Chaperone protein dnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich region; Heat shock protein DnaJ, N-terminal
YP_004499098.1	TIGRFAM: Na+/H+ antiporter NhaA; HAMAP: Na+/H+ antiporter NhaA; KEGG: spe:Spro_0694 pH-dependent sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaA
YP_004499099.1	PFAM: HTH transcriptional regulator, LysR; KEGG: spe:Spro_0695 transcriptional activator NhaR
YP_004499100.1	TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: spe:Spro_0696 30S ribosomal protein S20; PFAM: Ribosomal protein S20
YP_004499101.1	TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: spe:Spro_0697 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase
YP_004499102.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; HAMAP: Isoleucyl-tRNA synthetase; KEGG: spe:Spro_0698 isoleucyl-tRNA synthetase
YP_004499103.1	PFAM: Peptidase A8, signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; HAMAP: Peptidase A8, signal peptidase II; KEGG: spe:Spro_0699 lipoprotein signal peptidase
YP_004499104.1	KEGG: spe:Spro_0700 FKBP-type peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004499105.1	PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: spe:Spro_0701 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
YP_004499106.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0702 LysR family transcriptional regulator
YP_004499107.1	PFAM: Pyoverdine biosynthesis; KEGG: spe:Spro_0703 pyoverdine biosynthesis protein
YP_004499108.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: spe:Spro_0704 taurine catabolism dioxygenase TauD/TfdA
YP_004499109.1	KEGG: spe:Spro_0705 glycosyl transferase family protein; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: Glycosyl transferase, family 28
YP_004499110.1	PFAM: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; HAMAP: Dihydrodipicolinate reductase; KEGG: spe:Spro_0712 dihydrodipicolinate reductase
YP_004499111.1	TIGRFAM: Carbamoyl phosphate synthase, small subunit; KEGG: spe:Spro_0713 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004499112.1	TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; KEGG: spe:Spro_0714 carbamoyl phosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like
YP_004499113.1	PFAM: Flavodoxin-like fold; KEGG: spe:Spro_0715 glutathione-regulated potassium-efflux system ancillary protein KefF
YP_004499114.1	KEGG: spe:Spro_0716 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004499115.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0717 lysine exporter protein LysE/YggA
YP_004499116.1	PFAM: Protein of unknown function DUF1212; KEGG: spe:Spro_0718 hypothetical protein
YP_004499117.1	HAMAP: UPF0442 protein yjjB; KEGG: spe:Spro_0719 hypothetical protein
YP_004499118.1	KEGG: spe:Spro_0720 dihydrofolate reductase; PFAM: Dihydrofolate reductase region
YP_004499119.1	PFAM: Protein of unknown function DUF839, bacterial; KEGG: spe:Spro_0721 hypothetical protein
YP_004499120.1	PFAM: Metallophosphoesterase; TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); HAMAP: Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; KEGG: spe:Spro_0722 diadenosine tetraphosphatase
YP_004499121.1	KEGG: spe:Spro_0723 ApaG protein; HAMAP: Protein ApaG; PFAM: ApaG
YP_004499122.1	SMART: Ribosomal RNA adenine methylase transferase, N-terminal; TIGRFAM: Ribosomal RNA adenine dimethylase; KEGG: spe:Spro_0724 dimethyladenosine transferase; HAMAP: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase
YP_004499123.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: spe:Spro_0725 4-hydroxythreonine-4-phosphate dehydrogenase
YP_004499124.1	KEGG: spe:Spro_0726 peptidyl-prolyl cis-trans isomerase SurA; HAMAP: Chaperone surA; PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type
YP_004499125.1	manually curated; HAMAP: LPS-assembly protein lptD; KEGG: spe:Spro_0727 organic solvent tolerance protein; PFAM: Organic solvent tolerance protein; OstA-like protein
YP_004499126.1	HAMAP: DnaJ-like protein djlA; PFAM: Heat shock protein DnaJ, N-terminal; KEGG: spe:Spro_0728 Dna-J like membrane chaperone protein; SMART: Heat shock protein DnaJ, N-terminal
YP_004499127.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spe:Spro_0729 pseudouridine synthase
YP_004499128.1	HAMAP: RNA polymerase-associated protein rapA; PFAM: SNF2-related; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_0730 ATP-dependent helicase HepA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004499129.1	KEGG: spe:Spro_0731 DNA polymerase II; PFAM: DNA-directed DNA polymerase, family B, conserved region; DNA-directed DNA polymerase, family B, exonuclease domain; SMART: DNA-directed DNA polymerase, family B
YP_004499130.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_0732 hypothetical protein
YP_004499131.1	PFAM: Amino acid-binding ACT; KEGG: spe:Spro_0733 acetolactate synthase 1 regulatory subunit
YP_004499132.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: spe:Spro_0734 acetolactate synthase catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004499133.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, thiamine, ATP-binding protein; KEGG: spe:Spro_0735 thiamine transporter ATP-binding subunit; PFAM: ABC transporter-like
YP_004499134.1	KEGG: spe:Spro_0736 thiamine transporter membrane protein; TIGRFAM: Thiamine ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499135.1	KEGG: spe:Spro_0737 thiamine transporter substrate binding subunit; TIGRFAM: Proteobacterial thiamine ABC transporter, periplasmic binding protein; Thiamine ABC transporter periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004499136.1	KEGG: spe:Spro_0738 transcriptional regulator SgrR; HAMAP: HTH-type transcriptional regulator sgrR; PFAM: Bacterial extracellular solute-binding protein, family 5
YP_004499137.1	KEGG: spe:Spro_0739 hypothetical protein
YP_004499138.1	KEGG: spe:Spro_0740 sugar efflux transporter; TIGRFAM: Sugar efflux; PFAM: Major facilitator superfamily MFS-1
YP_004499139.1	KEGG: spe:Spro_0741 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004499140.1	TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; HAMAP: 3-isopropylmalate dehydratase, small subunit region; KEGG: spe:Spro_0742 isopropylmalate isomerase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004499141.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; HAMAP: 3-isopropylmalate dehydratase, large subunit region; KEGG: spe:Spro_0743 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004499142.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; KEGG: spe:Spro_0744 3-isopropylmalate dehydrogenase
YP_004499143.1	TIGRFAM: Bacterial 2-isopropylmalate synthase; KEGG: spe:Spro_0745 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004499144.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spe:Spro_0746 leucine transcriptional activator
YP_004499145.1	KEGG: spe:Spro_0747 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004499146.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: spe:Spro_0748 acetolactate synthase 3 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004499147.1	TIGRFAM: Acetolactate synthase, small subunit; KEGG: spe:Spro_0749 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_004499148.1	TIGRFAM: D-fructose-responsive transcription factor; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_0750 DNA-binding transcriptional regulator FruR; SMART: HTH transcriptional regulator, LacI
YP_004499149.1	PFAM: Protein of unknown function DUF1144; KEGG: spe:Spro_0751 hypothetical protein
YP_004499150.1	TIGRFAM: MraZ; HAMAP: MraZ; KEGG: spe:Spro_0752 cell division protein MraZ; PFAM: MraZ domain
YP_004499151.1	PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; manually curated; KEGG: spe:Spro_0753 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004499152.1	KEGG: spe:Spro_0754 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL
YP_004499153.1	KEGG: spe:Spro_0755 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004499154.1	PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; HAMAP: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: spe:Spro_0756 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
YP_004499155.1	TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; KEGG: spe:Spro_0757 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004499156.1	TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: spe:Spro_0758 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004499157.1	TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; KEGG: spe:Spro_0759 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004499158.1	KEGG: spe:Spro_0760 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein
YP_004499159.1	TIGRFAM: N-acetylglucosaminyltransferase, MurG; HAMAP: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; KEGG: spe:Spro_0761 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal
YP_004499160.1	PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; KEGG: spe:Spro_0762 UDP-N-acetylmuramate--L-alanine ligase
YP_004499161.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: spe:Spro_0763 D-alanine--D-alanine ligase
YP_004499162.1	PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: spe:Spro_0764 cell division protein FtsQ
YP_004499163.1	TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: spe:Spro_0765 cell division protein FtsA; SMART: Cell division protein FtsA domain
YP_004499164.1	KEGG: spe:Spro_0766 cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_004499165.1	TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: spe:Spro_0767 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_004499166.1	PFAM: Protein of unknown function DUF721; KEGG: spe:Spro_0768 hypothetical protein
YP_004499167.1	manually curated; HAMAP: Secretion monitor; KEGG: spe:Spro_0769 SecA regulator SecM; PFAM: Secretion monitor
YP_004499168.1	TIGRFAM: SecA protein; HAMAP: Protein translocase subunit secA; KEGG: spe:Spro_0770 preprotein translocase subunit SecA; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; SecA Wing/Scaffold; SEC-C motif
YP_004499169.1	KEGG: spe:Spro_0771 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: Mutator MutT protein; PFAM: NUDIX hydrolase domain
YP_004499170.1	KEGG: spe:Spro_0772 hypothetical protein; HAMAP: Uncharacterised protein family, zinc-binding; PFAM: Uncharacterised protein family, zinc-binding
YP_004499171.1	KEGG: spe:Spro_0773 hypothetical protein; HAMAP: UPF0289 protein yacF; PFAM: Protein of unknown function DUF1342
YP_004499172.1	TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: spe:Spro_0774 dephospho-CoA kinase
YP_004499173.1	PFAM: IMP dehydrogenase/GMP reductase; TIGRFAM: Guanosine monophosphate reductase 1; HAMAP: GMP reductase; KEGG: spe:Spro_0775 guanosine 5'-monophosphate oxidoreductase
YP_004499174.1	PFAM: Type II secretion system F domain; KEGG: spe:Spro_0776 type IV pilin biogenesis protein
YP_004499175.1	PFAM: Type II secretion system protein E; KEGG: spe:Spro_0777 hypothetical protein
YP_004499176.1	KEGG: spe:Spro_0778 putative major pilin subunit
YP_004499177.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: spe:Spro_0779 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; Peptidoglycan binding-like
YP_004499178.1	KEGG: rah:Rahaq_3711 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004499179.1	KEGG: spe:Spro_0780 regulatory protein AmpE
YP_004499180.1	PFAM: Aminotransferase class-III; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; KEGG: spe:Spro_0781 glutamate-1-semialdehyde aminotransferase
YP_004499181.1	KEGG: spe:Spro_0782 chloride channel protein; HAMAP: H(+)/Cl(-) exchange transporter clcA; PFAM: Chloride channel, voltage gated
YP_004499182.1	TIGRFAM: FeS cluster insertion; HAMAP: Iron--sulfur cluster insertion protein erpA; KEGG: spe:Spro_0783 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis
YP_004499183.1	PFAM: Uncharacterised protein family UPF0126; KEGG: spe:Spro_0785 hypothetical protein
YP_004499184.1	KEGG: spe:Spro_0786 vitamin B12-transporter protein BtuF; HAMAP: Vitamin B12-binding protein; PFAM: Periplasmic binding protein
YP_004499185.1	PFAM: Nucleoside phosphorylase; TIGRFAM: MTA/SAH nucleosidase; HAMAP: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; KEGG: spe:Spro_0787 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_004499186.1	KEGG: spe:Spro_0788 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; HAMAP: Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria; SMART: Metal-dependent phosphohydrolase, HD region
YP_004499187.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: spe:Spro_0789 serine endoprotease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004499188.1	KEGG: spe:Spro_0790 hybrid sensory histidine kinase BarA; PFAM: Protein of unknown function DUF2222; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_004499189.1	TIGRFAM: RelA/SpoT protein; KEGG: spe:Spro_0792 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT
YP_004499190.1	KEGG: spe:Spro_0793 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core
YP_004499191.1	PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; TIGRFAM: CTP synthase; HAMAP: CTP synthase; KEGG: spe:Spro_0794 CTP synthetase
YP_004499192.1	PFAM: Enolase, C-terminal; Enolase, N-terminal; TIGRFAM: Enolase; HAMAP: Enolase; KEGG: ypb:YPTS_0788 phosphopyruvate hydratase
YP_004499193.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: spe:Spro_0796 FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004499194.1	KEGG: spe:Spro_0797 hypothetical protein
YP_004499195.1	TIGRFAM: Methionine gamma-lyase; KEGG: spe:Spro_0798 methionine gamma-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004499196.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_0803 amino acid permease-associated protein
YP_004499197.1	PFAM: Phenylalanine/histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; HAMAP: Histidine ammonia-lyase; KEGG: spe:Spro_0804 histidine ammonia-lyase
YP_004499198.1	PFAM: Urocanase; TIGRFAM: Urocanase; HAMAP: Urocanate hydratase; KEGG: spe:Spro_0805 urocanate hydratase
YP_004499199.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0807 major facilitator transporter
YP_004499200.1	PFAM: Radical SAM; KEGG: spe:Spro_0808 radical SAM domain-containing protein
YP_004499201.1	KEGG: ypb:YPTS_0791 queuosine biosynthesis protein QueD; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related
YP_004499202.1	PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; TIGRFAM: Sulphite reductase [NADPH] flavoprotein, alpha chain; HAMAP: Sulfite reductase [NADPH] flavoprotein alpha-component; KEGG: spe:Spro_0810 sulfite reductase subunit alpha
YP_004499203.1	PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; TIGRFAM: Sulphite reductase (NADPH) hemoprotein, beta subunit; HAMAP: Sulfite reductase [NADPH] hemoprotein beta-component; KEGG: spe:Spro_0811 sulfite reductase subunit beta
YP_004499204.1	PFAM: Phosphoadenosine phosphosulphate reductase; TIGRFAM: Phosphoadenosine phosphosulphate reductase thioredoxin; Phosphoadenosine phosphosulphate reductase CysH-type; HAMAP: Phosphoadenosine phosphosulfate reductase; KEGG: spe:Spro_0812 phosphoadenosine phosphosulfate reductase
YP_004499205.1	PFAM: Peptidase M28; KEGG: spe:Spro_0815 alkaline phosphatase isozyme conversion aminopeptidase
YP_004499206.1	PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; HAMAP: Siroheme synthase; KEGG: spe:Spro_0817 uroporphyrin-III C-methyltransferase
YP_004499207.1	PFAM: Phosphoadenosine phosphosulphate reductase; TIGRFAM: Sulphate adenylyltransferase, small subunit; HAMAP: Sulfate adenylyltransferase subunit 2; KEGG: spe:Spro_0818 sulfate adenylyltransferase subunit 2
YP_004499208.1	PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; TIGRFAM: Sulphate adenylyltransferase, large subunit; Small GTP-binding protein; HAMAP: Sulfate adenylyltransferase subunit 1; KEGG: spe:Spro_0819 sulfate adenylyltransferase subunit 1
YP_004499209.1	PFAM: Adenylylsulphate kinase, C-terminal; TIGRFAM: Adenylylsulphate kinase, C-terminal; HAMAP: Adenylyl-sulfate kinase; KEGG: spe:Spro_0820 adenylyl-sulfate kinase
YP_004499210.1	KEGG: spe:Spro_0821 hypothetical protein
YP_004499211.1	KEGG: spe:Spro_0825 cell division protein FtsB; HAMAP: Cell division protein ftsB-like protein; PFAM: Septum formation initiator
YP_004499212.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: spe:Spro_0826 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_004499213.1	TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: spe:Spro_0827 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_004499214.1	TIGRFAM: Pseudouridine synthase, TruD; HAMAP: tRNA pseudouridine synthase D; KEGG: spe:Spro_0828 tRNA pseudouridine synthase D; PFAM: Pseudouridine synthase, TruD
YP_004499215.1	PFAM: Survival protein SurE-like phosphatase/nucleotidase; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; HAMAP: Multifunctional protein surE; KEGG: spe:Spro_0829 stationary phase survival protein SurE
YP_004499216.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; HAMAP: Protein-L-isoaspartate O-methyltransferase; KEGG: spe:Spro_0830 protein-L-isoaspartate O-methyltransferase
YP_004499217.1	KEGG: spe:Spro_0831 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004499218.1	KEGG: spe:Spro_0832 RNA polymerase sigma factor RpoS; TIGRFAM: RNA polymerase sigma factor RpoS, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4
YP_004499219.1	SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; TIGRFAM: DNA mismatch repair protein MutS, type 1; KEGG: spe:Spro_0833 DNA mismatch repair protein MutS; HAMAP: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, clamp
YP_004499220.1	KEGG: spe:Spro_0834 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB; TIGRFAM: Phosphotransferase system, EIIB component, type 3, subgroup; PFAM: Phosphotransferase system, lactose/cellobiose-specific IIB subunit
YP_004499221.1	TIGRFAM: Phosphotransferase system, cellobiose-specific IIC component; Phosphotransferase system, lactose/cellobiose IIC component; KEGG: spe:Spro_0835 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; PFAM: Phosphotransferase system, EIIC
YP_004499222.1	KEGG: spe:Spro_0836 beta-glucosidase; PFAM: Glycoside hydrolase, family 1
YP_004499223.1	KEGG: spe:Spro_0837 DNA-binding transcriptional regulator ChbR; PFAM: Helix-turn-helix, AraC type; Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC domain
YP_004499224.1	KEGG: spe:Spro_0838 hypothetical protein; HAMAP: UPF0249 protein chbG; PFAM: YdjC-like protein
YP_004499225.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0839 major facilitator transporter
YP_004499226.1	KEGG: spe:Spro_0840 competence damage-inducible protein A; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal
YP_004499227.1	SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: spe:Spro_0841 recombinase A; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA
YP_004499228.1	KEGG: spe:Spro_0842 recombination regulator RecX; HAMAP: Regulatory protein recX; PFAM: Regulatory protein RecX
YP_004499229.1	KEGG: spe:Spro_0843 alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1
YP_004499230.1	KEGG: xne:XNC1_1263 carbon storage regulator, post-translational activator of flhDC expression, regulates biofilm formation, RNA-binding; TIGRFAM: Carbon storage regulator; PFAM: Carbon storage regulator
YP_004499231.1	KEGG: spe:Spro_0845 fructose-1-phosphatase; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004499232.1	KEGG: spe:Spro_0846 hypothetical protein
YP_004499233.1	TIGRFAM: Glutamate--cysteine ligase, monofunctional; HAMAP: Glutamate--cysteine ligase; KEGG: spe:Spro_0847 glutamate--cysteine ligase; PFAM: Glutamate--cysteine ligase
YP_004499234.1	HAMAP: S-ribosylhomocysteinase (LuxS); KEGG: spe:Spro_0848 S-ribosylhomocysteinase; PFAM: S-ribosylhomocysteinase (LuxS)
YP_004499235.1	PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: spe:Spro_0849 hypothetical protein
YP_004499236.1	PFAM: Cytochrome c assembly protein; KEGG: spe:Spro_0850 cytochrome c assembly protein
YP_004499237.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; KEGG: spe:Spro_0851 signal recognition particle protein; SMART: ATPase, AAA+ type, core
YP_004499238.1	KEGG: spe:Spro_0852 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16
YP_004499239.1	TIGRFAM: 16S rRNA processing protein RimM; HAMAP: 16S rRNA processing protein RimM; KEGG: spe:Spro_0853 16S rRNA-processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_004499240.1	PFAM: tRNA (guanine-N1-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: spe:Spro_0854 tRNA (guanine-N(1)-)-methyltransferase
YP_004499241.1	TIGRFAM: Ribosomal protein L19; HAMAP: Ribosomal protein L19; KEGG: spe:Spro_0855 50S ribosomal protein L19; PFAM: Ribosomal protein L19
YP_004499242.1	PFAM: Phage transcriptional activator, Ogr/Delta; KEGG: spe:Spro_0856 transcriptional activator Ogr/delta
YP_004499243.1	PFAM: Phage late control D; KEGG: yps:YPTB1739 D protein bacteriophage 186 and P2
YP_004499244.1	PFAM: Phage P2 GpU; KEGG: spe:Spro_0858 P2 GpU family protein
YP_004499245.1	KEGG: spe:Spro_0859 TP901 family phage tail tape measure protein; TIGRFAM: Phage tail tape measure protein TP901, core region; PFAM: Phage tail tape measure protein TP901, core region
YP_004499246.1	KEGG: spe:Spro_0860 P2 GpE family protein; manually curated; PFAM: Phage P2 GpE
YP_004499247.1	PFAM: Phage tail E; KEGG: spe:Spro_0861 tail E family protein
YP_004499248.1	KEGG: spe:Spro_0862 phage major tail tube protein; TIGRFAM: Phage major tail tube protein; PFAM: Phage major tail tube protein
YP_004499249.1	KEGG: spe:Spro_0863 tail sheath protein
YP_004499250.1	PFAM: Phage tail assembly chaperone gp38; KEGG: pam:PANA_3405 hypothetical protein
YP_004499251.1	PFAM: Phage tail fiber repeat 2; KEGG: spe:Spro_0865 tail fiber repeat 2-containing protein
YP_004499252.1	KEGG: spe:Spro_0866 phage tail protein I; TIGRFAM: Phage tail protein I; PFAM: Phage tail protein I
YP_004499253.1	PFAM: Baseplate assembly protein J-like, predicted; KEGG: spe:Spro_0867 baseplate J family protein
YP_004499254.1	PFAM: GPW/gp25; KEGG: spe:Spro_0868 gpW/GP25 family protein
YP_004499255.1	KEGG: spe:Spro_0869 phage baseplate assembly protein V; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V
YP_004499256.1	PFAM: P2 phage tail completion R; KEGG: spe:Spro_0870 P2 phage tail completion R family protein
YP_004499257.1	PFAM: Glycoside hydrolase, family 24; KEGG: spe:Spro_0871 glycoside hydrolase family protein
YP_004499258.1	KEGG: spe:Spro_0872 prophage Hp1 family holin
YP_004499259.1	PFAM: Phage tail protein X; KEGG: spe:Spro_0873 tail X family protein
YP_004499260.1	KEGG: rah:Rahaq_0725 hypothetical protein
YP_004499261.1	KEGG: spe:Spro_0875 TraR/DksA family transcriptional regulator; manually curated; TIGRFAM: Zinc finger, C4 DksA/TraR-type
YP_004499262.1	KEGG: spe:Spro_0876 gpB bacteriophage P2-like protein
YP_004499263.1	PFAM: Bacteriophage CI repressor; KEGG: spe:Spro_0877 CI repressor
YP_004499264.1	PFAM: Protein of unknown function DUF481; KEGG: spe:Spro_0878 hypothetical protein
YP_004499265.1	TIGRFAM: DHAP synthase, class 1; KEGG: spe:Spro_0879 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004499266.1	KEGG: spe:Spro_0880 bifunctional chorismate mutase/prephenate dehydrogenase; TIGRFAM: Chorismate mutase, T-protein; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase
YP_004499267.1	KEGG: spe:Spro_0881 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: Chorismate mutase, gammaproteobacteria; PFAM: Prephenate dehydratase; Chorismate mutase, type II
YP_004499268.1	KEGG: spe:Spro_0882 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004499269.1	TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: spe:Spro_0883 outer membrane protein assembly complex subunit YfiO
YP_004499270.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_0884 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4
YP_004499271.1	KEGG: spe:Spro_0885 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_004499272.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: spe:Spro_0886 protein disaggregation chaperone; SMART: ATPase, AAA+ type, core
YP_004499273.1	manually curated; KEGG: spe:Spro_0888 hypothetical protein
YP_004499274.1	KEGG: spe:Spro_0889 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004499275.1	KEGG: spe:Spro_0890 putative acyl carrier protein
YP_004499276.1	PFAM: Phosphopantetheine-binding; KEGG: spe:Spro_0891 acyl carrier protein
YP_004499277.1	KEGG: spe:Spro_0892 hypothetical protein
YP_004499278.1	PFAM: AMP-dependent synthetase/ligase; KEGG: spe:Spro_0893 putative AMP-binding protein
YP_004499279.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: spe:Spro_0894 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004499280.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_0895 glycosyl transferase family protein
YP_004499281.1	PFAM: Thioesterase superfamily; KEGG: spe:Spro_0896 thioesterase superfamily protein
YP_004499282.1	KEGG: spe:Spro_0897 putative outer-membrane lipoprotein carrier protein
YP_004499283.1	KEGG: spe:Spro_0898 hypothetical protein
YP_004499284.1	KEGG: spe:Spro_0899 putative lipoprotein
YP_004499285.1	KEGG: spe:Spro_0900 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004499286.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: spe:Spro_0901 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004499287.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; KEGG: spe:Spro_0902 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499288.1	KEGG: spe:Spro_0903 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004499289.1	KEGG: spe:Spro_0904 2,5-diketo-D-gluconate reductase B; PFAM: Aldo/keto reductase
YP_004499290.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0905 LysR family transcriptional regulator
YP_004499291.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0906 major facilitator transporter
YP_004499292.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_0907 hypothetical protein
YP_004499293.1	manually curated; PFAM: Lytic transglycosylase-like, catalytic; MLTD-N; Peptidoglycan-binding lysin domain; KEGG: spe:Spro_0908 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding Lysin subgroup
YP_004499294.1	KEGG: spe:Spro_0909 hydroxyacylglutathione hydrolase; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase
YP_004499295.1	PFAM: Methyltransferase type 11; KEGG: spe:Spro_0910 type 11 methyltransferase
YP_004499296.1	HAMAP: Ribonuclease H; KEGG: spe:Spro_0911 ribonuclease H; PFAM: Ribonuclease H
YP_004499297.1	SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: spe:Spro_0912 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004499298.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: spe:Spro_0913 cytosine/purines uracil thiamine allantoin permease
YP_004499299.1	KEGG: spe:Spro_0914 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004499300.1	KEGG: spe:Spro_0915 Asp/Glu racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004499301.1	TIGRFAM: Putative urate catabolism protein; KEGG: spe:Spro_0916 chitin deacetylase; PFAM: Polysaccharide deacetylase
YP_004499302.1	KEGG: spe:Spro_0917 XRE family transcriptional regulator
YP_004499303.1	PFAM: Protein of unknown function DUF891; KEGG: gca:Galf_2192 hypothetical protein
YP_004499304.1	KEGG: spe:Spro_0918 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004499305.1	KEGG: spe:Spro_0919 L-lysine 6-monooxygenase (NADPH)
YP_004499306.1	PFAM: IucA/IucC; KEGG: spe:Spro_0920 IucA/IucC family protein
YP_004499307.1	PFAM: Siderophore biosynthesis protein, conserved region; KEGG: spe:Spro_0921 aerobactin siderophore biosynthesis protein IucB
YP_004499308.1	PFAM: IucA/IucC; KEGG: spe:Spro_0922 IucA/IucC family protein
YP_004499309.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_0923 major facilitator transporter
YP_004499310.1	PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: spe:Spro_0924 FAD-binding 9 siderophore-interacting domain-containing protein
YP_004499311.1	KEGG: spe:Spro_0927 hypothetical protein
YP_004499312.1	KEGG: spe:Spro_0928 amidase; TIGRFAM: Amidohydrolase, AtzE type; PFAM: Amidase
YP_004499313.1	KEGG: spe:Spro_0929 hypothetical protein
YP_004499314.1	KEGG: spe:Spro_0930 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004499315.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: spe:Spro_0931 RpiR family transcriptional regulator
YP_004499316.1	KEGG: spe:Spro_0932 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004499317.1	KEGG: spe:Spro_0933 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499318.1	KEGG: spe:Spro_0934 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499319.1	PFAM: ABC transporter-like; KEGG: spe:Spro_0935 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499320.1	KEGG: spe:Spro_0936 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004499321.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: spe:Spro_0937 allantoate amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004499322.1	KEGG: spe:Spro_0938 putative urate oxidase, N-terminal; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
YP_004499323.1	KEGG: spe:Spro_0939 transthyretin; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase
YP_004499324.1	KEGG: eta:ETA_26130 xanthine/uracil permease family protein; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004499325.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_0940 hypothetical protein
YP_004499326.1	KEGG: spe:Spro_0941 putative aminotransferase; PFAM: Aminotransferase, class I/II
YP_004499327.1	PFAM: Class II aldolase/adducin, N-terminal; TIGRFAM: Methylthioribulose-1-phosphate dehydratase; HAMAP: Methylthioribulose-1-phosphate dehydratase; KEGG: spe:Spro_0942 methylthioribulose-1-phosphate dehydratase
YP_004499328.1	PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; HAMAP: Enolase-phosphatase E1; KEGG: spe:Spro_0943 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_004499329.1	HAMAP: Acireductone dioxygenase; KEGG: spe:Spro_0944 acireductone dioxygenase ARD; PFAM: Acireductone dioxygenase, ARD
YP_004499330.1	PFAM: Initiation factor 2B related; TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; HAMAP: Methylthioribose-1-phosphate isomerase; KEGG: spe:Spro_0945 eIF-2B alpha/beta/delta-related hypothetical protein
YP_004499331.1	PFAM: Aminoglycoside phosphotransferase; TIGRFAM: Methylthioribose kinase; HAMAP: Methylthioribose kinase; KEGG: spe:Spro_0946 methylthioribose kinase
YP_004499332.1	PFAM: Hok/gef cell toxic protein; KEGG: spe:Spro_0948 Hok/gef cell toxic protein
YP_004499333.1	KEGG: pay:PAU_03376 hypothetical protein
YP_004499334.1	PFAM: Hok/gef cell toxic protein; KEGG: spe:Spro_0948 Hok/gef cell toxic protein
YP_004499335.1	PFAM: Protein of unknown function DUF1974; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: spe:Spro_0949 acyl-CoA dehydrogenase
YP_004499336.1	KEGG: spe:Spro_0950 phosphoheptose isomerase; TIGRFAM: Phosphoheptose isomerase, subgroup; PFAM: Sugar isomerase (SIS)
YP_004499337.1	PFAM: Glutamine amidotransferase, class-II; KEGG: spe:Spro_0951 glutamine amidotransferase class-II
YP_004499338.1	PFAM: YkuD domain; KEGG: spe:Spro_0952 hypothetical protein
YP_004499339.1	TIGRFAM: Na-translocating NADH-quinone reductase subunit A; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; KEGG: spe:Spro_0953 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A
YP_004499340.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit B; KEGG: spe:Spro_0954 Na(+)-translocating NADH-quinone reductase subunit B; PFAM: NADH-quinone reductase NQR2/RnfD
YP_004499341.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit C; KEGG: spe:Spro_0955 Na(+)-translocating NADH-quinone reductase subunit C; PFAM: FMN-binding
YP_004499342.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit D; KEGG: spe:Spro_0956 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr
YP_004499343.1	TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; KEGG: spe:Spro_0957 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr
YP_004499344.1	PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; HAMAP: Na(+)-translocating NADH-quinone reductase subunit F; KEGG: spe:Spro_0958 Na(+)-translocating NADH-quinone reductase subunit F
YP_004499345.1	PFAM: ApbE-like lipoprotein; KEGG: spe:Spro_0959 ApbE family lipoprotein
YP_004499346.1	PFAM: Protein of unknown function DUF539; KEGG: spe:Spro_0960 hypothetical protein
YP_004499347.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: spe:Spro_0961 glycerophosphoryl diester phosphodiesterase
YP_004499348.1	HAMAP: DNA polymerase IV; KEGG: spe:Spro_0962 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like
YP_004499349.1	TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; KEGG: spe:Spro_0963 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20
YP_004499350.1	HAMAP: Xanthine phosphoribosyltransferase; KEGG: spe:Spro_0964 xanthine-guanine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004499351.1	HAMAP: Esterase frsA; KEGG: spe:Spro_0965 fermentation/respiration switch protein
YP_004499352.1	KEGG: spe:Spro_0966 DNA-binding transcriptional regulator Crl; HAMAP: Sigma factor-binding protein crl; PFAM: Transcriptional regulator Crl
YP_004499353.1	SMART: Pseudouridine synthase/archaeosine transglycosylase; TIGRFAM: Glutamate 5-kinase, ProB-related; KEGG: spe:Spro_0967 gamma-glutamyl kinase; HAMAP: Glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase
YP_004499354.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; HAMAP: Glutamate-5-semialdehyde dehydrogenase; KEGG: spe:Spro_0968 gamma-glutamyl phosphate reductase
YP_004499355.1	TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: ilo:IL2519 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD region
YP_004499356.1	KEGG: eca:ECA0965 putative regulatory protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004499357.1	KEGG: spe:Spro_0971 hypothetical protein
YP_004499358.1	KEGG: spe:Spro_0972 cytochrome b561
YP_004499359.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_0973 extracellular solute-binding protein
YP_004499360.1	PFAM: Condensation domain; KEGG: spe:Spro_0974 condensation domain-containing protein
YP_004499361.1	TIGRFAM: Amino acid adenylation; KEGG: pay:PAU_00882 six-domain nonribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Non-ribosomal peptide synthetase; Condensation domain
YP_004499362.1	KEGG: pay:PAU_00881 six-domain nonribosomal peptide synthetase; PFAM: Condensation domain; Non-ribosomal peptide synthetase
YP_004499363.1	KEGG: spe:Spro_0977 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004499364.1	KEGG: spe:Spro_0978 condensation domain-containing protein; PFAM: Condensation domain; Phosphopantetheine-binding
YP_004499365.1	KEGG: spe:Spro_0979 hypothetical protein
YP_004499366.1	KEGG: spe:Spro_0981 hypothetical protein
YP_004499367.1	KEGG: spe:Spro_0982 hypothetical protein
YP_004499368.1	PFAM: DSBA oxidoreductase; KEGG: spe:Spro_0983 DsbA oxidoreductase
YP_004499369.1	KEGG: spe:Spro_0984 DNA-binding transcriptional activator FeaR; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499370.1	KEGG: spe:Spro_0985 phenylacetaldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004499371.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_0986 leucine export protein LeuE
YP_004499372.1	KEGG: spe:Spro_0987 tellurite resistance protein TehB; TIGRFAM: Tellurite resistance methyltransferase, TehB; PFAM: Tellurite resistance methyltransferase, TehB, core; Protein of unknown function DUF1971
YP_004499373.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bam:Bamb_4829 GCN5-related N-acetyltransferase
YP_004499374.1	PFAM: Protein of unknown function DUF1615; KEGG: spe:Spro_0988 hypothetical protein
YP_004499375.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: spe:Spro_0989 glutathione S-transferase domain-containing protein
YP_004499376.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_0990 alpha/beta hydrolase fold domain-containing protein
YP_004499377.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0991 LysR family transcriptional regulator
YP_004499378.1	KEGG: spe:Spro_0992 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004499379.1	PFAM: Antimicrobial peptide resistance/lipid A acylation PagP; KEGG: spe:Spro_0993 palmitoyl transferase
YP_004499380.1	PFAM: Protein of unknown function DUF2501; KEGG: spe:Spro_0994 hypothetical protein
YP_004499381.1	PFAM: Protein of unknown function DUF333; KEGG: spe:Spro_0995 hypothetical protein
YP_004499382.1	KEGG: spe:Spro_0996 hypothetical protein
YP_004499383.1	KEGG: spe:Spro_0997 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004499384.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_0998 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004499385.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_0999 LysR family transcriptional regulator
YP_004499386.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: spe:Spro_1000 pirin domain-containing protein
YP_004499387.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_1001 isochorismatase hydrolase
YP_004499388.1	KEGG: spe:Spro_1002 hypothetical protein
YP_004499389.1	PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: spe:Spro_1003 putative thiol-disulfide oxidoreductase DCC
YP_004499390.1	KEGG: spe:Spro_1004 hypothetical protein
YP_004499391.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1005 GCN5-related N-acetyltransferase
YP_004499392.1	PFAM: Protein of unknown function DUF2076; KEGG: spe:Spro_1006 putative periplasmic ligand-binding sensor protein
YP_004499393.1	SMART: Helix-turn-helix type 3; KEGG: spe:Spro_1007 XRE family transcriptional regulator
YP_004499394.1	PFAM: Methyltransferase type 11; KEGG: spe:Spro_1008 type 11 methyltransferase
YP_004499395.1	TIGRFAM: Aquaporin; HAMAP: Aquaporin Z; KEGG: spe:Spro_1009 aquaporin Z; PFAM: Major intrinsic protein
YP_004499396.1	KEGG: spe:Spro_1010 hypothetical protein
YP_004499397.1	PFAM: Bacterial low temperature requirement A; KEGG: spe:Spro_1011 low temperature requirement A
YP_004499398.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_1012 hypothetical protein
YP_004499399.1	KEGG: spe:Spro_1013 methyltransferase
YP_004499400.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1014 GCN5-related N-acetyltransferase
YP_004499401.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_1015 periplasmic binding protein
YP_004499402.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1017 GCN5-related N-acetyltransferase
YP_004499403.1	HAMAP: Shikimate kinase; KEGG: spe:Spro_1018 shikimate kinase II; PFAM: Shikimate kinase
YP_004499404.1	KEGG: dze:Dd1591_3492 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004499405.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: eca:ECA3294 TetR family transcriptional regulator
YP_004499406.1	KEGG: spe:Spro_1019 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499407.1	KEGG: spe:Spro_1020 hypothetical protein
YP_004499408.1	KEGG: spe:Spro_1021 hypothetical protein
YP_004499409.1	KEGG: spe:Spro_1026 hypothetical protein; HAMAP: Protein of unknown function DUF1255; PFAM: Protein of unknown function DUF1255
YP_004499410.1	KEGG: spe:Spro_1027 recombination associated protein; HAMAP: Recombination-associated protein rdgC; PFAM: Putative exonuclease, RdgC
YP_004499411.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; KEGG: spe:Spro_1028 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; PAS; Signal transduction response regulator, receiver region
YP_004499412.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1029 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499413.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_1030 monosaccharide-transporting ATPase
YP_004499414.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_1031 periplasmic binding protein/LacI transcriptional regulator
YP_004499415.1	PFAM: Protein of unknown function DUF1498; KEGG: spe:Spro_1032 hypothetical protein
YP_004499416.1	TIGRFAM: Ketose-bisphosphate aldolase, class-II; KEGG: spe:Spro_1033 hypothetical protein; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004499417.1	PFAM: Carbohydrate/purine kinase; KEGG: spe:Spro_1034 ribokinase-like domain-containing protein
YP_004499418.1	KEGG: spe:Spro_1035 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004499419.1	PFAM: ROK; KEGG: spe:Spro_1036 ROK family protein
YP_004499420.1	KEGG: spe:Spro_1037 prevent-host-death family protein
YP_004499421.1	PFAM: PilT protein, N-terminal; KEGG: spe:Spro_1038 PilT domain-containing protein
YP_004499422.1	PFAM: CAT RNA-binding region; PRD; KEGG: pwa:Pecwa_2743 transcriptional antiterminator, BglG
YP_004499423.1	KEGG: pao:Pat9b_0891 ethanolamine transporter; TIGRFAM: Ethanolamine permease; PFAM: Amino acid permease-associated region
YP_004499424.1	KEGG: spe:Spro_1039 exonuclease SbcC; TIGRFAM: Exonuclease SbcC; PFAM: RecF/RecN/SMC protein, N-terminal
YP_004499425.1	KEGG: spe:Spro_1040 exonuclease subunit SbcD; TIGRFAM: Exonuclease SbcD; PFAM: Metallophosphoesterase
YP_004499426.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG: spe:Spro_1041 two component transcriptional regulator; SMART: Signal transduction response regulator, receiver region
YP_004499427.1	TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; KEGG: spe:Spro_1042 phosphate regulon sensor protein; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS
YP_004499428.1	TIGRFAM: Phosphate binding protein; KEGG: spe:Spro_1043 phosphate binding protein
YP_004499429.1	PFAM: Methionine synthase, vitamin-B12 independent; KEGG: spe:Spro_1044 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
YP_004499430.1	manually curated; TIGRFAM: Branched-chain amino acid transport system II carrier protein; KEGG: spe:Spro_1045 branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein
YP_004499431.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_1046 putative proline-specific permease
YP_004499432.1	KEGG: spe:Spro_1047 hypothetical protein
YP_004499433.1	PFAM: Mechanosensitive ion channel MscS; KEGG: spe:Spro_1048 mechanosensitive ion channel MscS
YP_004499434.1	PFAM: Glycosyl hydrolase, family 13, catalytic region; Glycoside hydrolase, family 13, N-terminal Ig-like region; KEGG: spe:Spro_1049 maltodextrin glucosidase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004499435.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: spe:Spro_1057 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004499436.1	KEGG: spe:Spro_1058 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal
YP_004499437.1	HAMAP: Acyl carrier protein phosphodiesterase; KEGG: spe:Spro_1059 (acyl-carrier-protein) phosphodiesterase; PFAM: Acyl carrier protein phosphodiesterase
YP_004499438.1	TIGRFAM: Queuosine biosynthesis protein; HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; KEGG: spe:Spro_1060 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004499439.1	PFAM: Queuine/other tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; KEGG: spe:Spro_1061 queuine tRNA-ribosyltransferase
YP_004499440.1	KEGG: spe:Spro_1062 preprotein translocase subunit YajC; TIGRFAM: YajC; PFAM: YajC
YP_004499441.1	KEGG: spe:Spro_1063 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_004499442.1	KEGG: spe:Spro_1064 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein
YP_004499443.1	KEGG: spe:Spro_1070 hypothetical protein
YP_004499444.1	KEGG: spe:Spro_1071 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone
YP_004499445.1	TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: spe:Spro_1072 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding
YP_004499446.1	TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: spe:Spro_1073 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004499447.1	TIGRFAM: NusB antitermination factor; HAMAP: N utilization substance protein B-like protein; KEGG: spe:Spro_1074 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44
YP_004499448.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: spe:Spro_1075 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004499449.1	KEGG: spe:Spro_1076 phosphatidylglycerophosphatase A; PFAM: Phosphatidylglycerophosphatase A
YP_004499450.1	KEGG: spe:Spro_1077 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004499451.1	PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: spe:Spro_1078 1-deoxy-D-xylulose-5-phosphate synthase
YP_004499452.1	KEGG: spe:Spro_1079 geranyltranstransferase; PFAM: Polyprenyl synthetase
YP_004499453.1	TIGRFAM: Exonuclease VII, small subunit; HAMAP: Exonuclease VII, small subunit; KEGG: spe:Spro_1080 exodeoxyribonuclease VII small subunit; PFAM: Exonuclease VII, small subunit
YP_004499454.1	TIGRFAM: Thiamine biosynthesis protein; HAMAP: Thiamine biosynthesis protein; KEGG: spe:Spro_1081 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP
YP_004499455.1	KEGG: spe:Spro_1082 DJ-1 family protein; TIGRFAM: DJ-1; PFAM: ThiJ/PfpI
YP_004499456.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: spe:Spro_1083 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_004499457.1	KEGG: spe:Spro_1084 putative nucleotide-binding protein; HAMAP: UPF0234 protein yajQ; PFAM: Protein of unknown function DUF520
YP_004499458.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1085 major facilitator transporter
YP_004499459.1	TIGRFAM: Protohaem IX farnesyltransferase; HAMAP: Protohaem IX farnesyltransferase; KEGG: spe:Spro_1086 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_004499460.1	KEGG: spe:Spro_1087 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: Cytochrome C oxidase subunit IV prokaryotic
YP_004499461.1	KEGG: spe:Spro_1088 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III
YP_004499462.1	TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I; KEGG: spe:Spro_1089 cytochrome o ubiquinol oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_004499463.1	KEGG: spe:Spro_1090 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal
YP_004499464.1	KEGG: spe:Spro_1091 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: Major facilitator superfamily MFS-1
YP_004499465.1	PFAM: Uncharacterised protein family, YajG; KEGG: spe:Spro_1092 hypothetical protein
YP_004499466.1	PFAM: BolA-like protein; KEGG: spe:Spro_1093 transcriptional regulator BolA
YP_004499467.1	TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: spe:Spro_1094 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial
YP_004499468.1	PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: spe:Spro_1095 ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004499469.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: spe:Spro_1096 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal
YP_004499470.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: spe:Spro_1097 DNA-binding ATP-dependent protease La; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_004499471.1	KEGG: spe:Spro_1098 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004499472.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: spe:Spro_1099 peptidyl-prolyl cis-trans isomerase D
YP_004499473.1	TIGRFAM: Competence protein ComEA, helix-hairpin-helix region; KEGG: spe:Spro_1100 helix-hairpin-helix repeat-containing competence protein ComEA
YP_004499474.1	KEGG: spe:Spro_1101 thioesterase superfamily protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004499475.1	KEGG: spe:Spro_1102 queuosine biosynthesis protein QueC; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; PFAM: Queuosine synthesis-like
YP_004499476.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_1103 extracellular solute-binding protein
YP_004499477.1	TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; HAMAP: HMP-PP phosphatase; KEGG: spe:Spro_1104 Cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3
YP_004499478.1	KEGG: spe:Spro_1105 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004499479.1	KEGG: spe:Spro_1106 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004499480.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: spe:Spro_1107 putative multidrug transporter membrane\ATP-binding components; SMART: ATPase, AAA+ type, core
YP_004499481.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: spe:Spro_1108 putative multidrug transporter membrane\ATP-binding components; SMART: ATPase, AAA+ type, core
YP_004499482.1	PFAM: Nitrogen regulatory protein PII; KEGG: pao:Pat9b_0957 nitrogen regulatory protein P-II
YP_004499483.1	KEGG: spe:Spro_1110 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter
YP_004499484.1	TIGRFAM: Acyl-CoA thioesterase; KEGG: spe:Spro_1111 acyl-CoA thioesterase II; PFAM: Acyl-CoA thioesterase
YP_004499485.1	KEGG: spe:Spro_1112 putative lipoprotein
YP_004499486.1	KEGG: spe:Spro_1113 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004499487.1	PFAM: Integrase, catalytic core, phage; KEGG: asa:ASA_1922 phage integrase family site specific recombinase
YP_004499488.1	KEGG: pct:PC1_2623 hypothetical protein
YP_004499491.1	PFAM: Integrase, catalytic core, phage; KEGG: shm:Shewmr7_1771 phage integrase family protein
YP_004499497.1	KEGG: asa:ASA_1924 hypothetical protein
YP_004499500.1	KEGG: eoj:ECO26_0311 hypothetical protein
YP_004499501.1	KEGG: eoj:ECO26_0312 hypothetical protein
YP_004499503.1	KEGG: enc:ECL_04200 hypothetical protein
YP_004499504.1	PFAM: DNA N-6-adenine-methyltransferase; KEGG: ecw:EcE24377A_1400 phage N-6-adenine-methyltransferase
YP_004499505.1	KEGG: xau:Xaut_3656 hypothetical protein
YP_004499506.1	PFAM: Haemolysin expression modulating, HHA; KEGG: rah:Rahaq_3328 hemolysin expression modulating family protein
YP_004499507.1	PFAM: Biofilm formation regulator YbaJ; KEGG: spe:Spro_1119 hypothetical protein
YP_004499508.1	KEGG: spe:Spro_1120 hypothetical protein
YP_004499509.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1121 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499510.1	PFAM: ABC-3; KEGG: spe:Spro_1122 ABC-3 protein
YP_004499511.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: spe:Spro_1123 periplasmic solute binding protein
YP_004499512.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: spe:Spro_1124 50S ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004499513.1	TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31 type B; KEGG: spe:Spro_1125 50S ribosomal protein L31 type B; PFAM: Ribosomal protein L31
YP_004499514.1	KEGG: spe:Spro_1126 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004499515.1	KEGG: spe:Spro_1127 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004499516.1	PFAM: Transcriptional regulator, MAATS, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1128 DNA-binding transcriptional repressor AcrR
YP_004499517.1	PFAM: Sulphur relay, DsrE-like protein; KEGG: spe:Spro_1129 DsrE family protein
YP_004499518.1	PFAM: Mechanosensitive ion channel MscS; KEGG: spe:Spro_1130 potassium efflux protein KefA
YP_004499519.1	PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: spe:Spro_1131 hypothetical protein
YP_004499520.1	PFAM: Primosomal replication priB/priC; KEGG: spe:Spro_1132 primosomal replication PriB and PriC
YP_004499521.1	PFAM: Protein of unknown function DUF454; KEGG: spe:Spro_1133 hypothetical protein
YP_004499522.1	TIGRFAM: Adenine phosphoribosyl transferase; HAMAP: Adenine phosphoribosyl transferase; KEGG: spe:Spro_1134 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004499523.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: spe:Spro_1135 DNA polymerase III subunits gamma and tau; SMART: ATPase, AAA+ type, core
YP_004499524.1	TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: cro:ROD_05291 hypothetical protein; PFAM: Uncharacterised protein family UPF0133
YP_004499525.1	SMART: Toprim domain, subgroup; TIGRFAM: RecR protein; KEGG: spe:Spro_1137 recombination protein RecR; HAMAP: Recombination protein recR; PFAM: Toprim domain; Zinc finger C4-type, RecR
YP_004499526.1	HAMAP: Chaperone protein htpG; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; KEGG: spe:Spro_1138 heat shock protein 90; SMART: ATP-binding region, ATPase-like
YP_004499527.1	TIGRFAM: Adenylate kinase, subfamily; HAMAP: Adenylate kinase; KEGG: spe:Spro_1139 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region
YP_004499528.1	PFAM: Putative sugar diacid recognition; KEGG: spe:Spro_1140 transcriptional regulator CdaR
YP_004499529.1	PFAM: Divalent ion symporter; KEGG: spe:Spro_1141 gluconate transporter
YP_004499530.1	TIGRFAM: Glycerate kinase; KEGG: spe:Spro_1142 glycerate kinase; PFAM: Glycerate kinase
YP_004499531.1	PFAM: Ferrochelatase; TIGRFAM: Ferrochelatase; HAMAP: Ferrochelatase; KEGG: spe:Spro_1143 ferrochelatase
YP_004499532.1	KEGG: spe:Spro_1144 inosine kinase; PFAM: Carbohydrate/purine kinase
YP_004499533.1	KEGG: spe:Spro_1145 putative cation:proton antiport protein; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004499534.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1146 major facilitator transporter
YP_004499535.1	KEGG: spe:Spro_1147 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_004499536.1	KEGG: spe:Spro_1148 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00011; PFAM: YbaK/aminoacyl-tRNA synthetase associated region
YP_004499537.1	PFAM: GumN; KEGG: spe:Spro_1149 GumN family protein
YP_004499538.1	TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: yen:YE3061 copper exporting ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004499539.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: spe:Spro_1151 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004499540.1	KEGG: spe:Spro_3097 hypothetical protein
YP_004499541.1	PFAM: Nodulation efficiency, NfeD; KEGG: spe:Spro_1152 hypothetical protein
YP_004499542.1	KEGG: spe:Spro_1153 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004499543.1	KEGG: spe:Spro_1154 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004499544.1	KEGG: spe:Spro_1155 thioredoxin domain-containing protein; manually curated; PFAM: Thioredoxin domain
YP_004499545.1	KEGG: spe:Spro_1156 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499546.1	KEGG: spe:Spro_1157 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: Lipase, GDSL
YP_004499547.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1158 putative ABC transporter ATP-binding protein YbbA; SMART: ATPase, AAA+ type, core
YP_004499548.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: spe:Spro_1159 hypothetical protein
YP_004499549.1	KEGG: spe:Spro_1160 sugar transporter; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter
YP_004499550.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: spe:Spro_1162 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004499551.1	TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: spe:Spro_1163 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004499552.1	TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; HAMAP: UDP-2,3-diacylglucosamine hydrolase; KEGG: spe:Spro_1164 UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallophosphoesterase
YP_004499553.1	KEGG: spe:Spro_1165 peptidyl-prolyl cis-trans isomerase B; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004499554.1	TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: spe:Spro_1166 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR
YP_004499555.1	KEGG: spe:Spro_1167 hypothetical protein
YP_004499556.1	HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: spe:Spro_1168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004499558.1	KEGG: spe:Spro_1169 hypothetical protein
YP_004499559.1	KEGG: rsa:RSal33209_3415 esterase
YP_004499560.1	PFAM: Amidohydrolase 2; KEGG: bur:Bcep18194_B2954 amidohydrolase 2
YP_004499561.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rpa:RPA2189 TetR family transcriptional regulator
YP_004499563.1	PFAM: Fimbrial protein, C-terminal; KEGG: ecc:c1239 F1C major fimbrial subunit precursor
YP_004499564.1	PFAM: Fimbrial protein, C-terminal; KEGG: eci:UTI89_C1110 S fimbriae minor subunit SfaD
YP_004499565.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: ecc:c1241 F1C periplasmic chaperone
YP_004499566.1	KEGG: ecp:ECP_0296 fimbrial usher protein; region: usher; pfam00577; manually curated; PFAM: Fimbrial biogenesis outer membrane usher protein
YP_004499567.1	PFAM: Fimbrial protein, C-terminal; KEGG: eci:UTI89_C1113 S fimbriae minor subunit SfaG
YP_004499568.1	PFAM: Fimbrial protein, C-terminal; KEGG: ecc:c1244 F1C minor fimbrial subunit protein G presursor
YP_004499569.1	PFAM: FimH, mannose-binding; Fimbrial protein, C-terminal; KEGG: ecc:c1245 F1C putative fimbrial adhesin precursor
YP_004499570.1	PFAM: PP-loop; KEGG: sty:STY4583 hypothetical protein
YP_004499571.1	KEGG: eci:UTI89_C2237 hypothetical protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease
YP_004499572.1	manually curated; KEGG: etw:ECSP_6077 hypothetical protein
YP_004499573.1	KEGG: ecq:ECED1_5018 L-lactate permease; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004499574.1	PFAM: Cysteine-rich region, CCG; KEGG: ecq:ECED1_5017 conserved hypothetical protein, putative dehydrogenase subunit
YP_004499575.1	KEGG: ecq:ECED1_5016 putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Protein of unknown function DUF162
YP_004499576.1	PFAM: Protein of unknown function DUF162; KEGG: ecq:ECED1_5015 hypothetical protein
YP_004499578.1	KEGG: bac:BamMC406_2395 hypothetical protein
YP_004499579.1	PFAM: Major facilitator superfamily MFS-1; KEGG: agr:AGROH133_05970 MFS transporter
YP_004499580.1	KEGG: hse:Hsero_4628 hypothetical protein
YP_004499581.1	KEGG: dac:Daci_2057 fis family two component sigma-54-specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004499582.1	KEGG: dac:Daci_2058 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004499583.1	KEGG: enc:ECL_00606 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain
YP_004499584.1	KEGG: enc:ECL_00608 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004499585.1	KEGG: caa:Caka_0866 hypothetical protein
YP_004499586.1	KEGG: abc:ACICU_01539 hypothetical protein
YP_004499587.1	KEGG: rso:RS05860 peptide synthetase protein; PFAM: Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Aminotransferase class-III; Condensation domain
YP_004499588.1	PFAM: Arylesterase; KEGG: lby:Lbys_0674 arylesterase
YP_004499589.1	KEGG: lbf:LBF_2715 flavodoxin reductase; PFAM: Ferredoxin; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004499590.1	PFAM: Fatty acid desaturase, type 1; KEGG: pna:Pnap_4185 oxidoreductase FAD/NAD(P)-binding subunit
YP_004499591.1	KEGG: hna:Hneap_0961 alpha/beta superfamily hydrolase/acyltransferase
YP_004499592.1	KEGG: rah:Rahaq_3477 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004499593.1	KEGG: sew:SeSA_A1756 hypothetical protein
YP_004499594.1	KEGG: rah:Rahaq_2633 hypothetical protein
YP_004499595.1	KEGG: spe:Spro_1178 aldo/keto reductase; PFAM: Aldo/keto reductase
YP_004499596.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1179 LysR family transcriptional regulator
YP_004499597.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: spe:Spro_1180 flavodoxin/nitric oxide synthase
YP_004499598.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spe:Spro_1181 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004499600.1	PFAM: Cold-shock protein, DNA-binding; KEGG: spe:Spro_1182 cold-shock DNA-binding domain-containing protein
YP_004499601.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_1183 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004499602.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1184 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499603.1	KEGG: spe:Spro_1185 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499604.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1186 GCN5-related N-acetyltransferase
YP_004499606.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: spe:Spro_1187 hypothetical protein
YP_004499607.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: spe:Spro_1188 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004499608.1	KEGG: ypb:YPTS_1144 cold shock protein CspE; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004499609.1	KEGG: spe:Spro_1190 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004499610.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1191 TetR family transcriptional regulator
YP_004499612.1	TIGRFAM: Camphor resistance CrcB protein; HAMAP: CrcB-like protein; KEGG: spe:Spro_1192 CrcB protein; PFAM: Camphor resistance CrcB protein
YP_004499613.1	PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01926 hypothetical protein
YP_004499614.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; MASE2; KEGG: spe:Spro_1193 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004499615.1	TIGRFAM: Twin-arginine translocation protein TatA/E; HAMAP: Twin-arginine translocation protein TatA/E; KEGG: spe:Spro_1194 twin arginine translocase protein A; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106
YP_004499616.1	KEGG: spe:Spro_1195 lipoyl synthase; PFAM: Radical SAM; TIGRFAM: Lipoate synthase; HAMAP: Lipoate synthase; SMART: Elongator protein 3/MiaB/NifB
YP_004499617.1	PFAM: Biotin/lipoate A/B protein ligase; TIGRFAM: Octanoyltransferase; HAMAP: Octanoyltransferase; KEGG: spe:Spro_1196 lipoate-protein ligase B
YP_004499618.1	KEGG: spe:Spro_1197 hypothetical protein; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493
YP_004499619.1	KEGG: spe:Spro_1198 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004499620.1	KEGG: spe:Spro_1199 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria
YP_004499621.1	KEGG: spe:Spro_1200 cell wall shape-determining protein; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein
YP_004499622.1	TIGRFAM: Penicillin-binding protein 2; KEGG: spe:Spro_1201 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004499623.1	TIGRFAM: Conserved hypothetical protein CHP00246; HAMAP: Ribosomal RNA large subunit methyltransferase H; KEGG: spe:Spro_1202 hypothetical protein; PFAM: SPOUT methyltransferase, predicted
