-- dump date 20140620_062918 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001471678.1 157362819 5602416 complement(15..1004) 1 NC_009829.1 PFAM: late control D family protein; KEGG: drm:Dred_1216 phage late control D family protein; late control D family protein 1004 5602416 Spro_4910 Serratia proteamaculans 568 late control D family protein YP_001471678.1 15 R 399741 CDS YP_001471679.1 157362820 5602448 complement(1209..3653) 1 NC_009829.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: syc:syc0782_c putative bacteriophage protein; TP901 family phage tail tape measure protein 3653 5602448 Spro_4911 Serratia proteamaculans 568 TP901 family phage tail tape measure protein YP_001471679.1 1209 R 399741 CDS YP_001471680.1 157362821 5602423 complement(3821..4096) 1 NC_009829.1 KEGG: drm:Dred_1214 hypothetical protein; hypothetical protein 4096 5602423 Spro_4912 Serratia proteamaculans 568 hypothetical protein YP_001471680.1 3821 R 399741 CDS YP_001471681.1 157362822 5602414 complement(4110..4631) 1 NC_009829.1 PFAM: major tail tube protein; KEGG: drm:Dred_1213 phage major tail tube protein; major tail tube protein 4631 5602414 Spro_4913 Serratia proteamaculans 568 major tail tube protein YP_001471681.1 4110 R 399741 CDS YP_001471682.1 157362823 5602425 complement(4642..6102) 1 NC_009829.1 KEGG: drm:Dred_1212 hypothetical protein; hypothetical protein 6102 5602425 Spro_4914 Serratia proteamaculans 568 hypothetical protein YP_001471682.1 4642 R 399741 CDS YP_001471683.1 157362824 5602424 complement(6425..6901) 1 NC_009829.1 KEGG: drm:Dred_1210 hypothetical protein; hypothetical protein 6901 5602424 Spro_4915 Serratia proteamaculans 568 hypothetical protein YP_001471683.1 6425 R 399741 CDS YP_001471684.1 157362825 5602450 complement(6898..7242) 1 NC_009829.1 KEGG: dsy:DSY2180 hypothetical protein; hypothetical protein 7242 5602450 Spro_4916 Serratia proteamaculans 568 hypothetical protein YP_001471684.1 6898 R 399741 CDS YP_001471685.1 157362826 5602406 complement(7252..7812) 1 NC_009829.1 KEGG: spu:585658 hypothetical LOC585658; hypothetical protein 7812 5602406 Spro_4917 Serratia proteamaculans 568 hypothetical protein YP_001471685.1 7252 R 399741 CDS YP_001471686.1 157362827 5602453 complement(7813..8859) 1 NC_009829.1 PFAM: major capsid protein E; KEGG: drm:Dred_1207 hypothetical protein; major capsid protein E 8859 5602453 Spro_4918 Serratia proteamaculans 568 major capsid protein E YP_001471686.1 7813 R 399741 CDS YP_001471687.1 157362828 5602422 complement(8877..9257) 1 NC_009829.1 hypothetical protein 9257 5602422 Spro_4919 Serratia proteamaculans 568 hypothetical protein YP_001471687.1 8877 R 399741 CDS YP_001471688.1 157362829 5602408 complement(9268..10365) 1 NC_009829.1 PFAM: peptidase S14 ClpP; KEGG: bam:Bamb_1874 peptidase S14, ClpP; peptidase S14 ClpP 10365 5602408 Spro_4920 Serratia proteamaculans 568 peptidase S14 ClpP YP_001471688.1 9268 R 399741 CDS YP_001471689.1 157362830 5602430 complement(10367..11941) 1 NC_009829.1 TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: drm:Dred_1204 phage portal protein, lambda family; lambda family phage portal protein 11941 5602430 Spro_4921 Serratia proteamaculans 568 lambda family phage portal protein YP_001471689.1 10367 R 399741 CDS YP_001471690.1 157362831 5602451 complement(12199..14049) 1 NC_009829.1 PFAM: terminase GpA; KEGG: drm:Dred_1203 phage terminase GpA; terminase GpA 14049 5602451 Spro_4922 Serratia proteamaculans 568 terminase GpA YP_001471690.1 12199 R 399741 CDS YP_001471691.1 157362832 5602409 complement(14052..14597) 1 NC_009829.1 KEGG: mgm:Mmc1_2754 hypothetical protein; hypothetical protein 14597 5602409 Spro_4923 Serratia proteamaculans 568 hypothetical protein YP_001471691.1 14052 R 399741 CDS YP_001471692.1 157362833 5602428 complement(14609..15199) 1 NC_009829.1 PFAM: ParB domain protein nuclease; KEGG: pde:Pden_2068 ParB domain protein nuclease; nuclease 15199 5602428 Spro_4924 Serratia proteamaculans 568 nuclease YP_001471692.1 14609 R 399741 CDS YP_001471693.1 157362834 5602420 complement(15862..16578) 1 NC_009829.1 KEGG: xfa:XF0515 hypothetical protein; hypothetical protein 16578 5602420 Spro_4925 Serratia proteamaculans 568 hypothetical protein YP_001471693.1 15862 R 399741 CDS YP_001471694.1 157362835 5602412 complement(16621..18000) 1 NC_009829.1 PFAM: ParB domain protein nuclease; nuclease 18000 5602412 Spro_4926 Serratia proteamaculans 568 nuclease YP_001471694.1 16621 R 399741 CDS YP_001471695.1 157362836 5602427 complement(17997..18608) 1 NC_009829.1 PFAM: ParB domain protein nuclease; KEGG: ecv:APECO1_517 putative transcriptional regulator; nuclease 18608 5602427 Spro_4927 Serratia proteamaculans 568 nuclease YP_001471695.1 17997 R 399741 CDS YP_001471696.1 157362837 5602429 complement(20298..20852) 1 NC_009829.1 KEGG: ent:Ent638_0796 hypothetical protein; hypothetical protein 20852 5602429 Spro_4928 Serratia proteamaculans 568 hypothetical protein YP_001471696.1 20298 R 399741 CDS YP_001471697.1 157362838 5602417 complement(20849..21313) 1 NC_009829.1 KEGG: eci:UTI89_C0932 putative endolysin; hypothetical protein 21313 5602417 Spro_4929 Serratia proteamaculans 568 hypothetical protein YP_001471697.1 20849 R 399741 CDS YP_001471698.1 157362839 5602419 complement(21508..21891) 1 NC_009829.1 KEGG: rso:RSc1933 probable phage-related transmembrane protein; putative phage-related transmembrane protein 21891 5602419 Spro_4930 Serratia proteamaculans 568 putative phage-related transmembrane protein YP_001471698.1 21508 R 399741 CDS YP_001471699.1 157362840 5602434 complement(22141..23202) 1 NC_009829.1 KEGG: ypi:YpsIP31758_2212 hypothetical protein; prophage antirepressor-like protein 23202 5602434 Spro_4931 Serratia proteamaculans 568 prophage antirepressor-like protein YP_001471699.1 22141 R 399741 CDS YP_001471700.1 157362841 5602410 complement(23616..23996) 1 NC_009829.1 KEGG: yps:YPTB1765 putative GP46 [bacteriophage N15] pir||T13133 protein GP46-...; putative GP46 23996 5602410 Spro_4932 Serratia proteamaculans 568 putative GP46 YP_001471700.1 23616 R 399741 CDS YP_001471701.1 157362842 5602452 complement(24285..25277) 1 NC_009829.1 PFAM: protein of unknown function DUF551; hypothetical protein 25277 5602452 Spro_4933 Serratia proteamaculans 568 hypothetical protein YP_001471701.1 24285 R 399741 CDS YP_001471702.1 157362843 5602431 complement(25316..25576) 1 NC_009829.1 KEGG: ecs:ECs1950 hypothetical protein; hypothetical protein 25576 5602431 Spro_4934 Serratia proteamaculans 568 hypothetical protein YP_001471702.1 25316 R 399741 CDS YP_001471703.1 157362844 5602426 complement(25804..26358) 1 NC_009829.1 hypothetical protein 26358 5602426 Spro_4935 Serratia proteamaculans 568 hypothetical protein YP_001471703.1 25804 R 399741 CDS YP_001471704.1 157362845 5602441 complement(26468..26746) 1 NC_009829.1 KEGG: pca:Pcar_0531 hypothetical protein; hypothetical protein 26746 5602441 Spro_4936 Serratia proteamaculans 568 hypothetical protein YP_001471704.1 26468 R 399741 CDS YP_001471705.1 157362846 5602439 complement(26779..27207) 1 NC_009829.1 PFAM: HNH endonuclease; KEGG: stm:PSLT094.1N hypothetical protein; HNH endonuclease 27207 5602439 Spro_4937 Serratia proteamaculans 568 HNH endonuclease YP_001471705.1 26779 R 399741 CDS YP_001471706.1 157362847 5602444 complement(27200..27568) 1 NC_009829.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: eci:UTI89_C5088 hypothetical protein; HNH endonuclease 27568 5602444 Spro_4938 Serratia proteamaculans 568 HNH endonuclease YP_001471706.1 27200 R 399741 CDS YP_001471707.1 157362848 5602456 complement(27561..28067) 1 NC_009829.1 KEGG: stt:t1914 putative methyltransferase; putative methyltransferase 28067 5602456 Spro_4939 Serratia proteamaculans 568 putative methyltransferase YP_001471707.1 27561 R 399741 CDS YP_001471708.1 157362849 5602437 complement(28067..28588) 1 NC_009829.1 KEGG: ana:all7370 hypothetical protein; hypothetical protein 28588 5602437 Spro_4940 Serratia proteamaculans 568 hypothetical protein YP_001471708.1 28067 R 399741 CDS YP_001471709.1 157362850 5602413 complement(28727..29533) 1 NC_009829.1 hypothetical protein 29533 5602413 Spro_4941 Serratia proteamaculans 568 hypothetical protein YP_001471709.1 28727 R 399741 CDS YP_001471710.1 157362851 5602442 complement(30647..30964) 1 NC_009829.1 KEGG: asa:ASA_P4G021 hypothetical protein; hypothetical protein 30964 5602442 Spro_4942 Serratia proteamaculans 568 hypothetical protein YP_001471710.1 30647 R 399741 CDS YP_001471711.1 157362852 5602445 complement(30985..31398) 1 NC_009829.1 hypothetical protein 31398 5602445 Spro_4943 Serratia proteamaculans 568 hypothetical protein YP_001471711.1 30985 R 399741 CDS YP_001471712.1 157362853 5602435 complement(31925..32323) 1 NC_009829.1 hypothetical protein 32323 5602435 Spro_4944 Serratia proteamaculans 568 hypothetical protein YP_001471712.1 31925 R 399741 CDS YP_001471713.1 157362854 5602421 complement(32326..32652) 1 NC_009829.1 PFAM: protein of unknown function DUF1064; KEGG: amt:Amet_2598 protein of unknown function DUF1064; hypothetical protein 32652 5602421 Spro_4945 Serratia proteamaculans 568 hypothetical protein YP_001471713.1 32326 R 399741 CDS YP_001471714.1 157362855 5602432 complement(33283..33717) 1 NC_009829.1 hypothetical protein 33717 5602432 Spro_4946 Serratia proteamaculans 568 hypothetical protein YP_001471714.1 33283 R 399741 CDS YP_001471715.1 157362856 5602436 35620..36264 1 NC_009829.1 KEGG: ypm:YP_pCRY27 ATPase involved in chromosome partitioning; ATPase involved in chromosome partitioning 36264 5602436 Spro_4947 Serratia proteamaculans 568 ATPase involved in chromosome partitioning YP_001471715.1 35620 D 399741 CDS YP_001471716.1 157362857 5602455 complement(37142..37366) 1 NC_009829.1 KEGG: ecs:ECs1505 hypothetical protein; hypothetical protein 37366 5602455 Spro_4948 Serratia proteamaculans 568 hypothetical protein YP_001471716.1 37142 R 399741 CDS YP_001471717.1 157362858 5602449 complement(37460..37825) 1 NC_009829.1 PFAM: helix-turn-helix domain protein; KEGG: pfl:PFL_5188 helix-turn-helix domain protein, putative; helix-turn-helix domain-containing protein 37825 5602449 Spro_4949 Serratia proteamaculans 568 helix-turn-helix domain-containing protein YP_001471717.1 37460 R 399741 CDS YP_001471718.1 157362859 5602446 complement(37825..38127) 1 NC_009829.1 KEGG: bbr:BB3160 hypothetical protein; hypothetical protein 38127 5602446 Spro_4950 Serratia proteamaculans 568 hypothetical protein YP_001471718.1 37825 R 399741 CDS YP_001471719.1 157362860 5602418 complement(38505..38771) 1 NC_009829.1 KEGG: sec:SC2625 putative bacteriophage protein; putative bacteriophage protein 38771 5602418 Spro_4951 Serratia proteamaculans 568 putative bacteriophage protein YP_001471719.1 38505 R 399741 CDS YP_001471720.1 157362861 5602411 complement(38808..39086) 1 NC_009829.1 KEGG: reu:Reut_D6449 hypothetical protein; hypothetical protein 39086 5602411 Spro_4952 Serratia proteamaculans 568 hypothetical protein YP_001471720.1 38808 R 399741 CDS YP_001471721.1 157362862 5602443 complement(39729..40586) 1 NC_009829.1 PFAM: replication initiation protein; KEGG: sgl:SGP1_0012 replication associated protein RepA1; replication initiation protein 40586 5602443 Spro_4953 Serratia proteamaculans 568 replication initiation protein YP_001471721.1 39729 R 399741 CDS YP_001471722.1 157362863 5602447 complement(41333..41845) 1 NC_009829.1 PFAM: tail assembly chaperone gp38; KEGG: spt:SPA2605 putative phage gene; tail assembly chaperone gp38 41845 5602447 Spro_4954 Serratia proteamaculans 568 tail assembly chaperone gp38 YP_001471722.1 41333 R 399741 CDS YP_001471723.1 157362864 5602407 complement(41849..43699) 1 NC_009829.1 KEGG: bte:BTH_II1333 phage-related tail fiber protein; hypothetical protein 43699 5602407 Spro_4955 Serratia proteamaculans 568 hypothetical protein YP_001471723.1 41849 R 399741 CDS YP_001471724.1 157362865 5602438 complement(43714..44190) 1 NC_009829.1 TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: xft:PD1096 phage-related tail protein; phage tail protein I 44190 5602438 Spro_4956 Serratia proteamaculans 568 phage tail protein I YP_001471724.1 43714 R 399741 CDS YP_001471725.1 157362866 5602415 complement(44291..45409) 1 NC_009829.1 PFAM: Baseplate J family protein; KEGG: drm:Dred_1220 baseplate J family protein; baseplate J family protein 45409 5602415 Spro_4957 Serratia proteamaculans 568 baseplate J family protein YP_001471725.1 44291 R 399741 CDS YP_001471726.1 157362867 5602454 complement(45406..45720) 1 NC_009829.1 hypothetical protein 45720 5602454 Spro_4958 Serratia proteamaculans 568 hypothetical protein YP_001471726.1 45406 R 399741 CDS YP_001471727.1 157362868 5602440 complement(45713..46174) 1 NC_009829.1 KEGG: drm:Dred_1218 hypothetical protein; hypothetical protein 46174 5602440 Spro_4959 Serratia proteamaculans 568 hypothetical protein YP_001471727.1 45713 R 399741 CDS YP_001471728.1 157362869 5602433 complement(46186..46704) 1 NC_009829.1 TIGRFAM: phage baseplate assembly protein V; KEGG: plu:plu3426 hypothetical protein; phage baseplate assembly protein V 46704 5602433 Spro_4960 Serratia proteamaculans 568 phage baseplate assembly protein V YP_001471728.1 46186 R 399741 CDS YP_001476239.1 157368250 5607459 565..948 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 948 5607459 Spro_0001 Serratia proteamaculans 568 F0F1 ATP synthase subunit I YP_001476239.1 565 D 399741 CDS YP_001476240.1 157368251 5604877 969..1790 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 1790 5604877 Spro_0002 Serratia proteamaculans 568 F0F1 ATP synthase subunit A YP_001476240.1 969 D 399741 CDS YP_001476241.1 157368252 5604878 1840..2079 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 2079 5604878 Spro_0003 Serratia proteamaculans 568 F0F1 ATP synthase subunit C YP_001476241.1 1840 D 399741 CDS YP_001476242.1 157368253 5604879 2137..2607 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 2607 5604879 Spro_0004 Serratia proteamaculans 568 F0F1 ATP synthase subunit B YP_001476242.1 2137 D 399741 CDS YP_001476243.1 157368254 5604948 2622..3155 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3155 5604948 Spro_0005 Serratia proteamaculans 568 F0F1 ATP synthase subunit delta YP_001476243.1 2622 D 399741 CDS YP_001476244.1 157368255 5603364 3168..4709 1 NC_009832.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4709 5603364 Spro_0006 Serratia proteamaculans 568 F0F1 ATP synthase subunit alpha YP_001476244.1 3168 D 399741 CDS YP_001476245.1 157368256 5603365 4768..5631 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 5631 5603365 Spro_0007 Serratia proteamaculans 568 F0F1 ATP synthase subunit gamma YP_001476245.1 4768 D 399741 CDS YP_001476246.1 157368257 5603366 5664..7046 1 NC_009832.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 7046 5603366 Spro_0008 Serratia proteamaculans 568 F0F1 ATP synthase subunit beta YP_001476246.1 5664 D 399741 CDS YP_001476247.1 157368258 5603367 7067..7486 1 NC_009832.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 7486 atpC 5603367 atpC Serratia proteamaculans 568 F0F1 ATP synthase subunit epsilon YP_001476247.1 7067 D 399741 CDS YP_001476248.1 157368259 5603655 7783..9153 1 NC_009832.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 9153 glmU 5603655 glmU Serratia proteamaculans 568 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001476248.1 7783 D 399741 CDS YP_001476249.1 157368260 5603656 9365..11194 1 NC_009832.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 11194 5603656 Spro_0011 Serratia proteamaculans 568 glucosamine--fructose-6-phosphate aminotransferase YP_001476249.1 9365 D 399741 CDS YP_001476250.1 157368261 5603657 11524..12564 1 NC_009832.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE4201 putative phosphate-binding periplasmic protein; phosphate ABC transporter periplasmic substrate-binding protein PstS 12564 5603657 Spro_0012 Serratia proteamaculans 568 phosphate ABC transporter periplasmic substrate-binding protein PstS YP_001476250.1 11524 D 399741 CDS YP_001476251.1 157368262 5607086 12657..13613 1 NC_009832.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease PstC 13613 pstC 5607086 pstC Serratia proteamaculans 568 phosphate transporter permease PstC YP_001476251.1 12657 D 399741 CDS YP_001476252.1 157368263 5607087 13624..14505 1 NC_009832.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease PtsA 14505 pstA 5607087 pstA Serratia proteamaculans 568 phosphate transporter permease PtsA YP_001476252.1 13624 D 399741 CDS YP_001476253.1 157368264 5607088 14554..15330 1 NC_009832.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 15330 pstB 5607088 pstB Serratia proteamaculans 568 phosphate transporter ATP-binding protein YP_001476253.1 14554 D 399741 CDS YP_001476254.1 157368265 5607089 15342..16076 1 NC_009832.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 16076 5607089 Spro_0016 Serratia proteamaculans 568 transcriptional regulator PhoU YP_001476254.1 15342 D 399741 CDS YP_001476255.1 157368266 5604076 16245..17084 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE4193 putative periplasmic solute-binding protein; extracellular solute-binding protein 17084 5604076 Spro_0017 Serratia proteamaculans 568 extracellular solute-binding protein YP_001476255.1 16245 D 399741 CDS YP_001476256.1 157368267 5604077 17162..17875 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4191 ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 17875 5604077 Spro_0018 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001476256.1 17162 D 399741 CDS YP_001476257.1 157368268 5604078 17877..18617 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4190 putative amino acid transport system permease; polar amino acid ABC transporter inner membrane subunit 18617 5604078 Spro_0019 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001476257.1 17877 D 399741 CDS YP_001476258.1 157368269 5606862 complement(18610..19275) 1 NC_009832.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 19275 5606862 Spro_0020 Serratia proteamaculans 568 6-phosphogluconate phosphatase YP_001476258.1 18610 R 399741 CDS YP_001476259.1 157368270 5606863 19501..20838 1 NC_009832.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: yps:YPTB3953 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 20838 5606863 Spro_0021 Serratia proteamaculans 568 xanthine/uracil/vitamin C permease YP_001476259.1 19501 D 399741 CDS YP_001476260.1 157368271 5606864 complement(21100..22152) 1 NC_009832.1 KEGG: pfl:PFL_5500 hypothetical protein; hypothetical protein 22152 5606864 Spro_0022 Serratia proteamaculans 568 hypothetical protein YP_001476260.1 21100 R 399741 CDS YP_001476261.1 157368272 5606865 complement(22248..22814) 1 NC_009832.1 PFAM: NADPH-dependent FMN reductase; KEGG: yen:YE4184 putative NAD(P)H-dependent FMN reductase; NADPH-dependent FMN reductase 22814 5606865 Spro_0023 Serratia proteamaculans 568 NADPH-dependent FMN reductase YP_001476261.1 22248 R 399741 CDS YP_001476262.1 157368273 5606841 complement(22989..23714) 1 NC_009832.1 KEGG: eca:ECA4463 hypothetical protein; hypothetical protein 23714 5606841 Spro_0024 Serratia proteamaculans 568 hypothetical protein YP_001476262.1 22989 R 399741 CDS YP_001476263.1 157368274 5606842 complement(23811..25124) 1 NC_009832.1 KEGG: sbo:SBO_4340 lysine:N6-hydroxylase; L-lysine 6-monooxygenase (NADPH) 25124 5606842 Spro_0025 Serratia proteamaculans 568 L-lysine 6-monooxygenase (NADPH) YP_001476263.1 23811 R 399741 CDS YP_001476264.1 157368275 5606843 complement(25247..26047) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: sec:SC2881 putative metal-dependent hydrolase of the beta-lactamase superfamily II; beta-lactamase domain-containing protein 26047 5606843 Spro_0026 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001476264.1 25247 R 399741 CDS YP_001476265.1 157368276 5606326 complement(26077..27441) 1 NC_009832.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 27441 trmE 5606326 trmE Serratia proteamaculans 568 tRNA modification GTPase TrmE YP_001476265.1 26077 R 399741 CDS YP_001476266.1 157368277 5606327 complement(27544..29181) 1 NC_009832.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 29181 5606327 Spro_0028 Serratia proteamaculans 568 putative inner membrane protein translocase component YidC YP_001476266.1 27544 R 399741 CDS YP_001476267.1 157368278 5606328 complement(29184..29441) 1 NC_009832.1 PFAM: protein of unknown function DUF37; KEGG: yps:YPTB3947 hypothetical protein; hypothetical protein 29441 5606328 Spro_0029 Serratia proteamaculans 568 hypothetical protein YP_001476267.1 29184 R 399741 CDS YP_001476268.1 157368279 5606329 complement(29405..29764) 1 NC_009832.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 29764 rnpA 5606329 rnpA Serratia proteamaculans 568 ribonuclease P YP_001476268.1 29405 R 399741 CDS YP_001476269.1 157368280 5607342 complement(29783..29923) 1 NC_009832.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 29923 rpmH 5607342 rpmH Serratia proteamaculans 568 50S ribosomal protein L34 YP_001476269.1 29783 R 399741 CDS YP_001476270.1 157368281 5607343 30606..31997 1 NC_009832.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 31997 dnaA 5607343 dnaA Serratia proteamaculans 568 chromosomal replication initiation protein YP_001476270.1 30606 D 399741 CDS YP_001476271.1 157368282 5607344 32002..33102 1 NC_009832.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 33102 5607344 Spro_0033 Serratia proteamaculans 568 DNA polymerase III subunit beta YP_001476271.1 32002 D 399741 CDS YP_001476272.1 157368283 5603525 33271..34356 1 NC_009832.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 34356 recF 5603525 recF Serratia proteamaculans 568 recombination protein F YP_001476272.1 33271 D 399741 CDS YP_001476273.1 157368284 5603526 34375..36789 1 NC_009832.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 36789 gyrB 5603526 gyrB Serratia proteamaculans 568 DNA gyrase subunit B YP_001476273.1 34375 D 399741 CDS YP_001476274.1 157368285 5603527 36913..37728 1 NC_009832.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 37728 5603527 Spro_0036 Serratia proteamaculans 568 sugar phosphatase YP_001476274.1 36913 D 399741 CDS YP_001476275.1 157368286 5603528 complement(37845..38813) 1 NC_009832.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE4167 pyridoxal-phosphate dependent enzyme; hypothetical protein 38813 5603528 Spro_0037 Serratia proteamaculans 568 hypothetical protein YP_001476275.1 37845 R 399741 CDS YP_001476276.1 157368287 5607325 complement(38810..39415) 1 NC_009832.1 PFAM: YheO domain protein; KEGG: bvi:Bcep1808_0785 transcriptional regulator, fis family; YheO domain-containing protein 39415 5607325 Spro_0038 Serratia proteamaculans 568 YheO domain-containing protein YP_001476276.1 38810 R 399741 CDS YP_001476277.1 157368288 5607326 39690..41006 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_3541 major facilitator superfamily MFS_1; major facilitator transporter 41006 5607326 Spro_0039 Serratia proteamaculans 568 major facilitator transporter YP_001476277.1 39690 D 399741 CDS YP_001476278.1 157368289 5607327 40999..41946 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pol:Bpro_3531 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 41946 5607327 Spro_0040 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001476278.1 40999 D 399741 CDS YP_001476279.1 157368290 5607209 42130..42888 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA4419 galactonate operon transcriptional repressor; GntR domain-containing protein 42888 5607209 Spro_0041 Serratia proteamaculans 568 GntR domain-containing protein YP_001476279.1 42130 D 399741 CDS YP_001476280.1 157368291 5607210 42885..43778 1 NC_009832.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: eca:ECA4418 2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxygalactonokinase 43778 5607210 Spro_0042 Serratia proteamaculans 568 2-dehydro-3-deoxygalactonokinase YP_001476280.1 42885 D 399741 CDS YP_001476281.1 157368292 5607211 43762..44379 1 NC_009832.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 44379 5607211 Spro_0043 Serratia proteamaculans 568 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_001476281.1 43762 D 399741 CDS YP_001476282.1 157368293 5607212 44376..45524 1 NC_009832.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA4416 DgoA protein [includes: 2-dehydro-3-deoxyphosphogalactonate aldolase; galactonate dehydratase]; galactonate dehydratase 45524 5607212 Spro_0044 Serratia proteamaculans 568 galactonate dehydratase YP_001476282.1 44376 D 399741 CDS YP_001476283.1 157368294 5607319 45743..47035 1 NC_009832.1 TIGRFAM: phosphoglycerate transporter; d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA4415 putative D-galactonate transporter; d-galactonate transporter 47035 5607319 Spro_0045 Serratia proteamaculans 568 d-galactonate transporter YP_001476283.1 45743 D 399741 CDS YP_001476284.1 157368295 5607320 47082..48362 1 NC_009832.1 KEGG: yen:YE4166 hypothetical protein; hypothetical protein 48362 5607320 Spro_0046 Serratia proteamaculans 568 hypothetical protein YP_001476284.1 47082 D 399741 CDS YP_001476285.1 157368296 5607321 complement(48397..48741) 1 NC_009832.1 PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 putative lipoprotein; hypothetical protein 48741 5607321 Spro_0047 Serratia proteamaculans 568 hypothetical protein YP_001476285.1 48397 R 399741 CDS YP_001476286.1 157368297 5606858 49046..49459 1 NC_009832.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 49459 5606858 Spro_0048 Serratia proteamaculans 568 heat shock protein IbpA YP_001476286.1 49046 D 399741 CDS YP_001476287.1 157368298 5606859 49568..49996 1 NC_009832.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 49996 5606859 Spro_0049 Serratia proteamaculans 568 heat shock chaperone IbpB YP_001476287.1 49568 D 399741 CDS YP_001476288.1 157368299 5606860 50164..51822 1 NC_009832.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: ypp:YPDSF_0014 membrane protein; hypothetical protein 51822 5606860 Spro_0050 Serratia proteamaculans 568 hypothetical protein YP_001476288.1 50164 D 399741 CDS YP_001476289.1 157368300 5606861 complement(51859..52239) 1 NC_009832.1 PFAM: PilT protein domain protein; KEGG: ret:RHE_PF00555 hypothetical protein; PilT domain-containing protein 52239 5606861 Spro_0051 Serratia proteamaculans 568 PilT domain-containing protein YP_001476289.1 51859 R 399741 CDS YP_001476290.1 157368301 5607289 complement(52239..52448) 1 NC_009832.1 KEGG: ecs:ECs4816 hypothetical protein; hypothetical protein 52448 5607289 Spro_0052 Serratia proteamaculans 568 hypothetical protein YP_001476290.1 52239 R 399741 CDS YP_001476291.1 157368302 5607290 complement(52549..53871) 1 NC_009832.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 53871 avtA 5607290 avtA Serratia proteamaculans 568 valine--pyruvate transaminase YP_001476291.1 52549 R 399741 CDS YP_001476292.1 157368303 5607291 complement(53931..55997) 1 NC_009832.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase 55997 malS 5607291 malS Serratia proteamaculans 568 periplasmic alpha-amylase YP_001476292.1 53931 R 399741 CDS YP_001476293.1 157368304 5604822 56186..56434 1 NC_009832.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: eca:ECA2757 hypothetical protein; CopG family transcriptional regulator 56434 5604822 Spro_0055 Serratia proteamaculans 568 CopG family transcriptional regulator YP_001476293.1 56186 D 399741 CDS YP_001476294.1 157368305 5604823 56424..56711 1 NC_009832.1 PFAM: plasmid stabilization system; KEGG: eca:ECA2758 hypothetical protein; plasmid stabilization system protein 56711 5604823 Spro_0056 Serratia proteamaculans 568 plasmid stabilization system protein YP_001476294.1 56424 D 399741 CDS YP_001476295.1 157368306 5604824 complement(56756..57733) 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 57733 5604824 Spro_0057 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001476295.1 56756 R 399741 CDS YP_001476296.1 157368307 5604825 complement(57838..59106) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ent:Ent638_0168 major facilitator superfamily MFS_1; major facilitator transporter 59106 5604825 Spro_0058 Serratia proteamaculans 568 major facilitator transporter YP_001476296.1 57838 R 399741 CDS YP_001476297.1 157368308 5603550 complement(59204..60163) 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: kpn:KPN_03913 putative kinase; ribokinase-like domain-containing protein 60163 5603550 Spro_0059 Serratia proteamaculans 568 ribokinase-like domain-containing protein YP_001476297.1 59204 R 399741 CDS YP_001476298.1 157368309 5603551 complement(60170..60922) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_03912 putative sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 60922 5603551 Spro_0060 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001476298.1 60170 R 399741 CDS YP_001476299.1 157368310 5603552 complement(61106..62140) 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03911 putative transcriptional regulator; LacI family transcription regulator 62140 5603552 Spro_0061 Serratia proteamaculans 568 LacI family transcription regulator YP_001476299.1 61106 R 399741 CDS YP_001476300.1 157368311 5607270 complement(62260..62922) 1 NC_009832.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: yen:YE4156 putative lipoprotein; putative outer membrane lipoprotein 62922 5607270 Spro_0062 Serratia proteamaculans 568 putative outer membrane lipoprotein YP_001476300.1 62260 R 399741 CDS YP_001476301.1 157368312 5607271 complement(63191..63649) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA0081 putative GNAT-family acetyltransferase; hypothetical protein 63649 5607271 Spro_0063 Serratia proteamaculans 568 hypothetical protein YP_001476301.1 63191 R 399741 CDS YP_001476302.1 157368313 5607272 complement(63625..64188) 1 NC_009832.1 KEGG: yen:YE4152 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 64188 5607272 Spro_0064 Serratia proteamaculans 568 DNA-3-methyladenine glycosylase I YP_001476302.1 63625 R 399741 CDS YP_001476303.1 157368314 5607273 64387..66375 1 NC_009832.1 KEGG: spt:SPA2157 outer membrane esterase; TIGRFAM: outer membrane autotransporter barrel domain; PFAM: lipolytic protein G-D-S-L family; Autotransporter beta- domain protein; outer membrane autotransporter 66375 5607273 Spro_0065 Serratia proteamaculans 568 outer membrane autotransporter YP_001476303.1 64387 D 399741 CDS YP_001476304.1 157368315 5602839 67169..67915 1 NC_009832.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: yen:YE1026 LuxR-family transcriptional regulator; LuxR family transcriptional regulator 67915 5602839 Spro_0066 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476304.1 67169 D 399741 CDS YP_001476305.1 157368316 5602840 complement(67874..68548) 1 NC_009832.1 PFAM: autoinducer synthesis protein; KEGG: eca:ECA0105 N-acylhomoserine lactone synthesis protein; autoinducer synthesis protein 68548 5602840 Spro_0067 Serratia proteamaculans 568 autoinducer synthesis protein YP_001476305.1 67874 R 399741 CDS YP_001476306.1 157368317 5602841 complement(68897..70240) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb1_1939 major facilitator family transporter; major facilitator transporter 70240 5602841 Spro_0068 Serratia proteamaculans 568 major facilitator transporter YP_001476306.1 68897 R 399741 CDS YP_001476307.1 157368318 5607264 70502..71416 1 NC_009832.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 71416 glyQ 5607264 glyQ Serratia proteamaculans 568 glycyl-tRNA synthetase subunit alpha YP_001476307.1 70502 D 399741 CDS YP_001476308.1 157368319 5607265 71426..73495 1 NC_009832.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 73495 glyS 5607265 glyS Serratia proteamaculans 568 glycyl-tRNA synthetase subunit beta YP_001476308.1 71426 D 399741 CDS YP_001476309.1 157368320 5607266 73841..74560 1 NC_009832.1 KEGG: yen:YE4149 hypothetical protein; hypothetical protein 74560 5607266 Spro_0071 Serratia proteamaculans 568 hypothetical protein YP_001476309.1 73841 D 399741 CDS YP_001476310.1 157368321 5607267 75110..77029 1 NC_009832.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: yen:YE4148 PTS system, mannitol-specific IIABC component; PTS system mannitol-specific transporter subunit IIC 77029 5607267 Spro_0072 Serratia proteamaculans 568 PTS system mannitol-specific transporter subunit IIC YP_001476310.1 75110 D 399741 CDS YP_001476311.1 157368322 5606298 77088..78239 1 NC_009832.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE4147 mannitol-1-phosphate 5-dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 78239 5606298 Spro_0073 Serratia proteamaculans 568 mannitol-1-phosphate 5-dehydrogenase YP_001476311.1 77088 D 399741 CDS YP_001476312.1 157368323 5606299 78334..78885 1 NC_009832.1 Acts as a repressor of the mtlAD operon; mannitol repressor protein 78885 mtlR 5606299 mtlR Serratia proteamaculans 568 mannitol repressor protein YP_001476312.1 78334 D 399741 CDS YP_001476313.1 157368324 5606300 complement(78882..79490) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: yen:YE4145 putative inner membrane protein; lysine exporter protein LysE/YggA 79490 5606300 Spro_0075 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001476313.1 78882 R 399741 CDS YP_001476314.1 157368325 5606138 79630..81096 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE4144 putative transcriptional regulator; transcriptional regulator 81096 5606138 Spro_0076 Serratia proteamaculans 568 transcriptional regulator YP_001476314.1 79630 D 399741 CDS YP_001476315.1 157368326 5606139 81118..81531 1 NC_009832.1 KEGG: yen:YE4143 hypothetical protein; hypothetical protein 81531 5606139 Spro_0077 Serratia proteamaculans 568 hypothetical protein YP_001476315.1 81118 D 399741 CDS YP_001476316.1 157368327 5606140 complement(81566..82345) 1 NC_009832.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2883 hypothetical protein; type 11 methyltransferase 82345 5606140 Spro_0078 Serratia proteamaculans 568 type 11 methyltransferase YP_001476316.1 81566 R 399741 CDS YP_001476317.1 157368328 5606141 complement(82460..83131) 1 NC_009832.1 PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: yen:YE4140 hypothetical protein; hypothetical protein 83131 5606141 Spro_0079 Serratia proteamaculans 568 hypothetical protein YP_001476317.1 82460 R 399741 CDS YP_001476318.1 157368329 5603897 complement(83225..85153) 1 NC_009832.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE4139 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis sensory transducer 85153 5603897 Spro_0080 Serratia proteamaculans 568 methyl-accepting chemotaxis sensory transducer YP_001476318.1 83225 R 399741 CDS YP_001476319.1 157368330 5603898 complement(85281..85901) 1 NC_009832.1 SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 85901 5603898 Spro_0081 Serratia proteamaculans 568 superoxide dismutase YP_001476319.1 85281 R 399741 CDS YP_001476320.1 157368331 5603899 complement(86032..86868) 1 NC_009832.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 86868 5603899 Spro_0082 Serratia proteamaculans 568 formate dehydrogenase accessory protein YP_001476320.1 86032 R 399741 CDS YP_001476321.1 157368332 5607158 87013..87600 1 NC_009832.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: ypi:YpsIP31758_4119 aerobic formate dehydrogenase, alpha subunit, proteobacterial-type; molybdopterin oxidoreductase Fe4S4 region 87600 5607158 Spro_0083 Serratia proteamaculans 568 molybdopterin oxidoreductase Fe4S4 region YP_001476321.1 87013 D 399741 CDS YP_001476322.1 157368333 5607159 87649..90060 1 NC_009832.1 KEGG: yen:YE4135 formate dehydrogenase-o, major subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 90060 5607159 Spro_0084 Serratia proteamaculans 568 formate dehydrogenase subunit alpha YP_001476322.1 87649 D 399741 CDS YP_001476323.1 157368334 5607160 90073..90972 1 NC_009832.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: ypi:YpsIP31758_4118 putative aerobic formate dehydrogenase, iron-sulfur subunit; formate dehydrogenase subunit beta 90972 5607160 Spro_0085 Serratia proteamaculans 568 formate dehydrogenase subunit beta YP_001476323.1 90073 D 399741 CDS YP_001476324.1 157368335 5607161 90969..91604 1 NC_009832.1 cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 91604 5607161 Spro_0086 Serratia proteamaculans 568 formate dehydrogenase-O subunit gamma YP_001476324.1 90969 D 399741 CDS YP_001476325.1 157368336 5603723 91604..92533 1 NC_009832.1 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 92533 5603723 Spro_0087 Serratia proteamaculans 568 formate dehydrogenase accessory protein FdhE YP_001476325.1 91604 D 399741 CDS YP_001476326.1 157368337 5603724 92673..93320 1 NC_009832.1 KEGG: ypi:YpsIP31758_0230 putative lipoprotein; hypothetical protein 93320 5603724 Spro_0088 Serratia proteamaculans 568 hypothetical protein YP_001476326.1 92673 D 399741 CDS YP_001476327.1 157368338 5603725 93355..93960 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: ent:Ent638_0139 glutathione S-transferase, C-terminal domain; putative glutathione S-transferase 93960 5603725 Spro_0089 Serratia proteamaculans 568 putative glutathione S-transferase YP_001476327.1 93355 D 399741 CDS YP_001476328.1 157368339 5606985 94027..95418 1 NC_009832.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 95418 5606985 Spro_0090 Serratia proteamaculans 568 selenocysteine synthase YP_001476328.1 94027 D 399741 CDS YP_001476329.1 157368340 5606986 95415..97262 1 NC_009832.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: yen:YE4130 selenocysteinyl-tRNA-specific translation factor; selenocysteinyl-tRNA-specific translation factor 97262 5606986 Spro_0091 Serratia proteamaculans 568 selenocysteinyl-tRNA-specific translation factor YP_001476329.1 95415 D 399741 CDS YP_001476330.1 157368341 5606987 complement(97654..98901) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_4110 multidrug translocase MdfA; major facilitator transporter 98901 5606987 Spro_0092 Serratia proteamaculans 568 major facilitator transporter YP_001476330.1 97654 R 399741 CDS YP_001476331.1 157368342 5606988 99120..100112 1 NC_009832.1 KEGG: yen:YE4126 hypothetical protein; hypothetical protein 100112 5606988 Spro_0093 Serratia proteamaculans 568 hypothetical protein YP_001476331.1 99120 D 399741 CDS YP_001476332.1 157368343 5606982 complement(100107..101030) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: yen:YE4125 putative transcriptional regulator; AraC family transcriptional regulator 101030 5606982 Spro_0094 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476332.1 100107 R 399741 CDS YP_001476333.1 157368344 5606983 complement(101033..101584) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE4124 putative member of isochorismatase hydrolase family; isochorismatase hydrolase 101584 5606983 Spro_0095 Serratia proteamaculans 568 isochorismatase hydrolase YP_001476333.1 101033 R 399741 CDS YP_001476334.1 157368345 5606984 complement(101685..103079) 1 NC_009832.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; putative deaminase 103079 5606984 Spro_0096 Serratia proteamaculans 568 putative deaminase YP_001476334.1 101685 R 399741 CDS YP_001476335.1 157368346 5605675 complement(103226..104677) 1 NC_009832.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: yen:YE4123 xylulose kinase; xylulokinase 104677 5605675 Spro_0097 Serratia proteamaculans 568 xylulokinase YP_001476335.1 103226 R 399741 CDS YP_001476336.1 157368347 5605676 complement(104720..106039) 1 NC_009832.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 106039 5605676 Spro_0098 Serratia proteamaculans 568 xylose isomerase YP_001476336.1 104720 R 399741 CDS YP_001476337.1 157368348 5605677 106406..107401 1 NC_009832.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 107401 xylF 5605677 xylF Serratia proteamaculans 568 D-xylose transporter subunit XylF YP_001476337.1 106406 D 399741 CDS YP_001476338.1 157368349 5605678 107431..108972 1 NC_009832.1 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 108972 5605678 Spro_0100 Serratia proteamaculans 568 xylose transporter ATP-binding subunit YP_001476338.1 107431 D 399741 CDS YP_001476339.1 157368350 5604681 108950..110134 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: yen:YE4119 sugar transport system permease protein; monosaccharide-transporting ATPase 110134 5604681 Spro_0101 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001476339.1 108950 D 399741 CDS YP_001476340.1 157368351 5604682 110239..111417 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ypi:YpsIP31758_4098 xylose operon regulatory protein; AraC family transcriptional regulator 111417 5604682 Spro_0102 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476340.1 110239 D 399741 CDS YP_001476341.1 157368352 5604683 111485..112105 1 NC_009832.1 PFAM: DNA polymerase beta domain protein region; KEGG: lpp:plpp0094 hypothetical protein; DNA polymerase subunit beta 112105 5604683 Spro_0103 Serratia proteamaculans 568 DNA polymerase subunit beta YP_001476341.1 111485 D 399741 CDS YP_001476342.1 157368353 5605484 112056..112496 1 NC_009832.1 KEGG: lpp:plpp0093 hypothetical protein; hypothetical protein 112496 5605484 Spro_0104 Serratia proteamaculans 568 hypothetical protein YP_001476342.1 112056 D 399741 CDS YP_001476343.1 157368354 5605485 complement(112502..113356) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2742 probable transcriptional regulator; LysR family transcriptional regulator 113356 5605485 Spro_0105 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476343.1 112502 R 399741 CDS YP_001476344.1 157368355 5605486 113483..114682 1 NC_009832.1 MFS transporter family member induced in the presence of cyanate as part of a 3 gene operon; not essential; putative cyanate transporter 114682 cynX 5605486 cynX Serratia proteamaculans 568 putative cyanate transporter YP_001476344.1 113483 D 399741 CDS YP_001476345.1 157368356 5605487 114759..116105 1 NC_009832.1 KEGG: yps:YPTB3589 hypothetical protein; hypothetical protein 116105 5605487 Spro_0107 Serratia proteamaculans 568 hypothetical protein YP_001476345.1 114759 D 399741 CDS YP_001476346.1 157368357 5603187 116464..117633 1 NC_009832.1 PFAM: integrase family protein; KEGG: ypp:YPDSF_3775 phage integrase; integrase family protein 117633 5603187 Spro_0108 Serratia proteamaculans 568 integrase family protein YP_001476346.1 116464 D 399741 CDS YP_001476347.1 157368358 5606448 117630..119648 1 NC_009832.1 KEGG: fps:FP1554 hypothetical protein; hypothetical protein 119648 5606448 Spro_0109 Serratia proteamaculans 568 hypothetical protein YP_001476347.1 117630 D 399741 CDS YP_001476348.1 157368359 5606449 complement(120134..120886) 1 NC_009832.1 KEGG: sus:Acid_2422 hypothetical protein; hypothetical protein 120886 5606449 Spro_0110 Serratia proteamaculans 568 hypothetical protein YP_001476348.1 120134 R 399741 CDS YP_001476349.1 157368360 5602761 complement(120891..121997) 1 NC_009832.1 KEGG: sus:Acid_2423 hypothetical protein; hypothetical protein 121997 5602761 Spro_0111 Serratia proteamaculans 568 hypothetical protein YP_001476349.1 120891 R 399741 CDS YP_001476350.1 157368361 5602762 complement(122132..123586) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: syf:Synpcc7942_1725 regulatory protein GntR, HTH; transcriptional regulator 123586 5602762 Spro_0112 Serratia proteamaculans 568 transcriptional regulator YP_001476350.1 122132 R 399741 CDS YP_001476351.1 157368362 5602763 123861..124433 1 NC_009832.1 KEGG: sun:SUN_0924 acetyltransferase, GNAT family; acetyltransferase 124433 5602763 Spro_0113 Serratia proteamaculans 568 acetyltransferase YP_001476351.1 123861 D 399741 CDS YP_001476352.1 157368363 5602764 124594..124917 1 NC_009832.1 KEGG: ecs:ECs4463 hypothetical protein; hypothetical protein 124917 5602764 Spro_0114 Serratia proteamaculans 568 hypothetical protein YP_001476352.1 124594 D 399741 CDS YP_001476353.1 157368364 5606743 124923..126059 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_0138 secretion protein HlyD family protein; secretion protein HlyD family protein 126059 5606743 Spro_0115 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001476353.1 124923 D 399741 CDS YP_001476354.1 157368365 5606744 126205..126522 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: ypi:YpsIP31758_0720 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 126522 5606744 Spro_0116 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476354.1 126205 D 399741 CDS YP_001476355.1 157368366 5606745 complement(126588..127175) 1 NC_009832.1 KEGG: oan:Oant_1359 hypothetical protein; hypothetical protein 127175 5606745 Spro_0117 Serratia proteamaculans 568 hypothetical protein YP_001476355.1 126588 R 399741 CDS YP_001476356.1 157368367 5603776 127320..127556 1 NC_009832.1 KEGG: pat:Patl_3324 hypothetical protein; hypothetical protein 127556 5603776 Spro_0118 Serratia proteamaculans 568 hypothetical protein YP_001476356.1 127320 D 399741 CDS YP_001476357.1 157368368 5603777 complement(127593..128015) 1 NC_009832.1 PFAM: histidine triad (HIT) protein; KEGG: har:HEAR2858 conserved hypothetical protein; histidine triad (HIT) protein 128015 5603777 Spro_0119 Serratia proteamaculans 568 histidine triad (HIT) protein YP_001476357.1 127593 R 399741 CDS YP_001476358.1 157368369 5603029 complement(128119..129174) 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pol:Bpro_4573 transcriptional regulator, LacI family; LacI family transcription regulator 129174 5603029 Spro_0120 Serratia proteamaculans 568 LacI family transcription regulator YP_001476358.1 128119 R 399741 CDS YP_001476359.1 157368370 5603030 complement(129225..129986) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: csa:Csal_1758 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 129986 5603030 Spro_0121 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476359.1 129225 R 399741 CDS YP_001476360.1 157368371 5603031 complement(130011..131882) 1 NC_009832.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bte:BTH_II0984 TRAP transporter, DctM subunit subfamily, putative; TRAP dicarboxylate transporter subunit DctM 131882 5603031 Spro_0122 Serratia proteamaculans 568 TRAP dicarboxylate transporter subunit DctM YP_001476360.1 130011 R 399741 CDS YP_001476361.1 157368372 5606631 complement(131907..132920) 1 NC_009832.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bte:BTH_II0985 bacterial extracellular solute-binding protein, family 7 superfamily; TRAP dicarboxylate transporter subunit DctP 132920 5606631 Spro_0123 Serratia proteamaculans 568 TRAP dicarboxylate transporter subunit DctP YP_001476361.1 131907 R 399741 CDS YP_001476362.1 157368373 5606632 133243..134691 1 NC_009832.1 KEGG: yen:YE4092 hypothetical protein; hypothetical protein 134691 5606632 Spro_0124 Serratia proteamaculans 568 hypothetical protein YP_001476362.1 133243 D 399741 CDS YP_001476363.1 157368374 5606633 complement(134688..135437) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pfl:PFL_4587 TDP-glucose-4,6-dehydratase-related protein; NAD-dependent epimerase/dehydratase 135437 5606633 Spro_0125 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001476363.1 134688 R 399741 CDS YP_001476364.1 157368375 5605614 complement(135531..136394) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_7356 putative transcriptional regulator, LysR family; LysR family transcriptional regulator 136394 5605614 Spro_0126 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476364.1 135531 R 399741 CDS YP_001476365.1 157368376 5605615 136509..137267 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B2157 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 137267 5605615 Spro_0127 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476365.1 136509 D 399741 CDS YP_001476366.1 157368377 5605616 complement(137280..137879) 1 NC_009832.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: hch:HCH_02572 guanosine polyphosphate pyrophosphohydrolase/synthetases; metal dependent phosphohydrolase 137879 5605616 Spro_0128 Serratia proteamaculans 568 metal dependent phosphohydrolase YP_001476366.1 137280 R 399741 CDS YP_001476367.1 157368378 5602528 137991..138455 1 NC_009832.1 PFAM: regulatory protein MarR; KEGG: sgl:SG0020 transcriptional regulator; MarR family transcriptional regulator 138455 5602528 Spro_0129 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001476367.1 137991 D 399741 CDS YP_001476368.1 157368379 5602529 138612..139037 1 NC_009832.1 PFAM: OsmC family protein; KEGG: yen:YE4091 putative osmotic/stress related protein; OsmC family protein 139037 5602529 Spro_0130 Serratia proteamaculans 568 OsmC family protein YP_001476368.1 138612 D 399741 CDS YP_001476369.1 157368380 5602530 139262..140956 1 NC_009832.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 140956 5602530 Spro_0131 Serratia proteamaculans 568 phosphoethanolamine transferase YP_001476369.1 139262 D 399741 CDS YP_001476370.1 157368381 5606467 141077..141667 1 NC_009832.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: ypi:YpsIP31758_4080 transcriptional regulatory protein UhpA; two component LuxR family transcriptional regulator 141667 5606467 Spro_0132 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001476370.1 141077 D 399741 CDS YP_001476371.1 157368382 5606468 141667..143208 1 NC_009832.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; sensory histidine kinase UhpB 143208 5606468 Spro_0133 Serratia proteamaculans 568 sensory histidine kinase UhpB YP_001476371.1 141667 D 399741 CDS YP_001476372.1 157368383 5606469 143303..144634 1 NC_009832.1 membrane protein regulates uhpT expression; regulatory protein UhpC 144634 5606469 Spro_0134 Serratia proteamaculans 568 regulatory protein UhpC YP_001476372.1 143303 D 399741 CDS YP_001476373.1 157368384 5606450 complement(145151..145483) 1 NC_009832.1 KEGG: gur:Gura_0613 hypothetical protein; hypothetical protein 145483 5606450 Spro_0135 Serratia proteamaculans 568 hypothetical protein YP_001476373.1 145151 R 399741 CDS YP_001476374.1 157368385 5606407 complement(145495..145791) 1 NC_009832.1 KEGG: gme:Gmet_2969 hypothetical protein; hypothetical protein 145791 5606407 Spro_0136 Serratia proteamaculans 568 hypothetical protein YP_001476374.1 145495 R 399741 CDS YP_001476375.1 157368386 5606408 146170..147861 1 NC_009832.1 KEGG: sbl:Sbal_3083 chitinase; PFAM: glycoside hydrolase family 18; Chitinase A domain protein; SMART: PKD domain containing protein; chitinase II; chitinase 147861 5606408 Spro_0137 Serratia proteamaculans 568 chitinase YP_001476375.1 146170 D 399741 CDS YP_001476376.1 157368387 5606342 148465..150072 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE4083 periplasmic dipeptide transport protein; extracellular solute-binding protein 150072 5606342 Spro_0138 Serratia proteamaculans 568 extracellular solute-binding protein YP_001476376.1 148465 D 399741 CDS YP_001476377.1 157368388 5606343 150179..151234 1 NC_009832.1 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 151234 5606343 Spro_0139 Serratia proteamaculans 568 dipeptide transporter permease DppB YP_001476377.1 150179 D 399741 CDS YP_001476378.1 157368389 5606344 151246..152148 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4081 dipeptide transport system permease protein; dipeptide transporter 152148 5606344 Spro_0140 Serratia proteamaculans 568 dipeptide transporter YP_001476378.1 151246 D 399741 CDS YP_001476379.1 157368390 5605949 152163..153143 1 NC_009832.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 153143 dppD 5605949 dppD Serratia proteamaculans 568 dipeptide transporter ATP-binding subunit YP_001476379.1 152163 D 399741 CDS YP_001476380.1 157368391 5605950 153140..154129 1 NC_009832.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 154129 dppF 5605950 dppF Serratia proteamaculans 568 dipeptide transporter ATP-binding subunit YP_001476380.1 153140 D 399741 CDS YP_001476381.1 157368392 5605951 complement(154409..156061) 1 NC_009832.1 KEGG: yen:YE4078 putative inner membrane protein possibly involved in cellulose synthesis; hypothetical protein 156061 5605951 Spro_0143 Serratia proteamaculans 568 hypothetical protein YP_001476381.1 154409 R 399741 CDS YP_001476382.1 157368393 5602956 complement(156045..156257) 1 NC_009832.1 KEGG: eca:ECA4365 hypothetical protein; hypothetical protein 156257 5602956 Spro_0144 Serratia proteamaculans 568 hypothetical protein YP_001476382.1 156045 R 399741 CDS YP_001476383.1 157368394 5602957 complement(156247..157815) 1 NC_009832.1 KEGG: yen:YE4077 hypothetical protein; hypothetical protein 157815 5602957 Spro_0145 Serratia proteamaculans 568 hypothetical protein YP_001476383.1 156247 R 399741 CDS YP_001476384.1 157368395 5602958 158014..158205 1 NC_009832.1 KEGG: yen:YE4076 hypothetical protein; hypothetical protein 158205 5602958 Spro_0146 Serratia proteamaculans 568 hypothetical protein YP_001476384.1 158014 D 399741 CDS YP_001476385.1 157368396 5606261 158209..158946 1 NC_009832.1 PFAM: YhjQ family protein; KEGG: yen:YE4075 hypothetical protein; YhjQ family protein 158946 5606261 Spro_0147 Serratia proteamaculans 568 YhjQ family protein YP_001476385.1 158209 D 399741 CDS YP_001476386.1 157368397 5606262 158943..161546 1 NC_009832.1 polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; cellulose synthase catalytic subunit 161546 bcsA 5606262 bcsA Serratia proteamaculans 568 cellulose synthase catalytic subunit YP_001476386.1 158943 D 399741 CDS YP_001476387.1 157368398 5606263 161602..163911 1 NC_009832.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 163911 5606263 Spro_0149 Serratia proteamaculans 568 cellulose synthase regulator protein YP_001476387.1 161602 D 399741 CDS YP_001476388.1 157368399 5604991 163917..165029 1 NC_009832.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 165029 5604991 Spro_0150 Serratia proteamaculans 568 endo-1,4-D-glucanase YP_001476388.1 163917 D 399741 CDS YP_001476389.1 157368400 5604992 165011..168484 1 NC_009832.1 cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; cellulose synthase subunit BcsC 168484 5604992 Spro_0151 Serratia proteamaculans 568 cellulose synthase subunit BcsC YP_001476389.1 165011 D 399741 CDS YP_001476390.1 157368401 5604993 168775..170781 1 NC_009832.1 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a putative phosphodiesterase protein from E. coli; putative phosphodiesterase 170781 5604993 Spro_0152 Serratia proteamaculans 568 putative phosphodiesterase YP_001476390.1 168775 D 399741 CDS YP_001476391.1 157368402 5605098 171075..172364 1 NC_009832.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 172364 5605098 Spro_0153 Serratia proteamaculans 568 C4-dicarboxylate transporter DctA YP_001476391.1 171075 D 399741 CDS YP_001476392.1 157368403 5605099 172647..174140 1 NC_009832.1 PFAM: peptidase M16 domain protein; KEGG: yen:YE4066 putative insulinase family protease; peptidase M16 domain-containing protein 174140 5605099 Spro_0154 Serratia proteamaculans 568 peptidase M16 domain-containing protein YP_001476392.1 172647 D 399741 CDS YP_001476393.1 157368404 5605154 complement(174168..174503) 1 NC_009832.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: kpn:KPN_04275 peptidyl-prolyl cis-trans isomerase C (rotamase C); PpiC-type peptidyl-prolyl cis-trans isomerase 174503 5605154 Spro_0155 Serratia proteamaculans 568 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001476393.1 174168 R 399741 CDS YP_001476394.1 157368405 5605155 174559..176583 1 NC_009832.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 176583 5605155 Spro_0156 Serratia proteamaculans 568 ATP-dependent DNA helicase Rep YP_001476394.1 174559 D 399741 CDS YP_001476395.1 157368406 5605156 complement(176766..178262) 1 NC_009832.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 178262 5605156 Spro_0157 Serratia proteamaculans 568 guanosine pentaphosphate phosphohydrolase YP_001476395.1 176766 R 399741 CDS YP_001476396.1 157368407 5605160 complement(178269..179555) 1 NC_009832.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 179555 5605160 Spro_0158 Serratia proteamaculans 568 ATP-dependent RNA helicase RhlB YP_001476396.1 178269 R 399741 CDS YP_001476397.1 157368408 5605161 179673..179999 1 NC_009832.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sdy:SDY_3968 thioredoxin 1; thioredoxin 179999 5605161 Spro_0159 Serratia proteamaculans 568 thioredoxin YP_001476397.1 179673 D 399741 CDS YP_001476398.1 157368409 5605162 180578..181837 1 NC_009832.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 181837 rho 5605162 rho Serratia proteamaculans 568 transcription termination factor Rho YP_001476398.1 180578 D 399741 CDS YP_001476399.1 157368410 5605187 182166..183248 1 NC_009832.1 TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: ypi:YpsIP31758_0182 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 183248 5605187 Spro_0161 Serratia proteamaculans 568 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_001476399.1 182166 D 399741 CDS YP_001476400.1 157368411 5605188 183269..184321 1 NC_009832.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 184321 5605188 Spro_0162 Serratia proteamaculans 568 lipopolysaccharide biosynthesis protein WzzE YP_001476400.1 183269 D 399741 CDS YP_001476401.1 157368412 5605189 184406..185536 1 NC_009832.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: yen:YE0171 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 185536 5605189 Spro_0163 Serratia proteamaculans 568 UDP-N-acetylglucosamine 2-epimerase YP_001476401.1 184406 D 399741 CDS YP_001476402.1 157368413 5605232 185533..186795 1 NC_009832.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 186795 wecC 5605232 wecC Serratia proteamaculans 568 UDP-N-acetyl-D-mannosamine dehydrogenase YP_001476402.1 185533 D 399741 CDS YP_001476403.1 157368414 5605233 186792..187859 1 NC_009832.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ypi:YpsIP31758_0186 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 187859 5605233 Spro_0165 Serratia proteamaculans 568 dTDP-glucose 4,6-dehydratase YP_001476403.1 186792 D 399741 CDS YP_001476404.1 157368415 5605234 187911..188792 1 NC_009832.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ypi:YpsIP31758_0187 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 188792 5605234 Spro_0166 Serratia proteamaculans 568 glucose-1-phosphate thymidylyltransferase YP_001476404.1 187911 D 399741 CDS YP_001476405.1 157368416 5605287 188770..189501 1 NC_009832.1 TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ypi:YpsIP31758_0188 TDP-D-fucosamine acetyltransferase; TDP-fucosamine acetyltransferase 189501 5605287 Spro_0167 Serratia proteamaculans 568 TDP-fucosamine acetyltransferase YP_001476405.1 188770 D 399741 CDS YP_001476406.1 157368417 5605288 189488..190618 1 NC_009832.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 190618 5605288 Spro_0168 Serratia proteamaculans 568 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_001476406.1 189488 D 399741 CDS YP_001476407.1 157368418 5605301 190620..191870 1 NC_009832.1 PFAM: polysaccharide biosynthesis protein; KEGG: yen:YE0177 putative lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein 191870 5605301 Spro_0169 Serratia proteamaculans 568 polysaccharide biosynthesis protein YP_001476407.1 190620 D 399741 CDS YP_001476408.1 157368419 5605302 191867..192952 1 NC_009832.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 192952 5605302 Spro_0170 Serratia proteamaculans 568 4-alpha-L-fucosyltransferase YP_001476408.1 191867 D 399741 CDS YP_001476409.1 157368420 5605303 192949..194325 1 NC_009832.1 enterobacterial common antigen polymerase; putative common antigen polymerase 194325 5605303 Spro_0171 Serratia proteamaculans 568 putative common antigen polymerase YP_001476409.1 192949 D 399741 CDS YP_001476410.1 157368421 5605354 194339..195079 1 NC_009832.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ypi:YpsIP31758_0193 glycosyl transferase, WecB/TagA/CpsF family; putative UDP-N-acetyl-D-mannosaminuronic acid transferase 195079 5605354 Spro_0172 Serratia proteamaculans 568 putative UDP-N-acetyl-D-mannosaminuronic acid transferase YP_001476410.1 194339 D 399741 CDS YP_001476411.1 157368422 5605355 195448..196851 1 NC_009832.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; putative transport protein YifK 196851 5605355 Spro_0173 Serratia proteamaculans 568 putative transport protein YifK YP_001476411.1 195448 D 399741 CDS YP_001476412.1 157368423 5605454 complement(197585..197827) 1 NC_009832.1 hypothetical protein 197827 5605454 Spro_0174 Serratia proteamaculans 568 hypothetical protein YP_001476412.1 197585 R 399741 CDS YP_001476413.1 157368424 5605363 complement(198310..199506) 1 NC_009832.1 TIGRFAM: HemY protein; PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: yen:YE0184 putative protoheme IX biogenesis protein; putative protoheme IX biogenesis protein 199506 5605363 Spro_0175 Serratia proteamaculans 568 putative protoheme IX biogenesis protein YP_001476413.1 198310 R 399741 CDS YP_001476414.1 157368425 5605364 complement(199510..200634) 1 NC_009832.1 PFAM: protein of unknown function DUF513 hemX; KEGG: yen:YE0185 putative uroporphyrin-III C-methyltransferase; putative uroporphyrinogen III C-methyltransferase 200634 5605364 Spro_0176 Serratia proteamaculans 568 putative uroporphyrinogen III C-methyltransferase YP_001476414.1 199510 R 399741 CDS YP_001476415.1 157368426 5605365 complement(200658..201398) 1 NC_009832.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 201398 hemD 5605365 hemD Serratia proteamaculans 568 uroporphyrinogen-III synthase YP_001476415.1 200658 R 399741 CDS YP_001476416.1 157368427 5605368 complement(201395..202336) 1 NC_009832.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 202336 hemC 5605368 hemC Serratia proteamaculans 568 porphobilinogen deaminase YP_001476416.1 201395 R 399741 CDS YP_001476417.1 157368428 5605369 202653..205205 1 NC_009832.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 205205 cyaA 5605369 cyaA Serratia proteamaculans 568 adenylate cyclase YP_001476417.1 202653 D 399741 CDS YP_001476418.1 157368429 5605409 complement(205252..205572) 1 NC_009832.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 205572 cyaY 5605409 cyaY Serratia proteamaculans 568 frataxin-like protein YP_001476418.1 205252 R 399741 CDS YP_001476419.1 157368430 5605410 205645..205857 1 NC_009832.1 KEGG: ypp:YPDSF_3463 lipoprotein; lipoprotein 205857 5605410 Spro_0181 Serratia proteamaculans 568 lipoprotein YP_001476419.1 205645 D 399741 CDS YP_001476420.1 157368431 5605411 205915..206739 1 NC_009832.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 206739 dapF 5605411 dapF Serratia proteamaculans 568 diaminopimelate epimerase YP_001476420.1 205915 D 399741 CDS YP_001476421.1 157368432 5605441 206736..207440 1 NC_009832.1 PFAM: protein of unknown function DUF484; KEGG: ypi:YpsIP31758_0206 hypothetical protein; hypothetical protein 207440 5605441 Spro_0183 Serratia proteamaculans 568 hypothetical protein YP_001476421.1 206736 D 399741 CDS YP_001476422.1 157368433 5605442 207437..208348 1 NC_009832.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 208348 xerC 5605442 xerC Serratia proteamaculans 568 site-specific tyrosine recombinase XerC YP_001476422.1 207437 D 399741 CDS YP_001476423.1 157368434 5605443 208348..209064 1 NC_009832.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 209064 5605443 Spro_0185 Serratia proteamaculans 568 flavin mononucleotide phosphatase YP_001476423.1 208348 D 399741 CDS YP_001476424.1 157368435 5605447 209133..211304 1 NC_009832.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 211304 uvrD 5605447 uvrD Serratia proteamaculans 568 DNA-dependent helicase II YP_001476424.1 209133 D 399741 CDS YP_001476425.1 157368436 5605448 complement(211347..211826) 1 NC_009832.1 KEGG: kpn:KPN_02730 hypothetical protein; hypothetical protein 211826 5605448 Spro_0187 Serratia proteamaculans 568 hypothetical protein YP_001476425.1 211347 R 399741 CDS YP_001476426.1 157368437 5605449 212272..213222 1 NC_009832.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 213222 5605449 Spro_0188 Serratia proteamaculans 568 magnesium/nickel/cobalt transporter CorA YP_001476426.1 212272 D 399741 CDS YP_001476427.1 157368438 5605572 213334..214392 1 NC_009832.1 PFAM: putative ammonia monooxygenase; KEGG: eca:ECA4176 putative membrane protein; putative ammonia monooxygenase 214392 5605572 Spro_0189 Serratia proteamaculans 568 putative ammonia monooxygenase YP_001476427.1 213334 D 399741 CDS YP_001476428.1 157368439 5605573 complement(214401..215288) 1 NC_009832.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_0215 RarD protein; transporter DMT superfamily protein 215288 5605573 Spro_0190 Serratia proteamaculans 568 transporter DMT superfamily protein YP_001476428.1 214401 R 399741 CDS YP_001476429.1 157368440 5605574 complement(215353..215823) 1 NC_009832.1 PFAM: thioesterase superfamily protein; KEGG: ypi:YpsIP31758_0216 thioesterase family protein; hypothetical protein 215823 5605574 Spro_0191 Serratia proteamaculans 568 hypothetical protein YP_001476429.1 215353 R 399741 CDS YP_001476430.1 157368441 5605584 216024..216902 1 NC_009832.1 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 216902 5605584 Spro_0192 Serratia proteamaculans 568 phospholipase A YP_001476430.1 216024 D 399741 CDS YP_001476431.1 157368442 5605585 216939..218783 1 NC_009832.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 218783 5605585 Spro_0193 Serratia proteamaculans 568 ATP-dependent DNA helicase RecQ YP_001476431.1 216939 D 399741 CDS YP_001476432.1 157368443 5605622 218796..219422 1 NC_009832.1 TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: yen:YE0205 threonine efflux protein; threonine efflux system 219422 5605622 Spro_0194 Serratia proteamaculans 568 threonine efflux system YP_001476432.1 218796 D 399741 CDS YP_001476433.1 157368444 5605623 complement(219475..220095) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4170 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein 220095 rhtB 5605623 rhtB Serratia proteamaculans 568 homoserine/homoserine lactone efflux protein YP_001476433.1 219475 R 399741 CDS YP_001476434.1 157368445 5605624 220238..221275 1 NC_009832.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 221275 5605624 Spro_0196 Serratia proteamaculans 568 lysophospholipase L2 YP_001476434.1 220238 D 399741 CDS YP_001476435.1 157368446 5605634 221287..222087 1 NC_009832.1 purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; putative sugar phosphatase 222087 5605634 Spro_0197 Serratia proteamaculans 568 putative sugar phosphatase YP_001476435.1 221287 D 399741 CDS YP_001476436.1 157368447 5605635 complement(222123..223202) 1 NC_009832.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 223202 glpQ 5605635 glpQ Serratia proteamaculans 568 glycerophosphodiester phosphodiesterase YP_001476436.1 222123 R 399741 CDS YP_001476437.1 157368448 5605636 complement(223278..224633) 1 NC_009832.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 224633 glpT 5605636 glpT Serratia proteamaculans 568 sn-glycerol-3-phosphate transporter YP_001476437.1 223278 R 399741 CDS YP_001476438.1 157368449 5605657 224999..226642 1 NC_009832.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 226642 glpA 5605657 glpA Serratia proteamaculans 568 sn-glycerol-3-phosphate dehydrogenase subunit A YP_001476438.1 224999 D 399741 CDS YP_001476439.1 157368450 5605658 226629..227903 1 NC_009832.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 227903 5605658 Spro_0201 Serratia proteamaculans 568 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_001476439.1 226629 D 399741 CDS YP_001476440.1 157368451 5605659 227900..229099 1 NC_009832.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 229099 glpC 5605659 glpC Serratia proteamaculans 568 sn-glycerol-3-phosphate dehydrogenase subunit C YP_001476440.1 227900 D 399741 CDS YP_001476441.1 157368452 5605662 complement(229135..229698) 1 NC_009832.1 KEGG: eca:ECA4355 putative lipoprotein; hypothetical protein 229698 5605662 Spro_0203 Serratia proteamaculans 568 hypothetical protein YP_001476441.1 229135 R 399741 CDS YP_001476442.1 157368453 5605663 complement(229834..230499) 1 NC_009832.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: yen:YE0216 hypothetical protein; hypothetical protein 230499 5605663 Spro_0204 Serratia proteamaculans 568 hypothetical protein YP_001476442.1 229834 R 399741 CDS YP_001476443.1 157368454 5605775 230845..231090 1 NC_009832.1 PFAM: SirA family protein; KEGG: ypi:YpsIP31758_0232 sulfurtransferase TusA; SirA family protein 231090 5605775 Spro_0205 Serratia proteamaculans 568 SirA family protein YP_001476443.1 230845 D 399741 CDS YP_001476444.1 157368455 5605776 complement(231066..232232) 1 NC_009832.1 KEGG: plu:plu0508 hypothetical protein; hypothetical protein 232232 5605776 Spro_0206 Serratia proteamaculans 568 hypothetical protein YP_001476444.1 231066 R 399741 CDS YP_001476445.1 157368456 5605777 complement(232232..233368) 1 NC_009832.1 KEGG: plu:plu0509 hypothetical protein; hypothetical protein 233368 5605777 Spro_0207 Serratia proteamaculans 568 hypothetical protein YP_001476445.1 232232 R 399741 CDS YP_001476446.1 157368457 5605821 complement(233368..234438) 1 NC_009832.1 KEGG: stt:t3689 hypothetical protein; hypothetical protein 234438 5605821 Spro_0208 Serratia proteamaculans 568 hypothetical protein YP_001476446.1 233368 R 399741 CDS YP_001476447.1 157368458 5605822 complement(234592..236907) 1 NC_009832.1 P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase 236907 zntA 5605822 zntA Serratia proteamaculans 568 zinc/cadmium/mercury/lead-transporting ATPase YP_001476447.1 234592 R 399741 CDS YP_001476448.1 157368459 5605823 237472..238986 1 NC_009832.1 KEGG: eca:ECA2785 metalloprotease; PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; Peptidase M10 serralysin; SMART: peptidase metallopeptidase; serralysin 238986 5605823 Spro_0210 Serratia proteamaculans 568 serralysin YP_001476448.1 237472 D 399741 CDS YP_001476449.1 157368460 5605866 239102..239416 1 NC_009832.1 PFAM: metalloprotease inhibitor I38; KEGG: pap:PSPA7_4142 alkaline proteinase inhibitor AprI; metalloprotease inhibitor I38 239416 5605866 Spro_0211 Serratia proteamaculans 568 metalloprotease inhibitor I38 YP_001476449.1 239102 D 399741 CDS YP_001476450.1 157368461 5605867 complement(239454..240080) 1 NC_009832.1 PFAM: YhhN family protein; KEGG: yen:YE0219 hypothetical protein; YhhN family protein 240080 5605867 Spro_0212 Serratia proteamaculans 568 YhhN family protein YP_001476450.1 239454 R 399741 CDS YP_001476451.1 157368462 5605868 complement(240272..241024) 1 NC_009832.1 PFAM: regulatory protein LuxR; LuxR family transcriptional regulator 241024 5605868 Spro_0213 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476451.1 240272 R 399741 CDS YP_001476452.1 157368463 5605955 complement(241085..242242) 1 NC_009832.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: stt:t2547 putative fimbrail protein; CblD family pilus biogenesis initiator protein 242242 5605955 Spro_0214 Serratia proteamaculans 568 CblD family pilus biogenesis initiator protein YP_001476452.1 241085 R 399741 CDS YP_001476453.1 157368464 5605956 complement(242263..244890) 1 NC_009832.1 KEGG: spt:SPA2453 outermembrane fimbrial usher protein; outermembrane fimbrial usher protein 244890 5605956 Spro_0215 Serratia proteamaculans 568 outermembrane fimbrial usher protein YP_001476453.1 242263 R 399741 CDS YP_001476454.1 157368465 5605957 complement(244975..245508) 1 NC_009832.1 PFAM: CS1 type fimbrial major subunit; KEGG: sec:SC0301 putative fimbrial subunit; CS1 type fimbrial major subunit 245508 5605957 Spro_0216 Serratia proteamaculans 568 CS1 type fimbrial major subunit YP_001476454.1 244975 R 399741 CDS YP_001476455.1 157368466 5606022 complement(245518..246252) 1 NC_009832.1 KEGG: stt:t2550 putative fimbrial protein; putative fimbrial protein 246252 5606022 Spro_0217 Serratia proteamaculans 568 putative fimbrial protein YP_001476455.1 245518 R 399741 CDS YP_001476456.1 157368467 5606023 complement(246627..247202) 1 NC_009832.1 PFAM: integrase family protein; KEGG: stm:STM0716 putative phage integrase; integrase family protein 247202 5606023 Spro_0218 Serratia proteamaculans 568 integrase family protein YP_001476456.1 246627 R 399741 CDS YP_001476457.1 157368468 5606077 complement(247450..247722) 1 NC_009832.1 PFAM: protein of unknown function DUF1145; KEGG: yen:YE0223 hypothetical protein; hypothetical protein 247722 5606077 Spro_0219 Serratia proteamaculans 568 hypothetical protein YP_001476457.1 247450 R 399741 CDS YP_001476458.1 157368469 5606078 complement(247712..248332) 1 NC_009832.1 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 248332 rsmD 5606078 rsmD Serratia proteamaculans 568 16S rRNA m(2)G966-methyltransferase YP_001476458.1 247712 R 399741 CDS YP_001476459.1 157368470 5606079 248556..250163 1 NC_009832.1 KEGG: yen:YE0225 cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 250163 5606079 Spro_0221 Serratia proteamaculans 568 signal recognition particle-docking protein FtsY YP_001476459.1 248556 D 399741 CDS YP_001476460.1 157368471 5606109 250169..250840 1 NC_009832.1 putative ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 250840 5606109 Spro_0222 Serratia proteamaculans 568 cell division protein FtsE YP_001476460.1 250169 D 399741 CDS YP_001476461.1 157368472 5606110 250830..251783 1 NC_009832.1 putative ABC transporter, membrane protein; cell division protein FtsX 251783 ftsX 5606110 ftsX Serratia proteamaculans 568 cell division protein FtsX YP_001476461.1 250830 D 399741 CDS YP_001476462.1 157368473 5606111 252100..252957 1 NC_009832.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 252957 5606111 Spro_0224 Serratia proteamaculans 568 RNA polymerase factor sigma-32 YP_001476462.1 252100 D 399741 CDS YP_001476463.1 157368474 5606213 complement(253017..255074) 1 NC_009832.1 KEGG: pen:PSEEN2727 hypothetical protein; hypothetical protein 255074 5606213 Spro_0225 Serratia proteamaculans 568 hypothetical protein YP_001476463.1 253017 R 399741 CDS YP_001476464.1 157368475 5606214 complement(255061..256278) 1 NC_009832.1 KEGG: pen:PSEEN2726 hypothetical protein; hypothetical protein 256278 5606214 Spro_0226 Serratia proteamaculans 568 hypothetical protein YP_001476464.1 255061 R 399741 CDS YP_001476465.1 157368476 5606215 complement(256275..256667) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yps:YPTB0225 putative acetyltransferase; GCN5-like N-acetyltransferase 256667 5606215 Spro_0227 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001476465.1 256275 R 399741 CDS YP_001476466.1 157368477 5606222 257074..258189 1 NC_009832.1 PFAM: Extracellular ligand-binding receptor; KEGG: yen:YE0230 branched-chain amino acid-binding protein; extracellular ligand-binding receptor 258189 5606222 Spro_0228 Serratia proteamaculans 568 extracellular ligand-binding receptor YP_001476466.1 257074 D 399741 CDS YP_001476467.1 157368478 5606223 258306..259232 1 NC_009832.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease LivH 259232 5606223 Spro_0229 Serratia proteamaculans 568 branched-chain amino acid transporter permease LivH YP_001476467.1 258306 D 399741 CDS YP_001476468.1 157368479 5606336 259229..260512 1 NC_009832.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease 260512 livM 5606336 livM Serratia proteamaculans 568 leucine/isoleucine/valine transporter permease YP_001476468.1 259229 D 399741 CDS YP_001476469.1 157368480 5606337 260509..261276 1 NC_009832.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 261276 livG 5606337 livG Serratia proteamaculans 568 leucine/isoleucine/valine transporter ATP-binding subunit YP_001476469.1 260509 D 399741 CDS YP_001476470.1 157368481 5606338 261280..261981 1 NC_009832.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 261981 livF 5606338 livF Serratia proteamaculans 568 leucine/isoleucine/valine transporter ATP-binding subunit YP_001476470.1 261280 D 399741 CDS YP_001476471.1 157368482 5606421 262024..263211 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: eca:ECA4336 putative aminotransferase; GntR family transcriptional regulator 263211 5606421 Spro_0233 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001476471.1 262024 D 399741 CDS YP_001476472.1 157368483 5606422 263403..264722 1 NC_009832.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 264722 5606422 Spro_0234 Serratia proteamaculans 568 glycerol-3-phosphate transporter periplasmic binding protein YP_001476472.1 263403 D 399741 CDS YP_001476473.1 157368484 5606423 264837..265724 1 NC_009832.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 265724 5606423 Spro_0235 Serratia proteamaculans 568 glycerol-3-phosphate transporter permease YP_001476473.1 264837 D 399741 CDS YP_001476474.1 157368485 5606433 265721..266566 1 NC_009832.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 266566 5606433 Spro_0236 Serratia proteamaculans 568 glycerol-3-phosphate transporter membrane protein YP_001476474.1 265721 D 399741 CDS YP_001476475.1 157368486 5606434 266571..267644 1 NC_009832.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 267644 ugpC 5606434 ugpC Serratia proteamaculans 568 glycerol-3-phosphate transporter ATP-binding subunit YP_001476475.1 266571 D 399741 CDS YP_001476476.1 157368487 5606435 267641..268390 1 NC_009832.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; cytoplasmic glycerophosphodiester phosphodiesterase 268390 ugpQ 5606435 ugpQ Serratia proteamaculans 568 cytoplasmic glycerophosphodiester phosphodiesterase YP_001476476.1 267641 D 399741 CDS YP_001476477.1 157368488 5606444 complement(268387..268716) 1 NC_009832.1 hypothetical protein 268716 5606444 Spro_0239 Serratia proteamaculans 568 hypothetical protein YP_001476477.1 268387 R 399741 CDS YP_001476478.1 157368489 5606445 268869..269732 1 NC_009832.1 TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypp:YPDSF_3407 membrane protein; carboxylate/amino acid/amine transporter 269732 5606445 Spro_0240 Serratia proteamaculans 568 carboxylate/amino acid/amine transporter YP_001476478.1 268869 D 399741 CDS YP_001476479.1 157368490 5606446 complement(269766..270716) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0262 transcriptional regulator MetR; LysR family transcriptional regulator 270716 5606446 Spro_0241 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476479.1 269766 R 399741 CDS YP_001476480.1 157368491 5606482 270822..273098 1 NC_009832.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 273098 5606482 Spro_0242 Serratia proteamaculans 568 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_001476480.1 270822 D 399741 CDS YP_001476481.1 157368492 5606483 complement(273203..274039) 1 NC_009832.1 PFAM: dienelactone hydrolase; KEGG: ypi:YpsIP31758_0265 dienelactone hydrolase family protein; carboxymethylenebutenolidase 274039 5606483 Spro_0243 Serratia proteamaculans 568 carboxymethylenebutenolidase YP_001476481.1 273203 R 399741 CDS YP_001476482.1 157368493 5606544 274546..275307 1 NC_009832.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 275307 5606544 Spro_0244 Serratia proteamaculans 568 uridine phosphorylase YP_001476482.1 274546 D 399741 CDS YP_001476483.1 157368494 5606545 275478..276260 1 NC_009832.1 KEGG: yen:YE0252 hypothetical protein; protein tyrosine/serine phosphatase 276260 5606545 Spro_0245 Serratia proteamaculans 568 protein tyrosine/serine phosphatase YP_001476483.1 275478 D 399741 CDS YP_001476484.1 157368495 5606546 276348..276878 1 NC_009832.1 KEGG: ypi:YpsIP31758_0269 DedA family protein; DedA family protein 276878 5606546 Spro_0246 Serratia proteamaculans 568 DedA family protein YP_001476484.1 276348 D 399741 CDS YP_001476485.1 157368496 5606557 277019..278566 1 NC_009832.1 PFAM: protein of unknown function DUF195; KEGG: ypi:YpsIP31758_0270 RmuC domain protein; hypothetical protein 278566 5606557 Spro_0247 Serratia proteamaculans 568 hypothetical protein YP_001476485.1 277019 D 399741 CDS YP_001476486.1 157368497 5606558 278646..279401 1 NC_009832.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 279401 ubiE 5606558 ubiE Serratia proteamaculans 568 ubiquinone/menaquinone biosynthesis methyltransferase YP_001476486.1 278646 D 399741 CDS YP_001476487.1 157368498 5606559 279403..280023 1 NC_009832.1 PFAM: Sterol-binding domain protein; KEGG: yen:YE0257 hypothetical protein; sterol-binding domain-containing protein 280023 5606559 Spro_0249 Serratia proteamaculans 568 sterol-binding domain-containing protein YP_001476487.1 279403 D 399741 CDS YP_001476488.1 157368499 5606593 280020..281651 1 NC_009832.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; putative ubiquinone biosynthesis protein UbiB 281651 ubiB 5606593 ubiB Serratia proteamaculans 568 putative ubiquinone biosynthesis protein UbiB YP_001476488.1 280020 D 399741 CDS YP_001476489.1 157368500 5606594 281732..281995 1 NC_009832.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: plu:plu4410 sec-independent protein translocase protein; twin arginine-targeting protein translocase 281995 5606594 Spro_0251 Serratia proteamaculans 568 twin arginine-targeting protein translocase YP_001476489.1 281732 D 399741 CDS YP_001476490.1 157368501 5606595 281999..282565 1 NC_009832.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: yps:YPTB0259 sec-independent protein translocase protein TatB; twin-arginine translocation protein, TatB subunit 282565 5606595 Spro_0252 Serratia proteamaculans 568 twin-arginine translocation protein, TatB subunit YP_001476490.1 281999 D 399741 CDS YP_001476491.1 157368502 5606602 282569..283339 1 NC_009832.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 283339 5606602 Spro_0253 Serratia proteamaculans 568 twin-arginine protein translocation system subunit TatC YP_001476491.1 282569 D 399741 CDS YP_001476492.1 157368503 5606603 283392..284174 1 NC_009832.1 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 284174 5606603 Spro_0254 Serratia proteamaculans 568 DNase TatD YP_001476492.1 283392 D 399741 CDS YP_001476493.1 157368504 5606604 284189..285211 1 NC_009832.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 285211 5606604 Spro_0255 Serratia proteamaculans 568 delta-aminolevulinic acid dehydratase YP_001476493.1 284189 D 399741 CDS YP_001476494.1 157368505 5606605 complement(285258..285746) 1 NC_009832.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: eca:ECA0204 transcriptional activator; transcriptional activator RfaH 285746 rfaH 5606605 rfaH Serratia proteamaculans 568 transcriptional activator RfaH YP_001476494.1 285258 R 399741 CDS YP_001476495.1 157368506 5606606 285991..286716 1 NC_009832.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 286716 5606606 Spro_0257 Serratia proteamaculans 568 peptidase E YP_001476495.1 285991 D 399741 CDS YP_001476496.1 157368507 5606610 286781..288301 1 NC_009832.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate decarboxylase 288301 5606610 Spro_0258 Serratia proteamaculans 568 3-octaprenyl-4-hydroxybenzoate decarboxylase YP_001476496.1 286781 D 399741 CDS YP_001476497.1 157368508 5606611 288352..289053 1 NC_009832.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 289053 fre 5606611 fre Serratia proteamaculans 568 FMN reductase YP_001476497.1 288352 D 399741 CDS YP_001476498.1 157368509 5606612 complement(289224..290387) 1 NC_009832.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 290387 fadA 5606612 fadA Serratia proteamaculans 568 3-ketoacyl-CoA thiolase YP_001476498.1 289224 R 399741 CDS YP_001476499.1 157368510 5606613 complement(290398..292587) 1 NC_009832.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 292587 fadB 5606613 fadB Serratia proteamaculans 568 multifunctional fatty acid oxidation complex subunit alpha YP_001476499.1 290398 R 399741 CDS YP_001476500.1 157368511 5606614 292821..294017 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: aha:AHA_1632 probable MFS transporter; major facilitator transporter 294017 5606614 Spro_0262 Serratia proteamaculans 568 major facilitator transporter YP_001476500.1 292821 D 399741 CDS YP_001476501.1 157368512 5606615 294135..295466 1 NC_009832.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 295466 5606615 Spro_0263 Serratia proteamaculans 568 proline dipeptidase YP_001476501.1 294135 D 399741 CDS YP_001476502.1 157368513 5606697 295466..296080 1 NC_009832.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: ypi:YpsIP31758_0285 hypothetical protein; hypothetical protein 296080 5606697 Spro_0264 Serratia proteamaculans 568 hypothetical protein YP_001476502.1 295466 D 399741 CDS YP_001476503.1 157368514 5606698 296115..297566 1 NC_009832.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: yps:YPTB0270 Trk system potassium uptake protein TrkH; potassium transporter 297566 5606698 Spro_0265 Serratia proteamaculans 568 potassium transporter YP_001476503.1 296115 D 399741 CDS YP_001476504.1 157368515 5606699 297589..298122 1 NC_009832.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 298122 hemG 5606699 hemG Serratia proteamaculans 568 protoporphyrinogen oxidase YP_001476504.1 297589 D 399741 CDS YP_001476505.1 157368516 5603409 304136..305173 1 NC_009832.1 KEGG: eca:ECA0213 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 305173 5603409 Spro_0267 Serratia proteamaculans 568 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001476505.1 304136 D 399741 CDS YP_001476506.1 157368517 5606782 305170..306132 1 NC_009832.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 306132 5606782 Spro_0268 Serratia proteamaculans 568 biotin--protein ligase YP_001476506.1 305170 D 399741 CDS YP_001476507.1 157368518 5606919 complement(306179..307129) 1 NC_009832.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 307129 5606919 Spro_0269 Serratia proteamaculans 568 pantothenate kinase YP_001476507.1 306179 R 399741 CDS YP_001476508.1 157368519 5606033 308218..309402 1 NC_009832.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 309402 5606033 Spro_0270 Serratia proteamaculans 568 elongation factor Tu YP_001476508.1 308218 D 399741 CDS YP_001476509.1 157368520 5606921 309660..310043 1 NC_009832.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 310043 secE 5606921 secE Serratia proteamaculans 568 preprotein translocase subunit SecE YP_001476509.1 309660 D 399741 CDS YP_001476510.1 157368521 5606953 310045..310590 1 NC_009832.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 310590 nusG 5606953 nusG Serratia proteamaculans 568 transcription antitermination protein NusG YP_001476510.1 310045 D 399741 CDS YP_001476511.1 157368522 5606954 310749..311177 1 NC_009832.1 PFAM: ribosomal protein L11; KEGG: sgl:SG0130 50S ribosomal protein L11; 50S ribosomal protein L11 311177 5606954 Spro_0273 Serratia proteamaculans 568 50S ribosomal protein L11 YP_001476511.1 310749 D 399741 CDS YP_001476512.1 157368523 5606955 311181..311885 1 NC_009832.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 311885 rplA 5606955 rplA Serratia proteamaculans 568 50S ribosomal protein L1 YP_001476512.1 311181 D 399741 CDS YP_001476513.1 157368524 5606962 312228..312725 1 NC_009832.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 312725 rplJ 5606962 rplJ Serratia proteamaculans 568 50S ribosomal protein L10 YP_001476513.1 312228 D 399741 CDS YP_001476514.1 157368525 5606963 312788..313153 1 NC_009832.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 313153 rplL 5606963 rplL Serratia proteamaculans 568 50S ribosomal protein L7/L12 YP_001476514.1 312788 D 399741 CDS YP_001476515.1 157368526 5606964 313487..317515 1 NC_009832.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 317515 rpoB 5606964 rpoB Serratia proteamaculans 568 DNA-directed RNA polymerase subunit beta YP_001476515.1 313487 D 399741 CDS YP_001476516.1 157368527 5607012 317634..321860 1 NC_009832.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 321860 5607012 Spro_0278 Serratia proteamaculans 568 DNA-directed RNA polymerase subunit beta' YP_001476516.1 317634 D 399741 CDS YP_001476517.1 157368528 5607013 complement(322193..323326) 1 NC_009832.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 323326 thiH 5607013 thiH Serratia proteamaculans 568 thiamine biosynthesis protein ThiH YP_001476517.1 322193 R 399741 CDS YP_001476518.1 157368529 5607020 complement(323326..324105) 1 NC_009832.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 324105 thiG 5607020 thiG Serratia proteamaculans 568 thiazole synthase YP_001476518.1 323326 R 399741 CDS YP_001476519.1 157368530 5607021 complement(324107..324307) 1 NC_009832.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 324307 5607021 Spro_0281 Serratia proteamaculans 568 sulfur carrier protein ThiS YP_001476519.1 324107 R 399741 CDS YP_001476520.1 157368531 5607022 complement(324304..325053) 1 NC_009832.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: eca:ECA0230 thiamine biosynthesis adenylyltransferase; UBA/THIF-type NAD/FAD binding protein 325053 5607022 Spro_0282 Serratia proteamaculans 568 UBA/THIF-type NAD/FAD binding protein YP_001476520.1 324304 R 399741 CDS YP_001476521.1 157368532 5607050 complement(325058..325696) 1 NC_009832.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 325696 5607050 Spro_0283 Serratia proteamaculans 568 thiamine-phosphate pyrophosphorylase YP_001476521.1 325058 R 399741 CDS YP_001476522.1 157368533 5607051 complement(325689..327632) 1 NC_009832.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 327632 5607051 Spro_0284 Serratia proteamaculans 568 thiamine biosynthesis protein ThiC YP_001476522.1 325689 R 399741 CDS YP_001476523.1 157368534 5607052 complement(327912..328415) 1 NC_009832.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 328415 5607052 Spro_0285 Serratia proteamaculans 568 anti-RNA polymerase sigma 70 factor YP_001476523.1 327912 R 399741 CDS YP_001476524.1 157368535 5607062 328515..329282 1 NC_009832.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 329282 nudC 5607062 nudC Serratia proteamaculans 568 NADH pyrophosphatase YP_001476524.1 328515 D 399741 CDS YP_001476525.1 157368536 5607063 329323..330387 1 NC_009832.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 330387 hemE 5607063 hemE Serratia proteamaculans 568 uroporphyrinogen decarboxylase YP_001476525.1 329323 D 399741 CDS YP_001476526.1 157368537 5607064 330397..331083 1 NC_009832.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; endonuclease V 331083 5607064 Spro_0288 Serratia proteamaculans 568 endonuclease V YP_001476526.1 330397 D 399741 CDS YP_001476527.1 157368538 5607111 331132..331722 1 NC_009832.1 PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein; hypothetical protein 331722 5607111 Spro_0289 Serratia proteamaculans 568 hypothetical protein YP_001476527.1 331132 D 399741 CDS YP_001476528.1 157368539 5607112 331911..332183 1 NC_009832.1 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 332183 5607112 Spro_0290 Serratia proteamaculans 568 transcriptional regulator HU subunit alpha YP_001476528.1 331911 D 399741 CDS YP_001476529.1 157368540 5607113 332253..332891 1 NC_009832.1 PFAM: protein of unknown function DUF1481; KEGG: yen:YE0301 hypothetical protein; hypothetical protein 332891 5607113 Spro_0291 Serratia proteamaculans 568 hypothetical protein YP_001476529.1 332253 D 399741 CDS YP_001476530.1 157368541 5607181 complement(332937..334220) 1 NC_009832.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 334220 5607181 Spro_0292 Serratia proteamaculans 568 phosphoribosylamine--glycine ligase YP_001476530.1 332937 R 399741 CDS YP_001476531.1 157368542 5607182 complement(334269..335858) 1 NC_009832.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 335858 purH 5607182 purH Serratia proteamaculans 568 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001476531.1 334269 R 399741 CDS YP_001476532.1 157368543 5607232 341925..347828 1 NC_009832.1 PFAM: coagulation factor 5/8 type domain protein; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: fno:Fnod_0251 hypothetical protein; coagulation factor 5/8 type domain-containing protein 347828 5607232 Spro_0294 Serratia proteamaculans 568 coagulation factor 5/8 type domain-containing protein YP_001476532.1 341925 D 399741 CDS YP_001476533.1 157368544 5607196 complement(347914..349566) 1 NC_009832.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 349566 actP 5607196 actP Serratia proteamaculans 568 acetate permease YP_001476533.1 347914 R 399741 CDS YP_001476534.1 157368545 5607197 complement(349563..349874) 1 NC_009832.1 PFAM: protein of unknown function DUF485; KEGG: yen:YE0308 hypothetical protein; hypothetical protein 349874 5607197 Spro_0296 Serratia proteamaculans 568 hypothetical protein YP_001476534.1 349563 R 399741 CDS YP_001476535.1 157368546 5607236 complement(349967..351925) 1 NC_009832.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 351925 5607236 Spro_0297 Serratia proteamaculans 568 acetyl-CoA synthetase YP_001476535.1 349967 R 399741 CDS YP_001476536.1 157368547 5607237 352747..354063 1 NC_009832.1 PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE0310 proton glutamate symport protein; sodium:dicarboxylate symporter 354063 5607237 Spro_0298 Serratia proteamaculans 568 sodium:dicarboxylate symporter YP_001476536.1 352747 D 399741 CDS YP_001476537.1 157368548 5607238 complement(354129..354878) 1 NC_009832.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: yen:YE2451 putative lipoprotein; peptidase M23B 354878 5607238 Spro_0299 Serratia proteamaculans 568 peptidase M23B YP_001476537.1 354129 R 399741 CDS YP_001476538.1 157368549 5607246 355043..355789 1 NC_009832.1 PFAM: protein of unknown function DUF81; KEGG: yen:YE3446 hypothetical protein; hypothetical protein 355789 5607246 Spro_0300 Serratia proteamaculans 568 hypothetical protein YP_001476538.1 355043 D 399741 CDS YP_001476539.1 157368550 5606946 356010..356936 1 NC_009832.1 KEGG: eca:ECA0516 hypothetical protein; hypothetical protein 356936 5606946 Spro_0301 Serratia proteamaculans 568 hypothetical protein YP_001476539.1 356010 D 399741 CDS YP_001476540.1 157368551 5607248 356933..358288 1 NC_009832.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: plu:plu1031 unnamed protein product; similar to DNA helicase; replicative DNA helicase 358288 5607248 Spro_0302 Serratia proteamaculans 568 replicative DNA helicase YP_001476540.1 356933 D 399741 CDS YP_001476541.1 157368552 5607268 358291..360027 1 NC_009832.1 KEGG: stt:t4228 hypothetical protein; hypothetical protein 360027 5607268 Spro_0303 Serratia proteamaculans 568 hypothetical protein YP_001476541.1 358291 D 399741 CDS YP_001476542.1 157368553 5607269 360027..360572 1 NC_009832.1 KEGG: eca:ECA0552 hypothetical protein; hypothetical protein 360572 5607269 Spro_0304 Serratia proteamaculans 568 hypothetical protein YP_001476542.1 360027 D 399741 CDS YP_001476543.1 157368554 5605994 360736..361365 1 NC_009832.1 KEGG: plu:plu1034 hypothetical protein; hypothetical protein 361365 5605994 Spro_0305 Serratia proteamaculans 568 hypothetical protein YP_001476543.1 360736 D 399741 CDS YP_001476544.1 157368555 5605995 361362..361625 1 NC_009832.1 KEGG: eca:ECA0522A hypothetical protein; hypothetical protein 361625 5605995 Spro_0306 Serratia proteamaculans 568 hypothetical protein YP_001476544.1 361362 D 399741 CDS YP_001476545.1 157368556 5605996 361740..363011 1 NC_009832.1 KEGG: plu:plu1035 hypothetical protein; hypothetical protein 363011 5605996 Spro_0307 Serratia proteamaculans 568 hypothetical protein YP_001476545.1 361740 D 399741 CDS YP_001476546.1 157368557 5605904 363199..363942 1 NC_009832.1 PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein; hypothetical protein 363942 5605904 Spro_0308 Serratia proteamaculans 568 hypothetical protein YP_001476546.1 363199 D 399741 CDS YP_001476547.1 157368558 5605905 363939..364514 1 NC_009832.1 hypothetical protein 364514 5605905 Spro_0309 Serratia proteamaculans 568 hypothetical protein YP_001476547.1 363939 D 399741 CDS YP_001476548.1 157368559 5605906 364529..366568 1 NC_009832.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 366568 5605906 Spro_0310 Serratia proteamaculans 568 DNA topoisomerase III YP_001476548.1 364529 D 399741 CDS YP_001476549.1 157368560 5603632 367237..367704 1 NC_009832.1 KEGG: plu:plu1038 hypothetical protein; hypothetical protein 367704 5603632 Spro_0311 Serratia proteamaculans 568 hypothetical protein YP_001476549.1 367237 D 399741 CDS YP_001476550.1 157368561 5603633 367777..368283 1 NC_009832.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein 368283 5603633 Spro_0312 Serratia proteamaculans 568 single-strand binding protein YP_001476550.1 367777 D 399741 CDS YP_001476551.1 157368562 5603634 complement(368618..368785) 1 NC_009832.1 KEGG: ent:Ent638_1532 helix-turn-helix-domain containing protein, AraC type; hypothetical protein 368785 5603634 Spro_0313 Serratia proteamaculans 568 hypothetical protein YP_001476551.1 368618 R 399741 CDS YP_001476552.1 157368563 5604858 368807..369052 1 NC_009832.1 hypothetical protein 369052 5604858 Spro_0314 Serratia proteamaculans 568 hypothetical protein YP_001476552.1 368807 D 399741 CDS YP_001476553.1 157368564 5604859 complement(369227..369493) 1 NC_009832.1 KEGG: dra:DR_1587 hypothetical protein; hypothetical protein 369493 5604859 Spro_0315 Serratia proteamaculans 568 hypothetical protein YP_001476553.1 369227 R 399741 CDS YP_001476554.1 157368565 5604860 369639..369965 1 NC_009832.1 KEGG: mca:MCA0276 killer suppression protein HigA, putative; killer suppression protein HigA 369965 5604860 Spro_0316 Serratia proteamaculans 568 killer suppression protein HigA YP_001476554.1 369639 D 399741 CDS YP_001476555.1 157368566 5604829 369962..371044 1 NC_009832.1 PFAM: protein of unknown function DUF955; KEGG: bxe:Bxe_A0212 hypothetical protein; hypothetical protein 371044 5604829 Spro_0317 Serratia proteamaculans 568 hypothetical protein YP_001476555.1 369962 D 399741 CDS YP_001476556.1 157368567 5604830 complement(371047..371991) 1 NC_009832.1 KEGG: bxe:Bxe_A0213 hypothetical protein; hypothetical protein 371991 5604830 Spro_0318 Serratia proteamaculans 568 hypothetical protein YP_001476556.1 371047 R 399741 CDS YP_001476557.1 157368568 5604747 complement(371991..372968) 1 NC_009832.1 PFAM: thymidylate synthase; KEGG: bxe:Bxe_A0214 putative thymidylate synthase; thymidylate synthase 372968 5604747 Spro_0319 Serratia proteamaculans 568 thymidylate synthase YP_001476557.1 371991 R 399741 CDS YP_001476558.1 157368569 5604748 373757..374401 1 NC_009832.1 KEGG: pap:PSPA7_4470 type IV B pilus protein; type IV B pilus protein 374401 5604748 Spro_0320 Serratia proteamaculans 568 type IV B pilus protein YP_001476558.1 373757 D 399741 CDS YP_001476559.1 157368570 5604749 374398..375141 1 NC_009832.1 KEGG: stt:t4255 hypothetical protein; hypothetical protein 375141 5604749 Spro_0321 Serratia proteamaculans 568 hypothetical protein YP_001476559.1 374398 D 399741 CDS YP_001476560.1 157368571 5604708 375152..375862 1 NC_009832.1 KEGG: eca:ECA0555 hypothetical protein; hypothetical protein 375862 5604708 Spro_0322 Serratia proteamaculans 568 hypothetical protein YP_001476560.1 375152 D 399741 CDS YP_001476561.1 157368572 5604709 375841..376533 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase 376533 5604709 Spro_0323 Serratia proteamaculans 568 lytic transglycosylase YP_001476561.1 375841 D 399741 CDS YP_001476562.1 157368573 5604710 376536..377060 1 NC_009832.1 KEGG: eca:ECA0557 hypothetical protein; hypothetical protein 377060 5604710 Spro_0324 Serratia proteamaculans 568 hypothetical protein YP_001476562.1 376536 D 399741 CDS YP_001476563.1 157368574 5604648 377057..377647 1 NC_009832.1 PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease 377647 5604648 Spro_0325 Serratia proteamaculans 568 restriction endonuclease YP_001476563.1 377057 D 399741 CDS YP_001476564.1 157368575 5604649 377644..379758 1 NC_009832.1 KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein 379758 5604649 Spro_0326 Serratia proteamaculans 568 putative plasmid transfer protein YP_001476564.1 377644 D 399741 CDS YP_001476565.1 157368576 5604650 379739..380497 1 NC_009832.1 KEGG: eca:ECA0561 hypothetical protein; hypothetical protein 380497 5604650 Spro_0327 Serratia proteamaculans 568 hypothetical protein YP_001476565.1 379739 D 399741 CDS YP_001476566.1 157368577 5604646 complement(380724..381341) 1 NC_009832.1 KEGG: eca:ECA0563 hypothetical protein; hypothetical protein 381341 5604646 Spro_0328 Serratia proteamaculans 568 hypothetical protein YP_001476566.1 380724 R 399741 CDS YP_001476567.1 157368578 5604647 381523..381855 1 NC_009832.1 PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 381855 5604647 Spro_0329 Serratia proteamaculans 568 hypothetical protein YP_001476567.1 381523 D 399741 CDS YP_001476568.1 157368579 5604424 381855..382097 1 NC_009832.1 KEGG: eca:ECA0565 hypothetical protein; hypothetical protein 382097 5604424 Spro_0330 Serratia proteamaculans 568 hypothetical protein YP_001476568.1 381855 D 399741 CDS YP_001476569.1 157368580 5604425 382153..382518 1 NC_009832.1 KEGG: plu:plu1080 hypothetical protein; hypothetical protein 382518 5604425 Spro_0331 Serratia proteamaculans 568 hypothetical protein YP_001476569.1 382153 D 399741 CDS YP_001476570.1 157368581 5604426 382530..382895 1 NC_009832.1 KEGG: eca:ECA0567 hypothetical protein; hypothetical protein 382895 5604426 Spro_0332 Serratia proteamaculans 568 hypothetical protein YP_001476570.1 382530 D 399741 CDS YP_001476571.1 157368582 5604372 382892..383563 1 NC_009832.1 KEGG: eca:ECA0568 hypothetical protein; hypothetical protein 383563 5604372 Spro_0333 Serratia proteamaculans 568 hypothetical protein YP_001476571.1 382892 D 399741 CDS YP_001476572.1 157368583 5604373 383560..384471 1 NC_009832.1 KEGG: eca:ECA0569 hypothetical protein; hypothetical protein 384471 5604373 Spro_0334 Serratia proteamaculans 568 hypothetical protein YP_001476572.1 383560 D 399741 CDS YP_001476573.1 157368584 5604374 384464..385960 1 NC_009832.1 KEGG: eca:ECA0570 hypothetical protein; hypothetical protein 385960 5604374 Spro_0335 Serratia proteamaculans 568 hypothetical protein YP_001476573.1 384464 D 399741 CDS YP_001476574.1 157368585 5604269 386110..386535 1 NC_009832.1 KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein 386535 5604269 Spro_0336 Serratia proteamaculans 568 putative lipoprotein YP_001476574.1 386110 D 399741 CDS YP_001476575.1 157368586 5604270 386535..389393 1 NC_009832.1 KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein 389393 5604270 Spro_0337 Serratia proteamaculans 568 putative plasmid-like protein YP_001476575.1 386535 D 399741 CDS YP_001476576.1 157368587 5604271 389390..389794 1 NC_009832.1 KEGG: eca:ECA0574 hypothetical protein; hypothetical protein 389794 5604271 Spro_0338 Serratia proteamaculans 568 hypothetical protein YP_001476576.1 389390 D 399741 CDS YP_001476577.1 157368588 5604228 389917..390909 1 NC_009832.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pst:PSPTO_2960 pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase family protein; pyridoxal-5'-phosphate-dependent protein subunit beta 390909 5604228 Spro_0339 Serratia proteamaculans 568 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001476577.1 389917 D 399741 CDS YP_001476578.1 157368589 5604229 390902..391936 1 NC_009832.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: vei:Veis_1206 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 391936 5604229 Spro_0340 Serratia proteamaculans 568 ornithine cyclodeaminase/mu-crystallin YP_001476578.1 390902 D 399741 CDS YP_001476579.1 157368590 5604230 391940..392929 1 NC_009832.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: ava:Ava_C0007 condensation domain; taurine catabolism dioxygenase TauD/TfdA 392929 5604230 Spro_0341 Serratia proteamaculans 568 taurine catabolism dioxygenase TauD/TfdA YP_001476579.1 391940 D 399741 CDS YP_001476580.1 157368591 5604226 392916..394655 1 NC_009832.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: bce:BC2456 peptide synthetase; amino acid adenylation domain-containing protein 394655 5604226 Spro_0342 Serratia proteamaculans 568 amino acid adenylation domain-containing protein YP_001476580.1 392916 D 399741 CDS YP_001476581.1 157368592 5604227 394655..395380 1 NC_009832.1 PFAM: Thioesterase; KEGG: bte:BTH_I2357 thioesterase type II; thioesterase 395380 5604227 Spro_0343 Serratia proteamaculans 568 thioesterase YP_001476581.1 394655 D 399741 CDS YP_001476582.1 157368593 5604214 395402..396676 1 NC_009832.1 PFAM: phosphoribosylglycinamide synthetase; KEGG: ypm:YP_3384 acetyl-CoA carboxylase; phosphoribosylglycinamide synthetase 396676 5604214 Spro_0344 Serratia proteamaculans 568 phosphoribosylglycinamide synthetase YP_001476582.1 395402 D 399741 CDS YP_001476583.1 157368594 5604215 396687..397859 1 NC_009832.1 coenzyme F390 synthetase-like protein 397859 5604215 Spro_0345 Serratia proteamaculans 568 coenzyme F390 synthetase-like protein YP_001476583.1 396687 D 399741 CDS YP_001476584.1 157368595 5604216 397882..399714 1 NC_009832.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: sus:Acid_4624 asparagine synthase (glutamine-hydrolyzing); asparagine synthase 399714 5604216 Spro_0346 Serratia proteamaculans 568 asparagine synthase YP_001476584.1 397882 D 399741 CDS YP_001476585.1 157368596 5604208 399715..400665 1 NC_009832.1 KEGG: bja:blr2082 hypothetical protein; hypothetical protein 400665 5604208 Spro_0347 Serratia proteamaculans 568 hypothetical protein YP_001476585.1 399715 D 399741 CDS YP_001476586.1 157368597 5604209 400801..401205 1 NC_009832.1 PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein 401205 5604209 Spro_0348 Serratia proteamaculans 568 hypothetical protein YP_001476586.1 400801 D 399741 CDS YP_001476587.1 157368598 5604210 401207..402214 1 NC_009832.1 PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein 402214 5604210 Spro_0349 Serratia proteamaculans 568 hypothetical protein YP_001476587.1 401207 D 399741 CDS YP_001476588.1 157368599 5604179 402225..403709 1 NC_009832.1 KEGG: eca:ECA0578 hypothetical protein; hypothetical protein 403709 5604179 Spro_0350 Serratia proteamaculans 568 hypothetical protein YP_001476588.1 402225 D 399741 CDS YP_001476589.1 157368600 5604180 403726..404097 1 NC_009832.1 KEGG: eca:ECA0579 hypothetical protein; hypothetical protein 404097 5604180 Spro_0351 Serratia proteamaculans 568 hypothetical protein YP_001476589.1 403726 D 399741 CDS YP_001476590.1 157368601 5604181 404094..405611 1 NC_009832.1 KEGG: eca:ECA0580 hypothetical protein; hypothetical protein 405611 5604181 Spro_0352 Serratia proteamaculans 568 hypothetical protein YP_001476590.1 404094 D 399741 CDS YP_001476591.1 157368602 5604010 complement(405612..405986) 1 NC_009832.1 KEGG: eca:ECA0581 hypothetical protein; hypothetical protein 405986 5604010 Spro_0353 Serratia proteamaculans 568 hypothetical protein YP_001476591.1 405612 R 399741 CDS YP_001476592.1 157368603 5604011 406249..406821 1 NC_009832.1 KEGG: osa:4352161 Os12g0450200; hypothetical protein 406821 5604011 Spro_0354 Serratia proteamaculans 568 hypothetical protein YP_001476592.1 406249 D 399741 CDS YP_001476593.1 157368604 5603942 complement(406808..407482) 1 NC_009832.1 KEGG: kpn:KPN_pKPN3p05885 transposase; transposase 407482 5603942 Spro_0355 Serratia proteamaculans 568 transposase YP_001476593.1 406808 R 399741 CDS YP_001476594.1 157368605 5603943 407515..408558 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_7234 integrase, catalytic region; Integrase catalytic subunit 408558 5603943 Spro_0356 Serratia proteamaculans 568 Integrase catalytic subunit YP_001476594.1 407515 D 399741 CDS YP_001476595.1 157368606 5603944 408555..409343 1 NC_009832.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pst:PSPTO_B0039 transposase/IS protein; transposase/IS protein 409343 5603944 Spro_0357 Serratia proteamaculans 568 transposase/IS protein YP_001476595.1 408555 D 399741 CDS YP_001476596.1 157368607 5603912 complement(409383..410204) 1 NC_009832.1 PFAM: transposase Tn3 family protein; KEGG: ent:Ent638_4224 transposase Tn3 family protein; transposase Tn3 family protein 410204 5603912 Spro_0358 Serratia proteamaculans 568 transposase Tn3 family protein YP_001476596.1 409383 R 399741 CDS YP_001476597.1 157368608 5603914 complement(411176..411460) 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: pae:PA0983 hypothetical protein; transposase IS3/IS911 family protein 411460 5603914 Spro_0361 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001476597.1 411176 R 399741 CDS YP_001476598.1 157368609 5603839 complement(411840..412328) 1 NC_009832.1 PFAM: DinB family protein; KEGG: eca:ECA0612 hypothetical protein; DinB family protein 412328 5603839 Spro_0362 Serratia proteamaculans 568 DinB family protein YP_001476598.1 411840 R 399741 CDS YP_001476599.1 157368610 5603840 complement(412613..412945) 1 NC_009832.1 KEGG: sen:SACE_4169 esterase/lipase; hypothetical protein 412945 5603840 Spro_0363 Serratia proteamaculans 568 hypothetical protein YP_001476599.1 412613 R 399741 CDS YP_001476600.1 157368611 5603841 413017..413646 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: fal:FRAAL5169 putative TetR-family transcriptional regulator; TetR family transcriptional regulator 413646 5603841 Spro_0364 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001476600.1 413017 D 399741 CDS YP_001476601.1 157368612 5603830 413848..415095 1 NC_009832.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: ypi:YpsIP31758_2550 paraquat-inducible protein A; PqiA family integral membrane protein 415095 5603830 Spro_0365 Serratia proteamaculans 568 PqiA family integral membrane protein YP_001476601.1 413848 D 399741 CDS YP_001476602.1 157368613 5603831 415079..416722 1 NC_009832.1 PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1574 putative paraquat-inducible protein B; paraquat-inducible protein B 416722 5603831 Spro_0366 Serratia proteamaculans 568 paraquat-inducible protein B YP_001476602.1 415079 D 399741 CDS YP_001476603.1 157368614 5603832 416719..417267 1 NC_009832.1 PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 417267 5603832 Spro_0367 Serratia proteamaculans 568 hypothetical protein YP_001476603.1 416719 D 399741 CDS YP_001476604.1 157368615 5603697 417843..418454 1 NC_009832.1 PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 418454 5603697 Spro_0368 Serratia proteamaculans 568 hypothetical protein YP_001476604.1 417843 D 399741 CDS YP_001476605.1 157368616 5603698 418454..418615 1 NC_009832.1 KEGG: ppu:PP_5396 ISPpu14, transposase Orf3; hypothetical protein 418615 5603698 Spro_0369 Serratia proteamaculans 568 hypothetical protein YP_001476605.1 418454 D 399741 CDS YP_001476606.1 157368617 5603608 418716..418871 1 NC_009832.1 hypothetical protein 418871 5603608 Spro_0370 Serratia proteamaculans 568 hypothetical protein YP_001476606.1 418716 D 399741 CDS YP_001476607.1 157368618 5603609 418937..419143 1 NC_009832.1 KEGG: pfl:PFL_2517 hypothetical protein; hypothetical protein 419143 5603609 Spro_0371 Serratia proteamaculans 568 hypothetical protein YP_001476607.1 418937 D 399741 CDS YP_001476608.1 157368619 5603610 419335..420297 1 NC_009832.1 KEGG: rha:RHA1_ro01207 hypothetical protein; hypothetical protein 420297 5603610 Spro_0372 Serratia proteamaculans 568 hypothetical protein YP_001476608.1 419335 D 399741 CDS YP_001476609.1 157368620 5603589 complement(420594..421613) 1 NC_009832.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase domain-containing protein 421613 5603589 Spro_0373 Serratia proteamaculans 568 alpha/beta hydrolase domain-containing protein YP_001476609.1 420594 R 399741 CDS YP_001476610.1 157368621 5603590 422431..422853 1 NC_009832.1 PFAM: regulatory protein MarR; KEGG: sfr:Sfri_0578 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 422853 5603590 Spro_0374 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001476610.1 422431 D 399741 CDS YP_001476611.1 157368622 5603591 423041..423304 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: yen:YE1810 insertion element protein; transposase IS3/IS911 family protein 423304 5603591 Spro_0375 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001476611.1 423041 D 399741 CDS YP_001476612.1 157368623 5603577 423337..424161 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: sec:SC173 hypothetical protein B; Integrase catalytic subunit 424161 5603577 Spro_0376 Serratia proteamaculans 568 Integrase catalytic subunit YP_001476612.1 423337 D 399741 CDS YP_001476613.1 157368624 5603578 424320..425852 1 NC_009832.1 PFAM: Catalase domain protein; KEGG: bch:Bcen2424_3898 catalase; catalase 425852 5603578 Spro_0377 Serratia proteamaculans 568 catalase YP_001476613.1 424320 D 399741 CDS YP_001476614.1 157368625 5603579 425890..426450 1 NC_009832.1 PFAM: Ankyrin; KEGG: xcb:XC_4036 ankyrin-like protein; ankyrin 426450 5603579 Spro_0378 Serratia proteamaculans 568 ankyrin YP_001476614.1 425890 D 399741 CDS YP_001476615.1 157368626 5603559 complement(426582..426866) 1 NC_009832.1 KEGG: kpn:KPN_pKPN5p08239 hypothetical protein; hypothetical protein 426866 5603559 Spro_0379 Serratia proteamaculans 568 hypothetical protein YP_001476615.1 426582 R 399741 CDS YP_001476616.1 157368627 5603560 complement(426863..426967) 1 NC_009832.1 hypothetical protein 426967 5603560 Spro_0380 Serratia proteamaculans 568 hypothetical protein YP_001476616.1 426863 R 399741 CDS YP_001476617.1 157368628 5603448 complement(426993..427436) 1 NC_009832.1 PFAM: Resolvase domain; KEGG: psp:PSPPH_A0101 DNA invertase; resolvase domain-containing protein 427436 5603448 Spro_0381 Serratia proteamaculans 568 resolvase domain-containing protein YP_001476617.1 426993 R 399741 CDS YP_001476618.1 157368629 5603449 427534..430092 1 NC_009832.1 TIGRFAM: YD repeat protein; KEGG: sbm:Shew185_0579 YD repeat protein; YD repeat-containing protein 430092 5603449 Spro_0382 Serratia proteamaculans 568 YD repeat-containing protein YP_001476618.1 427534 D 399741 CDS YP_001476619.1 157368630 5603450 430865..431011 1 NC_009832.1 hypothetical protein 431011 5603450 Spro_0383 Serratia proteamaculans 568 hypothetical protein YP_001476619.1 430865 D 399741 CDS YP_001476620.1 157368631 5603130 431324..432442 1 NC_009832.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xfa:XF1743 esterase; alpha/beta hydrolase domain-containing protein 432442 5603130 Spro_0384 Serratia proteamaculans 568 alpha/beta hydrolase domain-containing protein YP_001476620.1 431324 D 399741 CDS YP_001476621.1 157368632 5603131 complement(432434..433564) 1 NC_009832.1 KEGG: sco:SCO7479 integral membrane protein; hypothetical protein 433564 5603131 Spro_0385 Serratia proteamaculans 568 hypothetical protein YP_001476621.1 432434 R 399741 CDS YP_001476622.1 157368633 5603132 433817..434737 1 NC_009832.1 KEGG: psp:PSPPH_B0058 site-specific recombinase, phage integrase family; phage integrase family site specific recombinase 434737 5603132 Spro_0386 Serratia proteamaculans 568 phage integrase family site specific recombinase YP_001476622.1 433817 D 399741 CDS YP_001476623.1 157368634 5603115 complement(434715..435566) 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 435566 5603115 Spro_0387 Serratia proteamaculans 568 Integrase catalytic subunit YP_001476623.1 434715 R 399741 CDS YP_001476624.1 157368635 5603116 complement(435587..435865) 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 435865 5603116 Spro_0388 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001476624.1 435587 R 399741 CDS YP_001476625.1 157368636 5603117 436410..437447 1 NC_009832.1 hypothetical protein 437447 5603117 Spro_0389 Serratia proteamaculans 568 hypothetical protein YP_001476625.1 436410 D 399741 CDS YP_001476626.1 157368637 5602970 438505..439392 1 NC_009832.1 KEGG: plu:plu1152 hypothetical protein; hypothetical protein 439392 5602970 Spro_0390 Serratia proteamaculans 568 hypothetical protein YP_001476626.1 438505 D 399741 CDS YP_001476627.1 157368638 5602971 439697..440668 1 NC_009832.1 KEGG: sty:HCM2.0043 hypothetical protein; hypothetical protein 440668 5602971 Spro_0391 Serratia proteamaculans 568 hypothetical protein YP_001476627.1 439697 D 399741 CDS YP_001476628.1 157368639 5602972 complement(441073..441267) 1 NC_009832.1 hypothetical protein 441267 5602972 Spro_0392 Serratia proteamaculans 568 hypothetical protein YP_001476628.1 441073 R 399741 CDS YP_001476629.1 157368640 5602938 442052..442411 1 NC_009832.1 hypothetical protein 442411 5602938 Spro_0393 Serratia proteamaculans 568 hypothetical protein YP_001476629.1 442052 D 399741 CDS YP_001476630.1 157368641 5602939 442525..443127 1 NC_009832.1 KEGG: stt:t4289 hypothetical protein; hypothetical protein 443127 5602939 Spro_0394 Serratia proteamaculans 568 hypothetical protein YP_001476630.1 442525 D 399741 CDS YP_001476631.1 157368642 5602912 443174..444208 1 NC_009832.1 PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein 444208 5602912 Spro_0395 Serratia proteamaculans 568 hypothetical protein YP_001476631.1 443174 D 399741 CDS YP_001476632.1 157368643 5602913 444220..444483 1 NC_009832.1 KEGG: yen:YE3459 hypothetical protein; hypothetical protein 444483 5602913 Spro_0396 Serratia proteamaculans 568 hypothetical protein YP_001476632.1 444220 D 399741 CDS YP_001476633.1 157368644 5602914 444600..445523 1 NC_009832.1 PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein 445523 5602914 Spro_0397 Serratia proteamaculans 568 hypothetical protein YP_001476633.1 444600 D 399741 CDS YP_001476634.1 157368645 5602770 complement(445792..446544) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2523 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 446544 5602770 Spro_0398 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476634.1 445792 R 399741 CDS YP_001476635.1 157368646 5602771 446810..447493 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein; LuxR family transcriptional regulator 447493 5602771 Spro_0399 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476635.1 446810 D 399741 CDS YP_001476636.1 157368647 5602772 448292..450004 1 NC_009832.1 PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein; relaxase 450004 5602772 Spro_0400 Serratia proteamaculans 568 relaxase YP_001476636.1 448292 D 399741 CDS YP_001476637.1 157368648 5602765 450072..451085 1 NC_009832.1 PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein; integrase family protein 451085 5602765 Spro_0401 Serratia proteamaculans 568 integrase family protein YP_001476637.1 450072 D 399741 CDS YP_001476638.1 157368649 5606591 complement(451519..452109) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: ypk:y0598 hypothetical protein; putative transcriptional regulator 452109 5606591 Spro_0402 Serratia proteamaculans 568 putative transcriptional regulator YP_001476638.1 451519 R 399741 CDS YP_001476639.1 157368650 5602767 complement(452135..453820) 1 NC_009832.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 453820 dipZ 5602767 dipZ Serratia proteamaculans 568 thiol:disulfide interchange protein YP_001476639.1 452135 R 399741 CDS YP_001476640.1 157368651 5602737 complement(453817..454140) 1 NC_009832.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 454140 5602737 Spro_0404 Serratia proteamaculans 568 divalent-cation tolerance protein CutA YP_001476640.1 453817 R 399741 CDS YP_001476641.1 157368652 5602738 complement(454263..455564) 1 NC_009832.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 455564 5602738 Spro_0405 Serratia proteamaculans 568 anaerobic C4-dicarboxylate transporter YP_001476641.1 454263 R 399741 CDS YP_001476642.1 157368653 5602704 complement(455690..457126) 1 NC_009832.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 457126 aspA 5602704 aspA Serratia proteamaculans 568 aspartate ammonia-lyase YP_001476642.1 455690 R 399741 CDS YP_001476643.1 157368654 5602705 457427..457963 1 NC_009832.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: yen:YE0352 hypothetical protein; FxsA cytoplasmic membrane protein 457963 5602705 Spro_0407 Serratia proteamaculans 568 FxsA cytoplasmic membrane protein YP_001476643.1 457427 D 399741 CDS YP_001476644.1 157368655 5602706 458149..458442 1 NC_009832.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 458442 groES 5602706 groES Serratia proteamaculans 568 co-chaperonin GroES YP_001476644.1 458149 D 399741 CDS YP_001476645.1 157368656 5602689 458487..460133 1 NC_009832.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: stm:STM4330 chaperone Hsp60 with peptide-dependent ATPase activity, affects cell division; chaperonin GroEL 460133 5602689 Spro_0409 Serratia proteamaculans 568 chaperonin GroEL YP_001476645.1 458487 D 399741 CDS YP_001476646.1 157368657 5602690 460376..460720 1 NC_009832.1 KEGG: ypi:YpsIP31758_3674 hypothetical protein; hypothetical protein 460720 5602690 Spro_0410 Serratia proteamaculans 568 hypothetical protein YP_001476646.1 460376 D 399741 CDS YP_001476647.1 157368658 5602691 complement(460800..461828) 1 NC_009832.1 KEGG: yen:YE0356 hypothetical protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 461828 5602691 Spro_0411 Serratia proteamaculans 568 lysine 2,3-aminomutase YodO family protein YP_001476647.1 460800 R 399741 CDS YP_001476648.1 157368659 5602637 461871..462437 1 NC_009832.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 462437 5602637 Spro_0412 Serratia proteamaculans 568 elongation factor P YP_001476648.1 461871 D 399741 CDS YP_001476649.1 157368660 5602638 462508..462636 1 NC_009832.1 PFAM: Entericidin EcnAB; KEGG: sec:SC4214 putative entericidin A precursor; entericidin EcnAB 462636 5602638 Spro_0413 Serratia proteamaculans 568 entericidin EcnAB YP_001476649.1 462508 D 399741 CDS YP_001476650.1 157368661 5602639 462759..462890 1 NC_009832.1 PFAM: Entericidin EcnAB; KEGG: eca:ECA3975 entericidin B; entericidin EcnAB 462890 5602639 Spro_0414 Serratia proteamaculans 568 entericidin EcnAB YP_001476650.1 462759 D 399741 CDS YP_001476651.1 157368662 5602591 463108..463434 1 NC_009832.1 PFAM: small multidrug resistance protein; KEGG: stm:STM4338 putative DMT superfamily transport protein; small multidrug resistance protein 463434 5602591 Spro_0415 Serratia proteamaculans 568 small multidrug resistance protein YP_001476651.1 463108 D 399741 CDS YP_001476652.1 157368663 5602592 complement(463478..463837) 1 NC_009832.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 463837 5602592 Spro_0416 Serratia proteamaculans 568 fumarate reductase subunit D YP_001476652.1 463478 R 399741 CDS YP_001476653.1 157368664 5602593 complement(463850..464242) 1 NC_009832.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 464242 5602593 Spro_0417 Serratia proteamaculans 568 fumarate reductase subunit C YP_001476653.1 463850 R 399741 CDS YP_001476654.1 157368665 5602517 complement(464258..464992) 1 NC_009832.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 464992 5602517 Spro_0418 Serratia proteamaculans 568 fumarate reductase iron-sulfur subunit YP_001476654.1 464258 R 399741 CDS YP_001476655.1 157368666 5602518 complement(464985..466781) 1 NC_009832.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 466781 5602518 Spro_0419 Serratia proteamaculans 568 fumarate reductase flavoprotein subunit YP_001476655.1 464985 R 399741 CDS YP_001476656.1 157368667 5602500 467167..468144 1 NC_009832.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 468144 5602500 Spro_0420 Serratia proteamaculans 568 lysyl-tRNA synthetase YP_001476656.1 467167 D 399741 CDS YP_001476657.1 157368668 5602501 complement(468327..471674) 1 NC_009832.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ypi:YpsIP31758_3664 mechanosensitive ion channel domain protein; hypothetical protein 471674 5602501 Spro_0421 Serratia proteamaculans 568 hypothetical protein YP_001476657.1 468327 R 399741 CDS YP_001476658.1 157368669 5602502 complement(471688..472638) 1 NC_009832.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 472638 psd 5602502 psd Serratia proteamaculans 568 phosphatidylserine decarboxylase YP_001476658.1 471688 R 399741 CDS YP_001476659.1 157368670 5602464 complement(472660..473709) 1 NC_009832.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 473709 5602464 Spro_0423 Serratia proteamaculans 568 ribosome-associated GTPase YP_001476659.1 472660 R 399741 CDS YP_001476660.1 157368671 5602465 473893..474438 1 NC_009832.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 474438 5602465 Spro_0424 Serratia proteamaculans 568 oligoribonuclease YP_001476660.1 473893 D 399741 CDS YP_001476661.1 157368672 5606130 complement(475289..476428) 1 NC_009832.1 TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: eca:ECA3940 putative 4Fe-4S binding protein; putative iron-sulfur cluster binding protein 476428 5606130 Spro_0425 Serratia proteamaculans 568 putative iron-sulfur cluster binding protein YP_001476661.1 475289 R 399741 CDS YP_001476662.1 157368673 5606922 476550..477938 1 NC_009832.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: yen:YE0372 hypothetical protein; hypothetical protein 477938 5606922 Spro_0426 Serratia proteamaculans 568 hypothetical protein YP_001476662.1 476550 D 399741 CDS YP_001476663.1 157368674 5606923 477953..478423 1 NC_009832.1 possibly involved in cell wall synthesis; putative ATPase 478423 5606923 Spro_0427 Serratia proteamaculans 568 putative ATPase YP_001476663.1 477953 D 399741 CDS YP_001476664.1 157368675 5606924 478431..480224 1 NC_009832.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: yen:YE0374 putative N-acetylmuramoyl-L-alanine amidase-family protein; N-acetylmuramoyl-L-alanine amidase 480224 5606924 Spro_0428 Serratia proteamaculans 568 N-acetylmuramoyl-L-alanine amidase YP_001476664.1 478431 D 399741 CDS YP_001476665.1 157368676 5603683 480246..482120 1 NC_009832.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 482120 mutL 5603683 mutL Serratia proteamaculans 568 DNA mismatch repair protein YP_001476665.1 480246 D 399741 CDS YP_001476666.1 157368677 5603684 482113..483054 1 NC_009832.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 483054 miaA 5603684 miaA Serratia proteamaculans 568 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001476666.1 482113 D 399741 CDS YP_001476667.1 157368678 5602862 483169..483477 1 NC_009832.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 483477 hfq 5602862 hfq Serratia proteamaculans 568 RNA-binding protein Hfq YP_001476667.1 483169 D 399741 CDS YP_001476668.1 157368679 5602863 483573..484853 1 NC_009832.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; putative GTPase HflX 484853 5602863 Spro_0432 Serratia proteamaculans 568 putative GTPase HflX YP_001476668.1 483573 D 399741 CDS YP_001476669.1 157368680 5602864 484922..486181 1 NC_009832.1 with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 486181 5602864 Spro_0433 Serratia proteamaculans 568 FtsH protease regulator HflK YP_001476669.1 484922 D 399741 CDS YP_001476670.1 157368681 5605412 486185..487192 1 NC_009832.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 487192 5605412 Spro_0434 Serratia proteamaculans 568 FtsH protease regulator HflC YP_001476670.1 486185 D 399741 CDS YP_001476671.1 157368682 5605413 487253..487456 1 NC_009832.1 KEGG: ypi:YpsIP31758_3649 hypothetical protein; hypothetical protein 487456 5605413 Spro_0435 Serratia proteamaculans 568 hypothetical protein YP_001476671.1 487253 D 399741 CDS YP_001476672.1 157368683 5605414 487554..488852 1 NC_009832.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 488852 5605414 Spro_0436 Serratia proteamaculans 568 adenylosuccinate synthetase YP_001476672.1 487554 D 399741 CDS YP_001476673.1 157368684 5604675 489086..489511 1 NC_009832.1 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 489511 5604675 Spro_0437 Serratia proteamaculans 568 transcriptional repressor NsrR YP_001476673.1 489086 D 399741 CDS YP_001476674.1 157368685 5604676 489571..492057 1 NC_009832.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 492057 5604676 Spro_0438 Serratia proteamaculans 568 exoribonuclease R YP_001476674.1 489571 D 399741 CDS YP_001476675.1 157368686 5604677 492117..492848 1 NC_009832.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 492848 5604677 Spro_0439 Serratia proteamaculans 568 23S rRNA (guanosine-2'-O-)-methyltransferase YP_001476675.1 492117 D 399741 CDS YP_001476676.1 157368687 5603629 492978..494612 1 NC_009832.1 catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; isovaleryl CoA dehydrogenase 494612 5603629 Spro_0440 Serratia proteamaculans 568 isovaleryl CoA dehydrogenase YP_001476676.1 492978 D 399741 CDS YP_001476677.1 157368688 5603630 494700..495098 1 NC_009832.1 PFAM: protein of unknown function DUF350; KEGG: eca:ECA3620 hypothetical protein; hypothetical protein 495098 5603630 Spro_0441 Serratia proteamaculans 568 hypothetical protein YP_001476677.1 494700 D 399741 CDS YP_001476678.1 157368689 5603631 complement(495095..495370) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: ent:Ent638_0367 protein of unknown function DUF1471; hypothetical protein 495370 5603631 Spro_0442 Serratia proteamaculans 568 hypothetical protein YP_001476678.1 495095 R 399741 CDS YP_001476679.1 157368690 5603192 complement(495493..495801) 1 NC_009832.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; putative biofilm stress and motility protein A 495801 5603192 Spro_0443 Serratia proteamaculans 568 putative biofilm stress and motility protein A YP_001476679.1 495493 R 399741 CDS YP_001476680.1 157368691 5603193 495928..496680 1 NC_009832.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 496680 5603193 Spro_0444 Serratia proteamaculans 568 esterase YP_001476680.1 495928 D 399741 CDS YP_001476681.1 157368692 5603232 complement(496774..497040) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0389 hypothetical protein; hypothetical protein 497040 5603232 Spro_0445 Serratia proteamaculans 568 hypothetical protein YP_001476681.1 496774 R 399741 CDS YP_001476682.1 157368693 5603233 497498..497896 1 NC_009832.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 497896 rpsF 5603233 rpsF Serratia proteamaculans 568 30S ribosomal protein S6 YP_001476682.1 497498 D 399741 CDS YP_001476683.1 157368694 5603234 497903..498220 1 NC_009832.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 498220 5603234 Spro_0447 Serratia proteamaculans 568 primosomal replication protein N YP_001476683.1 497903 D 399741 CDS YP_001476684.1 157368695 5603243 498225..498452 1 NC_009832.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 498452 rpsR 5603243 rpsR Serratia proteamaculans 568 30S ribosomal protein S18 YP_001476684.1 498225 D 399741 CDS YP_001476685.1 157368696 5603244 498492..498944 1 NC_009832.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 498944 rplI 5603244 rplI Serratia proteamaculans 568 50S ribosomal protein L9 YP_001476685.1 498492 D 399741 CDS YP_001476686.1 157368697 5603245 499055..499414 1 NC_009832.1 PFAM: protein of unknown function DUF488; KEGG: yen:YE2509 hypothetical protein; hypothetical protein 499414 5603245 Spro_0450 Serratia proteamaculans 568 hypothetical protein YP_001476686.1 499055 D 399741 CDS YP_001476687.1 157368698 5603246 complement(499411..500085) 1 NC_009832.1 PFAM: Opacity-associated protein A; Opacity-associated protein A domain protein; KEGG: yen:YE0397 hypothetical protein; opacity-associated protein A 500085 5603246 Spro_0451 Serratia proteamaculans 568 opacity-associated protein A YP_001476687.1 499411 R 399741 CDS YP_001476688.1 157368699 5603247 500372..500992 1 NC_009832.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 500992 5603247 Spro_0452 Serratia proteamaculans 568 peptidyl-prolyl cis-trans isomerase YP_001476688.1 500372 D 399741 CDS YP_001476689.1 157368700 5603248 complement(501039..502991) 1 NC_009832.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 502991 cpdB 5603248 cpdB Serratia proteamaculans 568 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_001476689.1 501039 R 399741 CDS YP_001476690.1 157368701 5603249 503245..503988 1 NC_009832.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 503988 5603249 Spro_0454 Serratia proteamaculans 568 adenosine-3'(2'),5'-bisphosphate nucleotidase YP_001476690.1 503245 D 399741 CDS YP_001476691.1 157368702 5603250 complement(503990..504547) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE0401 hypothetical protein; hypothetical protein 504547 5603250 Spro_0455 Serratia proteamaculans 568 hypothetical protein YP_001476691.1 503990 R 399741 CDS YP_001476692.1 157368703 5603251 504874..505080 1 NC_009832.1 PFAM: protein of unknown function DUF1107; KEGG: ent:Ent638_0395 protein of unknown function DUF1107; hypothetical protein 505080 5603251 Spro_0456 Serratia proteamaculans 568 hypothetical protein YP_001476692.1 504874 D 399741 CDS YP_001476693.1 157368704 5603267 complement(505347..506690) 1 NC_009832.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: ypi:YpsIP31758_3627 CBS/transporter associated domain protein; hypothetical protein 506690 5603267 Spro_0457 Serratia proteamaculans 568 hypothetical protein YP_001476693.1 505347 R 399741 CDS YP_001476694.1 157368705 5603268 complement(506868..507509) 1 NC_009832.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 507509 5603268 Spro_0458 Serratia proteamaculans 568 methionine sulfoxide reductase A YP_001476694.1 506868 R 399741 CDS YP_001476695.1 157368706 5603413 507797..509533 1 NC_009832.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: ypi:YpsIP31758_3625 surface antigen/outer membrane protein, OMP85 family; surface antigen (D15) 509533 5603413 Spro_0459 Serratia proteamaculans 568 surface antigen (D15) YP_001476695.1 507797 D 399741 CDS YP_001476696.1 157368707 5603414 509578..513348 1 NC_009832.1 PFAM: protein of unknown function DUF490; KEGG: yen:YE0406 hypothetical protein; hypothetical protein 513348 5603414 Spro_0460 Serratia proteamaculans 568 hypothetical protein YP_001476696.1 509578 D 399741 CDS YP_001476697.1 157368708 5603415 513405..513698 1 NC_009832.1 PFAM: AIG2 family protein; KEGG: yen:YE0407 hypothetical protein; AIG2 family protein 513698 5603415 Spro_0461 Serratia proteamaculans 568 AIG2 family protein YP_001476697.1 513405 D 399741 CDS YP_001476698.1 157368709 5603422 complement(513750..514280) 1 NC_009832.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 514280 5603422 Spro_0462 Serratia proteamaculans 568 inorganic pyrophosphatase YP_001476698.1 513750 R 399741 CDS YP_001476699.1 157368710 5603423 514537..516090 1 NC_009832.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE0409 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 516090 5603423 Spro_0463 Serratia proteamaculans 568 methyl-accepting chemotaxis sensory transducer YP_001476699.1 514537 D 399741 CDS YP_001476700.1 157368711 5603424 complement(516128..517132) 1 NC_009832.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 517132 5603424 Spro_0464 Serratia proteamaculans 568 fructose-1,6-bisphosphatase YP_001476700.1 516128 R 399741 CDS YP_001476701.1 157368712 5603428 517301..518680 1 NC_009832.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: yps:YPTB0457 UDP-N-acetylmuramate:L-Ala-D-Glu-meso- diaminopime late ligase; UDP-N-acetylmuramate 518680 5603428 Spro_0465 Serratia proteamaculans 568 UDP-N-acetylmuramate YP_001476701.1 517301 D 399741 CDS YP_001476702.1 157368713 5603429 complement(519049..519312) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein 519312 5603429 Spro_0466 Serratia proteamaculans 568 hypothetical protein YP_001476702.1 519049 R 399741 CDS YP_001476703.1 157368714 5603430 complement(519436..519699) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE0412 hypothetical protein; hypothetical protein 519699 5603430 Spro_0467 Serratia proteamaculans 568 hypothetical protein YP_001476703.1 519436 R 399741 CDS YP_001476704.1 157368715 5603479 complement(520105..520575) 1 NC_009832.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 520575 5603479 Spro_0468 Serratia proteamaculans 568 arginine repressor YP_001476704.1 520105 R 399741 CDS YP_001476705.1 157368716 5603480 521042..521980 1 NC_009832.1 oxidizes malate to oxaloacetate; malate dehydrogenase 521980 5603480 Spro_0469 Serratia proteamaculans 568 malate dehydrogenase YP_001476705.1 521042 D 399741 CDS YP_001476706.1 157368717 5603481 complement(522049..522309) 1 NC_009832.1 KEGG: ypi:YpsIP31758_3615 sugar fermentation stimulation protein B; putative transcriptional regulator Nlp 522309 5603481 Spro_0470 Serratia proteamaculans 568 putative transcriptional regulator Nlp YP_001476706.1 522049 R 399741 CDS YP_001476707.1 157368718 5603503 522570..522842 1 NC_009832.1 KEGG: ypi:YpsIP31758_3614 hypothetical protein; hypothetical protein 522842 5603503 Spro_0471 Serratia proteamaculans 568 hypothetical protein YP_001476707.1 522570 D 399741 CDS YP_001476708.1 157368719 5603504 complement(522892..523863) 1 NC_009832.1 PFAM: Polyprenyl synthetase; KEGG: eca:ECA0689 octaprenyl-diphosphate synthase; octaprenyl diphosphate synthase 523863 5603504 Spro_0472 Serratia proteamaculans 568 octaprenyl diphosphate synthase YP_001476708.1 522892 R 399741 CDS YP_001476709.1 157368720 5607336 524133..524444 1 NC_009832.1 PFAM: ribosomal protein L21; KEGG: eca:ECA0690 50S ribosomal protein L21; 50S ribosomal protein L21 524444 rplU 5607336 rplU Serratia proteamaculans 568 50S ribosomal protein L21 YP_001476709.1 524133 D 399741 CDS YP_001476710.1 157368721 5607337 524462..524719 1 NC_009832.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 524719 rpmA 5607337 rpmA Serratia proteamaculans 568 50S ribosomal protein L27 YP_001476710.1 524462 D 399741 CDS YP_001476711.1 157368722 5607338 524792..525796 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_3610 integral membrane protein; hypothetical protein 525796 5607338 Spro_0475 Serratia proteamaculans 568 hypothetical protein YP_001476711.1 524792 D 399741 CDS YP_001476712.1 157368723 5607298 525813..526985 1 NC_009832.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 526985 obgE 5607298 obgE Serratia proteamaculans 568 GTPase ObgE YP_001476712.1 525813 D 399741 CDS YP_001476713.1 157368724 5607299 complement(527026..528087) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE0422 two-component system sensor protein; sensor protein BasS/PmrB 528087 5607299 Spro_0477 Serratia proteamaculans 568 sensor protein BasS/PmrB YP_001476713.1 527026 R 399741 CDS YP_001476714.1 157368725 5607300 complement(528084..528746) 1 NC_009832.1 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 528746 5607300 Spro_0478 Serratia proteamaculans 568 DNA-binding transcriptional regulator BasR YP_001476714.1 528084 R 399741 CDS YP_001476715.1 157368726 5604772 complement(528755..530188) 1 NC_009832.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase/endopeptidase 530188 5604772 Spro_0479 Serratia proteamaculans 568 D-alanyl-D-alanine carboxypeptidase/endopeptidase YP_001476715.1 528755 R 399741 CDS YP_001476716.1 157368727 5604773 530445..530921 1 NC_009832.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: yen:YE0425 transcription elongation factor; transcription elongation factor GreA 530921 5604773 Spro_0480 Serratia proteamaculans 568 transcription elongation factor GreA YP_001476716.1 530445 D 399741 CDS YP_001476717.1 157368728 5604774 complement(531036..531329) 1 NC_009832.1 PFAM: protein of unknown function UPF0044; KEGG: stm:STM3298.S putative RNA-binding protein; hypothetical protein 531329 5604774 Spro_0481 Serratia proteamaculans 568 hypothetical protein YP_001476717.1 531036 R 399741 CDS YP_001476718.1 157368729 5606237 531474..532103 1 NC_009832.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 532103 rrmJ 5606237 rrmJ Serratia proteamaculans 568 23S rRNA methyltransferase J YP_001476718.1 531474 D 399741 CDS YP_001476719.1 157368730 5606238 532160..534091 1 NC_009832.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 534091 hflB 5606238 hflB Serratia proteamaculans 568 ATP-dependent metalloprotease YP_001476719.1 532160 D 399741 CDS YP_001476720.1 157368731 5606239 534184..535017 1 NC_009832.1 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 535017 folP 5606239 folP Serratia proteamaculans 568 dihydropteroate synthase YP_001476720.1 534184 D 399741 CDS YP_001476721.1 157368732 5603446 535025..536362 1 NC_009832.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 536362 glmM 5603446 glmM Serratia proteamaculans 568 phosphoglucosamine mutase YP_001476721.1 535025 D 399741 CDS YP_001476722.1 157368733 5603447 536614..536949 1 NC_009832.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: yen:YE0431 protein-export membrane protein; preprotein translocase subunit SecG 536949 secG 5603447 secG Serratia proteamaculans 568 preprotein translocase subunit SecG YP_001476722.1 536614 D 399741 CDS YP_001476723.2 229593539 5605711 537469..537921 1 NC_009832.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 537921 5605711 Spro_0487 Serratia proteamaculans 568 hypothetical protein YP_001476723.2 537469 D 399741 CDS YP_001476724.1 157368735 5603837 537943..539451 1 NC_009832.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 539451 nusA 5603837 nusA Serratia proteamaculans 568 transcription elongation factor NusA YP_001476724.1 537943 D 399741 CDS YP_001476725.1 157368736 5603838 539476..542163 1 NC_009832.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 542163 infB 5603838 infB Serratia proteamaculans 568 translation initiation factor IF-2 YP_001476725.1 539476 D 399741 CDS YP_001476726.1 157368737 5606536 542232..542642 1 NC_009832.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 542642 rbfA 5606536 rbfA Serratia proteamaculans 568 ribosome-binding factor A YP_001476726.1 542232 D 399741 CDS YP_001476727.1 157368738 5606537 542642..543586 1 NC_009832.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 543586 truB 5606537 truB Serratia proteamaculans 568 tRNA pseudouridine synthase B YP_001476727.1 542642 D 399741 CDS YP_001476728.1 157368739 5606538 543710..543979 1 NC_009832.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 543979 rpsO 5606538 rpsO Serratia proteamaculans 568 30S ribosomal protein S15 YP_001476728.1 543710 D 399741 CDS YP_001476729.1 157368740 5607233 544235..546352 1 NC_009832.1 KEGG: yen:YE0438 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 546352 5607233 Spro_0493 Serratia proteamaculans 568 polynucleotide phosphorylase/polyadenylase YP_001476729.1 544235 D 399741 CDS YP_001476730.1 157368741 5607234 546481..547365 1 NC_009832.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 547365 5607234 Spro_0494 Serratia proteamaculans 568 lipoprotein NlpI YP_001476730.1 546481 D 399741 CDS YP_001476731.1 157368742 5607235 547552..549513 1 NC_009832.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 549513 5607235 Spro_0495 Serratia proteamaculans 568 ATP-dependent RNA helicase DeaD YP_001476731.1 547552 D 399741 CDS YP_001476732.1 157368743 5607213 549660..550874 1 NC_009832.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: ypi:YpsIP31758_3810 YeeE/YedE family protein; hypothetical protein 550874 5607213 Spro_0496 Serratia proteamaculans 568 hypothetical protein YP_001476732.1 549660 D 399741 CDS YP_001476733.1 157368744 5607214 550871..551110 1 NC_009832.1 PFAM: SirA family protein; KEGG: net:Neut_1003 SirA family protein; hypothetical protein 551110 5607214 Spro_0497 Serratia proteamaculans 568 hypothetical protein YP_001476733.1 550871 D 399741 CDS YP_001476734.1 157368745 5607215 complement(551145..552170) 1 NC_009832.1 PFAM: luciferase family protein; KEGG: yen:YE0442 hypothetical protein; hypothetical protein 552170 5607215 Spro_0498 Serratia proteamaculans 568 hypothetical protein YP_001476734.1 551145 R 399741 CDS YP_001476735.1 157368746 5607136 552383..553354 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: plu:plu4516 unnamed protein product; highly similar to membrane fusion protein (MFP) of ABC transport system; secretion protein HlyD family protein 553354 5607136 Spro_0499 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001476735.1 552383 D 399741 CDS YP_001476736.1 157368747 5607137 553336..554490 1 NC_009832.1 PFAM: ABC-2 type transporter; KEGG: plu:plu4515 unnamed protein product; similar to permease protein of ABC transport system; ABC-2 type transporter 554490 5607137 Spro_0500 Serratia proteamaculans 568 ABC-2 type transporter YP_001476736.1 553336 D 399741 CDS YP_001476737.1 157368748 5607080 554487..555626 1 NC_009832.1 PFAM: ABC-2 type transporter; KEGG: plu:plu4514 unnamed protein product; similar to permease protein of ABC transport system; ABC-2 type transporter 555626 5607080 Spro_0501 Serratia proteamaculans 568 ABC-2 type transporter YP_001476737.1 554487 D 399741 CDS YP_001476738.1 157368749 5607081 555728..556849 1 NC_009832.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: ent:Ent638_0491 cupin 4 family protein; cupin 4 family protein 556849 5607081 Spro_0502 Serratia proteamaculans 568 cupin 4 family protein YP_001476738.1 555728 D 399741 CDS YP_001476739.1 157368750 5607082 complement(556936..557814) 1 NC_009832.1 PFAM: peptidase U32; KEGG: yen:YE0449 hypothetical protein; peptidase U32 557814 5607082 Spro_0503 Serratia proteamaculans 568 peptidase U32 YP_001476739.1 556936 R 399741 CDS YP_001476740.1 157368751 5607044 complement(557826..558821) 1 NC_009832.1 PFAM: peptidase U32; KEGG: ent:Ent638_3595 peptidase U32; peptidase U32 558821 5607044 Spro_0504 Serratia proteamaculans 568 peptidase U32 YP_001476740.1 557826 R 399741 CDS YP_001476741.1 157368752 5607045 559043..559564 1 NC_009832.1 PFAM: Sterol-binding domain protein; KEGG: yen:YE0451 putative lipid carrier protein; sterol-binding domain-containing protein 559564 5607045 Spro_0505 Serratia proteamaculans 568 sterol-binding domain-containing protein YP_001476741.1 559043 D 399741 CDS YP_001476742.1 157368753 5607046 559558..560061 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0452 putative acetyltransferase; GCN5-like N-acetyltransferase 560061 5607046 Spro_0506 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001476742.1 559558 D 399741 CDS YP_001476743.1 157368754 5607036 complement(560048..560401) 1 NC_009832.