YP_004499624.1	KEGG: spe:Spro_1203 hypothetical protein; TIGRFAM: Iojap-related protein; PFAM: Iojap-related protein
YP_004499625.1	PFAM: Cytidylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; HAMAP: nicotinate-nucleotide adenylyltransferase; KEGG: spe:Spro_1204 nicotinic acid mononucleotide adenylyltransferase
YP_004499626.1	TIGRFAM: DNA polymerase III, delta subunit; KEGG: spe:Spro_1205 DNA polymerase III subunit delta; PFAM: DNA polymerase III, delta
YP_004499627.1	KEGG: spe:Spro_1206 LPS-assembly lipoprotein RlpB; HAMAP: LPS-assembly lipoprotein lptE; PFAM: Rare lipoprotein B
YP_004499628.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: spe:Spro_1207 leucyl-tRNA synthetase
YP_004499629.1	PFAM: Protein of unknown function DUF1451; KEGG: spe:Spro_1208 hypothetical protein
YP_004499630.1	KEGG: spe:Spro_1209 NAD(P)H dehydrogenase (quinone); HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold
YP_004499631.1	KEGG: spe:Spro_1210 ribonucleoside hydrolase 1; PFAM: Inosine/uridine-preferring nucleoside hydrolase
YP_004499632.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1211 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499633.1	KEGG: spe:Spro_1212 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499634.1	KEGG: spe:Spro_1213 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499635.1	KEGG: spe:Spro_1214 glutamate and aspartate transporter subunit; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004499636.1	TIGRFAM: Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; KEGG: spe:Spro_1215 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004499637.1	PFAM: Transporter-associated region; Cystathionine beta-synthase, core; KEGG: spe:Spro_1216 transporter-associated region
YP_004499638.1	TIGRFAM: Uncharacterised protein family UPF0054; HAMAP: Uncharacterised protein family UPF0054; KEGG: spe:Spro_1217 hypothetical protein; PFAM: Uncharacterised protein family UPF0054
YP_004499639.1	PFAM: PhoH-like protein; KEGG: spe:Spro_1218 PhoH family protein
YP_004499640.1	KEGG: spe:Spro_1219 hypothetical protein; TIGRFAM: PhnA protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal
YP_004499641.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; KEGG: spe:Spro_1220 tRNA-i(6)A37 thiotransferase enzyme MiaB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM
YP_004499642.1	KEGG: spe:Spro_1221 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004499643.1	TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: spe:Spro_1222 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II
YP_004499644.1	KEGG: spe:Spro_1223 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; Fibronectin, type III; Carbohydrate-binding domain, family 5/12; SMART: Carbohydrate-binding domain, family 5/12; Fibronectin, type III; Chitinase II
YP_004499645.1	KEGG: spe:Spro_1224 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_004499646.1	KEGG: spe:Spro_1225 ROK family protein; PFAM: ROK; HTH transcriptional regulator, MarR
YP_004499647.1	TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: spe:Spro_1226 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1
YP_004499648.1	PFAM: Glucosamine/galactosamine-6-phosphate isomerase; TIGRFAM: Glucosamine-6-phosphate isomerase, subgroup; HAMAP: Glucosamine-6-phosphate deaminase; KEGG: spe:Spro_1227 glucosamine-6-phosphate deaminase
YP_004499649.1	TIGRFAM: Phosphotransferase system, N-acetylglucosamine-specific IIBC component; Phosphotransferase system, glucose-like IIB component; Phosphotransferase system, sugar-specific permease EIIA 1 domain; KEGG: rah:Rahaq_3183 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004499650.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; HAMAP: Glutaminyl-tRNA synthetase; KEGG: spe:Spro_1229 glutaminyl-tRNA synthetase
YP_004499651.1	PFAM: Outer membrane porin, bacterial; KEGG: spe:Spro_1230 outer membrane porin
YP_004499652.1	KEGG: spe:Spro_1231 putative lipoprotein
YP_004499653.1	KEGG: spe:Spro_1232 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Carbohydrate-binding, chitobiase/hexosaminidase-type, N-terminal; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, C-terminal
YP_004499654.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1233 major facilitator transporter
YP_004499655.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: spe:Spro_1234 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004499656.1	PFAM: Glycosyltransferase sugar-binding region containing DXD motif; KEGG: spe:Spro_1235 hypothetical protein
YP_004499657.1	PFAM: Ferric-uptake regulator; KEGG: spe:Spro_1236 ferric uptake regulator
YP_004499658.1	KEGG: spe:Spro_1237 flavodoxin; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase
YP_004499659.1	PFAM: CopG-like DNA-binding; KEGG: spe:Spro_1238 LexA regulated protein
YP_004499660.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_1239 alpha/beta hydrolase fold domain-containing protein
YP_004499662.1	PFAM: Regulation modulator SeqA; KEGG: spe:Spro_1240 replication initiation regulator SeqA
YP_004499663.1	KEGG: spe:Spro_1241 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004499664.1	PFAM: Transcriptional regulator PadR N-terminal-like; KEGG: spe:Spro_1242 PadR-like family transcriptional regulator
YP_004499665.1	KEGG: spe:Spro_1243 hypothetical protein
YP_004499666.1	KEGG: spe:Spro_1244 DNA-binding transcriptional activator KdpE; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004499667.1	KEGG: spe:Spro_1245 sensor protein KdpD; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004499668.1	PFAM: Potassium transporting ATPase, C subunit; TIGRFAM: Potassium transporting ATPase, C subunit; HAMAP: Potassium transporting ATPase, C subunit; KEGG: spe:Spro_1246 potassium-transporting ATPase subunit C
YP_004499669.1	PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: spe:Spro_1247 potassium-transporting ATPase subunit B
YP_004499670.1	PFAM: ATPase, K+ transporting, A subunit; TIGRFAM: ATPase, K+ transporting, A subunit; HAMAP: ATPase, K+ transporting, A subunit; KEGG: spe:Spro_1248 potassium-transporting ATPase subunit A
YP_004499671.1	PFAM: Protein of unknown function DUF2517; KEGG: spe:Spro_1250 hypothetical protein
YP_004499672.1	PFAM: Protein of unknown function DUF1722; Protein of unknown function DUF523; KEGG: spe:Spro_1251 hypothetical protein
YP_004499673.1	KEGG: spe:Spro_1252 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal
YP_004499674.1	KEGG: spe:Spro_1253 cyclic-AMP phosphodiesterase; PFAM: Cyclic-AMP phosphodiesterase, class-II
YP_004499675.1	KEGG: spe:Spro_1254 putative hydrolase-oxidase; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_004499676.1	TIGRFAM: Conserved hypothetical protein CHP00370; PFAM: Allophanate hydrolase subunit 1; KEGG: spe:Spro_1255 allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1
YP_004499677.1	SMART: Allophanate hydrolase subunit 2; TIGRFAM: Allophanate hydrolase subunit 2; KEGG: spe:Spro_1256 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2
YP_004499678.1	KEGG: spe:Spro_1257 LamB/YcsF family protein; HAMAP: UPF0271 protein ybgL; PFAM: LamB/YcsF
YP_004499679.1	PFAM: Peptidase C15, pyroglutamyl peptidase I; TIGRFAM: Peptidase C15, pyroglutamyl peptidase I; HAMAP: Pyrrolidone-carboxylate peptidase; KEGG: spe:Spro_1260 pyrrolidone-carboxylate peptidase
YP_004499680.1	KEGG: spe:Spro_1261 endonuclease VIII; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_004499681.1	KEGG: spe:Spro_1262 type II citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like
YP_004499682.1	manually curated; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; KEGG: spe:Spro_1263 succinate dehydrogenase cytochrome b556 large membrane subunit; PFAM: Succinate dehydrogenase, cytochrome b subunit
YP_004499683.1	TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; KEGG: spe:Spro_1264 succinate dehydrogenase cytochrome b556 small membrane subunit
YP_004499684.1	TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Succinate dehydrogenase, flavoprotein subunit; KEGG: spe:Spro_1265 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004499685.1	KEGG: spe:Spro_1266 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_004499686.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: spe:Spro_1267 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component
YP_004499687.1	TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: spe:Spro_1268 dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004499688.1	PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; TIGRFAM: Succinyl-CoA synthetase, beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; KEGG: spe:Spro_1269 succinyl-CoA synthetase subunit beta
YP_004499689.1	TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: spe:Spro_1270 succinyl-CoA synthetase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding
YP_004499690.1	KEGG: yen:YE2940 putative 5'-nucleotidase; PFAM: 5'-Nucleotidase, C-terminal; Metallophosphoesterase
YP_004499691.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: spe:Spro_1271 cytochrome bd ubiquinol oxidase subunit I
YP_004499692.1	KEGG: spe:Spro_1272 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004499693.1	KEGG: spe:Spro_1273 cyd operon protein YbgT; TIGRFAM: Cyd operon protein YbgT; PFAM: Membrane bound YbgT-like
YP_004499694.1	KEGG: spe:Spro_1274 hypothetical protein; TIGRFAM: Cyd operon protein YbgE; PFAM: Cyd operon protein YbgE
YP_004499695.1	KEGG: spe:Spro_1275 acyl-CoA thioester hydrolase YbgC; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004499696.1	KEGG: spe:Spro_1276 colicin uptake protein TolQ; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_004499697.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: spe:Spro_1277 colicin uptake protein TolR
YP_004499698.1	KEGG: spe:Spro_1278 cell envelope integrity inner membrane protein TolA; TIGRFAM: Tol-Pal system, TolA; PFAM: Tol-Pal system, TolA
YP_004499699.1	TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; HAMAP: Tol-Pal system beta propeller repeat-containing protein, TolB; KEGG: spe:Spro_1279 translocation protein TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller
YP_004499700.1	KEGG: spe:Spro_1280 peptidoglycan-associated outer membrane lipoprotein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_004499701.1	TIGRFAM: Tol-Pal system, YbgF; KEGG: spe:Spro_1281 tol-pal system protein YbgF
YP_004499702.1	PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: spe:Spro_1282 quinolinate synthetase
YP_004499703.1	KEGG: spe:Spro_1283 nicotinamide mononucleotide transporter PnuC; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC
YP_004499704.1	KEGG: spe:Spro_1284 zinc transporter ZitB; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004499705.1	KEGG: spe:Spro_1285 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Extracellular solute-binding protein, family 3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Extracellular solute-binding protein, family 3; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_004499706.1	KEGG: spe:Spro_1286 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004499707.1	TIGRFAM: DHAP synthase, class 1; KEGG: spe:Spro_1287 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004499708.1	PFAM: Phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; KEGG: spe:Spro_1288 phosphoglyceromutase
YP_004499709.1	PFAM: PsiF; KEGG: spe:Spro_1289 PsiF repeat-containing protein
YP_004499710.1	TIGRFAM: Galactose mutarotase; KEGG: spe:Spro_1290 galactose mutarotase; PFAM: Aldose 1-epimerase
YP_004499711.1	PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: Galactokinase; HAMAP: Galactokinase; KEGG: spe:Spro_1291 galactokinase
YP_004499712.1	TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; KEGG: spe:Spro_1292 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal
YP_004499713.1	PFAM: Abortive infection protein; KEGG: spe:Spro_1293 abortive infection protein
YP_004499714.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_1294 isochorismatase hydrolase
YP_004499715.1	KEGG: spe:Spro_1295 putative molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004499716.1	KEGG: spe:Spro_1296 DNA-binding transcriptional regulator ModE; TIGRFAM: Molybdenum-binding protein, N-terminal; Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR
YP_004499717.1	PFAM: Protein of unknown function DUF2592; KEGG: spe:Spro_1302 hypothetical protein
YP_004499718.1	KEGG: spe:Spro_1303 molybdate transporter periplasmic protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004499719.1	KEGG: spe:Spro_1304 molybdate ABC transporter permease; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499720.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; Molybdenum-pterin binding; KEGG: spe:Spro_1305 molybdate transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1
YP_004499721.1	KEGG: spe:Spro_1306 phosphotransferase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3
YP_004499722.1	HAMAP: 6-phosphogluconolactonase; KEGG: spe:Spro_1307 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394
YP_004499723.1	KEGG: spe:Spro_1308 putative kinase inhibitor protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP
YP_004499724.1	PFAM: Protein of unknown function DUF1232; KEGG: spe:Spro_1309 hypothetical protein
YP_004499725.1	TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: spe:Spro_1310 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: Aminotransferase class-III
YP_004499726.1	KEGG: spe:Spro_1311 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; TIGRFAM: Biotin synthase; HAMAP: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB
YP_004499727.1	PFAM: Aminotransferase, class I/II; TIGRFAM: 8-amino-7-oxononanoate synthase; HAMAP: 8-amino-7-oxononanoate synthase; KEGG: spe:Spro_1312 8-amino-7-oxononanoate synthase
YP_004499728.1	KEGG: spe:Spro_1313 biotin biosynthesis protein BioC; TIGRFAM: Biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11
YP_004499729.1	TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: spe:Spro_1314 dithiobiotin synthetase; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004499730.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1316 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499731.1	SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; TIGRFAM: Excinuclease ABC, B subunit; KEGG: spe:Spro_1317 excinuclease ABC subunit B; HAMAP: Excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein
YP_004499732.1	PFAM: Protein of unknown function DUF2132; KEGG: spe:Spro_1318 hypothetical protein
YP_004499733.1	KEGG: spe:Spro_1319 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052
YP_004499734.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: spe:Spro_1320 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004499735.1	KEGG: spe:Spro_1321 molybdenum cofactor biosynthesis protein B; TIGRFAM: Molybdenum cofactor biosynthesis protein B, proteobacteria; Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_004499736.1	KEGG: spe:Spro_1322 molybdenum cofactor biosynthesis protein MoaC; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; PFAM: Molybdopterin cofactor biosynthesis MoaC region
YP_004499737.1	KEGG: spe:Spro_1323 molybdopterin synthase small subunit; TIGRFAM: Molybdopterin converting factor, subunit 1; PFAM: ThiamineS
YP_004499738.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: spe:Spro_1324 molybdopterin guanine dinucleotide biosynthesis protein MoaE
YP_004499739.1	PFAM: Uncharacterised protein family UPF0005; KEGG: spe:Spro_1325 hypothetical protein
YP_004499740.1	PFAM: ABC-2 type transporter; KEGG: spe:Spro_1326 ABC-2 type transporter
YP_004499741.1	PFAM: ABC-2 type transporter; KEGG: spe:Spro_1327 ABC-2 type transporter
YP_004499742.1	KEGG: spe:Spro_1328 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004499743.1	PFAM: Secretion protein HlyD; KEGG: spe:Spro_1329 hypothetical protein
YP_004499744.1	PFAM: Transcriptional regulator, YbiH, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1330 putative DNA-binding transcriptional regulator
YP_004499745.1	KEGG: spe:Spro_1331 ATP-dependent RNA helicase RhlE; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004499746.1	KEGG: spe:Spro_1336 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004499747.1	PFAM: tRNA-dihydrouridine synthase; KEGG: spe:Spro_1337 tRNA-dihydrouridine synthase C
YP_004499748.1	KEGG: spe:Spro_1338 N-acetyltransferase; PFAM: N-acetyltransferase
YP_004499749.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1339 LysR family transcriptional regulator
YP_004499750.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_1340 hypothetical protein
YP_004499751.1	SMART: Metal-dependent phosphohydrolase, HD region; KEGG: dze:Dd1591_3579 metal dependent phosphohydrolase
YP_004499752.1	KEGG: spe:Spro_2685 hypothetical protein
YP_004499753.1	PFAM: Polysaccharide biosynthesis protein; KEGG: spe:Spro_1343 polysaccharide biosynthesis protein
YP_004499754.1	KEGG: spe:Spro_1344 hypothetical protein
YP_004499755.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1345 LysR family transcriptional regulator
YP_004499756.1	KEGG: spe:Spro_1346 hypothetical protein
YP_004499757.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_1347 amino acid permease-associated protein
YP_004499758.1	PFAM: Transmembrane pair, bacterial; KEGG: spe:Spro_1348 transmembrane pair domain-containing protein
YP_004499759.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1349 LysR family transcriptional regulator
YP_004499760.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ddd:Dda3937_01179 threonine efflux protein
YP_004499761.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_1350 hypothetical protein
YP_004499762.1	PFAM: ThiJ/PfpI; KEGG: pay:PAU_02206 transcriptional regulator, AraC family
YP_004499763.1	KEGG: sur:STAUR_6012 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499764.1	KEGG: spe:Spro_1351 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_004499765.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: spe:Spro_1352 D-alanyl-D-alanine endopeptidase
YP_004499766.1	PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_2409 acetyltransferase
YP_004499767.1	PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: spe:Spro_1353 3-demethylubiquinone-9 3-methyltransferase
YP_004499768.1	PFAM: Protein of unknown function DUF808; KEGG: spe:Spro_1355 hypothetical protein
YP_004499769.1	KEGG: spe:Spro_1356 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004499770.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: acd:AOLE_11150 hypothetical protein
YP_004499771.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: meh:M301_0831 transcriptional regulator, LysR family
YP_004499772.1	SMART: HTH transcriptional regulator, MerR; KEGG: spe:Spro_1357 MerR family transcriptional regulator
YP_004499773.1	KEGG: spe:Spro_1359 YaeC family lipoprotein; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004499774.1	PFAM: Protein of unknown function DUF1460; KEGG: spe:Spro_1360 hypothetical protein
YP_004499775.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1361 GCN5-related N-acetyltransferase
YP_004499776.1	PFAM: Bacterial transferase hexapeptide repeat; KEGG: spe:Spro_1362 hexapaptide repeat-containing transferase
YP_004499777.1	PFAM: Protein of unknown function DUF1282; KEGG: spe:Spro_1363 hypothetical protein
YP_004499778.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: axy:AXYL_03456 hypothetical protein
YP_004499779.1	KEGG: enc:ECL_00740 putative aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004499780.1	KEGG: spe:Spro_1364 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase, membrane binding, C-terminal; FAD linked oxidase, N-terminal
YP_004499781.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: spe:Spro_1365 methionine aminopeptidase; PFAM: Peptidase M24, structural domain
YP_004499782.1	KEGG: spe:Spro_1366 hypothetical protein
YP_004499783.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: spe:Spro_1367 D-alanine--D-alanine ligase
YP_004499785.1	KEGG: spe:Spro_1368 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004499786.1	KEGG: spe:Spro_1369 putative aminotransferase; PFAM: Aminotransferase, class I/II
YP_004499787.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1370 LysR family transcriptional regulator
YP_004499788.1	KEGG: spe:Spro_1371 glycoside hydrolase family 3 protein; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal
YP_004499789.1	KEGG: cti:RALTA_A0253 transcriptional regulator GntR family molecule-binding ubic domain; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004499790.1	KEGG: ypb:YPTS_2252 hypothetical protein
YP_004499791.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_1372 periplasmic binding protein
YP_004499792.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_1373 transport system permease
YP_004499793.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1374 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499794.1	KEGG: spe:Spro_1375 molybdate ABC transporter periplasmic substrate-binding protein
YP_004499795.1	KEGG: spe:Spro_1376 hypothetical protein
YP_004499796.1	KEGG: spe:Spro_1377 cobyrinic acid a,c-diamide synthase
YP_004499797.1	KEGG: spe:Spro_1378 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; Zinc finger, C2H2-like
YP_004499798.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1379 GCN5-related N-acetyltransferase
YP_004499799.1	KEGG: rah:Rahaq_3062 hypothetical protein
YP_004499800.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1380 LysR family transcriptional regulator
YP_004499801.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1381 major facilitator transporter
YP_004499802.1	KEGG: spe:Spro_1382 autoinducer-2 (AI-2) kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004499803.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1383 autoinducer-2 (AI-2) modifying protein LsrG
YP_004499804.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_1384 lysine exporter protein LysE/YggA
YP_004499805.1	KEGG: spe:Spro_1385 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499806.1	KEGG: asa:ASA_1279 hypothetical protein
YP_004499807.1	KEGG: spe:Spro_1386 hypothetical protein; PFAM: RIO-like kinase; SMART: RIO kinase
YP_004499808.1	PFAM: Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; KEGG: spe:Spro_1387 cytoplasmic alpha-amylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004499809.1	PFAM: Protein of unknown function DUF799; KEGG: spe:Spro_1388 hypothetical protein
YP_004499810.1	KEGG: spe:Spro_1389 putative lipoprotein
YP_004499811.1	PFAM: Curli production assembly/transport component CsgG; KEGG: spe:Spro_1390 curli production assembly/transport component CsgG
YP_004499812.1	TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: kpe:KPK_2448 putative diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004499813.1	KEGG: yen:YE3292 putative transposase for insertion element IS1669; manually curated; PFAM: Integrase, catalytic core
YP_004499814.1	KEGG: sea:SeAg_B4795 ISPsy11, transposase OrfA
YP_004499815.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_1392 hypothetical protein
YP_004499816.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_1393 hypothetical protein
YP_004499817.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1394 TetR family transcriptional regulator
YP_004499818.1	PFAM: NLPA lipoprotein; KEGG: spe:Spro_1395 NlpA lipoprotein
YP_004499819.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1396 binding-protein-dependent transport systems inner membrane component
YP_004499820.1	PFAM: ABC transporter-like; NIL domain; KEGG: spe:Spro_1397 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499821.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1398 GCN5-related N-acetyltransferase
YP_004499822.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1399 LysR family transcriptional regulator
YP_004499823.1	KEGG: spe:Spro_1400 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004499824.1	PFAM: Protein of unknown function DUF2236; KEGG: spe:Spro_1401 hypothetical protein
YP_004499825.1	KEGG: spe:Spro_1402 hypothetical protein
YP_004499826.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_1403 isochorismatase hydrolase
YP_004499827.1	KEGG: spe:Spro_1404 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004499828.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1405 LysR family transcriptional regulator
YP_004499829.1	KEGG: pct:PC1_4068 hypothetical protein
YP_004499830.1	manually curated; KEGG: pct:PC1_4069 helix-turn-helix type 11 domain protein
YP_004499831.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1407 major facilitator transporter
YP_004499832.1	PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: spe:Spro_1408 GntR family transcriptional regulator
YP_004499833.1	KEGG: spe:Spro_1409 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004499834.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, phosphonate import, PhnC; KEGG: spe:Spro_1410 phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter-like
YP_004499835.1	TIGRFAM: ABC transporter, phosphonate, periplasmic substrate-binding protein; Phosphonate-binding periplasmic protein; KEGG: spe:Spro_1411 phosphonate ABC transporter periplasmic phosphonate-binding protein
YP_004499836.1	KEGG: spe:Spro_1412 phosphonate ABC transporter inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499837.1	KEGG: spe:Spro_1413 phosphonate ABC transporter inner membrane subunit; TIGRFAM: Phosphonate uptake transporter; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499838.1	PFAM: Protein of unknown function DUF1456; KEGG: spe:Spro_1414 hypothetical protein
YP_004499839.1	TIGRFAM: Allophanate hydrolase; KEGG: spe:Spro_1418 allophanate hydrolase; PFAM: Amidase
YP_004499840.1	SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: spe:Spro_1419 UreA carboxylase; PFAM: Allophanate hydrolase subunit 2; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; Biotin/lipoyl attachment
YP_004499841.1	KEGG: spe:Spro_1420 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004499842.1	KEGG: spe:Spro_1421 putative substrate-binding periplasmic transport protein; TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; PFAM: Extracellular ligand-binding receptor
YP_004499843.1	KEGG: spe:Spro_1422 inner-membrane translocator; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: Bacterial inner-membrane translocator
YP_004499844.1	KEGG: spe:Spro_1423 inner-membrane translocator; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: Bacterial inner-membrane translocator
YP_004499845.1	TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: spe:Spro_1424 ABC transporter-like protein; PFAM: ABC transporter-like
YP_004499846.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: spe:Spro_1425 ABC transporter-like protein; PFAM: ABC transporter-like
YP_004499847.1	PFAM: Plasmid stabilisation system; KEGG: enc:ECL_A010 plasmid stabilization system
YP_004499848.1	KEGG: pao:Pat9b_0067 putative addiction module antidote protein; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Putative addiction module antidote protein, CC2985
YP_004499849.1	PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: spe:Spro_1426 hypothetical protein
YP_004499850.1	KEGG: pfl:PFL_5231 phosphoesterase family protein; TIGRFAM: Acid phosphatase, AcpA; Twin-arginine translocation pathway, signal sequence; PFAM: Phosphoesterase
YP_004499851.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1428 GCN5-related N-acetyltransferase
YP_004499852.1	PFAM: Monooxygenase, FAD-binding; KEGG: spe:Spro_1429 hypothetical protein
YP_004499853.1	KEGG: spe:Spro_1430 hypothetical protein
YP_004499854.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1431 LysR family transcriptional regulator
YP_004499855.1	PFAM: Rhodanese-like; KEGG: spe:Spro_1432 rhodanese domain-containing protein; SMART: Rhodanese-like
YP_004499856.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_1436 NUDIX hydrolase
YP_004499857.1	PFAM: Protein of unknown function DUF523; KEGG: spe:Spro_1437 hypothetical protein
YP_004499858.1	KEGG: vpe:Varpa_1823 hypothetical protein
YP_004499859.1	SMART: Helix-turn-helix, AraC domain; KEGG: spe:Spro_1439 AraC family transcriptional regulator
YP_004499860.1	PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; KEGG: spe:Spro_1440 transcriptional regulator; SMART: HTH transcriptional regulator, GntR
YP_004499861.1	PFAM: Protein of unknown function DUF1127; KEGG: spe:Spro_1441 hypothetical protein
YP_004499862.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dac:Daci_4710 glutathione S-transferase domain-containing protein
YP_004499863.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: spe:Spro_1442 oxidoreductase domain-containing protein
YP_004499864.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rah:Rahaq_4643 antibiotic biosynthesis monooxygenase
YP_004499865.1	PFAM: Isochorismatase-like; KEGG: rah:Rahaq_0165 isochorismatase hydrolase
YP_004499866.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pao:Pat9b_3284 LysR family transcriptional regulator
YP_004499867.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: dda:Dd703_2114 OsmC family protein
YP_004499868.1	PFAM: Fatty acid desaturase, type 1; KEGG: spe:Spro_1444 fatty acid desaturase
YP_004499869.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: spe:Spro_1445 glycine betaine ABC transporter substrate-binding protein
YP_004499870.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1446 binding-protein-dependent transport systems inner membrane component
YP_004499871.1	PFAM: ABC transporter-like; Cystathionine beta-synthase, core; KEGG: spe:Spro_1447 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004499872.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1448 binding-protein-dependent transport systems inner membrane component
YP_004499873.1	manually curated; KEGG: spe:Spro_1449 hypothetical protein
YP_004499874.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: yen:YE2860 putative short chain dehydrogenase
YP_004499875.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: yen:YE2859 LysR family transcriptional regulator
YP_004499876.1	KEGG: spe:Spro_1450 hypothetical protein
YP_004499877.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_1451 hypothetical protein
YP_004499878.1	KEGG: rah:Rahaq_3041 hypothetical protein
YP_004499879.1	KEGG: spe:Spro_1452 putative transcriptional regulator
YP_004499880.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1453 major facilitator transporter
YP_004499881.1	KEGG: ddd:Dda3937_02117 L-rhamnose operon transcriptional activator RhaR; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499882.1	PFAM: AzlC-like; KEGG: vvm:VVM_02146 AzlC family protein
YP_004499883.1	PFAM: Branched-chain amino acid transport; KEGG: dze:Dd1591_1355 branched-chain amino acid transport
YP_004499884.1	KEGG: spe:Spro_1454 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004499885.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1455 GCN5-related N-acetyltransferase
YP_004499886.1	KEGG: spe:Spro_1456 5'-nucleotidase; TIGRFAM: 5-nucleotidase lipoprotein e(P4); PFAM: Acid phosphatase (Class B)
YP_004499887.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1457 GCN5-related N-acetyltransferase
YP_004499888.1	PFAM: Porin, Gram-negative type; KEGG: spe:Spro_1458 porin
YP_004499889.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: spe:Spro_1459 carboxymuconolactone decarboxylase
YP_004499890.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: spe:Spro_1460 putative tautomerase
YP_004499891.1	SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; Helicase-like, DEXD box c2 type; KEGG: spe:Spro_1461 ATP-dependent DNA helicase DinG
YP_004499892.1	KEGG: spe:Spro_1462 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004499893.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_1463 hypothetical protein
YP_004499894.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pfl:PFL_1390 drug transporter
YP_004499895.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mxa:MXAN_6792 LysR family transcriptional regulator
YP_004499896.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bam:Bamb_5140 lysine exporter protein LysE/YggA
YP_004499897.1	SMART: Helix-turn-helix type 3; KEGG: spe:Spro_1464 helix-turn-helix domain-containing protein
YP_004499898.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1465 major facilitator transporter
YP_004499899.1	PFAM: Negative transcriptional regulator; KEGG: spe:Spro_1466 FMN-binding negative transcriptional regulator
YP_004499900.1	PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: spe:Spro_1467 glycosyl transferase family protein
YP_004499901.1	PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; KEGG: spe:Spro_1468 peptidase M3A and M3B thimet/oligopeptidase F
YP_004499902.1	PFAM: Protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein
YP_004499903.1	PFAM: Flavin reductase-like, FMN-binding; KEGG: spe:Spro_1469 flavoprotein oxygenase
YP_004499904.1	HAMAP: Ribosomal RNA large subunit methyltransferase F; KEGG: spe:Spro_1470 putative SAM-dependent methyltransferase; PFAM: S-adenosyl-L-methionine dependent methyltransferase, predicted
YP_004499905.1	KEGG: spe:Spro_1471 hypothetical protein
YP_004499906.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1477 glutamine ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004499907.1	KEGG: spe:Spro_1478 glutamine ABC transporter permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004499908.1	TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; KEGG: spe:Spro_1479 glutamine ABC transporter periplasmic protein; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor
YP_004499910.1	KEGG: spe:Spro_1480 hypothetical protein
YP_004499911.1	KEGG: spe:Spro_1481 DNA starvation/stationary phase protection protein Dps; HAMAP: DNA protection during starvation protein; PFAM: Ferritin/Dps protein
YP_004499912.1	KEGG: rah:Rahaq_4639 shikimate kinase
YP_004499913.1	KEGG: spe:Spro_1482 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022
YP_004499914.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_1483 threonine and homoserine efflux system
YP_004499915.1	KEGG: spe:Spro_1484 outer membrane protein X; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: Virulence-related outer membrane protein
YP_004499916.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_1485 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004499917.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1486 LysR family transcriptional regulator
YP_004499918.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1487 GCN5-related N-acetyltransferase
YP_004499919.1	KEGG: spe:Spro_1489 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain
YP_004499920.1	PFAM: Oxidoreductase, molybdopterin binding; KEGG: spe:Spro_1495 oxidoreductase molybdopterin binding
YP_004499921.1	KEGG: spe:Spro_1496 HupC/HyaC/HydC family protein
YP_004499922.1	KEGG: spe:Spro_1497 hypothetical protein
YP_004499923.1	KEGG: spe:Spro_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004499924.1	KEGG: spe:Spro_1508 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004499925.1	KEGG: spe:Spro_1509 thiosulfate reductase cytochrome subunit B (membrane anchoring protein)
YP_004499926.1	PFAM: Oxidoreductase, molybdopterin binding; KEGG: spe:Spro_1510 oxidoreductase molybdopterin binding
YP_004499927.1	TIGRFAM: Pentapeptide MXKDX repeat protein; KEGG: spe:Spro_1511 pentapeptide MXKDX repeat-containing protein
YP_004499928.1	KEGG: spe:Spro_1512 choline transport protein BetT; TIGRFAM: BCCT transporter; PFAM: BCCT transporter
YP_004499929.1	TIGRFAM: Transcriptional repressor BetI; HAMAP: HTH-type transcriptional regulator betI; KEGG: spe:Spro_1513 transcriptional regulator BetI; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_004499930.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Betaine aldehyde dehydrogenase; HAMAP: Betaine aldehyde dehydrogenase; KEGG: spe:Spro_1514 betaine aldehyde dehydrogenase
YP_004499931.1	PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; TIGRFAM: Choline dehydrogenase; HAMAP: Choline dehydrogenase; KEGG: spe:Spro_1515 choline dehydrogenase
YP_004499932.1	KEGG: spe:Spro_1516 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C
YP_004499933.1	SMART: Transcription regulator LuxR, C-terminal; KEGG: spe:Spro_1517 LuxR family transcriptional regulator
YP_004499934.1	KEGG: spe:Spro_1518 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004499935.1	PFAM: Fimbrial protein, C-terminal; KEGG: smt:Smal_0561 fimbrial protein
YP_004499936.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: smt:Smal_0562 pili assembly chaperone, N-terminal
YP_004499937.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: sml:Smlt0708 putative outer membrane usher protein mrkc precursor
YP_004499938.1	PFAM: Fimbrial protein, C-terminal; KEGG: xfa:XF0077 fimbrial adhesin precursor
YP_004499939.1	KEGG: spe:Spro_1523 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004499940.1	PFAM: Malate:quinone-oxidoreductase; TIGRFAM: Malate:quinone-oxidoreductase; KEGG: spe:Spro_1524 malate:quinone oxidoreductase; HAMAP: Malate:quinone-oxidoreductase
YP_004499941.1	KEGG: spe:Spro_1525 NmrA family protein
YP_004499942.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1526 TetR family transcriptional regulator
YP_004499943.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1527 GCN5-related N-acetyltransferase
YP_004499944.1	PFAM: Alkaline phosphatase; KEGG: spe:Spro_1528 alkaline phosphatase; SMART: Alkaline phosphatase
YP_004499945.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: spe:Spro_1529 glutathione S-transferase domain-containing protein
YP_004499946.1	KEGG: xbo:XBJ1_2784 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004499947.1	KEGG: cti:RALTA_B2169 cytochrome p450 family protein
YP_004499948.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1530 antibiotic biosynthesis monooxygenase
YP_004499949.1	PFAM: Isochorismatase-like; KEGG: geo:Geob_1291 isochorismatase hydrolase
YP_004499950.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pfl:PFL_4036 LysR family transcriptional regulator
YP_004499951.1	KEGG: spe:Spro_1531 hypothetical protein
YP_004499952.1	KEGG: pen:PSEEN4672 hypothetical protein
YP_004499953.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pao:Pat9b_5809 major facilitator superfamily MFS_1
YP_004499954.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: gvi:gll2860 LysR family transcriptional regulator
YP_004499955.1	KEGG: spe:Spro_1536 hypothetical protein
YP_004499956.1	KEGG: spe:Spro_1545 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004499959.1	KEGG: spe:Spro_1546 molybdopterin biosynthesis protein MoeB; TIGRFAM: Molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB
YP_004499960.1	KEGG: spe:Spro_1547 molybdopterin biosynthesis protein MoeA; TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV
YP_004499961.1	PFAM: Protein of unknown function DUF924, bacterial; KEGG: spe:Spro_1548 hypothetical protein
YP_004499962.1	KEGG: spe:Spro_1549 peptidase T2 asparaginase 2; PFAM: Peptidase T2, asparaginase 2
YP_004499963.1	KEGG: spe:Spro_1550 ABC transporter-like protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core
YP_004499964.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_1551 extracellular solute-binding protein
YP_004499965.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1552 binding-protein-dependent transport systems inner membrane component
YP_004499966.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1553 binding-protein-dependent transport systems inner membrane component
YP_004499967.1	PFAM: Post-segregation antitoxin CcdA; KEGG: spe:Spro_1554 post-segregation antitoxin CcdA
YP_004499968.1	PFAM: CcdB protein; KEGG: spe:Spro_1555 CcdB protein
YP_004499969.1	TIGRFAM: S-formylglutathione hydrolase; KEGG: spe:Spro_1556 S-formylglutathione hydrolase; PFAM: Putative esterase
YP_004499970.1	KEGG: spe:Spro_1557 S-(hydroxymethyl)glutathione dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004499971.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1558 LysR family transcriptional regulator
YP_004499972.1	PFAM: Protein of unknown function DUF1228; KEGG: spe:Spro_1559 hypothetical protein
YP_004499973.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; KEGG: spe:Spro_1560 GTP cyclohydrolase I
YP_004499974.1	PFAM: Protein of unknown function DUF418; Protein of unknown function DUF405; KEGG: spe:Spro_1561 hypothetical protein
YP_004499975.1	KEGG: spe:Spro_1562 DNA-binding transcriptional regulator GalS; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004499976.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_1563 periplasmic binding protein/LacI transcriptional regulator
YP_004499977.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1564 galactose/methyl galaxtoside transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004499978.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_1565 beta-methylgalactoside transporter inner membrane component
YP_004499979.1	PFAM: Protein of unknown function DUF218; KEGG: spe:Spro_1566 hypothetical protein
YP_004499980.1	HAMAP: NAD-dependent malic enzyme; KEGG: spe:Spro_1567 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal
YP_004499981.1	PFAM: Cytidine/deoxycytidylate deaminase, zinc-binding region; CMP/dCMP deaminase, zinc-binding; TIGRFAM: Cytidine deaminase, homodimeric; HAMAP: Cytidine deaminase, bacteria; KEGG: spe:Spro_1568 cytidine deaminase
YP_004499982.1	KEGG: spe:Spro_1569 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00659; PFAM: LrgB-like protein
YP_004499983.1	KEGG: spe:Spro_1570 hypothetical protein; HAMAP: UPF0299 membrane protein yohJ; PFAM: LrgA
YP_004499984.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1571 major facilitator transporter
YP_004499985.1	KEGG: yen:YE2787 putative sugar ABC transporter
YP_004499986.1	PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; HAMAP: Methionyl-tRNA synthetase; KEGG: spe:Spro_1573 methionyl-tRNA synthetase
YP_004499987.1	PFAM: ATPase-like, ParA/MinD; KEGG: spe:Spro_1574 putative ATPase
YP_004499988.1	KEGG: spe:Spro_1575 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004499989.1	PFAM: Phosphoribulokinase/uridine kinase; TIGRFAM: Uridine kinase; HAMAP: Uridine kinase; KEGG: spe:Spro_1576 uridine kinase
YP_004499990.1	TIGRFAM: Deoxycytidine triphosphate deaminase; HAMAP: Deoxycytidine triphosphate deaminase; KEGG: spe:Spro_1577 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain
YP_004499991.1	PFAM: AsmA; KEGG: spe:Spro_1578 putative assembly protein
YP_004499992.1	KEGG: gvi:gll4242 hypothetical protein
YP_004499993.1	KEGG: spe:Spro_1579 C4-dicarboxylate transporter DcuC; TIGRFAM: C4-dicarboxylate anaerobic carrier; PFAM: C4-dicarboxylate anaerobic carrier-like
YP_004499994.1	PFAM: Integral membrane protein TerC; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: spe:Spro_1580 integral membrane protein TerC
YP_004499995.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: spe:Spro_1581 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004499996.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: spe:Spro_1582 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_004499997.1	manually curated; KEGG: pdi:BDI_1846 putative transmembrane protein
YP_004499998.1	KEGG: abn:AB57_0097 hypothetical protein
YP_004499999.1	PFAM: Glycosyl transferase, group 1; KEGG: eca:ECA1434 putative glycosyl transferase
YP_004500000.1	PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: spe:Spro_1583 polysaccharide export protein
YP_004500001.1	manually curated; PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: pct:PC1_1297 protein tyrosine phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004500002.1	TIGRFAM: Exopolysaccharide synthesis protein; KEGG: pwa:Pecwa_3034 tyrosine kinase; PFAM: Lipopolysaccharide biosynthesis
YP_004500003.1	PFAM: Glycosyl transferase, group 1; KEGG: nsa:Nitsa_1418 glycosyl transferase group 1
YP_004500004.1	PFAM: Glycosyl transferase, group 1; KEGG: rah:Rahaq_3590 glycosyl transferase group 1
YP_004500005.1	TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: pwa:Pecwa_3033 undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: Bacterial sugar transferase
YP_004500006.1	KEGG: bxe:Bxe_A3849 hypothetical protein
YP_004500007.1	KEGG: spe:Spro_1595 hypothetical protein
YP_004500008.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, PrtD; KEGG: spe:Spro_1596 type I secretion system ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_004500009.1	KEGG: spe:Spro_1597 HlyD family type I secretion membrane fusion protein; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD
YP_004500010.1	KEGG: spe:Spro_1598 TolC family type I secretion outer membrane protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004500011.1	TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: spe:Spro_1599 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal
YP_004500012.1	KEGG: spe:Spro_1600 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004500013.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: spe:Spro_1601 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004500014.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: ddc:Dd586_1245 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_004500015.1	PFAM: dTDP-4-dehydrorhamnose reductase; manually curated; TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dze:Dd1591_2856 dTDP-4-dehydrorhamnose reductase
YP_004500016.1	PFAM: Glycosyl transferase, family 2; KEGG: kpn:KPN_02487 glycosyltransferase
YP_004500017.1	PFAM: ABC-2 type transporter; KEGG: kpn:KPN_02486 O-antigen export - TMD component
YP_004500018.1	PFAM: ABC transporter-like; KEGG: kpn:KPN_02485 O-antigen export - NBD component; SMART: ATPase, AAA+ type, core
YP_004500019.1	PFAM: Capsule polysaccharide biosynthesis; Glycosyl transferase, family 2; KEGG: kpn:KPN_02484 glycosyltransferase
YP_004500020.1	PFAM: Acyltransferase 3; KEGG: pfo:Pfl01_5194 acyltransferase 3
YP_004500021.1	TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: spe:Spro_1608 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding
YP_004500022.1	TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Histidine biosynthesis bifunctional protein hisIE; KEGG: spe:Spro_1609 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase
YP_004500023.1	TIGRFAM: Histidine biosynthesis, HisF; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; KEGG: spe:Spro_1610 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis
YP_004500024.1	PFAM: Histidine biosynthesis; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; HAMAP: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; KEGG: spe:Spro_1611 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
YP_004500025.1	TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; HAMAP: Imidazole glycerol phosphate synthase, subunit H; KEGG: spe:Spro_1612 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004500026.1	PFAM: Imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase, central region; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; HAMAP: Imidazoleglycerol-phosphate dehydratase; Histidine biosynthesis bifunctional protein hisB; KEGG: spe:Spro_1613 imidazole glycerol-phosphate dehydratase/histidinol phosphatase
YP_004500027.1	PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: spe:Spro_1614 histidinol-phosphate aminotransferase
YP_004500028.1	PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: spe:Spro_1615 histidinol dehydrogenase
YP_004500029.1	PFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; Histidine biosynthesis HisG, C-terminal; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; KEGG: spe:Spro_1616 ATP phosphoribosyltransferase
YP_004500030.1	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: spe:Spro_1617 NAD-dependent epimerase/dehydratase
YP_004500031.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1618 LysR family transcriptional regulator
YP_004500032.1	TIGRFAM: Putative agmatinase; KEGG: spe:Spro_1619 putative agmatinase; PFAM: Ureohydrolase
YP_004500033.1	PFAM: Sodium/solute symporter; KEGG: spe:Spro_1620 Na+/solute symporter
YP_004500034.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: spe:Spro_1621 Mg2 transporter protein CorA family protein
YP_004500035.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1622 GCN5-related N-acetyltransferase
YP_004500036.1	KEGG: eca:ECA2691 hypothetical protein
YP_004500037.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: spe:Spro_1623 glutathione S-transferase domain-containing protein
YP_004500038.1	KEGG: spe:Spro_1624 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Haloacid dehalogenase-like hydrolase
YP_004500040.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: spe:Spro_1625 2OG-Fe(II) oxygenase
YP_004500041.1	PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: spe:Spro_1626 cystathionine gamma-synthase
YP_004500042.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Cystathionine beta-synthase, core; KEGG: spe:Spro_1627 pyridoxal-5'-phosphate-dependent protein subunit beta; SMART: Cystathionine beta-synthase, core
YP_004500043.1	KEGG: spe:Spro_1628 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004500044.1	TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: spe:Spro_1629 L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain
YP_004500045.1	TIGRFAM: Serine transporter; KEGG: spe:Spro_1630 serine transporter
YP_004500046.1	KEGG: spe:Spro_1631 DNA-binding transcriptional repressor DeoR; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004500047.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase; KEGG: spe:Spro_1632 deoxyribose-phosphate aldolase
YP_004500048.1	KEGG: spe:Spro_1633 hypothetical protein
YP_004500049.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: spe:Spro_1634 undecaprenyl pyrophosphate phosphatase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004500050.1	KEGG: spe:Spro_1635 hypothetical protein
YP_004500051.1	KEGG: spe:Spro_1636 purine phosphorylase family 1; TIGRFAM: MTA/SAH nucleosidase; PFAM: Nucleoside phosphorylase
YP_004500052.1	KEGG: spe:Spro_1637 ecotin; HAMAP: Ecotin; PFAM: Proteinase inhibitor I11, ecotin
YP_004500053.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: spe:Spro_1638 pyridoxal-5'-phosphate-dependent protein subunit beta
YP_004500054.1	KEGG: bpr:GBP346_A2242 hypothetical protein
YP_004500055.1	KEGG: bur:Bcep18194_A5039 XRE family transcriptional regulator
YP_004500056.1	PFAM: Calcium-mediated lectin; KEGG: plu:plu4230 hypothetical protein
YP_004500057.1	TIGRFAM: YidE/YbjL duplication; HAMAP: transport protein ybjL; KEGG: spe:Spro_1639 hypothetical protein; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal
YP_004500058.1	KEGG: spe:Spro_1640 hypothetical protein
YP_004500059.1	KEGG: spe:Spro_1641 glutaredoxin 1; TIGRFAM: Glutaredoxin, GrxA; PFAM: Glutaredoxin
YP_004500060.1	PFAM: Protein of unknown function DUF1418; KEGG: spe:Spro_1642 hypothetical protein
YP_004500061.1	TIGRFAM: S6 modification enzyme RimK; HAMAP: Ribosomal protein S6 modification protein; KEGG: spe:Spro_1643 alpha-L-glutamate ligase; PFAM: ATP-grasp fold, RimK-type
YP_004500062.1	PFAM: Sensory transduction regulator, putative, bacterial; KEGG: spe:Spro_1644 hypothetical protein
YP_004500063.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_1645 putrescine ABC transporter periplasmic-binding protein
YP_004500064.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; KEGG: spe:Spro_1646 putrescine transporter ATP-binding subunit; PFAM: ABC transporter-like; Transport-associated OB, type 2
YP_004500065.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1647 putrescine ABC transporter membrane protein
YP_004500066.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1648 putrescine ABC transporter membrane protein
YP_004500067.1	KEGG: spe:Spro_1649 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2593
YP_004500068.1	TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; HAMAP: 23S rRNA (uracil-5-)-methyltransferase rumB; KEGG: spe:Spro_1650 23S rRNA methyluridine methyltransferase; PFAM: (Uracil-5)-methyltransferase
YP_004500069.1	TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; KEGG: spe:Spro_1652 cationic amino acid ABC transporter periplasmic binding protein; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor
YP_004500070.1	KEGG: spe:Spro_1653 arginine transporter permease subunit ArtM; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004500071.1	KEGG: spe:Spro_1654 arginine transporter permease subunit ArtQ; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004500072.1	TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; KEGG: spe:Spro_1655 cationic amino acid ABC transporter periplasmic binding protein; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor
YP_004500073.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1656 arginine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004500074.1	KEGG: spe:Spro_1657 putative lipoprotein
YP_004500075.1	manually curated; PFAM: Transcription regulator, AsnC-type, C-terminal; KEGG: psb:Psyr_1172 regulatory proteins, AsnC/Lrp; SMART: Transcription regulator, AsnC-type
YP_004500076.1	PFAM: Protein of unknown function DUF2000; KEGG: ddd:Dda3937_01319 hypothetical protein
YP_004500077.1	KEGG: spe:Spro_1658 hypothetical protein; HAMAP: UPF0145 protein ybjQ; PFAM: Uncharacterised protein family UPF0145
YP_004500078.1	KEGG: bcm:Bcenmc03_3637 hypothetical protein
YP_004500079.1	KEGG: spe:Spro_1659 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004500080.1	KEGG: spe:Spro_1660 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004500081.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_1661 NAD-dependent epimerase/dehydratase
YP_004500082.1	PFAM: Protein of unknown function DUF1294; KEGG: spe:Spro_1662 hypothetical protein
YP_004500083.1	KEGG: spe:Spro_1663 L-threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004500084.1	KEGG: spe:Spro_1664 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004500085.1	PFAM: Ferredoxin; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; KEGG: spe:Spro_1665 HCP oxidoreductase
YP_004500086.1	TIGRFAM: Hybrid cluster protein; HAMAP: Hybrid cluster protein; KEGG: spe:Spro_1666 hydroxylamine reductase; PFAM: Prismane
YP_004500087.1	PFAM: Protein of unknown function DUF340, prokaryotic membrane; KEGG: spe:Spro_1667 hypothetical protein
YP_004500088.1	KEGG: spe:Spro_1668 hypothetical protein
YP_004500089.1	PFAM: Protein of unknown function DUF535; KEGG: spe:Spro_1669 hypothetical protein
YP_004500090.1	KEGG: spe:Spro_1670 macrolide transporter subunit MacA; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004500091.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: spe:Spro_1671 macrolide transporter ATP-binding/permease; SMART: ATPase, AAA+ type, core
YP_004500092.1	TIGRFAM: CspD, cold shock; PFAM: Cold-shock protein, DNA-binding; KEGG: spe:Spro_1672 cold-shock DNA-binding domain-containing protein; SMART: Cold shock protein
YP_004500093.1	PFAM: Adaptor protein ClpS, core; KEGG: spe:Spro_1673 ATP-dependent Clp protease adaptor protein ClpS
YP_004500094.1	TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: spe:Spro_1674 ATP-dependent Clp protease ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004500095.1	TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: rah:Rahaq_1444 translation initiation factor IF-1; PFAM: S1, IF1 type
YP_004500096.1	PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: spe:Spro_1676 leucyl/phenylalanyl-tRNA--protein transferase
YP_004500097.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; KEGG: spe:Spro_1677 cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter-like
YP_004500098.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; KEGG: spe:Spro_1678 cysteine/glutathione ABC transporter membrane/ATP-binding component; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_004500099.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spe:Spro_1679 glutathione S-transferase domain-containing protein
YP_004500100.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1680 LysR family transcriptional regulator
YP_004500101.1	TIGRFAM: Thioredoxin reductase; KEGG: spe:Spro_1681 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004500102.1	KEGG: spe:Spro_1682 leucine-responsive transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004500103.1	PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: spe:Spro_1683 cell division protein FtsK/SpoIIIE
YP_004500104.1	TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; HAMAP: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; KEGG: spe:Spro_1684 outer-membrane lipoprotein carrier protein; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_004500105.1	KEGG: spe:Spro_1685 recombination factor protein RarA; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004500106.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; TIGRFAM: Seryl-tRNA synthetase, class IIa; HAMAP: Seryl-tRNA synthetase; KEGG: spe:Spro_1686 seryl-tRNA synthetase
YP_004500107.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dda:Dd703_0041 lysine exporter (LysE/YggA)
YP_004500108.1	KEGG: dda:Dd703_0040 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500109.1	PFAM: Protein of unknown function DUF1801; KEGG: sbn:Sbal195_1946 hypothetical protein
YP_004500110.1	KEGG: spe:Spro_1700 putative MFS family transporter protein; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004500111.1	TIGRFAM: Pyruvate formate-lyase activating; KEGG: spe:Spro_1701 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM
YP_004500112.1	TIGRFAM: Formate acetyltransferase; KEGG: spe:Spro_1702 formate acetyltransferase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical
YP_004500113.1	KEGG: spe:Spro_1703 formate transporter; TIGRFAM: Formate/nitrite transporter; PFAM: Formate/nitrite transporter
YP_004500114.1	KEGG: spe:Spro_1704 hypothetical protein; TIGRFAM: YcaO-like; PFAM: YcaO-like
YP_004500115.1	TIGRFAM: L-asparaginase, type II; KEGG: spe:Spro_1705 L-asparaginase II; PFAM: Asparaginase/glutaminase
YP_004500116.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; KEGG: spe:Spro_1706 phosphoserine aminotransferase
YP_004500117.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; KEGG: spe:Spro_1707 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004500118.1	PFAM: Cytidylate kinase region; TIGRFAM: Cytidylate kinase; HAMAP: Cytidylate kinase; KEGG: spe:Spro_1708 cytidylate kinase
YP_004500119.1	KEGG: spe:Spro_1709 30S ribosomal protein S1; TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA binding domain
YP_004500120.1	TIGRFAM: Integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: spe:Spro_1710 integration host factor subunit beta; SMART: Histone-like bacterial DNA-binding protein
YP_004500121.1	manually curated; TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; KEGG: spe:Spro_1711 hypothetical protein; PFAM: ComEC/Rec2-related protein
YP_004500122.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: spe:Spro_1712 lipid transporter ATP-binding/permease; PFAM: ABC transporter-like; ABC transporter, transmembrane region
YP_004500123.1	PFAM: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; KEGG: spe:Spro_1713 tetraacyldisaccharide 4'-kinase
YP_004500124.1	PFAM: Protein of unknown function DUF1338; KEGG: spe:Spro_1714 hypothetical protein
YP_004500125.1	KEGG: spe:Spro_1715 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004500126.1	KEGG: spe:Spro_1716 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004500127.1	PFAM: Protein of unknown function DUF1006; KEGG: spe:Spro_1717 hypothetical protein
YP_004500128.1	KEGG: spe:Spro_1718 hypothetical protein; HAMAP: UPF0434 protein ycaR; PFAM: Protein of unknown function DUF343
YP_004500129.1	PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: spe:Spro_1719 3-deoxy-manno-octulosonate cytidylyltransferase
YP_004500130.1	KEGG: spe:Spro_1720 hypothetical protein
YP_004500131.1	PFAM: Protein of unknown function DUF218; KEGG: spe:Spro_1721 hypothetical protein
YP_004500132.1	PFAM: Methyltransferase type 11; KEGG: spe:Spro_1722 putative metallothionein SmtA
YP_004500133.1	KEGG: spe:Spro_1723 condesin subunit F; HAMAP: Chromosome partition protein MukF; PFAM: Chromosome partition protein MukF
YP_004500134.1	KEGG: spe:Spro_1724 condesin subunit E; HAMAP: Prokaryotic chromosome segregation/condensation protein MukE; PFAM: Prokaryotic chromosome segregation/condensation protein MukE
YP_004500135.1	KEGG: spe:Spro_1725 cell division protein MukB; HAMAP: Chromosome partition protein MukB; PFAM: Prokaryotic chromosome segregation/condensation protein MukB, N-terminal
YP_004500136.1	PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: spe:Spro_1726 hypothetical protein
YP_004500137.1	KEGG: spe:Spro_1727 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF882, bacterial
YP_004500138.1	KEGG: spe:Spro_1728 beta-lactamase domain-containing protein
YP_004500139.1	KEGG: spe:Spro_1729 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_004500140.1	PFAM: Porin, Gram-negative type; KEGG: spe:Spro_1730 porin
YP_004500141.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; HAMAP: Asparaginyl-tRNA synthetase; KEGG: spe:Spro_1731 asparaginyl-tRNA synthetase
YP_004500142.1	TIGRFAM: Nicotinate phosphoribosyltransferase; HAMAP: Nicotinate phosphoribosyltransferase; KEGG: spe:Spro_1732 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like
YP_004500143.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spe:Spro_1733 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004500145.1	KEGG: spe:Spro_1734 aminopeptidase N; TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal
YP_004500146.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1735 aliphatic sulfonates transport ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004500147.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_1736 binding-protein-dependent transport systems inner membrane component
YP_004500148.1	PFAM: Luciferase-like, subgroup; TIGRFAM: Alkanesulphonate monooxygenase, FMN-dependent; HAMAP: Alkanesulfonate monooxygenase; KEGG: spe:Spro_1737 alkanesulfonate monooxygenase
YP_004500149.1	KEGG: spe:Spro_1738 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: Extracellular solute-binding protein, family 3
YP_004500150.1	TIGRFAM: NADPH-dependent ,FMN reductase, SsuE; KEGG: spe:Spro_1739 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase
YP_004500151.1	PFAM: Dihydroorotate dehydrogenase, class 1/ 2; TIGRFAM: Dihydroorotate dehydrogenase, class 2; HAMAP: Dihydroorotate dehydrogenase; KEGG: spe:Spro_1740 dihydroorotate dehydrogenase 2
YP_004500152.1	PFAM: Protein of unknown function DUF1379; KEGG: spe:Spro_1741 hypothetical protein
YP_004500153.1	PFAM: Molybdenum cofactor sulfurase, C-terminal; MOSC, N-terminal beta barrel; Ferredoxin; KEGG: spe:Spro_1742 MOSC domain-containing protein
YP_004500154.1	HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria,; KEGG: spe:Spro_1743 23S rRNA m(2)G2445 methyltransferase; PFAM: Putative RNA methylase; THUMP; Protein of unknown function methylase putative
YP_004500155.1	KEGG: spe:Spro_1744 ABC transporter ATPase; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004500156.1	KEGG: spe:Spro_1745 PqiA family integral membrane protein; TIGRFAM: Conserved hypothetical protein CHP00155; PFAM: Paraquat-inducible protein A
YP_004500157.1	PFAM: Mammalian cell entry related; KEGG: spe:Spro_1746 paraquat-inducible protein B
YP_004500158.1	PFAM: Protein of unknown function DUF330; KEGG: spe:Spro_1747 hypothetical protein
YP_004500159.1	PFAM: Ribosome modulation factor; KEGG: spe:Spro_1748 ribosome modulation factor
YP_004500160.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: spe:Spro_1749 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004500161.1	PFAM: Helix-turn-helix, HxlR type; KEGG: spe:Spro_1750 HxlR family transcriptional regulator
YP_004500162.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; HAMAP: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; KEGG: spe:Spro_1751 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
YP_004500163.1	manually curated; KEGG: spe:Spro_1752 putative Lon protease
YP_004500164.1	KEGG: spe:Spro_1753 hypothetical protein; HAMAP: UPF0268 protein ycbG; PFAM: Protein of unknown function DUF1047
YP_004500165.1	KEGG: spe:Spro_1754 outer membrane protein A
YP_004500166.1	TIGRFAM: Cell division inhibitor SulA; HAMAP: Cell division inhibitor SulA; KEGG: spe:Spro_1755 SOS cell division inhibitor; PFAM: Cell division inhibitor SulA
YP_004500167.1	PFAM: TfoX, N-terminal; TfoX, C-terminal; KEGG: spe:Spro_1756 regulator of competence-specific genes
YP_004500168.1	TIGRFAM: Intergral membrane protein, YccS; Integral membrane protein, YccS/YhfK; KEGG: spe:Spro_1757 hypothetical protein
YP_004500169.1	PFAM: Protein of unknown function DUF307; KEGG: spe:Spro_1758 hypothetical protein
YP_004500170.1	PFAM: DNA helicase, UvrD/REP type; KEGG: spe:Spro_1759 DNA helicase IV
YP_004500171.1	PFAM: MGS-like; TIGRFAM: Methylglyoxal synthase; HAMAP: Methylglyoxal synthase; KEGG: spe:Spro_1760 methylglyoxal synthase
YP_004500172.1	KEGG: spe:Spro_1761 hypothetical protein; HAMAP: UPF0319 protein yccT; PFAM: Protein of unknown function DUF2057
YP_004500173.1	PFAM: CoA-binding; KEGG: spe:Spro_1762 CoA-binding domain-containing protein
YP_004500174.1	TIGRFAM: Hemimethylated DNA-binding region; HAMAP: Heat shock protein hspQ; KEGG: spe:Spro_1763 heat shock protein HspQ; PFAM: Hemimethylated DNA-binding region
YP_004500175.1	HAMAP: Ribosomal RNA large subunit methyltransferase I; KEGG: spe:Spro_1764 PUA domain-containing protein; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_004500176.1	KEGG: spe:Spro_1765 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like
YP_004500177.1	KEGG: spe:Spro_1766 DsrC family protein; TIGRFAM: DsrC-like protein; PFAM: DsrC-like protein
YP_004500178.1	PFAM: Uncharacterised protein family UPF0005; KEGG: spe:Spro_1767 hypothetical protein
YP_004500179.1	PFAM: Protein of unknown function DUF1295; KEGG: hch:HCH_06037 hypothetical protein
YP_004500180.1	KEGG: hch:HCH_06036 nitroreductase
YP_004500181.1	KEGG: lpj:JDM1_1415 phosphopantetheinyltransferase
YP_004500182.1	KEGG: hch:HCH_06034 RedY-like protein
YP_004500183.1	KEGG: hch:HCH_06033 polyketide synthase modules-like protein; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004500184.1	KEGG: hch:HCH_06032 non-ribosomal peptide synthetase modules-like protein; PFAM: AMP-dependent synthetase/ligase
YP_004500185.1	KEGG: hch:HCH_06031 7-keto-8-aminopelargonate synthetase-like protein; PFAM: Aminotransferase, class I/II; Phosphopantetheine-binding
YP_004500186.1	KEGG: hch:HCH_06030 acyl carrier protein
YP_004500187.1	PFAM: O-methyltransferase, family 2; KEGG: hch:HCH_06029 SAM-dependent methyltransferase
YP_004500188.1	KEGG: hch:HCH_06028 ornithine/acetylornithine aminotransferase; PFAM: Aminotransferase class-III
YP_004500189.1	KEGG: hch:HCH_06027 hypothetical protein
YP_004500190.1	KEGG: hch:HCH_06026 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region
YP_004500191.1	PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: hch:HCH_06024 hypothetical protein
YP_004500192.1	KEGG: hch:HCH_06021 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central region; Acyl-CoA dehydrogenase, N-terminal
YP_004500193.1	KEGG: spe:Spro_1806 hypothetical protein
YP_004500194.1	PFAM: DNA/RNA non-specific endonuclease; KEGG: spe:Spro_1810 nuclease; SMART: Extracellular Endonuclease, subunit A
YP_004500195.1	KEGG: spe:Spro_1812 hypothetical protein
YP_004500196.1	TIGRFAM: Flavoprotein WrbA; HAMAP: Flavoprotein wrbA; KEGG: spe:Spro_1813 TrpR binding protein WrbA; PFAM: Flavodoxin/nitric oxide synthase
YP_004500197.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_1814 lysine exporter protein LysE/YggA
YP_004500198.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_1815 LysR family transcriptional regulator
YP_004500199.1	KEGG: rah:Rahaq_1574 hypothetical protein
YP_004500200.1	KEGG: spe:Spro_1816 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004500201.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_1817 hypothetical protein
YP_004500202.1	KEGG: spe:Spro_1818 uracil-xanthine permease; TIGRFAM: Pyrimidine permease RutG, predicted; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004500203.1	KEGG: spe:Spro_1819 flavin reductase domain-containing protein; TIGRFAM: Flavin reductase-like, FMN-binding, pyrimidine utilisation protein RutF; PFAM: Flavin reductase-like, FMN-binding
YP_004500204.1	KEGG: spe:Spro_1820 alpha/beta hydrolase fold domain-containing protein; TIGRFAM: Pyrimidine utilisation protein RutD; PFAM: Alpha/beta hydrolase fold-1
YP_004500205.1	KEGG: spe:Spro_1821 endoribonuclease L-PSP; TIGRFAM: Endoribonuclease L-PSP, pyrimidine utilisation protein RutC; PFAM: Endoribonuclease L-PSP
YP_004500206.1	KEGG: spe:Spro_1822 isochorismatase hydrolase; TIGRFAM: Isochorismatase-like, pyrimidine utilization, RutB; PFAM: Isochorismatase-like
YP_004500207.1	KEGG: spe:Spro_1823 luciferase family protein; TIGRFAM: Luciferase-like, pyrimidine utilisation protein RutA; PFAM: Luciferase-like, subgroup
YP_004500208.1	PFAM: Transcriptional regulator, YcdC, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_1824 TetR family transcriptional regulator
YP_004500209.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_1825 D-alanine/D-serine/glycine permease
YP_004500210.1	PFAM: Tol-Pal system, TolA; KEGG: eic:NT01EI_2858 protein TolA, putative
YP_004500211.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_1826 DedA family protein
YP_004500212.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1827 antibiotic biosynthesis monooxygenase
YP_004500213.1	PFAM: Crotonase, core; KEGG: spe:Spro_1828 enoyl-CoA hydratase/isomerase
YP_004500214.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1829 major facilitator transporter
YP_004500215.1	TIGRFAM: Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase; KEGG: spe:Spro_1830 5-aminolevulinate synthase; PFAM: Aminotransferase, class I/II
YP_004500216.1	KEGG: spe:Spro_1831 acetyl-CoA acetyltransferase; TIGRFAM: Thiolase
YP_004500217.1	KEGG: spe:Spro_1832 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004500218.1	KEGG: spe:Spro_1833 LuxR family transcriptional regulator; PFAM: Autoinducer-binding; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004500219.1	PFAM: UspA; KEGG: spe:Spro_1834 UspA domain-containing protein
YP_004500220.1	KEGG: spe:Spro_1835 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase
YP_004500221.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_1836 amino acid permease-associated protein
YP_004500222.1	KEGG: spe:Spro_1837 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004500223.1	PFAM: Dihydrodipicolinate synthetase; KEGG: spe:Spro_1838 dihydrodipicolinate synthetase
YP_004500224.1	KEGG: spe:Spro_1839 AraC family transcriptional regulator; PFAM: PAS fold-4; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500225.1	KEGG: spe:Spro_1840 proline racemase; PFAM: Proline racemase
YP_004500226.1	PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_1841 FAD dependent oxidoreductase
YP_004500227.1	KEGG: spe:Spro_1842 ferredoxin
YP_004500228.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; KEGG: spe:Spro_1843 FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004500229.1	KEGG: spe:Spro_1844 hypothetical protein
YP_004500230.1	PFAM: Extensin-like, C-terminal; KEGG: pct:PC1_1846 extensin family protein
YP_004500231.1	KEGG: spe:Spro_1845 hypothetical protein
YP_004500232.1	KEGG: spe:Spro_1846 hypothetical protein
YP_004500233.1	PFAM: GlpM; KEGG: rah:Rahaq_2566 GlpM family protein
YP_004500234.1	PFAM: Protein of unknown function DUF2594; KEGG: spe:Spro_1847 hypothetical protein
YP_004500235.1	KEGG: spe:Spro_1848 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004500236.1	SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Excinuclease ABC, C subunit; KEGG: spe:Spro_1849 excinuclease ABC subunit C; HAMAP: UvrABC system protein C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; Helix-hairpin-helix motif
YP_004500237.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; HAMAP: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: spe:Spro_1850 phosphatidylglycerophosphate synthetase
YP_004500238.1	KEGG: spe:Spro_1853 hypothetical protein
YP_004500239.1	PFAM: Sulfatase; Protein of unknown function DUF1705; KEGG: spe:Spro_1859 phosphoethanolamine transferase
YP_004500240.1	KEGG: rah:Rahaq_0794 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004500241.1	KEGG: spe:Spro_1860 proline/glycine betaine transporter; TIGRFAM: Citrate-proton symport; PFAM: General substrate transporter; Osmosensory transporter coiled coil
YP_004500242.1	KEGG: spe:Spro_1861 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004500243.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: spe:Spro_1862 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500244.1	KEGG: spe:Spro_1863 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004500245.1	KEGG: ebi:EbC_18640 excinuclease cho; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal
YP_004500246.1	KEGG: spe:Spro_1864 hypothetical protein
YP_004500247.1	PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: spe:Spro_1865 hypothetical protein
YP_004500248.1	KEGG: spe:Spro_1866 hypothetical protein
YP_004500249.1	KEGG: spe:Spro_1867 potassium/proton antiporter; HAMAP: Cell volume regulation protein A; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; Transporter-associated region
YP_004500250.1	KEGG: spe:Spro_1868 hypothetical protein
YP_004500251.1	PFAM: Acyltransferase 3; KEGG: rah:Rahaq_3585 acyltransferase 3
YP_004500252.1	PFAM: Acyltransferase 3; KEGG: spe:Spro_1869 glucans biosynthesis protein
YP_004500253.1	KEGG: spe:Spro_1870 glucan biosynthesis protein G; HAMAP: Glucans biosynthesis protein G; PFAM: Glucan biosynthesis, periplasmic, MdoG C-terminal
YP_004500254.1	KEGG: spe:Spro_1871 glucosyltransferase MdoH; HAMAP: Glucans biosynthesis glucosyltransferase H; PFAM: Glycosyl transferase, family 2
YP_004500255.1	PFAM: Protein of unknown function DUF1375; KEGG: spe:Spro_1872 hypothetical protein
YP_004500256.1	KEGG: spe:Spro_1873 hypothetical protein
YP_004500257.1	KEGG: spe:Spro_1874 hypothetical protein
YP_004500258.1	TIGRFAM: Yeast 2-isopropylmalate synthase; KEGG: spe:Spro_1875 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004500259.1	KEGG: spe:Spro_1876 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500260.1	KEGG: spe:Spro_1877 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004500261.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: spe:Spro_1878 hypothetical protein
YP_004500262.1	PFAM: Protein of unknown function DUF395, YeeE/YedE; KEGG: spe:Spro_1879 hypothetical protein
YP_004500263.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_1880 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004500264.1	KEGG: spe:Spro_1881 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_004500265.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_1882 major facilitator transporter
YP_004500266.1	PFAM: YCII-related; KEGG: spe:Spro_1883 YCII-like protein
YP_004500267.1	KEGG: spe:Spro_1884 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004500269.1	KEGG: rah:Rahaq_2978 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004500270.1	HAMAP: UPF0176 protein yceA; PFAM: Rhodanese-like; KEGG: spe:Spro_1886 hypothetical protein; SMART: Rhodanese-like
YP_004500271.1	KEGG: spe:Spro_1887 YceI family protein; HAMAP: Protein yceI; PFAM: Lipid/polyisoprenoid-binding, YceI-like
YP_004500272.1	KEGG: spe:Spro_1888 cytochrome b561
YP_004500273.1	PFAM: Uncharacterised protein family UPF0118; KEGG: spe:Spro_1889 putative transport protein
YP_004500274.1	KEGG: spe:Spro_1891 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004500275.1	KEGG: spe:Spro_1892 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase
YP_004500276.1	KEGG: spe:Spro_1893 biofilm formation regulatory protein BssS
YP_004500277.1	KEGG: spe:Spro_1894 hypothetical protein
YP_004500278.1	PFAM: DNA damage-inducible protein DinI-like; KEGG: spe:Spro_1895 DNA damage-inducible protein I
YP_004500279.1	PFAM: Amidohydrolase 1; TIGRFAM: Dihydroorotase homodimeric type; HAMAP: Dihydroorotase; KEGG: spe:Spro_1896 dihydroorotase
YP_004500280.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_1897 antibiotic biosynthesis monooxygenase
YP_004500281.1	KEGG: spe:Spro_1898 ribonuclease E; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_004500282.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_1899 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4
YP_004500283.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: spe:Spro_1900 maf protein; PFAM: Maf-like protein
YP_004500284.1	PFAM: Protein of unknown function DUF177; KEGG: spe:Spro_1901 hypothetical protein
YP_004500285.1	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: rah:Rahaq_2959 ribosomal protein L32; PFAM: Ribosomal protein L32p
YP_004500286.1	TIGRFAM: Phospholipid biosynthesis protein, PlsX like; HAMAP: Phospholipid biosynthesis protein, PlsX like; KEGG: spe:Spro_1903 putative glycerol-3-phosphate acyltransferase PlsX; PFAM: Fatty acid synthesis plsX protein
YP_004500287.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: spe:Spro_1904 3-oxoacyl-(acyl carrier protein) synthase III
YP_004500288.1	TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: spe:Spro_1905 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_004500289.1	KEGG: spe:Spro_1906 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500290.1	TIGRFAM: Acyl carrier protein (ACP); HAMAP: Acyl carrier protein (ACP); KEGG: spe:Spro_1907 acyl carrier protein; PFAM: Phosphopantetheine-binding
YP_004500291.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: spe:Spro_1908 3-oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004500292.1	TIGRFAM: Aminodeoxychorismate lyase, class IV; KEGG: spe:Spro_1909 4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase, class IV
YP_004500293.1	KEGG: spe:Spro_1910 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; PFAM: Uncharacterised protein family YceG-like
YP_004500294.1	PFAM: Thymidylate kinase-like; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: spe:Spro_1911 thymidylate kinase
YP_004500295.1	KEGG: spe:Spro_1912 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III, delta subunit, C-terminal
YP_004500296.1	KEGG: spe:Spro_1913 putative metallodependent hydrolase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_004500297.1	TIGRFAM: Phosphotransferase system, glucose-specific IIBC component; Phosphotransferase system, maltose/glucose-specific IIC component; Phosphotransferase system, glucose-like IIB component; KEGG: spe:Spro_1914 PTS system glucose-specific transporter subunits IIBC; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004500298.1	KEGG: spe:Spro_1915 manganese transport regulator MntR; PFAM: Iron dependent repressor; SMART: Iron dependent repressor
YP_004500299.1	TIGRFAM: Natural resistance-associated macrophage protein; HAMAP: Manganese transport protein mntH; KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter; PFAM: Natural resistance-associated macrophage protein
YP_004500300.1	KEGG: kva:Kvar_4261 putative lipoprotein
YP_004500301.1	KEGG: abb:ABBFA_002554 hypothetical protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region
YP_004500302.1	KEGG: spe:Spro_1917 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500303.1	PFAM: Helix-turn-helix, HxlR type; KEGG: spe:Spro_1918 HxlR family transcriptional regulator
YP_004500304.1	KEGG: spe:Spro_1919 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004500305.1	PFAM: Histidine triad (HIT) protein; KEGG: spe:Spro_1920 histidine triad (HIT) protein
YP_004500306.1	PFAM: Protein of unknown function DUF1425; KEGG: spe:Spro_1921 hypothetical protein
YP_004500307.1	TIGRFAM: Uncharacterised conserved lipoprotein, UCP02722; KEGG: spe:Spro_1922 membrane lipoprotein lipid attachment site
YP_004500308.1	KEGG: spe:Spro_1923 thiamine kinase; PFAM: Aminoglycoside phosphotransferase
YP_004500309.1	KEGG: spe:Spro_1924 beta-hexosaminidase; HAMAP: Beta-hexosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal
YP_004500310.1	KEGG: spe:Spro_1925 hypothetical protein; HAMAP: UPF0227 protein ycfP; PFAM: Uncharacterised protein family UPF0227
YP_004500311.1	KEGG: spe:Spro_1926 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004500312.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: spe:Spro_1927 hypothetical protein
YP_004500313.1	PFAM: Transcriptional regulator, Rrf2; KEGG: spe:Spro_1928 BadM/Rrf2 family transcriptional regulator
YP_004500314.1	KEGG: spe:Spro_1929 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004500315.1	KEGG: spe:Spro_1930 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004500316.1	KEGG: spe:Spro_1931 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500317.1	KEGG: spe:Spro_1932 amino acid/peptide transporter; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_004500318.1	HAMAP: Glyoxylate/hydroxypyruvate reductase A; KEGG: spe:Spro_1933 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004500319.1	HAMAP: hydrolase ycdX; PFAM: PHP, C-terminal; KEGG: spe:Spro_1934 putative hydrolase; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004500320.1	KEGG: spe:Spro_1935 cytoplasmic chaperone TorD family protein
YP_004500321.1	PFAM: Protein of unknown function DUF533; KEGG: spe:Spro_1936 hypothetical protein
YP_004500322.1	KEGG: spe:Spro_1937 oligopeptidase B; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain
YP_004500323.1	KEGG: spe:Spro_1938 exodeoxyribonuclease X; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_004500324.1	KEGG: ypb:YPTS_1781 hypothetical protein
YP_004500325.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: spe:Spro_1939 TraR/DksA family transcriptional regulator
YP_004500326.1	KEGG: spe:Spro_1940 proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; PFAM: Alpha/beta hydrolase fold-1
YP_004500327.1	PFAM: DNA polymerase III-theta, bacterial; KEGG: spe:Spro_1941 DNA polymerase III subunit theta
YP_004500328.1	PFAM: Copper resistance protein CopC, core; KEGG: spe:Spro_1943 copper resistance protein CopC
YP_004500329.1	PFAM: Copper resistance D; KEGG: spe:Spro_1944 copper resistance D domain-containing protein
YP_004500330.1	PFAM: Protein of unknown function DUF2511; KEGG: spe:Spro_1945 hypothetical protein
YP_004500331.1	KEGG: aha:AHA_2965 hypothetical protein
YP_004500333.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: ddd:Dda3937_04484 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
YP_004500335.1	PFAM: Isochorismatase-like; KEGG: pfl:PFL_2630 isochorismatase family protein
YP_004500336.1	KEGG: spe:Spro_1948 hypothetical protein
YP_004500337.1	KEGG: spe:Spro_1595 hypothetical protein
YP_004500338.1	KEGG: yen:YE3292 putative transposase for insertion element IS1669; manually curated; PFAM: Integrase, catalytic core
YP_004500339.1	KEGG: sea:SeAg_B4795 ISPsy11, transposase OrfA
YP_004500340.1	HAMAP: Uncharacterised protein family, TER reductase; KEGG: spe:Spro_1949 trans-2-enoyl-CoA reductase; PFAM: Uncharacterised protein family, TER reductase
YP_004500341.1	KEGG: spe:Spro_1950 hypothetical protein
YP_004500342.1	KEGG: spe:Spro_1951 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004500344.1	KEGG: spe:Spro_1952 hypothetical protein
YP_004500346.1	KEGG: spe:Spro_1954 hypothetical protein
YP_004500347.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: axy:AXYL_04229 LysR family regulatory helix-turn-helix protein 141
YP_004500348.1	TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: mci:Mesci_2298 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1
YP_004500349.1	KEGG: spe:Spro_1958 DNA-binding transcriptional activator DcuR; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004500350.1	KEGG: spe:Spro_1959 sensory histidine kinase DcuS; PFAM: ATP-binding region, ATPase-like; PAS fold; SMART: ATP-binding region, ATPase-like
YP_004500351.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_1960 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004500352.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_1961 periplasmic binding protein/LacI transcriptional regulator
YP_004500353.1	PFAM: ABC transporter-like; KEGG: spe:Spro_1962 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500354.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_1963 monosaccharide-transporting ATPase
YP_004500355.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_1964 periplasmic binding protein/LacI transcriptional regulator
YP_004500356.1	KEGG: spe:Spro_1965 hypothetical protein
YP_004500357.1	KEGG: spe:Spro_1966 YaeC family lipoprotein; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004500358.1	KEGG: spe:Spro_1967 hypothetical protein
YP_004500359.1	PFAM: UspA; KEGG: spe:Spro_1969 UspA domain-containing protein
YP_004500360.1	KEGG: plu:plu4352 hypothetical protein; manually curated; PFAM: Carbohydrate/purine kinase; Helix-turn-helix, type 11
YP_004500361.1	KEGG: pay:PAU_03909 hypothetical protein; HAMAP: Pseudouridine-5'-phosphate glycosidase; PFAM: Indigoidine synthase A like protein
YP_004500362.1	KEGG: xbo:XBJ1_2252 putative NUP family transport protein; TIGRFAM: Concentrative nucleoside transporter, metazoan/bacterial; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition
YP_004500363.1	PFAM: Protein of unknown function DUF1097; KEGG: vvy:VVA0739 hypothetical protein
YP_004500364.1	KEGG: spe:Spro_1976 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004500365.1	PFAM: Polyketide cyclase/dehydrase; KEGG: spe:Spro_1977 hypothetical protein
YP_004500366.1	HAMAP: ATP-dependent Clp protease proteolytic subunit; KEGG: spe:Spro_1978 ATP-dependent Clp protease proteolytic subunit; PFAM: Peptidase S14, ClpP
YP_004500367.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; KEGG: har:HEAR2418 hypothetical protein; SMART: Diguanylate cyclase, predicted; PAC motif
YP_004500368.1	KEGG: spe:Spro_1982 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related
YP_004500369.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_1983 sulfate transporter
YP_004500370.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: spe:Spro_1984 peptidyl-tRNA hydrolase
YP_004500371.1	PFAM: Protein of unknown function DUF2583; KEGG: spe:Spro_1985 hypothetical protein
YP_004500372.1	TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: spe:Spro_1986 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase
YP_004500373.1	PFAM: GHMP kinase; GHMP kinase, C-terminal; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: spe:Spro_1987 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_004500374.1	TIGRFAM: Outer membrane lipoprotein LolB; HAMAP: Outer-membrane lipoprotein lolB; KEGG: spe:Spro_1988 outer membrane lipoprotein LolB; PFAM: Outer membrane lipoprotein LolB
YP_004500375.1	PFAM: Chitin-binding, domain 3; KEGG: psm:PSM_B0253 chitinase B
YP_004500376.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; KEGG: spe:Spro_1989 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal
YP_004500377.1	TIGRFAM: Peptide chain release factor 1; HAMAP: Peptide chain release factor 1; KEGG: spe:Spro_1990 peptide chain release factor 1; PFAM: Class I peptide chain release factor; Peptide chain release factor
YP_004500378.1	KEGG: spe:Spro_1991 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small
YP_004500379.1	PFAM: Invasion gene expression up-regulator, SirB; KEGG: spe:Spro_1992 invasion gene expression up-regulator SirB
YP_004500380.1	KEGG: spe:Spro_1993 putative transcriptional regulator
YP_004500381.1	PFAM: DAHP synthetase I/KDSA; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; KEGG: spe:Spro_1994 2-dehydro-3-deoxyphosphooctonate aldolase
YP_004500382.1	KEGG: spe:Spro_1995 putative sulfate transporter YchM; TIGRFAM: Sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS
YP_004500383.1	KEGG: spe:Spro_1996 hypothetical protein; HAMAP: UPF0303 protein; PFAM: Protein of unknown function DUF336
YP_004500384.1	TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_1998 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004500385.1	KEGG: spe:Spro_1999 pyridoxal-5'-phosphate-dependent protein subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004500386.1	PFAM: YheO-like; KEGG: spe:Spro_2000 YheO domain-containing protein
YP_004500387.1	KEGG: spe:Spro_2001 outer membrane-specific lipoprotein transporter subunit LolC; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted
YP_004500388.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; PFAM: ABC transporter-like
YP_004500389.1	KEGG: spe:Spro_2003 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: Lipoprotein releasing system, transmembrane protein LolE; Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted
YP_004500390.1	HAMAP: N-acetyl-D-glucosamine kinase; KEGG: spe:Spro_2004 N-acetyl-D-glucosamine kinase; PFAM: ROK
YP_004500391.1	KEGG: spe:Spro_2005 NAD-dependent deacetylase; HAMAP: NAD-dependent deacetylase; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2
YP_004500392.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: spe:Spro_2006 RpiR family transcriptional regulator
YP_004500393.1	KEGG: spe:Spro_2007 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 4
YP_004500394.1	KEGG: spe:Spro_2008 PTS system glucose-like transporter subunit IIB; TIGRFAM: Phosphotransferase system, glucose-like IIB component; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004500395.1	PFAM: Peptidase M20, dimerisation; Peptidase M20; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; HAMAP: Peptidase T; KEGG: spe:Spro_2009 peptidase T
YP_004500396.1	KEGG: spe:Spro_2010 hypothetical protein; PFAM: Malate/L-lactate dehydrogenase
YP_004500397.1	KEGG: bam:Bamb_1993 beta-lactamase domain-containing protein
YP_004500398.1	KEGG: bam:Bamb_1991 hypothetical protein
YP_004500399.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bam:Bamb_1990 LysR family transcriptional regulator
YP_004500400.1	KEGG: spe:Spro_2011 cupin 4 family protein; PFAM: Cupin 4; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_004500401.1	KEGG: spe:Spro_2012 sensor protein PhoQ; PFAM: PhoQ Sensor; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004500402.1	KEGG: spe:Spro_2013 DNA-binding transcriptional regulator PhoP; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004500403.1	KEGG: spe:Spro_2017 transcriptional regulator; PFAM: Aminotransferase, class I/II; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004500404.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2018 GCN5-related N-acetyltransferase
YP_004500405.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2019 GCN5-related N-acetyltransferase
YP_004500406.1	TIGRFAM: Adenylosuccinate lyase; KEGG: spe:Spro_2020 adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase C-terminal
YP_004500407.1	KEGG: spe:Spro_2021 hypothetical protein; HAMAP: Uncharacterised protein family UPF0274; PFAM: Uncharacterised protein family UPF0274
YP_004500408.1	TIGRFAM: tRNA-specific 2-thiouridylase; HAMAP: tRNA-specific 2-thiouridylase; KEGG: spe:Spro_2022 tRNA-specific 2-thiouridylase MnmA; PFAM: tRNA methyl transferase-like
YP_004500409.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_2023 NUDIX hydrolase
YP_004500410.1	KEGG: spe:Spro_2024 pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004500411.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: spe:Spro_2025 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004500412.1	KEGG: spe:Spro_2605 peptidase S24/S26 domain-containing protein
YP_004500413.1	KEGG: pap:PSPA7_3898 transcriptional regulator LasR; PFAM: Transcription regulator LuxR, C-terminal; Autoinducer-binding; SMART: Transcription regulator LuxR, C-terminal
YP_004500414.1	KEGG: plu:plu1650 hypothetical protein
YP_004500415.1	PFAM: Protein of unknown function DUF159; KEGG: ebi:EbC_32170 conserved uncharacterized protein
YP_004500416.1	KEGG: ddc:Dd586_3999 hypothetical protein
YP_004500417.1	PFAM: Tol-Pal system, TolA; KEGG: spe:Spro_2049 colicin uptake-like protein
YP_004500420.1	PFAM: Uncharacterised protein family UPF0118; KEGG: spe:Spro_2050 hypothetical protein
YP_004500422.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rah:Rahaq_2484 GCN5-related N-acetyltransferase
YP_004500423.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pag:PLES_12641 putative major facilitator superfamily (MFS) transporter
YP_004500424.1	KEGG: spe:Spro_2053 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004500425.1	KEGG: spe:Spro_2054 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain
YP_004500426.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: spe:Spro_2055 oxidoreductase domain-containing protein
YP_004500427.1	KEGG: spe:Spro_2057 hypothetical protein
YP_004500428.1	PFAM: Protein of unknown function DUF1835; KEGG: spe:Spro_2058 hypothetical protein
YP_004500429.1	PFAM: Pentapeptide repeat; KEGG: spe:Spro_2059 pentapeptide repeat-containing protein
YP_004500430.1	KEGG: bpt:Bpet3617 hypothetical protein
YP_004500431.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bpy:Bphyt_7118 lysine exporter protein LysE/YggA
YP_004500432.1	KEGG: spe:Spro_2061 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004500433.1	KEGG: pst:PSPTO_2262 hypothetical protein
YP_004500434.1	KEGG: spe:Spro_2063 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500435.1	PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2064 FAD dependent oxidoreductase
YP_004500436.1	PFAM: Aldehyde dehydrogenase; KEGG: spe:Spro_2065 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
YP_004500437.1	KEGG: spe:Spro_2066 DNA-binding transcriptional repressor PuuR; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004500438.1	KEGG: spe:Spro_2067 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: Peptidase C26
YP_004500439.1	KEGG: spe:Spro_2068 glutamate--putrescine ligase; PFAM: Glutamine synthetase, catalytic region
YP_004500441.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_2069 amino acid permease-associated protein
YP_004500442.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_2070 hypothetical protein
YP_004500443.1	KEGG: spe:Spro_2071 hypothetical protein
YP_004500444.1	PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: spe:Spro_2072 nucleoside-specific channel-forming protein Tsx
YP_004500446.1	KEGG: spe:Spro_2073 hypothetical protein
YP_004500447.1	KEGG: spe:Spro_2074 chorismate mutase; TIGRFAM: Chorismate mutase, periplasmic; PFAM: Chorismate mutase, type II
YP_004500448.1	PFAM: Beta-lactamase-related; KEGG: spe:Spro_2075 beta-lactamase
YP_004500449.1	KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate deformylase; PFAM: N-formylglutamate amidohydrolase
YP_004500450.1	PFAM: Amidohydrolase 1; TIGRFAM: Imidazolonepropionase; HAMAP: Imidazolonepropionase; KEGG: spe:Spro_2077 imidazolonepropionase
YP_004500451.1	TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: spe:Spro_2078 histidine utilization repressor; SMART: HTH transcriptional regulator, GntR
YP_004500452.1	KEGG: spe:Spro_2079 N-formimino-L-glutamate deiminase; TIGRFAM: Formiminoglutamate deiminase; PFAM: Amidohydrolase 1
YP_004500453.1	PFAM: HutD; KEGG: spe:Spro_2080 hypothetical protein
YP_004500454.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: ddd:Dda3937_01664 UreA carboxylase-related ABC transporter periplasmic substrate-binding protein
YP_004500455.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rah:Rahaq_2161 binding-protein-dependent transport systems inner membrane component
YP_004500456.1	PFAM: ABC transporter-like; KEGG: rah:Rahaq_2162 ABC transporter; SMART: ATPase, AAA+ type, core
YP_004500457.1	PFAM: Aminotransferase, class I/II; TIGRFAM: Histidinol-phosphate aminotransferase; HAMAP: Histidinol-phosphate aminotransferase; KEGG: rah:Rahaq_2165 histidinol-phosphate aminotransferase
YP_004500458.1	KEGG: rah:Rahaq_2166 (S)-mandelate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004500459.1	KEGG: spe:Spro_2081 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004500460.1	TIGRFAM: Sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; KEGG: spe:Spro_2082 sucrose-6-phosphate hydrolase; SMART: Glycoside hydrolase, family 32
YP_004500461.1	KEGG: spe:Spro_2083 galactoside permease; TIGRFAM: Proton/sugar symporter, LacY; PFAM: Proton/sugar symporter, LacY
YP_004500462.1	KEGG: rah:Rahaq_2168 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500463.1	KEGG: rah:Rahaq_2169 hypothetical protein
YP_004500464.1	PFAM: Histidinol dehydrogenase, prokaryotic-type; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; HAMAP: Histidinol dehydrogenase, prokaryotic-type; KEGG: rah:Rahaq_2170 histidinol dehydrogenase
YP_004500465.1	PFAM: ABC transporter-like; KEGG: rah:Rahaq_2171 ABC transporter; SMART: ATPase, AAA+ type, core
YP_004500466.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rah:Rahaq_2172 binding-protein-dependent transport systems inner membrane component
YP_004500467.1	KEGG: rah:Rahaq_2173 hypothetical protein
YP_004500468.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2084 major facilitator transporter
YP_004500469.1	KEGG: aha:AHA_3212 hypothetical protein
YP_004500470.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aha:AHA_3213 TetR family transcriptional regulator
YP_004500471.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ebi:EbC_44900 LysR family transcriptional regulator
YP_004500472.1	KEGG: ddc:Dd586_1724 amidohydrolase; PFAM: Amidohydrolase 1
YP_004500473.1	PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; KEGG: spe:Spro_2098 phosphoenolpyruvate carboxykinase
YP_004500474.1	PFAM: 2-hydroxycarboxylate transporter; KEGG: spe:Spro_2099 citrate carrier protein
YP_004500475.1	KEGG: spe:Spro_2101 hypothetical protein
YP_004500476.1	KEGG: spe:Spro_2102 hypothetical protein
YP_004500478.1	PFAM: ASCH domain; KEGG: spe:Spro_2104 hypothetical protein
YP_004500479.1	KEGG: spe:Spro_2105 hypothetical protein
YP_004500480.1	PFAM: Protein of unknown function DUF1480; KEGG: spe:Spro_2106 hypothetical protein
YP_004500481.1	PFAM: Spore coat protein U; KEGG: spe:Spro_2107 spore coat U domain-containing protein
YP_004500482.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: spe:Spro_2108 fimbrial biogenesis outer membrane usher protein
YP_004500483.1	KEGG: spe:Spro_2109 putative chaperone protein
YP_004500484.1	PFAM: Spore coat protein U; KEGG: spe:Spro_2110 spore coat U domain-containing protein
YP_004500485.1	PFAM: Spore coat protein U; KEGG: spe:Spro_2111 spore coat U domain-containing protein
YP_004500486.1	PFAM: Spore coat protein U; KEGG: spe:Spro_2112 spore coat U domain-containing protein
YP_004500487.1	TIGRFAM: Nop2p; HAMAP: Ribosomal RNA small subunit methyltransferase F; KEGG: spe:Spro_2113 rRNA (cytosine-C(5)-)-methyltransferase RsmF; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
YP_004500488.1	PFAM: Mammalian cell entry related; KEGG: yen:YE1864 hypothetical protein
YP_004500489.1	KEGG: spe:Spro_2116 PqiA family integral membrane protein; TIGRFAM: Conserved hypothetical protein CHP00155; PFAM: Paraquat-inducible protein A
YP_004500490.1	KEGG: spe:Spro_2117 putative GAF sensor protein; PFAM: GAF; SMART: GAF
YP_004500491.1	KEGG: spe:Spro_2118 putative solute/DNA competence effector; HAMAP: ProP effector; PFAM: Fertility inhibition FinO-like
YP_004500492.1	SMART: Peptidase S41; PDZ/DHR/GLGF; TIGRFAM: Peptidase S41A, C-terminal protease; KEGG: spe:Spro_2119 carboxy-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF
YP_004500493.1	KEGG: tra:Trad_0278 hypothetical protein
YP_004500494.1	HAMAP: protease htpX; KEGG: spe:Spro_2120 heat shock protein HtpX
YP_004500495.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2121 major facilitator transporter
YP_004500496.1	KEGG: spe:Spro_2122 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004500497.1	PFAM: Sodium:dicarboxylate symporter; KEGG: spe:Spro_2123 sodium:dicarboxylate symporter
YP_004500498.1	PFAM: Protein of unknown function DUF457, transmembrane; KEGG: spe:Spro_2124 hypothetical protein
YP_004500499.1	KEGG: spe:Spro_2125 2-deoxyglucose-6-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004500500.1	KEGG: spe:Spro_2126 membrane-bound protease
YP_004500501.1	KEGG: spe:Spro_2127 putative yfeABCD locus regulator
YP_004500502.1	PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: spe:Spro_2128 fructosamine kinase
YP_004500503.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2129 GCN5-related N-acetyltransferase
YP_004500504.1	PFAM: ABC-3; KEGG: spe:Spro_2130 ABC-3 protein
YP_004500505.1	PFAM: ABC-3; KEGG: spe:Spro_2131 ABC-3 protein
YP_004500506.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2132 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500507.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: spe:Spro_2133 periplasmic solute binding protein
YP_004500508.1	KEGG: spe:Spro_2134 hypothetical protein
YP_004500509.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: spe:Spro_2135 lytic transglycosylase catalytic
YP_004500510.1	KEGG: spe:Spro_2136 gluconate 2-dehydrogenase
YP_004500511.1	KEGG: spe:Spro_2137 gluconate 2-dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal
YP_004500512.1	KEGG: spe:Spro_2138 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004500513.1	KEGG: spe:Spro_2139 serine transporter
YP_004500514.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_2140 periplasmic binding protein
YP_004500515.1	KEGG: spe:Spro_2141 multiple drug resistance protein MarC; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004500516.1	KEGG: spe:Spro_2142 hypothetical protein
YP_004500518.1	KEGG: spe:Spro_2144 threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding
YP_004500519.1	PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; manually curated; KEGG: ypi:YpsIP31758_1713 translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; HAMAP: Translation initiation factor IF-3
YP_004500520.1	KEGG: spe:Spro_2146 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; PFAM: Ribosomal protein L35
YP_004500521.1	KEGG: spe:Spro_2147 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20
YP_004500522.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; KEGG: spe:Spro_2148 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_004500523.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: spe:Spro_2149 phenylalanyl-tRNA synthetase subunit beta
YP_004500524.1	TIGRFAM: Integration host factor, alpha subunit; PFAM: Histone-like bacterial DNA-binding protein; KEGG: spe:Spro_2150 integration host factor subunit alpha; SMART: Histone-like bacterial DNA-binding protein
YP_004500526.1	PFAM: Protein of unknown function DUF2502; KEGG: rah:Rahaq_2828 hypothetical protein
YP_004500527.1	KEGG: spe:Spro_2151 vtamin B12-transporter permease; HAMAP: Vitamin B12 import system permease protein btuC; PFAM: Bacterial transport system permease protein
YP_004500528.1	KEGG: spe:Spro_2152 putative glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004500529.1	SMART: ATPase, AAA+ type, core; HAMAP: Vitamin B12 import ATP-binding protein btuD; KEGG: spe:Spro_2153 vitamin B12-transporter ATPase; PFAM: ABC transporter-like
YP_004500530.1	HAMAP: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; KEGG: spe:Spro_2154 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004500531.1	KEGG: spe:Spro_2155 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; HAMAP: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; PFAM: Glycosyl transferase, family 2
YP_004500532.1	HAMAP: Bifunctional polymyxin resistance protein ArnA; KEGG: spe:Spro_2156 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; PFAM: NAD-dependent epimerase/dehydratase; Formyl transferase, C-terminal; Formyl transferase, N-terminal
YP_004500533.1	KEGG: spe:Spro_2157 polysaccharide deacetylase; HAMAP: 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; PFAM: Polysaccharide deacetylase
YP_004500534.1	KEGG: spe:Spro_2158 4-amino-4-deoxy-L-arabinose transferase; HAMAP: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase; PFAM: Glycosyl transferase, family 39
YP_004500535.1	KEGG: spe:Spro_2159 hypothetical protein; HAMAP: 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; PFAM: Protein of unknown function DUF6, transmembrane
YP_004500536.1	HAMAP: 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; KEGG: spe:Spro_2160 hypothetical protein
YP_004500537.1	PFAM: NLP/P60; KEGG: spe:Spro_2161 NLP/P60 protein
YP_004500538.1	TIGRFAM: Lipoyltransferase/lipoate-protein ligase; HAMAP: Lipoate-protein ligase A; KEGG: spe:Spro_2162 lipoate-protein ligase A; PFAM: Lipoate protein ligase, C-terminal; Biotin/lipoate A/B protein ligase
YP_004500539.1	manually curated; PFAM: Diguanylate phosphodiesterase, predicted; KEGG: spe:Spro_2163 diguanylate phosphodiesterase; SMART: Diguanylate phosphodiesterase, predicted
YP_004500540.1	KEGG: spe:Spro_2164 hypothetical protein; HAMAP: UPF0061 protein ydiU; PFAM: Uncharacterised protein family UPF0061
YP_004500541.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2165 hemin importer ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004500542.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_2166 transport system permease
YP_004500543.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_2167 periplasmic binding protein
YP_004500544.1	PFAM: Haemin-degrading; KEGG: spe:Spro_2168 hemin-degrading family protein
YP_004500545.1	KEGG: spe:Spro_2169 TonB-dependent heme/hemoglobin receptor family protein; TIGRFAM: TonB-dependent haem/haemoglobin receptor; TonB-dependent haemoglobin/transferrin/lactoferrin receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004500546.1	PFAM: Hemin uptake protein hemP; KEGG: spe:Spro_2170 hypothetical protein
YP_004500547.1	KEGG: spe:Spro_2171 glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004500548.1	TIGRFAM: DHAP synthase, class 1; KEGG: spe:Spro_2172 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004500549.1	KEGG: spe:Spro_2173 hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted
YP_004500550.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: spe:Spro_2174 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme
YP_004500551.1	PFAM: Uncharacterised protein family UPF0118; KEGG: spe:Spro_2175 hypothetical protein
YP_004500552.1	KEGG: spe:Spro_2176 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004500553.1	manually curated; TIGRFAM: Phenylacetic acid degradation-related protein; KEGG: spe:Spro_2177 thioesterase superfamily protein; PFAM: Thioesterase superfamily
YP_004500554.1	KEGG: spe:Spro_2178 hypothetical protein
YP_004500555.1	KEGG: spe:Spro_2179 iron-sulfur cluster assembly scaffold protein; TIGRFAM: SUF system FeS cluster assembly, SufA scaffold; FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_004500556.1	manually curated; TIGRFAM: SUF system FeS cluster assembly, SufB; KEGG: spe:Spro_2180 cysteine desulfurase activator complex subunit SufB; PFAM: SUF system FeS cluster assembly, SufBD
YP_004500557.1	TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; PFAM: ABC transporter-like; KEGG: spe:Spro_2181 cysteine desulfurase ATPase; SMART: ATPase, AAA+ type, core
YP_004500558.1	KEGG: spe:Spro_2182 FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; PFAM: SUF system FeS cluster assembly, SufBD
YP_004500559.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; HAMAP: Cysteine desulfurase; KEGG: spe:Spro_2183 SufS subfamily cysteine desulfurase
YP_004500560.1	KEGG: spe:Spro_2184 cysteine desufuration protein SufE; HAMAP: Cysteine desulfuration protein sufE; PFAM: Fe-S metabolism associated SufE
YP_004500561.1	PFAM: YkuD domain; KEGG: spe:Spro_2185 ErfK/YbiS/YcfS/YnhG family protein
YP_004500562.1	PFAM: LPP motif; KEGG: pao:Pat9b_1673 LPP repeat-containing protein
YP_004500563.1	TIGRFAM: Pyruvate kinase; KEGG: spe:Spro_2187 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta
YP_004500564.1	PFAM: Cupin 2, conserved barrel; KEGG: spe:Spro_2188 cupin 2 domain-containing protein
YP_004500565.1	TIGRFAM: Multi antimicrobial extrusion protein MatE; HAMAP: Multidrug resistance protein mdtK; KEGG: spe:Spro_2189 multidrug efflux protein; PFAM: Multi antimicrobial extrusion protein MatE
YP_004500566.1	TIGRFAM: Lumazine-binding protein; KEGG: spe:Spro_2190 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004500567.1	KEGG: spe:Spro_2191 hypothetical protein
YP_004500568.1	KEGG: spe:Spro_2192 cyclopropane fatty acyl phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004500569.1	KEGG: spe:Spro_2193 inner membrane transport protein YdhC; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004500570.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2194 putative DNA-binding transcriptional regulator
YP_004500571.1	HAMAP: HTH-type transcriptional repressor purR; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; KEGG: spe:Spro_2195 DNA-binding transcriptional repressor PurR; SMART: HTH transcriptional regulator, LacI
YP_004500572.1	PFAM: NLP/P60; KEGG: spe:Spro_2197 NLP/P60 protein
YP_004500573.1	KEGG: spe:Spro_2198 hypothetical protein; TIGRFAM: Glutaredoxin-related protein; PFAM: Glutaredoxin
YP_004500574.1	SMART: Exonuclease; TIGRFAM: Ribonuclease T; KEGG: spe:Spro_2199 ribonuclease T; HAMAP: Ribonuclease T; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004500575.1	TIGRFAM: Glyoxalase I; KEGG: spe:Spro_2200 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004500576.1	PFAM: NUDIX hydrolase domain; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; HAMAP: Isopentenyl-diphosphate Delta-isomerase; KEGG: spe:Spro_2201 isopentenyl-diphosphate delta-isomerase, type 1
YP_004500577.1	KEGG: spe:Spro_2202 N-ethylmaleimide reductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004500578.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2203 TetR family transcriptional regulator
YP_004500579.1	PFAM: Protein of unknown function DUF1705; Sulfatase; KEGG: spe:Spro_2204 putative cell division protein
YP_004500580.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_2205 NAD-dependent epimerase/dehydratase
YP_004500581.1	KEGG: spe:Spro_2206 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004500582.1	PFAM: Protein of unknown function DUF1289; KEGG: spe:Spro_2207 hypothetical protein
YP_004500583.1	PFAM: Aldo/keto reductase; KEGG: spe:Spro_2208 aldo/keto reductase
YP_004500584.1	KEGG: spe:Spro_2209 triacylglycerol lipase; PFAM: Lipase, class 3; Haemolysin-type calcium-binding region
YP_004500585.1	KEGG: spe:Spro_2210 superoxide dismutase; PFAM: Superoxide dismutase, copper/zinc binding
YP_004500586.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_2211 fusaric acid resistance protein region
YP_004500587.1	PFAM: Secretion protein HlyD; KEGG: spe:Spro_2212 secretion protein HlyD family protein
YP_004500588.1	KEGG: spe:Spro_2213 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1656
YP_004500589.1	HAMAP: Transcriptional regulator slyA; PFAM: HTH transcriptional regulator, MarR; KEGG: spe:Spro_2214 transcriptional regulator SlyA; SMART: HTH transcriptional regulator, MarR
YP_004500590.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: spe:Spro_2215 17 kDa surface antigen
YP_004500591.1	KEGG: spe:Spro_2216 anhydro-N-acetylmuramic acid kinase; HAMAP: Anhydro-N-acetylmuramic acid kinase; PFAM: Anhydro-N-acetylmuramic acid kinase
YP_004500592.1	PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: spe:Spro_2217 putative lipoprotein
YP_004500593.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; KEGG: spe:Spro_2218 pyridoxamine 5'-phosphate oxidase
YP_004500594.1	KEGG: spe:Spro_2219 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; HAMAP: Tyrosyl-tRNA synthetase; SMART: RNA-binding S4
YP_004500595.1	PFAM: Carbohydrate/purine kinase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase; HAMAP: Pyridoxamine kinase; KEGG: spe:Spro_2220 pyridoxamine kinase
YP_004500596.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spe:Spro_2221 glutathionine S-transferase
YP_004500597.1	TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: spe:Spro_2222 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase
YP_004500598.1	KEGG: spe:Spro_2223 hypothetical protein
YP_004500599.1	KEGG: spe:Spro_2224 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region
YP_004500600.1	KEGG: spe:Spro_2225 hypothetical protein
YP_004500601.1	KEGG: rah:Rahaq_2762 hypothetical protein
YP_004500602.1	KEGG: esa:ESA_pESA3p05455 hypothetical protein
YP_004500603.1	KEGG: atu:Atu0742 hypothetical protein
YP_004500604.1	PFAM: Endoribonuclease L-PSP; KEGG: spe:Spro_2226 endoribonuclease L-PSP
YP_004500605.1	PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: spe:Spro_2227 aminoglycoside/hydroxyurea antibiotic resistance kinase
YP_004500606.1	PFAM: Cupin 2, conserved barrel; KEGG: spe:Spro_2228 cupin 2 domain-containing protein
YP_004500607.1	PFAM: MEKHLA; KEGG: spe:Spro_2229 MEKHLA domain-containing protein
YP_004500608.1	KEGG: spe:Spro_2230 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004500609.1	KEGG: spe:Spro_2231 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004500610.1	KEGG: spe:Spro_2232 prolyl oligopeptidase
YP_004500611.1	KEGG: spe:Spro_2233 putative tripeptide transporter permease; TIGRFAM: Amino acid/peptide transporter; PFAM: Oligopeptide transporter
YP_004500612.1	KEGG: plu:plu2272 hypothetical protein; PFAM: Glycoside hydrolase, family 30
YP_004500613.1	KEGG: kva:Kvar_0588 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; PFAM: Major facilitator superfamily MFS-1
YP_004500614.1	KEGG: kva:Kvar_0587 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500615.1	KEGG: kva:Kvar_0587 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500616.1	KEGG: kva:Kvar_0588 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; PFAM: Major facilitator superfamily MFS-1
YP_004500617.1	KEGG: mrb:Mrub_0289 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43
YP_004500618.1	SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: spe:Spro_2234 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004500619.1	TIGRFAM: Electron transport complex, RnfE; HAMAP: Electron transport complex protein rnfE; KEGG: spe:Spro_2235 electron transport complex RsxE subunit; PFAM: Electron transport complex, Rnf/Nqr
YP_004500620.1	TIGRFAM: Electron transport complex, RnfG; HAMAP: Electron transport complex protein rnfG; KEGG: spe:Spro_2236 electron transport complex protein RnfG; PFAM: FMN-binding
YP_004500621.1	TIGRFAM: Electron transport complex, RnfD; HAMAP: Electron transport complex protein rnfD; KEGG: spe:Spro_2237 electron transport complex protein RnfD; PFAM: NADH-quinone reductase NQR2/RnfD
YP_004500622.1	KEGG: spe:Spro_2238 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500623.1	TIGRFAM: Electron transport complex, RnfC; HAMAP: Electron transport complex protein rnfC; KEGG: spe:Spro_2239 RnfABCDGE type electron transport complex subunit C; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004500624.1	TIGRFAM: Electron transport complex, RnfB; HAMAP: Electron transport complex, RnfB, subgroup; KEGG: spe:Spro_2240 electron transport complex protein RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004500625.1	KEGG: spe:Spro_2241 RnfABCDGE type electron transport complex subunit A; TIGRFAM: Electron transport complex, RnfA; PFAM: Electron transport complex, Rnf/Nqr
YP_004500626.1	PFAM: Protein of unknown function DUF2569; KEGG: spe:Spro_2242 hypothetical protein
YP_004500627.1	HAMAP: L-arabinose isomerase; KEGG: spe:Spro_2243 L-arabinose isomerase; PFAM: L-arabinose isomerase
YP_004500628.1	PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal; TIGRFAM: L-ribulokinase; HAMAP: L-ribulokinase; KEGG: spe:Spro_2244 ribulokinase
YP_004500629.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2245 monosaccharide-transporting ATPase
YP_004500630.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2246 L-arabinose transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004500631.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_2247 L-arabinose transporter permease
YP_004500632.1	KEGG: spe:Spro_2248 DNA-binding transcriptional regulator AraC; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500633.1	KEGG: ami:Amir_3801 hypothetical protein
YP_004500634.1	PFAM: Methyltransferase type 11; KEGG: plu:plu3986 hypothetical protein
YP_004500635.1	PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; TIGRFAM: Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; KEGG: brh:RBRH_01161 1-deoxy-D-xylulose 5-phosphate synthase
YP_004500636.1	PFAM: NUDIX hydrolase domain; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; HAMAP: Isopentenyl-diphosphate Delta-isomerase; KEGG: spe:Spro_2201 isopentenyl-diphosphate delta-isomerase, type 1
YP_004500637.1	PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: spe:Spro_2249 putative oxidoreductase
YP_004500638.1	KEGG: spe:Spro_2250 hypothetical protein
YP_004500639.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: Adenosine deaminase; HAMAP: Adenosine deaminase; KEGG: spe:Spro_2251 adenosine deaminase
YP_004500640.1	KEGG: spe:Spro_2252 putative serine protease
YP_004500641.1	PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: spe:Spro_2253 putative PTS IIA-like nitrogen-regulatory protein PtsN
YP_004500642.1	KEGG: spe:Spro_2254 hypothetical protein
YP_004500643.1	TIGRFAM: Ketose-bisphosphate aldolase, class-II; KEGG: spe:Spro_2255 ketose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004500644.1	KEGG: spe:Spro_2256 PTS system ascorbate-specific transporter subunit IIC
YP_004500645.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_2257 phosphotransferase system lactose/cellobiose-specific IIB subunit
YP_004500646.1	KEGG: spe:Spro_2258 phosphofructokinase; PFAM: Phosphofructokinase
YP_004500647.1	KEGG: spe:Spro_2259 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004500648.1	KEGG: spe:Spro_2260 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain
YP_004500649.1	KEGG: spe:Spro_2261 hypothetical protein
YP_004500650.1	KEGG: spe:Spro_2262 aminotransferase class I and II; PFAM: Aminotransferase, class I/II
YP_004500651.1	TIGRFAM: PTS system, maltose/glucose-specific IIBC component; Phosphotransferase system, maltose/glucose-specific IIC component; Phosphotransferase system, glucose-like IIB component; KEGG: yen:YE2011 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004500652.1	KEGG: spe:Spro_2271 DNA-binding transcriptional repressor MalI; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004500653.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2272 LysR family transcriptional regulator
YP_004500654.1	KEGG: spe:Spro_2273 beta-lactamase; PFAM: Beta-lactamase-related
YP_004500655.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2274 LysR family transcriptional regulator
YP_004500656.1	PFAM: Beta-lactamase-related; KEGG: spe:Spro_2275 beta-lactamase
YP_004500657.1	PFAM: Protein of unknown function DUF945, bacterial; KEGG: spe:Spro_2276 hypothetical protein
YP_004500658.1	TIGRFAM: Mannose-6-phosphate isomerase, type I; KEGG: spe:Spro_2277 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I
YP_004500659.1	KEGG: spe:Spro_2278 hypothetical protein
YP_004500660.1	PFAM: Fumarate lyase; Fumarase C, C-terminal; TIGRFAM: Fumarate hydratase, class II; HAMAP: Fumarate hydratase class II; KEGG: spe:Spro_2279 fumarate hydratase
YP_004500661.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gdi:GDI_2772 putative alkyl hydroperoxide reductase
YP_004500662.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bgf:BC1003_1327 LysR family transcriptional regulator
YP_004500663.1	KEGG: rhi:NGR_c35550 putative transcriptional regulator
YP_004500664.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll3207 hypothetical protein
YP_004500665.1	TIGRFAM: DNA replication terminus site-binding protein; HAMAP: DNA replication terminus site-binding protein; KEGG: spe:Spro_2280 DNA replication terminus site-binding protein; PFAM: DNA replication terminus site-binding protein
YP_004500666.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2281 major facilitator transporter
YP_004500667.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2282 LysR family transcriptional regulator
YP_004500668.1	KEGG: spe:Spro_2283 ROK family protein; PFAM: ROK
YP_004500669.1	TIGRFAM: Dethiobiotin synthase; HAMAP: Dethiobiotin synthase; KEGG: spe:Spro_2284 dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004500670.1	KEGG: spe:Spro_2285 putative voltage-gated ClC-type chloride channel ClcB; HAMAP: Voltage-gated ClC-type chloride channel clcB; PFAM: Chloride channel, voltage gated
YP_004500671.1	KEGG: spe:Spro_2286 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004500672.1	PFAM: Protein of unknown function DUF1161; KEGG: spe:Spro_2287 hypothetical protein
YP_004500673.1	KEGG: spe:Spro_2288 hypothetical protein; HAMAP: Protein of unknown function DUF1283; PFAM: Protein of unknown function DUF1283
YP_004500674.1	KEGG: spe:Spro_2289 hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; PFAM: Uncharacterised protein family UPF0060
YP_004500675.1	KEGG: spe:Spro_2290 3-hydroxy acid dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500676.1	KEGG: spe:Spro_2291 GCN5-related N-acetyltransferase
YP_004500677.1	PFAM: Aldo/keto reductase; KEGG: rah:Rahaq_2226 aldo/keto reductase
YP_004500678.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2292 major facilitator transporter
YP_004500679.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2293 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500680.1	PFAM: Carbohydrate/purine kinase; KEGG: spe:Spro_2294 ribokinase-like domain-containing protein
YP_004500681.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2295 binding-protein-dependent transport systems inner membrane component
YP_004500682.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2296 binding-protein-dependent transport systems inner membrane component
YP_004500683.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_2297 extracellular solute-binding protein
YP_004500684.1	PFAM: ROK; KEGG: spe:Spro_2298 ROK family protein
YP_004500686.1	KEGG: ypb:YPTS_3504 fibronectin type III domain-containing protein; PFAM: Chitin-binding, domain 3; Fibronectin, type III; Carbohydrate-binding domain, family 5/12; SMART: Fibronectin, type III; Carbohydrate-binding domain, family 5/12
YP_004500687.1	KEGG: pst:PSPTO_0400 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; Fibronectin, type III; Carbohydrate-binding domain, family 5/12; SMART: Fibronectin, type III; Chitinase II
YP_004500688.1	TIGRFAM: Guanine deaminase; KEGG: spe:Spro_2299 guanine deaminase; PFAM: Amidohydrolase 1
YP_004500689.1	TIGRFAM: Xanthine dehydrogenase, small subunit; KEGG: spe:Spro_2300 xanthine dehydrogenase small subunit; PFAM: Molybdopterin dehydrogenase, FAD-binding; [2Fe-2S]-binding; Ferredoxin; CO dehydrogenase flavoprotein, C-terminal