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: yen:YE0453 hypothetical protein; excinuclease ABC subunit C 560401 5607036 Spro_0507 Serratia proteamaculans 568 excinuclease ABC subunit C YP_001476743.1 560048 R 399741 CDS YP_001476744.1 157368755 5607037 complement(560448..561770) 1 NC_009832.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 561770 potE 5607037 potE Serratia proteamaculans 568 putrescine transporter YP_001476744.1 560448 R 399741 CDS YP_001476745.1 157368756 5607038 complement(561828..563999) 1 NC_009832.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: yen:YE0455 ornithine decarboxylase, inducible; ornithine decarboxylase 563999 5607038 Spro_0509 Serratia proteamaculans 568 ornithine decarboxylase YP_001476745.1 561828 R 399741 CDS YP_001476746.1 157368757 5607023 564804..565238 1 NC_009832.1 KEGG: ypp:YPDSF_3277 hypothetical protein; hypothetical protein 565238 5607023 Spro_0510 Serratia proteamaculans 568 hypothetical protein YP_001476746.1 564804 D 399741 CDS YP_001476747.1 157368758 5607024 565484..566122 1 NC_009832.1 KEGG: ypi:YpsIP31758_3569 hypothetical protein; hypothetical protein 566122 5607024 Spro_0511 Serratia proteamaculans 568 hypothetical protein YP_001476747.1 565484 D 399741 CDS YP_001476748.1 157368759 5607025 complement(566073..566855) 1 NC_009832.1 required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein 566855 phnP 5607025 phnP Serratia proteamaculans 568 carbon-phosphorus lyase complex accessory protein YP_001476748.1 566073 R 399741 CDS YP_001476749.1 157368760 5607004 complement(566870..567472) 1 NC_009832.1 KEGG: rpe:RPE_3116 putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol); putative acetyltransferase 567472 5607004 Spro_0513 Serratia proteamaculans 568 putative acetyltransferase YP_001476749.1 566870 R 399741 CDS YP_001476750.1 157368761 5607005 complement(567469..568038) 1 NC_009832.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: ypi:YpsIP31758_3567 putative phosphonate metabolism ribose 1,5-bisphosphokinase PhnN; ribose 1,5-bisphosphokinase 568038 5607005 Spro_0514 Serratia proteamaculans 568 ribose 1,5-bisphosphokinase YP_001476750.1 567469 R 399741 CDS YP_001476751.1 157368762 5607001 complement(568038..569174) 1 NC_009832.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ypn:YPN_0624 PhnM protein; phosphonate metabolism protein PhnM 569174 5607001 Spro_0515 Serratia proteamaculans 568 phosphonate metabolism protein PhnM YP_001476751.1 568038 R 399741 CDS YP_001476752.1 157368763 5607002 complement(569174..569878) 1 NC_009832.1 KEGG: ypp:YPDSF_3272 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 569878 5607002 Spro_0516 Serratia proteamaculans 568 phosphonate C-P lyase system protein PhnL YP_001476752.1 569174 R 399741 CDS YP_001476753.1 157368764 5607003 complement(569895..570683) 1 NC_009832.1 KEGG: yen:YE0473 phosphonates transport ATP-binding protein; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 570683 phnK 5607003 phnK Serratia proteamaculans 568 phosphonate C-P lyase system protein PhnK YP_001476753.1 569895 R 399741 CDS YP_001476754.1 157368765 5606998 complement(570683..571543) 1 NC_009832.1 PFAM: phosphonate metabolism PhnJ; KEGG: ypi:YpsIP31758_3563 phosphonate metabolism protein PhnJ; phosphonate metabolism protein PhnJ 571543 5606998 Spro_0518 Serratia proteamaculans 568 phosphonate metabolism protein PhnJ YP_001476754.1 570683 R 399741 CDS YP_001476755.1 157368766 5606999 complement(571536..572621) 1 NC_009832.1 PFAM: phosphonate metabolism; KEGG: ypi:YpsIP31758_3562 phosphonate metabolism protein PhnI; phosphonate metabolism protein PhnI 572621 5606999 Spro_0519 Serratia proteamaculans 568 phosphonate metabolism protein PhnI YP_001476755.1 571536 R 399741 CDS YP_001476756.1 157368767 5607000 complement(572621..573202) 1 NC_009832.1 PFAM: phosphonate metabolism; KEGG: yen:YE0476 PhnH protein; carbon-phosphorus lyase complex subunit 573202 phnH 5607000 phnH Serratia proteamaculans 568 carbon-phosphorus lyase complex subunit YP_001476756.1 572621 R 399741 CDS YP_001476757.1 157368768 5606286 complement(573206..573649) 1 NC_009832.1 PFAM: phosphonate metabolism PhnG; KEGG: yen:YE0477 PhnG protein; phosphonate metabolism protein PhnG 573649 5606286 Spro_0521 Serratia proteamaculans 568 phosphonate metabolism protein PhnG YP_001476757.1 573206 R 399741 CDS YP_001476758.1 157368769 5606287 complement(573650..574378) 1 NC_009832.1 may be involved in phosphonate uptake and biodegradation; phosphonate metabolism transcriptional regulator PhnF 574378 5606287 Spro_0522 Serratia proteamaculans 568 phosphonate metabolism transcriptional regulator PhnF YP_001476758.1 573650 R 399741 CDS YP_001476759.1 157368770 5606288 574538..575659 1 NC_009832.1 PFAM: permease; KEGG: ssn:SSON_3297 hypothetical protein; permease 575659 5606288 Spro_0523 Serratia proteamaculans 568 permease YP_001476759.1 574538 D 399741 CDS YP_001476760.1 157368771 5606947 complement(575731..576195) 1 NC_009832.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 576195 nrdG 5606947 nrdG Serratia proteamaculans 568 anaerobic ribonucleotide reductase-activating protein YP_001476760.1 575731 R 399741 CDS YP_001476761.1 157368772 5606948 complement(576256..578394) 1 NC_009832.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 578394 5606948 Spro_0525 Serratia proteamaculans 568 anaerobic ribonucleoside triphosphate reductase YP_001476761.1 576256 R 399741 CDS YP_001476762.1 157368773 5606949 complement(578667..579575) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0483 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 579575 5606949 Spro_0526 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476762.1 578667 R 399741 CDS YP_001476763.1 157368774 5606914 579680..580204 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: yen:YE0484 putative oxidoreductase; NAD(P)H dehydrogenase (quinone) 580204 5606914 Spro_0527 Serratia proteamaculans 568 NAD(P)H dehydrogenase (quinone) YP_001476763.1 579680 D 399741 CDS YP_001476764.1 157368775 5606915 complement(580232..581896) 1 NC_009832.1 KEGG: yen:YE3773 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; trehalose-6-phosphate hydrolase 581896 5606915 Spro_0528 Serratia proteamaculans 568 trehalose-6-phosphate hydrolase YP_001476764.1 580232 R 399741 CDS YP_001476765.1 157368776 5606893 complement(581942..583357) 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunits IIBC 583357 5606893 Spro_0529 Serratia proteamaculans 568 PTS system trehalose(maltose)-specific transporter subunits IIBC YP_001476765.1 581942 R 399741 CDS YP_001476766.1 157368777 5606894 583679..584092 1 NC_009832.1 KEGG: ssn:SSON_PB07 entry exclusion protein 2; entry exclusion protein 2 584092 5606894 Spro_0530 Serratia proteamaculans 568 entry exclusion protein 2 YP_001476766.1 583679 D 399741 CDS YP_001476767.1 157368778 5606895 complement(584203..584460) 1 NC_009832.1 PFAM: Colicin D; KEGG: ypm:YP_3568 putative colicin immunity protein; colicin D 584460 5606895 Spro_0531 Serratia proteamaculans 568 colicin D YP_001476767.1 584203 R 399741 CDS YP_001476768.1 157368779 5606884 complement(584466..586424) 1 NC_009832.1 PFAM: S-type Pyocin domain protein; KEGG: pap:PSPA7_3037 killer protein of pyocin S3; S-type pyocin domain-containing protein 586424 5606884 Spro_0532 Serratia proteamaculans 568 S-type pyocin domain-containing protein YP_001476768.1 584466 R 399741 CDS YP_001476769.1 157368780 5606885 complement(586523..587659) 1 NC_009832.1 KEGG: sgl:SG1235 hypothetical protein; hypothetical protein 587659 5606885 Spro_0533 Serratia proteamaculans 568 hypothetical protein YP_001476769.1 586523 R 399741 CDS YP_001476770.1 157368781 5606886 complement(587957..588904) 1 NC_009832.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor 588904 treR 5606886 treR Serratia proteamaculans 568 trehalose repressor YP_001476770.1 587957 R 399741 CDS YP_001476771.1 157368782 5606869 589380..592088 1 NC_009832.1 P-type ATPase involved in magnesium influx; magnesium-transporting ATPase MgtA 592088 5606869 Spro_0535 Serratia proteamaculans 568 magnesium-transporting ATPase MgtA YP_001476771.1 589380 D 399741 CDS YP_001476772.1 157368783 5606870 592234..594627 1 NC_009832.1 PFAM: Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: ent:Ent638_0442 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 594627 5606870 Spro_0536 Serratia proteamaculans 568 beta-N-acetylhexosaminidase YP_001476772.1 592234 D 399741 CDS YP_001476773.1 157368784 5606871 complement(594688..595416) 1 NC_009832.1 PFAM: 20S proteasome A and B subunits; KEGG: yen:YE3772 hypothetical protein; 20S proteasome subunits A and B 595416 5606871 Spro_0537 Serratia proteamaculans 568 20S proteasome subunits A and B YP_001476773.1 594688 R 399741 CDS YP_001476774.1 157368785 5606852 complement(595492..596286) 1 NC_009832.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: yen:YE3771 hypothetical protein; transglutaminase domain-containing protein 596286 5606852 Spro_0538 Serratia proteamaculans 568 transglutaminase domain-containing protein YP_001476774.1 595492 R 399741 CDS YP_001476775.1 157368786 5606853 complement(596283..597212) 1 NC_009832.1 PFAM: protein of unknown function DUF403; KEGG: yen:YE3770 hypothetical protein; hypothetical protein 597212 5606853 Spro_0539 Serratia proteamaculans 568 hypothetical protein YP_001476775.1 596283 R 399741 CDS YP_001476776.1 157368787 5606854 complement(597206..598684) 1 NC_009832.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: yen:YE3769 hypothetical protein; hypothetical protein 598684 5606854 Spro_0540 Serratia proteamaculans 568 hypothetical protein YP_001476776.1 597206 R 399741 CDS YP_001476777.1 157368788 5606840 complement(602093..602479) 1 NC_009832.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: yen:YE3768 hypothetical protein; putative endoribonuclease L-PSP 602479 5606840 Spro_0543 Serratia proteamaculans 568 putative endoribonuclease L-PSP YP_001476777.1 602093 R 399741 CDS YP_001476778.1 157368789 5606810 complement(602578..603042) 1 NC_009832.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 603042 5606810 Spro_0544 Serratia proteamaculans 568 aspartate carbamoyltransferase regulatory subunit YP_001476778.1 602578 R 399741 CDS YP_001476779.1 157368790 5606811 complement(603055..603990) 1 NC_009832.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 603990 pyrB 5606811 pyrB Serratia proteamaculans 568 aspartate carbamoyltransferase catalytic subunit YP_001476779.1 603055 R 399741 CDS YP_001476780.1 157368791 5606812 complement(604294..605298) 1 NC_009832.1 PFAM: transport system permease protein; KEGG: eca:ECA4256 putative iron(III) ABC transporter permease protein; transport system permease 605298 5606812 Spro_0546 Serratia proteamaculans 568 transport system permease YP_001476780.1 604294 R 399741 CDS YP_001476781.1 157368792 5606789 complement(605298..606254) 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: eca:ECA4255 putative iron(III) ABC transporter, periplasmic-binding protein; periplasmic binding protein 606254 5606789 Spro_0547 Serratia proteamaculans 568 periplasmic binding protein YP_001476781.1 605298 R 399741 CDS YP_001476782.1 157368793 5606790 complement(606376..607173) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA4254 putative iron(III) ABC transporter ATP-binding protein; ABC transporter-like protein 607173 5606790 Spro_0548 Serratia proteamaculans 568 ABC transporter-like protein YP_001476782.1 606376 R 399741 CDS YP_001476783.1 157368794 5606791 complement(607193..608434) 1 NC_009832.1 KEGG: kpn:KPN_04792 hypothetical protein; hypothetical protein 608434 5606791 Spro_0549 Serratia proteamaculans 568 hypothetical protein YP_001476783.1 607193 R 399741 CDS YP_001476784.1 157368795 5606761 608628..609491 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: kpn:KPN_04798 putative transcriptional regulator (N-terminal); putative sugar-binding domain of regulator protein (C-terminal); RpiR family transcriptional regulator 609491 5606761 Spro_0550 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001476784.1 608628 D 399741 CDS YP_001476785.1 157368796 5606762 609529..610968 1 NC_009832.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: kpn:KPN_04793 hypothetical protein; N-acyl-D-amino-acid deacylase 610968 5606762 Spro_0551 Serratia proteamaculans 568 N-acyl-D-amino-acid deacylase YP_001476785.1 609529 D 399741 CDS YP_001476786.1 157368797 5606763 610986..611384 1 NC_009832.1 PFAM: Endoribonuclease L-PSP; KEGG: kpn:KPN_04794 hypothetical protein; endoribonuclease L-PSP 611384 5606763 Spro_0552 Serratia proteamaculans 568 endoribonuclease L-PSP YP_001476786.1 610986 D 399741 CDS YP_001476787.1 157368798 5606731 complement(611437..613005) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE0491 ABC transporter, substrate binding protein; extracellular solute-binding protein 613005 5606731 Spro_0553 Serratia proteamaculans 568 extracellular solute-binding protein YP_001476787.1 611437 R 399741 CDS YP_001476788.1 157368799 5606732 complement(613267..614286) 1 NC_009832.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: yen:YE0494 ornithine carbamoyltransferase chain I; ornithine carbamoyltransferase 614286 5606732 Spro_0554 Serratia proteamaculans 568 ornithine carbamoyltransferase YP_001476788.1 613267 R 399741 CDS YP_001476789.1 157368800 5606733 614450..614878 1 NC_009832.1 PFAM: protein of unknown function DUF1260; KEGG: yen:YE0495 hypothetical protein; hypothetical protein 614878 5606733 Spro_0555 Serratia proteamaculans 568 hypothetical protein YP_001476789.1 614450 D 399741 CDS YP_001476790.1 157368801 5606728 614934..615698 1 NC_009832.1 PFAM: tRNA--hydroxylase; KEGG: ent:Ent638_0461 tRNA--hydroxylase; tRNA--hydroxylase 615698 5606728 Spro_0556 Serratia proteamaculans 568 tRNA--hydroxylase YP_001476790.1 614934 D 399741 CDS YP_001476791.1 157368802 5606729 complement(615720..617327) 1 NC_009832.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bte:BTH_II0331 GMC oxidoreductase; glucose-methanol-choline oxidoreductase 617327 5606729 Spro_0557 Serratia proteamaculans 568 glucose-methanol-choline oxidoreductase YP_001476791.1 615720 R 399741 CDS YP_001476792.1 157368803 5606714 617680..618687 1 NC_009832.1 PFAM: acyltransferase 3; KEGG: apl:APL_1465 hypothetical protein; acyltransferase 3 618687 5606714 Spro_0558 Serratia proteamaculans 568 acyltransferase 3 YP_001476792.1 617680 D 399741 CDS YP_001476793.1 157368804 5606715 complement(618845..619378) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypp:YPDSF_3254 acetyltransferase; GCN5-like N-acetyltransferase 619378 5606715 Spro_0559 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001476793.1 618845 R 399741 CDS YP_001476794.1 157368805 5606716 complement(619545..622421) 1 NC_009832.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 622421 valS 5606716 valS Serratia proteamaculans 568 valyl-tRNA synthetase YP_001476794.1 619545 R 399741 CDS YP_001476795.1 157368806 5606705 complement(622435..622884) 1 NC_009832.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 622884 5606705 Spro_0561 Serratia proteamaculans 568 DNA polymerase III subunit chi YP_001476795.1 622435 R 399741 CDS YP_001476796.1 157368807 5606706 complement(622969..624480) 1 NC_009832.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 624480 5606706 Spro_0562 Serratia proteamaculans 568 leucyl aminopeptidase YP_001476796.1 622969 R 399741 CDS YP_001476797.1 157368808 5606707 624761..625855 1 NC_009832.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ypi:YpsIP31758_3542 putative permease; permease YjgP/YjgQ family protein 625855 5606707 Spro_0563 Serratia proteamaculans 568 permease YjgP/YjgQ family protein YP_001476797.1 624761 D 399741 CDS YP_001476798.1 157368809 5606680 625855..626925 1 NC_009832.1 PFAM: permease YjgP/YjgQ family protein; KEGG: yen:YE0502 hypothetical protein; permease YjgP/YjgQ family protein 626925 5606680 Spro_0564 Serratia proteamaculans 568 permease YjgP/YjgQ family protein YP_001476798.1 625855 D 399741 CDS YP_001476799.1 157368810 5607204 627797..628873 1 NC_009832.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: shn:Shewana3_2962 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein Fic 628873 5607204 Spro_0565 Serratia proteamaculans 568 filamentation induced by cAMP protein Fic YP_001476799.1 627797 D 399741 CDS YP_001476800.1 157368811 5606682 629129..629764 1 NC_009832.1 PFAM: carbonic anhydrase; KEGG: kpn:KPN_02014 putative carbonic anhydrase; carbonate dehydratase 629764 5606682 Spro_0566 Serratia proteamaculans 568 carbonate dehydratase YP_001476800.1 629129 D 399741 CDS YP_001476801.1 157368812 5606651 629991..630239 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: ent:Ent638_2034 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 630239 5606651 Spro_0567 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001476801.1 629991 D 399741 CDS YP_001476802.1 157368813 5606652 630242..630592 1 NC_009832.1 KEGG: kpn:KPN_04693 hypothetical protein; hypothetical protein 630592 5606652 Spro_0568 Serratia proteamaculans 568 hypothetical protein YP_001476802.1 630242 D 399741 CDS YP_001476803.1 157368814 5606653 complement(630641..631708) 1 NC_009832.1 response regulator receiver protein 631708 5606653 Spro_0569 Serratia proteamaculans 568 response regulator receiver protein YP_001476803.1 630641 R 399741 CDS YP_001476804.1 157368815 5606643 complement(631710..633872) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; KEGG: azo:azo0358 putative two-component sensor kinase; ATPase domain-containing protein 633872 5606643 Spro_0570 Serratia proteamaculans 568 ATPase domain-containing protein YP_001476804.1 631710 R 399741 CDS YP_001476805.1 157368816 5606644 complement(634208..635422) 1 NC_009832.1 PFAM: Restriction endonuclease EcoRII; KEGG: acr:Acry_3581 hypothetical protein; Type II site-specific deoxyribonuclease 635422 5606644 Spro_0571 Serratia proteamaculans 568 Type II site-specific deoxyribonuclease YP_001476805.1 634208 R 399741 CDS YP_001476806.1 157368817 5606640 complement(635584..636057) 1 NC_009832.1 PFAM: DNA mismatch endonuclease vsr; KEGG: plu:plu0339 very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) (V.EcoKDcm); DNA mismatch endonuclease vsr 636057 5606640 Spro_0572 Serratia proteamaculans 568 DNA mismatch endonuclease vsr YP_001476806.1 635584 R 399741 CDS YP_001476807.1 157368818 5606641 complement(636066..637541) 1 NC_009832.1 KEGG: plu:plu0338 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA cytosine methylase 637541 5606641 Spro_0573 Serratia proteamaculans 568 DNA cytosine methylase YP_001476807.1 636066 R 399741 CDS YP_001476808.1 157368819 5606642 complement(637675..638016) 1 NC_009832.1 KEGG: eca:ECA0128 hypothetical protein; hypothetical protein 638016 5606642 Spro_0574 Serratia proteamaculans 568 hypothetical protein YP_001476808.1 637675 R 399741 CDS YP_001476809.1 157368820 5606637 complement(638360..639790) 1 NC_009832.1 PFAM: glycoside hydrolase family 1; KEGG: sdy:SDY_2912 6-phospho-beta-glucosidase; cryptic 6-phospho-beta-glucosidase 639790 5606637 Spro_0575 Serratia proteamaculans 568 cryptic 6-phospho-beta-glucosidase YP_001476809.1 638360 R 399741 CDS YP_001476810.1 157368821 5606638 complement(639807..641249) 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC 641249 5606638 Spro_0576 Serratia proteamaculans 568 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC YP_001476810.1 639807 R 399741 CDS YP_001476811.1 157368822 5606639 641536..642570 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ent:Ent638_3187 regulatory protein, LacI; LacI family transcription regulator 642570 5606639 Spro_0577 Serratia proteamaculans 568 LacI family transcription regulator YP_001476811.1 641536 D 399741 CDS YP_001476812.1 157368823 5606574 complement(642567..643334) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: mmw:Mmwyl1_0262 transcriptional regulator, AraC family; AraC family transcriptional regulator 643334 5606574 Spro_0578 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476812.1 642567 R 399741 CDS YP_001476813.1 157368824 5606575 643439..644626 1 NC_009832.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mmw:Mmwyl1_0263 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 644626 5606575 Spro_0579 Serratia proteamaculans 568 Bcr/CflA subfamily drug resistance transporter YP_001476813.1 643439 D 399741 CDS YP_001476814.1 157368825 5606576 complement(644582..645544) 1 NC_009832.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eca:ECA1189 hypothetical protein; putative GTP-binding protein YjiA 645544 5606576 Spro_0580 Serratia proteamaculans 568 putative GTP-binding protein YjiA YP_001476814.1 644582 R 399741 CDS YP_001476815.1 157368826 5606569 complement(645557..645760) 1 NC_009832.1 PFAM: protein of unknown function DUF466; KEGG: eca:ECA1188 hypothetical protein; hypothetical protein 645760 5606569 Spro_0581 Serratia proteamaculans 568 hypothetical protein YP_001476815.1 645557 R 399741 CDS YP_001476816.1 157368827 5606570 complement(645827..648007) 1 NC_009832.1 PFAM: carbon starvation protein CstA; KEGG: eca:ECA1187 putative carbon starvation protein; carbon starvation protein CstA 648007 5606570 Spro_0582 Serratia proteamaculans 568 carbon starvation protein CstA YP_001476816.1 645827 R 399741 CDS YP_001476817.1 157368828 5606571 complement(648308..648955) 1 NC_009832.1 PFAM: glycosyl transferase family 20; KEGG: pol:Bpro_3918 alpha,alpha-trehalose-phosphate synthase; glycosyl transferase family protein 648955 5606571 Spro_0583 Serratia proteamaculans 568 glycosyl transferase family protein YP_001476817.1 648308 R 399741 CDS YP_001476818.1 157368829 5606542 complement(649019..650416) 1 NC_009832.1 PFAM: glutamine synthetase catalytic region; KEGG: kpn:KPN_01021 putative glutamine synthetase; glutamine synthetase catalytic region 650416 5606542 Spro_0584 Serratia proteamaculans 568 glutamine synthetase catalytic region YP_001476818.1 649019 R 399741 CDS YP_001476819.1 157368830 5606543 650587..650922 1 NC_009832.1 KEGG: pap:PSPA7_2489 hypothetical protein; hypothetical protein 650922 5606543 Spro_0585 Serratia proteamaculans 568 hypothetical protein YP_001476819.1 650587 D 399741 CDS YP_001476820.1 157368831 5606004 complement(651091..652167) 1 NC_009832.1 KEGG: kpn:KPN_01908 putative receptor; putative receptor 652167 5606004 Spro_0586 Serratia proteamaculans 568 putative receptor YP_001476820.1 651091 R 399741 CDS YP_001476821.1 157368832 5606005 complement(652513..652908) 1 NC_009832.1 hypothetical protein 652908 5606005 Spro_0587 Serratia proteamaculans 568 hypothetical protein YP_001476821.1 652513 R 399741 CDS YP_001476822.1 157368833 5606006 complement(653275..653700) 1 NC_009832.1 KEGG: stt:t4360 hypothetical protein; hypothetical protein 653700 5606006 Spro_0588 Serratia proteamaculans 568 hypothetical protein YP_001476822.1 653275 R 399741 CDS YP_001476823.1 157368834 5606464 complement(653756..654649) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02052 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 654649 5606464 Spro_0589 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476823.1 653756 R 399741 CDS YP_001476824.1 157368835 5606465 654825..655523 1 NC_009832.1 KEGG: pap:PSPA7_3295 probable CoA transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 655523 5606465 Spro_0590 Serratia proteamaculans 568 3-oxoacid CoA-transferase subunit A YP_001476824.1 654825 D 399741 CDS YP_001476825.1 157368836 5606466 655534..656187 1 NC_009832.1 KEGG: pap:PSPA7_3294 probable CoA transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 656187 5606466 Spro_0591 Serratia proteamaculans 568 3-oxoacid CoA-transferase subunit B YP_001476825.1 655534 D 399741 CDS YP_001476826.1 157368837 5606455 656187..657392 1 NC_009832.1 KEGG: ppu:PP_4636 beta-ketothiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 657392 5606455 Spro_0592 Serratia proteamaculans 568 acetyl-CoA acetyltransferase YP_001476826.1 656187 D 399741 CDS YP_001476827.1 157368838 5606456 657409..658332 1 NC_009832.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: kpn:KPN_02056 3-hydroxybutyryl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 658332 5606456 Spro_0593 Serratia proteamaculans 568 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001476827.1 657409 D 399741 CDS YP_001476828.1 157368839 5606457 658408..659799 1 NC_009832.1 PFAM: Citrate transporter; KEGG: pfl:PFL_3575 hypothetical protein; citrate transporter 659799 5606457 Spro_0594 Serratia proteamaculans 568 citrate transporter YP_001476828.1 658408 D 399741 CDS YP_001476829.1 157368840 5606142 659812..660582 1 NC_009832.1 catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase 660582 5606142 Spro_0595 Serratia proteamaculans 568 3-hydroxybutyrate dehydrogenase YP_001476829.1 659812 D 399741 CDS YP_001476830.1 157368841 5606143 complement(660603..661457) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_3814 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 661457 5606143 Spro_0596 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476830.1 660603 R 399741 CDS YP_001476831.1 157368842 5606144 661544..662422 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: yen:YE0593 putative right origin-binding protein; AraC family transcriptional regulator 662422 5606144 Spro_0597 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476831.1 661544 D 399741 CDS YP_001476832.1 157368843 5602915 662589..663509 1 NC_009832.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sgl:SG1042 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 663509 5602915 Spro_0598 Serratia proteamaculans 568 ErfK/YbiS/YcfS/YnhG family protein YP_001476832.1 662589 D 399741 CDS YP_001476833.1 157368844 5602916 663927..664883 1 NC_009832.1 PFAM: putative transposase YhgA family protein; KEGG: stm:PSLT051 putative cytoplasmic protein; putative transposase YhgA family protein 664883 5602916 Spro_0599 Serratia proteamaculans 568 putative transposase YhgA family protein YP_001476833.1 663927 D 399741 CDS YP_001476834.1 157368845 5606345 665181..665588 1 NC_009832.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: eca:ECA0929 biopolymer transport protein; biopolymer transport protein ExbD/TolR 665588 5606345 Spro_0600 Serratia proteamaculans 568 biopolymer transport protein ExbD/TolR YP_001476834.1 665181 D 399741 CDS YP_001476835.1 157368846 5606346 665590..666336 1 NC_009832.1 TIGRFAM: TonB family protein; KEGG: eca:ECA0928 TonB-like protein; TonB family protein 666336 5606346 Spro_0601 Serratia proteamaculans 568 TonB family protein YP_001476835.1 665590 D 399741 CDS YP_001476836.1 157368847 5606347 666376..668619 1 NC_009832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: eca:ECA0927 TonB-dependent receptor; TonB-dependent receptor 668619 5606347 Spro_0602 Serratia proteamaculans 568 TonB-dependent receptor YP_001476836.1 666376 D 399741 CDS YP_001476837.1 157368848 5606313 668636..669289 1 NC_009832.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: eca:ECA0926 putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 669289 5606313 Spro_0603 Serratia proteamaculans 568 MotA/TolQ/ExbB proton channel YP_001476837.1 668636 D 399741 CDS YP_001476838.1 157368849 5606314 669282..670532 1 NC_009832.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: eca:ECA0925 putative phospholipase; phospholipase D/transphosphatidylase 670532 5606314 Spro_0604 Serratia proteamaculans 568 phospholipase D/transphosphatidylase YP_001476838.1 669282 D 399741 CDS YP_001476839.1 157368850 5606315 complement(670567..671676) 1 NC_009832.1 PFAM: peptidase S58 DmpA; KEGG: pfo:Pfl_3533 peptidase S58, DmpA; peptidase S58 DmpA 671676 5606315 Spro_0605 Serratia proteamaculans 568 peptidase S58 DmpA YP_001476839.1 670567 R 399741 CDS YP_001476840.1 157368851 5606045 complement(671793..673301) 1 NC_009832.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: aav:Aave_4746 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 673301 5606045 Spro_0606 Serratia proteamaculans 568 methylmalonate-semialdehyde dehydrogenase YP_001476840.1 671793 R 399741 CDS YP_001476841.1 157368852 5606046 complement(673317..674657) 1 NC_009832.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 674657 5606046 Spro_0607 Serratia proteamaculans 568 beta alanine--pyruvate transaminase YP_001476841.1 673317 R 399741 CDS YP_001476842.1 157368853 5606047 674788..675717 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_0374 transcriptional regulator, LysR family; LysR family transcriptional regulator 675717 5606047 Spro_0608 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476842.1 674788 D 399741 CDS YP_001476843.1 157368854 5606304 675866..676144 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 676144 5606304 Spro_0609 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001476843.1 675866 D 399741 CDS YP_001476844.1 157368855 5606305 676165..677016 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 677016 5606305 Spro_0610 Serratia proteamaculans 568 Integrase catalytic subunit YP_001476844.1 676165 D 399741 CDS YP_001476845.1 157368856 5606306 complement(677089..678216) 1 NC_009832.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cte:CT0951 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 678216 5606306 Spro_0611 Serratia proteamaculans 568 iron-containing alcohol dehydrogenase YP_001476845.1 677089 R 399741 CDS YP_001476846.1 157368857 5606275 678483..679241 1 NC_009832.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: plu:plu4288 hypothetical protein; LuxR family transcriptional regulator 679241 5606275 Spro_0612 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476846.1 678483 D 399741 CDS YP_001476847.1 157368858 5606276 679278..680642 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; KEGG: plu:plu4287 unnamed protein product; highly similar to probable oxidoreductase; FAD dependent oxidoreductase 680642 5606276 Spro_0613 Serratia proteamaculans 568 FAD dependent oxidoreductase YP_001476847.1 679278 D 399741 CDS YP_001476848.1 157368859 5606201 680664..681029 1 NC_009832.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: plu:plu4286 hypothetical protein; hypothetical protein 681029 5606201 Spro_0614 Serratia proteamaculans 568 hypothetical protein YP_001476848.1 680664 D 399741 CDS YP_001476849.1 157368860 5606202 complement(681067..681873) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO6966 lipase; alpha/beta hydrolase fold domain-containing protein 681873 5606202 Spro_0615 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001476849.1 681067 R 399741 CDS YP_001476850.1 157368861 5606203 complement(681963..683075) 1 NC_009832.1 PFAM: histone deacetylase superfamily; KEGG: kpn:KPN_00530 putative deacetylase; histone deacetylase superfamily protein 683075 5606203 Spro_0616 Serratia proteamaculans 568 histone deacetylase superfamily protein YP_001476850.1 681963 R 399741 CDS YP_001476851.1 157368862 5606177 complement(683089..684261) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_15270 putative permease; major facilitator transporter 684261 5606177 Spro_0617 Serratia proteamaculans 568 major facilitator transporter YP_001476851.1 683089 R 399741 CDS YP_001476852.1 157368863 5606178 complement(684402..685049) 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: plu:plu4274 hypothetical protein; LuxR family transcriptional regulator 685049 5606178 Spro_0618 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001476852.1 684402 R 399741 CDS YP_001476853.1 157368864 5606179 685816..687309 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: plu:plu4273 hypothetical protein; amino acid permease-associated protein 687309 5606179 Spro_0619 Serratia proteamaculans 568 amino acid permease-associated protein YP_001476853.1 685816 D 399741 CDS YP_001476854.1 157368865 5606171 687284..687871 1 NC_009832.1 KEGG: plu:plu4272 hypothetical protein; hypothetical protein 687871 5606171 Spro_0620 Serratia proteamaculans 568 hypothetical protein YP_001476854.1 687284 D 399741 CDS YP_001476855.1 157368866 5606172 687864..688646 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_00526 putative 3-ketoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 688646 5606172 Spro_0621 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476855.1 687864 D 399741 CDS YP_001476856.1 157368867 5606173 688657..689454 1 NC_009832.1 KEGG: bpm:BURPS1710b_A2463 MoaF; MoaF 689454 5606173 Spro_0622 Serratia proteamaculans 568 MoaF YP_001476856.1 688657 D 399741 CDS YP_001476857.1 157368868 5605851 689459..690241 1 NC_009832.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 690241 5605851 Spro_0623 Serratia proteamaculans 568 3-ketoacyl-(acyl-carrier-protein) reductase YP_001476857.1 689459 D 399741 CDS YP_001476858.1 157368869 5605852 complement(690291..690746) 1 NC_009832.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: plu:plu0991 homoprotocatechuate degradation operon regulator; MarR family transcriptional regulator 690746 5605852 Spro_0624 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001476858.1 690291 R 399741 CDS YP_001476859.1 157368870 5605853 691072..691704 1 NC_009832.1 KEGG: plu:plu0990 hypothetical protein; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 691704 5605853 Spro_0625 Serratia proteamaculans 568 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 YP_001476859.1 691072 D 399741 CDS YP_001476860.1 157368871 5606080 691701..692465 1 NC_009832.1 KEGG: plu:plu0989 similar to C-terminal region of 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (HHDD isomerase); 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase (OPET decarboxylase)]; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 692465 5606080 Spro_0626 Serratia proteamaculans 568 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 YP_001476860.1 691701 D 399741 CDS YP_001476861.1 157368872 5606081 692462..693916 1 NC_009832.1 TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_04787 4-hydroxyphenylacetate catabolism; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 693916 5606081 Spro_0627 Serratia proteamaculans 568 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_001476861.1 692462 D 399741 CDS YP_001476862.1 157368873 5606074 693926..694783 1 NC_009832.1 KEGG: kpn:KPN_04786 4-hydroxyphenylacetate catabolism; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 694783 5606074 Spro_0628 Serratia proteamaculans 568 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_001476862.1 693926 D 399741 CDS YP_001476863.1 157368874 5606075 694793..695179 1 NC_009832.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: plu:plu0986 5-carboxymethyl-2-hydroxy-muconic acid isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 695179 5606075 Spro_0629 Serratia proteamaculans 568 5-carboxymethyl-2-hydroxymuconate isomerase YP_001476863.1 694793 D 399741 CDS YP_001476864.1 157368875 5606076 695190..695993 1 NC_009832.1 KEGG: ssn:SSON_4495 2-oxo-hept-3-ene-1,7-dioate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Hydratase/decarboxylase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 695993 5606076 Spro_0630 Serratia proteamaculans 568 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_001476864.1 695190 D 399741 CDS YP_001476865.1 157368876 5606062 696210..697004 1 NC_009832.1 KEGG: ssn:SSON_4494 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (HHED aldolase); TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 697004 5606062 Spro_0631 Serratia proteamaculans 568 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_001476865.1 696210 D 399741 CDS YP_001476866.1 157368877 5606063 697035..698405 1 NC_009832.1 TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_4406 putative 4-hydroxyphenylacetate permease; 4-hydroxyphenylacetate transporter 698405 5606063 Spro_0632 Serratia proteamaculans 568 4-hydroxyphenylacetate transporter YP_001476866.1 697035 D 399741 CDS YP_001476867.1 157368878 5606064 698465..699361 1 NC_009832.1 TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: kpn:KPN_04781 4-hydroxyphenylacetate catabolism; AraC family transcriptional regulator 699361 5606064 Spro_0633 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476867.1 698465 D 399741 CDS YP_001476868.1 157368879 5606053 699541..701103 1 NC_009832.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: stm:STM1099 4-hydroxyphenylacetate catabolism; 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit 701103 5606053 Spro_0634 Serratia proteamaculans 568 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit YP_001476868.1 699541 D 399741 CDS YP_001476869.1 157368880 5606054 701121..701636 1 NC_009832.1 TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; KEGG: plu:plu0974 4-hydroxyphenylacetic acid hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 701636 5606054 Spro_0635 Serratia proteamaculans 568 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit YP_001476869.1 701121 D 399741 CDS YP_001476870.1 157368881 5606055 complement(701674..702816) 1 NC_009832.1 this protein has no known enzymatic function; beta-lactam binding protein AmpH 702816 5606055 Spro_0636 Serratia proteamaculans 568 beta-lactam binding protein AmpH YP_001476870.1 701674 R 399741 CDS YP_001476871.1 157368882 5606042 complement(702978..703736) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_3378 GntR domain protein; GntR domain-containing protein 703736 5606042 Spro_0637 Serratia proteamaculans 568 GntR domain-containing protein YP_001476871.1 702978 R 399741 CDS YP_001476872.1 157368883 5606043 703972..704712 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2412 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 704712 5606043 Spro_0638 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476872.1 703972 D 399741 CDS YP_001476873.1 157368884 5606044 704747..705592 1 NC_009832.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ypi:YpsIP31758_2411 fumarylacetoacetate hydrolase family protein; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 705592 5606044 Spro_0639 Serratia proteamaculans 568 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001476873.1 704747 D 399741 CDS YP_001476874.1 157368885 5606020 705606..706883 1 NC_009832.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ypi:YpsIP31758_2410 mandelate racemase/muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 706883 5606020 Spro_0640 Serratia proteamaculans 568 mandelate racemase/muconate lactonizing protein YP_001476874.1 705606 D 399741 CDS YP_001476875.1 157368886 5606021 706898..707761 1 NC_009832.1 PFAM: amidohydrolase 2; KEGG: bvi:Bcep1808_3379 amidohydrolase 2; amidohydrolase 2 707761 5606021 Spro_0641 Serratia proteamaculans 568 amidohydrolase 2 YP_001476875.1 706898 D 399741 CDS YP_001476876.1 157368887 5605886 707739..708515 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bvi:Bcep1808_3383 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 708515 5605886 Spro_0642 Serratia proteamaculans 568 short chain dehydrogenase YP_001476876.1 707739 D 399741 CDS YP_001476877.1 157368888 5605887 708512..708871 1 NC_009832.1 KEGG: rfr:Rfer_3138 hypothetical protein; hypothetical protein 708871 5605887 Spro_0643 Serratia proteamaculans 568 hypothetical protein YP_001476877.1 708512 D 399741 CDS YP_001476878.1 157368889 5605888 708895..710124 1 NC_009832.1 TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: cff:CFF8240_1066 L-fucose:H+ symporter permease; L-fucose transporter 710124 5605888 Spro_0644 Serratia proteamaculans 568 L-fucose transporter YP_001476878.1 708895 D 399741 CDS YP_001476879.1 157368890 5605812 complement(710142..711215) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE0557 HmsT protein; diguanylate cyclase 711215 5605812 Spro_0645 Serratia proteamaculans 568 diguanylate cyclase YP_001476879.1 710142 R 399741 CDS YP_001476880.1 157368891 5605813 711479..711763 1 NC_009832.1 PFAM: protein of unknown function DUF1435; KEGG: eca:ECA0738 hypothetical protein; hypothetical protein 711763 5605813 Spro_0646 Serratia proteamaculans 568 hypothetical protein YP_001476880.1 711479 D 399741 CDS YP_001476881.1 157368892 5606730 complement(712258..713202) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0559 LysR-family regulatory protein; LysR family transcriptional regulator 713202 5606730 Spro_0647 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476881.1 712258 R 399741 CDS YP_001476882.1 157368893 5605797 713333..714325 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: eca:ECA0736 putative aldo/keto reductase; aldo/keto reductase 714325 5605797 Spro_0648 Serratia proteamaculans 568 aldo/keto reductase YP_001476882.1 713333 D 399741 CDS YP_001476883.1 157368894 5605798 complement(714386..715429) 1 NC_009832.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 715429 rsmC 5605798 rsmC Serratia proteamaculans 568 16S ribosomal RNA m2G1207 methyltransferase YP_001476883.1 714386 R 399741 CDS YP_001476884.1 157368895 5605799 715586..716023 1 NC_009832.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 716023 5605799 Spro_0650 Serratia proteamaculans 568 DNA polymerase III subunit psi YP_001476884.1 715586 D 399741 CDS YP_001476885.1 157368896 5605778 715968..716411 1 NC_009832.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 716411 rimI 5605778 rimI Serratia proteamaculans 568 ribosomal-protein-alanine N-acetyltransferase YP_001476885.1 715968 D 399741 CDS YP_001476886.1 157368897 5605779 716580..718169 1 NC_009832.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 718169 prfC 5605779 prfC Serratia proteamaculans 568 peptide chain release factor 3 YP_001476886.1 716580 D 399741 CDS YP_001476887.1 157368898 5605780 718704..719318 1 NC_009832.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ypi:YpsIP31758_3503 osmotically induced periplasmic protein OsmY; periplasmic protein 719318 5605780 Spro_0653 Serratia proteamaculans 568 periplasmic protein YP_001476887.1 718704 D 399741 CDS YP_001476888.1 157368899 5605749 719380..719637 1 NC_009832.1 PFAM: protein of unknown function DUF1328; KEGG: kpn:KPN_04833 putative amino acid/amine transport protein; hypothetical protein 719637 5605749 Spro_0654 Serratia proteamaculans 568 hypothetical protein YP_001476888.1 719380 D 399741 CDS YP_001476889.1 157368900 5605750 719696..719881 1 NC_009832.1 KEGG: eca:ECA0471 hypothetical protein; hypothetical protein 719881 5605750 Spro_0655 Serratia proteamaculans 568 hypothetical protein YP_001476889.1 719696 D 399741 CDS YP_001476890.1 157368901 5605746 719892..721013 1 NC_009832.1 PFAM: Patatin; KEGG: yen:YE0567 hypothetical protein; patatin 721013 5605746 Spro_0656 Serratia proteamaculans 568 patatin YP_001476890.1 719892 D 399741 CDS YP_001476891.1 157368902 5605747 721013..721786 1 NC_009832.1 PFAM: TatD-related deoxyribonuclease; KEGG: ypp:YPDSF_3199 metalloenzyme; TatD-related deoxyribonuclease 721786 5605747 Spro_0657 Serratia proteamaculans 568 TatD-related deoxyribonuclease YP_001476891.1 721013 D 399741 CDS YP_001476892.1 157368903 5605748 722150..723703 1 NC_009832.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: ecv:APECO1_2528 hypothetical protein; 5'-nucleotidase domain-containing protein 723703 5605748 Spro_0658 Serratia proteamaculans 568 5'-nucleotidase domain-containing protein YP_001476892.1 722150 D 399741 CDS YP_001476893.1 157368904 5605712 723924..725201 1 NC_009832.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: ypm:YP_3746 putative Na+ dependent nucleosidetransporter-family protein; nucleoside transporter 725201 5605712 Spro_0659 Serratia proteamaculans 568 nucleoside transporter YP_001476893.1 723924 D 399741 CDS YP_001476894.1 157368905 5605713 725574..726353 1 NC_009832.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 726353 5605713 Spro_0660 Serratia proteamaculans 568 deoxyribose-phosphate aldolase YP_001476894.1 725574 D 399741 CDS YP_001476895.1 157368906 5605714 726423..727745 1 NC_009832.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 727745 deoA 5605714 deoA Serratia proteamaculans 568 thymidine phosphorylase YP_001476895.1 726423 D 399741 CDS YP_001476896.1 157368907 5605688 727815..729038 1 NC_009832.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 729038 5605688 Spro_0662 Serratia proteamaculans 568 phosphopentomutase YP_001476896.1 727815 D 399741 CDS YP_001476897.1 157368908 5605689 729110..729841 1 NC_009832.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: yen:YE0574 purine nucleoside phosphorylase; purine nucleoside phosphorylase 729841 5605689 Spro_0663 Serratia proteamaculans 568 purine nucleoside phosphorylase YP_001476897.1 729110 D 399741 CDS YP_001476898.1 157368909 5605690 729982..731325 1 NC_009832.1 PFAM: HipA domain protein; KEGG: yen:YE0575 putative DNA-binding protein; hypothetical protein 731325 5605690 Spro_0664 Serratia proteamaculans 568 hypothetical protein YP_001476898.1 729982 D 399741 CDS YP_001476899.1 157368910 5605679 complement(731322..732026) 1 NC_009832.1 KEGG: yps:YPTB0585 membrane protein, transcribed divergently from SerB; hypothetical protein 732026 5605679 Spro_0665 Serratia proteamaculans 568 hypothetical protein YP_001476899.1 731322 R 399741 CDS YP_001476900.1 157368911 5605680 732131..733108 1 NC_009832.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 733108 serB 5605680 serB Serratia proteamaculans 568 phosphoserine phosphatase YP_001476900.1 732131 D 399741 CDS YP_001476901.1 157368912 5605681 733171..734556 1 NC_009832.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 734556 5605681 Spro_0667 Serratia proteamaculans 568 DNA repair protein RadA YP_001476901.1 733171 D 399741 CDS YP_001476902.1 157368913 5605660 734613..735872 1 NC_009832.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 735872 5605660 Spro_0668 Serratia proteamaculans 568 nicotinamide-nucleotide adenylyltransferase YP_001476902.1 734613 D 399741 CDS YP_001476903.1 157368914 5605661 complement(735909..736910) 1 NC_009832.1 TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE0581 putative oxidoreductase; zinc-binding alcohol dehydrogenase 736910 5605661 Spro_0669 Serratia proteamaculans 568 zinc-binding alcohol dehydrogenase YP_001476903.1 735909 R 399741 CDS YP_001476904.1 157368915 5605643 737009..737920 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0582 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 737920 5605643 Spro_0670 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476904.1 737009 D 399741 CDS YP_001476905.1 157368916 5605644 complement(738101..739768) 1 NC_009832.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 739768 5605644 Spro_0671 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YP_001476905.1 738101 R 399741 CDS YP_001476906.1 157368917 5605645 complement(739909..740406) 1 NC_009832.1 PFAM: OmpA/MotB domain protein; KEGG: ypi:YpsIP31758_3488 OmpA family protein; OmpA/MotB domain-containing protein 740406 5605645 Spro_0672 Serratia proteamaculans 568 OmpA/MotB domain-containing protein YP_001476906.1 739909 R 399741 CDS YP_001476907.1 157368918 5605640 complement(740443..741690) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: yen:YE0586 hypothetical protein; diguanylate cyclase 741690 5605640 Spro_0673 Serratia proteamaculans 568 diguanylate cyclase YP_001476907.1 740443 R 399741 CDS YP_001476908.1 157368919 5605641 complement(741687..742301) 1 NC_009832.1 KEGG: yen:YE0587 hypothetical protein; hypothetical protein 742301 5605641 Spro_0674 Serratia proteamaculans 568 hypothetical protein YP_001476908.1 741687 R 399741 CDS YP_001476909.1 157368920 5605642 743047..744975 1 NC_009832.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 744975 5605642 Spro_0675 Serratia proteamaculans 568 lytic murein transglycosylase YP_001476909.1 743047 D 399741 CDS YP_001476910.1 157368921 5605631 745031..745360 1 NC_009832.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 745360 5605631 Spro_0676 Serratia proteamaculans 568 Trp operon repressor YP_001476910.1 745031 D 399741 CDS YP_001476911.1 157368922 5605632 complement(745379..745918) 1 NC_009832.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 745918 5605632 Spro_0677 Serratia proteamaculans 568 NTPase YP_001476911.1 745379 R 399741 CDS YP_001476912.1 157368923 5605633 746030..746677 1 NC_009832.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 746677 5605633 Spro_0678 Serratia proteamaculans 568 phosphoglycerate mutase YP_001476912.1 746030 D 399741 CDS YP_001476913.1 157368924 5605619 complement(746674..747543) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: yen:YE0593 putative right origin-binding protein; AraC family transcriptional regulator 747543 5605619 Spro_0679 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001476913.1 746674 R 399741 CDS YP_001476914.1 157368925 5605620 747885..748364 1 NC_009832.1 PFAM: CreA family protein; KEGG: ypi:YpsIP31758_3479 CreA protein; hypothetical protein 748364 5605620 Spro_0680 Serratia proteamaculans 568 hypothetical protein YP_001476914.1 747885 D 399741 CDS YP_001476915.1 157368926 5605621 complement(748413..749129) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE0595 aerobic respiration control protein; two-component response regulator 749129 5605621 Spro_0681 Serratia proteamaculans 568 two-component response regulator YP_001476915.1 748413 R 399741 CDS YP_001476916.1 157368927 5605617 749763..750449 1 NC_009832.1 member of the SPOUT superfamily of methyltransferases; putative RNA methyltransferase 750449 5605617 Spro_0682 Serratia proteamaculans 568 putative RNA methyltransferase YP_001476916.1 749763 D 399741 CDS YP_001476917.1 157368928 5605618 750813..753272 1 NC_009832.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 753272 thrA 5605618 thrA Serratia proteamaculans 568 bifunctional aspartokinase I/homoserine dehydrogenase I YP_001476917.1 750813 D 399741 CDS YP_001476918.1 157368929 5605602 753274..754203 1 NC_009832.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 754203 5605602 Spro_0684 Serratia proteamaculans 568 homoserine kinase YP_001476918.1 753274 D 399741 CDS YP_001476919.1 157368930 5605603 754207..755496 1 NC_009832.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 755496 5605603 Spro_0685 Serratia proteamaculans 568 threonine synthase YP_001476919.1 754207 D 399741 CDS YP_001476920.1 157368931 5605604 complement(755711..756484) 1 NC_009832.1 PFAM: protein of unknown function DUF328; KEGG: yen:YE0603 hypothetical protein; hypothetical protein 756484 5605604 Spro_0686 Serratia proteamaculans 568 hypothetical protein YP_001476920.1 755711 R 399741 CDS YP_001476921.1 157368932 5605569 complement(756589..758013) 1 NC_009832.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: plu:plu2791 unnamed protein product; highly similar to probable amino acid transport protein YaaJ, sodium-dependent of Escherichia coli; amino acid carrier protein 758013 5605569 Spro_0687 Serratia proteamaculans 568 amino acid carrier protein YP_001476921.1 756589 R 399741 CDS YP_001476922.1 157368933 5605570 758395..759348 1 NC_009832.1 KEGG: yen:YE0604 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 759348 5605570 Spro_0688 Serratia proteamaculans 568 transaldolase B YP_001476922.1 758395 D 399741 CDS YP_001476923.1 157368934 5605571 759499..760086 1 NC_009832.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 760086 mogA 5605571 mogA Serratia proteamaculans 568 molybdenum cofactor biosynthesis protein MogA YP_001476923.1 759499 D 399741 CDS YP_001476924.1 157368935 5605566 760211..761518 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE0606 putative transport protein; major facilitator transporter 761518 5605566 Spro_0690 Serratia proteamaculans 568 major facilitator transporter YP_001476924.1 760211 D 399741 CDS YP_001476925.1 157368936 5605567 complement(761571..762170) 1 NC_009832.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: yen:YE0608 hypothetical protein; hypothetical protein 762170 5605567 Spro_0691 Serratia proteamaculans 568 hypothetical protein YP_001476925.1 761571 R 399741 CDS YP_001476926.1 157368937 5605568 762495..764408 1 NC_009832.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 764408 dnaK 5605568 dnaK Serratia proteamaculans 568 molecular chaperone DnaK YP_001476926.1 762495 D 399741 CDS YP_001476927.1 157368938 5605534 764515..765642 1 NC_009832.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 765642 5605534 Spro_0693 Serratia proteamaculans 568 chaperone protein DnaJ YP_001476927.1 764515 D 399741 CDS YP_001476928.1 157368939 5605535 765849..767045 1 NC_009832.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 767045 nhaA 5605535 nhaA Serratia proteamaculans 568 pH-dependent sodium/proton antiporter YP_001476928.1 765849 D 399741 CDS YP_001476929.1 157368940 5605536 767251..768144 1 NC_009832.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 768144 nhaR 5605536 nhaR Serratia proteamaculans 568 transcriptional activator NhaR YP_001476929.1 767251 D 399741 CDS YP_001476930.1 157368941 5605529 complement(768214..768474) 1 NC_009832.1 PFAM: ribosomal protein S20; KEGG: eca:ECA3878 30S ribosomal protein S20; 30S ribosomal protein S20 768474 5605529 Spro_0696 Serratia proteamaculans 568 30S ribosomal protein S20 YP_001476930.1 768214 R 399741 CDS YP_001476931.1 157368942 5605530 768865..769803 1 NC_009832.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 769803 5605530 Spro_0697 Serratia proteamaculans 568 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001476931.1 768865 D 399741 CDS YP_001476932.1 157368943 5605478 769836..772652 1 NC_009832.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 772652 ileS 5605478 ileS Serratia proteamaculans 568 isoleucyl-tRNA synthetase YP_001476932.1 769836 D 399741 CDS YP_001476933.1 157368944 5605479 772652..773161 1 NC_009832.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 773161 lspA 5605479 lspA Serratia proteamaculans 568 lipoprotein signal peptidase YP_001476933.1 772652 D 399741 CDS YP_001476934.1 157368945 5605480 773163..773633 1 NC_009832.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ypp:YPDSF_3155 FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 773633 5605480 Spro_0700 Serratia proteamaculans 568 FKBP-type peptidylprolyl isomerase YP_001476934.1 773163 D 399741 CDS YP_001476935.1 157368946 5605464 773614..774567 1 NC_009832.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 774567 ispH 5605464 ispH Serratia proteamaculans 568 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001476935.1 773614 D 399741 CDS YP_001476936.1 157368947 5605465 complement(774875..775798) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_0810 transcriptional regulator, LysR family; LysR family transcriptional regulator 775798 5605465 Spro_0702 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001476936.1 774875 R 399741 CDS YP_001476937.1 157368948 5605466 776068..776955 1 NC_009832.1 PFAM: Pyoverdine biosynthesis protein; KEGG: eca:ECA3381 pyoverdine biosynthesis protein; pyoverdine biosynthesis protein 776955 5605466 Spro_0703 Serratia proteamaculans 568 pyoverdine biosynthesis protein YP_001476937.1 776068 D 399741 CDS YP_001476938.1 157368949 5605458 777046..777909 1 NC_009832.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: eca:ECA3380 pyoverdine biosynthesis protein; taurine catabolism dioxygenase TauD/TfdA 777909 5605458 Spro_0704 Serratia proteamaculans 568 taurine catabolism dioxygenase TauD/TfdA YP_001476938.1 777046 D 399741 CDS YP_001476939.1 157368950 5605459 777915..779186 1 NC_009832.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: glycosyl transferase family 28; KEGG: eca:ECA3379 putative glycosyltransferase; glycosyl transferase family protein 779186 5605459 Spro_0705 Serratia proteamaculans 568 glycosyl transferase family protein YP_001476939.1 777915 D 399741 CDS YP_001476940.1 157368951 5605460 complement(779240..780022) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A0545 putative short-chain dehydrogenase/reductase, FabG-like; short-chain dehydrogenase/reductase SDR 780022 5605460 Spro_0706 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001476940.1 779240 R 399741 CDS YP_001476941.1 157368952 5605284 complement(780048..780950) 1 NC_009832.1 PFAM: dihydrodipicolinate synthetase; KEGG: vvy:VVA1582 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 780950 5605284 Spro_0707 Serratia proteamaculans 568 dihydrodipicolinate synthetase YP_001476941.1 780048 R 399741 CDS YP_001476942.1 157368953 5605285 complement(780950..782662) 1 NC_009832.1 KEGG: vvy:VVA1581 putative dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 782662 5605285 Spro_0708 Serratia proteamaculans 568 dihydroxy-acid dehydratase YP_001476942.1 780950 R 399741 CDS YP_001476943.1 157368954 5605286 complement(782665..784053) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 probable permease transmembrane protein; major facilitator transporter 784053 5605286 Spro_0709 Serratia proteamaculans 568 major facilitator transporter YP_001476943.1 782665 R 399741 CDS YP_001476944.1 157368955 5605276 complement(784082..785512) 1 NC_009832.1 KEGG: ecs:ECs3819 galactose-proton symport of transport system; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 785512 5605276 Spro_0710 Serratia proteamaculans 568 sugar transporter YP_001476944.1 784082 R 399741 CDS YP_001476945.1 157368956 5605277 complement(785718..786449) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: vvy:VVA1573 hypothetical protein; GntR domain-containing protein 786449 5605277 Spro_0711 Serratia proteamaculans 568 GntR domain-containing protein YP_001476945.1 785718 R 399741 CDS YP_001476946.1 157368957 5605226 786770..787591 1 NC_009832.1 PFAM: dihydrodipicolinate reductase; KEGG: eca:ECA3872 dihydrodipicolinate reductase; dihydrodipicolinate reductase 787591 5605226 Spro_0712 Serratia proteamaculans 568 dihydrodipicolinate reductase YP_001476946.1 786770 D 399741 CDS YP_001476947.1 157368958 5605227 788062..789210 1 NC_009832.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 789210 5605227 Spro_0713 Serratia proteamaculans 568 carbamoyl phosphate synthase small subunit YP_001476947.1 788062 D 399741 CDS YP_001476948.1 157368959 5605228 789226..792450 1 NC_009832.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 792450 carB 5605228 carB Serratia proteamaculans 568 carbamoyl phosphate synthase large subunit YP_001476948.1 789226 D 399741 CDS YP_001476949.1 157368960 5605139 792631..793188 1 NC_009832.1 Required for full activity of KefC, a potassium-proton antiporter; glutathione-regulated potassium-efflux system ancillary protein KefF 793188 5605139 Spro_0715 Serratia proteamaculans 568 glutathione-regulated potassium-efflux system ancillary protein KefF YP_001476949.1 792631 D 399741 CDS YP_001476950.1 157368961 5605140 793181..795034 1 NC_009832.1 transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 795034 5605140 Spro_0716 Serratia proteamaculans 568 glutathione-regulated potassium-efflux system protein KefC YP_001476950.1 793181 D 399741 CDS YP_001476951.1 157368962 5605141 complement(795078..795692) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA3867 putative LysE-type translocator; lysine exporter protein LysE/YggA 795692 5605141 Spro_0717 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001476951.1 795078 R 399741 CDS YP_001476952.1 157368963 5605133 795821..796621 1 NC_009832.1 PFAM: protein of unknown function DUF1212; KEGG: yps:YPTB0626 putative transmembrane protein; hypothetical protein 796621 5605133 Spro_0718 Serratia proteamaculans 568 hypothetical protein YP_001476952.1 795821 D 399741 CDS YP_001476953.2 229593538 5605134 796612..797082 1 NC_009832.1 KEGG: ypi:YpsIP31758_3450 hypothetical protein; hypothetical protein 797082 5605134 Spro_0719 Serratia proteamaculans 568 hypothetical protein YP_001476953.2 796612 D 399741 CDS YP_001476954.1 157368965 5605135 797226..797708 1 NC_009832.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 797708 folA 5605135 folA Serratia proteamaculans 568 dihydrofolate reductase YP_001476954.1 797226 D 399741 CDS YP_001476955.1 157368966 5605109 797902..799791 1 NC_009832.1 PFAM: protein of unknown function DUF839; KEGG: pfl:PFL_5696 Tat (twin-arginine translocation) pathway signal sequence domain protein; hypothetical protein 799791 5605109 Spro_0721 Serratia proteamaculans 568 hypothetical protein YP_001476955.1 797902 D 399741 CDS YP_001476956.1 157368967 5605110 complement(799830..800681) 1 NC_009832.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 800681 apaH 5605110 apaH Serratia proteamaculans 568 diadenosine tetraphosphatase YP_001476956.1 799830 R 399741 CDS YP_001476957.1 157368968 5605111 complement(800684..801061) 1 NC_009832.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 801061 apaG 5605111 apaG Serratia proteamaculans 568 ApaG protein YP_001476957.1 800684 R 399741 CDS YP_001476958.1 157368969 5605068 complement(801074..801892) 1 NC_009832.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 801892 ksgA 5605068 ksgA Serratia proteamaculans 568 dimethyladenosine transferase YP_001476958.1 801074 R 399741 CDS YP_001476959.1 157368970 5605069 complement(801885..802877) 1 NC_009832.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 802877 pdxA 5605069 pdxA Serratia proteamaculans 568 4-hydroxythreonine-4-phosphate dehydrogenase YP_001476959.1 801885 R 399741 CDS YP_001476960.1 157368971 5605014 complement(802864..804162) 1 NC_009832.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 804162 5605014 Spro_0726 Serratia proteamaculans 568 peptidyl-prolyl cis-trans isomerase SurA YP_001476960.1 802864 R 399741 CDS YP_001476961.1 157368972 5605015 complement(804228..806591) 1 NC_009832.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 806591 5605015 Spro_0727 Serratia proteamaculans 568 organic solvent tolerance protein YP_001476961.1 804228 R 399741 CDS YP_001476962.1 157368973 5605016 806820..807641 1 NC_009832.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 807641 djlA 5605016 djlA Serratia proteamaculans 568 Dna-J like membrane chaperone protein YP_001476962.1 806820 D 399741 CDS YP_001476963.1 157368974 5605005 complement(807690..808340) 1 NC_009832.1 PFAM: pseudouridine synthase; KEGG: eca:ECA3854 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 808340 5605005 Spro_0729 Serratia proteamaculans 568 pseudouridine synthase YP_001476963.1 807690 R 399741 CDS YP_001476964.1 157368975 5605006 complement(808397..811303) 1 NC_009832.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 811303 5605006 Spro_0730 Serratia proteamaculans 568 ATP-dependent helicase HepA YP_001476964.1 808397 R 399741 CDS YP_001476965.1 157368976 5605007 complement(811689..814052) 1 NC_009832.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 814052 5605007 Spro_0731 Serratia proteamaculans 568 DNA polymerase II YP_001476965.1 811689 R 399741 CDS YP_001476966.1 157368977 5603773 814236..815006 1 NC_009832.1 PFAM: SNARE associated Golgi protein; KEGG: yen:YE0639 putative DedA-family membrane protein; hypothetical protein 815006 5603773 Spro_0732 Serratia proteamaculans 568 hypothetical protein YP_001476966.1 814236 D 399741 CDS YP_001476967.1 157368978 5603774 complement(815034..815327) 1 NC_009832.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 815327 5603774 Spro_0733 Serratia proteamaculans 568 acetolactate synthase 1 regulatory subunit YP_001476967.1 815034 R 399741 CDS YP_001476968.1 157368979 5603775 complement(815331..817025) 1 NC_009832.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eca:ECA3848 acetolactate synthase isozyme I large subunit; acetolactate synthase catalytic subunit 817025 5603775 Spro_0734 Serratia proteamaculans 568 acetolactate synthase catalytic subunit YP_001476968.1 815331 R 399741 CDS YP_001476969.1 157368980 5604942 complement(817342..818046) 1 NC_009832.1 with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit 818046 thiQ 5604942 thiQ Serratia proteamaculans 568 thiamine transporter ATP-binding subunit YP_001476969.1 817342 R 399741 CDS YP_001476970.1 157368981 5604943 complement(818033..819640) 1 NC_009832.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 819640 thiP 5604943 thiP Serratia proteamaculans 568 thiamine transporter membrane protein YP_001476970.1 818033 R 399741 CDS YP_001476971.1 157368982 5604944 complement(819616..820602) 1 NC_009832.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 820602 tbpA 5604944 tbpA Serratia proteamaculans 568 thiamine transporter substrate binding subunit YP_001476971.1 819616 R 399741 CDS YP_001476972.1 157368983 5604910 complement(820804..822465) 1 NC_009832.1 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 822465 5604910 Spro_0738 Serratia proteamaculans 568 transcriptional regulator SgrR YP_001476972.1 820804 R 399741 CDS YP_001476973.1 157368984 5604911 822556..822729 1 NC_009832.1 hypothetical protein 822729 5604911 Spro_0739 Serratia proteamaculans 568 hypothetical protein YP_001476973.1 822556 D 399741 CDS YP_001476974.1 157368985 5604901 822886..824085 1 NC_009832.1 TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0648 sugar efflux transporter; sugar efflux transporter 824085 5604901 Spro_0740 Serratia proteamaculans 568 sugar efflux transporter YP_001476974.1 822886 D 399741 CDS YP_001476975.1 157368986 5604902 824227..825699 1 NC_009832.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rfr:Rfer_1465 anion transporter; anion transporter 825699 5604902 Spro_0741 Serratia proteamaculans 568 anion transporter YP_001476975.1 824227 D 399741 CDS YP_001476976.1 157368987 5604903 complement(825749..826351) 1 NC_009832.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 826351 leuD 5604903 leuD Serratia proteamaculans 568 isopropylmalate isomerase small subunit YP_001476976.1 825749 R 399741 CDS YP_001476977.1 157368988 5604886 complement(826363..827763) 1 NC_009832.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 827763 5604886 Spro_0743 Serratia proteamaculans 568 isopropylmalate isomerase large subunit YP_001476977.1 826363 R 399741 CDS YP_001476978.1 157368989 5604887 complement(827765..828856) 1 NC_009832.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 828856 5604887 Spro_0744 Serratia proteamaculans 568 3-isopropylmalate dehydrogenase YP_001476978.1 827765 R 399741 CDS YP_001476979.1 157368990 5604888 complement(828859..830433) 1 NC_009832.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 830433 5604888 Spro_0745 Serratia proteamaculans 568 2-isopropylmalate synthase YP_001476979.1 828859 R 399741 CDS YP_001476980.1 157368991 5604883 831312..832259 1 NC_009832.1 activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 832259 leuO 5604883 leuO Serratia proteamaculans 568 leucine transcriptional activator YP_001476980.1 831312 D 399741 CDS YP_001476981.1 157368992 5604884 832725..834533 1 NC_009832.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ypi:YpsIP31758_3402 AMP binding protein; AMP-dependent synthetase and ligase 834533 5604884 Spro_0747 Serratia proteamaculans 568 AMP-dependent synthetase and ligase YP_001476981.1 832725 D 399741 CDS YP_001476982.1 157368993 5604885 834851..836569 1 NC_009832.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 836569 5604885 Spro_0748 Serratia proteamaculans 568 acetolactate synthase 3 catalytic subunit YP_001476982.1 834851 D 399741 CDS YP_001476983.1 157368994 5604819 836572..837063 1 NC_009832.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 837063 ilvH 5604819 ilvH Serratia proteamaculans 568 acetolactate synthase 3 regulatory subunit YP_001476983.1 836572 D 399741 CDS YP_001476984.1 157368995 5604820 837280..838284 1 NC_009832.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 838284 5604820 Spro_0750 Serratia proteamaculans 568 DNA-binding transcriptional regulator FruR YP_001476984.1 837280 D 399741 CDS YP_001476985.1 157368996 5604821 complement(838318..838758) 1 NC_009832.1 PFAM: protein of unknown function DUF1144; KEGG: ypi:YpsIP31758_3397 hypothetical protein; hypothetical protein 838758 5604821 Spro_0751 Serratia proteamaculans 568 hypothetical protein YP_001476985.1 838318 R 399741 CDS YP_001476986.1 157368997 5604770 839629..840087 1 NC_009832.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 840087 5604770 Spro_0752 Serratia proteamaculans 568 cell division protein MraZ YP_001476986.1 839629 D 399741 CDS YP_001476987.1 157368998 5604771 840090..841031 1 NC_009832.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: ypi:YpsIP31758_3395 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 841031 mraW 5604771 mraW Serratia proteamaculans 568 S-adenosyl-methyltransferase MraW YP_001476987.1 840090 D 399741 CDS YP_001476988.1 157368999 5603485 841028..841348 1 NC_009832.1 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 841348 5603485 Spro_0754 Serratia proteamaculans 568 cell division protein FtsL YP_001476988.1 841028 D 399741 CDS YP_001476989.1 157369000 5603486 841391..843154 1 NC_009832.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE0666 penicillin-binding protein 3; peptidoglycan glycosyltransferase 843154 5603486 Spro_0755 Serratia proteamaculans 568 peptidoglycan glycosyltransferase YP_001476989.1 841391 D 399741 CDS YP_001476990.1 157369001 5603487 843141..844628 1 NC_009832.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 844628 murE 5603487 murE Serratia proteamaculans 568 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001476990.1 843141 D 399741 CDS YP_001476991.1 157369002 5604741 844625..845986 1 NC_009832.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: ypp:YPDSF_3091 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 845986 murF 5604741 murF Serratia proteamaculans 568 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_001476991.1 844625 D 399741 CDS YP_001476992.1 157369003 5604742 845980..847062 1 NC_009832.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 847062 mraY 5604742 mraY Serratia proteamaculans 568 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001476992.1 845980 D 399741 CDS YP_001476993.1 157369004 5604743 847065..848384 1 NC_009832.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 848384 murD 5604743 murD Serratia proteamaculans 568 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001476993.1 847065 D 399741 CDS YP_001476994.1 157369005 5604637 848381..849583 1 NC_009832.1 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 849583 5604637 Spro_0760 Serratia proteamaculans 568 cell division protein FtsW YP_001476994.1 848381 D 399741 CDS YP_001476995.1 157369006 5604638 849587..850651 1 NC_009832.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 850651 murG 5604638 murG Serratia proteamaculans 568 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001476995.1 849587 D 399741 CDS YP_001476996.1 157369007 5604639 850735..852213 1 NC_009832.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 852213 murC 5604639 murC Serratia proteamaculans 568 UDP-N-acetylmuramate--L-alanine ligase YP_001476996.1 850735 D 399741 CDS YP_001476997.1 157369008 5604562 852203..853123 1 NC_009832.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 853123 ddl 5604562 ddl Serratia proteamaculans 568 D-alanine--D-alanine ligase YP_001476997.1 852203 D 399741 CDS YP_001476998.1 157369009 5604563 853125..853976 1 NC_009832.1 involved in septum formation; cell division protein FtsQ 853976 5604563 Spro_0764 Serratia proteamaculans 568 cell division protein FtsQ YP_001476998.1 853125 D 399741 CDS YP_001476999.1 157369010 5604564 853973..855229 1 NC_009832.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 855229 ftsA 5604564 ftsA Serratia proteamaculans 568 cell division protein FtsA YP_001476999.1 853973 D 399741 CDS YP_001477000.1 157369011 5604551 855304..856458 1 NC_009832.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 856458 5604551 Spro_0766 Serratia proteamaculans 568 cell division protein FtsZ YP_001477000.1 855304 D 399741 CDS YP_001477001.1 157369012 5604552 856514..857479 1 NC_009832.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 857479 lpxC 5604552 lpxC Serratia proteamaculans 568 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001477001.1 856514 D 399741 CDS YP_001477002.1 157369013 5604534 complement(857494..858018) 1 NC_009832.1 KEGG: ypi:YpsIP31758_3380 hypothetical protein; hypothetical protein 858018 5604534 Spro_0768 Serratia proteamaculans 568 hypothetical protein YP_001477002.1 857494 R 399741 CDS YP_001477003.1 157369014 5604535 858114..858578 1 NC_009832.1 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 858578 5604535 Spro_0769 Serratia proteamaculans 568 SecA regulator SecM YP_001477003.1 858114 D 399741 CDS YP_001477004.1 157369015 5604536 858645..861377 1 NC_009832.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 861377 5604536 Spro_0770 Serratia proteamaculans 568 preprotein translocase subunit SecA YP_001477004.1 858645 D 399741 CDS YP_001477005.1 157369016 5604410 861479..861883 1 NC_009832.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: yen:YE0682 mutator protein MutT; nucleoside triphosphate pyrophosphohydrolase 861883 5604410 Spro_0771 Serratia proteamaculans 568 nucleoside triphosphate pyrophosphohydrolase YP_001477005.1 861479 D 399741 CDS YP_001477006.1 157369017 5604411 complement(861991..862194) 1 NC_009832.1 PFAM: protein of unknown function DUF329; KEGG: ecc:c0121 zinc-binding protein; hypothetical protein 862194 5604411 Spro_0772 Serratia proteamaculans 568 hypothetical protein YP_001477006.1 861991 R 399741 CDS YP_001477007.1 157369018 5604412 complement(862245..862997) 1 NC_009832.1 PFAM: protein of unknown function DUF1342; KEGG: yen:YE0684 hypothetical protein; hypothetical protein 862997 5604412 Spro_0773 Serratia proteamaculans 568 hypothetical protein YP_001477007.1 862245 R 399741 CDS YP_001477008.1 157369019 5604324 complement(863003..863617) 1 NC_009832.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 863617 coaE 5604324 coaE Serratia proteamaculans 568 dephospho-CoA kinase YP_001477008.1 863003 R 399741 CDS YP_001477009.1 157369020 5604325 863949..864992 1 NC_009832.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 864992 5604325 Spro_0775 Serratia proteamaculans 568 guanosine 5'-monophosphate oxidoreductase YP_001477009.1 863949 D 399741 CDS YP_001477010.1 157369021 5604326 complement(865060..866259) 1 NC_009832.1 PFAM: type II secretion system protein; KEGG: ypi:YpsIP31758_3372 putative protein transport protein HofC; type IV pilin biogenesis protein 866259 5604326 Spro_0776 Serratia proteamaculans 568 type IV pilin biogenesis protein YP_001477010.1 865060 R 399741 CDS YP_001477011.1 157369022 5604278 complement(866256..867701) 1 NC_009832.1 PFAM: type II secretion system protein E; KEGG: eca:ECA3799 protein transport protein; hypothetical protein 867701 5604278 Spro_0777 Serratia proteamaculans 568 hypothetical protein YP_001477011.1 866256 R 399741 CDS YP_001477012.1 157369023 5604279 complement(867698..868147) 1 NC_009832.1 KEGG: yen:YE0690 putative prepilin peptidase dependent protein D precursor; putative major pilin subunit 868147 5604279 Spro_0778 Serratia proteamaculans 568 putative major pilin subunit YP_001477012.1 867698 R 399741 CDS YP_001477013.1 157369024 5604280 complement(868346..869236) 1 NC_009832.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase 869236 5604280 Spro_0779 Serratia proteamaculans 568 quinolinate phosphoribosyltransferase YP_001477013.1 868346 R 399741 CDS YP_001477014.1 157369025 5604206 869452..870306 1 NC_009832.1 involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE 870306 5604206 Spro_0780 Serratia proteamaculans 568 regulatory protein AmpE YP_001477014.1 869452 D 399741 CDS YP_001477015.1 157369026 5604207 complement(870367..871656) 1 NC_009832.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 871656 5604207 Spro_0781 Serratia proteamaculans 568 glutamate-1-semialdehyde aminotransferase YP_001477015.1 870367 R 399741 CDS YP_001477016.1 157369027 5604130 871835..873274 1 NC_009832.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 873274 5604130 Spro_0782 Serratia proteamaculans 568 chloride channel protein YP_001477016.1 871835 D 399741 CDS YP_001477017.1 157369028 5604131 873364..873708 1 NC_009832.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: ent:Ent638_0696 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 873708 5604131 Spro_0783 Serratia proteamaculans 568 iron-sulfur cluster assembly accessory protein YP_001477017.1 873364 D 399741 CDS YP_001477018.1 157369029 5604132 complement(873767..874030) 1 NC_009832.1 KEGG: eca:ECA3305 putative lipoprotein; putative lipoprotein 874030 5604132 Spro_0784 Serratia proteamaculans 568 putative lipoprotein YP_001477018.1 873767 R 399741 CDS YP_001477019.1 157369030 5604127 complement(874242..874856) 1 NC_009832.1 PFAM: protein of unknown function UPF0126; KEGG: yen:YE0737 hypothetical protein; hypothetical protein 874856 5604127 Spro_0785 Serratia proteamaculans 568 hypothetical protein YP_001477019.1 874242 R 399741 CDS YP_001477020.1 157369031 5604128 complement(874856..875662) 1 NC_009832.1 solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF 875662 5604128 Spro_0786 Serratia proteamaculans 568 vitamin B12-transporter protein BtuF YP_001477020.1 874856 R 399741 CDS YP_001477021.1 157369032 5604129 complement(875664..876365) 1 NC_009832.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 876365 5604129 Spro_0787 Serratia proteamaculans 568 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001477021.1 875664 R 399741 CDS YP_001477022.1 157369033 5604064 876495..878012 1 NC_009832.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 878012 dgt 5604064 dgt Serratia proteamaculans 568 deoxyguanosinetriphosphate triphosphohydrolase YP_001477022.1 876495 D 399741 CDS YP_001477023.1 157369034 5604065 878203..879633 1 NC_009832.1 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 879633 5604065 Spro_0789 Serratia proteamaculans 568 serine endoprotease YP_001477023.1 878203 D 399741 CDS YP_001477024.1 157369035 5604066 complement(879700..882420) 1 NC_009832.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 882420 5604066 Spro_0790 Serratia proteamaculans 568 hybrid sensory histidine kinase BarA YP_001477024.1 879700 R 399741 CDS YP_001477025.1 157369036 5604056 882633..882803 1 NC_009832.1 KEGG: pmy:Pmen_1734 RNA methyltransferase, TrmA family; RNA methyltransferase 882803 5604056 Spro_0791 Serratia proteamaculans 568 RNA methyltransferase YP_001477025.1 882633 D 399741 CDS YP_001477026.1 157369037 5604057 882936..885167 1 NC_009832.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 885167 relA 5604057 relA Serratia proteamaculans 568 GDP/GTP pyrophosphokinase YP_001477026.1 882936 D 399741 CDS YP_001477027.1 157369038 5604058 885228..886022 1 NC_009832.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 886022 mazG 5604058 mazG Serratia proteamaculans 568 nucleoside triphosphate pyrophosphohydrolase YP_001477027.1 885228 D 399741 CDS YP_001477028.1 157369039 5603945 886390..888027 1 NC_009832.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 888027 pyrG 5603945 pyrG Serratia proteamaculans 568 CTP synthetase YP_001477028.1 886390 D 399741 CDS YP_001477029.1 157369040 5603946 888109..889404 1 NC_009832.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 889404 eno 5603946 eno Serratia proteamaculans 568 phosphopyruvate hydratase YP_001477029.1 888109 D 399741 CDS YP_001477030.1 157369041 5603808 889719..890909 1 NC_009832.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pap:PSPA7_2666 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 890909 5603808 Spro_0796 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001477030.1 889719 D 399741 CDS YP_001477031.1 157369042 5603809 890920..891291 1 NC_009832.1 KEGG: pfl:PFL_1327 hypothetical protein; hypothetical protein 891291 5603809 Spro_0797 Serratia proteamaculans 568 hypothetical protein YP_001477031.1 890920 D 399741 CDS YP_001477032.1 157369043 5603810 891338..892528 1 NC_009832.1 KEGG: pfl:PFL_3514 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Aluminium resistance family protein; methionine gamma-lyase 892528 5603810 Spro_0798 Serratia proteamaculans 568 methionine gamma-lyase YP_001477032.1 891338 D 399741 CDS YP_001477033.1 157369044 5603752 complement(892579..894102) 1 NC_009832.1 KEGG: psb:Psyr_4832 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 894102 5603752 Spro_0799 Serratia proteamaculans 568 histidine ammonia-lyase YP_001477033.1 892579 R 399741 CDS YP_001477034.1 157369045 5603753 complement(894113..894970) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pae:PA5094 putative glycine betaine/proline transport system ATP-binding protein; ABC transporter-like protein 894970 5603753 Spro_0800 Serratia proteamaculans 568 ABC transporter-like protein YP_001477034.1 894113 R 399741 CDS YP_001477035.1 157369046 5603754 complement(894976..895821) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pau:PA14_67280 putative amino acid transporter permease protein; binding-protein-dependent transport systems inner membrane component 895821 5603754 Spro_0801 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477035.1 894976 R 399741 CDS YP_001477036.1 157369047 5603738 complement(895890..896855) 1 NC_009832.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pfo:Pfl_0362 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 896855 5603738 Spro_0802 Serratia proteamaculans 568 glycine betaine ABC transporter substrate-binding protein YP_001477036.1 895890 R 399741 CDS YP_001477037.1 157369048 5603739 complement(896908..898299) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: yen:YE4093 amino acid permease; amino acid permease-associated protein 898299 5603739 Spro_0803 Serratia proteamaculans 568 amino acid permease-associated protein YP_001477037.1 896908 R 399741 CDS YP_001477038.1 157369049 5603740 complement(898400..899935) 1 NC_009832.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 899935 5603740 Spro_0804 Serratia proteamaculans 568 histidine ammonia-lyase YP_001477038.1 898400 R 399741 CDS YP_001477039.1 157369050 5603675 complement(899932..901713) 1 NC_009832.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 901713 5603675 Spro_0805 Serratia proteamaculans 568 urocanate hydratase YP_001477039.1 899932 R 399741 CDS YP_001477040.1 157369051 5603676 complement(901999..902175) 1 NC_009832.1 hypothetical protein 902175 5603676 Spro_0806 Serratia proteamaculans 568 hypothetical protein YP_001477040.1 901999 R 399741 CDS YP_001477041.1 157369052 5603677 complement(902176..903336) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B2293 4-hydroxybenzoate transporter, MFS-type AAHS family; major facilitator transporter 903336 5603677 Spro_0807 Serratia proteamaculans 568 major facilitator transporter YP_001477041.1 902176 R 399741 CDS YP_001477042.1 157369053 5603638 903660..904331 1 NC_009832.1 PFAM: Radical SAM domain protein; KEGG: ypi:YpsIP31758_3313 radical SAM domain protein; radical SAM domain-containing protein 904331 5603638 Spro_0808 Serratia proteamaculans 568 radical SAM domain-containing protein YP_001477042.1 903660 D 399741 CDS YP_001477043.1 157369054 5603639 complement(904550..904909) 1 NC_009832.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: ypi:YpsIP31758_3312 putative 6-pyruvoyl tetrahydrobiopterin synthase; putative 6-pyruvoyl tetrahydropterin synthase 904909 5603639 Spro_0809 Serratia proteamaculans 568 putative 6-pyruvoyl tetrahydropterin synthase YP_001477043.1 904550 R 399741 CDS YP_001477044.1 157369055 5603583 905347..907146 1 NC_009832.1 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha 907146 cysJ 5603583 cysJ Serratia proteamaculans 568 sulfite reductase subunit alpha YP_001477044.1 905347 D 399741 CDS YP_001477045.1 157369056 5603584 907146..908861 1 NC_009832.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 908861 5603584 Spro_0811 Serratia proteamaculans 568 sulfite reductase subunit beta YP_001477045.1 907146 D 399741 CDS YP_001477046.1 157369057 5603585 908933..909667 1 NC_009832.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 909667 5603585 Spro_0812 Serratia proteamaculans 568 phosphoadenosine phosphosulfate reductase YP_001477046.1 908933 D 399741 CDS YP_001477047.1 157369058 5603566 complement(909713..910039) 1 NC_009832.1 KEGG: asa:ASA_P5G104 hypothetical protein; hypothetical protein 910039 5603566 Spro_0813 Serratia proteamaculans 568 hypothetical protein YP_001477047.1 909713 R 399741 CDS YP_001477048.1 157369059 5603567 complement(910051..910326) 1 NC_009832.1 KEGG: yen:YE0485 hypothetical protein; hypothetical protein 910326 5603567 Spro_0814 Serratia proteamaculans 568 hypothetical protein YP_001477048.1 910051 R 399741 CDS YP_001477049.1 157369060 5603568 complement(910418..911491) 1 NC_009832.1 catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; alkaline phosphatase isozyme conversion aminopeptidase 911491 5603568 Spro_0815 Serratia proteamaculans 568 alkaline phosphatase isozyme conversion aminopeptidase YP_001477049.1 910418 R 399741 CDS YP_001477050.1 157369061 5603443 911768..912058 1 NC_009832.1 hypothetical protein 912058 5603443 Spro_0816 Serratia proteamaculans 568 hypothetical protein YP_001477050.1 911768 D 399741 CDS YP_001477051.1 157369062 5603444 912246..913676 1 NC_009832.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: yen:YE0761 siroheme synthase; uroporphyrin-III C-methyltransferase 913676 5603444 Spro_0817 Serratia proteamaculans 568 uroporphyrin-III C-methyltransferase YP_001477051.1 912246 D 399741 CDS YP_001477052.1 157369063 5603445 913686..914594 1 NC_009832.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 914594 5603445 Spro_0818 Serratia proteamaculans 568 sulfate adenylyltransferase subunit 2 YP_001477052.1 913686 D 399741 CDS YP_001477053.1 157369064 5603269 914606..916051 1 NC_009832.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 916051 cysN 5603269 cysN Serratia proteamaculans 568 sulfate adenylyltransferase subunit 1 YP_001477053.1 914606 D 399741 CDS YP_001477054.1 157369065 5603270 916053..916682 1 NC_009832.1 PFAM: adenylylsulfate kinase; KEGG: yps:YPTB0767 adenylylsulfate kinase; adenylyl-sulfate kinase 916682 5603270 Spro_0820 Serratia proteamaculans 568 adenylyl-sulfate kinase YP_001477054.1 916053 D 399741 CDS YP_001477055.1 157369066 5603271 916768..917085 1 NC_009832.1 KEGG: yen:YE0766 hypothetical protein; hypothetical protein 917085 5603271 Spro_0821 Serratia proteamaculans 568 hypothetical protein YP_001477055.1 916768 D 399741 CDS YP_001477056.1 157369067 5603086 complement(917138..917860) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3539 amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 917860 5603086 Spro_0822 Serratia proteamaculans 568 ABC transporter-like protein YP_001477056.1 917138 R 399741 CDS YP_001477057.1 157369068 5603087 complement(917844..918608) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3538 amino acid ABC transporter; polar amino acid ABC transporter inner membrane subunit 918608 5603087 Spro_0823 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477057.1 917844 R 399741 CDS YP_001477058.1 157369069 5603078 complement(918680..919450) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: eca:ECA3537 amino acid-binding protein; extracellular solute-binding protein 919450 5603078 Spro_0824 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477058.1 918680 R 399741 CDS YP_001477059.1 157369070 5603079 919857..920177 1 NC_009832.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 920177 ftsB 5603079 ftsB Serratia proteamaculans 568 cell division protein FtsB YP_001477059.1 919857 D 399741 CDS YP_001477060.1 157369071 5603080 920181..920888 1 NC_009832.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ypi:YpsIP31758_3299 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 920888 5603080 Spro_0826 Serratia proteamaculans 568 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001477060.1 920181 D 399741 CDS YP_001477061.1 157369072 5603032 920899..921372 1 NC_009832.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 921372 ispF 5603032 ispF Serratia proteamaculans 568 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001477061.1 920899 D 399741 CDS YP_001477062.1 157369073 5603033 921377..922423 1 NC_009832.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 922423 truD 5603033 truD Serratia proteamaculans 568 tRNA pseudouridine synthase D YP_001477062.1 921377 D 399741 CDS YP_001477063.1 157369074 5603034 922695..923456 1 NC_009832.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 923456 surE 5603034 surE Serratia proteamaculans 568 stationary phase survival protein SurE YP_001477063.1 922695 D 399741 CDS YP_001477064.1 157369075 5602884 923450..924076 1 NC_009832.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 924076 pcm 5602884 pcm Serratia proteamaculans 568 protein-L-isoaspartate O-methyltransferase YP_001477064.1 923450 D 399741 CDS YP_001477065.1 157369076 5602885 924401..925387 1 NC_009832.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 925387 nlpD 5602885 nlpD Serratia proteamaculans 568 lipoprotein NlpD YP_001477065.1 924401 D 399741 CDS YP_001477066.1 157369077 5602886 925441..926439 1 NC_009832.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 926439 5602886 Spro_0832 Serratia proteamaculans 568 RNA polymerase sigma factor RpoS YP_001477066.1 925441 D 399741 CDS YP_001477067.1 157369078 5602830 complement(926520..929075) 1 NC_009832.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 929075 5602830 Spro_0833 Serratia proteamaculans 568 DNA mismatch repair protein MutS YP_001477067.1 926520 R 399741 CDS YP_001477068.1 157369079 5602831 929828..930208 1 NC_009832.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 930208 5602831 Spro_0834 Serratia proteamaculans 568 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB YP_001477068.1 929828 D 399741 CDS YP_001477069.1 157369080 5602832 930220..931581 1 NC_009832.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC 931581 5602832 Spro_0835 Serratia proteamaculans 568 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC YP_001477069.1 930220 D 399741 CDS YP_001477070.1 157369081 5602807 931630..933015 1 NC_009832.1 PFAM: glycoside hydrolase family 1; KEGG: yen:YE0969 putative glycosyl hydrolase; beta-glucosidase 933015 5602807 Spro_0836 Serratia proteamaculans 568 beta-glucosidase YP_001477070.1 931630 D 399741 CDS YP_001477071.1 157369082 5602808 933015..933878 1 NC_009832.1 represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR 933878 5602808 Spro_0837 Serratia proteamaculans 568 DNA-binding transcriptional regulator ChbR YP_001477071.1 933015 D 399741 CDS YP_001477072.1 157369083 5602719 934020..934793 1 NC_009832.1 PFAM: YdjC family protein; KEGG: ypi:YpsIP31758_1095 UPF0249 protein ChbG; hypothetical protein 934793 5602719 Spro_0838 Serratia proteamaculans 568 hypothetical protein YP_001477072.1 934020 D 399741 CDS YP_001477073.1 157369084 5602720 complement(934824..936218) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0827 hypothetical protein; major facilitator transporter 936218 5602720 Spro_0839 Serratia proteamaculans 568 major facilitator transporter YP_001477073.1 934824 R 399741 CDS YP_001477074.1 157369085 5602721 936469..936957 1 NC_009832.1 PFAM: CinA domain protein; KEGG: ypi:YpsIP31758_3241 competence/damage-inducible protein CinA domain protein; competence damage-inducible protein A 936957 5602721 Spro_0840 Serratia proteamaculans 568 competence damage-inducible protein A YP_001477074.1 936469 D 399741 CDS YP_001477075.1 157369086 5602707 937070..938131 1 NC_009832.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 938131 recA 5602707 recA Serratia proteamaculans 568 recombinase A YP_001477075.1 937070 D 399741 CDS YP_001477076.1 157369087 5602708 938196..938702 1 NC_009832.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 938702 recX 5602708 recX Serratia proteamaculans 568 recombination regulator RecX YP_001477076.1 938196 D 399741 CDS YP_001477077.1 157369088 5602709 938785..941463 1 NC_009832.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 941463 alaS 5602709 alaS Serratia proteamaculans 568 alanyl-tRNA synthetase YP_001477077.1 938785 D 399741 CDS YP_001477078.1 157369089 5602658 941752..941901 1 NC_009832.1 PFAM: carbon storage regulator; KEGG: plu:plu1251 carbon storage regulator homolog; carbon starvation protein CstA 941901 5602658 Spro_0844 Serratia proteamaculans 568 carbon starvation protein CstA YP_001477078.1 941752 D 399741 CDS YP_001477079.1 157369090 5607378 942877..943443 1 NC_009832.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 943443 5607378 Spro_0845 Serratia proteamaculans 568 fructose-1-phosphatase YP_001477079.1 942877 D 399741 CDS YP_001477080.1 157369091 5602660 943440..943868 1 NC_009832.1 KEGG: yen:YE0837 hypothetical protein; hypothetical protein 943868 5602660 Spro_0846 Serratia proteamaculans 568 hypothetical protein YP_001477080.1 943440 D 399741 CDS YP_001477081.1 157369092 5602614 943951..945513 1 NC_009832.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 945513 5602614 Spro_0847 Serratia proteamaculans 568 glutamate--cysteine ligase YP_001477081.1 943951 D 399741 CDS YP_001477082.1 157369093 5602615 945680..946195 1 NC_009832.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 946195 5602615 Spro_0848 Serratia proteamaculans 568 S-ribosylhomocysteinase YP_001477082.1 945680 D 399741 CDS YP_001477083.1 157369094 5602616 complement(946264..947553) 1 NC_009832.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: yen:YE0840 hypothetical protein; hypothetical protein 947553 5602616 Spro_0849 Serratia proteamaculans 568 hypothetical protein YP_001477083.1 946264 R 399741 CDS YP_001477084.1 157369095 5602612 complement(947594..948448) 1 NC_009832.1 PFAM: cytochrome c assembly protein; KEGG: yps:YPTB0832 hypothetical protein; cytochrome c assembly protein 948448 5602612 Spro_0850 Serratia proteamaculans 568 cytochrome c assembly protein YP_001477084.1 947594 R 399741 CDS YP_001477085.1 157369096 5602613 948555..949916 1 NC_009832.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 949916 5602613 Spro_0851 Serratia proteamaculans 568 signal recognition particle protein YP_001477085.1 948555 D 399741 CDS YP_001477086.1 157369097 5602494 950133..950381 1 NC_009832.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 950381 rpsP 5602494 rpsP Serratia proteamaculans 568 30S ribosomal protein S16 YP_001477086.1 950133 D 399741 CDS YP_001477087.1 157369098 5602495 950400..950948 1 NC_009832.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 950948 rimM 5602495 rimM Serratia proteamaculans 568 16S rRNA-processing protein RimM YP_001477087.1 950400 D 399741 CDS YP_001477088.1 157369099 5602496 951001..951768 1 NC_009832.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 951768 trmD 5602496 trmD Serratia proteamaculans 568 tRNA (guanine-N(1)-)-methyltransferase YP_001477088.1 951001 D 399741 CDS YP_001477089.1 157369100 5602473 951823..952179 1 NC_009832.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 952179 rplS 5602473 rplS Serratia proteamaculans 568 50S ribosomal protein L19 YP_001477089.1 951823 D 399741 CDS YP_001477090.1 157369101 5602474 complement(952334..952552) 1 NC_009832.1 PFAM: transcriptional activator Ogr/delta; KEGG: ecv:APECO1_14 Ogr; transcriptional activator Ogr/delta 952552 5602474 Spro_0856 Serratia proteamaculans 568 transcriptional activator Ogr/delta YP_001477090.1 952334 R 399741 CDS YP_001477091.1 157369102 5602475 complement(952641..953732) 1 NC_009832.1 PFAM: late control D family protein; KEGG: yps:YPTB1739 similar to D protein bacteriophage 186 and P2; late control D family protein 953732 5602475 Spro_0857 Serratia proteamaculans 568 late control D family protein YP_001477091.1 952641 R 399741 CDS YP_001477092.1 157369103 5605415 complement(953729..954202) 1 NC_009832.1 PFAM: P2 GpU family protein; KEGG: yps:YPTB1740 putative phage tail protein; P2 GpU family protein 954202 5605415 Spro_0858 Serratia proteamaculans 568 P2 GpU family protein YP_001477092.1 953729 R 399741 CDS YP_001477093.1 157369104 5605416 complement(954219..956324) 1 NC_009832.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: ent:Ent638_1357 phage tail-like protein; TP901 family phage tail tape measure protein 956324 5605416 Spro_0859 Serratia proteamaculans 568 TP901 family phage tail tape measure protein YP_001477093.1 954219 R 399741 CDS YP_001477094.1 157369105 5605417 complement(956317..956451) 1 NC_009832.1 PFAM: P2 GpE family protein; KEGG: kpn:KPN_04861 putative prophage tail protein; P2 GpE family protein 956451 5605417 Spro_0860 Serratia proteamaculans 568 P2 GpE family protein YP_001477094.1 956317 R 399741 CDS YP_001477095.1 157369106 5603103 complement(956472..956759) 1 NC_009832.1 PFAM: tail E family protein; KEGG: yps:YPTB1743 putative tail protein gpE P2 bacteriophage; tail E family protein 956759 5603103 Spro_0861 Serratia proteamaculans 568 tail E family protein YP_001477095.1 956472 R 399741 CDS YP_001477096.1 157369107 5603104 complement(956824..957333) 1 NC_009832.1 TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: yps:YPTB1744 putative tail tube protein FII (bacteriophage P2); phage major tail tube protein 957333 5603104 Spro_0862 Serratia proteamaculans 568 phage major tail tube protein YP_001477096.1 956824 R 399741 CDS YP_001477097.1 157369108 5603105 complement(957347..958516) 1 NC_009832.1 PFAM: tail sheath protein; KEGG: yps:YPTB1745 putative tail sheath protein (P2 and 186 bacteriophage); tail sheath protein 958516 5603105 Spro_0863 Serratia proteamaculans 568 tail sheath protein YP_001477097.1 957347 R 399741 CDS YP_001477098.1 157369109 5602768 complement(958660..959214) 1 NC_009832.1 PFAM: tail assembly chaperone gp38; KEGG: sgl:SG0710 hypothetical protein; tail assembly chaperone gp38 959214 5602768 Spro_0864 Serratia proteamaculans 568 tail assembly chaperone gp38 YP_001477098.1 958660 R 399741 CDS YP_001477099.1 157369110 5602769 complement(959216..960880) 1 NC_009832.1 PFAM: tail fiber repeat 2 protein; KEGG: plu:plu0021 hypothetical protein; tail fiber repeat 2-containing protein 960880 5602769 Spro_0865 Serratia proteamaculans 568 tail fiber repeat 2-containing protein YP_001477099.1 959216 R 399741 CDS YP_001477100.1 157369111 5602582 complement(960877..964170) 1 NC_009832.1 TIGRFAM: phage tail protein I; PFAM: tail protein I; KEGG: yen:YE1663 phage tail protein; phage tail protein I 964170 5602582 Spro_0866 Serratia proteamaculans 568 phage tail protein I YP_001477100.1 960877 R 399741 CDS YP_001477101.1 157369112 5602583 complement(964163..965071) 1 NC_009832.1 PFAM: Baseplate J family protein; KEGG: yps:YPTB1749 probable bacteriophage protein; baseplate J family protein 965071 5602583 Spro_0867 Serratia proteamaculans 568 baseplate J family protein YP_001477101.1 964163 R 399741 CDS YP_001477102.1 157369113 5602584 complement(965076..965426) 1 NC_009832.1 PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 possible phage-related protein; GPW/gp25 family protein 965426 5602584 Spro_0868 Serratia proteamaculans 568 GPW/gp25 family protein YP_001477102.1 965076 R 399741 CDS YP_001477103.1 157369114 5602649 complement(965423..966058) 1 NC_009832.1 TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: yps:YPTB1751 putative phage-related baseplate assembly protein; phage baseplate assembly protein V 966058 5602649 Spro_0869 Serratia proteamaculans 568 phage baseplate assembly protein V YP_001477103.1 965423 R 399741 CDS YP_001477104.1 157369115 5602650 complement(966147..966611) 1 NC_009832.1 PFAM: P2 phage tail completion R family protein; KEGG: yps:YPTB1850 gpR [Enterobacteria phage P2]; P2 phage tail completion R family protein 966611 5602650 Spro_0870 Serratia proteamaculans 568 P2 phage tail completion R family protein YP_001477104.1 966147 R 399741 CDS YP_001477105.1 157369116 5602651 complement(966651..967163) 1 NC_009832.1 PFAM: glycoside hydrolase family 24; KEGG: yps:YPTB1755 putative phage lysozyme; glycoside hydrolase family protein 967163 5602651 Spro_0871 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001477105.1 966651 R 399741 CDS YP_001477106.1 157369117 5602567 complement(967147..967365) 1 NC_009832.1 KEGG: yps:YPTB1756 putative prophage Hp1 family holin; prophage Hp1 family holin 967365 5602567 Spro_0872 Serratia proteamaculans 568 prophage Hp1 family holin YP_001477106.1 967147 R 399741 CDS YP_001477107.1 157369118 5602568 complement(967369..967572) 1 NC_009832.1 PFAM: tail X family protein; KEGG: yps:YPTB1757 putative phage-related tail protein; tail X family protein 967572 5602568 Spro_0873 Serratia proteamaculans 568 tail X family protein YP_001477107.1 967369 R 399741 CDS YP_001477108.1 157369119 5602569 complement(968036..970099) 1 NC_009832.1 PFAM: replication gene A; KEGG: ecv:APECO1_4464 putative phage replication initiation protein; replication gene A 970099 5602569 Spro_0874 Serratia proteamaculans 568 replication gene A YP_001477108.1 968036 R 399741 CDS YP_001477109.1 157369120 5602710 complement(970104..970325) 1 NC_009832.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; PFAM: zinc finger DksA/TraR C4-type; KEGG: yen:YE1687 hypothetical 8.2 kDa protein in gpa 5'region; TraR/DksA family transcriptional regulator 970325 5602710 Spro_0875 Serratia proteamaculans 568 TraR/DksA family transcriptional regulator YP_001477109.1 970104 R 399741 CDS YP_001477110.1 157369121 5602711 complement(970400..970705) 1 NC_009832.1 KEGG: yps:YPTB1768 similar to gpB bacteriophage P2; gpB bacteriophage P2-like protein 970705 5602711 Spro_0876 Serratia proteamaculans 568 gpB bacteriophage P2-like protein YP_001477110.1 970400 R 399741 CDS YP_001477111.1 157369122 5602712 970971..971837 1 NC_009832.1 PFAM: CI repressor; KEGG: ecc:c0934 hypothetical protein; CI repressor 971837 5602712 Spro_0877 Serratia proteamaculans 568 CI repressor YP_001477111.1 970971 D 399741 CDS YP_001477112.1 157369123 5602519 complement(971892..972656) 1 NC_009832.1 PFAM: protein of unknown function DUF481; KEGG: ypi:YpsIP31758_3223 hypothetical protein; hypothetical protein 972656 5602519 Spro_0878 Serratia proteamaculans 568 hypothetical protein YP_001477112.1 971892 R 399741 CDS YP_001477113.1 157369124 5602520 973241..974314 1 NC_009832.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 974314 5602520 Spro_0879 Serratia proteamaculans 568 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001477113.1 973241 D 399741 CDS YP_001477114.1 157369125 5602521 974321..975442 1 NC_009832.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 975442 tyrA 5602521 tyrA Serratia proteamaculans 568 bifunctional chorismate mutase/prephenate dehydrogenase YP_001477114.1 974321 D 399741 CDS YP_001477115.1 157369126 5602930 complement(975484..976641) 1 NC_009832.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 976641 pheA 5602930 pheA Serratia proteamaculans 568 bifunctional chorismate mutase/prephenate dehydratase YP_001477115.1 975484 R 399741 CDS YP_001477116.1 157369127 5602931 complement(976933..977274) 1 NC_009832.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: ypi:YpsIP31758_3216 ribosomal subunit interface protein; sigma 54 modulation protein/30S ribosomal protein S30EA 977274 5602931 Spro_0882 Serratia proteamaculans 568 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001477116.1 976933 R 399741 CDS YP_001477117.1 157369128 5602953 complement(977587..978318) 1 NC_009832.1 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO 978318 5602953 Spro_0883 Serratia proteamaculans 568 outer membrane protein assembly complex subunit YfiO YP_001477117.1 977587 R 399741 CDS YP_001477118.1 157369129 5602954 978450..979427 1 NC_009832.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 979427 rluD 5602954 rluD Serratia proteamaculans 568 23S rRNA pseudouridine synthase D YP_001477118.1 978450 D 399741 CDS YP_001477119.1 157369130 5602955 979427..980158 1 NC_009832.1 PFAM: protein of unknown function DUF152; KEGG: yen:YE0892 hypothetical protein; hypothetical protein 980158 5602955 Spro_0885 Serratia proteamaculans 568 hypothetical protein YP_001477119.1 979427 D 399741 CDS YP_001477120.1 157369131 5603145 980289..982862 1 NC_009832.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: yen:YE0893 Clp ATPase; protein disaggregation chaperone 982862 5603145 Spro_0886 Serratia proteamaculans 568 protein disaggregation chaperone YP_001477120.1 980289 D 399741 CDS YP_001477121.1 157369132 5607143 complement(988922..989323) 1 NC_009832.1 KEGG: yen:YE0895 putative lipoprotein; putative lipoprotein 989323 5607143 Spro_0887 Serratia proteamaculans 568 putative lipoprotein YP_001477121.1 988922 R 399741 CDS YP_001477122.1 157369133 5603147 989633..990313 1 NC_009832.1 KEGG: yen:YE0896 hypothetical protein; hypothetical protein 990313 5603147 Spro_0888 Serratia proteamaculans 568 hypothetical protein YP_001477122.1 989633 D 399741 CDS YP_001477123.1 157369134 5603382 990313..991131 1 NC_009832.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: yen:YE0897 putative acyltransferase; phospholipid/glycerol acyltransferase 991131 5603382 Spro_0889 Serratia proteamaculans 568 phospholipid/glycerol acyltransferase YP_001477123.1 990313 D 399741 CDS YP_001477124.1 157369135 5603383 991121..991396 1 NC_009832.1 KEGG: yen:YE0898 putative acyl carrier protein; putative acyl carrier protein 991396 5603383 Spro_0890 Serratia proteamaculans 568 putative acyl carrier protein YP_001477124.1 991121 D 399741 CDS YP_001477125.1 157369136 5603384 991406..991657 1 NC_009832.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 991657 5603384 Spro_0891 Serratia proteamaculans 568 acyl carrier protein YP_001477125.1 991406 D 399741 CDS YP_001477126.1 157369137 5603470 991700..992257 1 NC_009832.1 KEGG: yen:YE0900 putative inner membrane protein; hypothetical protein 992257 5603470 Spro_0892 Serratia proteamaculans 568 hypothetical protein YP_001477126.1 991700 D 399741 CDS YP_001477127.1 157369138 5603471 992224..993597 1 NC_009832.1 KEGG: yen:YE0901 putative AMP-binding protein; putative AMP-binding protein 993597 5603471 Spro_0893 Serratia proteamaculans 568 putative AMP-binding protein YP_001477127.1 992224 D 399741 CDS YP_001477128.1 157369139 5603472 993594..993938 1 NC_009832.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: yen:YE0902 putative dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 993938 5603472 Spro_0894 Serratia proteamaculans 568 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001477128.1 993594 D 399741 CDS YP_001477129.1 157369140 5603488 993929..995647 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: yen:YE0903 putative bifunctional glycosyl transferase/acyl transferase; glycosyl transferase family protein 995647 5603488 Spro_0895 Serratia proteamaculans 568 glycosyl transferase family protein YP_001477129.1 993929 D 399741 CDS YP_001477130.1 157369141 5603489 995644..996072 1 NC_009832.1 PFAM: thioesterase superfamily protein; KEGG: yen:YE0904 putative thioesterase; thioesterase superfamily protein 996072 5603489 Spro_0896 Serratia proteamaculans 568 thioesterase superfamily protein YP_001477130.1 995644 D 399741 CDS YP_001477131.1 157369142 5603490 996069..996674 1 NC_009832.1 KEGG: yen:YE0905 putative outer-membrane lipoprotein carrier protein; putative outer-membrane lipoprotein carrier protein 996674 5603490 Spro_0897 Serratia proteamaculans 568 putative outer-membrane lipoprotein carrier protein YP_001477131.1 996069 D 399741 CDS YP_001477132.1 157369143 5603514 996664..998970 1 NC_009832.1 KEGG: yen:YE0906 putative inner membrane protein; hypothetical protein 998970 5603514 Spro_0898 Serratia proteamaculans 568 hypothetical protein YP_001477132.1 996664 D 399741 CDS YP_001477133.1 157369144 5603515 998970..999542 1 NC_009832.1 KEGG: yen:YE0907 putative lipoprotein; putative lipoprotein 999542 5603515 Spro_0899 Serratia proteamaculans 568 putative lipoprotein YP_001477133.1 998970 D 399741 CDS YP_001477134.1 157369145 5602996 999542..1000711 1 NC_009832.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 1000711 5602996 Spro_0900 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase I YP_001477134.1 999542 D 399741 CDS YP_001477135.1 157369146 5602997 1000708..1001181 1 NC_009832.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: yen:YE0909 putative dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1001181 5602997 Spro_0901 Serratia proteamaculans 568 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001477135.1 1000708 D 399741 CDS YP_001477136.1 157369147 5602998 1001178..1001909 1 NC_009832.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 1001909 fabG 5602998 fabG Serratia proteamaculans 568 3-ketoacyl-(acyl-carrier-protein) reductase YP_001477136.1 1001178 D 399741 CDS YP_001477137.1 157369148 5603646 1001906..1003135 1 NC_009832.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1003135 5603646 Spro_0903 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase II YP_001477137.1 1001906 D 399741 CDS YP_001477138.1 157369149 5603647 1003277..1004080 1 NC_009832.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B 1004080 dkgB 5603647 dkgB Serratia proteamaculans 568 2,5-diketo-D-gluconate reductase B YP_001477138.1 1003277 D 399741 CDS YP_001477139.1 157369150 5603648 complement(1004125..1005012) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE0914 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 1005012 5603648 Spro_0905 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477139.1 1004125 R 399741 CDS YP_001477140.1 157369151 5603761 1005118..1006293 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_00223 putative drug efflux protein; major facilitator transporter 1006293 5603761 Spro_0906 Serratia proteamaculans 568 major facilitator transporter YP_001477140.1 1005118 D 399741 CDS YP_001477141.1 157369152 5603762 1006557..1007330 1 NC_009832.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sgl:SG0587 hypothetical protein; hypothetical protein 1007330 5603762 Spro_0907 Serratia proteamaculans 568 hypothetical protein YP_001477141.1 1006557 D 399741 CDS YP_001477142.1 157369153 5603763 complement(1007395..1008822) 1 NC_009832.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 1008822 mltD 5603763 mltD Serratia proteamaculans 568 membrane-bound lytic murein transglycosylase D YP_001477142.1 1007395 R 399741 CDS YP_001477143.1 157369154 5603796 complement(1008855..1009610) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_1052 metallo-beta-lactamase family protein; hydroxyacylglutathione hydrolase 1009610 5603796 Spro_0909 Serratia proteamaculans 568 hydroxyacylglutathione hydrolase YP_001477143.1 1008855 R 399741 CDS YP_001477144.1 157369155 5603797 1009655..1010374 1 NC_009832.1 PFAM: Methyltransferase type 11; KEGG: yen:YE0920 hypothetical protein; type 11 methyltransferase 1010374 5603797 Spro_0910 Serratia proteamaculans 568 type 11 methyltransferase YP_001477144.1 1009655 D 399741 CDS YP_001477145.1 157369156 5603798 complement(1010371..1010838) 1 NC_009832.1 PFAM: ribonuclease H; KEGG: ypi:YpsIP31758_1054 RNase H; ribonuclease H 1010838 5603798 Spro_0911 Serratia proteamaculans 568 ribonuclease H YP_001477145.1 1010371 R 399741 CDS YP_001477146.1 157369157 5603971 1010911..1011651 1 NC_009832.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1011651 5603971 Spro_0912 Serratia proteamaculans 568 DNA polymerase III subunit epsilon YP_001477146.1 1010911 D 399741 CDS YP_001477147.1 157369158 5605918 complement(1011921..1013381) 1 NC_009832.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: kpn:KPN_01790 putative allantoin permease; cytosine/purines uracil thiamine allantoin permease 1013381 5605918 Spro_0913 Serratia proteamaculans 568 cytosine/purines uracil thiamine allantoin permease YP_001477147.1 1011921 R 399741 CDS YP_001477148.1 157369159 5603973 1013548..1014297 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: kpn:KPN_01789 hypothetical transcriptional regulator; GntR family transcriptional regulator 1014297 5603973 Spro_0914 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001477148.1 1013548 D 399741 CDS YP_001477149.1 157369160 5604304 1014294..1015037 1 NC_009832.1 PFAM: Asp/Glu racemase; KEGG: kpn:KPN_01788 putative hydantoin racemase; Asp/Glu racemase 1015037 5604304 Spro_0915 Serratia proteamaculans 568 Asp/Glu racemase YP_001477149.1 1014294 D 399741 CDS YP_001477150.1 157369161 5604305 1015058..1015996 1 NC_009832.1 PFAM: polysaccharide deacetylase; KEGG: ypi:YpsIP31758_1058 polysaccharide deacetylase family protein; chitin deacetylase 1015996 5604305 Spro_0916 Serratia proteamaculans 568 chitin deacetylase YP_001477150.1 1015058 D 399741 CDS YP_001477151.1 157369162 5604390 complement(1016024..1016353) 1 NC_009832.1 KEGG: nmu:Nmul_D2814 transcriptional regulator, XRE family; XRE family transcriptional regulator 1016353 5604390 Spro_0917 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001477151.1 1016024 R 399741 CDS YP_001477152.1 157369163 5604391 complement(1016515..1018755) 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ypi:YpsIP31758_0710 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1018755 5604391 Spro_0918 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001477152.1 1016515 R 399741 CDS YP_001477153.1 157369164 5604392 complement(1018789..1020117) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0711 aerobactin siderophore biosynthesis protein IucD; L-lysine 6-monooxygenase (NADPH) 1020117 5604392 Spro_0919 Serratia proteamaculans 568 L-lysine 6-monooxygenase (NADPH) YP_001477153.1 1018789 R 399741 CDS YP_001477154.1 157369165 5604454 complement(1020114..1021862) 1 NC_009832.1 PFAM: IucA/IucC family protein; KEGG: ypp:YPDSF_0526 siderophore biosynthesis protein IucC; IucA/IucC family protein 1021862 5604454 Spro_0920 Serratia proteamaculans 568 IucA/IucC family protein YP_001477154.1 1020114 R 399741 CDS YP_001477155.1 157369166 5604455 complement(1021859..1022809) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0713 aerobactin siderophore biosynthesis protein IucB; aerobactin siderophore biosynthesis protein IucB 1022809 5604455 Spro_0921 Serratia proteamaculans 568 aerobactin siderophore biosynthesis protein IucB YP_001477155.1 1021859 R 399741 CDS YP_001477156.1 157369167 5604456 complement(1022806..1024551) 1 NC_009832.1 PFAM: IucA/IucC family protein; KEGG: ypi:YpsIP31758_0714 aerobactin siderophore biosynthesis protein IucA; IucA/IucC family protein 1024551 5604456 Spro_0922 Serratia proteamaculans 568 IucA/IucC family protein YP_001477156.1 1022806 R 399741 CDS YP_001477157.1 157369168 5603075 1024689..1025912 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypp:YPDSF_0530 membrane protein; major facilitator transporter 1025912 5603075 Spro_0923 Serratia proteamaculans 568 major facilitator transporter YP_001477157.1 1024689 D 399741 CDS YP_001477158.1 157369169 5603076 1025918..1026802 1 NC_009832.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: eca:ECA0065 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 1026802 5603076 Spro_0924 Serratia proteamaculans 568 FAD-binding 9 siderophore-interacting domain-containing protein YP_001477158.1 1025918 D 399741 CDS YP_001477159.1 157369170 5603077 complement(1026812..1027102) 1 NC_009832.1 PFAM: plasmid stabilization system; KEGG: plu:plu2306 hypothetical protein; plasmid stabilization system protein 1027102 5603077 Spro_0925 Serratia proteamaculans 568 plasmid stabilization system protein YP_001477159.1 1026812 R 399741 CDS YP_001477160.1 157369171 5604619 complement(1027090..1027368) 1 NC_009832.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: plu:plu2305 hypothetical protein; CopG family transcriptional regulator 1027368 5604619 Spro_0926 Serratia proteamaculans 568 CopG family transcriptional regulator YP_001477160.1 1027090 R 399741 CDS YP_001477161.1 157369172 5604620 complement(1027454..1027840) 1 NC_009832.1 KEGG: ypi:YpsIP31758_3195 hypothetical protein; hypothetical protein 1027840 5604620 Spro_0927 Serratia proteamaculans 568 hypothetical protein YP_001477161.1 1027454 R 399741 CDS YP_001477162.1 157369173 5604621 complement(1027844..1029244) 1 NC_009832.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 1029244 5604621 Spro_0928 Serratia proteamaculans 568 amidase YP_001477162.1 1027844 R 399741 CDS YP_001477163.1 157369174 5603553 complement(1029241..1029432) 1 NC_009832.1 KEGG: ypi:YpsIP31758_3193 hypothetical protein; hypothetical protein 1029432 5603553 Spro_0929 Serratia proteamaculans 568 hypothetical protein YP_001477163.1 1029241 R 399741 CDS YP_001477164.1 157369175 5603554 complement(1029458..1031044) 1 NC_009832.1 PFAM: gamma-glutamyltranspeptidase; KEGG: eca:ECA3497 putative gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1031044 5603554 Spro_0930 Serratia proteamaculans 568 gamma-glutamyltransferase YP_001477164.1 1029458 R 399741 CDS YP_001477165.1 157369176 5603555 1031190..1032029 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: eca:ECA3496 putative transcriptional regulator; RpiR family transcriptional regulator 1032029 5603555 Spro_0931 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001477165.1 1031190 D 399741 CDS YP_001477166.1 157369177 5604867 1032248..1033039 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: ypi:YpsIP31758_3190 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein 1033039 5604867 Spro_0932 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477166.1 1032248 D 399741 CDS YP_001477167.1 157369178 5604868 1033052..1033717 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3494 putative amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 1033717 5604868 Spro_0933 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477167.1 1033052 D 399741 CDS YP_001477168.1 157369179 5604969 1033717..1034373 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_3188 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 1034373 5604969 Spro_0934 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477168.1 1033717 D 399741 CDS YP_001477169.1 157369180 5604970 1034354..1035097 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3492 putative amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 1035097 5604970 Spro_0935 Serratia proteamaculans 568 ABC transporter-like protein YP_001477169.1 1034354 D 399741 CDS YP_001477170.1 157369181 5604971 1035141..1036382 1 NC_009832.1 PFAM: aminotransferase class V; KEGG: eca:ECA3491 purine catabolism protein; class V aminotransferase 1036382 5604971 Spro_0936 Serratia proteamaculans 568 class V aminotransferase YP_001477170.1 1035141 D 399741 CDS YP_001477171.1 157369182 5604978 1036382..1037638 1 NC_009832.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 1037638 5604978 Spro_0937 Serratia proteamaculans 568 allantoate amidohydrolase YP_001477171.1 1036382 D 399741 CDS YP_001477172.1 157369183 5604979 1037638..1038138 1 NC_009832.1 KEGG: nca:Noca_1144 putative urate oxidase, N-terminal; putative urate oxidase, N-terminal 1038138 5604979 Spro_0938 Serratia proteamaculans 568 putative urate oxidase, N-terminal YP_001477172.1 1037638 D 399741 CDS YP_001477173.1 157369184 5604980 1038131..1038466 1 NC_009832.1 PFAM: Transthyretin; KEGG: sen:SACE_6735 transthyretin; transthyretin 1038466 5604980 Spro_0939 Serratia proteamaculans 568 transthyretin YP_001477173.1 1038131 D 399741 CDS YP_001477174.1 157369185 5605017 complement(1038512..1039285) 1 NC_009832.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ypi:YpsIP31758_3184 hydrolase, carbon-nitrogen family; hypothetical protein 1039285 5605017 Spro_0940 Serratia proteamaculans 568 hypothetical protein YP_001477174.1 1038512 R 399741 CDS YP_001477175.1 157369186 5605018 complement(1039273..1040433) 1 NC_009832.1 catalyzes the transfer of an amino moiety; putative aminotransferase 1040433 5605018 Spro_0941 Serratia proteamaculans 568 putative aminotransferase YP_001477175.1 1039273 R 399741 CDS YP_001477176.1 157369187 5605019 1040588..1041208 1 NC_009832.1 catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 1041208 5605019 Spro_0942 Serratia proteamaculans 568 methylthioribulose-1-phosphate dehydratase YP_001477176.1 1040588 D 399741 CDS YP_001477177.1 157369188 5605062 1041205..1041894 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA3486 enolase-phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 1041894 5605062 Spro_0943 Serratia proteamaculans 568 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001477177.1 1041205 D 399741 CDS YP_001477178.1 157369189 5605063 1041891..1042433 1 NC_009832.1 PFAM: Acireductone dioxygenase ARD; KEGG: yen:YE3231 dioxygenase; acireductone dioxygenase ARD 1042433 5605063 Spro_0944 Serratia proteamaculans 568 acireductone dioxygenase ARD YP_001477178.1 1041891 D 399741 CDS YP_001477179.1 157369190 5605064 complement(1042451..1043479) 1 NC_009832.1 KEGG: eca:ECA3477 methylthioribose-1-phosphate isomerase; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein 1043479 5605064 Spro_0945 Serratia proteamaculans 568 eIF-2B alpha/beta/delta-like protein YP_001477179.1 1042451 R 399741 CDS YP_001477180.1 157369191 5603764 1043623..1044822 1 NC_009832.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 1044822 mtnK 5603764 mtnK Serratia proteamaculans 568 methylthioribose kinase YP_001477180.1 1043623 D 399741 CDS YP_001477181.1 157369192 5603765 complement(1044908..1045060) 1 NC_009832.1 PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein 1045060 5603765 Spro_0947 Serratia proteamaculans 568 Hok/gef cell toxic protein YP_001477181.1 1044908 R 399741 CDS YP_001477182.1 157369193 5603766 complement(1045412..1045564) 1 NC_009832.1 PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein 1045564 5603766 Spro_0948 Serratia proteamaculans 568 Hok/gef cell toxic protein YP_001477182.1 1045412 R 399741 CDS YP_001477183.1 157369194 5605087 complement(1045853..1048309) 1 NC_009832.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1048309 fadE 5605087 fadE Serratia proteamaculans 568 acyl-CoA dehydrogenase YP_001477183.1 1045853 R 399741 CDS YP_001477184.1 157369195 5605088 1048555..1049136 1 NC_009832.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1049136 gmhA 5605088 gmhA Serratia proteamaculans 568 phosphoheptose isomerase YP_001477184.1 1048555 D 399741 CDS YP_001477185.1 157369196 5603694 1049234..1050040 1 NC_009832.1 PFAM: glutamine amidotransferase class-II; KEGG: yps:YPTB0885 hypothetical protein; glutamine amidotransferase class-II 1050040 5603694 Spro_0951 Serratia proteamaculans 568 glutamine amidotransferase class-II YP_001477185.1 1049234 D 399741 CDS YP_001477186.1 157369197 5603695 complement(1049972..1050742) 1 NC_009832.1 PFAM: protein of unknown function DUF949; KEGG: ypi:YpsIP31758_3169 hypothetical protein; hypothetical protein 1050742 5603695 Spro_0952 Serratia proteamaculans 568 hypothetical protein YP_001477186.1 1049972 R 399741 CDS YP_001477187.1 157369198 5603696 1051227..1052576 1 NC_009832.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1052576 5603696 Spro_0953 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit A YP_001477187.1 1051227 D 399741 CDS YP_001477188.1 157369199 5604169 1052580..1053821 1 NC_009832.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1053821 5604169 Spro_0954 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit B YP_001477188.1 1052580 D 399741 CDS YP_001477189.1 157369200 5604170 1053811..1054605 1 NC_009832.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1054605 5604170 Spro_0955 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit C YP_001477189.1 1053811 D 399741 CDS YP_001477190.1 157369201 5604171 1054598..1055227 1 NC_009832.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1055227 5604171 Spro_0956 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit D YP_001477190.1 1054598 D 399741 CDS YP_001477191.1 157369202 5605181 1055234..1055830 1 NC_009832.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1055830 5605181 Spro_0957 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit E YP_001477191.1 1055234 D 399741 CDS YP_001477192.1 157369203 5605182 1055846..1057069 1 NC_009832.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1057069 5605182 Spro_0958 Serratia proteamaculans 568 Na(+)-translocating NADH-quinone reductase subunit F YP_001477192.1 1055846 D 399741 CDS YP_001477193.1 157369204 5605183 1057070..1058101 1 NC_009832.1 PFAM: ApbE family lipoprotein; KEGG: yen:YE3214 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 1058101 5605183 Spro_0959 Serratia proteamaculans 568 ApbE family lipoprotein YP_001477193.1 1057070 D 399741 CDS YP_001477194.1 157369205 5605307 1058109..1058336 1 NC_009832.1 PFAM: protein of unknown function DUF539; KEGG: yen:YE3213 hypothetical protein; hypothetical protein 1058336 5605307 Spro_0960 Serratia proteamaculans 568 hypothetical protein YP_001477194.1 1058109 D 399741 CDS YP_001477195.1 157369206 5605308 complement(1058384..1059268) 1 NC_009832.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: kpn:KPN_00246 hypothetical protein; glycerophosphoryl diester phosphodiesterase 1059268 5605308 Spro_0961 Serratia proteamaculans 568 glycerophosphoryl diester phosphodiesterase YP_001477195.1 1058384 R 399741 CDS YP_001477196.1 157369207 5605309 1059466..1060527 1 NC_009832.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1060527 5605309 Spro_0962 Serratia proteamaculans 568 DNA polymerase IV YP_001477196.1 1059466 D 399741 CDS YP_001477197.1 157369208 5603112 complement(1060583..1062043) 1 NC_009832.1 KEGG: yen:YE3206 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 1062043 5603112 Spro_0963 Serratia proteamaculans 568 aminoacyl-histidine dipeptidase YP_001477197.1 1060583 R 399741 CDS YP_001477198.1 157369209 5603113 1062368..1062826 1 NC_009832.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1062826 5603113 Spro_0964 Serratia proteamaculans 568 xanthine-guanine phosphoribosyltransferase YP_001477198.1 1062368 D 399741 CDS YP_001477199.1 157369210 5603114 1063004..1064251 1 NC_009832.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 1064251 frsA 5603114 frsA Serratia proteamaculans 568 fermentation/respiration switch protein YP_001477199.1 1063004 D 399741 CDS YP_001477200.1 157369211 5603744 1064311..1064712 1 NC_009832.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 1064712 5603744 Spro_0966 Serratia proteamaculans 568 DNA-binding transcriptional regulator Crl YP_001477200.1 1064311 D 399741 CDS YP_001477201.1 157369212 5603745 1064828..1065931 1 NC_009832.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1065931 5603745 Spro_0967 Serratia proteamaculans 568 gamma-glutamyl kinase YP_001477201.1 1064828 D 399741 CDS YP_001477202.1 157369213 5605339 1065941..1067194 1 NC_009832.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1067194 proA 5605339 proA Serratia proteamaculans 568 gamma-glutamyl phosphate reductase YP_001477202.1 1065941 D 399741 CDS YP_001477203.1 157369214 5605340 complement(1067412..1067882) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stm:STM3653 putative acetyltransferase; GCN5-like N-acetyltransferase 1067882 5605340 Spro_0969 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477203.1 1067412 R 399741 CDS YP_001477204.1 157369215 5605341 complement(1068134..1068373) 1 NC_009832.1 hypothetical protein 1068373 5605341 Spro_0970 Serratia proteamaculans 568 hypothetical protein YP_001477204.1 1068134 R 399741 CDS YP_001477205.1 157369216 5603005 complement(1068535..1069074) 1 NC_009832.1 KEGG: eca:ECA3962 hypothetical protein; hypothetical protein 1069074 5603005 Spro_0971 Serratia proteamaculans 568 hypothetical protein YP_001477205.1 1068535 R 399741 CDS YP_001477206.1 157369217 5603006 complement(1069458..1069982) 1 NC_009832.1 PFAM: cytochrome B561; KEGG: eca:ECA0823 cytochrome B561; cytochrome B561 1069982 5603006 Spro_0972 Serratia proteamaculans 568 cytochrome B561 YP_001477206.1 1069458 R 399741 CDS YP_001477207.1 157369218 5603007 complement(1070100..1071698) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_01918 dipeptide transport protein; extracellular solute-binding protein 1071698 5603007 Spro_0973 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477207.1 1070100 R 399741 CDS YP_001477208.1 157369219 5605398 1072185..1073531 1 NC_009832.1 PFAM: condensation domain protein; KEGG: bme:BMEII0076 enterobactin synthetase component F; condensation domain-containing protein 1073531 5605398 Spro_0974 Serratia proteamaculans 568 condensation domain-containing protein YP_001477208.1 1072185 D 399741 CDS YP_001477209.1 157369220 5605400 1078899..1081022 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vvy:VVA1309 ferric vulnibactin outer membrane receptor; TonB-dependent siderophore receptor 1081022 5605400 Spro_0977 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001477209.1 1078899 D 399741 CDS YP_001477210.1 157369221 5605435 1081087..1084047 1 NC_009832.1 PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: vvu:VV2_0830 non-ribosomal peptide synthetase modules; condensation domain-containing protein 1084047 5605435 Spro_0978 Serratia proteamaculans 568 condensation domain-containing protein YP_001477210.1 1081087 D 399741 CDS YP_001477211.1 157369222 5605436 1084094..1085326 1 NC_009832.1 KEGG: kpn:KPN_01908 putative receptor; hypothetical protein 1085326 5605436 Spro_0979 Serratia proteamaculans 568 hypothetical protein YP_001477211.1 1084094 D 399741 CDS YP_001477212.1 157369223 5605437 1085532..1086116 1 NC_009832.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ent:Ent638_2072 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 1086116 5605437 Spro_0980 Serratia proteamaculans 568 flavin reductase domain-containing protein YP_001477212.1 1085532 D 399741 CDS YP_001477213.1 157369224 5605506 complement(1086201..1086554) 1 NC_009832.1 hypothetical protein 1086554 5605506 Spro_0981 Serratia proteamaculans 568 hypothetical protein YP_001477213.1 1086201 R 399741 CDS YP_001477214.1 157369225 5605507 complement(1086781..1087029) 1 NC_009832.1 hypothetical protein 1087029 5605507 Spro_0982 Serratia proteamaculans 568 hypothetical protein YP_001477214.1 1086781 R 399741 CDS YP_001477215.1 157369226 5605508 1087251..1087892 1 NC_009832.1 PFAM: DSBA oxidoreductase; KEGG: sgl:SG2236 thiol:disulfide interchange protein; DSBA oxidoreductase 1087892 5605508 Spro_0983 Serratia proteamaculans 568 DSBA oxidoreductase YP_001477215.1 1087251 D 399741 CDS YP_001477216.1 157369227 5605626 1088084..1088992 1 NC_009832.1 activator of genes involved in phenylacetic acid catabolism; DNA-binding transcriptional activator FeaR 1088992 5605626 Spro_0984 Serratia proteamaculans 568 DNA-binding transcriptional activator FeaR YP_001477216.1 1088084 D 399741 CDS YP_001477217.1 157369228 5605627 complement(1089029..1090528) 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_01455 phenylacetaldehyde dehydrogenase; phenylacetaldehyde dehydrogenase 1090528 5605627 Spro_0985 Serratia proteamaculans 568 phenylacetaldehyde dehydrogenase YP_001477217.1 1089029 R 399741 CDS YP_001477218.1 157369229 5605651 complement(1090673..1091350) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aha:AHA_0057 lysine exporter protein; leucine export protein LeuE 1091350 5605651 Spro_0986 Serratia proteamaculans 568 leucine export protein LeuE YP_001477218.1 1090673 R 399741 CDS YP_001477219.1 157369230 5605652 complement(1091465..1092325) 1 NC_009832.1 with TehA confers resistance to tellurite; tellurite resistance protein TehB 1092325 5605652 Spro_0987 Serratia proteamaculans 568 tellurite resistance protein TehB YP_001477219.1 1091465 R 399741 CDS YP_001477220.1 157369231 5605653 1092532..1093635 1 NC_009832.1 PFAM: protein of unknown function DUF1615; KEGG: eca:ECA0433 putative lipoprotein; hypothetical protein 1093635 5605653 Spro_0988 Serratia proteamaculans 568 hypothetical protein YP_001477220.1 1092532 D 399741 CDS YP_001477221.1 157369232 5604289 complement(1093632..1094240) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: bxe:Bxe_A4031 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 1094240 5604289 Spro_0989 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001477221.1 1093632 R 399741 CDS YP_001477222.1 157369233 5604290 complement(1094256..1095152) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: sen:SACE_1904 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein 1095152 5604290 Spro_0990 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001477222.1 1094256 R 399741 CDS YP_001477223.1 157369234 5604291 1095181..1096089 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rsq:Rsph17025_3347 hypothetical protein; LysR family transcriptional regulator 1096089 5604291 Spro_0991 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477223.1 1095181 D 399741 CDS YP_001477224.1 157369235 5605833 complement(1096106..1097782) 1 NC_009832.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_B0109 putative pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 1097782 5605833 Spro_0992 Serratia proteamaculans 568 thiamine pyrophosphate binding domain-containing protein YP_001477224.1 1096106 R 399741 CDS YP_001477225.1 157369236 5605834 1098585..1099178 1 NC_009832.1 catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 1099178 pagP 5605834 pagP Serratia proteamaculans 568 palmitoyl transferase YP_001477225.1 1098585 D 399741 CDS YP_001477226.1 157369237 5605835 1099415..1099900 1 NC_009832.1 KEGG: yen:YE0521 hypothetical protein; hypothetical protein 1099900 5605835 Spro_0994 Serratia proteamaculans 568 hypothetical protein YP_001477226.1 1099415 D 399741 CDS YP_001477227.1 157369238 5605940 1099960..1100223 1 NC_009832.1 PFAM: protein of unknown function DUF333; KEGG: sfx:S1546 hypothetical protein; hypothetical protein 1100223 5605940 Spro_0995 Serratia proteamaculans 568 hypothetical protein YP_001477227.1 1099960 D 399741 CDS YP_001477228.1 157369239 5605941 complement(1100233..1100850) 1 NC_009832.1 KEGG: psb:Psyr_4917 heat shock protein DnaJ, N-terminal; hypothetical protein 1100850 5605941 Spro_0996 Serratia proteamaculans 568 hypothetical protein YP_001477228.1 1100233 R 399741 CDS YP_001477229.1 157369240 5605942 1101074..1101886 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rsp:RSP_3064 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1101886 5605942 Spro_0997 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001477229.1 1101074 D 399741 CDS YP_001477230.1 157369241 5605988 1101888..1102271 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ent:Ent638_0487 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1102271 5605988 Spro_0998 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001477230.1 1101888 D 399741 CDS YP_001477231.1 157369242 5605989 complement(1102272..1103180) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1922 transcriptional regulator, LysR-family; LysR family transcriptional regulator 1103180 5605989 Spro_0999 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477231.1 1102272 R 399741 CDS YP_001477232.1 157369243 5605990 1103307..1104188 1 NC_009832.1 PFAM: Pirin domain protein; KEGG: bte:BTH_I1747 pirin family protein; pirin domain-containing protein 1104188 5605990 Spro_1000 Serratia proteamaculans 568 pirin domain-containing protein YP_001477232.1 1103307 D 399741 CDS YP_001477233.1 157369244 5602629 1104328..1104954 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_4072 hydrolase, isochorismatase family; isochorismatase hydrolase 1104954 5602629 Spro_1001 Serratia proteamaculans 568 isochorismatase hydrolase YP_001477233.1 1104328 D 399741 CDS YP_001477234.1 157369245 5602630 1105129..1105461 1 NC_009832.1 KEGG: kpn:KPN_02155 hypothetical protein; hypothetical protein 1105461 5602630 Spro_1002 Serratia proteamaculans 568 hypothetical protein YP_001477234.1 1105129 D 399741 CDS YP_001477235.1 157369246 5606112 1105525..1105968 1 NC_009832.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: pfl:PFL_2261 protein of unknown function, DUF393 family; putative thiol-disulfide oxidoreductase DCC 1105968 5606112 Spro_1003 Serratia proteamaculans 568 putative thiol-disulfide oxidoreductase DCC YP_001477235.1 1105525 D 399741 CDS YP_001477236.1 157369247 5606113 1106064..1106321 1 NC_009832.1 KEGG: ypi:YpsIP31758_3147 hypothetical protein; hypothetical protein 1106321 5606113 Spro_1004 Serratia proteamaculans 568 hypothetical protein YP_001477236.1 1106064 D 399741 CDS YP_001477237.1 157369248 5606114 complement(1106315..1106866) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_3320 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 1106866 5606114 Spro_1005 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477237.1 1106315 R 399741 CDS YP_001477238.1 157369249 5606174 complement(1106967..1107719) 1 NC_009832.1 KEGG: pap:PSPA7_1156 hypothetical protein; putative periplasmic ligand-binding sensor protein 1107719 5606174 Spro_1006 Serratia proteamaculans 568 putative periplasmic ligand-binding sensor protein YP_001477238.1 1106967 R 399741 CDS YP_001477239.1 157369250 5606175 complement(1107846..1108700) 1 NC_009832.1 SMART: helix-turn-helix domain protein; KEGG: eca:ECA3469 putative DNA-binding protein; XRE family transcriptional regulator 1108700 5606175 Spro_1007 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001477239.1 1107846 R 399741 CDS YP_001477240.1 157369251 5606176 1108749..1109519 1 NC_009832.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: yen:YE3193 hypothetical protein; type 11 methyltransferase 1109519 5606176 Spro_1008 Serratia proteamaculans 568 type 11 methyltransferase YP_001477240.1 1108749 D 399741 CDS YP_001477241.1 157369252 5606198 complement(1109619..1110314) 1 NC_009832.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 1110314 5606198 Spro_1009 Serratia proteamaculans 568 aquaporin Z YP_001477241.1 1109619 R 399741 CDS YP_001477242.1 157369253 5606199 1110764..1112128 1 NC_009832.1 KEGG: eca:ECA0924 hypothetical protein; hypothetical protein 1112128 5606199 Spro_1010 Serratia proteamaculans 568 hypothetical protein YP_001477242.1 1110764 D 399741 CDS YP_001477243.1 157369254 5606200 complement(1112389..1113570) 1 NC_009832.1 PFAM: low temperature requirement A; KEGG: oan:Oant_2126 low temperature requirement A; low temperature requirement A 1113570 5606200 Spro_1011 Serratia proteamaculans 568 low temperature requirement A YP_001477243.1 1112389 R 399741 CDS YP_001477244.1 157369255 5606207 1113880..1114164 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE3192 hypothetical protein; hypothetical protein 1114164 5606207 Spro_1012 Serratia proteamaculans 568 hypothetical protein YP_001477244.1 1113880 D 399741 CDS YP_001477245.1 157369256 5606208 1114406..1114963 1 NC_009832.1 KEGG: ypp:YPDSF_2845 methyltransferase; methyltransferase 1114963 5606208 Spro_1013 Serratia proteamaculans 568 methyltransferase YP_001477245.1 1114406 D 399741 CDS YP_001477246.1 157369257 5606209 complement(1114964..1115425) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_1313 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1115425 5606209 Spro_1014 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477246.1 1114964 R 399741 CDS YP_001477247.1 157369258 5606224 1115646..1116761 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: yen:YE3190 hypothetical protein; periplasmic binding protein 1116761 5606224 Spro_1015 Serratia proteamaculans 568 periplasmic binding protein YP_001477247.1 1115646 D 399741 CDS YP_001477248.1 157369259 5606225 1116754..1118877 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE3189 putative hydroxamate-type ferrisiderophore receptor; TonB-dependent siderophore receptor 1118877 5606225 Spro_1016 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001477248.1 1116754 D 399741 CDS YP_001477249.1 157369260 5606226 1118967..1119485 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_2969 probable acetyltransferase; GCN5-like N-acetyltransferase 1119485 5606226 Spro_1017 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477249.1 1118967 D 399741 CDS YP_001477250.1 157369261 5603038 1119602..1120126 1 NC_009832.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase II 1120126 aroL 5603038 aroL Serratia proteamaculans 568 shikimate kinase II YP_001477250.1 1119602 D 399741 CDS YP_001477251.1 157369262 5603039 complement(1120146..1120919) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1773 transcriptional regulator, AraC family; AraC family transcriptional regulator 1120919 5603039 Spro_1019 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001477251.1 1120146 R 399741 CDS YP_001477252.1 157369263 5606400 1121020..1121424 1 NC_009832.1 KEGG: cvi:CV_3714 hypothetical protein; hypothetical protein 1121424 5606400 Spro_1020 Serratia proteamaculans 568 hypothetical protein YP_001477252.1 1121020 D 399741 CDS YP_001477253.1 157369264 5606401 1121543..1121671 1 NC_009832.1 KEGG: kpn:KPN_00333 hypothetical protein; hypothetical protein 1121671 5606401 Spro_1021 Serratia proteamaculans 568 hypothetical protein YP_001477253.1 1121543 D 399741 CDS YP_001477254.1 157369265 5606402 1121975..1122748 1 NC_009832.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:bll3245 transcriptional regulatory protein; IclR family transcriptional regulator 1122748 5606402 Spro_1022 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001477254.1 1121975 D 399741 CDS YP_001477255.1 157369266 5606436 1122935..1124509 1 NC_009832.1 PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: vei:Veis_1103 oligopeptide transporter OPT superfamily protein; oligopeptide transporter OPT superfamily protein 1124509 5606436 Spro_1023 Serratia proteamaculans 568 oligopeptide transporter OPT superfamily protein YP_001477255.1 1122935 D 399741 CDS YP_001477256.1 157369267 5606437 1124542..1125471 1 NC_009832.1 PFAM: protein of unknown function DUF1177; KEGG: vei:Veis_1102 protein of unknown function DUF1177; hypothetical protein 1125471 5606437 Spro_1024 Serratia proteamaculans 568 hypothetical protein YP_001477256.1 1124542 D 399741 CDS YP_001477257.1 157369268 5606438 1125476..1126153 1 NC_009832.1 PFAM: AroM family protein; KEGG: ssn:SSON_0366 protein of aro operon, regulated by AroR; hypothetical protein 1126153 5606438 Spro_1025 Serratia proteamaculans 568 hypothetical protein YP_001477257.1 1125476 D 399741 CDS YP_001477258.1 157369269 5606476 1126365..1126655 1 NC_009832.1 PFAM: protein of unknown function DUF1255; KEGG: ypi:YpsIP31758_3142 hypothetical protein; hypothetical protein 1126655 5606476 Spro_1026 Serratia proteamaculans 568 hypothetical protein YP_001477258.1 1126365 D 399741 CDS YP_001477259.1 157369270 5606477 complement(1127367..1128278) 1 NC_009832.1 Required for efficient pilin antigenic variation; recombination associated protein 1128278 rdgC 5606477 rdgC Serratia proteamaculans 568 recombination associated protein YP_001477259.1 1127367 R 399741 CDS YP_001477260.1 157369271 5606478 complement(1128367..1130979) 1 NC_009832.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: ypi:YpsIP31758_4031 sensory box histidine kinase/response regulator; multi-sensor hybrid histidine kinase 1130979 5606478 Spro_1028 Serratia proteamaculans 568 multi-sensor hybrid histidine kinase YP_001477260.1 1128367 R 399741 CDS YP_001477261.1 157369272 5606499 1131121..1132641 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_0289 ABC transporter related; ABC transporter-like protein 1132641 5606499 Spro_1029 Serratia proteamaculans 568 ABC transporter-like protein YP_001477261.1 1131121 D 399741 CDS YP_001477262.1 157369273 5606500 1132634..1133659 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: kpn:KPN_04488 putative carbohydrate ABC transport system permease; monosaccharide-transporting ATPase 1133659 5606500 Spro_1030 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001477262.1 1132634 D 399741 CDS YP_001477263.1 157369274 5606501 1133759..1134703 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_04487 D-ribose periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 1134703 5606501 Spro_1031 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001477263.1 1133759 D 399741 CDS YP_001477264.1 157369275 5602728 1134767..1135453 1 NC_009832.1 PFAM: protein of unknown function DUF1498; KEGG: yps:YPTB3804 hypothetical protein; hypothetical protein 1135453 5602728 Spro_1032 Serratia proteamaculans 568 hypothetical protein YP_001477264.1 1134767 D 399741 CDS YP_001477265.1 157369276 5602729 1135465..1136325 1 NC_009832.1 KEGG: ypi:YpsIP31758_4026 putative fructose-bisphosphate aldolase; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; hypothetical protein 1136325 5602729 Spro_1033 Serratia proteamaculans 568 hypothetical protein YP_001477265.1 1135465 D 399741 CDS YP_001477266.1 157369277 5602730 1136325..1137338 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: yps:YPTB3802 PfkB family carbohydrate kinase; ribokinase-like domain-containing protein 1137338 5602730 Spro_1034 Serratia proteamaculans 568 ribokinase-like domain-containing protein YP_001477266.1 1136325 D 399741 CDS YP_001477267.1 157369278 5606549 complement(1137313..1138053) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ent:Ent638_0283 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1138053 5606549 Spro_1035 Serratia proteamaculans 568 two component transcriptional regulator YP_001477267.1 1137313 R 399741 CDS YP_001477268.1 157369279 5606550 1138264..1139172 1 NC_009832.1 PFAM: ROK family protein; KEGG: kpn:KPN_00337 possible NAGC-like transcriptional regulator; ROK family protein 1139172 5606550 Spro_1036 Serratia proteamaculans 568 ROK family protein YP_001477268.1 1138264 D 399741 CDS YP_001477269.1 157369280 5606583 1139278..1139511 1 NC_009832.1 KEGG: ypi:YpsIP31758_3738 prevent-host-death family protein; prevent-host-death family protein 1139511 5606583 Spro_1037 Serratia proteamaculans 568 prevent-host-death family protein YP_001477269.1 1139278 D 399741 CDS YP_001477270.1 157369281 5606584 1139508..1139894 1 NC_009832.1 PFAM: PilT protein domain protein; KEGG: nmc:NMC1584 hypothetical protein; PilT domain-containing protein 1139894 5606584 Spro_1038 Serratia proteamaculans 568 PilT domain-containing protein YP_001477270.1 1139508 D 399741 CDS YP_001477271.1 157369282 5606585 complement(1139974..1143225) 1 NC_009832.1 TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; KEGG: ypp:YPDSF_2840 hypothetical protein; exonuclease SbcC 1143225 5606585 Spro_1039 Serratia proteamaculans 568 exonuclease SbcC YP_001477271.1 1139974 R 399741 CDS YP_001477272.1 157369283 5606599 complement(1143222..1144454) 1 NC_009832.