YP_004500690.1	TIGRFAM: Xanthine dehydrogenase, molybdopterin binding subunit; KEGG: spe:Spro_2301 xanthine dehydrogenase molybdopterin binding subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004500691.1	KEGG: spe:Spro_2302 xanthine dehydrogenase accessory protein XdhC; TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: XdhC- CoxI
YP_004500692.1	KEGG: eta:ETA_14010 6-phospho-alpha-glucosidase; PFAM: Glycoside hydrolase, family 4
YP_004500693.1	TIGRFAM: Phosphotransferase system, alpha-glucoside-specific IIBC component; Phosphotransferase system, maltose/glucose-specific IIC component; Phosphotransferase system, glucose-like IIB component; KEGG: kva:Kvar_0018 PTS system, alpha-glucoside-specific IIBC subunit; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004500694.1	KEGG: aha:AHA_0117 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004500695.1	PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: eta:ETA_16540 sucrose isomerase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004500696.1	manually curated; KEGG: axy:AXYL_03557 hypothetical protein
YP_004500697.1	KEGG: spe:Spro_2306 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_004500698.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2307 major facilitator transporter
YP_004500699.1	KEGG: spe:Spro_2308 N-carbamoylsarcosine amidase; PFAM: Isochorismatase-like
YP_004500700.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: spe:Spro_2309 Asp/Glu racemase
YP_004500701.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_2310 alpha/beta hydrolase fold domain-containing protein
YP_004500702.1	KEGG: spe:Spro_2311 monooxygenase FAD-binding; PFAM: Amine oxidase
YP_004500703.1	KEGG: spe:Spro_2312 hypothetical protein
YP_004500704.1	KEGG: spe:Spro_2313 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004500705.1	KEGG: spe:Spro_2314 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004500706.1	KEGG: spe:Spro_2315 aldehyde oxidase and xanthine dehydrogenas; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Cytochrome c, class I
YP_004500707.1	PFAM: Secretion protein HlyD; Biotin/lipoyl attachment; KEGG: spe:Spro_2316 secretion protein HlyD family protein
YP_004500708.1	PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane region; KEGG: spe:Spro_2317 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500709.1	PFAM: Monooxygenase, FAD-binding; KEGG: spe:Spro_2318 monooxygenase FAD-binding
YP_004500710.1	PFAM: Peptidase S58, DmpA; KEGG: rah:Rahaq_2425 peptidase S58 DmpA
YP_004500711.1	PFAM: Protein of unknown function DUF1003; KEGG: pfl:PFL_4534 hypothetical protein
YP_004500712.1	KEGG: spe:Spro_2319 aldehyde oxidase and xanthine dehydrogenas; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004500713.1	KEGG: spe:Spro_2320 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding; Ferredoxin
YP_004500714.1	KEGG: spe:Spro_2321 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004500715.1	TIGRFAM: Phosphotransferase system, beta-glucoside-specific IIABC component; Phosphotransferase system, sugar-specific permease EIIA 1 domain; KEGG: spe:Spro_2323 PTS system beta-glucoside-specific transporter subunit IIABC; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004500716.1	KEGG: spe:Spro_2324 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 1
YP_004500717.1	PFAM: CAT RNA-binding region; PRD; KEGG: spe:Spro_2325 transcriptional antiterminator, BglG
YP_004500718.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2326 LysR family transcriptional regulator
YP_004500719.1	PFAM: Chromate transporter region; KEGG: spe:Spro_2327 chromate transporter
YP_004500720.1	PFAM: Chromate transporter region; KEGG: spe:Spro_2328 chromate transporter
YP_004500721.1	PFAM: Metalloprotease inhibitor I38; KEGG: spe:Spro_2329 metalloprotease inhibitor I38
YP_004500722.1	KEGG: spe:Spro_2330 putative lipoprotein
YP_004500723.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: ebi:EbC_42330 phytanoyl-CoA dioxygenase
YP_004500724.1	KEGG: avn:Avin_26200 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004500725.1	KEGG: avn:Avin_26190 LacI regulatory protein; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004500726.1	KEGG: epy:EpC_22790 hypothetical protein
YP_004500727.1	PFAM: Peptidase C39, bacteriocin processing; KEGG: eay:EAM_2822 bacteriocin processing peptidase
YP_004500728.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_2336 hypothetical protein
YP_004500729.1	KEGG: spe:Spro_2337 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500730.1	KEGG: spe:Spro_2338 hypothetical protein
YP_004500731.1	KEGG: sna:Snas_2099 hypothetical protein
YP_004500732.1	PFAM: NIPSNAP; KEGG: pmu:PM1467 hypothetical protein
YP_004500733.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2339 major facilitator transporter
YP_004500734.1	KEGG: spe:Spro_2340 hypothetical protein
YP_004500735.1	TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; KEGG: spe:Spro_2341 mannosyl-3-phosphoglycerate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3
YP_004500736.1	KEGG: spe:Spro_2342 hypothetical protein
YP_004500737.1	KEGG: spe:Spro_2343 hypothetical protein
YP_004500738.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_2344 GCN5-related N-acetyltransferase
YP_004500739.1	KEGG: spe:Spro_2345 RpiR family transcriptional regulator
YP_004500740.1	PFAM: Peptidase M15D, vanX D-ala-D-ala dipeptidase; KEGG: spe:Spro_2346 D-alanyl-D-alanine dipeptidase
YP_004500741.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2347 extracellular solute-binding protein
YP_004500742.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2348 binding-protein-dependent transport systems inner membrane component
YP_004500743.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2349 ATP-dependent peptide transporter membrane subunit
YP_004500744.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2350 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004500745.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2351 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004500746.1	KEGG: spe:Spro_2352 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: Bacterial transferase hexapeptide repeat
YP_004500747.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2353 major facilitator transporter
YP_004500748.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2354 LysR family transcriptional regulator
YP_004500749.1	KEGG: spe:Spro_2355 hypothetical protein
YP_004500750.1	TIGRFAM: Penicillin-binding protein 2; KEGG: spe:Spro_2356 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004500751.1	KEGG: spe:Spro_2357 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004500752.1	KEGG: spe:Spro_2359 osmotically inducible lipoprotein
YP_004500753.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rah:Rahaq_3469 GCN5-related N-acetyltransferase
YP_004500754.1	PFAM: Protein of unknown function DUF2592; KEGG: spe:Spro_2360 hypothetical protein
YP_004500755.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2361 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500756.1	KEGG: spe:Spro_2362 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004500757.1	KEGG: spe:Spro_2363 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004500758.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: spe:Spro_2364 xenobiotic compound monooxygenase subunit A
YP_004500759.1	PFAM: MmgE/PrpD; KEGG: spe:Spro_2365 MmgE/PrpD family protein
YP_004500760.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bid:Bind_1454 LysR family transcriptional regulator
YP_004500761.1	PFAM: Beta-lactamase-related; KEGG: reh:H16_A1195 beta-lactamase
YP_004500762.1	PFAM: Major facilitator superfamily MFS-1; KEGG: avn:Avin_35860 major facilitator superfamily transporter
YP_004500763.1	KEGG: spe:Spro_0530 entry exclusion protein 2
YP_004500764.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2367 major facilitator transporter
YP_004500765.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: amr:AM1_4848 riboflavin biosynthesis protein RibD domain-containing protein
YP_004500766.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_2368 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004500767.1	KEGG: spe:Spro_2369 hypothetical protein
YP_004500768.1	KEGG: spe:Spro_2370 hypothetical protein
YP_004500769.1	KEGG: spe:Spro_2371 hypothetical protein; PFAM: Alcohol dehydrogenase, iron-type
YP_004500770.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_2372 NAD-dependent epimerase/dehydratase
YP_004500771.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2373 TetR family transcriptional regulator
YP_004500772.1	PFAM: Pirin, N-terminal; KEGG: dze:Dd1591_0941 pirin domain-containing protein
YP_004500773.1	PFAM: DoxX; KEGG: rec:RHECIAT_CH0000673 hypothetical protein
YP_004500774.1	KEGG: abb:ABBFA_001781 FMN-dependent NADH-azoreductase; HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold
YP_004500775.1	KEGG: axy:AXYL_02294 HxlR-like helix-turn-helix family protein 1; manually curated; PFAM: Helix-turn-helix, HxlR type
YP_004500776.1	KEGG: rah:Rahaq_2721 hypothetical protein
YP_004500777.1	KEGG: vpe:Varpa_4097 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004500778.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rah:Rahaq_2723 LysR family transcriptional regulator
YP_004500779.1	KEGG: rah:Rahaq_2719 hypothetical protein
YP_004500780.1	PFAM: ABC transporter-like; Transport-associated OB, type 1; KEGG: ypb:YPTS_3224 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500781.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: yps:YPTB3101 ABC type periplasmic sugar(maltose)-binding protein
YP_004500782.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3222 binding-protein-dependent transport systems inner membrane component
YP_004500783.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ypb:YPTS_3221 binding-protein-dependent transport systems inner membrane component
YP_004500784.1	KEGG: ypb:YPTS_3220 glycosyl hydrolase 53 protein; PFAM: Glycosyl hydrolase 53
YP_004500785.1	KEGG: ypb:YPTS_3219 glycoside hydrolase family 42 protein; PFAM: Glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal
YP_004500786.1	PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ypb:YPTS_3218 PTS system transporter subunit EIIB
YP_004500787.1	KEGG: enc:ECL_02641 maltoporin 1; HAMAP: Maltoporin; PFAM: Porin, LamB type
YP_004500788.1	KEGG: dze:Dd1591_1283 lac repressor; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004500789.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: psp:PSPPH_2305 TetR family transcriptional regulator
YP_004500790.1	PFAM: Major facilitator superfamily MFS-1; KEGG: psp:PSPPH_2306 major facilitator family transporter
YP_004500791.1	KEGG: spe:Spro_2383 CopG/DNA-binding domain-containing protein
YP_004500792.1	PFAM: Protein of unknown function DUF156; KEGG: enc:ECL_A112 nickel-resistant pritein NirB
YP_004500793.1	PFAM: Nickel/cobalt transporter, high-affinity; KEGG: enc:ECL_A111 nickel-resistant membrane protein-like protein NcrC
YP_004500794.1	PFAM: CopG-like DNA-binding; KEGG: spe:Spro_2383 CopG/DNA-binding domain-containing protein
YP_004500795.1	KEGG: spe:Spro_2384 spermidine synthase-like protein
YP_004500796.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: spe:Spro_2385 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004500797.1	TIGRFAM: Uncharacterised protein family UPF0114, bacteria; HAMAP: Uncharacterised protein family UPF0114, gammaproteobacteria; KEGG: spe:Spro_2386 hypothetical protein; PFAM: Uncharacterised protein family UPF0114, prokaryotic
YP_004500798.1	TIGRFAM: SelT/selW/selH selenoprotein; KEGG: ebi:EbC_37660 putative selenoprotein
YP_004500799.1	KEGG: spe:Spro_2392 PAS modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004500800.1	KEGG: spe:Spro_2393 inositol 2-dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal
YP_004500801.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: spe:Spro_2394 xylose isomerase domain-containing protein
YP_004500802.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_2395 periplasmic binding protein/LacI transcriptional regulator
YP_004500803.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pva:Pvag_3062 MFS family transporter
YP_004500804.1	KEGG: yen:YE4033 LysR family transcriptional regulator; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004500805.1	KEGG: spe:Spro_2396 dimethylargininase; PFAM: Amidinotransferase
YP_004500806.1	KEGG: spe:Spro_2397 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004500807.1	KEGG: spe:Spro_2398 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004500808.1	KEGG: spe:Spro_2399 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004500809.1	KEGG: spe:Spro_2400 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004500810.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: spe:Spro_2401 succinylglutamate desuccinylase/aspartoacylase
YP_004500811.1	PFAM: Filamentation induced by cAMP/death on curing, related
YP_004500813.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2402 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500815.1	KEGG: pam:PANA_0927 hypothetical protein
YP_004500816.1	PFAM: Uncharacterised conserved protein UCP012641; KEGG: mab:MAB_2856c hypothetical protein
YP_004500817.1	PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; KEGG: esa:ESA_01682 hypothetical protein
YP_004500818.1	PFAM: Aldehyde dehydrogenase; KEGG: spe:Spro_2410 aldehyde dehydrogenase
YP_004500819.1	KEGG: spe:Spro_2411 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004500820.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: swi:Swit_0153 TetR family transcriptional regulator
YP_004500821.1	PFAM: Alcohol dehydrogenase, zinc-binding; KEGG: bur:Bcep18194_B1574 zinc-containing alcohol dehydrogenase superfamily protein
YP_004500822.1	KEGG: spe:Spro_2412 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004500823.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: eca:ECA3634 LysR family transcriptional regulator
YP_004500824.1	manually curated
YP_004500825.1	KEGG: acd:AOLE_12945 MFS family transporter; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004500826.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; KEGG: spe:Spro_2414 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: Diguanylate cyclase, predicted; Diguanylate phosphodiesterase, predicted
YP_004500827.1	TIGRFAM: PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate related; KEGG: spe:Spro_2415 pyrrolo-quinoline quinone; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal
YP_004500828.1	PFAM: Peptidase S33, tripeptidyl-peptidase C-terminal; Alpha/beta hydrolase fold-1; KEGG: spe:Spro_2416 TAP domain-containing protein
YP_004500829.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2417 LysR family transcriptional regulator
YP_004500830.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_5503 short-chain dehydrogenase/reductase SDR
YP_004500831.1	KEGG: spe:Spro_2418 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase
YP_004500832.1	TIGRFAM: Diaminobutyrate-2-oxoglutarate transaminase; KEGG: pct:PC1_2060 2,4-diaminobutyrate 4-transaminase; PFAM: Aminotransferase class-III
YP_004500833.1	KEGG: mxa:MXAN_4523 putative lipoprotein
YP_004500837.1	KEGG: hoh:Hoch_6268 hypotheticalprotein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat
YP_004500838.1	KEGG: spe:Spro_2447 putative RNase H
YP_004500839.1	PFAM: MltA-interacting MipA; KEGG: spe:Spro_2730 MltA-interacting MipA family protein
YP_004500840.1	KEGG: rah:Rahaq_0871 outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004500841.1	KEGG: rah:Rahaq_0281 hypothetical protein
YP_004500842.1	KEGG: ent:Ent638_0039 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004500843.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: ent:Ent638_0038 phosphotransferase system, lactose/cellobiose-specific IIB subunit
YP_004500844.1	TIGRFAM: Phosphotransferase system, lactose/cellobiose IIC component; KEGG: enc:ECL_00049 PTS system lactose/cellobiose family IIC subunit; PFAM: Phosphotransferase system, EIIC
YP_004500845.1	KEGG: pao:Pat9b_4386 6-phospho-beta-glucosidase; PFAM: Glycoside hydrolase, family 1
YP_004500846.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIA subunit; KEGG: yen:YE1291 putative PTS system protein
YP_004500847.1	PFAM: Porin, LamB type; KEGG: cro:ROD_41141 putative maltoporin
YP_004500848.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ctu:Ctu_1p00190 hypothetical protein
YP_004500849.1	manually curated; KEGG: esa:ESA_pESA3p05449 hypothetical protein
YP_004500850.1	KEGG: enc:ECL_01758 acridine efflux pump; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004500851.1	KEGG: sml:Smlt4121 dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004500852.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: bgl:bglu_1g10580 2-oxoacid dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004500853.1	KEGG: bcj:BCAM1943 MarR family regulatory protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004500854.1	PFAM: FAD dependent oxidoreductase; KEGG: spe:Spro_2449 FAD dependent oxidoreductase
YP_004500855.1	PFAM: Helix-turn-helix, HxlR type; KEGG: bpy:Bphyt_2048 transcriptional regulator, HxlR family
YP_004500856.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bch:Bcen2424_3218 short-chain dehydrogenase/reductase SDR
YP_004500857.1	PFAM: YCII-related; KEGG: pst:PSPTO_4066 hypothetical protein
YP_004500858.1	PFAM: Helix-turn-helix, HxlR type; KEGG: ddd:Dda3937_01476 putative transcriptional regulator
YP_004500859.1	PFAM: Male sterility, NAD-binding; KEGG: kvu:EIO_2869 oxidoreductase YtfG
YP_004500860.1	manually curated; PFAM: HTH transcriptional regulator, MarR; KEGG: pwa:Pecwa_2559 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR
YP_004500861.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: pct:PC1_2255 hypothetical protein
YP_004500862.1	PFAM: Nitroreductase-like; KEGG: dac:Daci_3107 nitroreductase
YP_004500863.1	PFAM: Integrase, catalytic core; KEGG: kpe:KPK_B0045 transposase
YP_004500864.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: sro:Sros_3694 alpha/beta hydrolase fold protein
YP_004500865.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cko:CKO_00824 hypothetical protein
YP_004500866.1	KEGG: cko:CKO_00825 hypothetical protein
YP_004500867.1	PFAM: Amidohydrolase 2; KEGG: cai:Caci_6458 amidohydrolase 2
YP_004500868.1	PFAM: Methyltransferase type 11; KEGG: ent:Ent638_0824 methyltransferase type 11
YP_004500869.1	KEGG: spe:Spro_2452 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004500870.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: psa:PST_1624 transcriptional regulator
YP_004500871.1	KEGG: bxe:Bxe_B2110 NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold
YP_004500872.1	PFAM: Flavodoxin-like fold; KEGG: bbe:BBR47_31250 hypothetical protein
YP_004500873.1	PFAM: Helix-turn-helix, HxlR type; KEGG: acd:AOLE_01150 HxlR-like helix-turn-helix family protein
YP_004500874.1	KEGG: spe:Spro_2471 MarR family transcriptional regulator; PFAM: GCN5-related N-acetyltransferase; HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004500875.1	PFAM: Major facilitator superfamily MFS-1; KEGG: bcm:Bcenmc03_4887 major facilitator transporter
YP_004500876.1	KEGG: tau:Tola_1929 hypothetical protein
YP_004500877.1	KEGG: psb:Psyr_3799 hypothetical protein
YP_004500878.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: psb:Psyr_3801 regulatory protein, LysR:LysR, substrate-binding
YP_004500879.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bph:Bphy_5765 LysR family transcriptional regulator
YP_004500880.1	KEGG: spe:Spro_1853 hypothetical protein
YP_004500882.1	PFAM: Peptidase M10, serralysin, C-terminal; Peptidase M10A/M12B, matrixin/adamalysin; Haemolysin-type calcium-binding region; KEGG: spe:Spro_0210 serralysin; SMART: Peptidase, metallopeptidases
YP_004500883.1	PFAM: YheO-like; KEGG: pae:PA3864 transcriptional regulator of the dauBAR operon, DauR
YP_004500884.1	KEGG: spe:Spro_2473 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region
YP_004500885.1	KEGG: spe:Spro_2475 PfpI family intracellular peptidase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI
YP_004500886.1	PFAM: Protein of unknown function DUF1493; KEGG: spe:Spro_2476 hypothetical protein
YP_004500887.1	KEGG: spe:Spro_2477 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004500888.1	KEGG: spe:Spro_2478 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004500889.1	KEGG: spe:Spro_2479 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004500890.1	KEGG: spe:Spro_2480 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004500891.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2481 TetR family transcriptional regulator
YP_004500892.1	TIGRFAM: L-asparaginase, type II; KEGG: kva:Kvar_3192 L-asparaginase, type II; PFAM: Asparaginase/glutaminase
YP_004500893.1	KEGG: pfo:Pfl01_2316 benzoate membrane transport protein; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004500894.1	KEGG: pfo:Pfl01_2317 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004500895.1	KEGG: spe:Spro_2487 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004500896.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_2488 hypothetical protein
YP_004500897.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: psb:Psyr_3156 regulatory protein, LysR:LysR, substrate-binding
YP_004500899.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: pao:Pat9b_5473 acyl-CoA dehydrogenase type 2 domain-containing protein
YP_004500900.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: pao:Pat9b_5474 acyl-CoA dehydrogenase type 2 domain-containing protein
YP_004500901.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: ebi:EbC_20780 monooxygenase, DszA family
YP_004500902.1	PFAM: NLPA lipoprotein; KEGG: pao:Pat9b_5476 NlpA lipoprotein
YP_004500903.1	PFAM: ABC transporter-like; NIL domain; KEGG: pao:Pat9b_5477 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500904.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmy:Pmen_2366 binding-protein-dependent transport systems inner membrane component
YP_004500905.1	KEGG: ebi:EbC_20680 ABC-like transporter; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: Extracellular solute-binding protein, family 3
YP_004500906.1	TIGRFAM: Cysteine desulfurase, SufS; KEGG: spe:Spro_2493 SufS subfamily cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004500907.1	KEGG: spe:Spro_2494 hypothetical protein
YP_004500908.1	KEGG: spe:Spro_2495 serine O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat
YP_004500909.1	SMART: Rhodanese-like; KEGG: spe:Spro_2496 rhodanese domain-containing protein
YP_004500910.1	KEGG: spe:Spro_2497 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004500911.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2498 major facilitator transporter
YP_004500912.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: spe:Spro_2499 RpiR family transcriptional regulator
YP_004500913.1	KEGG: spe:Spro_2500 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 1
YP_004500915.1	TIGRFAM: Protocatechuate 3,4-dioxygenase, beta subunit; KEGG: spe:Spro_2501 protocatechuate 3,4-dioxygenase subunit beta; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal
YP_004500916.1	TIGRFAM: Protocatechuate 3,4-dioxygenase, alpha subunit; KEGG: spe:Spro_2502 protocatechuate 3,4-dioxygenase subunit alpha; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal
YP_004500917.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2503 LysR family transcriptional regulator
YP_004500918.1	TIGRFAM: 4-carboxymuconolactone decarboxylase; KEGG: spe:Spro_2504 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase
YP_004500919.1	TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; KEGG: spe:Spro_2505 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal
YP_004500920.1	KEGG: spe:Spro_2506 4-hydroxybenzoate 3-monooxygenase; PFAM: Monooxygenase, FAD-binding
YP_004500921.1	KEGG: spe:Spro_2507 benzoate transport; TIGRFAM: Benzoate transport; PFAM: Major facilitator superfamily MFS-1
YP_004500922.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2512 major facilitator transporter
YP_004500923.1	KEGG: bmn:BMA10247_A0893 shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004500924.1	KEGG: pam:PANA_3342 VllY; PFAM: Xylose isomerase, TIM barrel domain; Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004500925.1	KEGG: spe:Spro_2519 putative glycosyltransferase
YP_004500926.1	KEGG: spe:Spro_2520 L-lysine 6-monooxygenase (NADPH)
YP_004500928.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2513 TetR family transcriptional regulator
YP_004500929.1	TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: spe:Spro_2514 IclR family transcriptional regulator; SMART: Transcriptional regulator IclR, N-terminal
YP_004500930.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: D-serine ammonia-lyase; HAMAP: D-serine dehydratase; KEGG: spe:Spro_2515 D-serine dehydratase
YP_004500931.1	PFAM: Protein of unknown function DUF125, transmembrane; KEGG: esc:Entcl_2819 hypothetical protein
YP_004500932.1	PFAM: 3-demethylubiquinone-9 3-O-methyltransferase; KEGG: spe:Spro_2516 3-demethylubiquinone-9 3-methyltransferase
YP_004500933.1	PFAM: Protein of unknown function DUF1428; KEGG: spe:Spro_2517 hypothetical protein
YP_004500934.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spe:Spro_2518 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004500935.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01462 putative acetyltransferase protein
YP_004500936.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl01_2337 binding-protein dependent transport system inner membrane protein
YP_004500937.1	PFAM: ABC transporter-like; NIL domain; KEGG: ypb:YPTS_1446 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500938.1	PFAM: NLPA lipoprotein; KEGG: yen:YE1466 hypothetical protein
YP_004500939.1	KEGG: pct:PC1_2718 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004500940.1	KEGG: yen:YE2604 putative oxidoreductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004500941.1	PFAM: Carbohydrate/purine kinase; KEGG: pct:PC1_2720 PfkB domain protein
YP_004500942.1	PFAM: Bacterial inner-membrane translocator; KEGG: yen:YE2606 putative sugar permease
YP_004500943.1	PFAM: Bacterial inner-membrane translocator; KEGG: yen:YE2607 putative membrane permease protein
YP_004500944.1	PFAM: ABC transporter-like; KEGG: yen:YE2608 putative sugar transport, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004500945.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2609 ABC transporter, substrate binding component
YP_004500946.1	PFAM: Glycosyl hydrolase, family 13, catalytic region; KEGG: spe:Spro_2521 alpha amylase catalytic region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004500947.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_2522 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500948.1	KEGG: spe:Spro_2523 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 4
YP_004500949.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2524 binding-protein-dependent transport systems inner membrane component
YP_004500950.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2525 binding-protein-dependent transport systems inner membrane component
YP_004500951.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_2526 extracellular solute-binding protein
YP_004500952.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2527 LysR family transcriptional regulator
YP_004500953.1	PFAM: Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: rah:Rahaq_2687 PTS system, glucose-specific IIABC component
YP_004500955.1	PFAM: Mechanosensitive ion channel MscS; KEGG: spe:Spro_2528 mechanosensitive ion channel MscS
YP_004500956.1	KEGG: spe:Spro_2529 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004500957.1	PFAM: Cupin 2, conserved barrel; KEGG: kpn:KPN_01138 hypothetical protein
YP_004500958.1	KEGG: kva:Kvar_3242 AraC protein arabinose-binding/dimerization; PFAM: AraC protein, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC domain
YP_004500959.1	PFAM: Peptidase M24, structural domain; Creatinase; KEGG: spe:Spro_3031 peptidase M24
YP_004500960.1	KEGG: spe:Spro_2530 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004500963.1	PFAM: MgtE integral membrane region; Cystathionine beta-synthase, core; KEGG: spe:Spro_2531 MgtE integral membrane region
YP_004500964.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ent:Ent638_1483 extracellular solute-binding protein
YP_004500965.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sro:Sros_8805 hypothetical protein
YP_004500966.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rah:Rahaq_3119 LysR family transcriptional regulator
YP_004500967.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_2534 extracellular solute-binding protein
YP_004500968.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2535 binding-protein-dependent transport systems inner membrane component
YP_004500969.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_2536 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500970.1	KEGG: spe:Spro_2537 translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004500971.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_2538 hypothetical protein
YP_004500972.1	PFAM: Protein of unknown function DUF2239; KEGG: gdj:Gdia_2823 hypothetical protein
YP_004500973.1	KEGG: vap:Vapar_2886 ArsR family transcriptional regulator
YP_004500974.1	KEGG: vpe:Varpa_3121 transcriptional regulator AsnC family
YP_004500975.1	KEGG: spe:Spro_2540 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004500976.1	KEGG: spe:Spro_2541 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004500977.1	KEGG: spe:Spro_2542 alpha/beta hydrolase domain-containing protein
YP_004500978.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_2543 alpha/beta hydrolase fold domain-containing protein
YP_004500979.1	PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: spe:Spro_2544 xylose isomerase domain-containing protein
YP_004500980.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2545 TetR family transcriptional regulator
YP_004500981.1	PFAM: Cupin 2, conserved barrel; KEGG: spe:Spro_2546 cupin 2 domain-containing protein
YP_004500982.1	KEGG: spe:Spro_2547 K potassium transporter; HAMAP: Low affinity potassium transport system protein kup; PFAM: K+ potassium transporter
YP_004500983.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2548 LysR family transcriptional regulator
YP_004500984.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_2549 inner-membrane translocator
YP_004500985.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_2550 inner-membrane translocator
YP_004500986.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2551 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004500987.1	KEGG: spe:Spro_2552 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004500988.1	PFAM: Extracellular ligand-binding receptor; KEGG: spe:Spro_2553 extracellular ligand-binding receptor
YP_004500989.1	KEGG: spe:Spro_2554 hypothetical protein
YP_004500990.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: spe:Spro_2555 amidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004500991.1	KEGG: spe:Spro_2556 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004500992.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: spe:Spro_2557 activator of HSP90 ATPase 1 family protein
YP_004500993.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: spe:Spro_2558 Mg2 transporter protein CorA family protein
YP_004500994.1	PFAM: Phosphate transporter; KEGG: spe:Spro_2559 phosphate transporter
YP_004500995.1	KEGG: spe:Spro_2560 hypothetical protein; TIGRFAM: polyphosphate kinase 2; PFAM: Polyphosphate kinase 2
YP_004500996.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; KEGG: spe:Spro_2561 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_004500997.1	KEGG: spe:Spro_2562 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup
YP_004500998.1	KEGG: spe:Spro_2563 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004500999.1	KEGG: spe:Spro_2564 hypothetical protein
YP_004501000.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: spe:Spro_2565 glutamine amidotransferase class-I
YP_004501001.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase; KEGG: spe:Spro_2566 pyridoxal kinase; PFAM: Carbohydrate/purine kinase
YP_004501002.1	PFAM: Type IV pilus assembly PilZ; YcgR; KEGG: spe:Spro_2567 YcgR family protein
YP_004501003.1	PFAM: N-formylglutamate amidohydrolase; KEGG: spe:Spro_2568 N-formylglutamate amidohydrolase
YP_004501004.1	KEGG: spe:Spro_2569 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004501005.1	KEGG: spe:Spro_2580 hypothetical protein
YP_004501006.1	KEGG: spe:Spro_2581 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Methylguanine DNA methyltransferase, ribonuclease-like
YP_004501007.1	KEGG: spe:Spro_2582 fumarate/nitrate reduction transcriptional regulator; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004501008.1	PFAM: UspA; KEGG: spe:Spro_2583 universal stress protein UspE
YP_004501009.1	KEGG: spe:Spro_2584 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase, beta subunit
YP_004501010.1	KEGG: spe:Spro_2585 NAD(P) transhydrogenase subunit alpha; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal
YP_004501011.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_2586 hypothetical protein
YP_004501012.1	KEGG: spe:Spro_2587 arginine/ornithine antiporter; TIGRFAM: Arginine/ornithine antiporter; PFAM: Amino acid permease-associated region
YP_004501013.1	KEGG: spe:Spro_2588 hypothetical protein
YP_004501014.1	KEGG: spe:Spro_2589 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501015.1	KEGG: spe:Spro_2590 DNA-binding transcriptional regulator RstA; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004501016.1	KEGG: spe:Spro_2591 sensor protein RstB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004501017.1	KEGG: spe:Spro_2592 carboxypeptidase Taq; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase
YP_004501018.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: mtc:MT0674 carboxyl esterase
YP_004501019.1	KEGG: spe:Spro_2593 acid shock-inducible periplasmic protein; HAMAP: Acid shock protein; PFAM: Acid shock
YP_004501020.1	KEGG: spe:Spro_2594 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: Peptidase S1/S6, chymotrypsin/Hap
YP_004501021.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG: spe:Spro_2595 ATP-dependent RNA helicase HrpA; SMART: DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal
YP_004501022.1	KEGG: spe:Spro_2596 azoreductase; HAMAP: FMN-dependent NADH-azoreductase; PFAM: Flavodoxin-like fold
YP_004501023.1	PFAM: Uncharacterised conserved protein UCP025560; KEGG: spe:Spro_2597 hypothetical protein
YP_004501024.1	KEGG: spe:Spro_2598 hypothetical protein
YP_004501025.1	KEGG: spe:Spro_2599 hypothetical protein
YP_004501026.1	KEGG: spe:Spro_2600 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004501027.1	PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: spe:Spro_2601 heat-inducible protein
YP_004501028.1	PFAM: Protein of unknown function DUF333; KEGG: spe:Spro_2602 putative lipoprotein
YP_004501029.1	PFAM: Small multidrug resistance protein; KEGG: spe:Spro_2603 small multidrug resistance protein
YP_004501030.1	TIGRFAM: Pyruvate-flavodoxin oxidoreductase; KEGG: spe:Spro_2604 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004501031.1	KEGG: yen:YE2857 hypothetical protein
YP_004501032.1	KEGG: pva:Pvag_pPag30503 HTH-type transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004501033.1	PFAM: B3/B4 tRNA-binding domain; KEGG: pva:Pvag_pPag30504 hypothetical protein
YP_004501034.1	KEGG: spe:Spro_2607 C32 tRNA thiolase; HAMAP: tRNA 2-thiocytidine biosynthesis protein TtcA; PFAM: PP-loop
YP_004501035.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_2608 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004501036.1	KEGG: spe:Spro_2609 zinc transporter; HAMAP: Zinc transport protein zntB; PFAM: Mg2+ transporter protein, CorA-like
YP_004501037.1	KEGG: spe:Spro_2610 hypothetical protein
YP_004501038.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2611 extracellular solute-binding protein
YP_004501039.1	KEGG: spe:Spro_2612 hypothetical protein
YP_004501040.1	PFAM: Peptidase M14, carboxypeptidase A; KEGG: spe:Spro_2614 murein peptide amidase A
YP_004501041.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: spe:Spro_2615 mandelate racemase/muconate lactonizing protein
YP_004501042.1	KEGG: spe:Spro_2616 thiol peroxidase; HAMAP: thiol peroxidase; PFAM: Redoxin
YP_004501043.1	KEGG: spe:Spro_2617 DNA-binding transcriptional regulator TyrR; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; Amino acid-binding ACT; SMART: PAS; ATPase, AAA+ type, core
YP_004501044.1	TIGRFAM: Conserved hypothetical protein CHP01620; HAMAP: UPF0283 membrane protein ycjF; KEGG: spe:Spro_2618 hypothetical protein; PFAM: Conserved hypothetical protein CHP01620
YP_004501045.1	PFAM: Protein of unknown function DUF463, YcjX-like protein; KEGG: spe:Spro_2619 hypothetical protein
YP_004501046.1	KEGG: spe:Spro_2620 hypothetical protein
YP_004501047.1	manually curated; TIGRFAM: Phage shock protein PspD; KEGG: spe:Spro_2621 peripheral inner membrane phage-shock protein; PFAM: Phage shock protein PspD
YP_004501048.1	KEGG: spe:Spro_2622 DNA-binding transcriptional activator PspC; TIGRFAM: Phage shock protein C; PFAM: PspC
YP_004501049.1	KEGG: spe:Spro_2623 phage shock protein B; TIGRFAM: Phage shock B; PFAM: Phage shock B
YP_004501050.1	KEGG: spe:Spro_2624 phage shock protein PspA; TIGRFAM: Phage shock protein A; PFAM: PspA/IM30
YP_004501051.1	TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: spe:Spro_2625 phage shock protein operon transcriptional activator; SMART: ATPase, AAA+ type, core
YP_004501052.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K
YP_004501053.1	KEGG: spe:Spro_2627 carbonic anhydrase-like protein
YP_004501054.1	KEGG: spe:Spro_2628 putative GTP cyclohydrolase; PFAM: Protein of unknown function DUF198
YP_004501055.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2629 extracellular solute-binding protein
YP_004501056.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2630 binding-protein-dependent transport systems inner membrane component
YP_004501057.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2631 binding-protein-dependent transport systems inner membrane component
YP_004501058.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2632 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004501059.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2633 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501060.1	KEGG: spe:Spro_2634 peroxidase-like protein; TIGRFAM: Uncharacterised peroxidase-related; PFAM: Carboxymuconolactone decarboxylase
YP_004501061.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2635 LysR family transcriptional regulator
YP_004501062.1	KEGG: spe:Spro_2636 D-alanyl-D-alanine carboxypeptidase; PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004501063.1	TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; KEGG: spe:Spro_2637 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase
YP_004501064.1	SMART: Cold shock protein; TIGRFAM: Ribonuclease II, bacterial; Ribonuclease II/ribonuclease R, bacteria; KEGG: spe:Spro_2638 exoribonuclease II; HAMAP: Exoribonuclease 2; PFAM: Ribonuclease II/R; Ribonuclease B, OB region N-terminal; Ribosomal protein S1, RNA binding domain
YP_004501065.1	PFAM: Carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA
YP_004501066.1	TIGRFAM: Transaldolase C; KEGG: spe:Spro_2640 fructose-6-phosphate aldolase; PFAM: Transaldolase
YP_004501067.1	KEGG: spe:Spro_2643 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004501068.1	TIGRFAM: L-ribulose-5-phosphate 4-epimerase; KEGG: spe:Spro_2644 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal
YP_004501069.1	KEGG: spe:Spro_2645 lipoprotein
YP_004501070.1	KEGG: spe:Spro_2646 translation initiation factor SUI1; TIGRFAM: Archaeal/bacterial translation initiation factor SUI1; PFAM: Translation initiation factor SUI1
YP_004501071.1	TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; KEGG: spe:Spro_2647 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core
YP_004501072.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_2648 hypothetical protein
YP_004501073.1	KEGG: spe:Spro_2649 hypothetical protein
YP_004501074.1	KEGG: spe:Spro_2650 tetratricopeptide repeat-containing protein
YP_004501075.1	PFAM: Protein of unknown function DUF1049; KEGG: spe:Spro_2651 hypothetical protein
YP_004501076.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: spe:Spro_2652 phosphatidylglycerophosphatase B; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004501077.1	PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; HAMAP: GTP cyclohydrolase-2; KEGG: spe:Spro_2653 GTP cyclohydrolase II
YP_004501078.1	TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: spe:Spro_2654 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004501079.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2656 transcriptional regulator CysB
YP_004501080.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: spe:Spro_2657 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger; DNA topoisomerase I, zinc ribbon-like, bacterial-type
YP_004501081.1	PFAM: Protein of unknown function DUF2498; KEGG: spe:Spro_2658 hypothetical protein
YP_004501082.1	PFAM: Peptidase S49, N-terminal proteobacteria; Peptidase S49; KEGG: spe:Spro_2659 putative periplasmic protease
YP_004501083.1	KEGG: spe:Spro_2660 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501084.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: spe:Spro_2661 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR
YP_004501085.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_2662 23S rRNA pseudouridylate synthase B; SMART: RNA-binding S4
YP_004501086.1	KEGG: spe:Spro_2663 putative dioxygenase
YP_004501087.1	KEGG: spe:Spro_2664 hypothetical protein
YP_004501088.1	KEGG: spe:Spro_2665 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004501089.1	KEGG: spe:Spro_2666 phosphotransferase domain-containing protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004501090.1	TIGRFAM: Anthranilate synthase component I, TrpE; KEGG: spe:Spro_2667 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004501091.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: spe:Spro_2668 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004501092.1	PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; TIGRFAM: Anthranilate phosphoribosyl transferase; HAMAP: Anthranilate phosphoribosyl transferase; KEGG: spe:Spro_2669 anthranilate phosphoribosyltransferase
YP_004501093.1	KEGG: spe:Spro_2670 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004501094.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; TIGRFAM: Tryptophan synthase, beta chain; HAMAP: Tryptophan synthase beta chain; KEGG: spe:Spro_2671 tryptophan synthase subunit beta
YP_004501095.1	PFAM: Tryptophan synthase, alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; HAMAP: Tryptophan synthase, alpha chain; KEGG: spe:Spro_2672 tryptophan synthase subunit alpha
YP_004501096.1	KEGG: spe:Spro_2673 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004501097.1	PFAM: Outer membrane protein, OmpW; KEGG: spe:Spro_2674 outer membrane protein W
YP_004501098.1	PFAM: Uncharacterised protein family UPF0153; KEGG: rah:Rahaq_2625 hypothetical protein
YP_004501099.1	KEGG: spe:Spro_2675 hypothetical protein; HAMAP: UPF0259 membrane protein yciC; PFAM: Uncharacterised protein family UPF0259
YP_004501100.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_2676 sulfate transporter
YP_004501101.1	TIGRFAM: Intracellular septation protein A; HAMAP: Intracellular septation protein A; KEGG: spe:Spro_2677 intracellular septation protein A; PFAM: Intracellular septation protein A
YP_004501102.1	PFAM: Thioesterase superfamily; KEGG: spe:Spro_2678 acyl-CoA thioester hydrolase
YP_004501103.1	KEGG: spe:Spro_2682 transport protein TonB; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein
YP_004501104.1	PFAM: Protein of unknown function DUF208; KEGG: spe:Spro_2683 hypothetical protein
YP_004501105.1	PFAM: YCII-related; KEGG: spe:Spro_2684 YCII-like protein
YP_004501106.1	PFAM: Phage P22 tailspike protein, head-binding; KEGG: eck:EC55989_2595 hypothetical protein; putative head-binding domain
YP_004501107.1	KEGG: kpe:KPK_4121 regulatory protein Mnt
YP_004501108.1	manually curated; KEGG: nit:NAL212_0856 hypothetical protein
YP_004501109.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: sfx:S0248 putative DNA transfer protein
YP_004501110.1	KEGG: sfv:SFV_0229 putative prophage DNA injection protein
YP_004501111.1	KEGG: efe:EFER_2036 DNA transfer protein gp7 from phage origin
YP_004501112.1	KEGG: efe:EFER_2037 hypothetical protein
YP_004501113.1	KEGG: ses:SARI_02643 hypothetical protein
YP_004501114.1	KEGG: seh:SeHA_C0406 packaged DNA stabilization protein GP10
YP_004501115.1	KEGG: sfv:SFV_0224 putative DNA stabilization protein
YP_004501116.1	KEGG: efe:EFER_2041 hypothetical protein
YP_004501117.1	KEGG: sfv:SFV_0222 putative coat protein
YP_004501118.1	KEGG: seh:SeHA_C0402 scaffolding protein
YP_004501119.1	KEGG: efe:EFER_2044 portal protein (protein gp1)
YP_004501120.1	KEGG: sek:SSPA2233a terminase large subunit
YP_004501121.1	PFAM: Terminase small subunit; KEGG: ypy:YPK_1220 terminase small subunit
YP_004501122.1	KEGG: ppp:PHYPADRAFT_103959 hypothetical protein
YP_004501123.1	KEGG: sec:SC0353 hypothetical protein
YP_004501126.1	PFAM: Bacteriophage lysis protein; KEGG: ent:Ent638_2608 bacteriophage lysis protein
YP_004501127.1	KEGG: sew:SeSA_A2272 lytic enzyme
YP_004501128.1	KEGG: epy:EpC_20600 phage holin, lambda family; TIGRFAM: Holin, phage lambda; PFAM: Holin, phage lambda
YP_004501129.1	PFAM: Phage antitermination Q-like; KEGG: ypy:YPK_1214 hypothetical protein
YP_004501130.1	PFAM: Virulence-associated E; KEGG: ecr:ECIAI1_2654 conserved hypothetical protein; putative virulence-associated protein E
YP_004501131.1	KEGG: hde:HDEF_1664 APSE-2 prophage: cro
YP_004501132.1	KEGG: eoh:ECO103_3126 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3
YP_004501134.1	KEGG: bac:BamMC406_6704 hypothetical protein
YP_004501136.1	KEGG: sed:SeD_A1098 hypothetical protein
YP_004501138.1	KEGG: ses:SARI_02673 hypothetical protein
YP_004501139.1	KEGG: ypy:YPK_1209 hypothetical protein
YP_004501140.1	KEGG: ypy:YPK_1208 hypothetical protein
YP_004501141.1	KEGG: ypy:YPK_1207 hypothetical protein
YP_004501143.1	SMART: DNA-directed DNA polymerase, family A, palm domain; KEGG: ecr:ECIAI1_2664 putative DNA polymerase from bacteriophage origin
YP_004501144.1	KEGG: sfv:SFV_1903 hypothetical protein
YP_004501145.1	PFAM: VRR-NUC; KEGG: ecr:ECIAI1_2667 hypothetical protein
YP_004501147.1	SMART: DEAD-like helicase, N-terminal; KEGG: eok:G2583_3139 superfamily II DNA/RNA helicases, SNF2 family
YP_004501148.1	KEGG: pao:Pat9b_2166 excisionase
YP_004501149.1	PFAM: Integrase, catalytic core, phage; KEGG: ecd:ECDH10B_1313 integrase
YP_004501150.1	manually curated; KEGG: yen:YE1910 hypothetical protein
YP_004501151.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_2686 TetR family transcriptional regulator
YP_004501152.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_2687 major facilitator transporter
YP_004501153.1	manually curated; KEGG: ddc:Dd586_2135 hypothetical protein
YP_004501154.1	HAMAP: Cardiolipin synthase; PFAM: Phospholipase D/Transphosphatidylase; KEGG: spe:Spro_2689 cardiolipin synthetase; SMART: Phospholipase D/Transphosphatidylase
YP_004501155.1	PFAM: dsDNA mimic, putative; KEGG: spe:Spro_2690 dsDNA-mimic protein
YP_004501156.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2697 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004501157.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2698 oligopeptide transporter ATP-binding protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004501158.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2699 binding-protein-dependent transport systems inner membrane component
YP_004501159.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2700 oligopeptide transporter permease
YP_004501160.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor
YP_004501161.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2702 extracellular solute-binding protein
YP_004501162.1	KEGG: spe:Spro_2703 hypothetical protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004501163.1	KEGG: spe:Spro_2704 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase
YP_004501164.1	HAMAP: Thymidine kinase, subgroup; KEGG: spe:Spro_2705 thymidine kinase; PFAM: Thymidine kinase
YP_004501165.1	KEGG: spe:Spro_2706 global DNA-binding transcriptional dual regulator H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004501167.1	KEGG: spe:Spro_2707 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004501168.1	TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: spe:Spro_2708 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal
YP_004501169.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: spe:Spro_2709 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; PFAM: Nucleotidyl transferase
YP_004501170.1	KEGG: spe:Spro_2710 response regulator of RpoS; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004501171.1	PFAM: Patatin; KEGG: spe:Spro_2711 hypothetical protein
YP_004501172.1	manually curated; HAMAP: UPF0225 protein ychJ; KEGG: spe:Spro_2712 hypothetical protein; PFAM: SEC-C motif
YP_004501173.1	TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: spe:Spro_2713 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT
YP_004501174.1	KEGG: spe:Spro_2714 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00730; PFAM: Conserved hypothetical protein CHP00730
YP_004501175.1	TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: spe:Spro_2715 exonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004501176.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_2716 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase
YP_004501177.1	PFAM: Protein of unknown function DUF1496; KEGG: spe:Spro_2717 hypothetical protein
YP_004501178.1	SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: spe:Spro_2718 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain
YP_004501179.1	TIGRFAM: tRNA 2-selenouridine synthase; HAMAP: tRNA 2-selenouridine synthase; KEGG: spe:Spro_2719 tRNA 2-selenouridine synthase; SMART: Rhodanese-like
YP_004501180.1	TIGRFAM: Selenide water dikinase; HAMAP: Selenide, water dikinase; KEGG: spe:Spro_2720 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004501181.1	PFAM: Nitroreductase-like; KEGG: spe:Spro_2721 hypothetical protein
YP_004501182.1	KEGG: spe:Spro_2722 protease 4; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA; PFAM: Peptidase S49
YP_004501183.1	TIGRFAM: L-asparaginase, type I; KEGG: spe:Spro_2723 cytoplasmic asparaginase I; PFAM: Asparaginase/glutaminase
YP_004501184.1	KEGG: spe:Spro_2724 nicotinamidase/pyrazinamidase; PFAM: Isochorismatase-like
YP_004501185.1	PFAM: Glycoside hydrolase, family 18, catalytic domain; KEGG: spe:Spro_2725 glycoside hydrolase family protein; SMART: Chitinase II
YP_004501186.1	PFAM: Protein of unknown function DUF1315; KEGG: spe:Spro_2726 hypothetical protein
YP_004501187.1	PFAM: Methionine sulphoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB; KEGG: spe:Spro_2727 methionine sulfoxide reductase B
YP_004501188.1	TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ent:Ent638_1675 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004501189.1	PFAM: Aldose 1-epimerase; KEGG: spe:Spro_2729 aldose 1-epimerase
YP_004501190.1	PFAM: MltA-interacting MipA; KEGG: spe:Spro_2730 MltA-interacting MipA family protein
YP_004501192.1	KEGG: spe:Spro_2731 putative serine protein kinase, PrkA; PFAM: PrkA AAA; PrkA serine kinase; SMART: PrkA AAA
YP_004501193.1	KEGG: spe:Spro_2732 hypothetical protein; HAMAP: UPF0229 protein yeaH; PFAM: Protein of unknown function DUF444
YP_004501194.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pen:PSEEN1830 acetyltransferase
YP_004501195.1	PFAM: ThiJ/PfpI; KEGG: pfl:PFL_3588 ThiJ/PfpI family protein
YP_004501196.1	PFAM: Uncharacterised protein family UPF0057; KEGG: spe:Spro_2734 hypothetical protein
YP_004501197.1	PFAM: Protein of unknown function DUF2566; KEGG: spe:Spro_2735 hypothetical protein
YP_004501198.1	KEGG: spe:Spro_2736 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004501199.1	KEGG: spe:Spro_2738 hypothetical protein
YP_004501201.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: spe:Spro_2739 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501202.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2740 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501203.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2741 extracellular solute-binding protein
YP_004501204.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2742 binding-protein-dependent transport systems inner membrane component
YP_004501205.1	KEGG: spe:Spro_2743 endodeoxyribonuclease
YP_004501206.1	KEGG: spe:Spro_2744 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004501207.1	PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: spe:Spro_2745 alanine racemase
YP_004501208.1	HAMAP: D-amino acid dehydrogenase small subunit; KEGG: spe:Spro_2746 D-amino acid dehydrogenase small subunit; PFAM: FAD dependent oxidoreductase
YP_004501210.1	KEGG: rah:Rahaq_5015 hypothetical protein
YP_004501211.1	KEGG: pay:PAU_01648 tail fiber protein
YP_004501212.1	KEGG: plu:plu3026 hypothetical protein
YP_004501213.1	KEGG: pay:PAU_01576 bacteriophage protein
YP_004501214.1	KEGG: bmj:BMULJ_01435 putative bacteriophage protein
YP_004501215.1	KEGG: sec:SC2587 putative bacteriophage protein
YP_004501217.1	manually curated; KEGG: spq:SPAB_02219 hypothetical protein
YP_004501218.1	KEGG: spq:SPAB_02220 hypothetical protein
YP_004501219.1	KEGG: spq:SPAB_02221 hypothetical protein
YP_004501220.1	KEGG: sty:STY1062 bacteriophage protein
YP_004501221.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: spq:SPAB_02223 hypothetical protein
YP_004501222.1	KEGG: ent:Ent638_0808 putative bacteriophage protein
YP_004501223.1	KEGG: pay:PAU_01568 bacteriophage protein
YP_004501224.1	KEGG: ctu:Ctu_34230 hypothetical protein
YP_004501225.1	KEGG: rah:Rahaq_5001 bacteriophage protein
YP_004501226.1	KEGG: rah:Rahaq_5000 hypothetical protein
YP_004501227.1	KEGG: rah:Rahaq_4999 hypothetical protein
YP_004501228.1	KEGG: sec:SC2603 putative bacteriophage protein
YP_004501229.1	KEGG: sty:STY1053 bacteriophage protein
YP_004501230.1	PFAM: Protein of unknown function DUF2184; KEGG: spq:SPAB_02232 hypothetical protein
YP_004501231.1	KEGG: eok:G2583_3117 putative bacteriophage protein
YP_004501232.1	PFAM: Protein of unknown function DUF2213; KEGG: see:SNSL254_A1157 hypothetical protein
YP_004501233.1	manually curated; KEGG: ent:Ent638_0801 putative bacteriophage protein
YP_004501234.1	KEGG: ecr:ECIAI1_2646 hypothetical protein; TIGRFAM: Phage-related protein HI1409; PFAM: Protein of unknown function DUF2212; Phage-related protein, HI1409, conserved region
YP_004501235.1	KEGG: see:SNSL254_A1154 GP33 TerL
YP_004501237.1	KEGG: ypi:YpsIP31758_2228 hypothetical protein
YP_004501238.1	KEGG: cvi:CV_2285 hypothetical protein
YP_004501239.1	KEGG: spe:Spro_3473 hypothetical protein
YP_004501240.1	KEGG: epy:EpC_17590 lytic enzyme
YP_004501241.1	KEGG: epy:EpC_17580 similar to phage lysis protein S; TIGRFAM: Holin, phage lambda; PFAM: Holin, phage lambda
YP_004501242.1	KEGG: sbp:Sbal223_4362 hypothetical protein
YP_004501243.1	PFAM: Phage antitermination Q-like; KEGG: yen:YE2336 putative late gene antiterminator protein
YP_004501244.1	KEGG: epy:EpC_17560 conserved bacteriophage protein; manually curated; PFAM: Protein of unknown function DUF1364
YP_004501245.1	PFAM: Protein of unknown function DUF1367; KEGG: see:SNSL254_A1146 gifsy-2 prophage protein
YP_004501246.1	PFAM: Protein of unknown function DUF2513; KEGG: ecl:EcolC_2886 hypothetical protein
YP_004501247.1	PFAM: DNA methylase, C-5 cytosine-specific; KEGG: rah:Rahaq_1788 C-5 cytosine-specific DNA methylase
YP_004501248.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: eic:NT01EI_3149 DNA adenine methyltransferase
YP_004501250.1	KEGG: see:SNSL254_A1142 hypothetical protein
YP_004501251.1	KEGG: rah:Rahaq_4968 hypothetical protein
YP_004501252.1	KEGG: ypi:YpsIP31758_2244 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; SMART: ATPase, AAA+ type, core
YP_004501253.1	PFAM: Phage replication protein O, N-terminal; KEGG: sgl:SG1144 hypothetical protein
YP_004501254.1	KEGG: ecy:ECSE_2252 hypothetical protein
YP_004501255.1	PFAM: Protein of unknown function DUF1019; KEGG: ypi:YpsIP31758_2246 hypothetical protein
YP_004501256.1	manually curated; PFAM: Helix-turn-helix type 3; KEGG: ecl:EcolC_2058 transcriptional repressor DicA; SMART: Helix-turn-helix type 3
YP_004501258.1	KEGG: see:SNSL254_A1135 hypothetical protein
YP_004501260.1	KEGG: see:SNSL254_A1133 hypothetical protein
YP_004501261.1	PFAM: Siphovirus Gp157; KEGG: see:SNSL254_A1132 hypothetical protein
YP_004501262.1	KEGG: ecy:ECSE_2259 hypothetical protein
YP_004501263.1	KEGG: plu:plu3485 hypothetical protein
YP_004501264.1	PFAM: Excisionase-like; KEGG: eoi:ECO111_2979 putative excisionase
YP_004501265.1	PFAM: Integrase, lambda-type, N-terminal DNA-binding; Integrase, N-terminal SAM-like, phage; Integrase, catalytic core, phage; KEGG: ecg:E2348C_0979 predicted integrase
YP_004501266.1	PFAM: Sporulation stage V, protein R; KEGG: spe:Spro_2747 SpoVR family protein
YP_004501267.1	SMART: HTH transcriptional regulator, GntR; TIGRFAM: Fatty acid response transcription factor FadR; KEGG: spe:Spro_2748 fatty acid metabolism regulator; HAMAP: Fatty acid metabolism regulator protein; PFAM: Fatty acid responsive transcription factor FadR, C-terminal; HTH transcriptional regulator, GntR
YP_004501268.1	TIGRFAM: Na+/H+ antiporter NhaB; HAMAP: Na+/H+ antiporter NhaB; KEGG: spe:Spro_2749 sodium/proton antiporter; PFAM: Na+/H+ antiporter NhaB
YP_004501269.1	KEGG: spe:Spro_2750 disulfide bond formation protein B; HAMAP: Disulfide bond formation protein B; PFAM: Disulphide bond formation protein DsbB
YP_004501270.1	KEGG: spe:Spro_2751 hypothetical protein; HAMAP: Uncharacterised conserved protein UCP006173; PFAM: Uncharacterised protein family UPF0153
YP_004501271.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: spe:Spro_2752 hypothetical protein
YP_004501272.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: spe:Spro_2753 hypothetical protein
YP_004501273.1	TIGRFAM: Lytic murein transglycosylase; KEGG: spe:Spro_2754 lytic murein transglycosylase
YP_004501274.1	KEGG: spe:Spro_2755 hypothetical protein; HAMAP: YcgL domain; PFAM: YcgL domain
YP_004501275.1	TIGRFAM: Septum formation inhibitor MinC; HAMAP: Septum formation inhibitor MinC; KEGG: spe:Spro_2756 septum formation inhibitor; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal
YP_004501276.1	KEGG: spe:Spro_2757 cell division inhibitor MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004501277.1	TIGRFAM: Septum formation topological specificity factor MinE; HAMAP: Septum formation topological specificity factor MinE; KEGG: yen:YE2373 cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_004501278.1	SMART: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain; TIGRFAM: Ribonuclease D; KEGG: spe:Spro_2759 ribonuclease D; PFAM: 3'-5' exonuclease; Helicase/RNase D C-terminal, HRDC domain
YP_004501279.1	KEGG: spe:Spro_2760 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004501280.1	KEGG: spe:Spro_2761 Slp family outer membrane lipoprotein; TIGRFAM: Outer membrane lipoprotein Slp; PFAM: Outer membrane lipoprotein Slp
YP_004501281.1	KEGG: spe:Spro_2762 peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; PFAM: Peptidase M22, glycoprotease
YP_004501282.1	SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: spe:Spro_2763 helicase C2
YP_004501283.1	PFAM: Endoribonuclease L-PSP; KEGG: spe:Spro_2764 endoribonuclease L-PSP
YP_004501284.1	KEGG: spe:Spro_2765 multidrug efflux system protein MdtI; HAMAP: Spermidine export protein mdtI; PFAM: Small multidrug resistance protein
YP_004501285.1	KEGG: spe:Spro_2766 small multidrug resistance protein; HAMAP: Spermidine export protein mdtJ; PFAM: Small multidrug resistance protein
YP_004501286.1	TIGRFAM: KDPG/KHG aldolase; KEGG: spe:Spro_2767 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG/KHG aldolase
YP_004501287.1	TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: spe:Spro_2768 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase
YP_004501288.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: spe:Spro_2769 DNA-binding transcriptional regulator HexR
YP_004501289.1	TIGRFAM: Pyruvate kinase; KEGG: spe:Spro_2770 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta
YP_004501290.1	KEGG: lsp:Bsph_2663 protein lap4 (protein scribble) (protein smell-impaired)
YP_004501291.1	KEGG: spe:Spro_2771 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004501292.1	KEGG: spe:Spro_2772 hypothetical protein; PFAM: Peptidase M23; Opacity-associated protein A, N-terminal; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004501293.1	PFAM: ABC transporter metal-binding lipoprotein; KEGG: spe:Spro_2773 high-affinity zinc transporter periplasmic component
YP_004501294.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2774 high-affinity zinc transporter ATPase; SMART: ATPase, AAA+ type, core
YP_004501295.1	PFAM: ABC-3; KEGG: spe:Spro_2775 high-affinity zinc transporter membrane protein
YP_004501296.1	SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: spe:Spro_2776 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal
YP_004501297.1	SMART: Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Bacterial DNA recombination protein RuvA; KEGG: spe:Spro_2777 Holliday junction DNA helicase RuvA; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal
YP_004501298.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; HAMAP: Crossover junction endodeoxyribonuclease RuvC; KEGG: spe:Spro_2778 Holliday junction resolvase
YP_004501299.1	KEGG: spe:Spro_2779 hypothetical protein; TIGRFAM: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28
YP_004501300.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_2780 NUDIX hydrolase
YP_004501301.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: spe:Spro_2781 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain
YP_004501302.1	manually curated; TIGRFAM: Regulatory protein, FmdB, putative; KEGG: spe:Spro_2782 FmdB family regulatory protein; PFAM: Regulatory protein, FmdB, putative
YP_004501303.1	PFAM: Isochorismatase-like; KEGG: spe:Spro_2783 hypothetical protein
YP_004501304.1	PFAM: Protein of unknown function DUF72; KEGG: spe:Spro_2784 hypothetical protein
YP_004501305.1	KEGG: spe:Spro_2785 hypothetical protein
YP_004501306.1	TIGRFAM: tRNA (cmo5U34)-methyltransferase; HAMAP: tRNA (cmo5U34)-methyltransferase; KEGG: spe:Spro_2786 putative methyltransferase; PFAM: Methyltransferase type 11
YP_004501307.1	TIGRFAM: tRNA (mo5U34)-methyltransferase; HAMAP: tRNA (mo5U34)-methyltransferase; KEGG: spe:Spro_2787 putative methyltransferase; PFAM: tRNA (mo5U34)-methyltransferase
YP_004501308.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: eta:ETA_02710 peptidyl-prolyl cis-trans isomerase, fragment
YP_004501309.1	KEGG: spe:Spro_4151 hypothetical protein
YP_004501310.1	KEGG: spe:Spro_2788 copper homeostasis protein CutC; HAMAP: Copper homeostasis protein cutC; PFAM: CutC
YP_004501311.1	KEGG: spe:Spro_2789 aminotransferase class I and II; PFAM: Aminotransferase, class I/II
YP_004501312.1	PFAM: Protein of unknown function DUF991; KEGG: spe:Spro_2790 hypothetical protein
YP_004501313.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; HAMAP: Arginyl-tRNA synthetase, class Ic; KEGG: spe:Spro_2791 arginyl-tRNA synthetase
YP_004501314.1	manually curated; TIGRFAM: Flagellin assembly, membrane protein MviN; KEGG: spe:Spro_2792 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_004501315.1	PFAM: Oxidoreductase, N-terminal; KEGG: spe:Spro_2793 oxidoreductase domain-containing protein
YP_004501316.1	KEGG: spe:Spro_2794 hypothetical protein; HAMAP: Protein of unknown function DUF480; PFAM: Protein of unknown function DUF480
YP_004501317.1	KEGG: spe:Spro_2795 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004501318.1	KEGG: spe:Spro_2796 multidrug resistance protein MdtH; HAMAP: Multidrug resistance protein mdtH; PFAM: Major facilitator superfamily MFS-1
YP_004501319.1	KEGG: spe:Spro_2797 hypothetical protein
YP_004501320.1	KEGG: spe:Spro_2798 glutaredoxin 2; TIGRFAM: Glutaredoxin, GrxB; PFAM: Glutaredoxin 2, C-terminal
YP_004501321.1	PFAM: ABC-1; KEGG: spe:Spro_2799 hypothetical protein
YP_004501322.1	PFAM: Protein of unknown function DUF1439; KEGG: spe:Spro_2800 hypothetical protein
YP_004501323.1	KEGG: spe:Spro_2801 hypothetical protein
YP_004501324.1	KEGG: spe:Spro_2802 hypothetical protein; HAMAP: Uncharacterised conserved protein UCP029143; PFAM: ASCH domain
YP_004501325.1	PFAM: YebG; KEGG: spe:Spro_2803 YebG family protein
YP_004501326.1	KEGG: spe:Spro_2804 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004501327.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; HAMAP: Phosphoribosylglycinamide formyltransferase 2; KEGG: spe:Spro_2805 phosphoribosylglycinamide formyltransferase 2
YP_004501328.1	KEGG: spe:Spro_2806 hypothetical protein; HAMAP: Uncharacterised protein family UPF0181; PFAM: Uncharacterised protein family UPF0181
YP_004501329.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_2807 putative glycosyl transferase
YP_004501331.1	TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: spe:Spro_2808 para-aminobenzoate synthase subunit I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004501332.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_2809 hypothetical protein
YP_004501333.1	TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: spe:Spro_2810 L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain
YP_004501334.1	KEGG: spe:Spro_2811 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004501335.1	PFAM: Integral membrane protein TerC; Cystathionine beta-synthase, core; Transporter-associated region; KEGG: spe:Spro_2812 integral membrane protein TerC
YP_004501336.1	TIGRFAM: Phosphotransferase system, sorbose subfamily IIB component, subgroup; Phosphotransferase system, fructose subfamily IIA component, subgroup; KEGG: spe:Spro_2813 PTS system mannose/fructose/sorbose family transporter subunit IIB; PFAM: Phosphotransferase system, sorbose subfamily IIB component; Phosphotransferase system, fructose subfamily IIA component
YP_004501337.1	KEGG: spe:Spro_2814 PTS system mannose/fructose/sorbose family transporter subunit IIC; TIGRFAM: Phosphotransferase system, sorbose-specific IIC subunit, subgroup; PFAM: Phosphotransferase system, sorbose-specific IIC subunit
YP_004501338.1	KEGG: spe:Spro_2815 PTS system mannose-specific transporter subunit IID; TIGRFAM: Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup; PFAM: Phosphotransferase system, mannose/fructose/sorbose family IID component
YP_004501339.1	KEGG: spe:Spro_2816 hypothetical protein; HAMAP: UPF0266 membrane protein yobD; PFAM: Protein of unknown function DUF986
YP_004501340.1	KEGG: spe:Spro_2817 hypothetical protein; HAMAP: UPF0059 membrane protein yebN; PFAM: Protein of unknown function DUF204
YP_004501341.1	KEGG: spe:Spro_2818 major facilitator transporter; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004501342.1	SMART: HTH transcriptional regulator, ArsR; KEGG: spe:Spro_2819 ArsR family transcriptional regulator
YP_004501343.1	KEGG: spe:Spro_2820 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11
YP_004501344.1	PFAM: Multi-copper polyphenol oxidoreductase, laccase; KEGG: spe:Spro_2821 hypothetical protein
YP_004501345.1	KEGG: rah:Rahaq_2905 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004501346.1	KEGG: spe:Spro_2823 beta-lactamase domain-containing protein
YP_004501347.1	KEGG: spe:Spro_2824 hypothetical protein
YP_004501348.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_2825 amino acid permease-associated protein
YP_004501349.1	KEGG: spe:Spro_2826 hypothetical protein
YP_004501350.1	PFAM: Protein of unknown function DUF2591; KEGG: spe:Spro_2827 hypothetical protein
YP_004501351.1	KEGG: pva:Pvag_1856 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004501352.1	KEGG: spe:Spro_2828 hypothetical protein
YP_004501353.1	KEGG: spe:Spro_2830 hypothetical protein
YP_004501354.1	KEGG: spe:Spro_2831 hypothetical protein
YP_004501355.1	KEGG: spe:Spro_2832 hypothetical protein
YP_004501356.1	KEGG: spe:Spro_2833 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501357.1	PFAM: Protein of unknown function DUF1304; KEGG: spe:Spro_2834 hypothetical protein
YP_004501358.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: spe:Spro_2835 pirin domain-containing protein
YP_004501360.1	KEGG: spe:Spro_2836 LysM domain/BON superfamily protein; PFAM: Peptidoglycan-binding lysin domain; Transport-associated; SMART: Peptidoglycan-binding Lysin subgroup; Transport-associated and nodulation region, bacteria
YP_004501361.1	PFAM: Protein of unknown function DUF1482; KEGG: spe:Spro_2837 hypothetical protein
YP_004501362.1	KEGG: spe:Spro_2838 hypothetical protein
YP_004501363.1	PFAM: Porin, Gram-negative type; KEGG: spe:Spro_2839 porin
YP_004501364.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; TIGRFAM: Succinylglutamate desuccinylase; HAMAP: Succinylglutamate desuccinylase; KEGG: spe:Spro_2840 succinylglutamate desuccinylase
YP_004501365.1	PFAM: Succinylarginine dihydrolase; TIGRFAM: Succinylarginine dihydrolase; HAMAP: N-succinylarginine dihydrolase; KEGG: spe:Spro_2841 succinylarginine dihydrolase
YP_004501366.1	PFAM: Aldehyde dehydrogenase; TIGRFAM: Succinylglutamic semialdehyde dehydrogenase; HAMAP: Succinylglutamic semialdehyde dehydrogenase; KEGG: spe:Spro_2842 succinylglutamic semialdehyde dehydrogenase
YP_004501367.1	TIGRFAM: Arginine N-succinyltransferase AstA; Arginine N-succinyltransferase Ast/AOST; KEGG: spe:Spro_2843 arginine succinyltransferase; PFAM: Arginine N-succinyltransferase Ast/AOST
YP_004501368.1	PFAM: Aminotransferase class-III; TIGRFAM: Succinylornithine transaminase family; Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: spe:Spro_2844 bifunctional succinylornithine transaminase/acetylornithine transaminase
YP_004501369.1	KEGG: spe:Spro_2852 alpha/beta hydrolase domain-containing protein
YP_004501370.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2853 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004501371.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: spe:Spro_2854 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004501372.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2855 binding-protein-dependent transport systems inner membrane component
YP_004501373.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2856 binding-protein-dependent transport systems inner membrane component
YP_004501374.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2857 extracellular solute-binding protein
YP_004501375.1	KEGG: spe:Spro_2858 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004501376.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: spe:Spro_2859 cytochrome bd ubiquinol oxidase subunit I
YP_004501377.1	KEGG: spe:Spro_2860 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004501378.1	PFAM: Protein of unknown function DUF2474; KEGG: spe:Spro_2861 hypothetical protein
YP_004501379.1	KEGG: spe:Spro_2870 hypothetical protein
YP_004501381.1	PFAM: Fatty acid desaturase, type 1; KEGG: spe:Spro_2862 fatty acid desaturase
YP_004501382.1	PFAM: Fatty acid desaturase, type 1; KEGG: spe:Spro_2863 fatty acid desaturase
YP_004501383.1	PFAM: Fatty acid hydroxylase; KEGG: spe:Spro_2864 fatty acid hydroxylase
YP_004501384.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: spe:Spro_2865 hypothetical protein
YP_004501385.1	TIGRFAM: Conserved hypothetical protein, F390 synthetase-related; KEGG: spe:Spro_2866 putative adenylate-forming protein
YP_004501386.1	KEGG: spe:Spro_2867 beta-lactamase domain-containing protein
YP_004501387.1	KEGG: spe:Spro_2868 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004501388.1	KEGG: spe:Spro_2869 beta-ketoacyl-acyl-carrier-protein synthase I; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004501389.1	TIGRFAM: Nitrate reductase, gamma subunit; KEGG: spe:Spro_2880 respiratory nitrate reductase subunit gamma; PFAM: Nitrate reductase, gamma subunit
YP_004501390.1	TIGRFAM: Nitrate reductase, delta subunit; KEGG: spe:Spro_2881 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit
YP_004501391.1	KEGG: spe:Spro_2882 nitrate reductase subunit beta; TIGRFAM: Nitrate reductase, beta subunit
YP_004501392.1	TIGRFAM: Nitrate reductase, alpha subunit; KEGG: spe:Spro_2883 nitrate reductase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004501393.1	KEGG: spe:Spro_2884 hypothetical protein
YP_004501394.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_2885 glycosyl transferase family protein
YP_004501395.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_2886 glycosyl transferase family protein
YP_004501396.1	PFAM: Carbohydrate-binding, CenC-like; KEGG: spe:Spro_2887 carbohydrate-binding CenC domain-containing protein
YP_004501397.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_2888 glycosyl transferase family protein
YP_004501398.1	PFAM: Glycosyl transferase, group 1; KEGG: spe:Spro_2889 group 1 glycosyl transferase
YP_004501399.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_2890 glycosyl transferase family protein
YP_004501400.1	KEGG: spe:Spro_2891 hypothetical protein
YP_004501401.1	PFAM: Polysaccharide biosynthesis protein; KEGG: spe:Spro_2892 polysaccharide biosynthesis protein
YP_004501402.1	TIGRFAM: Exopolysaccharide synthesis protein; KEGG: spe:Spro_2893 non-specific protein-tyrosine kinase; PFAM: Lipopolysaccharide biosynthesis
YP_004501403.1	KEGG: spe:Spro_2894 polysaccharide export protein; manually curated; PFAM: Polysaccharide export protein; Soluble ligand binding domain
YP_004501404.1	KEGG: spe:Spro_2895 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; TIGRFAM: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region
YP_004501405.1	KEGG: spe:Spro_2896 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004501406.1	KEGG: spe:Spro_2897 transcriptional regulator CadC; manually curated; PFAM: Signal transduction response regulator, C-terminal
YP_004501407.1	KEGG: spe:Spro_2898 nitrite transporter; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1
YP_004501408.1	KEGG: spe:Spro_2899 nitrate/nitrite sensor protein NarX; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; ATP-binding region, ATPase-like; SMART: HAMP linker domain; ATP-binding region, ATPase-like
YP_004501409.1	KEGG: spe:Spro_2900 transcriptional regulator NarL; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004501410.1	KEGG: spe:Spro_2901 hypothetical protein
YP_004501411.1	KEGG: spe:Spro_2902 peptidase A24A prepilin type IV; PFAM: Peptidase A24A, prepilin type IV
YP_004501412.1	KEGG: spe:Spro_2903 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP
YP_004501413.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: spe:Spro_2904 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004501414.1	KEGG: spe:Spro_2905 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region
YP_004501415.1	TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; Nitrite reductase [NAD(P)H] large subunit, NirD; KEGG: spe:Spro_2906 nitrite reductase (NAD(P)H), large subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004501416.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: spe:Spro_2907 nitrate ABC transporter ATPase subunits C and D; PFAM: ABC transporter-like
YP_004501417.1	KEGG: spe:Spro_2908 nitrate ABC transporter inner membrane subunit; TIGRFAM: Nitrate transport permease; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004501418.1	KEGG: spe:Spro_2909 nitrate-binding proteint
YP_004501419.1	PFAM: Nitrate/nitrite sensing protein NIT; ANTAR; KEGG: spe:Spro_2910 response regulator receiver/ANTAR domain-containing protein
YP_004501420.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2911 extracellular solute-binding protein
YP_004501421.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2912 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501422.1	PFAM: ABC transporter-like; KEGG: spe:Spro_2913 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501423.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2914 binding-protein-dependent transport systems inner membrane component
YP_004501424.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2915 binding-protein-dependent transport systems inner membrane component
YP_004501425.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_2916 4-phytase
YP_004501426.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein
YP_004501427.1	PFAM: ChaC-like protein; KEGG: spe:Spro_2918 ChaC family protein
YP_004501428.1	PFAM: ChaB; KEGG: ctu:Ctu_24170 cation transport regulator
YP_004501429.1	PFAM: FAD-binding 9, siderophore-interacting; Siderophore-interacting protein; KEGG: spe:Spro_2919 FAD-binding 9 siderophore-interacting domain-containing protein
YP_004501430.1	KEGG: spe:Spro_2920 calcium/sodium:proton antiporter; TIGRFAM: Calcium/proton exchanger; PFAM: Sodium/calcium exchanger membrane region
YP_004501431.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: spe:Spro_2921 aspartyl/asparaginyl beta-hydroxylase
YP_004501432.1	PFAM: PhoH-like protein; KEGG: spe:Spro_2925 hypothetical protein
YP_004501434.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spe:Spro_2926 TonB-dependent receptor
YP_004501435.1	KEGG: spe:Spro_2927 Dyp-type peroxidase family protein; TIGRFAM: Tat-translocated enzyme; Twin-arginine translocation pathway, signal sequence; Dyp-type peroxidase; PFAM: Dyp-type peroxidase
YP_004501436.1	PFAM: Peptidase M75, Imelysin; KEGG: spe:Spro_2928 hypothetical protein
YP_004501437.1	PFAM: Iron permease FTR1; KEGG: spe:Spro_2929 iron permease FTR1
YP_004501438.1	KEGG: spe:Spro_2930 sodium/proline symporter; TIGRFAM: Sodium/proline symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_004501439.1	TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3; KEGG: spe:Spro_2931 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase
YP_004501440.1	KEGG: spe:Spro_2932 YcfA family protein; manually curated; PFAM: YcfA-like
YP_004501441.1	PFAM: Uncharacterised protein family UPF0150; KEGG: spe:Spro_2933 hypothetical protein
YP_004501442.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: spe:Spro_2934 putative amino-acid ABC transporter ATP-binding protein YecC; SMART: ATPase, AAA+ type, core
YP_004501443.1	KEGG: spe:Spro_2935 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004501444.1	KEGG: spe:Spro_2936 cystine transporter subunit; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor
YP_004501445.1	TIGRFAM: Pyridoxal phosphate-dependent deaminase; KEGG: spe:Spro_2937 D-cysteine desulfhydrase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004501446.1	TIGRFAM: flagellar regulatory protein FliZ; KEGG: spe:Spro_2938 flagella biosynthesis protein FliZ
YP_004501447.1	KEGG: spe:Spro_2939 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3
YP_004501448.1	PFAM: Flagellin, N-terminal; Flagellin, C-terminal; KEGG: spe:Spro_2940 flagellin domain-containing protein
YP_004501449.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; Flagellin hook, IN motif; KEGG: spe:Spro_2941 flagellar hook-associated 2 domain-containing protein
YP_004501450.1	KEGG: spe:Spro_2942 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_004501451.1	KEGG: spe:Spro_2943 flagellar biosynthesis protein FliT; HAMAP: Flagellar protein fliT; PFAM: Flagellar export chaperone
YP_004501452.1	KEGG: spe:Spro_2944 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501456.1	TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: spe:Spro_2946 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_004501457.1	KEGG: spe:Spro_2947 flagellar MS-ring protein; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal
YP_004501458.1	KEGG: spe:Spro_2948 flagellar motor switch protein G; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG
YP_004501459.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: spe:Spro_2949 flagellar assembly protein H
YP_004501460.1	TIGRFAM: Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; KEGG: spe:Spro_2950 flagellum-specific ATP synthase; SMART: ATPase, AAA+ type, core
YP_004501461.1	TIGRFAM: Flagellar export FliJ; KEGG: spe:Spro_2951 flagellar biosynthesis chaperone
YP_004501462.1	PFAM: Flagellar hook-length control protein; KEGG: spe:Spro_2952 flagellar hook-length control protein
YP_004501464.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: spe:Spro_2953 flagellar basal body-associated protein FliL
YP_004501465.1	KEGG: spe:Spro_2954 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_004501466.1	KEGG: spe:Spro_2955 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_004501467.1	KEGG: spe:Spro_2956 flagellar biosynthesis protein FliO; TIGRFAM: Flagellar biosynthesis protein, FliO; PFAM: Flagellar biosynthesis protein, FliO
YP_004501468.1	KEGG: spe:Spro_2957 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_004501469.1	KEGG: spe:Spro_2958 flagellar biosynthesis protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; PFAM: Bacterial export protein FliQ, family 3
YP_004501470.1	KEGG: spe:Spro_2959 flagellar biosynthesis protein FliR; TIGRFAM: Flagellar biosynthesis protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_004501474.1	KEGG: spe:Spro_2960 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal
YP_004501475.1	KEGG: spe:Spro_2961 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004501476.1	TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG: spe:Spro_2962 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2
YP_004501477.1	KEGG: spe:Spro_2963 flagellar basal body P-ring protein; HAMAP: Flagellar P-ring protein; PFAM: Flagellar P-ring protein
YP_004501478.1	KEGG: spe:Spro_2964 flagellar basal body L-ring protein; HAMAP: Flagellar L-ring protein; PFAM: Flagellar L-ring protein
YP_004501479.1	KEGG: spe:Spro_2965 flagellar basal body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004501480.1	KEGG: spe:Spro_2966 flagellar basal body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body rod protein, N-terminal
YP_004501481.1	KEGG: spe:Spro_2967 flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_004501482.1	PFAM: Flagellar hook capping protein; KEGG: spe:Spro_2968 flagellar basal body rod modification protein
YP_004501483.1	KEGG: spe:Spro_2969 flagellar basal body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal
YP_004501484.1	KEGG: spe:Spro_2970 flagellar basal body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004501485.1	KEGG: spe:Spro_2971 SAF domain-containing protein; TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain
YP_004501486.1	KEGG: spe:Spro_2972 anti-sigma28 factor FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_004501487.1	PFAM: FlgN; KEGG: spe:Spro_2973 FlgN family protein
YP_004501488.1	PFAM: Protein of unknown function DUF1044; KEGG: ajs:Ajs_2626 hypothetical protein
YP_004501489.1	PFAM: Protein of unknown function DUF1044
YP_004501490.1	PFAM: Helix-turn-helix type 3; KEGG: spe:Spro_2974 XRE family transcriptional regulator
YP_004501491.1	PFAM: Flagellar FlhE; KEGG: spe:Spro_2975 flagellar FlhE family protein
YP_004501492.1	KEGG: spe:Spro_2976 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_004501493.1	KEGG: spe:Spro_2977 flagellar biosynthesis protein FlhB; TIGRFAM: Flagellar biosynthetic protein FlhB; PFAM: Type III secretion exporter
YP_004501494.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: spe:Spro_2978 chemotaxis regulator CheZ
YP_004501495.1	KEGG: spe:Spro_2979 chemotaxis regulatory protein CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004501496.1	SMART: Signal transduction response regulator, receiver region; HAMAP: Chemotaxis response regulator protein-glutamate methylesterase; KEGG: spe:Spro_2980 chemotaxis-specific methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver region
YP_004501497.1	PFAM: MCP methyltransferase, CheR-type; KEGG: spe:Spro_2981 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase, CheR-type
YP_004501498.1	KEGG: spe:Spro_2982 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Chemotaxis methyl-accepting receptor, ligand-binding; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; Chemotaxis methyl-accepting receptor, ligand-binding; HAMP linker domain
YP_004501499.1	KEGG: spe:Spro_2983 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Chemotaxis methyl-accepting receptor, ligand-binding; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; Chemotaxis methyl-accepting receptor, ligand-binding; HAMP linker domain
YP_004501501.1	KEGG: spe:Spro_2984 purine-binding chemotaxis protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004501502.1	KEGG: spe:Spro_2985 chemotaxis protein CheA; PFAM: CheY binding; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; ATP-binding region, ATPase-like; CheW-like protein; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) region; ATP-binding region, ATPase-like
YP_004501503.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: spe:Spro_2986 OmpA/MotB domain-containing protein
YP_004501504.1	TIGRFAM: flagellar motor stator protein MotA; KEGG: spe:Spro_2987 flagellar motor protein MotA
YP_004501505.1	PFAM: Flagellar transcriptional activator FlhC; KEGG: spe:Spro_2988 transcriptional activator FlhC
YP_004501506.1	KEGG: spe:Spro_2989 transcriptional activator FlhD; HAMAP: Transcriptional activator FlhD; PFAM: Flagellar transcriptional activator
YP_004501507.1	PFAM: Haemolysin expression modulating, HHA; KEGG: spe:Spro_2990 hemolysin expression modulating family protein
YP_004501508.1	PFAM: UspA; KEGG: spe:Spro_2991 universal stress protein UspC
YP_004501509.1	KEGG: spe:Spro_2992 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding
YP_004501510.1	PFAM: Bacterial transcription activator, effector binding; KEGG: spe:Spro_3021 DNA gyrase inhibitor
YP_004501511.1	KEGG: spe:Spro_3022 tryptophan 23-dioxygenase; TIGRFAM: Tryptophan 2,3-dioxygenase, bacteria; PFAM: Tryptophan 2,3-dioxygenase
YP_004501512.1	KEGG: kpe:KPK_A0149 hypothetical protein
YP_004501514.1	KEGG: pva:Pvag_1214 UmuC protein; PFAM: DNA-repair protein, UmuC-like
YP_004501515.1	KEGG: mar:MAE_36710 hypothetical protein
YP_004501516.1	PFAM: Major facilitator superfamily MFS-1; KEGG: kpu:KP1_2796 putative permease of the major facilitator superfamily
YP_004501517.1	KEGG: pam:PANA_0337 DsbG
YP_004501518.1	KEGG: pap:PSPA7_4153 hypothetical protein
YP_004501519.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ebi:EbC_25470 DNA polymerase V, subunit D
YP_004501520.1	KEGG: enc:ECL_00718 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004501521.1	KEGG: ebi:EbC_06430 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1
YP_004501522.1	PFAM: Protein of unknown function DUF894, DitE; KEGG: ebi:EbC_06440 major facilitator superfamily protein
YP_004501523.1	PFAM: DoxX; KEGG: pao:Pat9b_1933 DoxX family protein
YP_004501524.1	PFAM: Amidohydrolase 3; KEGG: pao:Pat9b_1932 amidohydrolase 3
YP_004501525.1	PFAM: Isochorismatase-like; KEGG: enc:ECL_00713 isochorismatase hydrolase
YP_004501526.1	KEGG: enc:ECL_00714 hypothetical protein; TIGRFAM: XapX domain; PFAM: Protein of unknown function DUF1427
YP_004501527.1	KEGG: enc:ECL_00715 hypothetical protein; TIGRFAM: XapX domain; PFAM: Protein of unknown function DUF1427
YP_004501528.1	KEGG: enc:ECL_00716 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004501529.1	PFAM: ATP-binding region, ATPase-like; Serine/threonine-protein kinase-like domain; GAF; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: enc:ECL_00717 PAS sensor protein; SMART: ATP-binding region, ATPase-like; GAF; Serine/threonine-protein kinase domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004501530.1	TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; KEGG: spe:Spro_3036 IclR family transcriptional regulator; SMART: Transcriptional regulator IclR, N-terminal
YP_004501531.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: spe:Spro_3037 3-oxoacid CoA-transferase, subunit A; PFAM: Coenzyme A transferase
YP_004501532.1	TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: spe:Spro_3038 3-oxoacid CoA-transferase, subunit B; PFAM: Coenzyme A transferase
YP_004501533.1	KEGG: spe:Spro_3039 beta-ketoadipyl CoA thiolase; TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase
YP_004501534.1	TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: spe:Spro_3040 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1
YP_004501535.1	TIGRFAM: Arsenate reductase; KEGG: enc:ECL_00465 arsenate reductase; PFAM: Arsenate reductase-like
YP_004501536.1	KEGG: spc:Sputcn32_3829 arsenical pump membrane protein; TIGRFAM: Arsenical pump membrane protein; PFAM: Arsenical pump membrane protein
YP_004501537.1	KEGG: enc:ECL_00470 arsenical resistance operon repressor; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004501538.1	TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase ybdK; KEGG: cko:CKO_00830 hypothetical protein; PFAM: Glutamate--cysteine ligase, GCS2
YP_004501539.1	KEGG: spe:Spro_3041 hypothetical protein
YP_004501540.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dda:Dd703_2133 LysR family transcriptional regulator
YP_004501541.1	PFAM: Protein of unknown function DUF606; KEGG: cvi:CV_3483 hypothetical protein
YP_004501542.1	PFAM: Protein of unknown function DUF606; KEGG: cvi:CV_3484 hypothetical protein
YP_004501543.1	KEGG: spe:Spro_3042 hypothetical protein
YP_004501544.1	KEGG: spe:Spro_3043 hypothetical protein
YP_004501545.1	TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: spe:Spro_3044 magnesium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal
YP_004501546.1	PFAM: MgtC/SapB transporter; KEGG: spe:Spro_3045 MgtC/SapB transporter
YP_004501547.1	KEGG: spe:Spro_3046 hypothetical protein
YP_004501548.1	PFAM: CoA-transferase family III; KEGG: spe:Spro_3047 L-carnitine dehydratase/bile acid-inducible protein F
YP_004501549.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3048 LysR family transcriptional regulator
YP_004501550.1	KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase
YP_004501551.1	KEGG: spe:Spro_3050 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004501552.1	KEGG: spe:Spro_3051 hypothetical protein; HAMAP: Dextransucrase DSRB; PFAM: Dextransucrase DSRB
YP_004501553.1	KEGG: spe:Spro_3052 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004501554.1	KEGG: spe:Spro_3054 hypothetical protein
YP_004501556.1	KEGG: spe:Spro_3055 hypothetical protein
YP_004501557.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: spe:Spro_3056 quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004501558.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3057 endonuclease/exonuclease/phosphatase
YP_004501559.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3058 NAD-dependent epimerase/dehydratase
YP_004501560.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3059 LysR family transcriptional regulator
YP_004501561.1	PFAM: Protein of unknown function DUF937, bacterial; KEGG: spe:Spro_3060 hypothetical protein
YP_004501562.1	PFAM: Transglycosylase-associated protein; KEGG: spe:Spro_3061 hypothetical protein
YP_004501563.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: rah:Rahaq_0768 hypothetical protein
YP_004501564.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3062 LysR family transcriptional regulator
YP_004501565.1	KEGG: spe:Spro_3063 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501566.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3064 3-demethylubiquinone-9 3-methyltransferase
YP_004501567.1	KEGG: spe:Spro_3065 hypothetical protein
YP_004501568.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: spe:Spro_3068 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004501569.1	TIGRFAM: Phenylacetic acid degradation protein paaN; KEGG: spe:Spro_3071 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; PFAM: MaoC-like dehydratase; Aldehyde dehydrogenase
YP_004501570.1	KEGG: spe:Spro_3072 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: Phenylacetate-CoA oxygenase, PaaG subunit; PFAM: Phenylacetic acid catabolic
YP_004501571.1	KEGG: spe:Spro_3073 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: Phenylacetic acid degradation B; PFAM: Phenylacetic acid degradation B
YP_004501572.1	KEGG: spe:Spro_3074 phenylacetate-CoA oxygenase, PaaI subunit; TIGRFAM: Phenylacetate-CoA oxygenase, PaaI subunit; PFAM: Phenylacetic acid catabolic
YP_004501573.1	KEGG: spe:Spro_3075 phenylacetate-CoA oxygenase, PaaJ subunit; TIGRFAM: Phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: Protein of unknown function DUF59
YP_004501574.1	KEGG: spe:Spro_3076 phenylacetate-CoA oxygenase/reductase subunit PaaK; TIGRFAM: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: Ferredoxin; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004501575.1	PFAM: Crotonase, core; KEGG: spe:Spro_3077 enoyl-CoA hydratase-isomerase
YP_004501576.1	KEGG: spe:Spro_3078 enoyl-CoA hydratase; TIGRFAM: Phenylacetate degradation probable enoyl-CoA hydratase paaB; PFAM: Crotonase, core
YP_004501577.1	KEGG: spe:Spro_3079 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004501578.1	KEGG: spe:Spro_3080 phenylacetic acid degradation protein PaaD; TIGRFAM: Phenylacetic acid degradation protein PaaD; Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004501580.1	TIGRFAM: Phenylacetate-CoA ligase; KEGG: spe:Spro_3082 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004501581.1	KEGG: spe:Spro_3083 PaaX family transcriptional regulator; TIGRFAM: Phenylacetic acid degradation operon negative regulatory protein paaX; PFAM: PaaX-like, C-terminal; PaaX-like, N-terminal
YP_004501582.1	KEGG: spe:Spro_3084 phenylacetic acid degradation protein PaaY; TIGRFAM: Phenylacetic acid degradation protein PaaY; PFAM: Bacterial transferase hexapeptide repeat
YP_004501583.1	KEGG: bam:Bamb_4617 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004501584.1	KEGG: acd:AOLE_07670 AraC family transcription regulator; PFAM: Helix-turn-helix, AraC type; ThiJ/PfpI; SMART: Helix-turn-helix, AraC domain
YP_004501585.1	KEGG: pao:Pat9b_1286 hypothetical protein
YP_004501586.1	PFAM: Protein of unknown function DUF6, transmembrane; Na+/H+ antiporter NhaC-like; KEGG: spe:Spro_3086 hypothetical protein
YP_004501587.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_3087 amino acid permease-associated protein
YP_004501588.1	KEGG: spe:Spro_3088 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_004501589.1	PFAM: Endoribonuclease L-PSP; KEGG: spe:Spro_3089 endoribonuclease L-PSP
YP_004501590.1	KEGG: spe:Spro_3090 esterase/lipase-like protein
YP_004501591.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3091 LysR family transcriptional regulator
YP_004501592.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spe:Spro_3092 glutathione S-transferase domain-containing protein
YP_004501593.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: spe:Spro_3093 pyridoxamine 5'-phosphate oxidase-like protein
YP_004501594.1	KEGG: spe:Spro_3094 glycogen synthesis protein
YP_004501595.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: spe:Spro_3095 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004501596.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3096 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004501597.1	PFAM: Cupin 2, conserved barrel; KEGG: spe:Spro_3098 cupin 2 domain-containing protein
YP_004501598.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3099 LysR family transcriptional regulator
YP_004501599.1	TIGRFAM: Amino acid adenylation; KEGG: eta:ETA_29170 similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase
YP_004501600.1	SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate related; KEGG: spe:Spro_3100 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal
YP_004501601.1	PFAM: Phosphoglycerate mutase; KEGG: esa:ESA_pESA3p05525 hypothetical protein
YP_004501602.1	KEGG: spe:Spro_3102 major facilitator superfamily oligosaccharide/H+ symporter; TIGRFAM: Proton/sugar symporter, LacY; PFAM: Proton/sugar symporter, LacY
YP_004501603.1	KEGG: spe:Spro_3103 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 4
YP_004501604.1	KEGG: spe:Spro_3104 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501605.1	KEGG: spe:Spro_3106 hypothetical protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_004501606.1	KEGG: pfl:PFL_2254 hypothetical protein
YP_004501607.1	KEGG: sme:SMa1067 putative transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004501608.1	KEGG: sme:SMa1067 putative transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding
YP_004501609.1	KEGG: spe:Spro_3110 hypothetical protein; HAMAP: Protein mtfA; PFAM: Protein of unknown function DUF980
YP_004501610.1	KEGG: spe:Spro_3182 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004501611.1	KEGG: ent:Ent638_2279 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501612.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rah:Rahaq_1903 short-chain dehydrogenase/reductase SDR
YP_004501613.1	KEGG: rah:Rahaq_1902 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004501614.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_3184 TetR family transcriptional regulator
YP_004501615.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: rah:Rahaq_1650 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004501616.1	KEGG: pfl:PFL_0319 hypothetical protein
YP_004501617.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: pfl:PFL_0320 acid phosphatase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004501618.1	PFAM: MltA-interacting MipA; KEGG: pfl:PFL_0321 hypothetical protein
YP_004501620.1	PFAM: Protein of unknown function DUF1214; Protein of unknown function DUF1254; KEGG: pfl:PFL_0322 hypothetical protein
YP_004501621.1	KEGG: pva:Pvag_pPag30129 hypothetical protein
YP_004501622.1	KEGG: pao:Pat9b_5352 alcohol dehydrogenase zinc-binding domain-containing protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004501623.1	PFAM: Biotin/lipoate A/B protein ligase; KEGG: kpn:KPN_02459 putative lipoate-protein ligase A
YP_004501624.1	KEGG: epy:EpC_14400 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004501625.1	KEGG: spe:Spro_3114 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004501626.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_3115 extracellular solute-binding protein
YP_004501627.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3116 binding-protein-dependent transport systems inner membrane component
YP_004501628.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_3117 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501629.1	PFAM: Inositol monophosphatase; KEGG: spe:Spro_3118 inositol-phosphate phosphatase
YP_004501630.1	TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: spe:Spro_3119 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004501631.1	KEGG: spe:Spro_3120 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501632.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: xfa:XF1741 daunorubicin C-13 ketoreductase
YP_004501633.1	PFAM: Luciferase-like, subgroup; KEGG: spe:Spro_3121 luciferase family protein
YP_004501634.1	PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; KEGG: spe:Spro_3122 TenA family transcription regulator
YP_004501635.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3123 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501636.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3124 binding-protein-dependent transport systems inner membrane component
YP_004501637.1	KEGG: spe:Spro_3125 NMT1/THI5-like domain-containing protein
YP_004501638.1	KEGG: met:M446_1628 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004501639.1	KEGG: spe:Spro_3126 phosphoglycerol transferase I; PFAM: Sulfatase
YP_004501640.1	TIGRFAM: AMP nucleosidase; KEGG: spe:Spro_3127 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase, N-terminal; Nucleoside phosphorylase
YP_004501641.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3129 nitrogen assimilation transcriptional regulator
YP_004501642.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dze:Dd1591_2458 short-chain dehydrogenase/reductase SDR
YP_004501643.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dze:Dd1591_2459 TetR family transcriptional regulator
YP_004501644.1	PFAM: Helix-turn-helix, AraC type; KEGG: ctu:Ctu_06220 right origin-binding protein
YP_004501645.1	KEGG: eca:ECA1481 hypothetical protein
YP_004501646.1	KEGG: pwa:Pecwa_2845 hypothetical protein
YP_004501647.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3131 LysR family transcriptional regulator
YP_004501648.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3132 major facilitator transporter
YP_004501649.1	PFAM: Helix-turn-helix, HxlR type; KEGG: bxe:Bxe_B1101 putative transcriptional regulator
YP_004501650.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: bxe:Bxe_B1098 putative reductase
YP_004501651.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bxe:Bxe_B1099 putative epimerase/dehydratase
YP_004501652.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: bpy:Bphyt_5762 NADP oxidoreductase coenzyme F420-dependent
YP_004501653.1	KEGG: mes:Meso_1112 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004501654.1	PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; KEGG: hoh:Hoch_6148 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_004501655.1	KEGG: hoh:Hoch_1307 hypothetical protein
YP_004501656.1	PFAM: Rhodanese-like; KEGG: ttu:TERTU_4548 rhodanese domain-containing protein; SMART: Rhodanese-like
YP_004501657.1	PFAM: Major facilitator superfamily MFS-1; KEGG: plu:plu0117 hypothetical protein
YP_004501658.1	PFAM: Protein of unknown function DUF1234; KEGG: rah:Rahaq_2328 hypothetical protein
YP_004501659.1	KEGG: rah:Rahaq_2329 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004501660.1	KEGG: bxe:Bxe_C0717 hypothetical protein
YP_004501661.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pam:PANA_4100 RhtC
YP_004501662.1	KEGG: pct:PC1_3494 hypothetical protein
YP_004501663.1	KEGG: ddd:Dda3937_04144 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal
YP_004501664.1	PFAM: Protein of unknown function DUF1852; KEGG: spe:Spro_3175 hypothetical protein
YP_004501665.1	KEGG: rah:Rahaq_4623 methionine synthase; PFAM: Methionine synthase, vitamin-B12 independent
YP_004501666.1	KEGG: eca:ECA2924 putative lipoprotein
YP_004501667.1	KEGG: pao:Pat9b_4510 PEBP family protein; TIGRFAM: YbhB/YbcL; PFAM: Phosphatidylethanolamine-binding protein PEBP
YP_004501668.1	KEGG: pao:Pat9b_4509 transcriptional regulator, AraC family; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501669.1	KEGG: spe:Spro_3179 major facilitator superfamily metabolite/H(+) symporter; TIGRFAM: Citrate-proton symport; PFAM: General substrate transporter
YP_004501670.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_3180 extracellular solute-binding protein
YP_004501671.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3181 LysR family transcriptional regulator
YP_004501672.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_2539 periplasmic binding protein
YP_004501673.1	KEGG: bra:BRADO0019 hypothetical protein
YP_004501674.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cak:Caul_0455 LysR family transcriptional regulator
YP_004501675.1	PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: hse:Hsero_2806 mrr restriction system protein
YP_004501676.1	KEGG: seh:SeHA_C2938 hypothetical protein
YP_004501678.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: pao:Pat9b_5741 transcriptional regulator, RpiR family
YP_004501679.1	KEGG: rah:Rahaq_5040 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004501680.1	KEGG: kva:Kvar_2733 oligosaccharide/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: Proton/sugar symporter, LacY; PFAM: Proton/sugar symporter, LacY
YP_004501681.1	KEGG: kva:Kvar_2732 glycoside hydrolase family 2 TIM barrel; HAMAP: Beta-galactosidase; PFAM: Glycoside hydrolase family 2, TIM barrel; Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5
YP_004501682.1	KEGG: kva:Kvar_2731 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004501683.1	KEGG: dda:Dd703_3132 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004501684.1	PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; KEGG: bgl:bglu_1g22930 two component transcriptional regulator, LuxR family protein
YP_004501685.1	KEGG: ddd:Dda3937_01471 phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004501686.1	PFAM: Protein of unknown function DUF606; KEGG: ent:Ent638_2105 hypothetical protein
YP_004501687.1	PFAM: GCN5-related N-acetyltransferase; KEGG: dvm:DvMF_0463 GCN5-related N-acetyltransferase
YP_004501688.1	KEGG: ara:Arad_2927 transcriptional regulator protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004501689.1	PFAM: Nitroreductase-like; KEGG: spe:Spro_3146 nitroreductase
YP_004501690.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3147 LysR family transcriptional regulator
YP_004501691.1	KEGG: spe:Spro_3148 NAD(P)H dehydrogenase (quinone)
YP_004501692.1	PFAM: Glycosyl transferase, family 9; KEGG: spe:Spro_3149 glycosyl transferase family protein
YP_004501693.1	PFAM: O-antigen ligase-related; KEGG: spe:Spro_3150 O-antigen polymerase
YP_004501694.1	KEGG: spe:Spro_3151 putative lipopolysaccharide glycosyltransferase
YP_004501695.1	TIGRFAM: Alkanesulphonate monooxygenase, FMN-dependent; KEGG: pva:Pvag_pPag10058 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup
YP_004501696.1	TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; PFAM: RNA polymerase sigma factor 54, interaction; NMT1/THI5 like; KEGG: ebi:EbC_20690 ABC-like transporter, ATPase subunit; SMART: Extracellular solute-binding protein, family 3; ATPase, AAA+ type, core
YP_004501697.1	KEGG: spe:Spro_3152 peroxidase-like protein; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004501698.1	PFAM: Luciferase-like, subgroup; KEGG: spe:Spro_3153 luciferase family protein
YP_004501699.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3154 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501700.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3155 binding-protein-dependent transport systems inner membrane component
YP_004501701.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3156 binding-protein-dependent transport systems inner membrane component
YP_004501702.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_3157 extracellular solute-binding protein
YP_004501703.1	KEGG: spe:Spro_3158 hypothetical protein
YP_004501704.1	PFAM: Threonyl/alanyl tRNA synthetase, SAD; KEGG: spe:Spro_3159 threonyl/alanyl tRNA synthetase SAD
YP_004501705.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3160 LysR family transcriptional regulator
YP_004501706.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: spe:Spro_3161 2OG-Fe(II) oxygenase
YP_004501707.1	TIGRFAM: RarD protein; KEGG: spe:Spro_3162 transporter DMT superfamily protein
YP_004501708.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: spe:Spro_3163 4'-phosphopantetheinyl transferase
YP_004501709.1	KEGG: spe:Spro_3164 glucose-1-phosphatase/inositol phosphatase; PFAM: Histidine acid phosphatase
YP_004501710.1	KEGG: spe:Spro_3165 anion transporter; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004501711.1	TIGRFAM: Triphosphoribosyl-dephospho-CoA synthase, CitG; KEGG: spe:Spro_3166 triphosphoribosyl-dephospho-CoA synthase; PFAM: Triphosphoribosyl-dephospho-CoA protein
YP_004501712.1	TIGRFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: spe:Spro_3167 holo-ACP synthase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
YP_004501713.1	TIGRFAM: Citrate lyase, alpha subunit; KEGG: spe:Spro_3168 citrate lyase subunit alpha; PFAM: Citrate lyase, alpha subunit
YP_004501714.1	TIGRFAM: Citrate lyase, beta subunit, bacteria; KEGG: spe:Spro_3169 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase
YP_004501715.1	TIGRFAM: Citrate lyase acyl carrier protein CitD; HAMAP: Citrate lyase acyl carrier protein; KEGG: spe:Spro_3170 citrate lyase subunit gamma; PFAM: Citrate lyase acyl carrier protein CitD
YP_004501716.1	SMART: Citrate lyase ligase, C-terminal; TIGRFAM: Citrate lyase ligase; Cytidyltransferase-related; KEGG: spe:Spro_3171 citrate lyase ligase; PFAM: Citrate lyase ligase, C-terminal; GCN5-related N-acetyltransferase
YP_004501717.1	KEGG: spe:Spro_3172 response regulator receiver/unknown domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004501718.1	KEGG: bam:Bamb_0730 hypothetical protein
YP_004501719.1	KEGG: bcj:BCAL3148 hypothetical protein
YP_004501720.1	TIGRFAM: Acetoin reductase; KEGG: pmr:PMI2092 acetoin(diacetyl) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501721.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: kva:Kvar_4124 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004501722.1	PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; KEGG: kpu:KP1_1117 dihydrolipoamide acetyltransferase
YP_004501723.1	KEGG: kpu:KP1_1118 acetoin:DCPIP oxidoreductase beta subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004501724.1	KEGG: kva:Kvar_4121 pyruvate dehydrogenase (acetyl-transferring); PFAM: Dehydrogenase, E1 component
YP_004501725.1	KEGG: kpu:KP1_1121 trans-acting regulatory protein of aco operon; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004501726.1	PFAM: Protein of unknown function DUF1440; KEGG: sea:SeAg_B4667 inner membrane protein YagU
YP_004501727.1	PFAM: Haem peroxidase, plant/fungal/bacterial; TIGRFAM: Catalase-peroxidase haem; HAMAP: Catalase-peroxidase haem; KEGG: spe:Spro_3192 catalase/peroxidase HPI
YP_004501728.1	PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: vvm:VVM_02072 HipA protein
YP_004501729.1	manually curated; PFAM: Helix-turn-helix type 3; KEGG: vvu:VV1_2191 hypothetical protein; SMART: Helix-turn-helix type 3
YP_004501730.1	KEGG: ddc:Dd586_2655 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator, N-terminal; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501731.1	PFAM: Flavodoxin-like fold; KEGG: ddc:Dd586_2654 NAD(P)H dehydrogenase (quinone)
YP_004501732.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pst:PSPTO_3196 LysR family transcriptional regulator
YP_004501733.1	PFAM: Major facilitator superfamily MFS-1; KEGG: psb:Psyr_3063 major facilitator transporter
YP_004501734.1	KEGG: spe:Spro_3194 sugar efflux transporter; HAMAP: sugar efflux transporter; PFAM: Major facilitator superfamily MFS-1
YP_004501735.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: spe:Spro_3198 aspartyl/asparaginyl beta-hydroxylase
YP_004501736.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3199 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501737.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3200 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501738.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_3201 inner-membrane translocator
YP_004501739.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_3202 inner-membrane translocator
YP_004501740.1	PFAM: Extracellular ligand-binding receptor; KEGG: spe:Spro_3203 extracellular ligand-binding receptor
YP_004501742.1	KEGG: cti:pRALTA_0597 hypothetical protein
YP_004501743.1	KEGG: kva:Kvar_2758 transcriptional regulator, LysR family; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004501744.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: kva:Kvar_2759 carboxymuconolactone decarboxylase
YP_004501745.1	PFAM: Major facilitator superfamily MFS-1; KEGG: bam:Bamb_1996 major facilitator transporter
YP_004501746.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bam:Bamb_1994 LysR family transcriptional regulator
YP_004501748.1	KEGG: rah:Rahaq_2364 phenylalanine/histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase
YP_004501749.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: rah:Rahaq_2365 substrate-binding region of ABC-type glycine betaine transport system
YP_004501750.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rah:Rahaq_2366 binding-protein-dependent transport systems inner membrane component
YP_004501751.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rah:Rahaq_2367 binding-protein-dependent transport systems inner membrane component
YP_004501752.1	PFAM: ABC transporter-like; KEGG: rah:Rahaq_2368 ABC transporter; SMART: ATPase, AAA+ type, core
YP_004501753.1	KEGG: eca:ECA2927 transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004501754.1	PFAM: Acriflavin resistance protein; KEGG: rah:Rahaq_1909 acriflavin resistance protein
YP_004501755.1	KEGG: rah:Rahaq_1908 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004501756.1	KEGG: pct:PC1_2679 transcriptional regulator, TetR family; manually curated; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_004501757.1	KEGG: rah:Rahaq_1906 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004501758.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: rah:Rahaq_1905 NADP oxidoreductase coenzyme F420-dependent
YP_004501759.1	PFAM: Helix-turn-helix, HxlR type; KEGG: eca:ECA2934 putative transcriptional regulator
YP_004501760.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: eca:ECA2935 hypothetical protein
YP_004501761.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3205 LysR family transcriptional regulator
YP_004501762.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: spe:Spro_3206 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004501763.1	KEGG: spe:Spro_3207 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004501764.1	KEGG: spe:Spro_3208 hypothetical protein; HAMAP: Protein of unknown function DUF496; PFAM: Protein of unknown function DUF496
YP_004501765.1	KEGG: spe:Spro_3209 hypothetical protein
YP_004501766.1	KEGG: spe:Spro_3210 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004501767.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: spe:Spro_3211 putative phage repressor
YP_004501768.1	PFAM: Male sterility, NAD-binding; KEGG: spe:Spro_3212 hypothetical protein
YP_004501770.1	PFAM: DNA polymerase III-theta, bacterial; KEGG: spe:Spro_3213 hypothetical protein
YP_004501771.1	PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; KEGG: spe:Spro_3214 exonuclease I; SMART: Exonuclease
YP_004501773.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_3215 amino acid permease-associated protein
YP_004501774.1	KEGG: yen:YE2760 hypothetical protein
YP_004501775.1	KEGG: spe:Spro_3216 glutamine synthetase catalytic region; PFAM: Glutamine synthetase, catalytic region
YP_004501776.1	KEGG: spe:Spro_3217 DNA-binding transcriptional repressor PuuR; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004501777.1	PFAM: FAD dependent oxidoreductase; KEGG: pao:Pat9b_2557 FAD dependent oxidoreductase
YP_004501778.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3218 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501779.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_3219 monosaccharide-transporting ATPase
YP_004501780.1	PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: spe:Spro_3220 putative outer membrane receptor
YP_004501781.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3221 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501782.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_3222 transport system permease
YP_004501783.1	KEGG: spe:Spro_3223 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted
YP_004501784.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_3224 lysine transporter
YP_004501785.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3225 putative DNA-binding transcriptional regulator
YP_004501786.1	KEGG: spe:Spro_3226 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0324, bacteria; PFAM: Uncharacterised protein family UPF0324, prokaryote
YP_004501787.1	KEGG: spe:Spro_3227 endonuclease IV; PFAM: Xylose isomerase, TIM barrel domain; TIGRFAM: Endodeoxyribonuclease IV; HAMAP: Endodeoxyribonuclease IV; SMART: Endodeoxyribonuclease IV
YP_004501788.1	TIGRFAM: Phosphotransferase system, fructose IIC component; Phosphotransferase system, fructose-specific IIB subunit; KEGG: spe:Spro_3228 PTS system fructose-specific transporter subunits IIBC; PFAM: Phosphotransferase system, fructose-specific IIB subunit; Phosphotransferase system, EIIC
YP_004501789.1	TIGRFAM: 1-phosphofructokinase; 1-phosphofructokinase; KEGG: spe:Spro_3229 1-phosphofructokinase; PFAM: Carbohydrate/purine kinase
YP_004501790.1	KEGG: spe:Spro_3230 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; Phosphotransferase system, phosphocarrier HPr protein
YP_004501791.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_3231 NUDIX hydrolase
YP_004501792.1	PFAM: NapC/NirT cytochrome c, N-terminal; KEGG: spe:Spro_3232 NapC/NirT cytochrome c domain-containing protein
YP_004501793.1	TIGRFAM: Molybdopterin guanine dinucleotide-containing S/N-oxide reductase; Twin-arginine translocation pathway, signal sequence; KEGG: spe:Spro_3233 molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004501794.1	KEGG: spe:Spro_3234 sugar efflux transporter; TIGRFAM: Sugar efflux; PFAM: Major facilitator superfamily MFS-1
YP_004501795.1	PFAM: Uncharacterised protein family UPF0153; KEGG: spe:Spro_3235 hypothetical protein
YP_004501796.1	KEGG: spe:Spro_3236 aromatic amino acid transporter; TIGRFAM: Tryptophan/tyrosine transporter; PFAM: Tryptophan/tyrosine permease
YP_004501797.1	TIGRFAM: Translation elongation factor P-like, YeiP; HAMAP: Translation elongation factor P-like, YeiP; KEGG: spe:Spro_3237 elongation factor P-like protein YeiP; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central
YP_004501798.1	PFAM: Mannonate dehydratase; TIGRFAM: Mannonate dehydratase; HAMAP: Mannonate dehydratase; KEGG: spe:Spro_3238 mannonate dehydratase
YP_004501799.1	KEGG: spe:Spro_3239 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal
YP_004501800.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_3240 hypothetical protein
YP_004501801.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; KEGG: spe:Spro_3241 cobalamin synthesis protein P47K
YP_004501802.1	KEGG: spe:Spro_3242 PA-phosphatase-like phosphoesterase; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004501803.1	PFAM: NLP/P60; KEGG: spe:Spro_3244 putative outer membrane lipoprotein
YP_004501804.1	KEGG: spe:Spro_3245 hypothetical protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004501805.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_3246 extracellular solute-binding protein
YP_004501806.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3247 binding-protein-dependent transport systems inner membrane component
YP_004501807.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3248 binding-protein-dependent transport systems inner membrane component
YP_004501808.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3249 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004501809.1	KEGG: spe:Spro_3250 hypothetical protein
YP_004501810.1	KEGG: spe:Spro_3251 bicyclomycin/multidrug efflux system; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004501811.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_3252 16S rRNA pseudouridylate synthase A; SMART: RNA-binding S4
YP_004501812.1	KEGG: spe:Spro_3253 type III restriction protein res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004501813.1	KEGG: spe:Spro_3254 50S ribosomal protein L25; HAMAP: 50S ribosomal protein L25; PFAM: Ribosomal protein L25, N-terminal
YP_004501814.1	KEGG: spe:Spro_3255 nucleoid-associated protein NdpA; HAMAP: Nucleoid-associated protein ndpA; PFAM: 37kDa nucleoid-associated bacterial protein
YP_004501815.1	KEGG: spe:Spro_3256 hypothetical protein; HAMAP: Uncharacterised protein family UPF0352; PFAM: Uncharacterised protein family UPF0352
YP_004501816.1	PFAM: Sulfatase; KEGG: spe:Spro_3257 sulfatase
YP_004501817.1	PFAM: DNA damage-inducible protein DinI-like; KEGG: ctu:Ctu_26810 virulence protein MsgA
YP_004501820.1	PFAM: Prophage tail fibre N-terminal; Lipase, GDSL; Carbohydrate-binding, CenC-like; KEGG: eoi:ECO111_2394 putative side tail fiber protein
YP_004501821.1	PFAM: Protein of unknown function DUF1983; KEGG: xbo:XBJ1_3931 putative phage host specificity protein
YP_004501822.1	PFAM: Bacteriophage lambda tail assembly I; KEGG: xbo:XBJ1_1280 putative bacteriophage protein
YP_004501823.1	manually curated; KEGG: yen:YE2300 hypothetical protein
YP_004501824.1	KEGG: xbo:XBJ1_3935 putative phage minor tail protein; PFAM: NLP/P60; SMART: Mov34/MPN/PAD-1
YP_004501825.1	KEGG: xbo:XBJ1_1278 hypothetical protein; TIGRFAM: Phage minor tail protein L; PFAM: Phage minor tail protein L
YP_004501826.1	PFAM: Phage minor tail; KEGG: xbo:XBJ1_3938 GP17
YP_004501827.1	KEGG: enc:ECL_01710 GP16; TIGRFAM: Phage tail tape measure protein; PFAM: Phage tail tape measure protein, conserved region; Prophage tail length tape measure
YP_004501828.1	manually curated; TIGRFAM: Minor tail T; KEGG: stm:STM2595 minor tail-like protein; PFAM: Minor tail T
YP_004501829.1	KEGG: sbo:SBO_1631 tail component of prophage; TIGRFAM: Phage minor tail protein G; PFAM: Phage minor tail protein G
YP_004501830.1	KEGG: enc:ECL_01707 GP13; PFAM: Bacterial Ig-like, group 2; SMART: Bacterial Ig-like, group 2
YP_004501831.1	PFAM: Phage minor tail U; KEGG: rah:Rahaq_4516 minor tail U
YP_004501832.1	PFAM: Prophage minor tail Z; KEGG: rah:Rahaq_4517 prophage minor tail Z family protein
YP_004501833.1	manually curated; KEGG: rah:Rahaq_4518 hypothetical protein
YP_004501834.1	PFAM: Uncharacterised conserved protein UCP030771; KEGG: esc:Entcl_1868 hypothetical protein
YP_004501835.1	PFAM: Peptidase S14, ClpP; KEGG: esc:Entcl_1867 peptidase S14 ClpP
YP_004501836.1	KEGG: rah:Rahaq_4521 phage portal protein, lambda family; TIGRFAM: Phage portal protein, lambda; PFAM: Phage portal protein, lambda
YP_004501837.1	KEGG: rah:Rahaq_4522 hypothetical protein
YP_004501838.1	PFAM: Phage terminase GpA; KEGG: rah:Rahaq_4523 terminase GpA
YP_004501839.1	PFAM: Protein of unknown function DUF1441; KEGG: sew:SeSA_A0691 hypothetical protein
YP_004501840.1	KEGG: kva:Kvar_2099 hypothetical protein
YP_004501841.1	PFAM: DNA polymerase III-theta, bacterial; KEGG: spe:Spro_2040 DNA polymerase II subunit beta
YP_004501843.1	KEGG: epy:EpC_17600 hypothetical protein
YP_004501844.1	KEGG: eci:UTI89_C0932 putative endolysin
YP_004501845.1	PFAM: Protein of unknown function DUF754; KEGG: esa:ESA_01018 hypothetical protein
YP_004501846.1	manually curated; KEGG: spe:Spro_4930 putative phage-related transmembrane protein
YP_004501847.1	PFAM: Antitermination protein; KEGG: rah:Rahaq_4534 antitermination protein
YP_004501848.1	KEGG: epy:EpC_20670 hypothetical protein
YP_004501849.1	PFAM: DNA methylase, C-5 cytosine-specific; KEGG: rah:Rahaq_1788 C-5 cytosine-specific DNA methylase
YP_004501850.1	KEGG: yps:YPTB1798 hypothetical protein; TIGRFAM: DNA N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase
YP_004501851.1	KEGG: xbo:XBJ1_2077 hypothetical protein
YP_004501852.1	KEGG: epy:EpC_20700 phage O protein family