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease subunit SbcD 1144454 5606599 Spro_1040 Serratia proteamaculans 568 exonuclease subunit SbcD YP_001477272.1 1143222 R 399741 CDS YP_001477273.1 157369284 5606600 1144656..1145345 1 NC_009832.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ypi:YpsIP31758_3136 phosphate regulon transcriptional regulatory protein PhoB; two component transcriptional regulator 1145345 5606600 Spro_1041 Serratia proteamaculans 568 two component transcriptional regulator YP_001477273.1 1144656 D 399741 CDS YP_001477274.1 157369285 5606601 1145370..1146686 1 NC_009832.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 1146686 phoR 5606601 phoR Serratia proteamaculans 568 phosphate regulon sensor protein YP_001477274.1 1145370 D 399741 CDS YP_001477275.1 157369286 5602570 1146703..1147641 1 NC_009832.1 TIGRFAM: phosphate binding protein; KEGG: eca:ECA1112 putative phosphate binding protein; phosphate binding protein 1147641 5602570 Spro_1043 Serratia proteamaculans 568 phosphate binding protein YP_001477275.1 1146703 D 399741 CDS YP_001477276.1 157369287 5602571 1147850..1148956 1 NC_009832.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1148956 5602571 Spro_1044 Serratia proteamaculans 568 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_001477276.1 1147850 D 399741 CDS YP_001477277.1 157369288 5602572 1149404..1150723 1 NC_009832.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: yen:YE3179 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1150723 5602572 Spro_1045 Serratia proteamaculans 568 branched-chain amino acid transport system II carrier protein YP_001477277.1 1149404 D 399741 CDS YP_001477278.1 157369289 5606085 1150795..1152201 1 NC_009832.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; putative proline-specific permease 1152201 proY 5606085 proY Serratia proteamaculans 568 putative proline-specific permease YP_001477278.1 1150795 D 399741 CDS YP_001477279.1 157369290 5606086 complement(1152424..1152687) 1 NC_009832.1 hypothetical protein 1152687 5606086 Spro_1047 Serratia proteamaculans 568 hypothetical protein YP_001477279.1 1152424 R 399741 CDS YP_001477280.1 157369291 5606087 complement(1152819..1154084) 1 NC_009832.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ypi:YpsIP31758_1534 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel MscS 1154084 5606087 Spro_1048 Serratia proteamaculans 568 mechanosensitive ion channel MscS YP_001477280.1 1152819 R 399741 CDS YP_001477281.1 157369292 5606692 1154333..1156156 1 NC_009832.1 PFAM: glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: yen:YE3177 putative maltodextrin glucosidase; maltodextrin glucosidase 1156156 5606692 Spro_1049 Serratia proteamaculans 568 maltodextrin glucosidase YP_001477281.1 1154333 D 399741 CDS YP_001477282.1 157369293 5606693 complement(1156173..1156664) 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1156664 5606693 Spro_1050 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001477282.1 1156173 R 399741 CDS YP_001477283.1 157369294 5606694 complement(1156692..1157216) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 1157216 5606694 Spro_1051 Serratia proteamaculans 568 fimbrial protein YP_001477283.1 1156692 R 399741 CDS YP_001477284.1 157369295 5606703 complement(1157231..1158268) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: ent:Ent638_1072 fimbrial protein; fimbrial protein 1158268 5606703 Spro_1052 Serratia proteamaculans 568 fimbrial protein YP_001477284.1 1157231 R 399741 CDS YP_001477285.1 157369296 5606704 complement(1158265..1160778) 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher; fimbrial biogenesis outer membrane usher protein 1160778 5606704 Spro_1053 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001477285.1 1158265 R 399741 CDS YP_001477286.1 157369297 5606734 complement(1160811..1161515) 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone; pili assembly chaperone 1161515 5606734 Spro_1054 Serratia proteamaculans 568 pili assembly chaperone YP_001477286.1 1160811 R 399741 CDS YP_001477287.1 157369298 5606735 complement(1161570..1162151) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 1162151 5606735 Spro_1055 Serratia proteamaculans 568 fimbrial protein YP_001477287.1 1161570 R 399741 CDS YP_001477288.1 157369299 5606736 complement(1162537..1163130) 1 NC_009832.1 PFAM: integrase family protein; KEGG: ecv:APECO1_1681 hypothetical protein; integrase family protein 1163130 5606736 Spro_1056 Serratia proteamaculans 568 integrase family protein YP_001477288.1 1162537 R 399741 CDS YP_001477289.1 157369300 5606748 complement(1163245..1165008) 1 NC_009832.1 KEGG: yen:YE3175 gamma-glutamyltranspeptidase precursor; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1165008 5606748 Spro_1057 Serratia proteamaculans 568 gamma-glutamyltransferase YP_001477289.1 1163245 R 399741 CDS YP_001477290.1 157369301 5606749 complement(1165239..1165841) 1 NC_009832.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ypi:YpsIP31758_3126 antioxidant, AhpC/TSA family; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1165841 5606749 Spro_1058 Serratia proteamaculans 568 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001477290.1 1165239 R 399741 CDS YP_001477291.1 157369302 5606750 complement(1166071..1166652) 1 NC_009832.1 PFAM: protein of unknown function DUF479; KEGG: yen:YE3173 hypothetical protein; (Acyl-carrier-protein) phosphodiesterase 1166652 5606750 Spro_1059 Serratia proteamaculans 568 (Acyl-carrier-protein) phosphodiesterase YP_001477291.1 1166071 R 399741 CDS YP_001477292.1 157369303 5606758 1166773..1167843 1 NC_009832.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1167843 queA 5606758 queA Serratia proteamaculans 568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001477292.1 1166773 D 399741 CDS YP_001477293.1 157369304 5606759 1167916..1169040 1 NC_009832.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1169040 tgt 5606759 tgt Serratia proteamaculans 568 queuine tRNA-ribosyltransferase YP_001477293.1 1167916 D 399741 CDS YP_001477294.1 157369305 5606760 1169074..1169406 1 NC_009832.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1169406 yajC 5606760 yajC Serratia proteamaculans 568 preprotein translocase subunit YajC YP_001477294.1 1169074 D 399741 CDS YP_001477295.1 157369306 5606770 1169432..1171279 1 NC_009832.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1171279 secD 5606770 secD Serratia proteamaculans 568 preprotein translocase subunit SecD YP_001477295.1 1169432 D 399741 CDS YP_001477296.1 157369307 5606771 1171290..1172258 1 NC_009832.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1172258 secF 5606771 secF Serratia proteamaculans 568 preprotein translocase subunit SecF YP_001477296.1 1171290 D 399741 CDS YP_001477297.1 157369308 5606772 complement(1172318..1172938) 1 NC_009832.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: stm:STM1387 response regulator; two component LuxR family transcriptional regulator 1172938 5606772 Spro_1065 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001477297.1 1172318 R 399741 CDS YP_001477298.1 157369309 5606776 complement(1172913..1174670) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: yen:YE1614 tetrathionate reductase complex: sensory transduction histidine kinase; histidine kinase 1174670 5606776 Spro_1066 Serratia proteamaculans 568 histidine kinase YP_001477298.1 1172913 R 399741 CDS YP_001477299.1 157369310 5606777 1174824..1175558 1 NC_009832.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: yen:YE1615 tetrathionate reductase subunit B; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1175558 5606777 Spro_1067 Serratia proteamaculans 568 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001477299.1 1174824 D 399741 CDS YP_001477300.1 157369311 5606778 1175555..1176613 1 NC_009832.1 PFAM: Polysulphide reductase NrfD; KEGG: yen:YE1616 tetrathionate reductase subunit C; polysulfide reductase NrfD 1176613 5606778 Spro_1068 Serratia proteamaculans 568 polysulfide reductase NrfD YP_001477300.1 1175555 D 399741 CDS YP_001477301.1 157369312 5606825 1176606..1179689 1 NC_009832.1 PFAM: molydopterin dinucleotide-binding region; KEGG: yen:YE1617 tetrathionate reductase subunit A; molydopterin dinucleotide-binding region 1179689 5606825 Spro_1069 Serratia proteamaculans 568 molydopterin dinucleotide-binding region YP_001477301.1 1176606 D 399741 CDS YP_001477302.1 157369313 5606826 complement(1179735..1180289) 1 NC_009832.1 KEGG: eca:ECA1124 putative lipoprotein; hypothetical protein 1180289 5606826 Spro_1070 Serratia proteamaculans 568 hypothetical protein YP_001477302.1 1179735 R 399741 CDS YP_001477303.1 157369314 5606849 1180477..1180926 1 NC_009832.1 PFAM: ATP-cone domain protein; KEGG: ypi:YpsIP31758_3118 transcriptional regulator, NrdR family; transcriptional regulator NrdR 1180926 nrdR 5606849 nrdR Serratia proteamaculans 568 transcriptional regulator NrdR YP_001477303.1 1180477 D 399741 CDS YP_001477304.1 157369315 5606850 1180937..1182046 1 NC_009832.1 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 1182046 ribD 5606850 ribD Serratia proteamaculans 568 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_001477304.1 1180937 D 399741 CDS YP_001477305.1 157369316 5606851 1182166..1182636 1 NC_009832.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1182636 ribH 5606851 ribH Serratia proteamaculans 568 6,7-dimethyl-8-ribityllumazine synthase YP_001477305.1 1182166 D 399741 CDS YP_001477306.1 157369317 5605253 1182657..1183073 1 NC_009832.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1183073 nusB 5605253 nusB Serratia proteamaculans 568 transcription antitermination protein NusB YP_001477306.1 1182657 D 399741 CDS YP_001477307.1 157369318 5605254 1183126..1184109 1 NC_009832.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1184109 5605254 Spro_1075 Serratia proteamaculans 568 thiamine monophosphate kinase YP_001477307.1 1183126 D 399741 CDS YP_001477308.1 157369319 5605255 1184111..1184605 1 NC_009832.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 1184605 5605255 Spro_1076 Serratia proteamaculans 568 phosphatidylglycerophosphatase A YP_001477308.1 1184111 D 399741 CDS YP_001477309.1 157369320 5606887 complement(1184649..1185623) 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: ecp:ECP_0478 putative oxidoreductase; aldo/keto reductase 1185623 5606887 Spro_1077 Serratia proteamaculans 568 aldo/keto reductase YP_001477309.1 1184649 R 399741 CDS YP_001477310.1 157369321 5606888 complement(1185731..1187596) 1 NC_009832.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1187596 5606888 Spro_1078 Serratia proteamaculans 568 1-deoxy-D-xylulose-5-phosphate synthase YP_001477310.1 1185731 R 399741 CDS YP_001477311.1 157369322 5606889 complement(1187631..1188551) 1 NC_009832.1 PFAM: Polyprenyl synthetase; KEGG: yen:YE3154 geranyltranstransferase; geranyltranstransferase 1188551 5606889 Spro_1079 Serratia proteamaculans 568 geranyltranstransferase YP_001477311.1 1187631 R 399741 CDS YP_001477312.1 157369323 5606830 complement(1188557..1188820) 1 NC_009832.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1188820 5606830 Spro_1080 Serratia proteamaculans 568 exodeoxyribonuclease VII small subunit YP_001477312.1 1188557 R 399741 CDS YP_001477313.1 157369324 5606831 1189053..1190501 1 NC_009832.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1190501 5606831 Spro_1081 Serratia proteamaculans 568 thiamine biosynthesis protein ThiI YP_001477313.1 1189053 D 399741 CDS YP_001477314.1 157369325 5606832 complement(1190536..1191126) 1 NC_009832.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 4-methyl-5b-hydroxyethyl)-thiazole monophosphate biosynthesis protein; DJ-1 family protein 1191126 5606832 Spro_1082 Serratia proteamaculans 568 DJ-1 family protein YP_001477314.1 1190536 R 399741 CDS YP_001477315.1 157369326 5606995 complement(1191089..1192000) 1 NC_009832.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1192000 5606995 Spro_1083 Serratia proteamaculans 568 2-dehydropantoate 2-reductase YP_001477315.1 1191089 R 399741 CDS YP_001477316.1 157369327 5606996 1192183..1192674 1 NC_009832.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 1192674 5606996 Spro_1084 Serratia proteamaculans 568 putative nucleotide-binding protein YP_001477316.1 1192183 D 399741 CDS YP_001477317.1 157369328 5606997 complement(1192878..1194242) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE3146 putative transporter; major facilitator transporter 1194242 5606997 Spro_1085 Serratia proteamaculans 568 major facilitator transporter YP_001477317.1 1192878 R 399741 CDS YP_001477318.1 157369329 5607039 complement(1194443..1195333) 1 NC_009832.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1195333 5607039 Spro_1086 Serratia proteamaculans 568 protoheme IX farnesyltransferase YP_001477318.1 1194443 R 399741 CDS YP_001477319.1 157369330 5607040 complement(1195351..1195689) 1 NC_009832.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: ypi:YpsIP31758_3101 cytochrome o ubiquinol oxidase, subunit IV; cytochrome o ubiquinol oxidase subunit IV 1195689 5607040 Spro_1087 Serratia proteamaculans 568 cytochrome o ubiquinol oxidase subunit IV YP_001477319.1 1195351 R 399741 CDS YP_001477320.1 157369331 5607059 complement(1195686..1196303) 1 NC_009832.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: yen:YE3143 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 1196303 5607059 Spro_1088 Serratia proteamaculans 568 cytochrome o ubiquinol oxidase subunit III YP_001477320.1 1195686 R 399741 CDS YP_001477321.1 157369332 5607060 complement(1196293..1198284) 1 NC_009832.1 KEGG: yen:YE3142 cytochrome o ubiquinol oxidase subunit I; TIGRFAM: Cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 1198284 5607060 Spro_1089 Serratia proteamaculans 568 cytochrome o ubiquinol oxidase subunit I YP_001477321.1 1196293 R 399741 CDS YP_001477322.1 157369333 5607061 complement(1198288..1199238) 1 NC_009832.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: yen:YE3141 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 1199238 5607061 Spro_1090 Serratia proteamaculans 568 cytochrome o ubiquinol oxidase subunit II YP_001477322.1 1198288 R 399741 CDS YP_001477323.1 157369334 5607138 complement(1199679..1201157) 1 NC_009832.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 1201157 ampG 5607138 ampG Serratia proteamaculans 568 muropeptide transporter YP_001477323.1 1199679 R 399741 CDS YP_001477324.1 157369335 5607139 complement(1201211..1201789) 1 NC_009832.1 PFAM: Uncharacterized lipoprotein; KEGG: ypi:YpsIP31758_3095 putative lipoprotein; hypothetical protein 1201789 5607139 Spro_1092 Serratia proteamaculans 568 hypothetical protein YP_001477324.1 1201211 R 399741 CDS YP_001477325.1 157369336 5607140 1202151..1202465 1 NC_009832.1 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA 1202465 5607140 Spro_1093 Serratia proteamaculans 568 transcriptional regulator BolA YP_001477325.1 1202151 D 399741 CDS YP_001477326.1 157369337 5607144 1202832..1204136 1 NC_009832.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1204136 tig 5607144 tig Serratia proteamaculans 568 trigger factor YP_001477326.1 1202832 D 399741 CDS YP_001477327.1 157369338 5607145 1204575..1205198 1 NC_009832.1 KEGG: yen:YE3134 ATP-dependent Clp protease proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 1205198 5607145 Spro_1095 Serratia proteamaculans 568 ATP-dependent Clp protease, proteolytic subunit ClpP YP_001477327.1 1204575 D 399741 CDS YP_001477328.1 157369339 5607146 1205361..1206632 1 NC_009832.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1206632 clpX 5607146 clpX Serratia proteamaculans 568 ATP-dependent protease ATP-binding subunit ClpX YP_001477328.1 1205361 D 399741 CDS YP_001477329.1 157369340 5604442 1206828..1209182 1 NC_009832.1 KEGG: yen:YE3132 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; DNA-binding ATP-dependent protease La 1209182 5604442 Spro_1097 Serratia proteamaculans 568 DNA-binding ATP-dependent protease La YP_001477329.1 1206828 D 399741 CDS YP_001477330.1 157369341 5604443 1209366..1209671 1 NC_009832.1 PFAM: histone family protein DNA-binding protein; KEGG: sdy:SDY_0292 DNA-binding protein HU-beta; histone family protein DNA-binding protein 1209671 5604443 Spro_1098 Serratia proteamaculans 568 histone family protein DNA-binding protein YP_001477330.1 1209366 D 399741 CDS YP_001477331.1 157369342 5604444 1209854..1211737 1 NC_009832.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: yen:YE3130 peptidyl-prolyl cis-trans isomerase D; peptidyl-prolyl cis-trans isomerase D 1211737 5604444 Spro_1099 Serratia proteamaculans 568 peptidyl-prolyl cis-trans isomerase D YP_001477331.1 1209854 D 399741 CDS YP_001477332.1 157369343 5604735 1211877..1212266 1 NC_009832.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein; helix-hairpin-helix repeat-containing competence protein ComEA 1212266 5604735 Spro_1100 Serratia proteamaculans 568 helix-hairpin-helix repeat-containing competence protein ComEA YP_001477332.1 1211877 D 399741 CDS YP_001477333.1 157369344 5604736 1212422..1212835 1 NC_009832.1 PFAM: thioesterase superfamily protein; KEGG: ent:Ent638_0910 thioesterase superfamily protein; thioesterase superfamily protein 1212835 5604736 Spro_1101 Serratia proteamaculans 568 thioesterase superfamily protein YP_001477333.1 1212422 D 399741 CDS YP_001477334.1 157369345 5604737 complement(1212871..1213569) 1 NC_009832.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC 1213569 5604737 Spro_1102 Serratia proteamaculans 568 queuosine biosynthesis protein QueC YP_001477334.1 1212871 R 399741 CDS YP_001477335.1 157369346 5605473 complement(1213688..1215415) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE3126 hypothetical protein; extracellular solute-binding protein 1215415 5605473 Spro_1103 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477335.1 1213688 R 399741 CDS YP_001477336.1 157369347 5605474 1215520..1216344 1 NC_009832.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: yen:YE3125 putative haloacid dehalogenase-like hydrolase; Cof-like hydrolase 1216344 5605474 Spro_1104 Serratia proteamaculans 568 Cof-like hydrolase YP_001477336.1 1215520 D 399741 CDS YP_001477337.1 157369348 5607228 complement(1216406..1217449) 1 NC_009832.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE3124 putative pyridoxal-phosphate dependent protein; pyridoxal-5'-phosphate-dependent protein subunit beta 1217449 5607228 Spro_1105 Serratia proteamaculans 568 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001477337.1 1216406 R 399741 CDS YP_001477338.1 157369349 5607229 1217569..1218030 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: yen:YE3123 probable AsnC-family regulatory protein; AsnC family transcriptional regulator 1218030 5607229 Spro_1106 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001477338.1 1217569 D 399741 CDS YP_001477339.1 157369350 5607230 1218122..1219897 1 NC_009832.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3122 probable ABC transporter (ATP-binding protein); putative multidrug transporter membrane\ATP-binding components 1219897 5607230 Spro_1107 Serratia proteamaculans 568 putative multidrug transporter membrane\ATP-binding components YP_001477339.1 1218122 D 399741 CDS YP_001477340.1 157369351 5607252 1219890..1221668 1 NC_009832.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3121 probable ATP transporter (ATP-binding protein); putative multidrug transporter membrane\ATP-binding components 1221668 5607252 Spro_1108 Serratia proteamaculans 568 putative multidrug transporter membrane\ATP-binding components YP_001477340.1 1219890 D 399741 CDS YP_001477341.1 157369352 5607253 1221963..1222301 1 NC_009832.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 1222301 5607253 Spro_1109 Serratia proteamaculans 568 nitrogen regulatory protein P-II 2 YP_001477341.1 1221963 D 399741 CDS YP_001477342.1 157369353 5607254 1222338..1223624 1 NC_009832.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: yen:YE3119 probable ammonium transporter; ammonium transporter 1223624 5607254 Spro_1110 Serratia proteamaculans 568 ammonium transporter YP_001477342.1 1222338 D 399741 CDS YP_001477343.1 157369354 5607301 complement(1223721..1224584) 1 NC_009832.1 KEGG: yps:YPTB0975 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 1224584 5607301 Spro_1111 Serratia proteamaculans 568 acyl-CoA thioesterase II YP_001477343.1 1223721 R 399741 CDS YP_001477344.1 157369355 5607302 1224815..1225306 1 NC_009832.1 KEGG: yen:YE3117 putative lipoprotein; putative lipoprotein 1225306 5607302 Spro_1112 Serratia proteamaculans 568 putative lipoprotein YP_001477344.1 1224815 D 399741 CDS YP_001477345.1 157369356 5607303 complement(1225372..1225686) 1 NC_009832.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: yen:YE3116 putative 6-O-methylguanine DNA methyltransferase family protein; methylated-DNA--protein-cysteine methyltransferase 1225686 5607303 Spro_1113 Serratia proteamaculans 568 methylated-DNA--protein-cysteine methyltransferase YP_001477345.1 1225372 R 399741 CDS YP_001477346.1 157369357 5605919 complement(1226170..1228146) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: stt:t1012 putative hydrolase; beta-lactamase domain-containing protein 1228146 5605919 Spro_1114 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001477346.1 1226170 R 399741 CDS YP_001477347.1 157369358 5606323 complement(1228571..1229914) 1 NC_009832.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: kpn:KPN_02555 putative xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 1229914 5606323 Spro_1115 Serratia proteamaculans 568 xanthine/uracil/vitamin C permease YP_001477347.1 1228571 R 399741 CDS YP_001477348.1 157369359 5606324 complement(1229997..1231784) 1 NC_009832.1 PFAM: amidohydrolase; KEGG: kpn:KPN_02554 putative amidohydrolase; adenine deaminase 1231784 5606324 Spro_1116 Serratia proteamaculans 568 adenine deaminase YP_001477348.1 1229997 R 399741 CDS YP_001477349.1 157369360 5605044 1231922..1232854 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02553 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 1232854 5605044 Spro_1117 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477349.1 1231922 D 399741 CDS YP_001477350.1 157369361 5605045 complement(1232932..1233135) 1 NC_009832.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 1233135 5605045 Spro_1118 Serratia proteamaculans 568 hemolysin expression-modulating protein YP_001477350.1 1232932 R 399741 CDS YP_001477351.1 157369362 5605046 complement(1233191..1233559) 1 NC_009832.1 KEGG: yen:YE3114 hypothetical protein; hypothetical protein 1233559 5605046 Spro_1119 Serratia proteamaculans 568 hypothetical protein YP_001477351.1 1233191 R 399741 CDS YP_001477352.1 157369363 5605795 complement(1233722..1234075) 1 NC_009832.1 KEGG: yps:YPTB0980 hypothetical protein; hypothetical protein 1234075 5605795 Spro_1120 Serratia proteamaculans 568 hypothetical protein YP_001477352.1 1233722 R 399741 CDS YP_001477353.1 157369364 5605796 1234525..1235238 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3111 ABC transport system ATP-binding protein; ABC transporter-like protein 1235238 5605796 Spro_1121 Serratia proteamaculans 568 ABC transporter-like protein YP_001477353.1 1234525 D 399741 CDS YP_001477354.1 157369365 5605869 1235235..1236092 1 NC_009832.1 PFAM: ABC-3 protein; KEGG: yen:YE3110 putative ABC-transporter membrane protein; ABC-3 protein 1236092 5605869 Spro_1122 Serratia proteamaculans 568 ABC-3 protein YP_001477354.1 1235235 D 399741 CDS YP_001477355.1 157369366 5605870 1236118..1236996 1 NC_009832.1 PFAM: periplasmic solute binding protein; KEGG: yen:YE3109 periplasmic solute binding protein; periplasmic solute binding protein 1236996 5605870 Spro_1123 Serratia proteamaculans 568 periplasmic solute binding protein YP_001477355.1 1236118 D 399741 CDS YP_001477356.1 157369367 5605871 complement(1237110..1237250) 1 NC_009832.1 PFAM: ribosomal protein L36; KEGG: stm:STM0470 putative 50S ribosomal protein L36 (second copy); 50S ribosomal protein L36 1237250 5605871 Spro_1124 Serratia proteamaculans 568 50S ribosomal protein L36 YP_001477356.1 1237110 R 399741 CDS YP_001477357.1 157369368 5602470 complement(1237263..1237520) 1 NC_009832.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 1237520 rpmE2 5602470 rpmE2 Serratia proteamaculans 568 50S ribosomal protein L31 type B YP_001477357.1 1237263 R 399741 CDS YP_001477358.1 157369369 5602471 complement(1237701..1240847) 1 NC_009832.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE3101 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1240847 5602471 Spro_1126 Serratia proteamaculans 568 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001477358.1 1237701 R 399741 CDS YP_001477359.1 157369370 5602472 complement(1240865..1242052) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3100 multidrug efflux protein; RND family efflux transporter MFP subunit 1242052 5602472 Spro_1127 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001477359.1 1240865 R 399741 CDS YP_001477360.1 157369371 5607369 1242195..1242878 1 NC_009832.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 1242878 5607369 Spro_1128 Serratia proteamaculans 568 DNA-binding transcriptional repressor AcrR YP_001477360.1 1242195 D 399741 CDS YP_001477361.1 157369372 5607370 1242889..1243242 1 NC_009832.1 PFAM: DsrE family protein; KEGG: ypi:YpsIP31758_3065 DsrE family protein; DsrE family protein 1243242 5607370 Spro_1129 Serratia proteamaculans 568 DsrE family protein YP_001477361.1 1242889 D 399741 CDS YP_001477362.1 157369373 5607371 1243346..1246738 1 NC_009832.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1246738 5607371 Spro_1130 Serratia proteamaculans 568 potassium efflux protein KefA YP_001477362.1 1243346 D 399741 CDS YP_001477363.1 157369374 5607380 complement(1246782..1246961) 1 NC_009832.1 KEGG: yen:YE3096 hypothetical protein; hypothetical protein 1246961 5607380 Spro_1131 Serratia proteamaculans 568 hypothetical protein YP_001477363.1 1246782 R 399741 CDS YP_001477364.1 157369375 5607381 complement(1247068..1247604) 1 NC_009832.1 PFAM: Primosomal replication priB and priC; KEGG: ypi:YpsIP31758_3062 primosomal replication protein N''; primosomal replication priB and priC 1247604 5607381 Spro_1132 Serratia proteamaculans 568 primosomal replication priB and priC YP_001477364.1 1247068 R 399741 CDS YP_001477365.1 157369376 5607382 1247755..1248135 1 NC_009832.1 PFAM: protein of unknown function DUF454; KEGG: yps:YPTB0990 hypothetical protein; hypothetical protein 1248135 5607382 Spro_1133 Serratia proteamaculans 568 hypothetical protein YP_001477365.1 1247755 D 399741 CDS YP_001477366.1 157369377 5607386 1248204..1248800 1 NC_009832.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1248800 5607386 Spro_1134 Serratia proteamaculans 568 adenine phosphoribosyltransferase YP_001477366.1 1248204 D 399741 CDS YP_001477367.1 157369378 5607387 1248884..1250836 1 NC_009832.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1250836 5607387 Spro_1135 Serratia proteamaculans 568 DNA polymerase III subunits gamma and tau YP_001477367.1 1248884 D 399741 CDS YP_001477368.1 157369379 5607388 1250878..1251207 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_3058 conserved hypothetical protein TIGR00103; hypothetical protein 1251207 5607388 Spro_1136 Serratia proteamaculans 568 hypothetical protein YP_001477368.1 1250878 D 399741 CDS YP_001477369.1 157369380 5607413 1251207..1251812 1 NC_009832.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1251812 recR 5607413 recR Serratia proteamaculans 568 recombination protein RecR YP_001477369.1 1251207 D 399741 CDS YP_001477370.1 157369381 5607414 1251942..1253813 1 NC_009832.1 molecular chaperone; heat shock protein 90 1253813 5607414 Spro_1138 Serratia proteamaculans 568 heat shock protein 90 YP_001477370.1 1251942 D 399741 CDS YP_001477371.1 157369382 5606755 1254018..1254662 1 NC_009832.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1254662 adk 5606755 adk Serratia proteamaculans 568 adenylate kinase YP_001477371.1 1254018 D 399741 CDS YP_001477372.1 157369383 5606756 1254831..1255964 1 NC_009832.1 PFAM: sugar diacid recognition domain protein; KEGG: sec:SC2489 putative regulatory protein; transcriptional regulator CdaR 1255964 5606756 Spro_1140 Serratia proteamaculans 568 transcriptional regulator CdaR YP_001477372.1 1254831 D 399741 CDS YP_001477373.1 157369384 5606757 1256083..1257348 1 NC_009832.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: sec:SC2488 putative permease; gluconate transporter 1257348 5606757 Spro_1141 Serratia proteamaculans 568 gluconate transporter YP_001477373.1 1256083 D 399741 CDS YP_001477374.1 157369385 5605800 1257358..1258506 1 NC_009832.1 PFAM: glycerate kinase; KEGG: ypi:YpsIP31758_4052 glycerate kinase; glycerate kinase 1258506 5605800 Spro_1142 Serratia proteamaculans 568 glycerate kinase YP_001477374.1 1257358 D 399741 CDS YP_001477375.1 157369386 5605801 1258641..1259603 1 NC_009832.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1259603 hemH 5605801 hemH Serratia proteamaculans 568 ferrochelatase YP_001477375.1 1258641 D 399741 CDS YP_001477376.1 157369387 5605802 1259695..1260999 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: yen:YE3069 inosine-guanosine kinase; inosine kinase 1260999 5605802 Spro_1144 Serratia proteamaculans 568 inosine kinase YP_001477376.1 1259695 D 399741 CDS YP_001477377.1 157369388 5607433 complement(1261048..1262739) 1 NC_009832.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; putative cation:proton antiport protein 1262739 5607433 Spro_1145 Serratia proteamaculans 568 putative cation:proton antiport protein YP_001477377.1 1261048 R 399741 CDS YP_001477378.1 157369389 5607434 complement(1262985..1264205) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypn:YPN_0996 membrane efflux protein; major facilitator transporter 1264205 5607434 Spro_1146 Serratia proteamaculans 568 major facilitator transporter YP_001477378.1 1262985 R 399741 CDS YP_001477379.1 157369390 5607435 1264387..1266042 1 NC_009832.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 1266042 ushA 5607435 ushA Serratia proteamaculans 568 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_001477379.1 1264387 D 399741 CDS YP_001477380.1 157369391 5604421 complement(1266081..1266560) 1 NC_009832.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: yen:YE3063 hypothetical protein; hypothetical protein 1266560 5604421 Spro_1148 Serratia proteamaculans 568 hypothetical protein YP_001477380.1 1266081 R 399741 CDS YP_001477381.1 157369392 5604422 complement(1266786..1267589) 1 NC_009832.1 PFAM: GumN family protein; KEGG: eca:ECA1192 hypothetical protein; GumN family protein 1267589 5604422 Spro_1149 Serratia proteamaculans 568 GumN family protein YP_001477381.1 1266786 R 399741 CDS YP_001477382.1 157369393 5604423 complement(1267769..1267969) 1 NC_009832.1 PFAM: Heavy metal transport/detoxification protein; KEGG: yen:YE3061 putative cation-transporting ATPase; heavy metal transport/detoxification protein 1267969 5604423 Spro_1150 Serratia proteamaculans 568 heavy metal transport/detoxification protein YP_001477382.1 1267769 R 399741 CDS YP_001477383.1 157369394 5602683 1268075..1268476 1 NC_009832.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: yen:YE3060 putative regulatory protein; MerR family transcriptional regulator 1268476 5602683 Spro_1151 Serratia proteamaculans 568 MerR family transcriptional regulator YP_001477383.1 1268075 D 399741 CDS YP_001477384.1 157369395 5602684 complement(1268473..1268934) 1 NC_009832.1 PFAM: protein of unknown function DUF107; KEGG: yen:YE3059 hypothetical protein; hypothetical protein 1268934 5602684 Spro_1152 Serratia proteamaculans 568 hypothetical protein YP_001477384.1 1268473 R 399741 CDS YP_001477385.1 157369396 5602685 complement(1268937..1269842) 1 NC_009832.1 PFAM: band 7 protein; KEGG: yen:YE3058 hypothetical protein; hypothetical protein 1269842 5602685 Spro_1153 Serratia proteamaculans 568 hypothetical protein YP_001477385.1 1268937 R 399741 CDS YP_001477386.1 157369397 5603462 1270207..1271358 1 NC_009832.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase 1271358 5603462 Spro_1154 Serratia proteamaculans 568 cyclopropane fatty acyl phospholipid synthase YP_001477386.1 1270207 D 399741 CDS YP_001477387.1 157369398 5603463 complement(1271394..1272278) 1 NC_009832.1 PFAM: Thioredoxin domain; KEGG: yen:YE3057 putative thioredoxin; thioredoxin domain-containing protein 1272278 5603463 Spro_1155 Serratia proteamaculans 568 thioredoxin domain-containing protein YP_001477387.1 1271394 R 399741 CDS YP_001477388.1 157369399 5603688 complement(1272329..1273105) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: yen:YE3056 probable short-chain dehydrogenase; short chain dehydrogenase 1273105 5603688 Spro_1156 Serratia proteamaculans 568 short chain dehydrogenase YP_001477388.1 1272329 R 399741 CDS YP_001477389.1 157369400 5603689 complement(1273131..1273721) 1 NC_009832.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ypi:YpsIP31758_3021 GDSL-like lipase/acylhydrolase family protein; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 1273721 5603689 Spro_1157 Serratia proteamaculans 568 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 YP_001477389.1 1273131 R 399741 CDS YP_001477390.1 157369401 5603690 1273740..1274426 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_2717 ABC transporter ATP-binding protein; putative ABC transporter ATP-binding protein YbbA 1274426 5603690 Spro_1158 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YbbA YP_001477390.1 1273740 D 399741 CDS YP_001477391.1 157369402 5604640 1274423..1276855 1 NC_009832.1 PFAM: protein of unknown function DUF214; KEGG: yen:YE3053 putative permease; hypothetical protein 1276855 5604640 Spro_1159 Serratia proteamaculans 568 hypothetical protein YP_001477391.1 1274423 D 399741 CDS YP_001477392.1 157369403 5604641 1277252..1278658 1 NC_009832.1 KEGG: ent:Ent638_3347 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 1278658 5604641 Spro_1160 Serratia proteamaculans 568 sugar transporter YP_001477392.1 1277252 D 399741 CDS YP_001477393.1 157369404 5604642 1278730..1279746 1 NC_009832.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1279746 5604642 Spro_1161 Serratia proteamaculans 568 UDP-glucose 4-epimerase YP_001477393.1 1278730 D 399741 CDS YP_001477394.1 157369405 5602555 complement(1279874..1280941) 1 NC_009832.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1280941 5602555 Spro_1162 Serratia proteamaculans 568 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001477394.1 1279874 R 399741 CDS YP_001477395.1 157369406 5602556 complement(1280938..1281462) 1 NC_009832.1 KEGG: ypi:YpsIP31758_3017 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit 1281462 5602556 Spro_1163 Serratia proteamaculans 568 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_001477395.1 1280938 R 399741 CDS YP_001477396.1 157369407 5602557 complement(1281628..1282350) 1 NC_009832.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1282350 5602557 Spro_1164 Serratia proteamaculans 568 UDP-2,3-diacylglucosamine hydrolase YP_001477396.1 1281628 R 399741 CDS YP_001477397.1 157369408 5602722 complement(1282361..1282855) 1 NC_009832.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ent:Ent638_0979 peptidylprolyl isomerase; peptidyl-prolyl cis-trans isomerase B 1282855 5602722 Spro_1165 Serratia proteamaculans 568 peptidyl-prolyl cis-trans isomerase B YP_001477397.1 1282361 R 399741 CDS YP_001477398.1 157369409 5602723 1283158..1284543 1 NC_009832.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1284543 cysS 5602723 cysS Serratia proteamaculans 568 cysteinyl-tRNA synthetase YP_001477398.1 1283158 D 399741 CDS YP_001477399.1 157369410 5602724 complement(1284613..1284825) 1 NC_009832.1 KEGG: yen:YE3046 hypothetical protein; hypothetical protein 1284825 5602724 Spro_1167 Serratia proteamaculans 568 hypothetical protein YP_001477399.1 1284613 R 399741 CDS YP_001477400.1 157369411 5602725 complement(1284836..1285702) 1 NC_009832.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1285702 5602725 Spro_1168 Serratia proteamaculans 568 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001477400.1 1284836 R 399741 CDS YP_001477401.1 157369412 5602726 1286139..1286435 1 NC_009832.1 hypothetical protein 1286435 5602726 Spro_1169 Serratia proteamaculans 568 hypothetical protein YP_001477401.1 1286139 D 399741 CDS YP_001477402.1 157369413 5605592 1287524..1288618 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ret:RHE_PD00126 probable aryl-alcohol dehydrogenase protein; alcohol dehydrogenase 1288618 5605592 Spro_1170 Serratia proteamaculans 568 alcohol dehydrogenase YP_001477402.1 1287524 D 399741 CDS YP_001477403.1 157369414 5602751 1288652..1289152 1 NC_009832.1 KEGG: nfa:nfa43510 hypothetical protein; hypothetical protein 1289152 5602751 Spro_1171 Serratia proteamaculans 568 hypothetical protein YP_001477403.1 1288652 D 399741 CDS YP_001477404.1 157369415 5602752 1289330..1290409 1 NC_009832.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pfo:Pfl_2479 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 1290409 5602752 Spro_1172 Serratia proteamaculans 568 NADH:flavin oxidoreductase/NADH oxidase YP_001477404.1 1289330 D 399741 CDS YP_001477405.1 157369416 5602773 1290935..1291918 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bur:Bcep18194_B1199 zinc-containing alcohol dehydrogenase superfamily; alcohol dehydrogenase 1291918 5602773 Spro_1173 Serratia proteamaculans 568 alcohol dehydrogenase YP_001477405.1 1290935 D 399741 CDS YP_001477406.1 157369417 5602774 1291987..1292706 1 NC_009832.1 PFAM: DSBA oxidoreductase; KEGG: bur:Bcep18194_B1200 DsbA oxidoreductase; DSBA oxidoreductase 1292706 5602774 Spro_1174 Serratia proteamaculans 568 DSBA oxidoreductase YP_001477406.1 1291987 D 399741 CDS YP_001477407.1 157369418 5602775 1292709..1293200 1 NC_009832.1 KEGG: bur:Bcep18194_B1201 hypothetical protein; hypothetical protein 1293200 5602775 Spro_1175 Serratia proteamaculans 568 hypothetical protein YP_001477407.1 1292709 D 399741 CDS YP_001477408.1 157369419 5602818 complement(1293321..1294358) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B1198 transcriptional regulator, AraC family; AraC family transcriptional regulator 1294358 5602818 Spro_1176 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001477408.1 1293321 R 399741 CDS YP_001477409.1 157369420 5602819 1294641..1294937 1 NC_009832.1 KEGG: ent:Ent638_3518 beta-lactamase domain protein; beta-lactamase domain-containing protein 1294937 5602819 Spro_1177 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001477409.1 1294641 D 399741 CDS YP_001477410.1 157369421 5602820 complement(1295472..1296533) 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: msm:MSMEG_1304 rhizopine catabolism protein; aldo/keto reductase 1296533 5602820 Spro_1178 Serratia proteamaculans 568 aldo/keto reductase YP_001477410.1 1295472 R 399741 CDS YP_001477411.1 157369422 5602827 1296631..1297542 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll1582 probable transcriptional regulator; LysR family transcriptional regulator 1297542 5602827 Spro_1179 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477411.1 1296631 D 399741 CDS YP_001477412.1 157369423 5602828 1297673..1298224 1 NC_009832.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: eca:ECA3603 putative flavodoxin; flavodoxin/nitric oxide synthase 1298224 5602828 Spro_1180 Serratia proteamaculans 568 flavodoxin/nitric oxide synthase YP_001477412.1 1297673 D 399741 CDS YP_001477413.1 157369424 5602829 1298717..1300165 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1300165 5602829 Spro_1181 Serratia proteamaculans 568 diguanylate cyclase YP_001477413.1 1298717 D 399741 CDS YP_001477414.1 157369425 5602833 complement(1300601..1301092) 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; KEGG: yps:YPTB1087 hypothetical protein; cold-shock DNA-binding domain-containing protein 1301092 5602833 Spro_1182 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001477414.1 1300601 R 399741 CDS YP_001477415.1 157369426 5602834 1301247..1301756 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cvi:CV_3594 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1301756 5602834 Spro_1183 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001477415.1 1301247 D 399741 CDS YP_001477416.1 157369427 5602835 complement(1301787..1302614) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2153 ABC transporter, ATP-binding protein; ABC transporter-like protein 1302614 5602835 Spro_1184 Serratia proteamaculans 568 ABC transporter-like protein YP_001477416.1 1301787 R 399741 CDS YP_001477417.1 157369428 5602842 complement(1302624..1303511) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2154 putative ABC transporter, permease; polar amino acid ABC transporter inner membrane subunit 1303511 5602842 Spro_1185 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477417.1 1302624 R 399741 CDS YP_001477418.1 157369429 5602843 complement(1303560..1304087) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA2155 putative acetyltransferase; GCN5-like N-acetyltransferase 1304087 5602843 Spro_1186 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477418.1 1303560 R 399741 CDS YP_001477419.1 157369430 5602844 complement(1304180..1305505) 1 NC_009832.1 KEGG: ent:Ent638_2090 hypothetical protein; hypothetical protein 1305505 5602844 Spro_1187 Serratia proteamaculans 568 hypothetical protein YP_001477419.1 1304180 R 399741 CDS YP_001477420.1 157369431 5602876 complement(1305690..1306853) 1 NC_009832.1 KEGG: eca:ECA2160 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1306853 5602876 Spro_1188 Serratia proteamaculans 568 amidohydrolase YP_001477420.1 1305690 R 399741 CDS YP_001477421.1 157369432 5602877 1307200..1307409 1 NC_009832.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 1307409 cspE 5602877 cspE Serratia proteamaculans 568 cold shock protein CspE YP_001477421.1 1307200 D 399741 CDS YP_001477422.1 157369433 5602878 complement(1307476..1308666) 1 NC_009832.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi04103 putative bicyclomycin resistance protein; Bcr/CflA subfamily drug resistance transporter 1308666 5602878 Spro_1190 Serratia proteamaculans 568 Bcr/CflA subfamily drug resistance transporter YP_001477422.1 1307476 R 399741 CDS YP_001477423.1 157369434 5602879 complement(1308672..1309268) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: ecs:ECs1862 putative transcription regulatory protein; TetR family transcriptional regulator 1309268 5602879 Spro_1191 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001477423.1 1308672 R 399741 CDS YP_001477424.1 157369435 5602880 complement(1309570..1309953) 1 NC_009832.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: ypi:YpsIP31758_2957 CrcB protein; CrcB protein 1309953 5602880 Spro_1192 Serratia proteamaculans 568 CrcB protein YP_001477424.1 1309570 R 399741 CDS YP_001477425.1 157369436 5602881 complement(1310186..1311247) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: yen:YE3010 putative diguanylate cyclase/phosphodiesterase domain 1 protein; diguanylate cyclase 1311247 5602881 Spro_1193 Serratia proteamaculans 568 diguanylate cyclase YP_001477425.1 1310186 R 399741 CDS YP_001477426.1 157369437 5602882 1311467..1311676 1 NC_009832.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1311676 tatE 5602882 tatE Serratia proteamaculans 568 twin arginine translocase protein A YP_001477426.1 1311467 D 399741 CDS YP_001477427.1 157369438 5602883 complement(1311772..1312737) 1 NC_009832.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1312737 5602883 Spro_1195 Serratia proteamaculans 568 lipoyl synthase YP_001477427.1 1311772 R 399741 CDS YP_001477428.1 157369439 5602900 complement(1312730..1313398) 1 NC_009832.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1313398 lipB 5602900 lipB Serratia proteamaculans 568 lipoate-protein ligase B YP_001477428.1 1312730 R 399741 CDS YP_001477429.1 157369440 5602901 complement(1313533..1313796) 1 NC_009832.1 PFAM: protein of unknown function DUF493; KEGG: sgl:SG0794 hypothetical protein; hypothetical protein 1313796 5602901 Spro_1197 Serratia proteamaculans 568 hypothetical protein YP_001477429.1 1313533 R 399741 CDS YP_001477430.1 157369441 5602902 complement(1313908..1315194) 1 NC_009832.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase fraction A 1315194 5602902 Spro_1198 Serratia proteamaculans 568 D-alanyl-D-alanine carboxypeptidase fraction A YP_001477430.1 1313908 R 399741 CDS YP_001477431.1 157369442 5602906 complement(1315298..1316383) 1 NC_009832.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: yen:YE3004 rare lipoprotein A precursor; rare lipoprotein A 1316383 5602906 Spro_1199 Serratia proteamaculans 568 rare lipoprotein A YP_001477431.1 1315298 R 399741 CDS YP_001477432.1 157369443 5602907 complement(1316394..1317506) 1 NC_009832.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: yen:YE3003 rod shape-determining protein; cell wall shape-determining protein 1317506 5602907 Spro_1200 Serratia proteamaculans 568 cell wall shape-determining protein YP_001477432.1 1316394 R 399741 CDS YP_001477433.1 157369444 5602908 complement(1317515..1319410) 1 NC_009832.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE3002 penicillin-binding protein 2; penicillin-binding protein 2 1319410 5602908 Spro_1201 Serratia proteamaculans 568 penicillin-binding protein 2 YP_001477433.1 1317515 R 399741 CDS YP_001477434.1 157369445 5602917 complement(1319449..1319919) 1 NC_009832.1 PFAM: protein of unknown function DUF163; KEGG: ypi:YpsIP31758_2948 conserved hypothetical protein TIGR00246; hypothetical protein 1319919 5602917 Spro_1202 Serratia proteamaculans 568 hypothetical protein YP_001477434.1 1319449 R 399741 CDS YP_001477435.1 157369446 5602918 complement(1319923..1320240) 1 NC_009832.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: stm:STM0642 hypothetical protein; hypothetical protein 1320240 5602918 Spro_1203 Serratia proteamaculans 568 hypothetical protein YP_001477435.1 1319923 R 399741 CDS YP_001477436.1 157369447 5602919 complement(1320429..1321091) 1 NC_009832.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1321091 nadD 5602919 nadD Serratia proteamaculans 568 nicotinic acid mononucleotide adenylyltransferase YP_001477436.1 1320429 R 399741 CDS YP_001477437.1 157369448 5602923 complement(1321081..1322115) 1 NC_009832.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1322115 holA 5602923 holA Serratia proteamaculans 568 DNA polymerase III subunit delta YP_001477437.1 1321081 R 399741 CDS YP_001477438.1 157369449 5602924 complement(1322112..1322672) 1 NC_009832.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 1322672 5602924 Spro_1206 Serratia proteamaculans 568 LPS-assembly lipoprotein RlpB YP_001477438.1 1322112 R 399741 CDS YP_001477439.1 157369450 5602925 complement(1322687..1325269) 1 NC_009832.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1325269 leuS 5602925 leuS Serratia proteamaculans 568 leucyl-tRNA synthetase YP_001477439.1 1322687 R 399741 CDS YP_001477440.1 157369451 5603011 1325536..1326018 1 NC_009832.1 PFAM: protein of unknown function DUF1451; KEGG: yen:YE2995 hypothetical protein; hypothetical protein 1326018 5603011 Spro_1208 Serratia proteamaculans 568 hypothetical protein YP_001477440.1 1325536 D 399741 CDS YP_001477441.1 157369452 5603012 complement(1326077..1326775) 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sec:SC1637 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 1326775 5603012 Spro_1209 Serratia proteamaculans 568 NAD(P)H dehydrogenase (quinone) YP_001477441.1 1326077 R 399741 CDS YP_001477442.1 157369453 5603013 complement(1326924..1327856) 1 NC_009832.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 1327856 rihA 5603013 rihA Serratia proteamaculans 568 ribonucleoside hydrolase 1 YP_001477442.1 1326924 R 399741 CDS YP_001477443.1 157369454 5603049 complement(1328095..1328820) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2994 putative glutamate/aspartate transport ATP-binding protein; ABC transporter-like protein 1328820 5603049 Spro_1211 Serratia proteamaculans 568 ABC transporter-like protein YP_001477443.1 1328095 R 399741 CDS YP_001477444.1 157369455 5603050 complement(1328820..1329494) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1312 glutamate/aspartate transport system permease protein; polar amino acid ABC transporter inner membrane subunit 1329494 5603050 Spro_1212 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477444.1 1328820 R 399741 CDS YP_001477445.1 157369456 5603066 complement(1329494..1330234) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2992 putative glutamate/aspartate transport system permease; polar amino acid ABC transporter inner membrane subunit 1330234 5603066 Spro_1213 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001477445.1 1329494 R 399741 CDS YP_001477446.1 157369457 5603067 complement(1330432..1331328) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE2991 putative amino acid-binding protein precursor; glutamate and aspartate transporter subunit 1331328 5603067 Spro_1214 Serratia proteamaculans 568 glutamate and aspartate transporter subunit YP_001477446.1 1330432 R 399741 CDS YP_001477447.1 157369458 5603068 complement(1331711..1333240) 1 NC_009832.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1333240 lnt 5603068 lnt Serratia proteamaculans 568 apolipoprotein N-acyltransferase YP_001477447.1 1331711 R 399741 CDS YP_001477448.1 157369459 5603388 complement(1333248..1334126) 1 NC_009832.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: yen:YE2988 hypothetical protein; transporter-associated protein 1334126 5603388 Spro_1216 Serratia proteamaculans 568 transporter-associated protein YP_001477448.1 1333248 R 399741 CDS YP_001477449.1 157369460 5603389 complement(1334211..1334684) 1 NC_009832.1 PFAM: protein of unknown function UPF0054; KEGG: sec:SC0696 putative metal-dependent hydrolase; hypothetical protein 1334684 5603389 Spro_1217 Serratia proteamaculans 568 hypothetical protein YP_001477449.1 1334211 R 399741 CDS YP_001477450.1 157369461 5603390 complement(1334681..1335736) 1 NC_009832.1 PFAM: PhoH family protein; KEGG: ypi:YpsIP31758_2916 PhoH family protein; PhoH family protein 1335736 5603390 Spro_1218 Serratia proteamaculans 568 PhoH family protein YP_001477450.1 1334681 R 399741 CDS YP_001477451.1 157369462 5603497 complement(1335951..1336286) 1 NC_009832.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: stm:STM4289 putative alkylphosphonate uptake protein in phosphonate metabolism; hypothetical protein 1336286 5603497 Spro_1219 Serratia proteamaculans 568 hypothetical protein YP_001477451.1 1335951 R 399741 CDS YP_001477452.1 157369463 5603498 complement(1336426..1337850) 1 NC_009832.1 KEGG: yen:YE2985 putative tRNA-thiotransferase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase protein MiaB 1337850 5603498 Spro_1220 Serratia proteamaculans 568 tRNA-i(6)A37 thiotransferase protein MiaB YP_001477452.1 1336426 R 399741 CDS YP_001477453.1 157369464 5603499 1337990..1339231 1 NC_009832.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1339231 ubiF 5603499 ubiF Serratia proteamaculans 568 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_001477453.1 1337990 D 399741 CDS YP_001477454.1 157369465 5607117 complement(1340143..1341807) 1 NC_009832.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 1341807 asnB 5607117 asnB Serratia proteamaculans 568 asparagine synthetase B YP_001477454.1 1340143 R 399741 CDS YP_001477455.1 157369466 5603506 complement(1342097..1343551) 1 NC_009832.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; Fibronectin type III domain protein; KEGG: pfl:PFL_2091 chitinase; glycoside hydrolase family protein 1343551 5603506 Spro_1223 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001477455.1 1342097 R 399741 CDS YP_001477456.1 157369467 5603507 complement(1343730..1344482) 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE2982 putative N-acetylglucosamine metabolism protein; UMP phosphatase 1344482 5603507 Spro_1224 Serratia proteamaculans 568 UMP phosphatase YP_001477456.1 1343730 R 399741 CDS YP_001477457.1 157369468 5603586 complement(1344550..1345770) 1 NC_009832.1 PFAM: ROK family protein; KEGG: yen:YE2981 putative N-acetylglucosamine regulatory protein; ROK family protein 1345770 5603586 Spro_1225 Serratia proteamaculans 568 ROK family protein YP_001477457.1 1344550 R 399741 CDS YP_001477458.1 157369469 5603587 complement(1345798..1346937) 1 NC_009832.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 1346937 nagA 5603587 nagA Serratia proteamaculans 568 N-acetylglucosamine-6-phosphate deacetylase YP_001477458.1 1345798 R 399741 CDS YP_001477459.1 157369470 5603588 complement(1346956..1347756) 1 NC_009832.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 1347756 nagB 5603588 nagB Serratia proteamaculans 568 glucosamine-6-phosphate deaminase YP_001477459.1 1346956 R 399741 CDS YP_001477460.1 157369471 5603592 1348091..1350037 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system N-acetyl glucosamine specific transporter subunits IIABC 1350037 5603592 Spro_1228 Serratia proteamaculans 568 PTS system N-acetyl glucosamine specific transporter subunits IIABC YP_001477460.1 1348091 D 399741 CDS YP_001477461.1 157369472 5603593 1350279..1351943 1 NC_009832.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1351943 5603593 Spro_1229 Serratia proteamaculans 568 glutaminyl-tRNA synthetase YP_001477461.1 1350279 D 399741 CDS YP_001477462.1 157369473 5603594 1352524..1353927 1 NC_009832.1 PFAM: outer membrane porin; KEGG: ecv:APECO1_1383 hypothetical protein; outer membrane porin 1353927 5603594 Spro_1230 Serratia proteamaculans 568 outer membrane porin YP_001477462.1 1352524 D 399741 CDS YP_001477463.1 157369474 5603681 1353987..1354313 1 NC_009832.1 KEGG: yen:YE2975 putative lipoprotein; putative lipoprotein 1354313 5603681 Spro_1231 Serratia proteamaculans 568 putative lipoprotein YP_001477463.1 1353987 D 399741 CDS YP_001477464.1 157369475 5603682 1354328..1356985 1 NC_009832.1 PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; glycoside hydrolase family 20 domain protein; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: yen:YE2974 chitobiase precursor; beta-N-acetylhexosaminidase 1356985 5603682 Spro_1232 Serratia proteamaculans 568 beta-N-acetylhexosaminidase YP_001477464.1 1354328 D 399741 CDS YP_001477465.1 157369476 5603729 1357062..1358207 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE0648 sugar efflux transporter; major facilitator transporter 1358207 5603729 Spro_1233 Serratia proteamaculans 568 major facilitator transporter YP_001477465.1 1357062 D 399741 CDS YP_001477466.1 157369477 5603730 1358257..1359309 1 NC_009832.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1359309 5603730 Spro_1234 Serratia proteamaculans 568 UDP-glucose 4-epimerase YP_001477466.1 1358257 D 399741 CDS YP_001477467.1 157369478 5603731 1359299..1361260 1 NC_009832.1 hypothetical protein 1361260 5603731 Spro_1235 Serratia proteamaculans 568 hypothetical protein YP_001477467.1 1359299 D 399741 CDS YP_001477468.1 157369479 5603767 complement(1361468..1361914) 1 NC_009832.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 1361914 fur 5603767 fur Serratia proteamaculans 568 ferric uptake regulator YP_001477468.1 1361468 R 399741 CDS YP_001477469.1 157369480 5603768 complement(1362235..1362774) 1 NC_009832.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: yen:YE2972 flavodoxin 1; flavodoxin 1362774 5603768 Spro_1237 Serratia proteamaculans 568 flavodoxin YP_001477469.1 1362235 R 399741 CDS YP_001477470.1 157369481 5603769 complement(1363003..1363290) 1 NC_009832.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: ypi:YpsIP31758_2899 transcriptional regulator, CopG family; LexA regulated protein 1363290 5603769 Spro_1238 Serratia proteamaculans 568 LexA regulated protein YP_001477470.1 1363003 R 399741 CDS YP_001477471.1 157369482 5603953 complement(1363583..1364356) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: yen:YE2969 hypothetical protein; alpha/beta hydrolase fold domain-containing protein 1364356 5603953 Spro_1239 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001477471.1 1363583 R 399741 CDS YP_001477472.1 157369483 5603954 1364723..1365262 1 NC_009832.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 1365262 5603954 Spro_1240 Serratia proteamaculans 568 replication initiation regulator SeqA YP_001477472.1 1364723 D 399741 CDS YP_001477473.1 157369484 5603955 1365339..1366982 1 NC_009832.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1366982 5603955 Spro_1241 Serratia proteamaculans 568 phosphoglucomutase YP_001477473.1 1365339 D 399741 CDS YP_001477474.1 157369485 5603968 1367168..1367824 1 NC_009832.1 PFAM: transcriptional regulator PadR family protein; KEGG: ypi:YpsIP31758_0905 transcriptional regulator, PadR family; PadR-like family transcriptional regulator 1367824 5603968 Spro_1242 Serratia proteamaculans 568 PadR-like family transcriptional regulator YP_001477474.1 1367168 D 399741 CDS YP_001477475.1 157369486 5603969 1367824..1368123 1 NC_009832.1 KEGG: yen:YE1258 hypothetical protein; hypothetical protein 1368123 5603969 Spro_1243 Serratia proteamaculans 568 hypothetical protein YP_001477475.1 1367824 D 399741 CDS YP_001477476.1 157369487 5603970 complement(1368151..1368840) 1 NC_009832.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 1368840 5603970 Spro_1244 Serratia proteamaculans 568 DNA-binding transcriptional activator KdpE YP_001477476.1 1368151 R 399741 CDS YP_001477477.1 157369488 5604004 complement(1368859..1371552) 1 NC_009832.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 1371552 5604004 Spro_1245 Serratia proteamaculans 568 sensor protein KdpD YP_001477477.1 1368859 R 399741 CDS YP_001477478.1 157369489 5604005 complement(1371632..1372201) 1 NC_009832.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 1372201 5604005 Spro_1246 Serratia proteamaculans 568 potassium-transporting ATPase subunit C YP_001477478.1 1371632 R 399741 CDS YP_001477479.1 157369490 5604006 complement(1372221..1374290) 1 NC_009832.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1374290 5604006 Spro_1247 Serratia proteamaculans 568 potassium-transporting ATPase subunit B YP_001477479.1 1372221 R 399741 CDS YP_001477480.1 157369491 5604266 complement(1374317..1376005) 1 NC_009832.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1376005 5604266 Spro_1248 Serratia proteamaculans 568 potassium-transporting ATPase subunit A YP_001477480.1 1374317 R 399741 CDS YP_001477481.1 157369492 5604267 complement(1376005..1376094) 1 NC_009832.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit F 1376094 kdpF 5604267 kdpF Serratia proteamaculans 568 potassium-transporting ATPase subunit F YP_001477481.1 1376005 R 399741 CDS YP_001477482.1 157369493 5604268 1376539..1376745 1 NC_009832.1 KEGG: eca:ECA1344 hypothetical protein; hypothetical protein 1376745 5604268 Spro_1250 Serratia proteamaculans 568 hypothetical protein YP_001477482.1 1376539 D 399741 CDS YP_001477483.1 157369494 5604281 1376889..1377842 1 NC_009832.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: eca:ECA1348 hypothetical protein; hypothetical protein 1377842 5604281 Spro_1251 Serratia proteamaculans 568 hypothetical protein YP_001477483.1 1376889 D 399741 CDS YP_001477484.1 157369495 5604282 1377858..1379288 1 NC_009832.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 1379288 5604282 Spro_1252 Serratia proteamaculans 568 deoxyribodipyrimidine photolyase YP_001477484.1 1377858 D 399741 CDS YP_001477485.1 157369496 5604309 1379311..1380291 1 NC_009832.1 PFAM: cyclic-AMP phosphodiesterase class-II; KEGG: yen:YE2956 putative 3',5'-cyclic-nucleotide phosphodiesterase; cyclic-AMP phosphodiesterase 1380291 5604309 Spro_1253 Serratia proteamaculans 568 cyclic-AMP phosphodiesterase YP_001477485.1 1379311 D 399741 CDS YP_001477486.1 157369497 5604310 1380309..1381052 1 NC_009832.1 PFAM: protein of unknown function DUF34; KEGG: eca:ECA1350 hypothetical protein; putative hydrolase-oxidase 1381052 5604310 Spro_1254 Serratia proteamaculans 568 putative hydrolase-oxidase YP_001477486.1 1380309 D 399741 CDS YP_001477487.1 157369498 5604311 1381204..1381860 1 NC_009832.1 PFAM: Allophanate hydrolase subunit 1; KEGG: yen:YE2955A hypothetical protein; allophanate hydrolase subunit 1 1381860 5604311 Spro_1255 Serratia proteamaculans 568 allophanate hydrolase subunit 1 YP_001477487.1 1381204 D 399741 CDS YP_001477488.1 157369499 5604472 1381854..1382786 1 NC_009832.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: yps:YPTB2909 hypothetical protein; urea amidolyase-like protein 1382786 5604472 Spro_1256 Serratia proteamaculans 568 urea amidolyase-like protein YP_001477488.1 1381854 D 399741 CDS YP_001477489.1 157369500 5604473 1382776..1383513 1 NC_009832.1 PFAM: LamB/YcsF family protein; KEGG: yen:YE2953 hypothetical protein; LamB/YcsF family protein 1383513 5604473 Spro_1257 Serratia proteamaculans 568 LamB/YcsF family protein YP_001477489.1 1382776 D 399741 CDS YP_001477490.1 157369501 5604474 1383574..1384305 1 NC_009832.1 PFAM: protein of unknown function DUF969; KEGG: ypi:YpsIP31758_1118 hypothetical protein; hypothetical protein 1384305 5604474 Spro_1258 Serratia proteamaculans 568 hypothetical protein YP_001477490.1 1383574 D 399741 CDS YP_001477491.1 157369502 5604540 1384302..1385321 1 NC_009832.1 PFAM: protein of unknown function DUF979; KEGG: ypi:YpsIP31758_1119 hypothetical protein; hypothetical protein 1385321 5604540 Spro_1259 Serratia proteamaculans 568 hypothetical protein YP_001477491.1 1384302 D 399741 CDS YP_001477492.1 157369503 5604541 1385331..1385975 1 NC_009832.1 catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase 1385975 5604541 Spro_1260 Serratia proteamaculans 568 pyrrolidone-carboxylate peptidase YP_001477492.1 1385331 D 399741 CDS YP_001477493.1 157369504 5604542 1386032..1386823 1 NC_009832.1 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII 1386823 5604542 Spro_1261 Serratia proteamaculans 568 endonuclease VIII YP_001477493.1 1386032 D 399741 CDS YP_001477494.1 157369505 5604548 complement(1386931..1388223) 1 NC_009832.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1388223 gltA 5604548 gltA Serratia proteamaculans 568 type II citrate synthase YP_001477494.1 1386931 R 399741 CDS YP_001477495.1 157369506 5604549 1388957..1389346 1 NC_009832.1 TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: yps:YPTB1143 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase cytochrome b556 large membrane subunit 1389346 sdhC 5604549 sdhC Serratia proteamaculans 568 succinate dehydrogenase cytochrome b556 large membrane subunit YP_001477495.1 1388957 D 399741 CDS YP_001477496.1 157369507 5604550 1389340..1389687 1 NC_009832.1 TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; KEGG: yen:YE2947 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase cytochrome b556 small membrane subunit 1389687 sdhD 5604550 sdhD Serratia proteamaculans 568 succinate dehydrogenase cytochrome b556 small membrane subunit YP_001477496.1 1389340 D 399741 CDS YP_001477497.1 157369508 5604581 1389689..1391455 1 NC_009832.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1391455 sdhA 5604581 sdhA Serratia proteamaculans 568 succinate dehydrogenase flavoprotein subunit YP_001477497.1 1389689 D 399741 CDS YP_001477498.1 157369509 5604582 1391472..1392188 1 NC_009832.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1392188 sdhB 5604582 sdhB Serratia proteamaculans 568 succinate dehydrogenase iron-sulfur subunit YP_001477498.1 1391472 D 399741 CDS YP_001477499.1 157369510 5604583 1392465..1395278 1 NC_009832.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1395278 sucA 5604583 sucA Serratia proteamaculans 568 2-oxoglutarate dehydrogenase E1 component YP_001477499.1 1392465 D 399741 CDS YP_001477500.1 157369511 5604628 1395290..1396504 1 NC_009832.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1396504 5604628 Spro_1268 Serratia proteamaculans 568 dihydrolipoamide succinyltransferase YP_001477500.1 1395290 D 399741 CDS YP_001477501.1 157369512 5604629 1396622..1397788 1 NC_009832.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1397788 sucC 5604629 sucC Serratia proteamaculans 568 succinyl-CoA synthetase subunit beta YP_001477501.1 1396622 D 399741 CDS YP_001477502.1 157369513 5604630 1397788..1398660 1 NC_009832.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: ent:Ent638_1229 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 1398660 5604630 Spro_1270 Serratia proteamaculans 568 succinyl-CoA synthetase subunit alpha YP_001477502.1 1397788 D 399741 CDS YP_001477503.1 157369514 5604753 1399442..1401010 1 NC_009832.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: eca:ECA1365 cytochrome D ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 1401010 5604753 Spro_1271 Serratia proteamaculans 568 cytochrome bd ubiquinol oxidase subunit I YP_001477503.1 1399442 D 399741 CDS YP_001477504.1 157369515 5604754 1401025..1402164 1 NC_009832.1 KEGG: yen:YE2938 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1402164 5604754 Spro_1272 Serratia proteamaculans 568 cytochrome d ubiquinol oxidase subunit II YP_001477504.1 1401025 D 399741 CDS YP_001477505.1 157369516 5604755 1402182..1402295 1 NC_009832.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: sdy:SDY_0682 putative outer membrane lipoprotein; cyd operon protein YbgT 1402295 5604755 Spro_1273 Serratia proteamaculans 568 cyd operon protein YbgT YP_001477505.1 1402182 D 399741 CDS YP_001477506.1 157369517 5604756 1402295..1402591 1 NC_009832.1 TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; KEGG: eca:ECA1368 hypothetical protein; hypothetical protein 1402591 5604756 Spro_1274 Serratia proteamaculans 568 hypothetical protein YP_001477506.1 1402295 D 399741 CDS YP_001477507.1 157369518 5604757 1402722..1403126 1 NC_009832.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC 1403126 5604757 Spro_1275 Serratia proteamaculans 568 acyl-CoA thioester hydrolase YbgC YP_001477507.1 1402722 D 399741 CDS YP_001477508.1 157369519 5604761 1403132..1403806 1 NC_009832.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1403806 5604761 Spro_1276 Serratia proteamaculans 568 colicin uptake protein TolQ YP_001477508.1 1403132 D 399741 CDS YP_001477509.1 157369520 5604762 1403819..1404247 1 NC_009832.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1404247 5604762 Spro_1277 Serratia proteamaculans 568 colicin uptake protein TolR YP_001477509.1 1403819 D 399741 CDS YP_001477510.1 157369521 5604763 1404329..1405567 1 NC_009832.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1405567 tolA 5604763 tolA Serratia proteamaculans 568 cell envelope integrity inner membrane protein TolA YP_001477510.1 1404329 D 399741 CDS YP_001477511.1 157369522 5604787 1405700..1406992 1 NC_009832.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1406992 tolB 5604787 tolB Serratia proteamaculans 568 translocation protein TolB YP_001477511.1 1405700 D 399741 CDS YP_001477512.1 157369523 5604788 1407037..1407552 1 NC_009832.1 TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: yen:YE2931 peptidoglycan-associated lipoprotein Pal; peptidoglycan-associated outer membrane lipoprotein 1407552 5604788 Spro_1280 Serratia proteamaculans 568 peptidoglycan-associated outer membrane lipoprotein YP_001477512.1 1407037 D 399741 CDS YP_001477513.1 157369524 5604789 1407562..1408362 1 NC_009832.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 1408362 5604789 Spro_1281 Serratia proteamaculans 568 tol-pal system protein YbgF YP_001477513.1 1407562 D 399741 CDS YP_001477514.1 157369525 5605367 1409507..1410568 1 NC_009832.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1410568 5605367 Spro_1282 Serratia proteamaculans 568 quinolinate synthetase YP_001477514.1 1409507 D 399741 CDS YP_001477515.1 157369526 5604802 1410590..1411315 1 NC_009832.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: yen:YE2927 intergral membrane NMN transport protein PnuC; nicotinamide mononucleotide transporter PnuC 1411315 5604802 Spro_1283 Serratia proteamaculans 568 nicotinamide mononucleotide transporter PnuC YP_001477515.1 1410590 D 399741 CDS YP_001477516.1 157369527 5604803 complement(1411353..1412303) 1 NC_009832.1 involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 1412303 5604803 Spro_1284 Serratia proteamaculans 568 zinc transporter ZitB YP_001477516.1 1411353 R 399741 CDS YP_001477517.1 157369528 5604871 complement(1412303..1415515) 1 NC_009832.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl_1864 Hpt sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 1415515 5604871 Spro_1285 Serratia proteamaculans 568 Hpt sensor hybrid histidine kinase YP_001477517.1 1412303 R 399741 CDS YP_001477518.1 157369529 5604872 complement(1415512..1416153) 1 NC_009832.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pfl:PFL_2955 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator 1416153 5604872 Spro_1286 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001477518.1 1415512 R 399741 CDS YP_001477519.1 157369530 5604873 1416323..1417378 1 NC_009832.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1417378 5604873 Spro_1287 Serratia proteamaculans 568 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001477519.1 1416323 D 399741 CDS YP_001477520.1 157369531 5604955 complement(1417448..1418200) 1 NC_009832.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1418200 gpmA 5604955 gpmA Serratia proteamaculans 568 phosphoglyceromutase YP_001477520.1 1417448 R 399741 CDS YP_001477521.1 157369532 5604956 complement(1418414..1418752) 1 NC_009832.1 PFAM: PsiF repeat protein; KEGG: yen:YE2921 putative starvation-inducible protein; PsiF repeat-containing protein 1418752 5604956 Spro_1289 Serratia proteamaculans 568 PsiF repeat-containing protein YP_001477521.1 1418414 R 399741 CDS YP_001477522.1 157369533 5604957 complement(1418949..1419992) 1 NC_009832.1 KEGG: yps:YPTB1168 aldose 1-epimerase (mutarotase); TIGRFAM: galactose mutarotase; PFAM: Aldose 1-epimerase; galactose mutarotase 1419992 5604957 Spro_1290 Serratia proteamaculans 568 galactose mutarotase YP_001477522.1 1418949 R 399741 CDS YP_001477523.1 157369534 5605000 complement(1419986..1421137) 1 NC_009832.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 1421137 5605000 Spro_1291 Serratia proteamaculans 568 galactokinase YP_001477523.1 1419986 R 399741 CDS YP_001477524.1 157369535 5605001 complement(1421134..1422186) 1 NC_009832.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1422186 5605001 Spro_1292 Serratia proteamaculans 568 galactose-1-phosphate uridylyltransferase YP_001477524.1 1421134 R 399741 CDS YP_001477525.1 157369536 5605070 complement(1422472..1423290) 1 NC_009832.1 PFAM: Abortive infection protein; KEGG: ypi:YpsIP31758_2854 CAAX amino terminal protease family protein; abortive infection protein 1423290 5605070 Spro_1293 Serratia proteamaculans 568 abortive infection protein YP_001477525.1 1422472 R 399741 CDS YP_001477526.1 157369537 5605071 complement(1423444..1424016) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: aha:AHA_3239 isochorismatase family protein; isochorismatase hydrolase 1424016 5605071 Spro_1294 Serratia proteamaculans 568 isochorismatase hydrolase YP_001477526.1 1423444 R 399741 CDS YP_001477527.1 157369538 5605072 complement(1424134..1425606) 1 NC_009832.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; putative molybdenum transport ATP-binding protein ModF 1425606 5605072 Spro_1295 Serratia proteamaculans 568 putative molybdenum transport ATP-binding protein ModF YP_001477527.1 1424134 R 399741 CDS YP_001477528.1 157369539 5605112 complement(1425697..1426488) 1 NC_009832.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 1426488 5605112 Spro_1296 Serratia proteamaculans 568 DNA-binding transcriptional regulator ModE YP_001477528.1 1425697 R 399741 CDS YP_001477529.1 157369540 5605113 1426693..1428858 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_0066 TonB-dependent receptor; TonB-dependent siderophore receptor 1428858 5605113 Spro_1297 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001477529.1 1426693 D 399741 CDS YP_001477530.1 157369541 5605114 1428866..1429867 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: msm:MSMEG_4561 ABC Fe3+-siderophores transporter, periplasmic binding protein; periplasmic binding protein 1429867 5605114 Spro_1298 Serratia proteamaculans 568 periplasmic binding protein YP_001477530.1 1428866 D 399741 CDS YP_001477531.1 157369542 5605115 1429869..1430624 1 NC_009832.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_39660 hypothetical protein; type 12 methyltransferase 1430624 5605115 Spro_1299 Serratia proteamaculans 568 type 12 methyltransferase YP_001477531.1 1429869 D 399741 CDS YP_001477532.1 157369543 5605116 1430626..1431672 1 NC_009832.1 PFAM: transport system permease protein; KEGG: msm:MSMEG_4559 ABC transporter, membrane spanning protein; transport system permease 1431672 5605116 Spro_1300 Serratia proteamaculans 568 transport system permease YP_001477532.1 1430626 D 399741 CDS YP_001477533.1 157369544 5605117 1431669..1432454 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cmi:CMM_0365 putative Fe3+-siderophore ABC transporter, ATPase component; ABC transporter-like protein 1432454 5605117 Spro_1301 Serratia proteamaculans 568 ABC transporter-like protein YP_001477533.1 1431669 D 399741 CDS YP_001477534.1 157369545 5605229 1432623..1432766 1 NC_009832.1 KEGG: ypi:YpsIP31758_2851 hypothetical protein; hypothetical protein 1432766 5605229 Spro_1302 Serratia proteamaculans 568 hypothetical protein YP_001477534.1 1432623 D 399741 CDS YP_001477535.1 157369546 5605230 1433053..1433826 1 NC_009832.1 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1433826 modA 5605230 modA Serratia proteamaculans 568 molybdate transporter periplasmic protein YP_001477535.1 1433053 D 399741 CDS YP_001477536.1 157369547 5605231 1433823..1434512 1 NC_009832.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1434512 modB 5605231 modB Serratia proteamaculans 568 molybdate ABC transporter permease YP_001477536.1 1433823 D 399741 CDS YP_001477537.1 157369548 5605235 1434513..1435580 1 NC_009832.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1435580 modC 5605235 modC Serratia proteamaculans 568 molybdate transporter ATP-binding protein YP_001477537.1 1434513 D 399741 CDS YP_001477538.1 157369549 5605236 complement(1435613..1436437) 1 NC_009832.1 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 1436437 5605236 Spro_1306 Serratia proteamaculans 568 phosphotransferase YP_001477538.1 1435613 R 399741 CDS YP_001477539.1 157369550 5605237 1436605..1437600 1 NC_009832.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1437600 5605237 Spro_1307 Serratia proteamaculans 568 6-phosphogluconolactonase YP_001477539.1 1436605 D 399741 CDS YP_001477540.1 157369551 5605357 complement(1437643..1438125) 1 NC_009832.1 YbhB; similar to rat and human kinase inhibitory proteins; putative kinase inhibitor protein 1438125 5605357 Spro_1308 Serratia proteamaculans 568 putative kinase inhibitor protein YP_001477540.1 1437643 R 399741 CDS YP_001477541.1 157369552 5605358 1438292..1438693 1 NC_009832.1 PFAM: protein of unknown function DUF1232; KEGG: gme:Gmet_2189 protein of unknown function DUF1232; hypothetical protein 1438693 5605358 Spro_1309 Serratia proteamaculans 568 hypothetical protein YP_001477541.1 1438292 D 399741 CDS YP_001477542.1 157369553 5605359 complement(1438698..1439990) 1 NC_009832.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 1439990 5605359 Spro_1310 Serratia proteamaculans 568 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_001477542.1 1438698 R 399741 CDS YP_001477543.1 157369554 5605372 1440062..1441099 1 NC_009832.1 KEGG: eca:ECA2825 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1441099 5605372 Spro_1311 Serratia proteamaculans 568 biotin synthase YP_001477543.1 1440062 D 399741 CDS YP_001477544.1 157369555 5605373 1441099..1442250 1 NC_009832.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1442250 5605373 Spro_1312 Serratia proteamaculans 568 8-amino-7-oxononanoate synthase YP_001477544.1 1441099 D 399741 CDS YP_001477545.1 157369556 5605386 1442234..1443001 1 NC_009832.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ypi:YpsIP31758_2842 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 1443001 5605386 Spro_1313 Serratia proteamaculans 568 biotin biosynthesis protein BioC YP_001477545.1 1442234 D 399741 CDS YP_001477546.1 157369557 5605387 1442994..1443674 1 NC_009832.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1443674 bioD 5605387 bioD Serratia proteamaculans 568 dithiobiotin synthetase YP_001477546.1 1442994 D 399741 CDS YP_001477547.1 157369558 5605388 complement(1443732..1445402) 1 NC_009832.1 hypothetical protein 1445402 5605388 Spro_1315 Serratia proteamaculans 568 hypothetical protein YP_001477547.1 1443732 R 399741 CDS YP_001477548.1 157369559 5605515 complement(1445593..1446303) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2903 putative amino acid transporter; ABC transporter-like protein 1446303 5605515 Spro_1316 Serratia proteamaculans 568 ABC transporter-like protein YP_001477548.1 1445593 R 399741 CDS YP_001477549.1 157369560 5605516 1447442..1449454 1 NC_009832.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1449454 5605516 Spro_1317 Serratia proteamaculans 568 excinuclease ABC subunit B YP_001477549.1 1447442 D 399741 CDS YP_001477550.1 157369561 5605517 1449562..1449819 1 NC_009832.1 KEGG: ypi:YpsIP31758_2838 hypothetical protein; hypothetical protein 1449819 5605517 Spro_1318 Serratia proteamaculans 568 hypothetical protein YP_001477550.1 1449562 D 399741 CDS YP_001477551.1 157369562 5605518 complement(1449824..1450741) 1 NC_009832.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: ypi:YpsIP31758_2837 hypothetical protein; hypothetical protein 1450741 5605518 Spro_1319 Serratia proteamaculans 568 hypothetical protein YP_001477551.1 1449824 R 399741 CDS YP_001477552.1 157369563 5605519 1451134..1452117 1 NC_009832.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1452117 moaA 5605519 moaA Serratia proteamaculans 568 molybdenum cofactor biosynthesis protein A YP_001477552.1 1451134 D 399741 CDS YP_001477553.1 157369564 5605520 1452145..1452657 1 NC_009832.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: kpn:KPN_00811 molybdopterin biosynthesis protein B; molybdenum cofactor biosynthesis protein B 1452657 5605520 Spro_1321 Serratia proteamaculans 568 molybdenum cofactor biosynthesis protein B YP_001477553.1 1452145 D 399741 CDS YP_001477554.1 157369565 5605555 1452663..1453142 1 NC_009832.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1453142 moaC 5605555 moaC Serratia proteamaculans 568 molybdenum cofactor biosynthesis protein MoaC YP_001477554.1 1452663 D 399741 CDS YP_001477555.1 157369566 5605556 1453139..1453384 1 NC_009832.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 1453384 moaD 5605556 moaD Serratia proteamaculans 568 molybdopterin synthase small subunit YP_001477555.1 1453139 D 399741 CDS YP_001477556.1 157369567 5605557 1453384..1453854 1 NC_009832.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 1453854 moaE 5605557 moaE Serratia proteamaculans 568 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_001477556.1 1453384 D 399741 CDS YP_001477557.1 157369568 5605589 1454109..1454819 1 NC_009832.1 PFAM: protein of unknown function UPF0005; KEGG: eca:ECA2812 putative membrane protein; hypothetical protein 1454819 5605589 Spro_1325 Serratia proteamaculans 568 hypothetical protein YP_001477557.1 1454109 D 399741 CDS YP_001477558.1 157369569 5605590 complement(1454989..1456095) 1 NC_009832.1 PFAM: ABC-2 type transporter; KEGG: ypi:YpsIP31758_2815 ABC transporter, permease protein; ABC-2 type transporter 1456095 5605590 Spro_1326 Serratia proteamaculans 568 ABC-2 type transporter YP_001477558.1 1454989 R 399741 CDS YP_001477559.1 157369570 5605591 complement(1456106..1457260) 1 NC_009832.1 PFAM: ABC-2 type transporter; KEGG: yen:YE2893 hypothetical protein; ABC-2 type transporter 1457260 5605591 Spro_1327 Serratia proteamaculans 568 ABC-2 type transporter YP_001477559.1 1456106 R 399741 CDS YP_001477560.1 157369571 5605596 complement(1457257..1458987) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_2813 ABC transporter, ATP-binding protein; ABC transporter-like protein 1458987 5605596 Spro_1328 Serratia proteamaculans 568 ABC transporter-like protein YP_001477560.1 1457257 R 399741 CDS YP_001477561.1 157369572 5605597 complement(1458998..1459984) 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: yen:YE2891 HlyD family secretion protein; hypothetical protein 1459984 5605597 Spro_1329 Serratia proteamaculans 568 hypothetical protein YP_001477561.1 1458998 R 399741 CDS YP_001477562.1 157369573 5605598 complement(1460119..1460817) 1 NC_009832.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: ypi:YpsIP31758_2811 transcriptional regulator, TetR family; putative DNA-binding transcriptional regulator 1460817 5605598 Spro_1330 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001477562.1 1460119 R 399741 CDS YP_001477563.1 157369574 5605664 1461123..1462493 1 NC_009832.1 this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 1462493 5605664 Spro_1331 Serratia proteamaculans 568 ATP-dependent RNA helicase RhlE YP_001477563.1 1461123 D 399741 CDS YP_001477564.1 157369575 5605665 complement(1462704..1463732) 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: ppu:PP_1272 multidrug efflux MFS membrane fusion protein, putative; secretion protein HlyD family protein 1463732 5605665 Spro_1332 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001477564.1 1462704 R 399741 CDS YP_001477565.1 157369576 5605685 complement(1463735..1465342) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfo:Pfl_0142 major facilitator superfamily MFS_1; major facilitator transporter 1465342 5605685 Spro_1333 Serratia proteamaculans 568 major facilitator transporter YP_001477565.1 1463735 R 399741 CDS YP_001477566.1 157369577 5605686 1465503..1466282 1 NC_009832.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ftn:FTN_0720 transcriptional regulator, IclR family; IclR family transcriptional regulator 1466282 5605686 Spro_1334 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001477566.1 1465503 D 399741 CDS YP_001477567.1 157369578 5605687 1466295..1466744 1 NC_009832.1 PFAM: UspA domain protein; KEGG: pen:PSEEN4556 universal stress protein family; UspA domain-containing protein 1466744 5605687 Spro_1335 Serratia proteamaculans 568 UspA domain-containing protein YP_001477567.1 1466295 D 399741 CDS YP_001477568.1 157369579 5605721 1466769..1467728 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sco:SCO2696 2-hydroxyacid-family dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1467728 5605721 Spro_1336 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001477568.1 1466769 D 399741 CDS YP_001477569.1 157369580 5605722 1467809..1468738 1 NC_009832.1 PFAM: dihydrouridine synthase DuS; KEGG: ypi:YpsIP31758_2808 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 1468738 5605722 Spro_1337 Serratia proteamaculans 568 tRNA-dihydrouridine synthase C YP_001477569.1 1467809 D 399741 CDS YP_001477570.1 157369581 5605723 complement(1468841..1469602) 1 NC_009832.1 PFAM: N-acetyltransferase; KEGG: mxa:MXAN_1194 N-acetyltransferase family protein; N-acetyltransferase 1469602 5605723 Spro_1338 Serratia proteamaculans 568 N-acetyltransferase YP_001477570.1 1468841 R 399741 CDS YP_001477571.1 157369582 5605736 complement(1469678..1470616) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B0248 transcriptional regulator, LysR family; LysR family transcriptional regulator 1470616 5605736 Spro_1339 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477571.1 1469678 R 399741 CDS YP_001477572.1 157369583 5605737 1470710..1471552 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_0285 hypothetical protein; hypothetical protein 1471552 5605737 Spro_1340 Serratia proteamaculans 568 hypothetical protein YP_001477572.1 1470710 D 399741 CDS YP_001477573.1 157369584 5605738 complement(1471577..1472476) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02452 putative bacterial regulatory protein, LysR; LysR family transcriptional regulator 1472476 5605738 Spro_1341 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477573.1 1471577 R 399741 CDS YP_001477574.1 157369585 5605769 1472609..1473190 1 NC_009832.1 hypothetical protein 1473190 5605769 Spro_1342 Serratia proteamaculans 568 hypothetical protein YP_001477574.1 1472609 D 399741 CDS YP_001477575.1 157369586 5605770 complement(1473187..1474485) 1 NC_009832.1 PFAM: polysaccharide biosynthesis protein; KEGG: afw:Anae109_1236 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1474485 5605770 Spro_1343 Serratia proteamaculans 568 polysaccharide biosynthesis protein YP_001477575.1 1473187 R 399741 CDS YP_001477576.1 157369587 5605771 1474640..1475494 1 NC_009832.1 KEGG: bca:BCE_5388 hypothetical protein; hypothetical protein 1475494 5605771 Spro_1344 Serratia proteamaculans 568 hypothetical protein YP_001477576.1 1474640 D 399741 CDS YP_001477577.1 157369588 5605789 complement(1475510..1476412) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pin:Ping_2316 transcriptional regulator, substrate-binding of LysR family protein; LysR family transcriptional regulator 1476412 5605789 Spro_1345 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477577.1 1475510 R 399741 CDS YP_001477578.1 157369589 5605790 1476506..1477303 1 NC_009832.1 KEGG: yen:YE2064 hypothetical protein; hypothetical protein 1477303 5605790 Spro_1346 Serratia proteamaculans 568 hypothetical protein YP_001477578.1 1476506 D 399741 CDS YP_001477579.1 157369590 5605791 complement(1477531..1478994) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_2147 L-asparagine permease; amino acid permease-associated protein 1478994 5605791 Spro_1347 Serratia proteamaculans 568 amino acid permease-associated protein YP_001477579.1 1477531 R 399741 CDS YP_001477580.1 157369591 5605818 complement(1479483..1479920) 1 NC_009832.1 PFAM: transmembrane pair domain protein; KEGG: pau:PA14_28430 hypothetical protein; transmembrane pair domain-containing protein 1479920 5605818 Spro_1348 Serratia proteamaculans 568 transmembrane pair domain-containing protein YP_001477580.1 1479483 R 399741 CDS YP_001477581.1 157369592 5605819 1480047..1480940 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_2479 probable transcriptional regulator; LysR family transcriptional regulator 1480940 5605819 Spro_1349 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477581.1 1480047 D 399741 CDS YP_001477582.1 157369593 5605820 complement(1480964..1481527) 1 NC_009832.1 PFAM: SNARE associated Golgi protein; KEGG: sdy:SDY_2152 hypothetical protein; hypothetical protein 1481527 5605820 Spro_1350 Serratia proteamaculans 568 hypothetical protein YP_001477582.1 1480964 R 399741 CDS YP_001477583.1 157369594 5605872 1481623..1482726 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: kpn:KPN_02462 putative S-adenosylhomocysteine hydrolase; adenosylhomocysteinase 1482726 5605872 Spro_1351 Serratia proteamaculans 568 adenosylhomocysteinase YP_001477583.1 1481623 D 399741 CDS YP_001477584.1 157369595 5605873 1482888..1483817 1 NC_009832.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 1483817 pbpG 5605873 pbpG Serratia proteamaculans 568 D-alanyl-D-alanine endopeptidase YP_001477584.1 1482888 D 399741 CDS YP_001477585.1 157369596 5605895 1483979..1484389 1 NC_009832.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: oan:Oant_1566 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1484389 5605895 Spro_1353 Serratia proteamaculans 568 3-demethylubiquinone-9 3-methyltransferase YP_001477585.1 1483979 D 399741 CDS YP_001477586.1 157369597 5605896 complement(1484465..1484842) 1 NC_009832.1 hypothetical protein 1484842 5605896 Spro_1354 Serratia proteamaculans 568 hypothetical protein YP_001477586.1 1484465 R 399741 CDS YP_001477587.1 157369598 5605897 1485546..1486466 1 NC_009832.1 PFAM: protein of unknown function DUF808; KEGG: pap:PSPA7_3434 hypothetical protein; hypothetical protein 1486466 5605897 Spro_1355 Serratia proteamaculans 568 hypothetical protein YP_001477587.1 1485546 D 399741 CDS YP_001477588.1 157369599 5605915 complement(1486499..1487044) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_02570 hypothetical acetyltransferase; GCN5-like N-acetyltransferase 1487044 5605915 Spro_1356 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477588.1 1486499 R 399741 CDS YP_001477589.1 157369600 5605916 complement(1487170..1488198) 1 NC_009832.1 PFAM: regulatory protein MerR; Albicidin resistance; Transcription regulator MerR DNA binding; KEGG: kpn:KPN_02240 putative albicidin resistance protein; MerR family transcriptional regulator 1488198 5605916 Spro_1357 Serratia proteamaculans 568 MerR family transcriptional regulator YP_001477589.1 1487170 R 399741 CDS YP_001477590.1 157369601 5605917 complement(1488418..1488870) 1 NC_009832.1 KEGG: ecs:ECs4710 hypothetical protein; hypothetical protein 1488870 5605917 Spro_1358 Serratia proteamaculans 568 hypothetical protein YP_001477590.1 1488418 R 399741 CDS YP_001477591.1 157369602 5605937 complement(1489026..1489838) 1 NC_009832.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: eca:ECA1498 lipoprotein-28 precursor; YaeC family lipoprotein 1489838 5605937 Spro_1359 Serratia proteamaculans 568 YaeC family lipoprotein YP_001477591.1 1489026 R 399741 CDS YP_001477592.1 157369603 5605938 complement(1489970..1490806) 1 NC_009832.1 PFAM: protein of unknown function DUF1460; KEGG: pfl:PFL_0370 lipoprotein, putative; hypothetical protein 1490806 5605938 Spro_1360 Serratia proteamaculans 568 hypothetical protein YP_001477592.1 1489970 R 399741 CDS YP_001477593.1 157369604 5605939 complement(1490911..1491453) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_2189 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 1491453 5605939 Spro_1361 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477593.1 1490911 R 399741 CDS YP_001477594.1 157369605 5605973 complement(1491450..1491920) 1 NC_009832.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: kpn:KPN_04414 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase; hexapaptide repeat-containing transferase 1491920 5605973 Spro_1362 Serratia proteamaculans 568 hexapaptide repeat-containing transferase YP_001477594.1 1491450 R 399741 CDS YP_001477595.1 157369606 5605974 1492125..1492715 1 NC_009832.1 PFAM: protein of unknown function DUF1282; KEGG: yen:YE2135 hypothetical protein; hypothetical protein 1492715 5605974 Spro_1363 Serratia proteamaculans 568 hypothetical protein YP_001477595.1 1492125 D 399741 CDS YP_001477596.1 157369607 5605975 complement(1492785..1494485) 1 NC_009832.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 1494485 5605975 Spro_1364 Serratia proteamaculans 568 D-lactate dehydrogenase YP_001477596.1 1492785 R 399741 CDS YP_001477597.1 157369608 5605979 complement(1494669..1495463) 1 NC_009832.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: kpn:KPN_01674 methionine aminopeptidase; methionine aminopeptidase 1495463 5605979 Spro_1365 Serratia proteamaculans 568 methionine aminopeptidase YP_001477597.1 1494669 R 399741 CDS YP_001477598.1 157369609 5605980 complement(1495460..1495675) 1 NC_009832.1 KEGG: pen:PSEEN1416 hypothetical protein; hypothetical protein 1495675 5605980 Spro_1366 Serratia proteamaculans 568 hypothetical protein YP_001477598.1 1495460 R 399741 CDS YP_001477599.1 157369610 5605981 1495833..1496936 1 NC_009832.1 KEGG: yen:YE3211 D-alanine--D-alanine ligase A; TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1496936 5605981 Spro_1367 Serratia proteamaculans 568 D-alanine--D-alanine ligase YP_001477599.1 1495833 D 399741 CDS YP_001477600.1 157369611 5605985 complement(1497105..1497884) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_0110 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1497884 5605985 Spro_1368 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477600.1 1497105 R 399741 CDS YP_001477601.1 157369612 5605986 complement(1497927..1499081) 1 NC_009832.1 catalyzes the transfer of an amino moiety; putative aminotransferase 1499081 5605986 Spro_1369 Serratia proteamaculans 568 putative aminotransferase YP_001477601.1 1497927 R 399741 CDS YP_001477602.1 157369613 5605987 1499302..1500231 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4813 transcriptional regulator, LysR family; LysR family transcriptional regulator 1500231 5605987 Spro_1370 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477602.1 1499302 D 399741 CDS YP_001477603.1 157369614 5606048 1500348..1502645 1 NC_009832.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: eca:ECA2790 periplasmic beta-glucosidase; glycoside hydrolase family 3 protein 1502645 5606048 Spro_1371 Serratia proteamaculans 568 glycoside hydrolase family 3 protein YP_001477603.1 1500348 D 399741 CDS YP_001477604.1 157369615 5606049 1502814..1503863 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3096 ABC-transporter periplasmic-binding component; periplasmic binding protein 1503863 5606049 Spro_1372 Serratia proteamaculans 568 periplasmic binding protein YP_001477604.1 1502814 D 399741 CDS YP_001477605.1 157369616 5606059 1503860..1504858 1 NC_009832.1 PFAM: transport system permease protein; KEGG: eca:ECA3095 ABC transporter permease protein; transport system permease 1504858 5606059 Spro_1373 Serratia proteamaculans 568 transport system permease YP_001477605.1 1503860 D 399741 CDS YP_001477606.1 157369617 5606060 1504851..1505630 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hin:HI1470 putative iron transport system ATP-binding protein; ABC transporter-like protein 1505630 5606060 Spro_1374 Serratia proteamaculans 568 ABC transporter-like protein YP_001477606.1 1504851 D 399741 CDS YP_001477607.1 157369618 5606061 1505623..1506354 1 NC_009832.1 KEGG: kpn:KPN_02127 molybdate transport protein (ABC superfamily, peri_bind); molybdate ABC transporter periplasmic substrate-binding protein 1506354 5606061 Spro_1375 Serratia proteamaculans 568 molybdate ABC transporter periplasmic substrate-binding protein YP_001477607.1 1505623 D 399741 CDS YP_001477608.1 157369619 5606094 complement(1506386..1506682) 1 NC_009832.1 hypothetical protein 1506682 5606094 Spro_1376 Serratia proteamaculans 568 hypothetical protein YP_001477608.1 1506386 R 399741 CDS YP_001477609.1 157369620 5606095 complement(1506679..1507314) 1 NC_009832.1 KEGG: ent:Ent638_4322 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 1507314 5606095 Spro_1377 Serratia proteamaculans 568 cobyrinic acid a,c-diamide synthase YP_001477609.1 1506679 R 399741 CDS YP_001477610.1 157369621 5606096 complement(1507591..1507932) 1 NC_009832.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: yen:YE2881 hypothetical protein; hypothetical protein 1507932 5606096 Spro_1378 Serratia proteamaculans 568 hypothetical protein YP_001477610.1 1507591 R 399741 CDS YP_001477611.1 157369622 5606183 complement(1507991..1508452) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ngo:NGO1928 putative acetyltransferase; GCN5-like N-acetyltransferase 1508452 5606183 Spro_1379 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477611.1 1507991 R 399741 CDS YP_001477612.1 157369623 5606184 complement(1508505..1509398) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_2438 transcriptional regulator, LysR family; LysR family transcriptional regulator 1509398 5606184 Spro_1380 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477612.1 1508505 R 399741 CDS YP_001477613.1 157369624 5606185 complement(1509459..1510643) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: nfa:nfa29650 putative transporter; major facilitator transporter 1510643 5606185 Spro_1381 Serratia proteamaculans 568 major facilitator transporter YP_001477613.1 1509459 R 399741 CDS YP_001477614.1 157369625 5606195 complement(1510879..1512444) 1 NC_009832.1 PFAM: carbohydrate kinase FGGY; KEGG: ypi:YpsIP31758_3518 carbohydrate kinase, FGGY family; autoinducer-2 (AI-2) kinase 1512444 5606195 Spro_1382 Serratia proteamaculans 568 autoinducer-2 (AI-2) kinase YP_001477614.1 1510879 R 399741 CDS YP_001477615.1 157369626 5606196 1512638..1512931 1 NC_009832.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE0523 hypothetical protein; autoinducer-2 (AI-2) modifying protein LsrG 1512931 5606196 Spro_1383 Serratia proteamaculans 568 autoinducer-2 (AI-2) modifying protein LsrG YP_001477615.1 1512638 D 399741 CDS YP_001477616.1 157369627 5606197 1513019..1513612 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pfo:Pfl_2164 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1513612 5606197 Spro_1384 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001477616.1 1513019 D 399741 CDS YP_001477617.1 157369628 5606204 complement(1513609..1514427) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: psa:PST_2925 transcriptional regulator, AraC family; AraC family transcriptional regulator 1514427 5606204 Spro_1385 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001477617.1 1513609 R 399741 CDS YP_001477618.1 157369629 5606205 complement(1514571..1515419) 1 NC_009832.1 PFAM: protein of unknown function RIO1; KEGG: yen:YE1747 hypothetical protein; hypothetical protein 1515419 5606205 Spro_1386 Serratia proteamaculans 568 hypothetical protein YP_001477618.1 1514571 R 399741 CDS YP_001477619.1 157369630 5606206 complement(1515543..1517033) 1 NC_009832.1 converts 1,4-alpha-D-glucans to maltodextrin; cytoplasmic alpha-amylase 1517033 5606206 Spro_1387 Serratia proteamaculans 568 cytoplasmic alpha-amylase YP_001477619.1 1515543 R 399741 CDS YP_001477620.1 157369631 5606230 complement(1517162..1517821) 1 NC_009832.1 PFAM: protein of unknown function DUF799; KEGG: eca:ECA4458 putative lipoprotein; hypothetical protein 1517821 5606230 Spro_1388 Serratia proteamaculans 568 hypothetical protein YP_001477620.1 1517162 R 399741 CDS YP_001477621.1 157369632 5606231 complement(1517818..1518174) 1 NC_009832.1 KEGG: yen:YE1235 putative lipoprotein; putative lipoprotein 1518174 5606231 Spro_1389 Serratia proteamaculans 568 putative lipoprotein YP_001477621.1 1517818 R 399741 CDS YP_001477622.1 157369633 5606232 complement(1518193..1518864) 1 NC_009832.1 PFAM: Curli production assembly/transport component CsgG; KEGG: eca:ECA4460 putative lipoprotein; curli production assembly/transport component CsgG 1518864 5606232 Spro_1390 Serratia proteamaculans 568 curli production assembly/transport component CsgG YP_001477622.1 1518193 R 399741 CDS YP_001477623.1 157369634 5606233 1519330..1520253 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: shn:Shewana3_3368 transcriptional regulator, MarR family with acetyltransferase activity; MarR family transcriptional regulator 1520253 5606233 Spro_1391 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001477623.1 1519330 D 399741 CDS YP_001477624.1 157369635 5606234 complement(1520344..1520601) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein 1520601 5606234 Spro_1392 Serratia proteamaculans 568 hypothetical protein YP_001477624.1 1520344 R 399741 CDS YP_001477625.1 157369636 5606243 complement(1520805..1521062) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein 1521062 5606243 Spro_1393 Serratia proteamaculans 568 hypothetical protein YP_001477625.1 1520805 R 399741 CDS YP_001477626.1 157369637 5606244 1521238..1521882 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: sgl:SG2094 putative transcriptional repressor; TetR family transcriptional regulator 1521882 5606244 Spro_1394 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001477626.1 1521238 D 399741 CDS YP_001477627.1 157369638 5606245 complement(1521935..1522756) 1 NC_009832.1 PFAM: NLPA lipoprotein; KEGG: ent:Ent638_1773 NlpA lipoprotein; NLPA lipoprotein 1522756 5606245 Spro_1395 Serratia proteamaculans 568 NLPA lipoprotein YP_001477627.1 1521935 R 399741 CDS YP_001477628.1 157369639 5606255 complement(1522774..1523442) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1772 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1523442 5606255 Spro_1396 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477628.1 1522774 R 399741 CDS YP_001477629.1 157369640 5606256 complement(1523435..1524460) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_1771 ABC transporter related; ABC transporter-like protein 1524460 5606256 Spro_1397 Serratia proteamaculans 568 ABC transporter-like protein YP_001477629.1 1523435 R 399741 CDS YP_001477630.1 157369641 5606257 complement(1524710..1525153) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_3901 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 1525153 5606257 Spro_1398 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477630.1 1524710 R 399741 CDS YP_001477631.1 157369642 5606292 complement(1525181..1526071) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bte:BTH_I0388 transcriptional regulator, LysR family; LysR family transcriptional regulator 1526071 5606292 Spro_1399 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477631.1 1525181 R 399741 CDS YP_001477632.1 157369643 5606293 1526192..1527172 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bca:BCE_3496 quinone oxidoreductase; alcohol dehydrogenase 1527172 5606293 Spro_1400 Serratia proteamaculans 568 alcohol dehydrogenase YP_001477632.1 1526192 D 399741 CDS YP_001477633.1 157369644 5606294 1527231..1528103 1 NC_009832.1 KEGG: ppf:Pput_4568 hypothetical protein; hypothetical protein 1528103 5606294 Spro_1401 Serratia proteamaculans 568 hypothetical protein YP_001477633.1 1527231 D 399741 CDS YP_001477634.1 157369645 5606295 1528268..1529371 1 NC_009832.1 KEGG: ypi:YpsIP31758_2801 hypothetical protein; hypothetical protein 1529371 5606295 Spro_1402 Serratia proteamaculans 568 hypothetical protein YP_001477634.1 1528268 D 399741 CDS YP_001477635.1 157369646 5606296 1529399..1529926 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: she:Shewmr4_1847 isochorismatase hydrolase; isochorismatase hydrolase 1529926 5606296 Spro_1403 Serratia proteamaculans 568 isochorismatase hydrolase YP_001477635.1 1529399 D 399741 CDS YP_001477636.1 157369647 5606297 complement(1530023..1530769) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pae:PA1827 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1530769 5606297 Spro_1404 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001477636.1 1530023 R 399741 CDS YP_001477637.1 157369648 5606339 1530897..1531805 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1001 transcriptional regulator, LysR family; LysR family transcriptional regulator 1531805 5606339 Spro_1405 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477637.1 1530897 D 399741 CDS YP_001477638.1 157369649 5606340 1531990..1532997 1 NC_009832.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II 1532997 5606340 Spro_1406 Serratia proteamaculans 568 tryptophanyl-tRNA synthetase II YP_001477638.1 1531990 D 399741 CDS YP_001477639.1 157369650 5606341 complement(1533023..1534381) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW4319 predicted transporter; major facilitator transporter 1534381 5606341 Spro_1407 Serratia proteamaculans 568 major facilitator transporter YP_001477639.1 1533023 R 399741 CDS YP_001477640.1 157369651 5606374 complement(1534607..1535512) 1 NC_009832.1 PFAM: GntR domain protein; KEGG: ecj:JW5792 predicted DNA-binding transcriptional regulator; GntR family transcriptional regulator 1535512 5606374 Spro_1408 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001477640.1 1534607 R 399741 CDS YP_001477641.1 157369652 5606375 1535659..1536672 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ecs:ECs5318 putative oxidoreductase; alcohol dehydrogenase 1536672 5606375 Spro_1409 Serratia proteamaculans 568 alcohol dehydrogenase YP_001477641.1 1535659 D 399741 CDS YP_001477642.1 157369653 5606376 1536792..1537625 1 NC_009832.1 KEGG: yen:YE2878 putative ABC transport ATP-binding subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 1537625 5606376 Spro_1410 Serratia proteamaculans 568 phosphonate ABC transporter ATPase YP_001477642.1 1536792 D 399741 CDS YP_001477643.1 157369654 5606389 1537665..1538597 1 NC_009832.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: yen:YE2877 putative substrate-binding periplasmic transport protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 1538597 5606389 Spro_1411 Serratia proteamaculans 568 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001477643.1 1537665 D 399741 CDS YP_001477644.1 157369655 5606390 1538674..1539537 1 NC_009832.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2797 phosphonate ABC transporter, permease protein; phosphonate ABC transporter inner membrane subunit 1539537 5606390 Spro_1412 Serratia proteamaculans 568 phosphonate ABC transporter inner membrane subunit YP_001477644.1 1538674 D 399741 CDS YP_001477645.1 157369656 5606418 1539534..1540433 1 NC_009832.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2796 phosphonate ABC transporter, permease protein; phosphonate ABC transporter inner membrane subunit 1540433 5606418 Spro_1413 Serratia proteamaculans 568 phosphonate ABC transporter inner membrane subunit YP_001477645.1 1539534 D 399741 CDS YP_001477646.1 157369657 5606419 1540498..1541001 1 NC_009832.1 PFAM: protein of unknown function DUF1456; KEGG: yps:YPTB1227 hypothetical protein; hypothetical protein 1541001 5606419 Spro_1414 Serratia proteamaculans 568 hypothetical protein YP_001477646.1 1540498 D 399741 CDS YP_001477647.1 157369658 5606420 complement(1541308..1542948) 1 NC_009832.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1542948 5606420 Spro_1415 Serratia proteamaculans 568 methyl-accepting chemotaxis sensory transducer YP_001477647.1 1541308 R 399741 CDS YP_001477648.1 157369659 5606563 complement(1543452..1544948) 1 NC_009832.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: kpn:KPN_04684 putative sulfate transporter; sulfate transporter 1544948 5606563 Spro_1416 Serratia proteamaculans 568 sulfate transporter YP_001477648.1 1543452 R 399741 CDS YP_001477649.1 157369660 5606564 complement(1544945..1545556) 1 NC_009832.1 PFAM: carbonic anhydrase; KEGG: kpn:KPN_04685 putative carbonic anhdrase; carbonate dehydratase 1545556 5606564 Spro_1417 Serratia proteamaculans 568 carbonate dehydratase YP_001477649.1 1544945 R 399741 CDS YP_001477650.1 157369661 5606565 1546174..1548003 1 NC_009832.1 catalyzes the hydrolysis of allophanate; allophanate hydrolase 1548003 5606565 Spro_1418 Serratia proteamaculans 568 allophanate hydrolase YP_001477650.1 1546174 D 399741 CDS YP_001477651.1 157369662 5606607 1548006..1551629 1 NC_009832.1 TIGRFAM: urea amidolyase related protein; Urea carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: pmy:Pmen_0703 UreA amidolyase related protein; Urea carboxylase 1551629 5606607 Spro_1419 Serratia proteamaculans 568 Urea carboxylase YP_001477651.1 1548006 D 399741 CDS YP_001477652.1 157369663 5606608 1551681..1552391 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA2143 GntR-family transcriptional regulator; GntR family transcriptional regulator 1552391 5606608 Spro_1420 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001477652.1 1551681 D 399741 CDS YP_001477653.1 157369664 5606609 1552436..1553704 1 NC_009832.1 KEGG: ent:Ent638_1988 putative substrate-binding periplasmic transport protein; putative substrate-binding periplasmic transport protein 1553704 5606609 Spro_1421 Serratia proteamaculans 568 putative substrate-binding periplasmic transport protein YP_001477653.1 1552436 D 399741 CDS YP_001477654.1 157369665 5606674 1553948..1555528 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: yen:YE2872 putative branched-chain amino acid transport system, permease component; inner-membrane translocator 1555528 5606674 Spro_1422 Serratia proteamaculans 568 inner-membrane translocator YP_001477654.1 1553948 D 399741 CDS YP_001477655.1 157369666 5606675 1555528..1556604 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: yps:YPTB1230 ABC type branched-chain amino acid transporter, permease protein; inner-membrane translocator 1556604 5606675 Spro_1423 Serratia proteamaculans 568 inner-membrane translocator YP_001477655.1 1555528 D 399741 CDS YP_001477656.1 157369667 5606676 1556601..1557407 1 NC_009832.1 PFAM: ABC transporter related; KEGG: eca:ECA2147 putative ABC transport ATP-binding subunit; ABC transporter-like protein 1557407 5606676 Spro_1424 Serratia proteamaculans 568 ABC transporter-like protein YP_001477656.1 1556601 D 399741 CDS YP_001477657.1 157369668 5606683 1557416..1558114 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2148 putative ABC transport ATP-binding subunit; ABC transporter-like protein 1558114 5606683 Spro_1425 Serratia proteamaculans 568 ABC transporter-like protein YP_001477657.1 1557416 D 399741 CDS YP_001477658.1 157369669 5606684 1558258..1558770 1 NC_009832.1 KEGG: xau:Xaut_3206 hypothetical protein; hypothetical protein 1558770 5606684 Spro_1426 Serratia proteamaculans 568 hypothetical protein YP_001477658.1 1558258 D 399741 CDS YP_001477659.1 157369670 5606685 1558822..1558956 1 NC_009832.1 hypothetical protein 1558956 5606685 Spro_1427 Serratia proteamaculans 568 hypothetical protein YP_001477659.1 1558822 D 399741 CDS YP_001477660.1 157369671 5606773 complement(1558960..1559472) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_2567 acetyltransferase, GNAT family, putative; GCN5-like N-acetyltransferase 1559472 5606773 Spro_1428 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477660.1 1558960 R 399741 CDS YP_001477661.1 157369672 5606774 complement(1559697..1560914) 1 NC_009832.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: nwi:Nwi_2327 hypothetical protein; hypothetical protein 1560914 5606774 Spro_1429 Serratia proteamaculans 568 hypothetical protein YP_001477661.1 1559697 R 399741 CDS YP_001477662.1 157369673 5606775 complement(1560987..1561556) 1 NC_009832.1 KEGG: rle:RL4058 hypothetical protein; hypothetical protein 1561556 5606775 Spro_1430 Serratia proteamaculans 568 hypothetical protein YP_001477662.1 1560987 R 399741 CDS YP_001477663.1 157369674 5606779 1561662..1562531 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL4055 putative LysR family transcriptional regulator; LysR family transcriptional regulator 1562531 5606779 Spro_1431 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477663.1 1561662 D 399741 CDS YP_001477664.1 157369675 5606780 complement(1562528..1563373) 1 NC_009832.1 PFAM: Rhodanese domain protein; KEGG: yen:YE2868 putative sulfurtransferase; rhodanese domain-containing protein 1563373 5606780 Spro_1432 Serratia proteamaculans 568 rhodanese domain-containing protein YP_001477664.1 1562528 R 399741 CDS YP_001477665.1 157369676 5606822 complement(1563416..1565647) 1 NC_009832.1 KEGG: yen:YE2059 putative virulence factor; putative virulence factor 1565647 5606822 Spro_1433 Serratia proteamaculans 568 putative virulence factor YP_001477665.1 1563416 R 399741 CDS YP_001477666.1 157369677 5606823 complement(1565644..1568589) 1 NC_009832.1 PFAM: virulence protein SrfB; KEGG: yen:YE2058 putative virulence factor; virulence protein SrfB 1568589 5606823 Spro_1434 Serratia proteamaculans 568 virulence protein SrfB YP_001477666.1 1565644 R 399741 CDS YP_001477667.1 157369678 5606824 complement(1568589..1569797) 1 NC_009832.1 KEGG: eca:ECA2219 putative virulence effector protein; putative virulence effector protein 1569797 5606824 Spro_1435 Serratia proteamaculans 568 putative virulence effector protein YP_001477667.1 1568589 R 399741 CDS YP_001477668.1 157369679 5606881 1569912..1570337 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: ssa:SSA_0239 7,8-dihydro-8-oxoguanine-triphosphatase, putative; NUDIX hydrolase 1570337 5606881 Spro_1436 Serratia proteamaculans 568 NUDIX hydrolase YP_001477668.1 1569912 D 399741 CDS YP_001477669.1 157369680 5606882 complement(1570334..1570834) 1 NC_009832.1 PFAM: protein of unknown function DUF523; KEGG: eca:ECA1770 hypothetical protein; hypothetical protein 1570834 5606882 Spro_1437 Serratia proteamaculans 568 hypothetical protein YP_001477669.1 1570334 R 399741 CDS YP_001477670.1 157369681 5606883 complement(1570849..1571016) 1 NC_009832.1 hypothetical protein 1571016 5606883 Spro_1438 Serratia proteamaculans 568 hypothetical protein YP_001477670.1 1570849 R 399741 CDS YP_001477671.1 157369682 5606925 complement(1571013..1572035) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bld:BLi02818 hypothetical protein; AraC family transcriptional regulator 1572035 5606925 Spro_1439 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001477671.1 1571013 R 399741 CDS YP_001477672.1 157369683 5606926 complement(1572206..1573654) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pfo:Pfl_5531 aminotransferase, class I and II; transcriptional regulator 1573654 5606926 Spro_1440 Serratia proteamaculans 568 transcriptional regulator YP_001477672.1 1572206 R 399741 CDS YP_001477673.1 157369684 5606927 1573832..1574020 1 NC_009832.1 KEGG: pfo:Pfl_5530 hypothetical protein; hypothetical protein 1574020 5606927 Spro_1441 Serratia proteamaculans 568 hypothetical protein YP_001477673.1 1573832 D 399741 CDS YP_001477674.1 157369685 5607006 1574263..1575393 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE2867 hypothetical protein; oxidoreductase domain-containing protein 1575393 5607006 Spro_1442 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001477674.1 1574263 D 399741 CDS YP_001477675.1 157369686 5607007 complement(1575528..1577009) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_C0113 major facilitator superfamily (MFS) transporter; major facilitator transporter 1577009 5607007 Spro_1443 Serratia proteamaculans 568 major facilitator transporter YP_001477675.1 1575528 R 399741 CDS YP_001477676.1 157369687 5607008 1577484..1578551 1 NC_009832.1 PFAM: fatty acid desaturase; KEGG: yen:YE2866 putative fatty acid desaturase; fatty acid desaturase 1578551 5607008 Spro_1444 Serratia proteamaculans 568 fatty acid desaturase YP_001477676.1 1577484 D 399741 CDS YP_001477677.1 157369688 5607009 1578581..1579513 1 NC_009832.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: yen:YE2865 putative substrate-binding transport protein; glycine betaine ABC transporter substrate-binding protein 1579513 5607009 Spro_1445 Serratia proteamaculans 568 glycine betaine ABC transporter substrate-binding protein YP_001477677.1 1578581 D 399741 CDS YP_001477678.1 157369689 5607010 1579560..1580720 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2785 quaternary amine uptake ABC transporter (QAT) family, permease protein; binding-protein-dependent transport systems inner membrane component 1580720 5607010 Spro_1446 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477678.1 1579560 D 399741 CDS YP_001477679.1 157369690 5607011 1580717..1581652 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB1238 ABC type choline/glycine/betaine transporter, ATP-binding subunit; ABC transporter-like protein 1581652 5607011 Spro_1447 Serratia proteamaculans 568 ABC transporter-like protein YP_001477679.1 1580717 D 399741 CDS YP_001477680.1 157369691 5607124 1581649..1582431 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2783 quaternary amine uptake ABC transporter (QAT) family, permease protein; binding-protein-dependent transport systems inner membrane component 1582431 5607124 Spro_1448 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477680.1 1581649 D 399741 CDS YP_001477681.1 157369692 5607125 1582441..1583220 1 NC_009832.1 KEGG: yen:YE2861 hypothetical protein; hypothetical protein 1583220 5607125 Spro_1449 Serratia proteamaculans 568 hypothetical protein YP_001477681.1 1582441 D 399741 CDS YP_001477682.1 157369693 5607126 complement(1583272..1583448) 1 NC_009832.1 KEGG: plu:plu1523 hypothetical protein; hypothetical protein 1583448 5607126 Spro_1450 Serratia proteamaculans 568 hypothetical protein YP_001477682.1 1583272 R 399741 CDS YP_001477683.1 157369694 5607150 complement(1583551..1584474) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_2779 integral membrane protein; hypothetical protein 1584474 5607150 Spro_1451 Serratia proteamaculans 568 hypothetical protein YP_001477683.1 1583551 R 399741 CDS YP_001477684.1 157369695 5607151 complement(1584643..1585296) 1 NC_009832.1 KEGG: yen:YE4157 hypothetical protein; putative transcriptional regulator 1585296 5607151 Spro_1452 Serratia proteamaculans 568 putative transcriptional regulator YP_001477684.1 1584643 R 399741 CDS YP_001477685.1 157369696 5607192 1585401..1586855 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE4158 putative transport protein; major facilitator transporter 1586855 5607192 Spro_1453 Serratia proteamaculans 568 major facilitator transporter YP_001477685.1 1585401 D 399741 CDS YP_001477686.1 157369697 5607193 1586966..1587535 1 NC_009832.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sco:SCO6802 DNA-binding protein; XRE family transcriptional regulator 1587535 5607193 Spro_1454 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001477686.1 1586966 D 399741 CDS YP_001477687.1 157369698 5607194 1587538..1588056 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_3493 probable acetyltransferase protein; GCN5-like N-acetyltransferase 1588056 5607194 Spro_1455 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477687.1 1587538 D 399741 CDS YP_001477688.1 157369699 5607216 complement(1588133..1588963) 1 NC_009832.1 TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; PFAM: acid phosphatase (Class B); KEGG: oan:Oant_2497 5'-nucleotidase, lipoprotein E(P4) family; 5'-nucleotidase 1588963 5607216 Spro_1456 Serratia proteamaculans 568 5'-nucleotidase YP_001477688.1 1588133 R 399741 CDS YP_001477689.1 157369700 5607217 complement(1588985..1589836) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_04800 putative N-acetyltransferase; GCN5-like N-acetyltransferase 1589836 5607217 Spro_1457 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477689.1 1588985 R 399741 CDS YP_001477690.1 157369701 5607218 complement(1590028..1591125) 1 NC_009832.1 PFAM: porin Gram-negative type; KEGG: yen:YE2856 outer membrane protein C2; porin 1591125 5607218 Spro_1458 Serratia proteamaculans 568 porin YP_001477690.1 1590028 R 399741 CDS YP_001477691.1 157369702 5607242 1591521..1591838 1 NC_009832.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1591838 5607242 Spro_1459 Serratia proteamaculans 568 carboxymuconolactone decarboxylase YP_001477691.1 1591521 D 399741 CDS YP_001477692.1 157369703 5607243 1591843..1592277 1 NC_009832.1 KEGG: cvi:CV_3287 probable tautomerase; putative tautomerase 1592277 5607243 Spro_1460 Serratia proteamaculans 568 putative tautomerase YP_001477692.1 1591843 D 399741 CDS YP_001477693.1 157369704 5607244 1592292..1594490 1 NC_009832.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1594490 dinG 5607244 dinG Serratia proteamaculans 568 ATP-dependent DNA helicase DinG YP_001477693.1 1592292 D 399741 CDS YP_001477694.1 157369705 5607249 complement(1594491..1594925) 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: kpn:KPN_02209 putative regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system; AsnC family transcriptional regulator 1594925 5607249 Spro_1462 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001477694.1 1594491 R 399741 CDS YP_001477695.1 157369706 5607250 1595062..1595976 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ret:RHE_CH00327 putative transporter permease protein; hypothetical protein 1595976 5607250 Spro_1463 Serratia proteamaculans 568 hypothetical protein YP_001477695.1 1595062 D 399741 CDS YP_001477696.1 157369707 5607251 complement(1596024..1596929) 1 NC_009832.1 SMART: helix-turn-helix domain protein; KEGG: rpa:RPA1926 possible transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 1596929 5607251 Spro_1464 Serratia proteamaculans 568 helix-turn-helix domain-containing protein YP_001477696.1 1596024 R 399741 CDS YP_001477697.1 157369708 5607280 1596961..1598382 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA1925 putative transmembrane protein; major facilitator transporter 1598382 5607280 Spro_1465 Serratia proteamaculans 568 major facilitator transporter YP_001477697.1 1596961 D 399741 CDS YP_001477698.1 157369709 5607281 1598446..1599078 1 NC_009832.1 PFAM: Negative transcriptional regulator; KEGG: mlo:mll0013 transcriptional regulator; FMN-binding negative transcriptional regulator 1599078 5607281 Spro_1466 Serratia proteamaculans 568 FMN-binding negative transcriptional regulator YP_001477698.1 1598446 D 399741 CDS YP_001477699.1 157369710 5607282 1599118..1600077 1 NC_009832.1 PFAM: glycosyl transferase family 3; KEGG: ypp:YPDSF_1932 glycosyl transferase; glycosyl transferase family protein 1600077 5607282 Spro_1467 Serratia proteamaculans 568 glycosyl transferase family protein YP_001477699.1 1599118 D 399741 CDS YP_001477700.1 157369711 5607304 1600127..1601983 1 NC_009832.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: yen:YE2852 putative peptidase; peptidase M3A and M3B thimet/oligopeptidase F 1601983 5607304 Spro_1468 Serratia proteamaculans 568 peptidase M3A and M3B thimet/oligopeptidase F YP_001477700.1 1600127 D 399741 CDS YP_001477701.1 157369712 5607305 complement(1602047..1602685) 1 NC_009832.1 KEGG: son:SO0492 hypothetical flavoprotein oxygenase; flavoprotein oxygenase 1602685 5607305 Spro_1469 Serratia proteamaculans 568 flavoprotein oxygenase YP_001477701.1 1602047 R 399741 CDS YP_001477702.1 157369713 5607306 1602761..1603771 1 NC_009832.1 PFAM: protein of unknown function DUF890; KEGG: yen:YE2849 hypothetical protein; putative SAM-dependent methyltransferase 1603771 5607306 Spro_1470 Serratia proteamaculans 568 putative SAM-dependent methyltransferase YP_001477702.1 1602761 D 399741 CDS YP_001477703.1 157369714 5607334 1603992..1607000 1 NC_009832.1 KEGG: jan:Jann_4218 allergen V5/TPX-1 related; hypothetical protein 1607000 5607334 Spro_1471 Serratia proteamaculans 568 hypothetical protein YP_001477703.1 1603992 D 399741 CDS YP_001477704.1 157369715 5607335 1607323..1608627 1 NC_009832.1 KEGG: ypp:YPDSF_1927 chemotactic transducer; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer 1608627 5607335 Spro_1472 Serratia proteamaculans 568 Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer YP_001477704.1 1607323 D 399741 CDS YP_001477705.1 157369716 5607357 1608816..1609379 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: aha:AHA_0553 transcriptional regulator, TetR family; TetR family transcriptional regulator 1609379 5607357 Spro_1473 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001477705.1 1608816 D 399741 CDS YP_001477706.1 157369717 5607358 1609391..1610020 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbh:CLC_0910 acetyltransferase, GNAT family; GCN5-like N-acetyltransferase 1610020 5607358 Spro_1474 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477706.1 1609391 D 399741 CDS YP_001477707.1 157369718 5607359 1610017..1611024 1 NC_009832.1 KEGG: lwe:lwe1084 hydrolase family protein; hydrolase family protein 1611024 5607359 Spro_1475 Serratia proteamaculans 568 hydrolase family protein YP_001477707.1 1610017 D 399741 CDS YP_001477708.1 157369719 5607360 complement(1611031..1613244) 1 NC_009832.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sec:SC0822 paral putative transport protein; hypothetical protein 1613244 5607360 Spro_1476 Serratia proteamaculans 568 hypothetical protein YP_001477708.1 1611031 R 399741 CDS YP_001477709.1 157369720 5607361 complement(1613399..1614121) 1 NC_009832.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 1614121 glnQ 5607361 glnQ Serratia proteamaculans 568 glutamine ABC transporter ATP-binding protein YP_001477709.1 1613399 R 399741 CDS YP_001477710.1 157369721 5607362 complement(1614118..1614777) 1 NC_009832.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 1614777 glnP 5607362 glnP Serratia proteamaculans 568 glutamine ABC transporter permease YP_001477710.1 1614118 R 399741 CDS YP_001477711.1 157369722 5607366 complement(1614883..1615626) 1 NC_009832.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 1615626 glnH 5607366 glnH Serratia proteamaculans 568 glutamine ABC transporter periplasmic protein YP_001477711.1 1614883 R 399741 CDS YP_001477712.1 157369723 5607367 complement(1615974..1616240) 1 NC_009832.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: yen:YE2844 DksA/TraR C4-type zinc finger protein; hypothetical protein 1616240 5607367 Spro_1480 Serratia proteamaculans 568 hypothetical protein YP_001477712.1 1615974 R 399741 CDS YP_001477713.1 157369724 5607368 complement(1616400..1616903) 1 NC_009832.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 1616903 5607368 Spro_1481 Serratia proteamaculans 568 DNA starvation/stationary phase protection protein Dps YP_001477713.1 1616400 R 399741 CDS YP_001477714.1 157369725 5607401 complement(1617264..1617773) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_1296 hypothetical protein; hypothetical protein 1617773 5607401 Spro_1482 Serratia proteamaculans 568 hypothetical protein YP_001477714.1 1617264 R 399741 CDS YP_001477715.1 157369726 5607402 complement(1617877..1618764) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypi:YpsIP31758_1500 integral membrane protein; threonine and homoserine efflux system 1618764 5607402 Spro_1483 Serratia proteamaculans 568 threonine and homoserine efflux system YP_001477715.1 1617877 R 399741 CDS YP_001477716.1 157369727 5607403 1619163..1619681 1 NC_009832.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 1619681 ompX 5607403 ompX Serratia proteamaculans 568 outer membrane protein X YP_001477716.1 1619163 D 399741 CDS YP_001477717.1 157369728 5607424 complement(1619786..1620769) 1 NC_009832.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ent:Ent638_1888 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1620769 5607424 Spro_1485 Serratia proteamaculans 568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001477717.1 1619786 R 399741 CDS YP_001477718.1 157369729 5607425 1620863..1621738 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2048 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 1621738 5607425 Spro_1486 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477718.1 1620863 D 399741 CDS YP_001477719.1 157369730 5607426 complement(1621748..1622278) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0244 putative acetyltransferase, GnaT family; GCN5-like N-acetyltransferase 1622278 5607426 Spro_1487 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477719.1 1621748 R 399741 CDS YP_001477720.1 157369731 5603220 complement(1622332..1623702) 1 NC_009832.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; inner membrane permease YgbN 1623702 5603220 Spro_1488 Serratia proteamaculans 568 inner membrane permease YgbN YP_001477720.1 1622332 R 399741 CDS YP_001477721.1 157369732 5603221 complement(1623809..1624585) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: eca:ECA4330 putative isomerase; hydroxypyruvate isomerase 1624585 5603221 Spro_1489 Serratia proteamaculans 568 hydroxypyruvate isomerase YP_001477721.1 1623809 R 399741 CDS YP_001477722.1 157369733 5603222 complement(1624589..1625221) 1 NC_009832.1 PFAM: class II aldolase/adducin family protein; KEGG: yen:YE2502 putative class II aldolase-family protein; putative aldolase 1625221 5603222 Spro_1490 Serratia proteamaculans 568 putative aldolase YP_001477722.1 1624589 R 399741 CDS YP_001477723.1 157369734 5606965 complement(1625218..1626480) 1 NC_009832.1 PFAM: type III effector Hrp-dependent outers; KEGG: eca:ECA4328 hypothetical protein; Hrp-dependent type III effector protein 1626480 5606965 Spro_1491 Serratia proteamaculans 568 Hrp-dependent type III effector protein YP_001477723.1 1625218 R 399741 CDS YP_001477724.1 157369735 5606966 complement(1626480..1627394) 1 NC_009832.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: eca:ECA4327 putative oxidoreductase; 2-hydroxy-3-oxopropionate reductase 1627394 5606966 Spro_1492 Serratia proteamaculans 568 2-hydroxy-3-oxopropionate reductase YP_001477724.1 1626480 R 399741 CDS YP_001477725.1 157369736 5603617 1627676..1628440 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: eca:ECA4325 DeoR-family trancriptional regulator; DeoR family transcriptional regulator 1628440 5603617 Spro_1493 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001477725.1 1627676 D 399741 CDS YP_001477726.1 157369737 5603618 complement(1628656..1629141) 1 NC_009832.1 hypothetical protein 1629141 5603618 Spro_1494 Serratia proteamaculans 568 hypothetical protein YP_001477726.1 1628656 R 399741 CDS YP_001477727.1 157369738 5603619 complement(1629266..1630033) 1 NC_009832.1 PFAM: oxidoreductase molybdopterin binding; KEGG: psb:Psyr_3371 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 1630033 5603619 Spro_1495 Serratia proteamaculans 568 molybdopterin-binding oxidoreductase YP_001477727.1 1629266 R 399741 CDS YP_001477728.1 157369739 5603434 complement(1630026..1630631) 1 NC_009832.1 KEGG: psp:PSPPH_3292 HupC/HyaC/HydC family protein; HupC/HyaC/HydC family protein 1630631 5603434 Spro_1496 Serratia proteamaculans 568 HupC/HyaC/HydC family protein YP_001477728.1 1630026 R 399741 CDS YP_001477729.1 157369740 5603435 complement(1630646..1631272) 1 NC_009832.1 KEGG: pau:PA14_64560 hypothetical protein; hypothetical protein 1631272 5603435 Spro_1497 Serratia proteamaculans 568 hypothetical protein YP_001477729.1 1630646 R 399741 CDS YP_001477730.1 157369741 5603436 1631413..1632084 1 NC_009832.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pae:PA4885 two-component response regulator; two component heavy metal response transcriptional regulator 1632084 5603436 Spro_1498 Serratia proteamaculans 568 two component heavy metal response transcriptional regulator YP_001477730.1 1631413 D 399741 CDS YP_001477731.1 157369742 5604124 1632081..1633505 1 NC_009832.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: psb:Psyr_3375 heavy metal sensor kinase; heavy metal sensor signal transduction histidine kinase 1633505 5604124 Spro_1499 Serratia proteamaculans 568 heavy metal sensor signal transduction histidine kinase YP_001477731.1 1632081 D 399741 CDS YP_001477732.1 157369743 5604125 1634050..1634889 1 NC_009832.1 PFAM: transcriptional regulator domain protein; KEGG: ecp:ECP_4609 hypothetical protein; transcriptional regulator CadC 1634889 5604125 Spro_1500 Serratia proteamaculans 568 transcriptional regulator CadC YP_001477732.1 1634050 D 399741 CDS YP_001477733.1 157369744 5604126 1635048..1635677 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: reh:H16_B1626 response regulator, NarL-family; two component LuxR family transcriptional regulator 1635677 5604126 Spro_1501 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001477733.1 1635048 D 399741 CDS YP_001477734.1 157369745 5605403 1636113..1636700 1 NC_009832.1 KEGG: ecs:ECs0323 hypothetical protein; hypothetical protein 1636700 5605403 Spro_1502 Serratia proteamaculans 568 hypothetical protein YP_001477734.1 1636113 D 399741 CDS YP_001477735.1 157369746 5605404 1636781..1637449 1 NC_009832.1 KEGG: kpn:KPN_00292 hypothetical protein; hypothetical protein 1637449 5605404 Spro_1503 Serratia proteamaculans 568 hypothetical protein YP_001477735.1 1636781 D 399741 CDS YP_001477736.1 157369747 5605405 1637504..1640026 1 NC_009832.1 KEGG: kpn:KPN_00293 putative enzyme; hypothetical protein 1640026 5605405 Spro_1504 Serratia proteamaculans 568 hypothetical protein YP_001477736.1 1637504 D 399741 CDS YP_001477737.1 157369748 5602701 1640016..1641650 1 NC_009832.1 KEGG: kpn:KPN_00294 putative receptor; putative receptor 1641650 5602701 Spro_1505 Serratia proteamaculans 568 putative receptor YP_001477737.1 1640016 D 399741 CDS YP_001477738.1 157369749 5602702 1641660..1642322 1 NC_009832.1 KEGG: kpn:KPN_00295 hypothetical protein; hypothetical protein 1642322 5602702 Spro_1506 Serratia proteamaculans 568 hypothetical protein YP_001477738.1 1641660 D 399741 CDS YP_001477739.1 157369750 5602703 complement(1642319..1643785) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1643785 5602703 Spro_1507 Serratia proteamaculans 568 integral membrane sensor signal transduction histidine kinase YP_001477739.1 1642319 R 399741 CDS YP_001477740.1 157369751 5607442 complement(1643789..1644502) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1644502 5607442 Spro_1508 Serratia proteamaculans 568 two component transcriptional regulator YP_001477740.1 1643789 R 399741 CDS YP_001477741.1 157369752 5607443 1644650..1645261 1 NC_009832.1 KEGG: mms:mma_3541 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome subunit B (membrane anchoring protein) 1645261 5607443 Spro_1509 Serratia proteamaculans 568 thiosulfate reductase cytochrome subunit B (membrane anchoring protein) YP_001477741.1 1644650 D 399741 CDS YP_001477742.1 157369753 5607444 1645272..1646060 1 NC_009832.1 PFAM: oxidoreductase molybdopterin binding; KEGG: pol:Bpro_2730 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 1646060 5607444 Spro_1510 Serratia proteamaculans 568 molybdopterin-binding oxidoreductase YP_001477742.1 1645272 D 399741 CDS YP_001477743.1 157369754 5602801 1646101..1646424 1 NC_009832.1 TIGRFAM: Pentapeptide MXKDX repeat protein; KEGG: pol:Bpro_0540 hypothetical protein; pentapeptide MXKDX repeat-containing protein 1646424 5602801 Spro_1511 Serratia proteamaculans 568 pentapeptide MXKDX repeat-containing protein YP_001477743.1 1646101 D 399741 CDS YP_001477744.1 157369755 5602802 complement(1646501..1648540) 1 NC_009832.1 proton-motive-force-driven choline transporter; choline transport protein BetT 1648540 5602802 Spro_1512 Serratia proteamaculans 568 choline transport protein BetT YP_001477744.1 1646501 R 399741 CDS YP_001477745.1 157369756 5603623 1648953..1649549 1 NC_009832.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1649549 5603623 Spro_1513 Serratia proteamaculans 568 transcriptional regulator BetI YP_001477745.1 1648953 D 399741 CDS YP_001477746.1 157369757 5603624 1649570..1651042 1 NC_009832.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1651042 5603624 Spro_1514 Serratia proteamaculans 568 betaine aldehyde dehydrogenase YP_001477746.1 1649570 D 399741 CDS YP_001477747.1 157369758 5603625 1651113..1652780 1 NC_009832.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1652780 5603625 Spro_1515 Serratia proteamaculans 568 choline dehydrogenase YP_001477747.1 1651113 D 399741 CDS YP_001477748.1 157369759 5607439 complement(1652875..1654497) 1 NC_009832.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: pap:PSPA7_1539 hypothetical protein; ferredoxin-dependent glutamate synthase 1654497 5607439 Spro_1516 Serratia proteamaculans 568 ferredoxin-dependent glutamate synthase YP_001477748.1 1652875 R 399741 CDS YP_001477749.1 157369760 5607440 complement(1654677..1655267) 1 NC_009832.1 LuxR family transcriptional regulator 1655267 5607440 Spro_1517 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001477749.1 1654677 R 399741 CDS YP_001477750.1 157369761 5607441 complement(1655290..1656006) 1 NC_009832.1 PFAM: EAL domain protein; KEGG: kpn:KPN_03274 hypothetical protein; diguanylate phosphodiesterase 1656006 5607441 Spro_1518 Serratia proteamaculans 568 diguanylate phosphodiesterase YP_001477750.1 1655290 R 399741 CDS YP_001477751.1 157369762 5606539 1656522..1657049 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: bpd:BURPS668_2033 fimbrial protein; fimbrial protein 1657049 5606539 Spro_1519 Serratia proteamaculans 568 fimbrial protein YP_001477751.1 1656522 D 399741 CDS YP_001477752.1 157369763 5606540 1657121..1657804 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: kpn:KPN_02985 probable pilin chaperone; pili assembly chaperone 1657804 5606540 Spro_1520 Serratia proteamaculans 568 pili assembly chaperone YP_001477752.1 1657121 D 399741 CDS YP_001477753.1 157369764 5606541 1657833..1660448 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_02986 outer membrane protein; export and assembly of type 1 fimbriae; fimbrial biogenesis outer membrane usher protein 1660448 5606541 Spro_1521 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001477753.1 1657833 D 399741 CDS YP_001477754.1 157369765 5603157 1660460..1661503 1 NC_009832.1 KEGG: pae:PA0498 hypothetical protein; hypothetical protein 1661503 5603157 Spro_1522 Serratia proteamaculans 568 hypothetical protein YP_001477754.1 1660460 D 399741 CDS YP_001477755.1 157369766 5603158 complement(1661567..1662025) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein; AraC family transcriptional regulator 1662025 5603158 Spro_1523 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001477755.1 1661567 R 399741 CDS YP_001477756.1 157369767 5603159 complement(1662227..1663804) 1 NC_009832.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1663804 5603159 Spro_1524 Serratia proteamaculans 568 malate:quinone oxidoreductase YP_001477756.1 1662227 R 399741 CDS YP_001477757.1 157369768 5603620 complement(1664238..1665077) 1 NC_009832.1 PFAM: NmrA family protein; KEGG: stp:Strop_2997 NmrA family protein; NmrA family protein 1665077 5603620 Spro_1525 Serratia proteamaculans 568 NmrA family protein YP_001477757.1 1664238 R 399741 CDS YP_001477758.1 157369769 5603621 1665171..1665797 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: oan:Oant_1673 transcriptional regulator, TetR family; TetR family transcriptional regulator 1665797 5603621 Spro_1526 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001477758.1 1665171 D 399741 CDS YP_001477759.1 157369770 5603622 complement(1665794..1666408) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_L_237 hypothetical protein; GCN5-like N-acetyltransferase 1666408 5603622 Spro_1527 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477759.1 1665794 R 399741 CDS YP_001477760.1 157369771 5605380 complement(1666545..1667972) 1 NC_009832.1 PFAM: Alkaline phosphatase; KEGG: yen:YE2068 alkaline phosphatase precursor; alkaline phosphatase 1667972 5605380 Spro_1528 Serratia proteamaculans 568 alkaline phosphatase YP_001477760.1 1666545 R 399741 CDS YP_001477761.1 157369772 5605381 complement(1668110..1668817) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: mlo:mlr4954 glutathione S-transferase; glutathione S-transferase domain-containing protein 1668817 5605381 Spro_1529 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001477761.1 1668110 R 399741 CDS YP_001477762.1 157369773 5605382 1668996..1669343 1 NC_009832.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mlo:mll4602 hypothetical protein; antibiotic biosynthesis monooxygenase 1669343 5605382 Spro_1530 Serratia proteamaculans 568 antibiotic biosynthesis monooxygenase YP_001477762.1 1668996 D 399741 CDS YP_001477763.1 157369774 5603169 1669517..1670008 1 NC_009832.1 KEGG: pfl:PFL_3428 hypothetical protein; hypothetical protein 1670008 5603169 Spro_1531 Serratia proteamaculans 568 hypothetical protein YP_001477763.1 1669517 D 399741 CDS YP_001477764.1 157369775 5603170 complement(1670202..1670459) 1 NC_009832.1 KEGG: hch:HCH_03746 hypothetical protein; hypothetical protein 1670459 5603170 Spro_1532 Serratia proteamaculans 568 hypothetical protein YP_001477764.1 1670202 R 399741 CDS YP_001477765.1 157369776 5603171 complement(1670696..1671166) 1 NC_009832.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 1671166 5603171 Spro_1533 Serratia proteamaculans 568 cyanate hydratase YP_001477765.1 1670696 R 399741 CDS YP_001477766.1 157369777 5602564 complement(1671188..1671841) 1 NC_009832.1 PFAM: carbonic anhydrase; KEGG: bam:Bamb_5945 carbonate dehydratase; carbonate dehydratase 1671841 5602564 Spro_1534 Serratia proteamaculans 568 carbonate dehydratase YP_001477766.1 1671188 R 399741 CDS YP_001477767.1 157369778 5602565 1671956..1672858 1 NC_009832.1 controls the expression of the cynTSX operon involved in degrading and using cyanate as a sole nitrogen source; DNA-binding transcriptional regulator CynR 1672858 5602565 Spro_1535 Serratia proteamaculans 568 DNA-binding transcriptional regulator CynR YP_001477767.1 1671956 D 399741 CDS YP_001477768.1 157369779 5602566 1673012..1673299 1 NC_009832.1 hypothetical protein 1673299 5602566 Spro_1536 Serratia proteamaculans 568 hypothetical protein YP_001477768.1 1673012 D 399741 CDS YP_001477769.1 157369780 5604292 1673655..1674443 1 NC_009832.1 hypothetical protein 1674443 5604292 Spro_1537 Serratia proteamaculans 568 hypothetical protein YP_001477769.1 1673655 D 399741 CDS YP_001477770.1 157369781 5604293 1674572..1675450 1 NC_009832.1 hypothetical protein 1675450 5604293 Spro_1538 Serratia proteamaculans 568 hypothetical protein YP_001477770.1 1674572 D 399741 CDS YP_001477771.1 157369782 5604294 complement(1675591..1675905) 1 NC_009832.1 KEGG: mes:Meso_3017 hypothetical protein; hypothetical protein 1675905 5604294 Spro_1539 Serratia proteamaculans 568 hypothetical protein YP_001477771.1 1675591 R 399741 CDS YP_001477772.1 157369783 5602756 1676244..1678580 1 NC_009832.1 SMART: AAA ATPase; KEGG: ret:RHE_PE00189 hypothetical protein; AAA ATPase 1678580 5602756 Spro_1540 Serratia proteamaculans 568 AAA ATPase YP_001477772.1 1676244 D 399741 CDS YP_001477773.1 157369784 5602757 complement(1678649..1678960) 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: plu:plu4475 hypothetical protein; XRE family transcriptional regulator 1678960 5602757 Spro_1541 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001477773.1 1678649 R 399741 CDS YP_001477774.1 157369785 5603410 1679940..1680479 1 NC_009832.1 hypothetical protein 1680479 5603410 Spro_1542 Serratia proteamaculans 568 hypothetical protein YP_001477774.1 1679940 D 399741 CDS YP_001477775.1 157369786 5603411 complement(1680967..1681608) 1 NC_009832.1 PFAM: Resolvase domain; KEGG: gox:GOX2728 truncated transposon gamma-delta resolvase; resolvase domain-containing protein 1681608 5603411 Spro_1543 Serratia proteamaculans 568 resolvase domain-containing protein YP_001477775.1 1680967 R 399741 CDS YP_001477776.1 157369787 5603412 complement(1681671..1683182) 1 NC_009832.1 PFAM: Resolvase domain; Recombinase; KEGG: mms:mma_3169 site-specific recombinase; resolvase domain-containing protein 1683182 5603412 Spro_1544 Serratia proteamaculans 568 resolvase domain-containing protein YP_001477776.1 1681671 R 399741 CDS YP_001477777.1 157369788 5603178 1683245..1684813 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA3010 ABC transporter ATP-binding protein; ABC transporter-like protein 1684813 5603178 Spro_1545 Serratia proteamaculans 568 ABC transporter-like protein YP_001477777.1 1683245 D 399741 CDS YP_001477778.1 157369789 5603179 complement(1684870..1685625) 1 NC_009832.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 1685625 5603179 Spro_1546 Serratia proteamaculans 568 molybdopterin biosynthesis protein MoeB YP_001477778.1 1684870 R 399741 CDS YP_001477779.1 157369790 5603180 complement(1685628..1686866) 1 NC_009832.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 1686866 5603180 Spro_1547 Serratia proteamaculans 568 molybdopterin biosynthesis protein MoeA YP_001477779.1 1685628 R 399741 CDS YP_001477780.1 157369791 5604915 1686961..1687497 1 NC_009832.1 PFAM: protein of unknown function DUF924; KEGG: yen:YE2827 hypothetical protein; hypothetical protein 1687497 5604915 Spro_1548 Serratia proteamaculans 568 hypothetical protein YP_001477780.1 1686961 D 399741 CDS YP_001477781.1 157369792 5604916 1687842..1688789 1 NC_009832.1 PFAM: peptidase T2 asparaginase 2; KEGG: eca:ECA0132 L-asparaginase; peptidase T2 asparaginase 2 1688789 5604916 Spro_1549 Serratia proteamaculans 568 peptidase T2 asparaginase 2 YP_001477781.1 1687842 D 399741 CDS YP_001477782.1 157369793 5604917 1688874..1690751 1 NC_009832.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: eca:ECA2835 putative ABC transporter ATP-binding protein; ABC transporter-like protein 1690751 5604917 Spro_1550 Serratia proteamaculans 568 ABC transporter-like protein YP_001477782.1 1688874 D 399741 CDS YP_001477783.1 157369794 5602585 1690775..1692313 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2834 putative ABC transporter periplasmic binding protein; extracellular solute-binding protein 1692313 5602585 Spro_1551 Serratia proteamaculans 568 extracellular solute-binding protein YP_001477783.1 1690775 D 399741 CDS YP_001477784.1 157369795 5602586 1692364..1693284 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2833 putative ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1693284 5602586 Spro_1552 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477784.1 1692364 D 399741 CDS YP_001477785.1 157369796 5602587 1693294..1694202 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_1326 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1694202 5602587 Spro_1553 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477785.1 1693294 D 399741 CDS YP_001477786.1 157369797 5602626 1694800..1695036 1 NC_009832.1 PFAM: Post-segregation antitoxin CcdA; KEGG: yen:YE3481 gyrase inhibitor antitoxin; post-segregation antitoxin CcdA 1695036 5602626 Spro_1554 Serratia proteamaculans 568 post-segregation antitoxin CcdA YP_001477786.1 1694800 D 399741 CDS YP_001477787.1 157369798 5602627 1695039..1695353 1 NC_009832.1 PFAM: CcdB protein; KEGG: yen:YE3480 cytotoxic protein; CcdB protein 1695353 5602627 Spro_1555 Serratia proteamaculans 568 CcdB protein YP_001477787.1 1695039 D 399741 CDS YP_001477788.1 157369799 5602628 complement(1695390..1696232) 1 NC_009832.1 KEGG: yen:YE2822 putative esterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 1696232 5602628 Spro_1556 Serratia proteamaculans 568 S-formylglutathione hydrolase YP_001477788.1 1695390 R 399741 CDS YP_001477789.1 157369800 5602686 complement(1696247..1697374) 1 NC_009832.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE2821 probable alcohol dehydrogenase; S-(hydroxymethyl)glutathione dehydrogenase 1697374 5602686 Spro_1557 Serratia proteamaculans 568 S-(hydroxymethyl)glutathione dehydrogenase YP_001477789.1 1696247 R 399741 CDS YP_001477790.1 157369801 5602687 complement(1697401..1698318) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2820 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 1698318 5602687 Spro_1558 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477790.1 1697401 R 399741 CDS YP_001477791.1 157369802 5602688 1698425..1699582 1 NC_009832.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: yen:YE2819 hypothetical protein; hypothetical protein 1699582 5602688 Spro_1559 Serratia proteamaculans 568 hypothetical protein YP_001477791.1 1698425 D 399741 CDS YP_001477792.1 157369803 5602739 1699830..1700495 1 NC_009832.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1700495 folE 5602739 folE Serratia proteamaculans 568 GTP cyclohydrolase I YP_001477792.1 1699830 D 399741 CDS YP_001477793.1 157369804 5602740 1700566..1701747 1 NC_009832.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: yen:YE2817 hypothetical protein; hypothetical protein 1701747 5602740 Spro_1561 Serratia proteamaculans 568 hypothetical protein YP_001477793.1 1700566 D 399741 CDS YP_001477794.1 157369805 5602741 1701877..1702914 1 NC_009832.1 negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 1702914 5602741 Spro_1562 Serratia proteamaculans 568 DNA-binding transcriptional regulator GalS YP_001477794.1 1701877 D 399741 CDS YP_001477795.1 157369806 5602748 1703171..1704163 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2815 galactose-binding protein; periplasmic binding protein/LacI transcriptional regulator 1704163 5602748 Spro_1563 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001477795.1 1703171 D 399741 CDS YP_001477796.1 157369807 5602749 1704329..1705837 1 NC_009832.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 1705837 5602749 Spro_1564 Serratia proteamaculans 568 galactose/methyl galaxtoside transporter ATP-binding protein YP_001477796.1 1704329 D 399741 CDS YP_001477797.1 157369808 5602750 1705849..1706859 1 NC_009832.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane component 1706859 mglC 5602750 mglC Serratia proteamaculans 568 beta-methylgalactoside transporter inner membrane component YP_001477797.1 1705849 D 399741 CDS YP_001477798.1 157369809 5602865 complement(1707105..1707848) 1 NC_009832.1 PFAM: protein of unknown function DUF218; KEGG: yen:YE2795 hypothetical protein; hypothetical protein 1707848 5602865 Spro_1566 Serratia proteamaculans 568 hypothetical protein YP_001477798.1 1707105 R 399741 CDS YP_001477799.1 157369810 5602866 complement(1708018..1709715) 1 NC_009832.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1709715 5602866 Spro_1567 Serratia proteamaculans 568 malate dehydrogenase YP_001477799.1 1708018 R 399741 CDS YP_001477800.1 157369811 5602890 complement(1709937..1710821) 1 NC_009832.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1710821 5602890 Spro_1568 Serratia proteamaculans 568 cytidine deaminase YP_001477800.1 1709937 R 399741 CDS YP_001477801.1 157369812 5602891 complement(1710959..1711654) 1 NC_009832.1 PFAM: LrgB family protein; KEGG: yen:YE2791 hypothetical protein; hypothetical protein 1711654 5602891 Spro_1569 Serratia proteamaculans 568 hypothetical protein YP_001477801.1 1710959 R 399741 CDS YP_001477802.1 157369813 5602892 complement(1711651..1712058) 1 NC_009832.1 PFAM: LrgA family protein; KEGG: yen:YE2790 hypothetical protein; hypothetical protein 1712058 5602892 Spro_1570 Serratia proteamaculans 568 hypothetical protein YP_001477802.1 1711651 R 399741 CDS YP_001477803.1 157369814 5602896 complement(1712195..1713418) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2789 putative multidrug resistance protein; major facilitator transporter 1713418 5602896 Spro_1571 Serratia proteamaculans 568 major facilitator transporter YP_001477803.1 1712195 R 399741 CDS YP_001477804.1 157369815 5602897 1713663..1714148 1 NC_009832.1 PFAM: protein of unknown function DUF559; KEGG: pla:Plav_1553 protein of unknown function DUF559; hypothetical protein 1714148 5602897 Spro_1572 Serratia proteamaculans 568 hypothetical protein YP_001477804.1 1713663 D 399741 CDS YP_001477805.1 157369816 5602898 complement(1714154..1716181) 1 NC_009832.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1716181 metG 5602898 metG Serratia proteamaculans 568 methionyl-tRNA synthetase YP_001477805.1 1714154 R 399741 CDS YP_001477806.1 157369817 5602920 1716341..1717453 1 NC_009832.1 KEGG: yen:YE2784 hypothetical protein; putative ATPase 1717453 5602920 Spro_1574 Serratia proteamaculans 568 putative ATPase YP_001477806.1 1716341 D 399741 CDS YP_001477807.1 157369818 5602921 complement(1717505..1718134) 1 NC_009832.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sgl:SG0972 hypothetical protein; PA-phosphatase-like phosphoesterase 1718134 5602921 Spro_1575 Serratia proteamaculans 568 PA-phosphatase-like phosphoesterase YP_001477807.1 1717505 R 399741 CDS YP_001477808.1 157369819 5602922 1718381..1719022 1 NC_009832.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1719022 5602922 Spro_1576 Serratia proteamaculans 568 uridine kinase YP_001477808.1 1718381 D 399741 CDS YP_001477809.1 157369820 5602947 1719149..1719730 1 NC_009832.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1719730 dcd 5602947 dcd Serratia proteamaculans 568 deoxycytidine triphosphate deaminase YP_001477809.1 1719149 D 399741 CDS YP_001477810.1 157369821 5602948 1719775..1721610 1 NC_009832.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; putative assembly protein 1721610 5602948 Spro_1578 Serratia proteamaculans 568 putative assembly protein YP_001477810.1 1719775 D 399741 CDS YP_001477811.1 157369822 5602949 1721807..1723165 1 NC_009832.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1723165 dcuC 5602949 dcuC Serratia proteamaculans 568 C4-dicarboxylate transporter DcuC YP_001477811.1 1721807 D 399741 CDS YP_001477812.1 157369823 5603035 complement(1723194..1724780) 1 NC_009832.1 PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: yen:YE2779 hypothetical protein; integral membrane protein TerC 1724780 5603035 Spro_1580 Serratia proteamaculans 568 integral membrane protein TerC YP_001477812.1 1723194 R 399741 CDS YP_001477813.1 157369824 5603036 1725426..1726340 1 NC_009832.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2778 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1726340 5603036 Spro_1581 Serratia proteamaculans 568 UTP-glucose-1-phosphate uridylyltransferase YP_001477813.1 1725426 D 399741 CDS YP_001477814.1 157369825 5603037 1726386..1727279 1 NC_009832.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: yen:YE2777 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1727279 5603037 Spro_1582 Serratia proteamaculans 568 UTP-glucose-1-phosphate uridylyltransferase YP_001477814.1 1726386 D 399741 CDS YP_001477815.1 157369826 5603123 1727572..1728708 1 NC_009832.1 PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein 1728708 5603123 Spro_1583 Serratia proteamaculans 568 polysaccharide export protein YP_001477815.1 1727572 D 399741 CDS YP_001477816.1 157369827 5603124 1728718..1729152 1 NC_009832.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: kpn:KPN_02511 protein tyrosine phosphatase; protein tyrosine phosphatase 1729152 5603124 Spro_1584 Serratia proteamaculans 568 protein tyrosine phosphatase YP_001477816.1 1728718 D 399741 CDS YP_001477817.1 157369828 5603125 1729172..1731346 1 NC_009832.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: kpn:KPN_02510 tyrosine autokinase; non-specific protein-tyrosine kinase 1731346 5603125 Spro_1585 Serratia proteamaculans 568 non-specific protein-tyrosine kinase YP_001477817.1 1729172 D 399741 CDS YP_001477818.1 157369829 5603136 1731502..1732785 1 NC_009832.1 hypothetical protein 1732785 5603136 Spro_1586 Serratia proteamaculans 568 hypothetical protein YP_001477818.1 1731502 D 399741 CDS YP_001477819.1 157369830 5603137 1733326..1734093 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: mba:Mbar_A0239 mannosyltransferase; group 1 glycosyl transferase 1734093 5603137 Spro_1587 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477819.1 1733326 D 399741 CDS YP_001477820.1 157369831 5603138 1734174..1735298 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: cac:CAC3057 glycosyltransferase; group 1 glycosyl transferase 1735298 5603138 Spro_1588 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477820.1 1734174 D 399741 CDS YP_001477821.1 157369832 5603541 1735359..1736432 1 NC_009832.1 hypothetical protein 1736432 5603541 Spro_1589 Serratia proteamaculans 568 hypothetical protein YP_001477821.1 1735359 D 399741 CDS YP_001477822.1 157369833 5603542 1736456..1737613 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: bfr:BF3922 probable mannosyltransferase; group 1 glycosyl transferase 1737613 5603542 Spro_1590 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477822.1 1736456 D 399741 CDS YP_001477823.1 157369834 5603543 1737697..1739136 1 NC_009832.1 PFAM: polysaccharide biosynthesis protein; KEGG: fjo:Fjoh_2240 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1739136 5603543 Spro_1591 Serratia proteamaculans 568 polysaccharide biosynthesis protein YP_001477823.1 1737697 D 399741 CDS YP_001477824.1 157369835 5603564 1739197..1740237 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH3663 lipopolysaccharide biosynthesis; group 1 glycosyl transferase 1740237 5603564 Spro_1592 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477824.1 1739197 D 399741 CDS YP_001477825.1 157369836 5603565 1740308..1741288 1 NC_009832.1 KEGG: pst:PSPTO_5546 hypothetical protein; hypothetical protein 1741288 5603565 Spro_1593 Serratia proteamaculans 568 hypothetical protein YP_001477825.1 1740308 D 399741 CDS YP_001477826.1 157369837 5603678 1741492..1742886 1 NC_009832.1 WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; putative UDP-glucose lipid carrier transferase 1742886 5603678 Spro_1594 Serratia proteamaculans 568 putative UDP-glucose lipid carrier transferase YP_001477826.1 1741492 D 399741 CDS YP_001477827.1 157369838 5603679 1743356..1745944 1 NC_009832.1 KEGG: ava:Ava_4160 VCBS; hypothetical protein 1745944 5603679 Spro_1595 Serratia proteamaculans 568 hypothetical protein YP_001477827.1 1743356 D 399741 CDS YP_001477828.1 157369839 5603680 1746330..1748096 1 NC_009832.1 KEGG: plu:plu0657 ATP-binding protein PrtB; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1748096 5603680 Spro_1596 Serratia proteamaculans 568 type I secretion system ATPase YP_001477828.1 1746330 D 399741 CDS YP_001477829.1 157369840 5603741 1748151..1749482 1 NC_009832.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: plu:plu0658 membrane fusion protein PrtC; HlyD family type I secretion membrane fusion protein 1749482 5603741 Spro_1597 Serratia proteamaculans 568 HlyD family type I secretion membrane fusion protein YP_001477829.1 1748151 D 399741 CDS YP_001477830.1 157369841 5603742 1749485..1750864 1 NC_009832.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: plu:plu0659 outer membrane protein PrtD; TolC family type I secretion outer membrane protein 1750864 5603742 Spro_1598 Serratia proteamaculans 568 TolC family type I secretion outer membrane protein YP_001477830.1 1749485 D 399741 CDS YP_001477831.1 157369842 5603743 1751171..1752595 1 NC_009832.1 KEGG: eca:ECA1438 mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1752595 5603743 Spro_1599 Serratia proteamaculans 568 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001477831.1 1751171 D 399741 CDS YP_001477832.1 157369843 5603749 1752611..1753978 1 NC_009832.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: ent:Ent638_2662 phosphomannomutase; phosphomannomutase 1753978 5603749 Spro_1600 Serratia proteamaculans 568 phosphomannomutase YP_001477832.1 1752611 D 399741 CDS YP_001477833.1 157369844 5603750 1754195..1755208 1 NC_009832.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: plu:plu4831 UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase); UDP-glucose 4-epimerase 1755208 5603750 Spro_1601 Serratia proteamaculans 568 UDP-glucose 4-epimerase YP_001477833.1 1754195 D 399741 CDS YP_001477834.1 157369845 5603751 1755708..1756745 1 NC_009832.1 TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: eca:ECA1416 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 1756745 5603751 Spro_1602 Serratia proteamaculans 568 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_001477834.1 1755708 D 399741 CDS YP_001477835.1 157369846 5603755 complement(1756838..1757986) 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: sdy:SDY_PA04 RfpB; group 1 glycosyl transferase 1757986 5603755 Spro_1603 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477835.1 1756838 R 399741 CDS YP_001477836.1 157369847 5603756 complement(1758001..1759089) 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: asa:ASA_1456 glycosyltransferase; group 1 glycosyl transferase 1759089 5603756 Spro_1604 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001477836.1 1758001 R 399741 CDS YP_001477837.1 157369848 5603757 complement(1759098..1759742) 1 NC_009832.1 hypothetical protein 1759742 5603757 Spro_1605 Serratia proteamaculans 568 hypothetical protein YP_001477837.1 1759098 R 399741 CDS YP_001477838.1 157369849 5603778 complement(1760070..1761308) 1 NC_009832.1 PFAM: polysaccharide biosynthesis protein; KEGG: vfi:VF0170 flippase; polysaccharide biosynthesis protein 1761308 5603778 Spro_1606 Serratia proteamaculans 568 polysaccharide biosynthesis protein YP_001477838.1 1760070 R 399741 CDS YP_001477839.1 157369850 5603779 complement(1761289..1762383) 1 NC_009832.1 hypothetical protein 1762383 5603779 Spro_1607 Serratia proteamaculans 568 hypothetical protein YP_001477839.1 1761289 R 399741 CDS YP_001477840.1 157369851 5603780 1762868..1764274 1 NC_009832.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1764274 5603780 Spro_1608 Serratia proteamaculans 568 6-phosphogluconate dehydrogenase YP_001477840.1 1762868 D 399741 CDS YP_001477841.1 157369852 5603802 complement(1764347..1764961) 1 NC_009832.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1764961 5603802 Spro_1609 Serratia proteamaculans 568 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein YP_001477841.1 1764347 R 399741 CDS YP_001477842.1 157369853 5603803 complement(1764955..1765731) 1 NC_009832.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1765731 5603803 Spro_1610 Serratia proteamaculans 568 imidazole glycerol phosphate synthase subunit HisF YP_001477842.1 1764955 R 399741 CDS YP_001477843.1 157369854 5603804 complement(1765713..1766450) 1 NC_009832.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1766450 5603804 Spro_1611 Serratia proteamaculans 568 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001477843.1 1765713 R 399741 CDS YP_001477844.1 157369855 5603824 complement(1766456..1767046) 1 NC_009832.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1767046 hisH 5603824 hisH Serratia proteamaculans 568 imidazole glycerol phosphate synthase subunit HisH YP_001477844.1 1766456 R 399741 CDS YP_001477845.1 157369856 5603825 complement(1767046..1768113) 1 NC_009832.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1768113 5603825 Spro_1613 Serratia proteamaculans 568 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_001477845.1 1767046 R 399741 CDS YP_001477846.1 157369857 5603826 complement(1768110..1769198) 1 NC_009832.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1769198 5603826 Spro_1614 Serratia proteamaculans 568 histidinol-phosphate aminotransferase YP_001477846.1 1768110 R 399741 CDS YP_001477847.1 157369858 5603833 complement(1769195..1770502) 1 NC_009832.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1770502 hisD 5603833 hisD Serratia proteamaculans 568 histidinol dehydrogenase YP_001477847.1 1769195 R 399741 CDS YP_001477848.1 157369859 5603834 complement(1770507..1771406) 1 NC_009832.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 1771406 hisG 5603834 hisG Serratia proteamaculans 568 ATP phosphoribosyltransferase YP_001477848.1 1770507 R 399741 CDS YP_001477849.1 157369860 5603835 1771856..1772680 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: yen:YE2764 hypothetical protein; NAD-dependent epimerase/dehydratase 1772680 5603835 Spro_1617 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001477849.1 1771856 D 399741 CDS YP_001477850.1 157369861 5603845 complement(1772736..1773653) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA1145 probable transcriptional regulator; LysR family transcriptional regulator 1773653 5603845 Spro_1618 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477850.1 1772736 R 399741 CDS YP_001477851.1 157369862 5603846 1773902..1774834 1 NC_009832.1 TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bmn:BMA10247_A0674 agmatinase; putative agmatinase 1774834 5603846 Spro_1619 Serratia proteamaculans 568 putative agmatinase YP_001477851.1 1773902 D 399741 CDS YP_001477852.1 157369863 5603862 1774906..1776288 1 NC_009832.1 PFAM: Na+/solute symporter; KEGG: pae:PA1418 probable sodium:solute symport protein; Na+/solute symporter 1776288 5603862 Spro_1620 Serratia proteamaculans 568 Na+/solute symporter YP_001477852.1 1774906 D 399741 CDS YP_001477853.1 157369864 5603863 complement(1776329..1777309) 1 NC_009832.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: reh:H16_A0087 putative Mg2+ and Co2+ transporter; Mg2 transporter protein CorA family protein 1777309 5603863 Spro_1621 Serratia proteamaculans 568 Mg2 transporter protein CorA family protein YP_001477853.1 1776329 R 399741 CDS YP_001477854.1 157369865 5603864 complement(1777321..1777740) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_01386 histone acetyltransferase HPA2/related acetyltransferase; GCN5-like N-acetyltransferase 1777740 5603864 Spro_1622 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001477854.1 1777321 R 399741 CDS YP_001477855.1 157369866 5603883 complement(1777923..1778543) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: pfl:PFL_1771 glutathione S-transferase; glutathione S-transferase domain-containing protein 1778543 5603883 Spro_1623 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001477855.1 1777923 R 399741 CDS YP_001477856.1 157369867 5603884 complement(1778648..1779304) 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: yen:YE1464 putative hydrolase; HAD family hydrolase 1779304 5603884 Spro_1624 Serratia proteamaculans 568 HAD family hydrolase YP_001477856.1 1778648 R 399741 CDS YP_001477857.1 157369868 5603885 1779598..1780617 1 NC_009832.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: yen:YE1465 putative iron/ascorbate oxidoreductase family protein; 2OG-Fe(II) oxygenase 1780617 5603885 Spro_1625 Serratia proteamaculans 568 2OG-Fe(II) oxygenase YP_001477857.1 1779598 D 399741 CDS YP_001477858.1 157369869 5603933 complement(1780703..1781848) 1 NC_009832.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: yen:YE1469 putative cystathionine gamma-synthase; cystathionine gamma-synthase 1781848 5603933 Spro_1626 Serratia proteamaculans 568 cystathionine gamma-synthase YP_001477858.1 1780703 R 399741 CDS YP_001477859.1 157369870 5603934 complement(1781862..1783229) 1 NC_009832.1 PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: yen:YE1470 cystathionine beta-lyase; pyridoxal-5'-phosphate-dependent protein subunit beta 1783229 5603934 Spro_1627 Serratia proteamaculans 568 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001477859.1 1781862 R 399741 CDS YP_001477860.1 157369871 5603935 1783695..1784900 1 NC_009832.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: yen:YE1471 D-alanyl-D-alanine carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase 1784900 5603935 Spro_1628 Serratia proteamaculans 568 Serine-type D-Ala-D-Ala carboxypeptidase YP_001477860.1 1783695 D 399741 CDS YP_001477861.1 157369872 5603986 complement(1784964..1786331) 1 NC_009832.1 KEGG: yen:YE1472 L-serine dehydratase 2; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 1786331 5603986 Spro_1629 Serratia proteamaculans 568 L-serine dehydratase 1 YP_001477861.1 1784964 R 399741 CDS YP_001477862.1 157369873 5603987 complement(1786423..1787718) 1 NC_009832.1 TIGRFAM: serine transporter; PFAM: aromatic amino acid permease; KEGG: yen:YE1473 serine transporter; serine transporter 1787718 5603987 Spro_1630 Serratia proteamaculans 568 serine transporter YP_001477862.1 1786423 R 399741 CDS YP_001477863.1 157369874 5603988 complement(1788688..1789530) 1 NC_009832.1 PFAM: regulatory protein DeoR; KEGG: yen:YE1474 deoxyribose operon repressor; DNA-binding transcriptional repressor DeoR 1789530 5603988 Spro_1631 Serratia proteamaculans 568 DNA-binding transcriptional repressor DeoR YP_001477863.1 1788688 R 399741 CDS YP_001477864.1 157369875 5603995 complement(1789598..1790278) 1 NC_009832.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 1790278 5603995 Spro_1632 Serratia proteamaculans 568 deoxyribose-phosphate aldolase YP_001477864.1 1789598 R 399741 CDS YP_001477865.1 157369876 5603996 1790494..1791336 1 NC_009832.1 KEGG: yen:YE2065 hypothetical protein; hypothetical protein 1791336 5603996 Spro_1633 Serratia proteamaculans 568 hypothetical protein YP_001477865.1 1790494 D 399741 CDS YP_001477866.1 157369877 5603997 complement(1791373..1791978) 1 NC_009832.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: yen:YE1476 putative permease; undecaprenyl pyrophosphate phosphatase 1791978 5603997 Spro_1634 Serratia proteamaculans 568 undecaprenyl pyrophosphate phosphatase YP_001477866.1 1791373 R 399741 CDS YP_001477867.1 157369878 5603998 complement(1791984..1792736) 1 NC_009832.1 KEGG: yen:YE1477 hypothetical protein; hypothetical protein 1792736 5603998 Spro_1635 Serratia proteamaculans 568 hypothetical protein YP_001477867.1 1791984 R 399741 CDS YP_001477868.1 157369879 5603999 1792873..1793712 1 NC_009832.1 PFAM: purine or other phosphorylase family 1; KEGG: btl:BALH_2989 putative 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; purine phosphorylase family 1 1793712 5603999 Spro_1636 Serratia proteamaculans 568 purine phosphorylase family 1 YP_001477868.1 1792873 D 399741 CDS YP_001477869.1 157369880 5604000 1793854..1794366 1 NC_009832.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 1794366 5604000 Spro_1637 Serratia proteamaculans 568 ecotin YP_001477869.1 1793854 D 399741 CDS YP_001477870.1 157369881 5604015 1794609..1795577 1 NC_009832.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pfl:PFL_3440 serine/threonine dehydratase family protein; pyridoxal-5'-phosphate-dependent protein subunit beta 1795577 5604015 Spro_1638 Serratia proteamaculans 568 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001477870.1 1794609 D 399741 CDS YP_001477871.1 157369882 5604016 complement(1795781..1797469) 1 NC_009832.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: yen:YE1478 TrkA, potassium channel-family protein; hypothetical protein 1797469 5604016 Spro_1639 Serratia proteamaculans 568 hypothetical protein YP_001477871.1 1795781 R 399741 CDS YP_001477872.1 157369883 5604017 1797785..1798165 1 NC_009832.1 KEGG: eca:ECA2682 hypothetical protein; hypothetical protein 1798165 5604017 Spro_1640 Serratia proteamaculans 568 hypothetical protein YP_001477872.1 1797785 D 399741 CDS YP_001477873.1 157369884 5604047 complement(1798217..1798480) 1 NC_009832.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1 1798480 grxA 5604047 grxA Serratia proteamaculans 568 glutaredoxin 1 YP_001477873.1 1798217 R 399741 CDS YP_001477874.1 157369885 5604048 1798677..1799027 1 NC_009832.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein 1799027 5604048 Spro_1642 Serratia proteamaculans 568 hypothetical protein YP_001477874.1 1798677 D 399741 CDS YP_001477875.1 157369886 5604049 1799085..1799987 1 NC_009832.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: stm:STM0875 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 1799987 5604049 Spro_1643 Serratia proteamaculans 568 alpha-L-glutamate ligase YP_001477875.1 1799085 D 399741 CDS YP_001477876.1 157369887 5604062 1800149..1800628 1 NC_009832.1 KEGG: ypi:YpsIP31758_2646 hypothetical protein; hypothetical protein 1800628 5604062 Spro_1644 Serratia proteamaculans 568 hypothetical protein YP_001477876.1 1800149 D 399741 CDS YP_001477877.1 157369888 5604063 1801037..1802146 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_2645 putrescine ABC transporter, periplasmic putrescine binding protein; putrescine ABC transporter periplasmic-binding protein 1802146 5604063 Spro_1645 Serratia proteamaculans 568 putrescine ABC transporter periplasmic-binding protein YP_001477877.1 1801037 D 399741 CDS YP_001477878.1 157369889 5604082 1802282..1803415 1 NC_009832.1 part of the PotFGHI ATP-dependent putrescine transporter; putrescine transporter ATP-binding subunit 1803415 potG 5604082 potG Serratia proteamaculans 568 putrescine transporter ATP-binding subunit YP_001477878.1 1802282 D 399741 CDS YP_001477879.1 157369890 5604083 1803441..1804406 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1486 putrescine transport system permease protein; putrescine ABC transporter membrane protein 1804406 5604083 Spro_1647 Serratia proteamaculans 568 putrescine ABC transporter membrane protein YP_001477879.1 1803441 D 399741 CDS YP_001477880.1 157369891 5604084 1804403..1805248 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2642 putrescine ABC transporter, permease protein; putrescine ABC transporter membrane protein 1805248 5604084 Spro_1648 Serratia proteamaculans 568 putrescine ABC transporter membrane protein YP_001477880.1 1804403 D 399741 CDS YP_001477881.1 157369892 5604091 1805481..1805924 1 NC_009832.1 KEGG: eca:ECA2673 hypothetical protein; hypothetical protein 1805924 5604091 Spro_1649 Serratia proteamaculans 568 hypothetical protein YP_001477881.1 1805481 D 399741 CDS YP_001477882.1 157369893 5604092 1805993..1807120 1 NC_009832.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1807120 rumB 5604092 rumB Serratia proteamaculans 568 23S rRNA methyluridine methyltransferase YP_001477882.1 1805993 D 399741 CDS YP_001477883.1 157369894 5604093 complement(1807124..1807375) 1 NC_009832.1 KEGG: psb:Psyr_3832 prevent-host-death protein; prevent-host-death protein 1807375 5604093 Spro_1651 Serratia proteamaculans 568 prevent-host-death protein YP_001477883.1 1807124 R 399741 CDS YP_001477884.1 157369895 5604094 complement(1807485..1808219) 1 NC_009832.1 KEGG: ypi:YpsIP31758_2639 arginine ABC transporter, periplasmic substrate-binding protein ArtJ; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 1808219 5604094 Spro_1652 Serratia proteamaculans 568 cationic amino acid ABC transporter periplasmic binding protein YP_001477884.1 1807485 R 399741 CDS YP_001477885.1 157369896 5604095 complement(1808428..1809096) 1 NC_009832.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease ArtM 1809096 artM 5604095 artM Serratia proteamaculans 568 arginine transporter permease ArtM YP_001477885.1 1808428 R 399741 CDS YP_001477886.1 157369897 5604096 complement(1809096..1809836) 1 NC_009832.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease ArtQ 1809836 5604096 Spro_1654 Serratia proteamaculans 568 arginine transporter permease ArtQ YP_001477886.1 1809096 R 399741 CDS YP_001477887.1 157369898 5604097 complement(1809821..1810552) 1 NC_009832.1 KEGG: yen:YE1495 arginine-binding periplasmic protein 1 precursor; TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; cationic amino acid ABC transporter periplasmic binding protein 1810552 5604097 Spro_1655 Serratia proteamaculans 568 cationic amino acid ABC transporter periplasmic binding protein YP_001477887.1 1809821 R 399741 CDS YP_001477888.1 157369899 5604098 complement(1810586..1811314) 1 NC_009832.1 With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 1811314 artP 5604098 artP Serratia proteamaculans 568 arginine transporter ATP-binding subunit YP_001477888.1 1810586 R 399741 CDS YP_001477889.1 157369900 5604099 complement(1811576..1812124) 1 NC_009832.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; putative lipoprotein 1812124 5604099 Spro_1657 Serratia proteamaculans 568 putative lipoprotein YP_001477889.1 1811576 R 399741 CDS YP_001477890.1 157369901 5604106 1812285..1812608 1 NC_009832.1 PFAM: protein of unknown function DUF74; KEGG: eca:ECA2666 hypothetical protein; hypothetical protein 1812608 5604106 Spro_1658 Serratia proteamaculans 568 hypothetical protein YP_001477890.1 1812285 D 399741 CDS YP_001477891.1 157369902 5604107 1812755..1813591 1 NC_009832.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: eca:ECA2665 putative N-acetylmuramoyl-L-alanine amidase; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1813591 5604107 Spro_1659 Serratia proteamaculans 568 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001477891.1 1812755 D 399741 CDS YP_001477892.1 157369903 5604108 complement(1813592..1814602) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: yen:YE1503 hypothetical protein; NAD-dependent epimerase/dehydratase 1814602 5604108 Spro_1660 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001477892.1 1813592 R 399741 CDS YP_001477893.1 157369904 5604115 complement(1814771..1816210) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ypi:YpsIP31758_2621 NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1816210 5604115 Spro_1661 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001477893.1 1814771 R 399741 CDS YP_001477894.1 157369905 5604116 1816364..1816711 1 NC_009832.1 PFAM: protein of unknown function DUF1294; KEGG: stm:STM1632 putative inner membrane protein; hypothetical protein 1816711 5604116 Spro_1662 Serratia proteamaculans 568 hypothetical protein YP_001477894.1 1816364 D 399741 CDS YP_001477895.1 157369906 5604117 complement(1816748..1817764) 1 NC_009832.1 low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; L-threonine aldolase 1817764 5604117 Spro_1663 Serratia proteamaculans 568 L-threonine aldolase YP_001477895.1 1816748 R 399741 CDS YP_001477896.1 157369907 5604133 complement(1817861..1819582) 1 NC_009832.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1819582 5604133 Spro_1664 Serratia proteamaculans 568 pyruvate dehydrogenase YP_001477896.1 1817861 R 399741 CDS YP_001477897.1 157369908 5604134 complement(1819788..1820792) 1 NC_009832.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: eca:ECA2663 NADH oxidoreductase; HCP oxidoreductase 1820792 5604134 Spro_1665 Serratia proteamaculans 568 HCP oxidoreductase YP_001477897.1 1819788 R 399741 CDS YP_001477898.1 157369909 5604135 complement(1820847..1822544) 1 NC_009832.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1822544 5604135 Spro_1666 Serratia proteamaculans 568 hydroxylamine reductase YP_001477898.1 1820847 R 399741 CDS YP_001477899.1 157369910 5604139 complement(1822668..1823564) 1 NC_009832.1 PFAM: protein of unknown function DUF340 membrane; KEGG: yen:YE1511 hypothetical protein; hypothetical protein 1823564 5604139 Spro_1667 Serratia proteamaculans 568 hypothetical protein YP_001477899.1 1822668 R 399741 CDS YP_001477900.1 157369911 5604140 1823757..1825421 1 NC_009832.1 KEGG: ypi:YpsIP31758_2614 hypothetical protein; hypothetical protein 1825421 5604140 Spro_1668 Serratia proteamaculans 568 hypothetical protein YP_001477900.1 1823757 D 399741 CDS YP_001477901.1 157369912 5604141 complement(1825418..1826386) 1 NC_009832.1 PFAM: protein of unknown function DUF535; KEGG: yen:YE1513 putative virulence factor; hypothetical protein 1826386 5604141 Spro_1669 Serratia proteamaculans 568 hypothetical protein YP_001477901.1 1825418 R 399741 CDS YP_001477902.1 157369913 5604172 1826647..1827693 1 NC_009832.1 confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA 1827693 5604172 Spro_1670 Serratia proteamaculans 568 macrolide transporter subunit MacA YP_001477902.1 1826647 D 399741 CDS YP_001477903.1 157369914 5604173 1827693..1829639 1 NC_009832.1 with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease 1829639 5604173 Spro_1671 Serratia proteamaculans 568 macrolide transporter ATP-binding /permease YP_001477903.1 1827693 D 399741 CDS YP_001477904.1 157369915 5604174 complement(1829717..1829938) 1 NC_009832.1 KEGG: stm:STM0943 similar to CspA but not cold shock induced; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1829938 5604174 Spro_1672 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001477904.1 1829717 R 399741 CDS YP_001477905.1 157369916 5604175 1830298..1830618 1 NC_009832.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1830618 clpS 5604175 clpS Serratia proteamaculans 568 ATP-dependent Clp protease adaptor protein ClpS YP_001477905.1 1830298 D 399741 CDS YP_001477906.1 157369917 5604176 1830646..1832925 1 NC_009832.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 1832925 clpA 5604176 clpA Serratia proteamaculans 568 ATP-dependent Clp protease ATP-binding subunit YP_001477906.1 1830646 D 399741 CDS YP_001477907.1 157369918 5604191 complement(1833138..1833356) 1 NC_009832.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1833356 infA 5604191 infA Serratia proteamaculans 568 translation initiation factor IF-1 YP_001477907.1 1833138 R 399741 CDS YP_001477908.1 157369919 5604192 complement(1833463..1834188) 1 NC_009832.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1834188 aat 5604192 aat Serratia proteamaculans 568 leucyl/phenylalanyl-tRNA--protein transferase YP_001477908.1 1833463 R 399741 CDS YP_001477909.1 157369920 5604193 complement(1834219..1835955) 1 NC_009832.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1835955 5604193 Spro_1677 Serratia proteamaculans 568 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001477909.1 1834219 R 399741 CDS YP_001477910.1 157369921 5604197 complement(1835958..1837724) 1 NC_009832.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1837724 5604197 Spro_1678 Serratia proteamaculans 568 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001477910.1 1835958 R 399741 CDS YP_001477911.1 157369922 5604198 complement(1837901..1838518) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: pfo:Pfl_2442 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 1838518 5604198 Spro_1679 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001477911.1 1837901 R 399741 CDS YP_001477912.1 157369923 5604199 complement(1838615..1839496) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4591 transcriptional regulator, LysR family; LysR family transcriptional regulator 1839496 5604199 Spro_1680 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001477912.1 1838615 R 399741 CDS YP_001477913.1 157369924 5604200 complement(1839573..1840544) 1 NC_009832.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: yen:YE1523 thioredoxin reductase; thioredoxin reductase 1840544 5604200 Spro_1681 Serratia proteamaculans 568 thioredoxin reductase YP_001477913.1 1839573 R 399741 CDS YP_001477914.1 157369925 5604201 1841211..1841705 1 NC_009832.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1841705 5604201 Spro_1682 Serratia proteamaculans 568 leucine-responsive transcriptional regulator YP_001477914.1 1841211 D 399741 CDS YP_001477915.1 157369926 5604202 1841826..1845389 1 NC_009832.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: yen:YE1525 putative cell division protein; cell division protein FtsK/SpoIIIE 1845389 5604202 Spro_1683 Serratia proteamaculans 568 cell division protein FtsK/SpoIIIE YP_001477915.1 1841826 D 399741 CDS YP_001477916.1 157369927 5604211 1845588..1846199 1 NC_009832.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1846199 lolA 5604211 lolA Serratia proteamaculans 568 outer-membrane lipoprotein carrier protein YP_001477916.1 1845588 D 399741 CDS YP_001477917.1 157369928 5604212 1846207..1847550 1 NC_009832.1 PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: yen:YE1527 putative ATPase protein; recombination factor protein RarA 1847550 5604212 Spro_1685 Serratia proteamaculans 568 recombination factor protein RarA YP_001477917.1 1846207 D 399741 CDS YP_001477918.1 157369929 5604213 1847661..1848953 1 NC_009832.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1848953 5604213 Spro_1686 Serratia proteamaculans 568 seryl-tRNA synthetase YP_001477918.1 1847661 D 399741 CDS YP_001477919.1 157369930 5604234 1849224..1851677 1 NC_009832.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: kpn:KPN_01580 putative dimethyl sulfoxide reductase, major subunit; anaerobic dimethyl sulfoxide reductase subunit A 1851677 5604234 Spro_1687 Serratia proteamaculans 568 anaerobic dimethyl sulfoxide reductase subunit A YP_001477919.1 1849224 D 399741 CDS YP_001477920.1 157369931 5604235 1851688..1852305 1 NC_009832.1 TIGRFAM: Dimethylsulfoxide reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: kpn:KPN_00927 anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B; dimethylsulfoxide reductase subunit B 1852305 5604235 Spro_1688 Serratia proteamaculans 568 dimethylsulfoxide reductase subunit B YP_001477920.1 1851688 D 399741 CDS YP_001477921.1 157369932 5604236 1852307..1853167 1 NC_009832.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: ypp:YPDSF_3037 anaerobic dimethyl sulfoxide reductase chain C; DMSO reductase anchor subunit DmsC 1853167 5604236 Spro_1689 Serratia proteamaculans 568 DMSO reductase anchor subunit DmsC YP_001477921.1 1852307 D 399741 CDS YP_001477922.1 157369933 5604237 1853217..1853834 1 NC_009832.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD 1853834 5604237 Spro_1690 Serratia proteamaculans 568 twin-argninine leader-binding protein DmsD YP_001477922.1 1853217 D 399741 CDS YP_001477923.1 157369934 5604238 1854132..1854590 1 NC_009832.1 KEGG: plu:plu2183 hypothetical protein; hypothetical protein 1854590 5604238 Spro_1691 Serratia proteamaculans 568 hypothetical protein YP_001477923.1 1854132 D 399741 CDS YP_001477924.1 157369935 5604239 1854602..1855045 1 NC_009832.1 KEGG: plu:plu2184 hypothetical protein; hypothetical protein 1855045 5604239 Spro_1692 Serratia proteamaculans 568 hypothetical protein YP_001477924.1 1854602 D 399741 CDS YP_001477925.1 157369936 5604246 1855035..1856216 1 NC_009832.1 KEGG: plu:plu2185 hypothetical protein; hypothetical protein 1856216 5604246 Spro_1693 Serratia proteamaculans 568 hypothetical protein YP_001477925.1 1855035 D 399741 CDS YP_001477926.1 157369937 5604247 1856229..1856645 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0736 hypothetical protein; NUDIX hydrolase 1856645 5604247 Spro_1694 Serratia proteamaculans 568 NUDIX hydrolase YP_001477926.1 1856229 D 399741 CDS YP_001477927.1 157369938 5604248 1856773..1857423 1 NC_009832.1 PFAM: phosphoribosyltransferase; KEGG: plu:plu2180 hypothetical protein; phosphoribosyltransferase 1857423 5604248 Spro_1695 Serratia proteamaculans 568 phosphoribosyltransferase YP_001477927.1 1856773 D 399741 CDS YP_001477928.1 157369939 5604249 1857457..1857672 1 NC_009832.1 KEGG: plu:plu2181 hypothetical protein; hypothetical protein 1857672 5604249 Spro_1696 Serratia proteamaculans 568 hypothetical protein YP_001477928.1 1857457 D 399741 CDS YP_001477929.1 157369940 5604250 1857693..1858388 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: plu:plu2182 hypothetical protein; HAD family hydrolase 1858388 5604250 Spro_1697 Serratia proteamaculans 568 HAD family hydrolase YP_001477929.1 1857693 D 399741 CDS YP_001477930.1 157369941 5604286 1858771..1862607 1 NC_009832.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: plu:plu2186 hypothetical protein; amino acid adenylation domain-containing protein 1862607 5604286 Spro_1698 Serratia proteamaculans 568 amino acid adenylation domain-containing protein YP_001477930.1 1858771 D 399741 CDS YP_001477931.1 157369942 5604287 1862604..1863530 1 NC_009832.1 PFAM: Indigoidine synthase A family protein; KEGG: plu:plu2187 hypothetical protein; indigoidine synthase A family protein 1863530 5604287 Spro_1699 Serratia proteamaculans 568 indigoidine synthase A family protein YP_001477931.1 1862604 D 399741 CDS YP_001477932.1 157369943 5604288 1863745..1864890 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1530 hypothetical protein; putative MFS family transporter protein 1864890 5604288 Spro_1700 Serratia proteamaculans 568 putative MFS family transporter protein YP_001477932.1 1863745 D 399741 CDS YP_001477933.1 157369944 5604295 complement(1864941..1865681) 1 NC_009832.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 1865681 pflA 5604295 pflA Serratia proteamaculans 568 pyruvate formate lyase-activating enzyme 1 YP_001477933.1 1864941 R 399741 CDS YP_001477934.1 157369945 5604296 complement(1865982..1868264) 1 NC_009832.1 KEGG: yen:YE1532 formate acetyltransferase 1; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; formate acetyltransferase 1868264 5604296 Spro_1702 Serratia proteamaculans 568 formate acetyltransferase YP_001477934.1 1865982 R 399741 CDS YP_001477935.1 157369946 5604297 complement(1868319..1869179) 1 NC_009832.1 PFAM: formate/nitrite transporter; KEGG: yen:YE1533 putative formate transporter 1; formate transporter 1869179 5604297 Spro_1703 Serratia proteamaculans 568 formate transporter YP_001477935.1 1868319 R 399741 CDS YP_001477936.1 157369947 5604396 complement(1869642..1871405) 1 NC_009832.1 PFAM: protein of unknown function DUF181; KEGG: ypi:YpsIP31758_2587 hypothetical protein; hypothetical protein 1871405 5604396 Spro_1704 Serratia proteamaculans 568 hypothetical protein YP_001477936.1 1869642 R 399741 CDS YP_001477937.1 157369948 5604397 1871554..1872600 1 NC_009832.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II 1872600 ansB 5604397 ansB Serratia proteamaculans 568 L-asparaginase II YP_001477937.1 1871554 D 399741 CDS YP_001477938.1 157369949 5604398 1872883..1873968 1 NC_009832.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1873968 5604398 Spro_1706 Serratia proteamaculans 568 phosphoserine aminotransferase YP_001477938.1 1872883 D 399741 CDS YP_001477939.1 157369950 5604413 1874084..1875370 1 NC_009832.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1875370 5604413 Spro_1707 Serratia proteamaculans 568 3-phosphoshikimate 1-carboxyvinyltransferase YP_001477939.1 1874084 D 399741 CDS YP_001477940.1 157369951 5604414 1875647..1876336 1 NC_009832.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1876336 cmk 5604414 cmk Serratia proteamaculans 568 cytidylate kinase YP_001477940.1 1875647 D 399741 CDS YP_001477941.1 157369952 5604415 1876518..1878197 1 NC_009832.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1878197 rpsA 5604415 rpsA Serratia proteamaculans 568 30S ribosomal protein S1 YP_001477941.1 1876518 D 399741 CDS YP_001477942.1 157369953 5604416 1878260..1878544 1 NC_009832.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 1878544 ihfB 5604416 ihfB Serratia proteamaculans 568 integration host factor subunit beta YP_001477942.1 1878260 D 399741 CDS YP_001477943.1 157369954 5604417 1878876..1881089 1 NC_009832.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: yen:YE1542 hypothetical protein; hypothetical protein 1881089 5604417 Spro_1711 Serratia proteamaculans 568 hypothetical protein YP_001477943.1 1878876 D 399741 CDS YP_001477944.1 157369955 5604418 1881125..1882873 1 NC_009832.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease 1882873 5604418 Spro_1712 Serratia proteamaculans 568 lipid transporter ATP-binding/permease YP_001477944.1 1881125 D 399741 CDS YP_001477945.1 157369956 5604430 1882873..1883853 1 NC_009832.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1883853 lpxK 5604430 lpxK Serratia proteamaculans 568 tetraacyldisaccharide 4'-kinase YP_001477945.1 1882873 D 399741 CDS YP_001477946.1 157369957 5604431 complement(1883855..1885261) 1 NC_009832.1 PFAM: protein of unknown function DUF1338; KEGG: pen:PSEEN5405 hypothetical protein; hypothetical protein 1885261 5604431 Spro_1714 Serratia proteamaculans 568 hypothetical protein YP_001477946.1 1883855 R 399741 CDS YP_001477947.1 157369958 5604432 1885787..1885996 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yen:YE1546 putative cold shock protein CspE2; cold-shock DNA-binding domain-containing protein 1885996 5604432 Spro_1715 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001477947.1 1885787 D 399741 CDS YP_001477948.1 157369959 5604466 1886218..1886439 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ypi:YpsIP31758_2574 cold shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1886439 5604466 Spro_1716 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001477948.1 1886218 D 399741 CDS YP_001477949.1 157369960 5604467 1886550..1887776 1 NC_009832.1 PFAM: protein of unknown function DUF1006; KEGG: cvi:CV_0245 hypothetical protein; hypothetical protein 1887776 5604467 Spro_1717 Serratia proteamaculans 568 hypothetical protein YP_001477949.1 1886550 D 399741 CDS YP_001477950.1 157369961 5604468 1888065..1888247 1 NC_009832.1 PFAM: protein of unknown function DUF343; KEGG: ypi:YpsIP31758_2572 hypothetical protein; hypothetical protein 1888247 5604468 Spro_1718 Serratia proteamaculans 568 hypothetical protein YP_001477950.1 1888065 D 399741 CDS YP_001477951.1 157369962 5604487 1888244..1888993 1 NC_009832.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1888993 5604487 Spro_1719 Serratia proteamaculans 568 3-deoxy-manno-octulosonate cytidylyltransferase YP_001477951.1 1888244 D 399741 CDS YP_001477952.1 157369963 5604488 1889142..1890038 1 NC_009832.1 KEGG: yen:YE1551 hypothetical protein; hypothetical protein 1890038 5604488 Spro_1720 Serratia proteamaculans 568 hypothetical protein YP_001477952.1 1889142 D 399741 CDS YP_001477953.1 157369964 5604489 complement(1890045..1890818) 1 NC_009832.1 PFAM: protein of unknown function DUF218; KEGG: yen:YE1552 putative inner membrane protein; hypothetical protein 1890818 5604489 Spro_1721 Serratia proteamaculans 568 hypothetical protein YP_001477953.1 1890045 R 399741 CDS YP_001477954.1 157369965 5604490 1890970..1891755 1 NC_009832.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; putative metallothionein SmtA 1891755 5604490 Spro_1722 Serratia proteamaculans 568 putative metallothionein SmtA YP_001477954.1 1890970 D 399741 CDS YP_001477955.1 157369966 5604491 1891752..1893074 1 NC_009832.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1893074 5604491 Spro_1723 Serratia proteamaculans 568 condesin subunit F YP_001477955.1 1891752 D 399741 CDS YP_001477956.1 157369967 5604501 1893055..1893783 1 NC_009832.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1893783 5604501 Spro_1724 Serratia proteamaculans 568 condesin subunit E YP_001477956.1 1893055 D 399741 CDS YP_001477957.1 157369968 5604502 1893780..1898228 1 NC_009832.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1898228 mukB 5604502 mukB Serratia proteamaculans 568 cell division protein MukB YP_001477957.1 1893780 D 399741 CDS YP_001477958.1 157369969 5604503 1898453..1900294 1 NC_009832.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: yen:YE1557 hypothetical protein; hypothetical protein 1900294 5604503 Spro_1726 Serratia proteamaculans 568 hypothetical protein YP_001477958.1 1898453 D 399741 CDS YP_001477959.1 157369970 5604507 1900476..1901024 1 NC_009832.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: yen:YE1558 hypothetical protein; hypothetical protein 1901024 5604507 Spro_1727 Serratia proteamaculans 568 hypothetical protein YP_001477959.1 1900476 D 399741 CDS YP_001477960.1 157369971 5604508 1901091..1901738 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2561 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 1901738 5604508 Spro_1728 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001477960.1 1901091 D 399741 CDS YP_001477961.1 157369972 5604509 complement(1901807..1903012) 1 NC_009832.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1903012 5604509 Spro_1729 Serratia proteamaculans 568 aromatic amino acid aminotransferase YP_001477961.1 1901807 R 399741 CDS YP_001477962.1 157369973 5604584 complement(1903242..1904351) 1 NC_009832.1 PFAM: porin Gram-negative type; KEGG: stm:STM1473 outer membrane protein N precursor; porin 1904351 5604584 Spro_1730 Serratia proteamaculans 568 porin YP_001477962.1 1903242 R 399741 CDS YP_001477963.1 157369974 5604585 complement(1904655..1906055) 1 NC_009832.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1906055 asnC 5604585 asnC Serratia proteamaculans 568 asparaginyl-tRNA synthetase YP_001477963.1 1904655 R 399741 CDS YP_001477964.1 157369975 5604586 complement(1906280..1907485) 1 NC_009832.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1907485 5604586 Spro_1732 Serratia proteamaculans 568 nicotinate phosphoribosyltransferase YP_001477964.1 1906280 R 399741 CDS YP_001477965.1 157369976 5604625 complement(1907740..1909446) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sun:SUN_1205 signal transduction response regulator; diguanylate cyclase 1909446 5604625 Spro_1733 Serratia proteamaculans 568 diguanylate cyclase YP_001477965.1 1907740 R 399741 CDS YP_001477966.1 157369977 5604626 1909895..1912510 1 NC_009832.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: yps:YPTB1438 putative aminopeptidase N; aminopeptidase N 1912510 pepN 5604626 pepN Serratia proteamaculans 568 aminopeptidase N YP_001477966.1 1909895 D 399741 CDS YP_001477967.1 157369978 5604627 complement(1912542..1913315) 1 NC_009832.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transport ATP-binding subunit 1913315 ssuB 5604627 ssuB Serratia proteamaculans 568 aliphatic sulfonates transport ATP-binding subunit YP_001477967.1 1912542 R 399741 CDS YP_001477968.1 157369979 5604711 complement(1913312..1914106) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_0355 putative ABC aliphatic sulfonates transporter, permease subunit; binding-protein-dependent transport systems inner membrane component 1914106 5604711 Spro_1736 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001477968.1 1913312 R 399741 CDS YP_001477969.1 157369980 5604712 complement(1914118..1915266) 1 NC_009832.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1915266 5604712 Spro_1737 Serratia proteamaculans 568 alkanesulfonate monooxygenase YP_001477969.1 1914118 R 399741 CDS YP_001477970.1 157369981 5604713 complement(1915283..1916248) 1 NC_009832.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit 1916248 5604713 Spro_1738 Serratia proteamaculans 568 alkanesulfonate transporter substrate-binding subunit YP_001477970.1 1915283 R 399741 CDS YP_001477971.1 157369982 5604738 complement(1916274..1916789) 1 NC_009832.1 PFAM: NADPH-dependent FMN reductase; KEGG: ypi:YpsIP31758_0352 NADPH-dependent FMN reductase; NAD(P)H-dependent FMN reductase 1916789 5604738 Spro_1739 Serratia proteamaculans 568 NAD(P)H-dependent FMN reductase YP_001477971.1 1916274 R 399741 CDS YP_001477972.1 157369983 5604739 1917112..1918122 1 NC_009832.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1918122 5604739 Spro_1740 Serratia proteamaculans 568 dihydroorotate dehydrogenase 2 YP_001477972.1 1917112 D 399741 CDS YP_001477973.1 157369984 5604740 1918298..1918846 1 NC_009832.1 PFAM: protein of unknown function DUF1379; KEGG: yen:YE1569 hypothetical protein; hypothetical protein 1918846 5604740 Spro_1741 Serratia proteamaculans 568 hypothetical protein YP_001477973.1 1918298 D 399741 CDS YP_001477974.1 157369985 5604781 complement(1918853..1919956) 1 NC_009832.1 PFAM: ferredoxin; MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: yen:YE1570 putative iron-sulfur binding protein; MOSC domain-containing protein 1919956 5604781 Spro_1742 Serratia proteamaculans 568 MOSC domain-containing protein YP_001477974.1 1918853 R 399741 CDS YP_001477975.1 157369986 5604782 1920060..1922180 1 NC_009832.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1922180 rlmL 5604782 rlmL Serratia proteamaculans 568 23S rRNA m(2)G2445 methyltransferase YP_001477975.1 1920060 D 399741 CDS YP_001477976.1 157369987 5604783 1922186..1924090 1 NC_009832.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1924090 5604783 Spro_1744 Serratia proteamaculans 568 ABC transporter ATPase YP_001477976.1 1922186 D 399741 CDS YP_001477977.1 157369988 5604813 1924237..1925481 1 NC_009832.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: yen:YE1573 putative paraquat-inducible protein A; PqiA family integral membrane protein 1925481 5604813 Spro_1745 Serratia proteamaculans 568 PqiA family integral membrane protein YP_001477977.1 1924237 D 399741 CDS YP_001477978.1 157369989 5604814 1925468..1927114 1 NC_009832.1 PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA2532 paraquat-inducible protein B; paraquat-inducible protein B 1927114 5604814 Spro_1746 Serratia proteamaculans 568 paraquat-inducible protein B YP_001477978.1 1925468 D 399741 CDS YP_001477979.1 157369990 5604815 1927111..1927668 1 NC_009832.1 PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 1927668 5604815 Spro_1747 Serratia proteamaculans 568 hypothetical protein YP_001477979.1 1927111 D 399741 CDS YP_001477980.1 157369991 5604869 1927940..1928110 1 NC_009832.1 PFAM: ribosome modulation factor; KEGG: stm:STM1066 ribosome modulation factor (involved in dimerization of 70S ribosomes); ribosome modulation factor 1928110 5604869 Spro_1748 Serratia proteamaculans 568 ribosome modulation factor YP_001477980.1 1927940 D 399741 CDS YP_001477981.1 157369992 5604870 complement(1928175..1929449) 1 NC_009832.1 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 1929449 5604870 Spro_1749 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase II YP_001477981.1 1928175 R 399741 CDS YP_001477982.1 157369993 5604874 complement(1929446..1929973) 1 NC_009832.1 PFAM: helix-turn-helix HxlR type; KEGG: yen:YE1577 hypothetical protein; HxlR family transcriptional regulator 1929973 5604874 Spro_1750 Serratia proteamaculans 568 HxlR family transcriptional regulator YP_001477982.1 1929446 R 399741 CDS YP_001477983.1 157369994 5604875 complement(1930090..1930608) 1 NC_009832.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1930608 5604875 Spro_1751 Serratia proteamaculans 568 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YP_001477983.1 1930090 R 399741 CDS YP_001477984.1 157369995 5604876 complement(1930677..1932449) 1 NC_009832.1 KEGG: yen:YE1579 putative Lon protease; putative Lon protease 1932449 5604876 Spro_1752 Serratia proteamaculans 568 putative Lon protease YP_001477984.1 1930677 R 399741 CDS YP_001477985.1 157369996 5604892 1932638..1933096 1 NC_009832.1 PFAM: protein of unknown function DUF1047; KEGG: yen:YE1580 hypothetical protein; hypothetical protein 1933096 5604892 Spro_1753 Serratia proteamaculans 568 hypothetical protein YP_001477985.1 1932638 D 399741 CDS YP_001477986.1 157369997 5604893 complement(1933209..1934285) 1 NC_009832.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A 1934285 5604893 Spro_1754 Serratia proteamaculans 568 outer membrane protein A YP_001477986.1 1933209 R 399741 CDS YP_001477987.1 157369998 5604894 complement(1934644..1935150) 1 NC_009832.1 PFAM: cell division inhibitor SulA; KEGG: yen:YE1582 putative cell division inhibitor; SOS cell division inhibitor 1935150 5604894 Spro_1755 Serratia proteamaculans 568 SOS cell division inhibitor YP_001477987.1 1934644 R 399741 CDS YP_001477988.1 157369999 5604921 1935383..1936042 1 NC_009832.1 PFAM: TfoX domain protein; KEGG: yen:YE1583 hypothetical protein; regulator of competence-specific genes 1936042 5604921 Spro_1756 Serratia proteamaculans 568 regulator of competence-specific genes YP_001477988.1 1935383 D 399741 CDS YP_001477989.1 157370000 5604922 complement(1936043..1938178) 1 NC_009832.1 TIGRFAM: hypothetical membrane protein; integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: yen:YE1584 hypothetical protein; hypothetical protein 1938178 5604922 Spro_1757 Serratia proteamaculans 568 hypothetical protein YP_001477989.1 1936043 R 399741 CDS YP_001477990.1 157370001 5604923 complement(1938205..1938666) 1 NC_009832.1 PFAM: protein of unknown function DUF307; KEGG: yen:YE1585 hypothetical protein; hypothetical protein 1938666 5604923 Spro_1758 Serratia proteamaculans 568 hypothetical protein YP_001477990.1 1938205 R 399741 CDS YP_001477991.1 157370002 5604930 1938823..1940877 1 NC_009832.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1940877 helD 5604930 helD Serratia proteamaculans 568 DNA helicase IV YP_001477991.1 1938823 D 399741 CDS YP_001477992.1 157370003 5604931 complement(1940911..1941369) 1 NC_009832.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1941369 mgsA 5604931 mgsA Serratia proteamaculans 568 methylglyoxal synthase YP_001477992.1 1940911 R 399741 CDS YP_001477993.1 157370004 5604932 complement(1941495..1942166) 1 NC_009832.1 KEGG: yen:YE1588 hypothetical protein; hypothetical protein 1942166 5604932 Spro_1761 Serratia proteamaculans 568 hypothetical protein YP_001477993.1 1941495 R 399741 CDS YP_001477994.1 157370005 5604933 1942428..1942841 1 NC_009832.1 PFAM: CoA-binding domain protein; KEGG: yen:YE1589 hypothetical protein; CoA-binding domain-containing protein 1942841 5604933 Spro_1762 Serratia proteamaculans 568 CoA-binding domain-containing protein YP_001477994.1 1942428 D 399741 CDS YP_001477995.1 157370006 5604934 complement(1942898..1943215) 1 NC_009832.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: ent:Ent638_1478 hemimethylated DNA binding protein; heat shock protein HspQ 1943215 5604934 Spro_1763 Serratia proteamaculans 568 heat shock protein HspQ YP_001477995.1 1942898 R 399741 CDS YP_001477996.1 157370007 5604935 complement(1943277..1944467) 1 NC_009832.1 SMART: PUA domain containing protein; KEGG: yps:YPTB1463 hypothetical protein; PUA domain-containing protein 1944467 5604935 Spro_1764 Serratia proteamaculans 568 PUA domain-containing protein YP_001477996.1 1943277 R 399741 CDS YP_001477997.1 157370008 5604952 1944560..1944838 1 NC_009832.1 PFAM: acylphosphatase; KEGG: yen:YE1596 putative acylphosphatase; acylphosphatase 1944838 5604952 Spro_1765 Serratia proteamaculans 568 acylphosphatase YP_001477997.1 1944560 D 399741 CDS YP_001477998.1 157370009 5604953 complement(1944843..1945172) 1 NC_009832.1 PFAM: DsrC family protein; KEGG: ypi:YpsIP31758_2529 sulfurtransferase TusE; DsrC family protein 1945172 5604953 Spro_1766 Serratia proteamaculans 568 DsrC family protein YP_001477998.1 1944843 R 399741 CDS YP_001477999.1 157370010 5604954 complement(1945284..1945943) 1 NC_009832.1 PFAM: protein of unknown function UPF0005; KEGG: eca:ECA1763 putative membrane protein; hypothetical protein 1945943 5604954 Spro_1767 Serratia proteamaculans 568 hypothetical protein YP_001477999.1 1945284 R 399741 CDS YP_001478000.1 157370011 5606351 complement(1946401..1947234) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0746 hypothetical protein; hypothetical protein 1947234 5606351 Spro_1768 Serratia proteamaculans 568 hypothetical protein YP_001478000.1 1946401 R 399741 CDS YP_001478001.1 157370012 5604959 complement(1947338..1947667) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0749 hypothetical protein; hypothetical protein 1947667 5604959 Spro_1769 Serratia proteamaculans 568 hypothetical protein YP_001478001.1 1947338 R 399741 CDS YP_001478002.1 157370013 5604960 complement(1947664..1948032) 1 NC_009832.1 PFAM: protein of unknown function DUF1219; KEGG: yps:YPTB3866 hypothetical protein; hypothetical protein 1948032 5604960 Spro_1770 Serratia proteamaculans 568 hypothetical protein YP_001478002.1 1947664 R 399741 CDS YP_001478003.1 157370014 5604961 complement(1948094..1948429) 1 NC_009832.1 PFAM: YagBYeeUYfjZ family protein; KEGG: yps:YPTB3867 hypothetical protein; hypothetical protein 1948429 5604961 Spro_1771 Serratia proteamaculans 568 hypothetical protein YP_001478003.1 1948094 R 399741 CDS YP_001478004.1 157370015 5604962 complement(1948441..1948923) 1 NC_009832.1 PFAM: DNA repair protein RadC; KEGG: yps:YPTB3868 hypothetical protein; DNA repair protein RadC 1948923 5604962 Spro_1772 Serratia proteamaculans 568 DNA repair protein RadC YP_001478004.1 1948441 R 399741 CDS YP_001478005.1 157370016 5604963 complement(1948956..1949414) 1 NC_009832.1 PFAM: Antirestriction protein; KEGG: ypi:YpsIP31758_0752 antirestriction protein, ArdB family; antirestriction protein 1949414 5604963 Spro_1773 Serratia proteamaculans 568 antirestriction protein YP_001478005.1 1948956 R 399741 CDS YP_001478006.1 157370017 5604964 complement(1949597..1950853) 1 NC_009832.1 PFAM: O-antigen polymerase; KEGG: yen:YE1727 putative inner membrane protein; O-antigen polymerase 1950853 5604964 Spro_1774 Serratia proteamaculans 568 O-antigen polymerase YP_001478006.1 1949597 R 399741 CDS YP_001478007.1 157370018 5604965 complement(1950906..1952075) 1 NC_009832.1 TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase family 9; KEGG: ypp:YPDSF_3215 lipopolysaccharide core biosynthesis protein; lipopolysaccharide heptosyltransferase III 1952075 5604965 Spro_1775 Serratia proteamaculans 568 lipopolysaccharide heptosyltransferase III YP_001478007.1 1950906 R 399741 CDS YP_001478008.1 157370019 5604994 complement(1952678..1953154) 1 NC_009832.1 KEGG: aha:AHA_1082 hypothetical protein; hypothetical protein 1953154 5604994 Spro_1776 Serratia proteamaculans 568 hypothetical protein YP_001478008.1 1952678 R 399741 CDS YP_001478009.1 157370020 5604995 complement(1953167..1953451) 1 NC_009832.1 hypothetical protein 1953451 5604995 Spro_1777 Serratia proteamaculans 568 hypothetical protein YP_001478009.1 1953167 R 399741 CDS YP_001478010.1 157370021 5604996 complement(1953465..1953722) 1 NC_009832.1 hypothetical protein 1953722 5604996 Spro_1778 Serratia proteamaculans 568 hypothetical protein YP_001478010.1 1953465 R 399741 CDS YP_001478011.1 157370022 5605032 complement(1954180..1954581) 1 NC_009832.1 hypothetical protein 1954581 5605032 Spro_1779 Serratia proteamaculans 568 hypothetical protein YP_001478011.1 1954180 R 399741 CDS YP_001478012.1 157370023 5605033 1954913..1956346 1 NC_009832.1 KEGG: ecc:c3652 hypothetical protein YfjI; hypothetical protein 1956346 5605033 Spro_1780 Serratia proteamaculans 568 hypothetical protein YP_001478012.1 1954913 D 399741 CDS YP_001478013.1 157370024 5605034 1956779..1957375 1 NC_009832.1 KEGG: ecc:c3648 hypothetical protein; hypothetical protein 1957375 5605034 Spro_1781 Serratia proteamaculans 568 hypothetical protein YP_001478013.1 1956779 D 399741 CDS YP_001478014.1 157370025 5606270 1958949..1959446 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ent:Ent638_2916 uncharacterised conserved protein UCP028301; hypothetical protein 1959446 5606270 Spro_1783 Serratia proteamaculans 568 hypothetical protein YP_001478014.1 1958949 D 399741 CDS YP_001478015.1 157370026 5605060 1959481..1961028 1 NC_009832.1 PFAM: protein of unknown function DUF877; KEGG: ent:Ent638_2915 protein of unknown function DUF877; hypothetical protein 1961028 5605060 Spro_1784 Serratia proteamaculans 568 hypothetical protein YP_001478015.1 1959481 D 399741 CDS YP_001478016.1 157370027 5605061 1961045..1962385 1 NC_009832.1 PFAM: protein of unknown function DUF876; KEGG: kpn:KPN_01324 hypothetical protein; hypothetical protein 1962385 5605061 Spro_1785 Serratia proteamaculans 568 hypothetical protein YP_001478016.1 1961045 D 399741 CDS YP_001478017.1 157370028 5605078 1962382..1963071 1 NC_009832.1 KEGG: kpn:KPN_01325 hypothetical protein; hypothetical protein 1963071 5605078 Spro_1786 Serratia proteamaculans 568 hypothetical protein YP_001478017.1 1962382 D 399741 CDS YP_001478018.1 157370029 5605079 1963068..1964777 1 NC_009832.1 PFAM: OmpA/MotB domain protein; KEGG: kpn:KPN_01326 putative outer membrane protein; OmpA/MotB domain-containing protein 1964777 5605079 Spro_1787 Serratia proteamaculans 568 OmpA/MotB domain-containing protein YP_001478018.1 1963068 D 399741 CDS YP_001478019.1 157370030 5605080 1964781..1965272 1 NC_009832.1 PFAM: protein of unknown function DUF796; KEGG: kpn:KPN_01327 hypothetical protein; hypothetical protein 1965272 5605080 Spro_1788 Serratia proteamaculans 568 hypothetical protein YP_001478019.1 1964781 D 399741 CDS YP_001478020.1 157370031 5605118 1965445..1968099 1 NC_009832.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: kpn:KPN_01328 putative protease; ATPase 1968099 5605118 Spro_1789 Serratia proteamaculans 568 ATPase YP_001478020.1 1965445 D 399741 CDS YP_001478021.1 157370032 5605119 1968619..1970997 1 NC_009832.1 PFAM: Rhs element Vgr protein; KEGG: kpn:KPN_01329 hypothetical protein; Rhs element Vgr protein 1970997 5605119 Spro_1790 Serratia proteamaculans 568 Rhs element Vgr protein YP_001478021.1 1968619 D 399741 CDS YP_001478022.1 157370033 5605120 1971004..1971783 1 NC_009832.1 KEGG: plu:plu3245 hypothetical protein; hypothetical protein 1971783 5605120 Spro_1791 Serratia proteamaculans 568 hypothetical protein YP_001478022.1 1971004 D 399741 CDS YP_001478023.1 157370034 5605136 1971895..1972428 1 NC_009832.1 KEGG: plu:plu3242 hypothetical protein; hypothetical protein 1972428 5605136 Spro_1792 Serratia proteamaculans 568 hypothetical protein YP_001478023.1 1971895 D 399741 CDS YP_001478024.1 157370035 5605137 1972537..1973070 1 NC_009832.1 KEGG: plu:plu3242 hypothetical protein; hypothetical protein 1973070 5605137 Spro_1793 Serratia proteamaculans 568 hypothetical protein YP_001478024.1 1972537 D 399741 CDS YP_001478025.1 157370036 5605138 1973179..1973691 1 NC_009832.1 KEGG: plu:plu3243 hypothetical protein; hypothetical protein 1973691 5605138 Spro_1794 Serratia proteamaculans 568 hypothetical protein YP_001478025.1 1973179 D 399741 CDS YP_001478026.1 157370037 5605166 1973679..1976126 1 NC_009832.1 KEGG: plu:plu3241 hypothetical protein; hypothetical protein 1976126 5605166 Spro_1795 Serratia proteamaculans 568 hypothetical protein YP_001478026.1 1973679 D 399741 CDS YP_001478027.1 157370038 5605167 1976145..1976402 1 NC_009832.1 PFAM: PAAR repeat-containing protein; KEGG: plu:plu3240 hypothetical protein; PAAR repeat-containing protein 1976402 5605167 Spro_1796 Serratia proteamaculans 568 PAAR repeat-containing protein YP_001478027.1 1976145 D 399741 CDS YP_001478028.1 157370039 5605168 1976576..1977538 1 NC_009832.1 KEGG: plu:plu3239 hypothetical protein; hypothetical protein 1977538 5605168 Spro_1797 Serratia proteamaculans 568 hypothetical protein YP_001478028.1 1976576 D 399741 CDS YP_001478029.1 157370040 5605193 1977765..1980968 1 NC_009832.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: kpn:KPN_01342 hypothetical protein; ImcF domain-containing protein 1980968 5605193 Spro_1798 Serratia proteamaculans 568 ImcF domain-containing protein YP_001478029.1 1977765 D 399741 CDS YP_001478030.1 157370041 5605194 1980968..1982560 1 NC_009832.1 PFAM: ImpA domain protein; KEGG: ypi:YpsIP31758_2492 ImpA domain protein; ImpA domain-containing protein 1982560 5605194 Spro_1799 Serratia proteamaculans 568 ImpA domain-containing protein YP_001478030.1 1980968 D 399741 CDS YP_001478031.1 157370042 5605195 1982588..1984342 1 NC_009832.1 PFAM: protein of unknown function DUF879; KEGG: kpn:KPN_01347 hypothetical protein; hypothetical protein 1984342 5605195 Spro_1800 Serratia proteamaculans 568 hypothetical protein YP_001478031.1 1982588 D 399741 CDS YP_001478032.1 157370043 5605205 1984306..1985391 1 NC_009832.1 PFAM: protein of unknown function DUF1305; KEGG: ypi:YpsIP31758_0801 hypothetical protein; hypothetical protein 1985391 5605205 Spro_1801 Serratia proteamaculans 568 hypothetical protein YP_001478032.1 1984306 D 399741 CDS YP_001478033.1 157370044 5605206 1985369..1985914 1 NC_009832.1 KEGG: ypi:YpsIP31758_2487 hypothetical protein; hypothetical protein 1985914 5605206 Spro_1802 Serratia proteamaculans 568 hypothetical protein YP_001478033.1 1985369 D 399741 CDS YP_001478034.1 157370045 5605210 1985914..1986363 1 NC_009832.1 PFAM: GPW/gp25 family protein; KEGG: ypi:YpsIP31758_2486 hypothetical protein; GPW/gp25 family protein 1986363 5605210 Spro_1803 Serratia proteamaculans 568 GPW/gp25 family protein YP_001478034.1 1985914 D 399741 CDS YP_001478035.1 157370046 5605211 1986614..1988005 1 NC_009832.1 PFAM: ImpA domain protein; KEGG: ent:Ent638_2906 ImpA domain protein; ImpA domain-containing protein 1988005 5605211 Spro_1804 Serratia proteamaculans 568 ImpA domain-containing protein YP_001478035.1 1986614 D 399741 CDS YP_001478036.1 157370047 5605212 complement(1988172..1990166) 1 NC_009832.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: kpn:KPN_pKPN3p05958 secondary glycine betaine transporter BetU; choline/carnitine/betaine transporter 1990166 5605212 Spro_1805 Serratia proteamaculans 568 choline/carnitine/betaine transporter YP_001478036.1 1988172 R 399741 CDS YP_001478037.1 157370048 5605241 1990629..1990844 1 NC_009832.1 hypothetical protein 1990844 5605241 Spro_1806 Serratia proteamaculans 568 hypothetical protein YP_001478037.1 1990629 D 399741 CDS YP_001478038.1 157370049 5605242 complement(1990952..1992361) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: yen:YE1369 putative dehydrogenase, cytochrome c subunit; gluconate 2-dehydrogenase 1992361 5605242 Spro_1807 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478038.1 1990952 R 399741 CDS YP_001478039.1 157370050 5605243 complement(1992358..1994013) 1 NC_009832.1 KEGG: yen:YE1370 putative dehydrogenase subunit; putative dehydrogenase subunit 1994013 5605243 Spro_1808 Serratia proteamaculans 568 putative dehydrogenase subunit YP_001478039.1 1992358 R 399741 CDS YP_001478040.1 157370051 5605273 complement(1994029..1994589) 1 NC_009832.1 KEGG: yen:YE1370A putative dehydrogenase subunit; putative dehydrogenase subunit 1994589 5605273 Spro_1809 Serratia proteamaculans 568 putative dehydrogenase subunit YP_001478040.1 1994029 R 399741 CDS YP_001478041.1 157370052 5605274 complement(1994822..1995619) 1 NC_009832.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: ypi:YpsIP31758_B0090 putative endonuclease; nuclease 1995619 5605274 Spro_1810 Serratia proteamaculans 568 nuclease YP_001478041.1 1994822 R 399741 CDS YP_001478042.1 157370053 5605275 complement(1995785..1997245) 1 NC_009832.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: ecv:APECO1_516 Rac prophage; potassium transporter subunit; TrkH family potassium uptake protein 1997245 5605275 Spro_1811 Serratia proteamaculans 568 TrkH family potassium uptake protein YP_001478042.1 1995785 R 399741 CDS YP_001478043.1 157370054 5605313 complement(1997383..1997772) 1 NC_009832.1 hypothetical protein 1997772 5605313 Spro_1812 Serratia proteamaculans 568 hypothetical protein YP_001478043.1 1997383 R 399741 CDS YP_001478044.1 157370055 5605314 complement(1997934..1998533) 1 NC_009832.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1998533 5605314 Spro_1813 Serratia proteamaculans 568 TrpR binding protein WrbA YP_001478044.1 1997934 R 399741 CDS YP_001478045.1 157370056 5605315 complement(1998612..1999229) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aha:AHA_3853 transporter, LysE family; lysine exporter protein LysE/YggA 1999229 5605315 Spro_1814 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001478045.1 1998612 R 399741 CDS YP_001478046.1 157370057 5605360 1999297..2000220 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_4583 CDA peptide synthetase I; LysR family transcriptional regulator 2000220 5605360 Spro_1815 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478046.1 1999297 D 399741 CDS YP_001478047.1 157370058 5605361 complement(2000217..2000792) 1 NC_009832.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: ppf:Pput_3508 transcriptional regulator, XRE family; XRE family transcriptional regulator 2000792 5605361 Spro_1816 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001478047.1 2000217 R 399741 CDS YP_001478048.1 157370059 5605362 2000860..2001777 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pst:PSPTO_3470 hypothetical protein; hypothetical protein 2001777 5605362 Spro_1817 Serratia proteamaculans 568 hypothetical protein YP_001478048.1 2000860 D 399741 CDS YP_001478049.1 157370060 5605392 complement(2001806..2003125) 1 NC_009832.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: yen:YE1944 putative membrane permease; uracil-xanthine permease 2003125 5605392 Spro_1818 Serratia proteamaculans 568 uracil-xanthine permease YP_001478049.1 2001806 R 399741 CDS YP_001478050.1 157370061 5605393 complement(2003182..2003709) 1 NC_009832.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: yen:YE1945 4-hydroxyphenylacetate 3-monooxygenase coupling protein; flavin reductase domain-containing protein 2003709 5605393 Spro_1819 Serratia proteamaculans 568 flavin reductase domain-containing protein YP_001478050.1 2003182 R 399741 CDS YP_001478051.1 157370062 5605394 complement(2003724..2004527) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: yen:YE1947 putative hydrolase; alpha/beta hydrolase fold domain-containing protein 2004527 5605394 Spro_1820 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001478051.1 2003724 R 399741 CDS YP_001478052.1 157370063 5605418 complement(2004552..2004938) 1 NC_009832.1 PFAM: Endoribonuclease L-PSP; KEGG: yen:YE1948 hypothetical protein; endoribonuclease L-PSP 2004938 5605418 Spro_1821 Serratia proteamaculans 568 endoribonuclease L-PSP YP_001478052.1 2004552 R 399741 CDS YP_001478053.1 157370064 5605419 complement(2004987..2005733) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE1949 putative isochorismatase; isochorismatase hydrolase 2005733 5605419 Spro_1822 Serratia proteamaculans 568 isochorismatase hydrolase YP_001478053.1 2004987 R 399741 CDS YP_001478054.1 157370065 5605420 complement(2005733..2006833) 1 NC_009832.1 PFAM: luciferase family protein; KEGG: yen:YE1950 alkanesulfonate monooxygenase; luciferase family protein 2006833 5605420 Spro_1823 Serratia proteamaculans 568 luciferase family protein YP_001478054.1 2005733 R 399741 CDS YP_001478055.1 157370066 5605467 2007119..2007793 1 NC_009832.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: yen:YE1951 putative TetR-family transcriptional regulatory protein; TetR family transcriptional regulator 2007793 5605467 Spro_1824 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478055.1 2007119 D 399741 CDS YP_001478056.1 157370067 5605468 complement(2007837..2009237) 1 NC_009832.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease 2009237 5605468 Spro_1825 Serratia proteamaculans 568 D-alanine/D-serine/glycine permease YP_001478056.1 2007837 R 399741 CDS YP_001478057.1 157370068 5605469 complement(2009926..2010420) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0269 DedA family protein; DedA family protein 2010420 5605469 Spro_1826 Serratia proteamaculans 568 DedA family protein YP_001478057.1 2009926 R 399741 CDS YP_001478058.1 157370069 5605527 2010577..2010876 1 NC_009832.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE3018 hypothetical protein; antibiotic biosynthesis monooxygenase 2010876 5605527 Spro_1827 Serratia proteamaculans 568 antibiotic biosynthesis monooxygenase YP_001478058.1 2010577 D 399741 CDS YP_001478059.1 157370070 5605528 complement(2010981..2011703) 1 NC_009832.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV1350 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2011703 5605528 Spro_1828 Serratia proteamaculans 568 enoyl-CoA hydratase/isomerase YP_001478059.1 2010981 R 399741 CDS YP_001478060.1 157370071 5605563 complement(2011696..2012868) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A0797 major facilitator transporter superfamily MFS_1; major facilitator transporter 2012868 5605563 Spro_1829 Serratia proteamaculans 568 major facilitator transporter YP_001478060.1 2011696 R 399741 CDS YP_001478061.1 157370072 5605564 complement(2012865..2014076) 1 NC_009832.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 2014076 5605564 Spro_1830 Serratia proteamaculans 568 5-aminolevulinate synthase YP_001478061.1 2012865 R 399741 CDS YP_001478062.1 157370073 5605565 complement(2014092..2015303) 1 NC_009832.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: csa:Csal_0301 beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase 2015303 5605565 Spro_1831 Serratia proteamaculans 568 acetyl-CoA acetyltransferase YP_001478062.1 2014092 R 399741 CDS YP_001478063.1 157370074 5605628 complement(2015313..2016842) 1 NC_009832.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pin:Ping_0657 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 2016842 5605628 Spro_1832 Serratia proteamaculans 568 3-hydroxybutyryl-CoA dehydrogenase YP_001478063.1 2015313 R 399741 CDS YP_001478064.1 157370075 5605629 2017190..2017906 1 NC_009832.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bvi:Bcep1808_6456 autoinducer-binding domain protein; LuxR family transcriptional regulator 2017906 5605629 Spro_1833 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001478064.1 2017190 D 399741 CDS YP_001478065.1 157370076 5605630 2018084..2018512 1 NC_009832.1 PFAM: UspA domain protein; KEGG: eca:ECA1769 hypothetical protein; UspA domain-containing protein 2018512 5605630 Spro_1834 Serratia proteamaculans 568 UspA domain-containing protein YP_001478065.1 2018084 D 399741 CDS YP_001478066.1 157370077 5605682 complement(2018559..2019572) 1 NC_009832.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: kpn:KPN_04791 putative dehydrogenase; malate/L-lactate dehydrogenase 2019572 5605682 Spro_1835 Serratia proteamaculans 568 malate/L-lactate dehydrogenase YP_001478066.1 2018559 R 399741 CDS YP_001478067.1 157370078 5605683 complement(2019591..2021156) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_1414 amino acid transporter, putative; amino acid permease-associated protein 2021156 5605683 Spro_1836 Serratia proteamaculans 568 amino acid permease-associated protein YP_001478067.1 2019591 R 399741 CDS YP_001478068.1 157370079 5605684 complement(2021201..2022811) 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: pae:PA2217 probable aldehyde dehydrogenase; aldehyde dehydrogenase 2022811 5605684 Spro_1837 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001478068.1 2021201 R 399741 CDS YP_001478069.1 157370080 5605705 complement(2022869..2023789) 1 NC_009832.1 PFAM: dihydrodipicolinate synthetase; KEGG: bch:Bcen2424_4139 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2023789 5605705 Spro_1838 Serratia proteamaculans 568 dihydrodipicolinate synthetase YP_001478069.1 2022869 R 399741 CDS YP_001478070.1 157370081 5605706 complement(2023997..2024842) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: plu:plu2244 hypothetical protein; AraC family transcriptional regulator 2024842 5605706 Spro_1839 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478070.1 2023997 R 399741 CDS YP_001478071.1 157370082 5605707 2025128..2026075 1 NC_009832.1 PFAM: proline racemase; KEGG: pap:PSPA7_4122 hypothetical protein; proline racemase 2026075 5605707 Spro_1840 Serratia proteamaculans 568 proline racemase YP_001478071.1 2025128 D 399741 CDS YP_001478072.1 157370083 5605730 2026075..2027199 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; KEGG: plu:plu2242 hypothetical protein; FAD dependent oxidoreductase 2027199 5605730 Spro_1841 Serratia proteamaculans 568 FAD dependent oxidoreductase YP_001478072.1 2026075 D 399741 CDS YP_001478073.1 157370084 5605731 2027196..2027450 1 NC_009832.1 PFAM: ferredoxin; KEGG: bam:Bamb_3552 ferredoxin; ferredoxin 2027450 5605731 Spro_1842 Serratia proteamaculans 568 ferredoxin YP_001478073.1 2027196 D 399741 CDS YP_001478074.1 157370085 5605732 2027443..2028705 1 NC_009832.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_B1891 pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2028705 5605732 Spro_1843 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001478074.1 2027443 D 399741 CDS YP_001478075.1 157370086 5605743 complement(2028803..2029159) 1 NC_009832.1 KEGG: plu:plu3625 hypothetical protein; hypothetical protein 2029159 5605743 Spro_1844 Serratia proteamaculans 568 hypothetical protein YP_001478075.1 2028803 R 399741 CDS YP_001478076.1 157370087 5605744 2029575..2029934 1 NC_009832.1 hypothetical protein 2029934 5605744 Spro_1845 Serratia proteamaculans 568 hypothetical protein YP_001478076.1 2029575 D 399741 CDS YP_001478077.1 157370088 5605745 2030166..2030597 1 NC_009832.1 KEGG: yen:YE2300 hypothetical protein; hypothetical protein 2030597 5605745 Spro_1846 Serratia proteamaculans 568 hypothetical protein YP_001478077.1 2030166 D 399741 CDS YP_001478078.1 157370089 5605809 complement(2030674..2030898) 1 NC_009832.1 KEGG: yen:YE1832 hypothetical protein; hypothetical protein 2030898 5605809 Spro_1847 Serratia proteamaculans 568 hypothetical protein YP_001478078.1 2030674 R 399741 CDS YP_001478079.1 157370090 5605810 2031663..2032319 1 NC_009832.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2032319 5605810 Spro_1848 Serratia proteamaculans 568 response regulator YP_001478079.1 2031663 D 399741 CDS YP_001478080.1 157370091 5605811 2032312..2034144 1 NC_009832.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2034144 uvrC 5605811 uvrC Serratia proteamaculans 568 excinuclease ABC subunit C YP_001478080.1 2032312 D 399741 CDS YP_001478081.1 157370092 5605874 2034203..2034751 1 NC_009832.1 KEGG: ypi:YpsIP31758_2251 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylglycerophosphate synthetase 2034751 5605874 Spro_1850 Serratia proteamaculans 568 phosphatidylglycerophosphate synthetase YP_001478081.1 2034203 D 399741 CDS YP_001478082.1 157370093 5605782 2035409..2035720 1 NC_009832.1 KEGG: plu:plu2537 hypothetical protein; hypothetical protein 2035720 5605782 Spro_1851 Serratia proteamaculans 568 hypothetical protein YP_001478082.1 2035409 D 399741 CDS YP_001478083.1 157370094 5605876 2035723..2036016 1 NC_009832.1 SMART: helix-turn-helix domain protein; KEGG: plu:plu2536 hypothetical protein; XRE family transcriptional regulator 2036016 5605876 Spro_1852 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001478083.1 2035723 D 399741 CDS YP_001478084.1 157370095 5605929 complement(2036319..2036549) 1 NC_009832.1 hypothetical protein 2036549 5605929 Spro_1853 Serratia proteamaculans 568 hypothetical protein YP_001478084.1 2036319 R 399741 CDS YP_001478085.1 157370096 5605930 complement(2036766..2037908) 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pfo:Pfl_0722 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2037908 5605930 Spro_1854 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001478085.1 2036766 R 399741 CDS YP_001478086.1 157370097 5605931 2038312..2038617 1 NC_009832.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: plu:plu2754 PTS system, cellobiose-specific IIB component; phosphotransferase system lactose/cellobiose-specific IIB subunit 2038617 5605931 Spro_1855 Serratia proteamaculans 568 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_001478086.1 2038312 D 399741 CDS YP_001478087.1 157370098 5605932 2038729..2039055 1 NC_009832.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: kpn:KPN_04368 putative PEP-dependent phosphotransferase enzyme III; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 2039055 5605932 Spro_1856 Serratia proteamaculans 568 phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_001478087.1 2038729 D 399741 CDS YP_001478088.1 157370099 5605933 2039048..2040349 1 NC_009832.1 PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase; glycoside hydrolase family protein 2040349 5605933 Spro_1857 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478088.1 2039048 D 399741 CDS YP_001478089.1 157370100 5605952 2040405..2041766 1 NC_009832.1 KEGG: kpn:KPN_04650 putative phosphotransferase protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PTS system, cellobiose-specific IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 2041766 5605952 Spro_1858 Serratia proteamaculans 568 PTS system lactose/cellobiose family transporter subunit IIC YP_001478089.1 2040405 D 399741 CDS YP_001478090.1 157370101 5605953 2041985..2043649 1 NC_009832.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 2043649 5605953 Spro_1859 Serratia proteamaculans 568 phosphoethanolamine transferase YP_001478090.1 2041985 D 399741 CDS YP_001478091.1 157370102 5605954 complement(2043740..2045242) 1 NC_009832.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; Osmosensory transporter coiled coil; KEGG: yen:YE3594 proline/betaine transporter; proline/glycine betaine transporter 2045242 5605954 Spro_1860 Serratia proteamaculans 568 proline/glycine betaine transporter YP_001478091.1 2043740 R 399741 CDS YP_001478092.1 157370103 5605976 complement(2045647..2047011) 1 NC_009832.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: ppd:Ppro_2218 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2047011 5605976 Spro_1861 Serratia proteamaculans 568 RND efflux system outer membrane lipoprotein YP_001478092.1 2045647 R 399741 CDS YP_001478093.1 157370104 5605977 complement(2047015..2048955) 1 NC_009832.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sgl:SG1459 putative ABC transporter ATP-binding component; ABC transporter-like protein 2048955 5605977 Spro_1862 Serratia proteamaculans 568 ABC transporter-like protein YP_001478093.1 2047015 R 399741 CDS YP_001478094.1 157370105 5605978 complement(2048952..2050133) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sgl:SG1458 putative secretion protein; RND family efflux transporter MFP subunit 2050133 5605978 Spro_1863 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001478094.1 2048952 R 399741 CDS YP_001478095.1 157370106 5606251 2050670..2050969 1 NC_009832.1 KEGG: sgl:SG1153 hypothetical protein; hypothetical protein 2050969 5606251 Spro_1864 Serratia proteamaculans 568 hypothetical protein YP_001478095.1 2050670 D 399741 CDS YP_001478096.1 157370107 5606092 2051061..2051600 1 NC_009832.1 KEGG: yen:YE2596 hypothetical protein; hypothetical protein 2051600 5606092 Spro_1865 Serratia proteamaculans 568 hypothetical protein YP_001478096.1 2051061 D 399741 CDS YP_001478097.1 157370108 5606093 2051670..2051801 1 NC_009832.1 hypothetical protein 2051801 5606093 Spro_1866 Serratia proteamaculans 568 hypothetical protein YP_001478097.1 2051670 D 399741 CDS YP_001478098.1 157370109 5606151 complement(2052276..2053997) 1 NC_009832.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 2053997 5606151 Spro_1867 Serratia proteamaculans 568 potassium/proton antiporter YP_001478098.1 2052276 R 399741 CDS YP_001478099.1 157370110 5606152 complement(2054284..2054508) 1 NC_009832.1 KEGG: yen:YE1603 hypothetical protein; hypothetical protein 2054508 5606152 Spro_1868 Serratia proteamaculans 568 hypothetical protein YP_001478099.1 2054284 R 399741 CDS YP_001478100.1 157370111 5606153 complement(2054834..2055964) 1 NC_009832.1 required for the transfer of succinyl residues to the glucan backbone; glucans biosynthesis protein 2055964 mdoC 5606153 mdoC Serratia proteamaculans 568 glucans biosynthesis protein YP_001478100.1 2054834 R 399741 CDS YP_001478101.1 157370112 5606154 2056223..2057791 1 NC_009832.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2057791 mdoG 5606154 mdoG Serratia proteamaculans 568 glucan biosynthesis protein G YP_001478101.1 2056223 D 399741 CDS YP_001478102.1 157370113 5606155 2057784..2060345 1 NC_009832.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2060345 5606155 Spro_1871 Serratia proteamaculans 568 glucosyltransferase MdoH YP_001478102.1 2057784 D 399741 CDS YP_001478103.1 157370114 5606156 2060505..2060753 1 NC_009832.1 PFAM: protein of unknown function DUF1375; KEGG: yps:YPTB2492 hypothetical protein; hypothetical protein 2060753 5606156 Spro_1872 Serratia proteamaculans 568 hypothetical protein YP_001478103.1 2060505 D 399741 CDS YP_001478104.1 157370115 5606159 complement(2060744..2061304) 1 NC_009832.1 KEGG: bte:BTH_II1582 hypothetical protein; hypothetical protein 2061304 5606159 Spro_1873 Serratia proteamaculans 568 hypothetical protein YP_001478104.1 2060744 R 399741 CDS YP_001478105.1 157370116 5606160 complement(2061370..2061747) 1 NC_009832.1 KEGG: spt:SPA1698 acidic protein MsyB; multicopy suppressor of SecY; hypothetical protein 2061747 5606160 Spro_1874 Serratia proteamaculans 568 hypothetical protein YP_001478105.1 2061370 R 399741 CDS YP_001478106.1 157370117 5606161 2061955..2063625 1 NC_009832.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: kpn:KPN_03016 putative isopropylmalate/homocitrate/citramalate synthase; 2-isopropylmalate synthase 2063625 5606161 Spro_1875 Serratia proteamaculans 568 2-isopropylmalate synthase YP_001478106.1 2061955 D 399741 CDS YP_001478107.1 157370118 5606168 complement(2063610..2064371) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: ent:Ent638_3166 transcriptional regulator, AraC family; AraC family transcriptional regulator 2064371 5606168 Spro_1876 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478107.1 2063610 R 399741 CDS YP_001478108.1 157370119 5606169 2064513..2064824 1 NC_009832.1 PFAM: regulatory protein ArsR; KEGG: cvi:CV_0084 probable transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2064824 5606169 Spro_1877 Serratia proteamaculans 568 ArsR family transcriptional regulator YP_001478108.1 2064513 D 399741 CDS YP_001478109.1 157370120 5606170 2064821..2065255 1 NC_009832.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: cvi:CV_0083 hypothetical protein; hypothetical protein 2065255 5606170 Spro_1878 Serratia proteamaculans 568 hypothetical protein YP_001478109.1 2064821 D 399741 CDS YP_001478110.1 157370121 5606235 2065260..2065679 1 NC_009832.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nmu:Nmul_A1684 YeeE/YedE; hypothetical protein 2065679 5606235 Spro_1879 Serratia proteamaculans 568 hypothetical protein YP_001478110.1 2065260 D 399741 CDS YP_001478111.1 157370122 5606236 2065679..2066077 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vfi:VFA0660 prolyl endopeptidase; glyoxalase/bleomycin resistance protein/dioxygenase 2066077 5606236 Spro_1880 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001478111.1 2065679 D 399741 CDS YP_001478112.1 157370123 5606246 complement(2066126..2067679) 1 NC_009832.1 KEGG: ent:Ent638_0823 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 2067679 5606246 Spro_1881 Serratia proteamaculans 568 amino acid/peptide transporter YP_001478112.1 2066126 R 399741 CDS YP_001478113.1 157370124 5606247 complement(2068156..2069391) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1610 putative MFS-family transport protein; major facilitator transporter 2069391 5606247 Spro_1882 Serratia proteamaculans 568 major facilitator transporter YP_001478113.1 2068156 R 399741 CDS YP_001478114.1 157370125 5606248 complement(2069592..2069876) 1 NC_009832.1 PFAM: YCII-related; KEGG: yen:YE1740 hypothetical protein; YCII-like protein 2069876 5606248 Spro_1883 Serratia proteamaculans 568 YCII-like protein YP_001478114.1 2069592 R 399741 CDS YP_001478115.1 157370126 5606301 complement(2069981..2070901) 1 NC_009832.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2070901 5606301 Spro_1884 Serratia proteamaculans 568 lipid A biosynthesis lauroyl acyltransferase YP_001478115.1 2069981 R 399741 CDS YP_001478116.1 157370127 5606302 complement(2071148..2071573) 1 NC_009832.1 KEGG: eca:ECA1780 putative NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 2071573 5606302 Spro_1885 Serratia proteamaculans 568 NADH:flavin oxidoreductase YP_001478116.1 2071148 R 399741 CDS YP_001478117.1 157370128 5606303 2071749..2072819 1 NC_009832.1 PFAM: Rhodanese domain protein; KEGG: ypi:YpsIP31758_1560 rhodanese domain protein; hypothetical protein 2072819 5606303 Spro_1886 Serratia proteamaculans 568 hypothetical protein YP_001478117.1 2071749 D 399741 CDS YP_001478118.1 157370129 5606310 complement(2072862..2073440) 1 NC_009832.1 PFAM: YceI family protein; KEGG: yen:YE1254 hypothetical protein; YceI family protein 2073440 5606310 Spro_1887 Serratia proteamaculans 568 YceI family protein YP_001478118.1 2072862 R 399741 CDS YP_001478119.1 157370130 5606311 complement(2073464..2074018) 1 NC_009832.1 PFAM: cytochrome B561; KEGG: yen:YE1253 hypothetical protein; cytochrome B561 2074018 5606311 Spro_1888 Serratia proteamaculans 568 cytochrome B561 YP_001478119.1 2073464 R 399741 CDS YP_001478120.1 157370131 5606312 2074443..2075495 1 NC_009832.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; putative transport protein 2075495 tqsA 5606312 tqsA Serratia proteamaculans 568 putative transport protein YP_001478120.1 2074443 D 399741 CDS YP_001478121.1 157370132 5606319 complement(2075605..2075721) 1 NC_009832.1 KEGG: ypi:YpsIP31758_1562 hypothetical protein; hypothetical protein 2075721 5606319 Spro_1890 Serratia proteamaculans 568 hypothetical protein YP_001478121.1 2075605 R 399741 CDS YP_001478122.1 157370133 5606320 complement(2075842..2076468) 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: yen:YE1621 putative LuxR-family regulatory protein; LuxR family transcriptional regulator 2076468 5606320 Spro_1891 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001478122.1 2075842 R 399741 CDS YP_001478123.1 157370134 5606321 complement(2076695..2077810) 1 NC_009832.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 2077810 solA 5606321 solA Serratia proteamaculans 568 N-methyltryptophan oxidase YP_001478123.1 2076695 R 399741 CDS YP_001478124.1 157370135 5606330 complement(2077953..2078207) 1 NC_009832.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 2078207 bssS 5606330 bssS Serratia proteamaculans 568 biofilm formation regulatory protein BssS YP_001478124.1 2077953 R 399741 CDS YP_001478125.1 157370136 5606331 complement(2078406..2078684) 1 NC_009832.1 KEGG: eca:ECA1785 hypothetical protein; hypothetical protein 2078684 5606331 Spro_1894 Serratia proteamaculans 568 hypothetical protein YP_001478125.1 2078406 R 399741 CDS YP_001478126.1 157370137 5606332 complement(2078822..2079061) 1 NC_009832.1 PFAM: DinI family protein; KEGG: yen:YE1624 DNA-damage-inducible protein I; DNA damage-inducible protein I 2079061 5606332 Spro_1895 Serratia proteamaculans 568 DNA damage-inducible protein I YP_001478126.1 2078822 R 399741 CDS YP_001478127.1 157370138 5606386 complement(2079142..2080188) 1 NC_009832.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2080188 5606386 Spro_1896 Serratia proteamaculans 568 dihydroorotase YP_001478127.1 2079142 R 399741 CDS YP_001478128.1 157370139 5606387 2080413..2080700 1 NC_009832.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE1626 hypothetical protein; antibiotic biosynthesis monooxygenase 2080700 5606387 Spro_1897 Serratia proteamaculans 568 antibiotic biosynthesis monooxygenase YP_001478128.1 2080413 D 399741 CDS YP_001478129.1 157370140 5606388 complement(2080764..2084132) 1 NC_009832.1 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E 2084132 rne 5606388 rne Serratia proteamaculans 568 ribonuclease E YP_001478129.1 2080764 R 399741 CDS YP_001478130.1 157370141 5606415 2084685..2085647 1 NC_009832.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C 2085647 5606415 Spro_1899 Serratia proteamaculans 568 23S rRNA pseudouridylate synthase C YP_001478130.1 2084685 D 399741 CDS YP_001478131.1 157370142 5606416 complement(2085655..2086275) 1 NC_009832.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: ent:Ent638_1602 maf protein; maf protein 2086275 5606416 Spro_1900 Serratia proteamaculans 568 maf protein YP_001478131.1 2085655 R 399741 CDS YP_001478132.1 157370143 5606417 2086378..2086899 1 NC_009832.1 PFAM: protein of unknown function DUF177; KEGG: yen:YE1630 hypothetical protein; hypothetical protein 2086899 5606417 Spro_1901 Serratia proteamaculans 568 hypothetical protein YP_001478132.1 2086378 D 399741 CDS YP_001478133.1 157370144 5606427 2086916..2087083 1 NC_009832.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2087083 rpmF 5606427 rpmF Serratia proteamaculans 568 50S ribosomal protein L32 YP_001478133.1 2086916 D 399741 CDS YP_001478134.1 157370145 5606428 2087095..2088129 1 NC_009832.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2088129 5606428 Spro_1903 Serratia proteamaculans 568 putative glycerol-3-phosphate acyltransferase PlsX YP_001478134.1 2087095 D 399741 CDS YP_001478135.1 157370146 5606429 2088136..2089089 1 NC_009832.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 2089089 5606429 Spro_1904 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase III YP_001478135.1 2088136 D 399741 CDS YP_001478136.1 157370147 5606439 2089107..2090036 1 NC_009832.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: yen:YE1634 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2090036 5606439 Spro_1905 Serratia proteamaculans 568 malonyl CoA-acyl carrier protein transacylase YP_001478136.1 2089107 D 399741 CDS YP_001478137.1 157370148 5606440 2090048..2090782 1 NC_009832.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 2090782 fabG 5606440 fabG Serratia proteamaculans 568 3-ketoacyl-(acyl-carrier-protein) reductase YP_001478137.1 2090048 D 399741 CDS YP_001478138.1 157370149 5606458 2090937..2091173 1 NC_009832.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2091173 acpP 5606458 acpP Serratia proteamaculans 568 acyl carrier protein YP_001478138.1 2090937 D 399741 CDS YP_001478139.1 157370150 5606459 2091255..2092496 1 NC_009832.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2092496 5606459 Spro_1908 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase II YP_001478139.1 2091255 D 399741 CDS YP_001478140.1 157370151 5606460 2092673..2093470 1 NC_009832.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 2093470 5606460 Spro_1909 Serratia proteamaculans 568 4-amino-4-deoxychorismate lyase YP_001478140.1 2092673 D 399741 CDS YP_001478141.1 157370152 5606490 2093484..2094509 1 NC_009832.1 PFAM: aminodeoxychorismate lyase; KEGG: yen:YE1639 hypothetical protein; aminodeoxychorismate lyase 2094509 5606490 Spro_1910 Serratia proteamaculans 568 aminodeoxychorismate lyase YP_001478141.1 2093484 D 399741 CDS YP_001478142.1 157370153 5606491 2094499..2095137 1 NC_009832.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2095137 tmk 5606491 tmk Serratia proteamaculans 568 thymidylate kinase YP_001478142.1 2094499 D 399741 CDS YP_001478143.1 157370154 5606492 2095137..2096144 1 NC_009832.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2096144 5606492 Spro_1912 Serratia proteamaculans 568 DNA polymerase III subunit delta' YP_001478143.1 2095137 D 399741 CDS YP_001478144.1 157370155 5606554 2096159..2096935 1 NC_009832.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: yen:YE1642 putative deoxyribonuclease; putative metallodependent hydrolase 2096935 5606554 Spro_1913 Serratia proteamaculans 568 putative metallodependent hydrolase YP_001478144.1 2096159 D 399741 CDS YP_001478145.1 157370156 5606555 2097274..2098707 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 2098707 5606555 Spro_1914 Serratia proteamaculans 568 PTS system glucose-specific transporter subunits IIBC YP_001478145.1 2097274 D 399741 CDS YP_001478146.1 157370157 5606556 complement(2098764..2099234) 1 NC_009832.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR 2099234 5606556 Spro_1915 Serratia proteamaculans 568 manganese transport regulator MntR YP_001478146.1 2098764 R 399741 CDS YP_001478147.1 157370158 5606577 2099464..2100768 1 NC_009832.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bbt:BBta_1556 manganese/divalent cation transport protein (NRAMP family); Mn2+/Fe2+ transporter 2100768 5606577 Spro_1916 Serratia proteamaculans 568 Mn2+/Fe2+ transporter YP_001478147.1 2099464 D 399741 CDS YP_001478148.1 157370159 5606578 complement(2100822..2101568) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: yen:YE3354 putative oxidoreductase; short chain dehydrogenase 2101568 5606578 Spro_1917 Serratia proteamaculans 568 short chain dehydrogenase YP_001478148.1 2100822 R 399741 CDS YP_001478149.1 157370160 5606579 2101668..2102045 1 NC_009832.1 PFAM: helix-turn-helix HxlR type; KEGG: eca:ECA0746 putative transcriptional regulator; HxlR family transcriptional regulator 2102045 5606579 Spro_1918 Serratia proteamaculans 568 HxlR family transcriptional regulator YP_001478149.1 2101668 D 399741 CDS YP_001478150.1 157370161 5606628 complement(2102042..2102947) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA2157 ABC transporter, substrate binding protein; extracellular solute-binding protein 2102947 5606628 Spro_1919 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478150.1 2102042 R 399741 CDS YP_001478151.1 157370162 5606629 2103202..2103552 1 NC_009832.1 PFAM: histidine triad (HIT) protein; KEGG: ypi:YpsIP31758_1588 histidine triad nucleotide-binding protein HinT; histidine triad (HIT) protein 2103552 5606629 Spro_1920 Serratia proteamaculans 568 histidine triad (HIT) protein YP_001478151.1 2103202 D 399741 CDS YP_001478152.1 157370163 5606630 2103565..2103954 1 NC_009832.1 PFAM: protein of unknown function DUF1425; KEGG: ypi:YpsIP31758_1589 putative lipoprotein; hypothetical protein 2103954 5606630 Spro_1921 Serratia proteamaculans 568 hypothetical protein YP_001478152.1 2103565 D 399741 CDS YP_001478153.1 157370164 5606645 2103982..2104569 1 NC_009832.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: eca:ECA1811 putative lipoprotein; membrane lipoprotein lipid attachment site 2104569 5606645 Spro_1922 Serratia proteamaculans 568 membrane lipoprotein lipid attachment site YP_001478153.1 2103982 D 399741 CDS YP_001478154.1 157370165 5606646 2104550..2105419 1 NC_009832.1 PFAM: aminoglycoside phosphotransferase; KEGG: ypi:YpsIP31758_1591 thiamine kinase; thiamine kinase 2105419 5606646 Spro_1923 Serratia proteamaculans 568 thiamine kinase YP_001478154.1 2104550 D 399741 CDS YP_001478155.1 157370166 5606647 2105451..2106470 1 NC_009832.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2106470 5606647 Spro_1924 Serratia proteamaculans 568 beta-hexosaminidase YP_001478155.1 2105451 D 399741 CDS YP_001478156.1 157370167 5606654 2106543..2107085 1 NC_009832.1 PFAM: protein of unknown function UPF0227; KEGG: ypi:YpsIP31758_1593 hypothetical protein; hypothetical protein 2107085 5606654 Spro_1925 Serratia proteamaculans 568 hypothetical protein YP_001478156.1 2106543 D 399741 CDS YP_001478157.1 157370168 5606655 2107418..2108722 1 NC_009832.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: yen:YE1707 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2108722 5606655 Spro_1926 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001478157.1 2107418 D 399741 CDS YP_001478158.1 157370169 5606656 2109084..2109620 1 NC_009832.1 PFAM: 17 kDa surface antigen; KEGG: eci:UTI89_C1238 hypothetical protein YcfJ; hypothetical protein 2109620 5606656 Spro_1927 Serratia proteamaculans 568 hypothetical protein YP_001478158.1 2109084 D 399741 CDS YP_001478159.1 157370170 5606677 2109912..2110397 1 NC_009832.1 PFAM: protein of unknown function UPF0074; KEGG: kpn:KPN_02971 putative transcriptional regulator; BadM/Rrf2 family transcriptional regulator 2110397 5606677 Spro_1928 Serratia proteamaculans 568 BadM/Rrf2 family transcriptional regulator YP_001478159.1 2109912 D 399741 CDS YP_001478160.1 157370171 5606678 complement(2110480..2113626) 1 NC_009832.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: kpn:KPN_02970 integral transmembrane protein; acridine resistance; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2113626 5606678 Spro_1929 Serratia proteamaculans 568 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001478160.1 2110480 R 399741 CDS YP_001478161.1 157370172 5606679 complement(2113650..2114816) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_1891 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2114816 5606679 Spro_1930 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001478161.1 2113650 R 399741 CDS YP_001478162.1 157370173 5606695 2115133..2115489 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: kpn:KPN_02968 putative helix-turn-helix, AraC type; AraC family transcriptional regulator 2115489 5606695 Spro_1931 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478162.1 2115133 D 399741 CDS YP_001478163.1 157370174 5605559 2116416..2118026 1 NC_009832.1 KEGG: lpc:LPC_0954 peptide transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 2118026 5605559 Spro_1932 Serratia proteamaculans 568 amino acid/peptide transporter YP_001478163.1 2116416 D 399741 CDS YP_001478164.1 157370175 5606872 2118153..2119094 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yen:YE2422 putative oxidoreductase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2119094 5606872 Spro_1933 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001478164.1 2118153 D 399741 CDS YP_001478165.1 157370176 5606873 2119181..2119918 1 NC_009832.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ypi:YpsIP31758_2053 putative phosphoesterase; putative hydrolase 2119918 5606873 Spro_1934 Serratia proteamaculans 568 putative hydrolase YP_001478165.1 2119181 D 399741 CDS YP_001478166.1 157370177 5606874 2119961..2120548 1 NC_009832.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein; cytoplasmic chaperone TorD family protein 2120548 5606874 Spro_1935 Serratia proteamaculans 568 cytoplasmic chaperone TorD family protein YP_001478166.1 2119961 D 399741 CDS YP_001478167.1 157370178 5606875 2120718..2121371 1 NC_009832.1 PFAM: protein of unknown function DUF533; KEGG: eca:ECA1747 hypothetical protein; hypothetical protein 2121371 5606875 Spro_1936 Serratia proteamaculans 568 hypothetical protein YP_001478167.1 2120718 D 399741 CDS YP_001478168.1 157370179 5606876 2121440..2123473 1 NC_009832.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: yen:YE1789 oligopeptidase B; oligopeptidase B 2123473 5606876 Spro_1937 Serratia proteamaculans 568 oligopeptidase B YP_001478168.1 2121440 D 399741 CDS YP_001478169.1 157370180 5606877 complement(2123508..2124176) 1 NC_009832.1 3'-5' exonuclease activity on single or double-strand DNA; exodeoxyribonuclease X 2124176 5606877 Spro_1938 Serratia proteamaculans 568 exodeoxyribonuclease X YP_001478169.1 2123508 R 399741 CDS YP_001478170.1 157370181 5606931 2124614..2125039 1 NC_009832.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: pap:PSPA7_6338 RNA polymerase-binding protein DksA; TraR/DksA family transcriptional regulator 2125039 5606931 Spro_1939 Serratia proteamaculans 568 TraR/DksA family transcriptional regulator YP_001478170.1 2124614 D 399741 CDS YP_001478171.1 157370182 5606932 2125212..2126165 1 NC_009832.1 KEGG: ypp:YPDSF_1342 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 2126165 5606932 Spro_1940 Serratia proteamaculans 568 proline iminopeptidase YP_001478171.1 2125212 D 399741 CDS YP_001478172.1 157370183 5606933 complement(2126347..2126577) 1 NC_009832.1 PFAM: DNA polymerase II beta subunit; KEGG: eca:ECA2475 DNA polymerase III, theta subunit; DNA polymerase III subunit theta 2126577 5606933 Spro_1941 Serratia proteamaculans 568 DNA polymerase III subunit theta YP_001478172.1 2126347 R 399741 CDS YP_001478173.1 157370184 5606937 2126952..2127470 1 NC_009832.1 PFAM: Ferritin Dps family protein; KEGG: yen:YE1795 ferritin; ferroxidase 2127470 5606937 Spro_1942 Serratia proteamaculans 568 ferroxidase YP_001478173.1 2126952 D 399741 CDS YP_001478174.1 157370185 5606938 2127794..2128177 1 NC_009832.1 PFAM: copper resistance protein CopC; KEGG: yen:YE1796 putative copper resistance protein; copper resistance protein CopC 2128177 5606938 Spro_1943 Serratia proteamaculans 568 copper resistance protein CopC YP_001478174.1 2127794 D 399741 CDS YP_001478175.1 157370186 5606939 2128181..2129062 1 NC_009832.1 PFAM: copper resistance D domain protein; KEGG: ypi:YpsIP31758_2338 copper resistance protein D; copper resistance D domain-containing protein 2129062 5606939 Spro_1944 Serratia proteamaculans 568 copper resistance D domain-containing protein YP_001478175.1 2128181 D 399741 CDS YP_001478176.1 157370187 5607090 2129132..2129473 1 NC_009832.1 KEGG: yen:YE1798 hypothetical protein; hypothetical protein 2129473 5607090 Spro_1945 Serratia proteamaculans 568 hypothetical protein YP_001478176.1 2129132 D 399741 CDS YP_001478177.1 157370188 5607091 2129873..2130586 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_00583 putative GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2130586 5607091 Spro_1946 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478177.1 2129873 D 399741 CDS YP_001478178.1 157370189 5607092 complement(2130716..2131282) 1 NC_009832.1 KEGG: bpe:BP2072 putative lipoprotein; putative lipoprotein 2131282 5607092 Spro_1947 Serratia proteamaculans 568 putative lipoprotein YP_001478178.1 2130716 R 399741 CDS YP_001478179.1 157370190 5607286 2131764..2132045 1 NC_009832.1 KEGG: asa:ASA_2363 hypothetical protein; hypothetical protein 2132045 5607286 Spro_1948 Serratia proteamaculans 568 hypothetical protein YP_001478179.1 2131764 D 399741 CDS YP_001478180.1 157370191 5607287 2132265..2133464 1 NC_009832.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 2133464 5607287 Spro_1949 Serratia proteamaculans 568 trans-2-enoyl-CoA reductase YP_001478180.1 2132265 D 399741 CDS YP_001478181.1 157370192 5607288 2133592..2134170 1 NC_009832.1 KEGG: plu:plu3628 hypothetical protein; hypothetical protein 2134170 5607288 Spro_1950 Serratia proteamaculans 568 hypothetical protein YP_001478181.1 2133592 D 399741 CDS YP_001478182.1 157370193 5607375 2134145..2134393 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: rpe:RPE_4746 transcriptional regulator, XRE family; XRE family transcriptional regulator 2134393 5607375 Spro_1951 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001478182.1 2134145 D 399741 CDS YP_001478183.1 157370194 5607376 2135016..2135336 1 NC_009832.1 hypothetical protein 2135336 5607376 Spro_1952 Serratia proteamaculans 568 hypothetical protein YP_001478183.1 2135016 D 399741 CDS YP_001478184.1 157370195 5607377 2135379..2135672 1 NC_009832.1 hypothetical protein 2135672 5607377 Spro_1953 Serratia proteamaculans 568 hypothetical protein YP_001478184.1 2135379 D 399741 CDS YP_001478185.1 157370196 5607421 2135715..2136068 1 NC_009832.1 hypothetical protein 2136068 5607421 Spro_1954 Serratia proteamaculans 568 hypothetical protein YP_001478185.1 2135715 D 399741 CDS YP_001478186.1 157370197 5607422 complement(2136104..2137036) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pap:PSPA7_4416 transcriptional regulator, LysR family; LysR family transcriptional regulator 2137036 5607422 Spro_1955 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478186.1 2136104 R 399741 CDS YP_001478187.1 157370198 5607423 2137153..2138250 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pap:PSPA7_4414 aryl-alcohol dehydrogenase (benzyl alcoholdehydrogenase) (badh); alcohol dehydrogenase 2138250 5607423 Spro_1956 Serratia proteamaculans 568 alcohol dehydrogenase YP_001478187.1 2137153 D 399741 CDS YP_001478188.1 157370199 5607448 2138271..2138819 1 NC_009832.1 KEGG: pap:PSPA7_4413 hypothetical protein; hypothetical protein 2138819 5607448 Spro_1957 Serratia proteamaculans 568 hypothetical protein YP_001478188.1 2138271 D 399741 CDS YP_001478189.1 157370200 5607449 complement(2138859..2139572) 1 NC_009832.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 2139572 5607449 Spro_1958 Serratia proteamaculans 568 DNA-binding transcriptional activator DcuR YP_001478189.1 2138859 R 399741 CDS YP_001478190.1 157370201 5607074 complement(2139576..2141177) 1 NC_009832.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 2141177 5607074 Spro_1959 Serratia proteamaculans 568 sensory histidine kinase DcuS YP_001478190.1 2139576 R 399741 CDS YP_001478191.1 157370202 5607075 complement(2141300..2142142) 1 NC_009832.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sme:SMb20498 hypothetical protein; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 2142142 5607075 Spro_1960 Serratia proteamaculans 568 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001478191.1 2141300 R 399741 CDS YP_001478192.1 157370203 5607076 2142676..2143605 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 2143605 5607076 Spro_1961 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001478192.1 2142676 D 399741 CDS YP_001478193.1 157370204 5607307 2143683..2145167 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00510 putative ABC transporter; ABC transporter-like protein 2145167 5607307 Spro_1962 Serratia proteamaculans 568 ABC transporter-like protein YP_001478193.1 2143683 D 399741 CDS YP_001478194.1 157370205 5607308 2145185..2146213 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: kpn:KPN_00511 putative bacterial inner-membrane translocator; monosaccharide-transporting ATPase 2146213 5607308 Spro_1963 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001478194.1 2145185 D 399741 CDS YP_001478195.1 157370206 5607309 2146276..2147193 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01166 ABC-type sugar transport system, periplasmic component; periplasmic binding protein/LacI transcriptional regulator 2147193 5607309 Spro_1964 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001478195.1 2146276 D 399741 CDS YP_001478196.1 157370207 5603454 2147339..2149432 1 NC_009832.1 KEGG: mem:Memar_0550 hypothetical protein; hypothetical protein 2149432 5603454 Spro_1965 Serratia proteamaculans 568 hypothetical protein YP_001478196.1 2147339 D 399741 CDS YP_001478197.1 157370208 5603455 complement(2149503..2150318) 1 NC_009832.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: spt:SPA0252 putative lipoprotein precursor; YaeC family lipoprotein 2150318 5603455 Spro_1966 Serratia proteamaculans 568 YaeC family lipoprotein YP_001478197.1 2149503 R 399741 CDS YP_001478198.1 157370209 5603456 2150604..2151122 1 NC_009832.1 KEGG: aba:Acid345_3568 hypothetical protein; hypothetical protein 2151122 5603456 Spro_1967 Serratia proteamaculans 568 hypothetical protein YP_001478198.1 2150604 D 399741 CDS YP_001478199.1 157370210 5603419 2151457..2152848 1 NC_009832.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: stm:STM3820 putative cytochrome c peroxidase; cytochrome-c peroxidase 2152848 5603419 Spro_1968 Serratia proteamaculans 568 cytochrome-c peroxidase YP_001478199.1 2151457 D 399741 CDS YP_001478200.1 157370211 5603420 2153020..2153445 1 NC_009832.1 PFAM: UspA domain protein; KEGG: ppr:PBPRA0125 putative universal stress protein A; UspA domain-containing protein 2153445 5603420 Spro_1969 Serratia proteamaculans 568 UspA domain-containing protein YP_001478200.1 2153020 D 399741 CDS YP_001478201.1 157370212 5603421 complement(2153496..2155868) 1 NC_009832.1 KEGG: vvy:VV2646 putative isomerase; putative glycosyl hydrolase 2155868 5603421 Spro_1970 Serratia proteamaculans 568 putative glycosyl hydrolase YP_001478201.1 2153496 R 399741 CDS YP_001478202.1 157370213 5603416 complement(2155886..2156965) 1 NC_009832.1 KEGG: ecs:ECs3961 hypothetical protein; hypothetical protein 2156965 5603416 Spro_1971 Serratia proteamaculans 568 hypothetical protein YP_001478202.1 2155886 R 399741 CDS YP_001478203.1 157370214 5603417 2157328..2158308 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ecj:JW3046 DNA-binding transcriptional repressor; DNA-binding transcriptional repressor EbgR 2158308 5603417 Spro_1972 Serratia proteamaculans 568 DNA-binding transcriptional repressor EbgR YP_001478203.1 2157328 D 399741 CDS YP_001478204.1 157370215 5603418 2158498..2161590 1 NC_009832.1 in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit alpha 2161590 ebgA 5603418 ebgA Serratia proteamaculans 568 cryptic beta-D-galactosidase subunit alpha YP_001478204.1 2158498 D 399741 CDS YP_001478205.1 157370216 5603376 2161587..2162039 1 NC_009832.1 in Escherichia coli this is the second beta-galactosidase system; cryptic beta-D-galactosidase subunit beta 2162039 ebgC 5603376 ebgC Serratia proteamaculans 568 cryptic beta-D-galactosidase subunit beta YP_001478205.1 2161587 D 399741 CDS YP_001478206.1 157370217 5603377 2162159..2163649 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: ecp:ECP_3169 hypothetical transporter YgjI; amino acid permease-associated protein 2163649 5603377 Spro_1975 Serratia proteamaculans 568 amino acid permease-associated protein YP_001478206.1 2162159 D 399741 CDS YP_001478207.1 157370218 5603378 2163774..2164088 1 NC_009832.1 PFAM: regulatory protein ArsR; KEGG: rle:RL1168 putative HTH family transcriptional regulator; ArsR family transcriptional regulator 2164088 5603378 Spro_1976 Serratia proteamaculans 568 ArsR family transcriptional regulator YP_001478207.1 2163774 D 399741 CDS YP_001478208.1 157370219 5603368 2164085..2164423 1 NC_009832.1 KEGG: sme:SMc03842 hypothetical protein; hypothetical protein 2164423 5603368 Spro_1977 Serratia proteamaculans 568 hypothetical protein YP_001478208.1 2164085 D 399741 CDS YP_001478209.1 157370220 5603369 2164467..2165060 1 NC_009832.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2165060 clpP 5603369 clpP Serratia proteamaculans 568 ATP-dependent Clp protease proteolytic subunit YP_001478209.1 2164467 D 399741 CDS YP_001478210.1 157370221 5603370 complement(2165117..2166508) 1 NC_009832.1 KEGG: pen:PSEEN4400 hypothetical protein; hypothetical protein 2166508 5603370 Spro_1979 Serratia proteamaculans 568 hypothetical protein YP_001478210.1 2165117 R 399741 CDS YP_001478211.1 157370222 5603337 complement(2166554..2167957) 1 NC_009832.1 KEGG: pen:PSEEN4401 hypothetical protein; hypothetical protein 2167957 5603337 Spro_1980 Serratia proteamaculans 568 hypothetical protein YP_001478211.1 2166554 R 399741 CDS YP_001478212.1 157370223 5603338 complement(2168023..2169180) 1 NC_009832.1 KEGG: sfu:Sfum_1629 hypothetical protein; hypothetical protein 2169180 5603338 Spro_1981 Serratia proteamaculans 568 hypothetical protein YP_001478212.1 2168023 R 399741 CDS YP_001478213.1 157370224 5603339 complement(2169368..2170459) 1 NC_009832.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2170459 5603339 Spro_1982 Serratia proteamaculans 568 GTP-dependent nucleic acid-binding protein EngD YP_001478213.1 2169368 R 399741 CDS YP_001478214.1 157370225 5603311 2170791..2172320 1 NC_009832.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: nis:NIS_1014 sulfate transporter; sulfate transporter 2172320 5603311 Spro_1983 Serratia proteamaculans 568 sulfate transporter YP_001478214.1 2170791 D 399741 CDS YP_001478215.1 157370226 5603312 complement(2172360..2172950) 1 NC_009832.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2172950 5603312 Spro_1984 Serratia proteamaculans 568 peptidyl-tRNA hydrolase YP_001478215.1 2172360 R 399741 CDS YP_001478216.1 157370227 5603255 2173264..2173542 1 NC_009832.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2173542 5603255 Spro_1985 Serratia proteamaculans 568 hypothetical protein YP_001478216.1 2173264 D 399741 CDS YP_001478217.1 157370228 5603256 complement(2173728..2174675) 1 NC_009832.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2174675 5603256 Spro_1986 Serratia proteamaculans 568 ribose-phosphate pyrophosphokinase YP_001478217.1 2173728 R 399741 CDS YP_001478218.1 157370229 5603257 complement(2174847..2175713) 1 NC_009832.1 KEGG: ypi:YpsIP31758_2069 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2175713 5603257 Spro_1987 Serratia proteamaculans 568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_001478218.1 2174847 R 399741 CDS YP_001478219.1 157370230 5603229 complement(2175710..2176333) 1 NC_009832.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2176333 lolB 5603229 lolB Serratia proteamaculans 568 outer membrane lipoprotein LolB YP_001478219.1 2175710 R 399741 CDS YP_001478220.1 157370231 5603230 2177050..2178312 1 NC_009832.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2178312 hemA 5603230 hemA Serratia proteamaculans 568 glutamyl-tRNA reductase YP_001478220.1 2177050 D 399741 CDS YP_001478221.1 157370232 5603231 2178346..2179431 1 NC_009832.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2179431 prfA 5603231 prfA Serratia proteamaculans 568 peptide chain release factor 1 YP_001478221.1 2178346 D 399741 CDS YP_001478222.1 157370233 5603184 2179431..2180261 1 NC_009832.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2180261 5603184 Spro_1991 Serratia proteamaculans 568 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001478222.1 2179431 D 399741 CDS YP_001478223.1 157370234 5603185 2180319..2180717 1 NC_009832.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: yen:YE2429 hypothetical protein; invasion gene expression up-regulator SirB 2180717 5603185 Spro_1992 Serratia proteamaculans 568 invasion gene expression up-regulator SirB YP_001478223.1 2180319 D 399741 CDS YP_001478224.1 157370235 5603186 2180714..2181523 1 NC_009832.1 KEGG: yen:YE2428 hypothetical protein; putative transcriptional regulator 2181523 5603186 Spro_1993 Serratia proteamaculans 568 putative transcriptional regulator YP_001478224.1 2180714 D 399741 CDS YP_001478225.1 157370236 5603500 2181557..2182411 1 NC_009832.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2182411 5603500 Spro_1994 Serratia proteamaculans 568 2-dehydro-3-deoxyphosphooctonate aldolase YP_001478225.1 2181557 D 399741 CDS YP_001478226.1 157370237 5603501 complement(2182597..2184285) 1 NC_009832.1 putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM 2184285 5603501 Spro_1995 Serratia proteamaculans 568 putative sulfate transporter YchM YP_001478226.1 2182597 R 399741 CDS YP_001478227.1 157370238 5603502 complement(2184516..2185001) 1 NC_009832.1 PFAM: protein of unknown function DUF336; KEGG: yen:YE1367 hypothetical protein; hypothetical protein 2185001 5603502 Spro_1996 Serratia proteamaculans 568 hypothetical protein YP_001478227.1 2184516 R 399741 CDS YP_001478228.1 157370239 5603494 2185202..2186302 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: yen:YE2425 putative inner membrane protein; diguanylate cyclase 2186302 5603494 Spro_1997 Serratia proteamaculans 568 diguanylate cyclase YP_001478228.1 2185202 D 399741 CDS YP_001478229.1 157370240 5603495 complement(2186335..2189865) 1 NC_009832.1 KEGG: yen:YE1709 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 2189865 5603495 Spro_1998 Serratia proteamaculans 568 transcription-repair coupling factor YP_001478229.1 2186335 R 399741 CDS YP_001478230.1 157370241 5603496 complement(2189969..2190952) 1 NC_009832.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pol:Bpro_3215 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 2190952 5603496 Spro_1999 Serratia proteamaculans 568 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001478230.1 2189969 R 399741 CDS YP_001478231.1 157370242 5603661 2191027..2191680 1 NC_009832.1 PFAM: YheO domain protein; KEGG: yen:YE3210 hypothetical protein; YheO domain-containing protein 2191680 5603661 Spro_2000 Serratia proteamaculans 568 YheO domain-containing protein YP_001478231.1 2191027 D 399741 CDS YP_001478232.1 157370243 5603662 2191799..2193001 1 NC_009832.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 2193001 5603662 Spro_2001 Serratia proteamaculans 568 outer membrane-specific lipoprotein transporter subunit LolC YP_001478232.1 2191799 D 399741 CDS YP_001478233.1 157370244 5603663 2192994..2193698 1 NC_009832.1 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 2193698 lolD 5603663 lolD Serratia proteamaculans 568 lipoprotein transporter ATP-binding subunit YP_001478233.1 2192994 D 399741 CDS YP_001478234.1 157370245 5602692 2193698..2194945 1 NC_009832.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 2194945 5602692 Spro_2003 Serratia proteamaculans 568 outer membrane-specific lipoprotein transporter subunit LolE YP_001478234.1 2193698 D 399741 CDS YP_001478235.1 157370246 5602693 2195001..2195921 1 NC_009832.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 2195921 5602693 Spro_2004 Serratia proteamaculans 568 N-acetyl-D-glucosamine kinase YP_001478235.1 2195001 D 399741 CDS YP_001478236.1 157370247 5602694 2195933..2196769 1 NC_009832.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2196769 5602694 Spro_2005 Serratia proteamaculans 568 NAD-dependent deacetylase YP_001478236.1 2195933 D 399741 CDS YP_001478237.1 157370248 5603457 2196884..2197597 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: kpn:KPN_04017 putative sugar isomerase; RpiR family transcriptional regulator 2197597 5603457 Spro_2006 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001478237.1 2196884 D 399741 CDS YP_001478238.1 157370249 5603458 complement(2197614..2198999) 1 NC_009832.1 PFAM: glycoside hydrolase family 4; KEGG: kpn:KPN_04016 putative glycoside hydrolase, family 4; glycoside hydrolase family protein 2198999 5603458 Spro_2007 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478238.1 2197614 R 399741 CDS YP_001478239.1 157370250 5603459 complement(2199025..2200584) 1 NC_009832.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: kpn:KPN_04015 phosphotransferase system PTS; PTS system glucose-like transporter subunit IIB 2200584 5603459 Spro_2008 Serratia proteamaculans 568 PTS system glucose-like transporter subunit IIB YP_001478239.1 2199025 R 399741 CDS YP_001478240.1 157370251 5603212 2200946..2202175 1 NC_009832.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2202175 5603212 Spro_2009 Serratia proteamaculans 568 peptidase T YP_001478240.1 2200946 D 399741 CDS YP_001478241.1 157370252 5603213 2202261..2203349 1 NC_009832.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: ecv:APECO1_1289 hypothetical oxidoreductase; hypothetical protein 2203349 5603213 Spro_2010 Serratia proteamaculans 568 hypothetical protein YP_001478241.1 2202261 D 399741 CDS YP_001478242.1 157370253 5603983 complement(2203400..2204521) 1 NC_009832.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: yen:YE1716 hypothetical protein; cupin 4 family protein 2204521 5603983 Spro_2011 Serratia proteamaculans 568 cupin 4 family protein YP_001478242.1 2203400 R 399741 CDS YP_001478243.1 157370254 5603984 complement(2204606..2206063) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PhoQ Sensor domain protein; KEGG: yen:YE1717 sensor protein kinase; sensor protein PhoQ 2206063 5603984 Spro_2012 Serratia proteamaculans 568 sensor protein PhoQ YP_001478243.1 2204606 R 399741 CDS YP_001478244.1 157370255 5603985 complement(2206069..2206740) 1 NC_009832.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2206740 5603985 Spro_2013 Serratia proteamaculans 568 DNA-binding transcriptional regulator PhoP YP_001478244.1 2206069 R 399741 CDS YP_001478245.1 157370256 5607450 complement(2207066..2208346) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: pap:PSPA7_2974 probable cytochrome c precursor; gluconate 2-dehydrogenase 2208346 5607450 Spro_2014 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478245.1 2207066 R 399741 CDS YP_001478246.1 157370257 5607451 complement(2208365..2210143) 1 NC_009832.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: bxe:Bxe_A4095 putative gluconate dehydrogenase; gluconate 2-dehydrogenase 2210143 5607451 Spro_2015 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478246.1 2208365 R 399741 CDS YP_001478247.1 157370258 5607452 complement(2210144..2210860) 1 NC_009832.1 KEGG: bam:Bamb_3645 hypothetical protein; gluconate 2-dehydrogenase 2210860 5607452 Spro_2016 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478247.1 2210144 R 399741 CDS YP_001478248.1 157370259 5607466 2211154..2212671 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: oan:Oant_4139 putative transcriptional regulator, GntR family; transcriptional regulator 2212671 5607466 Spro_2017 Serratia proteamaculans 568 transcriptional regulator YP_001478248.1 2211154 D 399741 CDS YP_001478249.1 157370260 5607467 2212795..2213247 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pcr:Pcryo_0836 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2213247 5607467 Spro_2018 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478249.1 2212795 D 399741 CDS YP_001478250.1 157370261 5607468 2213268..2213969 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE2480 putative acetyltransferase; GCN5-like N-acetyltransferase 2213969 5607468 Spro_2019 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478250.1 2213268 D 399741 CDS YP_001478251.1 157370262 5607456 complement(2214021..2215391) 1 NC_009832.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2215391 5607456 Spro_2020 Serratia proteamaculans 568 adenylosuccinate lyase YP_001478251.1 2214021 R 399741 CDS YP_001478252.1 157370263 5607457 complement(2215414..2216040) 1 NC_009832.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2216040 5607457 Spro_2021 Serratia proteamaculans 568 hypothetical protein YP_001478252.1 2215414 R 399741 CDS YP_001478253.1 157370264 5607458 complement(2216043..2217146) 1 NC_009832.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2217146 mnmA 5607458 mnmA Serratia proteamaculans 568 tRNA-specific 2-thiouridylase MnmA YP_001478253.1 2216043 R 399741 CDS YP_001478254.1 157370265 5607430 complement(2217242..2217688) 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: ypi:YpsIP31758_1613 hydrolase, NUDIX family; NUDIX hydrolase 2217688 5607430 Spro_2023 Serratia proteamaculans 568 NUDIX hydrolase YP_001478254.1 2217242 R 399741 CDS YP_001478255.1 157370266 5607431 complement(2217723..2218259) 1 NC_009832.1 PFAM: pseudouridine synthase; KEGG: yen:YE1724 putative pseudouridine synthase; pseudouridine synthase 2218259 5607431 Spro_2024 Serratia proteamaculans 568 pseudouridine synthase YP_001478255.1 2217723 R 399741 CDS YP_001478256.1 157370267 5607432 2218482..2219735 1 NC_009832.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2219735 5607432 Spro_2025 Serratia proteamaculans 568 isocitrate dehydrogenase YP_001478256.1 2218482 D 399741 CDS YP_001478257.1 157370268 5607398 2220061..2220918 1 NC_009832.1 hypothetical protein 2220918 5607398 Spro_2026 Serratia proteamaculans 568 hypothetical protein YP_001478257.1 2220061 D 399741 CDS YP_001478258.1 157370269 5607399 2221222..2222529 1 NC_009832.1 KEGG: ava:Ava_2063 hypothetical protein; hypothetical protein 2222529 5607399 Spro_2027 Serratia proteamaculans 568 hypothetical protein YP_001478258.1 2221222 D 399741 CDS YP_001478259.1 157370270 5607400 complement(2223258..2224040) 1 NC_009832.1 PFAM: integrase family protein; KEGG: ecj:JW1126 predicted integrase; integrase family protein 2224040 5607400 Spro_2028 Serratia proteamaculans 568 integrase family protein YP_001478259.1 2223258 R 399741 CDS YP_001478260.1 157370271 5607339 2224111..2224389 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 2224389 5607339 Spro_2029 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001478260.1 2224111 D 399741 CDS YP_001478261.1 157370272 5607340 2224410..2225261 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 2225261 5607340 Spro_2030 Serratia proteamaculans 568 Integrase catalytic subunit YP_001478261.1 2224410 D 399741 CDS YP_001478262.1 157370273 5607341 complement(2225496..2226161) 1 NC_009832.1 hypothetical protein 2226161 5607341 Spro_2031 Serratia proteamaculans 568 hypothetical protein YP_001478262.1 2225496 R 399741 CDS YP_001478263.1 157370274 5607310 complement(2226145..2226987) 1 NC_009832.1 KEGG: ent:Ent638_2623 hypothetical protein; hypothetical protein 2226987 5607310 Spro_2032 Serratia proteamaculans 568 hypothetical protein YP_001478263.1 2226145 R 399741 CDS YP_001478264.1 157370275 5607311 complement(2229342..2230190) 1 NC_009832.1 KEGG: sit:TM1040_1659 hypothetical protein; hypothetical protein 2230190 5607311 Spro_2033 Serratia proteamaculans 568 hypothetical protein YP_001478264.1 2229342 R 399741 CDS YP_001478265.1 157370276 5607312 complement(2230635..2231279) 1 NC_009832.1 PFAM: peptidase S24 and S26 domain protein; KEGG: ent:Ent638_2620 putative phage repressor; putative phage repressor 2231279 5607312 Spro_2034 Serratia proteamaculans 568 putative phage repressor YP_001478265.1 2230635 R 399741 CDS YP_001478266.1 157370277 5607283 2231371..2231598 1 NC_009832.1 KEGG: plu:plu3476 hypothetical protein; hypothetical protein 2231598 5607283 Spro_2035 Serratia proteamaculans 568 hypothetical protein YP_001478266.1 2231371 D 399741 CDS YP_001478267.1 157370278 5607284 2231614..2231901 1 NC_009832.1 KEGG: sec:SC0986 Gifsy-2 prophage lysozyme; Phage-related lysozyme (muraminidase)-like protein 2231901 5607284 Spro_2036 Serratia proteamaculans 568 Phage-related lysozyme (muraminidase)-like protein YP_001478267.1 2231614 D 399741 CDS YP_001478268.1 157370279 5607285 2231898..2232281 1 NC_009832.1 hypothetical protein 2232281 5607285 Spro_2037 Serratia proteamaculans 568 hypothetical protein YP_001478268.1 2231898 D 399741 CDS YP_001478269.1 157370280 5607239 2232949..2233230 1 NC_009832.1 hypothetical protein 2233230 5607239 Spro_2038 Serratia proteamaculans 568 hypothetical protein YP_001478269.1 2232949 D 399741 CDS YP_001478270.1 157370281 5607240 2233913..2234320 1 NC_009832.1 hypothetical protein 2234320 5607240 Spro_2039 Serratia proteamaculans 568 hypothetical protein YP_001478270.1 2233913 D 399741 CDS YP_001478271.1 157370282 5607241 2234415..2234675 1 NC_009832.1 PFAM: DNA polymerase II beta subunit; KEGG: plu:plu2690 DNA polymerase III, theta subunit; DNA polymerase II subunit beta 2234675 5607241 Spro_2040 Serratia proteamaculans 568 DNA polymerase II subunit beta YP_001478271.1 2234415 D 399741 CDS YP_001478272.1 157370283 5607167 2235519..2236073 1 NC_009832.1 PFAM: DNA packaging Nu1; KEGG: ssn:SSON_2431 bacteriophage DNA packaging protein; DNA packaging Nu1 2236073 5607167 Spro_2041 Serratia proteamaculans 568 DNA packaging Nu1 YP_001478272.1 2235519 D 399741 CDS YP_001478273.1 157370284 5607168 2236048..2237973 1 NC_009832.1 PFAM: terminase GpA; KEGG: ecs:ECs1630 terminase large subunit; terminase GpA 2237973 5607168 Spro_2042 Serratia proteamaculans 568 terminase GpA YP_001478273.1 2236048 D 399741 CDS YP_001478274.1 157370285 5607169 2238059..2238805 1 NC_009832.1 KEGG: tcx:Tcr_0695 phage tail sheath protein; Phage tail sheath protein FI-like protein 2238805 5607169 Spro_2043 Serratia proteamaculans 568 Phage tail sheath protein FI-like protein YP_001478274.1 2238059 D 399741 CDS YP_001478275.1 157370286 5607165 2238805..2239263 1 NC_009832.1 PFAM: P2 GpU family protein; KEGG: syf:Synpcc7942_0751 hypothetical protein; P2 GpU family protein 2239263 5607165 Spro_2044 Serratia proteamaculans 568 P2 GpU family protein YP_001478275.1 2238805 D 399741 CDS YP_001478276.1 157370287 5607166 2239457..2240578 1 NC_009832.1 PFAM: late control D family protein; KEGG: sdy:SDY_1080 hypothetical protein; late control D family protein 2240578 5607166 Spro_2045 Serratia proteamaculans 568 late control D family protein YP_001478276.1 2239457 D 399741 CDS YP_001478277.1 157370288 5607152 complement(2240666..2241127) 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: ent:Ent638_0915 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 2241127 5607152 Spro_2046 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001478277.1 2240666 R 399741 CDS YP_001478278.1 157370289 5607153 2241244..2242188 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: stt:t1016 putative membrane protein; hypothetical protein 2242188 5607153 Spro_2047 Serratia proteamaculans 568 hypothetical protein YP_001478278.1 2241244 D 399741 CDS YP_001478279.1 157370290 5607154 2243010..2243162 1 NC_009832.1 KEGG: yen:YE1725 isocitrate dehydrogenase; isocitrate dehydrogenase 2243162 5607154 Spro_2048 Serratia proteamaculans 568 isocitrate dehydrogenase YP_001478279.1 2243010 D 399741 CDS YP_001478280.1 157370291 5607105 2243251..2243691 1 NC_009832.1 KEGG: kpn:KPN_00743 cell envelope integrity inner membrane protein TolA; colicin uptake-like protein 2243691 5607105 Spro_2049 Serratia proteamaculans 568 colicin uptake-like protein YP_001478280.1 2243251 D 399741 CDS YP_001478281.1 157370292 5607106 complement(2243817..2244938) 1 NC_009832.1 PFAM: protein of unknown function UPF0118; KEGG: eca:ECA0120 hypothetical protein; hypothetical protein 2244938 5607106 Spro_2050 Serratia proteamaculans 568 hypothetical protein YP_001478281.1 2243817 R 399741 CDS YP_001478282.1 157370293 5607107 complement(2245208..2245426) 1 NC_009832.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: pen:PSEEN1931 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2245426 5607107 Spro_2051 Serratia proteamaculans 568 4-oxalocrotonate tautomerase YP_001478282.1 2245208 R 399741 CDS YP_001478283.1 157370294 5607093 complement(2245444..2246190) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3414 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2246190 5607093 Spro_2052 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001478283.1 2245444 R 399741 CDS YP_001478284.1 157370295 5607094 2246509..2247546 1 NC_009832.1 PFAM: regulatory protein LacI; KEGG: kpn:KPN_01795 putative periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 2247546 5607094 Spro_2053 Serratia proteamaculans 568 LacI family transcription regulator YP_001478284.1 2246509 D 399741 CDS YP_001478285.1 157370296 5607095 2247752..2248678 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_01796 putative epimerase/isomerase; xylose isomerase domain-containing protein 2248678 5607095 Spro_2054 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001478285.1 2247752 D 399741 CDS YP_001478286.1 157370297 5607053 2248693..2249865 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kpn:KPN_01797 hypothetical oxidoreductase; oxidoreductase domain-containing protein 2249865 5607053 Spro_2055 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001478286.1 2248693 D 399741 CDS YP_001478287.1 157370298 5607054 complement(2249893..2250243) 1 NC_009832.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: swi:Swit_2158 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 2250243 5607054 Spro_2056 Serratia proteamaculans 568 glutathione-dependent formaldehyde-activating protein YP_001478287.1 2249893 R 399741 CDS YP_001478288.1 157370299 5607055 2250418..2250627 1 NC_009832.1 hypothetical protein 2250627 5607055 Spro_2057 Serratia proteamaculans 568 hypothetical protein YP_001478288.1 2250418 D 399741 CDS YP_001478289.1 157370300 5606950 2250962..2251705 1 NC_009832.1 PFAM: Domain of unknown function DUF1835; KEGG: bat:BAS2610 hypothetical protein; hypothetical protein 2251705 5606950 Spro_2058 Serratia proteamaculans 568 hypothetical protein YP_001478289.1 2250962 D 399741 CDS YP_001478290.1 157370301 5606951 2251832..2252476 1 NC_009832.1 PFAM: pentapeptide repeat protein; KEGG: ppr:PBPRB0125 hypothetical protein; pentapeptide repeat-containing protein 2252476 5606951 Spro_2059 Serratia proteamaculans 568 pentapeptide repeat-containing protein YP_001478290.1 2251832 D 399741 CDS YP_001478291.1 157370302 5606952 complement(2252509..2252907) 1 NC_009832.1 hypothetical protein 2252907 5606952 Spro_2060 Serratia proteamaculans 568 hypothetical protein YP_001478291.1 2252509 R 399741 CDS YP_001478292.1 157370303 5606899 2253352..2253564 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: eca:ECA2471 cold shock protein; cold-shock DNA-binding domain-containing protein 2253564 5606899 Spro_2061 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001478292.1 2253352 D 399741 CDS YP_001478293.1 157370304 5606900 complement(2253968..2254648) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: bbr:BB1080 putative isochorismatase; isochorismatase hydrolase 2254648 5606900 Spro_2062 Serratia proteamaculans 568 isochorismatase hydrolase YP_001478293.1 2253968 R 399741 CDS YP_001478294.1 157370305 5606901 2255097..2255852 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vco:VC0395_A1193 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2255852 5606901 Spro_2063 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001478294.1 2255097 D 399741 CDS YP_001478295.1 157370306 5606737 complement(2255900..2257180) 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; KEGG: kpn:KPN_01017 probable oxidoreductase; FAD dependent oxidoreductase 2257180 5606737 Spro_2064 Serratia proteamaculans 568 FAD dependent oxidoreductase YP_001478295.1 2255900 R 399741 CDS YP_001478296.1 157370307 5606738 complement(2257192..2258688) 1 NC_009832.1 catalyzes the formation of gamma-glutamyl-gamma-aminobutyrate from Gamma-glutamyl-gamma-aminobutyraldehyde; involved in putrescine degradation; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase 2258688 5606738 Spro_2065 Serratia proteamaculans 568 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase YP_001478296.1 2257192 R 399741 CDS YP_001478297.1 157370308 5606739 complement(2258704..2259261) 1 NC_009832.1 regulates genes involved in putrescine degradation; DNA-binding transcriptional repressor PuuR 2259261 5606739 Spro_2066 Serratia proteamaculans 568 DNA-binding transcriptional repressor PuuR YP_001478297.1 2258704 R 399741 CDS YP_001478298.1 157370309 5606686 complement(2259258..2260019) 1 NC_009832.1 catalyzes the degradation of gamma-glutamyl-gamma-aminobutyrate into glutamate and gamma-aminobutyrate; gamma-glutamyl-gamma-aminobutyrate hydrolase 2260019 puuD 5606686 puuD Serratia proteamaculans 568 gamma-glutamyl-gamma-aminobutyrate hydrolase YP_001478298.1 2259258 R 399741 CDS YP_001478299.1 157370310 5606687 2260259..2261677 1 NC_009832.1 PFAM: glutamine synthetase catalytic region; KEGG: ecs:ECs1874 putative glutamine synthetase; glutamate--putrescine ligase 2261677 5606687 Spro_2068 Serratia proteamaculans 568 glutamate--putrescine ligase YP_001478299.1 2260259 D 399741 CDS YP_001478300.1 157370311 5606688 2261995..2263365 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: kpn:KPN_01022 putative amino acid/amine transport protein; amino acid permease-associated protein 2263365 5606688 Spro_2069 Serratia proteamaculans 568 amino acid permease-associated protein YP_001478300.1 2261995 D 399741 CDS YP_001478301.1 157370312 5606659 2263457..2264350 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2056 protein of unknown function DUF6, transmembrane; hypothetical protein 2264350 5606659 Spro_2070 Serratia proteamaculans 568 hypothetical protein YP_001478301.1 2263457 D 399741 CDS YP_001478302.1 157370313 5606660 2264423..2264695 1 NC_009832.1 hypothetical protein 2264695 5606660 Spro_2071 Serratia proteamaculans 568 hypothetical protein YP_001478302.1 2264423 D 399741 CDS YP_001478303.1 157370314 5606661 2265092..2265973 1 NC_009832.1 PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: ecv:APECO1_1599 nucleoside-specific channel-forming protein Tsx; nucleoside-specific channel-forming protein Tsx 2265973 5606661 Spro_2072 Serratia proteamaculans 568 nucleoside-specific channel-forming protein Tsx YP_001478303.1 2265092 D 399741 CDS YP_001478304.1 157370315 5606622 2266669..2267145 1 NC_009832.1 KEGG: kpn:KPN_02024 hypothetical protein; hypothetical protein 2267145 5606622 Spro_2073 Serratia proteamaculans 568 hypothetical protein YP_001478304.1 2266669 D 399741 CDS YP_001478305.1 157370316 5606623 2267259..2267789 1 NC_009832.