YP_004501854.1	PFAM: Phage regulatory protein, Rha-like; Phage antirepressor protein; KEGG: cro:ROD_26191 hypothetical protein
YP_004501855.1	KEGG: epy:EpC_20730 hypothetical protein
YP_004501856.1	KEGG: epy:EpC_20740 hypothetical protein
YP_004501857.1	KEGG: yen:YE2350 repressor protein CI; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004501858.1	KEGG: rah:Rahaq_1781 hypothetical protein
YP_004501859.1	KEGG: sew:SeSA_A4443 hypothetical protein
YP_004501860.1	PFAM: Protein of unknown function DUF2303; KEGG: epy:EpC_20800 hypothetical protein
YP_004501861.1	KEGG: cro:ROD_26251 hypothetical protein
YP_004501863.1	KEGG: ctu:Ctu_11210 hypothetical protein
YP_004501864.1	KEGG: psp:PSPPH_2388 hypothetical protein
YP_004501865.1	KEGG: ypb:YPTS_3265 phage-like protein
YP_004501866.1	PFAM: Protein of unknown function DUF551; KEGG: ecz:ECS88_4998 hypothetical protein
YP_004501867.1	KEGG: set:SEN1965 phage protein
YP_004501868.1	KEGG: plu:plu2946 hypothetical protein
YP_004501869.1	KEGG: plu:plu2947 hypothetical protein
YP_004501871.1	PFAM: Acyltransferase 3; KEGG: pam:PANA_2174 BcsY
YP_004501872.1	PFAM: SmpA/OmlA; KEGG: spe:Spro_3258 DNA-binding transcriptional activator OsmE
YP_004501873.1	PFAM: PepSY-associated TM helix; KEGG: psb:Psyr_2687 PepSY-associated TM helix
YP_004501874.1	KEGG: pfo:Pfl01_0597 hypothetical protein
YP_004501875.1	PFAM: Protein of unknown function DUF1348; KEGG: spe:Spro_3261 hypothetical protein
YP_004501876.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_3262 TetR family transcriptional regulator
YP_004501877.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3263 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004501878.1	PFAM: Porin, Gram-negative type; KEGG: spe:Spro_3264 outer membrane porin protein C
YP_004501879.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3265 major facilitator transporter
YP_004501880.1	KEGG: spe:Spro_3266 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like
YP_004501881.1	KEGG: spe:Spro_3267 transcriptional regulator RcsB; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004501882.1	manually curated; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal; Signal transduction response regulator, receiver region; KEGG: spe:Spro_3268 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004501883.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: spe:Spro_3269 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004501884.1	PFAM: Methyltransferase type 11; TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; HAMAP: 3-demethylubiquinone-9 3-methyltransferase; KEGG: spe:Spro_3270 3-demethylubiquinone-9 3-methyltransferase
YP_004501885.1	KEGG: spe:Spro_3271 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone
YP_004501886.1	KEGG: spe:Spro_3272 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_004501887.1	PFAM: Ferredoxin; KEGG: spe:Spro_3273 2Fe-2S ferredoxin YfaE
YP_004501888.1	PFAM: Hok/gef cell toxic protein; KEGG: spe:Spro_3274 Hok/gef cell toxic protein
YP_004501889.1	KEGG: spe:Spro_3275 competence damage-inducible protein A; TIGRFAM: Competence-induced protein CinA; Molybdenum cofactor synthesis; PFAM: Molybdopterin binding
YP_004501890.1	KEGG: spe:Spro_3276 aromatic amino acid transporter; TIGRFAM: Tryptophan/tyrosine transporter; PFAM: Tryptophan/tyrosine permease
YP_004501891.1	PFAM: YfaZ; KEGG: spe:Spro_3277 YfaZ family protein
YP_004501892.1	KEGG: spe:Spro_3278 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive
YP_004501893.1	TIGRFAM: O-succinylbenzoate-CoA ligase; KEGG: spe:Spro_3279 O-succinylbenzoic acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004501894.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: O-succinylbenzoic acid (OSB) synthetase, gamma proteobacteria/archaea; KEGG: spe:Spro_3280 O-succinylbenzoate synthase; HAMAP: o-succinylbenzoate synthase
YP_004501895.1	TIGRFAM: Naphthoate synthase; KEGG: spe:Spro_3281 naphthoate synthase; PFAM: Crotonase, core
YP_004501896.1	PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; KEGG: spe:Spro_3282 acyl-CoA thioester hydrolase YfbB; HAMAP: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
YP_004501897.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; TIGRFAM: Menaquinone biosynthesis protein MenD; KEGG: spe:Spro_3283 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD
YP_004501898.1	TIGRFAM: Isochorismate synthase; KEGG: spe:Spro_3284 isochorismate synthase; PFAM: Chorismate binding, C-terminal
YP_004501899.1	PFAM: Glycosyltransferase 36; Putative carbohydrate binding; Glycosyltransferase 36 associated; KEGG: spe:Spro_3285 glycosyltransferase 36
YP_004501900.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: spe:Spro_3286 hypothetical protein
YP_004501901.1	KEGG: spe:Spro_3287 L-idonate 5-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004501902.1	KEGG: spe:Spro_3288 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004501903.1	KEGG: spe:Spro_3289 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004501904.1	PFAM: Protein of unknown function DUF1097; KEGG: spe:Spro_3290 hypothetical protein
YP_004501905.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3291 major facilitator transporter
YP_004501906.1	KEGG: abn:AB57_0216 hypothetical protein
YP_004501907.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_3292 hypothetical protein
YP_004501908.1	KEGG: spe:Spro_3293 cupin 2 domain-containing protein
YP_004501909.1	KEGG: spe:Spro_3294 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region
YP_004501910.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3295 LysR family transcriptional regulator
YP_004501911.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; TIGRFAM: NADH-quinone oxidoreductase, chain N; HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; KEGG: spe:Spro_3296 NADH dehydrogenase subunit N
YP_004501912.1	TIGRFAM: NADH-quinone oxidoreductase, chain M; KEGG: spe:Spro_3297 NADH dehydrogenase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004501913.1	TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: spe:Spro_3298 NADH dehydrogenase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
YP_004501914.1	KEGG: spe:Spro_3299 NADH dehydrogenase subunit K; HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L
YP_004501915.1	KEGG: spe:Spro_3300 NADH dehydrogenase subunit J; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
YP_004501916.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: spe:Spro_3301 NADH dehydrogenase subunit I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004501917.1	HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; KEGG: spe:Spro_3302 NADH dehydrogenase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1
YP_004501918.1	TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: spe:Spro_3303 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004501919.1	TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: spe:Spro_3304 NADH dehydrogenase I subunit F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004501920.1	TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: spe:Spro_3305 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit
YP_004501921.1	TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; HAMAP: NAD(P)H-quinone oxidoreductase subunit J; KEGG: spe:Spro_3306 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; PFAM: NADH-quinone oxidoreductase, subunit D; NADH:ubiquinone oxidoreductase, 30kDa subunit
YP_004501922.1	PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; KEGG: spe:Spro_3307 NADH dehydrogenase subunit B
YP_004501923.1	KEGG: spe:Spro_3308 NADH dehydrogenase subunit A; HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004501925.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3309 LysR family transcriptional regulator
YP_004501926.1	KEGG: spe:Spro_3310 aminotransferase AlaT; PFAM: Aminotransferase, class I/II
YP_004501927.1	SMART: Metal-dependent phosphohydrolase, HD region; HAMAP: UPF0207 protein yfbR; KEGG: spe:Spro_3311 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain
YP_004501928.1	PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; KEGG: spe:Spro_3312 citrate transporter
YP_004501929.1	KEGG: spe:Spro_3313 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004501930.1	KEGG: spe:Spro_3314 hypothetical protein; HAMAP: YfbU; PFAM: YfbU
YP_004501931.1	KEGG: spe:Spro_3315 hypothetical protein; HAMAP: UPF0208 membrane protein yfbV; PFAM: Uncharacterised protein family UPF0208
YP_004501932.1	PFAM: Acetate/butyrate kinase; TIGRFAM: Acetate kinase; HAMAP: Acetate kinase; KEGG: spe:Spro_3316 acetate kinase
YP_004501933.1	TIGRFAM: Phosphate acetyltransferase; KEGG: spe:Spro_3317 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; DRTGG
YP_004501934.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_3318 NUDIX hydrolase
YP_004501935.1	KEGG: spe:Spro_3319 phosphodiesterase; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase
YP_004501936.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: spe:Spro_3320 glutathione S-transferase domain-containing protein
YP_004501937.1	KEGG: spe:Spro_3321 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; TIGRFAM: Dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase
YP_004501938.1	PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3322 hypothetical protein
YP_004501939.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3323 histidine/lysine/arginine/ornithine transporter subunit; SMART: ATPase, AAA+ type, core
YP_004501940.1	KEGG: spe:Spro_3324 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004501941.1	KEGG: spe:Spro_3325 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004501942.1	TIGRFAM: Lysine-arginine-ornithine-binding periplasmic protein; PFAM: Extracellular solute-binding protein, family 3; KEGG: spe:Spro_3326 cationic amino acid ABC transporter periplasmic binding protein; SMART: Extracellular solute-binding protein, family 3
YP_004501943.1	KEGG: spe:Spro_3327 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein
YP_004501944.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: spe:Spro_3328 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase
YP_004501945.1	PFAM: Colicin V production protein; KEGG: spe:Spro_3329 colicin V production protein
YP_004501946.1	PFAM: Sporulation/cell division region, bacteria; KEGG: spe:Spro_3330 hypothetical protein
YP_004501947.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: spe:Spro_3331 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004501948.1	PFAM: Carboxyl transferase; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; KEGG: spe:Spro_3332 acetyl-CoA carboxylase subunit beta
YP_004501949.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_3333 hypothetical protein
YP_004501950.1	PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; TIGRFAM: Pseudouridine synthase I, TruA; HAMAP: Pseudouridine synthase I, TruA; KEGG: spe:Spro_3334 tRNA pseudouridine synthase A
YP_004501951.1	KEGG: spe:Spro_3335 putative semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding
YP_004501952.1	HAMAP: Erythronate-4-phosphate dehydrogenase; KEGG: spe:Spro_3336 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_004501953.1	KEGG: spe:Spro_3337 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004501954.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_3338 hypothetical protein
YP_004501955.1	KEGG: spe:Spro_3339 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004501956.1	KEGG: spe:Spro_3340 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004501957.1	KEGG: spe:Spro_3341 hypothetical protein
YP_004501958.1	KEGG: spe:Spro_3342 hypothetical protein
YP_004501959.1	KEGG: spe:Spro_3343 tricarboxylic transport
YP_004501960.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: spe:Spro_3344 hypothetical protein
YP_004501961.1	KEGG: spe:Spro_3345 hexapaptide repeat-containing transferase
YP_004501962.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_3346 hypothetical protein
YP_004501963.1	PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; KEGG: spe:Spro_3347 transcriptional regulator; SMART: HTH transcriptional regulator, GntR
YP_004501964.1	PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: spe:Spro_3348 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004501965.1	PFAM: DSBA oxidoreductase; KEGG: spe:Spro_3349 DsbA oxidoreductase
YP_004501966.1	KEGG: spe:Spro_3350 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region
YP_004501967.1	KEGG: spe:Spro_3351 putative metal resistance protein
YP_004501968.1	KEGG: spe:Spro_3352 flagella biosynthesis regulator
YP_004501969.1	KEGG: eta:ETA_11640 probable rhodanese-related sulfurtransferase; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004501970.1	KEGG: rah:Rahaq_1221 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004501971.1	PFAM: Major facilitator superfamily MFS-1; KEGG: cro:ROD_27341 major facilitator superfamily protein
YP_004501972.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: spe:Spro_3358 endonuclease/exonuclease/phosphatase
YP_004501973.1	TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; KEGG: spe:Spro_3359 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20
YP_004501974.1	PFAM: Divalent ion symporter; KEGG: spe:Spro_3360 citrate transporter
YP_004501975.1	PFAM: ApbE-like lipoprotein; KEGG: spe:Spro_3361 thiamine biosynthesis lipoprotein ApbE
YP_004501976.1	KEGG: spe:Spro_3367 putative outer membrane lipoprotein
YP_004501977.1	KEGG: spe:Spro_3368 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004501978.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; HAMAP: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC; KEGG: spe:Spro_3369 5-methylaminomethyl-2-thiouridine methyltransferase; PFAM: Protein of unknown function DUF752; FAD dependent oxidoreductase
YP_004501979.1	PFAM: Uncharacterised protein family YfcL; KEGG: spe:Spro_3370 YfcL protein
YP_004501980.1	PFAM: Protein of unknown function DUF462; KEGG: spe:Spro_3371 hypothetical protein
YP_004501981.1	PFAM: Protein of unknown function DUF81; KEGG: spe:Spro_3372 hypothetical protein
YP_004501982.1	KEGG: spe:Spro_3373 penicillin-insensitive murein endopeptidase; manually curated; PFAM: Peptidase M74, penicillin-insensitive murein endopeptidase
YP_004501983.1	TIGRFAM: Chorismate synthase; KEGG: spe:Spro_3374 chorismate synthase; PFAM: Chorismate synthase
YP_004501984.1	TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: spe:Spro_3375 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small
YP_004501985.1	HAMAP: UPF0115 protein yfcN; PFAM: Smr protein/MutS2 C-terminal; KEGG: spe:Spro_3376 hypothetical protein; SMART: Smr protein/MutS2 C-terminal
YP_004501986.1	manually curated; TIGRFAM: Phosphohistidine phosphatase SixA, subgroup; KEGG: spe:Spro_3377 phosphohistidine phosphatase; PFAM: Phosphoglycerate mutase
YP_004501987.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; TIGRFAM: Fatty oxidation complex, alpha subunit FadJ; HAMAP: Fatty oxidation complex, alpha subunit FadJ; KEGG: spe:Spro_3378 multifunctional fatty acid oxidation complex subunit alpha
YP_004501988.1	TIGRFAM: Acetyl-CoA C-acyltransferase FadI; Thiolase; HAMAP: Acetyl-CoA C-acyltransferase FadI; KEGG: spe:Spro_3379 3-ketoacyl-CoA thiolase
YP_004501989.1	KEGG: spe:Spro_3380 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00743; PFAM: Conserved hypothetical protein CHP00743
YP_004501990.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: spe:Spro_3381 long-chain fatty acid outer membrane transporter
YP_004501991.1	PFAM: VacJ-like lipoprotein; KEGG: spe:Spro_3382 VacJ family lipoprotein
YP_004501992.1	TIGRFAM: Cytochrome c-type biogenesis protein CcmI; KEGG: spe:Spro_3383 TPR repeat-containing protein
YP_004501993.1	PFAM: Cytochrome C biogenesis protein CcmH; KEGG: spe:Spro_3384 cytochrome c biogenesis protein
YP_004501994.1	KEGG: spe:Spro_3385 periplasmic protein thiol--disulfide oxidoreductase DsbE; TIGRFAM: Periplasmic protein thiol:disulphide oxidoreductase DsbE; PFAM: Redoxin
YP_004501995.1	KEGG: spe:Spro_3386 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein
YP_004501996.1	KEGG: spe:Spro_3387 cytochrome c-type biogenesis protein CcmE; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein
YP_004501997.1	KEGG: spe:Spro_3388 heme exporter protein CcmD; TIGRFAM: Haem exporter protein D (CcmD); PFAM: Haem exporter protein D (CcmD)
YP_004501998.1	KEGG: spe:Spro_3389 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein
YP_004501999.1	KEGG: spe:Spro_3390 heme exporter protein CcmB; TIGRFAM: Cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB
YP_004502000.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, haem export, CcmA; KEGG: spe:Spro_3391 cytochrome c biogenesis protein CcmA; PFAM: ABC transporter-like
YP_004502001.1	PFAM: Formate/nitrite transporter; KEGG: spe:Spro_3392 hypothetical protein
YP_004502002.1	KEGG: spe:Spro_3394 DNA-binding transcriptional regulator DsdC; TIGRFAM: D-serine deaminase transcriptional activator; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding
YP_004502003.1	PFAM: Protein of unknown function DUF6, transmembrane; KEGG: spe:Spro_3396 hypothetical protein
YP_004502004.1	KEGG: spe:Spro_3397 hypothetical protein
YP_004502005.1	KEGG: spe:Spro_3398 putative outer membrane protein
YP_004502006.1	TIGRFAM: Lytic murein transglycosylase B; KEGG: spe:Spro_3399 murein hydrolase B
YP_004502007.1	PFAM: Protein of unknown function DUF805; KEGG: pay:PAU_01746 hypothetical protein
YP_004502008.1	KEGG: spe:Spro_3400 hypothetical protein
YP_004502010.1	KEGG: yen:YE1232 putative B-type cytochrome
YP_004502011.1	KEGG: spe:Spro_3401 aminotransferase; PFAM: Aminotransferase, class I/II
YP_004502012.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3402 GCN5-related N-acetyltransferase
YP_004502013.1	PFAM: Protein of unknown function DUF1479; KEGG: spe:Spro_3403 hypothetical protein
YP_004502014.1	KEGG: spe:Spro_3404 signal transduction histidine kinase LytS; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like
YP_004502015.1	KEGG: spe:Spro_3405 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region
YP_004502016.1	PFAM: Protein of unknown function DUF2502; KEGG: rah:Rahaq_2994 hypothetical protein
YP_004502017.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3406 major facilitator transporter
YP_004502018.1	PFAM: Glucokinase; TIGRFAM: Glucokinase; HAMAP: Glucokinase; KEGG: spe:Spro_3407 glucokinase
YP_004502019.1	PFAM: Chloride channel, voltage gated; KEGG: spe:Spro_3408 hypothetical protein
YP_004502020.1	KEGG: spe:Spro_3409 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004502021.1	PFAM: Transmembrane pair, bacterial; KEGG: spe:Spro_3410 transmembrane pair domain-containing protein
YP_004502022.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3411 LysR family transcriptional regulator
YP_004502023.1	KEGG: spe:Spro_3412 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004502024.1	PFAM: Aldo/keto reductase; KEGG: spe:Spro_3413 aldo/keto reductase
YP_004502025.1	PFAM: Protein of unknown function DUF2502; KEGG: spe:Spro_3414 hypothetical protein
YP_004502026.1	TIGRFAM: Natural resistance-associated macrophage protein; HAMAP: Manganese transport protein mntH; KEGG: spe:Spro_3415 manganese transport protein MntH; PFAM: Natural resistance-associated macrophage protein
YP_004502027.1	KEGG: spe:Spro_3416 nucleoside transporter; TIGRFAM: Concentrative nucleoside transporter, metazoan/bacterial; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition
YP_004502028.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: spe:Spro_3417 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004502029.1	KEGG: spe:Spro_3418 2,3-dihydroxybenzoate-2,3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502030.1	KEGG: spe:Spro_3419 isochorismatase; PFAM: Isochorismatase-like; Phosphopantetheine-binding
YP_004502031.1	TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; KEGG: spe:Spro_3420 enterobactin synthase subunit E; PFAM: AMP-dependent synthetase/ligase
YP_004502032.1	TIGRFAM: Isochorismate synthase; KEGG: spe:Spro_3421 isochorismate synthase; PFAM: Chorismate binding, C-terminal
YP_004502033.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_3422 iron-enterobactin transporter periplasmic binding protein
YP_004502034.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3423 enterobactin exporter EntS
YP_004502035.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein
YP_004502036.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_3425 iron-enterobactin transporter permease
YP_004502037.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3426 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502038.1	TIGRFAM: Amino acid adenylation; KEGG: spe:Spro_3427 enterobactin synthase subunit F; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase
YP_004502039.1	PFAM: MbtH-like protein; KEGG: spe:Spro_3428 MbtH domain-containing protein
YP_004502040.1	PFAM: Putative esterase; KEGG: spe:Spro_3429 enterobactin/ferric enterobactin esterase
YP_004502041.1	KEGG: spe:Spro_3430 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004502042.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: spe:Spro_3431 extracellular solute-binding protein
YP_004502043.1	TIGRFAM: Acetolactate synthase, catabolic; KEGG: spe:Spro_3432 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004502044.1	TIGRFAM: Alpha-acetolactate decarboxylase; KEGG: spe:Spro_3433 acetolactate decarboxylase; PFAM: Alpha-acetolactate decarboxylase
YP_004502045.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3434 LysR family transcriptional regulator
YP_004502046.1	KEGG: spe:Spro_3435 ethanolamine ammonia-lyase; PFAM: Ethanolamine ammonia-lyase light chain
YP_004502047.1	KEGG: spe:Spro_3436 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit
YP_004502048.1	PFAM: Protein of unknown function DUF925, bacterial; KEGG: spe:Spro_3437 hypothetical protein
YP_004502049.1	KEGG: spe:Spro_3438 hypothetical protein
YP_004502050.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3441 LysR family transcriptional regulator
YP_004502051.1	PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_3442 bile acid:sodium symporter
YP_004502052.1	KEGG: spe:Spro_3443 hypothetical protein
YP_004502053.1	KEGG: spe:Spro_3444 NAD-dependent DNA ligase LigA; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; Helix-hairpin-helix motif; BRCT; TIGRFAM: NAD-dependent DNA ligase; HAMAP: DNA ligase; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT
YP_004502054.1	SMART: ZipA, C-terminal FtsZ-binding region; TIGRFAM: Cell division protein ZipA; KEGG: spe:Spro_3445 cell division protein ZipA; HAMAP: Cell division protein zipA-like protein; PFAM: ZipA, C-terminal FtsZ-binding region
YP_004502055.1	PFAM: Protein of unknown function DUF540; KEGG: spe:Spro_3446 putative sulfate transport protein CysZ
YP_004502056.1	TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; KEGG: spe:Spro_3447 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004502057.1	KEGG: spe:Spro_3448 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_004502058.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: spe:Spro_3449 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region
YP_004502059.1	manually curated; TIGRFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain; KEGG: spe:Spro_3450 PTS system glucose-specific transporter subunit; PFAM: Phosphotransferase system, sugar-specific permease EIIA 1 domain
YP_004502060.1	PFAM: Sulfotransferase; KEGG: pla:Plav_2304 sulfotransferase
YP_004502061.1	KEGG: spe:Spro_3451 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004502062.1	KEGG: spe:Spro_3452 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004502063.1	KEGG: yps:YPTB2720 HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004502064.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: yen:YE1199 putative ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004502065.1	TIGRFAM: Cysteine synthase B; Cysteine synthase K/M; KEGG: spe:Spro_3453 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004502066.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: spe:Spro_3454 sulfate/thiosulfate transporter subunit; PFAM: ABC transporter-like
YP_004502067.1	KEGG: spe:Spro_3455 sulfate/thiosulfate transporter permease subunit; TIGRFAM: Sulphate ABC transporter permease protein 2; Sulphate ABC transporter, permease protein CysW; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004502068.1	KEGG: spe:Spro_3456 sulfate/thiosulfate transporter subunit; TIGRFAM: Sulphate ABC transporter permease protein 2; Sulphate ABC transporter, permease protein CysT; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004502069.1	KEGG: spe:Spro_3457 thiosulfate transporter subunit; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004502070.1	KEGG: spe:Spro_3458 Dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase
YP_004502071.1	PFAM: Protein of unknown function DUF1131; KEGG: spe:Spro_3459 hypothetical protein
YP_004502072.1	KEGG: spe:Spro_3460 hypothetical protein
YP_004502073.1	KEGG: spe:Spro_3461 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00156; PFAM: Protein of unknown function DUF388, OB-fold
YP_004502074.1	KEGG: spe:Spro_3462 putative acetyltransferase; HAMAP: Acetyltransferase ypeA; PFAM: GCN5-related N-acetyltransferase
YP_004502075.1	KEGG: spe:Spro_3463 N-acetylmuramoyl-L-alanine amidase I; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic
YP_004502076.1	HAMAP: Coproporphyrinogen-III oxidase, aerobic; KEGG: spe:Spro_3464 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase
YP_004502077.1	KEGG: spe:Spro_3465 hypothetical protein; HAMAP: Protein of unknown function DUF188; PFAM: Protein of unknown function DUF188
YP_004502078.1	PFAM: Protein of unknown function DUF399; KEGG: spe:Spro_3469 hypothetical protein
YP_004502079.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_3470 S-methylmethionine transporter
YP_004502080.1	KEGG: spe:Spro_3471 homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase
YP_004502081.1	PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: spe:Spro_3472 malic enzyme
YP_004502082.1	KEGG: spe:Spro_3473 hypothetical protein
YP_004502083.1	KEGG: spe:Spro_3474 putative phagelysin
YP_004502084.1	KEGG: spe:Spro_3475 phage holin; TIGRFAM: Holin, phage lambda; PFAM: Holin, phage lambda
YP_004502085.1	PFAM: Glycoside hydrolase, family 18, catalytic domain; Carbohydrate-binding domain, family 5/12; KEGG: spe:Spro_3476 chitinase; SMART: Chitinase II; Carbohydrate-binding domain, family 5/12
YP_004502086.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spe:Spro_3477 LysR family transcriptional regulator
YP_004502087.1	PFAM: Chitin-binding, domain 3; KEGG: spe:Spro_3478 chitin-binding domain-containing protein
YP_004502088.1	TIGRFAM: Transaldolase AB; HAMAP: Transaldolase; KEGG: spe:Spro_3479 transaldolase A; PFAM: Transaldolase
YP_004502089.1	TIGRFAM: Transketolase, bacterial-like; KEGG: spe:Spro_3480 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004502090.1	KEGG: spe:Spro_3483 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain
YP_004502091.1	KEGG: spe:Spro_3484 cytochrome c-type protein NapC; TIGRFAM: Periplasmic nitrate reductase c-type cytochrome, NapC/NirT; PFAM: NapC/NirT cytochrome c, N-terminal
YP_004502092.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: spe:Spro_3485 citrate reductase cytochrome c-type subunit
YP_004502093.1	PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; TIGRFAM: Nitrate reductase, large subunit, periplasmic; Twin-arginine translocation pathway, signal sequence; HAMAP: Nitrate reductase, large subunit, periplasmic; KEGG: spe:Spro_3486 nitrate reductase catalytic subunit
YP_004502094.1	PFAM: NapD; KEGG: spe:Spro_3487 assembly protein for periplasmic nitrate reductase
YP_004502095.1	KEGG: spe:Spro_3488 ferredoxin-type protein NapF; TIGRFAM: Ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup
YP_004502096.1	KEGG: spe:Spro_3489 nitrate/nitrite sensor protein NarQ; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; HAMP linker domain
YP_004502097.1	KEGG: spe:Spro_3490 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal
YP_004502098.1	PFAM: Uncharacterised conserved protein UCP037266; KEGG: spe:Spro_3491 hypothetical protein
YP_004502099.1	KEGG: yen:YE1151 aminoglycoside/multidrug efflux system; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004502100.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: spe:Spro_3494 TonB-dependent receptor
YP_004502101.1	KEGG: spe:Spro_3495 putative receptor
YP_004502102.1	KEGG: spe:Spro_3496 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004502103.1	KEGG: spe:Spro_3497 hypothetical protein
YP_004502104.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3498 GCN5-related N-acetyltransferase
YP_004502105.1	PFAM: Chorismate mutase, type II; KEGG: pfl:PFL_0353 isochorismate-pyruvate lyase
YP_004502106.1	KEGG: vfm:VFMJ11_A0648 acetyltransferase, GNAT family
YP_004502107.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3499 GCN5-related N-acetyltransferase
YP_004502108.1	KEGG: spe:Spro_3500 hypothetical protein; TIGRFAM: Conserved hypothetical protein, ArsC related; PFAM: Arsenate reductase-like
YP_004502109.1	TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: spe:Spro_3501 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004502110.1	PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: spe:Spro_3502 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin
YP_004502111.1	HAMAP: UPF0370 protein ypfN; KEGG: spe:Spro_3503 hypothetical protein
YP_004502112.1	KEGG: pmy:Pmen_0655 transglutaminase domain-containing protein; PFAM: Protein of unknown function DUF2126; Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like
YP_004502113.1	PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; Protein of unknown function DUF403, bacteria; KEGG: app:CAP2UW1_4069 hypothetical protein
YP_004502114.1	KEGG: mei:Msip34_0340 transglutaminase domain protein; PFAM: Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like
YP_004502115.1	PFAM: Phospholipase/carboxylesterase; KEGG: spe:Spro_3504 esterase YpfH
YP_004502116.1	KEGG: spe:Spro_3505 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF699, ATPase putative; GCN5-related N-acetyltransferase
YP_004502117.1	PFAM: Protein of unknown function, zinc metallopeptidase putative; KEGG: spe:Spro_3506 hypothetical protein
YP_004502118.1	PFAM: SAICAR synthetase; TIGRFAM: SAICAR synthetase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: spe:Spro_3507 phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_004502119.1	PFAM: NlpBDapX lipoprotein; KEGG: spe:Spro_3508 lipoprotein
YP_004502120.1	PFAM: Dihydrodipicolinate synthetase; TIGRFAM: Dihydrodipicolinate synthase subfamily; HAMAP: Dihydrodipicolinate synthase; KEGG: spe:Spro_3509 dihydrodipicolinate synthase
YP_004502121.1	PFAM: Amino acid-binding ACT; KEGG: spe:Spro_3510 glycine cleavage system transcriptional repressor
YP_004502122.1	KEGG: spe:Spro_3511 thioredoxin-dependent thiol peroxidase; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004502123.1	PFAM: Uncharacterised protein family UPF0118; KEGG: spe:Spro_3512 hypothetical protein
YP_004502124.1	KEGG: kpn:KPN_01826 hypothetical protein
YP_004502125.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: esc:Entcl_3036 molybdopterin biosynthesis MoaE protein
YP_004502126.1	KEGG: sea:SeAg_B0840 molybdopterin synthase small subunit; TIGRFAM: Molybdopterin converting factor, subunit 1; PFAM: ThiamineS
YP_004502127.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: ebi:EbC_13450 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004502128.1	PFAM: Protein of unknown function DUF2474; KEGG: ddc:Dd586_2475 hypothetical protein
YP_004502129.1	KEGG: cko:CKO_01228 hypothetical protein; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II
YP_004502130.1	PFAM: Cytochrome bd ubiquinol oxidase, subunit I; KEGG: cko:CKO_01227 hypothetical protein
YP_004502131.1	KEGG: api:100162283 similar to conserved hypothetical protein; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase
YP_004502132.1	TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; KEGG: enc:ECL_01530 hypothetical protein; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase
YP_004502133.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_3513 lysine exporter protein LysE/YggA
YP_004502134.1	KEGG: spe:Spro_3514 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004502136.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: spe:Spro_3515 FAD-dependent pyridine nucleotide-disulfide oxidoreductase
YP_004502137.1	KEGG: spe:Spro_3516 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2
YP_004502139.1	PFAM: Peptidase M48, Ste24p; KEGG: spe:Spro_3517 peptidase M48 Ste24p
YP_004502140.1	TIGRFAM: Arsenate reductase; KEGG: spe:Spro_3518 arsenate reductase; PFAM: Arsenate reductase-like
YP_004502141.1	KEGG: eay:EAM_0332 DNA-binding protein
YP_004502142.1	PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); manually curated; KEGG: yen:YE1130 DNA replication initiation factor; TIGRFAM: Chromosomal replication control, regulator Hda; HAMAP: DnaA-like protein hda
YP_004502143.1	KEGG: spe:Spro_3520 putative cell envelope integrity inner membrane protein TolA
YP_004502144.1	PFAM: Transglycosylase-associated protein; KEGG: spe:Spro_3521 hypothetical protein
YP_004502145.1	KEGG: spe:Spro_3522 uracil transporter; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004502146.1	KEGG: spe:Spro_3523 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004502147.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: spe:Spro_3524 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein
YP_004502148.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: spe:Spro_3525 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal
YP_004502149.1	PFAM: Plasmid stabilisation system; KEGG: spe:Spro_3526 addiction module antitoxin
YP_004502150.1	KEGG: spe:Spro_3527 hypothetical protein
YP_004502151.1	KEGG: spe:Spro_3528 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004502152.1	PFAM: Protein of unknown function DUF596; KEGG: kpe:KPK_A0225 hypothetical protein
YP_004502153.1	KEGG: kpe:KPK_A0227 hemagglutinin family protein
YP_004502154.1	KEGG: eay:EAM_2755 hypothetical protein
YP_004502155.1	KEGG: plu:plu3064 hypothetical protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Adhesin HecA 20-residue repeat x2; PFAM: Protein of unknown function DUF637, haemagglutinin/haemolysin putative; Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial
YP_004502156.1	PFAM: Polypeptide-transport-associated, ShlB-type; Haemolysin activator HlyB; KEGG: plu:plu3569 hypothetical protein
YP_004502157.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: spe:Spro_3538 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like
YP_004502158.1	KEGG: spe:Spro_3539 phosphate ABC transporter inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004502159.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3540 binding-protein-dependent transport systems inner membrane component
YP_004502160.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; HAMAP: Polyphosphate kinase; KEGG: spe:Spro_3541 polyphosphate kinase
YP_004502161.1	TIGRFAM: exopolyphosphatase; KEGG: spe:Spro_3542 exopolyphosphatase; PFAM: Ppx/GppA phosphatase
YP_004502162.1	KEGG: spe:Spro_3544 hypothetical protein
YP_004502163.1	KEGG: spe:Spro_3545 magnesium transporter; TIGRFAM: Divalent cation transporter; PFAM: Magnesium transporter, MgtE intracellular region; Cystathionine beta-synthase, core; MgtE integral membrane region
YP_004502164.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-3; PAS fold; MASE1; PAS fold-4; Diguanylate phosphodiesterase, predicted; KEGG: yen:YE1116 putative sensor protein; SMART: Diguanylate cyclase, predicted; PAS; PAC motif; Diguanylate phosphodiesterase, predicted
YP_004502165.1	PFAM: Transposase MuA/Repressor CI, DNA-binding; KEGG: spe:Spro_3546 MuA-transposase/repressor protein CI DNA-binding
YP_004502166.1	KEGG: spe:Spro_3547 AraC family transcriptional regulator; PFAM: Ada DNA repair, metal-binding; Helix-turn-helix, AraC type; AlkA, N-terminal; HhH-GPD domain; SMART: Helix-turn-helix, AraC domain; HhH-GPD domain
YP_004502167.1	KEGG: spe:Spro_3548 putative chaperone
YP_004502168.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3549 GCN5-related N-acetyltransferase
YP_004502169.1	PFAM: Chloramphenicol phosphotransferase-like; KEGG: spe:Spro_3550 kinase
YP_004502170.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: xne:XNC1_2253 pyridoxamine 5'-phosphate oxidase family protein
YP_004502171.1	PFAM: Aldo/keto reductase; KEGG: spe:Spro_3551 aldo/keto reductase
YP_004502172.1	KEGG: spe:Spro_3552 multidrug efflux system subunit MdtA; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004502173.1	KEGG: spe:Spro_3553 multidrug efflux system subunit MdtB; HAMAP: Multidrug resistance protein mdtB; PFAM: Acriflavin resistance protein
YP_004502174.1	KEGG: spe:Spro_3554 multidrug efflux system subunit MdtC; HAMAP: Multidrug resistance protein mdtC; PFAM: Acriflavin resistance protein
YP_004502175.1	KEGG: spe:Spro_3555 multidrug efflux system protein MdtE; HAMAP: multidrug resistance protein mdtD; PFAM: Major facilitator superfamily MFS-1
YP_004502176.1	KEGG: spe:Spro_3556 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004502177.1	KEGG: spe:Spro_3557 DNA-binding transcriptional regulator BaeR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004502179.1	PFAM: Protein of unknown function DUF1508; KEGG: spe:Spro_3560 hypothetical protein
YP_004502180.1	PFAM: Peptidase U32; KEGG: spe:Spro_3561 peptidase U32
YP_004502181.1	SMART: Diacylglycerol kinase, catalytic region; TIGRFAM: lipid kinase YegS; Conserved hypothetical protein CHP00147; KEGG: spe:Spro_3562 lipid kinase; HAMAP: lipid kinase yegS; PFAM: Diacylglycerol kinase, catalytic region
YP_004502182.1	KEGG: spe:Spro_3563 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004502183.1	KEGG: spe:Spro_3564 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding
YP_004502184.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3565 major facilitator transporter
YP_004502185.1	KEGG: spe:Spro_3566 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal
YP_004502186.1	KEGG: spe:Spro_3567 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004502187.1	PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: spe:Spro_3568 fructose-bisphosphate aldolase
YP_004502188.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: spe:Spro_3575 D-arabinose 5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_004502189.1	PFAM: Inhibitor of vertebrate lysozyme; KEGG: spe:Spro_3576 inhibitor of vertebrate lysozyme
YP_004502190.1	TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: spe:Spro_3577 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004502191.1	PFAM: Hydroxyethylthiazole kinase; TIGRFAM: hydroxyethylthiazole kinase; HAMAP: Hydroxyethylthiazole kinase; KEGG: spe:Spro_3578 hydroxyethylthiazole kinase
YP_004502192.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3579 GCN5-related N-acetyltransferase
YP_004502193.1	PFAM: Methyltransferase type 12; KEGG: pap:PSPA7_3251 hypothetical protein
YP_004502194.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3583 major facilitator transporter
YP_004502195.1	PFAM: Helix-turn-helix, HxlR type; KEGG: spe:Spro_3584 HxlR family transcriptional regulator
YP_004502196.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_3586 pseudouridine synthase; SMART: RNA-binding S4
YP_004502197.1	KEGG: spe:Spro_3587 outer membrane autotransporter; TIGRFAM: Outer membrane autotransporter barrel; PFAM: Autotransporter beta-domain
YP_004502198.1	KEGG: enc:ECL_04309 hypothetical protein
YP_004502199.1	KEGG: spe:Spro_3589 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region
YP_004502200.1	KEGG: spe:Spro_3590 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004502201.1	PFAM: Crotonase, core; KEGG: spe:Spro_3591 enoyl-CoA hydratase/isomerase
YP_004502202.1	PFAM: Helix-turn-helix, HxlR type; KEGG: spe:Spro_3592 HxlR family transcriptional regulator
YP_004502203.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ebi:EbC_28380 GCN5-related N-acetyltransferase
YP_004502204.1	KEGG: rah:Rahaq_2329 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004502205.1	PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: sjp:SJA_C1-34830 LmbE-like protein
YP_004502206.1	KEGG: bpy:Bphyt_0911 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase
YP_004502208.1	KEGG: ecp:ECP_3006 protein of unknown function (DUF342); region: DUF342; pfam03961
YP_004502209.1	KEGG: ecp:ECP_3007 protein of unknown function (DUF2971); region: DUF2971; pfam11185
YP_004502210.1	PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase [glutamine-hydrolyzing]; KEGG: spe:Spro_3595 GMP synthase
YP_004502211.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: spe:Spro_3596 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_004502212.1	TIGRFAM: Exonuclease VII, large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; KEGG: spe:Spro_3597 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004502213.1	KEGG: spe:Spro_3598 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31
YP_004502214.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3599 major facilitator transporter
YP_004502215.1	KEGG: spe:Spro_3600 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004502216.1	KEGG: spe:Spro_3601 peptidase M4 thermolysin; PFAM: Peptidase M4, thermolysin C-terminal; Peptidase M4, thermolysin
YP_004502217.1	KEGG: spe:Spro_3602 hypothetical protein
YP_004502218.1	PFAM: Protein of unknown function DUF1407; KEGG: spe:Spro_3603 hypothetical protein
YP_004502219.1	PFAM: Auxin efflux carrier; KEGG: spe:Spro_3604 auxin efflux carrier
YP_004502220.1	TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; HAMAP: GTP-binding, EngA; KEGG: spe:Spro_3605 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related
YP_004502221.1	TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat; KEGG: spe:Spro_3606 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat
YP_004502222.1	PFAM: Protein of unknown function DUF2133; KEGG: spe:Spro_3607 hypothetical protein
YP_004502223.1	PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: spe:Spro_3608 histidyl-tRNA synthetase
YP_004502224.1	TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: spe:Spro_3609 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004502225.1	HAMAP: Cytoskeleton protein rodZ; PFAM: Helix-turn-helix type 3; KEGG: spe:Spro_3610 cytoskeletal protein RodZ; SMART: Helix-turn-helix type 3
YP_004502226.1	TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; KEGG: spe:Spro_3611 type IV pilus biogenesis/stability protein PilW; SMART: Tetratricopeptide repeat
YP_004502227.1	TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; KEGG: spe:Spro_3612 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM
YP_004502228.1	SMART: Nucleoside diphosphate kinase, core; HAMAP: Nucleoside diphosphate kinase; KEGG: spe:Spro_3613 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core
YP_004502229.1	TIGRFAM: Penicillin-binding protein 1C; KEGG: spe:Spro_3614 penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal
YP_004502230.1	PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; KEGG: spe:Spro_3615 alpha-2-macroglobulin domain-containing protein
YP_004502231.1	TIGRFAM: Phosphotransferase system, glucose-like IIB component; KEGG: pct:PC1_3019 PTS system, glucose-like IIB subunint; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004502232.1	KEGG: eca:ECA3226 6-phospho-alpha-glucosidase; PFAM: Glycoside hydrolase, family 4
YP_004502233.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: eca:ECA3228 transcriptional regulator
YP_004502234.1	PFAM: SseB; KEGG: spe:Spro_3619 enhanced serine sensitivity protein SseB
YP_004502235.1	HAMAP: Peptidase B; KEGG: spe:Spro_3620 aminopeptidase B; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal
YP_004502236.1	KEGG: spe:Spro_3621 hypothetical protein; TIGRFAM: ISC system FeS cluster assembly, IscX; PFAM: ISC system FeS cluster assembly, IscX
YP_004502237.1	KEGG: spe:Spro_3622 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: Ferredoxin
YP_004502238.1	TIGRFAM: ISC system FeS cluster assembly, HscA chaperone; HAMAP: ISC system FeS cluster assembly, HscA chaperone; KEGG: spe:Spro_3623 chaperone protein HscA; PFAM: Heat shock protein 70
YP_004502239.1	SMART: Heat shock protein DnaJ, N-terminal; TIGRFAM: Co-chaperone Hsc20; KEGG: spe:Spro_3624 co-chaperone HscB; HAMAP: Co-chaperone protein hscB; PFAM: Heat shock cognate protein B, C-terminal oligomerisation; Heat shock protein DnaJ, N-terminal
YP_004502240.1	TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion; HAMAP: Iron-binding protein iscA; KEGG: spe:Spro_3625 iron-sulfur cluster assembly protein; PFAM: FeS cluster biogenesis
YP_004502241.1	KEGG: spe:Spro_3626 scaffold protein; TIGRFAM: ISC system FeS cluster assembly, IscU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal
YP_004502242.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; TIGRFAM: Cysteine desulfurase; HAMAP: Cysteine desulfurase; KEGG: spe:Spro_3627 cysteine desulfurase
YP_004502243.1	TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcriptional regulator, Rrf2; HAMAP: HTH-type transcriptional regulator iscR; KEGG: spe:Spro_3628 DNA-binding transcriptional regulator IscR; PFAM: Transcriptional regulator, Rrf2
YP_004502244.1	KEGG: spe:Spro_3629 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004502245.1	PFAM: Inositol monophosphatase; KEGG: spe:Spro_3630 inositol monophosphatase
YP_004502246.1	PFAM: Nickel/cobalt transporter, high-affinity; KEGG: spe:Spro_3631 high-affinity nickel-transporter
YP_004502247.1	PFAM: Protein of unknown function DUF1007; KEGG: spe:Spro_3632 hypothetical protein
YP_004502248.1	PFAM: PRD; KEGG: spe:Spro_3633 stationary phase inducible protein CsiE
YP_004502249.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3634 putative 3-phenylpropionic acid transporter
YP_004502250.1	KEGG: spe:Spro_3638 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004502251.1	HAMAP: Flavohemoprotein; KEGG: spe:Spro_3639 nitric oxide dioxygenase; PFAM: Globin, subset; Oxidoreductase FAD-binding region; Oxidoreductase FAD/NAD(P)-binding
YP_004502252.1	PFAM: Nitrogen regulatory protein PII; KEGG: spe:Spro_3649 nitrogen regulatory protein P-II 1
YP_004502253.1	KEGG: spe:Spro_3650 NAD synthetase; TIGRFAM: NAD+ synthase; PFAM: NAD+ synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004502254.1	KEGG: spe:Spro_3651 two component sigma54 specific fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004502255.1	KEGG: spe:Spro_3652 hypothetical protein
YP_004502256.1	KEGG: spe:Spro_3653 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004502257.1	PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase, eukaryote/proteobacteria; HAMAP: Phosphoribosylformylglycinamidine synthase; KEGG: spe:Spro_3654 phosphoribosylformylglycinamidine synthase
YP_004502258.1	HAMAP: Membrane-bound lytic murein transglycosylase F; PFAM: Lytic transglycosylase-like, catalytic; Extracellular solute-binding protein, family 3; KEGG: spe:Spro_3655 putative transglycosylase; SMART: Extracellular solute-binding protein, family 3
YP_004502259.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: spe:Spro_3656 CMP/dCMP deaminase zinc-binding
YP_004502260.1	KEGG: spe:Spro_3657 putative integral membrane protein
YP_004502261.1	manually curated; KEGG: spe:Spro_3660 phosphotransferase system EIIC; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004502262.1	TIGRFAM: Glucokinase regulatory-like protein; HAMAP: N-acetylmuramic acid 6-phosphate etherase; KEGG: spe:Spro_3661 N-acetylmuramic acid-6-phosphate etherase; PFAM: Sugar isomerase (SIS)
YP_004502264.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: spe:Spro_3662 putative DNA-binding transcriptional regulator
YP_004502265.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: spe:Spro_3664 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004502266.1	TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; HAMAP: Holo-[acyl-carrier-protein] synthase; KEGG: spe:Spro_3665 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase
YP_004502267.1	PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: spe:Spro_3666 pyridoxine 5'-phosphate synthase
YP_004502268.1	TIGRFAM: Recombination protein O, RecO; HAMAP: DNA repair protein recO; KEGG: spe:Spro_3667 DNA repair protein RecO; PFAM: Recombination protein O, RecO
YP_004502269.1	TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; HAMAP: GTP-binding protein Era; KEGG: spe:Spro_3668 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_004502270.1	KEGG: rah:Rahaq_3434 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA binding
YP_004502271.1	KEGG: spe:Spro_3670 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_004502272.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; HAMAP: GTP-binding protein lepA; KEGG: spe:Spro_3671 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_004502273.1	KEGG: spe:Spro_3672 hypothetical protein
YP_004502274.1	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: spe:Spro_3673 SoxR reducing system protein RseC
YP_004502275.1	PFAM: MucB/RseB; KEGG: spe:Spro_3674 periplasmic negative regulator of sigmaE
YP_004502276.1	PFAM: Anti sigma-E protein RseA, N-terminal; Anti sigma-E protein RseA, C-terminal; KEGG: spe:Spro_3675 anti-RNA polymerase sigma factor SigE
YP_004502277.1	KEGG: spe:Spro_3676 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004502278.1	TIGRFAM: L-aspartate oxidase; KEGG: spe:Spro_3677 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004502279.1	KEGG: spe:Spro_3678 methyltransferase small; HAMAP: tRNA (adenine-N(6)-)-methyltransferase; PFAM: Methyltransferase small
YP_004502280.1	KEGG: spe:Spro_3679 ATP-dependent RNA helicase SrmB; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004502281.1	SMART: Ankyrin repeat; KEGG: spe:Spro_3680 ankyrin
YP_004502282.1	KEGG: spe:Spro_3681 phospholipase A(1)
YP_004502283.1	KEGG: spe:Spro_3682 autonomous glycyl radical cofactor GrcA; HAMAP: Glycyl radical cofactor protein YfiD; PFAM: Formate C-acetyltransferase glycine radical
YP_004502284.1	TIGRFAM: Uracil-DNA glycosylase; HAMAP: Uracil-DNA glycosylase; KEGG: spe:Spro_3683 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like
YP_004502285.1	KEGG: spe:Spro_3684 heat shock protein GrpE; HAMAP: GrpE nucleotide exchange factor; PFAM: GrpE nucleotide exchange factor
YP_004502286.1	KEGG: spe:Spro_3685 inorganic polyphosphate/ATP-NAD kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD/AcoX kinase
YP_004502287.1	KEGG: spe:Spro_3686 recombination and repair protein; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal
YP_004502288.1	PFAM: SmpA/OmlA; KEGG: spe:Spro_3687 hypothetical protein
YP_004502289.1	KEGG: spe:Spro_3688 hypothetical protein; HAMAP: Protein rnfH; PFAM: Uncharacterised protein family UPF0125
YP_004502290.1	PFAM: Streptomyces cyclase/dehydrase; KEGG: spe:Spro_3689 hypothetical protein
YP_004502291.1	TIGRFAM: SsrA-binding protein; HAMAP: SsrA-binding protein; KEGG: spe:Spro_3690 SsrA-binding protein; PFAM: SsrA-binding protein
YP_004502292.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: kpn:KPN_03308 LysR family transcriptional regulator
YP_004502293.1	KEGG: eum:ECUMN_1773 hypothetical protein
YP_004502294.1	PFAM: ThiJ/PfpI; KEGG: eum:ECUMN_1772 hypothetical protein
YP_004502295.1	PFAM: Aldo/keto reductase; KEGG: eum:ECUMN_1771 putative Tas protein
YP_004502296.1	KEGG: rop:ROP_53380 decarboxylase; PFAM: Amidohydrolase 2
YP_004502297.1	PFAM: Flavodoxin-like fold; KEGG: kpn:KPN_03310 putative NAD(P)H oxidoreductase
YP_004502298.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eum:ECUMN_1764 putative lipoprotein
YP_004502299.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: eum:ECUMN_1763 putative carboxymuconolactone decarboxylase precursor
YP_004502300.1	KEGG: pst:PSPTO_1584 alcohol dehydrogenase, zinc-containing protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004502301.1	KEGG: pst:PSPTO_1583 hypothetical protein
YP_004502302.1	KEGG: esa:ESA_pESA3p05526 hypothetical protein
YP_004502304.1	KEGG: enc:ECL_01110 hypothetical protein
YP_004502305.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3703 GCN5-related N-acetyltransferase
YP_004502306.1	PFAM: Methyltransferase type 11; KEGG: spe:Spro_3704 type 11 methyltransferase
YP_004502307.1	KEGG: pao:Pat9b_2912 hypothetical protein
YP_004502308.1	KEGG: spe:Spro_3705 hypothetical protein
YP_004502309.1	PFAM: DoxX; Surfeit locus 4; KEGG: spe:Spro_3706 DoxX family protein
YP_004502310.1	KEGG: spe:Spro_3708 hypothetical protein
YP_004502311.1	PFAM: Protein of unknown function DUF1198; KEGG: spe:Spro_3709 hypothetical protein
YP_004502312.1	PFAM: Protein of unknown function DUF2002; KEGG: spe:Spro_3710 hypothetical protein
YP_004502313.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3711 major facilitator transporter
YP_004502314.1	KEGG: spe:Spro_3712 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004502315.1	KEGG: spe:Spro_3713 hypothetical protein
YP_004502316.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3714 LysR family transcriptional regulator
YP_004502317.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3715 major facilitator transporter
YP_004502318.1	KEGG: spe:Spro_3716 putative cytoplasmic protein
YP_004502320.1	KEGG: pam:PANA_2003 hypothetical protein
YP_004502321.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: spe:Spro_3718 hypothetical protein
YP_004502322.1	KEGG: spe:Spro_3719 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004502323.1	KEGG: spe:Spro_3720 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004502324.1	KEGG: spe:Spro_3721 glutaredoxin-like protein NrdH; TIGRFAM: Glutaredoxin-like protein NrdH; PFAM: Glutaredoxin
YP_004502325.1	TIGRFAM: Ribonucleotide reductase Class Ib, NrdI; HAMAP: Ribonucleotide reductase Class Ib, NrdI, bacterial; KEGG: spe:Spro_3722 ribonucleotide reductase stimulatory protein; PFAM: Ribonucleotide reductase Class Ib, NrdI
YP_004502326.1	KEGG: spe:Spro_3723 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase N-terminal; Ribonucleotide reductase large subunit, N-terminal
YP_004502327.1	KEGG: spe:Spro_3724 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_004502328.1	PFAM: Plasmid stabilisation system; KEGG: azo:azo3077 hypothetical protein
YP_004502329.1	PFAM: CopG-like DNA-binding; KEGG: azo:azo3076 hypothetical protein
YP_004502330.1	PFAM: Protein of unknown function DUF1289; KEGG: spe:Spro_3726 hypothetical protein
YP_004502331.1	KEGG: spe:Spro_3727 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502332.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3728 LysR family transcriptional regulator
YP_004502333.1	KEGG: spe:Spro_3729 beta-lactamase domain-containing protein
YP_004502334.1	PFAM: Patatin; KEGG: ppr:PBPRB1472 hypothetical protein
YP_004502335.1	PFAM: 2-hydroxycarboxylate transporter; KEGG: spe:Spro_3730 citrate carrier protein
YP_004502336.1	KEGG: spe:Spro_3731 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region, ATPase-like; PAS fold; SMART: ATP-binding region, ATPase-like; PAS
YP_004502337.1	KEGG: spe:Spro_3732 response regulator receiver/unknown domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region
YP_004502338.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: spe:Spro_3733 glycine betaine/L-proline ABC transporter ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core
YP_004502339.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3734 glycine betaine transporter membrane protein
YP_004502340.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: spe:Spro_3735 glycine betaine transporter periplasmic subunit
YP_004502341.1	PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: spe:Spro_3736 glycine betaine transporter periplasmic subunit
YP_004502342.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3737 LysR family transcriptional regulator
YP_004502343.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3738 major facilitator transporter
YP_004502344.1	KEGG: spe:Spro_3741 transcriptional repressor MprA; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004502345.1	KEGG: spe:Spro_3742 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004502346.1	KEGG: spe:Spro_3743 efflux pump membrane protein; TIGRFAM: Efflux pump membrane protein Emr; PFAM: Secretion protein HlyD
YP_004502347.1	KEGG: spe:Spro_3744 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004502348.1	PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: spe:Spro_3745 putative methyltransferase
YP_004502349.1	TIGRFAM: Thioredoxin; KEGG: spe:Spro_3746 thioredoxin 2; PFAM: Thioredoxin domain
YP_004502350.1	PFAM: DTW; KEGG: spe:Spro_3747 DTW domain-containing protein
YP_004502351.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding; KEGG: spe:Spro_3748 GCN5-related N-acetyltransferase
YP_004502352.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: spe:Spro_3749 phosphatidylserine synthase; SMART: Phospholipase D/Transphosphatidylase
YP_004502353.1	KEGG: spe:Spro_3750 hypothetical protein
YP_004502354.1	KEGG: spe:Spro_3751 alpha-ketoglutarate transporter; TIGRFAM: Citrate-proton symport; PFAM: General substrate transporter
YP_004502355.1	KEGG: spe:Spro_3752 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM: Haloacid dehalogenase-like hydrolase
YP_004502356.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, methionine import, ATP-binding protein, MetN; KEGG: spe:Spro_3753 DL-methionine transporter ATP-binding subunit; PFAM: ABC transporter-like; NIL domain
YP_004502357.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3754 DL-methionine transporter permease subunit
YP_004502358.1	KEGG: spe:Spro_3755 DL-methionine transporter substrate-binding subunit; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004502359.1	KEGG: spe:Spro_3756 outer membrane lipoprotein
YP_004502360.1	KEGG: spe:Spro_3757 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0066; PFAM: Uncharacterised protein family UPF0066
YP_004502361.1	TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; HAMAP: Prolyl-tRNA synthetase; KEGG: spe:Spro_3758 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding
YP_004502362.1	PFAM: Copper resistance lipoprotein NlpE; KEGG: spe:Spro_3759 hypothetical protein
YP_004502363.1	PFAM: Class I peptide chain release factor; KEGG: spe:Spro_3760 peptidyl-tRNA hydrolase domain-containing protein
YP_004502364.1	PFAM: YaeQ; KEGG: spe:Spro_3761 YaeQ family protein
YP_004502365.1	KEGG: spe:Spro_3762 hypothetical protein; HAMAP: Uncharacterised protein family UPF0253; PFAM: Uncharacterised protein family UPF0253
YP_004502366.1	PFAM: Modulator of Rho-dependent transcription termination; KEGG: spe:Spro_3763 transcriptional antiterminator, Rof
YP_004502367.1	PFAM: Cytochrome c, class I; KEGG: spe:Spro_3764 cytochrome c class I
YP_004502368.1	TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; HAMAP: tRNA(Ile)-lysidine synthase; KEGG: spe:Spro_3765 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop; Lysidine-tRNA(Ile) synthetase, substrate-binding domain
YP_004502370.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3770 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004502371.1	KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal
YP_004502372.1	PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: spe:Spro_3774 acetyl-CoA carboxylase carboxyltransferase subunit alpha
YP_004502373.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: spe:Spro_3775 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004502374.1	KEGG: spe:Spro_3776 ribonuclease HII; PFAM: Ribonuclease HII/HIII
YP_004502375.1	PFAM: Glycosyl transferase, family 19; TIGRFAM: Glycosyl transferase, family 19; HAMAP: Lipid-A-disaccharide synthase; KEGG: spe:Spro_3777 lipid-A-disaccharide synthase
YP_004502376.1	PFAM: Bacterial transferase hexapeptide repeat; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; HAMAP: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: spe:Spro_3778 UDP-N-acetylglucosamine acyltransferase
YP_004502377.1	TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; KEGG: spe:Spro_3779 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004502378.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: spe:Spro_3780 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat
YP_004502379.1	PFAM: Outer membrane chaperone Skp (OmpH); KEGG: spe:Spro_3781 periplasmic chaperone
YP_004502380.1	TIGRFAM: Outer membrane assembly protein, YaeT; HAMAP: Outer membrane protein assembly factor yaeT; KEGG: spe:Spro_3782 outer membrane protein assembly factor YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004502381.1	TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: spe:Spro_3783 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF
YP_004502382.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: spe:Spro_3784 CDP-diglyceride synthase
YP_004502383.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Undecaprenyl pyrophosphate synthase; KEGG: spe:Spro_3785 undecaprenyl diphosphate synthase
YP_004502384.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: spe:Spro_3786 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004502385.1	TIGRFAM: Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; KEGG: spe:Spro_3787 ribosome recycling factor; PFAM: Ribosome recycling factor