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 2267789 5606623 Spro_2074 Serratia proteamaculans 568 chorismate mutase YP_001478305.1 2267259 D 399741 CDS YP_001478306.1 157370317 5606624 complement(2267799..2269334) 1 NC_009832.1 PFAM: beta-lactamase; KEGG: oan:Oant_3736 beta-lactamase; beta-lactamase 2269334 5606624 Spro_2075 Serratia proteamaculans 568 beta-lactamase YP_001478306.1 2267799 R 399741 CDS YP_001478307.1 157370318 5606596 complement(2269606..2270409) 1 NC_009832.1 PFAM: N-formylglutamate amidohydrolase; KEGG: yen:YE2462 putative N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 2270409 5606596 Spro_2076 Serratia proteamaculans 568 N-formylglutamate amidohydrolase YP_001478307.1 2269606 R 399741 CDS YP_001478308.1 157370319 5606597 complement(2270406..2271629) 1 NC_009832.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 2271629 5606597 Spro_2077 Serratia proteamaculans 568 imidazolonepropionase YP_001478308.1 2270406 R 399741 CDS YP_001478309.1 157370320 5606598 complement(2271788..2272543) 1 NC_009832.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: yen:YE2460 putative GntR-family transcriptional regulatory protein; histidine utilization repressor 2272543 5606598 Spro_2078 Serratia proteamaculans 568 histidine utilization repressor YP_001478309.1 2271788 R 399741 CDS YP_001478310.1 157370321 5606586 2272721..2274091 1 NC_009832.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2274091 5606586 Spro_2079 Serratia proteamaculans 568 N-formimino-L-glutamate deiminase YP_001478310.1 2272721 D 399741 CDS YP_001478311.1 157370322 5606587 2274091..2274654 1 NC_009832.1 PFAM: protein of unknown function DUF886; KEGG: yen:YE2458 hypothetical protein; hypothetical protein 2274654 5606587 Spro_2080 Serratia proteamaculans 568 hypothetical protein YP_001478311.1 2274091 D 399741 CDS YP_001478312.1 157370323 5606551 2274722..2275723 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_03263 putative bacterial regulatory protein, LacI; LacI family transcription regulator 2275723 5606551 Spro_2081 Serratia proteamaculans 568 LacI family transcription regulator YP_001478312.1 2274722 D 399741 CDS YP_001478313.1 157370324 5606552 complement(2275960..2277402) 1 NC_009832.1 KEGG: sdy:SDY_2558 sucrose hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 2277402 5606552 Spro_2082 Serratia proteamaculans 568 sucrose-6-phosphate hydrolase YP_001478313.1 2275960 R 399741 CDS YP_001478314.1 157370325 5606553 complement(2277399..2278658) 1 NC_009832.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 2278658 lacY 5606553 lacY Serratia proteamaculans 568 galactoside permease YP_001478314.1 2277399 R 399741 CDS YP_001478315.1 157370326 5606533 complement(2278832..2280142) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ent:Ent638_0364 major facilitator superfamily MFS_1; major facilitator transporter 2280142 5606533 Spro_2084 Serratia proteamaculans 568 major facilitator transporter YP_001478315.1 2278832 R 399741 CDS YP_001478316.1 157370327 5606534 complement(2280275..2281573) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: yen:YE1086 putative cytochrome c; gluconate 2-dehydrogenase 2281573 5606534 Spro_2085 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478316.1 2280275 R 399741 CDS YP_001478317.1 157370328 5606535 complement(2281570..2283186) 1 NC_009832.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: har:HEAR2557 glucose dehydrogenase; glucose-methanol-choline oxidoreductase 2283186 5606535 Spro_2086 Serratia proteamaculans 568 glucose-methanol-choline oxidoreductase YP_001478317.1 2281570 R 399741 CDS YP_001478318.1 157370329 5606530 complement(2283179..2283700) 1 NC_009832.1 KEGG: pfo:Pfl_4264 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 2283700 5606530 Spro_2087 Serratia proteamaculans 568 twin-arginine translocation pathway signal YP_001478318.1 2283179 R 399741 CDS YP_001478319.1 157370330 5606531 complement(2283735..2284271) 1 NC_009832.1 PFAM: protein of unknown function DUF336; KEGG: pmy:Pmen_0200 protein of unknown function DUF336; hypothetical protein 2284271 5606531 Spro_2088 Serratia proteamaculans 568 hypothetical protein YP_001478319.1 2283735 R 399741 CDS YP_001478320.1 157370331 5606532 complement(2284343..2285230) 1 NC_009832.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: kpn:KPN_04046 putative dehydrogenase; phosphogluconate dehydrogenase, NAD-binding-like protein 2285230 5606532 Spro_2089 Serratia proteamaculans 568 phosphogluconate dehydrogenase, NAD-binding-like protein YP_001478320.1 2284343 R 399741 CDS YP_001478321.1 157370332 5606505 complement(2285244..2286335) 1 NC_009832.1 PFAM: protein of unknown function DUF453; KEGG: kpn:KPN_04047 hypothetical protein; hypothetical protein 2286335 5606505 Spro_2090 Serratia proteamaculans 568 hypothetical protein YP_001478321.1 2285244 R 399741 CDS YP_001478322.1 157370333 5606506 complement(2286337..2287050) 1 NC_009832.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: ppf:Pput_3204 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; hypothetical protein 2287050 5606506 Spro_2091 Serratia proteamaculans 568 hypothetical protein YP_001478322.1 2286337 R 399741 CDS YP_001478323.1 157370334 5606507 complement(2287047..2287790) 1 NC_009832.1 PFAM: LmbE family protein; KEGG: ppf:Pput_1362 LmbE family protein; LmbE family protein 2287790 5606507 Spro_2092 Serratia proteamaculans 568 LmbE family protein YP_001478323.1 2287047 R 399741 CDS YP_001478324.1 157370335 5606484 2287916..2289142 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_2516 transcriptional regulator, LysR family; LysR family transcriptional regulator 2289142 5606484 Spro_2093 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478324.1 2287916 D 399741 CDS YP_001478325.1 157370336 5606485 complement(2289146..2289574) 1 NC_009832.1 KEGG: pen:PSEEN2021 3-dehydroquinate dehydratase, type II; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 2289574 5606485 Spro_2094 Serratia proteamaculans 568 3-dehydroquinate dehydratase YP_001478325.1 2289146 R 399741 CDS YP_001478326.1 157370337 5606486 complement(2289577..2290416) 1 NC_009832.1 PFAM: amidohydrolase 2; KEGG: ppf:Pput_2198 amidohydrolase 2; amidohydrolase 2 2290416 5606486 Spro_2095 Serratia proteamaculans 568 amidohydrolase 2 YP_001478326.1 2289577 R 399741 CDS YP_001478327.1 157370338 5606473 complement(2290413..2291675) 1 NC_009832.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase 2291675 5606473 Spro_2096 Serratia proteamaculans 568 protocatechuate 4,5-dioxygenase YP_001478327.1 2290413 R 399741 CDS YP_001478328.1 157370339 5606474 complement(2291700..2293079) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_04052 putative general substrate transporter; major facilitator transporter 2293079 5606474 Spro_2097 Serratia proteamaculans 568 major facilitator transporter YP_001478328.1 2291700 R 399741 CDS YP_001478329.1 157370340 5606475 complement(2293423..2295042) 1 NC_009832.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 2295042 5606475 Spro_2098 Serratia proteamaculans 568 phosphoenolpyruvate carboxykinase YP_001478329.1 2293423 R 399741 CDS YP_001478330.1 157370341 5606452 2295530..2296873 1 NC_009832.1 PFAM: Citrate carrier protein; KEGG: yen:YE2507 putative citrate/sodium-family symporter; citrate carrier protein 2296873 5606452 Spro_2099 Serratia proteamaculans 568 citrate carrier protein YP_001478330.1 2295530 D 399741 CDS YP_001478331.1 157370342 5606453 2297090..2297221 1 NC_009832.1 hypothetical protein 2297221 5606453 Spro_2100 Serratia proteamaculans 568 hypothetical protein YP_001478331.1 2297090 D 399741 CDS YP_001478332.1 157370343 5606454 complement(2297372..2297581) 1 NC_009832.1 hypothetical protein 2297581 5606454 Spro_2101 Serratia proteamaculans 568 hypothetical protein YP_001478332.1 2297372 R 399741 CDS YP_001478333.1 157370344 5606366 2297747..2297911 1 NC_009832.1 hypothetical protein 2297911 5606366 Spro_2102 Serratia proteamaculans 568 hypothetical protein YP_001478333.1 2297747 D 399741 CDS YP_001478334.1 157370345 5606367 complement(2298101..2298208) 1 NC_009832.1 hypothetical protein 2298208 5606367 Spro_2103 Serratia proteamaculans 568 hypothetical protein YP_001478334.1 2298101 R 399741 CDS YP_001478335.1 157370346 5606368 2298537..2298929 1 NC_009832.1 PFAM: protein of unknown function DUF437; KEGG: yen:YE1853 hypothetical protein; hypothetical protein 2298929 5606368 Spro_2104 Serratia proteamaculans 568 hypothetical protein YP_001478335.1 2298537 D 399741 CDS YP_001478336.1 157370347 5606363 2298931..2299533 1 NC_009832.1 KEGG: rle:RL2800 hypothetical protein; hypothetical protein 2299533 5606363 Spro_2105 Serratia proteamaculans 568 hypothetical protein YP_001478336.1 2298931 D 399741 CDS YP_001478337.1 157370348 5606364 complement(2299589..2299828) 1 NC_009832.1 PFAM: protein of unknown function DUF1480; KEGG: ypi:YpsIP31758_1660 hypothetical protein; hypothetical protein 2299828 5606364 Spro_2106 Serratia proteamaculans 568 hypothetical protein YP_001478337.1 2299589 R 399741 CDS YP_001478338.1 157370349 5606365 complement(2299966..2300898) 1 NC_009832.1 PFAM: Spore coat U domain protein; KEGG: yen:YE1856 hypothetical protein; spore coat U domain-containing protein 2300898 5606365 Spro_2107 Serratia proteamaculans 568 spore coat U domain-containing protein YP_001478338.1 2299966 R 399741 CDS YP_001478339.1 157370350 5606280 complement(2300917..2303265) 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: yen:YE1857 probable outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 2303265 5606280 Spro_2108 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001478339.1 2300917 R 399741 CDS YP_001478340.1 157370351 5606281 complement(2303417..2304181) 1 NC_009832.1 KEGG: yen:YE1858 putative chaperone protein; putative chaperone protein 2304181 5606281 Spro_2109 Serratia proteamaculans 568 putative chaperone protein YP_001478340.1 2303417 R 399741 CDS YP_001478341.1 157370352 5606282 complement(2304205..2304759) 1 NC_009832.1 PFAM: Spore coat U domain protein; KEGG: yen:YE1859 hypothetical protein; spore coat U domain-containing protein 2304759 5606282 Spro_2110 Serratia proteamaculans 568 spore coat U domain-containing protein YP_001478341.1 2304205 R 399741 CDS YP_001478342.1 157370353 5606267 complement(2304759..2305262) 1 NC_009832.1 PFAM: Spore coat U domain protein; KEGG: yps:YPTB2382 hypothetical protein; spore coat U domain-containing protein 2305262 5606267 Spro_2111 Serratia proteamaculans 568 spore coat U domain-containing protein YP_001478342.1 2304759 R 399741 CDS YP_001478343.1 157370354 5606268 complement(2305265..2305804) 1 NC_009832.1 PFAM: Spore coat U domain protein; KEGG: yen:YE1861 hypothetical protein; spore coat U domain-containing protein 2305804 5606268 Spro_2112 Serratia proteamaculans 568 spore coat U domain-containing protein YP_001478343.1 2305265 R 399741 CDS YP_001478344.1 157370355 5606269 complement(2306082..2307593) 1 NC_009832.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2307593 yebU 5606269 yebU Serratia proteamaculans 568 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_001478344.1 2306082 R 399741 CDS YP_001478345.1 157370356 5606158 complement(2310221..2311471) 1 NC_009832.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: yen:YE1865 hypothetical protein; PqiA family integral membrane protein 2311471 5606158 Spro_2116 Serratia proteamaculans 568 PqiA family integral membrane protein YP_001478345.1 2310221 R 399741 CDS YP_001478346.1 157370357 5606135 2311715..2312212 1 NC_009832.1 PFAM: GAF domain protein; KEGG: ypi:YpsIP31758_1670 hypothetical protein; putative GAF sensor protein 2312212 5606135 Spro_2117 Serratia proteamaculans 568 putative GAF sensor protein YP_001478346.1 2311715 D 399741 CDS YP_001478347.1 157370358 5606136 2312308..2313018 1 NC_009832.1 affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2313018 5606136 Spro_2118 Serratia proteamaculans 568 putative solute/DNA competence effector YP_001478347.1 2312308 D 399741 CDS YP_001478348.1 157370359 5606137 2313038..2315074 1 NC_009832.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2315074 5606137 Spro_2119 Serratia proteamaculans 568 carboxy-terminal protease YP_001478348.1 2313038 D 399741 CDS YP_001478349.1 157370360 5606132 2315375..2316253 1 NC_009832.1 putative metalloprotease; heat shock protein HtpX 2316253 5606132 Spro_2120 Serratia proteamaculans 568 heat shock protein HtpX YP_001478349.1 2315375 D 399741 CDS YP_001478350.1 157370361 5606133 complement(2316302..2317744) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1875 putative transport protein; major facilitator transporter 2317744 5606133 Spro_2121 Serratia proteamaculans 568 major facilitator transporter YP_001478350.1 2316302 R 399741 CDS YP_001478351.1 157370362 5606134 2317924..2318715 1 NC_009832.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: yen:YE1877 IclR-family transcriptional regulatory protein; IclR family transcriptional regulator 2318715 5606134 Spro_2122 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001478351.1 2317924 D 399741 CDS YP_001478352.1 157370363 5606127 complement(2318847..2320238) 1 NC_009832.1 PFAM: sodium:dicarboxylate symporter; KEGG: yen:YE1879 putative transport protein; sodium:dicarboxylate symporter 2320238 5606127 Spro_2123 Serratia proteamaculans 568 sodium:dicarboxylate symporter YP_001478352.1 2318847 R 399741 CDS YP_001478353.1 157370364 5606128 complement(2320423..2320971) 1 NC_009832.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: yen:YE1880 hypothetical protein; hypothetical protein 2320971 5606128 Spro_2124 Serratia proteamaculans 568 hypothetical protein YP_001478353.1 2320423 R 399741 CDS YP_001478354.1 157370365 5606129 complement(2321367..2322032) 1 NC_009832.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 2322032 5606129 Spro_2125 Serratia proteamaculans 568 2-deoxyglucose-6-phosphatase YP_001478354.1 2321367 R 399741 CDS YP_001478355.1 157370366 5606121 complement(2322098..2323384) 1 NC_009832.1 KEGG: xau:Xaut_4145 conserved hypothetical membrane-bound protease; membrane-bound protease 2323384 5606121 Spro_2126 Serratia proteamaculans 568 membrane-bound protease YP_001478355.1 2322098 R 399741 CDS YP_001478356.1 157370367 5606122 2323580..2324140 1 NC_009832.1 KEGG: yen:YE1891 putative yfeABCD locus regulator; putative yfeABCD locus regulator 2324140 5606122 Spro_2127 Serratia proteamaculans 568 putative yfeABCD locus regulator YP_001478356.1 2323580 D 399741 CDS YP_001478357.1 157370368 5606123 complement(2324181..2325050) 1 NC_009832.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: yen:YE1896 hypothetical protein; fructosamine kinase 2325050 5606123 Spro_2128 Serratia proteamaculans 568 fructosamine kinase YP_001478357.1 2324181 R 399741 CDS YP_001478358.1 157370369 5606106 2325315..2325764 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: plu:plu3509 hypothetical protein; GCN5-like N-acetyltransferase 2325764 5606106 Spro_2129 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478358.1 2325315 D 399741 CDS YP_001478359.1 157370370 5606107 complement(2325802..2326662) 1 NC_009832.1 PFAM: ABC-3 protein; KEGG: yen:YE1897 chelated iron transport system membrane protein; ABC-3 protein 2326662 5606107 Spro_2130 Serratia proteamaculans 568 ABC-3 protein YP_001478359.1 2325802 R 399741 CDS YP_001478360.1 157370371 5606108 complement(2326662..2327522) 1 NC_009832.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: ypi:YpsIP31758_1703 chelated iron ABC transporter, permease protein YfeC; ABC-3 protein 2327522 5606108 Spro_2131 Serratia proteamaculans 568 ABC-3 protein YP_001478360.1 2326662 R 399741 CDS YP_001478361.1 157370372 5606097 complement(2327522..2328412) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1899 ATP-binding transport protein; ABC transporter-like protein 2328412 5606097 Spro_2132 Serratia proteamaculans 568 ABC transporter-like protein YP_001478361.1 2327522 R 399741 CDS YP_001478362.1 157370373 5606098 complement(2328409..2329353) 1 NC_009832.1 PFAM: periplasmic solute binding protein; KEGG: eca:ECA2392 periplasmic chelated iron-binding protein; periplasmic solute binding protein 2329353 5606098 Spro_2133 Serratia proteamaculans 568 periplasmic solute binding protein YP_001478362.1 2328409 R 399741 CDS YP_001478363.1 157370374 5606099 complement(2329485..2329784) 1 NC_009832.1 KEGG: kpn:KPN_02184 hypothetical protein; hypothetical protein 2329784 5606099 Spro_2134 Serratia proteamaculans 568 hypothetical protein YP_001478363.1 2329485 R 399741 CDS YP_001478364.1 157370375 5606027 2329858..2330559 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: yps:YPTB2346 putative membrane-bound lytic murein transglycosylase; lytic transglycosylase 2330559 5606027 Spro_2135 Serratia proteamaculans 568 lytic transglycosylase YP_001478364.1 2329858 D 399741 CDS YP_001478365.1 157370376 5606028 2330857..2331594 1 NC_009832.1 KEGG: kpn:KPN_02084 hypothetical protein; gluconate 2-dehydrogenase 2331594 5606028 Spro_2136 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478365.1 2330857 D 399741 CDS YP_001478366.1 157370377 5606029 2331597..2333378 1 NC_009832.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: kpn:KPN_02083 monooxygenase, FAD-binding; glucose-methanol-choline oxidoreductase; gluconate 2-dehydrogenase 2333378 5606029 Spro_2137 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478366.1 2331597 D 399741 CDS YP_001478367.1 157370378 5606024 2333391..2334710 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: kpn:KPN_02082 gluconate dehydrogenase cytochrome c subunit, putative; gluconate 2-dehydrogenase 2334710 5606024 Spro_2138 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478367.1 2333391 D 399741 CDS YP_001478368.1 157370379 5606025 2334971..2336254 1 NC_009832.1 KEGG: asa:ASA_3891 serine transporter; serine transporter 2336254 5606025 Spro_2139 Serratia proteamaculans 568 serine transporter YP_001478368.1 2334971 D 399741 CDS YP_001478369.1 157370380 5606026 2336347..2337531 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: eca:ECA3241 ABC transporter, substrate binding protein; periplasmic binding protein 2337531 5606026 Spro_2140 Serratia proteamaculans 568 periplasmic binding protein YP_001478369.1 2336347 D 399741 CDS YP_001478370.1 157370381 5605967 complement(2337567..2338256) 1 NC_009832.1 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 2338256 5605967 Spro_2141 Serratia proteamaculans 568 multiple drug resistance protein MarC YP_001478370.1 2337567 R 399741 CDS YP_001478371.1 157370382 5605968 complement(2338384..2338743) 1 NC_009832.1 hypothetical protein 2338743 5605968 Spro_2142 Serratia proteamaculans 568 hypothetical protein YP_001478371.1 2338384 R 399741 CDS YP_001478372.1 157370383 5605969 2338892..2339518 1 NC_009832.1 KEGG: plu:plu2637 hypothetical protein; hypothetical protein 2339518 5605969 Spro_2143 Serratia proteamaculans 568 hypothetical protein YP_001478372.1 2338892 D 399741 CDS YP_001478373.1 157370384 5605934 2339740..2341668 1 NC_009832.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2341668 5605934 Spro_2144 Serratia proteamaculans 568 threonyl-tRNA synthetase YP_001478373.1 2339740 D 399741 CDS YP_001478374.1 157370385 5605935 2341873..2342223 1 NC_009832.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2342223 5605935 Spro_2145 Serratia proteamaculans 568 translation initiation factor IF-3 YP_001478374.1 2341873 D 399741 CDS YP_001478375.1 157370386 5605936 2342322..2342519 1 NC_009832.1 PFAM: ribosomal protein L35; KEGG: yen:YE1914 50S ribosomal protein L35; 50S ribosomal protein L35 2342519 rpmI 5605936 rpmI Serratia proteamaculans 568 50S ribosomal protein L35 YP_001478375.1 2342322 D 399741 CDS YP_001478376.1 157370387 5605923 2342563..2342919 1 NC_009832.1 TIGRFAM: ribosomal protein L20; KEGG: ypi:YpsIP31758_1715 ribosomal protein L20; 50S ribosomal protein L20 2342919 5605923 Spro_2147 Serratia proteamaculans 568 50S ribosomal protein L20 YP_001478376.1 2342563 D 399741 CDS YP_001478377.1 157370388 5605924 2343281..2344264 1 NC_009832.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2344264 pheS 5605924 pheS Serratia proteamaculans 568 phenylalanyl-tRNA synthetase subunit alpha YP_001478377.1 2343281 D 399741 CDS YP_001478378.1 157370389 5605925 2344279..2346666 1 NC_009832.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2346666 pheT 5605925 pheT Serratia proteamaculans 568 phenylalanyl-tRNA synthetase subunit beta YP_001478378.1 2344279 D 399741 CDS YP_001478379.1 157370390 5605913 2346671..2346967 1 NC_009832.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2346967 ihfA 5605913 ihfA Serratia proteamaculans 568 integration host factor subunit alpha YP_001478379.1 2346671 D 399741 CDS YP_001478380.1 157370391 5605914 2347370..2348377 1 NC_009832.1 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 2348377 5605914 Spro_2151 Serratia proteamaculans 568 vtamin B12-transporter permease YP_001478380.1 2347370 D 399741 CDS YP_001478381.1 157370392 5605910 2348419..2348970 1 NC_009832.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; putative glutathione peroxidase 2348970 btuE 5605910 btuE Serratia proteamaculans 568 putative glutathione peroxidase YP_001478381.1 2348419 D 399741 CDS YP_001478382.1 157370393 5605911 2348996..2349751 1 NC_009832.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase 2349751 5605911 Spro_2153 Serratia proteamaculans 568 vitamin B12-transporter ATPase YP_001478382.1 2348996 D 399741 CDS YP_001478383.1 157370394 5605912 2350152..2351306 1 NC_009832.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2351306 5605912 Spro_2154 Serratia proteamaculans 568 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_001478383.1 2350152 D 399741 CDS YP_001478384.1 157370395 5605901 2351293..2352273 1 NC_009832.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2352273 5605901 Spro_2155 Serratia proteamaculans 568 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_001478384.1 2351293 D 399741 CDS YP_001478385.1 157370396 5605902 2352273..2354255 1 NC_009832.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2354255 5605902 Spro_2156 Serratia proteamaculans 568 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_001478385.1 2352273 D 399741 CDS YP_001478386.1 157370397 5605903 2354252..2355157 1 NC_009832.1 PFAM: polysaccharide deacetylase; KEGG: yen:YE2189 hypothetical protein; polysaccharide deacetylase 2355157 5605903 Spro_2157 Serratia proteamaculans 568 polysaccharide deacetylase YP_001478386.1 2354252 D 399741 CDS YP_001478387.1 157370398 5605898 2355154..2356821 1 NC_009832.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 2356821 arnT 5605898 arnT Serratia proteamaculans 568 4-amino-4-deoxy-L-arabinose transferase YP_001478387.1 2355154 D 399741 CDS YP_001478388.1 157370399 5605899 2356818..2357165 1 NC_009832.1 KEGG: yen:YE2187 hypothetical protein; hypothetical protein 2357165 5605899 Spro_2159 Serratia proteamaculans 568 hypothetical protein YP_001478388.1 2356818 D 399741 CDS YP_001478389.1 157370400 5605900 2357162..2357554 1 NC_009832.1 KEGG: ypi:YpsIP31758_1731 hypothetical protein; hypothetical protein 2357554 5605900 Spro_2160 Serratia proteamaculans 568 hypothetical protein YP_001478389.1 2357162 D 399741 CDS YP_001478390.1 157370401 5605880 2357728..2358192 1 NC_009832.1 PFAM: NLP/P60 protein; KEGG: yen:YE2185 putative lipoprotein; NLP/P60 protein 2358192 5605880 Spro_2161 Serratia proteamaculans 568 NLP/P60 protein YP_001478390.1 2357728 D 399741 CDS YP_001478391.1 157370402 5605881 2358250..2359263 1 NC_009832.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A 2359263 lplA 5605881 lplA Serratia proteamaculans 568 lipoate-protein ligase A YP_001478391.1 2358250 D 399741 CDS YP_001478392.1 157370403 5605882 2359817..2360554 1 NC_009832.1 PFAM: EAL domain protein; KEGG: eca:ECA1841 hypothetical protein; diguanylate phosphodiesterase 2360554 5605882 Spro_2163 Serratia proteamaculans 568 diguanylate phosphodiesterase YP_001478392.1 2359817 D 399741 CDS YP_001478393.1 157370404 5605860 2360809..2362251 1 NC_009832.1 PFAM: protein of unknown function UPF0061; KEGG: ypi:YpsIP31758_1734 hypothetical protein; hypothetical protein 2362251 5605860 Spro_2164 Serratia proteamaculans 568 hypothetical protein YP_001478393.1 2360809 D 399741 CDS YP_001478394.1 157370405 5605861 complement(2362300..2363085) 1 NC_009832.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2363085 hmuV 5605861 hmuV Serratia proteamaculans 568 hemin importer ATP-binding subunit YP_001478394.1 2362300 R 399741 CDS YP_001478395.1 157370406 5605862 complement(2363078..2364082) 1 NC_009832.1 PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU; transport system permease 2364082 5605862 Spro_2166 Serratia proteamaculans 568 transport system permease YP_001478395.1 2363078 R 399741 CDS YP_001478396.1 157370407 5605839 complement(2364082..2364912) 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: ypi:YpsIP31758_3803 hemin ABC transporter, periplasmic hemin-binding protein; periplasmic binding protein 2364912 5605839 Spro_2167 Serratia proteamaculans 568 periplasmic binding protein YP_001478396.1 2364082 R 399741 CDS YP_001478397.1 157370408 5605840 complement(2364909..2365943) 1 NC_009832.1 PFAM: Haemin-degrading family protein; KEGG: yen:YE0330 hemin transport protein; hemin-degrading family protein 2365943 5605840 Spro_2168 Serratia proteamaculans 568 hemin-degrading family protein YP_001478397.1 2364909 R 399741 CDS YP_001478398.1 157370409 5605841 complement(2366007..2368091) 1 NC_009832.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE0331 hemin receptor precursor; TonB-dependent heme/hemoglobin receptor family protein 2368091 5605841 Spro_2169 Serratia proteamaculans 568 TonB-dependent heme/hemoglobin receptor family protein YP_001478398.1 2366007 R 399741 CDS YP_001478399.1 157370410 5605830 complement(2368185..2368370) 1 NC_009832.1 KEGG: yen:YE0332 hemin uptake protein; hypothetical protein 2368370 5605830 Spro_2170 Serratia proteamaculans 568 hypothetical protein YP_001478399.1 2368185 R 399741 CDS YP_001478400.1 157370411 5605831 complement(2368539..2369024) 1 NC_009832.1 PFAM: glutathione peroxidase; KEGG: pae:PA2826 probable glutathione peroxidase; glutathione peroxidase 2369024 5605831 Spro_2171 Serratia proteamaculans 568 glutathione peroxidase YP_001478400.1 2368539 R 399741 CDS YP_001478401.1 157370412 5605832 complement(2369126..2370172) 1 NC_009832.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2370172 5605832 Spro_2172 Serratia proteamaculans 568 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001478401.1 2369126 R 399741 CDS YP_001478402.1 157370413 5605786 complement(2370367..2371245) 1 NC_009832.1 PFAM: protein of unknown function DUF299; KEGG: yen:YE2177 hypothetical protein; hypothetical protein 2371245 5605786 Spro_2173 Serratia proteamaculans 568 hypothetical protein YP_001478402.1 2370367 R 399741 CDS YP_001478403.1 157370414 5605787 2371722..2374100 1 NC_009832.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2374100 5605787 Spro_2174 Serratia proteamaculans 568 phosphoenolpyruvate synthase YP_001478403.1 2371722 D 399741 CDS YP_001478404.1 157370415 5605788 complement(2374573..2375673) 1 NC_009832.1 PFAM: protein of unknown function UPF0118; KEGG: ypi:YpsIP31758_1738 hypothetical protein; hypothetical protein 2375673 5605788 Spro_2175 Serratia proteamaculans 568 hypothetical protein YP_001478404.1 2374573 R 399741 CDS YP_001478405.1 157370416 5605772 2375928..2378984 1 NC_009832.1 PFAM: FAD linked oxidase domain protein; KEGG: yen:YE2174 hypothetical protein; FAD linked oxidase domain-containing protein 2378984 5605772 Spro_2176 Serratia proteamaculans 568 FAD linked oxidase domain-containing protein YP_001478405.1 2375928 D 399741 CDS YP_001478406.1 157370417 5605773 2378981..2379397 1 NC_009832.1 PFAM: thioesterase superfamily protein; KEGG: eca:ECA1857 hypothetical protein; thioesterase superfamily protein 2379397 5605773 Spro_2177 Serratia proteamaculans 568 thioesterase superfamily protein YP_001478406.1 2378981 D 399741 CDS YP_001478407.1 157370418 5605774 complement(2379451..2379924) 1 NC_009832.1 KEGG: eca:ECA1858 hypothetical protein; hypothetical protein 2379924 5605774 Spro_2178 Serratia proteamaculans 568 hypothetical protein YP_001478407.1 2379451 R 399741 CDS YP_001478408.1 157370419 5605766 2380411..2380782 1 NC_009832.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein 2380782 sufA 5605766 sufA Serratia proteamaculans 568 iron-sulfur cluster assembly scaffold protein YP_001478408.1 2380411 D 399741 CDS YP_001478409.1 157370420 5605767 2380797..2382293 1 NC_009832.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2382293 5605767 Spro_2180 Serratia proteamaculans 568 cysteine desulfurase activator complex subunit SufB YP_001478409.1 2380797 D 399741 CDS YP_001478410.1 157370421 5605768 2382336..2383082 1 NC_009832.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase 2383082 sufC 5605768 sufC Serratia proteamaculans 568 cysteine desulfurase ATPase YP_001478410.1 2382336 D 399741 CDS YP_001478411.1 157370422 5605751 2383057..2384349 1 NC_009832.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: ypi:YpsIP31758_1744 FeS assembly protein SufD; FeS assembly protein SufD 2384349 5605751 Spro_2182 Serratia proteamaculans 568 FeS assembly protein SufD YP_001478411.1 2383057 D 399741 CDS YP_001478412.1 157370423 5605752 2384346..2385566 1 NC_009832.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ypp:YPDSF_0748 selenocysteine lyase; SufS subfamily cysteine desulfurase 2385566 5605752 Spro_2183 Serratia proteamaculans 568 SufS subfamily cysteine desulfurase YP_001478412.1 2384346 D 399741 CDS YP_001478413.1 157370424 5605753 2385662..2386075 1 NC_009832.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 2386075 5605753 Spro_2184 Serratia proteamaculans 568 cysteine desufuration protein SufE YP_001478413.1 2385662 D 399741 CDS YP_001478414.1 157370425 5605697 2386370..2387383 1 NC_009832.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: yen:YE2166 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2387383 5605697 Spro_2185 Serratia proteamaculans 568 ErfK/YbiS/YcfS/YnhG family protein YP_001478414.1 2386370 D 399741 CDS YP_001478415.1 157370426 5605698 complement(2387524..2387760) 1 NC_009832.1 PFAM: LPP repeat-containing protein; KEGG: yen:YE2165 major outer membrane lipoprotein; LPP repeat-containing protein 2387760 5605698 Spro_2186 Serratia proteamaculans 568 LPP repeat-containing protein YP_001478415.1 2387524 R 399741 CDS YP_001478416.1 157370427 5605694 complement(2388069..2389481) 1 NC_009832.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2389481 5605694 Spro_2187 Serratia proteamaculans 568 pyruvate kinase YP_001478416.1 2388069 R 399741 CDS YP_001478417.1 157370428 5605695 complement(2389884..2390189) 1 NC_009832.1 KEGG: ent:Ent638_3287 cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein 2390189 5605695 Spro_2188 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001478417.1 2389884 R 399741 CDS YP_001478418.1 157370429 5605323 complement(2390797..2392173) 1 NC_009832.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2392173 5605323 Spro_2189 Serratia proteamaculans 568 multidrug efflux protein YP_001478418.1 2390797 R 399741 CDS YP_001478419.1 157370430 5605605 2392416..2393066 1 NC_009832.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2393066 5605605 Spro_2190 Serratia proteamaculans 568 riboflavin synthase subunit alpha YP_001478419.1 2392416 D 399741 CDS YP_001478420.1 157370431 5605606 2393120..2393392 1 NC_009832.1 KEGG: rsq:Rsph17025_0056 hypothetical protein; hypothetical protein 2393392 5605606 Spro_2191 Serratia proteamaculans 568 hypothetical protein YP_001478420.1 2393120 D 399741 CDS YP_001478421.1 157370432 5605607 complement(2393474..2394625) 1 NC_009832.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane fatty acyl phospholipid synthase 2394625 5605607 Spro_2192 Serratia proteamaculans 568 cyclopropane fatty acyl phospholipid synthase YP_001478421.1 2393474 R 399741 CDS YP_001478422.1 157370433 5605578 complement(2394966..2396174) 1 NC_009832.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2396174 5605578 Spro_2193 Serratia proteamaculans 568 inner membrane transport protein YdhC YP_001478422.1 2394966 R 399741 CDS YP_001478423.1 157370434 5605579 2396298..2397242 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypp:YPDSF_0759 LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 2397242 5605579 Spro_2194 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001478423.1 2396298 D 399741 CDS YP_001478424.1 157370435 5605580 complement(2397239..2398264) 1 NC_009832.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 2398264 5605580 Spro_2195 Serratia proteamaculans 568 DNA-binding transcriptional repressor PurR YP_001478424.1 2397239 R 399741 CDS YP_001478425.1 157370436 5605512 complement(2398731..2399309) 1 NC_009832.1 SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase 2399309 5605512 Spro_2196 Serratia proteamaculans 568 superoxide dismutase YP_001478425.1 2398731 R 399741 CDS YP_001478426.1 157370437 5605513 complement(2399503..2400324) 1 NC_009832.1 PFAM: NLP/P60 protein; KEGG: yen:YE2156 hypothetical protein; NLP/P60 protein 2400324 5605513 Spro_2197 Serratia proteamaculans 568 NLP/P60 protein YP_001478426.1 2399503 R 399741 CDS YP_001478427.1 157370438 5605514 2400739..2401086 1 NC_009832.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: ypi:YpsIP31758_1758 monothiol glutaredoxin GrxD; hypothetical protein 2401086 5605514 Spro_2198 Serratia proteamaculans 568 hypothetical protein YP_001478427.1 2400739 D 399741 CDS YP_001478428.1 157370439 5605481 complement(2401156..2401836) 1 NC_009832.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2401836 5605481 Spro_2199 Serratia proteamaculans 568 ribonuclease T YP_001478428.1 2401156 R 399741 CDS YP_001478429.1 157370440 5605482 complement(2401915..2402322) 1 NC_009832.1 KEGG: yen:YE2153 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 2402322 5605482 Spro_2200 Serratia proteamaculans 568 lactoylglutathione lyase YP_001478429.1 2401915 R 399741 CDS YP_001478430.1 157370441 5605483 2402654..2403193 1 NC_009832.1 KEGG: plu:plu3987 unnamed protein product; some similarities with isopentenyl-diphosphate delta-isomerase (IPP isomerase) (isopentenyl pyrophosphate isomerase); TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase, type 1 2403193 5605483 Spro_2201 Serratia proteamaculans 568 isopentenyl-diphosphate delta-isomerase, type 1 YP_001478430.1 2402654 D 399741 CDS YP_001478431.1 157370442 5605374 complement(2403264..2404361) 1 NC_009832.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 2404361 5605374 Spro_2202 Serratia proteamaculans 568 N-ethylmaleimide reductase YP_001478431.1 2403264 R 399741 CDS YP_001478432.1 157370443 5605375 complement(2404447..2405067) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: yen:YE2151 TetR-family transcriptional regulatory protein; TetR family transcriptional regulator 2405067 5605375 Spro_2203 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478432.1 2404447 R 399741 CDS YP_001478433.1 157370444 5605376 complement(2405171..2406808) 1 NC_009832.1 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; putative cell division protein 2406808 5605376 Spro_2204 Serratia proteamaculans 568 putative cell division protein YP_001478433.1 2405171 R 399741 CDS YP_001478434.1 157370445 5605333 complement(2406970..2407611) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: pmy:Pmen_0809 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase 2407611 5605333 Spro_2205 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001478434.1 2406970 R 399741 CDS YP_001478435.1 157370446 5605334 2407753..2408664 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_0810 transcriptional regulator, LysR family; LysR family transcriptional regulator 2408664 5605334 Spro_2206 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478435.1 2407753 D 399741 CDS YP_001478436.1 157370447 5605335 2408686..2408925 1 NC_009832.1 PFAM: protein of unknown function DUF1289; KEGG: yen:YE2149 hypothetical protein; hypothetical protein 2408925 5605335 Spro_2207 Serratia proteamaculans 568 hypothetical protein YP_001478436.1 2408686 D 399741 CDS YP_001478437.1 157370448 5605327 2409025..2409921 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: yen:YE2148 putative aldo/keto reductase; aldo/keto reductase 2409921 5605327 Spro_2208 Serratia proteamaculans 568 aldo/keto reductase YP_001478437.1 2409025 D 399741 CDS YP_001478438.1 157370449 5605328 complement(2409988..2411838) 1 NC_009832.1 PFAM: Hemolysin-type calcium-binding region; lipase class 3; KEGG: plu:plu2313 hypothetical protein; triacylglycerol lipase 2411838 5605328 Spro_2209 Serratia proteamaculans 568 triacylglycerol lipase YP_001478438.1 2409988 R 399741 CDS YP_001478439.1 157370450 5605329 2412079..2412600 1 NC_009832.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: psp:PSPPH_1224 superoxide dismutase, Cu-Zn; superoxide dismutase 2412600 5605329 Spro_2210 Serratia proteamaculans 568 superoxide dismutase YP_001478439.1 2412079 D 399741 CDS YP_001478440.1 157370451 5605295 complement(2412610..2414622) 1 NC_009832.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: yen:YE2147 hypothetical protein; fusaric acid resistance protein region 2414622 5605295 Spro_2211 Serratia proteamaculans 568 fusaric acid resistance protein region YP_001478440.1 2412610 R 399741 CDS YP_001478441.1 157370452 5605296 complement(2414647..2415504) 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: yen:YE2146 putative HlyD-family protein; secretion protein HlyD family protein 2415504 5605296 Spro_2212 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001478441.1 2414647 R 399741 CDS YP_001478442.1 157370453 5605297 complement(2415508..2415744) 1 NC_009832.1 PFAM: protein of unknown function DUF1656; KEGG: yen:YE2145 putative inner membrane protein; hypothetical protein 2415744 5605297 Spro_2213 Serratia proteamaculans 568 hypothetical protein YP_001478442.1 2415508 R 399741 CDS YP_001478443.1 157370454 5605292 2415925..2416359 1 NC_009832.1 Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 2416359 5605292 Spro_2214 Serratia proteamaculans 568 transcriptional regulator SlyA YP_001478443.1 2415925 D 399741 CDS YP_001478444.1 157370455 5605293 complement(2416447..2416938) 1 NC_009832.1 PFAM: 17 kDa surface antigen; KEGG: sgl:SG1444 outer membrane lipoprotein; 17 kDa surface antigen 2416938 5605293 Spro_2215 Serratia proteamaculans 568 17 kDa surface antigen YP_001478444.1 2416447 R 399741 CDS YP_001478445.1 157370456 5605294 2417279..2418400 1 NC_009832.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2418400 anmK 5605294 anmK Serratia proteamaculans 568 anhydro-N-acetylmuramic acid kinase YP_001478445.1 2417279 D 399741 CDS YP_001478446.1 157370457 5605264 2418446..2418748 1 NC_009832.1 KEGG: yen:YE2141 putative lipoprotein; putative lipoprotein 2418748 5605264 Spro_2217 Serratia proteamaculans 568 putative lipoprotein YP_001478446.1 2418446 D 399741 CDS YP_001478447.1 157370458 5605265 2418836..2419489 1 NC_009832.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 2419489 5605265 Spro_2218 Serratia proteamaculans 568 pyridoxamine 5'-phosphate oxidase YP_001478447.1 2418836 D 399741 CDS YP_001478448.1 157370459 5605266 2419629..2420903 1 NC_009832.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2420903 5605266 Spro_2219 Serratia proteamaculans 568 tyrosyl-tRNA synthetase YP_001478448.1 2419629 D 399741 CDS YP_001478449.1 157370460 5605256 2420969..2421829 1 NC_009832.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2421829 5605256 Spro_2220 Serratia proteamaculans 568 pyridoxamine kinase YP_001478449.1 2420969 D 399741 CDS YP_001478450.1 157370461 5605257 complement(2421879..2422484) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE2137 glutathione S-transferase; glutathionine S-transferase 2422484 5605257 Spro_2221 Serratia proteamaculans 568 glutathionine S-transferase YP_001478450.1 2421879 R 399741 CDS YP_001478451.1 157370462 5605250 complement(2422577..2423461) 1 NC_009832.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: pfl:PFL_3321 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2423461 5605250 Spro_2222 Serratia proteamaculans 568 dihydrodipicolinate synthase YP_001478451.1 2422577 R 399741 CDS YP_001478452.1 157370463 5605251 complement(2423853..2424119) 1 NC_009832.1 KEGG: yen:YE2136 hypothetical protein; hypothetical protein 2424119 5605251 Spro_2223 Serratia proteamaculans 568 hypothetical protein YP_001478452.1 2423853 R 399741 CDS YP_001478453.1 157370464 5605252 complement(2424222..2424887) 1 NC_009832.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sme:SMc02632 hypothetical protein; metal dependent phosphohydrolase 2424887 5605252 Spro_2224 Serratia proteamaculans 568 metal dependent phosphohydrolase YP_001478453.1 2424222 R 399741 CDS YP_001478454.1 157370465 5605244 2425121..2425516 1 NC_009832.1 KEGG: cvi:CV_2861 hypothetical protein; hypothetical protein 2425516 5605244 Spro_2225 Serratia proteamaculans 568 hypothetical protein YP_001478454.1 2425121 D 399741 CDS YP_001478455.1 157370466 5605245 complement(2425894..2426271) 1 NC_009832.1 PFAM: Endoribonuclease L-PSP; KEGG: vpa:VP1797 hypothetical protein; endoribonuclease L-PSP 2426271 5605245 Spro_2226 Serratia proteamaculans 568 endoribonuclease L-PSP YP_001478455.1 2425894 R 399741 CDS YP_001478456.1 157370467 5605246 2426415..2427269 1 NC_009832.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: pau:PA14_40450 streptomycin 3''-phosphotransferase; aminoglycoside/hydroxyurea antibiotic resistance kinase 2427269 5605246 Spro_2227 Serratia proteamaculans 568 aminoglycoside/hydroxyurea antibiotic resistance kinase YP_001478456.1 2426415 D 399741 CDS YP_001478457.1 157370468 5605238 complement(2427234..2427734) 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: psp:PSPPH_1841 auxin-binding protein, putative; cupin 2 domain-containing protein 2427734 5605238 Spro_2228 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001478457.1 2427234 R 399741 CDS YP_001478458.1 157370469 5605239 complement(2427782..2428261) 1 NC_009832.1 PFAM: MEKHLA domain protein; KEGG: psb:Psyr_0755 hypothetical protein; MEKHLA domain-containing protein 2428261 5605239 Spro_2229 Serratia proteamaculans 568 MEKHLA domain-containing protein YP_001478458.1 2427782 R 399741 CDS YP_001478459.1 157370470 5605240 complement(2428379..2429572) 1 NC_009832.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: plu:plu0511 unnamed protein product; highly similar to benzoate membrane transport protein; benzoate transporter 2429572 5605240 Spro_2230 Serratia proteamaculans 568 benzoate transporter YP_001478459.1 2428379 R 399741 CDS YP_001478460.1 157370471 5605178 2429686..2430249 1 NC_009832.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: eca:ECA4472 putative DNA-binding protein; XRE family transcriptional regulator 2430249 5605178 Spro_2231 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001478460.1 2429686 D 399741 CDS YP_001478461.1 157370472 5605179 2430414..2432504 1 NC_009832.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: xcv:XCV0685 putative prolyl oligopeptidase precursor; prolyl oligopeptidase 2432504 5605179 Spro_2232 Serratia proteamaculans 568 prolyl oligopeptidase YP_001478461.1 2430414 D 399741 CDS YP_001478462.1 157370473 5605180 complement(2432574..2434094) 1 NC_009832.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; putative tripeptide transporter permease 2434094 tppB 5605180 tppB Serratia proteamaculans 568 putative tripeptide transporter permease YP_001478462.1 2432574 R 399741 CDS YP_001478463.1 157370474 5605172 complement(2434696..2435337) 1 NC_009832.1 KEGG: kpn:KPN_01970 endonuclease III; DNA glycosylase/apyrimidinic (AP) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 2435337 5605172 Spro_2234 Serratia proteamaculans 568 endonuclease III YP_001478463.1 2434696 R 399741 CDS YP_001478464.1 157370475 5605173 complement(2435337..2436035) 1 NC_009832.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit 2436035 5605173 Spro_2235 Serratia proteamaculans 568 electron transport complex RsxE subunit YP_001478464.1 2435337 R 399741 CDS YP_001478465.1 157370476 5605174 complement(2436032..2436661) 1 NC_009832.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2436661 5605174 Spro_2236 Serratia proteamaculans 568 electron transport complex protein RnfG YP_001478465.1 2436032 R 399741 CDS YP_001478466.1 157370477 5605169 complement(2436671..2437756) 1 NC_009832.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2437756 rnfD 5605169 rnfD Serratia proteamaculans 568 electron transport complex protein RnfD YP_001478466.1 2436671 R 399741 CDS YP_001478467.1 157370478 5605170 2438138..2439031 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1991 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 2439031 5605170 Spro_2238 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478467.1 2438138 D 399741 CDS YP_001478468.1 157370479 5605171 complement(2439067..2441178) 1 NC_009832.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ypi:YpsIP31758_1896 electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 2441178 5605171 Spro_2239 Serratia proteamaculans 568 RnfABCDGE type electron transport complex subunit C YP_001478468.1 2439067 R 399741 CDS YP_001478469.1 157370480 5605142 complement(2441171..2441743) 1 NC_009832.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2441743 5605142 Spro_2240 Serratia proteamaculans 568 electron transport complex protein RnfB YP_001478469.1 2441171 R 399741 CDS YP_001478470.1 157370481 5605143 complement(2441743..2442324) 1 NC_009832.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: yen:YE1994 hypothetical protein; RnfABCDGE type electron transport complex subunit A 2442324 5605143 Spro_2241 Serratia proteamaculans 568 RnfABCDGE type electron transport complex subunit A YP_001478470.1 2441743 R 399741 CDS YP_001478471.1 157370482 5605144 complement(2442470..2442910) 1 NC_009832.1 KEGG: yen:YE1996 hypothetical protein; hypothetical protein 2442910 5605144 Spro_2242 Serratia proteamaculans 568 hypothetical protein YP_001478471.1 2442470 R 399741 CDS YP_001478472.1 157370483 5605121 complement(2443070..2444575) 1 NC_009832.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2444575 5605121 Spro_2243 Serratia proteamaculans 568 L-arabinose isomerase YP_001478472.1 2443070 R 399741 CDS YP_001478473.1 157370484 5605122 complement(2444607..2446292) 1 NC_009832.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2446292 5605122 Spro_2244 Serratia proteamaculans 568 ribulokinase YP_001478473.1 2444607 R 399741 CDS YP_001478474.1 157370485 5605123 2446654..2447637 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE2003 L-arabinose-binding periplasmic protein precursor; monosaccharide-transporting ATPase 2447637 5605123 Spro_2245 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001478474.1 2446654 D 399741 CDS YP_001478475.1 157370486 5605100 2447698..2449233 1 NC_009832.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2449233 araG 5605100 araG Serratia proteamaculans 568 L-arabinose transporter ATP-binding protein YP_001478475.1 2447698 D 399741 CDS YP_001478476.1 157370487 5605101 2449251..2450234 1 NC_009832.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2450234 araH 5605101 araH Serratia proteamaculans 568 L-arabinose transporter permease YP_001478476.1 2449251 D 399741 CDS YP_001478477.1 157370488 5605102 2450337..2451254 1 NC_009832.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 2451254 5605102 Spro_2248 Serratia proteamaculans 568 DNA-binding transcriptional regulator AraC YP_001478477.1 2450337 D 399741 CDS YP_001478478.1 157370489 5605089 2451336..2452376 1 NC_009832.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE2007 putative oxidoreductase; putative oxidoreductase 2452376 5605089 Spro_2249 Serratia proteamaculans 568 putative oxidoreductase YP_001478478.1 2451336 D 399741 CDS YP_001478479.1 157370490 5605090 2452443..2453441 1 NC_009832.1 KEGG: yen:YE2008 hypothetical protein; hypothetical protein 2453441 5605090 Spro_2250 Serratia proteamaculans 568 hypothetical protein YP_001478479.1 2452443 D 399741 CDS YP_001478480.1 157370491 5605091 complement(2453576..2454574) 1 NC_009832.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 2454574 5605091 Spro_2251 Serratia proteamaculans 568 adenosine deaminase YP_001478480.1 2453576 R 399741 CDS YP_001478481.1 157370492 5605084 complement(2454764..2455360) 1 NC_009832.1 KEGG: kpn:KPN_04198 putative serine protease; putative serine protease 2455360 5605084 Spro_2252 Serratia proteamaculans 568 putative serine protease YP_001478481.1 2454764 R 399741 CDS YP_001478482.1 157370493 5605085 complement(2455357..2455794) 1 NC_009832.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: kpn:KPN_04197 putative PTS family enzyme IIA component; putative PTS IIA-like nitrogen-regulatory protein PtsN 2455794 5605085 Spro_2253 Serratia proteamaculans 568 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001478482.1 2455357 R 399741 CDS YP_001478483.1 157370494 5605086 complement(2455804..2456073) 1 NC_009832.1 KEGG: eca:ECA2355 hypothetical protein; hypothetical protein 2456073 5605086 Spro_2254 Serratia proteamaculans 568 hypothetical protein YP_001478483.1 2455804 R 399741 CDS YP_001478484.1 157370495 5605073 complement(2456148..2456990) 1 NC_009832.1 KEGG: kpn:KPN_04196 putative ketose-bisphosphate aldolase, class-II; TIGRFAM: ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; ketose-bisphosphate aldolase 2456990 5605073 Spro_2255 Serratia proteamaculans 568 ketose-bisphosphate aldolase YP_001478484.1 2456148 R 399741 CDS YP_001478485.1 157370496 5605074 complement(2456977..2458344) 1 NC_009832.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 2458344 5605074 Spro_2256 Serratia proteamaculans 568 PTS system ascorbate-specific transporter subunit IIC YP_001478485.1 2456977 R 399741 CDS YP_001478486.1 157370497 5605026 complement(2458337..2458651) 1 NC_009832.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: kpn:KPN_04194 putative PTS family enzyme II component; phosphotransferase system lactose/cellobiose-specific IIB subunit 2458651 5605026 Spro_2257 Serratia proteamaculans 568 phosphotransferase system lactose/cellobiose-specific IIB subunit YP_001478486.1 2458337 R 399741 CDS YP_001478487.1 157370498 5605027 complement(2458662..2459642) 1 NC_009832.1 PFAM: phosphofructokinase; KEGG: kpn:KPN_04193 putative 6-phosphofructokinase; phosphofructokinase 2459642 5605027 Spro_2258 Serratia proteamaculans 568 phosphofructokinase YP_001478487.1 2458662 R 399741 CDS YP_001478488.1 157370499 5605028 complement(2460027..2460782) 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bch:Bcen2424_0941 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 2460782 5605028 Spro_2259 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001478488.1 2460027 R 399741 CDS YP_001478489.1 157370500 5604949 2460883..2461479 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: bvi:Bcep1808_0859 NUDIX hydrolase; NUDIX hydrolase 2461479 5604949 Spro_2260 Serratia proteamaculans 568 NUDIX hydrolase YP_001478489.1 2460883 D 399741 CDS YP_001478490.1 157370501 5604950 2461476..2461844 1 NC_009832.1 KEGG: bch:Bcen2424_0943 hypothetical protein; hypothetical protein 2461844 5604950 Spro_2261 Serratia proteamaculans 568 hypothetical protein YP_001478490.1 2461476 D 399741 CDS YP_001478491.1 157370502 5604951 complement(2461882..2463063) 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: yen:YE2010 putative aminotransferase; class I and II aminotransferase 2463063 5604951 Spro_2262 Serratia proteamaculans 568 class I and II aminotransferase YP_001478491.1 2461882 R 399741 CDS YP_001478492.1 157370503 5604936 complement(2463056..2464480) 1 NC_009832.1 TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, maltose and glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE2011 PTS system, maltose and glucose-specific IIAbc component; PTS system maltose and glucose-specific transporter IIBC 2464480 5604936 Spro_2263 Serratia proteamaculans 568 PTS system maltose and glucose-specific transporter IIBC YP_001478492.1 2463056 R 399741 CDS YP_001478493.1 157370504 5604937 complement(2464528..2465814) 1 NC_009832.1 PFAM: integrase family protein; KEGG: yen:YE2364 putative phage integrase; integrase family protein 2465814 5604937 Spro_2264 Serratia proteamaculans 568 integrase family protein YP_001478493.1 2464528 R 399741 CDS YP_001478494.1 157370505 5604938 complement(2465829..2466107) 1 NC_009832.1 PFAM: protein of unknown function DUF1233 excisionase putative; KEGG: ypm:YP_1930 putative phage excisionase; hypothetical protein 2466107 5604938 Spro_2265 Serratia proteamaculans 568 hypothetical protein YP_001478494.1 2465829 R 399741 CDS YP_001478495.1 157370506 5604907 2467811..2468089 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 2468089 5604907 Spro_2266 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001478495.1 2467811 D 399741 CDS YP_001478496.1 157370507 5604908 2468110..2468961 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 2468961 5604908 Spro_2267 Serratia proteamaculans 568 Integrase catalytic subunit YP_001478496.1 2468110 D 399741 CDS YP_001478497.1 157370508 5604909 complement(2469231..2470421) 1 NC_009832.1 PFAM: acyltransferase 3; KEGG: ret:RHE_CH00500 probable acyltransferase protein; acyltransferase 3 2470421 5604909 Spro_2268 Serratia proteamaculans 568 acyltransferase 3 YP_001478497.1 2469231 R 399741 CDS YP_001478498.1 157370509 5604904 complement(2470649..2471356) 1 NC_009832.1 PFAM: lipolytic protein G-D-S-L family; KEGG: vvu:VV1_1768 lysophospholipase L1; GDSL family lipase 2471356 5604904 Spro_2269 Serratia proteamaculans 568 GDSL family lipase YP_001478498.1 2470649 R 399741 CDS YP_001478499.1 157370510 5604905 complement(2471623..2471847) 1 NC_009832.1 KEGG: yen:YE2011 PTS system, maltose and glucose-specific IIAbc component; PTS system maltose and glucose-specific transporter subunit IIABC 2471847 5604905 Spro_2270 Serratia proteamaculans 568 PTS system maltose and glucose-specific transporter subunit IIABC YP_001478499.1 2471623 R 399741 CDS YP_001478500.1 157370511 5604906 2472046..2473104 1 NC_009832.1 regulates malXY which are involved in maltose-glucose transport; DNA-binding transcriptional repressor MalI 2473104 5604906 Spro_2271 Serratia proteamaculans 568 DNA-binding transcriptional repressor MalI YP_001478500.1 2472046 D 399741 CDS YP_001478501.1 157370512 5604898 complement(2473107..2473994) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4361 transcriptional regulator, LysR family; LysR family transcriptional regulator 2473994 5604898 Spro_2272 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478501.1 2473107 R 399741 CDS YP_001478502.1 157370513 5604899 2474186..2475322 1 NC_009832.1 PFAM: beta-lactamase; KEGG: sbl:Sbal_2086 beta-lactamase; beta-lactamase 2475322 5604899 Spro_2273 Serratia proteamaculans 568 beta-lactamase YP_001478502.1 2474186 D 399741 CDS YP_001478503.1 157370514 5604900 complement(2475334..2476263) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vpa:VP1676 putative transcriptional regulator; LysR family transcriptional regulator 2476263 5604900 Spro_2274 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478503.1 2475334 R 399741 CDS YP_001478504.1 157370515 5604880 2476366..2477517 1 NC_009832.1 PFAM: beta-lactamase; KEGG: bpd:BURPS668_A1860 putative esterase; beta-lactamase 2477517 5604880 Spro_2275 Serratia proteamaculans 568 beta-lactamase YP_001478504.1 2476366 D 399741 CDS YP_001478505.1 157370516 5604881 complement(2477561..2479090) 1 NC_009832.1 PFAM: protein of unknown function DUF945; KEGG: yen:YE2014 hypothetical protein; hypothetical protein 2479090 5604881 Spro_2276 Serratia proteamaculans 568 hypothetical protein YP_001478505.1 2477561 R 399741 CDS YP_001478506.1 157370517 5604882 complement(2479245..2480423) 1 NC_009832.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; KEGG: yen:YE2015 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase, class I 2480423 5604882 Spro_2277 Serratia proteamaculans 568 mannose-6-phosphate isomerase, class I YP_001478506.1 2479245 R 399741 CDS YP_001478507.1 157370518 5604840 2480877..2481230 1 NC_009832.1 KEGG: reu:Reut_A2446 probable signal peptide protein; hypothetical protein 2481230 5604840 Spro_2278 Serratia proteamaculans 568 hypothetical protein YP_001478507.1 2480877 D 399741 CDS YP_001478508.1 157370519 5604841 2481484..2482881 1 NC_009832.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2482881 fumC 5604841 fumC Serratia proteamaculans 568 fumarate hydratase YP_001478508.1 2481484 D 399741 CDS YP_001478509.1 157370520 5604842 complement(2482979..2483917) 1 NC_009832.1 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 2483917 5604842 Spro_2280 Serratia proteamaculans 568 DNA replication terminus site-binding protein YP_001478509.1 2482979 R 399741 CDS YP_001478510.1 157370521 5604837 complement(2484073..2485338) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE2021 hypothetical protein; major facilitator transporter 2485338 5604837 Spro_2281 Serratia proteamaculans 568 major facilitator transporter YP_001478510.1 2484073 R 399741 CDS YP_001478511.1 157370522 5604838 2485484..2486392 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2022 probable LysR-family transcriptional regulator; LysR family transcriptional regulator 2486392 5604838 Spro_2282 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478511.1 2485484 D 399741 CDS YP_001478512.1 157370523 5604839 2486532..2487749 1 NC_009832.1 PFAM: ROK family protein; KEGG: yen:YE2023 putative ROK family transcriptional regulatory protein; ROK family protein 2487749 5604839 Spro_2283 Serratia proteamaculans 568 ROK family protein YP_001478512.1 2486532 D 399741 CDS YP_001478513.1 157370524 5604807 2487901..2488572 1 NC_009832.1 KEGG: yen:YE2024 putative dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2488572 5604807 Spro_2284 Serratia proteamaculans 568 dethiobiotin synthase YP_001478513.1 2487901 D 399741 CDS YP_001478514.1 157370525 5604808 complement(2488569..2489849) 1 NC_009832.1 PFAM: Chloride channel core; KEGG: yen:YE2025 hypothetical protein; putative voltage-gated ClC-type chloride channel ClcB 2489849 5604808 Spro_2285 Serratia proteamaculans 568 putative voltage-gated ClC-type chloride channel ClcB YP_001478514.1 2488569 R 399741 CDS YP_001478515.1 157370526 5604809 2490124..2491611 1 NC_009832.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2256 putative transporter; EmrB/QacA family drug resistance transporter 2491611 5604809 Spro_2286 Serratia proteamaculans 568 EmrB/QacA family drug resistance transporter YP_001478515.1 2490124 D 399741 CDS YP_001478516.1 157370527 5604795 complement(2491651..2491950) 1 NC_009832.1 PFAM: protein of unknown function DUF1161; KEGG: ypi:YpsIP31758_1866 putative lipoprotein; hypothetical protein 2491950 5604795 Spro_2287 Serratia proteamaculans 568 hypothetical protein YP_001478516.1 2491651 R 399741 CDS YP_001478517.1 157370528 5604796 complement(2492041..2492409) 1 NC_009832.1 PFAM: protein of unknown function DUF1283; KEGG: yen:YE2026 hypothetical protein; hypothetical protein 2492409 5604796 Spro_2288 Serratia proteamaculans 568 hypothetical protein YP_001478517.1 2492041 R 399741 CDS YP_001478518.1 157370529 5604797 2492558..2492884 1 NC_009832.1 PFAM: protein of unknown function UPF0060; KEGG: yen:YE2027 hypothetical protein; hypothetical protein 2492884 5604797 Spro_2289 Serratia proteamaculans 568 hypothetical protein YP_001478518.1 2492558 D 399741 CDS YP_001478519.1 157370530 5604793 complement(2492920..2493669) 1 NC_009832.1 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase 2493669 5604793 Spro_2290 Serratia proteamaculans 568 3-hydroxy acid dehydrogenase YP_001478519.1 2492920 R 399741 CDS YP_001478520.1 157370531 5604794 complement(2493859..2494380) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bch:Bcen2424_3796 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2494380 5604794 Spro_2291 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478520.1 2493859 R 399741 CDS YP_001478521.1 157370532 5604784 complement(2494477..2495949) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2029 putative membrane transport protein; major facilitator transporter 2495949 5604784 Spro_2292 Serratia proteamaculans 568 major facilitator transporter YP_001478521.1 2494477 R 399741 CDS YP_001478522.1 157370533 5604785 complement(2496118..2497197) 1 NC_009832.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_1240 ABC transporter related; ABC transporter-like protein 2497197 5604785 Spro_2293 Serratia proteamaculans 568 ABC transporter-like protein YP_001478522.1 2496118 R 399741 CDS YP_001478523.1 157370534 5604786 complement(2497197..2498150) 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: ret:RHE_CH03378 probable sugar kinase protein; ribokinase-like domain-containing protein 2498150 5604786 Spro_2294 Serratia proteamaculans 568 ribokinase-like domain-containing protein YP_001478523.1 2497197 R 399741 CDS YP_001478524.1 157370535 5604778 complement(2498170..2499009) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21219 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 2499009 5604778 Spro_2295 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478524.1 2498170 R 399741 CDS YP_001478525.1 157370536 5604779 complement(2498999..2499913) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_4556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2499913 5604779 Spro_2296 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478525.1 2498999 R 399741 CDS YP_001478526.1 157370537 5604780 complement(2499917..2501167) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH03374 probable sugar ABC transporter, substrate-binding protein; extracellular solute-binding protein 2501167 5604780 Spro_2297 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478526.1 2499917 R 399741 CDS YP_001478527.1 157370538 5604705 2501268..2502443 1 NC_009832.1 PFAM: ROK family protein; KEGG: cvi:CV_2895 probable transcriptional regulator protein; ROK family protein 2502443 5604705 Spro_2298 Serratia proteamaculans 568 ROK family protein YP_001478527.1 2501268 D 399741 CDS YP_001478528.1 157370539 5604706 2502754..2504085 1 NC_009832.1 TIGRFAM: Guanine deaminase; PFAM: amidohydrolase; KEGG: ppr:PBPRA1930 putative guanine aminohydrolase; guanine deaminase 2504085 5604706 Spro_2299 Serratia proteamaculans 568 guanine deaminase YP_001478528.1 2502754 D 399741 CDS YP_001478529.1 157370540 5604707 2504082..2505512 1 NC_009832.1 TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: pst:PSPTO_3660 xanthine dehydrogenase, N-terminal subunit; xanthine dehydrogenase small subunit 2505512 5604707 Spro_2300 Serratia proteamaculans 568 xanthine dehydrogenase small subunit YP_001478529.1 2504082 D 399741 CDS YP_001478530.1 157370541 5604699 2505505..2507898 1 NC_009832.1 KEGG: pau:PA14_44740 xanthine dehydrogenase; TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase molybdopterin binding subunit 2507898 5604699 Spro_2301 Serratia proteamaculans 568 xanthine dehydrogenase molybdopterin binding subunit YP_001478530.1 2505505 D 399741 CDS YP_001478531.1 157370542 5604700 2507891..2508658 1 NC_009832.1 TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: pau:PA14_44760 putative xanthine dehydrogenase accessory factor X; xanthine dehydrogenase accessory protein XdhC 2508658 5604700 Spro_2302 Serratia proteamaculans 568 xanthine dehydrogenase accessory protein XdhC YP_001478531.1 2507891 D 399741 CDS YP_001478532.1 157370543 5604701 complement(2508674..2509678) 1 NC_009832.1 KEGG: vei:Veis_4629 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 2509678 5604701 Spro_2303 Serratia proteamaculans 568 fumarylacetoacetate (FAA) hydrolase YP_001478532.1 2508674 R 399741 CDS YP_001478533.1 157370544 5604690 complement(2509675..2510256) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vei:Veis_4630 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2510256 5604690 Spro_2304 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001478533.1 2509675 R 399741 CDS YP_001478534.1 157370545 5604691 complement(2510283..2511128) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_4725 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 2511128 5604691 Spro_2305 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001478534.1 2510283 R 399741 CDS YP_001478535.1 157370546 5604692 2511495..2513696 1 NC_009832.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: xac:XAC0249 peptidyl-dipeptidase; peptidyl-dipeptidase Dcp 2513696 5604692 Spro_2306 Serratia proteamaculans 568 peptidyl-dipeptidase Dcp YP_001478535.1 2511495 D 399741 CDS YP_001478536.1 157370547 5604687 complement(2513827..2515134) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_3940 major facilitator family transporter; major facilitator transporter 2515134 5604687 Spro_2307 Serratia proteamaculans 568 major facilitator transporter YP_001478536.1 2513827 R 399741 CDS YP_001478537.1 157370548 5604688 complement(2515253..2515888) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: ppf:Pput_1896 isochorismatase hydrolase; N-carbamoylsarcosine amidase 2515888 5604688 Spro_2308 Serratia proteamaculans 568 N-carbamoylsarcosine amidase YP_001478537.1 2515253 R 399741 CDS YP_001478538.1 157370549 5604689 complement(2515898..2516650) 1 NC_009832.1 PFAM: Asp/Glu racemase; KEGG: ppf:Pput_1895 Asp/Glu racemase; Asp/Glu racemase 2516650 5604689 Spro_2309 Serratia proteamaculans 568 Asp/Glu racemase YP_001478538.1 2515898 R 399741 CDS YP_001478539.1 157370550 5604643 complement(2516667..2517461) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: ppu:PP_3943 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein 2517461 5604643 Spro_2310 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001478539.1 2516667 R 399741 CDS YP_001478540.1 157370551 5604644 complement(2517458..2518609) 1 NC_009832.1 PFAM: monooxygenase FAD-binding; KEGG: ppf:Pput_1893 monooxygenase, FAD-binding; FAD-binding monooxygenase 2518609 5604644 Spro_2311 Serratia proteamaculans 568 FAD-binding monooxygenase YP_001478540.1 2517458 R 399741 CDS YP_001478541.1 157370552 5604645 2518938..2519996 1 NC_009832.1 KEGG: ppf:Pput_1892 hypothetical protein; hypothetical protein 2519996 5604645 Spro_2312 Serratia proteamaculans 568 hypothetical protein YP_001478541.1 2518938 D 399741 CDS YP_001478542.1 157370553 5604592 2520062..2520535 1 NC_009832.1 PFAM: regulatory protein MarR; KEGG: reu:Reut_A2508 regulatory protein, MarR; MarR family transcriptional regulator 2520535 5604592 Spro_2313 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001478542.1 2520062 D 399741 CDS YP_001478543.1 157370554 5604593 2520614..2521156 1 NC_009832.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: ppf:Pput_1890 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2521156 5604593 Spro_2314 Serratia proteamaculans 568 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001478543.1 2520614 D 399741 CDS YP_001478544.1 157370555 5604594 2521149..2524724 1 NC_009832.1 PFAM: cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ppu:PP_3948 aldehyde dehydrogenase family protein, putative/cytochrome c family protein, putative; aldehyde oxidase and xanthine dehydrogenase 2524724 5604594 Spro_2315 Serratia proteamaculans 568 aldehyde oxidase and xanthine dehydrogenase YP_001478544.1 2521149 D 399741 CDS YP_001478545.1 157370556 5604565 2525461..2526756 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: pau:PA14_10350 putative secretion protein; secretion protein HlyD family protein 2526756 5604565 Spro_2316 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001478545.1 2525461 D 399741 CDS YP_001478546.1 157370557 5604566 2526759..2528894 1 NC_009832.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: bps:BPSL3093 colicin V processing peptidase; ABC transporter-like protein 2528894 5604566 Spro_2317 Serratia proteamaculans 568 ABC transporter-like protein YP_001478546.1 2526759 D 399741 CDS YP_001478547.1 157370558 5604567 complement(2528921..2530078) 1 NC_009832.1 PFAM: monooxygenase FAD-binding; KEGG: kpn:KPN_01663 putative flavoprotein monooxygenase; FAD-binding monooxygenase 2530078 5604567 Spro_2318 Serratia proteamaculans 568 FAD-binding monooxygenase YP_001478547.1 2528921 R 399741 CDS YP_001478548.1 157370559 5604381 2530400..2532607 1 NC_009832.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: swi:Swit_3976 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase 2532607 5604381 Spro_2319 Serratia proteamaculans 568 aldehyde oxidase and xanthine dehydrogenase YP_001478548.1 2530400 D 399741 CDS YP_001478549.1 157370560 5604382 2532621..2533079 1 NC_009832.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bch:Bcen2424_4406 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2533079 5604382 Spro_2320 Serratia proteamaculans 568 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001478549.1 2532621 D 399741 CDS YP_001478550.1 157370561 5604383 2533091..2534395 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_5380 cytochrome c, class I; gluconate 2-dehydrogenase 2534395 5604383 Spro_2321 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478550.1 2533091 D 399741 CDS YP_001478551.1 157370562 5604243 complement(2534432..2535601) 1 NC_009832.1 PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: plu:plu2325 putative oxalate decarboxylase; oxalate decarboxylase 2535601 5604243 Spro_2322 Serratia proteamaculans 568 oxalate decarboxylase YP_001478551.1 2534432 R 399741 CDS YP_001478552.1 157370563 5604244 2536186..2538051 1 NC_009832.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, beta-glucoside-specific IIABC subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: eca:ECA0860 PTS system, IIabc component; PTS system beta-glucoside-specific transporter subunit IIABC 2538051 5604244 Spro_2323 Serratia proteamaculans 568 PTS system beta-glucoside-specific transporter subunit IIABC YP_001478552.1 2536186 D 399741 CDS YP_001478553.1 157370564 5604245 2538048..2539460 1 NC_009832.1 PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0859 beta-glucosidase; glycoside hydrolase family protein 2539460 5604245 Spro_2324 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478553.1 2538048 D 399741 CDS YP_001478554.1 157370565 5604177 2539486..2540325 1 NC_009832.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA0858 putative beta-glucoside operon antiterminator; transcriptional antiterminator, BglG 2540325 5604177 Spro_2325 Serratia proteamaculans 568 transcriptional antiterminator, BglG YP_001478554.1 2539486 D 399741 CDS YP_001478555.1 157370566 5604178 complement(2540322..2541242) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1186 transcriptional regulator, LysR family; LysR family transcriptional regulator 2541242 5604178 Spro_2326 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478555.1 2540322 R 399741 CDS YP_001478556.1 157370567 5604160 2541267..2541914 1 NC_009832.1 PFAM: Chromate transporter; KEGG: bbr:BB1316 putative chromate transporter; chromate transporter 2541914 5604160 Spro_2327 Serratia proteamaculans 568 chromate transporter YP_001478556.1 2541267 D 399741 CDS YP_001478557.1 157370568 5604161 2541911..2542432 1 NC_009832.1 PFAM: Chromate transporter; KEGG: bxe:Bxe_B2837 chromate transporter; chromate transporter 2542432 5604161 Spro_2328 Serratia proteamaculans 568 chromate transporter YP_001478557.1 2541911 D 399741 CDS YP_001478558.1 157370569 5604162 complement(2542473..2542889) 1 NC_009832.1 PFAM: metalloprotease inhibitor I38; KEGG: eca:ECA2784 protease inhibitor; metalloprotease inhibitor I38 2542889 5604162 Spro_2329 Serratia proteamaculans 568 metalloprotease inhibitor I38 YP_001478558.1 2542473 R 399741 CDS YP_001478559.1 157370570 5604154 2543161..2543895 1 NC_009832.1 KEGG: rso:RSc1273 putative lipoprotein; putative lipoprotein 2543895 5604154 Spro_2330 Serratia proteamaculans 568 putative lipoprotein YP_001478559.1 2543161 D 399741 CDS YP_001478560.1 157370571 5604155 complement(2543879..2544379) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pcr:Pcryo_1332 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2544379 5604155 Spro_2331 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478560.1 2543879 R 399741 CDS YP_001478561.1 157370572 5604156 complement(2544409..2545416) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: pst:PSPTO_3264 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein 2545416 5604156 Spro_2332 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001478561.1 2544409 R 399741 CDS YP_001478562.1 157370573 5604070 complement(2545643..2547247) 1 NC_009832.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: bch:Bcen2424_4610 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 2547247 5604070 Spro_2333 Serratia proteamaculans 568 glucose-methanol-choline oxidoreductase YP_001478562.1 2545643 R 399741 CDS YP_001478563.1 157370574 5604071 complement(2547267..2547785) 1 NC_009832.1 KEGG: bch:Bcen2424_4611 hypothetical protein; hypothetical protein 2547785 5604071 Spro_2334 Serratia proteamaculans 568 hypothetical protein YP_001478563.1 2547267 R 399741 CDS YP_001478564.1 157370575 5604072 complement(2547796..2549076) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4612 cytochrome c, class I; gluconate 2-dehydrogenase 2549076 5604072 Spro_2335 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478564.1 2547796 R 399741 CDS YP_001478565.1 157370576 5604059 complement(2549298..2550203) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1742 putative inner membrane protein; hypothetical protein 2550203 5604059 Spro_2336 Serratia proteamaculans 568 hypothetical protein YP_001478565.1 2549298 R 399741 CDS YP_001478566.1 157370577 5604060 2550381..2551250 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1743 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 2551250 5604060 Spro_2337 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478566.1 2550381 D 399741 CDS YP_001478567.1 157370578 5604061 2551269..2551706 1 NC_009832.1 KEGG: eca:ECA2819 hypothetical protein; hypothetical protein 2551706 5604061 Spro_2338 Serratia proteamaculans 568 hypothetical protein YP_001478567.1 2551269 D 399741 CDS YP_001478568.1 157370579 5604021 complement(2551714..2552934) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: sgl:SG0019 putative transport protein; major facilitator transporter 2552934 5604021 Spro_2339 Serratia proteamaculans 568 major facilitator transporter YP_001478568.1 2551714 R 399741 CDS YP_001478569.1 157370580 5604022 complement(2553060..2554274) 1 NC_009832.1 KEGG: eca:ECA2249 hypothetical protein; hypothetical protein 2554274 5604022 Spro_2340 Serratia proteamaculans 568 hypothetical protein YP_001478569.1 2553060 R 399741 CDS YP_001478570.1 157370581 5604023 complement(2554267..2555097) 1 NC_009832.1 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase 2555097 5604023 Spro_2341 Serratia proteamaculans 568 mannosyl-3-phosphoglycerate phosphatase YP_001478570.1 2554267 R 399741 CDS YP_001478571.1 157370582 5603909 complement(2555329..2555661) 1 NC_009832.1 KEGG: eca:ECA2241 hypothetical protein; hypothetical protein 2555661 5603909 Spro_2342 Serratia proteamaculans 568 hypothetical protein YP_001478571.1 2555329 R 399741 CDS YP_001478572.1 157370583 5603910 complement(2555684..2555917) 1 NC_009832.1 PFAM: protein of unknown function DUF172; KEGG: ypi:YpsIP31758_2237 prevent-host-death family protein; hypothetical protein 2555917 5603910 Spro_2343 Serratia proteamaculans 568 hypothetical protein YP_001478572.1 2555684 R 399741 CDS YP_001478573.1 157370584 5603911 2556031..2556912 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2184 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2556912 5603911 Spro_2344 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478573.1 2556031 D 399741 CDS YP_001478574.1 157370585 5603868 2557159..2558031 1 NC_009832.1 KEGG: bte:BTH_II1440 hypothetical protein; RpiR family transcriptional regulator 2558031 5603868 Spro_2345 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001478574.1 2557159 D 399741 CDS YP_001478575.1 157370586 5603869 2558061..2558624 1 NC_009832.1 catalyzes the hydrolysis of D-alanyl-D-alanine dipeptide: Zn dependent; involved in peptidoglycan synthesis; D-alanyl-D-alanine dipeptidase 2558624 5603869 Spro_2346 Serratia proteamaculans 568 D-alanyl-D-alanine dipeptidase YP_001478575.1 2558061 D 399741 CDS YP_001478576.1 157370587 5603870 2558660..2560210 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: ecs:ECs2091 putative hemin-binding lipoprotein; extracellular solute-binding protein 2560210 5603870 Spro_2347 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478576.1 2558660 D 399741 CDS YP_001478577.1 157370588 5603691 2560397..2561413 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1571 putative transport system permease protein; binding-protein-dependent transport systems inner membrane component 2561413 5603691 Spro_2348 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478577.1 2560397 D 399741 CDS YP_001478578.1 157370589 5603692 2561419..2562306 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecs:ECs2089 putative transport protein; ATP-dependent peptide transporter membrane subunit 2562306 5603692 Spro_2349 Serratia proteamaculans 568 ATP-dependent peptide transporter membrane subunit YP_001478578.1 2561419 D 399741 CDS YP_001478579.1 157370590 5603693 2562306..2563310 1 NC_009832.1 KEGG: ecj:JW1479 D-Ala-D-Ala transporter subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2563310 5603693 Spro_2350 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001478579.1 2562306 D 399741 CDS YP_001478580.1 157370591 5603640 2563300..2564247 1 NC_009832.1 KEGG: ecs:ECs2087 putative ATP-binding component of a transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2564247 5603640 Spro_2351 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001478580.1 2563300 D 399741 CDS YP_001478581.1 157370592 5603641 complement(2564260..2565048) 1 NC_009832.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: ypi:YpsIP31758_1025 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 2565048 5603641 Spro_2352 Serratia proteamaculans 568 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_001478581.1 2564260 R 399741 CDS YP_001478582.1 157370593 5603642 complement(2565279..2566868) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0529 major facilitator superfamily (MFS) efflux pump; major facilitator transporter 2566868 5603642 Spro_2353 Serratia proteamaculans 568 major facilitator transporter YP_001478582.1 2565279 R 399741 CDS YP_001478583.1 157370594 5603635 2566924..2567790 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpe:RPE_2870 transcriptional regulator, LysR family; LysR family transcriptional regulator 2567790 5603635 Spro_2354 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478583.1 2566924 D 399741 CDS YP_001478584.1 157370595 5603636 complement(2567798..2568079) 1 NC_009832.1 KEGG: kpn:KPN_04460 hypothetical protein; hypothetical protein 2568079 5603636 Spro_2355 Serratia proteamaculans 568 hypothetical protein YP_001478584.1 2567798 R 399741 CDS YP_001478585.1 157370596 5603637 2568363..2570288 1 NC_009832.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: kpn:KPN_01815 cell elongation, e phase; peptidoglycan synthetase; penicillin-binding protein 2; peptidoglycan glycosyltransferase 2570288 5603637 Spro_2356 Serratia proteamaculans 568 peptidoglycan glycosyltransferase YP_001478585.1 2568363 D 399741 CDS YP_001478586.1 157370597 5603556 2570391..2572109 1 NC_009832.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: yen:YE1767 peptidoglycan synthetase; peptidoglycan glycosyltransferase 2572109 5603556 Spro_2357 Serratia proteamaculans 568 peptidoglycan glycosyltransferase YP_001478586.1 2570391 D 399741 CDS YP_001478587.1 157370598 5603557 complement(2572144..2573382) 1 NC_009832.1 KEGG: pae:PA3497 hypothetical protein; hypothetical protein 2573382 5603557 Spro_2358 Serratia proteamaculans 568 hypothetical protein YP_001478587.1 2572144 R 399741 CDS YP_001478588.1 157370599 5603558 complement(2573825..2574037) 1 NC_009832.1 KEGG: stm:STM1705 osmotically inducible lipoprotein; osmotically inducible lipoprotein 2574037 5603558 Spro_2359 Serratia proteamaculans 568 osmotically inducible lipoprotein YP_001478588.1 2573825 R 399741 CDS YP_001478589.1 157370600 5603054 2575334..2575459 1 NC_009832.1 KEGG: sfv:SFV_0578 hypothetical protein; hypothetical protein 2575459 5603054 Spro_2360 Serratia proteamaculans 568 hypothetical protein YP_001478589.1 2575334 D 399741 CDS YP_001478590.1 157370601 5603055 complement(2575497..2576258) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0854 ABC transporter, ATP-binding protein; ABC transporter-like protein 2576258 5603055 Spro_2361 Serratia proteamaculans 568 ABC transporter-like protein YP_001478590.1 2575497 R 399741 CDS YP_001478591.1 157370602 5603041 complement(2576255..2577172) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0855 ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 2577172 5603041 Spro_2362 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001478591.1 2576255 R 399741 CDS YP_001478592.1 157370603 5603042 complement(2577169..2578083) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA0856 ABC transporter, periplasmic binding protein; extracellular solute-binding protein 2578083 5603042 Spro_2363 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478592.1 2577169 R 399741 CDS YP_001478593.1 157370604 5603043 complement(2578100..2579437) 1 NC_009832.1 KEGG: ava:Ava_1266 xenobiotic compound monooxygenase, DszA family, A subunit; xenobiotic compound monooxygenase subunit A 2579437 5603043 Spro_2364 Serratia proteamaculans 568 xenobiotic compound monooxygenase subunit A YP_001478593.1 2578100 R 399741 CDS YP_001478594.1 157370605 5603023 complement(2579455..2580774) 1 NC_009832.1 PFAM: MmgE/PrpD family protein; KEGG: eca:ECA3784 hypothetical protein; MmgE/PrpD family protein 2580774 5603023 Spro_2365 Serratia proteamaculans 568 MmgE/PrpD family protein YP_001478594.1 2579455 R 399741 CDS YP_001478595.1 157370606 5603024 complement(2581039..2581902) 1 NC_009832.1 KEGG: bpe:BP0300 putative esterase; putative esterase 2581902 5603024 Spro_2366 Serratia proteamaculans 568 putative esterase YP_001478595.1 2581039 R 399741 CDS YP_001478596.1 157370607 5603025 2582084..2583520 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_0977 major facilitator superfamily MFS_1; major facilitator transporter 2583520 5603025 Spro_2367 Serratia proteamaculans 568 major facilitator transporter YP_001478596.1 2582084 D 399741 CDS YP_001478597.1 157370608 5602941 complement(2583499..2583900) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1189 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2583900 5602941 Spro_2368 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001478597.1 2583499 R 399741 CDS YP_001478598.1 157370609 5602942 complement(2583982..2585229) 1 NC_009832.1 KEGG: ent:Ent638_1138 hypothetical protein; hypothetical protein 2585229 5602942 Spro_2369 Serratia proteamaculans 568 hypothetical protein YP_001478598.1 2583982 R 399741 CDS YP_001478599.1 157370610 5602943 complement(2585242..2586315) 1 NC_009832.1 KEGG: eca:ECA1405 putative exported protein; hypothetical protein 2586315 5602943 Spro_2370 Serratia proteamaculans 568 hypothetical protein YP_001478599.1 2585242 R 399741 CDS YP_001478600.1 157370611 5602903 2586539..2587627 1 NC_009832.1 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2587627 5602903 Spro_2371 Serratia proteamaculans 568 hypothetical protein YP_001478600.1 2586539 D 399741 CDS YP_001478601.1 157370612 5602904 complement(2587670..2588689) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: ppu:PP_2986 oxidoreductase, putative; NAD-dependent epimerase/dehydratase 2588689 5602904 Spro_2372 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001478601.1 2587670 R 399741 CDS YP_001478602.1 157370613 5602905 2588814..2589431 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B1225 transcriptional regulator, TetR family; TetR family transcriptional regulator 2589431 5602905 Spro_2373 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478602.1 2588814 D 399741 CDS YP_001478603.1 157370614 5602851 complement(2589439..2590860) 1 NC_009832.1 hypothetical protein 2590860 5602851 Spro_2374 Serratia proteamaculans 568 hypothetical protein YP_001478603.1 2589439 R 399741 CDS YP_001478604.1 157370615 5602852 complement(2590841..2592757) 1 NC_009832.1 hypothetical protein 2592757 5602852 Spro_2375 Serratia proteamaculans 568 hypothetical protein YP_001478604.1 2590841 R 399741 CDS YP_001478605.1 157370616 5602853 complement(2592768..2594432) 1 NC_009832.1 KEGG: rru:Rru_A1375 hypothetical protein; hypothetical protein 2594432 5602853 Spro_2376 Serratia proteamaculans 568 hypothetical protein YP_001478605.1 2592768 R 399741 CDS YP_001478606.1 157370617 5602758 complement(2594442..2596277) 1 NC_009832.1 hypothetical protein 2596277 5602758 Spro_2377 Serratia proteamaculans 568 hypothetical protein YP_001478606.1 2594442 R 399741 CDS YP_001478607.1 157370618 5602759 complement(2596344..2598485) 1 NC_009832.1 KEGG: rru:Rru_A1377 hypothetical protein; hypothetical protein 2598485 5602759 Spro_2378 Serratia proteamaculans 568 hypothetical protein YP_001478607.1 2596344 R 399741 CDS YP_001478608.1 157370619 5602760 complement(2598507..2599931) 1 NC_009832.1 hypothetical protein 2599931 5602760 Spro_2379 Serratia proteamaculans 568 hypothetical protein YP_001478608.1 2598507 R 399741 CDS YP_001478609.1 157370620 5602680 complement(2599928..2601679) 1 NC_009832.1 hypothetical protein 2601679 5602680 Spro_2380 Serratia proteamaculans 568 hypothetical protein YP_001478609.1 2599928 R 399741 CDS YP_001478610.1 157370621 5602681 complement(2601683..2603284) 1 NC_009832.1 SMART: Hedgehog/intein hint domain protein; KEGG: plu:plu1731 hypothetical protein; hedgehog/intein hint domain-containing protein 2603284 5602681 Spro_2381 Serratia proteamaculans 568 hedgehog/intein hint domain-containing protein YP_001478610.1 2601683 R 399741 CDS YP_001478611.1 157370622 5602682 complement(2603374..2603790) 1 NC_009832.1 hypothetical protein 2603790 5602682 Spro_2382 Serratia proteamaculans 568 hypothetical protein YP_001478611.1 2603374 R 399741 CDS YP_001478612.1 157370623 5602601 complement(2604484..2604678) 1 NC_009832.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: csa:Csal_1436 helix-turn-helix protein, CopG; CopG/DNA-binding domain-containing protein 2604678 5602601 Spro_2383 Serratia proteamaculans 568 CopG/DNA-binding domain-containing protein YP_001478612.1 2604484 R 399741 CDS YP_001478613.1 157370624 5602602 complement(2604735..2605523) 1 NC_009832.1 KEGG: maq:Maqu_2906 conserved hypothetical spermidine synthase; spermidine synthase-like protein 2605523 5602602 Spro_2384 Serratia proteamaculans 568 spermidine synthase-like protein YP_001478613.1 2604735 R 399741 CDS YP_001478614.1 157370625 5602603 complement(2605560..2606015) 1 NC_009832.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: asa:ASA_3149 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 2606015 5602603 Spro_2385 Serratia proteamaculans 568 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001478614.1 2605560 R 399741 CDS YP_001478615.1 157370626 5602552 complement(2606268..2606762) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ecc:c3738 hypothetical protein; hypothetical protein 2606762 5602552 Spro_2386 Serratia proteamaculans 568 hypothetical protein YP_001478615.1 2606268 R 399741 CDS YP_001478616.1 157370627 5602553 2607072..2608544 1 NC_009832.1 KEGG: eca:ECA2785 metalloprotease; PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; Peptidase M10 serralysin; SMART: peptidase metallopeptidase; serralysin 2608544 5602553 Spro_2387 Serratia proteamaculans 568 serralysin YP_001478616.1 2607072 D 399741 CDS YP_001478617.1 157370628 5602554 complement(2608589..2610058) 1 NC_009832.1 PFAM: membrane attack complex component/perforin/complement C9; KEGG: cmi:CMM_2382 hypothetical protein, putative perforin; membrane attack complex component/perforin/complement C9 2610058 5602554 Spro_2388 Serratia proteamaculans 568 membrane attack complex component/perforin/complement C9 YP_001478617.1 2608589 R 399741 CDS YP_001478618.1 157370629 5602546 complement(2610593..2611024) 1 NC_009832.1 KEGG: ecv:APECO1_2952 arsenate reductase ArsC; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 2611024 5602546 Spro_2389 Serratia proteamaculans 568 arsenate reductase YP_001478618.1 2610593 R 399741 CDS YP_001478619.1 157370630 5602547 complement(2611037..2612326) 1 NC_009832.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ent:Ent638_4256 arsenical pump membrane protein; arsenical pump membrane protein 2612326 5602547 Spro_2390 Serratia proteamaculans 568 arsenical pump membrane protein YP_001478619.1 2611037 R 399741 CDS YP_001478620.1 157370631 5602548 complement(2612372..2612692) 1 NC_009832.1 regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR 2612692 5602548 Spro_2391 Serratia proteamaculans 568 DNA-binding transcriptional repressor ArsR YP_001478620.1 2612372 R 399741 CDS YP_001478621.1 157370632 5602531 complement(2612844..2614802) 1 NC_009832.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: psp:PSPPH_2337 sigma-54 dependent transcriptional regulator; PAS modulated sigma54 specific transcriptional regulator 2614802 5602531 Spro_2392 Serratia proteamaculans 568 PAS modulated sigma54 specific transcriptional regulator YP_001478621.1 2612844 R 399741 CDS YP_001478622.1 157370633 5602532 2614995..2616011 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: pst:PSPTO_3047 myo-inositol 2-dehydrogenase, putative; inositol 2-dehydrogenase 2616011 5602532 Spro_2393 Serratia proteamaculans 568 inositol 2-dehydrogenase YP_001478622.1 2614995 D 399741 CDS YP_001478623.1 157370634 5602533 2616011..2616790 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: psp:PSPPH_2335 AP endonuclease, family 2 superfamily; xylose isomerase domain-containing protein 2616790 5602533 Spro_2394 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001478623.1 2616011 D 399741 CDS YP_001478624.1 157370635 5602506 2616884..2617807 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kpn:KPN_00509 putative periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 2617807 5602506 Spro_2395 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001478624.1 2616884 D 399741 CDS YP_001478625.1 157370636 5602507 2618011..2618772 1 NC_009832.1 PFAM: amidinotransferase; KEGG: yen:YE2045 putative hydrolase; dimethylargininase 2618772 5602507 Spro_2396 Serratia proteamaculans 568 dimethylargininase YP_001478625.1 2618011 D 399741 CDS YP_001478626.1 157370637 5607436 2618800..2619573 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE2044 amino acid-binding periplasmic protein precursor; extracellular solute-binding protein 2619573 5607436 Spro_2397 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478626.1 2618800 D 399741 CDS YP_001478627.1 157370638 5607437 2619610..2620302 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2043 amino acid transport system permease protein; polar amino acid ABC transporter inner membrane subunit 2620302 5607437 Spro_2398 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001478627.1 2619610 D 399741 CDS YP_001478628.1 157370639 5607438 2620302..2621024 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_3087 histidine transport system membrane protein M; polar amino acid ABC transporter inner membrane subunit 2621024 5607438 Spro_2399 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001478628.1 2620302 D 399741 CDS YP_001478629.1 157370640 5602856 complement(2621031..2621486) 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: yen:YE2040 probable leucine-responsive regulatory protein; AsnC family transcriptional regulator 2621486 5602856 Spro_2400 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001478629.1 2621031 R 399741 CDS YP_001478630.1 157370641 5602857 2621501..2622607 1 NC_009832.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: yen:YE2039 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 2622607 5602857 Spro_2401 Serratia proteamaculans 568 succinylglutamate desuccinylase/aspartoacylase YP_001478630.1 2621501 D 399741 CDS YP_001478631.1 157370642 5602858 2622924..2624678 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_0009 ABC transporter related; ABC transporter-like protein 2624678 5602858 Spro_2402 Serratia proteamaculans 568 ABC transporter-like protein YP_001478631.1 2622924 D 399741 CDS YP_001478632.1 157370643 5604475 2625325..2626338 1 NC_009832.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 2626338 5604475 Spro_2403 Serratia proteamaculans 568 alcohol dehydrogenase YP_001478632.1 2625325 D 399741 CDS YP_001478633.1 157370644 5604476 complement(2626393..2626875) 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: gme:Gmet_2158 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2626875 5604476 Spro_2404 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001478633.1 2626393 R 399741 CDS YP_001478634.1 157370645 5604477 complement(2626940..2627515) 1 NC_009832.1 hypothetical protein 2627515 5604477 Spro_2405 Serratia proteamaculans 568 hypothetical protein YP_001478634.1 2626940 R 399741 CDS YP_001478635.1 157370646 5603643 complement(2627530..2629968) 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: bch:Bcen2424_1755 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 2629968 5603643 Spro_2406 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001478635.1 2627530 R 399741 CDS YP_001478636.1 157370647 5603644 complement(2629979..2630683) 1 NC_009832.1 member of the periplasmic pilus chaperone family of proteins; putative periplasmic chaperone protein 2630683 5603644 Spro_2407 Serratia proteamaculans 568 putative periplasmic chaperone protein YP_001478636.1 2629979 R 399741 CDS YP_001478637.1 157370648 5603645 complement(2630786..2631538) 1 NC_009832.1 PFAM: protein of unknown function DUF1120; KEGG: bch:Bcen2424_1753 protein of unknown function DUF1120; hypothetical protein 2631538 5603645 Spro_2408 Serratia proteamaculans 568 hypothetical protein YP_001478637.1 2630786 R 399741 CDS YP_001478638.1 157370649 5602588 complement(2631924..2632517) 1 NC_009832.1 PFAM: integrase family protein; KEGG: ecv:APECO1_1681 hypothetical protein; integrase family protein 2632517 5602588 Spro_2409 Serratia proteamaculans 568 integrase family protein YP_001478638.1 2631924 R 399741 CDS YP_001478639.1 157370650 5602589 complement(2632638..2634158) 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: pae:PA4022 probable aldehyde dehydrogenase; aldehyde dehydrogenase 2634158 5602589 Spro_2410 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001478639.1 2632638 R 399741 CDS YP_001478640.1 157370651 5602590 2634438..2636225 1 NC_009832.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: kpn:KPN_02992 putative helix-turn-helix, fis-type; Fis family GAF modulated sigma54 specific transcriptional regulator 2636225 5602590 Spro_2411 Serratia proteamaculans 568 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001478640.1 2634438 D 399741 CDS YP_001478641.1 157370652 5603154 complement(2636269..2637195) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: eca:ECA2156 ABC transporter, substrate binding protein; extracellular solute-binding protein 2637195 5603154 Spro_2412 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478641.1 2636269 R 399741 CDS YP_001478642.1 157370653 5603155 complement(2637345..2639867) 1 NC_009832.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: atc:AGR_C_2202 copper-transporting ATPase; heavy metal translocating P-type ATPase 2639867 5603155 Spro_2413 Serratia proteamaculans 568 heavy metal translocating P-type ATPase YP_001478642.1 2637345 R 399741 CDS YP_001478643.1 157370654 5603156 complement(2639927..2642020) 1 NC_009832.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: acb:A1S_1949 putative diguanylate cyclase/phosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2642020 5603156 Spro_2414 Serratia proteamaculans 568 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001478643.1 2639927 R 399741 CDS YP_001478644.1 157370655 5603209 complement(2642299..2644734) 1 NC_009832.1 PFAM: Pyrrolo-quinoline quinone; KEGG: atc:AGR_L_2936 probable quinate dehydrogenase; Pyrrolo-quinoline quinone 2644734 5603209 Spro_2415 Serratia proteamaculans 568 Pyrrolo-quinoline quinone YP_001478644.1 2642299 R 399741 CDS YP_001478645.1 157370656 5603210 2645132..2646649 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: atu:Atu2171 hydrolase; TAP domain-containing protein 2646649 5603210 Spro_2416 Serratia proteamaculans 568 TAP domain-containing protein YP_001478645.1 2645132 D 399741 CDS YP_001478646.1 157370657 5603211 complement(2646923..2647843) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_03313 putative bacterial regulatory protein, LysR; LysR family transcriptional regulator 2647843 5603211 Spro_2417 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478646.1 2646923 R 399741 CDS YP_001478647.1 157370658 5603793 complement(2647945..2649417) 1 NC_009832.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: eca:ECA2244 L-2,4-diaminobutyrate decarboxylase; pyridoxal-dependent decarboxylase 2649417 5603793 Spro_2418 Serratia proteamaculans 568 pyridoxal-dependent decarboxylase YP_001478647.1 2647945 R 399741 CDS YP_001478648.1 157370659 5603794 complement(2649423..2650817) 1 NC_009832.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 2650817 5603794 Spro_2419 Serratia proteamaculans 568 diaminobutyrate--2-oxoglutarate aminotransferase YP_001478648.1 2649423 R 399741 CDS YP_001478649.1 157370660 5603795 2651424..2653298 1 NC_009832.1 KEGG: aha:AHA_3686 histidine kinase-response regulator hybrid protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2653298 5603795 Spro_2420 Serratia proteamaculans 568 PAS/PAC sensor-containing diguanylate cyclase YP_001478649.1 2651424 D 399741 CDS YP_001478650.1 157370661 5604622 complement(2653376..2653708) 1 NC_009832.1 hypothetical protein 2653708 5604622 Spro_2421 Serratia proteamaculans 568 hypothetical protein YP_001478650.1 2653376 R 399741 CDS YP_001478651.1 157370662 5604623 complement(2654251..2655282) 1 NC_009832.1 TIGRFAM: high-affinity nickel-transporter; KEGG: plu:plu2170 putative high-affinity nickel-transport protein; high-affinity nickel-transporter 2655282 5604623 Spro_2422 Serratia proteamaculans 568 high-affinity nickel-transporter YP_001478651.1 2654251 R 399741 CDS YP_001478652.1 157370663 5604624 complement(2655284..2657581) 1 NC_009832.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: yen:YE3600 hydrogenase maturation protein; (NiFe) hydrogenase maturation protein HypF 2657581 5604624 Spro_2423 Serratia proteamaculans 568 (NiFe) hydrogenase maturation protein HypF YP_001478652.1 2655284 R 399741 CDS YP_001478653.1 157370664 5604112 complement(2657681..2659837) 1 NC_009832.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: kpn:KPN_02090 formate dehydrogenase H, selenopolypeptide subunit; formate dehydrogenase subunit alpha 2659837 5604112 Spro_2424 Serratia proteamaculans 568 formate dehydrogenase subunit alpha YP_001478653.1 2657681 R 399741 CDS YP_001478654.1 157370665 5604113 complement(2659849..2660391) 1 NC_009832.1 involved in electron transport from formate to hydrogen; electron transport protein HydN 2660391 5604113 Spro_2425 Serratia proteamaculans 568 electron transport protein HydN YP_001478654.1 2659849 R 399741 CDS YP_001478655.1 157370666 5604114 complement(2660554..2661024) 1 NC_009832.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 2661024 hycI 5604114 hycI Serratia proteamaculans 568 hydrogenase 3 maturation protease YP_001478655.1 2660554 R 399741 CDS YP_001478656.1 157370667 5602785 complement(2661017..2661433) 1 NC_009832.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: kpn:KPN_03055 processing of HycE (part of the FHL complex); formate hydrogenlyase maturation HycH 2661433 5602785 Spro_2427 Serratia proteamaculans 568 formate hydrogenlyase maturation HycH YP_001478656.1 2661017 R 399741 CDS YP_001478657.1 157370668 5602786 complement(2661430..2662227) 1 NC_009832.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ent:Ent638_3192 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 2662227 5602786 Spro_2428 Serratia proteamaculans 568 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001478657.1 2661430 R 399741 CDS YP_001478658.1 157370669 5602787 complement(2662224..2662769) 1 NC_009832.1 electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; formate hydrogenlyase complex iron-sulfur subunit 2662769 5602787 Spro_2429 Serratia proteamaculans 568 formate hydrogenlyase complex iron-sulfur subunit YP_001478658.1 2662224 R 399741 CDS YP_001478659.1 157370670 5606833 complement(2662782..2664485) 1 NC_009832.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: stm:STM2849 hydrogenase 3 large subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 2664485 5606833 Spro_2430 Serratia proteamaculans 568 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_001478659.1 2662782 R 399741 CDS YP_001478660.1 157370671 5606834 complement(2664508..2665443) 1 NC_009832.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: kpn:KPN_03059 hydrogenase 3, membrane subunit (part of FHL complex); respiratory-chain NADH dehydrogenase subunit 1 2665443 5606834 Spro_2431 Serratia proteamaculans 568 respiratory-chain NADH dehydrogenase subunit 1 YP_001478660.1 2664508 R 399741 CDS YP_001478661.1 157370672 5606835 complement(2665454..2667322) 1 NC_009832.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: spt:SPA2709 NADH dehydrogenase subunit N; NADH dehydrogenase (quinone) 2667322 5606835 Spro_2432 Serratia proteamaculans 568 NADH dehydrogenase (quinone) YP_001478661.1 2665454 R 399741 CDS YP_001478662.1 157370673 5604543 complement(2667322..2667936) 1 NC_009832.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: stm:STM2852 hydrogenase-3 iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2667936 5604543 Spro_2433 Serratia proteamaculans 568 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001478662.1 2667322 R 399741 CDS YP_001478663.1 157370674 5604544 complement(2668024..2668491) 1 NC_009832.1 regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; formate hydrogenlyase regulatory protein HycA 2668491 5604544 Spro_2434 Serratia proteamaculans 568 formate hydrogenlyase regulatory protein HycA YP_001478663.1 2668024 R 399741 CDS YP_001478664.1 157370675 5604148 2668754..2669098 1 NC_009832.1 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 2669098 hypA 5604148 hypA Serratia proteamaculans 568 hydrogenase nickel incorporation protein YP_001478664.1 2668754 D 399741 CDS YP_001478665.1 157370676 5604149 2669114..2669908 1 NC_009832.1 GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 2669908 5604149 Spro_2436 Serratia proteamaculans 568 hydrogenase nickel incorporation protein HypB YP_001478665.1 2669114 D 399741 CDS YP_001478666.1 157370677 5604150 2669899..2670192 1 NC_009832.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: yen:YE2796 putative hydrogenase isoenzymes formation protein; hydrogenase assembly chaperone HypC/HupF 2670192 5604150 Spro_2437 Serratia proteamaculans 568 hydrogenase assembly chaperone HypC/HupF YP_001478666.1 2669899 D 399741 CDS YP_001478667.1 157370678 5602467 2670179..2671306 1 NC_009832.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: yen:YE3602 hydrogenase isoenzymes formation protein; hydrogenase expression/formation protein HypD 2671306 5602467 Spro_2438 Serratia proteamaculans 568 hydrogenase expression/formation protein HypD YP_001478667.1 2670179 D 399741 CDS YP_001478668.1 157370679 5602468 2671303..2672316 1 NC_009832.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: sec:SC2791 putative hydrogenase expression/formation protein; hydrogenase expression/formation protein HypE 2672316 5602468 Spro_2439 Serratia proteamaculans 568 hydrogenase expression/formation protein HypE YP_001478668.1 2671303 D 399741 CDS YP_001478669.1 157370680 5602469 2672407..2674473 1 NC_009832.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbo:SBO_2789 formate hydrogen-lyase transcriptional activator for FdhF, hyc and hyp operons; NifA subfamily transcriptional regulator 2674473 5602469 Spro_2440 Serratia proteamaculans 568 NifA subfamily transcriptional regulator YP_001478669.1 2672407 D 399741 CDS YP_001478670.1 157370681 5602558 complement(2674548..2674787) 1 NC_009832.1 KEGG: sgl:SGP2_0007 hypothetical protein; hypothetical protein 2674787 5602558 Spro_2441 Serratia proteamaculans 568 hypothetical protein YP_001478670.1 2674548 R 399741 CDS YP_001478671.1 157370682 5602559 complement(2674784..2675758) 1 NC_009832.1 KEGG: pst:PSPTO_2895 hypothetical protein; hypothetical protein 2675758 5602559 Spro_2442 Serratia proteamaculans 568 hypothetical protein YP_001478671.1 2674784 R 399741 CDS YP_001478672.1 157370683 5602560 2675997..2677490 1 NC_009832.1 KEGG: pfl:PFL_2568 sensory box transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; LuxR family transcriptional regulator 2677490 5602560 Spro_2443 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001478672.1 2675997 D 399741 CDS YP_001478673.1 157370684 5602609 2677740..2678636 1 NC_009832.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: aor:AO090102000042 predicted iron-dependent peroxidase; Dyp-type peroxidase family protein 2678636 5602609 Spro_2444 Serratia proteamaculans 568 Dyp-type peroxidase family protein YP_001478673.1 2677740 D 399741 CDS YP_001478674.1 157370685 5602610 2678758..2679075 1 NC_009832.1 KEGG: cvi:CV_2052 hypothetical protein; hypothetical protein 2679075 5602610 Spro_2445 Serratia proteamaculans 568 hypothetical protein YP_001478674.1 2678758 D 399741 CDS YP_001478675.1 157370686 5602611 2679446..2679970 1 NC_009832.1 PFAM: protein of unknown function DUF336; KEGG: mpt:Mpe_A1588 hypothetical protein; hypothetical protein 2679970 5602611 Spro_2446 Serratia proteamaculans 568 hypothetical protein YP_001478675.1 2679446 D 399741 CDS YP_001478676.1 157370687 5602646 2680239..2680607 1 NC_009832.1 KEGG: aau:AAur_1002 putative RNase H; putative RNase H 2680607 5602646 Spro_2447 Serratia proteamaculans 568 putative RNase H YP_001478676.1 2680239 D 399741 CDS YP_001478677.1 157370688 5602647 complement(2680856..2681269) 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: mms:mma_2565 MutT/NUDIX-family hydrolase; NUDIX hydrolase 2681269 5602647 Spro_2448 Serratia proteamaculans 568 NUDIX hydrolase YP_001478677.1 2680856 R 399741 CDS YP_001478678.1 157370689 5602648 2681446..2682501 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3588 oxidase; FAD dependent oxidoreductase 2682501 5602648 Spro_2449 Serratia proteamaculans 568 FAD dependent oxidoreductase YP_001478678.1 2681446 D 399741 CDS YP_001478679.1 157370690 5602809 complement(2682554..2683891) 1 NC_009832.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; permease DsdX 2683891 5602809 Spro_2450 Serratia proteamaculans 568 permease DsdX YP_001478679.1 2682554 R 399741 CDS YP_001478680.1 157370691 5602810 2684098..2685033 1 NC_009832.1 regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 2685033 5602810 Spro_2451 Serratia proteamaculans 568 DNA-binding transcriptional regulator DsdC YP_001478680.1 2684098 D 399741 CDS YP_001478681.1 157370692 5602811 complement(2684993..2685958) 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSp0505 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2685958 5602811 Spro_2452 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001478681.1 2684993 R 399741 CDS YP_001478682.1 157370693 5602815 2686301..2686768 1 NC_009832.1 KEGG: plu:plu3520 hypothetical protein; hypothetical protein 2686768 5602815 Spro_2453 Serratia proteamaculans 568 hypothetical protein YP_001478682.1 2686301 D 399741 CDS YP_001478683.1 157370694 5602816 2687015..2689069 1 NC_009832.1 TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: plu:plu3519 unnamed protein product; highly similar to outer membrane receptor protein; TonB-dependent copper receptor 2689069 5602816 Spro_2454 Serratia proteamaculans 568 TonB-dependent copper receptor YP_001478683.1 2687015 D 399741 CDS YP_001478684.1 157370695 5602817 complement(2689145..2690032) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0049 transcriptional regulator, LysR family; LysR family transcriptional regulator 2690032 5602817 Spro_2455 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478684.1 2689145 R 399741 CDS YP_001478685.1 157370696 5602887 2690264..2691460 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_0048 major facilitator superfamily MFS_1; major facilitator transporter 2691460 5602887 Spro_2456 Serratia proteamaculans 568 major facilitator transporter YP_001478685.1 2690264 D 399741 CDS YP_001478686.1 157370697 5602888 2691486..2692499 1 NC_009832.1 KEGG: ent:Ent638_0047 conserved hypothetical signal peptide protein; putative signal peptide protein 2692499 5602888 Spro_2457 Serratia proteamaculans 568 putative signal peptide protein YP_001478686.1 2691486 D 399741 CDS YP_001478687.1 157370698 5602889 2692646..2693629 1 NC_009832.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: stm:STM1609 TDT family, K+-tellurite ethidium and proflavin transport protein; potassium-tellurite ethidium and proflavin transporter 2693629 5602889 Spro_2458 Serratia proteamaculans 568 potassium-tellurite ethidium and proflavin transporter YP_001478687.1 2692646 D 399741 CDS YP_001478688.1 157370699 5602932 complement(2693633..2694529) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_A0260 transcriptional regulator, LysR family; LysR family transcriptional regulator 2694529 5602932 Spro_2459 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478688.1 2693633 R 399741 CDS YP_001478689.1 157370700 5602933 2694616..2695392 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: bxe:Bxe_B2110 NAD(P)H dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase (quinone) 2695392 5602933 Spro_2460 Serratia proteamaculans 568 ribosyldihydronicotinamide dehydrogenase (quinone) YP_001478689.1 2694616 D 399741 CDS YP_001478690.1 157370701 5602934 complement(2695427..2696881) 1 NC_009832.1 PFAM: FAD linked oxidase domain protein; KEGG: ecv:APECO1_3760 putative FAD containing dehydrogenase; alkylglycerone-phosphate synthase 2696881 5602934 Spro_2461 Serratia proteamaculans 568 alkylglycerone-phosphate synthase YP_001478690.1 2695427 R 399741 CDS YP_001478691.1 157370702 5602950 complement(2696950..2697735) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ecs:ECs3630 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 2697735 5602950 Spro_2462 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001478691.1 2696950 R 399741 CDS YP_001478692.1 157370703 5602951 2698117..2699400 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW2746 predicted transporter; major facilitator transporter 2699400 5602951 Spro_2463 Serratia proteamaculans 568 major facilitator transporter YP_001478692.1 2698117 D 399741 CDS YP_001478693.1 157370704 5602952 2699426..2700871 1 NC_009832.1 PFAM: carbohydrate kinase FGGY; KEGG: ecv:APECO1_3757 putative sugar kinase YgcE; carbohydrate kinase FGGY 2700871 5602952 Spro_2464 Serratia proteamaculans 568 carbohydrate kinase FGGY YP_001478693.1 2699426 D 399741 CDS YP_001478694.1 157370705 5602959 complement(2700872..2701441) 1 NC_009832.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ecs:ECs3623 putative anti-terminator regulatory protein; glycerol-3-phosphate responsive antiterminator GlpP 2701441 5602959 Spro_2465 Serratia proteamaculans 568 glycerol-3-phosphate responsive antiterminator GlpP YP_001478694.1 2700872 R 399741 CDS YP_001478695.1 157370706 5602960 complement(2701535..2702452) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yps:YPTB2501 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 2702452 5602960 Spro_2466 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478695.1 2701535 R 399741 CDS YP_001478696.1 157370707 5602961 2702693..2704054 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ypp:YPDSF_1874 transporter protein; major facilitator transporter 2704054 5602961 Spro_2467 Serratia proteamaculans 568 major facilitator transporter YP_001478696.1 2702693 D 399741 CDS YP_001478697.1 157370708 5602967 2704085..2704588 1 NC_009832.1 PFAM: Formaldehyde-activating enzyme (Fae); KEGG: ypi:YpsIP31758_1542 hypothetical protein; formaldehyde-activating protein 2704588 5602967 Spro_2468 Serratia proteamaculans 568 formaldehyde-activating protein YP_001478697.1 2704085 D 399741 CDS YP_001478698.1 157370709 5602968 2704599..2705645 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: ypi:YpsIP31758_1541 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 2705645 5602968 Spro_2469 Serratia proteamaculans 568 aldo/keto reductase YP_001478698.1 2704599 D 399741 CDS YP_001478699.1 157370710 5602969 2705642..2707093 1 NC_009832.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE3793 succinate-semialdehyde dehydrogenase; succinic semialdehyde dehydrogenase 2707093 5602969 Spro_2470 Serratia proteamaculans 568 succinic semialdehyde dehydrogenase YP_001478699.1 2705642 D 399741 CDS YP_001478700.1 157370711 5602976 complement(2707065..2708030) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: pfl:PFL_3482 transcriptional regulator, MarR family/acetyl transferase, GNAT family; MarR family transcriptional regulator 2708030 5602976 Spro_2471 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001478700.1 2707065 R 399741 CDS YP_001478701.1 157370712 5602977 complement(2708142..2709599) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: plu:plu3105 unnamed protein product; similar to D-serine/D-alanine/glycine transporter; amino acid permease-associated protein 2709599 5602977 Spro_2472 Serratia proteamaculans 568 amino acid permease-associated protein YP_001478701.1 2708142 R 399741 CDS YP_001478702.1 157370713 5602978 2710219..2711493 1 NC_009832.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: kpn:KPN_01492 putative glutamic dehyrogenase-like protein; Glu/Leu/Phe/Val dehydrogenase 2711493 5602978 Spro_2473 Serratia proteamaculans 568 Glu/Leu/Phe/Val dehydrogenase YP_001478702.1 2710219 D 399741 CDS YP_001478703.1 157370714 5602999 complement(2711550..2713118) 1 NC_009832.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro03779 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 2713118 5602999 Spro_2474 Serratia proteamaculans 568 AMP-dependent synthetase and ligase YP_001478703.1 2711550 R 399741 CDS YP_001478704.1 157370715 5603000 2713304..2713873 1 NC_009832.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: kpn:KPN_01321 putative intracellular protease/amidase; PfpI family intracellular peptidase 2713873 5603000 Spro_2475 Serratia proteamaculans 568 PfpI family intracellular peptidase YP_001478704.1 2713304 D 399741 CDS YP_001478705.1 157370716 5603001 complement(2713959..2714336) 1 NC_009832.1 PFAM: protein of unknown function DUF1493; hypothetical protein 2714336 5603001 Spro_2476 Serratia proteamaculans 568 hypothetical protein YP_001478705.1 2713959 R 399741 CDS YP_001478706.1 157370717 5603002 complement(2714519..2715973) 1 NC_009832.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE0445 probable outer membrane efflux lipoprotein; RND efflux system outer membrane lipoprotein 2715973 5603002 Spro_2477 Serratia proteamaculans 568 RND efflux system outer membrane lipoprotein YP_001478706.1 2714519 R 399741 CDS YP_001478707.1 157370718 5603003 complement(2715975..2719130) 1 NC_009832.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE0444 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2719130 5603003 Spro_2478 Serratia proteamaculans 568 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001478707.1 2715975 R 399741 CDS YP_001478708.1 157370719 5603004 complement(2719133..2720287) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypi:YpsIP31758_3586 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2720287 5603004 Spro_2479 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001478708.1 2719133 R 399741 CDS YP_001478709.1 157370720 5603008 complement(2720436..2721950) 1 NC_009832.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_0043 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 2721950 5603008 Spro_2480 Serratia proteamaculans 568 EmrB/QacA family drug resistance transporter YP_001478709.1 2720436 R 399741 CDS YP_001478710.1 157370721 5603009 2721994..2722689 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1778 transcriptional regulator, TetR family; TetR family transcriptional regulator 2722689 5603009 Spro_2481 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478710.1 2721994 D 399741 CDS YP_001478711.1 157370722 5603010 complement(2722727..2723854) 1 NC_009832.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pen:PSEEN4632 peptidylarginine deiminase, PPADH family; agmatine deiminase 2723854 5603010 Spro_2482 Serratia proteamaculans 568 agmatine deiminase YP_001478711.1 2722727 R 399741 CDS YP_001478712.1 157370723 5603107 2724002..2724865 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_2369 transcriptional regulator, LysR family; LysR family transcriptional regulator 2724865 5603107 Spro_2483 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478712.1 2724002 D 399741 CDS YP_001478713.1 157370724 5603108 2725018..2726691 1 NC_009832.1 KEGG: pap:PSPA7_4047 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2726691 5603108 Spro_2484 Serratia proteamaculans 568 gamma-glutamyltransferase YP_001478713.1 2725018 D 399741 CDS YP_001478714.1 157370725 5603394 complement(2726739..2728682) 1 NC_009832.1 KEGG: xcb:XC_2212 hypothetical protein; hypothetical protein 2728682 5603394 Spro_2485 Serratia proteamaculans 568 hypothetical protein YP_001478714.1 2726739 R 399741 CDS YP_001478715.1 157370726 5603395 2728857..2729414 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_0714 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 2729414 5603395 Spro_2486 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001478715.1 2728857 D 399741 CDS YP_001478716.1 157370727 5603396 complement(2729425..2729994) 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: eca:ECA3650 putative DNA-binding protein; XRE family transcriptional regulator 2729994 5603396 Spro_2487 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001478716.1 2729425 R 399741 CDS YP_001478717.1 157370728 5603431 2730124..2731038 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA3651 hypothetical protein; hypothetical protein 2731038 5603431 Spro_2488 Serratia proteamaculans 568 hypothetical protein YP_001478717.1 2730124 D 399741 CDS YP_001478718.1 157370729 5603432 complement(2731288..2732058) 1 NC_009832.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: shn:Shewana3_4234 transposase, IS605 OrfB family; IS605 family transposase OrfB 2732058 5603432 Spro_2489 Serratia proteamaculans 568 IS605 family transposase OrfB YP_001478718.1 2731288 R 399741 CDS YP_001478719.1 157370730 5603433 complement(2732434..2733732) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: pae:PA1600 probable cytochrome c; gluconate 2-dehydrogenase 2733732 5603433 Spro_2490 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001478719.1 2732434 R 399741 CDS YP_001478720.1 157370731 5603516 complement(2733729..2736014) 1 NC_009832.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pae:PA1601 probable aldehyde dehydrogenase; aldehyde oxidase and xanthine dehydrogenase 2736014 5603516 Spro_2491 Serratia proteamaculans 568 aldehyde oxidase and xanthine dehydrogenase YP_001478720.1 2733729 R 399741 CDS YP_001478721.1 157370732 5603517 complement(2736011..2736484) 1 NC_009832.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pau:PA14_43780 putative oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2736484 5603517 Spro_2492 Serratia proteamaculans 568 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001478721.1 2736011 R 399741 CDS YP_001478722.1 157370733 5603518 complement(2736818..2738635) 1 NC_009832.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: azo:azo0369 probable cysteine desulphurase; SufS subfamily cysteine desulfurase 2738635 5603518 Spro_2493 Serratia proteamaculans 568 SufS subfamily cysteine desulfurase YP_001478722.1 2736818 R 399741 CDS YP_001478723.1 157370734 5603519 complement(2738610..2739542) 1 NC_009832.1 KEGG: mpt:Mpe_A0024 hypothetical protein; hypothetical protein 2739542 5603519 Spro_2494 Serratia proteamaculans 568 hypothetical protein YP_001478723.1 2738610 R 399741 CDS YP_001478724.1 157370735 5603520 complement(2739707..2740477) 1 NC_009832.1 KEGG: mpt:Mpe_A0026 serine O-acetyltransferase; Serine O-acetyltransferase 2740477 5603520 Spro_2495 Serratia proteamaculans 568 Serine O-acetyltransferase YP_001478724.1 2739707 R 399741 CDS YP_001478725.1 157370736 5603521 complement(2740722..2741186) 1 NC_009832.1 SMART: Rhodanese domain protein; KEGG: mpt:Mpe_A0027 hypothetical protein; rhodanese domain-containing protein 2741186 5603521 Spro_2496 Serratia proteamaculans 568 rhodanese domain-containing protein YP_001478725.1 2740722 R 399741 CDS YP_001478726.1 157370737 5603596 2741548..2742498 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ypp:YPDSF_1946 D-isomer specific 2-hydroxyacid dehydrogenase family protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2742498 5603596 Spro_2497 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001478726.1 2741548 D 399741 CDS YP_001478727.1 157370738 5603597 2742592..2743899 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yps:YPTB2567 putative 2-ketogluconate transporter, ACS family-MFS superfamily; major facilitator transporter 2743899 5603597 Spro_2498 Serratia proteamaculans 568 major facilitator transporter YP_001478727.1 2742592 D 399741 CDS YP_001478728.1 157370739 5603598 2743990..2744724 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE1415 putative LacI-family regulatory protein; RpiR family transcriptional regulator 2744724 5603598 Spro_2499 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001478728.1 2743990 D 399741 CDS YP_001478729.1 157370740 5603658 2744848..2746284 1 NC_009832.1 PFAM: glycoside hydrolase family 1; KEGG: yen:YE1417 6-phospho-beta-glucosidase; glycoside hydrolase family protein 2746284 5603658 Spro_2500 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478729.1 2744848 D 399741 CDS YP_001478730.1 157370741 5603659 2747422..2748150 1 NC_009832.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: kpn:KPN_01948 putative oxidoreductase; protocatechuate 3,4-dioxygenase subunit beta 2748150 5603659 Spro_2501 Serratia proteamaculans 568 protocatechuate 3,4-dioxygenase subunit beta YP_001478730.1 2747422 D 399741 CDS YP_001478731.1 157370742 5603660 2748147..2748773 1 NC_009832.1 KEGG: kpn:KPN_01949 intradiol ring-cleavage dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 2748773 5603660 Spro_2502 Serratia proteamaculans 568 protocatechuate 3,4-dioxygenase subunit alpha YP_001478731.1 2748147 D 399741 CDS YP_001478732.1 157370743 5603672 2748819..2749805 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: stm:STM1625 putative transcriptional regulator; LysR family transcriptional regulator 2749805 5603672 Spro_2503 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478732.1 2748819 D 399741 CDS YP_001478733.1 157370744 5603673 complement(2749802..2750191) 1 NC_009832.1 KEGG: kpn:KPN_01543 putative 4-carboxymuconolactone decarboxylase; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase 2750191 5603673 Spro_2504 Serratia proteamaculans 568 4-carboxymuconolactone decarboxylase YP_001478733.1 2749802 R 399741 CDS YP_001478734.1 157370745 5603674 complement(2750184..2751542) 1 NC_009832.1 TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: kpn:KPN_01541 putative fumarate lyase; 3-carboxy-cis,cis-muconate cycloisomerase 2751542 5603674 Spro_2505 Serratia proteamaculans 568 3-carboxy-cis,cis-muconate cycloisomerase YP_001478734.1 2750184 R 399741 CDS YP_001478735.1 157370746 5603699 complement(2751676..2752854) 1 NC_009832.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 2752854 5603699 Spro_2506 Serratia proteamaculans 568 4-hydroxybenzoate 3-monooxygenase YP_001478735.1 2751676 R 399741 CDS YP_001478736.1 157370747 5603700 complement(2752865..2754220) 1 NC_009832.1 TIGRFAM: benzoate transport; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_03917 putative permeases of the major facilitator superfamily; benzoate transport 2754220 5603700 Spro_2507 Serratia proteamaculans 568 benzoate transport YP_001478736.1 2752865 R 399741 CDS YP_001478737.1 157370748 5603701 2754702..2754956 1 NC_009832.1 KEGG: kpn:KPN_01544 hypothetical protein; hypothetical protein 2754956 5603701 Spro_2508 Serratia proteamaculans 568 hypothetical protein YP_001478737.1 2754702 D 399741 CDS YP_001478738.1 157370749 5603781 2755006..2756007 1 NC_009832.1 KEGG: kpn:KPN_04100 hypothetical protein; hypothetical protein 2756007 5603781 Spro_2509 Serratia proteamaculans 568 hypothetical protein YP_001478738.1 2755006 D 399741 CDS YP_001478739.1 157370750 5603782 2756007..2757137 1 NC_009832.1 KEGG: kpn:KPN_04099 putative outer membrane protein; putative outer membrane protein 2757137 5603782 Spro_2510 Serratia proteamaculans 568 putative outer membrane protein YP_001478739.1 2756007 D 399741 CDS YP_001478740.1 157370751 5603783 2757137..2758255 1 NC_009832.1 KEGG: kpn:KPN_01798 hypothetical protein; hypothetical protein 2758255 5603783 Spro_2511 Serratia proteamaculans 568 hypothetical protein YP_001478740.1 2757137 D 399741 CDS YP_001478741.1 157370752 5603787 complement(2758258..2759616) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_00382 general substrate transporter; major facilitator transporter 2759616 5603787 Spro_2512 Serratia proteamaculans 568 major facilitator transporter YP_001478741.1 2758258 R 399741 CDS YP_001478742.1 157370753 5603788 2760046..2760690 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: ent:Ent638_0520 transcriptional regulator, TetR family; TetR family transcriptional regulator 2760690 5603788 Spro_2513 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478742.1 2760046 D 399741 CDS YP_001478743.1 157370754 5603789 2760714..2761547 1 NC_009832.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_01537 putative transcriptional repressor (IclR family); IclR family transcriptional regulator 2761547 5603789 Spro_2514 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001478743.1 2760714 D 399741 CDS YP_001478744.1 157370755 5603827 complement(2761544..2762881) 1 NC_009832.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 2762881 5603827 Spro_2515 Serratia proteamaculans 568 D-serine dehydratase YP_001478744.1 2761544 R 399741 CDS YP_001478745.1 157370756 5603828 complement(2763091..2763561) 1 NC_009832.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: mes:Meso_0138 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 2763561 5603828 Spro_2516 Serratia proteamaculans 568 3-demethylubiquinone-9 3-methyltransferase YP_001478745.1 2763091 R 399741 CDS YP_001478746.1 157370757 5603829 complement(2763574..2763927) 1 NC_009832.1 PFAM: protein of unknown function DUF1428; KEGG: ent:Ent638_0929 protein of unknown function DUF1428; hypothetical protein 2763927 5603829 Spro_2517 Serratia proteamaculans 568 hypothetical protein YP_001478746.1 2763574 R 399741 CDS YP_001478747.1 157370758 5603865 complement(2764041..2765543) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pen:PSEEN2260 diguanylate cyclase (GGDEF) domain; diguanylate cyclase 2765543 5603865 Spro_2518 Serratia proteamaculans 568 diguanylate cyclase YP_001478747.1 2764041 R 399741 CDS YP_001478748.1 157370759 5603866 complement(2765821..2766699) 1 NC_009832.1 KEGG: pdi:BDI_0439 putative glycosyltransferase; putative glycosyltransferase 2766699 5603866 Spro_2519 Serratia proteamaculans 568 putative glycosyltransferase YP_001478748.1 2765821 R 399741 CDS YP_001478749.1 157370760 5603867 complement(2766778..2768055) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0711 aerobactin siderophore biosynthesis protein IucD; L-lysine 6-monooxygenase (NADPH) 2768055 5603867 Spro_2520 Serratia proteamaculans 568 L-lysine 6-monooxygenase (NADPH) YP_001478749.1 2766778 R 399741 CDS YP_001478750.1 157370761 5603871 complement(2768743..2770413) 1 NC_009832.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pin:Ping_2381 alpha-D-1,4-glucosidase; alpha amylase catalytic region 2770413 5603871 Spro_2521 Serratia proteamaculans 568 alpha amylase catalytic region YP_001478750.1 2768743 R 399741 CDS YP_001478751.1 157370762 5603872 complement(2770435..2771610) 1 NC_009832.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc2140 probable sugar ATP-binding ABC transporter protein; ABC transporter-like protein 2771610 5603872 Spro_2522 Serratia proteamaculans 568 ABC transporter-like protein YP_001478751.1 2770435 R 399741 CDS YP_001478752.1 157370763 5603873 complement(2771616..2772977) 1 NC_009832.1 PFAM: glycoside hydrolase family 4; KEGG: mag:amb2735 alpha-galactosidase/6-phospho-beta-glucosidase; glycoside hydrolase family protein 2772977 5603873 Spro_2523 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478752.1 2771616 R 399741 CDS YP_001478753.1 157370764 5603886 complement(2773009..2773854) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0306 sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 2773854 5603886 Spro_2524 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478753.1 2773009 R 399741 CDS YP_001478754.1 157370765 5603887 complement(2773851..2774843) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_00203 ABC-type sugar transport system, permease components; binding-protein-dependent transport systems inner membrane component 2774843 5603887 Spro_2525 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478754.1 2773851 R 399741 CDS YP_001478755.1 157370766 5603888 complement(2774883..2776148) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: csa:Csal_0258 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2776148 5603888 Spro_2526 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478755.1 2774883 R 399741 CDS YP_001478756.1 157370767 5603921 2776272..2777204 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB0712 hypothetical transcriptional regulator; LysR family transcriptional regulator 2777204 5603921 Spro_2527 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478756.1 2776272 D 399741 CDS YP_001478757.1 157370768 5603922 complement(2777601..2780054) 1 NC_009832.1 PFAM: MscS Mechanosensitive ion channel; KEGG: yen:YE0322 putative inner-membrane transport protein; mechanosensitive ion channel MscS 2780054 5603922 Spro_2528 Serratia proteamaculans 568 mechanosensitive ion channel MscS YP_001478757.1 2777601 R 399741 CDS YP_001478758.1 157370769 5603923 2780674..2782389 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2048 ABC transporter related; ABC transporter-like protein 2782389 5603923 Spro_2529 Serratia proteamaculans 568 ABC transporter-like protein YP_001478758.1 2780674 D 399741 CDS YP_001478759.1 157370770 5603927 complement(2782441..2783823) 1 NC_009832.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: nha:Nham_1450 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2783823 5603927 Spro_2530 Serratia proteamaculans 568 cation diffusion facilitator family transporter YP_001478759.1 2782441 R 399741 CDS YP_001478760.1 157370771 5603928 complement(2784376..2785395) 1 NC_009832.1 PFAM: CBS domain containing protein; MgtE integral membrane region; KEGG: kpn:KPN_03856 putative Mg/Co/Ni transporter MgtE; MgtE integral membrane protein 2785395 5603928 Spro_2531 Serratia proteamaculans 568 MgtE integral membrane protein YP_001478760.1 2784376 R 399741 CDS YP_001478761.1 157370772 5603929 complement(2785921..2786232) 1 NC_009832.1 PFAM: transposase IS605 OrfB; KEGG: sfv:SFV_1675 putative virulence protein; DNA (cytosine-5-)-methyltransferase 2786232 5603929 Spro_2532 Serratia proteamaculans 568 DNA (cytosine-5-)-methyltransferase YP_001478761.1 2785921 R 399741 CDS YP_001478762.1 157370773 5603977 complement(2786461..2786691) 1 NC_009832.1 KEGG: eca:ECA1942 putative periplasmic oligopeptide-binding protein; hypothetical protein 2786691 5603977 Spro_2533 Serratia proteamaculans 568 hypothetical protein YP_001478762.1 2786461 R 399741 CDS YP_001478763.1 157370774 5603978 2786990..2788006 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: yen:YE1241 iron(III)-binding periplasmic protein; extracellular solute-binding protein 2788006 5603978 Spro_2534 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478763.1 2786990 D 399741 CDS YP_001478764.1 157370775 5604067 2788040..2789623 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1240 iron(III)-transport system permease; binding-protein-dependent transport systems inner membrane component 2789623 5604067 Spro_2535 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478764.1 2788040 D 399741 CDS YP_001478765.1 157370776 5604068 2789620..2790657 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_1348 iron(III) ABC transporter, ATP-binding protein; ABC transporter-like protein 2790657 5604068 Spro_2536 Serratia proteamaculans 568 ABC transporter-like protein YP_001478765.1 2789620 D 399741 CDS YP_001478766.1 157370777 5604069 2790882..2792987 1 NC_009832.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: vei:Veis_1261 translation elongation factor G; translation elongation factor G 2792987 5604069 Spro_2537 Serratia proteamaculans 568 translation elongation factor G YP_001478766.1 2790882 D 399741 CDS YP_001478767.1 157370778 5604142 complement(2793019..2793984) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eca:ECA1517 hypothetical protein; hypothetical protein 2793984 5604142 Spro_2538 Serratia proteamaculans 568 hypothetical protein YP_001478767.1 2793019 R 399741 CDS YP_001478768.1 157370779 5604143 complement(2794165..2795271) 1 NC_009832.1 PFAM: periplasmic binding protein; KEGG: prw:PsycPRwf_0745 periplasmic binding protein; periplasmic binding protein 2795271 5604143 Spro_2539 Serratia proteamaculans 568 periplasmic binding protein YP_001478768.1 2794165 R 399741 CDS YP_001478769.1 157370780 5604144 complement(2795395..2796222) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: eca:ECA1518 AraC-family transcriptional regulator; AraC family transcriptional regulator 2796222 5604144 Spro_2540 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001478769.1 2795395 R 399741 CDS YP_001478770.1 157370781 5604151 2796436..2797869 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: atc:AGR_L_2660 hypothetical protein; aldehyde dehydrogenase 2797869 5604151 Spro_2541 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001478770.1 2796436 D 399741 CDS YP_001478771.1 157370782 5604152 complement(2798017..2798931) 1 NC_009832.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B3090 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein 2798931 5604152 Spro_2542 Serratia proteamaculans 568 alpha/beta hydrolase domain-containing protein YP_001478771.1 2798017 R 399741 CDS YP_001478772.1 157370783 5604153 complement(2798921..2799817) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B3091 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein 2799817 5604153 Spro_2543 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001478772.1 2798921 R 399741 CDS YP_001478773.1 157370784 5604166 complement(2799847..2800902) 1 NC_009832.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: pfl:PFL_3507 AP endonuclease family 2 protein; xylose isomerase domain-containing protein 2800902 5604166 Spro_2544 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001478773.1 2799847 R 399741 CDS YP_001478774.1 157370785 5604167 2801044..2801628 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_B3093 transcriptional regulator, TetR family; TetR family transcriptional regulator 2801628 5604167 Spro_2545 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478774.1 2801044 D 399741 CDS YP_001478775.1 157370786 5604168 complement(2801629..2801958) 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bur:Bcep18194_B0543 hypothetical protein; cupin 2 domain-containing protein 2801958 5604168 Spro_2546 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001478775.1 2801629 R 399741 CDS YP_001478776.1 157370787 5604251 complement(2802033..2803910) 1 NC_009832.1 PFAM: K potassium transporter; KEGG: bra:BRADO1466 potassium transport system, low affinity (KUP family); K potassium transporter 2803910 5604251 Spro_2547 Serratia proteamaculans 568 K potassium transporter YP_001478776.1 2802033 R 399741 CDS YP_001478777.1 157370788 5604252 complement(2803982..2804968) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3505 transcriptional regulator, LysR family; LysR family transcriptional regulator 2804968 5604252 Spro_2548 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478777.1 2803982 R 399741 CDS YP_001478778.1 157370789 5604253 2805063..2806013 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_A0822 ABC branched chain amino acid family transporter, inner membrane subunit; inner-membrane translocator 2806013 5604253 Spro_2549 Serratia proteamaculans 568 inner-membrane translocator YP_001478778.1 2805063 D 399741 CDS YP_001478779.1 157370790 5604330 2806023..2807135 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: rso:RSc2439 probable amino-acid transmembrane ABC transporter protein; inner-membrane translocator 2807135 5604330 Spro_2550 Serratia proteamaculans 568 inner-membrane translocator YP_001478779.1 2806023 D 399741 CDS YP_001478780.1 157370791 5604331 2807132..2807902 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_2864 ABC transporter-related protein; ABC transporter-like protein 2807902 5604331 Spro_2551 Serratia proteamaculans 568 ABC transporter-like protein YP_001478780.1 2807132 D 399741 CDS YP_001478781.1 157370792 5604332 2807895..2808608 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bte:BTH_I0788 branched-chain amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 2808608 5604332 Spro_2552 Serratia proteamaculans 568 ABC transporter-like protein YP_001478781.1 2807895 D 399741 CDS YP_001478782.1 157370793 5604348 2808643..2809803 1 NC_009832.1 PFAM: Extracellular ligand-binding receptor; KEGG: bam:Bamb_3506 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2809803 5604348 Spro_2553 Serratia proteamaculans 568 extracellular ligand-binding receptor YP_001478782.1 2808643 D 399741 CDS YP_001478783.1 157370794 5604349 2809818..2810324 1 NC_009832.1 KEGG: bur:Bcep18194_B1949 hypothetical protein; hypothetical protein 2810324 5604349 Spro_2554 Serratia proteamaculans 568 hypothetical protein YP_001478783.1 2809818 D 399741 CDS YP_001478784.1 157370795 5604350 2810321..2811547 1 NC_009832.1 KEGG: bxe:Bxe_A1427 amidase, hydantoinase/carbamoylase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 2811547 5604350 Spro_2555 Serratia proteamaculans 568 amidase YP_001478784.1 2810321 D 399741 CDS YP_001478785.1 157370796 5604366 2811638..2811985 1 NC_009832.1 PFAM: regulatory protein ArsR; KEGG: mms:mma_1896 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 2811985 5604366 Spro_2556 Serratia proteamaculans 568 ArsR family transcriptional regulator YP_001478785.1 2811638 D 399741 CDS YP_001478786.1 157370797 5604367 2811989..2812522 1 NC_009832.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mms:mma_1897 hypothetical protein; activator of Hsp90 ATPase 1 family protein 2812522 5604367 Spro_2557 Serratia proteamaculans 568 activator of Hsp90 ATPase 1 family protein YP_001478786.1 2811989 D 399741 CDS YP_001478787.1 157370798 5604368 complement(2812523..2813551) 1 NC_009832.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: kpn:KPN_01510 putative Mg2+ and Co2+ transporters; Mg2 transporter protein CorA family protein 2813551 5604368 Spro_2558 Serratia proteamaculans 568 Mg2 transporter protein CorA family protein YP_001478787.1 2812523 R 399741 CDS YP_001478788.1 157370799 5604378 2813756..2815366 1 NC_009832.1 PFAM: phosphate transporter; KEGG: pfo:Pfl_4319 phosphate transporter; phosphate transporter 2815366 5604378 Spro_2559 Serratia proteamaculans 568 phosphate transporter YP_001478788.1 2813756 D 399741 CDS YP_001478789.1 157370800 5604379 2815393..2816307 1 NC_009832.1 PFAM: protein of unknown function DUF344; KEGG: bur:Bcep18194_B1834 protein of unknown function DUF344; hypothetical protein 2816307 5604379 Spro_2560 Serratia proteamaculans 568 hypothetical protein YP_001478789.1 2815393 D 399741 CDS YP_001478790.1 157370801 5604380 2816321..2817283 1 NC_009832.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bxe:Bxe_A1545 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 2817283 5604380 Spro_2561 Serratia proteamaculans 568 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_001478790.1 2816321 D 399741 CDS YP_001478791.1 157370802 5604436 2817440..2818411 1 NC_009832.1 PFAM: luciferase family protein; KEGG: bch:Bcen2424_6567 luciferase family protein; luciferase family protein 2818411 5604436 Spro_2562 Serratia proteamaculans 568 luciferase family protein YP_001478791.1 2817440 D 399741 CDS YP_001478792.1 157370803 5604437 complement(2818422..2819726) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: aav:Aave_0017 transcriptional regulator, GntR family; transcriptional regulator 2819726 5604437 Spro_2563 Serratia proteamaculans 568 transcriptional regulator YP_001478792.1 2818422 R 399741 CDS YP_001478793.1 157370804 5604438 2819795..2820049 1 NC_009832.1 hypothetical protein 2820049 5604438 Spro_2564 Serratia proteamaculans 568 hypothetical protein YP_001478793.1 2819795 D 399741 CDS YP_001478794.1 157370805 5604469 2820046..2820762 1 NC_009832.1 PFAM: glutamine amidotransferase class-I; KEGG: cvi:CV_3746 glutamine amidotransferase; glutamine amidotransferase class-I 2820762 5604469 Spro_2565 Serratia proteamaculans 568 glutamine amidotransferase class-I YP_001478794.1 2820046 D 399741 CDS YP_001478795.1 157370806 5604470 2820763..2821602 1 NC_009832.1 TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: kpn:KPN_02766 pyridoxine kinase; pyridoxal kinase 2821602 5604470 Spro_2566 Serratia proteamaculans 568 pyridoxal kinase YP_001478795.1 2820763 D 399741 CDS YP_001478796.1 157370807 5604471 complement(2821650..2822363) 1 NC_009832.1 PFAM: type IV pilus assembly PilZ; YcgR family protein; KEGG: ent:Ent638_2358 YcgR family protein; YcgR family protein 2822363 5604471 Spro_2567 Serratia proteamaculans 568 YcgR family protein YP_001478796.1 2821650 R 399741 CDS YP_001478797.1 157370808 5604495 complement(2822438..2823220) 1 NC_009832.1 PFAM: N-formylglutamate amidohydrolase; KEGG: yen:YE2073 hypothetical protein; N-formylglutamate amidohydrolase 2823220 5604495 Spro_2568 Serratia proteamaculans 568 N-formylglutamate amidohydrolase YP_001478797.1 2822438 R 399741 CDS YP_001478798.1 157370809 5604496 complement(2823320..2825041) 1 NC_009832.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: eca:ECA4119 putative acyltransferase; phospholipid/glycerol acyltransferase 2825041 5604496 Spro_2569 Serratia proteamaculans 568 phospholipid/glycerol acyltransferase YP_001478798.1 2823320 R 399741 CDS YP_001478799.1 157370810 5604497 complement(2825201..2826871) 1 NC_009832.1 KEGG: pac:PPA1958 hypothetical protein; hypothetical protein 2826871 5604497 Spro_2570 Serratia proteamaculans 568 hypothetical protein YP_001478799.1 2825201 R 399741 CDS YP_001478800.1 157370811 5604498 2827337..2828590 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: cpr:CPR_0476 ABC transporter, substrate-binding protein; extracellular solute-binding protein 2828590 5604498 Spro_2571 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478800.1 2827337 D 399741 CDS YP_001478801.1 157370812 5604499 2828672..2829610 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1635 sugar ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 2829610 5604499 Spro_2572 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478801.1 2828672 D 399741 CDS YP_001478802.1 157370813 5604500 2829623..2830441 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcz:BCZK1636 sugar ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 2830441 5604500 Spro_2573 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478802.1 2829623 D 399741 CDS YP_001478803.1 157370814 5604513 2830464..2831576 1 NC_009832.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: amt:Amet_0894 ABC transporter related; ABC transporter-like protein 2831576 5604513 Spro_2574 Serratia proteamaculans 568 ABC transporter-like protein YP_001478803.1 2830464 D 399741 CDS YP_001478804.1 157370815 5604514 2831596..2832879 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dre:556929 zgc:154075; oxidoreductase domain-containing protein 2832879 5604514 Spro_2575 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001478804.1 2831596 D 399741 CDS YP_001478805.1 157370816 5604515 2832884..2833807 1 NC_009832.1 PFAM: ROK family protein; KEGG: pin:Ping_1332 ROK family protein; ROK family protein 2833807 5604515 Spro_2576 Serratia proteamaculans 568 ROK family protein YP_001478805.1 2832884 D 399741 CDS YP_001478806.1 157370817 5604522 2834140..2834910 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: plu:plu0832 putative aga operon transcriptional repressor; DeoR family transcriptional regulator 2834910 5604522 Spro_2577 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001478806.1 2834140 D 399741 CDS YP_001478807.1 157370818 5604523 2834935..2836101 1 NC_009832.1 TIGRFAM: Sugar isomerase AgaS; PFAM: sugar isomerase (SIS); KEGG: plu:plu0834 putative tagatose-6-phosphate ketose/aldose isomerase; sugar isomerase AgaS 2836101 5604523 Spro_2578 Serratia proteamaculans 568 sugar isomerase AgaS YP_001478807.1 2834935 D 399741 CDS YP_001478808.1 157370819 5604524 2836111..2836965 1 NC_009832.