YP_004502386.1	KEGG: spe:Spro_3788 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_004502387.1	TIGRFAM: Translation elongation factor EFTs/EF1B; HAMAP: Elongation factor Ts; KEGG: spe:Spro_3789 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_004502388.1	KEGG: spe:Spro_3790 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_004502389.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: spe:Spro_3791 methionine aminopeptidase; PFAM: Peptidase M24, structural domain
YP_004502390.1	KEGG: spe:Spro_3792 PII uridylyl-transferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; TIGRFAM: Protein-PII uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; SMART: Metal-dependent phosphohydrolase, HD region
YP_004502391.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; HAMAP: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; KEGG: spe:Spro_3793 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
YP_004502392.1	HAMAP: UPF0325 protein yaeH; KEGG: spe:Spro_3794 hypothetical protein
YP_004502393.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: spe:Spro_3795 flavodoxin
YP_004502394.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spe:Spro_3796 tRNA pseudouridine synthase C
YP_004502395.1	PFAM: Protein of unknown function DUF446; KEGG: spe:Spro_3797 hypothetical protein
YP_004502396.1	KEGG: spe:Spro_3798 major facilitator transporter; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004502397.1	KEGG: spe:Spro_3799 SecY interacting protein Syd; HAMAP: Protein syd; PFAM: Syd
YP_004502398.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; HAMAP: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: spe:Spro_3800 7-cyano-7-deazaguanine reductase
YP_004502399.1	PFAM: Conserved hypothetical protein CHP00730; KEGG: spe:Spro_3801 hypothetical protein
YP_004502400.1	HAMAP: Uncharacterized exonuclease xni; PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: spe:Spro_3802 exonuclease IX; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2
YP_004502401.1	HAMAP: YdgE, putative RNA 2'-O-ribose methyltranserase; KEGG: spe:Spro_3803 putative RNA 2'-O-ribose methyltransferase
YP_004502402.1	PFAM: Protein of unknown function DUF423; KEGG: spe:Spro_3804 hypothetical protein
YP_004502403.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3805 DNA-binding transcriptional activator GcvA
YP_004502404.1	PFAM: Protein of unknown function DUF903, bacterial; KEGG: spe:Spro_3806 hypothetical protein
YP_004502405.1	TIGRFAM: cysteine desulfurase, catalytic subunit CsdA; KEGG: spe:Spro_3807 cysteine sulfinate desulfinase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004502406.1	KEGG: spe:Spro_3808 Fe-S metabolism associated SufE; TIGRFAM: Cysteine desulfurase, sulphur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE
YP_004502407.1	PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: spe:Spro_3809 UBA/ThiF-type NAD/FAD binding protein
YP_004502408.1	PFAM: MltA; 3D; KEGG: spe:Spro_3810 murein transglycosylase A
YP_004502409.1	KEGG: spe:Spro_3811 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic
YP_004502410.1	PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); HAMAP: Amino-acid acetyltransferase; KEGG: spe:Spro_3812 N-acetylglutamate synthase
YP_004502411.1	TIGRFAM: Exodeoxyribonuclease V, alpha subunit; KEGG: spe:Spro_3813 exonuclease V subunit alpha; PFAM: RNA helicase 1, viral
YP_004502412.1	TIGRFAM: Exodeoxyribonuclease V, beta subunit; KEGG: spe:Spro_3814 exonuclease V subunit beta; PFAM: DNA helicase, UvrD/REP type
YP_004502413.1	KEGG: spe:Spro_3815 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_004502414.1	TIGRFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: spe:Spro_3816 exonuclease V subunit gamma; PFAM: Exodeoxyribonuclease V, RecC subunit
YP_004502415.1	KEGG: spe:Spro_3817 putative prepilin peptidase dependent protein c precursor
YP_004502416.1	PFAM: Protein of unknown function DUF2509; KEGG: spe:Spro_3818 hypothetical protein
YP_004502417.1	KEGG: spe:Spro_3819 putative prepilin peptidase dependent protein
YP_004502418.1	KEGG: spe:Spro_3820 hypothetical protein
YP_004502419.1	PFAM: Thymidylate synthase, C-terminal; TIGRFAM: Thymidylate synthase, C-terminal; HAMAP: Thymidylate synthase; KEGG: spe:Spro_3821 thymidylate synthase
YP_004502420.1	TIGRFAM: Prolipoprotein diacylglyceryl transferase; HAMAP: Prolipoprotein diacylglyceryl transferase; KEGG: spe:Spro_3822 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_004502421.1	SMART: GAF; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: spe:Spro_3823 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; GAF; PEP-utilising enzyme, mobile region
YP_004502422.1	KEGG: spe:Spro_3824 dinucleoside polyphosphate hydrolase; HAMAP: RNA pyrophosphohydrolase; PFAM: NUDIX hydrolase domain
YP_004502423.1	TIGRFAM: DNA mismatch repair protein MutH; HAMAP: DNA mismatch repair protein MutH; KEGG: spe:Spro_3825 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutH, conserved region
YP_004502424.1	PFAM: Integral membrane protein TerC; KEGG: spe:Spro_3826 integral membrane protein TerC
YP_004502425.1	PFAM: Protein of unknown function DUF903, bacterial; KEGG: spe:Spro_3827 hypothetical protein
YP_004502426.1	PFAM: Aldo/keto reductase; KEGG: spe:Spro_3828 putative aldo-keto reductase
YP_004502427.1	KEGG: spe:Spro_3829 lysophospholipid transporter LplT; HAMAP: Lysophospholipid transporter lplT; PFAM: Major facilitator superfamily MFS-1
YP_004502428.1	SMART: Phospholipid/glycerol acyltransferase; HAMAP: Bifunctional protein aas; KEGG: spe:Spro_3830 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase
YP_004502429.1	KEGG: spe:Spro_3831 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region
YP_004502430.1	KEGG: spe:Spro_3832 DNA-binding transcriptional regulator GalR; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004502431.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_3833 GCN5-related N-acetyltransferase
YP_004502432.1	KEGG: spe:Spro_3834 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004502433.1	KEGG: spe:Spro_3835 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004502434.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: spe:Spro_3836 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004502435.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3837 DNA-binding transcriptional regulator LysR
YP_004502436.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3838 major facilitator transporter
YP_004502437.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3839 LysR family transcriptional regulator
YP_004502438.1	KEGG: spe:Spro_3840 beta-lactamase domain-containing protein
YP_004502439.1	KEGG: spe:Spro_3841 hypothetical protein
YP_004502440.1	KEGG: spe:Spro_3842 hypothetical protein
YP_004502441.1	PFAM: ABC transporter, N-terminal; ABC transporter-like; KEGG: spe:Spro_3843 ABC transporter; SMART: ATPase, AAA+ type, core
YP_004502442.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3850 major facilitator transporter
YP_004502443.1	KEGG: spe:Spro_3851 hypothetical protein
YP_004502444.1	TIGRFAM: Cyclic peptide transporter; PFAM: ABC transporter-like; KEGG: spe:Spro_3852 multidrug transporter membrane component/ATP-binding component; SMART: ATPase, AAA+ type, core
YP_004502445.1	PFAM: Integrase, catalytic core, phage; KEGG: xbo:XBJ1_3623 tyrosine recombinase, regulator of FimA
YP_004502446.1	KEGG: sbp:Sbal223_0289 LuxR family two component transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004502447.1	KEGG: aha:AHA_1023 LuxR family DNA-binding response regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004502448.1	PFAM: Fimbrial protein, C-terminal; KEGG: esa:ESA_01971 hypothetical protein
YP_004502449.1	PFAM: Fimbrial protein, C-terminal; KEGG: see:SNSL254_A3915 long polar fimbrial protein
YP_004502450.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: spe:Spro_2874 fimbrial biogenesis outer membrane usher protein
YP_004502451.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: spe:Spro_2873 pili assembly chaperone
YP_004502452.1	PFAM: Fimbrial protein, C-terminal; KEGG: kpu:KP1_0597 fimbrial protein
YP_004502453.1	PFAM: Integrase, catalytic core, phage; KEGG: plu:plu1991 hypothetical protein
YP_004502454.1	PFAM: Phosphopantetheine-binding; KEGG: yen:YE0797 hypothetical protein
YP_004502455.1	KEGG: yen:YE0795 putative acyl-carrier-protein; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004502456.1	KEGG: yen:YE0794 putative outer-membrane efflux lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004502457.1	PFAM: ABC transporter-like; Protein of unknown function DUF214, permase predicted; KEGG: yen:YE0793 ABC transporter, ATP-binding component; SMART: ATPase, AAA+ type, core
YP_004502458.1	KEGG: yen:YE0792 putative type I secretion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004502459.1	PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; KEGG: yen:YE0791 ABC transporter, ATP-binding component; SMART: ATPase, AAA+ type, core
YP_004502460.1	KEGG: yen:YE0790 hypothetical protein
YP_004502461.1	PFAM: DSBA oxidoreductase; KEGG: yen:YE0789 putative thiol:disulfide interchange protein
YP_004502462.1	KEGG: yen:YE0788 hypothetical protein
YP_004502463.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3853 LysR family transcriptional regulator
YP_004502464.1	HAMAP: L-lactate dehydrogenase [cytochrome]; KEGG: spe:Spro_3855 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004502465.1	KEGG: smt:Smal_1835 choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; PFAM: BCCT transporter
YP_004502466.1	TIGRFAM: Transcriptional repressor BetI; HAMAP: HTH-type transcriptional regulator betI; KEGG: sml:Smlt2239 putative TetR family regulatory protein; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_004502467.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_3856 LysR family transcriptional regulator
YP_004502468.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: spe:Spro_3857 4-oxalocrotonate tautomerase
YP_004502469.1	PFAM: ABC transporter-like; ABC transporter, transmembrane region; KEGG: spe:Spro_3858 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502470.1	KEGG: yen:YE1370A putative dehydrogenase subunit
YP_004502471.1	KEGG: spe:Spro_1808 putative dehydrogenase subunit
YP_004502472.1	KEGG: spe:Spro_1807 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004502473.1	KEGG: yen:YE2451 putative lipoprotein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004502474.1	KEGG: ypb:YPTS_3653 acid-resistance membrane protein
YP_004502475.1	HAMAP: Curved DNA-binding protein; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; KEGG: spe:Spro_3860 curved DNA-binding protein CbpA; SMART: Heat shock protein DnaJ, N-terminal
YP_004502476.1	KEGG: spe:Spro_3861 chaperone-modulator protein CbpM
YP_004502477.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: agr:AGROH133_14311 transcriptional regulator, LysR family
YP_004502478.1	PFAM: Carboxymuconolactone decarboxylase; Alpha/beta hydrolase fold-1; KEGG: aba:Acid345_3042 alpha/beta hydrolase
YP_004502479.1	KEGG: spe:Spro_3862 cold-shock DNA-binding domain-containing protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004502482.1	KEGG: tau:Tola_1062 hypothetical protein
YP_004502483.1	KEGG: spe:Spro_3874 hypothetical protein
YP_004502485.1	KEGG: yps:YPTB1792 hypothetical protein
YP_004502486.1	KEGG: kpn:KPN_01377 putative excisionase; manually curated; PFAM: Protein of unknown function DUF1233, excisionase putative
YP_004502487.1	KEGG: ecz:ECS88_1153 excisionase
YP_004502488.1	KEGG: yen:YE1800 excisionase; manually curated; PFAM: Excisionase-like
YP_004502489.1	KEGG: eta:ETA_24200 hypothetical protein
YP_004502490.1	KEGG: sei:SPC_1307 gene 13 protein
YP_004502491.1	PFAM: Prophage CP4-57 regulatory
YP_004502492.1	KEGG: ecq:ECED1_1135 hypothetical protein
YP_004502493.1	KEGG: tcx:Tcr_1420 hypothetical protein
YP_004502494.1	KEGG: sbm:Shew185_4132 hypothetical protein
YP_004502495.1	PFAM: Protein of unknown function DUF927; KEGG: eca:ECA2754 putative prophage primase
YP_004502496.1	KEGG: kpe:KPK_A0075 hypothetical protein
YP_004502498.1	KEGG: ecg:E2348C_3903 hypothetical protein
YP_004502499.1	PFAM: AntA/AntB antirepressor; KEGG: spe:Spro_3884 AntA/AntB antirepressor domain-containing protein
YP_004502500.1	PFAM: Prophage CP4-57 regulatory; KEGG: spe:Spro_3885 phage transcriptional regulator AlpA
YP_004502501.1	KEGG: eck:EC55989_0269 hypothetical protein
YP_004502503.1	PFAM: Integrase, catalytic core, phage; KEGG: spe:Spro_3887 integrase family protein
YP_004502504.1	PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase; KEGG: spe:Spro_3888 lysyl-tRNA synthetase
YP_004502505.1	manually curated
YP_004502506.1	KEGG: spe:Spro_3890 ssDNA exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_004502507.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: spe:Spro_3891 thiol:disulfide interchange protein DsbC
YP_004502508.1	TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: spe:Spro_3892 site-specific tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004502509.1	KEGG: spe:Spro_3893 flavodoxin FldB; TIGRFAM: Flavodoxin, long chain; PFAM: Flavodoxin/nitric oxide synthase
YP_004502510.1	PFAM: Uncharacterised protein family, inner membrane CreD; KEGG: spe:Spro_3894 hypothetical protein
YP_004502511.1	KEGG: spe:Spro_3895 sensory histidine kinase CreC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004502512.1	KEGG: spe:Spro_3896 DNA-binding response regulator CreB; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004502513.1	PFAM: Protein of unknown function DUF1434; KEGG: spe:Spro_3897 hypothetical protein
YP_004502514.1	PFAM: Protein of unknown function DUF339; KEGG: spe:Spro_3898 hypothetical protein
YP_004502515.1	TIGRFAM: Folate-binding, YgfZ; HAMAP: tRNA-modifying protein ygfZ; KEGG: spe:Spro_3899 putative global regulator; PFAM: Glycine cleavage T-protein, N-terminal
YP_004502516.1	KEGG: spe:Spro_3900 hemolysin III family channel protein; TIGRFAM: HylII; PFAM: Hly-III related
YP_004502517.1	PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: spe:Spro_3901 metal dependent phosphohydrolase
YP_004502518.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3902 major facilitator transporter
YP_004502519.1	KEGG: spe:Spro_3903 hypothetical protein
YP_004502520.1	PFAM: Amidase; KEGG: spe:Spro_3904 amidase
YP_004502521.1	KEGG: spe:Spro_3905 hypothetical protein
YP_004502522.1	KEGG: spe:Spro_3906 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004502523.1	KEGG: spe:Spro_3909 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502524.1	PFAM: MltA-interacting MipA; KEGG: pfl:PFL_0321 hypothetical protein
YP_004502526.1	KEGG: spe:Spro_3910 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004502527.1	KEGG: spe:Spro_3911 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004502528.1	PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; KEGG: spe:Spro_3912 alcohol dehydrogenase
YP_004502529.1	TIGRFAM: Glycine cleavage system P-protein; HAMAP: Glycine cleavage system P-protein; KEGG: spe:Spro_3914 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal
YP_004502530.1	TIGRFAM: Glycine cleavage H-protein, subgroup; HAMAP: Glycine cleavage H-protein; KEGG: spe:Spro_3915 glycine cleavage system H protein; PFAM: Glycine cleavage H-protein
YP_004502531.1	PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; TIGRFAM: Glycine cleavage system T protein; HAMAP: Aminomethyltransferase; KEGG: spe:Spro_3916 glycine cleavage system aminomethyltransferase T
YP_004502532.1	KEGG: spe:Spro_3917 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: FAD dependent oxidoreductase
YP_004502533.1	KEGG: spe:Spro_3918 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004502534.1	PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: spe:Spro_3919 proline aminopeptidase P II
YP_004502535.1	KEGG: spe:Spro_3920 hypothetical protein; TIGRFAM: YgfB/YecA protein; HAMAP: UPF0149 protein ygfB
YP_004502536.1	manually curated; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spe:Spro_3922 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004502537.1	KEGG: spe:Spro_3923 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT
YP_004502538.1	PFAM: Ribose 5-phosphate isomerase; TIGRFAM: Ribose 5-phosphate isomerase; HAMAP: Ribose-5-phosphate isomerase, subgroup; KEGG: spe:Spro_3924 ribose-5-phosphate isomerase A
YP_004502539.1	TIGRFAM: Transcriptional regulator, ArgP; HAMAP: Chromosome initiation inhibitor; KEGG: spe:Spro_3925 chromosome replication initiation inhibitor protein; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding
YP_004502540.1	PFAM: Protein of unknown function DUF541; KEGG: spe:Spro_3926 hypothetical protein
YP_004502541.1	TIGRFAM: L-lysine exporter; HAMAP: Arginine exporter protein ArgO; KEGG: spe:Spro_3927 arginine exporter protein; PFAM: Lysine exporter protein (LYSE/YGGA)
YP_004502542.1	KEGG: spe:Spro_3928 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004502543.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3929 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502544.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_3930 monosaccharide-transporting ATPase
YP_004502545.1	KEGG: spe:Spro_3931 hypothetical protein
YP_004502546.1	KEGG: spe:Spro_3932 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004502547.1	HAMAP: 2,3-diketo-L-gulonate reductase; KEGG: spe:Spro_3933 2,3-diketo-L-gulonate reductase; PFAM: Malate/L-lactate dehydrogenase
YP_004502548.1	KEGG: spe:Spro_3934 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022
YP_004502549.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3935 major facilitator transporter
YP_004502550.1	KEGG: spe:Spro_3936 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004502551.1	KEGG: spe:Spro_3937 3-keto-L-gulonate-6-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core
YP_004502552.1	TIGRFAM: Putative hexulose-6-phosphate isomerase; KEGG: spe:Spro_3938 putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase, TIM barrel domain
YP_004502553.1	TIGRFAM: L-ribulose-5-phosphate 4-epimerase; KEGG: spe:Spro_3939 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal
YP_004502554.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: spe:Spro_3940 pseudouridine synthase
YP_004502555.1	PFAM: Protein of unknown function DUF2058; KEGG: yen:YE2637 hypothetical protein
YP_004502556.1	PFAM: Mechanosensitive ion channel MscS; Conserved TM helix; KEGG: spe:Spro_3942 mechanosensitive ion channel MscS
YP_004502557.1	PFAM: Protein of unknown function DUF1345; KEGG: spe:Spro_3943 hypothetical protein
YP_004502558.1	TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; KEGG: spe:Spro_3944 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004502559.1	HAMAP: Phosphoglycerate kinase; KEGG: spe:Spro_3945 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004502560.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; TIGRFAM: D-erythrose-4-phosphate dehydrogenase; HAMAP: D-erythrose-4-phosphate dehydrogenase; KEGG: spe:Spro_3946 erythrose 4-phosphate dehydrogenase
YP_004502561.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3947 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502562.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_3948 binding-protein-dependent transport systems inner membrane component
YP_004502563.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_3949 extracellular solute-binding protein
YP_004502564.1	PFAM: Phosphoglycerate mutase; KEGG: hso:HS_1664 phosphoglycerate mutase
YP_004502565.1	KEGG: hso:HS_1663 permease; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004502566.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hso:HS_1662 LysR family transcriptional regulator
YP_004502567.1	TIGRFAM: Transketolase, bacterial-like; KEGG: spe:Spro_3480 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004502568.1	PFAM: Peptidase M48, Ste24p; KEGG: spe:Spro_3955 peptidase M48 Ste24p
YP_004502569.1	KEGG: spe:Spro_3956 hypothetical protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region
YP_004502570.1	KEGG: spe:Spro_3957 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004502571.1	HAMAP: Aspartate dehydrogenase, NAD biosynthesis, prokaryotic; KEGG: spe:Spro_3958 L-aspartate dehydrogenase; PFAM: Aspartate dehydrogenase; Aspartate/homoserine dehydrogenase, NAD-binding
YP_004502572.1	KEGG: spe:Spro_3959 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502573.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_3960 alpha/beta hydrolase fold domain-containing protein
YP_004502574.1	PFAM: Cupin 2, conserved barrel; KEGG: spe:Spro_3961 cupin 2 domain-containing protein
YP_004502575.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_3962 major facilitator transporter
YP_004502576.1	KEGG: spe:Spro_3963 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004502577.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_3964 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004502578.1	KEGG: spe:Spro_3965 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004502579.1	KEGG: spe:Spro_3966 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502580.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: spe:Spro_3967 Rieske (2Fe-2S) domain-containing protein
YP_004502581.1	KEGG: spe:Spro_3968 hypothetical protein
YP_004502582.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: spe:Spro_3969 Rieske (2Fe-2S) domain-containing protein
YP_004502583.1	TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: spe:Spro_3971 23S rRNA pseudouridine synthase F; SMART: RNA-binding S4
YP_004502584.1	PFAM: Ureohydrolase; TIGRFAM: Putative agmatinase; HAMAP: Agmatinase; KEGG: spe:Spro_3972 agmatinase
YP_004502587.1	KEGG: spe:Spro_3973 arginine decarboxylase; manually curated; TIGRFAM: Arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; HAMAP: Biosynthetic arginine decarboxylase
YP_004502588.1	PFAM: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; KEGG: spe:Spro_3974 S-adenosylmethionine synthetase
YP_004502589.1	PFAM: Hok/gef cell toxic protein; KEGG: spe:Spro_0948 Hok/gef cell toxic protein
YP_004502590.1	PFAM: Bacterial transport system permease protein; KEGG: spe:Spro_3976 iron-hydroxamate transporter permease subunit
YP_004502591.1	PFAM: Periplasmic binding protein; KEGG: spe:Spro_3977 iron-hydroxamate transporter substrate-binding subunit
YP_004502592.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3978 iron-hydroxamate transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004502593.1	KEGG: rah:Rahaq_3657 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel
YP_004502594.1	TIGRFAM: Penicillin-binding protein 1B; KEGG: spe:Spro_3981 penicillin-binding protein 1B; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004502595.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, C-terminal; Helicase-associated region; KEGG: spe:Spro_3982 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004502596.1	KEGG: spe:Spro_3983 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; PFAM: Phosphoesterase, HXTX
YP_004502597.1	TIGRFAM: Sugar fermentation stimulation protein; HAMAP: Sugar fermentation stimulation protein; KEGG: spe:Spro_3984 sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein
YP_004502598.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: rah:Rahaq_3662 TraR/DksA family transcriptional regulator
YP_004502599.1	TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; HAMAP: Glutamyl-Q tRNA(Asp) synthetase; KEGG: spe:Spro_3986 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004502600.1	TIGRFAM: Poly(A) polymerase, PcnB; KEGG: spe:Spro_3987 poly(A) polymerase I; PFAM: Polynucleotide adenylyltransferase region
YP_004502601.1	TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: spe:Spro_3988 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004502602.1	KEGG: spe:Spro_3989 sensor protein QseC; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region
YP_004502603.1	KEGG: spe:Spro_3990 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004502604.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; KEGG: spe:Spro_3991 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_004502605.1	TIGRFAM: Pantoate-beta-alanine ligase; HAMAP: Pantoate-beta-alanine ligase; KEGG: spe:Spro_3992 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase
YP_004502606.1	PFAM: Aspartate decarboxylase; TIGRFAM: Aspartate decarboxylase; HAMAP: Aspartate decarboxylase; KEGG: spe:Spro_3993 aspartate alpha-decarboxylase
YP_004502607.1	PFAM: Polysaccharide deacetylase; KEGG: spe:Spro_3994 polysaccharide deacetylase
YP_004502608.1	PFAM: ABC-2 type transporter; KEGG: spe:Spro_3995 ABC-2 type transporter
YP_004502609.1	PFAM: ABC transporter-like; KEGG: spe:Spro_3996 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502610.1	KEGG: spe:Spro_3997 carbonate dehydratase; PFAM: Carbonic anhydrase
YP_004502611.1	TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: spe:Spro_3998 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004502612.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: spe:Spro_3999 multicopper oxidase
YP_004502613.1	KEGG: spe:Spro_4000 hypothetical protein
YP_004502614.1	TIGRFAM: Spermine synthase; HAMAP: Spermidine synthase; KEGG: spe:Spro_4001 spermidine synthase; PFAM: Spermine synthase
YP_004502615.1	PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; TIGRFAM: S-adenosylmethionine decarboxylase, bacterial; HAMAP: S-adenosylmethionine decarboxylase proenzyme; KEGG: spe:Spro_4002 S-adenosylmethionine decarboxylase
YP_004502616.1	KEGG: spe:Spro_4007 hypothetical protein; HAMAP: UPF0231 protein yacL; PFAM: Uncharacterised conserved protein UCP006287
YP_004502617.1	TIGRFAM: Aconitase B, bacterial; KEGG: spe:Spro_4008 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004502618.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: spe:Spro_4009 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004502619.1	TIGRFAM: Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex; KEGG: spe:Spro_4010 dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004502620.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: spe:Spro_4011 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004502621.1	KEGG: spe:Spro_4012 transcriptional regulator PdhR; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR
YP_004502622.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_4013 amino acid permease-associated protein
YP_004502623.1	KEGG: spe:Spro_4014 sugar (glycoside-pentoside-hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; PFAM: Major facilitator superfamily MFS-1
YP_004502624.1	KEGG: spe:Spro_4015 alpha-N-arabinofuranosidase; PFAM: Glycoside hydrolase, family 43
YP_004502625.1	KEGG: spe:Spro_4016 gluconate 2-dehydrogenase; PFAM: Cytochrome c, class I
YP_004502626.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: spe:Spro_4017 2Fe-2S iron-sulfur cluster binding domain-containing protein
YP_004502627.1	PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; KEGG: spe:Spro_4018 aldehyde oxidase and xanthine dehydrogenas
YP_004502628.1	KEGG: spe:Spro_4019 hypothetical protein
YP_004502629.1	PFAM: XdhC- CoxI; KEGG: spe:Spro_4020 hypothetical protein
YP_004502630.1	KEGG: spe:Spro_4021 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004502631.1	TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: spe:Spro_4022 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region
YP_004502632.1	manually curated; HAMAP: Protein sprT; KEGG: spe:Spro_4023 hypothetical protein; SMART: Protein of unknown function SprT
YP_004502633.1	KEGG: spe:Spro_4024 deoxyribonuclease I; PFAM: Endonuclease I
YP_004502634.1	KEGG: spe:Spro_4025 hypothetical protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_004502635.1	PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: spe:Spro_4026 glutathione synthetase
YP_004502636.1	KEGG: spe:Spro_4027 hypothetical protein; HAMAP: Protein of unknown function DUF179; PFAM: Protein of unknown function DUF179
YP_004502637.1	SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: spe:Spro_4028 Holliday junction resolvase-like protein; HAMAP: Holliday junction resolvase; PFAM: Resolvase, holliday junction-type, YqgF-like
YP_004502638.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: spe:Spro_4029 twitching motility protein; SMART: ATPase, AAA+ type, core
YP_004502639.1	KEGG: spe:Spro_4030 alanine racemase domain-containing protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004502640.1	TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; KEGG: spe:Spro_4031 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_004502641.1	PFAM: Protein of unknown function YGGT; KEGG: spe:Spro_4032 hypothetical protein
YP_004502642.1	TIGRFAM: Conserved hypothetical protein CHP00251; HAMAP: Protein of unknown function DUF167; KEGG: spe:Spro_4033 hypothetical protein; PFAM: Protein of unknown function DUF167
YP_004502643.1	PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase rdgB; KEGG: spe:Spro_4034 putative deoxyribonucleotide triphosphate pyrophosphatase
YP_004502644.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; KEGG: spe:Spro_4035 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004502645.1	KEGG: spe:Spro_4037 hypothetical protein
YP_004502646.1	KEGG: spe:Spro_4038 hypothetical protein
YP_004502647.1	KEGG: spe:Spro_4039 hypothetical protein
YP_004502648.1	PFAM: Glutaminase, core; TIGRFAM: glutaminase A; HAMAP: Glutaminase, core; KEGG: spe:Spro_4040 glutaminase
YP_004502649.1	PFAM: Protein of unknown function DUF469; KEGG: spe:Spro_4041 hypothetical protein
YP_004502650.1	TIGRFAM: tRNA (guanine-N-7) methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; KEGG: spe:Spro_4042 tRNA (guanine-N(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase
YP_004502651.1	TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; KEGG: spe:Spro_4043 adenine DNA glycosylase; SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004502652.1	KEGG: spe:Spro_4044 hypothetical protein; HAMAP: Fe(II) trafficking protein YggX; PFAM: Fe(II) trafficking protein YggX
YP_004502653.1	KEGG: spe:Spro_4045 murein transglycosylase C; HAMAP: Membrane-bound lytic murein transglycosylase C; PFAM: Lytic transglycosylase-like, catalytic
YP_004502654.1	TIGRFAM: 2-methylcitrate dehydratase PrpD; KEGG: ecz:ECS88_0345 2-methylcitrate dehydratase; PFAM: MmgE/PrpD
YP_004502655.1	TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: esc:Entcl_1378 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase-like
YP_004502656.1	TIGRFAM: Methylisocitrate lyase; KEGG: sei:SPC_0378 2-methylisocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004502657.1	TIGRFAM: Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, propionate catabolism activator, N-terminal; Helix-turn-helix, Fis-type; KEGG: cko:CKO_02831 hypothetical protein; SMART: ATPase, AAA+ type, core
YP_004502658.1	KEGG: spe:Spro_4047 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal
YP_004502659.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: rah:Rahaq_0965 alpha/beta hydrolase fold protein
YP_004502660.1	KEGG: rah:Rahaq_0964 beta-lactamase domain protein
YP_004502661.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rah:Rahaq_0963 LysR family transcriptional regulator
YP_004502662.1	PFAM: Helix-turn-helix, HxlR type; KEGG: azl:AZL_019780 HTH-type transcriptional regulator
YP_004502663.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: sma:SAV_7198 hydrolase
YP_004502665.1	PFAM: Transcription regulator LuxR, C-terminal; KEGG: spe:Spro_0399 LuxR family transcriptional regulator
YP_004502666.1	KEGG: spe:Spro_0398 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502667.1	PFAM: Cation/H+ exchanger; KEGG: pfl:PFL_3608 sodium/hyrdogen antiporter
YP_004502668.1	PFAM: Flavin reductase-like, FMN-binding
YP_004502669.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bpd:BURPS668_A2888 PrnD
YP_004502670.1	PFAM: FAD dependent oxidoreductase; KEGG: bac:BamMC406_5266 FAD dependent oxidoreductase
YP_004502671.1	PFAM: Protein of unknown function DUF1864; KEGG: bac:BamMC406_5265 hypothetical protein
YP_004502672.1	PFAM: Tryptophan halogenase; KEGG: bpl:BURPS1106A_A2733 tryptophan halogenase PrnA
YP_004502673.1	KEGG: rer:RER_05570 hypothetical protein
YP_004502674.1	PFAM: ABC-2 type transporter; KEGG: xbo:XBJ1_2944 hypothetical protein
YP_004502675.1	PFAM: ABC transporter-like; KEGG: xbo:XBJ1_2945 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004502676.1	PFAM: Condensation domain; KEGG: scl:sce8256 non-ribosomal peptide synthetase
YP_004502677.1	KEGG: sur:STAUR_4158 polyketide synthase subunit; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding
YP_004502678.1	TIGRFAM: Amino acid adenylation; KEGG: hoh:Hoch_1748 amino acid adenylation protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004502679.1	TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: bcg:BCG9842_B2873 bacitracin synthetase 1; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain
YP_004502680.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: xbo:XBJ1_2948 putative NAD(P)-binding amidase-type enzyme with nitrilase/N-carbamoyl-D-aminoacid amidohydrolase
YP_004502681.1	KEGG: xbo:XBJ1_2949 hypothetical protein; TIGRFAM: Thioester reductase; PFAM: Male sterility, NAD-binding
YP_004502682.1	KEGG: xbo:XBJ1_2950 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502683.1	TIGRFAM: PfaD family protein; KEGG: pay:PAU_00916 hypothetical protein; PFAM: Aminotransferase class-III; 2-nitropropane dioxygenase, NPD
YP_004502684.1	KEGG: pay:PAU_00915 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004502685.1	TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; KEGG: xbo:XBJ1_2953 hypothetical protein; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR
YP_004502686.1	KEGG: pay:PAU_00912 hypothetical protein
YP_004502687.1	PFAM: Protein of unknown function DUF214, permase predicted; KEGG: ctt:CtCNB1_0139 membrane protein spanning subunit
YP_004502688.1	PFAM: ABC transporter-like; KEGG: agr:AGROH133_14945 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004502689.1	PFAM: Secretion protein HlyD; KEGG: ccs:CCNA_02174 multidrug resistance efflux pump
YP_004502690.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: plu:plu0992 4'-phosphopantetheinyl transferase
YP_004502691.1	KEGG: ter:Tery_3479 hypothetical protein
YP_004502692.1	KEGG: aca:ACP_2295 pyridoxal-dependent decarboxylase conserved domain protein; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004502693.1	KEGG: mme:Marme_2119 hypothetical protein
YP_004502695.1	KEGG: kva:Kvar_2762 thiamine pyrophosphate protein TPP binding domain protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004502696.1	KEGG: bgl:bglu_2g19760 hypothetical protein
YP_004502697.1	PFAM: AIG2-like; KEGG: bgl:bglu_2g19790 hypothetical protein
YP_004502699.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: bgl:bglu_2g19800 glutathione S-transferase, N-terminal domain-containing protein
YP_004502700.1	KEGG: bba:Bd1131 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004502701.1	KEGG: bgl:bglu_2g19700 mandelate racemase/muconate lactonizing enzyme-like protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal
YP_004502702.1	KEGG: bgl:bglu_2g19710 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004502703.1	TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family; KEGG: bgl:bglu_2g19730 Nrd protein
YP_004502704.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: bgl:bglu_2g19740 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004502705.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: bgl:bglu_2g19750 dihydroxy-acid dehydratase
YP_004502706.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: zmn:Za10_1439 transcriptional regulator, LysR family
YP_004502708.1	KEGG: spe:Spro_2440 NifA subfamily transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF
YP_004502709.1	KEGG: spe:Spro_2439 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal
YP_004502710.1	KEGG: spe:Spro_2438 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein
YP_004502711.1	KEGG: spe:Spro_2437 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC
YP_004502712.1	KEGG: spe:Spro_2436 hydrogenase nickel incorporation protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_004502713.1	TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: spe:Spro_2435 hydrogenase nickel incorporation protein; PFAM: Hydrogenase nickel incorporation protein HypA/HybF
YP_004502714.1	KEGG: spe:Spro_2434 formate hydrogenlyase regulatory protein HycA
YP_004502715.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: spe:Spro_2433 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004502716.1	KEGG: spe:Spro_2432 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004502717.1	KEGG: spe:Spro_2431 respiratory-chain NADH dehydrogenase subunit 1
YP_004502718.1	PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; Nickel-dependent hydrogenase, large subunit; NADH-quinone oxidoreductase, subunit D; KEGG: spe:Spro_2430 NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_004502719.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: spe:Spro_2429 formate hydrogenlyase complex iron-sulfur subunit
YP_004502720.1	PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: spe:Spro_2428 NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004502721.1	PFAM: Formate hydrogenlyase maturation HycH; KEGG: spe:Spro_2427 formate hydrogenlyase maturation HycH
YP_004502722.1	KEGG: spe:Spro_2426 hydrogenase 3 maturation protease; TIGRFAM: Peptidase A31, hydrogenase maturation protease HycI; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein
YP_004502723.1	PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: spe:Spro_2425 electron transport protein HydN
YP_004502724.1	TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: spe:Spro_2424 formate dehydrogenase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region
YP_004502725.1	KEGG: spe:Spro_2423 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type
YP_004502726.1	KEGG: spe:Spro_2422 high-affinity nickel-transporter; TIGRFAM: Nickel/cobalt transporter, high-affinity, bacteria; PFAM: Nickel/cobalt transporter, high-affinity
YP_004502727.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4192 GCN5-related N-acetyltransferase
YP_004502728.1	KEGG: spe:Spro_4193 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004502729.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: spe:Spro_4194 cytosine/purines uracil thiamine allantoin permease
YP_004502730.1	PFAM: NIPSNAP; KEGG: rlg:Rleg_2901 NIPSNAP family containing protein
YP_004502731.1	SMART: Helix-turn-helix type 3; KEGG: spe:Spro_4195 XRE family transcriptional regulator
YP_004502732.1	KEGG: spe:Spro_4196 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165
YP_004502733.1	PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; HAMAP: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: spe:Spro_4197 7-cyano-7-deazaguanine reductase
YP_004502734.1	TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence; KEGG: spe:Spro_4198 phospholipase C; PFAM: Phosphoesterase; Protein of unknown function DUF756
YP_004502735.1	PFAM: Virulence-related outer membrane protein; KEGG: ent:Ent638_3136 virulence-related outer membrane protein
YP_004502736.1	SMART: Helix-turn-helix type 3; KEGG: rva:Rvan_0295 helix-turn-helix domain protein
YP_004502737.1	PFAM: Protein of unknown function DUF1228; KEGG: esc:Entcl_1548 hypothetical protein
YP_004502739.1	PFAM: Virulence-related outer membrane protein; KEGG: ent:Ent638_3136 virulence-related outer membrane protein
YP_004502741.1	PFAM: Protein of unknown function DUF638, haemagglutinin/haemolysin putative; KEGG: rah:Rahaq_4220 filamentous hemagglutinin family outer membrane protein
YP_004502742.1	KEGG: esc:Entcl_4323 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF596
YP_004502743.1	KEGG: cro:ROD_49941 putative haemolysin/haemagglutinin
YP_004502744.1	KEGG: dze:Dd1591_1922 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004502745.1	PFAM: Protein of unknown function DUF1813, HSP20-like; KEGG: pva:Pvag_0917 hypothetical protein
YP_004502746.1	KEGG: yen:YE3452 hypothetical protein
YP_004502747.1	KEGG: cro:ROD_49941 putative haemolysin/haemagglutinin; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Adhesin HecA 20-residue repeat x2; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; Protein of unknown function DUF638, haemagglutinin/haemolysin putative
YP_004502748.1	PFAM: RTX toxin-activating protein C, bacteria; KEGG: cro:ROD_49931 putative haemolysin activator HlyC
YP_004502749.1	PFAM: Polypeptide-transport-associated, ShlB-type; Haemolysin activator HlyB; KEGG: epy:EpC_28900 hemolysin activator protein
YP_004502750.1	KEGG: spe:Spro_4203 aminoimidazole riboside kinase; PFAM: Carbohydrate/purine kinase
YP_004502751.1	KEGG: spe:Spro_4204 hypothetical protein
YP_004502752.1	TIGRFAM: Phosphotransferase system, sucrose-specific IIBC component; Phosphotransferase system, glucose-like IIB component; Phosphotransferase system, maltose/glucose-specific IIC component; KEGG: spe:Spro_4205 PTS system sucrose-specific transporter subunit IIBC; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site
YP_004502753.1	TIGRFAM: Sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; KEGG: spe:Spro_4206 sucrose-6-phosphate hydrolase; SMART: Glycoside hydrolase, family 32
YP_004502754.1	TIGRFAM: D-fructose-responsive transcription factor; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_4207 LacI family transcription regulator; SMART: HTH transcriptional regulator, LacI
YP_004502755.1	PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; KEGG: rah:Rahaq_3641 shikimate dehydrogenase substrate binding domain protein
YP_004502756.1	KEGG: spe:Spro_4210 TonB system transport protein ExbD type-1; TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR
YP_004502757.1	KEGG: spe:Spro_4211 TonB-system energizer ExbB type-1; TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel
YP_004502758.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: spe:Spro_4212 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004502759.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4213 hypothetical protein
YP_004502760.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_00005 LysR family transcriptional regulator
YP_004502761.1	KEGG: enc:ECL_00006 alcohol dehydrogenase protein; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004502762.1	KEGG: spe:Spro_4214 AraC family transcriptional regulator; PFAM: AraC-type transcriptional regulator, N-terminal; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004502763.1	KEGG: spe:Spro_4215 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004502764.1	KEGG: spe:Spro_4216 2,5-diketo-D-gluconate reductase A; PFAM: Aldo/keto reductase
YP_004502765.1	TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; KEGG: spe:Spro_4221 beta-glucosidase; PFAM: Glycoside hydrolase, family 1
YP_004502766.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIA subunit; KEGG: spe:Spro_4222 PTS system lactose/cellobiose-specific transporter subunit IIA
YP_004502767.1	TIGRFAM: Phosphotransferase system, lactose/cellobiose IIC component; KEGG: spe:Spro_4223 PTS system lactose/cellobiose family transporter subunit IIC; PFAM: Phosphotransferase system, EIIC
YP_004502768.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIB subunit; KEGG: spe:Spro_4224 PTS system lactose/cellobiose-specific transporter subunit IIB
YP_004502769.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: spe:Spro_4233 lytic transglycosylase catalytic
YP_004502770.1	HAMAP: UPF0313 protein ygiQ; PFAM: Radical SAM N-terminal; Radical SAM; KEGG: spe:Spro_4234 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB
YP_004502771.1	PFAM: Carbohydrate/purine kinase; KEGG: dda:Dd703_3608 PfkB domain protein
YP_004502772.1	KEGG: spe:Spro_4254 nucleoside transporter; TIGRFAM: Nucleoside:H+ symporter; PFAM: Nucleoside:H+ symporter
YP_004502773.1	TIGRFAM: Purine nucleotide phosphorylase; Inosine guanosine/xanthosine phosphorylase; KEGG: spe:Spro_4255 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase
YP_004502774.1	KEGG: spe:Spro_4256 DNA-binding transcriptional activator XapR; manually curated; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR
YP_004502775.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: spe:Spro_4257 repressor protein for FtsI
YP_004502776.1	SMART: Phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: spe:Spro_4258 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase
YP_004502777.1	SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: spe:Spro_4259 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004502778.1	PFAM: Flavodoxin-like fold; KEGG: spe:Spro_4260 NAD(P)H dehydrogenase (quinone)
YP_004502779.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: spe:Spro_4261 antibiotic biosynthesis monooxygenase
YP_004502780.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4262 LysR family transcriptional regulator
YP_004502781.1	SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; TIGRFAM: DNA topoisomerase IV, subunit B, Gram-negative; KEGG: spe:Spro_4263 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; DNA topoisomerase, type IIA, subunit B, C-terminal
YP_004502782.1	PFAM: Uncharacterised protein family UPF0227; KEGG: spe:Spro_4264 esterase YqiA
YP_004502783.1	PFAM: Calcineurin-like phosphoesterase C-terminal; Metallophosphoesterase; KEGG: spe:Spro_4265 cyclic 3',5'-adenosine monophosphate phosphodiesterase
YP_004502784.1	PFAM: Protein of unknown function DUF1249; KEGG: spe:Spro_4266 hypothetical protein
YP_004502785.1	TIGRFAM: Nucleoside diphosphate pyrophosphatase; KEGG: spe:Spro_4267 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase domain
YP_004502786.1	KEGG: spe:Spro_4268 outer membrane channel protein; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004502787.1	KEGG: spe:Spro_4269 DNA-binding transcriptional regulator DhaR; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; GAF; Helix-turn-helix, Fis-type; SMART: PAS
YP_004502788.1	TIGRFAM: Dihydroxyacetone kinase, subunit phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; KEGG: spe:Spro_4270 dihydroxyacetone kinase subunit M; PFAM: Phosphotransferase system, fructose subfamily IIA component; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region
YP_004502789.1	KEGG: spe:Spro_4271 dihydroxyacetone kinase, L subunit; TIGRFAM: Dihydroxyacetone kinase, subunit L; PFAM: Dak phosphatase
YP_004502790.1	TIGRFAM: Dihydroxyacetone kinase DhaK, subunit 1; KEGG: spe:Spro_4272 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase
YP_004502791.1	KEGG: spe:Spro_4273 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004502792.1	manually curated; HAMAP: UPF0441 protein ygiB; KEGG: spe:Spro_4274 hypothetical protein; PFAM: Protein of unknown function DUF1190
YP_004502793.1	KEGG: spe:Spro_4275 glutathionylspermidine synthase; PFAM: Glutathionylspermidine synthase
YP_004502794.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: spe:Spro_4284 hypothetical protein
YP_004502795.1	manually curated; HAMAP: Zinc transporter zupT; KEGG: spe:Spro_4285 zinc transporter ZupT; PFAM: Zinc/iron permease
YP_004502796.1	PFAM: Alkaline phosphatase; KEGG: rva:Rvan_1563 alkaline phosphatase; SMART: Alkaline phosphatase
YP_004502797.1	TIGRFAM: DHBP synthase RibB; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase; KEGG: spe:Spro_4286 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: DHBP synthase RibB
YP_004502798.1	PFAM: Protein of unknown function DUF526; KEGG: spe:Spro_4287 hypothetical protein
YP_004502799.1	PFAM: Amino acid permease-associated region; KEGG: spe:Spro_4288 inner membrane protein YjeH
YP_004502800.1	TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; HAMAP: Bifunctional protein hldE; KEGG: spe:Spro_4289 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase
YP_004502801.1	HAMAP: Glutamate-ammonia-ligase adenylyltransferase; KEGG: spe:Spro_4290 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
YP_004502802.1	PFAM: Adenylate cyclase; KEGG: spe:Spro_4291 adenylate cyclase
YP_004502803.1	SMART: Bacterial SH3-like region; KEGG: spe:Spro_4292 putative signal transduction protein
YP_004502804.1	SMART: Metal-dependent phosphohydrolase, HD region; HAMAP: Multifunctional CCA protein; KEGG: spe:Spro_4293 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain
YP_004502805.1	TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Undecaprenyl-diphosphatase; KEGG: spe:Spro_4294 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA
YP_004502806.1	SMART: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase; Dihydroneopterin aldolase subgroup; KEGG: spe:Spro_4295 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: Dihydroneopterin aldolase
YP_004502807.1	PFAM: Protein of unknown function DUF205; manually curated; KEGG: ypz:YPZ3_0607 hypothetical protein; TIGRFAM: Membrane protein YgiH; HAMAP: Protein of unknown function DUF205
YP_004502808.1	PFAM: Peptidase M22, glycoprotease; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; HAMAP: O-sialoglycoprotein endopeptidase; KEGG: spe:Spro_4297 putative DNA-binding/iron metalloprotein/AP endonuclease
YP_004502809.1	TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: rah:Rahaq_0614 ribosomal protein S21; PFAM: Ribosomal protein S21
YP_004502810.1	TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; DNA primase, DnaB-helicase binding domain; DNA primase DnaG, DnaB-binding; KEGG: spe:Spro_4299 DNA primase; SMART: DNA primase DnaG, DnaB-binding; Zinc finger, CHC2-type; Toprim domain, subgroup
YP_004502811.1	manually curated; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; KEGG: spe:Spro_4300 RNA polymerase sigma factor RpoD; PFAM: RNA polymerase sigma factor 70, non-essential region; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004502812.1	PFAM: Uracil-DNA glycosylase-like; KEGG: spe:Spro_4301 G/U mismatch-specific DNA glycosylase
YP_004502813.1	PFAM: HPP; KEGG: spe:Spro_4302 HPP family protein
YP_004502814.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: spe:Spro_4303 glutathione S-transferase domain-containing protein
YP_004502815.1	PFAM: Amino acid transporter, transmembrane; KEGG: spe:Spro_4304 aromatic amino acid permease
YP_004502816.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: spe:Spro_4305 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004502817.1	TIGRFAM: 4-aminobutyrate aminotransferase, bacterial; KEGG: spe:Spro_4306 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III
YP_004502818.1	KEGG: spe:Spro_4307 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR
YP_004502819.1	KEGG: spe:Spro_4308 ABC transporter-like protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004502820.1	KEGG: spe:Spro_4309 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; HI0933-like protein
YP_004502821.1	HAMAP: rRNA (guanine-N2-)-methyltransferase, RsmD; KEGG: spe:Spro_4312 rRNA (guanine-N(2)-)-methyltransferase; PFAM: Methyltransferase small
YP_004502822.1	PFAM: Protein of unknown function DUF45; KEGG: spe:Spro_4315 hypothetical protein
YP_004502823.1	PFAM: Oxidoreductase, N-terminal; KEGG: spe:Spro_4316 oxidoreductase domain-containing protein
YP_004502824.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: spe:Spro_4317 glutamine amidotransferase class-I
YP_004502825.1	KEGG: spe:Spro_4318 integral membrane protein TerC; TIGRFAM: integral membrane protein, TerC family; PFAM: Integral membrane protein TerC
YP_004502826.1	KEGG: spe:Spro_4319 serine/threonine transporter SstT; HAMAP: Serine/threonine transporter sstT; PFAM: Sodium:dicarboxylate symporter
YP_004502827.1	PFAM: Protein of unknown function, inner membrane,YgjV; KEGG: yen:YE3705 hypothetical protein
YP_004502828.1	KEGG: spe:Spro_4320 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain
YP_004502829.1	HAMAP: Uronate isomerase; KEGG: spe:Spro_4321 glucuronate isomerase; PFAM: Uronate isomerase
YP_004502830.1	KEGG: spe:Spro_4322 D-galactonate transporter; TIGRFAM: D-galactonate transporter; PFAM: Major facilitator superfamily MFS-1
YP_004502831.1	KEGG: spe:Spro_4323 DNA-binding transcriptional repressor ExuR; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR
YP_004502832.1	KEGG: spe:Spro_4324 putative lipoprotein
YP_004502833.1	PFAM: SNARE associated Golgi protein; KEGG: spe:Spro_4325 hypothetical protein
YP_004502834.1	KEGG: spe:Spro_4326 hypothetical protein
YP_004502835.1	PFAM: Protein of unknown function DUF1090; KEGG: spe:Spro_4327 hypothetical protein
YP_004502836.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: spe:Spro_4328 hypothetical protein
YP_004502837.1	PFAM: Protein of unknown function DUF2311, membrane; KEGG: spe:Spro_4329 hypothetical protein
YP_004502838.1	KEGG: spe:Spro_4330 hypothetical protein
YP_004502839.1	PFAM: DoxX; KEGG: spe:Spro_4331 DoxX family protein
YP_004502840.1	KEGG: spe:Spro_4332 hypothetical protein
YP_004502841.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spe:Spro_4333 LysR family transcriptional regulator
YP_004502842.1	PFAM: Pirin, N-terminal; KEGG: spe:Spro_4334 pirin domain-containing protein
YP_004502843.1	TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: spe:Spro_4335 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: Tetrapyrrole methylase
YP_004502844.1	PFAM: LppC putative lipoprotein; KEGG: spe:Spro_4336 LppC family lipoprotein
YP_004502845.1	TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: spe:Spro_4337 hypothetical protein; PFAM: Uncharacterised protein family UPF0102
YP_004502846.1	KEGG: spe:Spro_4338 DnaA initiator-associating protein DiaA; HAMAP: DnaA initiator-associating protein diaA; PFAM: Sugar isomerase (SIS)
YP_004502847.1	KEGG: spe:Spro_4339 hypothetical protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation region, bacteria
YP_004502848.1	TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; HAMAP: Monofunctional biosynthetic peptidoglycan transglycosylase; KEGG: spe:Spro_4340 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51
YP_004502849.1	PFAM: ThiJ/PfpI; KEGG: spe:Spro_4341 isoprenoid biosynthesis protein with amidotransferase-like domain
YP_004502850.1	TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: spe:Spro_4342 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region
YP_004502851.1	TIGRFAM: Conserved hypothetical protein CHP01212; PFAM: Radical SAM; KEGG: spe:Spro_4343 putative radical SAM protein; SMART: Elongator protein 3/MiaB/NifB
YP_004502852.1	KEGG: spe:Spro_4344 glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal
YP_004502853.1	TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 2; KEGG: spe:Spro_4345 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004502854.1	PFAM: Stringent starvation protein B; KEGG: spe:Spro_4346 ClpXP protease specificity-enhancing factor
YP_004502855.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: spe:Spro_4347 stringent starvation protein A
YP_004502856.1	PFAM: Ribosomal protein S9; KEGG: pwa:Pecwa_0300 30S ribosomal protein S9
YP_004502857.1	KEGG: spe:Spro_4349 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_004502858.1	PFAM: ATPase, AFG1-like; KEGG: spe:Spro_4350 AFG1 family ATPase
YP_004502859.1	PFAM: Protein of unknown function DUF1043; KEGG: spe:Spro_4351 cytochrome d ubiquinol oxidase subunit III
YP_004502860.1	TIGRFAM: Peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: spe:Spro_4352 protease Do; SMART: PDZ/DHR/GLGF
YP_004502861.1	TIGRFAM: Peptidase S1C, DegS; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: spe:Spro_4353 serine endoprotease; SMART: PDZ/DHR/GLGF
YP_004502862.1	PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: spe:Spro_4354 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_004502863.1	PFAM: BolA-like protein; KEGG: spe:Spro_4355 BolA family protein
YP_004502864.1	PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: spe:Spro_4356 anti-sigma-factor antagonist
YP_004502865.1	PFAM: Toluene tolerance; KEGG: spe:Spro_4357 toluene tolerance family protein
YP_004502866.1	PFAM: Mammalian cell entry related; KEGG: spe:Spro_4358 hypothetical protein
YP_004502867.1	KEGG: spe:Spro_4359 hypothetical protein; TIGRFAM: Protein of unknown function DUF140; PFAM: Protein of unknown function DUF140
YP_004502868.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4360 putative ABC transporter ATP-binding protein YrbF; SMART: ATPase, AAA+ type, core
YP_004502869.1	KEGG: spe:Spro_4361 putative calcium/sodium:proton antiporter; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; PFAM: Sodium/calcium exchanger membrane region
YP_004502870.1	TIGRFAM: KpsF/GutQ; KEGG: spe:Spro_4362 D-arabinose 5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_004502871.1	TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KEGG: spe:Spro_4363 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3
YP_004502872.1	PFAM: Protein of unknown function DUF1239; KEGG: spe:Spro_4364 hypothetical protein
YP_004502873.1	KEGG: spe:Spro_4365 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA-like protein
YP_004502874.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4366 putative ABC transporter ATP-binding protein YhbG; SMART: ATPase, AAA+ type, core
YP_004502875.1	KEGG: spe:Spro_4367 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54
YP_004502876.1	KEGG: spe:Spro_4368 putative sigma(54) modulation protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004502877.1	KEGG: spe:Spro_4369 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2
YP_004502878.1	HAMAP: ATPase, P-loop-containing; KEGG: spe:Spro_4370 hypothetical protein
YP_004502879.1	KEGG: spe:Spro_4371 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_004502880.1	KEGG: spe:Spro_4372 transcriptional antiterminator, BglG; PFAM: PRD; Helix-turn-helix, type 11; M trans-acting positive regulator; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2
YP_004502881.1	KEGG: spe:Spro_4373 6-phosphogluconolactonase; PFAM: Domain of unknown function DUF2394
YP_004502882.1	KEGG: spe:Spro_4374 hypothetical protein; TIGRFAM: Protein of unknown function DUF1341; PFAM: Protein of unknown function DUF1341
YP_004502883.1	KEGG: spe:Spro_4375 pyridoxal phosphate-dependent enzyme; TIGRFAM: Pyridoxal phosphate-dependent enzyme, SelA-like; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004502884.1	KEGG: spe:Spro_4376 dihydroorotase; TIGRFAM: Amidohydrolase EF0837/AHA3915, putative; PFAM: Amidohydrolase 1
YP_004502885.1	TIGRFAM: Conserved hypothetical protein CHP03579, EF0830/AHA391; KEGG: spe:Spro_4377 hypothetical protein
YP_004502886.1	TIGRFAM: Conserved hypothetical protein CHP03580, EF0832/AHA3913; KEGG: spe:Spro_4378 hypothetical protein
YP_004502887.1	TIGRFAM: Conserved hypothetical protein CHP03578, EF0831/AHA3912; KEGG: spe:Spro_4379 hypothetical protein
YP_004502888.1	TIGRFAM: Conserved hypothetical protein CHP03577, EF0830/AHA3911; KEGG: spe:Spro_4380 hypothetical protein
YP_004502889.1	KEGG: spe:Spro_4381 PRD domain-containing protein; TIGRFAM: PRD domain protein, EF0829/AHA3910; PFAM: PRD
YP_004502890.1	KEGG: spe:Spro_4382 nucleoside diphosphate kinase regulator
YP_004502891.1	PFAM: Protein of unknown function DUF81; KEGG: kpu:KP1_2835 hypothetical protein
YP_004502892.1	KEGG: aor:AOR_1_238184 hypothetical protein
YP_004502893.1	KEGG: bja:blr0577 hypothetical protein
YP_004502894.1	KEGG: pfo:Pfl01_4301 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004502895.1	PFAM: Cytochrome b562; KEGG: spe:Spro_4383 cytochrome b562
YP_004502896.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: spe:Spro_4384 peptidase PmbA
YP_004502897.1	KEGG: spe:Spro_4387 hypothetical protein; HAMAP: UPF0307 protein yjgA; PFAM: Uncharacterised protein family UPF0307
YP_004502898.1	PFAM: Barstar (barnase inhibitor); KEGG: spe:Spro_4388 barnase inhibitor
YP_004502899.1	PFAM: Guanine-specific ribonuclease N1/T1; KEGG: spe:Spro_4389 guanine-specific ribonuclease N1 and T1
YP_004502900.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: spe:Spro_4390 p-hydroxybenzoic acid efflux subunit AaeB
YP_004502901.1	TIGRFAM: Secretion protein HlyD; HAMAP: p-hydroxybenzoic acid efflux pump subunit AaeA; KEGG: spe:Spro_4391 p-hydroxybenzoic acid efflux subunit AaeA; PFAM: Secretion protein HlyD
YP_004502902.1	KEGG: spe:Spro_4392 hypothetical protein; HAMAP: Protein AaeX; PFAM: Protein of unknown function DUF1656
YP_004502903.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4393 putative DNA-binding transcriptional regulator
YP_004502904.1	KEGG: spe:Spro_4394 hypothetical protein
YP_004502905.1	KEGG: spe:Spro_4396 purine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase
YP_004502906.1	PFAM: Protein of unknown function DUF1813, HSP20-like; KEGG: pva:Pvag_0917 hypothetical protein
YP_004502907.1	PFAM: Protein of unknown function DUF1813, HSP20-like; KEGG: yen:YE3452 hypothetical protein
YP_004502908.1	manually curated; KEGG: eca:ECA0398 hypothetical protein
YP_004502909.1	KEGG: rah:Rahaq_2031 filamentous hemagglutinin family outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Adhesin HecA 20-residue repeat x2; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial; Protein of unknown function DUF638, haemagglutinin/haemolysin putative
YP_004502910.1	PFAM: Polypeptide-transport-associated, ShlB-type; Haemolysin activator HlyB; KEGG: spe:Spro_4403 polypeptide-transport-associated domain-containing protein
YP_004502911.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: spe:Spro_4404 protease TldD
YP_004502912.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spe:Spro_4405 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004502913.1	TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: spe:Spro_4406 hypothetical protein
YP_004502914.1	KEGG: spe:Spro_4407 ribonuclease G; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain
YP_004502915.1	TIGRFAM: Maf-like protein; HAMAP: Maf-like protein; KEGG: spe:Spro_4408 Maf-like protein; PFAM: Maf-like protein