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; tagatose-bisphosphate aldolase 2836965 gatY 5604524 gatY Serratia proteamaculans 568 tagatose-bisphosphate aldolase YP_001478808.1 2836111 D 399741 CDS YP_001478809.1 157370820 5604531 2837339..2837599 1 NC_009832.1 hypothetical protein 2837599 5604531 Spro_2580 Serratia proteamaculans 568 hypothetical protein YP_001478809.1 2837339 D 399741 CDS YP_001478810.1 157370821 5604532 2837786..2838382 1 NC_009832.1 KEGG: ypi:YpsIP31758_1834 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 2838382 5604532 Spro_2581 Serratia proteamaculans 568 methylated-DNA--protein-cysteine methyltransferase YP_001478810.1 2837786 D 399741 CDS YP_001478811.1 157370822 5604533 2838608..2839372 1 NC_009832.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2839372 5604533 Spro_2582 Serratia proteamaculans 568 fumarate/nitrate reduction transcriptional regulator YP_001478811.1 2838608 D 399741 CDS YP_001478812.1 157370823 5604590 2839499..2840461 1 NC_009832.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2840461 5604590 Spro_2583 Serratia proteamaculans 568 universal stress protein UspE YP_001478812.1 2839499 D 399741 CDS YP_001478813.1 157370824 5604591 complement(2840514..2841908) 1 NC_009832.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 2841908 pntB 5604591 pntB Serratia proteamaculans 568 pyridine nucleotide transhydrogenase YP_001478813.1 2840514 R 399741 CDS YP_001478814.1 157370825 5604613 complement(2841919..2843448) 1 NC_009832.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2843448 pntA 5604613 pntA Serratia proteamaculans 568 NAD(P) transhydrogenase subunit alpha YP_001478814.1 2841919 R 399741 CDS YP_001478815.1 157370826 5604614 2843987..2844937 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: ypi:YpsIP31758_1829 hypothetical protein; hypothetical protein 2844937 5604614 Spro_2586 Serratia proteamaculans 568 hypothetical protein YP_001478815.1 2843987 D 399741 CDS YP_001478816.1 157370827 5604615 2845183..2846574 1 NC_009832.1 TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_1828 putative arginine/ornithine antiporter ArcD; arginine/ornithine antiporter 2846574 5604615 Spro_2587 Serratia proteamaculans 568 arginine/ornithine antiporter YP_001478816.1 2845183 D 399741 CDS YP_001478817.1 157370828 5604634 complement(2846604..2847020) 1 NC_009832.1 KEGG: ypi:YpsIP31758_1827 hypothetical protein; hypothetical protein 2847020 5604634 Spro_2588 Serratia proteamaculans 568 hypothetical protein YP_001478817.1 2846604 R 399741 CDS YP_001478818.1 157370829 5604635 2847148..2847870 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eca:ECA2018 short chain dehydrogenase; short chain dehydrogenase 2847870 5604635 Spro_2589 Serratia proteamaculans 568 short chain dehydrogenase YP_001478818.1 2847148 D 399741 CDS YP_001478819.1 157370830 5604636 2847908..2848669 1 NC_009832.1 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2848669 5604636 Spro_2590 Serratia proteamaculans 568 DNA-binding transcriptional regulator RstA YP_001478819.1 2847908 D 399741 CDS YP_001478820.1 157370831 5604684 2848666..2849970 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ypi:YpsIP31758_1825 sensor protein RstB; sensor protein RstB 2849970 5604684 Spro_2591 Serratia proteamaculans 568 sensor protein RstB YP_001478820.1 2848666 D 399741 CDS YP_001478821.1 157370832 5604685 2850037..2851533 1 NC_009832.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: yen:YE2085 putative carboxypeptidase; carboxypeptidase Taq 2851533 5604685 Spro_2592 Serratia proteamaculans 568 carboxypeptidase Taq YP_001478821.1 2850037 D 399741 CDS YP_001478822.1 157370833 5604686 2851844..2852125 1 NC_009832.1 KEGG: ecj:JW5826 acid shock-inducible periplasmic protein; acid shock-inducible periplasmic protein 2852125 5604686 Spro_2593 Serratia proteamaculans 568 acid shock-inducible periplasmic protein YP_001478822.1 2851844 D 399741 CDS YP_001478823.1 157370834 5604696 2852393..2853247 1 NC_009832.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: yen:YE2087 possible protease; peptidase S1 and S6 chymotrypsin/Hap 2853247 5604696 Spro_2594 Serratia proteamaculans 568 peptidase S1 and S6 chymotrypsin/Hap YP_001478823.1 2852393 D 399741 CDS YP_001478824.1 157370835 5604697 complement(2853279..2857166) 1 NC_009832.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 2857166 5604697 Spro_2595 Serratia proteamaculans 568 ATP-dependent RNA helicase HrpA YP_001478824.1 2853279 R 399741 CDS YP_001478825.1 157370836 5604698 2857436..2858041 1 NC_009832.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2858041 5604698 Spro_2596 Serratia proteamaculans 568 azoreductase YP_001478825.1 2857436 D 399741 CDS YP_001478826.1 157370837 5604717 complement(2858254..2858577) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE2095 hypothetical protein; hypothetical protein 2858577 5604717 Spro_2597 Serratia proteamaculans 568 hypothetical protein YP_001478826.1 2858254 R 399741 CDS YP_001478827.1 157370838 5604718 complement(2858586..2858783) 1 NC_009832.1 KEGG: kpn:KPN_01452 hypothetical protein; hypothetical protein 2858783 5604718 Spro_2598 Serratia proteamaculans 568 hypothetical protein YP_001478827.1 2858586 R 399741 CDS YP_001478828.1 157370839 5604719 complement(2858780..2861392) 1 NC_009832.1 KEGG: yen:YE2097 hypothetical protein; hypothetical protein 2861392 5604719 Spro_2599 Serratia proteamaculans 568 hypothetical protein YP_001478828.1 2858780 R 399741 CDS YP_001478829.1 157370840 5604767 2861949..2862941 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ypi:YpsIP31758_1808 fermentative lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2862941 5604767 Spro_2600 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001478829.1 2861949 D 399741 CDS YP_001478830.1 157370841 5604768 2862963..2863391 1 NC_009832.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ypi:YpsIP31758_1807 heat shock protein HslJ; heat-inducible protein 2863391 5604768 Spro_2601 Serratia proteamaculans 568 heat-inducible protein YP_001478830.1 2862963 D 399741 CDS YP_001478831.1 157370842 5604769 complement(2863434..2863676) 1 NC_009832.1 KEGG: yen:YE2099 putative lipoprotein; putative lipoprotein 2863676 5604769 Spro_2602 Serratia proteamaculans 568 putative lipoprotein YP_001478831.1 2863434 R 399741 CDS YP_001478832.1 157370843 5604804 complement(2864129..2864461) 1 NC_009832.1 PFAM: small multidrug resistance protein; KEGG: yen:YE2101 quaternary ammonium compound-resistance protein; small multidrug resistance protein 2864461 5604804 Spro_2603 Serratia proteamaculans 568 small multidrug resistance protein YP_001478832.1 2864129 R 399741 CDS YP_001478833.1 157370844 5604805 2864712..2868245 1 NC_009832.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: yen:YE2102 putative pyruvate-flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2868245 5604805 Spro_2604 Serratia proteamaculans 568 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001478833.1 2864712 D 399741 CDS YP_001478834.1 157370845 5604806 2868535..2868957 1 NC_009832.1 PFAM: peptidase S24 and S26 domain protein; KEGG: stm:STM1998 error-prone repair: SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases); peptidase S24/S26 domain-containing protein 2868957 5604806 Spro_2605 Serratia proteamaculans 568 peptidase S24/S26 domain-containing protein YP_001478834.1 2868535 D 399741 CDS YP_001478835.1 157370846 5604889 2868957..2870225 1 NC_009832.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: ecc:c1632 umuC protein; DNA-directed DNA polymerase 2870225 5604889 Spro_2606 Serratia proteamaculans 568 DNA-directed DNA polymerase YP_001478835.1 2868957 D 399741 CDS YP_001478836.1 157370847 5604890 2870353..2871285 1 NC_009832.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2871285 5604890 Spro_2607 Serratia proteamaculans 568 C32 tRNA thiolase YP_001478836.1 2870353 D 399741 CDS YP_001478837.1 157370848 5604891 2871426..2871824 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3709 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2871824 5604891 Spro_2608 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001478837.1 2871426 D 399741 CDS YP_001478838.1 157370849 5604988 complement(2872040..2873023) 1 NC_009832.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: yen:YE2107 CorA-like Mg2+ transporter protein; zinc transporter 2873023 zntB 5604988 zntB Serratia proteamaculans 568 zinc transporter YP_001478838.1 2872040 R 399741 CDS YP_001478839.1 157370850 5604989 2873169..2874245 1 NC_009832.1 KEGG: aav:Aave_3037 hypothetical protein; hypothetical protein 2874245 5604989 Spro_2610 Serratia proteamaculans 568 hypothetical protein YP_001478839.1 2873169 D 399741 CDS YP_001478840.1 157370851 5604990 complement(2874315..2875949) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2110 putative periplasmic murein peptide-binding protein; extracellular solute-binding protein 2875949 5604990 Spro_2611 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478840.1 2874315 R 399741 CDS YP_001478841.1 157370852 5605020 complement(2876110..2876460) 1 NC_009832.1 hypothetical protein 2876460 5605020 Spro_2612 Serratia proteamaculans 568 hypothetical protein YP_001478841.1 2876110 R 399741 CDS YP_001478842.1 157370853 5605021 complement(2876534..2877484) 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pap:PSPA7_4415 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 2877484 5605021 Spro_2613 Serratia proteamaculans 568 alcohol dehydrogenase YP_001478842.1 2876534 R 399741 CDS YP_001478843.1 157370854 5605022 2877695..2878402 1 NC_009832.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: yen:YE2111 hypothetical protein; murein peptide amidase A 2878402 5605022 Spro_2614 Serratia proteamaculans 568 murein peptide amidase A YP_001478843.1 2877695 D 399741 CDS YP_001478844.1 157370855 5605041 complement(2878399..2879379) 1 NC_009832.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: yps:YPTB2260 putative mandelate racemase / muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 2879379 5605041 Spro_2615 Serratia proteamaculans 568 mandelate racemase/muconate lactonizing protein YP_001478844.1 2878399 R 399741 CDS YP_001478845.1 157370856 5605042 2879603..2880106 1 NC_009832.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2880106 tpx 5605042 tpx Serratia proteamaculans 568 thiol peroxidase YP_001478845.1 2879603 D 399741 CDS YP_001478846.1 157370857 5605043 complement(2880171..2881742) 1 NC_009832.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 2881742 5605043 Spro_2617 Serratia proteamaculans 568 DNA-binding transcriptional regulator TyrR YP_001478846.1 2880171 R 399741 CDS YP_001478847.1 157370858 5605056 complement(2882073..2883134) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE2117 hypothetical protein; hypothetical protein 2883134 5605056 Spro_2618 Serratia proteamaculans 568 hypothetical protein YP_001478847.1 2882073 R 399741 CDS YP_001478848.1 157370859 5605057 complement(2883131..2884528) 1 NC_009832.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: yen:YE2118 hypothetical protein; hypothetical protein 2884528 5605057 Spro_2619 Serratia proteamaculans 568 hypothetical protein YP_001478848.1 2883131 R 399741 CDS YP_001478849.1 157370860 5605058 2884979..2886691 1 NC_009832.1 KEGG: gvi:gll4242 unknown protein; hypothetical protein 2886691 5605058 Spro_2620 Serratia proteamaculans 568 hypothetical protein YP_001478849.1 2884979 D 399741 CDS YP_001478850.1 157370861 5605075 complement(2886705..2886968) 1 NC_009832.1 TIGRFAM: shock protein PspD; KEGG: ent:Ent638_2166 phage shock protein D; peripheral inner membrane phage-shock protein 2886968 5605075 Spro_2621 Serratia proteamaculans 568 peripheral inner membrane phage-shock protein YP_001478850.1 2886705 R 399741 CDS YP_001478851.1 157370862 5605076 complement(2887064..2887423) 1 NC_009832.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC 2887423 5605076 Spro_2622 Serratia proteamaculans 568 DNA-binding transcriptional activator PspC YP_001478851.1 2887064 R 399741 CDS YP_001478852.1 157370863 5605077 complement(2887423..2887650) 1 NC_009832.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 2887650 pspB 5605077 pspB Serratia proteamaculans 568 phage shock protein B YP_001478852.1 2887423 R 399741 CDS YP_001478853.1 157370864 5605217 complement(2887708..2888373) 1 NC_009832.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 2888373 5605217 Spro_2624 Serratia proteamaculans 568 phage shock protein PspA YP_001478853.1 2887708 R 399741 CDS YP_001478854.1 157370865 5605218 2888558..2889565 1 NC_009832.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2889565 pspF 5605218 pspF Serratia proteamaculans 568 phage shock protein operon transcriptional activator YP_001478854.1 2888558 D 399741 CDS YP_001478855.1 157370866 5605219 complement(2889759..2890946) 1 NC_009832.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: csa:Csal_0192 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 2890946 5605219 Spro_2626 Serratia proteamaculans 568 cobalamin synthesis protein P47K YP_001478855.1 2889759 R 399741 CDS YP_001478856.1 157370867 5605258 complement(2890959..2891519) 1 NC_009832.1 KEGG: pst:PSPTO_2579 carbonic anhydrase-related protein; carbonic anhydrase-like protein 2891519 5605258 Spro_2627 Serratia proteamaculans 568 carbonic anhydrase-like protein YP_001478856.1 2890959 R 399741 CDS YP_001478857.1 157370868 5605259 complement(2891509..2892438) 1 NC_009832.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 2892438 5605259 Spro_2628 Serratia proteamaculans 568 putative GTP cyclohydrolase YP_001478857.1 2891509 R 399741 CDS YP_001478858.1 157370869 5605260 2892644..2894296 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2125 peptide transport periplasmic protein precursor; extracellular solute-binding protein 2894296 5605260 Spro_2629 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478858.1 2892644 D 399741 CDS YP_001478859.1 157370870 5605348 2894293..2895258 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2126 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2895258 5605348 Spro_2630 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478859.1 2894293 D 399741 CDS YP_001478860.1 157370871 5605349 2895245..2896135 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE2127 peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 2896135 5605349 Spro_2631 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478860.1 2895245 D 399741 CDS YP_001478861.1 157370872 5605350 2896135..2897127 1 NC_009832.1 KEGG: yen:YE2128 peptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2897127 5605350 Spro_2632 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001478861.1 2896135 D 399741 CDS YP_001478862.1 157370873 5605370 2897129..2897941 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_1780 peptide ABC transporter, ATP-binding protein SapF; ABC transporter-like protein 2897941 5605370 Spro_2633 Serratia proteamaculans 568 ABC transporter-like protein YP_001478862.1 2897129 D 399741 CDS YP_001478863.1 157370874 5605371 2898415..2899605 1 NC_009832.1 TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: ypi:YpsIP31758_1779 hypothetical protein; peroxidase-like protein 2899605 5605371 Spro_2634 Serratia proteamaculans 568 peroxidase-like protein YP_001478863.1 2898415 D 399741 CDS YP_001478864.1 157370875 5605395 complement(2899606..2900502) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2132 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 2900502 5605395 Spro_2635 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001478864.1 2899606 R 399741 CDS YP_001478865.1 157370876 5605396 complement(2900583..2901752) 1 NC_009832.1 removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; penicillin-binding protein 6B; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase 2901752 dacD 5605396 dacD Serratia proteamaculans 568 D-alanyl-D-alanine carboxypeptidase YP_001478865.1 2900583 R 399741 CDS YP_001478866.1 157370877 5605397 2902034..2904340 1 NC_009832.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE1983 putative oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 2904340 5605397 Spro_2637 Serratia proteamaculans 568 oxidoreductase alpha (molybdopterin) subunit YP_001478866.1 2902034 D 399741 CDS YP_001478867.1 157370878 5605444 2904549..2906483 1 NC_009832.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2906483 5605444 Spro_2638 Serratia proteamaculans 568 exoribonuclease II YP_001478867.1 2904549 D 399741 CDS YP_001478868.1 157370879 5605445 2906758..2908815 1 NC_009832.1 PFAM: carbon starvation protein CstA; KEGG: yen:YE1981 putative carbon starvation protein A; carbon starvation protein CstA 2908815 5605445 Spro_2639 Serratia proteamaculans 568 carbon starvation protein CstA YP_001478868.1 2906758 D 399741 CDS YP_001478869.1 157370880 5605446 complement(2908898..2909563) 1 NC_009832.1 similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 2909563 5605446 Spro_2640 Serratia proteamaculans 568 fructose-6-phosphate aldolase YP_001478869.1 2908898 R 399741 CDS YP_001478870.1 157370881 5605494 2909710..2910609 1 NC_009832.1 KEGG: yen:YE0645 putative pyruvate formate-lyase 3 activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; glycyl-radical activating family protein 2910609 5605494 Spro_2641 Serratia proteamaculans 568 glycyl-radical activating family protein YP_001478870.1 2909710 D 399741 CDS YP_001478871.1 157370882 5605495 2910614..2913046 1 NC_009832.1 KEGG: yen:YE0646 putative formate acetyltransferase; TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; pyruvate formate-lyase 2913046 5605495 Spro_2642 Serratia proteamaculans 568 pyruvate formate-lyase YP_001478871.1 2910614 D 399741 CDS YP_001478872.1 157370883 5605496 2913095..2913841 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sec:SC1699 putative regulatory protein, DeoR family; DeoR family transcriptional regulator 2913841 5605496 Spro_2643 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001478872.1 2913095 D 399741 CDS YP_001478873.1 157370884 5605531 complement(2913890..2914585) 1 NC_009832.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2914585 araD 5605531 araD Serratia proteamaculans 568 L-ribulose-5-phosphate 4-epimerase YP_001478873.1 2913890 R 399741 CDS YP_001478874.1 157370885 5605532 2914949..2915167 1 NC_009832.1 KEGG: ypi:YpsIP31758_1911 putative lipoprotein; lipoprotein 2915167 5605532 Spro_2645 Serratia proteamaculans 568 lipoprotein YP_001478874.1 2914949 D 399741 CDS YP_001478875.1 157370886 5605533 complement(2915359..2915685) 1 NC_009832.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 2915685 5605533 Spro_2646 Serratia proteamaculans 568 translation initiation factor Sui1 YP_001478875.1 2915359 R 399741 CDS YP_001478876.1 157370887 5605537 complement(2915696..2916451) 1 NC_009832.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2916451 5605537 Spro_2647 Serratia proteamaculans 568 orotidine 5'-phosphate decarboxylase YP_001478876.1 2915696 R 399741 CDS YP_001478877.1 157370888 5605538 2916753..2917013 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: kpn:KPN_00833 hypothetical protein; hypothetical protein 2917013 5605538 Spro_2648 Serratia proteamaculans 568 hypothetical protein YP_001478877.1 2916753 D 399741 CDS YP_001478878.1 157370889 5605539 2917183..2917479 1 NC_009832.1 KEGG: ypi:YpsIP31758_1914 hypothetical protein; hypothetical protein 2917479 5605539 Spro_2649 Serratia proteamaculans 568 hypothetical protein YP_001478878.1 2917183 D 399741 CDS YP_001478879.1 157370890 5605540 complement(2917534..2918703) 1 NC_009832.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: yen:YE1968 hypothetical protein; tetratricopeptide repeat-containing protein 2918703 5605540 Spro_2650 Serratia proteamaculans 568 tetratricopeptide repeat-containing protein YP_001478879.1 2917534 R 399741 CDS YP_001478880.1 157370891 5605541 complement(2918710..2919012) 1 NC_009832.1 PFAM: protein of unknown function DUF1049; KEGG: ypm:YP_2023 hypothetical protein; hypothetical protein 2919012 5605541 Spro_2651 Serratia proteamaculans 568 hypothetical protein YP_001478880.1 2918710 R 399741 CDS YP_001478881.1 157370892 5605542 complement(2919474..2920247) 1 NC_009832.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: eca:ECA1944 phosphatidylglycerophosphatase B; phosphatidylglycerophosphatase B 2920247 5605542 Spro_2652 Serratia proteamaculans 568 phosphatidylglycerophosphatase B YP_001478881.1 2919474 R 399741 CDS YP_001478882.1 157370893 5605669 2920525..2921118 1 NC_009832.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2921118 ribA 5605669 ribA Serratia proteamaculans 568 GTP cyclohydrolase II YP_001478882.1 2920525 D 399741 CDS YP_001478883.1 157370894 5605670 complement(2921165..2923837) 1 NC_009832.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2923837 5605670 Spro_2654 Serratia proteamaculans 568 aconitate hydratase YP_001478883.1 2921165 R 399741 CDS YP_001478884.1 157370895 5605671 2924101..2924742 1 NC_009832.1 KEGG: bch:Bcen2424_5419 hypothetical protein; hypothetical protein 2924742 5605671 Spro_2655 Serratia proteamaculans 568 hypothetical protein YP_001478884.1 2924101 D 399741 CDS YP_001478885.1 157370896 5605702 complement(2924870..2925844) 1 NC_009832.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2925844 cysB 5605702 cysB Serratia proteamaculans 568 transcriptional regulator CysB YP_001478885.1 2924870 R 399741 CDS YP_001478886.1 157370897 5605703 complement(2926204..2928801) 1 NC_009832.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2928801 5605703 Spro_2657 Serratia proteamaculans 568 DNA topoisomerase I YP_001478886.1 2926204 R 399741 CDS YP_001478887.1 157370898 5605704 2929228..2929479 1 NC_009832.1 KEGG: yps:YPTB2139 hypothetical protein; hypothetical protein 2929479 5605704 Spro_2658 Serratia proteamaculans 568 hypothetical protein YP_001478887.1 2929228 D 399741 CDS YP_001478888.1 157370899 5605718 complement(2929525..2930571) 1 NC_009832.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 2930571 5605718 Spro_2659 Serratia proteamaculans 568 putative periplasmic protease YP_001478888.1 2929525 R 399741 CDS YP_001478889.1 157370900 5605719 2930863..2931693 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypm:YP_2012 short chain dehydrogenase; short chain dehydrogenase 2931693 5605719 Spro_2660 Serratia proteamaculans 568 short chain dehydrogenase YP_001478889.1 2930863 D 399741 CDS YP_001478890.1 157370901 5605720 2931707..2932297 1 NC_009832.1 KEGG: ypi:YpsIP31758_1927 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2932297 5605720 Spro_2661 Serratia proteamaculans 568 cob(I)alamin adenosyltransferase YP_001478890.1 2931707 D 399741 CDS YP_001478891.1 157370902 5605733 complement(2932342..2933241) 1 NC_009832.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2933241 5605733 Spro_2662 Serratia proteamaculans 568 23S rRNA pseudouridylate synthase B YP_001478891.1 2932342 R 399741 CDS YP_001478892.1 157370903 5605734 complement(2933392..2934189) 1 NC_009832.1 KEGG: nfa:nfa52190 putative dioxygenase; putative dioxygenase 2934189 5605734 Spro_2663 Serratia proteamaculans 568 putative dioxygenase YP_001478892.1 2933392 R 399741 CDS YP_001478893.1 157370904 5605735 complement(2934339..2934698) 1 NC_009832.1 KEGG: cps:CPS_1624 hypothetical protein; hypothetical protein 2934698 5605735 Spro_2664 Serratia proteamaculans 568 hypothetical protein YP_001478893.1 2934339 R 399741 CDS YP_001478894.1 157370905 5605845 complement(2934814..2935434) 1 NC_009832.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ypi:YpsIP31758_1929 SUA5/YciO/YrdC/YwlC family protein; hypothetical protein 2935434 5605845 Spro_2665 Serratia proteamaculans 568 hypothetical protein YP_001478894.1 2934814 R 399741 CDS YP_001478895.1 157370906 5605846 complement(2935483..2936370) 1 NC_009832.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: ypi:YpsIP31758_1930 PHP domain protein; phosphotransferase domain-containing protein 2936370 5605846 Spro_2666 Serratia proteamaculans 568 phosphotransferase domain-containing protein YP_001478895.1 2935483 R 399741 CDS YP_001478896.1 157370907 5605847 2936743..2938305 1 NC_009832.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2938305 5605847 Spro_2667 Serratia proteamaculans 568 anthranilate synthase component I YP_001478896.1 2936743 D 399741 CDS YP_001478897.1 157370908 5605970 2938305..2938886 1 NC_009832.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2938886 5605970 Spro_2668 Serratia proteamaculans 568 anthranilate synthase component II YP_001478897.1 2938305 D 399741 CDS YP_001478898.1 157370909 5605971 2938902..2939900 1 NC_009832.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2939900 trpD 5605971 trpD Serratia proteamaculans 568 anthranilate phosphoribosyltransferase YP_001478898.1 2938902 D 399741 CDS YP_001478899.1 157370910 5605972 2939904..2941265 1 NC_009832.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2941265 5605972 Spro_2670 Serratia proteamaculans 568 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_001478899.1 2939904 D 399741 CDS YP_001478900.1 157370911 5606001 2941297..2942487 1 NC_009832.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2942487 5606001 Spro_2671 Serratia proteamaculans 568 tryptophan synthase subunit beta YP_001478900.1 2941297 D 399741 CDS YP_001478901.1 157370912 5606002 2942487..2943293 1 NC_009832.1 KEGG: ypi:YpsIP31758_1937 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2943293 5606002 Spro_2672 Serratia proteamaculans 568 tryptophan synthase subunit alpha YP_001478901.1 2942487 D 399741 CDS YP_001478902.1 157370913 5606003 2943512..2943826 1 NC_009832.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ypi:YpsIP31758_1939 putative phospholipid-binding domain protein; transport-associated 2943826 5606003 Spro_2673 Serratia proteamaculans 568 transport-associated YP_001478902.1 2943512 D 399741 CDS YP_001478903.1 157370914 5606118 complement(2943874..2944545) 1 NC_009832.1 receptor for colicin S4; outer membrane protein W 2944545 5606118 Spro_2674 Serratia proteamaculans 568 outer membrane protein W YP_001478903.1 2943874 R 399741 CDS YP_001478904.1 157370915 5606119 2944874..2945626 1 NC_009832.1 PFAM: protein of unknown function UPF0259; KEGG: yen:YE2218 hypothetical protein; hypothetical protein 2945626 5606119 Spro_2675 Serratia proteamaculans 568 hypothetical protein YP_001478904.1 2944874 D 399741 CDS YP_001478905.1 157370916 5606120 complement(2945673..2947376) 1 NC_009832.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: ypi:YpsIP31758_1943 sulfate permease family protein; sulfate transporter 2947376 5606120 Spro_2676 Serratia proteamaculans 568 sulfate transporter YP_001478905.1 2945673 R 399741 CDS YP_001478906.1 157370917 5606165 2947611..2948150 1 NC_009832.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2948150 5606165 Spro_2677 Serratia proteamaculans 568 intracellular septation protein A YP_001478906.1 2947611 D 399741 CDS YP_001478907.1 157370918 5606166 2948226..2948654 1 NC_009832.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2948654 5606166 Spro_2678 Serratia proteamaculans 568 acyl-CoA thioester hydrolase YP_001478907.1 2948226 D 399741 CDS YP_001478908.1 157370919 5606167 2948906..2949931 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1014 probable transcriptional regulatory DNA-binding repressor transcription regulator protein; LacI family transcription regulator 2949931 5606167 Spro_2679 Serratia proteamaculans 568 LacI family transcription regulator YP_001478908.1 2948906 D 399741 CDS YP_001478909.1 157370920 5606227 complement(2949950..2950918) 1 NC_009832.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: slo:Shew_3859 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 2950918 5606227 Spro_2680 Serratia proteamaculans 568 inosine/uridine-preferring nucleoside hydrolase YP_001478909.1 2949950 R 399741 CDS YP_001478910.1 157370921 5606228 complement(2950915..2952132) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: spc:Sputcn32_1658 major facilitator superfamily MFS_1; hypothetical protein 2952132 5606228 Spro_2681 Serratia proteamaculans 568 hypothetical protein YP_001478910.1 2950915 R 399741 CDS YP_001478911.1 157370922 5606229 complement(2952461..2953207) 1 NC_009832.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transport protein TonB 2953207 5606229 Spro_2682 Serratia proteamaculans 568 transport protein TonB YP_001478911.1 2952461 R 399741 CDS YP_001478912.1 157370923 5606249 complement(2953445..2954125) 1 NC_009832.1 PFAM: protein of unknown function DUF208; KEGG: sbo:SBO_1709 hypothetical protein; hypothetical protein 2954125 5606249 Spro_2683 Serratia proteamaculans 568 hypothetical protein YP_001478912.1 2953445 R 399741 CDS YP_001478913.1 157370924 5606250 2954280..2954576 1 NC_009832.1 PFAM: YCII-related; KEGG: ent:Ent638_2288 YCII-related; YCII-like protein 2954576 5606250 Spro_2684 Serratia proteamaculans 568 YCII-like protein YP_001478913.1 2954280 D 399741 CDS YP_001478914.1 157370925 5606461 2954744..2956633 1 NC_009832.1 hypothetical protein 2956633 5606461 Spro_2685 Serratia proteamaculans 568 hypothetical protein YP_001478914.1 2954744 D 399741 CDS YP_001478915.1 157370926 5606462 complement(2956795..2957340) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: pau:PA14_47610 putative transcriptional regulator; TetR family transcriptional regulator 2957340 5606462 Spro_2686 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001478915.1 2956795 R 399741 CDS YP_001478916.1 157370927 5606463 2957421..2958935 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_47640 putative major facilitator superfamily (MFS) transporter; major facilitator transporter 2958935 5606463 Spro_2687 Serratia proteamaculans 568 major facilitator transporter YP_001478916.1 2957421 D 399741 CDS YP_001478917.1 157370928 5606470 2959132..2959623 1 NC_009832.1 PFAM: Ferritin Dps family protein; KEGG: vco:VC0395_A2381 DPS family protein; Ferritin Dps family protein 2959623 5606470 Spro_2688 Serratia proteamaculans 568 Ferritin Dps family protein YP_001478917.1 2959132 D 399741 CDS YP_001478918.1 157370929 5606471 2960099..2961559 1 NC_009832.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2961559 cls 5606471 cls Serratia proteamaculans 568 cardiolipin synthetase YP_001478918.1 2960099 D 399741 CDS YP_001478919.1 157370930 5606472 2961815..2962138 1 NC_009832.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2962138 5606472 Spro_2690 Serratia proteamaculans 568 dsDNA-mimic protein YP_001478919.1 2961815 D 399741 CDS YP_001478920.1 157370931 5606487 complement(2962203..2962967) 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: bbt:BBta_2220 glycerol-3-phosphate regulon repressor, transcriptional regulator protein, DeoR family; DeoR family transcriptional regulator 2962967 5606487 Spro_2691 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001478920.1 2962203 R 399741 CDS YP_001478921.1 157370932 5606488 2963269..2964711 1 NC_009832.1 PFAM: carbohydrate kinase FGGY; KEGG: pae:PA1487 probable carbohydrate kinase; carbohydrate kinase FGGY 2964711 5606488 Spro_2692 Serratia proteamaculans 568 carbohydrate kinase FGGY YP_001478921.1 2963269 D 399741 CDS YP_001478922.1 157370933 5606489 2964736..2965983 1 NC_009832.1 PFAM: Ethanolamine utilisation protein EutH; KEGG: pae:PA1491 probable transporter; ethanolamine utilisation protein EutH 2965983 5606489 Spro_2693 Serratia proteamaculans 568 ethanolamine utilisation protein EutH YP_001478922.1 2964736 D 399741 CDS YP_001478923.1 157370934 5606496 2966052..2966408 1 NC_009832.1 KEGG: pae:PA1492 hypothetical protein; hypothetical protein 2966408 5606496 Spro_2694 Serratia proteamaculans 568 hypothetical protein YP_001478923.1 2966052 D 399741 CDS YP_001478924.1 157370935 5606497 complement(2966480..2967697) 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vei:Veis_1679 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2967697 5606497 Spro_2695 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001478924.1 2966480 R 399741 CDS YP_001478925.1 157370936 5606498 complement(2967694..2969091) 1 NC_009832.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: pfl:PFL_0501 oxidoreductase, FAD-binding; FAD dependent oxidoreductase 2969091 5606498 Spro_2696 Serratia proteamaculans 568 FAD dependent oxidoreductase YP_001478925.1 2967694 R 399741 CDS YP_001478926.1 157370937 5606511 complement(2969376..2970377) 1 NC_009832.1 KEGG: yen:YE2229 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2970377 5606511 Spro_2697 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001478926.1 2969376 R 399741 CDS YP_001478927.1 157370938 5606512 complement(2970374..2971390) 1 NC_009832.1 KEGG: yen:YE2230 oligopeptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide transporter ATP-binding protein 2971390 oppD 5606512 oppD Serratia proteamaculans 568 oligopeptide transporter ATP-binding protein YP_001478927.1 2970374 R 399741 CDS YP_001478928.1 157370939 5606513 complement(2971402..2972310) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1822 OppC; binding-protein-dependent transport systems inner membrane component 2972310 5606513 Spro_2699 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478928.1 2971402 R 399741 CDS YP_001478929.1 157370940 5606514 complement(2972325..2973245) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2323 oligopeptide transport system permease protein; oligopeptide transporter permease 2973245 oppB 5606514 oppB Serratia proteamaculans 568 oligopeptide transporter permease YP_001478929.1 2972325 R 399741 CDS YP_001478930.1 157370941 5606515 complement(2973329..2974966) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2233 periplasmic oligopeptide-binding protein precursor; extracellular solute-binding protein 2974966 5606515 Spro_2701 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478930.1 2973329 R 399741 CDS YP_001478931.1 157370942 5606516 complement(2975119..2976756) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE2234 periplasmic oligopeptide-binding protein precursor; extracellular solute-binding protein 2976756 5606516 Spro_2702 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478931.1 2975119 R 399741 CDS YP_001478932.1 157370943 5606560 complement(2977447..2978091) 1 NC_009832.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: yen:YE2237 hypothetical protein; hypothetical protein 2978091 5606560 Spro_2703 Serratia proteamaculans 568 hypothetical protein YP_001478932.1 2977447 R 399741 CDS YP_001478933.1 157370944 5606561 2978616..2981288 1 NC_009832.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: yen:YE2238 aldehyde-alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2981288 5606561 Spro_2704 Serratia proteamaculans 568 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001478933.1 2978616 D 399741 CDS YP_001478934.1 157370945 5606562 complement(2981414..2981998) 1 NC_009832.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2981998 5606562 Spro_2705 Serratia proteamaculans 568 thymidine kinase YP_001478934.1 2981414 R 399741 CDS YP_001478935.1 157370946 5606619 2982697..2983104 1 NC_009832.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: ypi:YpsIP31758_1966 DNA-binding protein H-NS; global DNA-binding transcriptional dual regulator H-NS 2983104 5606619 Spro_2706 Serratia proteamaculans 568 global DNA-binding transcriptional dual regulator H-NS YP_001478935.1 2982697 D 399741 CDS YP_001478936.1 157370947 5606620 complement(2983321..2984331) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: kpn:KPN_02492 uridine diphosphate galacturonate 4-epimerase; NAD-dependent epimerase/dehydratase 2984331 5606620 Spro_2707 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001478936.1 2983321 R 399741 CDS YP_001478937.1 157370948 5606621 complement(2984341..2985684) 1 NC_009832.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sgl:SG1368 putative UDP-glucose dehydrogenase; UDP-glucose 6-dehydrogenase 2985684 5606621 Spro_2708 Serratia proteamaculans 568 UDP-glucose 6-dehydrogenase YP_001478937.1 2984341 R 399741 CDS YP_001478938.1 157370949 5606625 complement(2985728..2986645) 1 NC_009832.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2986645 5606625 Spro_2709 Serratia proteamaculans 568 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_001478938.1 2985728 R 399741 CDS YP_001478939.1 157370950 5606626 complement(2986845..2987858) 1 NC_009832.1 PFAM: response regulator receiver; KEGG: yen:YE2243 probable response regulator; response regulator of RpoS 2987858 5606626 Spro_2710 Serratia proteamaculans 568 response regulator of RpoS YP_001478939.1 2986845 R 399741 CDS YP_001478940.1 157370951 5606627 complement(2987964..2988869) 1 NC_009832.1 PFAM: Patatin; KEGG: yen:YE2244 hypothetical protein; hypothetical protein 2988869 5606627 Spro_2711 Serratia proteamaculans 568 hypothetical protein YP_001478940.1 2987964 R 399741 CDS YP_001478941.1 157370952 5606668 2989012..2989476 1 NC_009832.1 PFAM: SEC-C motif domain protein; KEGG: yen:YE2246 hypothetical protein; hypothetical protein 2989476 5606668 Spro_2712 Serratia proteamaculans 568 hypothetical protein YP_001478941.1 2989012 D 399741 CDS YP_001478942.1 157370953 5606669 2989603..2990451 1 NC_009832.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2990451 purU 5606669 purU Serratia proteamaculans 568 formyltetrahydrofolate deformylase YP_001478942.1 2989603 D 399741 CDS YP_001478943.1 157370954 5604419 2991210..2991782 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: psa:PST_1098 hypothetical protein; hypothetical protein 2991782 5604419 Spro_2714 Serratia proteamaculans 568 hypothetical protein YP_001478943.1 2991210 D 399741 CDS YP_001478944.1 157370955 5606700 2991886..2992692 1 NC_009832.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2992692 5606700 Spro_2715 Serratia proteamaculans 568 exonuclease III YP_001478944.1 2991886 D 399741 CDS YP_001478945.1 157370956 5606701 2992738..2993139 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: yen:YE2255 putative pyrophosphohydrolase; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 2993139 5606701 Spro_2716 Serratia proteamaculans 568 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_001478945.1 2992738 D 399741 CDS YP_001478946.1 157370957 5606702 complement(2993149..2993442) 1 NC_009832.1 PFAM: protein of unknown function DUF1496; KEGG: yen:YE2256 hypothetical protein; hypothetical protein 2993442 5606702 Spro_2717 Serratia proteamaculans 568 hypothetical protein YP_001478946.1 2993149 R 399741 CDS YP_001478947.1 157370958 5606740 complement(2993439..2995364) 1 NC_009832.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2995364 5606740 Spro_2718 Serratia proteamaculans 568 DNA topoisomerase III YP_001478947.1 2993439 R 399741 CDS YP_001478948.1 157370959 5606741 complement(2995364..2996482) 1 NC_009832.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2996482 5606741 Spro_2719 Serratia proteamaculans 568 tRNA 2-selenouridine synthase YP_001478948.1 2995364 R 399741 CDS YP_001478949.1 157370960 5606742 complement(2996482..2997525) 1 NC_009832.1 KEGG: yen:YE2258 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase 2997525 5606742 Spro_2720 Serratia proteamaculans 568 selenide, water dikinase YP_001478949.1 2996482 R 399741 CDS YP_001478950.1 157370961 5606767 complement(2997683..2998234) 1 NC_009832.1 PFAM: nitroreductase; KEGG: ypi:YpsIP31758_1981 nitroreductase family protein; hypothetical protein 2998234 5606767 Spro_2721 Serratia proteamaculans 568 hypothetical protein YP_001478950.1 2997683 R 399741 CDS YP_001478951.1 157370962 5606768 2998395..3000251 1 NC_009832.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 3000251 5606768 Spro_2722 Serratia proteamaculans 568 protease 4 YP_001478951.1 2998395 D 399741 CDS YP_001478952.1 157370963 5606769 3000345..3001361 1 NC_009832.1 converts asparagine to aspartate and ammonia; cytoplasmic asparaginase I 3001361 ansA 5606769 ansA Serratia proteamaculans 568 cytoplasmic asparaginase I YP_001478952.1 3000345 D 399741 CDS YP_001478953.1 157370964 5606792 3001383..3002015 1 NC_009832.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 3002015 5606792 Spro_2724 Serratia proteamaculans 568 nicotinamidase/pyrazinamidase YP_001478953.1 3001383 D 399741 CDS YP_001478954.1 157370965 5606793 3002244..3003524 1 NC_009832.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: kpn:KPN_01201 putative chitinase II; glycoside hydrolase family protein 3003524 5606793 Spro_2725 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001478954.1 3002244 D 399741 CDS YP_001478955.1 157370966 5606794 complement(3003562..3003834) 1 NC_009832.1 PFAM: protein of unknown function DUF1315; KEGG: yen:YE2263 hypothetical protein; hypothetical protein 3003834 5606794 Spro_2726 Serratia proteamaculans 568 hypothetical protein YP_001478955.1 3003562 R 399741 CDS YP_001478956.1 157370967 5606795 complement(3003899..3004312) 1 NC_009832.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 3004312 5606795 Spro_2727 Serratia proteamaculans 568 methionine sulfoxide reductase B YP_001478956.1 3003899 R 399741 CDS YP_001478957.1 157370968 5606796 3004661..3005656 1 NC_009832.1 KEGG: ypi:YpsIP31758_1987 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3005656 5606796 Spro_2728 Serratia proteamaculans 568 glyceraldehyde-3-phosphate dehydrogenase YP_001478957.1 3004661 D 399741 CDS YP_001478958.1 157370969 5606797 3005737..3006612 1 NC_009832.1 PFAM: Aldose 1-epimerase; KEGG: yps:YPTB2082 hypothetical protein; aldose 1-epimerase 3006612 5606797 Spro_2729 Serratia proteamaculans 568 aldose 1-epimerase YP_001478958.1 3005737 D 399741 CDS YP_001478959.1 157370970 5606813 complement(3006717..3007481) 1 NC_009832.1 PFAM: MltA-interacting MipA family protein; KEGG: ypi:YpsIP31758_1990 MltA-interacting protein; MltA-interacting MipA family protein 3007481 5606813 Spro_2730 Serratia proteamaculans 568 MltA-interacting MipA family protein YP_001478959.1 3006717 R 399741 CDS YP_001478960.1 157370971 5606814 3007911..3009845 1 NC_009832.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: yen:YE2272 hypothetical protein; putative serine protein kinase, PrkA 3009845 5606814 Spro_2731 Serratia proteamaculans 568 putative serine protein kinase, PrkA YP_001478960.1 3007911 D 399741 CDS YP_001478961.1 157370972 5606815 3009910..3011178 1 NC_009832.1 PFAM: protein of unknown function DUF444; KEGG: yen:YE2273 hypothetical protein; hypothetical protein 3011178 5606815 Spro_2732 Serratia proteamaculans 568 hypothetical protein YP_001478961.1 3009910 D 399741 CDS YP_001478962.1 157370973 5606844 complement(3011988..3012677) 1 NC_009832.1 KEGG: bur:Bcep18194_A4761 hypothetical protein; hypothetical protein 3012677 5606844 Spro_2733 Serratia proteamaculans 568 hypothetical protein YP_001478962.1 3011988 R 399741 CDS YP_001478963.1 157370974 5606845 complement(3013206..3013364) 1 NC_009832.1 PFAM: protein of unknown function UPF0057; KEGG: eca:ECA2844 hypothetical protein; hypothetical protein 3013364 5606845 Spro_2734 Serratia proteamaculans 568 hypothetical protein YP_001478963.1 3013206 R 399741 CDS YP_001478964.1 157370975 5606878 3013587..3013763 1 NC_009832.1 KEGG: eca:ECA1771 hypothetical protein; hypothetical protein 3013763 5606878 Spro_2735 Serratia proteamaculans 568 hypothetical protein YP_001478964.1 3013587 D 399741 CDS YP_001478965.1 157370976 5606879 complement(3013816..3015933) 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yen:YE0323 ferrioxamine receptor precursor; TonB-dependent siderophore receptor 3015933 5606879 Spro_2736 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001478965.1 3013816 R 399741 CDS YP_001478966.1 157370977 5606880 complement(3016247..3016540) 1 NC_009832.1 hypothetical protein 3016540 5606880 Spro_2737 Serratia proteamaculans 568 hypothetical protein YP_001478966.1 3016247 R 399741 CDS YP_001478967.1 157370978 5606943 3016712..3017194 1 NC_009832.1 hypothetical protein 3017194 5606943 Spro_2738 Serratia proteamaculans 568 hypothetical protein YP_001478967.1 3016712 D 399741 CDS YP_001478968.1 157370979 5606944 3017461..3018321 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1552 ABC transporter ATP-binding protein; ABC transporter-like protein 3018321 5606944 Spro_2739 Serratia proteamaculans 568 ABC transporter-like protein YP_001478968.1 3017461 D 399741 CDS YP_001478969.1 157370980 5606945 3018335..3019117 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA1551 ABC transporter ATP binding protein; ABC transporter-like protein 3019117 5606945 Spro_2740 Serratia proteamaculans 568 ABC transporter-like protein YP_001478969.1 3018335 D 399741 CDS YP_001478970.1 157370981 5607014 3019136..3020644 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 putative ABC transporter substrate-binding protein; extracellular solute-binding protein 3020644 5607014 Spro_2741 Serratia proteamaculans 568 extracellular solute-binding protein YP_001478970.1 3019136 D 399741 CDS YP_001478971.1 157370982 5607015 3020644..3022362 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA1548 putative transport system membrane protein; binding-protein-dependent transport systems inner membrane component 3022362 5607015 Spro_2742 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001478971.1 3020644 D 399741 CDS YP_001478972.1 157370983 5607016 3022425..3022985 1 NC_009832.1 KEGG: sec:SC0331 endodeoxyribonuclease; endodeoxyribonuclease 3022985 5607016 Spro_2743 Serratia proteamaculans 568 endodeoxyribonuclease YP_001478972.1 3022425 D 399741 CDS YP_001478973.1 157370984 5607029 3023095..3024288 1 NC_009832.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_1996 drug resistance transporter, Bcr/CflA family; Bcr/CflA subfamily drug resistance transporter 3024288 5607029 Spro_2744 Serratia proteamaculans 568 Bcr/CflA subfamily drug resistance transporter YP_001478973.1 3023095 D 399741 CDS YP_001478974.1 157370985 5607030 complement(3024292..3025365) 1 NC_009832.1 KEGG: ent:Ent638_2362 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 3025365 5607030 Spro_2745 Serratia proteamaculans 568 alanine racemase YP_001478974.1 3024292 R 399741 CDS YP_001478975.1 157370986 5607031 complement(3025438..3026742) 1 NC_009832.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 3026742 5607031 Spro_2746 Serratia proteamaculans 568 D-amino acid dehydrogenase small subunit YP_001478975.1 3025438 R 399741 CDS YP_001478976.1 157370987 5607056 3027281..3028816 1 NC_009832.1 PFAM: SpoVR family protein; KEGG: ypi:YpsIP31758_1998 SpoVR family protein; SpoVR family protein 3028816 5607056 Spro_2747 Serratia proteamaculans 568 SpoVR family protein YP_001478976.1 3027281 D 399741 CDS YP_001478977.1 157370988 5607057 complement(3028885..3029604) 1 NC_009832.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 3029604 5607057 Spro_2748 Serratia proteamaculans 568 fatty acid metabolism regulator YP_001478977.1 3028885 R 399741 CDS YP_001478978.1 157370989 5607058 3029847..3031427 1 NC_009832.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 3031427 nhaB 5607058 nhaB Serratia proteamaculans 568 sodium/proton antiporter YP_001478978.1 3029847 D 399741 CDS YP_001478979.1 157370990 5607108 3031552..3032082 1 NC_009832.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 3032082 5607108 Spro_2750 Serratia proteamaculans 568 disulfide bond formation protein B YP_001478979.1 3031552 D 399741 CDS YP_001478980.1 157370991 5607109 complement(3032589..3033035) 1 NC_009832.1 PFAM: protein of unknown function UPF0153; KEGG: yen:YE2365 hypothetical protein; hypothetical protein 3033035 5607109 Spro_2751 Serratia proteamaculans 568 hypothetical protein YP_001478980.1 3032589 R 399741 CDS YP_001478981.1 157370992 5607110 3033444..3033692 1 NC_009832.1 KEGG: ent:Ent638_1759 protein of unknown function DUF883, ElaB; hypothetical protein 3033692 5607110 Spro_2752 Serratia proteamaculans 568 hypothetical protein YP_001478981.1 3033444 D 399741 CDS YP_001478982.1 157370993 5607147 complement(3033768..3034424) 1 NC_009832.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: yen:YE2366 putative fumarylacetoacetate hydrolase family protein; hypothetical protein 3034424 5607147 Spro_2753 Serratia proteamaculans 568 hypothetical protein YP_001478982.1 3033768 R 399741 CDS YP_001478983.1 157370994 5607148 complement(3034508..3035548) 1 NC_009832.1 TIGRFAM: lytic murein transglycosylase; KEGG: yen:YE2367 putative lipoprotein; lytic murein transglycosylase 3035548 5607148 Spro_2754 Serratia proteamaculans 568 lytic murein transglycosylase YP_001478983.1 3034508 R 399741 CDS YP_001478984.1 157370995 5607149 complement(3035612..3035884) 1 NC_009832.1 PFAM: protein of unknown function DUF709; KEGG: ecv:APECO1_292 hypothetical protein; hypothetical protein 3035884 5607149 Spro_2755 Serratia proteamaculans 568 hypothetical protein YP_001478984.1 3035612 R 399741 CDS YP_001478985.1 157370996 5607198 3036021..3036722 1 NC_009832.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 3036722 minC 5607198 minC Serratia proteamaculans 568 septum formation inhibitor YP_001478985.1 3036021 D 399741 CDS YP_001478986.1 157370997 5607199 3036748..3037560 1 NC_009832.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 3037560 5607199 Spro_2757 Serratia proteamaculans 568 cell division inhibitor MinD YP_001478986.1 3036748 D 399741 CDS YP_001478987.1 157370998 5607200 3037564..3037833 1 NC_009832.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3037833 minE 5607200 minE Serratia proteamaculans 568 cell division topological specificity factor MinE YP_001478987.1 3037564 D 399741 CDS YP_001478988.1 157370999 5607225 complement(3038070..3039242) 1 NC_009832.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: ypp:YPDSF_1046 ribonuclease D; ribonuclease D 3039242 5607225 Spro_2759 Serratia proteamaculans 568 ribonuclease D YP_001478988.1 3038070 R 399741 CDS YP_001478989.1 157371000 5607226 complement(3039281..3041002) 1 NC_009832.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 3041002 5607226 Spro_2760 Serratia proteamaculans 568 long-chain-fatty-acid--CoA ligase YP_001478989.1 3039281 R 399741 CDS YP_001478990.1 157371001 5607227 complement(3041177..3041767) 1 NC_009832.1 TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; KEGG: yen:YE2376 putative lipoprotein; Slp family outer membrane lipoprotein 3041767 5607227 Spro_2761 Serratia proteamaculans 568 Slp family outer membrane lipoprotein YP_001478990.1 3041177 R 399741 CDS YP_001478991.1 157371002 5607348 complement(3041869..3042570) 1 NC_009832.1 PFAM: peptidase M22 glycoprotease; KEGG: ypi:YpsIP31758_2016 peptidase family M22, nonpeptidase-like protein; peptidase M22 glycoprotease 3042570 5607348 Spro_2762 Serratia proteamaculans 568 peptidase M22 glycoprotease YP_001478991.1 3041869 R 399741 CDS YP_001478992.1 157371003 5607349 complement(3042651..3044555) 1 NC_009832.1 SMART: helicase c2; DEAD-like helicases; KEGG: ypi:YpsIP31758_2017 hypothetical protein; helicase c2 3044555 5607349 Spro_2763 Serratia proteamaculans 568 helicase c2 YP_001478992.1 3042651 R 399741 CDS YP_001478993.1 157371004 5607350 3044689..3045033 1 NC_009832.1 PFAM: Endoribonuclease L-PSP; KEGG: plu:plu2128 hypothetical protein; endoribonuclease L-PSP 3045033 5607350 Spro_2764 Serratia proteamaculans 568 endoribonuclease L-PSP YP_001478993.1 3044689 D 399741 CDS YP_001478994.1 157371005 5607363 complement(3045091..3045420) 1 NC_009832.1 with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; multidrug efflux system protein MdtI 3045420 5607363 Spro_2765 Serratia proteamaculans 568 multidrug efflux system protein MdtI YP_001478994.1 3045091 R 399741 CDS YP_001478995.1 157371006 5607364 complement(3045407..3045775) 1 NC_009832.1 PFAM: small multidrug resistance protein; KEGG: yen:YE2381 putative inner membrane protein; small multidrug resistance protein 3045775 5607364 Spro_2766 Serratia proteamaculans 568 small multidrug resistance protein YP_001478995.1 3045407 R 399741 CDS YP_001478996.1 157371007 5607365 complement(3046341..3046982) 1 NC_009832.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 3046982 5607365 Spro_2767 Serratia proteamaculans 568 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001478996.1 3046341 R 399741 CDS YP_001478997.1 157371008 5607410 complement(3047135..3048610) 1 NC_009832.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3048610 5607410 Spro_2768 Serratia proteamaculans 568 glucose-6-phosphate 1-dehydrogenase YP_001478997.1 3047135 R 399741 CDS YP_001478998.1 157371009 5607411 3048963..3049835 1 NC_009832.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 3049835 5607411 Spro_2769 Serratia proteamaculans 568 DNA-binding transcriptional regulator HexR YP_001478998.1 3048963 D 399741 CDS YP_001478999.1 157371010 5607412 3050023..3051465 1 NC_009832.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3051465 5607412 Spro_2770 Serratia proteamaculans 568 pyruvate kinase YP_001478999.1 3050023 D 399741 CDS YP_001479000.1 157371011 5606689 complement(3051648..3052616) 1 NC_009832.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 3052616 5606689 Spro_2771 Serratia proteamaculans 568 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_001479000.1 3051648 R 399741 CDS YP_001479001.1 157371012 5606690 complement(3052762..3054084) 1 NC_009832.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; Opacity-associated protein A domain protein; KEGG: ypi:YpsIP31758_2026 peptidase, M23 family; hypothetical protein 3054084 5606690 Spro_2772 Serratia proteamaculans 568 hypothetical protein YP_001479001.1 3052762 R 399741 CDS YP_001479002.1 157371013 5606691 complement(3054106..3055071) 1 NC_009832.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic component 3055071 znuA 5606691 znuA Serratia proteamaculans 568 high-affinity zinc transporter periplasmic component YP_001479002.1 3054106 R 399741 CDS YP_001479003.1 157371014 5605546 3055150..3055908 1 NC_009832.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase 3055908 znuC 5605546 znuC Serratia proteamaculans 568 high-affinity zinc transporter ATPase YP_001479003.1 3055150 D 399741 CDS YP_001479004.1 157371015 5605547 3055905..3056690 1 NC_009832.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 3056690 znuB 5605547 znuB Serratia proteamaculans 568 high-affinity zinc transporter membrane protein YP_001479004.1 3055905 D 399741 CDS YP_001479005.1 157371016 5605548 complement(3056765..3057769) 1 NC_009832.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3057769 ruvB 5605548 ruvB Serratia proteamaculans 568 Holliday junction DNA helicase RuvB YP_001479005.1 3056765 R 399741 CDS YP_001479006.1 157371017 5603992 complement(3057790..3058401) 1 NC_009832.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3058401 ruvA 5603992 ruvA Serratia proteamaculans 568 Holliday junction DNA helicase RuvA YP_001479006.1 3057790 R 399741 CDS YP_001479007.1 157371018 5603993 complement(3058643..3059164) 1 NC_009832.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3059164 ruvC 5603993 ruvC Serratia proteamaculans 568 Holliday junction resolvase YP_001479007.1 3058643 R 399741 CDS YP_001479008.1 157371019 5603994 complement(3059238..3059981) 1 NC_009832.1 PFAM: protein of unknown function DUF28; KEGG: eca:ECA2494 hypothetical protein; hypothetical protein 3059981 5603994 Spro_2779 Serratia proteamaculans 568 hypothetical protein YP_001479008.1 3059238 R 399741 CDS YP_001479009.1 157371020 5603847 complement(3060001..3060447) 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: ypi:YpsIP31758_2034 putative dATP pyrophosphohydrolase; NUDIX hydrolase 3060447 5603847 Spro_2780 Serratia proteamaculans 568 NUDIX hydrolase YP_001479009.1 3060001 R 399741 CDS YP_001479010.1 157371021 5603848 complement(3060447..3062228) 1 NC_009832.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3062228 aspS 5603848 aspS Serratia proteamaculans 568 aspartyl-tRNA synthetase YP_001479010.1 3060447 R 399741 CDS YP_001479011.1 157371022 5603849 complement(3062312..3062503) 1 NC_009832.1 TIGRFAM: putative regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: aeh:Mlg_0229 putative regulatory protein, FmdB family; FmdB family regulatory protein 3062503 5603849 Spro_2782 Serratia proteamaculans 568 FmdB family regulatory protein YP_001479011.1 3062312 R 399741 CDS YP_001479012.1 157371023 5603822 3062745..3063323 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: yen:YE2398 putative isochorismatase; hypothetical protein 3063323 5603822 Spro_2783 Serratia proteamaculans 568 hypothetical protein YP_001479012.1 3062745 D 399741 CDS YP_001479013.1 157371024 5603823 3063398..3064213 1 NC_009832.1 PFAM: protein of unknown function DUF72; KEGG: yen:YE2399 hypothetical protein; hypothetical protein 3064213 5603823 Spro_2784 Serratia proteamaculans 568 hypothetical protein YP_001479013.1 3063398 D 399741 CDS YP_001479014.1 157371025 5603947 3064316..3064711 1 NC_009832.1 KEGG: yen:YE2400 hypothetical protein; hypothetical protein 3064711 5603947 Spro_2785 Serratia proteamaculans 568 hypothetical protein YP_001479014.1 3064316 D 399741 CDS YP_001479015.1 157371026 5603948 3064814..3065557 1 NC_009832.1 TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ypi:YpsIP31758_2038 putative methyltransferase; putative methyltransferase 3065557 5603948 Spro_2786 Serratia proteamaculans 568 putative methyltransferase YP_001479015.1 3064814 D 399741 CDS YP_001479016.1 157371027 5603949 3065554..3066525 1 NC_009832.1 TIGRFAM: putative methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; KEGG: yen:YE2402 hypothetical protein; putative methyltransferase 3066525 5603949 Spro_2787 Serratia proteamaculans 568 putative methyltransferase YP_001479016.1 3065554 D 399741 CDS YP_001479017.1 157371028 5603189 complement(3066605..3067363) 1 NC_009832.1 PFAM: CutC family protein; KEGG: yen:YE2403 putative copper homeostasis protein; copper homeostasis protein CutC 3067363 5603189 Spro_2788 Serratia proteamaculans 568 copper homeostasis protein CutC YP_001479017.1 3066605 R 399741 CDS YP_001479018.1 157371029 5603190 3067465..3068616 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: aha:AHA_3110 putative aminotransferase B; class I and II aminotransferase 3068616 5603190 Spro_2789 Serratia proteamaculans 568 class I and II aminotransferase YP_001479018.1 3067465 D 399741 CDS YP_001479019.1 157371030 5603191 complement(3068613..3069176) 1 NC_009832.1 PFAM: protein of unknown function DUF991; KEGG: ecv:APECO1_925 hypothetical protein; hypothetical protein 3069176 5603191 Spro_2790 Serratia proteamaculans 568 hypothetical protein YP_001479019.1 3068613 R 399741 CDS YP_001479020.1 157371031 5607383 3070077..3071807 1 NC_009832.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3071807 argS 5607383 argS Serratia proteamaculans 568 arginyl-tRNA synthetase YP_001479020.1 3070077 D 399741 CDS YP_001479021.1 157371032 5607384 complement(3071881..3073416) 1 NC_009832.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: yen:YE2409 hypothetical protein; integral membrane protein MviN 3073416 5607384 Spro_2792 Serratia proteamaculans 568 integral membrane protein MviN YP_001479021.1 3071881 R 399741 CDS YP_001479022.1 157371033 5607385 complement(3073539..3074459) 1 NC_009832.1 PFAM: oxidoreductase domain protein; KEGG: yps:YPTB2025 putative oxidoreductase; oxidoreductase domain-containing protein 3074459 5607385 Spro_2793 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001479022.1 3073539 R 399741 CDS YP_001479023.1 157371034 5602461 complement(3074452..3075096) 1 NC_009832.1 PFAM: protein of unknown function DUF480; KEGG: stm:STM1168 putative cytoplasmic protein; hypothetical protein 3075096 5602461 Spro_2794 Serratia proteamaculans 568 hypothetical protein YP_001479023.1 3074452 R 399741 CDS YP_001479024.1 157371035 5602462 complement(3075106..3075690) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE2412 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase 3075690 5602462 Spro_2795 Serratia proteamaculans 568 ribosomal-protein-S5-alanine N-acetyltransferase YP_001479024.1 3075106 R 399741 CDS YP_001479025.1 157371036 5602463 3076036..3077241 1 NC_009832.1 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 3077241 5602463 Spro_2796 Serratia proteamaculans 568 multidrug resistance protein MdtH YP_001479025.1 3076036 D 399741 CDS YP_001479026.1 157371037 5602488 3077327..3077575 1 NC_009832.1 hypothetical protein 3077575 5602488 Spro_2797 Serratia proteamaculans 568 hypothetical protein YP_001479026.1 3077327 D 399741 CDS YP_001479027.1 157371038 5602489 3077705..3078352 1 NC_009832.1 cofactor involved in the reduction of disulfides; glutaredoxin 2 3078352 5602489 Spro_2798 Serratia proteamaculans 568 glutaredoxin 2 YP_001479027.1 3077705 D 399741 CDS YP_001479028.1 157371039 5602490 3078381..3080021 1 NC_009832.1 PFAM: ABC-1 domain protein; KEGG: sfr:Sfri_1807 ABC-1 domain protein; hypothetical protein 3080021 5602490 Spro_2799 Serratia proteamaculans 568 hypothetical protein YP_001479028.1 3078381 D 399741 CDS YP_001479029.1 157371040 5602497 3080160..3080723 1 NC_009832.1 PFAM: protein of unknown function DUF1439; KEGG: yen:YE2419 putative lipoprotein; hypothetical protein 3080723 5602497 Spro_2800 Serratia proteamaculans 568 hypothetical protein YP_001479029.1 3080160 D 399741 CDS YP_001479030.1 157371041 5602498 complement(3080818..3081177) 1 NC_009832.1 secreted protein; unknown function; hypothetical protein 3081177 5602498 Spro_2801 Serratia proteamaculans 568 hypothetical protein YP_001479030.1 3080818 R 399741 CDS YP_001479031.1 157371042 5602499 complement(3081248..3081556) 1 NC_009832.1 PFAM: protein of unknown function DUF437; KEGG: yen:YE1787 hypothetical protein; hypothetical protein 3081556 5602499 Spro_2802 Serratia proteamaculans 568 hypothetical protein YP_001479031.1 3081248 R 399741 CDS YP_001479032.1 157371043 5602503 complement(3081596..3081919) 1 NC_009832.1 PFAM: YebG family protein; KEGG: yen:YE1786 hypothetical protein; YebG family protein 3081919 5602503 Spro_2803 Serratia proteamaculans 568 YebG family protein YP_001479032.1 3081596 R 399741 CDS YP_001479033.1 157371044 5602504 complement(3082008..3083390) 1 NC_009832.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 3083390 5602504 Spro_2804 Serratia proteamaculans 568 ATP-dependent RNA helicase DbpA YP_001479033.1 3082008 R 399741 CDS YP_001479034.1 157371045 5602505 3083632..3084810 1 NC_009832.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 3084810 purT 5602505 purT Serratia proteamaculans 568 phosphoribosylglycinamide formyltransferase 2 YP_001479034.1 3083632 D 399741 CDS YP_001479035.1 157371046 5602522 complement(3084844..3085089) 1 NC_009832.1 PFAM: protein of unknown function UPF0181; KEGG: ypi:YpsIP31758_2352 hypothetical protein; hypothetical protein 3085089 5602522 Spro_2806 Serratia proteamaculans 568 hypothetical protein YP_001479035.1 3084844 R 399741 CDS YP_001479036.1 157371047 5602523 complement(3085153..3086151) 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: ecp:ECP_3716 putative glycosyl transferase YibD; putative glycosyl transferase 3086151 5602523 Spro_2807 Serratia proteamaculans 568 putative glycosyl transferase YP_001479036.1 3085153 R 399741 CDS YP_001479037.1 157371048 5602524 3086593..3087966 1 NC_009832.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: yps:YPTB1649 para-aminobenzoate synthase component I; para-aminobenzoate synthase subunit I 3087966 5602524 Spro_2808 Serratia proteamaculans 568 para-aminobenzoate synthase subunit I YP_001479037.1 3086593 D 399741 CDS YP_001479038.1 157371049 5602534 3087963..3088541 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: yen:YE1780 MutT-family protein; hypothetical protein 3088541 5602534 Spro_2809 Serratia proteamaculans 568 hypothetical protein YP_001479038.1 3087963 D 399741 CDS YP_001479039.1 157371050 5602535 3088965..3090350 1 NC_009832.1 KEGG: ypi:YpsIP31758_2355 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3090350 5602535 Spro_2810 Serratia proteamaculans 568 L-serine dehydratase 1 YP_001479039.1 3088965 D 399741 CDS YP_001479040.1 157371051 5602536 3090810..3092426 1 NC_009832.1 PFAM: EAL domain protein; KEGG: ent:Ent638_2384 diguanylate phosphodiesterase; EAL domain-containing protein 3092426 5602536 Spro_2811 Serratia proteamaculans 568 EAL domain-containing protein YP_001479040.1 3090810 D 399741 CDS YP_001479041.1 157371052 5602576 complement(3092444..3093988) 1 NC_009832.1 PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: ypi:YpsIP31758_2367 membrane protein TerC family/CBS domain protein; integral membrane protein TerC 3093988 5602576 Spro_2812 Serratia proteamaculans 568 integral membrane protein TerC YP_001479041.1 3092444 R 399741 CDS YP_001479042.1 157371053 5602577 3094564..3095535 1 NC_009832.1 KEGG: yps:YPTB1634 PTS system, mannose-specific IIAB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component; PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 3095535 5602577 Spro_2813 Serratia proteamaculans 568 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_001479042.1 3094564 D 399741 CDS YP_001479043.1 157371054 5602578 3095591..3096391 1 NC_009832.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: ypi:YpsIP31758_2369 PTS system, mannose/fructose/sorbose family, IIC component; PTS system mannose/fructose/sorbose family transporter subunit IIC 3096391 5602578 Spro_2814 Serratia proteamaculans 568 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_001479043.1 3095591 D 399741 CDS YP_001479044.1 157371055 5602620 3096407..3097249 1 NC_009832.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 3097249 5602620 Spro_2815 Serratia proteamaculans 568 PTS system mannose-specific transporter subunit IID YP_001479044.1 3096407 D 399741 CDS YP_001479045.1 157371056 5602621 3097443..3097901 1 NC_009832.1 PFAM: protein of unknown function DUF986; KEGG: ypi:YpsIP31758_2371 hypothetical protein; hypothetical protein 3097901 5602621 Spro_2816 Serratia proteamaculans 568 hypothetical protein YP_001479045.1 3097443 D 399741 CDS YP_001479046.1 157371057 5602622 3098318..3098887 1 NC_009832.1 PFAM: protein of unknown function DUF204; KEGG: yen:YE1772 hypothetical protein; hypothetical protein 3098887 5602622 Spro_2817 Serratia proteamaculans 568 hypothetical protein YP_001479046.1 3098318 D 399741 CDS YP_001479047.1 157371058 5602652 complement(3098944..3100335) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_4582 drug resistance transporter, EmrB/QacA subfamily; major facilitator transporter 3100335 5602652 Spro_2818 Serratia proteamaculans 568 major facilitator transporter YP_001479047.1 3098944 R 399741 CDS YP_001479048.1 157371059 5602653 3100465..3101202 1 NC_009832.1 SMART: regulatory protein ArsR; KEGG: ccr:CC_3070 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3101202 5602653 Spro_2819 Serratia proteamaculans 568 ArsR family transcriptional regulator YP_001479048.1 3100465 D 399741 CDS YP_001479049.1 157371060 5602654 complement(3101199..3102020) 1 NC_009832.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 3102020 rrmA 5602654 rrmA Serratia proteamaculans 568 23S rRNA methyltransferase A YP_001479049.1 3101199 R 399741 CDS YP_001479050.1 157371061 5602776 3102165..3102881 1 NC_009832.1 PFAM: protein of unknown function DUF152; KEGG: ypk:y2562 hypothetical protein; hypothetical protein 3102881 5602776 Spro_2821 Serratia proteamaculans 568 hypothetical protein YP_001479050.1 3102165 D 399741 CDS YP_001479051.1 157371062 5602777 complement(3102934..3103143) 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yps:YPTB1624 cold shock protein; cold shock-like protein CspC 3103143 5602777 Spro_2822 Serratia proteamaculans 568 cold shock-like protein CspC YP_001479051.1 3102934 R 399741 CDS YP_001479052.1 157371063 5602778 complement(3104179..3105177) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2754 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3105177 5602778 Spro_2823 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001479052.1 3104179 R 399741 CDS YP_001479053.1 157371064 5602791 3105397..3105687 1 NC_009832.1 hypothetical protein 3105687 5602791 Spro_2824 Serratia proteamaculans 568 hypothetical protein YP_001479053.1 3105397 D 399741 CDS YP_001479054.1 157371065 5602792 complement(3105727..3107094) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: yen:YE1761 aromatic amino acid transport protein; amino acid permease-associated protein 3107094 5602792 Spro_2825 Serratia proteamaculans 568 amino acid permease-associated protein YP_001479054.1 3105727 R 399741 CDS YP_001479055.1 157371066 5602793 complement(3107271..3107507) 1 NC_009832.1 KEGG: ypi:YpsIP31758_2382 hypothetical protein; hypothetical protein 3107507 5602793 Spro_2826 Serratia proteamaculans 568 hypothetical protein YP_001479055.1 3107271 R 399741 CDS YP_001479056.1 157371067 5602824 complement(3107575..3107889) 1 NC_009832.1 KEGG: ypi:YpsIP31758_2383 hypothetical protein; hypothetical protein 3107889 5602824 Spro_2827 Serratia proteamaculans 568 hypothetical protein YP_001479056.1 3107575 R 399741 CDS YP_001479057.1 157371068 5602825 complement(3108035..3108307) 1 NC_009832.1 KEGG: yps:YPTB1618 hypothetical protein; hypothetical protein 3108307 5602825 Spro_2828 Serratia proteamaculans 568 hypothetical protein YP_001479057.1 3108035 R 399741 CDS YP_001479058.1 157371069 5602826 complement(3108407..3108529) 1 NC_009832.1 KEGG: plu:plu2786 hypothetical protein; hypothetical protein 3108529 5602826 Spro_2829 Serratia proteamaculans 568 hypothetical protein YP_001479058.1 3108407 R 399741 CDS YP_001479059.1 157371070 5603026 3108728..3108961 1 NC_009832.1 KEGG: ypi:YpsIP31758_2385 hypothetical protein; hypothetical protein 3108961 5603026 Spro_2830 Serratia proteamaculans 568 hypothetical protein YP_001479059.1 3108728 D 399741 CDS YP_001479060.1 157371071 5603027 complement(3109001..3109240) 1 NC_009832.1 KEGG: ypi:YpsIP31758_2386 hypothetical protein; hypothetical protein 3109240 5603027 Spro_2831 Serratia proteamaculans 568 hypothetical protein YP_001479060.1 3109001 R 399741 CDS YP_001479061.1 157371072 5603028 3109442..3109654 1 NC_009832.1 KEGG: kpn:KPN_01028 hypothetical protein; hypothetical protein 3109654 5603028 Spro_2832 Serratia proteamaculans 568 hypothetical protein YP_001479061.1 3109442 D 399741 CDS YP_001479062.1 157371073 5603051 3110111..3110497 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1753 AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 3110497 5603051 Spro_2833 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479062.1 3110111 D 399741 CDS YP_001479063.1 157371074 5603052 complement(3110527..3110880) 1 NC_009832.1 PFAM: protein of unknown function DUF1304; KEGG: kpn:KPN_01507 hypothetical protein; hypothetical protein 3110880 5603052 Spro_2834 Serratia proteamaculans 568 hypothetical protein YP_001479063.1 3110527 R 399741 CDS YP_001479064.1 157371075 5603053 complement(3111308..3112249) 1 NC_009832.1 PFAM: Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein; pirin domain-containing protein 3112249 5603053 Spro_2835 Serratia proteamaculans 568 pirin domain-containing protein YP_001479064.1 3111308 R 399741 CDS YP_001479065.1 157371076 5603094 complement(3112961..3113407) 1 NC_009832.1 PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Transport-associated and nodulation region; KEGG: stm:STM2795 hypothetical protein; LysM domain/BON superfamily protein 3113407 5603094 Spro_2836 Serratia proteamaculans 568 LysM domain/BON superfamily protein YP_001479065.1 3112961 R 399741 CDS YP_001479066.1 157371077 5603095 3113634..3113825 1 NC_009832.1 PFAM: protein of unknown function DUF1482; KEGG: kpn:KPN_02353 hypothetical protein; hypothetical protein 3113825 5603095 Spro_2837 Serratia proteamaculans 568 hypothetical protein YP_001479066.1 3113634 D 399741 CDS YP_001479067.1 157371078 5603096 3113956..3114180 1 NC_009832.1 hypothetical protein 3114180 5603096 Spro_2838 Serratia proteamaculans 568 hypothetical protein YP_001479067.1 3113956 D 399741 CDS YP_001479068.1 157371079 5603097 complement(3114267..3115349) 1 NC_009832.1 PFAM: porin Gram-negative type; KEGG: yen:YE2463 outer membrane porin protein; porin 3115349 5603097 Spro_2839 Serratia proteamaculans 568 porin YP_001479068.1 3114267 R 399741 CDS YP_001479069.1 157371080 5603098 complement(3116001..3116984) 1 NC_009832.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 3116984 5603098 Spro_2840 Serratia proteamaculans 568 succinylglutamate desuccinylase YP_001479069.1 3116001 R 399741 CDS YP_001479070.1 157371081 5603099 complement(3116996..3118336) 1 NC_009832.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 3118336 5603099 Spro_2841 Serratia proteamaculans 568 succinylarginine dihydrolase YP_001479070.1 3116996 R 399741 CDS YP_001479071.1 157371082 5603120 complement(3118420..3119892) 1 NC_009832.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 3119892 astD 5603120 astD Serratia proteamaculans 568 succinylglutamic semialdehyde dehydrogenase YP_001479071.1 3118420 R 399741 CDS YP_001479072.1 157371083 5603121 complement(3119892..3120926) 1 NC_009832.1 PFAM: arginine N-succinyltransferase beta subunit; KEGG: yen:YE2468 arginine N-succinyltransferase; arginine succinyltransferase 3120926 5603121 Spro_2843 Serratia proteamaculans 568 arginine succinyltransferase YP_001479072.1 3119892 R 399741 CDS YP_001479073.1 157371084 5603122 complement(3120979..3122193) 1 NC_009832.1 catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase 3122193 5603122 Spro_2844 Serratia proteamaculans 568 bifunctional succinylornithine transaminase/acetylornithine transaminase YP_001479073.1 3120979 R 399741 CDS YP_001479074.1 157371085 5603133 3122934..3124208 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: vvy:VVA0125 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 3124208 5603133 Spro_2845 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479074.1 3122934 D 399741 CDS YP_001479075.1 157371086 5603134 3124343..3125284 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0126 ABC-type sugar transport system, permease component; binding-protein-dependent transport systems inner membrane component 3125284 5603134 Spro_2846 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479075.1 3124343 D 399741 CDS YP_001479076.1 157371087 5603135 3125274..3126107 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0127 ABC-type sugar transport system, permease component; binding-protein-dependent transport systems inner membrane component 3126107 5603135 Spro_2847 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479076.1 3125274 D 399741 CDS YP_001479077.1 157371088 5603172 3126111..3127520 1 NC_009832.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: gbe:GbCGDNIH1_2202 cytosol aminopeptidase; leucyl aminopeptidase 3127520 5603172 Spro_2848 Serratia proteamaculans 568 leucyl aminopeptidase YP_001479077.1 3126111 D 399741 CDS YP_001479078.1 157371089 5603173 3127520..3128653 1 NC_009832.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_0607 ABC transporter related; ABC transporter-like protein 3128653 5603173 Spro_2849 Serratia proteamaculans 568 ABC transporter-like protein YP_001479078.1 3127520 D 399741 CDS YP_001479079.1 157371090 5603174 3128706..3129707 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_4293 periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 3129707 5603174 Spro_2850 Serratia proteamaculans 568 LacI family transcription regulator YP_001479079.1 3128706 D 399741 CDS YP_001479080.1 157371091 5603200 complement(3129717..3130643) 1 NC_009832.1 PFAM: peptidase T2 asparaginase 2; KEGG: ftn:FTN_0588 asparaginase; asparaginase 3130643 5603200 Spro_2851 Serratia proteamaculans 568 asparaginase YP_001479080.1 3129717 R 399741 CDS YP_001479081.1 157371092 5603201 3130886..3131860 1 NC_009832.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: psp:PSPPH_3647 lipase; alpha/beta hydrolase domain-containing protein 3131860 5603201 Spro_2852 Serratia proteamaculans 568 alpha/beta hydrolase domain-containing protein YP_001479081.1 3130886 D 399741 CDS YP_001479082.1 157371093 5603202 complement(3131862..3132830) 1 NC_009832.1 KEGG: kpn:KPN_02023 ATP-binding protein of oligopeptide ABC transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3132830 5603202 Spro_2853 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001479082.1 3131862 R 399741 CDS YP_001479083.1 157371094 5603217 complement(3132820..3133806) 1 NC_009832.1 KEGG: kpn:KPN_02022 putative ABC transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3133806 5603217 Spro_2854 Serratia proteamaculans 568 oligopeptide/dipeptide ABC transporter ATPase YP_001479083.1 3132820 R 399741 CDS YP_001479084.1 157371095 5603218 complement(3133803..3134753) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02021 oligopeptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 3134753 5603218 Spro_2855 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479084.1 3133803 R 399741 CDS YP_001479085.1 157371096 5603219 complement(3134756..3135724) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02020 oligopeptide ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 3135724 5603219 Spro_2856 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479085.1 3134756 R 399741 CDS YP_001479086.1 157371097 5603226 complement(3135761..3137542) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_02019 putative oligopeptide ABC transporter, oligopeptide-binding protein; extracellular solute-binding protein 3137542 5603226 Spro_2857 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479086.1 3135761 R 399741 CDS YP_001479087.1 157371098 5603227 complement(3137603..3139021) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE2470 putative GntR-family regulatory protein; transcriptional regulator 3139021 5603227 Spro_2858 Serratia proteamaculans 568 transcriptional regulator YP_001479087.1 3137603 R 399741 CDS YP_001479088.1 157371099 5603228 3139166..3140566 1 NC_009832.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: yen:YE2471 putative cytochrome oxidase subunit; cytochrome bd ubiquinol oxidase subunit I 3140566 5603228 Spro_2859 Serratia proteamaculans 568 cytochrome bd ubiquinol oxidase subunit I YP_001479088.1 3139166 D 399741 CDS YP_001479089.1 157371100 5603235 3140569..3141576 1 NC_009832.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: yen:YE2472 putative cytochrome oxidase subunit; cytochrome d ubiquinol oxidase subunit II 3141576 5603235 Spro_2860 Serratia proteamaculans 568 cytochrome d ubiquinol oxidase subunit II YP_001479089.1 3140569 D 399741 CDS YP_001479090.1 157371101 5603236 3141576..3141740 1 NC_009832.1 KEGG: pfl:PFL_5362 hypothetical protein; hypothetical protein 3141740 5603236 Spro_2861 Serratia proteamaculans 568 hypothetical protein YP_001479090.1 3141576 D 399741 CDS YP_001479091.1 157371102 5603252 complement(3141790..3142875) 1 NC_009832.1 PFAM: fatty acid desaturase; KEGG: eca:ECA0116 putative fatty acid desaturase; fatty acid desaturase 3142875 5603252 Spro_2862 Serratia proteamaculans 568 fatty acid desaturase YP_001479091.1 3141790 R 399741 CDS YP_001479092.1 157371103 5603253 complement(3142872..3143954) 1 NC_009832.1 PFAM: fatty acid desaturase; KEGG: eca:ECA0115 putative fatty acid desaturase; fatty acid desaturase 3143954 5603253 Spro_2863 Serratia proteamaculans 568 fatty acid desaturase YP_001479092.1 3142872 R 399741 CDS YP_001479093.1 157371104 5603254 complement(3143947..3145080) 1 NC_009832.1 PFAM: fatty acid hydroxylase; KEGG: eca:ECA0114 hypothetical protein; fatty acid hydroxylase 3145080 5603254 Spro_2864 Serratia proteamaculans 568 fatty acid hydroxylase YP_001479093.1 3143947 R 399741 CDS YP_001479094.1 157371105 5603258 complement(3145077..3145697) 1 NC_009832.1 KEGG: eca:ECA0113 hypothetical protein; hypothetical protein 3145697 5603258 Spro_2865 Serratia proteamaculans 568 hypothetical protein YP_001479094.1 3145077 R 399741 CDS YP_001479095.1 157371106 5603259 complement(3145694..3146977) 1 NC_009832.1 TIGRFAM: putative adenylate-forming enzyme; KEGG: ypi:YpsIP31758_2104 hypothetical protein; putative adenylate-forming protein 3146977 5603259 Spro_2866 Serratia proteamaculans 568 putative adenylate-forming protein YP_001479095.1 3145694 R 399741 CDS YP_001479096.1 157371107 5603260 complement(3146974..3147780) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_2106 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3147780 5603260 Spro_2867 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001479096.1 3146974 R 399741 CDS YP_001479097.1 157371108 5603261 complement(3147773..3148789) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ypi:YpsIP31758_2107 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 3148789 5603261 Spro_2868 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001479097.1 3147773 R 399741 CDS YP_001479098.1 157371109 5603262 complement(3148786..3149793) 1 NC_009832.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: yps:YPTB1971 putative 3-oxoacyl-(acyl-carrier-protein) synthase III; beta-ketoacyl-acyl-carrier-protein synthase I 3149793 5603262 Spro_2869 Serratia proteamaculans 568 beta-ketoacyl-acyl-carrier-protein synthase I YP_001479098.1 3148786 R 399741 CDS YP_001479099.1 157371110 5603263 complement(3150016..3150282) 1 NC_009832.1 hypothetical protein 3150282 5603263 Spro_2870 Serratia proteamaculans 568 hypothetical protein YP_001479099.1 3150016 R 399741 CDS YP_001479100.1 157371111 5603264 3150813..3151409 1 NC_009832.1 PFAM: integrase family protein; KEGG: plu:plu0419 recombinase, type 1 fimbriae regulatory protein; integrase family protein 3151409 5603264 Spro_2871 Serratia proteamaculans 568 integrase family protein YP_001479100.1 3150813 D 399741 CDS YP_001479101.1 157371112 5603265 3151840..3152385 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 3152385 5603265 Spro_2872 Serratia proteamaculans 568 fimbrial protein YP_001479101.1 3151840 D 399741 CDS YP_001479102.1 157371113 5603266 3152467..3153147 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone; pili assembly chaperone 3153147 5603266 Spro_2873 Serratia proteamaculans 568 pili assembly chaperone YP_001479102.1 3152467 D 399741 CDS YP_001479103.1 157371114 5603272 3153196..3155718 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher; fimbrial biogenesis outer membrane usher protein 3155718 5603272 Spro_2874 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001479103.1 3153196 D 399741 CDS YP_001479104.1 157371115 5603273 3155715..3156782 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: ent:Ent638_1072 fimbrial protein; fimbrial protein 3156782 5603273 Spro_2875 Serratia proteamaculans 568 fimbrial protein YP_001479104.1 3155715 D 399741 CDS YP_001479105.1 157371116 5603274 3156824..3157339 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: ent:Ent638_1068 fimbrial protein; fimbrial protein 3157339 5603274 Spro_2876 Serratia proteamaculans 568 fimbrial protein YP_001479105.1 3156824 D 399741 CDS YP_001479106.1 157371117 5603278 3157432..3157947 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: kpn:KPN_03292 fimbrial morphology; fimbrial protein 3157947 5603278 Spro_2877 Serratia proteamaculans 568 fimbrial protein YP_001479106.1 3157432 D 399741 CDS YP_001479107.1 157371118 5603279 3157974..3158501 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: shm:Shewmr7_3393 fimbrial protein; fimbrial protein 3158501 5603279 Spro_2878 Serratia proteamaculans 568 fimbrial protein YP_001479107.1 3157974 D 399741 CDS YP_001479108.1 157371119 5603280 3158498..3159097 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: aha:AHA_1023 DNA-binding response regulator, LuxR family; LuxR family transcriptional regulator 3159097 5603280 Spro_2879 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001479108.1 3158498 D 399741 CDS YP_001479109.1 157371120 5603281 complement(3159145..3159822) 1 NC_009832.1 KEGG: kpn:KPN_02211 nitrate reductase 1, cytochrome b(NR), gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma 3159822 5603281 Spro_2880 Serratia proteamaculans 568 respiratory nitrate reductase subunit gamma YP_001479109.1 3159145 R 399741 CDS YP_001479110.1 157371121 5603282 complement(3159825..3160547) 1 NC_009832.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain; nitrate reductase molybdenum cofactor assembly chaperone 3160547 5603282 Spro_2881 Serratia proteamaculans 568 nitrate reductase molybdenum cofactor assembly chaperone YP_001479110.1 3159825 R 399741 CDS YP_001479111.1 157371122 5603283 complement(3160544..3162088) 1 NC_009832.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; nitrate reductase subunit beta 3162088 5603283 Spro_2882 Serratia proteamaculans 568 nitrate reductase subunit beta YP_001479111.1 3160544 R 399741 CDS YP_001479112.1 157371123 5603284 complement(3162085..3165807) 1 NC_009832.1 TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eca:ECA2031 respiratory nitrate reductase 1 alpha chain; nitrate reductase subunit alpha 3165807 5603284 Spro_2883 Serratia proteamaculans 568 nitrate reductase subunit alpha YP_001479112.1 3162085 R 399741 CDS YP_001479113.1 157371124 5603285 complement(3166295..3167548) 1 NC_009832.1 hypothetical protein 3167548 5603285 Spro_2884 Serratia proteamaculans 568 hypothetical protein YP_001479113.1 3166295 R 399741 CDS YP_001479114.1 157371125 5603286 complement(3167734..3168636) 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: pha:PSHAa1789 glycosyl transferase, 2; glycosyl transferase family protein 3168636 5603286 Spro_2885 Serratia proteamaculans 568 glycosyl transferase family protein YP_001479114.1 3167734 R 399741 CDS YP_001479115.1 157371126 5603287 complement(3168641..3169630) 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: bsu:BG11868 similar to capsular polysaccharide biosynthesis; glycosyl transferase family protein 3169630 5603287 Spro_2886 Serratia proteamaculans 568 glycosyl transferase family protein YP_001479115.1 3168641 R 399741 CDS YP_001479116.1 157371127 5603288 complement(3169637..3171514) 1 NC_009832.1 PFAM: Carbohydrate-binding CenC domain protein; KEGG: ehi:10.t00010 hypothetical protein Pfam: CBM_4_9; carbohydrate-binding CenC domain-containing protein 3171514 5603288 Spro_2887 Serratia proteamaculans 568 carbohydrate-binding CenC domain-containing protein YP_001479116.1 3169637 R 399741 CDS YP_001479117.1 157371128 5603289 complement(3171511..3172254) 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: ecs:ECs2845 putative glycosyl transferase; glycosyl transferase family protein 3172254 5603289 Spro_2888 Serratia proteamaculans 568 glycosyl transferase family protein YP_001479117.1 3171511 R 399741 CDS YP_001479118.1 157371129 5603290 complement(3172256..3173317) 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: gox:GOX0630 lipopolysaccharide core biosynthesis protein WbcM; group 1 glycosyl transferase 3173317 5603290 Spro_2889 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001479118.1 3172256 R 399741 CDS YP_001479119.1 157371130 5603291 complement(3173319..3174224) 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: sgl:SG0982 hypothetical protein; glycosyl transferase family protein 3174224 5603291 Spro_2890 Serratia proteamaculans 568 glycosyl transferase family protein YP_001479119.1 3173319 R 399741 CDS YP_001479120.1 157371131 5603292 complement(3174366..3175214) 1 NC_009832.1 KEGG: sgl:SG1244 hypothetical protein; hypothetical protein 3175214 5603292 Spro_2891 Serratia proteamaculans 568 hypothetical protein YP_001479120.1 3174366 R 399741 CDS YP_001479121.1 157371132 5603296 complement(3175204..3176493) 1 NC_009832.1 PFAM: polysaccharide biosynthesis protein; KEGG: ana:all4430 probable polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3176493 5603296 Spro_2892 Serratia proteamaculans 568 polysaccharide biosynthesis protein YP_001479121.1 3175204 R 399741 CDS YP_001479122.1 157371133 5603297 complement(3176498..3178681) 1 NC_009832.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: eca:ECA1419 tyrosine-protein kinase; non-specific protein-tyrosine kinase 3178681 5603297 Spro_2893 Serratia proteamaculans 568 non-specific protein-tyrosine kinase YP_001479122.1 3176498 R 399741 CDS YP_001479123.1 157371134 5603298 complement(3178710..3179843) 1 NC_009832.1 PFAM: polysaccharide export protein; KEGG: eca:ECA1417 putative polysaccharide export protein; polysaccharide export protein 3179843 5603298 Spro_2894 Serratia proteamaculans 568 polysaccharide export protein YP_001479123.1 3178710 R 399741 CDS YP_001479124.1 157371135 5603302 complement(3179889..3180938) 1 NC_009832.1 TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase family 4; KEGG: eca:ECA1416 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3180938 5603302 Spro_2895 Serratia proteamaculans 568 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_001479124.1 3179889 R 399741 CDS YP_001479125.1 157371136 5603303 complement(3181119..3182075) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tde:TDE1439 epimerase/dehydratase, putative; NAD-dependent epimerase/dehydratase 3182075 5603303 Spro_2896 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001479125.1 3181119 R 399741 CDS YP_001479126.1 157371137 5603304 complement(3182257..3183156) 1 NC_009832.1 PFAM: transcriptional regulator domain protein; KEGG: vvy:VVA0492 hypothetical protein; transcriptional regulator CadC 3183156 5603304 Spro_2897 Serratia proteamaculans 568 transcriptional regulator CadC YP_001479126.1 3182257 R 399741 CDS YP_001479127.1 157371138 5603313 complement(3183925..3185313) 1 NC_009832.1 TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: spt:SPA1108 nitrite extrusion protein (nitrite facilitator); nitrite transporter 3185313 5603313 Spro_2898 Serratia proteamaculans 568 nitrite transporter YP_001479127.1 3183925 R 399741 CDS YP_001479128.1 157371139 5603314 3185676..3187460 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA2029 nitrate/nitrite sensor kinase; nitrate/nitrite sensor protein NarX 3187460 5603314 Spro_2899 Serratia proteamaculans 568 nitrate/nitrite sensor protein NarX YP_001479128.1 3185676 D 399741 CDS YP_001479129.1 157371140 5603315 3187472..3188122 1 NC_009832.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 3188122 5603315 Spro_2900 Serratia proteamaculans 568 transcriptional regulator NarL YP_001479129.1 3187472 D 399741 CDS YP_001479130.1 157371141 5603316 complement(3188119..3189612) 1 NC_009832.1 KEGG: ent:Ent638_2319 putative invasin; hypothetical protein 3189612 5603316 Spro_2901 Serratia proteamaculans 568 hypothetical protein YP_001479130.1 3188119 R 399741 CDS YP_001479131.1 157371142 5603317 3190133..3190834 1 NC_009832.1 PFAM: peptidase A24A prepilin type IV; KEGG: yen:YE3574 type 4 prepilin-like proteins leader peptide processing enzyme; peptidase A24A prepilin type IV 3190834 5603317 Spro_2902 Serratia proteamaculans 568 peptidase A24A prepilin type IV YP_001479131.1 3190133 D 399741 CDS YP_001479132.1 157371143 5603318 3190969..3191535 1 NC_009832.1 PFAM: PEBP family protein; KEGG: reu:Reut_B3733 YbhB and YbcL; PEBP family protein 3191535 5603318 Spro_2903 Serratia proteamaculans 568 PEBP family protein YP_001479132.1 3190969 D 399741 CDS YP_001479133.1 157371144 5603319 complement(3191540..3192355) 1 NC_009832.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eca:ECA2989 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3192355 5603319 Spro_2904 Serratia proteamaculans 568 uroporphyrin-III C-methyltransferase YP_001479133.1 3191540 R 399741 CDS YP_001479134.1 157371145 5603320 complement(3192369..3195020) 1 NC_009832.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2990 nitrate reductase; molybdopterin oxidoreductase 3195020 5603320 Spro_2905 Serratia proteamaculans 568 molybdopterin oxidoreductase YP_001479134.1 3192369 R 399741 CDS YP_001479135.1 157371146 5603321 complement(3195017..3199162) 1 NC_009832.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; nitrite reductase [NAD(P)H], small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; Rieske [2Fe-2S] domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: eca:ECA2991 nitrite reductase [NAD(P)H] large subunit; nitrite reductase (NAD(P)H), large subunit 3199162 5603321 Spro_2906 Serratia proteamaculans 568 nitrite reductase (NAD(P)H), large subunit YP_001479135.1 3195017 R 399741 CDS YP_001479136.1 157371147 5603322 complement(3199173..3199961) 1 NC_009832.1 KEGG: eca:ECA2992 nitrate transport protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 3199961 5603322 Spro_2907 Serratia proteamaculans 568 nitrate ABC transporter ATPases C and D YP_001479136.1 3199173 R 399741 CDS YP_001479137.1 157371148 5603323 complement(3199971..3200867) 1 NC_009832.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2993 nitrate transporter permease component; nitrate ABC transporter inner membrane subunit 3200867 5603323 Spro_2908 Serratia proteamaculans 568 nitrate ABC transporter inner membrane subunit YP_001479137.1 3199971 R 399741 CDS YP_001479138.1 157371149 5603324 complement(3200876..3202135) 1 NC_009832.1 KEGG: eca:ECA2994 nitrate-binding proteint; nitrate-binding proteint 3202135 5603324 Spro_2909 Serratia proteamaculans 568 nitrate-binding proteint YP_001479138.1 3200876 R 399741 CDS YP_001479139.1 157371150 5603325 complement(3202640..3203920) 1 NC_009832.1 PFAM: ANTAR domain protein; Nitrate and nitrite sensing domain protein; KEGG: eca:ECA2995 nitrate-and nitrite-responsive positive regulator; response regulator receiver/ANTAR domain-containing protein 3203920 5603325 Spro_2910 Serratia proteamaculans 568 response regulator receiver/ANTAR domain-containing protein YP_001479139.1 3202640 R 399741 CDS YP_001479140.1 157371151 5603326 complement(3203978..3205552) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: psp:PSPPH_2742 ABC transporter, periplasmic oligopeptide-binding protein; extracellular solute-binding protein 3205552 5603326 Spro_2911 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479140.1 3203978 R 399741 CDS YP_001479141.1 157371152 5603327 complement(3205702..3206373) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2060 ABC transporter related; ABC transporter-like protein 3206373 5603327 Spro_2912 Serratia proteamaculans 568 ABC transporter-like protein YP_001479141.1 3205702 R 399741 CDS YP_001479142.1 157371153 5603328 complement(3206370..3207206) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_2059 ABC transporter related; ABC transporter-like protein 3207206 5603328 Spro_2913 Serratia proteamaculans 568 ABC transporter-like protein YP_001479142.1 3206370 R 399741 CDS YP_001479143.1 157371154 5603329 complement(3207196..3208065) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2058 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3208065 5603329 Spro_2914 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479143.1 3207196 R 399741 CDS YP_001479144.1 157371155 5603330 complement(3208062..3209114) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2057 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3209114 5603330 Spro_2915 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479144.1 3208062 R 399741 CDS YP_001479145.1 157371156 5603334 complement(3209114..3210682) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: mmw:Mmwyl1_2056 extracellular solute-binding protein family 5; 4-phytase 3210682 5603334 Spro_2916 Serratia proteamaculans 568 4-phytase YP_001479145.1 3209114 R 399741 CDS YP_001479146.1 157371157 5603335 complement(3210859..3211812) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE2474 putative LysR-family transcriptional regulatory protein; transcriptional regulator CysB-like protein 3211812 5603335 Spro_2917 Serratia proteamaculans 568 transcriptional regulator CysB-like protein YP_001479146.1 3210859 R 399741 CDS YP_001479147.1 157371158 5603336 complement(3212112..3212852) 1 NC_009832.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: ecs:ECs1723 cation transport regulator; ChaC family protein 3212852 5603336 Spro_2918 Serratia proteamaculans 568 ChaC family protein YP_001479147.1 3212112 R 399741 CDS YP_001479148.1 157371159 5603346 3213313..3214131 1 NC_009832.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: yen:YE2476 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein 3214131 5603346 Spro_2919 Serratia proteamaculans 568 FAD-binding 9 siderophore-interacting domain-containing protein YP_001479148.1 3213313 D 399741 CDS YP_001479149.1 157371160 5603347 3214446..3215546 1 NC_009832.1 TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: ypi:YpsIP31758_2124 calcium/proton antiporter; calcium/sodium:proton antiporter 3215546 5603347 Spro_2920 Serratia proteamaculans 568 calcium/sodium:proton antiporter YP_001479149.1 3214446 D 399741 CDS YP_001479150.1 157371161 5603348 complement(3215597..3216547) 1 NC_009832.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: kpn:KPN_02997 hypothetical protein; aspartyl/asparaginyl beta-hydroxylase 3216547 5603348 Spro_2921 Serratia proteamaculans 568 aspartyl/asparaginyl beta-hydroxylase YP_001479150.1 3215597 R 399741 CDS YP_001479151.1 157371162 5603349 3216919..3219252 1 NC_009832.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY2332 putative anaerobic DMSO reductase chain A precursor; molybdopterin oxidoreductase 3219252 5603349 Spro_2922 Serratia proteamaculans 568 molybdopterin oxidoreductase YP_001479151.1 3216919 D 399741 CDS YP_001479152.1 157371163 5603350 3219255..3219809 1 NC_009832.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dsy:DSY2331 putative anaerobic DMSO reductase chain B iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3219809 5603350 Spro_2923 Serratia proteamaculans 568 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001479152.1 3219255 D 399741 CDS YP_001479153.1 157371164 5603351 3219815..3220684 1 NC_009832.1 KEGG: dsy:DSY2330 putative anaerobic DMSO reductase chain C anchor subunit; putative anaerobic DMSO reductase chain C anchor subunit 3220684 5603351 Spro_2924 Serratia proteamaculans 568 putative anaerobic DMSO reductase chain C anchor subunit YP_001479153.1 3219815 D 399741 CDS YP_001479154.1 157371165 5603352 complement(3220756..3221541) 1 NC_009832.1 PFAM: PhoH family protein; KEGG: ypi:YpsIP31758_2125 putative PhoH protein; hypothetical protein 3221541 5603352 Spro_2925 Serratia proteamaculans 568 hypothetical protein YP_001479154.1 3220756 R 399741 CDS YP_001479155.1 157371166 5603353 complement(3222226..3224373) 1 NC_009832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_2099 TonB-dependent siderophore receptor; TonB-dependent receptor 3224373 5603353 Spro_2926 Serratia proteamaculans 568 TonB-dependent receptor YP_001479155.1 3222226 R 399741 CDS YP_001479156.1 157371167 5603354 complement(3224586..3225878) 1 NC_009832.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: yps:YPTB1727 putative iron-dependent peroxidase; Dyp-type peroxidase family protein 3225878 5603354 Spro_2927 Serratia proteamaculans 568 Dyp-type peroxidase family protein YP_001479156.1 3224586 R 399741 CDS YP_001479157.1 157371168 5603355 complement(3225889..3227025) 1 NC_009832.1 KEGG: yen:YE1939 hypothetical protein; hypothetical protein 3227025 5603355 Spro_2928 Serratia proteamaculans 568 hypothetical protein YP_001479157.1 3225889 R 399741 CDS YP_001479158.1 157371169 5603356 complement(3227044..3227889) 1 NC_009832.1 PFAM: iron permease FTR1; KEGG: ypp:YPDSF_1271 membrane protein; iron permease FTR1 3227889 5603356 Spro_2929 Serratia proteamaculans 568 iron permease FTR1 YP_001479158.1 3227044 R 399741 CDS YP_001479159.1 157371170 5603357 complement(3228300..3229784) 1 NC_009832.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: yen:YE1934 proline permease; sodium/proline symporter 3229784 5603357 Spro_2930 Serratia proteamaculans 568 sodium/proline symporter YP_001479159.1 3228300 R 399741 CDS YP_001479160.1 157371171 5603358 3230331..3234302 1 NC_009832.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3234302 putA 5603358 putA Serratia proteamaculans 568 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001479160.1 3230331 D 399741 CDS YP_001479161.1 157371172 5603359 3234469..3234651 1 NC_009832.1 PFAM: YcfA family protein; KEGG: ypn:YPN_2306 hypothetical protein; YcfA family protein 3234651 5603359 Spro_2932 Serratia proteamaculans 568 YcfA family protein YP_001479161.1 3234469 D 399741 CDS YP_001479162.1 157371173 5603360 3234683..3235096 1 NC_009832.1 PFAM: protein of unknown function UPF0150; KEGG: ypi:YpsIP31758_2305 hypothetical protein; hypothetical protein 3235096 5603360 Spro_2933 Serratia proteamaculans 568 hypothetical protein YP_001479162.1 3234683 D 399741 CDS YP_001479163.1 157371174 5603361 complement(3235128..3235880) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2514 putative amino-acid ABC transporter (ATP-binding protein); putative amino-acid ABC transporter ATP-binding protein YecC 3235880 5603361 Spro_2934 Serratia proteamaculans 568 putative amino-acid ABC transporter ATP-binding protein YecC YP_001479163.1 3235128 R 399741 CDS YP_001479164.1 157371175 5603362 complement(3235884..3236546) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2273 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 3236546 5603362 Spro_2935 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001479164.1 3235884 R 399741 CDS YP_001479165.1 157371176 5603363 complement(3236546..3237343) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: yen:YE2516 putative cystine-binding periplasmic protein; cystine transporter subunit 3237343 5603363 Spro_2936 Serratia proteamaculans 568 cystine transporter subunit YP_001479165.1 3236546 R 399741 CDS YP_001479166.1 157371177 5603371 complement(3237461..3238453) 1 NC_009832.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 3238453 5603371 Spro_2937 Serratia proteamaculans 568 D-cysteine desulfhydrase YP_001479166.1 3237461 R 399741 CDS YP_001479167.1 157371178 5603372 complement(3238581..3239090) 1 NC_009832.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 3239090 5603372 Spro_2938 Serratia proteamaculans 568 flagella biosynthesis protein FliZ YP_001479167.1 3238581 R 399741 CDS YP_001479168.1 157371179 5603385 complement(3239148..3239870) 1 NC_009832.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 3239870 fliA 5603385 fliA Serratia proteamaculans 568 flagellar biosynthesis sigma factor YP_001479168.1 3239148 R 399741 CDS YP_001479169.1 157371180 5603386 complement(3240055..3241293) 1 NC_009832.1 PFAM: flagellin domain protein; KEGG: stt:t0918 flagellin; flagellin domain-containing protein 3241293 5603386 Spro_2940 Serratia proteamaculans 568 flagellin domain-containing protein YP_001479169.1 3240055 R 399741 CDS YP_001479170.1 157371181 5603387 3241575..3242972 1 NC_009832.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: yen:YE2524 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 3242972 5603387 Spro_2941 Serratia proteamaculans 568 flagellar hook-associated 2 domain-containing protein YP_001479170.1 3241575 D 399741 CDS YP_001479171.1 157371182 5603391 3243000..3243410 1 NC_009832.1 flagellin specific chaperone; flagellar protein FliS 3243410 fliS 5603391 fliS Serratia proteamaculans 568 flagellar protein FliS YP_001479171.1 3243000 D 399741 CDS YP_001479172.1 157371183 5603392 3243410..3243778 1 NC_009832.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT 3243778 5603392 Spro_2943 Serratia proteamaculans 568 flagellar biosynthesis protein FliT YP_001479172.1 3243410 D 399741 CDS YP_001479173.1 157371184 5603393 3244127..3244993 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE2527 putative AraC-family transcriptional regulatory protein; AraC family transcriptional regulator 3244993 5603393 Spro_2944 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479173.1 3244127 D 399741 CDS YP_001479174.1 157371185 5603397 complement(3245754..3246008) 1 NC_009832.1 hypothetical protein 3246008 5603397 Spro_2945 Serratia proteamaculans 568 hypothetical protein YP_001479174.1 3245754 R 399741 CDS YP_001479175.1 157371186 5603398 complement(3246469..3246783) 1 NC_009832.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: eca:ECA1727 flagellar hook-basal body complex protein; flagellar hook-basal body complex subunit FliE 3246783 5603398 Spro_2946 Serratia proteamaculans 568 flagellar hook-basal body complex subunit FliE YP_001479175.1 3246469 R 399741 CDS YP_001479176.1 157371187 5603399 3247217..3248908 1 NC_009832.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 3248908 fliF 5603399 fliF Serratia proteamaculans 568 flagellar MS-ring protein YP_001479176.1 3247217 D 399741 CDS YP_001479177.1 157371188 5603400 3248905..3249897 1 NC_009832.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 3249897 fliG 5603400 fliG Serratia proteamaculans 568 flagellar motor switch protein G YP_001479177.1 3248905 D 399741 CDS YP_001479178.1 157371189 5603401 3249890..3250594 1 NC_009832.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 3250594 fliH 5603401 fliH Serratia proteamaculans 568 flagellar assembly protein H YP_001479178.1 3249890 D 399741 CDS YP_001479179.1 157371190 5603402 3250594..3251955 1 NC_009832.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3251955 fliI 5603402 fliI Serratia proteamaculans 568 flagellum-specific ATP synthase YP_001479179.1 3250594 D 399741 CDS YP_001479180.1 157371191 5603437 3251978..3252424 1 NC_009832.1 rod/hook and filament chaperone; flagellar biosynthesis chaperone 3252424 fliJ 5603437 fliJ Serratia proteamaculans 568 flagellar biosynthesis chaperone YP_001479180.1 3251978 D 399741 CDS YP_001479181.1 157371192 5603438 3252421..3253644 1 NC_009832.1 PFAM: flagellar hook-length control protein; KEGG: ypi:YpsIP31758_2295 flagellar hook-length control protein; flagellar hook-length control protein 3253644 5603438 Spro_2952 Serratia proteamaculans 568 flagellar hook-length control protein YP_001479181.1 3252421 D 399741 CDS YP_001479182.1 157371193 5603439 3253781..3254266 1 NC_009832.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 3254266 fliL 5603439 fliL Serratia proteamaculans 568 flagellar basal body-associated protein FliL YP_001479182.1 3253781 D 399741 CDS YP_001479183.1 157371194 5603440 3254272..3255273 1 NC_009832.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 3255273 fliM 5603440 fliM Serratia proteamaculans 568 flagellar motor switch protein FliM YP_001479183.1 3254272 D 399741 CDS YP_001479184.1 157371195 5603441 3255270..3255683 1 NC_009832.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN 3255683 fliN 5603441 fliN Serratia proteamaculans 568 flagellar motor switch protein FliN YP_001479184.1 3255270 D 399741 CDS YP_001479185.1 157371196 5603442 3255683..3256105 1 NC_009832.1 PFAM: flagellar biosynthesis protein FliO; KEGG: ypi:YpsIP31758_2301 flagellar protein FliO; flagellar biosynthesis protein FliO 3256105 5603442 Spro_2956 Serratia proteamaculans 568 flagellar biosynthesis protein FliO YP_001479185.1 3255683 D 399741 CDS YP_001479186.1 157371197 5603451 3256102..3256926 1 NC_009832.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 3256926 fliP 5603451 fliP Serratia proteamaculans 568 flagellar biosynthesis protein FliP YP_001479186.1 3256102 D 399741 CDS YP_001479187.1 157371198 5603452 3256939..3257208 1 NC_009832.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 3257208 fliQ 5603452 fliQ Serratia proteamaculans 568 flagellar biosynthesis protein FliQ YP_001479187.1 3256939 D 399741 CDS YP_001479188.1 157371199 5603453 3257211..3257993 1 NC_009832.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 3257993 fliR 5603453 fliR Serratia proteamaculans 568 flagellar biosynthesis protein FliR YP_001479188.1 3257211 D 399741 CDS YP_001479189.1 157371200 5603473 complement(3258858..3259817) 1 NC_009832.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: yen:YE2550 flagellar hook-associated protein 3; flagellar hook-associated protein 3 3259817 5603473 Spro_2960 Serratia proteamaculans 568 flagellar hook-associated protein 3 YP_001479189.1 3258858 R 399741 CDS YP_001479190.1 157371201 5603474 complement(3259876..3261522) 1 NC_009832.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 3261522 flgK 5603474 flgK Serratia proteamaculans 568 flagellar hook-associated protein FlgK YP_001479190.1 3259876 R 399741 CDS YP_001479191.1 157371202 5603475 complement(3261795..3262751) 1 NC_009832.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 3262751 flgJ 5603475 flgJ Serratia proteamaculans 568 flagellar rod assembly protein/muramidase FlgJ YP_001479191.1 3261795 R 399741 CDS YP_001479192.1 157371203 5603476 complement(3262751..3263851) 1 NC_009832.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3263851 flgI 5603476 flgI Serratia proteamaculans 568 flagellar basal body P-ring protein YP_001479192.1 3262751 R 399741 CDS YP_001479193.1 157371204 5603477 complement(3263862..3264563) 1 NC_009832.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 3264563 flgH 5603477 flgH Serratia proteamaculans 568 flagellar basal body L-ring protein YP_001479193.1 3263862 R 399741 CDS YP_001479194.1 157371205 5603478 complement(3264799..3265581) 1 NC_009832.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 3265581 flgG 5603478 flgG Serratia proteamaculans 568 flagellar basal body rod protein FlgG YP_001479194.1 3264799 R 399741 CDS YP_001479195.1 157371206 5603482 complement(3265600..3266355) 1 NC_009832.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Yersinia contains two copies of this and other flagella genes; flagellar basal body rod protein FlgF 3266355 5603482 Spro_2966 Serratia proteamaculans 568 flagellar basal body rod protein FlgF YP_001479195.1 3265600 R 399741 CDS YP_001479196.1 157371207 5603483 complement(3266368..3267591) 1 NC_009832.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 3267591 flgE 5603483 flgE Serratia proteamaculans 568 flagellar hook protein FlgE YP_001479196.1 3266368 R 399741 CDS YP_001479197.1 157371208 5603484 complement(3267662..3268339) 1 NC_009832.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 3268339 flgD 5603484 flgD Serratia proteamaculans 568 flagellar basal body rod modification protein YP_001479197.1 3267662 R 399741 CDS YP_001479198.1 157371209 5603491 complement(3268352..3268756) 1 NC_009832.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 3268756 flgC 5603491 flgC Serratia proteamaculans 568 flagellar basal body rod protein FlgC YP_001479198.1 3268352 R 399741 CDS YP_001479199.1 157371210 5603492 complement(3268762..3269175) 1 NC_009832.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 3269175 flgB 5603492 flgB Serratia proteamaculans 568 flagellar basal body rod protein FlgB YP_001479199.1 3268762 R 399741 CDS YP_001479200.1 157371211 5603493 3269336..3269989 1 NC_009832.1 PFAM: SAF domain protein; KEGG: yen:YE2561 flagella basal body P-ring formation protein FlgA; SAF domain-containing protein 3269989 5603493 Spro_2971 Serratia proteamaculans 568 SAF domain-containing protein YP_001479200.1 3269336 D 399741 CDS YP_001479201.1 157371212 5603522 3270112..3270438 1 NC_009832.1 regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 3270438 5603522 Spro_2972 Serratia proteamaculans 568 anti-sigma-28 factor FlgM YP_001479201.1 3270112 D 399741 CDS YP_001479202.1 157371213 5603523 3270485..3270919 1 NC_009832.1 PFAM: FlgN family protein; KEGG: yen:YE2563 flagella synthesis protein FlgN; FlgN family protein 3270919 5603523 Spro_2973 Serratia proteamaculans 568 FlgN family protein YP_001479202.1 3270485 D 399741 CDS YP_001479203.1 157371214 5603524 3271237..3271539 1 NC_009832.1 KEGG: swi:Swit_0156 transcriptional regulator-like protein; XRE family transcriptional regulator 3271539 5603524 Spro_2974 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001479203.1 3271237 D 399741 CDS YP_001479204.1 157371215 5603529 complement(3271544..3271948) 1 NC_009832.1 PFAM: flagellar FlhE family protein; KEGG: ypi:YpsIP31758_2332 flagellar protein FlhE; flagellar FlhE family protein 3271948 5603529 Spro_2975 Serratia proteamaculans 568 flagellar FlhE family protein YP_001479204.1 3271544 R 399741 CDS YP_001479205.1 157371216 5603530 complement(3271948..3274026) 1 NC_009832.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3274026 flhA 5603530 flhA Serratia proteamaculans 568 flagellar biosynthesis protein FlhA YP_001479205.1 3271948 R 399741 CDS YP_001479206.1 157371217 5603531 complement(3274019..3275215) 1 NC_009832.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Yersinia has 2 copies of flhB; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB 3275215 flhB 5603531 flhB Serratia proteamaculans 568 flagellar biosynthesis protein FlhB YP_001479206.1 3274019 R 399741 CDS YP_001479207.1 157371218 5603720 complement(3275347..3275991) 1 NC_009832.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 3275991 5603720 Spro_2978 Serratia proteamaculans 568 chemotaxis regulator CheZ YP_001479207.1 3275347 R 399741 CDS YP_001479208.1 157371219 5603721 complement(3276003..3276392) 1 NC_009832.1 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY 3276392 5603721 Spro_2979 Serratia proteamaculans 568 chemotaxis regulatory protein CheY YP_001479208.1 3276003 R 399741 CDS YP_001479209.1 157371220 5603722 complement(3276644..3277693) 1 NC_009832.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3277693 5603722 Spro_2980 Serratia proteamaculans 568 chemotaxis-specific methylesterase YP_001479209.1 3276644 R 399741 CDS YP_001479210.1 157371221 5603726 complement(3277693..3278565) 1 NC_009832.1 methylates the MCP; chemotaxis methyltransferase CheR 3278565 5603726 Spro_2981 Serratia proteamaculans 568 chemotaxis methyltransferase CheR YP_001479210.1 3277693 R 399741 CDS YP_001479211.1 157371222 5603727 complement(3278594..3280219) 1 NC_009832.1 PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2573 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3280219 5603727 Spro_2982 Serratia proteamaculans 568 methyl-accepting chemotaxis sensory transducer YP_001479211.1 3278594 R 399741 CDS YP_001479212.1 157371223 5603728 complement(3280355..3282025) 1 NC_009832.1 PFAM: ligand binding Tar domain protein; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: yen:YE2575 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3282025 5603728 Spro_2983 Serratia proteamaculans 568 methyl-accepting chemotaxis sensory transducer YP_001479212.1 3280355 R 399741 CDS YP_001479213.1 157371224 5603770 complement(3282384..3282884) 1 NC_009832.1 PFAM: CheW domain protein; KEGG: ypi:YpsIP31758_1639 chemotaxis protein CheW; purine-binding chemotaxis protein 3282884 5603770 Spro_2984 Serratia proteamaculans 568 purine-binding chemotaxis protein YP_001479213.1 3282384 R 399741 CDS YP_001479214.1 157371225 5603771 complement(3282917..3284884) 1 NC_009832.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 3284884 5603771 Spro_2985 Serratia proteamaculans 568 chemotaxis protein CheA YP_001479214.1 3282917 R 399741 CDS YP_001479215.1 157371226 5603772 complement(3284895..3285860) 1 NC_009832.1 PFAM: OmpA/MotB domain protein; KEGG: yen:YE2578 chemotaxis MotB protein; OmpA/MotB domain-containing protein 3285860 5603772 Spro_2986 Serratia proteamaculans 568 OmpA/MotB domain-containing protein YP_001479215.1 3284895 R 399741 CDS YP_001479216.1 157371227 5603799 complement(3285857..3286753) 1 NC_009832.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 3286753 5603799 Spro_2987 Serratia proteamaculans 568 flagellar motor protein MotA YP_001479216.1 3285857 R 399741 CDS YP_001479217.1 157371228 5603800 complement(3286906..3287487) 1 NC_009832.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 3287487 5603800 Spro_2988 Serratia proteamaculans 568 transcriptional activator FlhC YP_001479217.1 3286906 R 399741 CDS YP_001479218.1 157371229 5603801 complement(3287490..3287840) 1 NC_009832.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 3287840 5603801 Spro_2989 Serratia proteamaculans 568 transcriptional activator FlhD YP_001479218.1 3287490 R 399741 CDS YP_001479219.1 157371230 5603842 3289221..3289436 1 NC_009832.1 PFAM: Haemolysin expression modulating family protein; KEGG: ecp:ECP_1570 hypothetical protein YdgT; hemolysin expression modulating family protein 3289436 5603842 Spro_2990 Serratia proteamaculans 568 hemolysin expression modulating family protein YP_001479219.1 3289221 D 399741 CDS YP_001479220.1 157371231 5603843 3289587..3290006 1 NC_009832.1 ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspC 3290006 5603843 Spro_2991 Serratia proteamaculans 568 universal stress protein UspC YP_001479220.1 3289587 D 399741 CDS YP_001479221.1 157371232 5603844 3290083..3291117 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: yen:YE2584 putative oxidoreductase; alcohol dehydrogenase 3291117 5603844 Spro_2992 Serratia proteamaculans 568 alcohol dehydrogenase YP_001479221.1 3290083 D 399741 CDS YP_001479222.1 157371233 5603850 complement(3291233..3291880) 1 NC_009832.1 KEGG: rso:RSp0259 probable pyrrolidone-carboxylate peptidase protein; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 3291880 5603850 Spro_2993 Serratia proteamaculans 568 pyrrolidone-carboxylate peptidase YP_001479222.1 3291233 R 399741 CDS YP_001479223.1 157371234 5603851 3291978..3292910 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO6255 putative transcriptional regulatory protein, LysR-family; LysR family transcriptional regulator 3292910 5603851 Spro_2994 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479223.1 3291978 D 399741 CDS YP_001479224.1 157371235 5603852 3293668..3293955 1 NC_009832.1 hypothetical protein 3293955 5603852 Spro_2995 Serratia proteamaculans 568 hypothetical protein YP_001479224.1 3293668 D 399741 CDS YP_001479225.1 157371236 5603856 3294022..3294522 1 NC_009832.1 hypothetical protein 3294522 5603856 Spro_2996 Serratia proteamaculans 568 hypothetical protein YP_001479225.1 3294022 D 399741 CDS YP_001479226.1 157371237 5603857 3294549..3295079 1 NC_009832.1 KEGG: bpa:BPP0727 putative lipoprotein; putative lipoprotein 3295079 5603857 Spro_2997 Serratia proteamaculans 568 putative lipoprotein YP_001479226.1 3294549 D 399741 CDS YP_001479227.1 157371238 5603858 3295120..3296466 1 NC_009832.1 PFAM: protein of unknown function DUF876; KEGG: bbr:BB0814 hypothetical protein; hypothetical protein 3296466 5603858 Spro_2998 Serratia proteamaculans 568 hypothetical protein YP_001479227.1 3295120 D 399741 CDS YP_001479228.1 157371239 5603877 3296470..3297690 1 NC_009832.1 PFAM: OmpA/MotB domain protein; KEGG: bbr:BB0815 hypothetical protein; hypothetical protein 3297690 5603877 Spro_2999 Serratia proteamaculans 568 hypothetical protein YP_001479228.1 3296470 D 399741 CDS YP_001479229.1 157371240 5603878 3297690..3301328 1 NC_009832.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bbr:BB0816 hypothetical protein; ImcF domain-containing protein 3301328 5603878 Spro_3000 Serratia proteamaculans 568 ImcF domain-containing protein YP_001479229.1 3297690 D 399741 CDS YP_001479230.1 157371241 5603879 3301343..3302065 1 NC_009832.1 KEGG: bbr:BB0817 hypothetical protein; hypothetical protein 3302065 5603879 Spro_3001 Serratia proteamaculans 568 hypothetical protein YP_001479230.1 3301343 D 399741 CDS YP_001479231.1 157371242 5603880 3302089..3303114 1 NC_009832.1 PFAM: ImpA domain protein; KEGG: bbr:BB0799 hypothetical protein; ImpA domain-containing protein 3303114 5603880 Spro_3002 Serratia proteamaculans 568 ImpA domain-containing protein YP_001479231.1 3302089 D 399741 CDS YP_001479232.1 157371243 5603881 3303219..3303755 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: azo:azo3895 putative cytoplasmic protein,SciH; hypothetical protein 3303755 5603881 Spro_3003 Serratia proteamaculans 568 hypothetical protein YP_001479232.1 3303219 D 399741 CDS YP_001479233.1 157371244 5603882 3303759..3305264 1 NC_009832.1 PFAM: protein of unknown function DUF877; KEGG: bbr:BB0801 hypothetical protein; hypothetical protein 3305264 5603882 Spro_3004 Serratia proteamaculans 568 hypothetical protein YP_001479233.1 3303759 D 399741 CDS YP_001479234.1 157371245 5603889 3305545..3306027 1 NC_009832.1 PFAM: protein of unknown function DUF796; KEGG: aav:Aave_1465 protein of unknown function DUF796; hypothetical protein 3306027 5603889 Spro_3005 Serratia proteamaculans 568 hypothetical protein YP_001479234.1 3305545 D 399741 CDS YP_001479235.1 157371246 5603890 3306251..3307969 1 NC_009832.1 PFAM: Forkhead-associated protein; KEGG: azo:azo3884 hypothetical regulatory protein; FHA domain-containing protein 3307969 5603890 Spro_3006 Serratia proteamaculans 568 FHA domain-containing protein YP_001479235.1 3306251 D 399741 CDS YP_001479236.1 157371247 5603891 3307969..3308742 1 NC_009832.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: aav:Aave_1469 protein serine/threonine phosphatase; protein serine/threonine phosphatase 3308742 5603891 Spro_3007 Serratia proteamaculans 568 protein serine/threonine phosphatase YP_001479236.1 3307969 D 399741 CDS YP_001479237.1 157371248 5603965 3308773..3309759 1 NC_009832.1 hypothetical protein 3309759 5603965 Spro_3008 Serratia proteamaculans 568 hypothetical protein YP_001479237.1 3308773 D 399741 CDS YP_001479238.1 157371249 5603966 3309777..3310592 1 NC_009832.1 PFAM: virulence protein SciE type; KEGG: bbr:BB0803 hypothetical protein; virulence protein SciE type 3310592 5603966 Spro_3009 Serratia proteamaculans 568 virulence protein SciE type YP_001479238.1 3309777 D 399741 CDS YP_001479239.1 157371250 5603967 3310595..3311170 1 NC_009832.1 PFAM: GPW/gp25 family protein; KEGG: bbr:BB0804 hypothetical protein; GPW/gp25 family protein 3311170 5603967 Spro_3010 Serratia proteamaculans 568 GPW/gp25 family protein YP_001479239.1 3310595 D 399741 CDS YP_001479240.1 157371251 5604012 3311175..3313061 1 NC_009832.1 PFAM: protein of unknown function DUF879; KEGG: bbr:BB0805 hypothetical protein; hypothetical protein 3313061 5604012 Spro_3011 Serratia proteamaculans 568 hypothetical protein YP_001479240.1 3311175 D 399741 CDS YP_001479241.1 157371252 5604013 3313058..3314131 1 NC_009832.1 PFAM: protein of unknown function DUF1305; KEGG: bbr:BB0807 hypothetical protein; hypothetical protein 3314131 5604013 Spro_3012 Serratia proteamaculans 568 hypothetical protein YP_001479241.1 3313058 D 399741 CDS YP_001479242.1 157371253 5604014 3314184..3316847 1 NC_009832.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pmy:Pmen_2331 ATPase AAA-2 domain protein; ATPase 3316847 5604014 Spro_3013 Serratia proteamaculans 568 ATPase YP_001479242.1 3314184 D 399741 CDS YP_001479243.1 157371254 5604027 3316896..3318338 1 NC_009832.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase; serine/threonine protein kinase 3318338 5604027 Spro_3014 Serratia proteamaculans 568 serine/threonine protein kinase YP_001479243.1 3316896 D 399741 CDS YP_001479244.1 157371255 5604028 3318424..3320361 1 NC_009832.1 PFAM: Rhs element Vgr protein; KEGG: bbr:BB0793 hypothetical protein; Rhs element Vgr protein 3320361 5604028 Spro_3015 Serratia proteamaculans 568 Rhs element Vgr protein YP_001479244.1 3318424 D 399741 CDS YP_001479245.1 157371256 5604038 3320375..3321181 1 NC_009832.1 PFAM: Domain of unknown function DUF1795; KEGG: rso:RSc3427 hypothetical protein; hypothetical protein 3321181 5604038 Spro_3016 Serratia proteamaculans 568 hypothetical protein YP_001479245.1 3320375 D 399741 CDS YP_001479246.1 157371257 5604039 3321185..3322519 1 NC_009832.1 PFAM: PAAR repeat-containing protein; KEGG: rso:RSc3426 probable transmembrane protein; PAAR repeat-containing protein 3322519 5604039 Spro_3017 Serratia proteamaculans 568 PAAR repeat-containing protein YP_001479246.1 3321185 D 399741 CDS YP_001479247.1 157371258 5604040 3322516..3323616 1 NC_009832.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: ppf:Pput_1073 ADP-ribosyl-(dinitrogen reductase) hydrolase; ADP-ribosyl-(dinitrogen reductase) hydrolase 3323616 5604040 Spro_3018 Serratia proteamaculans 568 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_001479247.1 3322516 D 399741 CDS YP_001479248.1 157371259 5604041 3324102..3324584 1 NC_009832.1 PFAM: protein of unknown function DUF796; KEGG: bpa:BPP0716 hypothetical protein; hypothetical protein 3324584 5604041 Spro_3019 Serratia proteamaculans 568 hypothetical protein YP_001479248.1 3324102 D 399741 CDS YP_001479249.1 157371260 5604042 3324599..3325507 1 NC_009832.1 hypothetical protein 3325507 5604042 Spro_3020 Serratia proteamaculans 568 hypothetical protein YP_001479249.1 3324599 D 399741 CDS YP_001479250.1 157371261 5604043 complement(3325601..3326071) 1 NC_009832.1 PFAM: transcription activator effector binding; KEGG: yen:YE2070 DNA gyrase inhibitory protein; DNA gyrase inhibitor 3326071 5604043 Spro_3021 Serratia proteamaculans 568 DNA gyrase inhibitor YP_001479250.1 3325601 R 399741 CDS YP_001479251.1 157371262 5604053 complement(3326104..3326946) 1 NC_009832.1 PFAM: tryptophan 23-dioxygenase; KEGG: mxa:MXAN_7400 putative tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase 3326946 5604053 Spro_3022 Serratia proteamaculans 568 tryptophan 23-dioxygenase YP_001479251.1 3326104 R 399741 CDS YP_001479252.1 157371263 5604054 complement(3327144..3327659) 1 NC_009832.1 PFAM: MaoC domain protein dehydratase; KEGG: stp:Strop_0462 MaoC domain protein dehydratase; dehydratase 3327659 5604054 Spro_3023 Serratia proteamaculans 568 dehydratase YP_001479252.1 3327144 R 399741 CDS YP_001479253.1 157371264 5604055 complement(3327653..3328609) 1 NC_009832.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: stp:Strop_0460 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase 3328609 5604055 Spro_3024 Serratia proteamaculans 568 ornithine cyclodeaminase YP_001479253.1 3327653 R 399741 CDS YP_001479254.1 157371265 5604073 complement(3328606..3329607) 1 NC_009832.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 3329607 5604073 Spro_3025 Serratia proteamaculans 568 4-hydroxy-2-ketovalerate aldolase YP_001479254.1 3328606 R 399741 CDS YP_001479255.1 157371266 5604074 complement(3329591..3330478) 1 NC_009832.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 3330478 5604074 Spro_3026 Serratia proteamaculans 568 acetaldehyde dehydrogenase YP_001479255.1 3329591 R 399741 CDS YP_001479256.1 157371267 5604075 complement(3330475..3331338) 1 NC_009832.1 PFAM: HpcH/HpaI aldolase; KEGG: stp:Strop_0459 HpcH/HpaI aldolase; HpcH/HpaI aldolase 3331338 5604075 Spro_3027 Serratia proteamaculans 568 HpcH/HpaI aldolase YP_001479256.1 3330475 R 399741 CDS YP_001479257.1 157371268 5604085 complement(3331335..3332558) 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: stp:Strop_0458 aminotransferase, class I and II; hypothetical protein 3332558 5604085 Spro_3028 Serratia proteamaculans 568 hypothetical protein YP_001479257.1 3331335 R 399741 CDS YP_001479258.1 157371269 5604086 complement(3332558..3333397) 1 NC_009832.1 KEGG: stp:Strop_0457 transcription factor jumonji, JmjC domain protein; transcription factor jumonji domain-containing protein 3333397 5604086 Spro_3029 Serratia proteamaculans 568 transcription factor jumonji domain-containing protein YP_001479258.1 3332558 R 399741 CDS YP_001479259.1 157371270 5604087 complement(3333457..3334683) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2693 major facilitator superfamily MFS_1; major facilitator transporter 3334683 5604087 Spro_3030 Serratia proteamaculans 568 major facilitator transporter YP_001479259.1 3333457 R 399741 CDS YP_001479260.1 157371271 5604103 3335216..3336433 1 NC_009832.1 PFAM: creatinase; peptidase M24; KEGG: sfr:Sfri_3046 peptidase M24; peptidase M24 3336433 5604103 Spro_3031 Serratia proteamaculans 568 peptidase M24 YP_001479260.1 3335216 D 399741 CDS YP_001479261.1 157371272 5604104 complement(3337535..3339067) 1 NC_009832.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcription regulator 3339067 5604104 Spro_3032 Serratia proteamaculans 568 anaerobic nitric oxide reductase transcription regulator YP_001479261.1 3337535 R 399741 CDS YP_001479262.1 157371273 5604105 3339222..3340679 1 NC_009832.1 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 3340679 5604105 Spro_3033 Serratia proteamaculans 568 anaerobic nitric oxide reductase flavorubredoxin YP_001479262.1 3339222 D 399741 CDS YP_001479263.1 157371274 5604109 3340676..3341815 1 NC_009832.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 3341815 5604109 Spro_3034 Serratia proteamaculans 568 nitric oxide reductase YP_001479263.1 3340676 D 399741 CDS YP_001479264.1 157371275 5604110 3342282..3345308 1 NC_009832.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Pertactin; Autotransporter beta- domain protein; KEGG: psb:Psyr_2034 outer membrane autotransporter barrel; outer membrane autotransporter 3345308 5604110 Spro_3035 Serratia proteamaculans 568 outer membrane autotransporter YP_001479264.1 3342282 D 399741 CDS YP_001479265.1 157371276 5604111 complement(3345422..3346255) 1 NC_009832.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_01537 putative transcriptional repressor (IclR family); IclR family transcriptional regulator 3346255 5604111 Spro_3036 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001479265.1 3345422 R 399741 CDS YP_001479266.1 157371277 5604118 3346435..3347121 1 NC_009832.1 KEGG: kpn:KPN_01538 acetyl-CoA:acetoacetyl-CoA transferase alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3347121 5604118 Spro_3037 Serratia proteamaculans 568 3-oxoacid CoA-transferase subunit A YP_001479266.1 3346435 D 399741 CDS YP_001479267.1 157371278 5604119 3347133..3347813 1 NC_009832.1 KEGG: kpn:KPN_01539 acetyl-CoA:acetoacetyl-CoA transferase beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3347813 5604119 Spro_3038 Serratia proteamaculans 568 3-oxoacid CoA-transferase subunit B YP_001479267.1 3347133 D 399741 CDS YP_001479268.1 157371279 5604120 3347791..3348993 1 NC_009832.1 TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: kpn:KPN_01540 acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase 3348993 5604120 Spro_3039 Serratia proteamaculans 568 beta-ketoadipyl CoA thiolase YP_001479268.1 3347791 D 399741 CDS YP_001479269.1 157371280 5604121 3349008..3349769 1 NC_009832.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: kpn:KPN_01542 putative 3-oxoadipate enol-lactonase II; 3-oxoadipate enol-lactonase 3349769 5604121 Spro_3040 Serratia proteamaculans 568 3-oxoadipate enol-lactonase YP_001479269.1 3349008 D 399741 CDS YP_001479270.1 157371281 5604122 3349902..3350081 1 NC_009832.1 hypothetical protein 3350081 5604122 Spro_3041 Serratia proteamaculans 568 hypothetical protein YP_001479270.1 3349902 D 399741 CDS YP_001479271.1 157371282 5604123 3350255..3350896 1 NC_009832.1 KEGG: fjo:Fjoh_2212 hypothetical protein; hypothetical protein 3350896 5604123 Spro_3042 Serratia proteamaculans 568 hypothetical protein YP_001479271.1 3350255 D 399741 CDS YP_001479272.1 157371283 5604136 3350899..3351672 1 NC_009832.1 KEGG: csa:Csal_1644 hypothetical protein; hypothetical protein 3351672 5604136 Spro_3043 Serratia proteamaculans 568 hypothetical protein YP_001479272.1 3350899 D 399741 CDS YP_001479273.1 157371284 5604137 complement(3351700..3354399) 1 NC_009832.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ypp:YPDSF_1786 Mg(2+) transport ATPase protein B; magnesium-translocating P-type ATPase 3354399 5604137 Spro_3044 Serratia proteamaculans 568 magnesium-translocating P-type ATPase YP_001479273.1 3351700 R 399741 CDS YP_001479274.1 157371285 5604138 complement(3354598..3355296) 1 NC_009832.1 PFAM: MgtC/SapB transporter; KEGG: yen:YE2586 Mg(2+) transport ATPase protein C; MgtC/SapB transporter 3355296 5604138 Spro_3045 Serratia proteamaculans 568 MgtC/SapB transporter YP_001479274.1 3354598 R 399741 CDS YP_001479275.1 157371286 5604145 3355811..3357994 1 NC_009832.1 KEGG: aha:AHA_0614 hypothetical protein; hypothetical protein 3357994 5604145 Spro_3046 Serratia proteamaculans 568 hypothetical protein YP_001479275.1 3355811 D 399741 CDS YP_001479276.1 157371287 5604146 3358057..3359445 1 NC_009832.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pfo:Pfl_4383 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 3359445 5604146 Spro_3047 Serratia proteamaculans 568 L-carnitine dehydratase/bile acid-inducible protein F YP_001479276.1 3358057 D 399741 CDS YP_001479277.1 157371288 5604147 complement(3359448..3360320) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1863 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 3360320 5604147 Spro_3048 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479277.1 3359448 R 399741 CDS YP_001479278.1 157371289 5604157 3360421..3361836 1 NC_009832.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: sen:SACE_3828 putative amino acid decarboxylase,pyridoxal-dependent protein; pyridoxal-dependent decarboxylase 3361836 5604157 Spro_3049 Serratia proteamaculans 568 pyridoxal-dependent decarboxylase YP_001479278.1 3360421 D 399741 CDS YP_001479279.1 157371290 5604158 3362578..3363207 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: sgl:SG1239 colanic acid capsular biosynthesis activation protein A; LuxR family transcriptional regulator 3363207 5604158 Spro_3050 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001479279.1 3362578 D 399741 CDS YP_001479280.1 157371291 5604159 complement(3363420..3363635) 1 NC_009832.1 KEGG: eca:ECA1682 hypothetical protein; hypothetical protein 3363635 5604159 Spro_3051 Serratia proteamaculans 568 hypothetical protein YP_001479280.1 3363420 R 399741 CDS YP_001479281.1 157371292 5604182 complement(3363980..3364192) 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: yen:YE2590 cold shock-like protein CspC2; cold-shock DNA-binding domain-containing protein 3364192 5604182 Spro_3052 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001479281.1 3363980 R 399741 CDS YP_001479282.1 157371293 5604183 complement(3364477..3365343) 1 NC_009832.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: ent:Ent638_2297 ion transport protein; Ion transport protein 3365343 5604183 Spro_3053 Serratia proteamaculans 568 Ion transport protein YP_001479282.1 3364477 R 399741 CDS YP_001479283.1 157371294 5604184 3365497..3365880 1 NC_009832.1 hypothetical protein 3365880 5604184 Spro_3054 Serratia proteamaculans 568 hypothetical protein YP_001479283.1 3365497 D 399741 CDS YP_001479284.1 157371295 5604220 3366391..3366600 1 NC_009832.1 KEGG: kpn:KPN_00420 hypothetical protein; hypothetical protein 3366600 5604220 Spro_3055 Serratia proteamaculans 568 hypothetical protein YP_001479284.1 3366391 D 399741 CDS YP_001479285.1 157371296 5604221 3366759..3367766 1 NC_009832.1 TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ypi:YpsIP31758_1628 putative NAD(P)H quinone oxidoreductase, PIG3 family; quinone oxidoreductase 3367766 5604221 Spro_3056 Serratia proteamaculans 568 quinone oxidoreductase YP_001479285.1 3366759 D 399741 CDS YP_001479286.1 157371297 5604222 complement(3367807..3368886) 1 NC_009832.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: psa:PST_1930 hypothetical protein; endonuclease/exonuclease/phosphatase 3368886 5604222 Spro_3057 Serratia proteamaculans 568 endonuclease/exonuclease/phosphatase YP_001479286.1 3367807 R 399741 CDS YP_001479287.1 157371298 5604223 complement(3368996..3370048) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro02434 hypothetical protein; NAD-dependent epimerase/dehydratase 3370048 5604223 Spro_3058 Serratia proteamaculans 568 NAD-dependent epimerase/dehydratase YP_001479287.1 3368996 R 399741 CDS YP_001479288.1 157371299 5604224 3370164..3371096 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO3708 putative transcriptional regulatory protein, LysR family; LysR family transcriptional regulator 3371096 5604224 Spro_3059 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479288.1 3370164 D 399741 CDS YP_001479289.1 157371300 5604225 complement(3371100..3371489) 1 NC_009832.1 PFAM: protein of unknown function DUF937; KEGG: bte:BTH_I2206 bacterial protein of unknown function (DUF937) family; hypothetical protein 3371489 5604225 Spro_3060 Serratia proteamaculans 568 hypothetical protein YP_001479289.1 3371100 R 399741 CDS YP_001479290.1 157371301 5604231 complement(3371584..3371832) 1 NC_009832.1 PFAM: Transglycosylase-associated protein; KEGG: ypi:YpsIP31758_2800 hypothetical protein; hypothetical protein 3371832 5604231 Spro_3061 Serratia proteamaculans 568 hypothetical protein YP_001479290.1 3371584 R 399741 CDS YP_001479291.1 157371302 5604232 complement(3372329..3373231) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A5815 transcriptional regulator, LysR family; LysR family transcriptional regulator 3373231 5604232 Spro_3062 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479291.1 3372329 R 399741 CDS YP_001479292.1 157371303 5604233 complement(3373285..3374058) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_L_1000 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3374058 5604233 Spro_3063 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001479292.1 3373285 R 399741 CDS YP_001479293.1 157371304 5604272 3374330..3374746 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: bpd:BURPS668_1165 VOC metalloenzyme family protein; 3-demethylubiquinone-9 3-methyltransferase 3374746 5604272 Spro_3064 Serratia proteamaculans 568 3-demethylubiquinone-9 3-methyltransferase YP_001479293.1 3374330 D 399741 CDS YP_001479294.1 157371305 5604273 complement(3374801..3374995) 1 NC_009832.1 hypothetical protein 3374995 5604273 Spro_3065 Serratia proteamaculans 568 hypothetical protein YP_001479294.1 3374801 R 399741 CDS YP_001479295.1 157371306 5604274 complement(3375170..3376378) 1 NC_009832.1 KEGG: ecs:ECs3276 hypothetical protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB 3376378 5604274 Spro_3066 Serratia proteamaculans 568 IS605 family transposase OrfB YP_001479295.1 3375170 R 399741 CDS YP_001479296.1 157371307 5604301 3376402..3376542 1 NC_009832.1 KEGG: ece:Z5815 putative transposase; putative transposase 3376542 5604301 Spro_3067 Serratia proteamaculans 568 putative transposase YP_001479296.1 3376402 D 399741 CDS YP_001479297.1 157371308 5604302 3376718..3378268 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eca:ECA3148 putative regulator; diguanylate cyclase 3378268 5604302 Spro_3068 Serratia proteamaculans 568 diguanylate cyclase YP_001479297.1 3376718 D 399741 CDS YP_001479298.1 157371309 5604303 3378591..3379487 1 NC_009832.1 KEGG: ypi:YpsIP31758_1624 hypothetical protein; hypothetical protein 3379487 5604303 Spro_3069 Serratia proteamaculans 568 hypothetical protein YP_001479298.1 3378591 D 399741 CDS YP_001479299.1 157371310 5604306 complement(3379484..3380581) 1 NC_009832.1 PFAM: SMC domain protein; KEGG: cvi:CV_1280 hypothetical protein; SMC domain-containing protein 3380581 5604306 Spro_3070 Serratia proteamaculans 568 SMC domain-containing protein YP_001479299.1 3379484 R 399741 CDS YP_001479300.1 157371311 5604307 complement(3380643..3382715) 1 NC_009832.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 3382715 5604307 Spro_3071 Serratia proteamaculans 568 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_001479300.1 3380643 R 399741 CDS YP_001479301.1 157371312 5604308 3383034..3383972 1 NC_009832.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3383972 paaA 5604308 paaA Serratia proteamaculans 568 phenylacetate-CoA oxygenase subunit PaaA YP_001479301.1 3383034 D 399741 CDS YP_001479302.1 157371313 5604318 3383980..3384270 1 NC_009832.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3384270 paaB 5604318 paaB Serratia proteamaculans 568 phenylacetate-CoA oxygenase subunit PaaB YP_001479302.1 3383980 D 399741 CDS YP_001479303.1 157371314 5604319 3384279..3385040 1 NC_009832.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: kpn:KPN_01471 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaI 3385040 5604319 Spro_3074 Serratia proteamaculans 568 phenylacetate-CoA oxygenase subunit PaaI YP_001479303.1 3384279 D 399741 CDS YP_001479304.1 157371315 5604320 3385050..3385547 1 NC_009832.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: eco:b1391 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaJ 3385547 5604320 Spro_3075 Serratia proteamaculans 568 phenylacetate-CoA oxygenase subunit PaaJ YP_001479304.1 3385050 D 399741 CDS YP_001479305.1 157371316 5604327 3385556..3386614 1 NC_009832.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ecj:JW1387 predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation; phenylacetate-CoA oxygenase/reductase subunit PaaK 3386614 5604327 Spro_3076 Serratia proteamaculans 568 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_001479305.1 3385556 D 399741 CDS YP_001479306.1 157371317 5604328 3386624..3387397 1 NC_009832.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ecj:JW1388 enoyl-CoA hydratase-isomerase; enoyl-CoA hydratase-isomerase 3387397 5604328 Spro_3077 Serratia proteamaculans 568 enoyl-CoA hydratase-isomerase YP_001479306.1 3386624 D 399741 CDS YP_001479307.1 157371318 5604329 3387401..3388192 1 NC_009832.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3388192 5604329 Spro_3078 Serratia proteamaculans 568 enoyl-CoA hydratase YP_001479307.1 3387401 D 399741 CDS YP_001479308.1 157371319 5604351 3388195..3389715 1 NC_009832.1 converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxy-acyl-CoA dehydrogenase 3389715 5604351 Spro_3079 Serratia proteamaculans 568 3-hydroxy-acyl-CoA dehydrogenase YP_001479308.1 3388195 D 399741 CDS YP_001479309.1 157371320 5604352 3389712..3390152 1 NC_009832.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: ecj:JW1391 predicted thioesterase; phenylacetic acid degradation protein PaaD 3390152 5604352 Spro_3080 Serratia proteamaculans 568 phenylacetic acid degradation protein PaaD YP_001479309.1 3389712 D 399741 CDS YP_001479310.1 157371321 5604353 3390149..3391354 1 NC_009832.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 3391354 5604353 Spro_3081 Serratia proteamaculans 568 beta-ketoadipyl CoA thiolase YP_001479310.1 3390149 D 399741 CDS YP_001479311.1 157371322 5604357 3391369..3392679 1 NC_009832.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: kpn:KPN_01479 phenylacetate-CoA ligase; phenylacetate-CoA ligase 3392679 5604357 Spro_3082 Serratia proteamaculans 568 phenylacetate-CoA ligase YP_001479311.1 3391369 D 399741 CDS YP_001479312.1 157371323 5604358 3392758..3393696 1 NC_009832.1 TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: ecj:JW1394 DNA-binding transcriptional regulator, aryl-CoA responsive; PaaX family transcriptional regulator 3393696 5604358 Spro_3083 Serratia proteamaculans 568 PaaX family transcriptional regulator YP_001479312.1 3392758 D 399741 CDS YP_001479313.1 157371324 5604359 3393709..3394305 1 NC_009832.1 TIGRFAM: phenylacetic acid degradation protein PaaY; KEGG: ecj:JW1395 predicted hexapeptide repeat acetyltransferase; phenylacetic acid degradation protein PaaY 3394305 5604359 Spro_3084 Serratia proteamaculans 568 phenylacetic acid degradation protein PaaY YP_001479313.1 3393709 D 399741 CDS YP_001479314.1 157371325 5604420 complement(3395932..3396834) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfl:PFL_2405 hypothetical protein; hypothetical protein 3396834 5604420 Spro_3086 Serratia proteamaculans 568 hypothetical protein YP_001479314.1 3395932 R 399741 CDS YP_001479315.1 157371326 5604370 complement(3396929..3398329) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: pfl:PFL_0763 amino acid permease; amino acid permease-associated protein 3398329 5604370 Spro_3087 Serratia proteamaculans 568 amino acid permease-associated protein YP_001479315.1 3396929 R 399741 CDS YP_001479316.1 157371327 5604371 complement(3398346..3399533) 1 NC_009832.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 3399533 5604371 Spro_3088 Serratia proteamaculans 568 aromatic amino acid aminotransferase YP_001479316.1 3398346 R 399741 CDS YP_001479317.1 157371328 5604384 complement(3399593..3399964) 1 NC_009832.1 PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B3155 endoribonuclease L-PSP; endoribonuclease L-PSP 3399964 5604384 Spro_3089 Serratia proteamaculans 568 endoribonuclease L-PSP YP_001479317.1 3399593 R 399741 CDS YP_001479318.1 157371329 5604385 complement(3399968..3400762) 1 NC_009832.1 KEGG: pde:Pden_5100 esterase/lipase-like protein; esterase/lipase-like protein 3400762 5604385 Spro_3090 Serratia proteamaculans 568 esterase/lipase-like protein YP_001479318.1 3399968 R 399741 CDS YP_001479319.1 157371330 5604386 complement(3400918..3401823) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_2626 transcriptional regulator, LysR family; LysR family transcriptional regulator 3401823 5604386 Spro_3091 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479319.1 3400918 R 399741 CDS YP_001479320.1 157371331 5604399 3401922..3402539 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: mag:amb1272 glutathione S-transferase; glutathione S-transferase domain-containing protein 3402539 5604399 Spro_3092 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001479320.1 3401922 D 399741 CDS YP_001479321.1 157371332 5604400 3402545..3403459 1 NC_009832.