YP_004502916.1	KEGG: spe:Spro_4409 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD
YP_004502917.1	KEGG: spe:Spro_4410 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_004502918.1	KEGG: spe:Spro_4411 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_004502919.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: spe:Spro_4412 regulatory protein CsrD; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted
YP_004502920.1	KEGG: spe:Spro_4413 quinone oxidoreductase putative YhdH/YhfP; TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004502921.1	KEGG: spe:Spro_4414 putative sulfite oxidase subunit YedY; HAMAP: Sulfoxide reductase catalytic subunit yedY; PFAM: Oxidoreductase, molybdopterin binding
YP_004502922.1	KEGG: spe:Spro_4415 putative sulfite oxidase subunit YedZ; HAMAP: Sulfoxide reductase heme-binding subunit yedZ; PFAM: Ferric reductase-like transmembrane component, N-terminal
YP_004502923.1	PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: spe:Spro_4416 3-dehydroquinate dehydratase
YP_004502924.1	KEGG: spe:Spro_4417 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment
YP_004502925.1	TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: spe:Spro_4418 acetyl-CoA carboxylase biotin carboxylase subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal
YP_004502926.1	PFAM: Protein of unknown function DUF997; KEGG: spe:Spro_4419 hypothetical protein
YP_004502927.1	KEGG: spe:Spro_4420 sodium/panthothenate symporter; TIGRFAM: Sodium/pantothenate symporter; Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter
YP_004502928.1	TIGRFAM: Ribosomal protein L11 methyltransferase; HAMAP: Ribosomal protein L11 methyltransferase; KEGG: spe:Spro_4421 50S ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase
YP_004502929.1	KEGG: spe:Spro_4422 carbonate dehydratase; PFAM: Carbonic anhydrase, alpha-class, catalytic domain
YP_004502930.1	manually curated; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; KEGG: spe:Spro_4423 tRNA-dihydrouridine synthase B; PFAM: tRNA-dihydrouridine synthase
YP_004502931.1	KEGG: etr:ETAE_3152 DNA-binding protein fis; HAMAP: DNA-binding protein fis; PFAM: Helix-turn-helix, Fis-type
YP_004502932.1	KEGG: spe:Spro_4425 lipid A biosynthesis palmitoleoyl acyltransferase; TIGRFAM: Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_004502933.1	KEGG: spe:Spro_4426 hypothetical protein; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004502934.1	TIGRFAM: Amino acid adenylation; KEGG: ebi:EbC_06320 similar to non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase
YP_004502935.1	PFAM: LrgB-like protein; KEGG: spe:Spro_4427 LrgB family protein
YP_004502936.1	PFAM: LrgA; KEGG: spe:Spro_4428 LrgA family protein
YP_004502937.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4429 LysR family transcriptional regulator
YP_004502938.1	KEGG: spe:Spro_4430 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, yjcE-like, bacteria; PFAM: Cation/H+ exchanger
YP_004502939.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_4431 xanthine/uracil/vitamin C permease
YP_004502940.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spe:Spro_4432 lactoylglutathione lyase
YP_004502941.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: spe:Spro_4433 glutathione S-transferase domain-containing protein
YP_004502942.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_4435 hypothetical protein
YP_004502943.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4436 LysR family transcriptional regulator
YP_004502944.1	KEGG: spe:Spro_4437 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004502945.1	KEGG: spe:Spro_4439 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_004502946.1	TIGRFAM: Excinuclease ABC, A subunit; HAMAP: UvrABC system protein A; KEGG: spe:Spro_4440 excinuclease ABC subunit A; PFAM: ABC transporter-like
YP_004502947.1	KEGG: spe:Spro_4441 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004502948.1	KEGG: spe:Spro_4442 maltose O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat
YP_004502949.1	KEGG: spe:Spro_4443 hypothetical protein
YP_004502950.1	KEGG: spe:Spro_4444 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047
YP_004502951.1	KEGG: spe:Spro_4445 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/II
YP_004502952.1	PFAM: Protein of unknown function DUF161; KEGG: pct:PC1_3503 hypothetical protein
YP_004502953.1	KEGG: spe:Spro_4446 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004502954.1	PFAM: Amino acid permease-associated region; KEGG: pao:Pat9b_0308 amino acid permease-associated protein
YP_004502955.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: spe:Spro_4447 arogenate dehydratase; SMART: Extracellular solute-binding protein, family 3
YP_004502956.1	PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: spe:Spro_4448 alanine racemase
YP_004502957.1	SMART: ATPase, AAA+ type, core; manually curated; TIGRFAM: DNA helicase, DnaB type; KEGG: spe:Spro_4449 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal
YP_004502958.1	KEGG: spe:Spro_4450 NADPH-dependent quinone oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like
YP_004502959.1	KEGG: spe:Spro_4452 phage shock protein G; TIGRFAM: Phage shock protein G; PFAM: Phage shock protein G
YP_004502960.1	KEGG: spe:Spro_4453 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase
YP_004502961.1	SMART: Tetratricopeptide repeat; KEGG: spe:Spro_4454 TPR repeat-containing protein
YP_004502962.1	KEGG: spe:Spro_4455 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004502963.1	KEGG: spe:Spro_4456 putative transmembrane anti-sigma factor
YP_004502964.1	PFAM: Ferric-uptake regulator; KEGG: spe:Spro_4457 zinc uptake transcriptional repressor
YP_004502965.1	PFAM: CsbD-like; KEGG: spe:Spro_4458 putative stress-response protein
YP_004502966.1	KEGG: spe:Spro_4459 DNA-damage-inducible SOS response protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE
YP_004502967.1	TIGRFAM: Peptidase S24, LexA repressor; HAMAP: LexA repressor; KEGG: spe:Spro_4460 LexA repressor; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region
YP_004502968.1	PFAM: Diacylglycerol kinase, prokaryotic; KEGG: spe:Spro_4461 diacylglycerol kinase
YP_004502969.1	KEGG: spe:Spro_4462 glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase; HAMAP: Glycerol-3-phosphate acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004502970.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; HAMAP: 4-hydroxybenzoate octaprenyltransferase; KEGG: spe:Spro_4463 4-hydroxybenzoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_004502971.1	HAMAP: Chorismate--pyruvate lyase; KEGG: spe:Spro_4464 chorismate pyruvate lyase; PFAM: Chorismate--pyruvate lyase
YP_004502972.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: spe:Spro_4467 inosine/uridine-preferring nucleoside hydrolase
YP_004502973.1	PFAM: Maltose operon periplasmic; KEGG: spe:Spro_4468 maltose regulon periplasmic protein
YP_004502974.1	KEGG: spe:Spro_4469 maltoporin; HAMAP: Maltoporin; PFAM: Porin, LamB type
YP_004502975.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_4470 maltose/maltodextrin transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004502976.1	KEGG: spe:Spro_4471 hypothetical protein
YP_004502977.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_4472 maltose ABC transporter periplasmic protein
YP_004502978.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4473 maltose transporter membrane protein
YP_004502979.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4474 maltose transporter permease
YP_004502980.1	KEGG: spe:Spro_4475 phosphate-starvation-inducible protein PsiE; HAMAP: Protein psiE; PFAM: Phosphate-starvation-inducible E
YP_004502981.1	KEGG: spe:Spro_4476 hypothetical protein
YP_004502982.1	HAMAP: Phosphoglucose isomerase (PGI); KEGG: spe:Spro_4477 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_004502983.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: spe:Spro_4478 sodium/hydrogen exchanger
YP_004502984.1	TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; KEGG: spe:Spro_4479 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT
YP_004502985.1	PFAM: Bile acid:sodium symporter; KEGG: spe:Spro_4480 bile acid:sodium symporter
YP_004502986.1	PFAM: Haemolysin activator HlyB; Polypeptide-transport-associated, ShlB-type; KEGG: spe:Spro_4481 hemolysin activator HlyB domain-containing protein
YP_004502987.1	KEGG: spe:Spro_4482 filamentous hemagglutinin outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial
YP_004502988.1	KEGG: spe:Spro_4483 sodium-dependent inorganic phosphate (Pi) transporter; TIGRFAM: Na/Pi-cotransporter; Na/Pi co-transporter II-related; PFAM: Na/Pi-cotransporter; PhoU
YP_004502989.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: spe:Spro_4484 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004502990.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4485 binding-protein-dependent transport systems inner membrane component
YP_004502991.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4486 binding-protein-dependent transport systems inner membrane component
YP_004502992.1	PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: spe:Spro_4487 hypothetical protein
YP_004502993.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: spe:Spro_4488 extracellular solute-binding protein
YP_004502994.1	manually curated; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: spe:Spro_4489 GntR family transcriptional regulator; SMART: HTH transcriptional regulator, GntR
YP_004502995.1	TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: spe:Spro_4490 B12-dependent methionine synthase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region
YP_004502996.1	KEGG: spe:Spro_4491 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal
YP_004502997.1	TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; KEGG: spe:Spro_4497 gluconate kinase 1; PFAM: Shikimate kinase
YP_004502998.1	KEGG: spe:Spro_4498 gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter
YP_004502999.1	TIGRFAM: 6-phosphogluconate dehydratase; KEGG: spe:Spro_4499 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004503000.1	TIGRFAM: KDPG/KHG aldolase; KEGG: spe:Spro_4500 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG/KHG aldolase
YP_004503001.1	HAMAP: Isocitrate dehydrogenase kinasephosphatase; KEGG: spe:Spro_4501 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase
YP_004503002.1	TIGRFAM: Isocitrate lyase; KEGG: spe:Spro_4502 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004503003.1	TIGRFAM: Malate synthase A; KEGG: spe:Spro_4503 malate synthase; PFAM: Malate synthase-like, core
YP_004503004.1	PFAM: Homoserine O-succinyltransferase; TIGRFAM: Homoserine O-succinyltransferase; HAMAP: Homoserine O-succinyltransferase; KEGG: spe:Spro_4504 homoserine O-succinyltransferase
YP_004503005.1	KEGG: spe:Spro_4505 putative transferase
YP_004503006.1	TIGRFAM: Quinate/shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; KEGG: spe:Spro_4506 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004503007.1	manually curated; HAMAP: ribosome maturation factor rimN; KEGG: spe:Spro_4507 putative ribosome maturation factor; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004503008.1	PFAM: DNA topoisomerase, type IA, zn finger; KEGG: spe:Spro_4508 DNA topoisomerase type IA Zn finger domain-containing protein
YP_004503009.1	PFAM: Protein of unknown function DUF494; KEGG: spe:Spro_4509 hypothetical protein
YP_004503010.1	KEGG: spe:Spro_4510 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_004503011.1	TIGRFAM: Formylmethionine deformylase; HAMAP: Formylmethionine deformylase; KEGG: spe:Spro_4511 peptide deformylase; PFAM: Formylmethionine deformylase
YP_004503012.1	PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; TIGRFAM: Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; KEGG: spe:Spro_4512 methionyl-tRNA formyltransferase
YP_004503013.1	TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase B; KEGG: spe:Spro_4513 16S rRNA methyltransferase B; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44
YP_004503014.1	PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: spe:Spro_4514 potassium transporter peripheral membrane component
YP_004503015.1	TIGRFAM: Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; KEGG: spe:Spro_4515 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel
YP_004503016.1	PFAM: Protein of unknown function DUF331; KEGG: spe:Spro_4516 hypothetical protein
YP_004503017.1	TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: spe:Spro_4517 zinc-responsive transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004503018.1	PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: ctu:Ctu_38210 hypothetical protein
YP_004503019.1	KEGG: spe:Spro_4518 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17
YP_004503020.1	SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: rah:Rahaq_0367 DNA-directed RNA polymerase, subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal
YP_004503021.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4; RNA-binding S4; KEGG: spe:Spro_4520 30S ribosomal protein S4; SMART: RNA-binding S4
YP_004503022.1	manually curated; TIGRFAM: Ribosomal protein S11, bacterial-type; KEGG: spe:Spro_4521 30S ribosomal protein S11; PFAM: Ribosomal protein S11
YP_004503023.1	KEGG: spe:Spro_4522 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_004503024.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: rah:Rahaq_0363 ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004503025.1	KEGG: spe:Spro_4524 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein
YP_004503026.1	KEGG: spe:Spro_4525 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L15
YP_004503027.1	KEGG: yen:YE3905 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30p/L7e, conserved region
YP_004503028.1	KEGG: spe:Spro_4527 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal
YP_004503029.1	KEGG: spe:Spro_4528 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_004503030.1	KEGG: spe:Spro_4529 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004503031.1	PFAM: Ribosomal protein S8; KEGG: spe:Spro_4530 30S ribosomal protein S8
YP_004503032.1	KEGG: eay:EAM_3185 30S ribosomal protein S14; HAMAP: 30S ribosomal protein S14; PFAM: Ribosomal protein S14
YP_004503033.1	PFAM: Ribosomal protein L5; KEGG: spe:Spro_4532 50S ribosomal protein L5
YP_004503034.1	KEGG: spe:Spro_4533 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; SMART: KOW
YP_004503035.1	KEGG: spe:Spro_4534 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_004503036.1	KEGG: spe:Spro_4535 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_004503037.1	KEGG: spe:Spro_4536 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_004503038.1	KEGG: spe:Spro_4537 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004503039.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: spe:Spro_4538 30S ribosomal protein S3; SMART: K Homology
YP_004503040.1	KEGG: ypb:YPTS_3885 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_004503041.1	KEGG: rah:Rahaq_0346 ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_004503042.1	KEGG: ypb:YPTS_3887 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2
YP_004503043.1	PFAM: Ribosomal protein L25/L23; KEGG: spe:Spro_4542 50S ribosomal protein L23
YP_004503044.1	PFAM: Ribosomal protein L4/L1e; KEGG: spe:Spro_4543 50S ribosomal protein L4
YP_004503045.1	KEGG: spe:Spro_4544 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_004503046.1	TIGRFAM: Ribosomal protein S10, bacterial; HAMAP: 30S ribosomal protein S10; KEGG: aat:D11S_0075 30S ribosomal protein S10; PFAM: Ribosomal protein S10
YP_004503047.1	KEGG: spe:Spro_4546 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004503048.1	PFAM: BFD-like [2Fe-2S]-binding region; KEGG: spe:Spro_4547 BFD/(2Fe-2S)-binding domain-containing protein
YP_004503049.1	KEGG: spe:Spro_4548 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal
YP_004503050.1	KEGG: spe:Spro_4549 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004503051.1	KEGG: spe:Spro_4550 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_004503052.1	KEGG: spe:Spro_4551 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; PFAM: Ribosomal protein S12/S23
YP_004503053.1	TIGRFAM: Sulphur relay, TusB/DsrH; HAMAP: Protein tusB; KEGG: spe:Spro_4552 sulfur transfer complex subunit TusB; PFAM: Sulphur relay, TusB/DsrH
YP_004503054.1	TIGRFAM: Sulphur relay, TusC/DsrF; HAMAP: Protein tusC; KEGG: spe:Spro_4553 sulfur relay protein TusC; PFAM: Sulphur relay, DsrE-like protein
YP_004503055.1	TIGRFAM: Sulphur relay, TusD/DsrE; HAMAP: Sulfurtransferase tusD; KEGG: spe:Spro_4554 sulfur transfer complex subunit TusD; PFAM: Sulphur relay, DsrE-like protein
YP_004503056.1	PFAM: YheO-like; KEGG: spe:Spro_4555 YheO domain-containing protein
YP_004503057.1	KEGG: spe:Spro_4556 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004503059.1	KEGG: spe:Spro_4557 SlyX family protein; HAMAP: Protein slyX; PFAM: SlyX
YP_004503060.1	KEGG: spe:Spro_4558 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004503061.1	KEGG: spe:Spro_4559 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02443; PFAM: Conserved hypothetical protein CHP02443
YP_004503062.1	KEGG: spe:Spro_4560 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004503063.1	KEGG: spe:Spro_4561 glutathione-regulated potassium-efflux system ancillary protein KefG; HAMAP: Glutathione-regulated potassium-efflux system ancillary protein kefG; PFAM: Flavodoxin-like fold
YP_004503064.1	KEGG: spe:Spro_4562 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004503065.1	KEGG: spe:Spro_4563 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004503066.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_4564 taurine transporter subunit
YP_004503067.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4565 taurine transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004503068.1	TIGRFAM: Taurine ABC transporter, periplasmic binding protein; PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: spe:Spro_4566 taurine transporter substrate binding subunit; SMART: Extracellular solute-binding protein, family 3
YP_004503069.1	KEGG: spe:Spro_4574 PhzF family phenazine biosynthesis protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004503070.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spe:Spro_4575 lysine exporter protein LysE/YggA
YP_004503071.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: spe:Spro_4576 putative hydrolase
YP_004503072.1	KEGG: spe:Spro_4577 hypothetical protein; HAMAP: UPF0270 protein yheU; PFAM: Uncharacterised protein family UPF0270
YP_004503073.1	KEGG: spe:Spro_4578 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase
YP_004503074.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: spe:Spro_4579 hypothetical protein
YP_004503075.1	KEGG: pct:PC1_3853 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp
YP_004503076.1	TIGRFAM: Integral membrane protein, YccS/YhfK; KEGG: spe:Spro_4581 YccS/YhfK family integral membrane protein
YP_004503077.1	PFAM: Aminotransferase class-III; TIGRFAM: Succinylornithine transaminase family; Acetylornithine/succinylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; KEGG: spe:Spro_4582 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
YP_004503078.1	TIGRFAM: Glutamine amidotransferase of anthranilate synthase; KEGG: spe:Spro_4583 para-aminobenzoate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004503079.1	PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; KEGG: spe:Spro_4584 hypothetical protein
YP_004503080.1	KEGG: spe:Spro_4585 hypothetical protein
YP_004503081.1	manually curated; TIGRFAM: Addiction module toxin, RelE/StbE; KEGG: spe:Spro_4586 addiction module antitoxin; PFAM: Plasmid stabilisation system
YP_004503082.1	KEGG: spe:Spro_4587 putative two-component response-regulatory protein YehT; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region
YP_004503083.1	KEGG: spe:Spro_4588 signal transduction histidine kinase LytS; PFAM: Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; Signal transduction histidine kinase, internal region; ATP-binding region, ATPase-like; SMART: GAF
YP_004503084.1	KEGG: spe:Spro_4589 peptidyl-prolyl cis-trans isomerase A; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004503085.1	PFAM: Phosphotransferase system, lactose/cellobiose-specific IIA subunit; KEGG: spe:Spro_4590 PTS system lactose/cellobiose-specific transporter subunit IIA
YP_004503086.1	KEGG: spe:Spro_4591 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 4
YP_004503087.1	KEGG: spe:Spro_4592 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004503088.1	KEGG: spe:Spro_4593 hypothetical protein; HAMAP: Protein tsgA; PFAM: Major facilitator superfamily MFS-1
YP_004503089.1	KEGG: spe:Spro_4594 cytosine deaminase; PFAM: Amidohydrolase 3
YP_004503090.1	TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: spe:Spro_4595 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S region
YP_004503091.1	KEGG: spe:Spro_4596 nitrite reductase small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD
YP_004503092.1	KEGG: spe:Spro_4597 nitrite transporter NirC; TIGRFAM: Formate/nitrite transporter; PFAM: Formate/nitrite transporter
YP_004503093.1	PFAM: Tetrapyrrole methylase; Sirohaem synthase, dimerisation domain; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; Sirohaem synthase, N-terminal; HAMAP: Siroheme synthase; KEGG: spe:Spro_4598 siroheme synthase
YP_004503094.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: spe:Spro_4599 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_004503095.1	PFAM: Haloacid dehalogenase-like hydrolase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 2; HAD-superfamily hydrolase, subfamily IA, variant 1; HAMAP: Phosphoglycolate phosphatase; KEGG: spe:Spro_4600 phosphoglycolate phosphatase
YP_004503096.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: spe:Spro_4601 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_004503097.1	KEGG: spe:Spro_4602 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_004503098.1	PFAM: Sporulation/cell division region, bacteria; KEGG: spe:Spro_4603 hypothetical protein
YP_004503099.1	PFAM: 3-dehydroquinate synthase AroB; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; HAMAP: 3-dehydroquinate synthase; KEGG: spe:Spro_4604 3-dehydroquinate synthase
YP_004503100.1	HAMAP: Shikimate kinase; KEGG: spe:Spro_4605 shikimate kinase I; PFAM: Shikimate kinase
YP_004503101.1	KEGG: spe:Spro_4606 putative outer membrane porin HofQ; TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; NolW-like; Secretin/TonB, short N-terminal
YP_004503102.1	KEGG: spe:Spro_4607 hypothetical protein
YP_004503103.1	KEGG: spe:Spro_4608 hypothetical protein
YP_004503104.1	PFAM: Fimbrial assembly; KEGG: spe:Spro_4609 fimbrial assembly family protein
YP_004503105.1	KEGG: spe:Spro_4610 hypothetical protein
YP_004503106.1	TIGRFAM: Penicillin-binding protein 1A; KEGG: spe:Spro_4611 peptidoglycan synthetase; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004503107.1	PFAM: NUDIX hydrolase domain; KEGG: spe:Spro_4612 ADP-ribose diphosphatase NudE
YP_004503108.1	PFAM: Intracellular growth attenuator IgaA; KEGG: spe:Spro_4613 intracellular growth attenuator IgaA
YP_004503109.1	KEGG: spe:Spro_4614 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004503110.1	KEGG: spe:Spro_4615 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_004503111.1	KEGG: spe:Spro_4616 HSP33-like chaperonin; HAMAP: Heat shock protein Hsp33 protein; PFAM: Heat shock protein Hsp33 protein
YP_004503112.1	PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; KEGG: spe:Spro_4617 phosphoenolpyruvate carboxykinase
YP_004503113.1	KEGG: spe:Spro_4618 hypothetical protein
YP_004503114.1	PFAM: PilT protein, N-terminal; KEGG: spe:Spro_4619 PilT domain-containing protein
YP_004503115.1	KEGG: spe:Spro_4620 osmolarity sensor protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004503116.1	KEGG: spe:Spro_4621 osmolarity response regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region
YP_004503117.1	TIGRFAM: Transcription elongation factor GreB, prokaryotic; HAMAP: Transcription elongation factor greA; KEGG: spe:Spro_4626 transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic
YP_004503118.1	KEGG: spe:Spro_4627 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold
YP_004503119.1	PFAM: Ferrous iron transporter, FeoA subunit; KEGG: spe:Spro_4628 ferrous iron transport protein A
YP_004503120.1	KEGG: spe:Spro_4629 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal
YP_004503121.1	KEGG: spe:Spro_4630 hypothetical protein; HAMAP: Ferrous iron transport protein C; PFAM: FeoC like transcriptional regulator
YP_004503122.1	PFAM: Protein of unknown function DUF1471; KEGG: spe:Spro_4631 hypothetical protein
YP_004503123.1	PFAM: Alpha/beta hydrolase fold-1; TIGRFAM: BioH; HAMAP: Carboxylesterase bioH; KEGG: spe:Spro_4632 BioH protein
YP_004503124.1	PFAM: Phosphoribosyltransferase; KEGG: spe:Spro_4633 gluconate periplasmic binding protein
YP_004503125.1	KEGG: spe:Spro_4634 putative DNA uptake protein; TIGRFAM: Fe/S biogenesis protein, nfuA; PFAM: FeS cluster biogenesis; NIF system FeS cluster assembly, NifU, C-terminal
YP_004503126.1	TIGRFAM: Glycoside hydrolase, family 77; KEGG: spe:Spro_4635 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77
YP_004503127.1	KEGG: spe:Spro_4636 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35
YP_004503129.1	HAMAP: HTH-type transcriptional regulator malT; PFAM: Transcription regulator LuxR, C-terminal; KEGG: spe:Spro_4637 transcriptional regulator MalT; SMART: Transcription regulator LuxR, C-terminal
YP_004503130.1	SMART: Rhodanese-like; HAMAP: Thiosulfate sulfurtransferase glpE; KEGG: spe:Spro_4638 thiosulfate sulfurtransferase; PFAM: Rhodanese-like
YP_004503131.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ddc:Dd586_3834 major facilitator superfamily protein
YP_004503132.1	KEGG: pwa:Pecwa_4126 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00022; PFAM: Conserved hypothetical protein CHP00022
YP_004503133.1	PFAM: Dihydrodipicolinate synthetase; KEGG: ddd:Dda3937_00342 dihydrodipicolinate synthase
YP_004503134.1	PFAM: Carbohydrate/purine kinase; HTH transcriptional regulator, DeoR N-terminal; KEGG: rah:Rahaq_3574 ribokinase; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004503135.1	HAMAP: Rhomboid protease glpG; KEGG: spe:Spro_4639 intramembrane serine protease GlpG; PFAM: Peptidase S54, rhomboid
YP_004503136.1	KEGG: spe:Spro_4640 DNA-binding transcriptional repressor GlpR; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004503137.1	KEGG: spe:Spro_4642 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004503138.1	TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; KEGG: spe:Spro_4643 glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35
YP_004503139.1	PFAM: Starch synthase catalytic region; Glycosyl transferase, group 1; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; HAMAP: Glycogen/starch synthases, ADP-glucose type; KEGG: spe:Spro_4644 glycogen synthase
YP_004503140.1	PFAM: Nucleotidyl transferase; TIGRFAM: Glucose-1-phosphate adenylyltransferase; HAMAP: Glucose-1-phosphate adenylyltransferase; KEGG: spe:Spro_4645 glucose-1-phosphate adenylyltransferase
YP_004503141.1	KEGG: spe:Spro_4646 glycogen debranching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; TIGRFAM: Glycogen debranching enzyme GlgX; HAMAP: Glycogen debranching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004503142.1	KEGG: spe:Spro_4647 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic region; Alpha-amylase, C-terminal all beta; TIGRFAM: 1,4-alpha-glucan branching enzyme, core region; HAMAP: 1,4-alpha-glucan branching enzyme, core region; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region
YP_004503143.1	TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; KEGG: spe:Spro_4648 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding
YP_004503144.1	KEGG: spe:Spro_4649 putative dITP- and XTP- hydrolase; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004503145.1	KEGG: spe:Spro_4650 gluconate kinase 1; TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase
YP_004503146.1	KEGG: spe:Spro_4651 gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter
YP_004503147.1	KEGG: spe:Spro_4652 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004503148.1	PFAM: Pirin, N-terminal; KEGG: spe:Spro_4653 pirin domain-containing protein
YP_004503149.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_4654 GCN5-related N-acetyltransferase
YP_004503150.1	PFAM: Peptidase S58, DmpA; KEGG: spe:Spro_4655 peptidase S58 DmpA
YP_004503151.1	HAMAP: Inosose dehydratase; KEGG: spe:Spro_4656 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain
YP_004503152.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: spe:Spro_4657 xylose isomerase domain-containing protein
YP_004503153.1	HAMAP: Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; KEGG: spe:Spro_4658 inositol 2-dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal
YP_004503154.1	KEGG: spe:Spro_4659 thiamine pyrophosphate protein central region; PFAM: Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004503155.1	KEGG: spe:Spro_4660 ribokinase-like domain-containing protein; PFAM: Protein of unknown function DUF2090; Carbohydrate/purine kinase
YP_004503156.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: spe:Spro_4661 RpiR family transcriptional regulator
YP_004503157.1	KEGG: pao:Pat9b_0888 hypothetical protein
YP_004503158.1	KEGG: yen:YE0485 hypothetical protein
YP_004503159.1	KEGG: spe:Spro_4662 myo-inositol catabolism IolB domain-containing protein
YP_004503160.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: spe:Spro_4663 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase
YP_004503161.1	KEGG: spe:Spro_4664 sugar transporter; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter
YP_004503162.1	PFAM: Xylose isomerase, TIM barrel domain; KEGG: spe:Spro_4665 xylose isomerase domain-containing protein
YP_004503163.1	KEGG: spe:Spro_4666 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00245; PFAM: Conserved hypothetical protein CHP00245
YP_004503164.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4667 putative ABC transporter ATP-binding protein YbbL; SMART: ATPase, AAA+ type, core
YP_004503165.1	KEGG: spe:Spro_4668 hypothetical protein
YP_004503166.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: spe:Spro_4669 FKBP-type peptidylprolyl isomerase
YP_004503167.1	KEGG: spe:Spro_4670 hypothetical protein
YP_004503168.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4671 fimbrial protein
YP_004503169.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4672 fimbrial protein
YP_004503170.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: spe:Spro_4673 fimbrial biogenesis outer membrane usher protein
YP_004503171.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: spe:Spro_4674 pili assembly chaperone
YP_004503172.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4675 fimbrial protein
YP_004503173.1	KEGG: spe:Spro_4676 type I pilus assembly protein FimE
YP_004503174.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4677 fimbrial protein
YP_004503175.1	PFAM: O-antigen ligase-related; KEGG: spe:Spro_4678 O-antigen polymerase
YP_004503176.1	KEGG: spe:Spro_4679 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004503177.1	KEGG: spe:Spro_4680 hypothetical protein
YP_004503178.1	KEGG: spe:Spro_4681 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; Helix-turn-helix, type 11; SMART: Transcription regulator, AsnC-type
YP_004503179.1	PFAM: Ureohydrolase; KEGG: pen:PSEEN2606 arginase
YP_004503182.1	PFAM: Protein of unknown function DUF330; KEGG: eca:ECA1563 putative lipoprotein
YP_004503183.1	PFAM: Mammalian cell entry related; KEGG: pct:PC1_1445 mammalian cell entry related domain protein
YP_004503184.1	PFAM: Paraquat-inducible protein A; KEGG: pct:PC1_1446 paraquat-inducible protein A
YP_004503185.1	PFAM: Paraquat-inducible protein A; KEGG: pct:PC1_1447 paraquat-inducible protein A
YP_004503186.1	KEGG: eca:ECA1567 putative lipoprotein
YP_004503187.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pct:PC1_1443 transcriptional regulator, TetR family
YP_004503188.1	KEGG: ect:ECIAI39_1606 putative lipoprotein
YP_004503191.1	KEGG: spe:Spro_4688 hypothetical protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein
YP_004503192.1	PFAM: Phosphate transporter; KEGG: spe:Spro_4689 phosphate transporter
YP_004503193.1	KEGG: spe:Spro_4690 universal stress protein UspB; HAMAP: Universal stress protein B; PFAM: Universal stress protein B
YP_004503194.1	PFAM: UspA; KEGG: spe:Spro_4691 UspA domain-containing protein
YP_004503195.1	KEGG: spe:Spro_4692 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region
YP_004503196.1	KEGG: spe:Spro_4693 carbohydrate ABC transporter periplasmic-binding protein
YP_004503197.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4694 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004503198.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_4695 monosaccharide-transporting ATPase
YP_004503199.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_4696 monosaccharide-transporting ATPase
YP_004503200.1	TIGRFAM: Carbohydrate kinase, FGGY-related; KEGG: spe:Spro_4697 FGGY-family pentulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004503201.1	PFAM: Sugar isomerase (SIS); KEGG: spe:Spro_4698 sugar isomerase (SIS)
YP_004503202.1	KEGG: spe:Spro_4700 putative methyltransferase; HAMAP: Protein of unknown function DUF548; PFAM: Protein of unknown function DUF548
YP_004503203.1	KEGG: spe:Spro_4701 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_004503204.1	PFAM: Histidine triad (HIT) protein; KEGG: spe:Spro_4709 histidine triad (HIT) protein
YP_004503205.1	PFAM: ASCH domain; KEGG: spe:Spro_4712 hypothetical protein
YP_004503206.1	PFAM: Protein of unknown function DUF519; KEGG: spe:Spro_4713 hypothetical protein
YP_004503207.1	TIGRFAM: Glutathione reductase, animal/bacterial; KEGG: spe:Spro_4714 glutathione reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004503208.1	PFAM: Polypeptide-transport-associated, ShlB-type; Bacterial surface antigen (D15); KEGG: pap:PSPA7_5176 polypeptide-transport-associated domain-containing protein
YP_004503209.1	KEGG: pag:PLES_49241 large exoprotein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; GLUG
YP_004503211.1	KEGG: eta:ETA_02690 hypothetical protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004503212.1	PFAM: O-antigen ligase-related; KEGG: spe:Spro_4715 O-antigen polymerase
YP_004503213.1	KEGG: eta:ETA_02670 hypothetical protein
YP_004503214.1	PFAM: Fimbrial protein, C-terminal; KEGG: eta:ETA_02660 MrfH protein
YP_004503215.1	PFAM: Fimbrial protein, C-terminal; KEGG: eta:ETA_02650 MrfF protein
YP_004503216.1	KEGG: eta:ETA_02640 MrfE protein
YP_004503217.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4721 fimbrial protein
YP_004503218.1	PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: eta:ETA_02620 MrfD protein
YP_004503219.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: eta:ETA_02610 MrfC protein
YP_004503220.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4724 fimbrial protein
YP_004503221.1	PFAM: Fimbrial protein, C-terminal; KEGG: spe:Spro_4725 fimbrial protein
YP_004503222.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: spe:Spro_4726 transcriptional regulator CadC
YP_004503223.1	KEGG: spe:Spro_4727 hypothetical protein
YP_004503224.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: spe:Spro_4728 transcriptional regulator CadC
YP_004503225.1	KEGG: spe:Spro_4729 filamentous hemagglutinin outer membrane protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial; Adhesin HecA 20-residue repeat x2; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; Filamentous haemagglutinin, bacterial
YP_004503226.1	PFAM: Haemolysin activator HlyB; Polypeptide-transport-associated, ShlB-type; KEGG: spe:Spro_4730 hemolysin activator HlyB domain-containing protein
YP_004503227.1	PFAM: DinB; KEGG: spe:Spro_4731 DinB family protein
YP_004503228.1	KEGG: spe:Spro_4732 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004503229.1	KEGG: spe:Spro_4733 hypothetical protein
YP_004503230.1	PFAM: Oxidoreductase, molybdopterin binding; KEGG: spe:Spro_4734 oxidoreductase molybdopterin binding
YP_004503231.1	KEGG: spe:Spro_4735 integral membrane sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region
YP_004503232.1	PFAM: BetR; KEGG: spe:Spro_4736 response regulator receiver protein
YP_004503233.1	KEGG: spe:Spro_4737 outer membrane autotransporter; TIGRFAM: Outer membrane autotransporter barrel; Autotransporter-associated beta strand repeat; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Autotransporter beta-domain
YP_004503234.1	KEGG: spe:Spro_4738 outer membrane autotransporter; TIGRFAM: Outer membrane autotransporter barrel; Autotransporter-associated beta strand repeat; PFAM: Autotransporter beta-domain; Peptidase S8/S53, subtilisin/kexin/sedolisin
YP_004503235.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_4739 TetR family transcriptional regulator
YP_004503236.1	KEGG: spe:Spro_4740 hypothetical protein; HAMAP: UPF0261 protein; PFAM: Uncharacterised conserved protein UCP033271
YP_004503237.1	PFAM: TIM-barrel signal transduction protein, predicted; KEGG: pwa:Pecwa_3413 TIM-barrel signal transduction protein
YP_004503238.1	PFAM: Domain of unknown function, Spy-related; KEGG: spe:Spro_4741 periplasmic protein
YP_004503239.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold-4; KEGG: spe:Spro_4742 RNase II stability modulator; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS
YP_004503240.1	PFAM: Crotonase, core; KEGG: spe:Spro_4743 enoyl-CoA hydratase
YP_004503241.1	KEGG: spe:Spro_4744 putative ribonuclease; TIGRFAM: Conserved hypothetical protein CHP00766, YhjD; PFAM: Ribonuclease BN-related
YP_004503242.1	KEGG: spe:Spro_4745 major facilitator superfamily metabolite/H(+) symporter; TIGRFAM: Citrate-proton symport; PFAM: General substrate transporter
YP_004503243.1	HAMAP: CDP-diacylglycerol pyrophosphatase; KEGG: spe:Spro_4746 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase, bacterial
YP_004503244.1	PFAM: AsmA; KEGG: spe:Spro_4747 AsmA family protein
YP_004503245.1	KEGG: spe:Spro_4748 EAL domain-containing protein; PFAM: Diguanylate phosphodiesterase, predicted; SMART: Diguanylate phosphodiesterase, predicted
YP_004503246.1	KEGG: spe:Spro_4749 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase, subgroup; PFAM: 4-oxalocrotonate tautomerase
YP_004503247.1	KEGG: spe:Spro_4750 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004503248.1	PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; TIGRFAM: Acetohydroxy acid isomeroreductase; HAMAP: Ketol-acid reductoisomerase; KEGG: spe:Spro_4751 ketol-acid reductoisomerase
YP_004503249.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4752 DNA-binding transcriptional regulator IlvY
YP_004503250.1	PFAM: Conserved hypothetical protein CHP02453; KEGG: spe:Spro_4753 hypothetical protein
YP_004503251.1	KEGG: spe:Spro_4756 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal
YP_004503252.1	PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; HAMAP: Dihydroxy-acid dehydratase; KEGG: spe:Spro_4757 dihydroxy-acid dehydratase
YP_004503253.1	TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: spe:Spro_4758 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004503254.1	KEGG: spe:Spro_4759 acetolactate synthase 2 regulatory subunit
YP_004503255.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: spe:Spro_4760 acetolactate synthase 2 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004503256.1	KEGG: sgl:SG2398 IlvG operon leader peptide; manually curated; PFAM: IlvGEDA operon leader peptide
YP_004503257.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_4761 major facilitator transporter
YP_004503258.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: spe:Spro_4762 Mg chelatase subunit ChlI; SMART: ATPase, AAA+ type, core
YP_004503259.1	PFAM: Protein of unknown function DUF413; KEGG: spe:Spro_4763 hypothetical protein
YP_004503260.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: spe:Spro_4764 transcriptional regulator HdfR
YP_004503261.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_4765 inner membrane ABC transporter permease YjfF
YP_004503262.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_4766 monosaccharide-transporting ATPase
YP_004503263.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4767 ABC transporter-like protein; SMART: ATPase, AAA+ type, core
YP_004503264.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_4768 periplasmic binding protein/LacI transcriptional regulator
YP_004503265.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: spe:Spro_4769 glutamate racemase
YP_004503266.1	TIGRFAM: TonB-dependent vitamin B12 receptor; HAMAP: Vitamin B12 transporter btuB; KEGG: spe:Spro_4770 vitamin B12/cobalamin outer membrane transporter; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004503267.1	TIGRFAM: tRNA (uracil-5-)-methyltransferase; HAMAP: tRNA (uracil-5-)-methyltransferase; KEGG: spe:Spro_4771 tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase
YP_004503268.1	PFAM: Protein of unknown function DUF1422; KEGG: spe:Spro_4772 hypothetical protein
YP_004503269.1	PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: spe:Spro_4773 DNA-binding transcriptional repressor FabR
YP_004503270.1	HAMAP: Soluble pyridine nucleotide transhydrogenase; KEGG: spe:Spro_4774 soluble pyridine nucleotide transhydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004503271.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4775 DNA-binding transcriptional regulator OxyR
YP_004503272.1	KEGG: spe:Spro_4776 glutaredoxin family protein; TIGRFAM: Glutaredoxin-like region; PFAM: Redoxin; Glutaredoxin
YP_004503273.1	KEGG: spe:Spro_4777 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004503274.1	PFAM: Fumarate lyase; TIGRFAM: Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; KEGG: spe:Spro_4778 argininosuccinate lyase
YP_004503275.1	PFAM: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; KEGG: spe:Spro_4779 argininosuccinate synthase
YP_004503276.1	TIGRFAM: Acetylglutamate kinase; KEGG: spe:Spro_4780 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_004503277.1	PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: spe:Spro_4781 N-acetyl-gamma-glutamyl-phosphate reductase
YP_004503278.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; TIGRFAM: Acetylornithine deacetylase (ArgE); HAMAP: Acetylornithine deacetylase; KEGG: spe:Spro_4782 acetylornithine deacetylase
YP_004503279.1	HAMAP: Phosphoenolpyruvate carboxylase; KEGG: spe:Spro_4783 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_004503280.1	KEGG: rah:Rahaq_3618 AraC family transcriptional regulator; PFAM: AraC protein, arabinose-binding/dimerisation; Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain
YP_004503281.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rah:Rahaq_3619 lysine exporter protein (LysE/YggA)
YP_004503282.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: spe:Spro_4784 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_004503283.1	KEGG: spe:Spro_4785 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: Aspartate kinase region; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Aspartate/homoserine dehydrogenase, NAD-binding
YP_004503284.1	KEGG: spe:Spro_4786 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004503285.1	KEGG: rah:Rahaq_4305 methionine repressor, MetJ; HAMAP: Met repressor; PFAM: Methionine repressor MetJ
YP_004503286.1	TIGRFAM: Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; KEGG: spe:Spro_4788 50S ribosomal protein L31; PFAM: Ribosomal protein L31
YP_004503287.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_4789 primosome assembly protein PriA; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004503288.1	KEGG: spe:Spro_4790 DNA-binding transcriptional regulator CytR; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004503289.1	KEGG: spe:Spro_4791 cell division protein FtsN; TIGRFAM: Cell division protein FtsN; PFAM: Sporulation/cell division region, bacteria
YP_004503290.1	TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; HAMAP: ATP-dependent protease hslV; KEGG: spe:Spro_4792 ATP-dependent protease peptidase subunit; PFAM: Proteasome, subunit alpha/beta
YP_004503291.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Heat shock protein HslU; KEGG: spe:Spro_4793 ATP-dependent protease ATP-binding subunit HslU; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; PFAM: ATPase associated with various cellular activities, AAA-2
YP_004503292.1	KEGG: spe:Spro_4794 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase
YP_004503293.1	TIGRFAM: Ribonuclease E inhibitor RraA, gammaproteobacteria; Ribonuclease E inhibitor RraA; HAMAP: Ribonuclease E inhibitor RraA; KEGG: spe:Spro_4795 ribonuclease activity regulator protein RraA; PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
YP_004503294.1	KEGG: spe:Spro_4796 hypothetical protein; HAMAP: Cell division protein ZapB; PFAM: Cell division protein ZapB
YP_004503295.1	KEGG: spe:Spro_4797 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein
YP_004503296.1	PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; TIGRFAM: Glycerol kinase; HAMAP: Glycerol kinase; KEGG: spe:Spro_4798 glycerol kinase
YP_004503297.1	TIGRFAM: GlpX; KEGG: spe:Spro_4799 fructose 1,6-bisphosphatase II; PFAM: GlpX
YP_004503298.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_4800 multidrug resistance protein D
YP_004503299.1	KEGG: spe:Spro_4801 putative transcriptional regulator
YP_004503300.1	KEGG: spe:Spro_4802 ferredoxin-NADP reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region
YP_004503301.1	PFAM: Protein of unknown function DUF805; KEGG: spe:Spro_4803 hypothetical protein
YP_004503302.1	PFAM: Protein of unknown function DUF1454; KEGG: spe:Spro_4804 hypothetical protein
YP_004503303.1	TIGRFAM: Triosephosphate isomerase; KEGG: spe:Spro_4805 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_004503304.1	KEGG: spe:Spro_4806 sulfate transporter subunit; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004503305.1	PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; KEGG: spe:Spro_4807 6-phosphofructokinase
YP_004503306.1	TIGRFAM: Cation efflux protein; HAMAP: Ferrous-iron efflux pump fieF; KEGG: spe:Spro_4808 ferrous iron efflux protein F; PFAM: Cation efflux protein
YP_004503307.1	PFAM: Domain of unknown function, Spy-related; KEGG: spe:Spro_4809 periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses
YP_004503308.1	KEGG: spe:Spro_4810 DNA-binding transcriptional regulator CpxR; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal
YP_004503309.1	KEGG: spe:Spro_4811 two-component sensor protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain
YP_004503310.1	KEGG: spe:Spro_4812 putative tRNA/rRNA methyltransferase YibK; TIGRFAM: RNA methyltransferase TrmH, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004503311.1	PFAM: CHAD; KEGG: pfl:PFL_4290 hypothetical protein
YP_004503312.1	KEGG: spe:Spro_4813 hypothetical protein
YP_004503313.1	TIGRFAM: Serine O-acetyltransferase; KEGG: spe:Spro_4814 serine acetyltransferase; PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide repeat
YP_004503314.1	KEGG: spe:Spro_4815 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal
YP_004503315.1	TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: spe:Spro_4816 preprotein translocase subunit SecB; PFAM: Bacterial protein export chaperone SecB
YP_004503316.1	KEGG: spe:Spro_4817 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin
YP_004503317.1	KEGG: spe:Spro_4818 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004503318.1	PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: spe:Spro_4819 phosphoglyceromutase
YP_004503319.1	KEGG: spe:Spro_4820 hypothetical protein; manually curated; PFAM: Peptidase M23
YP_004503320.1	PFAM: Protein of unknown function DUF610, YibQ; KEGG: spe:Spro_4821 hypothetical protein
YP_004503321.1	PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; TIGRFAM: L-threonine 3-dehydrogenase; HAMAP: L-threonine 3-dehydrogenase; KEGG: spe:Spro_4823 L-threonine 3-dehydrogenase
YP_004503322.1	TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: spe:Spro_4824 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/II
YP_004503323.1	PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; HAMAP: ADP-L-glycero-D-manno-heptose-6-epimerase; KEGG: spe:Spro_4825 ADP-L-glycero-D-mannoheptose-6-epimerase
YP_004503324.1	KEGG: spe:Spro_4826 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase II; PFAM: Glycosyl transferase, family 9
YP_004503325.1	KEGG: spe:Spro_4827 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9
YP_004503326.1	PFAM: Glycosyl transferase, group 1; KEGG: eta:ETA_00820 glycosyl transferase, group 1
YP_004503327.1	PFAM: O-antigen ligase-related; KEGG: eta:ETA_00810 lipid A core, surface polymer ligase WaaL
YP_004503328.1	PFAM: Glycosyl transferase, family 2; KEGG: epy:EpC_00910 predicted glycosyl transferase, family 2
YP_004503329.1	PFAM: Glycosyl transferase, family 9; KEGG: eay:EAM_0084 glycosyl transferase
YP_004503330.1	KEGG: spe:Spro_4831 WalW protein
YP_004503331.1	KEGG: spe:Spro_4832 lipopolysaccharide heptosyltransferase III; TIGRFAM: Lipopolysaccharide heptosyltransferase III, putative; PFAM: Glycosyl transferase, family 9
YP_004503332.1	PFAM: Glycosyl transferase, group 1; KEGG: spe:Spro_4833 group 1 glycosyl transferase
YP_004503333.1	PFAM: Glycosyl transferase, group 1; KEGG: spe:Spro_4834 group 1 glycosyl transferase
YP_004503334.1	PFAM: Glycosyl transferase, family 9; KEGG: spe:Spro_4835 glycosyl transferase family protein
YP_004503335.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Glycosyl transferase, group 1; KEGG: spe:Spro_4836 3-deoxy-D-manno-octulosonic-acid transferase
YP_004503336.1	PFAM: Glycosyl transferase, family 2; KEGG: spe:Spro_4837 glycosyl transferase family protein
YP_004503337.1	PFAM: Cytidylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; HAMAP: Coenzyme A biosynthesis protein; KEGG: spe:Spro_4838 phosphopantetheine adenylyltransferase
YP_004503338.1	PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain; TIGRFAM: DNA glycosylase/AP lyase; HAMAP: Formamidopyrimidine-DNA glycosylase; KEGG: spe:Spro_4839 formamidopyrimidine-DNA glycosylase
YP_004503339.1	TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: pwa:Pecwa_4388 50S ribosomal protein L33; PFAM: Ribosomal protein L33
YP_004503340.1	KEGG: spe:Spro_4841 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28
YP_004503341.1	TIGRFAM: DNA repair, RadC-like; HAMAP: UPF0758 protein yicR; KEGG: spe:Spro_4842 DNA repair protein RadC; PFAM: DNA repair, RadC-like
YP_004503342.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: spe:Spro_4843 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein
YP_004503343.1	PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1,; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; KEGG: spe:Spro_4844 deoxyuridine 5'-triphosphate nucleotidohydrolase
YP_004503344.1	KEGG: spe:Spro_4845 nucleoid occlusion protein; HAMAP: HTH-type protein slmA; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal
YP_004503345.1	PFAM: Phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase; HAMAP: Orotate phosphoribosyltransferase; KEGG: spe:Spro_4846 orotate phosphoribosyltransferase
YP_004503346.1	PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; HAMAP: Ribonuclease phosphorolytic, bacterial-type; KEGG: spe:Spro_4847 ribonuclease PH
YP_004503347.1	KEGG: spe:Spro_4848 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732
YP_004503348.1	KEGG: spe:Spro_4860 hypothetical protein
YP_004503349.1	KEGG: spe:Spro_4861 nucleoside transporter; TIGRFAM: Concentrative nucleoside transporter, metazoan/bacterial; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition
YP_004503350.1	KEGG: spe:Spro_4862 hypothetical protein
YP_004503351.1	PFAM: Uncharacterised protein family UPF0126; KEGG: spe:Spro_4863 hypothetical protein
YP_004503352.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4864 LysR family transcriptional regulator
YP_004503353.1	PFAM: Major facilitator superfamily MFS-1; KEGG: spe:Spro_4865 major facilitator transporter
YP_004503354.1	KEGG: spe:Spro_4867 guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; HAMAP: Guanylate kinase, sub-group; SMART: Guanylate kinase/L-type calcium channel region
YP_004503355.1	KEGG: spe:Spro_4868 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_004503356.1	SMART: Metal-dependent phosphohydrolase, HD region; TIGRFAM: RelA/SpoT protein; KEGG: spe:Spro_4869 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS
YP_004503357.1	manually curated; KEGG: spe:Spro_4870 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU
YP_004503358.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal
YP_004503359.1	KEGG: spe:Spro_4872 sodium/glutamate symporter; TIGRFAM: Sodium/glutamate symporter; PFAM: Sodium/glutamate symporter
YP_004503360.1	KEGG: spe:Spro_4873 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004503361.1	PFAM: AsmA; KEGG: spe:Spro_4874 AsmA family protein
YP_004503362.1	KEGG: spe:Spro_4876 thioesterase domain-containing protein; TIGRFAM: Thioesterase, putative; PFAM: Thioesterase, putative; GCN5-related N-acetyltransferase
YP_004503363.1	TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: spe:Spro_4877 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004503364.1	TIGRFAM: Ribonuclease BN; HAMAP: UPF0761 membrane protein yihY; KEGG: spe:Spro_4878 ribonuclease BN; PFAM: Ribonuclease BN-related
YP_004503365.1	KEGG: spe:Spro_4879 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004503366.1	KEGG: spe:Spro_4880 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_004503367.1	KEGG: spe:Spro_4881 glutamine synthetase; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp
YP_004503368.1	KEGG: spe:Spro_4882 nitrogen regulation protein NR(II); PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS
YP_004503369.1	TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; KEGG: spe:Spro_4883 nitrogen regulation protein NR(I); SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core
YP_004503370.1	manually curated; KEGG: pct:PC1_4223 hypothetical protein
YP_004503371.1	TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: spe:Spro_4884 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004503372.1	KEGG: spe:Spro_4885 hypothetical protein; HAMAP: UPF0241 protein yihI; PFAM: Protein of unknown function DUF414
YP_004503373.1	TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: spe:Spro_4886 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related
YP_004503374.1	TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: spe:Spro_4887 DNA polymerase I; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain
YP_004503375.1	KEGG: spe:Spro_4888 putative acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004503376.1	PFAM: DSBA oxidoreductase; KEGG: spe:Spro_4889 periplasmic protein disulfide isomerase I
YP_004503377.1	PFAM: Aminoglycoside phosphotransferase; KEGG: spe:Spro_4890 serine/threonine protein kinase
YP_004503378.1	PFAM: Protein of unknown function DUF1040; KEGG: spe:Spro_4891 hypothetical protein
YP_004503379.1	KEGG: spe:Spro_4892 molybdopterin-guanine dinucleotide biosynthesis protein MobA; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004503380.1	KEGG: spe:Spro_4893 molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region
YP_004503381.1	KEGG: spe:Spro_4894 GntR domain-containing protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004503382.1	KEGG: spe:Spro_4895 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004503383.1	KEGG: spe:Spro_4896 transcriptional repressor RbsR; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004503384.1	TIGRFAM: Ribokinase, bacterial; KEGG: spe:Spro_4897 ribokinase; PFAM: Carbohydrate/purine kinase
YP_004503385.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_4898 D-ribose transporter subunit RbsB
YP_004503386.1	PFAM: Bacterial inner-membrane translocator; KEGG: spe:Spro_4899 ribose ABC transporter permease
YP_004503387.1	PFAM: ABC transporter-like; KEGG: spe:Spro_4900 D-ribose transporter ATP binding protein; SMART: ATPase, AAA+ type, core
YP_004503388.1	KEGG: spe:Spro_4901 D-ribose pyranase; HAMAP: D-ribose pyranase; PFAM: RbsD/FucU transport
YP_004503389.1	TIGRFAM: Potassium uptake protein, kup; HAMAP: Low affinity potassium transport system protein kup; KEGG: spe:Spro_4902 potassium transport protein Kup; PFAM: K+ potassium transporter
YP_004503390.1	KEGG: spe:Spro_4903 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core
YP_004503391.1	KEGG: spe:Spro_4904 hypothetical protein; HAMAP: Protein viaA; SMART: von Willebrand factor, type A
YP_004503392.1	PFAM: Aspartate--ammonia ligase; TIGRFAM: Aspartate--ammonia ligase; HAMAP: Aspartate--ammonia ligase; KEGG: spe:Spro_4905 asparagine synthetase AsnA
YP_004503393.1	KEGG: spe:Spro_4906 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type
YP_004503394.1	PFAM: Flavodoxin/nitric oxide synthase; KEGG: spe:Spro_4907 flavodoxin
YP_004503395.1	TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: spe:Spro_4908 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related
YP_004503396.1	TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: spe:Spro_4909 16S rRNA methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G
YP_004503397.1	PFAM: ATPase, F0 complex, subunit I, proteobacteria-type; KEGG: spe:Spro_0001 F0F1 ATP synthase subunit I
YP_004503398.1	TIGRFAM: ATPase, F0 complex, subunit A; HAMAP: ATP synthase subunit a; KEGG: rah:Rahaq_4410 ATP synthase F0 A subunit; PFAM: ATPase, F0 complex, subunit A
YP_004503399.1	TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: rah:Rahaq_4411 ATP synthase F0 C subunit; PFAM: ATPase, F0/V0 complex, subunit C
YP_004503400.1	TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATP synthase subunit b; KEGG: spe:Spro_0004 F0F1 ATP synthase subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_004503401.1	TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; HAMAP: ATPase, F1 complex, OSCP/delta subunit; KEGG: spe:Spro_0005 F0F1 ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004503402.1	TIGRFAM: ATPase, F1 complex, alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; KEGG: spe:Spro_0006 F0F1 ATP synthase subunit alpha; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_004503403.1	TIGRFAM: ATPase, F1 complex, gamma subunit; HAMAP: ATP synthase gamma chain; KEGG: spe:Spro_0007 F0F1 ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit
YP_004503404.1	TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; KEGG: spe:Spro_0008 F0F1 ATP synthase subunit beta; SMART: ATPase, AAA+ type, core
YP_004503405.1	KEGG: spe:Spro_0009 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal
YP_004503406.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Bacterial transferase hexapeptide repeat; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: spe:Spro_0010 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
YP_004503407.1	PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; KEGG: spe:Spro_0011 glucosamine--fructose-6-phosphate aminotransferase
YP_004503409.1	KEGG: spe:Spro_0012 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004503410.1	KEGG: spe:Spro_0013 phosphate transporter permease subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004503411.1	KEGG: spe:Spro_0014 phosphate transporter permease subunit PtsA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004503412.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: spe:Spro_0015 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like
YP_004503413.1	KEGG: spe:Spro_0016 transcriptional regulator PhoU; TIGRFAM: PhoU; PFAM: PhoU
YP_004503414.1	KEGG: spe:Spro_0017 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004503415.1	KEGG: spe:Spro_0018 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004503416.1	KEGG: spe:Spro_0019 polar amino acid ABC transporter inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004503417.1	KEGG: spe:Spro_0020 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004503418.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: spe:Spro_0021 xanthine/uracil/vitamin C permease
YP_004503419.1	KEGG: spe:Spro_0022 hypothetical protein
YP_004503420.1	PFAM: NADPH-dependent FMN reductase; KEGG: spe:Spro_0023 NADPH-dependent FMN reductase
YP_004503421.1	KEGG: spe:Spro_0024 hypothetical protein
YP_004503422.1	TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; HAMAP: tRNA modification GTPase TrmE; KEGG: spe:Spro_0027 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_004503423.1	TIGRFAM: Membrane insertion protein, OxoA/YidC, N-terminal; Membrane insertion protein, OxaA/YidC, core; HAMAP: Membrane protein oxaA; KEGG: spe:Spro_0028 putative inner membrane protein translocase component YidC; PFAM: Membrane insertion protein, OxaA/YidC
YP_004503424.1	TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: spe:Spro_0029 hypothetical protein; PFAM: Protein of unknown function DUF37
YP_004503425.1	PFAM: Ribonuclease P; manually curated; KEGG: spe:Spro_0030 ribonuclease P; TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P
YP_004503426.1	PFAM: Ribosomal protein L34; manually curated; KEGG: xne:XNC1_4646 50S ribosomal subunit protein L34; TIGRFAM: Ribosomal protein L34; HAMAP: 50S ribosomal protein L34