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mms:mma_2628 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like protein 3403459 5604400 Spro_3093 Serratia proteamaculans 568 pyridoxamine 5'-phosphate oxidase-like protein YP_001479321.1 3402545 D 399741 CDS YP_001479322.1 157371333 5604404 complement(3403590..3403802) 1 NC_009832.1 PFAM: Glycogen synthesis protein; glycogen synthesis protein 3403802 5604404 Spro_3094 Serratia proteamaculans 568 glycogen synthesis protein YP_001479322.1 3403590 R 399741 CDS YP_001479323.1 157371334 5604405 3404020..3405495 1 NC_009832.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: acr:Acry_0274 succinic semialdehyde dehydrogenase; succinic semialdehyde dehydrogenase 3405495 5604405 Spro_3095 Serratia proteamaculans 568 succinic semialdehyde dehydrogenase YP_001479323.1 3404020 D 399741 CDS YP_001479324.1 157371335 5604406 3405556..3405918 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rme:Rmet_1778 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3405918 5604406 Spro_3096 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001479324.1 3405556 D 399741 CDS YP_001479325.1 157371336 5604516 complement(3406002..3407918) 1 NC_009832.1 hypothetical protein 3407918 5604516 Spro_3097 Serratia proteamaculans 568 hypothetical protein YP_001479325.1 3406002 R 399741 CDS YP_001479326.1 157371337 5604517 complement(3408092..3408487) 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: eca:ECA3135 hypothetical protein; cupin 2 domain-containing protein 3408487 5604517 Spro_3098 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001479326.1 3408092 R 399741 CDS YP_001479327.1 157371338 5604518 3408709..3409608 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3724 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 3409608 5604518 Spro_3099 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479327.1 3408709 D 399741 CDS YP_001479328.1 157371339 5604528 3409968..3412343 1 NC_009832.1 PFAM: Pyrrolo-quinoline quinone; KEGG: stm:STM0169 glucose dehydrogenase; quinoprotein glucose dehydrogenase 3412343 5604528 Spro_3100 Serratia proteamaculans 568 quinoprotein glucose dehydrogenase YP_001479328.1 3409968 D 399741 CDS YP_001479329.1 157371340 5604529 3412468..3412848 1 NC_009832.1 hypothetical protein 3412848 5604529 Spro_3101 Serratia proteamaculans 568 hypothetical protein YP_001479329.1 3412468 D 399741 CDS YP_001479330.1 157371341 5604530 complement(3412849..3414105) 1 NC_009832.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); PFAM: proton/sugar symporter LacY; major facilitator superfamily MFS_1; KEGG: eca:ECA1489 lactose permease; major facilitator superfamily oligosaccharide/H+ symporter 3414105 5604530 Spro_3102 Serratia proteamaculans 568 major facilitator superfamily oligosaccharide/H+ symporter YP_001479330.1 3412849 R 399741 CDS YP_001479331.1 157371342 5604553 complement(3414186..3415493) 1 NC_009832.1 PFAM: glycoside hydrolase family 4; KEGG: bha:BH2228 melibiase (alpha-galactosidase); glycoside hydrolase family protein 3415493 5604553 Spro_3103 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001479331.1 3414186 R 399741 CDS YP_001479332.1 157371343 5604554 3415694..3416542 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cbe:Cbei_4446 transcriptional regulator, AraC family; AraC family transcriptional regulator 3416542 5604554 Spro_3104 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479332.1 3415694 D 399741 CDS YP_001479333.1 157371344 5604555 3416862..3417692 1 NC_009832.1 PFAM: chitin-binding domain 3 protein; KEGG: vco:VC0395_1137 putative chitinase; chitin-binding domain-containing protein 3417692 5604555 Spro_3105 Serratia proteamaculans 568 chitin-binding domain-containing protein YP_001479333.1 3416862 D 399741 CDS YP_001479334.1 157371345 5604556 complement(3417742..3419196) 1 NC_009832.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: stm:STM2013 putative transport protein; hypothetical protein 3419196 5604556 Spro_3106 Serratia proteamaculans 568 hypothetical protein YP_001479334.1 3417742 R 399741 CDS YP_001479335.1 157371346 5604557 complement(3419332..3419730) 1 NC_009832.1 KEGG: yen:YE3575 putative secretion protein; putative secretion protein 3419730 5604557 Spro_3107 Serratia proteamaculans 568 putative secretion protein YP_001479335.1 3419332 R 399741 CDS YP_001479336.1 157371347 5604558 complement(3419825..3420511) 1 NC_009832.1 PFAM: isochorismatase hydrolase; KEGG: sbl:Sbal_0487 isochorismatase hydrolase; isochorismatase hydrolase 3420511 5604558 Spro_3108 Serratia proteamaculans 568 isochorismatase hydrolase YP_001479336.1 3419825 R 399741 CDS YP_001479337.1 157371348 5604568 3420676..3421638 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: bxe:Bxe_A0705 transcriptional regulator, AraC family; AraC family transcriptional regulator 3421638 5604568 Spro_3109 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479337.1 3420676 D 399741 CDS YP_001479338.1 157371349 5603892 3421920..3422708 1 NC_009832.1 PFAM: protein of unknown function DUF980; KEGG: yen:YE2610 hypothetical protein; hypothetical protein 3422708 5603892 Spro_3110 Serratia proteamaculans 568 hypothetical protein YP_001479338.1 3421920 D 399741 CDS YP_001479339.1 157371350 5603893 complement(3423037..3423654) 1 NC_009832.1 KEGG: eca:ECA1481 hypothetical protein; hypothetical protein 3423654 5603893 Spro_3111 Serratia proteamaculans 568 hypothetical protein YP_001479339.1 3423037 R 399741 CDS YP_001479340.1 157371351 5604601 3424207..3426186 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: spt:SPA1006 putative hydrolase; beta-lactamase domain-containing protein 3426186 5604601 Spro_3112 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001479340.1 3424207 D 399741 CDS YP_001479341.1 157371352 5604602 3426239..3427030 1 NC_009832.1 KEGG: mms:mma_2406 hypothetical protein; hypothetical protein 3427030 5604602 Spro_3113 Serratia proteamaculans 568 hypothetical protein YP_001479341.1 3426239 D 399741 CDS YP_001479342.1 157371353 5604603 complement(3427199..3428251) 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20366 putative transcriptional regulator protein; LacI family transcription regulator 3428251 5604603 Spro_3114 Serratia proteamaculans 568 LacI family transcription regulator YP_001479342.1 3427199 R 399741 CDS YP_001479343.1 157371354 5604616 3428459..3429487 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: bov:BOV_A0676 ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 3429487 5604616 Spro_3115 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479343.1 3428459 D 399741 CDS YP_001479344.1 157371355 5604617 3429596..3431821 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3844 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3431821 5604617 Spro_3116 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479344.1 3429596 D 399741 CDS YP_001479345.1 157371356 5604618 3431818..3432879 1 NC_009832.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: oan:Oant_3843 ABC transporter related; ABC transporter-like protein 3432879 5604618 Spro_3117 Serratia proteamaculans 568 ABC transporter-like protein YP_001479345.1 3431818 D 399741 CDS YP_001479346.1 157371357 5604651 3432904..3433692 1 NC_009832.1 PFAM: inositol monophosphatase; KEGG: bme:BMEII0568 myo-inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 3433692 5604651 Spro_3118 Serratia proteamaculans 568 inositol-phosphate phosphatase YP_001479346.1 3432904 D 399741 CDS YP_001479347.1 157371358 5604652 complement(3433741..3434751) 1 NC_009832.1 KEGG: kpn:KPN_01710 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3434751 5604652 Spro_3119 Serratia proteamaculans 568 glyceraldehyde-3-phosphate dehydrogenase YP_001479347.1 3433741 R 399741 CDS YP_001479348.1 157371359 5604653 complement(3434831..3435805) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: kpn:KPN_01709 putative helix-turn-helix, AraC type; AraC family transcriptional regulator 3435805 5604653 Spro_3120 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479348.1 3434831 R 399741 CDS YP_001479349.1 157371360 5604678 complement(3435883..3436905) 1 NC_009832.1 PFAM: luciferase family protein; KEGG: eca:ECA3097 monooxygenase; luciferase family protein 3436905 5604678 Spro_3121 Serratia proteamaculans 568 luciferase family protein YP_001479349.1 3435883 R 399741 CDS YP_001479350.1 157371361 5604679 3437242..3437922 1 NC_009832.1 PFAM: TENA/THI-4 domain protein; KEGG: kpn:KPN_01799 putative ABC transporter; TenA family transcription regulator 3437922 5604679 Spro_3122 Serratia proteamaculans 568 TenA family transcription regulator YP_001479350.1 3437242 D 399741 CDS YP_001479351.1 157371362 5604680 3437919..3438674 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_01800 putative ABC transporter; ABC transporter-like protein 3438674 5604680 Spro_3123 Serratia proteamaculans 568 ABC transporter-like protein YP_001479351.1 3437919 D 399741 CDS YP_001479352.1 157371363 5604790 3438671..3439438 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_01801 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 3439438 5604790 Spro_3124 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479352.1 3438671 D 399741 CDS YP_001479353.1 157371364 5604791 3439455..3440390 1 NC_009832.1 PFAM: NLPA lipoprotein; NMT1/THI5 like domain protein; KEGG: hip:CGSHiEE_01225 thiamine biosynthesis protein; NMT1/THI5-like domain-containing protein 3440390 5604791 Spro_3125 Serratia proteamaculans 568 NMT1/THI5-like domain-containing protein YP_001479353.1 3439455 D 399741 CDS YP_001479354.1 157371365 5604792 3440646..3442949 1 NC_009832.1 catalyzes the transfer of phosphoglycerol to the glucan backbone; phosphoglycerol transferase I 3442949 5604792 Spro_3126 Serratia proteamaculans 568 phosphoglycerol transferase I YP_001479354.1 3440646 D 399741 CDS YP_001479355.1 157371366 5604831 3443103..3444563 1 NC_009832.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 3444563 5604831 Spro_3127 Serratia proteamaculans 568 AMP nucleosidase YP_001479355.1 3443103 D 399741 CDS YP_001479356.1 157371367 5604832 3444842..3445759 1 NC_009832.1 PFAM: protein of unknown function UPF0187; KEGG: kpn:KPN_01826 hypothetical protein; hypothetical protein 3445759 5604832 Spro_3128 Serratia proteamaculans 568 hypothetical protein YP_001479356.1 3444842 D 399741 CDS YP_001479357.1 157371368 5604833 complement(3445776..3446699) 1 NC_009832.1 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; nitrogen assimilation transcriptional regulator 3446699 5604833 Spro_3129 Serratia proteamaculans 568 nitrogen assimilation transcriptional regulator YP_001479357.1 3445776 R 399741 CDS YP_001479358.1 157371369 5604846 complement(3446785..3447042) 1 NC_009832.1 hypothetical protein 3447042 5604846 Spro_3130 Serratia proteamaculans 568 hypothetical protein YP_001479358.1 3446785 R 399741 CDS YP_001479359.1 157371370 5607245 3447499..3448428 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psb:Psyr_2945 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 3448428 5607245 Spro_3131 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479359.1 3447499 D 399741 CDS YP_001479360.1 157371371 5604848 3448591..3449760 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO3915 putative transmembrane efflux protein; major facilitator transporter 3449760 5604848 Spro_3132 Serratia proteamaculans 568 major facilitator transporter YP_001479360.1 3448591 D 399741 CDS YP_001479361.1 157371372 5604852 3450060..3450371 1 NC_009832.1 KEGG: ent:Ent638_1881 hypothetical protein; hypothetical protein 3450371 5604852 Spro_3133 Serratia proteamaculans 568 hypothetical protein YP_001479361.1 3450060 D 399741 CDS YP_001479362.1 157371373 5604853 3450741..3451019 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 3451019 5604853 Spro_3134 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001479362.1 3450741 D 399741 CDS YP_001479363.1 157371374 5604854 3451040..3451891 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 3451891 5604854 Spro_3135 Serratia proteamaculans 568 Integrase catalytic subunit YP_001479363.1 3451040 D 399741 CDS YP_001479364.1 157371375 5605038 complement(3451903..3452244) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pau:PA14_49780 probable fosfomycin resistance protein; glutathione transferase 3452244 5605038 Spro_3136 Serratia proteamaculans 568 glutathione transferase YP_001479364.1 3451903 R 399741 CDS YP_001479365.1 157371376 5605039 complement(3452338..3453309) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: plu:plu2641 hypothetical protein; LysR family transcriptional regulator 3453309 5605039 Spro_3137 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479365.1 3452338 R 399741 CDS YP_001479366.1 157371377 5605040 3453445..3454647 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3958 probable transporter; major facilitator transporter 3454647 5605040 Spro_3138 Serratia proteamaculans 568 major facilitator transporter YP_001479366.1 3453445 D 399741 CDS YP_001479367.1 157371378 5605047 complement(3454798..3457887) 1 NC_009832.1 PFAM: acriflavin resistance protein; KEGG: ent:Ent638_1874 acriflavin resistance protein; acriflavin resistance protein 3457887 5605047 Spro_3139 Serratia proteamaculans 568 acriflavin resistance protein YP_001479367.1 3454798 R 399741 CDS YP_001479368.1 157371379 5605048 complement(3457884..3458993) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_1873 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3458993 5605048 Spro_3140 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001479368.1 3457884 R 399741 CDS YP_001479369.1 157371380 5605049 complement(3459069..3459683) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: eca:ECA2931 TetR-family transcriptional regulator; TetR family transcriptional regulator 3459683 5605049 Spro_3141 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001479369.1 3459069 R 399741 CDS YP_001479370.1 157371381 5605081 3460198..3462636 1 NC_009832.1 PFAM: peptidase S45 penicillin amidase; KEGG: swi:Swit_0920 peptidase S45, penicillin amidase; penicillin amidase 3462636 5605081 Spro_3142 Serratia proteamaculans 568 penicillin amidase YP_001479370.1 3460198 D 399741 CDS YP_001479371.1 157371382 5605082 3462869..3463165 1 NC_009832.1 KEGG: mmw:Mmwyl1_1177 hypothetical protein; hypothetical protein 3463165 5605082 Spro_3143 Serratia proteamaculans 568 hypothetical protein YP_001479371.1 3462869 D 399741 CDS YP_001479372.1 157371383 5605083 3463184..3463783 1 NC_009832.1 KEGG: mmw:Mmwyl1_1176 hypothetical protein; hypothetical protein 3463783 5605083 Spro_3144 Serratia proteamaculans 568 hypothetical protein YP_001479372.1 3463184 D 399741 CDS YP_001479373.1 157371384 5605103 complement(3463851..3464138) 1 NC_009832.1 KEGG: eca:ECA0060 hypothetical protein; hypothetical protein 3464138 5605103 Spro_3145 Serratia proteamaculans 568 hypothetical protein YP_001479373.1 3463851 R 399741 CDS YP_001479374.1 157371385 5605104 complement(3464292..3464894) 1 NC_009832.1 PFAM: nitroreductase; KEGG: psp:PSPPH_1550 nitroreductase family protein; nitroreductase 3464894 5605104 Spro_3146 Serratia proteamaculans 568 nitroreductase YP_001479374.1 3464292 R 399741 CDS YP_001479375.1 157371386 5605105 complement(3464967..3465848) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB2390 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 3465848 5605105 Spro_3147 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479375.1 3464967 R 399741 CDS YP_001479376.1 157371387 5605148 3465970..3466605 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: bpe:BP2156 hypothetical protein; NAD(P)H dehydrogenase (quinone) 3466605 5605148 Spro_3148 Serratia proteamaculans 568 NAD(P)H dehydrogenase (quinone) YP_001479376.1 3465970 D 399741 CDS YP_001479377.1 157371388 5605149 3466753..3467853 1 NC_009832.1 PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0372 glycosyl transferase, family 9; glycosyl transferase family protein 3467853 5605149 Spro_3149 Serratia proteamaculans 568 glycosyl transferase family protein YP_001479377.1 3466753 D 399741 CDS YP_001479378.1 157371389 5605150 complement(3467839..3469005) 1 NC_009832.1 PFAM: O-antigen polymerase; KEGG: sgl:SG0240 putative lipid A core surface polymer ligase; O-antigen polymerase 3469005 5605150 Spro_3150 Serratia proteamaculans 568 O-antigen polymerase YP_001479378.1 3467839 R 399741 CDS YP_001479379.1 157371390 5605223 complement(3468983..3469891) 1 NC_009832.1 KEGG: sgl:SG2197 putative lipopolysaccharide glycosyltransferase; putative lipopolysaccharide glycosyltransferase 3469891 5605223 Spro_3151 Serratia proteamaculans 568 putative lipopolysaccharide glycosyltransferase YP_001479379.1 3468983 R 399741 CDS YP_001479380.1 157371391 5605224 complement(3470154..3471272) 1 NC_009832.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: eca:ECA0070 hypothetical protein; peroxidase-like protein 3471272 5605224 Spro_3152 Serratia proteamaculans 568 peroxidase-like protein YP_001479380.1 3470154 R 399741 CDS YP_001479381.1 157371392 5605225 complement(3471269..3472315) 1 NC_009832.1 PFAM: luciferase family protein; KEGG: bbt:BBta_4850 hypothetical protein; luciferase family protein 3472315 5605225 Spro_3153 Serratia proteamaculans 568 luciferase family protein YP_001479381.1 3471269 R 399741 CDS YP_001479382.1 157371393 5605261 complement(3472305..3473978) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA0072 ABC transporter ATP-binding protein; ABC transporter-like protein 3473978 5605261 Spro_3154 Serratia proteamaculans 568 ABC transporter-like protein YP_001479382.1 3472305 R 399741 CDS YP_001479383.1 157371394 5605262 complement(3473975..3474865) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0073 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 3474865 5605262 Spro_3155 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479383.1 3473975 R 399741 CDS YP_001479384.1 157371395 5605263 complement(3474862..3475806) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0074 ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 3475806 5605263 Spro_3156 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479384.1 3474862 R 399741 CDS YP_001479385.1 157371396 5605267 complement(3475817..3477442) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: kpn:KPN_01854 nickel transport protein (ABC superfamily, peri_bind); extracellular solute-binding protein 3477442 5605267 Spro_3157 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479385.1 3475817 R 399741 CDS YP_001479386.1 157371397 5605268 3477618..3477866 1 NC_009832.1 hypothetical protein 3477866 5605268 Spro_3158 Serratia proteamaculans 568 hypothetical protein YP_001479386.1 3477618 D 399741 CDS YP_001479387.1 157371398 5605269 complement(3477884..3478513) 1 NC_009832.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pfo:Pfl_4187 metal-dependent hydrolase; threonyl/alanyl tRNA synthetase SAD 3478513 5605269 Spro_3159 Serratia proteamaculans 568 threonyl/alanyl tRNA synthetase SAD YP_001479387.1 3477884 R 399741 CDS YP_001479388.1 157371399 5605270 3478583..3479533 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_1767 transcriptional regulator, LysR family; LysR family transcriptional regulator 3479533 5605270 Spro_3160 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479388.1 3478583 D 399741 CDS YP_001479389.1 157371400 5605271 complement(3479516..3480163) 1 NC_009832.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: rpa:RPA1722 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 3480163 5605271 Spro_3161 Serratia proteamaculans 568 2OG-Fe(II) oxygenase YP_001479389.1 3479516 R 399741 CDS YP_001479390.1 157371401 5605272 3480304..3481188 1 NC_009832.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: pen:PSEEN3058 chloramphenicol-sensitive protein RarD; transporter DMT superfamily protein 3481188 5605272 Spro_3162 Serratia proteamaculans 568 transporter DMT superfamily protein YP_001479390.1 3480304 D 399741 CDS YP_001479391.1 157371402 5605289 complement(3481223..3481918) 1 NC_009832.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: eca:ECA0474 enterobactin synthetase component D (4'-phosphopantetheinyl transferase); 4'-phosphopantetheinyl transferase 3481918 5605289 Spro_3163 Serratia proteamaculans 568 4'-phosphopantetheinyl transferase YP_001479391.1 3481223 R 399741 CDS YP_001479392.1 157371403 5605290 complement(3482022..3483251) 1 NC_009832.1 PFAM: histidine acid phosphatase; KEGG: ssn:SSON_1012 periplasmic glucose-1-phosphatase; glucose-1-phosphatase/inositol phosphatase 3483251 5605290 Spro_3164 Serratia proteamaculans 568 glucose-1-phosphatase/inositol phosphatase YP_001479392.1 3482022 R 399741 CDS YP_001479393.1 157371404 5605291 complement(3483402..3484865) 1 NC_009832.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: yen:YE2647 citrate carrier; anion transporter 3484865 5605291 Spro_3165 Serratia proteamaculans 568 anion transporter YP_001479393.1 3483402 R 399741 CDS YP_001479394.1 157371405 5605330 complement(3484895..3485779) 1 NC_009832.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: sec:SC0648 putative modifier of citrate lyase protein; triphosphoribosyl-dephospho-CoA synthase 3485779 5605330 Spro_3166 Serratia proteamaculans 568 triphosphoribosyl-dephospho-CoA synthase YP_001479394.1 3484895 R 399741 CDS YP_001479395.1 157371406 5605331 complement(3485757..3486305) 1 NC_009832.1 PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: yen:YE2649 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; Holo-ACP synthase 3486305 5605331 Spro_3167 Serratia proteamaculans 568 Holo-ACP synthase YP_001479395.1 3485757 R 399741 CDS YP_001479396.1 157371407 5605332 complement(3486310..3487815) 1 NC_009832.1 KEGG: yen:YE2650 citrate lyase alpha chain; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; citrate lyase subunit alpha 3487815 5605332 Spro_3168 Serratia proteamaculans 568 citrate lyase subunit alpha YP_001479396.1 3486310 R 399741 CDS YP_001479397.1 157371408 5605421 complement(3487815..3488735) 1 NC_009832.1 KEGG: yen:YE2651 putative citrate lyase beta chain; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 3488735 5605421 Spro_3169 Serratia proteamaculans 568 citrate lyase subunit beta YP_001479397.1 3487815 R 399741 CDS YP_001479398.1 157371409 5605422 complement(3488719..3489027) 1 NC_009832.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 3489027 5605422 Spro_3170 Serratia proteamaculans 568 citrate lyase subunit gamma YP_001479398.1 3488719 R 399741 CDS YP_001479399.1 157371410 5605500 complement(3489024..3490097) 1 NC_009832.1 KEGG: yen:YE2653 [citrate [pro-3s]-lyase] ligase; TIGRFAM: cytidyltransferase-related domain; citrate lyase ligase; PFAM: GCN5-related N-acetyltransferase; Citrate lyase ligase domain protein; citrate lyase ligase 3490097 5605500 Spro_3171 Serratia proteamaculans 568 citrate lyase ligase YP_001479399.1 3489024 R 399741 CDS YP_001479400.1 157371411 5605501 3490437..3491123 1 NC_009832.1 PFAM: response regulator receiver; KEGG: yen:YE2655 response regulator protein; response regulator receiver/unknown domain-containing protein 3491123 5605501 Spro_3172 Serratia proteamaculans 568 response regulator receiver/unknown domain-containing protein YP_001479400.1 3490437 D 399741 CDS YP_001479401.1 157371412 5605502 3491438..3494527 1 NC_009832.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 3494527 lacZ 5605502 lacZ Serratia proteamaculans 568 beta-D-galactosidase YP_001479401.1 3491438 D 399741 CDS YP_001479402.1 157371413 5603106 3495050..3495940 1 NC_009832.1 PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: eca:ECA1579 probable ketopantoate reductase; 2-dehydropantoate 2-reductase 3495940 5603106 Spro_3174 Serratia proteamaculans 568 2-dehydropantoate 2-reductase YP_001479402.1 3495050 D 399741 CDS YP_001479403.1 157371414 5605510 3496224..3497201 1 NC_009832.1 PFAM: Domain of unknown function DUF1852; KEGG: eca:ECA3125 hypothetical protein; hypothetical protein 3497201 5605510 Spro_3175 Serratia proteamaculans 568 hypothetical protein YP_001479403.1 3496224 D 399741 CDS YP_001479404.1 157371415 5605511 3497229..3498260 1 NC_009832.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 3498260 5605511 Spro_3176 Serratia proteamaculans 568 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_001479404.1 3497229 D 399741 CDS YP_001479405.1 157371416 5605560 complement(3498329..3498940) 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ecj:JW0884 conserved hypothetical protein; hypothetical protein 3498940 5605560 Spro_3177 Serratia proteamaculans 568 hypothetical protein YP_001479405.1 3498329 R 399741 CDS YP_001479406.1 157371417 5605561 3499042..3499965 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbo:SBO_2184 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 3499965 5605561 Spro_3178 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479406.1 3499042 D 399741 CDS YP_001479407.1 157371418 5605562 3500271..3501566 1 NC_009832.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_02282 putative permease of the major facilitator superfamily; major facilitator superfamily metabolite/H(+) symporter 3501566 5605562 Spro_3179 Serratia proteamaculans 568 major facilitator superfamily metabolite/H(+) symporter YP_001479407.1 3500271 D 399741 CDS YP_001479408.1 157371419 5605586 3501582..3502388 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: kpn:KPN_02281 molybdate transport protein (ABC superfamily, peri_bind); extracellular solute-binding protein 3502388 5605586 Spro_3180 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479408.1 3501582 D 399741 CDS YP_001479409.1 157371420 5605587 complement(3502363..3503262) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02280 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 3503262 5605587 Spro_3181 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479409.1 3502363 R 399741 CDS YP_001479410.1 157371421 5605588 complement(3503358..3504377) 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ent:Ent638_2281 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 3504377 5605588 Spro_3182 Serratia proteamaculans 568 alcohol dehydrogenase YP_001479410.1 3503358 R 399741 CDS YP_001479411.1 157371422 5605608 complement(3504438..3505220) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ent:Ent638_2278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3505220 5605608 Spro_3183 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001479411.1 3504438 R 399741 CDS YP_001479412.1 157371423 5605609 3505406..3505966 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: ent:Ent638_2276 transcriptional regulator, TetR family; TetR family transcriptional regulator 3505966 5605609 Spro_3184 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001479412.1 3505406 D 399741 CDS YP_001479413.1 157371424 5605654 complement(3507455..3508381) 1 NC_009832.1 this enzyme from Pyrococcus has carbamoyl phosphate synthetase activity even though the enzyme shows sequence and structural similarity to carbamate kinase; this enzyme using carbate and ATP to synthesize carbamoyl phosphate which may be a favorable reaction at the extreme temperatures these organisms live under; carbamate kinase-like carbamoyl phosphate synthetase 3508381 5605654 Spro_3187 Serratia proteamaculans 568 carbamate kinase-like carbamoyl phosphate synthetase YP_001479413.1 3507455 R 399741 CDS YP_001479414.1 157371425 5605655 complement(3508454..3509305) 1 NC_009832.1 PFAM: amidinotransferase; KEGG: ckl:CKL_2196 hypothetical protein; amidinotransferase 3509305 5605655 Spro_3188 Serratia proteamaculans 568 amidinotransferase YP_001479414.1 3508454 R 399741 CDS YP_001479415.1 157371426 5605656 complement(3509401..3510849) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: ctc:CTC00932 putative amino acid permease RocC; amino acid permease-associated protein 3510849 5605656 Spro_3189 Serratia proteamaculans 568 amino acid permease-associated protein YP_001479415.1 3509401 R 399741 CDS YP_001479416.1 157371427 5605672 complement(3510958..3511896) 1 NC_009832.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: pth:PTH_0506 ornithine carbamoyltransferase; ornithine carbamoyltransferase 3511896 5605672 Spro_3190 Serratia proteamaculans 568 ornithine carbamoyltransferase YP_001479416.1 3510958 R 399741 CDS YP_001479417.1 157371428 5605673 complement(3512105..3512998) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2911 transcriptional regulator, LysR family; LysR family transcriptional regulator 3512998 5605673 Spro_3191 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479417.1 3512105 R 399741 CDS YP_001479418.1 157371429 5605674 3513620..3515818 1 NC_009832.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: bch:Bcen2424_0726 catalase/peroxidase HPI; catalase/peroxidase HPI 3515818 5605674 Spro_3192 Serratia proteamaculans 568 catalase/peroxidase HPI YP_001479418.1 3513620 D 399741 CDS YP_001479419.1 157371430 5605715 complement(3515876..3517294) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_01822 putative transport protein; major facilitator transporter 3517294 5605715 Spro_3193 Serratia proteamaculans 568 major facilitator transporter YP_001479419.1 3515876 R 399741 CDS YP_001479420.1 157371431 5605716 complement(3517489..3518748) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2000 major facilitator superfamily MFS_1; sugar efflux transporter 3518748 5605716 Spro_3194 Serratia proteamaculans 568 sugar efflux transporter YP_001479420.1 3517489 R 399741 CDS YP_001479421.1 157371432 5605717 complement(3518840..3519781) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bsu:BG11855 unknown; xylose isomerase domain-containing protein 3519781 5605717 Spro_3195 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001479421.1 3518840 R 399741 CDS YP_001479422.1 157371433 5605740 complement(3519803..3520981) 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bsu:BG12214 hypothetical protein; oxidoreductase domain-containing protein 3520981 5605740 Spro_3196 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001479422.1 3519803 R 399741 CDS YP_001479423.1 157371434 5605741 3521303..3522334 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mlr1005 transcriptional regulator; LacI family transcription regulator 3522334 5605741 Spro_3197 Serratia proteamaculans 568 LacI family transcription regulator YP_001479423.1 3521303 D 399741 CDS YP_001479424.1 157371435 5605742 3522382..3523068 1 NC_009832.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: bch:Bcen2424_5163 aspartyl/asparaginyl beta-hydroxylase; aspartyl/asparaginyl beta-hydroxylase 3523068 5605742 Spro_3198 Serratia proteamaculans 568 aspartyl/asparaginyl beta-hydroxylase YP_001479424.1 3522382 D 399741 CDS YP_001479425.1 157371436 5605982 complement(3523065..3523769) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2495 ABC transporter related; ABC transporter-like protein 3523769 5605982 Spro_3199 Serratia proteamaculans 568 ABC transporter-like protein YP_001479425.1 3523065 R 399741 CDS YP_001479426.1 157371437 5605983 complement(3523778..3524653) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ent:Ent638_2494 ABC transporter related; ABC transporter-like protein 3524653 5605983 Spro_3200 Serratia proteamaculans 568 ABC transporter-like protein YP_001479426.1 3523778 R 399741 CDS YP_001479427.1 157371438 5605984 complement(3524650..3525936) 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2493 inner-membrane translocator; inner-membrane translocator 3525936 5605984 Spro_3201 Serratia proteamaculans 568 inner-membrane translocator YP_001479427.1 3524650 R 399741 CDS YP_001479428.1 157371439 5605991 complement(3525947..3526963) 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: ent:Ent638_2492 inner-membrane translocator; inner-membrane translocator 3526963 5605991 Spro_3202 Serratia proteamaculans 568 inner-membrane translocator YP_001479428.1 3525947 R 399741 CDS YP_001479429.1 157371440 5605992 complement(3527012..3528130) 1 NC_009832.1 PFAM: Extracellular ligand-binding receptor; KEGG: ent:Ent638_2491 extracellular ligand-binding receptor; extracellular ligand-binding receptor 3528130 5605992 Spro_3203 Serratia proteamaculans 568 extracellular ligand-binding receptor YP_001479429.1 3527012 R 399741 CDS YP_001479430.1 157371441 5603460 3528815..3530557 1 NC_009832.1 KEGG: eca:ECA1632 hypothetical protein; hypothetical protein 3530557 5603460 Spro_3204 Serratia proteamaculans 568 hypothetical protein YP_001479430.1 3528815 D 399741 CDS YP_001479431.1 157371442 5605998 complement(3530730..3531683) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA2921 probable transcriptional regulator; LysR family transcriptional regulator 3531683 5605998 Spro_3205 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479431.1 3530730 R 399741 CDS YP_001479432.1 157371443 5605999 3531823..3532992 1 NC_009832.1 KEGG: pau:PA14_26260 putative hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3532992 5605999 Spro_3206 Serratia proteamaculans 568 amidohydrolase YP_001479432.1 3531823 D 399741 CDS YP_001479433.1 157371444 5606000 3533029..3533820 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B2597 ABC amino acid transporter, periplasmic ligand binding protein; extracellular solute-binding protein 3533820 5606000 Spro_3207 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479433.1 3533029 D 399741 CDS YP_001479434.1 157371445 5606007 complement(3533868..3534185) 1 NC_009832.1 PFAM: protein of unknown function DUF496; KEGG: ypi:YpsIP31758_2417 hypothetical protein; hypothetical protein 3534185 5606007 Spro_3208 Serratia proteamaculans 568 hypothetical protein YP_001479434.1 3533868 R 399741 CDS YP_001479435.1 157371446 5606008 complement(3534347..3535414) 1 NC_009832.1 KEGG: yen:YE2756 hypothetical protein; hypothetical protein 3535414 5606008 Spro_3209 Serratia proteamaculans 568 hypothetical protein YP_001479435.1 3534347 R 399741 CDS YP_001479436.1 157371447 5606009 complement(3535513..3536280) 1 NC_009832.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: ypi:YpsIP31758_1649 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 3536280 5606009 Spro_3210 Serratia proteamaculans 568 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_001479436.1 3535513 R 399741 CDS YP_001479437.1 157371448 5606148 3536484..3537230 1 NC_009832.1 PFAM: peptidase S24 and S26 domain protein; KEGG: sgl:SG1826 putative transcriptional regulator; putative phage repressor 3537230 5606148 Spro_3211 Serratia proteamaculans 568 putative phage repressor YP_001479437.1 3536484 D 399741 CDS YP_001479438.1 157371449 5606149 complement(3537273..3538397) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: kpn:KPN_03122 hemolysin F; hypothetical protein 3538397 5606149 Spro_3212 Serratia proteamaculans 568 hypothetical protein YP_001479438.1 3537273 R 399741 CDS YP_001479439.1 157371450 5606150 3538926..3539117 1 NC_009832.1 hypothetical protein 3539117 5606150 Spro_3213 Serratia proteamaculans 568 hypothetical protein YP_001479439.1 3538926 D 399741 CDS YP_001479440.1 157371451 5606186 3539217..3540644 1 NC_009832.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 3540644 sbcB 5606186 sbcB Serratia proteamaculans 568 exonuclease I YP_001479440.1 3539217 D 399741 CDS YP_001479441.1 157371452 5606187 complement(3540700..3542067) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA2566 putative amino acid permease; amino acid permease-associated protein 3542067 5606187 Spro_3215 Serratia proteamaculans 568 amino acid permease-associated protein YP_001479441.1 3540700 R 399741 CDS YP_001479442.1 157371453 5606188 complement(3542601..3544019) 1 NC_009832.1 PFAM: glutamine synthetase catalytic region; KEGG: ecj:JW5201 gamma-Glu-putrescine synthase; glutamine synthetase catalytic region 3544019 5606188 Spro_3216 Serratia proteamaculans 568 glutamine synthetase catalytic region YP_001479442.1 3542601 R 399741 CDS YP_001479443.1 157371454 5606240 3544414..3544971 1 NC_009832.1 regulates genes involved in putrescine degradation; DNA-binding transcriptional repressor PuuR 3544971 5606240 Spro_3217 Serratia proteamaculans 568 DNA-binding transcriptional repressor PuuR YP_001479443.1 3544414 D 399741 CDS YP_001479444.1 157371455 5606241 3545179..3546690 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE2762 putative ABC transport system ATP-binding protein; ABC transporter-like protein 3546690 5606241 Spro_3218 Serratia proteamaculans 568 ABC transporter-like protein YP_001479444.1 3545179 D 399741 CDS YP_001479445.1 157371456 5606242 3546687..3547682 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: yen:YE2763 ribose transport system, permease protein; monosaccharide-transporting ATPase 3547682 5606242 Spro_3219 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001479445.1 3546687 D 399741 CDS YP_001479446.1 157371457 5606258 3547944..3549941 1 NC_009832.1 YiuR; outer membrane siderophore receptor; putative outer membrane receptor 3549941 5606258 Spro_3220 Serratia proteamaculans 568 putative outer membrane receptor YP_001479446.1 3547944 D 399741 CDS YP_001479447.1 157371458 5606259 complement(3550123..3550911) 1 NC_009832.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1460 putative siderophore ABC transporter, ATP-binding subunit; ABC transporter-like protein 3550911 5606259 Spro_3221 Serratia proteamaculans 568 ABC transporter-like protein YP_001479447.1 3550123 R 399741 CDS YP_001479448.1 157371459 5606260 complement(3550908..3551990) 1 NC_009832.1 PFAM: transport system permease protein; KEGG: ypi:YpsIP31758_2668 ABC transporter, iron chelate uptake transporter (FeCT) family, permease protein; transport system permease 3551990 5606260 Spro_3222 Serratia proteamaculans 568 transport system permease YP_001479448.1 3550908 R 399741 CDS YP_001479449.1 157371460 5606264 3552349..3553446 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpa:RPA3076 putative diguanylate cyclase (GGDEF); diguanylate cyclase 3553446 5606264 Spro_3223 Serratia proteamaculans 568 diguanylate cyclase YP_001479449.1 3552349 D 399741 CDS YP_001479450.1 157371461 5606265 complement(3553506..3554987) 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: ypi:YpsIP31758_2670 lysine-specific permease LysP; lysine transporter 3554987 5606265 Spro_3224 Serratia proteamaculans 568 lysine transporter YP_001479450.1 3553506 R 399741 CDS YP_001479451.1 157371462 5606266 complement(3555185..3556060) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1457 putative LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 3556060 5606266 Spro_3225 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001479451.1 3555185 R 399741 CDS YP_001479452.1 157371463 5606283 3556310..3557398 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_2674 hypothetical protein; hypothetical protein 3557398 5606283 Spro_3226 Serratia proteamaculans 568 hypothetical protein YP_001479452.1 3556310 D 399741 CDS YP_001479453.1 157371464 5606284 3557516..3558355 1 NC_009832.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 3558355 5606284 Spro_3227 Serratia proteamaculans 568 endonuclease IV YP_001479453.1 3557516 D 399741 CDS YP_001479454.1 157371465 5606285 complement(3558602..3560287) 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunits IIBC 3560287 5606285 Spro_3228 Serratia proteamaculans 568 PTS system fructose-specific transporter subunits IIBC YP_001479454.1 3558602 R 399741 CDS YP_001479455.1 157371466 5606316 complement(3560299..3561240) 1 NC_009832.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 3561240 fruK 5606316 fruK Serratia proteamaculans 568 1-phosphofructokinase YP_001479455.1 3560299 R 399741 CDS YP_001479456.1 157371467 5606317 complement(3561237..3562370) 1 NC_009832.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 3562370 5606317 Spro_3230 Serratia proteamaculans 568 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_001479456.1 3561237 R 399741 CDS YP_001479457.1 157371468 5606318 3562618..3563040 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: yen:YE1446 putative Mut family protein; NUDIX hydrolase 3563040 5606318 Spro_3231 Serratia proteamaculans 568 NUDIX hydrolase YP_001479457.1 3562618 D 399741 CDS YP_001479458.1 157371469 5606355 3563298..3564458 1 NC_009832.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: yen:YE1445 cytochrome c-type protein; NapC/NirT cytochrome c domain-containing protein 3564458 5606355 Spro_3232 Serratia proteamaculans 568 NapC/NirT cytochrome c domain-containing protein YP_001479458.1 3563298 D 399741 CDS YP_001479459.1 157371470 5606356 3564471..3566951 1 NC_009832.1 KEGG: yen:YE1444 putative molybdopterin-containing oxidoreductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 3566951 5606356 Spro_3233 Serratia proteamaculans 568 molybdopterin guanine dinucleotide-containing S/N-oxide reductase YP_001479459.1 3564471 D 399741 CDS YP_001479460.1 157371471 5606357 3567077..3568306 1 NC_009832.1 TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA2730 sugar efflux transporter; sugar efflux transporter 3568306 5606357 Spro_3234 Serratia proteamaculans 568 sugar efflux transporter YP_001479460.1 3567077 D 399741 CDS YP_001479461.1 157371472 5606360 complement(3568314..3568568) 1 NC_009832.1 PFAM: protein of unknown function UPF0153; KEGG: ypi:YpsIP31758_2696 hypothetical protein; hypothetical protein 3568568 5606360 Spro_3235 Serratia proteamaculans 568 hypothetical protein YP_001479461.1 3568314 R 399741 CDS YP_001479462.1 157371473 5606361 3568852..3570096 1 NC_009832.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: yen:YE1442 putative tryptophan-specific transport protein; aromatic amino acid transporter 3570096 5606361 Spro_3236 Serratia proteamaculans 568 aromatic amino acid transporter YP_001479462.1 3568852 D 399741 CDS YP_001479463.1 157371474 5606362 3570225..3570797 1 NC_009832.1 TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW domain protein; Elongation factor P; KEGG: ypi:YpsIP31758_2698 elongation factor P-like protein; elongation factor P-like protein YeiP 3570797 5606362 Spro_3237 Serratia proteamaculans 568 elongation factor P-like protein YeiP YP_001479463.1 3570225 D 399741 CDS YP_001479464.1 157371475 5606369 complement(3570978..3572168) 1 NC_009832.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 3572168 5606369 Spro_3238 Serratia proteamaculans 568 mannonate dehydratase YP_001479464.1 3570978 R 399741 CDS YP_001479465.1 157371476 5606370 3572506..3573987 1 NC_009832.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: yen:YE1438 putative D-mannonate oxidoreductase; mannitol dehydrogenase domain-containing protein 3573987 5606370 Spro_3239 Serratia proteamaculans 568 mannitol dehydrogenase domain-containing protein YP_001479465.1 3572506 D 399741 CDS YP_001479466.1 157371477 5606371 complement(3574066..3574338) 1 NC_009832.1 KEGG: yen:YE1436 hypothetical protein; hypothetical protein 3574338 5606371 Spro_3240 Serratia proteamaculans 568 hypothetical protein YP_001479466.1 3574066 R 399741 CDS YP_001479467.1 157371478 5606409 3574691..3575665 1 NC_009832.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ypp:YPDSF_2417 cobalamin synthesis protein; cobalamin synthesis protein P47K 3575665 5606409 Spro_3241 Serratia proteamaculans 568 cobalamin synthesis protein P47K YP_001479467.1 3574691 D 399741 CDS YP_001479468.1 157371479 5606410 3575717..3576421 1 NC_009832.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: yen:YE1434 hypothetical protein; PA-phosphatase-like phosphoesterase 3576421 5606410 Spro_3242 Serratia proteamaculans 568 PA-phosphatase-like phosphoesterase YP_001479468.1 3575717 D 399741 CDS YP_001479469.1 157371480 5606411 complement(3576586..3576834) 1 NC_009832.1 hypothetical protein 3576834 5606411 Spro_3243 Serratia proteamaculans 568 hypothetical protein YP_001479469.1 3576586 R 399741 CDS YP_001479470.1 157371481 5606517 3576834..3577409 1 NC_009832.1 by similarity, Spr seems to have peptidase activity; involved in thermoresistance; putative outer membrane lipoprotein 3577409 spr 5606517 spr Serratia proteamaculans 568 putative outer membrane lipoprotein YP_001479470.1 3576834 D 399741 CDS YP_001479471.1 157371482 5606518 3577758..3579344 1 NC_009832.1 PFAM: EAL domain protein; KEGG: ypi:YpsIP31758_2710 protein rtn; hypothetical protein 3579344 5606518 Spro_3245 Serratia proteamaculans 568 hypothetical protein YP_001479471.1 3577758 D 399741 CDS YP_001479472.1 157371483 5606519 3579434..3581242 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: yen:YE1430 putative substrate-binding transport protein; extracellular solute-binding protein 3581242 5606519 Spro_3246 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479472.1 3579434 D 399741 CDS YP_001479473.1 157371484 5606572 3581253..3582347 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1429 putative ABC transporter integral membrane subunit; binding-protein-dependent transport systems inner membrane component 3582347 5606572 Spro_3247 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479473.1 3581253 D 399741 CDS YP_001479474.1 157371485 5606573 3582344..3583369 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_2713 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 3583369 5606573 Spro_3248 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479474.1 3582344 D 399741 CDS YP_001479475.1 157371486 5606588 3583371..3584963 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_2714 ABC transporter, ATP-binding protein; ABC transporter-like protein 3584963 5606588 Spro_3249 Serratia proteamaculans 568 ABC transporter-like protein YP_001479475.1 3583371 D 399741 CDS YP_001479476.1 157371487 5606589 complement(3584973..3585317) 1 NC_009832.1 KEGG: eca:ECA2740 hypothetical protein; hypothetical protein 3585317 5606589 Spro_3250 Serratia proteamaculans 568 hypothetical protein YP_001479476.1 3584973 R 399741 CDS YP_001479477.1 157371488 5606590 complement(3585925..3587133) 1 NC_009832.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system 3587133 5606590 Spro_3251 Serratia proteamaculans 568 bicyclomycin/multidrug efflux system YP_001479477.1 3585925 R 399741 CDS YP_001479478.1 157371489 5606717 complement(3587173..3587886) 1 NC_009832.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 3587886 5606717 Spro_3252 Serratia proteamaculans 568 16S rRNA pseudouridylate synthase A YP_001479478.1 3587173 R 399741 CDS YP_001479479.1 157371490 5606718 3588196..3589953 1 NC_009832.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: yen:YE1423 putative DEAD box helicase family protein; type III restriction protein res subunit 3589953 5606718 Spro_3253 Serratia proteamaculans 568 type III restriction protein res subunit YP_001479479.1 3588196 D 399741 CDS YP_001479480.1 157371491 5606719 3590160..3590444 1 NC_009832.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 3590444 5606719 Spro_3254 Serratia proteamaculans 568 50S ribosomal protein L25 YP_001479480.1 3590160 D 399741 CDS YP_001479481.1 157371492 5606752 complement(3590529..3591539) 1 NC_009832.1 PFAM: 37kDa nucleoid-associated protein; KEGG: eca:ECA2747 nucleoid-associated protein; nucleoid-associated protein NdpA 3591539 5606752 Spro_3255 Serratia proteamaculans 568 nucleoid-associated protein NdpA YP_001479481.1 3590529 R 399741 CDS YP_001479482.1 157371493 5606753 3591800..3592060 1 NC_009832.1 PFAM: protein of unknown function DUF1414; KEGG: ypm:YP_0880 hypothetical protein; hypothetical protein 3592060 5606753 Spro_3256 Serratia proteamaculans 568 hypothetical protein YP_001479482.1 3591800 D 399741 CDS YP_001479483.1 157371494 5606754 3592070..3593851 1 NC_009832.1 PFAM: sulfatase; KEGG: yen:YE1419 hypothetical protein; sulfatase 3593851 5606754 Spro_3257 Serratia proteamaculans 568 sulfatase YP_001479483.1 3592070 D 399741 CDS YP_001479484.1 157371495 5603664 complement(3594991..3595320) 1 NC_009832.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 3595320 5603664 Spro_3258 Serratia proteamaculans 568 DNA-binding transcriptional activator OsmE YP_001479484.1 3594991 R 399741 CDS YP_001479485.1 157371496 5606784 complement(3595455..3596351) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: sec:SC3660 putative Zn-dependent hydrolase, including glyoxylases; beta-lactamase 3596351 5606784 Spro_3259 Serratia proteamaculans 568 beta-lactamase YP_001479485.1 3595455 R 399741 CDS YP_001479486.1 157371497 5606785 3596431..3597333 1 NC_009832.1 PFAM: regulatory protein LysR; KEGG: stm:STM3736 putative transcriptional regulator; LysR family transcriptional regulator 3597333 5606785 Spro_3260 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479486.1 3596431 D 399741 CDS YP_001479487.1 157371498 5606836 complement(3597340..3597807) 1 NC_009832.1 PFAM: protein of unknown function DUF1348; KEGG: ypi:YpsIP31758_2759 hypothetical protein; hypothetical protein 3597807 5606836 Spro_3261 Serratia proteamaculans 568 hypothetical protein YP_001479487.1 3597340 R 399741 CDS YP_001479488.1 157371499 5606837 3597923..3598501 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: ypi:YpsIP31758_2760 transcriptional regulator, TetR family; TetR family transcriptional regulator 3598501 5606837 Spro_3262 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001479488.1 3597923 D 399741 CDS YP_001479489.1 157371500 5606838 complement(3598495..3598911) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpa:RPA2469 putative lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 3598911 5606838 Spro_3263 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001479489.1 3598495 R 399741 CDS YP_001479490.1 157371501 5606846 complement(3599191..3600303) 1 NC_009832.1 allows for ions and hydrophilic solutes to cross the outer membrane; outer membrane porin protein C 3600303 5606846 Spro_3264 Serratia proteamaculans 568 outer membrane porin protein C YP_001479490.1 3599191 R 399741 CDS YP_001479491.1 157371502 5606847 3601135..3602289 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1399 hypothetical protein; major facilitator transporter 3602289 5606847 Spro_3265 Serratia proteamaculans 568 major facilitator transporter YP_001479491.1 3601135 D 399741 CDS YP_001479492.1 157371503 5606848 3602311..3605013 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: yen:YE1398 putative two component sensor kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 3605013 5606848 Spro_3266 Serratia proteamaculans 568 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_001479492.1 3602311 D 399741 CDS YP_001479493.1 157371504 5606855 3605006..3605656 1 NC_009832.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 3605656 5606855 Spro_3267 Serratia proteamaculans 568 transcriptional regulator RcsB YP_001479493.1 3605006 D 399741 CDS YP_001479494.1 157371505 5606856 complement(3605708..3608581) 1 NC_009832.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: yps:YPTB1257 two component sensor kinase/response regulator protein RcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 3608581 5606856 Spro_3268 Serratia proteamaculans 568 hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_001479494.1 3605708 R 399741 CDS YP_001479495.1 157371506 5606857 complement(3608745..3611393) 1 NC_009832.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 3611393 5606857 Spro_3269 Serratia proteamaculans 568 DNA gyrase subunit A YP_001479495.1 3608745 R 399741 CDS YP_001479496.1 157371507 5606908 3611606..3612331 1 NC_009832.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 3612331 5606908 Spro_3270 Serratia proteamaculans 568 3-demethylubiquinone-9 3-methyltransferase YP_001479496.1 3611606 D 399741 CDS YP_001479497.1 157371508 5606909 3612769..3615057 1 NC_009832.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3615057 5606909 Spro_3271 Serratia proteamaculans 568 ribonucleotide-diphosphate reductase subunit alpha YP_001479497.1 3612769 D 399741 CDS YP_001479498.1 157371509 5606910 3615128..3616258 1 NC_009832.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 3616258 nrdB 5606910 nrdB Serratia proteamaculans 568 ribonucleotide-diphosphate reductase subunit beta YP_001479498.1 3615128 D 399741 CDS YP_001479499.1 157371510 5606934 3616262..3616522 1 NC_009832.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin YfaE 3616522 5606934 Spro_3273 Serratia proteamaculans 568 2Fe-2S ferredoxin YfaE YP_001479499.1 3616262 D 399741 CDS YP_001479500.1 157371511 5606935 complement(3616583..3616735) 1 NC_009832.1 PFAM: Hok/gef cell toxic protein; KEGG: kpn:KPN_03921 putative hok/gef cell toxic protein; Hok/gef cell toxic protein 3616735 5606935 Spro_3274 Serratia proteamaculans 568 Hok/gef cell toxic protein YP_001479500.1 3616583 R 399741 CDS YP_001479501.1 157371512 5606936 complement(3616963..3618159) 1 NC_009832.1 TIGRFAM: molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: yen:YE1383 hypothetical protein; competence damage-inducible protein A 3618159 5606936 Spro_3275 Serratia proteamaculans 568 competence damage-inducible protein A YP_001479501.1 3616963 R 399741 CDS YP_001479502.1 157371513 5607041 3618404..3619612 1 NC_009832.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: ypi:YpsIP31758_2774 tyrosine-specific transport protein; aromatic amino acid transporter 3619612 5607041 Spro_3276 Serratia proteamaculans 568 aromatic amino acid transporter YP_001479502.1 3618404 D 399741 CDS YP_001479503.1 157371514 5607042 complement(3619663..3620205) 1 NC_009832.1 PFAM: YfaZ family protein; KEGG: ypi:YpsIP31758_2775 putative outer membrane protein; YfaZ family protein 3620205 5607042 Spro_3277 Serratia proteamaculans 568 YfaZ family protein YP_001479503.1 3619663 R 399741 CDS YP_001479504.1 157371515 5607043 3620533..3621969 1 NC_009832.1 PFAM: Catalase domain protein; KEGG: yen:YE1380 catalase; catalase 3621969 5607043 Spro_3278 Serratia proteamaculans 568 catalase YP_001479504.1 3620533 D 399741 CDS YP_001479505.1 157371516 5607071 complement(3622008..3623393) 1 NC_009832.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: yps:YPTB2556 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoic acid--CoA ligase 3623393 5607071 Spro_3279 Serratia proteamaculans 568 O-succinylbenzoic acid--CoA ligase YP_001479505.1 3622008 R 399741 CDS YP_001479506.1 157371517 5607072 complement(3623381..3624364) 1 NC_009832.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 3624364 5607072 Spro_3280 Serratia proteamaculans 568 O-succinylbenzoate synthase YP_001479506.1 3623381 R 399741 CDS YP_001479507.1 157371518 5607073 complement(3624364..3625221) 1 NC_009832.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 3625221 5607073 Spro_3281 Serratia proteamaculans 568 naphthoate synthase YP_001479507.1 3624364 R 399741 CDS YP_001479508.1 157371519 5607102 complement(3625233..3626000) 1 NC_009832.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 3626000 5607102 Spro_3282 Serratia proteamaculans 568 acyl-CoA thioester hydrolase YfbB YP_001479508.1 3625233 R 399741 CDS YP_001479509.1 157371520 5607103 complement(3626000..3627673) 1 NC_009832.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 3627673 5607103 Spro_3283 Serratia proteamaculans 568 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_001479509.1 3626000 R 399741 CDS YP_001479510.1 157371521 5607104 complement(3627926..3629224) 1 NC_009832.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: yps:YPTB2561 menaquinone-specific isochorismate synthase; isochorismate synthase 3629224 5607104 Spro_3284 Serratia proteamaculans 568 isochorismate synthase YP_001479510.1 3627926 R 399741 CDS YP_001479511.1 157371522 5607186 3629505..3638147 1 NC_009832.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: ent:Ent638_4245 glycosyltransferase 36; glycosyltransferase 36 3638147 5607186 Spro_3285 Serratia proteamaculans 568 glycosyltransferase 36 YP_001479511.1 3629505 D 399741 CDS YP_001479512.1 157371523 5607187 complement(3638190..3638501) 1 NC_009832.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: sfv:SFV_2337 hypothetical protein; hypothetical protein 3638501 5607187 Spro_3286 Serratia proteamaculans 568 hypothetical protein YP_001479512.1 3638190 R 399741 CDS YP_001479513.1 157371524 5607188 complement(3638587..3639621) 1 NC_009832.1 NAD-binding; L-idonate 5-dehydrogenase 3639621 5607188 Spro_3287 Serratia proteamaculans 568 L-idonate 5-dehydrogenase YP_001479513.1 3638587 R 399741 CDS YP_001479514.1 157371525 5607201 complement(3639642..3640406) 1 NC_009832.1 Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase 3640406 5607201 Spro_3288 Serratia proteamaculans 568 gluconate 5-dehydrogenase YP_001479514.1 3639642 R 399741 CDS YP_001479515.1 157371526 5607202 3640677..3641660 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE1364 putative LacI-family transcriptional regulatory protein; LacI family transcription regulator 3641660 5607202 Spro_3289 Serratia proteamaculans 568 LacI family transcription regulator YP_001479515.1 3640677 D 399741 CDS YP_001479516.1 157371527 5607203 complement(3641662..3642156) 1 NC_009832.1 PFAM: protein of unknown function DUF1097; KEGG: yen:YE1358 hypothetical protein; hypothetical protein 3642156 5607203 Spro_3290 Serratia proteamaculans 568 hypothetical protein YP_001479516.1 3641662 R 399741 CDS YP_001479517.1 157371528 5607292 complement(3642417..3643661) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: asa:ASA_3608 multi-drug efflux transporter; major facilitator transporter 3643661 5607292 Spro_3291 Serratia proteamaculans 568 major facilitator transporter YP_001479517.1 3642417 R 399741 CDS YP_001479518.1 157371529 5607293 complement(3643810..3644673) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: reu:Reut_A0878 probable transmembrane protein; hypothetical protein 3644673 5607293 Spro_3292 Serratia proteamaculans 568 hypothetical protein YP_001479518.1 3643810 R 399741 CDS YP_001479519.1 157371530 5607294 complement(3644774..3645199) 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: psp:PSPPH_4848 hypothetical protein; cupin 2 domain-containing protein 3645199 5607294 Spro_3293 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001479519.1 3644774 R 399741 CDS YP_001479520.1 157371531 5607322 complement(3645290..3647119) 1 NC_009832.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: stp:Strop_3951 thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 3647119 5607322 Spro_3294 Serratia proteamaculans 568 thiamine pyrophosphate binding domain-containing protein YP_001479520.1 3645290 R 399741 CDS YP_001479521.1 157371532 5607323 3647456..3648331 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aha:AHA_0743 regulatory protein, LysR:LysR, substrate-binding; LysR family transcriptional regulator 3648331 5607323 Spro_3295 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479521.1 3647456 D 399741 CDS YP_001479522.1 157371533 5607324 complement(3648411..3649868) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 3649868 5607324 Spro_3296 Serratia proteamaculans 568 NADH dehydrogenase subunit N YP_001479522.1 3648411 R 399741 CDS YP_001479523.1 157371534 5607404 complement(3649875..3651404) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 3651404 5607404 Spro_3297 Serratia proteamaculans 568 NADH dehydrogenase subunit M YP_001479523.1 3649875 R 399741 CDS YP_001479524.1 157371535 5607405 complement(3651505..3653352) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 3653352 5607405 Spro_3298 Serratia proteamaculans 568 NADH dehydrogenase subunit L YP_001479524.1 3651505 R 399741 CDS YP_001479525.1 157371536 5607406 complement(3653349..3653651) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 3653651 5607406 Spro_3299 Serratia proteamaculans 568 NADH dehydrogenase subunit K YP_001479525.1 3653349 R 399741 CDS YP_001479526.1 157371537 5603379 complement(3653648..3654208) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 3654208 5603379 Spro_3300 Serratia proteamaculans 568 NADH dehydrogenase subunit J YP_001479526.1 3653648 R 399741 CDS YP_001479527.1 157371538 5603380 complement(3654222..3654764) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3654764 5603380 Spro_3301 Serratia proteamaculans 568 NADH dehydrogenase subunit I YP_001479527.1 3654222 R 399741 CDS YP_001479528.1 157371539 5603381 complement(3654779..3655756) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3655756 5603381 Spro_3302 Serratia proteamaculans 568 NADH dehydrogenase subunit H YP_001479528.1 3654779 R 399741 CDS YP_001479529.1 157371540 5603343 complement(3655753..3658500) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3658500 5603343 Spro_3303 Serratia proteamaculans 568 NADH dehydrogenase subunit G YP_001479529.1 3655753 R 399741 CDS YP_001479530.1 157371541 5603344 complement(3658571..3659923) 1 NC_009832.1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3659923 5603344 Spro_3304 Serratia proteamaculans 568 NADH dehydrogenase I subunit F YP_001479530.1 3658571 R 399741 CDS YP_001479531.1 157371542 5603345 complement(3659920..3660471) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 3660471 5603345 Spro_3305 Serratia proteamaculans 568 NADH dehydrogenase subunit E YP_001479531.1 3659920 R 399741 CDS YP_001479532.1 157371543 5603331 complement(3660474..3662270) 1 NC_009832.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 3662270 5603331 Spro_3306 Serratia proteamaculans 568 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_001479532.1 3660474 R 399741 CDS YP_001479533.1 157371544 5603332 complement(3662366..3663040) 1 NC_009832.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3663040 5603332 Spro_3307 Serratia proteamaculans 568 NADH dehydrogenase subunit B YP_001479533.1 3662366 R 399741 CDS YP_001479534.1 157371545 5603333 complement(3663064..3663504) 1 NC_009832.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 3663504 5603333 Spro_3308 Serratia proteamaculans 568 NADH dehydrogenase subunit A YP_001479534.1 3663064 R 399741 CDS YP_001479535.1 157371546 5603293 complement(3664217..3665152) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yps:YPTB2588 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 3665152 5603293 Spro_3309 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479535.1 3664217 R 399741 CDS YP_001479536.1 157371547 5603294 3666016..3667230 1 NC_009832.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 3667230 5603294 Spro_3310 Serratia proteamaculans 568 aminotransferase AlaT YP_001479536.1 3666016 D 399741 CDS YP_001479537.1 157371548 5603295 3667321..3667956 1 NC_009832.1 KEGG: yen:YE1340 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein 3667956 5603295 Spro_3311 Serratia proteamaculans 568 hypothetical protein YP_001479537.1 3667321 D 399741 CDS YP_001479538.1 157371549 5603237 complement(3667987..3669819) 1 NC_009832.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: yps:YPTB2592 probable sodium:sulfate symporter; citrate transporter 3669819 5603237 Spro_3312 Serratia proteamaculans 568 citrate transporter YP_001479538.1 3667987 R 399741 CDS YP_001479539.1 157371550 5603238 complement(3669918..3670574) 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE1337 putative haloacid dehalogenase-like hydrolase; putative phosphatase 3670574 5603238 Spro_3313 Serratia proteamaculans 568 putative phosphatase YP_001479539.1 3669918 R 399741 CDS YP_001479540.1 157371551 5603239 complement(3670591..3671088) 1 NC_009832.1 PFAM: YfbU family protein; KEGG: yen:YE1336 hypothetical protein; hypothetical protein 3671088 5603239 Spro_3314 Serratia proteamaculans 568 hypothetical protein YP_001479540.1 3670591 R 399741 CDS YP_001479541.1 157371552 5603181 complement(3671233..3671688) 1 NC_009832.1 PFAM: protein of unknown function DUF412; KEGG: yen:YE1335 hypothetical protein; hypothetical protein 3671688 5603181 Spro_3315 Serratia proteamaculans 568 hypothetical protein YP_001479541.1 3671233 R 399741 CDS YP_001479542.1 157371553 5603182 3672043..3673245 1 NC_009832.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3673245 5603182 Spro_3316 Serratia proteamaculans 568 acetate kinase YP_001479542.1 3672043 D 399741 CDS YP_001479543.1 157371554 5603183 3673293..3675482 1 NC_009832.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3675482 5603183 Spro_3317 Serratia proteamaculans 568 phosphate acetyltransferase YP_001479543.1 3673293 D 399741 CDS YP_001479544.1 157371555 5603599 complement(3675550..3676107) 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA3042 putative NUDIX hydrolase; NUDIX hydrolase 3676107 5603599 Spro_3318 Serratia proteamaculans 568 NUDIX hydrolase YP_001479544.1 3675550 R 399741 CDS YP_001479545.1 157371556 5603600 complement(3676198..3676749) 1 NC_009832.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: ypi:YpsIP31758_1434 phosphodiesterase, MJ0936 family; phosphodiesterase 3676749 5603600 Spro_3319 Serratia proteamaculans 568 phosphodiesterase YP_001479545.1 3676198 R 399741 CDS YP_001479546.1 157371557 5603601 3676998..3677627 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: eca:ECA3044 putative glutathione-S transferase; glutathione S-transferase domain-containing protein 3677627 5603601 Spro_3320 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001479546.1 3676998 D 399741 CDS YP_001479547.1 157371558 5603626 3677732..3678103 1 NC_009832.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 3678103 folX 5603626 folX Serratia proteamaculans 568 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_001479547.1 3677732 D 399741 CDS YP_001479548.1 157371559 5603627 3678131..3679045 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; domain of unknown function DUF1731; KEGG: ypi:YpsIP31758_1432 NAD dependent epimerase/dehydratase family protein; hypothetical protein 3679045 5603627 Spro_3322 Serratia proteamaculans 568 hypothetical protein YP_001479548.1 3678131 D 399741 CDS YP_001479549.1 157371560 5603628 complement(3679087..3679860) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE1321 histidine transport ATP-binding protein HisP; histidine/lysine/arginine/ornithine transporter subunit 3679860 5603628 Spro_3323 Serratia proteamaculans 568 histidine/lysine/arginine/ornithine transporter subunit YP_001479549.1 3679087 R 399741 CDS YP_001479550.1 157371561 5604537 complement(3679879..3680583) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1320 histidine transport system permease protein HisM; polar amino acid ABC transporter inner membrane subunit 3680583 5604537 Spro_3324 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001479550.1 3679879 R 399741 CDS YP_001479551.1 157371562 5604538 complement(3680580..3681266) 1 NC_009832.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1429 histidine ABC transporter, permease protein HisQ; polar amino acid ABC transporter inner membrane subunit 3681266 5604538 Spro_3325 Serratia proteamaculans 568 polar amino acid ABC transporter inner membrane subunit YP_001479551.1 3680580 R 399741 CDS YP_001479552.1 157371563 5604539 complement(3681352..3682134) 1 NC_009832.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: yen:YE1318 histidine-binding periplasmic protein; cationic amino acid ABC transporter periplasmic binding protein 3682134 5604539 Spro_3326 Serratia proteamaculans 568 cationic amino acid ABC transporter periplasmic binding protein YP_001479552.1 3681352 R 399741 CDS YP_001479553.1 157371564 5602485 complement(3682436..3683008) 1 NC_009832.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3683008 5602485 Spro_3327 Serratia proteamaculans 568 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001479553.1 3682436 R 399741 CDS YP_001479554.1 157371565 5602486 complement(3683139..3684656) 1 NC_009832.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3684656 5602486 Spro_3328 Serratia proteamaculans 568 amidophosphoribosyltransferase YP_001479554.1 3683139 R 399741 CDS YP_001479555.1 157371566 5602487 complement(3684678..3685178) 1 NC_009832.1 membrane protein required for colicin V production; colicin V production protein 3685178 5602487 Spro_3329 Serratia proteamaculans 568 colicin V production protein YP_001479555.1 3684678 R 399741 CDS YP_001479556.1 157371567 5602508 complement(3685411..3686160) 1 NC_009832.1 PFAM: Sporulation domain protein; KEGG: yen:YE1313 hypothetical protein; hypothetical protein 3686160 5602508 Spro_3330 Serratia proteamaculans 568 hypothetical protein YP_001479556.1 3685411 R 399741 CDS YP_001479557.1 157371568 5602509 complement(3686161..3687423) 1 NC_009832.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: yen:YE1312 putative FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3687423 5602509 Spro_3331 Serratia proteamaculans 568 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001479557.1 3686161 R 399741 CDS YP_001479558.1 157371569 5602510 complement(3687576..3688484) 1 NC_009832.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3688484 5602510 Spro_3332 Serratia proteamaculans 568 acetyl-CoA carboxylase subunit beta YP_001479558.1 3687576 R 399741 CDS YP_001479559.1 157371570 5602537 complement(3688715..3689377) 1 NC_009832.1 PFAM: SNARE associated Golgi protein; KEGG: kpn:KPN_02707 putative integral membrane protein; hypothetical protein 3689377 5602537 Spro_3333 Serratia proteamaculans 568 hypothetical protein YP_001479559.1 3688715 R 399741 CDS YP_001479560.1 157371571 5602538 complement(3689453..3690274) 1 NC_009832.1 KEGG: eca:ECA3058 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; tRNA pseudouridine synthase A 3690274 5602538 Spro_3334 Serratia proteamaculans 568 tRNA pseudouridine synthase A YP_001479560.1 3689453 R 399741 CDS YP_001479561.1 157371572 5602539 complement(3690274..3691284) 1 NC_009832.1 PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: ypi:YpsIP31758_1419 aspartate-semialdehyde dehydrogenase family protein; putative semialdehyde dehydrogenase 3691284 5602539 Spro_3335 Serratia proteamaculans 568 putative semialdehyde dehydrogenase YP_001479561.1 3690274 R 399741 CDS YP_001479562.1 157371573 5602543 complement(3691375..3692496) 1 NC_009832.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: yps:YPTB2620 putative D-isomer specific 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3692496 5602543 Spro_3336 Serratia proteamaculans 568 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001479562.1 3691375 R 399741 CDS YP_001479563.1 157371574 5602544 complement(3692550..3693323) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1306 putative AraC-family regulatory protein; AraC family transcriptional regulator 3693323 5602544 Spro_3337 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479563.1 3692550 R 399741 CDS YP_001479564.1 157371575 5602545 3693426..3694355 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1305 hypothetical protein; hypothetical protein 3694355 5602545 Spro_3338 Serratia proteamaculans 568 hypothetical protein YP_001479564.1 3693426 D 399741 CDS YP_001479565.1 157371576 5602606 complement(3695392..3696810) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: plu:plu3178 two-component sensor kinase; integral membrane sensor signal transduction histidine kinase 3696810 5602606 Spro_3339 Serratia proteamaculans 568 integral membrane sensor signal transduction histidine kinase YP_001479565.1 3695392 R 399741 CDS YP_001479566.1 157371577 5602607 complement(3696797..3697471) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: plu:plu3179 two-component response regulator; two component transcriptional regulator 3697471 5602607 Spro_3340 Serratia proteamaculans 568 two component transcriptional regulator YP_001479566.1 3696797 R 399741 CDS YP_001479567.1 157371578 5602608 complement(3697688..3698008) 1 NC_009832.1 hypothetical protein 3698008 5602608 Spro_3341 Serratia proteamaculans 568 hypothetical protein YP_001479567.1 3697688 R 399741 CDS YP_001479568.1 157371579 5602623 3698308..3699288 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: plu:plu3181 putative tricarboxylic transport membrane protein; hypothetical protein 3699288 5602623 Spro_3342 Serratia proteamaculans 568 hypothetical protein YP_001479568.1 3698308 D 399741 CDS YP_001479569.1 157371580 5602624 3699301..3699732 1 NC_009832.1 KEGG: stm:STM2787 tricarboxylic transport; tricarboxylic transport 3699732 5602624 Spro_3343 Serratia proteamaculans 568 tricarboxylic transport YP_001479569.1 3699301 D 399741 CDS YP_001479570.1 157371581 5602625 3699744..3701261 1 NC_009832.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: plu:plu3183 TctA protein; hypothetical protein 3701261 5602625 Spro_3344 Serratia proteamaculans 568 hypothetical protein YP_001479570.1 3699744 D 399741 CDS YP_001479571.1 157371582 5602640 complement(3701295..3701924) 1 NC_009832.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vco:VC0395_0977 antibiotic acetyltransferase; hexapaptide repeat-containing transferase 3701924 5602640 Spro_3345 Serratia proteamaculans 568 hexapaptide repeat-containing transferase YP_001479571.1 3701295 R 399741 CDS YP_001479572.1 157371583 5602641 complement(3702080..3703075) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: yen:YE1304 putative inner membrane protein; hypothetical protein 3703075 5602641 Spro_3346 Serratia proteamaculans 568 hypothetical protein YP_001479572.1 3702080 R 399741 CDS YP_001479573.1 157371584 5602642 3703202..3704704 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE1303 hypothetical protein; transcriptional regulator 3704704 5602642 Spro_3347 Serratia proteamaculans 568 transcriptional regulator YP_001479573.1 3703202 D 399741 CDS YP_001479574.1 157371585 5602668 complement(3704713..3705213) 1 NC_009832.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: yen:YE1302 putative metal resistance protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3705213 5602668 Spro_3348 Serratia proteamaculans 568 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001479574.1 3704713 R 399741 CDS YP_001479575.1 157371586 5602669 complement(3705206..3705922) 1 NC_009832.1 PFAM: DSBA oxidoreductase; KEGG: yen:YE1301 putative metal resistance protein; DSBA oxidoreductase 3705922 5602669 Spro_3349 Serratia proteamaculans 568 DSBA oxidoreductase YP_001479575.1 3705206 R 399741 CDS YP_001479576.1 157371587 5602670 complement(3705919..3707955) 1 NC_009832.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: yen:YE1300 putative metal resistance protein; cytochrome C biogenesis transmembrane protein 3707955 5602670 Spro_3350 Serratia proteamaculans 568 cytochrome C biogenesis transmembrane protein YP_001479576.1 3705919 R 399741 CDS YP_001479577.1 157371588 5602671 complement(3708005..3708370) 1 NC_009832.1 KEGG: yen:YE1299 putative metal resistance protein; putative metal resistance protein 3708370 5602671 Spro_3351 Serratia proteamaculans 568 putative metal resistance protein YP_001479577.1 3708005 R 399741 CDS YP_001479578.1 157371589 5602672 3708549..3709577 1 NC_009832.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 3709577 flk 5602672 flk Serratia proteamaculans 568 flagella biosynthesis regulator YP_001479578.1 3708549 D 399741 CDS YP_001479579.1 157371590 5602673 complement(3709623..3710888) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1471 major facilitator superfamily MFS_1; major facilitator transporter 3710888 5602673 Spro_3353 Serratia proteamaculans 568 major facilitator transporter YP_001479579.1 3709623 R 399741 CDS YP_001479580.1 157371591 5602675 complement(3710925..3711488) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_5016 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3711488 5602675 Spro_3354 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479580.1 3710925 R 399741 CDS YP_001479581.1 157371592 5602676 complement(3711485..3713455) 1 NC_009832.1 PFAM: Carbamoyltransferase; KEGG: yen:YE0544 putative transferase; carbamoyltransferase 3713455 5602676 Spro_3355 Serratia proteamaculans 568 carbamoyltransferase YP_001479581.1 3711485 R 399741 CDS YP_001479582.1 157371593 5602677 complement(3713485..3714201) 1 NC_009832.1 KEGG: bvi:Bcep1808_5012 hypothetical protein; hypothetical protein 3714201 5602677 Spro_3356 Serratia proteamaculans 568 hypothetical protein YP_001479582.1 3713485 R 399741 CDS YP_001479583.1 157371594 5602713 complement(3714226..3714933) 1 NC_009832.1 KEGG: bvi:Bcep1808_5012 hypothetical protein; hypothetical protein 3714933 5602713 Spro_3357 Serratia proteamaculans 568 hypothetical protein YP_001479583.1 3714226 R 399741 CDS YP_001479584.1 157371595 5602714 complement(3715811..3716707) 1 NC_009832.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rba:RB4127 probable secreted protein; endonuclease/exonuclease/phosphatase 3716707 5602714 Spro_3358 Serratia proteamaculans 568 endonuclease/exonuclease/phosphatase YP_001479584.1 3715811 R 399741 CDS YP_001479585.1 157371596 5602715 3716922..3718154 1 NC_009832.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3718154 5602715 Spro_3359 Serratia proteamaculans 568 peptidase T YP_001479585.1 3716922 D 399741 CDS YP_001479586.1 157371597 5602716 complement(3718200..3719312) 1 NC_009832.1 PFAM: Citrate transporter; KEGG: yen:YE1297 putative inner membrane protein; citrate transporter 3719312 5602716 Spro_3360 Serratia proteamaculans 568 citrate transporter YP_001479586.1 3718200 R 399741 CDS YP_001479587.1 157371598 5602717 3719469..3720500 1 NC_009832.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 3720500 5602717 Spro_3361 Serratia proteamaculans 568 thiamine biosynthesis lipoprotein ApbE YP_001479587.1 3719469 D 399741 CDS YP_001479588.1 157371599 5602718 complement(3720707..3723826) 1 NC_009832.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: yen:YE3630 putative cation efflux system protein; CzcA family heavy metal efflux protein 3723826 5602718 Spro_3362 Serratia proteamaculans 568 CzcA family heavy metal efflux protein YP_001479588.1 3720707 R 399741 CDS YP_001479589.1 157371600 5602753 complement(3723823..3725274) 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: yen:YE3629 putative efflux system protein; RND family efflux transporter MFP subunit 3725274 5602753 Spro_3363 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001479589.1 3723823 R 399741 CDS YP_001479590.1 157371601 5602754 complement(3725271..3726530) 1 NC_009832.1 PFAM: outer membrane efflux protein; KEGG: yen:YE3628 outer membrane efflux protein; outer membrane efflux protein 3726530 5602754 Spro_3364 Serratia proteamaculans 568 outer membrane efflux protein YP_001479590.1 3725271 R 399741 CDS YP_001479591.1 157371602 5602755 complement(3726541..3726864) 1 NC_009832.1 KEGG: yen:YE3627 hypothetical protein; hypothetical protein 3726864 5602755 Spro_3365 Serratia proteamaculans 568 hypothetical protein YP_001479591.1 3726541 R 399741 CDS YP_001479592.1 157371603 5602935 complement(3726933..3727355) 1 NC_009832.1 KEGG: eca:ECA1387 hypothetical protein; hypothetical protein 3727355 5602935 Spro_3366 Serratia proteamaculans 568 hypothetical protein YP_001479592.1 3726933 R 399741 CDS YP_001479593.1 157371604 5602936 complement(3727560..3727781) 1 NC_009832.1 KEGG: stm:STM3392 putative outer membrane lipoprotein; putative outer membrane lipoprotein 3727781 5602936 Spro_3367 Serratia proteamaculans 568 putative outer membrane lipoprotein YP_001479593.1 3727560 R 399741 CDS YP_001479594.1 157371605 5602937 complement(3727993..3729207) 1 NC_009832.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 3729207 5602937 Spro_3368 Serratia proteamaculans 568 3-oxoacyl-(acyl carrier protein) synthase I YP_001479594.1 3727993 R 399741 CDS YP_001479595.1 157371606 5602982 3729378..3731399 1 NC_009832.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3731399 mnmC 5602982 mnmC Serratia proteamaculans 568 5-methylaminomethyl-2-thiouridine methyltransferase YP_001479595.1 3729378 D 399741 CDS YP_001479596.1 157371607 5602983 complement(3731444..3731725) 1 NC_009832.1 PFAM: YfcL protein; KEGG: kpn:KPN_02715 hypothetical protein; YfcL protein 3731725 5602983 Spro_3370 Serratia proteamaculans 568 YfcL protein YP_001479596.1 3731444 R 399741 CDS YP_001479597.1 157371608 5602984 complement(3731757..3732314) 1 NC_009832.1 PFAM: protein of unknown function DUF462; KEGG: yen:YE1284 hypothetical protein; hypothetical protein 3732314 5602984 Spro_3371 Serratia proteamaculans 568 hypothetical protein YP_001479597.1 3731757 R 399741 CDS YP_001479598.1 157371609 5603046 complement(3732379..3733179) 1 NC_009832.1 PFAM: protein of unknown function DUF81; KEGG: yen:YE1283 hypothetical protein; hypothetical protein 3733179 5603046 Spro_3372 Serratia proteamaculans 568 hypothetical protein YP_001479598.1 3732379 R 399741 CDS YP_001479599.1 157371610 5603047 complement(3733183..3734010) 1 NC_009832.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 3734010 mepA 5603047 mepA Serratia proteamaculans 568 penicillin-insensitive murein endopeptidase YP_001479599.1 3733183 R 399741 CDS YP_001479600.1 157371611 5603048 complement(3734016..3735101) 1 NC_009832.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3735101 5603048 Spro_3374 Serratia proteamaculans 568 chorismate synthase YP_001479600.1 3734016 R 399741 CDS YP_001479601.1 157371612 5603126 complement(3735164..3736138) 1 NC_009832.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3736138 5603126 Spro_3375 Serratia proteamaculans 568 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001479601.1 3735164 R 399741 CDS YP_001479602.1 157371613 5603127 3736267..3736797 1 NC_009832.1 PFAM: Smr protein/MutS2; KEGG: yen:YE1279 hypothetical protein; hypothetical protein 3736797 5603127 Spro_3376 Serratia proteamaculans 568 hypothetical protein YP_001479602.1 3736267 D 399741 CDS YP_001479603.1 157371614 5603128 complement(3736863..3737345) 1 NC_009832.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: yen:YE1278 putative phosphohistidine phosphatase; phosphohistidine phosphatase 3737345 5603128 Spro_3377 Serratia proteamaculans 568 phosphohistidine phosphatase YP_001479603.1 3736863 R 399741 CDS YP_001479604.1 157371615 5603340 complement(3737751..3739916) 1 NC_009832.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 3739916 fadJ 5603340 fadJ Serratia proteamaculans 568 multifunctional fatty acid oxidation complex subunit alpha YP_001479604.1 3737751 R 399741 CDS YP_001479605.1 157371616 5603341 complement(3739916..3741226) 1 NC_009832.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 3741226 fadI 5603341 fadI Serratia proteamaculans 568 3-ketoacyl-CoA thiolase YP_001479605.1 3739916 R 399741 CDS YP_001479606.1 157371617 5603342 complement(3741418..3741714) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA3080 hypothetical protein; hypothetical protein 3741714 5603342 Spro_3380 Serratia proteamaculans 568 hypothetical protein YP_001479606.1 3741418 R 399741 CDS YP_001479607.1 157371618 5603373 3742120..3743442 1 NC_009832.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: kpn:KPN_02726 long-chain fatty acid transport protein (outer membrane flp protein); long-chain fatty acid outer membrane transporter 3743442 5603373 Spro_3381 Serratia proteamaculans 568 long-chain fatty acid outer membrane transporter YP_001479607.1 3742120 D 399741 CDS YP_001479608.1 157371619 5603374 complement(3743556..3744314) 1 NC_009832.1 PFAM: VacJ family lipoprotein; KEGG: ypi:YpsIP31758_1396 lipoprotein VacJ; VacJ family lipoprotein 3744314 5603374 Spro_3382 Serratia proteamaculans 568 VacJ family lipoprotein YP_001479608.1 3743556 R 399741 CDS YP_001479609.1 157371620 5603375 complement(3744350..3745561) 1 NC_009832.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: yen:YE1271 VacJ lipoprotein; TPR repeat-containing protein 3745561 5603375 Spro_3383 Serratia proteamaculans 568 TPR repeat-containing protein YP_001479609.1 3744350 R 399741 CDS YP_001479610.1 157371621 5603406 complement(3745561..3746034) 1 NC_009832.1 PFAM: cytochrome C biogenesis protein; KEGG: ypp:YPDSF_2019 cytochrome c-type biogenesis protein; cytochrome C biogenesis protein 3746034 5603406 Spro_3384 Serratia proteamaculans 568 cytochrome C biogenesis protein YP_001479610.1 3745561 R 399741 CDS YP_001479611.1 157371622 5603407 complement(3746031..3746582) 1 NC_009832.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: yen:YE1269 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 3746582 5603407 Spro_3385 Serratia proteamaculans 568 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001479611.1 3746031 R 399741 CDS YP_001479612.1 157371623 5603408 complement(3746579..3748549) 1 NC_009832.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: yen:YE1268 putative cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein CcmF 3748549 5603408 Spro_3386 Serratia proteamaculans 568 cytochrome c-type biogenesis protein CcmF YP_001479612.1 3746579 R 399741 CDS YP_001479613.1 157371624 5603547 complement(3748546..3749040) 1 NC_009832.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 3749040 5603547 Spro_3387 Serratia proteamaculans 568 cytochrome c-type biogenesis protein CcmE YP_001479613.1 3748546 R 399741 CDS YP_001479614.1 157371625 5603548 complement(3749037..3749273) 1 NC_009832.1 PFAM: Heme exporter protein D (CcmD); KEGG: yen:YE1266 putative heme exporter protein D; heme exporter protein CcmD 3749273 5603548 Spro_3388 Serratia proteamaculans 568 heme exporter protein CcmD YP_001479614.1 3749037 R 399741 CDS YP_001479615.1 157371626 5603549 complement(3749270..3750007) 1 NC_009832.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: yen:YE1265 putative heme exporter protein C; heme exporter protein CcmC 3750007 5603549 Spro_3389 Serratia proteamaculans 568 heme exporter protein CcmC YP_001479615.1 3749270 R 399741 CDS YP_001479616.1 157371627 5603561 complement(3750126..3750785) 1 NC_009832.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: ypi:YpsIP31758_1388 heme exporter protein CcmB; heme exporter protein CcmB 3750785 5603561 Spro_3390 Serratia proteamaculans 568 heme exporter protein CcmB YP_001479616.1 3750126 R 399741 CDS YP_001479617.1 157371628 5603562 complement(3750785..3751465) 1 NC_009832.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 3751465 5603562 Spro_3391 Serratia proteamaculans 568 cytochrome c biogenesis protein CcmA YP_001479617.1 3750785 R 399741 CDS YP_001479618.1 157371629 5603563 3751669..3752598 1 NC_009832.1 KEGG: yen:YE1262 putative inner membrane protein; hypothetical protein 3752598 5603563 Spro_3392 Serratia proteamaculans 568 hypothetical protein YP_001479618.1 3751669 D 399741 CDS YP_001479619.1 157371630 5603665 3752888..3753517 1 NC_009832.1 KEGG: kpn:KPN_02277 putative nucleoprotein/polynucleotide-associated enzyme; putative nucleoprotein/polynucleotide-associated enzyme 3753517 5603665 Spro_3393 Serratia proteamaculans 568 putative nucleoprotein/polynucleotide-associated enzyme YP_001479619.1 3752888 D 399741 CDS YP_001479620.1 157371631 5603703 3753702..3754631 1 NC_009832.1 regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 3754631 5603703 Spro_3394 Serratia proteamaculans 568 DNA-binding transcriptional regulator DsdC YP_001479620.1 3753702 D 399741 CDS YP_001479621.1 157371632 5603704 complement(3754666..3754965) 1 NC_009832.1 hypothetical protein 3754965 5603704 Spro_3395 Serratia proteamaculans 568 hypothetical protein YP_001479621.1 3754666 R 399741 CDS YP_001479622.1 157371633 5603714 complement(3754969..3755892) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gsu:GSU3388 hypothetical protein; hypothetical protein 3755892 5603714 Spro_3396 Serratia proteamaculans 568 hypothetical protein YP_001479622.1 3754969 R 399741 CDS YP_001479623.1 157371634 5603715 complement(3755983..3756258) 1 NC_009832.1 KEGG: stt:t4290 hypothetical protein; hypothetical protein 3756258 5603715 Spro_3397 Serratia proteamaculans 568 hypothetical protein YP_001479623.1 3755983 R 399741 CDS YP_001479624.1 157371635 5603716 3756696..3757847 1 NC_009832.1 KEGG: kpn:KPN_00475 putative outer membrane protein; putative outer membrane protein 3757847 5603716 Spro_3398 Serratia proteamaculans 568 putative outer membrane protein YP_001479624.1 3756696 D 399741 CDS YP_001479625.1 157371636 5603784 complement(3757904..3758989) 1 NC_009832.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 3758989 5603784 Spro_3399 Serratia proteamaculans 568 murein hydrolase B YP_001479625.1 3757904 R 399741 CDS YP_001479626.1 157371637 5603785 3759279..3759719 1 NC_009832.1 KEGG: yen:YE1233 hypothetical protein; hypothetical protein 3759719 5603785 Spro_3400 Serratia proteamaculans 568 hypothetical protein YP_001479626.1 3759279 D 399741 CDS YP_001479627.1 157371638 5603786 complement(3760588..3761823) 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: yen:YE1231 putative aminotransferase; aminotransferase 3761823 5603786 Spro_3401 Serratia proteamaculans 568 aminotransferase YP_001479627.1 3760588 R 399741 CDS YP_001479628.1 157371639 5603790 complement(3761945..3762484) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE1230 putative acetyltransferase; GCN5-like N-acetyltransferase 3762484 5603790 Spro_3402 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479628.1 3761945 R 399741 CDS YP_001479629.1 157371640 5603791 3762673..3763920 1 NC_009832.1 PFAM: protein of unknown function DUF1479; KEGG: yen:YE1229 hypothetical protein; hypothetical protein 3763920 5603791 Spro_3403 Serratia proteamaculans 568 hypothetical protein YP_001479629.1 3762673 D 399741 CDS YP_001479630.1 157371641 5603792 3764030..3765721 1 NC_009832.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: yen:YE1228 two-component system histidine kinase; signal transduction histidine kinase LytS 3765721 5603792 Spro_3404 Serratia proteamaculans 568 signal transduction histidine kinase LytS YP_001479630.1 3764030 D 399741 CDS YP_001479631.1 157371642 5603956 3765718..3766452 1 NC_009832.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: yen:YE1227 putative two-component system response-regulator; LytTR family two component transcriptional regulator 3766452 5603956 Spro_3405 Serratia proteamaculans 568 LytTR family two component transcriptional regulator YP_001479631.1 3765718 D 399741 CDS YP_001479632.1 157371643 5603957 3766777..3768003 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1226 putative membrane transport protein; major facilitator transporter 3768003 5603957 Spro_3406 Serratia proteamaculans 568 major facilitator transporter YP_001479632.1 3766777 D 399741 CDS YP_001479633.1 157371644 5603958 complement(3768067..3769029) 1 NC_009832.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 3769029 glk 5603958 glk Serratia proteamaculans 568 glucokinase YP_001479633.1 3768067 R 399741 CDS YP_001479634.1 157371645 5604001 3769373..3770620 1 NC_009832.1 PFAM: Chloride channel core; KEGG: ecc:c2928 hypothetical protein; hypothetical protein 3770620 5604001 Spro_3408 Serratia proteamaculans 568 hypothetical protein YP_001479634.1 3769373 D 399741 CDS YP_001479635.1 157371646 5604002 complement(3770617..3771309) 1 NC_009832.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: yen:YE1289 putative aspartate/glutamate racemase; aspartate racemase 3771309 5604002 Spro_3409 Serratia proteamaculans 568 aspartate racemase YP_001479635.1 3770617 R 399741 CDS YP_001479636.1 157371647 5604003 complement(3771376..3771828) 1 NC_009832.1 PFAM: transmembrane pair domain protein; KEGG: yen:YE1224 hypothetical protein; transmembrane pair domain-containing protein 3771828 5604003 Spro_3410 Serratia proteamaculans 568 transmembrane pair domain-containing protein YP_001479636.1 3771376 R 399741 CDS YP_001479637.1 157371648 5604100 3771928..3772818 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1223 putative LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 3772818 5604100 Spro_3411 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479637.1 3771928 D 399741 CDS YP_001479638.1 157371649 5604101 complement(3772794..3774455) 1 NC_009832.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: yen:YE1222 indole-3-pyruvate decarboxylase; thiamine pyrophosphate binding domain-containing protein 3774455 5604101 Spro_3412 Serratia proteamaculans 568 thiamine pyrophosphate binding domain-containing protein YP_001479638.1 3772794 R 399741 CDS YP_001479639.1 157371650 5604102 3774704..3775693 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: yen:YE1221 putative ion channel protein; aldo/keto reductase 3775693 5604102 Spro_3413 Serratia proteamaculans 568 aldo/keto reductase YP_001479639.1 3774704 D 399741 CDS YP_001479640.1 157371651 5604185 3775924..3776325 1 NC_009832.1 KEGG: ypi:YpsIP31758_1328 hypothetical protein; hypothetical protein 3776325 5604185 Spro_3414 Serratia proteamaculans 568 hypothetical protein YP_001479640.1 3775924 D 399741 CDS YP_001479641.1 157371652 5604186 complement(3776547..3777779) 1 NC_009832.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: yen:YE1219 manganese transport protein MntH; manganese transport protein MntH 3777779 5604186 Spro_3415 Serratia proteamaculans 568 manganese transport protein MntH YP_001479641.1 3776547 R 399741 CDS YP_001479642.1 157371653 5604187 3778158..3779345 1 NC_009832.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: yen:YE1217 nucleoside permease; nucleoside transporter 3779345 5604187 Spro_3416 Serratia proteamaculans 568 nucleoside transporter YP_001479642.1 3778158 D 399741 CDS YP_001479643.1 157371654 5603084 complement(3779962..3781371) 1 NC_009832.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3781371 gltX 5603084 gltX Serratia proteamaculans 568 glutamyl-tRNA synthetase YP_001479643.1 3779962 R 399741 CDS YP_001479644.1 157371655 5602605 complement(3782523..3783281) 1 NC_009832.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 3783281 5602605 Spro_3418 Serratia proteamaculans 568 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_001479644.1 3782523 R 399741 CDS YP_001479645.1 157371656 5604205 complement(3783281..3784135) 1 NC_009832.1 PFAM: isochorismatase hydrolase; phosphopantetheine-binding; KEGG: kpn:KPN_00613 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; isochorismatase 3784135 5604205 Spro_3419 Serratia proteamaculans 568 isochorismatase YP_001479645.1 3783281 R 399741 CDS YP_001479646.1 157371657 5604240 complement(3784139..3785767) 1 NC_009832.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 3785767 entE 5604240 entE Serratia proteamaculans 568 enterobactin synthase subunit E YP_001479646.1 3784139 R 399741 CDS YP_001479647.1 157371658 5604241 complement(3785776..3786984) 1 NC_009832.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: kpn:KPN_00611 isochorismate synthase; isochorismate synthase 3786984 5604241 Spro_3421 Serratia proteamaculans 568 isochorismate synthase YP_001479647.1 3785776 R 399741 CDS YP_001479648.1 157371659 5604242 3787183..3788142 1 NC_009832.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 3788142 5604242 Spro_3422 Serratia proteamaculans 568 iron-enterobactin transporter periplasmic binding protein YP_001479648.1 3787183 D 399741 CDS YP_001479649.1 157371660 5604339 complement(3788129..3789397) 1 NC_009832.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS 3789397 5604339 Spro_3423 Serratia proteamaculans 568 enterobactin exporter EntS YP_001479649.1 3788129 R 399741 CDS YP_001479650.1 157371661 5604340 3789533..3790606 1 NC_009832.1 with FepBCG is involved in the transport of ferric enterobactin; iron-enterobactin transporter membrane protein 3790606 5604340 Spro_3424 Serratia proteamaculans 568 iron-enterobactin transporter membrane protein YP_001479650.1 3789533 D 399741 CDS YP_001479651.1 157371662 5604341 3790606..3791631 1 NC_009832.1 with FepBCD is involved in the transport of ferric enterobactin; iron-enterobactin transporter permease 3791631 5604341 Spro_3425 Serratia proteamaculans 568 iron-enterobactin transporter permease YP_001479651.1 3790606 D 399741 CDS YP_001479652.1 157371663 5604342 3791628..3792431 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecj:JW0580 iron-enterobactin transporter subunit; ABC transporter-like protein 3792431 5604342 Spro_3426 Serratia proteamaculans 568 ABC transporter-like protein YP_001479652.1 3791628 D 399741 CDS YP_001479653.1 157371664 5604343 complement(3792507..3796484) 1 NC_009832.1 with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; enterobactin synthase subunit F 3796484 entF 5604343 entF Serratia proteamaculans 568 enterobactin synthase subunit F YP_001479653.1 3792507 R 399741 CDS YP_001479654.1 157371665 5604344 complement(3796484..3796690) 1 NC_009832.1 PFAM: MbtH domain protein; KEGG: tfu:Tfu_1863 putative conserved protein MbtH; MbtH domain-containing protein 3796690 5604344 Spro_3428 Serratia proteamaculans 568 MbtH domain-containing protein YP_001479654.1 3796484 R 399741 CDS YP_001479655.1 157371666 5604393 complement(3796665..3798035) 1 NC_009832.1 PFAM: putative esterase; KEGG: yen:YE3622 enterochelin esterase; enterobactin/ferric enterobactin esterase 3798035 5604393 Spro_3429 Serratia proteamaculans 568 enterobactin/ferric enterobactin esterase YP_001479655.1 3796665 R 399741 CDS YP_001479656.1 157371667 5604394 3798384..3800663 1 NC_009832.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 3800663 5604394 Spro_3430 Serratia proteamaculans 568 outer membrane receptor FepA YP_001479656.1 3798384 D 399741 CDS YP_001479657.1 157371668 5604395 complement(3800716..3802311) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA2801 periplasmic dipeptide transport protein; extracellular solute-binding protein 3802311 5604395 Spro_3431 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479657.1 3800716 R 399741 CDS YP_001479658.1 157371669 5604457 complement(3802451..3804136) 1 NC_009832.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 3804136 5604457 Spro_3432 Serratia proteamaculans 568 acetolactate synthase YP_001479658.1 3802451 R 399741 CDS YP_001479659.1 157371670 5604458 complement(3804176..3804955) 1 NC_009832.1 PFAM: alpha-acetolactate decarboxylase; KEGG: yen:YE4016 alpha-acetolactate decarboxylase; acetolactate decarboxylase 3804955 5604458 Spro_3433 Serratia proteamaculans 568 acetolactate decarboxylase YP_001479659.1 3804176 R 399741 CDS YP_001479660.1 157371671 5604459 3805335..3806294 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_4290 probable transcriptional regulator LysR-family; LysR family transcriptional regulator 3806294 5604459 Spro_3434 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479660.1 3805335 D 399741 CDS YP_001479661.1 157371672 5604460 complement(3806273..3807064) 1 NC_009832.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: kpn:KPN_00306 ethanolamine ammonia-lyase small subunit; ethanolamine ammonia-lyase 3807064 5604460 Spro_3435 Serratia proteamaculans 568 ethanolamine ammonia-lyase YP_001479661.1 3806273 R 399741 CDS YP_001479662.1 157371673 5604461 complement(3807061..3808446) 1 NC_009832.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: asa:ASA_0956 ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit 3808446 5604461 Spro_3436 Serratia proteamaculans 568 ethanolamine ammonia lyase large subunit YP_001479662.1 3807061 R 399741 CDS YP_001479663.1 157371674 5604462 3808587..3809135 1 NC_009832.1 PFAM: protein of unknown function DUF925; KEGG: yen:YE1214 hypothetical protein; hypothetical protein 3809135 5604462 Spro_3437 Serratia proteamaculans 568 hypothetical protein YP_001479663.1 3808587 D 399741 CDS YP_001479664.1 157371675 5604492 3809195..3809671 1 NC_009832.1 KEGG: yen:YE1213 hypothetical protein; hypothetical protein 3809671 5604492 Spro_3438 Serratia proteamaculans 568 hypothetical protein YP_001479664.1 3809195 D 399741 CDS YP_001479665.1 157371676 5604493 complement(3809693..3810394) 1 NC_009832.1 PFAM: RES domain protein; KEGG: plu:plu1483 hypothetical protein; RES domain-containing protein 3810394 5604493 Spro_3439 Serratia proteamaculans 568 RES domain-containing protein YP_001479665.1 3809693 R 399741 CDS YP_001479666.1 157371677 5604494 complement(3810387..3811040) 1 NC_009832.1 KEGG: plu:plu1482 hypothetical protein; hypothetical protein 3811040 5604494 Spro_3440 Serratia proteamaculans 568 hypothetical protein YP_001479666.1 3810387 R 399741 CDS YP_001479667.1 157371678 5604577 complement(3811269..3812189) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_2936 transcriptional regulator, LysR family; LysR family transcriptional regulator 3812189 5604577 Spro_3441 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479667.1 3811269 R 399741 CDS YP_001479668.1 157371679 5604578 3812285..3813277 1 NC_009832.1 PFAM: Bile acid:sodium symporter; KEGG: ssn:SSON_2498 putative cytochrome oxidase; bile acid:sodium symporter 3813277 5604578 Spro_3442 Serratia proteamaculans 568 bile acid:sodium symporter YP_001479668.1 3812285 D 399741 CDS YP_001479669.1 157371680 5604579 complement(3813312..3813527) 1 NC_009832.1 KEGG: ypi:YpsIP31758_1322 hypothetical protein; hypothetical protein 3813527 5604579 Spro_3443 Serratia proteamaculans 568 hypothetical protein YP_001479669.1 3813312 R 399741 CDS YP_001479670.1 157371681 5604610 complement(3813527..3815548) 1 NC_009832.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 3815548 ligA 5604610 ligA Serratia proteamaculans 568 NAD-dependent DNA ligase LigA YP_001479670.1 3813527 R 399741 CDS YP_001479671.1 157371682 5604611 complement(3815627..3816625) 1 NC_009832.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 3816625 5604611 Spro_3445 Serratia proteamaculans 568 cell division protein ZipA YP_001479671.1 3815627 R 399741 CDS YP_001479672.1 157371683 5604612 3816847..3817608 1 NC_009832.1 putative role in sulfur assimilation; putative sulfate transport protein CysZ 3817608 5604612 Spro_3446 Serratia proteamaculans 568 putative sulfate transport protein CysZ YP_001479672.1 3816847 D 399741 CDS YP_001479673.1 157371684 5604714 3817793..3818761 1 NC_009832.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3818761 5604714 Spro_3447 Serratia proteamaculans 568 cysteine synthase A YP_001479673.1 3817793 D 399741 CDS YP_001479674.1 157371685 5604715 3819157..3819414 1 NC_009832.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: eca:ECA0893 PTS system phosphocarrier protein; PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr 3819414 5604715 Spro_3448 Serratia proteamaculans 568 PTS system phosphohistidinoprotein-hexose phosphotransferase subunit Hpr YP_001479674.1 3819157 D 399741 CDS YP_001479675.1 157371686 5604716 3819461..3821188 1 NC_009832.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 3821188 5604716 Spro_3449 Serratia proteamaculans 568 phosphoenolpyruvate-protein phosphotransferase YP_001479675.1 3819461 D 399741 CDS YP_001479676.1 157371687 5604723 3821238..3821747 1 NC_009832.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit 3821747 5604723 Spro_3450 Serratia proteamaculans 568 PTS system glucose-specific transporter subunit YP_001479676.1 3821238 D 399741 CDS YP_001479677.1 157371688 5604724 complement(3821823..3823151) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1202 putative two-component system sensor kinase; integral membrane sensor signal transduction histidine kinase 3823151 5604724 Spro_3451 Serratia proteamaculans 568 integral membrane sensor signal transduction histidine kinase YP_001479677.1 3821823 R 399741 CDS YP_001479678.1 157371689 5604725 complement(3823151..3823831) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: yen:YE1201 putative two-component system response regulator; two component transcriptional regulator 3823831 5604725 Spro_3452 Serratia proteamaculans 568 two component transcriptional regulator YP_001479678.1 3823151 R 399741 CDS YP_001479679.1 157371690 5604732 complement(3824041..3824922) 1 NC_009832.1 TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: ypi:YpsIP31758_1303 cysteine synthase B; cysteine synthase B 3824922 5604732 Spro_3453 Serratia proteamaculans 568 cysteine synthase B YP_001479679.1 3824041 R 399741 CDS YP_001479680.1 157371691 5604733 complement(3825427..3826515) 1 NC_009832.1 KEGG: yen:YE1197 sulfate transport ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate/thiosulfate transporter subunit 3826515 5604733 Spro_3454 Serratia proteamaculans 568 sulfate/thiosulfate transporter subunit YP_001479680.1 3825427 R 399741 CDS YP_001479681.1 157371692 5604734 complement(3826505..3827380) 1 NC_009832.1 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease 3827380 cysW 5604734 cysW Serratia proteamaculans 568 sulfate/thiosulfate transporter permease YP_001479681.1 3826505 R 399741 CDS YP_001479682.1 157371693 5604744 complement(3827380..3828213) 1 NC_009832.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1300 sulfate/thiosulfate ABC transporter, permease protein CysT; sulfate/thiosulfate transporter subunit 3828213 5604744 Spro_3456 Serratia proteamaculans 568 sulfate/thiosulfate transporter subunit YP_001479682.1 3827380 R 399741 CDS YP_001479683.1 157371694 5604745 complement(3828213..3829235) 1 NC_009832.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_1299 sulfate/thiosulfate ABC transporter, periplasmic sulfate/thiosulfate-binding protein; thiosulfate transporter subunit 3829235 5604745 Spro_3457 Serratia proteamaculans 568 thiosulfate transporter subunit YP_001479683.1 3828213 R 399741 CDS YP_001479684.1 157371695 5604746 complement(3829437..3830336) 1 NC_009832.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: ypp:YPDSF_2130 hypothetical protein; Dyp-type peroxidase family protein 3830336 5604746 Spro_3458 Serratia proteamaculans 568 Dyp-type peroxidase family protein YP_001479684.1 3829437 R 399741 CDS YP_001479685.1 157371696 5604758 complement(3830504..3831088) 1 NC_009832.1 PFAM: protein of unknown function DUF1131; KEGG: ypi:YpsIP31758_1290 putative lipoprotein; hypothetical protein 3831088 5604758 Spro_3459 Serratia proteamaculans 568 hypothetical protein YP_001479685.1 3830504 R 399741 CDS YP_001479686.1 157371697 5604759 complement(3831222..3831686) 1 NC_009832.1 KEGG: kpn:KPN_02776 hypothetical protein; hypothetical protein 3831686 5604759 Spro_3460 Serratia proteamaculans 568 hypothetical protein YP_001479686.1 3831222 R 399741 CDS YP_001479687.1 157371698 5604760 3831862..3832260 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE1185 hypothetical protein; hypothetical protein 3832260 5604760 Spro_3461 Serratia proteamaculans 568 hypothetical protein YP_001479687.1 3831862 D 399741 CDS YP_001479688.1 157371699 5604764 complement(3832304..3832729) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ent:Ent638_2955 GCN5-related N-acetyltransferase; putative acetyltransferase 3832729 5604764 Spro_3462 Serratia proteamaculans 568 putative acetyltransferase YP_001479688.1 3832304 R 399741 CDS YP_001479689.1 157371700 5604765 3832935..3833834 1 NC_009832.1 PFAM: cell wall hydrolase/autolysin; KEGG: ent:Ent638_2956 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I 3833834 5604765 Spro_3463 Serratia proteamaculans 568 N-acetylmuramoyl-l-alanine amidase I YP_001479689.1 3832935 D 399741 CDS YP_001479690.1 157371701 5604766 3833904..3834824 1 NC_009832.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3834824 5604766 Spro_3464 Serratia proteamaculans 568 coproporphyrinogen III oxidase YP_001479690.1 3833904 D 399741 CDS YP_001479691.1 157371702 5604798 3834821..3835279 1 NC_009832.1 PFAM: protein of unknown function DUF188; KEGG: yen:YE1167 hypothetical protein; hypothetical protein 3835279 5604798 Spro_3465 Serratia proteamaculans 568 hypothetical protein YP_001479691.1 3834821 D 399741 CDS YP_001479692.1 157371703 5604799 complement(3835297..3837540) 1 NC_009832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbo:SBO_P082 colicin Js sensitive receptor protein; TonB-dependent receptor 3837540 5604799 Spro_3466 Serratia proteamaculans 568 TonB-dependent receptor YP_001479692.1 3835297 R 399741 CDS YP_001479693.1 157371704 5604800 complement(3837672..3839807) 1 NC_009832.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: plu:plu2716 protease II (oligopeptidase B); oligopeptidase B 3839807 5604800 Spro_3467 Serratia proteamaculans 568 oligopeptidase B YP_001479693.1 3837672 R 399741 CDS YP_001479694.1 157371705 5604834 complement(3839883..3840683) 1 NC_009832.1 TIGRFAM: TonB family protein; KEGG: sbo:SBO_P083 TonB-like colicin Js sensitive putative membrane protein; TonB family protein 3840683 5604834 Spro_3468 Serratia proteamaculans 568 TonB family protein YP_001479694.1 3839883 R 399741 CDS YP_001479695.1 157371706 5604835 complement(3840786..3841640) 1 NC_009832.1 PFAM: protein of unknown function DUF399; KEGG: plu:plu2718 hypothetical protein; hypothetical protein 3841640 5604835 Spro_3469 Serratia proteamaculans 568 hypothetical protein YP_001479695.1 3840786 R 399741 CDS YP_001479696.1 157371707 5604836 3841830..3843239 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: eca:ECA2798 probable S-methylmethionine permease; S-methylmethionine transporter 3843239 5604836 Spro_3470 Serratia proteamaculans 568 S-methylmethionine transporter YP_001479696.1 3841830 D 399741 CDS YP_001479697.1 157371708 5604855 3843229..3844167 1 NC_009832.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 3844167 mmuM 5604855 mmuM Serratia proteamaculans 568 homocysteine methyltransferase YP_001479697.1 3843229 D 399741 CDS YP_001479698.1 157371709 5604856 complement(3844221..3846500) 1 NC_009832.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3846500 5604856 Spro_3472 Serratia proteamaculans 568 malic enzyme YP_001479698.1 3844221 R 399741 CDS YP_001479699.1 157371710 5604857 complement(3846986..3847369) 1 NC_009832.1 KEGG: ypk:y0188 hypothetical protein; hypothetical protein 3847369 5604857 Spro_3473 Serratia proteamaculans 568 hypothetical protein YP_001479699.1 3846986 R 399741 CDS YP_001479700.1 157371711 5604861 complement(3847366..3847767) 1 NC_009832.1 KEGG: yen:YE1672 putative phagelysin; putative phagelysin 3847767 5604861 Spro_3474 Serratia proteamaculans 568 putative phagelysin YP_001479700.1 3847366 R 399741 CDS YP_001479701.1 157371712 5604862 complement(3847757..3848083) 1 NC_009832.1 TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda; KEGG: spt:SPA2398 lysis (holin); phage holin 3848083 5604862 Spro_3475 Serratia proteamaculans 568 phage holin YP_001479701.1 3847757 R 399741 CDS YP_001479702.1 157371713 5604863 3848380..3849879 1 NC_009832.1 KEGG: sde:Sde_3870 chitinase; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; chitinase 3849879 5604863 Spro_3476 Serratia proteamaculans 568 chitinase YP_001479702.1 3848380 D 399741 CDS YP_001479703.1 157371714 5604864 complement(3849977..3850918) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0757 transcriptional regulator, LysR family; LysR family transcriptional regulator 3850918 5604864 Spro_3477 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479703.1 3849977 R 399741 CDS YP_001479704.1 157371715 5604865 3851324..3851917 1 NC_009832.1 PFAM: chitin-binding domain 3 protein; KEGG: bca:BCE_2855 chitin binding protein, putative; chitin-binding domain-containing protein 3851917 5604865 Spro_3478 Serratia proteamaculans 568 chitin-binding domain-containing protein YP_001479704.1 3851324 D 399741 CDS YP_001479705.1 157371716 5604866 3852136..3853086 1 NC_009832.1 KEGG: eca:ECA0862 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase A 3853086 5604866 Spro_3479 Serratia proteamaculans 568 transaldolase A YP_001479705.1 3852136 D 399741 CDS YP_001479706.1 157371717 5604895 3853104..3855098 1 NC_009832.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3855098 5604895 Spro_3480 Serratia proteamaculans 568 transketolase YP_001479706.1 3853104 D 399741 CDS YP_001479707.1 157371718 5604896 3855733..3856281 1 NC_009832.1 PFAM: UreE urease accessory domain protein; KEGG: ypi:YpsIP31758_1080 urease accessory protein UreE; UreE urease accessory domain-containing protein 3856281 5604896 Spro_3481 Serratia proteamaculans 568 UreE urease accessory domain-containing protein YP_001479707.1 3855733 D 399741 CDS YP_001479708.1 157371719 5604897 3856396..3856818 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG1549 putative right origin-binding protein; AraC family transcriptional regulator 3856818 5604897 Spro_3482 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479708.1 3856396 D 399741 CDS YP_001479709.1 157371720 5604912 complement(3856868..3857443) 1 NC_009832.1 PFAM: NUDIX hydrolase; KEGG: yen:YE1161 hypothetical protein; NUDIX hydrolase 3857443 5604912 Spro_3483 Serratia proteamaculans 568 NUDIX hydrolase YP_001479709.1 3856868 R 399741 CDS YP_001479710.1 157371721 5604913 complement(3857575..3858192) 1 NC_009832.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC 3858192 5604913 Spro_3484 Serratia proteamaculans 568 cytochrome c-type protein NapC YP_001479710.1 3857575 R 399741 CDS YP_001479711.1 157371722 5604914 complement(3858204..3858653) 1 NC_009832.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit 3858653 napB 5604914 napB Serratia proteamaculans 568 citrate reductase cytochrome c-type subunit YP_001479711.1 3858204 R 399741 CDS YP_001479712.1 157371723 5604924 complement(3858709..3861195) 1 NC_009832.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 3861195 5604924 Spro_3486 Serratia proteamaculans 568 nitrate reductase catalytic subunit YP_001479712.1 3858709 R 399741 CDS YP_001479713.1 157371724 5604925 complement(3861192..3861458) 1 NC_009832.1 PFAM: NapD family protein; KEGG: ypp:YPDSF_2144 hypothetical protein; assembly protein for periplasmic nitrate reductase 3861458 5604925 Spro_3487 Serratia proteamaculans 568 assembly protein for periplasmic nitrate reductase YP_001479713.1 3861192 R 399741 CDS YP_001479714.1 157371725 5604926 complement(3861448..3861945) 1 NC_009832.1 TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ypi:YpsIP31758_1271 ferredoxin-type protein NapF; ferredoxin-type protein NapF 3861945 5604926 Spro_3488 Serratia proteamaculans 568 ferredoxin-type protein NapF YP_001479714.1 3861448 R 399741 CDS YP_001479715.1 157371726 5604927 3862495..3864177 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: eca:ECA1900 nitrate/nitrite sensor protein; nitrate/nitrite sensor protein NarQ 3864177 5604927 Spro_3489 Serratia proteamaculans 568 nitrate/nitrite sensor protein NarQ YP_001479715.1 3862495 D 399741 CDS YP_001479716.1 157371727 5604928 3864340..3864972 1 NC_009832.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: yen:YE1153 nitrate/nitrite response regulator protein NarP; two component LuxR family transcriptional regulator 3864972 5604928 Spro_3490 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001479716.1 3864340 D 399741 CDS YP_001479717.1 157371728 5604929 complement(3864999..3865292) 1 NC_009832.1 KEGG: ypi:YpsIP31758_1269 hypothetical protein; hypothetical protein 3865292 5604929 Spro_3491 Serratia proteamaculans 568 hypothetical protein YP_001479717.1 3864999 R 399741 CDS YP_001479718.1 157371729 5604945 3865560..3867641 1 NC_009832.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: yen:YE1151 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3867641 5604945 Spro_3492 Serratia proteamaculans 568 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001479718.1 3865560 D 399741 CDS YP_001479719.1 157371730 5604946 3867599..3868696 1 NC_009832.1 KEGG: yen:YE1151 multidrug efflux protein; multidrug efflux protein 3868696 5604946 Spro_3493 Serratia proteamaculans 568 multidrug efflux protein YP_001479719.1 3867599 D 399741 CDS YP_001479720.1 157371731 5604947 complement(3869115..3871262) 1 NC_009832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ent:Ent638_1099 TonB-dependent receptor; TonB-dependent receptor 3871262 5604947 Spro_3494 Serratia proteamaculans 568 TonB-dependent receptor YP_001479720.1 3869115 R 399741 CDS YP_001479721.1 157371732 5604972 3871549..3872619 1 NC_009832.1 KEGG: ent:Ent638_1100 putative receptor; putative receptor 3872619 5604972 Spro_3495 Serratia proteamaculans 568 putative receptor YP_001479721.1 3871549 D 399741 CDS YP_001479722.1 157371733 5604973 3872628..3874799 1 NC_009832.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo2994 probable TonB-dependent receptor; TonB-dependent siderophore receptor 3874799 5604973 Spro_3496 Serratia proteamaculans 568 TonB-dependent siderophore receptor YP_001479722.1 3872628 D 399741 CDS YP_001479723.1 157371734 5604974 3874927..3875409 1 NC_009832.1 KEGG: yen:YE1149 hypothetical protein; hypothetical protein 3875409 5604974 Spro_3497 Serratia proteamaculans 568 hypothetical protein YP_001479723.1 3874927 D 399741 CDS YP_001479724.1 157371735 5604982 3875421..3875852 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr1088 putative GNAT family acetyltransferase; GCN5-like N-acetyltransferase 3875852 5604982 Spro_3498 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479724.1 3875421 D 399741 CDS YP_001479725.1 157371736 5604983 complement(3875943..3876368) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2792 probable acetyltransferase; GCN5-like N-acetyltransferase 3876368 5604983 Spro_3499 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479725.1 3875943 R 399741 CDS YP_001479726.1 157371737 5604984 3876598..3876963 1 NC_009832.1 PFAM: arsenate reductase and related; KEGG: ypi:YpsIP31758_1256 hypothetical protein; hypothetical protein 3876963 5604984 Spro_3500 Serratia proteamaculans 568 hypothetical protein YP_001479726.1 3876598 D 399741 CDS YP_001479727.1 157371738 5605029 3876960..3878087 1 NC_009832.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3878087 5605029 Spro_3501 Serratia proteamaculans 568 succinyl-diaminopimelate desuccinylase YP_001479727.1 3876960 D 399741 CDS YP_001479728.1 157371739 5605030 3878084..3878758 1 NC_009832.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ypi:YpsIP31758_1254 D-alanyl-D-alanine carboxypeptidase family protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 3878758 5605030 Spro_3502 Serratia proteamaculans 568 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_001479728.1 3878084 D 399741 CDS YP_001479729.1 157371740 5605031 3878761..3878946 1 NC_009832.1 KEGG: yen:YE1145 hypothetical protein; hypothetical protein 3878946 5605031 Spro_3503 Serratia proteamaculans 568 hypothetical protein YP_001479729.1 3878761 D 399741 CDS YP_001479730.1 157371741 5605095 complement(3879100..3879789) 1 NC_009832.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH 3879789 5605095 Spro_3504 Serratia proteamaculans 568 esterase YpfH YP_001479730.1 3879100 R 399741 CDS YP_001479731.1 157371742 5605096 complement(3879907..3881919) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; protein of unknown function DUF699 ATPase putative; KEGG: yps:YPTB2778 putative acetyltransferase; hypothetical protein 3881919 5605096 Spro_3505 Serratia proteamaculans 568 hypothetical protein YP_001479731.1 3879907 R 399741 CDS YP_001479732.1 157371743 5605097 complement(3882121..3882987) 1 NC_009832.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: ypi:YpsIP31758_1250 metalloprotease-like protein; hypothetical protein 3882987 5605097 Spro_3506 Serratia proteamaculans 568 hypothetical protein YP_001479732.1 3882121 R 399741 CDS YP_001479733.1 157371744 5605106 complement(3883152..3883865) 1 NC_009832.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3883865 5605106 Spro_3507 Serratia proteamaculans 568 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001479733.1 3883152 R 399741 CDS YP_001479734.1 157371745 5605107 complement(3883992..3885044) 1 NC_009832.1 PFAM: NlpBDapX family lipoprotein; KEGG: yen:YE1138 lipoprotein; lipoprotein 3885044 5605107 Spro_3508 Serratia proteamaculans 568 lipoprotein YP_001479734.1 3883992 R 399741 CDS YP_001479735.1 157371746 5605108 complement(3885061..3885942) 1 NC_009832.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3885942 5605108 Spro_3509 Serratia proteamaculans 568 dihydrodipicolinate synthase YP_001479735.1 3885061 R 399741 CDS YP_001479736.1 157371747 5605130 3885972..3886658 1 NC_009832.1 negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 3886658 gcvR 5605130 gcvR Serratia proteamaculans 568 glycine cleavage system transcriptional repressor YP_001479736.1 3885972 D 399741 CDS YP_001479737.1 157371748 5605131 3886661..3887125 1 NC_009832.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 3887125 bcp 5605131 bcp Serratia proteamaculans 568 thioredoxin-dependent thiol peroxidase YP_001479737.1 3886661 D 399741 CDS YP_001479738.1 157371749 5605132 complement(3887175..3888245) 1 NC_009832.1 PFAM: protein of unknown function UPF0118; KEGG: yen:YE1133 hypothetical protein; hypothetical protein 3888245 5605132 Spro_3512 Serratia proteamaculans 568 hypothetical protein YP_001479738.1 3887175 R 399741 CDS YP_001479739.1 157371750 5605151 complement(3888413..3889030) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: plu:plu4154 hypothetical protein; lysine exporter protein LysE/YggA 3889030 5605151 Spro_3513 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001479739.1 3888413 R 399741 CDS YP_001479740.1 157371751 5605152 3889224..3889685 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: plu:plu4153 hypothetical protein; AsnC family transcriptional regulator 3889685 5605152 Spro_3514 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001479740.1 3889224 D 399741 CDS YP_001479741.1 157371752 5605153 complement(3889727..3890935) 1 NC_009832.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: swi:Swit_2959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3890935 5605153 Spro_3515 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001479741.1 3889727 R 399741 CDS YP_001479742.1 157371753 5605163 complement(3891083..3891625) 1 NC_009832.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: swi:Swit_2958 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3891625 5605163 Spro_3516 Serratia proteamaculans 568 BadM/Rrf2 family transcriptional regulator YP_001479742.1 3891083 R 399741 CDS YP_001479743.1 157371754 5605164 3891974..3893437 1 NC_009832.1 PFAM: peptidase M48 Ste24p; KEGG: eca:ECA1259 hypothetical protein; peptidase M48 Ste24p 3893437 5605164 Spro_3517 Serratia proteamaculans 568 peptidase M48 Ste24p YP_001479743.1 3891974 D 399741 CDS YP_001479744.1 157371755 5605165 3893458..3893811 1 NC_009832.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: ypi:YpsIP31758_1238 arsenate reductase (glutaredoxin); arsenate reductase 3893811 5605165 Spro_3518 Serratia proteamaculans 568 arsenate reductase YP_001479744.1 3893458 D 399741 CDS YP_001479745.1 157371756 5605202 complement(3893863..3894474) 1 NC_009832.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 3894474 5605202 Spro_3519 Serratia proteamaculans 568 DNA replication initiation factor YP_001479745.1 3893863 R 399741 CDS YP_001479746.1 157371757 5605203 3894793..3895308 1 NC_009832.1 KEGG: kpn:KPN_01758 putative cell envelope integrity inner membrane protein TolA; putative cell envelope integrity inner membrane protein TolA 3895308 5605203 Spro_3520 Serratia proteamaculans 568 putative cell envelope integrity inner membrane protein TolA YP_001479746.1 3894793 D 399741 CDS YP_001479747.1 157371758 5605204 3895338..3895586 1 NC_009832.1 PFAM: Transglycosylase-associated protein; KEGG: eca:ECA2044 hypothetical protein; hypothetical protein 3895586 5605204 Spro_3521 Serratia proteamaculans 568 hypothetical protein YP_001479747.1 3895338 D 399741 CDS YP_001479748.1 157371759 5605213 complement(3895638..3896927) 1 NC_009832.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ypi:YpsIP31758_1236 uracil permease; uracil transporter 3896927 5605213 Spro_3522 Serratia proteamaculans 568 uracil transporter YP_001479748.1 3895638 R 399741 CDS YP_001479749.1 157371760 5605214 complement(3896990..3897619) 1 NC_009832.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3897619 upp 5605214 upp Serratia proteamaculans 568 uracil phosphoribosyltransferase YP_001479749.1 3896990 R 399741 CDS YP_001479750.1 157371761 5605215 3897830..3898909 1 NC_009832.1 KEGG: yen:YE1127 putative phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine cyclo-ligase 3898909 5605215 Spro_3524 Serratia proteamaculans 568 phosphoribosylformylglycinamidine cyclo-ligase YP_001479750.1 3897830 D 399741 CDS YP_001479751.1 157371762 5605247 3898909..3899547 1 NC_009832.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3899547 purN 5605247 purN Serratia proteamaculans 568 phosphoribosylglycinamide formyltransferase YP_001479751.1 3898909 D 399741 CDS YP_001479752.1 157371763 5605248 complement(3899598..3899867) 1 NC_009832.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: csa:Csal_0195 plasmid stabilization system; addiction module antitoxin 3899867 5605248 Spro_3526 Serratia proteamaculans 568 addiction module antitoxin YP_001479752.1 3899598 R 399741 CDS YP_001479753.1 157371764 5605249 complement(3899871..3900065) 1 NC_009832.1 KEGG: pst:PSPTOA0058 hypothetical protein; hypothetical protein 3900065 5605249 Spro_3527 Serratia proteamaculans 568 hypothetical protein YP_001479753.1 3899871 R 399741 CDS YP_001479754.1 157371765 5605281 3900210..3900764 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ypi:YpsIP31758_1232 spermidine N(1)-acetyltransferase; GCN5-like N-acetyltransferase 3900764 5605281 Spro_3528 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479754.1 3900210 D 399741 CDS YP_001479755.1 157371766 5605283 complement(3902550..3902867) 1 NC_009832.1 PFAM: protein of unknown function DUF596; KEGG: pmu:PM1634 unknown; hypothetical protein 3902867 5605283 Spro_3531 Serratia proteamaculans 568 hypothetical protein YP_001479755.1 3902550 R 399741 CDS YP_001479756.1 157371767 5605298 complement(3902893..3903138) 1 NC_009832.1 KEGG: plu:plu3577 hypothetical protein; hypothetical protein 3903138 5605298 Spro_3532 Serratia proteamaculans 568 hypothetical protein YP_001479756.1 3902893 R 399741 CDS YP_001479757.1 157371768 5605299 complement(3903300..3903593) 1 NC_009832.1 PFAM: protein of unknown function DUF596; KEGG: xft:PD2117 hypothetical protein; hypothetical protein 3903593 5605299 Spro_3533 Serratia proteamaculans 568 hypothetical protein YP_001479757.1 3903300 R 399741 CDS YP_001479758.1 157371769 5605300 complement(3903807..3903986) 1 NC_009832.1 KEGG: xft:PD1240 hypothetical protein; hypothetical protein 3903986 5605300 Spro_3534 Serratia proteamaculans 568 hypothetical protein YP_001479758.1 3903807 R 399741 CDS YP_001479759.1 157371770 5605310 complement(3903999..3904295) 1 NC_009832.1 KEGG: plu:plu3577 hypothetical protein; hypothetical protein 3904295 5605310 Spro_3535 Serratia proteamaculans 568 hypothetical protein YP_001479759.1 3903999 R 399741 CDS YP_001479760.1 157371771 5605311 complement(3904457..3904819) 1 NC_009832.1 PFAM: protein of unknown function DUF596; KEGG: xft:PD1241 hypothetical protein; hypothetical protein 3904819 5605311 Spro_3536 Serratia proteamaculans 568 hypothetical protein YP_001479760.1 3904457 R 399741 CDS YP_001479761.1 157371772 5605312 complement(3904828..3905100) 1 NC_009832.1 KEGG: xft:PD2116 hemagglutinin-like secreted protein; hemagglutinin-like secreted protein 3905100 5605312 Spro_3537 Serratia proteamaculans 568 hemagglutinin-like secreted protein YP_001479761.1 3904828 R 399741 CDS YP_001479762.1 157371773 5605319 complement(3905184..3905996) 1 NC_009832.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3905996 5605319 Spro_3538 Serratia proteamaculans 568 phosphate transporter ATP-binding protein YP_001479762.1 3905184 R 399741 CDS YP_001479763.1 157371774 5605320 complement(3906025..3907677) 1 NC_009832.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2800 putative ABC phosphate transporter, permease subunit; phosphate ABC transporter inner membrane subunit PstA 3907677 5605320 Spro_3539 Serratia proteamaculans 568 phosphate ABC transporter inner membrane subunit PstA YP_001479763.1 3906025 R 399741 CDS YP_001479764.1 157371775 5605321 complement(3907674..3909848) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1228 phosphate ABC transporter, permease protein PstC; binding-protein-dependent transport systems inner membrane component 3909848 5605321 Spro_3540 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479764.1 3907674 R 399741 CDS YP_001479765.1 157371776 5605342 3910243..3912306 1 NC_009832.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3912306 5605342 Spro_3541 Serratia proteamaculans 568 polyphosphate kinase YP_001479765.1 3910243 D 399741 CDS YP_001479766.1 157371777 5605343 3912317..3913867 1 NC_009832.1 PFAM: Ppx/GppA phosphatase; KEGG: ypi:YpsIP31758_1226 exopolyphosphatase; exopolyphosphatase 3913867 5605343 Spro_3542 Serratia proteamaculans 568 exopolyphosphatase YP_001479766.1 3912317 D 399741 CDS YP_001479767.1 157371778 5605344 complement(3913901..3916153) 1 NC_009832.1 PFAM: EAL domain protein; SMART: GGDEF domain containing protein; KEGG: kpn:KPN_02828 putative cytochrome c-type biogenesis protein; diguanylate cyclase/phosphodiesterase 3916153 5605344 Spro_3543 Serratia proteamaculans 568 diguanylate cyclase/phosphodiesterase YP_001479767.1 3913901 R 399741 CDS YP_001479768.1 157371779 5605345 3916519..3916698 1 NC_009832.1 KEGG: ypi:YpsIP31758_1225 hypothetical protein; hypothetical protein 3916698 5605345 Spro_3544 Serratia proteamaculans 568 hypothetical protein YP_001479768.1 3916519 D 399741 CDS YP_001479769.1 157371780 5605346 3916889..3918322 1 NC_009832.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: yen:YE1117 putative divalent cation transport protein; magnesium transporter 3918322 5605346 Spro_3545 Serratia proteamaculans 568 magnesium transporter YP_001479769.1 3916889 D 399741 CDS YP_001479770.1 157371781 5605347 3918586..3918936 1 NC_009832.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ypi:YpsIP31758_3614 hypothetical protein; MuA-transposase/repressor protein CI DNA-binding 3918936 5605347 Spro_3546 Serratia proteamaculans 568 MuA-transposase/repressor protein CI DNA-binding YP_001479770.1 3918586 D 399741 CDS YP_001479771.1 157371782 5605351 complement(3918942..3920480) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: reh:H16_B2551 DNA-3-methyladenine glycosylase II, adenosine deaminase; AraC family transcriptional regulator 3920480 5605351 Spro_3547 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479771.1 3918942 R 399741 CDS YP_001479772.1 157371783 5605352 3920605..3921957 1 NC_009832.1 KEGG: yen:YE1115 putative heat shock protein; putative chaperone 3921957 5605352 Spro_3548 Serratia proteamaculans 568 putative chaperone YP_001479772.1 3920605 D 399741 CDS YP_001479773.1 157371784 5605353 3922006..3922569 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_0113 GCN5-related N-acetyltransferase; GCN5-like N-acetyltransferase 3922569 5605353 Spro_3549 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479773.1 3922006 D 399741 CDS YP_001479774.1 157371785 5605429 3922563..3923072 1 NC_009832.1 KEGG: asa:ASA_4263 predicted kinase; kinase 3923072 5605429 Spro_3550 Serratia proteamaculans 568 kinase YP_001479774.1 3922563 D 399741 CDS YP_001479775.1 157371786 5605430 complement(3923078..3924031) 1 NC_009832.1 PFAM: aldo/keto reductase; KEGG: eca:ECA3182 probable oxidoreductase; aldo/keto reductase 3924031 5605430 Spro_3551 Serratia proteamaculans 568 aldo/keto reductase YP_001479775.1 3923078 R 399741 CDS YP_001479776.1 157371787 5605431 3924302..3925543 1 NC_009832.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3925543 5605431 Spro_3552 Serratia proteamaculans 568 multidrug efflux system subunit MdtA YP_001479776.1 3924302 D 399741 CDS YP_001479777.1 157371788 5605455 3925543..3928662 1 NC_009832.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3928662 5605455 Spro_3553 Serratia proteamaculans 568 multidrug efflux system subunit MdtB YP_001479777.1 3925543 D 399741 CDS YP_001479778.1 157371789 5605456 3928659..3931739 1 NC_009832.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3931739 5605456 Spro_3554 Serratia proteamaculans 568 multidrug efflux system subunit MdtC YP_001479778.1 3928659 D 399741 CDS YP_001479779.1 157371790 5605457 3931750..3933183 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE1106 hypothetical protein; multidrug efflux system protein MdtE 3933183 5605457 Spro_3555 Serratia proteamaculans 568 multidrug efflux system protein MdtE YP_001479779.1 3931750 D 399741 CDS YP_001479780.1 157371791 5605470 3933180..3934562 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: yen:YE1105 two-component system, sensor kinase; signal transduction histidine-protein kinase BaeS 3934562 5605470 Spro_3556 Serratia proteamaculans 568 signal transduction histidine-protein kinase BaeS YP_001479780.1 3933180 D 399741 CDS YP_001479781.1 157371792 5605471 3934559..3935278 1 NC_009832.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3935278 5605471 Spro_3557 Serratia proteamaculans 568 DNA-binding transcriptional regulator BaeR YP_001479781.1 3934559 D 399741 CDS YP_001479782.1 157371793 5605472 complement(3935275..3935661) 1 NC_009832.1 PFAM: PilT protein domain protein; KEGG: hso:HS_1769 hypothetical protein; PilT domain-containing protein 3935661 5605472 Spro_3558 Serratia proteamaculans 568 PilT domain-containing protein YP_001479782.1 3935275 R 399741 CDS YP_001479783.1 157371794 5605488 complement(3935664..3935927) 1 NC_009832.1 PFAM: SpoVT/AbrB domain protein; KEGG: apl:APL_0666 hypothetical protein; SpoVT/AbrB domain-containing protein 3935927 5605488 Spro_3559 Serratia proteamaculans 568 SpoVT/AbrB domain-containing protein YP_001479783.1 3935664 R 399741 CDS YP_001479784.1 157371795 5605489 3936280..3936618 1 NC_009832.1 PFAM: protein of unknown function DUF1508; KEGG: ypi:YpsIP31758_1209 hypothetical protein; hypothetical protein 3936618 5605489 Spro_3560 Serratia proteamaculans 568 hypothetical protein YP_001479784.1 3936280 D 399741 CDS YP_001479785.1 157371796 5605490 3936797..3938149 1 NC_009832.1 PFAM: peptidase U32; KEGG: yen:YE1100 putative protease; peptidase U32 3938149 5605490 Spro_3561 Serratia proteamaculans 568 peptidase U32 YP_001479785.1 3936797 D 399741 CDS YP_001479786.1 157371797 5605491 3938636..3939553 1 NC_009832.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 3939553 5605491 Spro_3562 Serratia proteamaculans 568 lipid kinase YP_001479786.1 3938636 D 399741 CDS YP_001479787.1 157371798 5605492 3939735..3940949 1 NC_009832.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0917 putative starvation sensing mandelate racemase / muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 3940949 5605492 Spro_3563 Serratia proteamaculans 568 mandelate racemase/muconate lactonizing protein YP_001479787.1 3939735 D 399741 CDS YP_001479788.1 157371799 5605493 3940937..3941980 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kpn:KPN_03621 putative dehydrogenase, NAD(P)-binding, starvation-sensing protein; alcohol dehydrogenase 3941980 5605493 Spro_3564 Serratia proteamaculans 568 alcohol dehydrogenase YP_001479788.1 3940937 D 399741 CDS YP_001479789.1 157371800 5605497 3942069..3943358 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03622 putative transport protein; major facilitator transporter 3943358 5605497 Spro_3565 Serratia proteamaculans 568 major facilitator transporter YP_001479789.1 3942069 D 399741 CDS YP_001479790.1 157371801 5605498 3943417..3944889 1 NC_009832.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eca:ECA0920 probable carbohydrate oxidoreductase; mannitol dehydrogenase domain-containing protein 3944889 5605498 Spro_3566 Serratia proteamaculans 568 mannitol dehydrogenase domain-containing protein YP_001479790.1 3943417 D 399741 CDS YP_001479791.1 157371802 5605499 3945017..3945703 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: eca:ECA0921 GntR-family transcriptional regulator; GntR family transcriptional regulator 3945703 5605499 Spro_3567 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001479791.1 3945017 D 399741 CDS YP_001479792.1 157371803 5605503 3945918..3946967 1 NC_009832.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; fructose-bisphosphate aldolase 3946967 5605503 Spro_3568 Serratia proteamaculans 568 fructose-bisphosphate aldolase YP_001479792.1 3945918 D 399741 CDS YP_001479793.1 157371804 5605504 3947234..3947782 1 NC_009832.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; KEGG: yen:YE1098 PTS system, glucitol/sorbitol-specific IIC2 component; PTS system glucitol/sorbitol-specific transporter subunit IIC 3947782 5605504 Spro_3569 Serratia proteamaculans 568 PTS system glucitol/sorbitol-specific transporter subunit IIC YP_001479793.1 3947234 D 399741 CDS YP_001479794.1 157371805 5605505 3947798..3948778 1 NC_009832.1 KEGG: yen:YE1097 PTS system, glucitol/sorbitol-specific IIBC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; PFAM: Sorbitol phosphotransferase protein II domain protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC 3948778 5605505 Spro_3570 Serratia proteamaculans 568 PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_001479794.1 3947798 D 399741 CDS YP_001479795.1 157371806 5605524 3948801..3949163 1 NC_009832.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucitol/sorbitol-specific transporter subunit IIA 3949163 5605524 Spro_3571 Serratia proteamaculans 568 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_001479795.1 3948801 D 399741 CDS YP_001479796.1 157371807 5605525 3949174..3949953 1 NC_009832.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase 3949953 5605525 Spro_3572 Serratia proteamaculans 568 sorbitol-6-phosphate dehydrogenase YP_001479796.1 3949174 D 399741 CDS YP_001479797.1 157371808 5605526 3950005..3950361 1 NC_009832.1 regulator for glucitol utilization; DNA-binding transcriptional activator GutM 3950361 5605526 Spro_3573 Serratia proteamaculans 568 DNA-binding transcriptional activator GutM YP_001479797.1 3950005 D 399741 CDS YP_001479798.1 157371809 5605543 3950445..3951218 1 NC_009832.1 regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR 3951218 srlR 5605543 srlR Serratia proteamaculans 568 DNA-binding transcriptional repressor SrlR YP_001479798.1 3950445 D 399741 CDS YP_001479799.1 157371810 5605544 3951211..3952182 1 NC_009832.1 catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase 3952182 gutQ 5605544 gutQ Serratia proteamaculans 568 D-arabinose 5-phosphate isomerase YP_001479799.1 3951211 D 399741 CDS YP_001479800.1 157371811 5605545 complement(3952243..3952701) 1 NC_009832.1 PFAM: Inhibitor of vertebrate lysozyme; KEGG: yps:YPTB2822 hypothetical protein; inhibitor of vertebrate lysozyme 3952701 5605545 Spro_3576 Serratia proteamaculans 568 inhibitor of vertebrate lysozyme YP_001479800.1 3952243 R 399741 CDS YP_001479801.1 157371812 5605593 complement(3952788..3953588) 1 NC_009832.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 3953588 5605593 Spro_3577 Serratia proteamaculans 568 phosphomethylpyrimidine kinase YP_001479801.1 3952788 R 399741 CDS YP_001479802.1 157371813 5605594 complement(3953585..3954379) 1 NC_009832.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 3954379 5605594 Spro_3578 Serratia proteamaculans 568 hydroxyethylthiazole kinase YP_001479802.1 3953585 R 399741 CDS YP_001479803.1 157371814 5605595 3954575..3955000 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE1087 putative acetyltransferase; GCN5-like N-acetyltransferase 3955000 5605595 Spro_3579 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479803.1 3954575 D 399741 CDS YP_001479804.1 157371815 5605599 complement(3955042..3956307) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW3845 predicted transporter; major facilitator transporter 3956307 5605599 Spro_3580 Serratia proteamaculans 568 major facilitator transporter YP_001479804.1 3955042 R 399741 CDS YP_001479805.1 157371816 5605600 complement(3956415..3957392) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ecs:ECs4795 hypothetical protein; xylose isomerase domain-containing protein 3957392 5605600 Spro_3581 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001479805.1 3956415 R 399741 CDS YP_001479806.1 157371817 5605601 complement(3957402..3958109) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: ecs:ECs4794 putative transcriptional regulator; GntR family transcriptional regulator 3958109 5605601 Spro_3582 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001479806.1 3957402 R 399741 CDS YP_001479807.1 157371818 5605691 complement(3958225..3959460) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0370 hypothetical protein; major facilitator transporter 3959460 5605691 Spro_3583 Serratia proteamaculans 568 major facilitator transporter YP_001479807.1 3958225 R 399741 CDS YP_001479808.1 157371819 5605692 3959556..3960005 1 NC_009832.1 PFAM: helix-turn-helix HxlR type; KEGG: pfl:PFL_3943 hypothetical protein; HxlR family transcriptional regulator 3960005 5605692 Spro_3584 Serratia proteamaculans 568 HxlR family transcriptional regulator YP_001479808.1 3959556 D 399741 CDS YP_001479809.1 157371820 5605693 complement(3960036..3960344) 1 NC_009832.1 PFAM: Fels-1 Propage domain protein; KEGG: bpd:BURPS668_1560 putative prophage protein; Fels-1 Propage domain-containing protein 3960344 5605693 Spro_3585 Serratia proteamaculans 568 Fels-1 Propage domain-containing protein YP_001479809.1 3960036 R 399741 CDS YP_001479810.1 157371821 5605699 3960543..3961343 1 NC_009832.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: ypi:YpsIP31758_2990 RNA pseudouridine synthase family protein; pseudouridine synthase 3961343 5605699 Spro_3586 Serratia proteamaculans 568 pseudouridine synthase YP_001479810.1 3960543 D 399741 CDS YP_001479811.1 157371822 5605700 complement(3961366..3964401) 1 NC_009832.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: psp:PSPPH_0790 autotransporter, putative; outer membrane autotransporter 3964401 5605700 Spro_3587 Serratia proteamaculans 568 outer membrane autotransporter YP_001479811.1 3961366 R 399741 CDS YP_001479812.1 157371823 5605701 complement(3964620..3964934) 1 NC_009832.1 KEGG: bam:Bamb_5719 hypothetical protein; hypothetical protein 3964934 5605701 Spro_3588 Serratia proteamaculans 568 hypothetical protein YP_001479812.1 3964620 R 399741 CDS YP_001479813.1 157371824 5605760 3965112..3965744 1 NC_009832.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: reh:H16_B0523 response regulator, NarL-family; two component LuxR family transcriptional regulator 3965744 5605760 Spro_3589 Serratia proteamaculans 568 two component LuxR family transcriptional regulator YP_001479813.1 3965112 D 399741 CDS YP_001479814.1 157371825 5605761 3965741..3967525 1 NC_009832.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: reh:H16_B0524 signal transduction histidine kinase containing a receiver domain (hybrid); integral membrane sensor hybrid histidine kinase 3967525 5605761 Spro_3590 Serratia proteamaculans 568 integral membrane sensor hybrid histidine kinase YP_001479814.1 3965741 D 399741 CDS YP_001479815.1 157371826 5605762 complement(3967602..3968435) 1 NC_009832.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sma:SAV492 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 3968435 5605762 Spro_3591 Serratia proteamaculans 568 enoyl-CoA hydratase/isomerase YP_001479815.1 3967602 R 399741 CDS YP_001479816.1 157371827 5605763 3968562..3968936 1 NC_009832.1 PFAM: helix-turn-helix HxlR type; KEGG: sma:SAV491 transcriptional regulator; HxlR family transcriptional regulator 3968936 5605763 Spro_3592 Serratia proteamaculans 568 HxlR family transcriptional regulator YP_001479816.1 3968562 D 399741 CDS YP_001479817.1 157371828 5605764 complement(3968948..3969487) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2338 probable ribosomal-protein-alanine N-acetyltransferase; GCN5-like N-acetyltransferase 3969487 5605764 Spro_3593 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479817.1 3968948 R 399741 CDS YP_001479818.1 157371829 5605765 complement(3969571..3970752) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_3182 major facilitator superfamily MFS_1; major facilitator transporter 3970752 5605765 Spro_3594 Serratia proteamaculans 568 major facilitator transporter YP_001479818.1 3969571 R 399741 CDS YP_001479819.1 157371830 5605783 complement(3970951..3972528) 1 NC_009832.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3972528 guaA 5605783 guaA Serratia proteamaculans 568 GMP synthase YP_001479819.1 3970951 R 399741 CDS YP_001479820.1 157371831 5605784 complement(3972630..3974093) 1 NC_009832.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3974093 5605784 Spro_3596 Serratia proteamaculans 568 inosine 5'-monophosphate dehydrogenase YP_001479820.1 3972630 R 399741 CDS YP_001479821.1 157371832 5605785 3974264..3975640 1 NC_009832.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3975640 xseA 5605785 xseA Serratia proteamaculans 568 exodeoxyribonuclease VII large subunit YP_001479821.1 3974264 D 399741 CDS YP_001479822.1 157371833 5605815 complement(3975647..3978019) 1 NC_009832.1 PFAM: glycoside hydrolase family 31; KEGG: ypi:YpsIP31758_0924 glycosyl hydrolase, family 31 protein; alpha-glucosidase 3978019 5605815 Spro_3598 Serratia proteamaculans 568 alpha-glucosidase YP_001479822.1 3975647 R 399741 CDS YP_001479823.1 157371834 5605816 complement(3978025..3979332) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_0926 putative hexuronate transporter; major facilitator transporter 3979332 5605816 Spro_3599 Serratia proteamaculans 568 major facilitator transporter YP_001479823.1 3978025 R 399741 CDS YP_001479824.1 157371835 5605817 3979698..3980780 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_0927 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 3980780 5605817 Spro_3600 Serratia proteamaculans 568 LacI family transcription regulator YP_001479824.1 3979698 D 399741 CDS YP_001479825.1 157371836 5605848 3980822..3981847 1 NC_009832.1 PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: eca:ECA3211 extracellular metalloprotease; peptidase M4 thermolysin 3981847 5605848 Spro_3601 Serratia proteamaculans 568 peptidase M4 thermolysin YP_001479825.1 3980822 D 399741 CDS YP_001479826.1 157371837 5605849 3981847..3982188 1 NC_009832.1 KEGG: eca:ECA3212 hypothetical protein; hypothetical protein 3982188 5605849 Spro_3602 Serratia proteamaculans 568 hypothetical protein YP_001479826.1 3981847 D 399741 CDS YP_001479827.1 157371838 5605850 complement(3982193..3982414) 1 NC_009832.1 PFAM: protein of unknown function DUF1407; KEGG: yen:YE1079 hypothetical protein; hypothetical protein 3982414 5605850 Spro_3603 Serratia proteamaculans 568 hypothetical protein YP_001479827.1 3982193 R 399741 CDS YP_001479828.1 157371839 5605854 complement(3982428..3983384) 1 NC_009832.1 PFAM: Auxin Efflux Carrier; KEGG: yen:YE1078 hypothetical protein; auxin efflux carrier 3983384 5605854 Spro_3604 Serratia proteamaculans 568 auxin efflux carrier YP_001479828.1 3982428 R 399741 CDS YP_001479829.1 157371840 5605855 complement(3983487..3984971) 1 NC_009832.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3984971 engA 5605855 engA Serratia proteamaculans 568 GTP-binding protein EngA YP_001479829.1 3983487 R 399741 CDS YP_001479830.1 157371841 5605856 complement(3985102..3986283) 1 NC_009832.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 3986283 5605856 Spro_3606 Serratia proteamaculans 568 outer membrane protein assembly complex subunit YfgL YP_001479830.1 3985102 R 399741 CDS YP_001479831.1 157371842 5605857 complement(3986295..3986915) 1 NC_009832.1 KEGG: yen:YE1075 hypothetical protein; hypothetical protein 3986915 5605857 Spro_3607 Serratia proteamaculans 568 hypothetical protein YP_001479831.1 3986295 R 399741 CDS YP_001479832.1 157371843 5605858 complement(3986929..3988203) 1 NC_009832.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3988203 hisS 5605858 hisS Serratia proteamaculans 568 histidyl-tRNA synthetase YP_001479832.1 3986929 R 399741 CDS YP_001479833.1 157371844 5605859 complement(3988342..3989463) 1 NC_009832.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3989463 ispG 5605859 ispG Serratia proteamaculans 568 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001479833.1 3988342 R 399741 CDS YP_001479834.1 157371845 5605863 complement(3989511..3990482) 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: ecv:APECO1_4008 hypothetical protein; cytoskeletal protein RodZ 3990482 5605863 Spro_3610 Serratia proteamaculans 568 cytoskeletal protein RodZ YP_001479834.1 3989511 R 399741 CDS YP_001479835.1 157371846 5605864 complement(3990472..3991263) 1 NC_009832.1 KEGG: yen:YE1071 putative fimbrial biogenesis protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 3991263 5605864 Spro_3611 Serratia proteamaculans 568 type IV pilus biogenesis/stability protein PilW YP_001479835.1 3990472 R 399741 CDS YP_001479836.1 157371847 5605865 complement(3991309..3992505) 1 NC_009832.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 3992505 5605865 Spro_3612 Serratia proteamaculans 568 ribosomal RNA large subunit methyltransferase N YP_001479836.1 3991309 R 399741 CDS YP_001479837.1 157371848 5605889 complement(3992804..3993229) 1 NC_009832.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3993229 ndk 5605889 ndk Serratia proteamaculans 568 nucleoside diphosphate kinase YP_001479837.1 3992804 R 399741 CDS YP_001479838.1 157371849 5605890 complement(3993411..3995735) 1 NC_009832.1 penicillin-insensitive transglycosylase/transpeptidase; penicillin-binding protein 1C 3995735 5605890 Spro_3614 Serratia proteamaculans 568 penicillin-binding protein 1C YP_001479838.1 3993411 R 399741 CDS YP_001479839.1 157371850 5605891 complement(3995797..4000788) 1 NC_009832.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: yen:YE1066 hypothetical protein; alpha-2-macroglobulin domain-containing protein 4000788 5605891 Spro_3615 Serratia proteamaculans 568 alpha-2-macroglobulin domain-containing protein YP_001479839.1 3995797 R 399741 CDS YP_001479840.1 157371851 5605926 4000940..4001977 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_1855 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 4001977 5605926 Spro_3616 Serratia proteamaculans 568 LacI family transcription regulator YP_001479840.1 4000940 D 399741 CDS YP_001479841.1 157371852 5605927 4002101..4003540 1 NC_009832.1 PFAM: Na+/H+ antiporter NhaC; KEGG: ypi:YpsIP31758_1856 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 4003540 5605927 Spro_3617 Serratia proteamaculans 568 Na+/H+ antiporter NhaC YP_001479841.1 4002101 D 399741 CDS YP_001479842.1 157371853 5605928 4003542..4004720 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: ypi:YpsIP31758_1857 aminotransferase, classes I and II; class I and II aminotransferase 4004720 5605928 Spro_3618 Serratia proteamaculans 568 class I and II aminotransferase YP_001479842.1 4003542 D 399741 CDS YP_001479843.1 157371854 5605943 complement(4005300..4006130) 1 NC_009832.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 4006130 5605943 Spro_3619 Serratia proteamaculans 568 enhanced serine sensitivity protein SseB YP_001479843.1 4005300 R 399741 CDS YP_001479844.1 157371855 5605944 complement(4006419..4007714) 1 NC_009832.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 4007714 5605944 Spro_3620 Serratia proteamaculans 568 aminopeptidase B YP_001479844.1 4006419 R 399741 CDS YP_001479845.1 157371856 5605945 complement(4007953..4008153) 1 NC_009832.1 PFAM: protein of unknown function DUF528; KEGG: ecp:ECP_2529 hypothetical protein YfhJ; hypothetical protein 4008153 5605945 Spro_3621 Serratia proteamaculans 568 hypothetical protein YP_001479845.1 4007953 R 399741 CDS YP_001479846.1 157371857 5605946 complement(4008167..4008502) 1 NC_009832.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: plu:plu3278 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S type, ISC system 4008502 5605946 Spro_3622 Serratia proteamaculans 568 ferredoxin, 2Fe-2S type, ISC system YP_001479846.1 4008167 R 399741 CDS YP_001479847.1 157371858 5605947 complement(4008505..4010355) 1 NC_009832.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 4010355 hscA 5605947 hscA Serratia proteamaculans 568 chaperone protein HscA YP_001479847.1 4008505 R 399741 CDS YP_001479848.1 157371859 5605948 complement(4010383..4010904) 1 NC_009832.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 4010904 hscB 5605948 hscB Serratia proteamaculans 568 co-chaperone HscB YP_001479848.1 4010383 R 399741 CDS YP_001479849.1 157371860 5606010 complement(4010968..4011291) 1 NC_009832.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 4011291 iscA 5606010 iscA Serratia proteamaculans 568 iron-sulfur cluster assembly protein YP_001479849.1 4010968 R 399741 CDS YP_001479850.1 157371861 5606011 complement(4011347..4011733) 1 NC_009832.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: ypi:YpsIP31758_1169 FeS cluster assembly scaffold IscU; scaffold protein 4011733 5606011 Spro_3626 Serratia proteamaculans 568 scaffold protein YP_001479850.1 4011347 R 399741 CDS YP_001479851.1 157371862 5606012 complement(4011758..4012972) 1 NC_009832.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 4012972 5606012 Spro_3627 Serratia proteamaculans 568 cysteine desulfurase YP_001479851.1 4011758 R 399741 CDS YP_001479852.1 157371863 5606030 complement(4013027..4013521) 1 NC_009832.1 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 4013521 5606030 Spro_3628 Serratia proteamaculans 568 DNA-binding transcriptional regulator IscR YP_001479852.1 4013027 R 399741 CDS YP_001479853.1 157371864 5606031 complement(4013716..4014450) 1 NC_009832.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: ypi:YpsIP31758_1166 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase 4014450 5606031 Spro_3629 Serratia proteamaculans 568 RNA methyltransferase YP_001479853.1 4013716 R 399741 CDS YP_001479854.1 157371865 5606032 4014570..4015373 1 NC_009832.1 PFAM: inositol monophosphatase; KEGG: ypi:YpsIP31758_1165 inositol-1-monophosphatase; inositol monophosphatase 4015373 5606032 Spro_3630 Serratia proteamaculans 568 inositol monophosphatase YP_001479854.1 4014570 D 399741 CDS YP_001479855.1 157371866 5606050 complement(4015438..4016460) 1 NC_009832.1 PFAM: high-affinity nickel-transporter; KEGG: yen:YE1052 hypothetical protein; high-affinity nickel-transporter 4016460 5606050 Spro_3631 Serratia proteamaculans 568 high-affinity nickel-transporter YP_001479855.1 4015438 R 399741 CDS YP_001479856.1 157371867 5606051 complement(4016451..4017119) 1 NC_009832.1 PFAM: protein of unknown function DUF1007; KEGG: yen:YE1051 hypothetical protein; hypothetical protein 4017119 5606051 Spro_3632 Serratia proteamaculans 568 hypothetical protein YP_001479856.1 4016451 R 399741 CDS YP_001479857.1 157371868 5606052 4017264..4018529 1 NC_009832.1 PFAM: PRD domain protein; KEGG: ypa:YPA_2343 putative RNA-binding protein; stationary phase inducible protein CsiE 4018529 5606052 Spro_3633 Serratia proteamaculans 568 stationary phase inducible protein CsiE YP_001479857.1 4017264 D 399741 CDS YP_001479858.1 157371869 5606056 complement(4018526..4019677) 1 NC_009832.1 putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; putative 3-phenylpropionic acid transporter 4019677 5606056 Spro_3634 Serratia proteamaculans 568 putative 3-phenylpropionic acid transporter YP_001479858.1 4018526 R 399741 CDS YP_001479859.1 157371870 5606057 complement(4019832..4020260) 1 NC_009832.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: amt:Amet_3027 cytidine deaminase; cytidine deaminase 4020260 5606057 Spro_3635 Serratia proteamaculans 568 cytidine deaminase YP_001479859.1 4019832 R 399741 CDS YP_001479860.1 157371871 5606058 complement(4020262..4021005) 1 NC_009832.1 PFAM: protein of unknown function DUF1355; KEGG: stm:STM1381 putative cytoplasmic protein; hypothetical protein 4021005 5606058 Spro_3636 Serratia proteamaculans 568 hypothetical protein YP_001479860.1 4020262 R 399741 CDS YP_001479861.1 157371872 5606082 complement(4021081..4022265) 1 NC_009832.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: ent:Ent638_2927 nucleoside transporter; Na+ dependent nucleoside transporter 4022265 5606082 Spro_3637 Serratia proteamaculans 568 Na+ dependent nucleoside transporter YP_001479861.1 4021081 R 399741 CDS YP_001479862.1 157371873 5606083 complement(4022546..4023799) 1 NC_009832.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 4023799 glyA 5606083 glyA Serratia proteamaculans 568 serine hydroxymethyltransferase YP_001479862.1 4022546 R 399741 CDS YP_001479863.1 157371874 5606084 4024172..4025362 1 NC_009832.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 4025362 5606084 Spro_3639 Serratia proteamaculans 568 nitric oxide dioxygenase YP_001479863.1 4024172 D 399741 CDS YP_001479864.1 157371875 5606100 complement(4025527..4026714) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: asa:ASA_2963 cytochrome c, class I; gluconate 2-dehydrogenase 4026714 5606100 Spro_3640 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001479864.1 4025527 R 399741 CDS YP_001479865.1 157371876 5606101 complement(4026711..4028621) 1 NC_009832.1 KEGG: aha:AHA_2947 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 4028621 5606101 Spro_3641 Serratia proteamaculans 568 twin-arginine translocation pathway signal YP_001479865.1 4026711 R 399741 CDS YP_001479866.1 157371877 5606102 complement(4028844..4030268) 1 NC_009832.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 4030268 5606102 Spro_3642 Serratia proteamaculans 568 gamma-aminobutyraldehyde dehydrogenase YP_001479866.1 4028844 R 399741 CDS YP_001479867.1 157371878 5606115 complement(4030320..4031126) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfo:Pfl_1045 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4031126 5606115 Spro_3643 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479867.1 4030320 R 399741 CDS YP_001479868.1 157371879 5606116 complement(4031116..4032060) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pen:PSEEN1240 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 4032060 5606116 Spro_3644 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001479868.1 4031116 R 399741 CDS YP_001479869.1 157371880 5606117 complement(4032062..4033090) 1 NC_009832.1 KEGG: pfo:Pfl_1047 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 4033090 5606117 Spro_3645 Serratia proteamaculans 568 spermidine/putrescine ABC transporter ATPase YP_001479869.1 4032062 R 399741 CDS YP_001479870.1 157371881 5606145 complement(4033145..4034299) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: ssn:SSON_1697 putative transport protein; extracellular solute-binding protein 4034299 5606145 Spro_3646 Serratia proteamaculans 568 extracellular solute-binding protein YP_001479870.1 4033145 R 399741 CDS YP_001479871.1 157371882 5606146 complement(4034362..4035825) 1 NC_009832.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 4035825 5606146 Spro_3647 Serratia proteamaculans 568 gamma-aminobutyraldehyde dehydrogenase YP_001479871.1 4034362 R 399741 CDS YP_001479872.1 157371883 5606147 complement(4035941..4036864) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1050 transcriptional regulator, LysR family; LysR family transcriptional regulator 4036864 5606147 Spro_3648 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479872.1 4035941 R 399741 CDS YP_001479873.1 157371884 5606192 complement(4037086..4037424) 1 NC_009832.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 4037424 5606192 Spro_3649 Serratia proteamaculans 568 nitrogen regulatory protein P-II 1 YP_001479873.1 4037086 R 399741 CDS YP_001479874.1 157371885 5606193 complement(4037435..4039057) 1 NC_009832.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4039057 5606193 Spro_3650 Serratia proteamaculans 568 NAD synthetase YP_001479874.1 4037435 R 399741 CDS YP_001479875.1 157371886 5606194 complement(4039187..4040524) 1 NC_009832.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; KEGG: yen:YE1037 two-component system response regulator; two component sigma54 specific Fis family transcriptional regulator 4040524 5606194 Spro_3651 Serratia proteamaculans 568 two component sigma54 specific Fis family transcriptional regulator YP_001479875.1 4039187 R 399741 CDS YP_001479876.1 157371887 5606210 complement(4040521..4041393) 1 NC_009832.1 KEGG: ypp:YPDSF_2259 lipoprotein; hypothetical protein 4041393 5606210 Spro_3652 Serratia proteamaculans 568 hypothetical protein YP_001479876.1 4040521 R 399741 CDS YP_001479877.1 157371888 5606211 complement(4041396..4042832) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ypi:YpsIP31758_1150 putative sensor-like histidine kinase YfhK; integral membrane sensor signal transduction histidine kinase 4042832 5606211 Spro_3653 Serratia proteamaculans 568 integral membrane sensor signal transduction histidine kinase YP_001479877.1 4041396 R 399741 CDS YP_001479878.1 157371889 5606212 complement(4043632..4047522) 1 NC_009832.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 4047522 5606212 Spro_3654 Serratia proteamaculans 568 phosphoribosylformylglycinamidine synthase YP_001479878.1 4043632 R 399741 CDS YP_001479879.1 157371890 5606289 4047781..4049262 1 NC_009832.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 4049262 5606289 Spro_3655 Serratia proteamaculans 568 putative transglycosylase YP_001479879.1 4047781 D 399741 CDS YP_001479880.1 157371891 5606290 complement(4049263..4049775) 1 NC_009832.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: ypi:YpsIP31758_1145 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase 4049775 5606290 Spro_3656 Serratia proteamaculans 568 zinc-binding CMP/dCMP deaminase YP_001479880.1 4049263 R 399741 CDS YP_001479881.1 157371892 5606291 4049959..4051011 1 NC_009832.1 KEGG: yen:YE1029 putative integral membrane protein; putative integral membrane protein 4051011 5606291 Spro_3657 Serratia proteamaculans 568 putative integral membrane protein YP_001479881.1 4049959 D 399741 CDS YP_001479882.1 157371893 5606307 4051159..4052310 1 NC_009832.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ent:Ent638_0142 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4052310 5606307 Spro_3658 Serratia proteamaculans 568 iron-containing alcohol dehydrogenase YP_001479882.1 4051159 D 399741 CDS YP_001479883.1 157371894 5606308 complement(4052498..4053154) 1 NC_009832.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: ypi:YpsIP31758_1144 HAD hydrolase YfhB; hypothetical protein 4053154 5606308 Spro_3659 Serratia proteamaculans 568 hypothetical protein YP_001479883.1 4052498 R 399741 CDS YP_001479884.1 157371895 5606309 complement(4053158..4054525) 1 NC_009832.1 PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: ent:Ent638_3046 phosphotransferase system, EIIC; phosphotransferase system EIIC 4054525 5606309 Spro_3660 Serratia proteamaculans 568 phosphotransferase system EIIC YP_001479884.1 4053158 R 399741 CDS YP_001479885.1 157371896 5606380 complement(4054545..4055438) 1 NC_009832.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 4055438 murQ 5606380 murQ Serratia proteamaculans 568 N-acetylmuramic acid-6-phosphate etherase YP_001479885.1 4054545 R 399741 CDS YP_001479886.1 157371897 5606381 4055613..4056461 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE1025 putative RpiR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 4056461 5606381 Spro_3662 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001479886.1 4055613 D 399741 CDS YP_001479887.1 157371898 5606382 4056597..4058135 1 NC_009832.1 PFAM: sulfatase; KEGG: asu:Asuc_1041 sulfatase; sulfatase 4058135 5606382 Spro_3663 Serratia proteamaculans 568 sulfatase YP_001479887.1 4056597 D 399741 CDS YP_001479888.1 157371899 5606403 4058244..4058504 1 NC_009832.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ecv:APECO1_3969 putative 4Fe-4S cluster-containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4058504 5606403 Spro_3664 Serratia proteamaculans 568 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001479888.1 4058244 D 399741 CDS YP_001479889.1 157371900 5606404 complement(4058569..4058949) 1 NC_009832.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 4058949 acpS 5606404 acpS Serratia proteamaculans 568 4'-phosphopantetheinyl transferase YP_001479889.1 4058569 R 399741 CDS YP_001479890.1 157371901 5606405 complement(4058949..4059680) 1 NC_009832.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 4059680 5606405 Spro_3666 Serratia proteamaculans 568 pyridoxine 5'-phosphate synthase YP_001479890.1 4058949 R 399741 CDS YP_001479891.1 157371902 5606412 complement(4059754..4060485) 1 NC_009832.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 4060485 recO 5606412 recO Serratia proteamaculans 568 DNA repair protein RecO YP_001479891.1 4059754 R 399741 CDS YP_001479892.1 157371903 5606413 complement(4060494..4061402) 1 NC_009832.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 4061402 era 5606413 era Serratia proteamaculans 568 GTP-binding protein Era YP_001479892.1 4060494 R 399741 CDS YP_001479893.1 157371904 5606414 complement(4061399..4062079) 1 NC_009832.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 4062079 rnc 5606414 rnc Serratia proteamaculans 568 ribonuclease III YP_001479893.1 4061399 R 399741 CDS YP_001479894.1 157371905 5606479 complement(4062262..4063239) 1 NC_009832.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 4063239 5606479 Spro_3670 Serratia proteamaculans 568 signal peptidase I YP_001479894.1 4062262 R 399741 CDS YP_001479895.1 157371906 5606480 complement(4063276..4065072) 1 NC_009832.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 4065072 5606480 Spro_3671 Serratia proteamaculans 568 GTP-binding protein LepA YP_001479895.1 4063276 R 399741 CDS YP_001479896.1 157371907 5606481 4065615..4066454 1 NC_009832.1 KEGG: yen:YE1014 hypothetical protein; hypothetical protein 4066454 5606481 Spro_3672 Serratia proteamaculans 568 hypothetical protein YP_001479896.1 4065615 D 399741 CDS YP_001479897.1 157371908 5606493 complement(4066451..4066924) 1 NC_009832.1 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 4066924 5606493 Spro_3673 Serratia proteamaculans 568 SoxR reducing system protein RseC YP_001479897.1 4066451 R 399741 CDS YP_001479898.1 157371909 5606494 complement(4066924..4067883) 1 NC_009832.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 4067883 rseB 5606494 rseB Serratia proteamaculans 568 periplasmic negative regulator of sigmaE YP_001479898.1 4066924 R 399741 CDS YP_001479899.1 157371910 5606495 complement(4067883..4068536) 1 NC_009832.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: ypi:YpsIP31758_1130 sigma E factor negative regulatory protein; anti-RNA polymerase sigma factor SigE 4068536 5606495 Spro_3675 Serratia proteamaculans 568 anti-RNA polymerase sigma factor SigE YP_001479899.1 4067883 R 399741 CDS YP_001479900.1 157371911 5606708 complement(4068567..4069142) 1 NC_009832.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 4069142 5606708 Spro_3676 Serratia proteamaculans 568 RNA polymerase sigma factor RpoE YP_001479900.1 4068567 R 399741 CDS YP_001479901.1 157371912 5606709 4069320..4070957 1 NC_009832.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 4070957 5606709 Spro_3677 Serratia proteamaculans 568 L-aspartate oxidase YP_001479901.1 4069320 D 399741 CDS YP_001479902.1 157371913 5606710 complement(4070998..4071780) 1 NC_009832.1 PFAM: methyltransferase small; KEGG: yps:YPTB2899 hypothetical protein; methyltransferase small 4071780 5606710 Spro_3678 Serratia proteamaculans 568 methyltransferase small YP_001479902.1 4070998 R 399741 CDS YP_001479903.1 157371914 5606711 4071880..4073205 1 NC_009832.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 4073205 5606711 Spro_3679 Serratia proteamaculans 568 ATP-dependent RNA helicase SrmB YP_001479903.1 4071880 D 399741 CDS YP_001479904.1 157371915 5606712 complement(4073266..4074021) 1 NC_009832.1 PFAM: Ankyrin; KEGG: yen:YE1006 putative phospholipase A accessory protein; ankyrin 4074021 5606712 Spro_3680 Serratia proteamaculans 568 ankyrin YP_001479904.1 4073266 R 399741 CDS YP_001479905.1 157371916 5606713 complement(4074014..4074976) 1 NC_009832.1 KEGG: yen:YE1005 phospholipase A; phospholipase A(1) 4074976 5606713 Spro_3681 Serratia proteamaculans 568 phospholipase A(1) YP_001479905.1 4074014 R 399741 CDS YP_001479906.1 157371917 5606928 complement(4075163..4075546) 1 NC_009832.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 4075546 5606928 Spro_3682 Serratia proteamaculans 568 autonomous glycyl radical cofactor GrcA YP_001479906.1 4075163 R 399741 CDS YP_001479907.1 157371918 5606929 4075891..4076574 1 NC_009832.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 4076574 5606929 Spro_3683 Serratia proteamaculans 568 uracil-DNA glycosylase YP_001479907.1 4075891 D 399741 CDS YP_001479908.1 157371919 5606930 complement(4076625..4077197) 1 NC_009832.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 4077197 5606930 Spro_3684 Serratia proteamaculans 568 heat shock protein GrpE YP_001479908.1 4076625 R 399741 CDS YP_001479909.1 157371920 5606970 4077322..4078200 1 NC_009832.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 4078200 ppnK 5606970 ppnK Serratia proteamaculans 568 inorganic polyphosphate/ATP-NAD kinase YP_001479909.1 4077322 D 399741 CDS YP_001479910.1 157371921 5606971 4078287..4079948 1 NC_009832.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: ypi:YpsIP31758_2889 DNA repair protein RecN; recombination and repair protein 4079948 5606971 Spro_3686 Serratia proteamaculans 568 recombination and repair protein YP_001479910.1 4078287 D 399741 CDS YP_001479911.1 157371922 5606972 4080062..4080400 1 NC_009832.1 PFAM: SmpA/OmlA domain protein; KEGG: stm:STM2685 small membrane protein A; hypothetical protein 4080400 5606972 Spro_3687 Serratia proteamaculans 568 hypothetical protein YP_001479911.1 4080062 D 399741 CDS YP_001479912.1 157371923 5606973 complement(4080515..4080799) 1 NC_009832.1 PFAM: protein of unknown function UPF0125; KEGG: ypi:YpsIP31758_2891 hypothetical protein; hypothetical protein 4080799 5606973 Spro_3688 Serratia proteamaculans 568 hypothetical protein YP_001479912.1 4080515 R 399741 CDS YP_001479913.1 157371924 5606974 complement(4080792..4081226) 1 NC_009832.1 PFAM: cyclase/dehydrase; KEGG: yen:YE0995 hypothetical protein; hypothetical protein 4081226 5606974 Spro_3689 Serratia proteamaculans 568 hypothetical protein YP_001479913.1 4080792 R 399741 CDS YP_001479914.1 157371925 5606975 4081388..4081870 1 NC_009832.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: yen:YE0994 SsrA-binding protein (small protein B); SsrA-binding protein 4081870 5606975 Spro_3690 Serratia proteamaculans 568 SsrA-binding protein YP_001479914.1 4081388 D 399741 CDS YP_001479915.1 157371926 5602794 4082726..4084075 1 NC_009832.1 PFAM: HipA domain protein; KEGG: vvy:VV0798 hypothetical protein; HipA domain-containing protein 4084075 5602794 Spro_3691 Serratia proteamaculans 568 HipA domain-containing protein YP_001479915.1 4082726 D 399741 CDS YP_001479916.1 157371927 5606977 4084072..4084530 1 NC_009832.1 KEGG: vco:VC0395_A0339 putative transcriptional regulator; putative transcriptional regulator 4084530 5606977 Spro_3692 Serratia proteamaculans 568 putative transcriptional regulator YP_001479916.1 4084072 D 399741 CDS YP_001479917.1 157371928 5606978 complement(4084620..4085756) 1 NC_009832.1 PFAM: secretion protein HlyD family protein; KEGG: ent:Ent638_0138 secretion protein HlyD family protein; secretion protein HlyD family protein 4085756 5606978 Spro_3693 Serratia proteamaculans 568 secretion protein HlyD family protein YP_001479917.1 4084620 R 399741 CDS YP_001479918.1 157371929 5606992 complement(4085766..4086113) 1 NC_009832.1 KEGG: ecs:ECs4463 hypothetical protein; hypothetical protein 4086113 5606992 Spro_3694 Serratia proteamaculans 568 hypothetical protein YP_001479918.1 4085766 R 399741 CDS YP_001479919.1 157371930 5606993 complement(4086153..4086806) 1 NC_009832.1 KEGG: ecv:APECO1_577 hypothetical protein; hypothetical protein 4086806 5606993 Spro_3695 Serratia proteamaculans 568 hypothetical protein YP_001479919.1 4086153 R 399741 CDS YP_001479920.1 157371931 5606994 4086932..4087879 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0144 transcriptional regulator, LysR family; LysR family transcriptional regulator 4087879 5606994 Spro_3696 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479920.1 4086932 D 399741 CDS YP_001479921.1 157371932 5607017 4088081..4088461 1 NC_009832.1 KEGG: ent:Ent638_3560 VirG-like protein; hypothetical protein 4088461 5607017 Spro_3697 Serratia proteamaculans 568 hypothetical protein YP_001479921.1 4088081 D 399741 CDS YP_001479922.1 157371933 5607018 4088622..4089302 1 NC_009832.1 KEGG: kpn:KPN_03581 hypothetical protein; CRP/FNR family transcriptional regulator 4089302 5607018 Spro_3698 Serratia proteamaculans 568 CRP/FNR family transcriptional regulator YP_001479922.1 4088622 D 399741 CDS YP_001479923.1 157371934 5607019 4089542..4090714 1 NC_009832.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ypi:YpsIP31758_3067 acriflavine resistance protein A; RND family efflux transporter MFP subunit 4090714 5607019 Spro_3699 Serratia proteamaculans 568 RND family efflux transporter MFP subunit YP_001479923.1 4089542 D 399741 CDS YP_001479924.1 157371935 5607026 4090728..4093829 1 NC_009832.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: stm:STM0475 RND family, acridine efflux pump; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4093829 5607026 Spro_3700 Serratia proteamaculans 568 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001479924.1 4090728 D 399741 CDS YP_001479925.1 157371936 5607027 4093881..4094633 1 NC_009832.1 PFAM: MltA-interacting MipA family protein; KEGG: ypi:YpsIP31758_1990 MltA-interacting protein; MltA-interacting MipA family protein 4094633 5607027 Spro_3701 Serratia proteamaculans 568 MltA-interacting MipA family protein YP_001479925.1 4093881 D 399741 CDS YP_001479926.1 157371937 5607028 4094834..4096081 1 NC_009832.1 KEGG: bch:Bcen2424_3890 hypothetical protein; hypothetical protein 4096081 5607028 Spro_3702 Serratia proteamaculans 568 hypothetical protein YP_001479926.1 4094834 D 399741 CDS YP_001479927.1 157371938 5607065 complement(4096121..4096573) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA1768 putative acetyltransferase; GCN5-like N-acetyltransferase 4096573 5607065 Spro_3703 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479927.1 4096121 R 399741 CDS YP_001479928.1 157371939 5607066 4096736..4097470 1 NC_009832.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: yen:YE1959 hypothetical protein; type 11 methyltransferase 4097470 5607066 Spro_3704 Serratia proteamaculans 568 type 11 methyltransferase YP_001479928.1 4096736 D 399741 CDS YP_001479929.1 157371940 5607067 complement(4097551..4097829) 1 NC_009832.1 KEGG: ent:Ent638_3304 hypothetical protein; hypothetical protein 4097829 5607067 Spro_3705 Serratia proteamaculans 568 hypothetical protein YP_001479929.1 4097551 R 399741 CDS YP_001479930.1 157371941 5607183 4097947..4098360 1 NC_009832.1 PFAM: DoxX family protein; KEGG: bxe:Bxe_B1209 hypothetical protein; DoxX family protein 4098360 5607183 Spro_3706 Serratia proteamaculans 568 DoxX family protein YP_001479930.1 4097947 D 399741 CDS YP_001479931.1 157371942 5607184 complement(4098411..4098983) 1 NC_009832.1 PFAM: Smr protein/MutS2; KEGG: stm:STM1658 hypothetical protein; Smr protein/MutS2 4098983 5607184 Spro_3707 Serratia proteamaculans 568 Smr protein/MutS2 YP_001479931.1 4098411 R 399741 CDS YP_001479932.1 157371943 5607185 4099156..4099494 1 NC_009832.1 KEGG: yen:YE0939 hypothetical protein; hypothetical protein 4099494 5607185 Spro_3708 Serratia proteamaculans 568 hypothetical protein YP_001479932.1 4099156 D 399741 CDS YP_001479933.1 157371944 5607258 4099561..4100007 1 NC_009832.1 KEGG: ypi:YpsIP31758_1068 hypothetical protein; hypothetical protein 4100007 5607258 Spro_3709 Serratia proteamaculans 568 hypothetical protein YP_001479933.1 4099561 D 399741 CDS YP_001479934.1 157371945 5607259 complement(4100037..4100375) 1 NC_009832.1 KEGG: yen:YE0937 hypothetical protein; hypothetical protein 4100375 5607259 Spro_3710 Serratia proteamaculans 568 hypothetical protein YP_001479934.1 4100037 R 399741 CDS YP_001479935.1 157371946 5607260 complement(4100478..4101713) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ecj:JW5945 predicted transporter; major facilitator transporter 4101713 5607260 Spro_3711 Serratia proteamaculans 568 major facilitator transporter YP_001479935.1 4100478 R 399741 CDS YP_001479936.1 157371947 5607313 complement(4101763..4102776) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE0935 AraC-family transcriptional regulator; AraC family transcriptional regulator 4102776 5607313 Spro_3712 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001479936.1 4101763 R 399741 CDS YP_001479937.1 157371948 5607314 4102906..4103946 1 NC_009832.1 KEGG: yen:YE0934 hypothetical protein; hypothetical protein 4103946 5607314 Spro_3713 Serratia proteamaculans 568 hypothetical protein YP_001479937.1 4102906 D 399741 CDS YP_001479938.1 157371949 5607315 complement(4103906..4104802) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_1086 transcriptional regulator, LysR family; LysR family transcriptional regulator 4104802 5607315 Spro_3714 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479938.1 4103906 R 399741 CDS YP_001479939.1 157371950 5607316 4104909..4106288 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_1087 major facilitator superfamily MFS_1; major facilitator transporter 4106288 5607316 Spro_3715 Serratia proteamaculans 568 major facilitator transporter YP_001479939.1 4104909 D 399741 CDS YP_001479940.1 157371951 5607317 4106288..4106668 1 NC_009832.1 KEGG: stm:STM2910 putative cytoplasmic protein; putative cytoplasmic protein 4106668 5607317 Spro_3716 Serratia proteamaculans 568 putative cytoplasmic protein YP_001479940.1 4106288 D 399741 CDS YP_001479941.1 157371952 5607318 complement(4106852..4107268) 1 NC_009832.1 required for growth and survival under moderately acid conditions; acid shock protein 4107268 5607318 Spro_3717 Serratia proteamaculans 568 acid shock protein YP_001479941.1 4106852 R 399741 CDS YP_001479942.1 157371953 5607331 4107488..4107796 1 NC_009832.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: yen:YE0932 putative inner membrane protein; hypothetical protein 4107796 5607331 Spro_3718 Serratia proteamaculans 568 hypothetical protein YP_001479942.1 4107488 D 399741 CDS YP_001479943.1 157371954 5607332 complement(4107860..4109290) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: yen:YE0931 putative GntR-family transcriptional regulatory protein; transcriptional regulator 4109290 5607332 Spro_3719 Serratia proteamaculans 568 transcriptional regulator YP_001479943.1 4107860 R 399741 CDS YP_001479944.1 157371955 5607333 4109513..4109944 1 NC_009832.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: yen:YE0930 hypothetical protein; alkylhydroperoxidase 4109944 5607333 Spro_3720 Serratia proteamaculans 568 alkylhydroperoxidase YP_001479944.1 4109513 D 399741 CDS YP_001479945.1 157371956 5607354 4110226..4110462 1 NC_009832.1 TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; KEGG: ypi:YpsIP31758_1065 glutaredoxin-related protein NrdH; glutaredoxin-like protein NrdH 4110462 5607354 Spro_3721 Serratia proteamaculans 568 glutaredoxin-like protein NrdH YP_001479945.1 4110226 D 399741 CDS YP_001479946.1 157371957 5607355 4110471..4110875 1 NC_009832.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 4110875 nrdI 5607355 nrdI Serratia proteamaculans 568 ribonucleotide reductase stimulatory protein YP_001479946.1 4110471 D 399741 CDS YP_001479947.1 157371958 5607356 4110857..4113001 1 NC_009832.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 4113001 5607356 Spro_3723 Serratia proteamaculans 568 ribonucleotide-diphosphate reductase subunit alpha YP_001479947.1 4110857 D 399741 CDS YP_001479948.1 157371959 5607389 4113010..4113981 1 NC_009832.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 4113981 nrdF 5607389 nrdF Serratia proteamaculans 568 ribonucleotide-diphosphate reductase subunit beta YP_001479948.1 4113010 D 399741 CDS YP_001479949.1 157371960 5607390 complement(4114059..4114295) 1 NC_009832.1 KEGG: azo:azo3076 conserved hypothetical protein; hypothetical protein 4114295 5607390 Spro_3725 Serratia proteamaculans 568 hypothetical protein YP_001479949.1 4114059 R 399741 CDS YP_001479950.1 157371961 5607391 complement(4114345..4114560) 1 NC_009832.1 PFAM: protein of unknown function DUF1289; KEGG: pol:Bpro_4154 YbaK/prolyl-tRNA synthetase associated region; hypothetical protein 4114560 5607391 Spro_3726 Serratia proteamaculans 568 hypothetical protein YP_001479950.1 4114345 R 399741 CDS YP_001479951.1 157371962 5607407 complement(4114633..4115373) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1016 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4115373 5607407 Spro_3727 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001479951.1 4114633 R 399741 CDS YP_001479952.1 157371963 5607408 4115497..4116390 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL3780 putative LysR family transcriptional regulator; LysR family transcriptional regulator 4116390 5607408 Spro_3728 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479952.1 4115497 D 399741 CDS YP_001479953.1 157371964 5607409 complement(4116596..4117540) 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase; beta-lactamase domain-containing protein 4117540 5607409 Spro_3729 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001479953.1 4116596 R 399741 CDS YP_001479954.1 157371965 5607415 complement(4117675..4119030) 1 NC_009832.1 PFAM: Citrate carrier protein; KEGG: eca:ECA2576 citrate/acetate antiporter; citrate carrier protein 4119030 5607415 Spro_3730 Serratia proteamaculans 568 citrate carrier protein YP_001479954.1 4117675 R 399741 CDS YP_001479955.1 157371966 5607416 4119357..4120955 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; SMART: PAS domain containing protein; KEGG: eca:ECA2577 two-component sensor kinase; signal transduction histidine kinase regulating citrate/malate metabolism 4120955 5607416 Spro_3731 Serratia proteamaculans 568 signal transduction histidine kinase regulating citrate/malate metabolism YP_001479955.1 4119357 D 399741 CDS YP_001479956.1 157371967 5607417 4120974..4121663 1 NC_009832.1 PFAM: response regulator receiver; KEGG: eca:ECA2578 two-component response regulator; response regulator receiver/unknown domain-containing protein 4121663 5607417 Spro_3732 Serratia proteamaculans 568 response regulator receiver/unknown domain-containing protein YP_001479956.1 4120974 D 399741 CDS YP_001479957.1 157371968 5607418 4122070..4123272 1 NC_009832.1 KEGG: yen:YE0925 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 4123272 5607418 Spro_3733 Serratia proteamaculans 568 glycine betaine/L-proline ABC transporter ATPase YP_001479957.1 4122070 D 399741 CDS YP_001479958.1 157371969 5607419 4123265..4124389 1 NC_009832.1 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 4124389 5607419 Spro_3734 Serratia proteamaculans 568 glycine betaine transporter membrane protein YP_001479958.1 4123265 D 399741 CDS YP_001479959.1 157371970 5607420 4124443..4125438 1 NC_009832.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 4125438 proX 5607420 proX Serratia proteamaculans 568 glycine betaine transporter periplasmic subunit YP_001479959.1 4124443 D 399741 CDS YP_001479960.1 157371971 5607427 4125490..4126491 1 NC_009832.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 4126491 proX 5607427 proX Serratia proteamaculans 568 glycine betaine transporter periplasmic subunit YP_001479960.1 4125490 D 399741 CDS YP_001479961.1 157371972 5607428 complement(4126531..4127409) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pen:PSEEN1556 transcriptional regulator, LysR family; LysR family transcriptional regulator 4127409 5607428 Spro_3737 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001479961.1 4126531 R 399741 CDS YP_001479962.1 157371973 5607429 4127514..4128713 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypn:YPN_0833 sugar transporter; major facilitator transporter 4128713 5607429 Spro_3738 Serratia proteamaculans 568 major facilitator transporter YP_001479962.1 4127514 D 399741 CDS YP_001479963.1 157371974 5603611 4128834..4129580 1 NC_009832.1 PFAM: AzlC family protein; KEGG: ypi:YpsIP31758_3198 putative azaleucine resistance protein AzlC; AzlC family protein 4129580 5603611 Spro_3739 Serratia proteamaculans 568 AzlC family protein YP_001479963.1 4128834 D 399741 CDS YP_001479964.1 157371975 5603612 4129570..4129923 1 NC_009832.1 KEGG: yen:YE3239 hypothetical protein; hypothetical protein 4129923 5603612 Spro_3740 Serratia proteamaculans 568 hypothetical protein YP_001479964.1 4129570 D 399741 CDS YP_001479965.1 157371976 5603613 4130083..4130604 1 NC_009832.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 4130604 5603613 Spro_3741 Serratia proteamaculans 568 transcriptional repressor MprA YP_001479965.1 4130083 D 399741 CDS YP_001479966.1 157371977 5602845 4130626..4132077 1 NC_009832.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: yen:YE3241 probable outer membrane efflux protein; RND efflux system outer membrane lipoprotein 4132077 5602845 Spro_3742 Serratia proteamaculans 568 RND efflux system outer membrane lipoprotein YP_001479966.1 4130626 D 399741 CDS YP_001479967.1 157371978 5602846 4132103..4133275 1 NC_009832.1 TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; KEGG: yen:YE3242 multidrug resistance protein A; efflux pump membrane protein 4133275 5602846 Spro_3743 Serratia proteamaculans 568 efflux pump membrane protein YP_001479967.1 4132103 D 399741 CDS YP_001479968.1 157371979 5602847 4133293..4134828 1 NC_009832.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_3202 multidrug resistance protein B; EmrB/QacA family drug resistance transporter 4134828 5602847 Spro_3744 Serratia proteamaculans 568 EmrB/QacA family drug resistance transporter YP_001479968.1 4133293 D 399741 CDS YP_001479969.1 157371980 5602634 complement(4135012..4136112) 1 NC_009832.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: yen:YE3244 putative tRNA/rRNA methyltransferase; putative methyltransferase 4136112 5602634 Spro_3745 Serratia proteamaculans 568 putative methyltransferase YP_001479969.1 4135012 R 399741 CDS YP_001479970.1 157371981 5602635 4136321..4136740 1 NC_009832.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ypi:YpsIP31758_3204 thioredoxin 2; thioredoxin 2 4136740 5602635 Spro_3746 Serratia proteamaculans 568 thioredoxin 2 YP_001479970.1 4136321 D 399741 CDS YP_001479971.1 157371982 5602636 4136878..4137582 1 NC_009832.1 PFAM: DTW domain containing protein; KEGG: yen:YE3246 hypothetical protein; DTW domain-containing protein 4137582 5602636 Spro_3747 Serratia proteamaculans 568 DTW domain-containing protein YP_001479971.1 4136878 D 399741 CDS YP_001479972.1 157371983 5603605 4137616..4140264 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: yps:YPTB0851 putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding; GCN5-like N-acetyltransferase 4140264 5603605 Spro_3748 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001479972.1 4137616 D 399741 CDS YP_001479973.1 157371984 5603606 4140418..4141773 1 NC_009832.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 4141773 pssA 5603606 pssA Serratia proteamaculans 568 phosphatidylserine synthase YP_001479973.1 4140418 D 399741 CDS YP_001479974.1 157371985 5603607 4141853..4142185 1 NC_009832.1 KEGG: yen:YE3251 hypothetical protein; hypothetical protein 4142185 5603607 Spro_3750 Serratia proteamaculans 568 hypothetical protein YP_001479974.1 4141853 D 399741 CDS YP_001479975.1 157371986 5603580 complement(4142187..4143497) 1 NC_009832.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA3522 alpha-ketoglutarate permease; alpha-ketoglutarate transporter 4143497 5603580 Spro_3751 Serratia proteamaculans 568 alpha-ketoglutarate transporter YP_001479975.1 4142187 R 399741 CDS YP_001479976.1 157371987 5603572 complement(4149465..4150070) 1 NC_009832.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 4150070 5603572 Spro_3752 Serratia proteamaculans 568 D,D-heptose 1,7-bisphosphate phosphatase YP_001479976.1 4149465 R 399741 CDS YP_001479977.1 157371988 5603582 4150216..4151247 1 NC_009832.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 4151247 metN 5603582 metN Serratia proteamaculans 568 DL-methionine transporter ATP-binding subunit YP_001479977.1 4150216 D 399741 CDS YP_001479978.1 157371989 5603223 4151240..4151893 1 NC_009832.1 part of the MetNIQ methionine uptake system; DL-methionine transporter permease 4151893 5603223 Spro_3754 Serratia proteamaculans 568 DL-methionine transporter permease YP_001479978.1 4151240 D 399741 CDS YP_001479979.1 157371990 5603224 4151953..4152768 1 NC_009832.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: yen:YE3255 putative lipoprotein; DL-methionine transporter substrate-binding subunit 4152768 metQ 5603224 metQ Serratia proteamaculans 568 DL-methionine transporter substrate-binding subunit YP_001479979.1 4151953 D 399741 CDS YP_001479980.1 157371991 5603225 4153035..4153439 1 NC_009832.1 KEGG: ypi:YpsIP31758_1040 putative lipoprotein; outer membrane lipoprotein 4153439 rcsF 5603225 rcsF Serratia proteamaculans 568 outer membrane lipoprotein YP_001479980.1 4153035 D 399741 CDS YP_001479981.1 157371992 5603203 4153436..4154143 1 NC_009832.1 PFAM: protein of unknown function UPF0066; KEGG: yps:YPTB2977 hypothetical protein; hypothetical protein 4154143 5603203 Spro_3757 Serratia proteamaculans 568 hypothetical protein YP_001479981.1 4153436 D 399741 CDS YP_001479982.1 157371993 5603204 4154267..4155985 1 NC_009832.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 4155985 5603204 Spro_3758 Serratia proteamaculans 568 prolyl-tRNA synthetase YP_001479982.1 4154267 D 399741 CDS YP_001479983.1 157371994 5603205 complement(4156037..4156720) 1 NC_009832.1 PFAM: copper resistance lipoprotein NlpE; KEGG: yen:YE3259 putative copper homeostasis lipoprotein; hypothetical protein 4156720 5603205 Spro_3759 Serratia proteamaculans 568 hypothetical protein YP_001479983.1 4156037 R 399741 CDS YP_001479984.1 157371995 5603160 complement(4156750..4157163) 1 NC_009832.1 PFAM: Class I peptide chain release factor; KEGG: yen:YE3260 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 4157163 5603160 Spro_3760 Serratia proteamaculans 568 peptidyl-tRNA hydrolase domain-containing protein YP_001479984.1 4156750 R 399741 CDS YP_001479985.1 157371996 5603161 complement(4157167..4157715) 1 NC_009832.1 PFAM: YaeQ family protein; KEGG: ypi:YpsIP31758_1035 hypothetical protein; YaeQ family protein 4157715 5603161 Spro_3761 Serratia proteamaculans 568 YaeQ family protein YP_001479985.1 4157167 R 399741 CDS YP_001479986.1 157371997 5603162 4157929..4158129 1 NC_009832.1 PFAM: protein of unknown function UPF0253; KEGG: ypi:YpsIP31758_1034 hypothetical protein; hypothetical protein 4158129 5603162 Spro_3762 Serratia proteamaculans 568 hypothetical protein YP_001479986.1 4157929 D 399741 CDS YP_001479987.1 157371998 5603194 4158116..4158379 1 NC_009832.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: sbo:SBO_0177 hypothetical protein; transcriptional antiterminator, Rof 4158379 5603194 Spro_3763 Serratia proteamaculans 568 transcriptional antiterminator, Rof YP_001479987.1 4158116 D 399741 CDS YP_001479988.1 157371999 5603195 complement(4158466..4158780) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: ypi:YpsIP31758_1032 cytochrome c family protein; cytochrome c class I 4158780 5603195 Spro_3764 Serratia proteamaculans 568 cytochrome c class I YP_001479988.1 4158466 R 399741 CDS YP_001479989.1 157372000 5603196 complement(4158802..4160112) 1 NC_009832.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 4160112 tilS 5603196 tilS Serratia proteamaculans 568 tRNA(Ile)-lysidine synthetase YP_001479989.1 4158802 R 399741 CDS YP_001479990.1 157372001 5603151 complement(4160169..4161617) 1 NC_009832.1 KEGG: kpn:KPN_00501 putative di-/tripeptide transport protein (POT family); TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 4161617 5603151 Spro_3766 Serratia proteamaculans 568 amino acid/peptide transporter YP_001479990.1 4160169 R 399741 CDS YP_001479991.1 157372002 5603152 complement(4161684..4163825) 1 NC_009832.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: kpn:KPN_00500 lysine decarboxylase 1; lysine decarboxylase 4163825 5603152 Spro_3767 Serratia proteamaculans 568 lysine decarboxylase YP_001479991.1 4161684 R 399741 CDS YP_001479992.1 157372003 5603153 complement(4163917..4165266) 1 NC_009832.1 antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; lysine/cadaverine antiporter 4165266 cadB 5603153 cadB Serratia proteamaculans 568 lysine/cadaverine antiporter YP_001479992.1 4163917 R 399741 CDS YP_001479993.1 157372004 5603240 complement(4165625..4167181) 1 NC_009832.1 regulates the cadBA operon; DNA-binding transcriptional activator CadC 4167181 5603240 Spro_3769 Serratia proteamaculans 568 DNA-binding transcriptional activator CadC YP_001479993.1 4165625 R 399741 CDS YP_001479994.1 157372005 5603241 complement(4167270..4167671) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: yen:YE3266 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4167671 5603241 Spro_3770 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001479994.1 4167270 R 399741 CDS YP_001479995.1 157372006 5603242 complement(4167781..4168014) 1 NC_009832.1 KEGG: pap:PSPA7_4568 hypothetical protein; hypothetical protein 4168014 5603242 Spro_3771 Serratia proteamaculans 568 hypothetical protein YP_001479995.1 4167781 R 399741 CDS YP_001479996.1 157372007 5603214 4168165..4168710 1 NC_009832.1 PFAM: regulatory protein MarR; regulatory protein Crp; regulatory protein ArsR; KEGG: pau:PA14_52070 probable transcriptional regulator; MarR family transcriptional regulator 4168710 5603214 Spro_3772 Serratia proteamaculans 568 MarR family transcriptional regulator YP_001479996.1 4168165 D 399741 CDS YP_001479997.1 157372008 5603215 complement(4168707..4170851) 1 NC_009832.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: yen:YE3267 lysine decarboxylase, constitutive; lysine decarboxylase 4170851 5603215 Spro_3773 Serratia proteamaculans 568 lysine decarboxylase YP_001479997.1 4168707 R 399741 CDS YP_001479998.1 157372009 5603216 complement(4170990..4171949) 1 NC_009832.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 4171949 5603216 Spro_3774 Serratia proteamaculans 568 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001479998.1 4170990 R 399741 CDS YP_001479999.1 157372010 5607351 complement(4171962..4175450) 1 NC_009832.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 4175450 dnaE 5607351 dnaE Serratia proteamaculans 568 DNA polymerase III subunit alpha YP_001479999.1 4171962 R 399741 CDS YP_001480000.1 157372011 5607352 complement(4175520..4176113) 1 NC_009832.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 4176113 rnhB 5607352 rnhB Serratia proteamaculans 568 ribonuclease HII YP_001480000.1 4175520 R 399741 CDS YP_001480001.1 157372012 5607353 complement(4176110..4177258) 1 NC_009832.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 4177258 lpxB 5607353 lpxB Serratia proteamaculans 568 lipid-A-disaccharide synthase YP_001480001.1 4176110 R 399741 CDS YP_001480002.1 157372013 5607345 complement(4177262..4178050) 1 NC_009832.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 4178050 5607345 Spro_3778 Serratia proteamaculans 568 UDP-N-acetylglucosamine acyltransferase YP_001480002.1 4177262 R 399741 CDS YP_001480003.1 157372014 5607346 complement(4178054..4178584) 1 NC_009832.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: eci:UTI89_C0195 (3R)-hydroxymyristol acyl carrier protein dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4178584 5607346 Spro_3779 Serratia proteamaculans 568 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001480003.1 4178054 R 399741 CDS YP_001480004.1 157372015 5607347 complement(4178671..4179693) 1 NC_009832.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 4179693 lpxD 5607347 lpxD Serratia proteamaculans 568 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001480004.1 4178671 R 399741 CDS YP_001480005.1 157372016 5607328 complement(4179698..4180228) 1 NC_009832.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: yps:YPTB2994 cationic 19 kDa outer membrane protein precursor; periplasmic chaperone 4180228 5607328 Spro_3781 Serratia proteamaculans 568 periplasmic chaperone YP_001480005.1 4179698 R 399741 CDS YP_001480006.1 157372017 5607329 complement(4180355..4182760) 1 NC_009832.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT 4182760 5607329 Spro_3782 Serratia proteamaculans 568 outer membrane protein assembly factor YaeT YP_001480006.1 4180355 R 399741 CDS YP_001480007.1 157372018 5607330 complement(4182796..4184151) 1 NC_009832.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 4184151 5607330 Spro_3783 Serratia proteamaculans 568 zinc metallopeptidase RseP YP_001480007.1 4182796 R 399741 CDS YP_001480008.1 157372019 5607295 complement(4184180..4185028) 1 NC_009832.1 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase 4185028 cdsA 5607295 cdsA Serratia proteamaculans 568 CDP-diglyceride synthase YP_001480008.1 4184180 R 399741 CDS YP_001480009.1 157372020 5607296 complement(4185038..4185796) 1 NC_009832.1 KEGG: yen:YE3279 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 4185796 5607296 Spro_3785 Serratia proteamaculans 568 undecaprenyl diphosphate synthase YP_001480009.1 4185038 R 399741 CDS YP_001480010.1 157372021 5607297 complement(4186075..4187271) 1 NC_009832.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4187271 5607297 Spro_3786 Serratia proteamaculans 568 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001480010.1 4186075 R 399741 CDS YP_001480011.1 157372022 5607206 complement(4187429..4187986) 1 NC_009832.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 4187986 frr 5607206 frr Serratia proteamaculans 568 ribosome recycling factor YP_001480011.1 4187429 R 399741 CDS YP_001480012.1 157372023 5607207 complement(4188110..4188835) 1 NC_009832.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 4188835 pyrH 5607207 pyrH Serratia proteamaculans 568 uridylate kinase YP_001480012.1 4188110 R 399741 CDS YP_001480013.1 157372024 5607208 complement(4188984..4189835) 1 NC_009832.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 4189835 tsf 5607208 tsf Serratia proteamaculans 568 elongation factor Ts YP_001480013.1 4188984 R 399741 CDS YP_001480014.1 157372025 5607189 complement(4189964..4190689) 1 NC_009832.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 4190689 rpsB 5607189 rpsB Serratia proteamaculans 568 30S ribosomal protein S2 YP_001480014.1 4189964 R 399741 CDS YP_001480015.1 157372026 5607190 4191046..4191840 1 NC_009832.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 4191840 5607190 Spro_3791 Serratia proteamaculans 568 methionine aminopeptidase YP_001480015.1 4191046 D 399741 CDS YP_001480016.1 157372027 5607191 4191915..4194593 1 NC_009832.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 4194593 5607191 Spro_3792 Serratia proteamaculans 568 PII uridylyl-transferase YP_001480016.1 4191915 D 399741 CDS YP_001480017.1 157372028 5607173 4194637..4195461 1 NC_009832.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 4195461 dapD 5607173 dapD Serratia proteamaculans 568 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001480017.1 4194637 D 399741 CDS YP_001480018.1 157372029 5607174 4195591..4195980 1 NC_009832.1 KEGG: yen:YE3288 hypothetical protein; hypothetical protein 4195980 5607174 Spro_3794 Serratia proteamaculans 568 hypothetical protein YP_001480018.1 4195591 D 399741 CDS YP_001480019.1 157372030 5607175 complement(4196079..4196528) 1 NC_009832.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 4196528 5607175 Spro_3795 Serratia proteamaculans 568 flavodoxin YP_001480019.1 4196079 R 399741 CDS YP_001480020.1 157372031 5607155 complement(4196562..4197332) 1 NC_009832.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 4197332 5607155 Spro_3796 Serratia proteamaculans 568 tRNA pseudouridine synthase C YP_001480020.1 4196562 R 399741 CDS YP_001480021.1 157372032 5607156 complement(4197332..4197661) 1 NC_009832.1 PFAM: protein of unknown function DUF446; KEGG: yen:YE3291 hypothetical protein; hypothetical protein 4197661 5607156 Spro_3797 Serratia proteamaculans 568 hypothetical protein YP_001480021.1 4197332 R 399741 CDS YP_001480022.1 157372033 5607157 4197845..4199083 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A0282 major facilitator superfamily (MFS) transporter; major facilitator transporter 4199083 5607157 Spro_3798 Serratia proteamaculans 568 major facilitator transporter YP_001480022.1 4197845 D 399741 CDS YP_001480023.1 157372034 5607127 complement(4199704..4200288) 1 NC_009832.1 putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 4200288 5607127 Spro_3799 Serratia proteamaculans 568 SecY interacting protein Syd YP_001480023.1 4199704 R 399741 CDS YP_001480024.1 157372035 5607128 4200319..4201164 1 NC_009832.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 4201164 queF 5607128 queF Serratia proteamaculans 568 7-cyano-7-deazaguanine reductase YP_001480024.1 4200319 D 399741 CDS YP_001480025.1 157372036 5607129 4201364..4202728 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: eca:ECA1019 lysine decarboxylase family protein; hypothetical protein 4202728 5607129 Spro_3801 Serratia proteamaculans 568 hypothetical protein YP_001480025.1 4201364 D 399741 CDS YP_001480026.1 157372037 5606967 4202785..4203540 1 NC_009832.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 4203540 xni 5606967 xni Serratia proteamaculans 568 exonuclease IX YP_001480026.1 4202785 D 399741 CDS YP_001480027.1 157372038 5606968 complement(4203571..4204674) 1 NC_009832.1 KEGG: ypi:YpsIP31758_1001 hypothetical protein; putative RNA 2'-O-ribose methyltransferase 4204674 5606968 Spro_3803 Serratia proteamaculans 568 putative RNA 2'-O-ribose methyltransferase YP_001480027.1 4203571 R 399741 CDS YP_001480028.1 157372039 5606969 complement(4204667..4205062) 1 NC_009832.1 PFAM: protein of unknown function DUF423; KEGG: yen:YE3299 hypothetical protein; hypothetical protein 4205062 5606969 Spro_3804 Serratia proteamaculans 568 hypothetical protein YP_001480028.1 4204667 R 399741 CDS YP_001480029.1 157372040 5606916 complement(4205115..4206032) 1 NC_009832.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 4206032 5606916 Spro_3805 Serratia proteamaculans 568 DNA-binding transcriptional activator GcvA YP_001480029.1 4205115 R 399741 CDS YP_001480030.1 157372041 5606917 complement(4206415..4206639) 1 NC_009832.1 PFAM: protein of unknown function DUF903; KEGG: yen:YE3302 lipoprotein; hypothetical protein 4206639 5606917 Spro_3806 Serratia proteamaculans 568 hypothetical protein YP_001480030.1 4206415 R 399741 CDS YP_001480031.1 157372042 5606918 4206834..4208039 1 NC_009832.1 PFAM: aminotransferase class V; KEGG: kpn:KPN_03161 cysteine sulfinate desulfinase; cysteine sulfinate desulfinase 4208039 5606918 Spro_3807 Serratia proteamaculans 568 cysteine sulfinate desulfinase YP_001480031.1 4206834 D 399741 CDS YP_001480032.1 157372043 5606911 4208058..4208492 1 NC_009832.1 PFAM: Fe-S metabolism associated SufE; KEGG: yps:YPTB3019 hypothetical protein; Fe-S metabolism associated SufE 4208492 5606911 Spro_3808 Serratia proteamaculans 568 Fe-S metabolism associated SufE YP_001480032.1 4208058 D 399741 CDS YP_001480033.1 157372044 5606912 complement(4208483..4209289) 1 NC_009832.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: yps:YPTB3020 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 4209289 5606912 Spro_3809 Serratia proteamaculans 568 UBA/THIF-type NAD/FAD binding protein YP_001480033.1 4208483 R 399741 CDS YP_001480034.1 157372045 5606913 complement(4209362..4210504) 1 NC_009832.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 4210504 mltA 5606913 mltA Serratia proteamaculans 568 murein transglycosylase A YP_001480034.1 4209362 R 399741 CDS YP_001480035.1 157372046 5602985 complement(4211180..4212433) 1 NC_009832.1 PFAM: cell wall hydrolase/autolysin; KEGG: yen:YE3307 N-acetylmuramoyl-L-alanine amidase AmiC precursor; N-acetylmuramoyl-L-alanine amidase 4212433 5602985 Spro_3811 Serratia proteamaculans 568 N-acetylmuramoyl-L-alanine amidase YP_001480035.1 4211180 R 399741 CDS YP_001480036.1 157372047 5606903 4212673..4213998 1 NC_009832.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 4213998 5606903 Spro_3812 Serratia proteamaculans 568 N-acetylglutamate synthase YP_001480036.1 4212673 D 399741 CDS YP_001480037.1 157372048 5606904 complement(4214035..4215900) 1 NC_009832.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha 4215900 recD 5606904 recD Serratia proteamaculans 568 exonuclease V subunit alpha YP_001480037.1 4214035 R 399741 CDS YP_001480038.1 157372049 5606807 complement(4215897..4219448) 1 NC_009832.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta 4219448 recB 5606807 recB Serratia proteamaculans 568 exonuclease V subunit beta YP_001480038.1 4215897 R 399741 CDS YP_001480039.1 157372050 5606808 complement(4219445..4222333) 1 NC_009832.1 PFAM: peptidase M16 domain protein; KEGG: yen:YE3311 protease III precursor; peptidase M16 domain-containing protein 4222333 5606808 Spro_3815 Serratia proteamaculans 568 peptidase M16 domain-containing protein YP_001480039.1 4219445 R 399741 CDS YP_001480040.1 157372051 5606809 complement(4222563..4225934) 1 NC_009832.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma 4225934 recC 5606809 recC Serratia proteamaculans 568 exonuclease V subunit gamma YP_001480040.1 4222563 R 399741 CDS YP_001480041.1 157372052 5606804 complement(4225968..4226309) 1 NC_009832.1 KEGG: eca:ECA0992 putative prepilin peptidase dependent protein c precursor; putative prepilin peptidase dependent protein c 4226309 5606804 Spro_3817 Serratia proteamaculans 568 putative prepilin peptidase dependent protein c YP_001480041.1 4225968 R 399741 CDS YP_001480042.1 157372053 5606805 complement(4226299..4226745) 1 NC_009832.1 KEGG: yen:YE3314 hypothetical protein; hypothetical protein 4226745 5606805 Spro_3818 Serratia proteamaculans 568 hypothetical protein YP_001480042.1 4226299 R 399741 CDS YP_001480043.1 157372054 5606806 complement(4226742..4227320) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0986 putative prepilin peptidase dependent protein; putative prepilin peptidase dependent protein 4227320 5606806 Spro_3819 Serratia proteamaculans 568 putative prepilin peptidase dependent protein YP_001480043.1 4226742 R 399741 CDS YP_001480044.1 157372055 5606798 complement(4227308..4227817) 1 NC_009832.1 KEGG: yen:YE3316 hypothetical protein; hypothetical protein 4227817 5606798 Spro_3820 Serratia proteamaculans 568 hypothetical protein YP_001480044.1 4227308 R 399741 CDS YP_001480045.1 157372056 5606799 complement(4228016..4228810) 1 NC_009832.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 4228810 thyA 5606799 thyA Serratia proteamaculans 568 thymidylate synthase YP_001480045.1 4228016 R 399741 CDS YP_001480046.1 157372057 5606800 complement(4228818..4229690) 1 NC_009832.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 4229690 5606800 Spro_3822 Serratia proteamaculans 568 prolipoprotein diacylglyceryl transferase YP_001480046.1 4228818 R 399741 CDS YP_001480047.1 157372058 5606720 complement(4229884..4232130) 1 NC_009832.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 4232130 5606720 Spro_3823 Serratia proteamaculans 568 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain YP_001480047.1 4229884 R 399741 CDS YP_001480048.1 157372059 5606721 complement(4232143..4232670) 1 NC_009832.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 4232670 5606721 Spro_3824 Serratia proteamaculans 568 dinucleoside polyphosphate hydrolase YP_001480048.1 4232143 R 399741 CDS YP_001480049.1 157372060 5606722 4233367..4234053 1 NC_009832.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 4234053 5606722 Spro_3825 Serratia proteamaculans 568 DNA mismatch repair protein YP_001480049.1 4233367 D 399741 CDS YP_001480050.1 157372061 5606662 4234149..4234865 1 NC_009832.1 PFAM: Integral membrane protein TerC; KEGG: yen:YE3323 putative integral membrane protein; integral membrane protein TerC 4234865 5606662 Spro_3826 Serratia proteamaculans 568 integral membrane protein TerC YP_001480050.1 4234149 D 399741 CDS YP_001480051.1 157372062 5606663 4235033..4235251 1 NC_009832.1 PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3050 hypothetical protein; hypothetical protein 4235251 5606663 Spro_3827 Serratia proteamaculans 568 hypothetical protein YP_001480051.1 4235033 D 399741 CDS YP_001480052.1 157372063 5606664 4235449..4236489 1 NC_009832.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; putative aldo-keto reductase 4236489 tas 5606664 tas Serratia proteamaculans 568 putative aldo-keto reductase YP_001480052.1 4235449 D 399741 CDS YP_001480053.1 157372064 5606634 complement(4236542..4237738) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3326 hypothetical protein; lysophospholipid transporter LplT 4237738 5606634 Spro_3829 Serratia proteamaculans 568 lysophospholipid transporter LplT YP_001480053.1 4236542 R 399741 CDS YP_001480054.1 157372065 5606635 complement(4237738..4239891) 1 NC_009832.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 4239891 5606635 Spro_3830 Serratia proteamaculans 568 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_001480054.1 4237738 R 399741 CDS YP_001480055.1 157372066 5606636 complement(4240534..4242792) 1 NC_009832.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE3330 putative biotin sulfoxide reductas2; molybdopterin oxidoreductase 4242792 5606636 Spro_3831 Serratia proteamaculans 568 molybdopterin oxidoreductase YP_001480055.1 4240534 R 399741 CDS YP_001480056.1 157372067 5606566 4243012..4244031 1 NC_009832.1 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 4244031 5606566 Spro_3832 Serratia proteamaculans 568 DNA-binding transcriptional regulator GalR YP_001480056.1 4243012 D 399741 CDS YP_001480057.1 157372068 5606567 complement(4244028..4244483) 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3643 GnaT-family acetyltransferase; GCN5-like N-acetyltransferase 4244483 5606567 Spro_3833 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001480057.1 4244028 R 399741 CDS YP_001480058.1 157372069 5606568 4244638..4245648 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA3649 transcriptional repressor of carbon metabolism; LacI family transcription regulator 4245648 5606568 Spro_3834 Serratia proteamaculans 568 LacI family transcription regulator YP_001480058.1 4244638 D 399741 CDS YP_001480059.1 157372070 5606523 4245824..4246126 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: mmw:Mmwyl1_0665 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 4246126 5606523 Spro_3835 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001480059.1 4245824 D 399741 CDS YP_001480060.1 157372071 5606524 complement(4246160..4247422) 1 NC_009832.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 4247422 5606524 Spro_3836 Serratia proteamaculans 568 diaminopimelate decarboxylase YP_001480060.1 4246160 R 399741 CDS YP_001480061.1 157372072 5606525 4247555..4248478 1 NC_009832.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR 4248478 5606525 Spro_3837 Serratia proteamaculans 568 DNA-binding transcriptional regulator LysR YP_001480061.1 4247555 D 399741 CDS YP_001480062.1 157372073 5606508 complement(4248468..4249622) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_0971 transporter, major facilitator family; major facilitator transporter 4249622 5606508 Spro_3838 Serratia proteamaculans 568 major facilitator transporter YP_001480062.1 4248468 R 399741 CDS YP_001480063.1 157372074 5606509 complement(4249938..4250846) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0969 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator 4250846 5606509 Spro_3839 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480063.1 4249938 R 399741 CDS YP_001480064.1 157372075 5606510 4250956..4251840 1 NC_009832.1 PFAM: beta-lactamase domain protein; KEGG: yps:YPTB3049 hypothetical protein; beta-lactamase domain-containing protein 4251840 5606510 Spro_3840 Serratia proteamaculans 568 beta-lactamase domain-containing protein YP_001480064.1 4250956 D 399741 CDS YP_001480065.1 157372076 5606430 4251916..4252566 1 NC_009832.1 KEGG: rso:RSc1444 hypothetical protein; hypothetical protein 4252566 5606430 Spro_3841 Serratia proteamaculans 568 hypothetical protein YP_001480065.1 4251916 D 399741 CDS YP_001480066.1 157372077 5606431 complement(4252616..4253323) 1 NC_009832.1 KEGG: spt:SPA0730 hypothetical protein; hypothetical protein 4253323 5606431 Spro_3842 Serratia proteamaculans 568 hypothetical protein YP_001480066.1 4252616 R 399741 CDS YP_001480067.1 157372078 5606432 4253515..4255251 1 NC_009832.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mms:mma_0271 ABC-type transport system, permease and ATPase components; ABC transporter 4255251 5606432 Spro_3843 Serratia proteamaculans 568 ABC transporter YP_001480067.1 4253515 D 399741 CDS YP_001480068.1 157372079 5606391 complement(4255292..4255726) 1 NC_009832.1 PFAM: PTS system fructose subfamily IIA component; KEGG: plu:plu0838 unnamed protein product; similar to putative PTS system IIA component YadI of Escherichia coli; PTS system fructose subfamily transporter subunit IIA 4255726 5606391 Spro_3844 Serratia proteamaculans 568 PTS system fructose subfamily transporter subunit IIA YP_001480068.1 4255292 R 399741 CDS YP_001480069.1 157372080 5606392 complement(4255737..4256630) 1 NC_009832.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: plu:plu0837 PTS system, N-acetylgalactosamine-specific IID component (EIID-AGA) (N-acetylgalactosamine-permease IID component) (phosphotransferase enzyme II, D component); PTS system mannose/fructose/sorbose family transporter subunit IID 4256630 5606392 Spro_3845 Serratia proteamaculans 568 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001480069.1 4255737 R 399741 CDS YP_001480070.1 157372081 5606393 complement(4256620..4257399) 1 NC_009832.1 PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: plu:plu0836 PTS system, N-acetylgalactosamine-specific IIC component 1 (EIIC-AGA) (N-acetylgalactosamine-permease IIC component 1); PTS system sorbose-specific transporter subunit IIC 4257399 5606393 Spro_3846 Serratia proteamaculans 568 PTS system sorbose-specific transporter subunit IIC YP_001480070.1 4256620 R 399741 CDS YP_001480071.1 157372082 5606252 complement(4257414..4257890) 1 NC_009832.1 KEGG: plu:plu0835 PTS system, N-acetylgalactosamine-specific IIB component 2 (EIIB-AGA') (N-acetylgalactosamine-permease IIB component 2) (phosphotransferase enzyme II, B component 2); TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB 4257890 5606252 Spro_3847 Serratia proteamaculans 568 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_001480071.1 4257414 R 399741 CDS YP_001480072.1 157372083 5606253 complement(4257892..4259175) 1 NC_009832.1 PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: plu:plu0833 putative tagatose 6-phosphate kinase AgaZ; tagatose-6-phosphate kinase 4259175 5606253 Spro_3848 Serratia proteamaculans 568 tagatose-6-phosphate kinase YP_001480072.1 4257892 R 399741 CDS YP_001480073.1 157372084 5606254 complement(4259199..4259972) 1 NC_009832.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: plu:plu0832 putative aga operon transcriptional repressor; DeoR family transcriptional regulator 4259972 5606254 Spro_3849 Serratia proteamaculans 568 DeoR family transcriptional regulator YP_001480073.1 4259199 R 399741 CDS YP_001480074.1 157372085 5606383 4260486..4261706 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM1278 putative MFS family transport protein (amino acid/amine transport); major facilitator transporter 4261706 5606383 Spro_3850 Serratia proteamaculans 568 major facilitator transporter YP_001480074.1 4260486 D 399741 CDS YP_001480075.1 157372086 5606384 complement(4261696..4261950) 1 NC_009832.1 hypothetical protein 4261950 5606384 Spro_3851 Serratia proteamaculans 568 hypothetical protein YP_001480075.1 4261696 R 399741 CDS YP_001480076.1 157372087 5606385 complement(4262397..4264049) 1 NC_009832.1 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding component 4264049 5606385 Spro_3852 Serratia proteamaculans 568 multidrug transporter membrane component/ATP-binding component YP_001480076.1 4262397 R 399741 CDS YP_001480077.1 157372088 5606180 4264203..4265123 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pin:Ping_1689 transcriptional regulator, substrate-binding of LysR family protein; LysR family transcriptional regulator 4265123 5606180 Spro_3853 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480077.1 4264203 D 399741 CDS YP_001480078.1 157372089 5606181 4265458..4267038 1 NC_009832.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: ppr:PBPRA2223 hypothetical L-lactate permease (LctP); L-lactate transport 4267038 5606181 Spro_3854 Serratia proteamaculans 568 L-lactate transport YP_001480078.1 4265458 D 399741 CDS YP_001480079.1 157372090 5606182 4267073..4268215 1 NC_009832.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 4268215 lldD 5606182 lldD Serratia proteamaculans 568 L-lactate dehydrogenase YP_001480079.1 4267073 D 399741 CDS YP_001480080.1 157372091 5606088 complement(4268280..4269230) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02460 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 4269230 5606088 Spro_3856 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480080.1 4268280 R 399741 CDS YP_001480081.1 157372092 5606089 4269371..4269760 1 NC_009832.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: kpn:KPN_02461 putative 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 4269760 5606089 Spro_3857 Serratia proteamaculans 568 4-oxalocrotonate tautomerase YP_001480081.1 4269371 D 399741 CDS YP_001480082.1 157372093 5606090 complement(4269804..4271573) 1 NC_009832.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB1082 putative ABC transport protein with fused ATP binding and permease domains; ABC transporter-like protein 4271573 5606090 Spro_3858 Serratia proteamaculans 568 ABC transporter-like protein YP_001480082.1 4269804 R 399741 CDS YP_001480083.1 157372094 5606071 4271783..4272352 1 NC_009832.1 KEGG: ypi:YpsIP31758_0502 hypothetical protein; acid-resistance membrane protein 4272352 5606071 Spro_3859 Serratia proteamaculans 568 acid-resistance membrane protein YP_001480083.1 4271783 D 399741 CDS YP_001480084.1 157372095 5606072 4272508..4273437 1 NC_009832.1 functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock; curved DNA-binding protein CbpA 4273437 5606072 Spro_3860 Serratia proteamaculans 568 curved DNA-binding protein CbpA YP_001480084.1 4272508 D 399741 CDS YP_001480085.1 157372096 5606073 4273430..4273735 1 NC_009832.1 with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; chaperone-modulator protein CbpM 4273735 5606073 Spro_3861 Serratia proteamaculans 568 chaperone-modulator protein CbpM YP_001480085.1 4273430 D 399741 CDS YP_001480086.1 157372097 5605964 4274896..4275108 1 NC_009832.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ent:Ent638_0201 putative cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 4275108 5605964 Spro_3862 Serratia proteamaculans 568 cold-shock DNA-binding domain-containing protein YP_001480086.1 4274896 D 399741 CDS YP_001480087.1 157372098 5605965 complement(4275274..4276614) 1 NC_009832.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 4276614 5605965 Spro_3863 Serratia proteamaculans 568 anaerobic C4-dicarboxylate transporter YP_001480087.1 4275274 R 399741 CDS YP_001480088.1 157372099 5605966 complement(4276937..4277851) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_0767 transcriptional regulator, LysR family; LysR family transcriptional regulator 4277851 5605966 Spro_3864 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480088.1 4276937 R 399741 CDS YP_001480089.1 157372100 5604029 4277972..4278715 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_4578 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4278715 5604029 Spro_3865 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480089.1 4277972 D 399741 CDS YP_001480090.1 157372101 5604030 4278954..4279703 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ava:Ava_3459 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4279703 5604030 Spro_3866 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480090.1 4278954 D 399741 CDS YP_001480091.1 157372102 5604031 4279727..4281193 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: ppu:PP_2487 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 4281193 5604031 Spro_3867 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001480091.1 4279727 D 399741 CDS YP_001480092.1 157372103 5605920 4281940..4282584 1 NC_009832.1 KEGG: vco:VC0395_A0804 hypothetical protein; hypothetical protein 4282584 5605920 Spro_3868 Serratia proteamaculans 568 hypothetical protein YP_001480092.1 4281940 D 399741 CDS YP_001480093.1 157372104 5605921 4282581..4283810 1 NC_009832.1 KEGG: vpa:VP1253 NifS-related protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase family protein 4283810 5605921 Spro_3869 Serratia proteamaculans 568 cysteine desulfurase family protein YP_001480093.1 4282581 D 399741 CDS YP_001480094.1 157372105 5605922 4284451..4284693 1 NC_009832.1 PFAM: Prophage CP4-57 regulatory; KEGG: ecv:APECO1_4024 putative phage regulatory protein; phage transcriptional regulator AlpA 4284693 5605922 Spro_3870 Serratia proteamaculans 568 phage transcriptional regulator AlpA YP_001480094.1 4284451 D 399741 CDS YP_001480095.1 157372106 5605883 4284718..4285068 1 NC_009832.1 hypothetical protein 4285068 5605883 Spro_3871 Serratia proteamaculans 568 hypothetical protein YP_001480095.1 4284718 D 399741 CDS YP_001480096.1 157372107 5605884 4285543..4286406 1 NC_009832.1 hypothetical protein 4286406 5605884 Spro_3872 Serratia proteamaculans 568 hypothetical protein YP_001480096.1 4285543 D 399741 CDS YP_001480097.1 157372108 5605885 4286554..4286922 1 NC_009832.1 hypothetical protein 4286922 5605885 Spro_3873 Serratia proteamaculans 568 hypothetical protein YP_001480097.1 4286554 D 399741 CDS YP_001480098.1 157372109 5605754 4286946..4287464 1 NC_009832.1 hypothetical protein 4287464 5605754 Spro_3874 Serratia proteamaculans 568 hypothetical protein YP_001480098.1 4286946 D 399741 CDS YP_001480099.1 157372110 5605755 complement(4287983..4290535) 1 NC_009832.1 KEGG: ecv:APECO1_4054 hypothetical protein; hypothetical protein 4290535 5605755 Spro_3875 Serratia proteamaculans 568 hypothetical protein YP_001480099.1 4287983 R 399741 CDS YP_001480100.1 157372111 5605756 complement(4290535..4292223) 1 NC_009832.1 hypothetical protein 4292223 5605756 Spro_3876 Serratia proteamaculans 568 hypothetical protein YP_001480100.1 4290535 R 399741 CDS YP_001480101.1 157372112 5605724 complement(4292220..4294916) 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: ecv:APECO1_4052 hypothetical protein; lytic transglycosylase 4294916 5605724 Spro_3877 Serratia proteamaculans 568 lytic transglycosylase YP_001480101.1 4292220 R 399741 CDS YP_001480102.1 157372113 5605725 complement(4295592..4296500) 1 NC_009832.1 KEGG: net:Neut_1492 hypothetical protein; hypothetical protein 4296500 5605725 Spro_3878 Serratia proteamaculans 568 hypothetical protein YP_001480102.1 4295592 R 399741 CDS YP_001480103.1 157372114 5605726 complement(4296868..4297275) 1 NC_009832.1 hypothetical protein 4297275 5605726 Spro_3879 Serratia proteamaculans 568 hypothetical protein YP_001480103.1 4296868 R 399741 CDS YP_001480104.1 157372115 5605666 complement(4297409..4297750) 1 NC_009832.1 KEGG: ece:Z1446 unknown protein encoded by bacteriophage BP-933W; hypothetical protein 4297750 5605666 Spro_3880 Serratia proteamaculans 568 hypothetical protein YP_001480104.1 4297409 R 399741 CDS YP_001480105.1 157372116 5605667 complement(4298787..4301576) 1 NC_009832.1 PFAM: P4 alpha zinc-binding domain protein; KEGG: eca:ECA2754 putative prophage primase; P4 alpha zinc-binding domain-containing protein 4301576 5605667 Spro_3881 Serratia proteamaculans 568 P4 alpha zinc-binding domain-containing protein YP_001480105.1 4298787 R 399741 CDS YP_001480106.1 157372117 5605668 complement(4301906..4302502) 1 NC_009832.1 hypothetical protein 4302502 5605668 Spro_3882 Serratia proteamaculans 568 hypothetical protein YP_001480106.1 4301906 R 399741 CDS YP_001480107.1 157372118 5605383 complement(4302888..4303619) 1 NC_009832.1 KEGG: ecc:c1487 hypothetical protein; hypothetical protein 4303619 5605383 Spro_3883 Serratia proteamaculans 568 hypothetical protein YP_001480107.1 4302888 R 399741 CDS YP_001480108.1 157372119 5605384 complement(4303612..4304421) 1 NC_009832.1 PFAM: AntA/AntB antirepressor domain protein; KEGG: sbo:SBO_3650 putative anti-repressor protein; AntA/AntB antirepressor domain-containing protein 4304421 5605384 Spro_3884 Serratia proteamaculans 568 AntA/AntB antirepressor domain-containing protein YP_001480108.1 4303612 R 399741 CDS YP_001480109.1 157372120 5605385 complement(4304518..4304724) 1 NC_009832.1 PFAM: Prophage CP4-57 regulatory; KEGG: yen:YE0975A hypothetical protein; phage transcriptional regulator AlpA 4304724 5605385 Spro_3885 Serratia proteamaculans 568 phage transcriptional regulator AlpA YP_001480109.1 4304518 R 399741 CDS YP_001480110.1 157372121 5605324 complement(4304905..4305441) 1 NC_009832.1 hypothetical protein 4305441 5605324 Spro_3886 Serratia proteamaculans 568 hypothetical protein YP_001480110.1 4304905 R 399741 CDS YP_001480111.1 157372122 5605325 complement(4305958..4307172) 1 NC_009832.1 PFAM: integrase family protein; KEGG: ypn:YPN_3086 integrase; integrase family protein 4307172 5605325 Spro_3887 Serratia proteamaculans 568 integrase family protein YP_001480111.1 4305958 R 399741 CDS YP_001480112.1 157372123 5602986 complement(4307579..4309096) 1 NC_009832.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 4309096 lysS 5602986 lysS Serratia proteamaculans 568 lysyl-tRNA synthetase YP_001480112.1 4307579 R 399741 CDS YP_001480113.1 157372124 5606657 complement(4310371..4312104) 1 NC_009832.1 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ 4312104 5606657 Spro_3890 Serratia proteamaculans 568 ssDNA exonuclease RecJ YP_001480113.1 4310371 R 399741 CDS YP_001480114.1 157372125 5605317 complement(4312111..4312827) 1 NC_009832.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 4312827 5605317 Spro_3891 Serratia proteamaculans 568 thiol:disulfide interchange protein DsbC YP_001480114.1 4312111 R 399741 CDS YP_001480115.1 157372126 5605318 complement(4312855..4313754) 1 NC_009832.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 4313754 xerD 5605318 xerD Serratia proteamaculans 568 site-specific tyrosine recombinase XerD YP_001480115.1 4312855 R 399741 CDS YP_001480116.1 157372127 5605175 4313778..4314380 1 NC_009832.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 4314380 5605175 Spro_3893 Serratia proteamaculans 568 flavodoxin FldB YP_001480116.1 4313778 D 399741 CDS YP_001480117.1 157372128 5605176 complement(4314417..4315781) 1 NC_009832.1 PFAM: Inner membrane CreD family protein; KEGG: yen:YE3382 hypothetical protein; hypothetical protein 4315781 5605176 Spro_3894 Serratia proteamaculans 568 hypothetical protein YP_001480117.1 4314417 R 399741 CDS YP_001480118.1 157372129 5605177 complement(4315864..4317282) 1 NC_009832.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 4317282 5605177 Spro_3895 Serratia proteamaculans 568 sensory histidine kinase CreC YP_001480118.1 4315864 R 399741 CDS YP_001480119.1 157372130 5605124 complement(4317279..4317974) 1 NC_009832.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB 4317974 5605124 Spro_3896 Serratia proteamaculans 568 DNA-binding response regulator CreB YP_001480119.1 4317279 R 399741 CDS YP_001480120.1 157372131 5605125 complement(4317974..4318396) 1 NC_009832.1 PFAM: protein of unknown function DUF1434; KEGG: yen:YE3385 hypothetical protein; hypothetical protein 4318396 5605125 Spro_3897 Serratia proteamaculans 568 hypothetical protein YP_001480120.1 4317974 R 399741 CDS YP_001480121.1 157372132 5605126 complement(4318377..4318643) 1 NC_009832.1 PFAM: protein of unknown function DUF339; KEGG: kpn:KPN_03325 hypothetical protein; hypothetical protein 4318643 5605126 Spro_3898 Serratia proteamaculans 568 hypothetical protein YP_001480121.1 4318377 R 399741 CDS YP_001480122.1 157372133 5605065 4318967..4319959 1 NC_009832.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; putative global regulator 4319959 5605065 Spro_3899 Serratia proteamaculans 568 putative global regulator YP_001480122.1 4318967 D 399741 CDS YP_001480123.1 157372134 5605066 complement(4320050..4320724) 1 NC_009832.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: yps:YPTB3176 putative hemolysin III; hemolysin III family channel protein 4320724 5605066 Spro_3900 Serratia proteamaculans 568 hemolysin III family channel protein YP_001480123.1 4320050 R 399741 CDS YP_001480124.1 157372135 5605067 4320908..4321516 1 NC_009832.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eca:ECA0756 hypothetical protein; metal dependent phosphohydrolase 4321516 5605067 Spro_3901 Serratia proteamaculans 568 metal dependent phosphohydrolase YP_001480124.1 4320908 D 399741 CDS YP_001480125.1 157372136 5604843 complement(4321567..4322892) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4787 major facilitator superfamily MFS_1; major facilitator transporter 4322892 5604843 Spro_3902 Serratia proteamaculans 568 major facilitator transporter YP_001480125.1 4321567 R 399741 CDS YP_001480126.1 157372137 5604844 complement(4322889..4323542) 1 NC_009832.1 KEGG: bbr:BB2981 hypothetical protein; hypothetical protein 4323542 5604844 Spro_3903 Serratia proteamaculans 568 hypothetical protein YP_001480126.1 4322889 R 399741 CDS YP_001480127.1 157372138 5604845 complement(4323594..4324943) 1 NC_009832.1 PFAM: Amidase; KEGG: bbr:BB2998 putative amidase; amidase 4324943 5604845 Spro_3904 Serratia proteamaculans 568 amidase YP_001480127.1 4323594 R 399741 CDS YP_001480128.1 157372139 5604666 complement(4324943..4325656) 1 NC_009832.1 KEGG: bbr:BB2999 hypothetical protein; hypothetical protein 4325656 5604666 Spro_3905 Serratia proteamaculans 568 hypothetical protein YP_001480128.1 4324943 R 399741 CDS YP_001480129.1 157372140 5604667 4325729..4326463 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0040 transcriptional regulator, GntR family; GntR family transcriptional regulator 4326463 5604667 Spro_3906 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001480129.1 4325729 D 399741 CDS YP_001480130.1 157372141 5604668 complement(4326554..4326832) 1 NC_009832.1 KEGG: vei:Veis_5032 putative cytoplasmic protein; putative cytoplasmic protein 4326832 5604668 Spro_3907 Serratia proteamaculans 568 putative cytoplasmic protein YP_001480130.1 4326554 R 399741 CDS YP_001480131.1 157372142 5604559 complement(4326849..4327157) 1 NC_009832.1 PFAM: protein of unknown function DUF497; KEGG: gur:Gura_2272 protein of unknown function DUF497; hypothetical protein 4327157 5604559 Spro_3908 Serratia proteamaculans 568 hypothetical protein YP_001480131.1 4326849 R 399741 CDS YP_001480132.1 157372143 5604560 complement(4327254..4328000) 1 NC_009832.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03338 putative oxidoreductase; hypothetical protein 4328000 5604560 Spro_3909 Serratia proteamaculans 568 hypothetical protein YP_001480132.1 4327254 R 399741 CDS YP_001480133.1 157372144 5604561 4328564..4329223 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bch:Bcen2424_4924 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4329223 5604561 Spro_3910 Serratia proteamaculans 568 two component transcriptional regulator YP_001480133.1 4328564 D 399741 CDS YP_001480134.1 157372145 5604448 4329220..4330626 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: eba:ebA6233 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4330626 5604448 Spro_3911 Serratia proteamaculans 568 integral membrane sensor signal transduction histidine kinase YP_001480134.1 4329220 D 399741 CDS YP_001480135.1 157372146 5604449 complement(4330726..4331694) 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: swi:Swit_2294 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4331694 5604449 Spro_3912 Serratia proteamaculans 568 alcohol dehydrogenase YP_001480135.1 4330726 R 399741 CDS YP_001480136.1 157372147 5604450 complement(4331809..4335084) 1 NC_009832.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: dps:DP0247 similar to serine protease; outer membrane autotransporter 4335084 5604450 Spro_3913 Serratia proteamaculans 568 outer membrane autotransporter YP_001480136.1 4331809 R 399741 CDS YP_001480137.1 157372148 5604354 complement(4335324..4338203) 1 NC_009832.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4338203 5604354 Spro_3914 Serratia proteamaculans 568 glycine dehydrogenase YP_001480137.1 4335324 R 399741 CDS YP_001480138.1 157372149 5604355 complement(4338296..4338682) 1 NC_009832.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: yen:YE3392 glycine cleavage system H protein; glycine cleavage system H protein 4338682 5604355 Spro_3915 Serratia proteamaculans 568 glycine cleavage system H protein YP_001480138.1 4338296 R 399741 CDS YP_001480139.1 157372150 5604356 complement(4338728..4339825) 1 NC_009832.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4339825 gcvT 5604356 gcvT Serratia proteamaculans 568 glycine cleavage system aminomethyltransferase T YP_001480139.1 4338728 R 399741 CDS YP_001480140.1 157372151 5604217 complement(4340371..4341573) 1 NC_009832.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: yen:YE3394 putative monooxygenase; hypothetical protein 4341573 5604217 Spro_3917 Serratia proteamaculans 568 hypothetical protein YP_001480140.1 4340371 R 399741 CDS YP_001480141.1 157372152 5604218 complement(4341657..4342835) 1 NC_009832.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 4342835 5604218 Spro_3918 Serratia proteamaculans 568 2-octaprenyl-6-methoxyphenyl hydroxylase YP_001480141.1 4341657 R 399741 CDS YP_001480142.1 157372153 5604219 complement(4342840..4344153) 1 NC_009832.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 4344153 5604219 Spro_3919 Serratia proteamaculans 568 proline aminopeptidase P II YP_001480142.1 4342840 R 399741 CDS YP_001480143.1 157372154 5604188 complement(4344214..4344792) 1 NC_009832.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 4344792 5604188 Spro_3920 Serratia proteamaculans 568 hypothetical protein YP_001480143.1 4344214 R 399741 CDS YP_001480144.1 157372155 5604189 4345114..4345443 1 NC_009832.1 PFAM: protein of unknown function DUF710; KEGG: yen:YE3398 hypothetical protein; Z-ring-associated protein 4345443 5604189 Spro_3921 Serratia proteamaculans 568 Z-ring-associated protein YP_001480144.1 4345114 D 399741 CDS YP_001480145.1 157372156 5604190 4345624..4346304 1 NC_009832.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ypp:YPDSF_0601 5-formyltetrahydrofolate cyclo-ligase-family protein; 5-formyltetrahydrofolate cyclo-ligase 4346304 5604190 Spro_3922 Serratia proteamaculans 568 5-formyltetrahydrofolate cyclo-ligase YP_001480145.1 4345624 D 399741 CDS YP_001480146.1 157372157 5604007 complement(4346348..4347586) 1 NC_009832.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4347586 5604007 Spro_3923 Serratia proteamaculans 568 D-3-phosphoglycerate dehydrogenase YP_001480146.1 4346348 R 399741 CDS YP_001480147.1 157372158 5604008 complement(4347888..4348607) 1 NC_009832.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 4348607 5604008 Spro_3924 Serratia proteamaculans 568 ribose-5-phosphate isomerase A YP_001480147.1 4347888 R 399741 CDS YP_001480148.1 157372159 5604009 4348748..4349641 1 NC_009832.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 4349641 5604009 Spro_3925 Serratia proteamaculans 568 chromosome replication initiation inhibitor protein YP_001480148.1 4348748 D 399741 CDS YP_001480149.1 157372160 5604163 complement(4349942..4350673) 1 NC_009832.1 PFAM: protein of unknown function DUF541; KEGG: yen:YE3403 hypothetical protein; hypothetical protein 4350673 5604163 Spro_3926 Serratia proteamaculans 568 hypothetical protein YP_001480149.1 4349942 R 399741 CDS YP_001480150.1 157372161 5604164 complement(4350785..4351402) 1 NC_009832.1 Involved in the export of arginine; arginine exporter protein 4351402 5604164 Spro_3927 Serratia proteamaculans 568 arginine exporter protein YP_001480150.1 4350785 R 399741 CDS YP_001480151.1 157372162 5604165 complement(4351526..4352344) 1 NC_009832.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ecv:APECO1_2876 predicted DNA-binding transcriptional repressor; IclR family transcriptional regulator 4352344 5604165 Spro_3928 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001480151.1 4351526 R 399741 CDS YP_001480152.1 157372163 5603974 4352707..4354260 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM1251 ribose transport ATP-binding protein; ABC transporter-like protein 4354260 5603974 Spro_3929 Serratia proteamaculans 568 ABC transporter-like protein YP_001480152.1 4352707 D 399741 CDS YP_001480153.1 157372164 5603975 4354253..4355335 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: pmu:PM1250 ribose transport system permease; monosaccharide-transporting ATPase 4355335 5603975 Spro_3930 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001480153.1 4354253 D 399741 CDS YP_001480154.1 157372165 5603976 4355351..4356451 1 NC_009832.1 KEGG: pmu:PM1249 unknown; hypothetical protein 4356451 5603976 Spro_3931 Serratia proteamaculans 568 hypothetical protein YP_001480154.1 4355351 D 399741 CDS YP_001480155.1 157372166 5603939 4356463..4357323 1 NC_009832.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pmu:PM1248 gluconolactonase; gluconolactonase 4357323 5603939 Spro_3932 Serratia proteamaculans 568 gluconolactonase YP_001480155.1 4356463 D 399741 CDS YP_001480156.1 157372167 5603940 4357580..4358578 1 NC_009832.1 NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; 2,3-diketo-L-gulonate reductase 4358578 5603940 Spro_3933 Serratia proteamaculans 568 2,3-diketo-L-gulonate reductase YP_001480156.1 4357580 D 399741 CDS YP_001480157.1 157372168 5603941 4358592..4359062 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: pmu:PM1255 hypothetical E.coli; hypothetical protein 4359062 5603941 Spro_3934 Serratia proteamaculans 568 hypothetical protein YP_001480157.1 4358592 D 399741 CDS YP_001480158.1 157372169 5603950 4359171..4360466 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B1218 MFS transporter; major facilitator transporter 4360466 5603950 Spro_3935 Serratia proteamaculans 568 major facilitator transporter YP_001480158.1 4359171 D 399741 CDS YP_001480159.1 157372170 5603951 4360466..4361947 1 NC_009832.1 PFAM: carbohydrate kinase FGGY; KEGG: eci:UTI89_C4124 cryptic L-xylulose kinase; carbohydrate kinase FGGY 4361947 5603951 Spro_3936 Serratia proteamaculans 568 carbohydrate kinase FGGY YP_001480159.1 4360466 D 399741 CDS YP_001480160.1 157372171 5603952 4361944..4362600 1 NC_009832.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; 3-keto-L-gulonate-6-phosphate decarboxylase 4362600 sgbH 5603952 sgbH Serratia proteamaculans 568 3-keto-L-gulonate-6-phosphate decarboxylase YP_001480160.1 4361944 D 399741 CDS YP_001480161.1 157372172 5603915 4362602..4363462 1 NC_009832.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase 4363462 5603915 Spro_3938 Serratia proteamaculans 568 putative L-xylulose 5-phosphate 3-epimerase YP_001480161.1 4362602 D 399741 CDS YP_001480162.1 157372173 5603916 4363456..4364157 1 NC_009832.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4364157 sgbE 5603916 sgbE Serratia proteamaculans 568 L-ribulose-5-phosphate 4-epimerase YP_001480162.1 4363456 D 399741 CDS YP_001480163.1 157372174 5603917 4364353..4365051 1 NC_009832.1 PFAM: pseudouridine synthase; KEGG: yen:YE2636 putative ribosomal large subunit pseudouridine synthase; pseudouridine synthase 4365051 5603917 Spro_3940 Serratia proteamaculans 568 pseudouridine synthase YP_001480163.1 4364353 D 399741 CDS YP_001480164.1 157372175 5603816 4365279..4366628 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RS01667 putative 4-hydroxybenzoate transporter transmembrane protein; major facilitator transporter 4366628 5603816 Spro_3941 Serratia proteamaculans 568 major facilitator transporter YP_001480164.1 4365279 D 399741 CDS YP_001480165.1 157372176 5603817 complement(4366661..4367527) 1 NC_009832.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: ypi:YpsIP31758_0851 transporter, small conductance mechanosensitive ion channel (MscS) family; mechanosensitive ion channel MscS 4367527 5603817 Spro_3942 Serratia proteamaculans 568 mechanosensitive ion channel MscS YP_001480165.1 4366661 R 399741 CDS YP_001480166.1 157372177 5603818 4367721..4368389 1 NC_009832.1 PFAM: protein of unknown function DUF1345; KEGG: yen:YE0004 hypothetical protein; hypothetical protein 4368389 5603818 Spro_3943 Serratia proteamaculans 568 hypothetical protein YP_001480166.1 4367721 D 399741 CDS YP_001480167.1 157372178 5603819 complement(4368446..4369525) 1 NC_009832.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 4369525 5603819 Spro_3944 Serratia proteamaculans 568 fructose-bisphosphate aldolase YP_001480167.1 4368446 R 399741 CDS YP_001480168.1 157372179 5603820 complement(4369641..4370801) 1 NC_009832.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 4370801 pgk 5603820 pgk Serratia proteamaculans 568 phosphoglycerate kinase YP_001480168.1 4369641 R 399741 CDS YP_001480169.1 157372180 5603821 complement(4370879..4371895) 1 NC_009832.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 4371895 5603821 Spro_3946 Serratia proteamaculans 568 erythrose 4-phosphate dehydrogenase YP_001480169.1 4370879 R 399741 CDS YP_001480170.1 157372181 5603758 complement(4372264..4373334) 1 NC_009832.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: yps:YPTB2770 probable ABC transporter, ATP-binding subunit; ABC transporter-like protein 4373334 5603758 Spro_3947 Serratia proteamaculans 568 ABC transporter-like protein YP_001480170.1 4372264 R 399741 CDS YP_001480171.1 157372182 5603759 complement(4373327..4375096) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_1259 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 4375096 5603759 Spro_3948 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001480171.1 4373327 R 399741 CDS YP_001480172.1 157372183 5603760 complement(4375175..4376263) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: yps:YPTB2772 putative ABC transporter, periplasmmic iron binding protein; extracellular solute-binding protein 4376263 5603760 Spro_3949 Serratia proteamaculans 568 extracellular solute-binding protein YP_001480172.1 4375175 R 399741 CDS YP_001480173.1 157372184 5602993 complement(4376434..4377351) 1 NC_009832.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aav:Aave_1958 protein of unknown function DUF6, transmembrane; hypothetical protein 4377351 5602993 Spro_3950 Serratia proteamaculans 568 hypothetical protein YP_001480173.1 4376434 R 399741 CDS YP_001480174.1 157372185 5602994 4377647..4377985 1 NC_009832.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: bcy:Bcer98_3652 export-related chaperone CsaA; export-related chaperone CsaA 4377985 5602994 Spro_3951 Serratia proteamaculans 568 export-related chaperone CsaA YP_001480174.1 4377647 D 399741 CDS YP_001480175.1 157372186 5602995 4378022..4378903 1 NC_009832.1 KEGG: aor:AO090026000386 predicted protein; hypothetical protein 4378903 5602995 Spro_3952 Serratia proteamaculans 568 hypothetical protein YP_001480175.1 4378022 D 399741 CDS YP_001480176.1 157372187 5603717 4379129..4380448 1 NC_009832.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: yen:YE3179 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 4380448 5603717 Spro_3953 Serratia proteamaculans 568 branched-chain amino acid transport system II carrier protein YP_001480176.1 4379129 D 399741 CDS YP_001480177.1 157372188 5603718 complement(4380502..4382496) 1 NC_009832.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 4382496 5603718 Spro_3954 Serratia proteamaculans 568 transketolase YP_001480177.1 4380502 R 399741 CDS YP_001480178.1 157372189 5603719 4382735..4383487 1 NC_009832.1 PFAM: peptidase M48 Ste24p; KEGG: ypi:YpsIP31758_0845 peptidase, M48 family; peptidase M48 Ste24p 4383487 5603719 Spro_3955 Serratia proteamaculans 568 peptidase M48 Ste24p YP_001480178.1 4382735 D 399741 CDS YP_001480179.1 157372190 5603711 complement(4384429..4386072) 1 NC_009832.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: kpn:KPN_03360 putative pyruvate decarboxylase; hypothetical protein 4386072 5603711 Spro_3956 Serratia proteamaculans 568 hypothetical protein YP_001480179.1 4384429 R 399741 CDS YP_001480180.1 157372191 5603712 complement(4386119..4387588) 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: kpn:KPN_03361 putative aldehyde dehydrogenase; aldehyde dehydrogenase 4387588 5603712 Spro_3957 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001480180.1 4386119 R 399741 CDS YP_001480181.1 157372192 5603713 complement(4387604..4388398) 1 NC_009832.1 catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase 4388398 5603713 Spro_3958 Serratia proteamaculans 568 L-aspartate dehydrogenase YP_001480181.1 4387604 R 399741 CDS YP_001480182.1 157372193 5603649 complement(4388416..4389210) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kpn:KPN_03363 putative short-chain dehydrogenase; short chain dehydrogenase 4389210 5603649 Spro_3959 Serratia proteamaculans 568 short chain dehydrogenase YP_001480182.1 4388416 R 399741 CDS YP_001480183.1 157372194 5603650 complement(4389207..4390025) 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: csa:Csal_0139 alpha/beta hydrolase; alpha/beta hydrolase fold domain-containing protein 4390025 5603650 Spro_3960 Serratia proteamaculans 568 alpha/beta hydrolase fold domain-containing protein YP_001480183.1 4389207 R 399741 CDS YP_001480184.1 157372195 5603651 complement(4390025..4390549) 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: csa:Csal_0138 cupin 2 protein; cupin 2 domain-containing protein 4390549 5603651 Spro_3961 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001480184.1 4390025 R 399741 CDS YP_001480185.1 157372196 5603614 complement(4390581..4391843) 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03365 putative permease (MFS superfamily); major facilitator transporter 4391843 5603614 Spro_3962 Serratia proteamaculans 568 major facilitator transporter YP_001480185.1 4390581 R 399741 CDS YP_001480186.1 157372197 5603615 complement(4391868..4393079) 1 NC_009832.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: kpn:KPN_03366 putative ferredoxin reductase subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4393079 5603615 Spro_3963 Serratia proteamaculans 568 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001480186.1 4391868 R 399741 CDS YP_001480187.1 157372198 5603616 complement(4393076..4394086) 1 NC_009832.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: kpn:KPN_03367 putative glyoxalase/bleomycin resistance protein/dioxygenas; glyoxalase/bleomycin resistance protein/dioxygenase 4394086 5603616 Spro_3964 Serratia proteamaculans 568 glyoxalase/bleomycin resistance protein/dioxygenase YP_001480187.1 4393076 R 399741 CDS YP_001480188.1 157372199 5603544 complement(4394128..4394922) 1 NC_009832.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: kpn:KPN_03368 putative bacterial regulatory proteins, IclR; IclR family transcriptional regulator 4394922 5603544 Spro_3965 Serratia proteamaculans 568 IclR family transcriptional regulator YP_001480188.1 4394128 R 399741 CDS YP_001480189.1 157372200 5603545 complement(4394951..4395706) 1 NC_009832.1 member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase 4395706 5603545 Spro_3966 Serratia proteamaculans 568 short chain dehydrogenase YP_001480189.1 4394951 R 399741 CDS YP_001480190.1 157372201 5603546 complement(4395703..4396746) 1 NC_009832.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: kpn:KPN_03370 3-phenylpropionate dioxygenase, alpha subunit; Rieske (2Fe-2S) domain-containing protein 4396746 5603546 Spro_3967 Serratia proteamaculans 568 Rieske (2Fe-2S) domain-containing protein YP_001480190.1 4395703 R 399741 CDS YP_001480191.1 157372202 5603535 complement(4396767..4397075) 1 NC_009832.1 KEGG: csa:Csal_0131 hypothetical protein; hypothetical protein 4397075 5603535 Spro_3968 Serratia proteamaculans 568 hypothetical protein YP_001480191.1 4396767 R 399741 CDS YP_001480192.1 157372203 5603536 complement(4397078..4397395) 1 NC_009832.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: kpn:KPN_03371 putative ferredoxin; Rieske (2Fe-2S) domain-containing protein 4397395 5603536 Spro_3969 Serratia proteamaculans 568 Rieske (2Fe-2S) domain-containing protein YP_001480192.1 4397078 R 399741 CDS YP_001480193.1 157372204 5603537 4397790..4399037 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_03372 putative transport protein; major facilitator transporter 4399037 5603537 Spro_3970 Serratia proteamaculans 568 major facilitator transporter YP_001480193.1 4397790 D 399741 CDS YP_001480194.1 157372205 5603148 complement(4399088..4399948) 1 NC_009832.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 4399948 5603148 Spro_3971 Serratia proteamaculans 568 23S rRNA pseudouridine synthase F YP_001480194.1 4399088 R 399741 CDS YP_001480195.1 157372206 5603149 complement(4400159..4401079) 1 NC_009832.1 catalyzes the formation of putrescine from agmatine; agmatinase 4401079 5603149 Spro_3972 Serratia proteamaculans 568 agmatinase YP_001480195.1 4400159 R 399741 CDS YP_001480196.1 157372207 5603150 complement(4401850..4403826) 1 NC_009832.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 4403826 5603150 Spro_3973 Serratia proteamaculans 568 arginine decarboxylase YP_001480196.1 4401850 R 399741 CDS YP_001480197.1 157372208 5603081 4404720..4405874 1 NC_009832.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4405874 5603081 Spro_3974 Serratia proteamaculans 568 S-adenosylmethionine synthetase YP_001480197.1 4404720 D 399741 CDS YP_001480198.1 157372209 5603082 complement(4406001..4406123) 1 NC_009832.1 PFAM: Hok/gef cell toxic protein; KEGG: sty:HCM1.290c putative stable plasmid inheritance protein; Hok/gef cell toxic protein 4406123 5603082 Spro_3975 Serratia proteamaculans 568 Hok/gef cell toxic protein YP_001480198.1 4406001 R 399741 CDS YP_001480199.1 157372210 5603083 complement(4406470..4408458) 1 NC_009832.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease 4408458 5603083 Spro_3976 Serratia proteamaculans 568 iron-hydroxamate transporter permease YP_001480199.1 4406470 R 399741 CDS YP_001480200.1 157372211 5602979 complement(4408455..4409363) 1 NC_009832.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 4409363 5602979 Spro_3977 Serratia proteamaculans 568 iron-hydroxamate transporter substrate-binding subunit YP_001480200.1 4408455 R 399741 CDS YP_001480201.1 157372212 5602980 complement(4409363..4410160) 1 NC_009832.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 4410160 5602980 Spro_3978 Serratia proteamaculans 568 iron-hydroxamate transporter ATP-binding subunit YP_001480201.1 4409363 R 399741 CDS YP_001480202.1 157372213 5602981 complement(4410208..4412397) 1 NC_009832.1 involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; ferrichrome outer membrane transporter 4412397 5602981 Spro_3979 Serratia proteamaculans 568 ferrichrome outer membrane transporter YP_001480202.1 4410208 R 399741 CDS YP_001480203.1 157372214 5602870 complement(4412620..4414014) 1 NC_009832.1 KEGG: sec:SC4187 putative periplasmic or exported protein; putative periplasmic or exported protein 4414014 5602870 Spro_3980 Serratia proteamaculans 568 putative periplasmic or exported protein YP_001480203.1 4412620 R 399741 CDS YP_001480204.1 157372215 5602871 complement(4414196..4416706) 1 NC_009832.1 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 4416706 mrcB 5602871 mrcB Serratia proteamaculans 568 penicillin-binding protein 1b YP_001480204.1 4414196 R 399741 CDS YP_001480205.1 157372216 5602872 complement(4416806..4419244) 1 NC_009832.1 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 4419244 5602872 Spro_3982 Serratia proteamaculans 568 ATP-dependent RNA helicase HrpB YP_001480205.1 4416806 R 399741 CDS YP_001480206.1 157372217 5602859 4419324..4419866 1 NC_009832.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: eca:ECA3315 2'-5' RNA ligase; 2'-5' RNA ligase 4419866 5602859 Spro_3983 Serratia proteamaculans 568 2'-5' RNA ligase YP_001480206.1 4419324 D 399741 CDS YP_001480207.1 157372218 5602860 4419863..4420570 1 NC_009832.1 PFAM: sugar fermentation stimulation protein; KEGG: ypi:YpsIP31758_3337 sugar fermentation stimulation protein; sugar fermentation stimulation protein 4420570 5602860 Spro_3984 Serratia proteamaculans 568 sugar fermentation stimulation protein YP_001480207.1 4419863 D 399741 CDS YP_001480208.1 157372219 5602861 4420754..4421209 1 NC_009832.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: kpn:KPN_00145 DnaK suppressor protein; RNA polymerase-binding transcription factor 4421209 dksA 5602861 dksA Serratia proteamaculans 568 RNA polymerase-binding transcription factor YP_001480208.1 4420754 D 399741 CDS YP_001480209.1 157372220 5602803 4421281..4422192 1 NC_009832.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: ypi:YpsIP31758_3339 glutamyl-Q tRNA(Asp) synthetase; glutamate--tRNA ligase 4422192 5602803 Spro_3986 Serratia proteamaculans 568 glutamate--tRNA ligase YP_001480209.1 4421281 D 399741 CDS YP_001480210.1 157372221 5602804 4422287..4423804 1 NC_009832.1 Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I 4423804 pcnB 5602804 pcnB Serratia proteamaculans 568 poly(A) polymerase I YP_001480210.1 4422287 D 399741 CDS YP_001480211.1 157372222 5602805 4423804..4424304 1 NC_009832.1 KEGG: ypi:YpsIP31758_3341 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 4424304 5602805 Spro_3988 Serratia proteamaculans 568 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001480211.1 4423804 D 399741 CDS YP_001480212.1 157372223 5602798 complement(4424331..4425689) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: eca:ECA0007 two-component system sensor kinase; sensor protein QseC 4425689 5602798 Spro_3989 Serratia proteamaculans 568 sensor protein QseC YP_001480212.1 4424331 R 399741 CDS YP_001480213.1 157372224 5602799 complement(4425686..4426348) 1 NC_009832.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eca:ECA0008 two-component system response regulator; two component transcriptional regulator 4426348 5602799 Spro_3990 Serratia proteamaculans 568 two component transcriptional regulator YP_001480213.1 4425686 R 399741 CDS YP_001480214.1 157372225 5602800 4426452..4427312 1 NC_009832.1 KEGG: ypk:y0786 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 4427312 5602800 Spro_3991 Serratia proteamaculans 568 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001480214.1 4426452 D 399741 CDS YP_001480215.1 157372226 5602643 4427337..4428191 1 NC_009832.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 4428191 panC 5602643 panC Serratia proteamaculans 568 pantoate--beta-alanine ligase YP_001480215.1 4427337 D 399741 CDS YP_001480216.1 157372227 5602644 4428414..4428794 1 NC_009832.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 4428794 5602644 Spro_3993 Serratia proteamaculans 568 aspartate alpha-decarboxylase YP_001480216.1 4428414 D 399741 CDS YP_001480217.1 157372228 5602645 complement(4428834..4430114) 1 NC_009832.1 PFAM: polysaccharide deacetylase; KEGG: ypi:YpsIP31758_3346 polysaccharide deacetylase family protein; polysaccharide deacetylase 4430114 5602645 Spro_3994 Serratia proteamaculans 568 polysaccharide deacetylase YP_001480217.1 4428834 R 399741 CDS YP_001480218.1 157372229 5602579 complement(4430336..4431106) 1 NC_009832.1 PFAM: ABC-2 type transporter; KEGG: eca:ECA3324 ABC transporter integral membrane protein; ABC-2 type transporter 4431106 5602579 Spro_3995 Serratia proteamaculans 568 ABC-2 type transporter YP_001480218.1 4430336 R 399741 CDS YP_001480219.1 157372230 5602580 complement(4431103..4432026) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE0715 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 4432026 5602580 Spro_3996 Serratia proteamaculans 568 ABC transporter-like protein YP_001480219.1 4431103 R 399741 CDS YP_001480220.1 157372231 5602581 4432263..4432919 1 NC_009832.1 PFAM: carbonic anhydrase; KEGG: eca:ECA3327 putative carbonic anhydrase; carbonate dehydratase 4432919 5602581 Spro_3997 Serratia proteamaculans 568 carbonate dehydratase YP_001480220.1 4432263 D 399741 CDS YP_001480221.1 157372232 5602540 complement(4432957..4433493) 1 NC_009832.1 KEGG: yps:YPTB0723 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 4433493 5602540 Spro_3998 Serratia proteamaculans 568 hypoxanthine phosphoribosyltransferase YP_001480221.1 4432957 R 399741 CDS YP_001480222.1 157372233 5602541 complement(4433592..4435211) 1 NC_009832.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 4435211 5602541 Spro_3999 Serratia proteamaculans 568 multicopper oxidase YP_001480222.1 4433592 R 399741 CDS YP_001480223.1 157372234 5602542 4435430..4435780 1 NC_009832.1 KEGG: yen:YE0711 hypothetical protein; hypothetical protein 4435780 5602542 Spro_4000 Serratia proteamaculans 568 hypothetical protein YP_001480223.1 4435430 D 399741 CDS YP_001480224.1 157372235 5604427 4435891..4436754 1 NC_009832.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 4436754 5604427 Spro_4001 Serratia proteamaculans 568 spermidine synthase YP_001480224.1 4435891 D 399741 CDS YP_001480225.1 157372236 5604428 4436782..4437576 1 NC_009832.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 4437576 5604428 Spro_4002 Serratia proteamaculans 568 S-adenosylmethionine decarboxylase YP_001480225.1 4436782 D 399741 CDS YP_001480226.1 157372237 5604429 4437764..4438663 1 NC_009832.1 KEGG: yen:YE1045 DNA-binding protein; GntR family transcriptional regulator 4438663 5604429 Spro_4003 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001480226.1 4437764 D 399741 CDS YP_001480227.1 157372238 5605050 4438679..4439047 1 NC_009832.1 PFAM: PRD domain protein; KEGG: yen:YE3102 hypothetical protein; PRD domain-containing protein 4439047 5605050 Spro_4004 Serratia proteamaculans 568 PRD domain-containing protein YP_001480227.1 4438679 D 399741 CDS YP_001480228.1 157372239 5605051 4439108..4440274 1 NC_009832.1 PFAM: alanine racemase domain protein; KEGG: yen:YE3103 hypothetical protein; alanine racemase domain-containing protein 4440274 5605051 Spro_4005 Serratia proteamaculans 568 alanine racemase domain-containing protein YP_001480228.1 4439108 D 399741 CDS YP_001480229.1 157372240 5605052 4440267..4441502 1 NC_009832.1 PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein; KEGG: yen:YE3104 metalloenzyme superfamily protein; putative mutase 4441502 5605052 Spro_4006 Serratia proteamaculans 568 putative mutase YP_001480229.1 4440267 D 399741 CDS YP_001480230.1 157372241 5604481 complement(4441546..4441908) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE0706 hypothetical protein; hypothetical protein 4441908 5604481 Spro_4007 Serratia proteamaculans 568 hypothetical protein YP_001480230.1 4441546 R 399741 CDS YP_001480231.1 157372242 5604482 complement(4442048..4444645) 1 NC_009832.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 4444645 5604482 Spro_4008 Serratia proteamaculans 568 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001480231.1 4442048 R 399741 CDS YP_001480232.1 157372243 5604483 complement(4445071..4446495) 1 NC_009832.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 4446495 5604483 Spro_4009 Serratia proteamaculans 568 dihydrolipoamide dehydrogenase YP_001480232.1 4445071 R 399741 CDS YP_001480233.1 157372244 5604672 complement(4446729..4448621) 1 NC_009832.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 4448621 aceF 5604672 aceF Serratia proteamaculans 568 dihydrolipoamide acetyltransferase YP_001480233.1 4446729 R 399741 CDS YP_001480234.1 157372245 5604673 complement(4448635..4451298) 1 NC_009832.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4451298 aceE 5604673 aceE Serratia proteamaculans 568 pyruvate dehydrogenase subunit E1 YP_001480234.1 4448635 R 399741 CDS YP_001480235.1 157372246 5604674 complement(4451469..4452233) 1 NC_009832.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 4452233 pdhR 5604674 pdhR Serratia proteamaculans 568 transcriptional regulator PdhR YP_001480235.1 4451469 R 399741 CDS YP_001480236.1 157372247 5604750 4452867..4454249 1 NC_009832.1 PFAM: amino acid permease-associated region; KEGG: yen:YE0695 aromatic amino acid transport protein; amino acid permease-associated protein 4454249 5604750 Spro_4013 Serratia proteamaculans 568 amino acid permease-associated protein YP_001480236.1 4452867 D 399741 CDS YP_001480237.1 157372248 5604751 4454446..4455846 1 NC_009832.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA3792 hypothetical protein; sugar (glycoside-Pentoside-hexuronide) transporter 4455846 5604751 Spro_4014 Serratia proteamaculans 568 sugar (glycoside-Pentoside-hexuronide) transporter YP_001480237.1 4454446 D 399741 CDS YP_001480238.1 157372249 5604752 4455857..4456807 1 NC_009832.1 PFAM: glycoside hydrolase family 43; KEGG: eca:ECA3793 putatuve glycosysl hydrolase; alpha-N-arabinofuranosidase 4456807 5604752 Spro_4015 Serratia proteamaculans 568 alpha-N-arabinofuranosidase YP_001480238.1 4455857 D 399741 CDS YP_001480239.1 157372250 5605011 complement(4457006..4458241) 1 NC_009832.1 PFAM: cytochrome c class I; KEGG: rme:Rmet_1417 cytochrome c, class I; gluconate 2-dehydrogenase 4458241 5605011 Spro_4016 Serratia proteamaculans 568 gluconate 2-dehydrogenase YP_001480239.1 4457006 R 399741 CDS YP_001480240.1 157372251 5605012 complement(4458238..4458792) 1 NC_009832.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rme:Rmet_1416 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster binding domain-containing protein 4458792 5605012 Spro_4017 Serratia proteamaculans 568 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001480240.1 4458238 R 399741 CDS YP_001480241.1 157372252 5605013 complement(4458789..4461578) 1 NC_009832.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase; aldehyde oxidase and xanthine dehydrogenase 4461578 5605013 Spro_4018 Serratia proteamaculans 568 aldehyde oxidase and xanthine dehydrogenase YP_001480241.1 4458789 R 399741 CDS YP_001480242.1 157372253 5605008 4461783..4462367 1 NC_009832.1 KEGG: pfo:Pfl_4167 hypothetical protein; hypothetical protein 4462367 5605008 Spro_4019 Serratia proteamaculans 568 hypothetical protein YP_001480242.1 4461783 D 399741 CDS YP_001480243.1 157372254 5605009 4462375..4463427 1 NC_009832.1 PFAM: protein of unknown function DUF182; KEGG: ppf:Pput_1633 protein of unknown function DUF182; hypothetical protein 4463427 5605009 Spro_4020 Serratia proteamaculans 568 hypothetical protein YP_001480243.1 4462375 D 399741 CDS YP_001480244.1 157372255 5605010 complement(4463351..4464217) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein; AraC family transcriptional regulator 4464217 5605010 Spro_4021 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001480244.1 4463351 R 399741 CDS YP_001480245.1 157372256 5603206 complement(4464387..4466033) 1 NC_009832.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: sfv:SFV_1628 fumarate hydratase class I, aerobic; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 4466033 5603206 Spro_4022 Serratia proteamaculans 568 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta YP_001480245.1 4464387 R 399741 CDS YP_001480246.1 157372257 5603207 4466404..4466916 1 NC_009832.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: yen:YE3424 hypothetical protein; hypothetical protein 4466916 5603207 Spro_4023 Serratia proteamaculans 568 hypothetical protein YP_001480246.1 4466404 D 399741 CDS YP_001480247.1 157372258 5603208 4467018..4467713 1 NC_009832.1 PFAM: Endonuclease I; KEGG: ypi:YpsIP31758_0839 endonuclease I; deoxyribonuclease I 4467713 5603208 Spro_4024 Serratia proteamaculans 568 deoxyribonuclease I YP_001480247.1 4467018 D 399741 CDS YP_001480248.1 157372259 5605377 4467901..4468632 1 NC_009832.1 PFAM: protein of unknown function DUF558; KEGG: ecv:APECO1_3575 hypothetical protein; hypothetical protein 4468632 5605377 Spro_4025 Serratia proteamaculans 568 hypothetical protein YP_001480248.1 4467901 D 399741 CDS YP_001480249.1 157372260 5605378 4468643..4469593 1 NC_009832.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4469593 5605378 Spro_4026 Serratia proteamaculans 568 glutathione synthetase YP_001480249.1 4468643 D 399741 CDS YP_001480250.1 157372261 5605379 4469726..4470289 1 NC_009832.1 PFAM: protein of unknown function DUF179; KEGG: sgl:SG2023 hypothetical protein; hypothetical protein 4470289 5605379 Spro_4027 Serratia proteamaculans 568 hypothetical protein YP_001480250.1 4469726 D 399741 CDS YP_001480251.1 157372262 5605521 4470289..4470711 1 NC_009832.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4470711 5605521 Spro_4028 Serratia proteamaculans 568 Holliday junction resolvase-like protein YP_001480251.1 4470289 D 399741 CDS YP_001480252.1 157372263 5605522 complement(4470708..4471730) 1 NC_009832.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: eca:ECA3626 putative type II/IV secretion system protein; twitching motility protein 4471730 5605522 Spro_4029 Serratia proteamaculans 568 twitching motility protein YP_001480252.1 4470708 R 399741 CDS YP_001480253.1 157372264 5605523 4471751..4472458 1 NC_009832.1 PFAM: alanine racemase domain protein; KEGG: yps:YPTB3213 hypothetical protein; alanine racemase domain-containing protein 4472458 5605523 Spro_4030 Serratia proteamaculans 568 alanine racemase domain-containing protein YP_001480253.1 4471751 D 399741 CDS YP_001480254.1 157372265 5605552 4472479..4473300 1 NC_009832.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4473300 5605552 Spro_4031 Serratia proteamaculans 568 pyrroline-5-carboxylate reductase YP_001480254.1 4472479 D 399741 CDS YP_001480255.1 157372266 5605553 4473332..4473886 1 NC_009832.1 PFAM: protein of unknown function YGGT; KEGG: yen:YE3435 hypothetical protein; hypothetical protein 4473886 5605553 Spro_4032 Serratia proteamaculans 568 hypothetical protein YP_001480255.1 4473332 D 399741 CDS YP_001480256.1 157372267 5605554 4473883..4474173 1 NC_009832.1 PFAM: protein of unknown function DUF167; KEGG: yen:YE3436 hypothetical protein; hypothetical protein 4474173 5605554 Spro_4033 Serratia proteamaculans 568 hypothetical protein YP_001480256.1 4473883 D 399741 CDS YP_001480257.1 157372268 5605575 4474191..4474784 1 NC_009832.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 4474784 5605575 Spro_4034 Serratia proteamaculans 568 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001480257.1 4474191 D 399741 CDS YP_001480258.1 157372269 5605576 4474777..4475916 1 NC_009832.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4475916 5605576 Spro_4035 Serratia proteamaculans 568 coproporphyrinogen III oxidase YP_001480258.1 4474777 D 399741 CDS YP_001480259.1 157372270 5605577 complement(4475952..4476386) 1 NC_009832.1 PFAM: protein of unknown function DUF29; KEGG: plu:plu2339 hypothetical protein; hypothetical protein 4476386 5605577 Spro_4036 Serratia proteamaculans 568 hypothetical protein YP_001480259.1 4475952 R 399741 CDS YP_001480260.1 157372271 5605757 complement(4476412..4476660) 1 NC_009832.1 KEGG: yen:YE3508 hypothetical protein; hypothetical protein 4476660 5605757 Spro_4037 Serratia proteamaculans 568 hypothetical protein YP_001480260.1 4476412 R 399741 CDS YP_001480261.1 157372272 5605758 complement(4476644..4476889) 1 NC_009832.1 KEGG: jan:Jann_3434 hypothetical protein; hypothetical protein 4476889 5605758 Spro_4038 Serratia proteamaculans 568 hypothetical protein YP_001480261.1 4476644 R 399741 CDS YP_001480262.1 157372273 5605759 complement(4476983..4477699) 1 NC_009832.1 KEGG: yen:YE3439 hypothetical protein; hypothetical protein 4477699 5605759 Spro_4039 Serratia proteamaculans 568 hypothetical protein YP_001480262.1 4476983 R 399741 CDS YP_001480263.1 157372274 5605792 complement(4477730..4478653) 1 NC_009832.1 catalyzes the formation of glutamate from glutamine; glutaminase 4478653 5605792 Spro_4040 Serratia proteamaculans 568 glutaminase YP_001480263.1 4477730 R 399741 CDS YP_001480264.1 157372275 5605793 complement(4478737..4479063) 1 NC_009832.1 PFAM: protein of unknown function DUF469; KEGG: yen:YE3441 hypothetical protein; hypothetical protein 4479063 5605793 Spro_4041 Serratia proteamaculans 568 hypothetical protein YP_001480264.1 4478737 R 399741 CDS YP_001480265.1 157372276 5605794 complement(4479063..4479782) 1 NC_009832.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 4479782 trmB 5605794 trmB Serratia proteamaculans 568 tRNA (guanine-N(7)-)-methyltransferase YP_001480265.1 4479063 R 399741 CDS YP_001480266.1 157372277 5606034 4479915..4481060 1 NC_009832.1 KEGG: yen:YE3443 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; adenine DNA glycosylase 4481060 5606034 Spro_4043 Serratia proteamaculans 568 adenine DNA glycosylase YP_001480266.1 4479915 D 399741 CDS YP_001480267.1 157372278 5606035 4481057..4481329 1 NC_009832.1 PFAM: Fe(II) trafficking protein YggX; KEGG: eca:ECA0975 hypothetical protein; hypothetical protein 4481329 5606035 Spro_4044 Serratia proteamaculans 568 hypothetical protein YP_001480267.1 4481057 D 399741 CDS YP_001480268.1 157372279 5606036 4481385..4482461 1 NC_009832.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 4482461 mltC 5606036 mltC Serratia proteamaculans 568 murein transglycosylase C YP_001480268.1 4481385 D 399741 CDS YP_001480269.1 157372280 5606068 complement(4482509..4483621) 1 NC_009832.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: asa:ASA_3304 GGDEF domain protein; diguanylate cyclase 4483621 5606068 Spro_4046 Serratia proteamaculans 568 diguanylate cyclase YP_001480269.1 4482509 R 399741 CDS YP_001480270.1 157372281 5606069 complement(4483726..4485888) 1 NC_009832.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ypp:YPDSF_0554 ornithine decarboxylase; ornithine decarboxylase 4485888 5606069 Spro_4047 Serratia proteamaculans 568 ornithine decarboxylase YP_001480270.1 4483726 R 399741 CDS YP_001480271.1 157372282 5606658 complement(4486861..4487892) 1 NC_009832.1 PFAM: integrase family protein; KEGG: eca:ECA0614 putative phage integrase; integrase family protein 4487892 5606658 Spro_4048 Serratia proteamaculans 568 integrase family protein YP_001480271.1 4486861 R 399741 CDS YP_001480272.1 157372283 5606219 complement(4487979..4489661) 1 NC_009832.1 PFAM: protein of unknown function DUF1528; Relaxase; KEGG: eca:ECA0613 hypothetical protein; relaxase 4489661 5606219 Spro_4049 Serratia proteamaculans 568 relaxase YP_001480272.1 4487979 R 399741 CDS YP_001480273.1 157372284 5606220 complement(4489655..4491100) 1 NC_009832.1 KEGG: eca:ECA0611 hypothetical protein; hypothetical protein 4491100 5606220 Spro_4050 Serratia proteamaculans 568 hypothetical protein YP_001480273.1 4489655 R 399741 CDS YP_001480274.1 157372285 5606221 4491753..4492586 1 NC_009832.1 PFAM: response regulator receiver; BetR domain protein; KEGG: sec:SC042 hypothetical protein; response regulator receiver protein 4492586 5606221 Spro_4051 Serratia proteamaculans 568 response regulator receiver protein YP_001480274.1 4491753 D 399741 CDS YP_001480275.1 157372286 5602873 4492593..4493579 1 NC_009832.1 KEGG: sec:SC041 hypothetical protein; hypothetical protein 4493579 5602873 Spro_4052 Serratia proteamaculans 568 hypothetical protein YP_001480275.1 4492593 D 399741 CDS YP_001480276.1 157372287 5602874 4493572..4494075 1 NC_009832.1 KEGG: sec:SC040 hypothetical protein; hypothetical protein 4494075 5602874 Spro_4053 Serratia proteamaculans 568 hypothetical protein YP_001480276.1 4493572 D 399741 CDS YP_001480277.1 157372288 5602875 4494141..4495784 1 NC_009832.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sec:SC039 hypothetical protein; histidine kinase 4495784 5602875 Spro_4054 Serratia proteamaculans 568 histidine kinase YP_001480277.1 4494141 D 399741 CDS YP_001480278.1 157372289 5605648 complement(4495841..4496407) 1 NC_009832.1 KEGG: plu:plu1163 hypothetical protein; hypothetical protein 4496407 5605648 Spro_4055 Serratia proteamaculans 568 hypothetical protein YP_001480278.1 4495841 R 399741 CDS YP_001480279.1 157372290 5605649 complement(4496635..4497576) 1 NC_009832.1 PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein 4497576 5605649 Spro_4056 Serratia proteamaculans 568 hypothetical protein YP_001480279.1 4496635 R 399741 CDS YP_001480280.1 157372291 5605650 complement(4497683..4497955) 1 NC_009832.1 KEGG: yen:YE3459 hypothetical protein; hypothetical protein 4497955 5605650 Spro_4057 Serratia proteamaculans 568 hypothetical protein YP_001480280.1 4497683 R 399741 CDS YP_001480281.1 157372292 5603275 complement(4497973..4498983) 1 NC_009832.1 PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein 4498983 5603275 Spro_4058 Serratia proteamaculans 568 hypothetical protein YP_001480281.1 4497973 R 399741 CDS YP_001480282.1 157372293 5603276 complement(4499057..4499659) 1 NC_009832.1 KEGG: stt:t4289 hypothetical protein; hypothetical protein 4499659 5603276 Spro_4059 Serratia proteamaculans 568 hypothetical protein YP_001480282.1 4499057 R 399741 CDS YP_001480283.1 157372294 5603277 complement(4499792..4500415) 1 NC_009832.1 hypothetical protein 4500415 5603277 Spro_4060 Serratia proteamaculans 568 hypothetical protein YP_001480283.1 4499792 R 399741 CDS YP_001480284.1 157372295 5602491 complement(4500437..4500853) 1 NC_009832.1 KEGG: stt:t4282 hypothetical protein; hypothetical protein 4500853 5602491 Spro_4061 Serratia proteamaculans 568 hypothetical protein YP_001480284.1 4500437 R 399741 CDS YP_001480285.1 157372296 5602492 complement(4501784..4502683) 1 NC_009832.1 KEGG: plu:plu1152 hypothetical protein; hypothetical protein 4502683 5602492 Spro_4062 Serratia proteamaculans 568 hypothetical protein YP_001480285.1 4501784 R 399741 CDS YP_001480286.1 157372297 5602493 complement(4503782..4504357) 1 NC_009832.1 hypothetical protein 4504357 5602493 Spro_4063 Serratia proteamaculans 568 hypothetical protein YP_001480286.1 4503782 R 399741 CDS YP_001480287.1 157372298 5602458 complement(4504695..4505105) 1 NC_009832.1 KEGG: stt:t4291 UV protection protein; UV protection protein 4505105 5602458 Spro_4064 Serratia proteamaculans 568 UV protection protein YP_001480287.1 4504695 R 399741 CDS YP_001480288.1 157372299 5602459 4505384..4506190 1 NC_009832.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gbe:GbCGDNIH1_1880 hydrolase (HAD superfamily); HAD family hydrolase 4506190 5602459 Spro_4065 Serratia proteamaculans 568 HAD family hydrolase YP_001480288.1 4505384 D 399741 CDS YP_001480289.1 157372300 5602460 4506235..4507314 1 NC_009832.1 KEGG: mlo:mll9370 hypothetical protein; hypothetical protein 4507314 5602460 Spro_4066 Serratia proteamaculans 568 hypothetical protein YP_001480289.1 4506235 D 399741 CDS YP_001480290.1 157372301 5604775 4507307..4508680 1 NC_009832.1 PFAM: aminotransferase class I and II; KEGG: bha:BH1695 aspartate aminotransferase; class I and II aminotransferase 4508680 5604775 Spro_4067 Serratia proteamaculans 568 class I and II aminotransferase YP_001480290.1 4507307 D 399741 CDS YP_001480291.1 157372302 5604776 4508690..4509931 1 NC_009832.1 PFAM: protein of unknown function DUF201; KEGG: gka:GK2762 hypothetical protein; hypothetical protein 4509931 5604776 Spro_4068 Serratia proteamaculans 568 hypothetical protein YP_001480291.1 4508690 D 399741 CDS YP_001480292.1 157372303 5604777 4509963..4511132 1 NC_009832.1 KEGG: bca:BCE_A0170 phosphoribosylglycinamide synthetase, ATP-grasp (A) domain protein; phosphoribosylglycinamide synthetase ATP-grasp domain-containing protein 4511132 5604777 Spro_4069 Serratia proteamaculans 568 phosphoribosylglycinamide synthetase ATP-grasp domain-containing protein YP_001480292.1 4509963 D 399741 CDS YP_001480293.1 157372304 5606896 4511190..4512386 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_3150 possible membrane protein; TGF-beta receptor, type I/II extracellular region; major facilitator transporter 4512386 5606896 Spro_4070 Serratia proteamaculans 568 major facilitator transporter YP_001480293.1 4511190 D 399741 CDS YP_001480294.1 157372305 5606897 complement(4513706..4515244) 1 NC_009832.1 KEGG: eca:ECA0580 hypothetical protein; hypothetical protein 4515244 5606897 Spro_4071 Serratia proteamaculans 568 hypothetical protein YP_001480294.1 4513706 R 399741 CDS YP_001480295.1 157372306 5606898 complement(4515241..4515612) 1 NC_009832.1 KEGG: eca:ECA0579 hypothetical protein; hypothetical protein 4515612 5606898 Spro_4072 Serratia proteamaculans 568 hypothetical protein YP_001480295.1 4515241 R 399741 CDS YP_001480296.1 157372307 5606352 complement(4515629..4517110) 1 NC_009832.1 KEGG: eca:ECA0578 hypothetical protein; hypothetical protein 4517110 5606352 Spro_4073 Serratia proteamaculans 568 hypothetical protein YP_001480296.1 4515629 R 399741 CDS YP_001480297.1 157372308 5606353 complement(4517121..4518128) 1 NC_009832.1 PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein 4518128 5606353 Spro_4074 Serratia proteamaculans 568 hypothetical protein YP_001480297.1 4517121 R 399741 CDS YP_001480298.1 157372309 5606354 complement(4518130..4518534) 1 NC_009832.1 PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein 4518534 5606354 Spro_4075 Serratia proteamaculans 568 hypothetical protein YP_001480298.1 4518130 R 399741 CDS YP_001480299.1 157372310 5607033 complement(4518986..4520170) 1 NC_009832.1 KEGG: kpn:KPN_01180 putative glycosyl transferase; putative glycosyl transferase 4520170 5607033 Spro_4076 Serratia proteamaculans 568 putative glycosyl transferase YP_001480299.1 4518986 R 399741 CDS YP_001480300.1 157372311 5607034 complement(4521585..4532393) 1 NC_009832.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: ypi:YpsIP31758_0510 adhesin/haemagluttinin repeat protein; filamentous hemagglutinin outer membrane protein 4532393 5607034 Spro_4077 Serratia proteamaculans 568 filamentous hemagglutinin outer membrane protein YP_001480300.1 4521585 R 399741 CDS YP_001480301.1 157372312 5607035 complement(4532462..4534207) 1 NC_009832.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RS02577 probable activation/secretion protein; polypeptide-transport-associated domain-containing protein 4534207 5607035 Spro_4078 Serratia proteamaculans 568 polypeptide-transport-associated domain-containing protein YP_001480301.1 4532462 R 399741 CDS YP_001480302.1 157372313 5606905 4534439..4534702 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: sec:SC174 hypothetical protein A; transposase IS3/IS911 family protein 4534702 5606905 Spro_4079 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001480302.1 4534439 D 399741 CDS YP_001480303.1 157372314 5606906 4534735..4534959 1 NC_009832.1 KEGG: sec:SC173 hypothetical protein B; hypothetical protein 4534959 5606906 Spro_4080 Serratia proteamaculans 568 hypothetical protein YP_001480303.1 4534735 D 399741 CDS YP_001480304.1 157372315 5606907 4534928..4535560 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: ypp:YPDSF_4015 hypothetical protein; Integrase catalytic subunit 4535560 5606907 Spro_4081 Serratia proteamaculans 568 Integrase catalytic subunit YP_001480304.1 4534928 D 399741 CDS YP_001480305.1 157372316 5606979 4535688..4538279 1 NC_009832.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: ypi:YpsIP31758_3536 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 4538279 5606979 Spro_4082 Serratia proteamaculans 568 type I restriction-modification system, M subunit YP_001480305.1 4535688 D 399741 CDS YP_001480306.1 157372317 5606980 4538281..4539510 1 NC_009832.1 PFAM: restriction modification system DNA specificity domain; KEGG: shn:Shewana3_4163 restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 4539510 5606980 Spro_4083 Serratia proteamaculans 568 restriction modification system DNA specificity subunit YP_001480306.1 4538281 D 399741 CDS YP_001480307.1 157372318 5606981 4539525..4542710 1 NC_009832.1 KEGG: shn:Shewana3_4164 type I site-specific deoxyribonuclease, HsdR family; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; HsdR family type I site-specific deoxyribonuclease 4542710 5606981 Spro_4084 Serratia proteamaculans 568 HsdR family type I site-specific deoxyribonuclease YP_001480307.1 4539525 D 399741 CDS YP_001480308.1 157372319 5607114 complement(4542838..4543242) 1 NC_009832.1 KEGG: eca:ECA0574 hypothetical protein; hypothetical protein 4543242 5607114 Spro_4085 Serratia proteamaculans 568 hypothetical protein YP_001480308.1 4542838 R 399741 CDS YP_001480309.1 157372320 5607115 complement(4543239..4546103) 1 NC_009832.1 KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein 4546103 5607115 Spro_4086 Serratia proteamaculans 568 putative plasmid-like protein YP_001480309.1 4543239 R 399741 CDS YP_001480310.1 157372321 5607116 complement(4546103..4546528) 1 NC_009832.1 KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein 4546528 5607116 Spro_4087 Serratia proteamaculans 568 putative lipoprotein YP_001480310.1 4546103 R 399741 CDS YP_001480311.1 157372322 5607121 complement(4546684..4548180) 1 NC_009832.1 KEGG: eca:ECA0570 hypothetical protein; hypothetical protein 4548180 5607121 Spro_4088 Serratia proteamaculans 568 hypothetical protein YP_001480311.1 4546684 R 399741 CDS YP_001480312.1 157372323 5607122 complement(4548173..4549090) 1 NC_009832.1 KEGG: eca:ECA0569 hypothetical protein; hypothetical protein 4549090 5607122 Spro_4089 Serratia proteamaculans 568 hypothetical protein YP_001480312.1 4548173 R 399741 CDS YP_001480313.1 157372324 5607123 complement(4549087..4549758) 1 NC_009832.1 KEGG: eca:ECA0568 hypothetical protein; hypothetical protein 4549758 5607123 Spro_4090 Serratia proteamaculans 568 hypothetical protein YP_001480313.1 4549087 R 399741 CDS YP_001480314.1 157372325 5606162 complement(4549755..4550120) 1 NC_009832.1 KEGG: eca:ECA0567 hypothetical protein; hypothetical protein 4550120 5606162 Spro_4091 Serratia proteamaculans 568 hypothetical protein YP_001480314.1 4549755 R 399741 CDS YP_001480315.1 157372326 5606163 complement(4550132..4550497) 1 NC_009832.1 KEGG: plu:plu1080 hypothetical protein; hypothetical protein 4550497 5606163 Spro_4092 Serratia proteamaculans 568 hypothetical protein YP_001480315.1 4550132 R 399741 CDS YP_001480316.1 157372327 5606164 complement(4550562..4550798) 1 NC_009832.1 KEGG: eca:ECA0565 hypothetical protein; hypothetical protein 4550798 5606164 Spro_4093 Serratia proteamaculans 568 hypothetical protein YP_001480316.1 4550562 R 399741 CDS YP_001480317.1 157372328 5605053 complement(4550795..4551124) 1 NC_009832.1 PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 4551124 5605053 Spro_4094 Serratia proteamaculans 568 hypothetical protein YP_001480317.1 4550795 R 399741 CDS YP_001480318.1 157372329 5605054 complement(4551359..4552117) 1 NC_009832.1 KEGG: eca:ECA0561 hypothetical protein; hypothetical protein 4552117 5605054 Spro_4095 Serratia proteamaculans 568 hypothetical protein YP_001480318.1 4551359 R 399741 CDS YP_001480319.1 157372330 5605055 complement(4552098..4554290) 1 NC_009832.1 KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein 4554290 5605055 Spro_4096 Serratia proteamaculans 568 putative plasmid transfer protein YP_001480319.1 4552098 R 399741 CDS YP_001480320.1 157372331 5602745 complement(4554719..4555345) 1 NC_009832.1 PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease 4555345 5602745 Spro_4097 Serratia proteamaculans 568 restriction endonuclease YP_001480320.1 4554719 R 399741 CDS YP_001480321.1 157372332 5602746 complement(4555342..4555866) 1 NC_009832.1 KEGG: eca:ECA0557 hypothetical protein; hypothetical protein 4555866 5602746 Spro_4098 Serratia proteamaculans 568 hypothetical protein YP_001480321.1 4555342 R 399741 CDS YP_001480322.1 157372333 5602747 complement(4555869..4556561) 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase 4556561 5602747 Spro_4099 Serratia proteamaculans 568 lytic transglycosylase YP_001480322.1 4555869 R 399741 CDS YP_001480323.1 157372334 5602482 complement(4556540..4557250) 1 NC_009832.1 KEGG: eca:ECA0555 hypothetical protein; hypothetical protein 4557250 5602482 Spro_4100 Serratia proteamaculans 568 hypothetical protein YP_001480323.1 4556540 R 399741 CDS YP_001480324.1 157372335 5602483 complement(4557261..4558004) 1 NC_009832.1 KEGG: stt:t4255 hypothetical protein; hypothetical protein 4558004 5602483 Spro_4101 Serratia proteamaculans 568 hypothetical protein YP_001480324.1 4557261 R 399741 CDS YP_001480325.1 157372336 5602484 complement(4558001..4558621) 1 NC_009832.1 KEGG: pap:PSPA7_4470 type IV B pilus protein; type IV B pilus protein 4558621 5602484 Spro_4102 Serratia proteamaculans 568 type IV B pilus protein YP_001480325.1 4558001 R 399741 CDS YP_001480326.1 157372337 5605877 complement(4558768..4559004) 1 NC_009832.1 KEGG: acr:Acry_3623 hypothetical protein; hypothetical protein 4559004 5605877 Spro_4103 Serratia proteamaculans 568 hypothetical protein YP_001480326.1 4558768 R 399741 CDS YP_001480327.1 157372338 5605878 complement(4559021..4559257) 1 NC_009832.1 KEGG: acr:Acry_3624 hypothetical protein; hypothetical protein 4559257 5605878 Spro_4104 Serratia proteamaculans 568 hypothetical protein YP_001480327.1 4559021 R 399741 CDS YP_001480328.1 157372339 5605879 complement(4559273..4559818) 1 NC_009832.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein 4559818 5605879 Spro_4105 Serratia proteamaculans 568 single-strand binding protein YP_001480328.1 4559273 R 399741 CDS YP_001480329.1 157372340 5602476 complement(4559890..4560357) 1 NC_009832.1 KEGG: plu:plu1038 hypothetical protein; hypothetical protein 4560357 5602476 Spro_4106 Serratia proteamaculans 568 hypothetical protein YP_001480329.1 4559890 R 399741 CDS YP_001480330.1 157372341 5602477 complement(4561072..4563111) 1 NC_009832.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 4563111 5602477 Spro_4107 Serratia proteamaculans 568 DNA topoisomerase III YP_001480330.1 4561072 R 399741 CDS YP_001480331.1 157372342 5602478 complement(4563126..4563701) 1 NC_009832.1 hypothetical protein 4563701 5602478 Spro_4108 Serratia proteamaculans 568 hypothetical protein YP_001480331.1 4563126 R 399741 CDS YP_001480332.1 157372343 5602944 complement(4563698..4564459) 1 NC_009832.1 PFAM: Domain of unknown function DUF1845; KEGG: plu:plu1036 hypothetical protein; hypothetical protein 4564459 5602944 Spro_4109 Serratia proteamaculans 568 hypothetical protein YP_001480332.1 4563698 R 399741 CDS YP_001480333.1 157372344 5602945 complement(4564752..4565999) 1 NC_009832.1 KEGG: plu:plu1035 hypothetical protein; hypothetical protein 4565999 5602945 Spro_4110 Serratia proteamaculans 568 hypothetical protein YP_001480333.1 4564752 R 399741 CDS YP_001480334.1 157372345 5602946 complement(4566134..4566238) 1 NC_009832.1 KEGG: eca:ECA0522A hypothetical protein; hypothetical protein 4566238 5602946 Spro_4111 Serratia proteamaculans 568 hypothetical protein YP_001480334.1 4566134 R 399741 CDS YP_001480335.1 157372346 5602893 complement(4566394..4567023) 1 NC_009832.1 KEGG: plu:plu1034 hypothetical protein; hypothetical protein 4567023 5602893 Spro_4112 Serratia proteamaculans 568 hypothetical protein YP_001480335.1 4566394 R 399741 CDS YP_001480336.1 157372347 5602894 complement(4567028..4567747) 1 NC_009832.1 KEGG: eca:ECA0552 hypothetical protein; hypothetical protein 4567747 5602894 Spro_4113 Serratia proteamaculans 568 hypothetical protein YP_001480336.1 4567028 R 399741 CDS YP_001480337.1 157372348 5602895 complement(4567747..4569492) 1 NC_009832.1 KEGG: stt:t4228 hypothetical protein; hypothetical protein 4569492 5602895 Spro_4114 Serratia proteamaculans 568 hypothetical protein YP_001480337.1 4567747 R 399741 CDS YP_001480338.1 157372349 5602695 complement(4569495..4570850) 1 NC_009832.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: plu:plu1031 unnamed protein product; similar to DNA helicase; replicative DNA helicase 4570850 5602695 Spro_4115 Serratia proteamaculans 568 replicative DNA helicase YP_001480338.1 4569495 R 399741 CDS YP_001480339.1 157372350 5602696 complement(4570847..4571773) 1 NC_009832.1 KEGG: eca:ECA0516 hypothetical protein; hypothetical protein 4571773 5602696 Spro_4116 Serratia proteamaculans 568 hypothetical protein YP_001480339.1 4570847 R 399741 CDS YP_001480340.1 157372351 5602697 complement(4572097..4573110) 1 NC_009832.1 PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein; integrase family protein 4573110 5602697 Spro_4117 Serratia proteamaculans 568 integrase family protein YP_001480340.1 4572097 R 399741 CDS YP_001480341.1 157372352 5602821 complement(4573178..4574887) 1 NC_009832.1 PFAM: protein of unknown function DUF1528; Relaxase; KEGG: plu:plu1165 hypothetical protein; relaxase 4574887 5602821 Spro_4118 Serratia proteamaculans 568 relaxase YP_001480341.1 4573178 R 399741 CDS YP_001480342.1 157372353 5602822 complement(4575504..4576154) 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: asa:ASA_P5G023 hypothetical protein; LuxR family transcriptional regulator 4576154 5602822 Spro_4119 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001480342.1 4575504 R 399741 CDS YP_001480343.1 157372354 5602823 4576453..4577205 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ypi:YpsIP31758_2523 oxidoreductase, short chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 4577205 5602823 Spro_4120 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480343.1 4576453 D 399741 CDS YP_001480344.1 157372355 5605023 complement(4577486..4578409) 1 NC_009832.1 PFAM: protein of unknown function DUF1281; KEGG: ypi:YpsIP31758_3689 hypothetical protein; hypothetical protein 4578409 5605023 Spro_4121 Serratia proteamaculans 568 hypothetical protein YP_001480344.1 4577486 R 399741 CDS YP_001480345.1 157372356 5605024 complement(4578526..4578792) 1 NC_009832.1 KEGG: yen:YE3459 hypothetical protein; hypothetical protein 4578792 5605024 Spro_4122 Serratia proteamaculans 568 hypothetical protein YP_001480345.1 4578526 R 399741 CDS YP_001480346.1 157372357 5605025 complement(4578801..4579808) 1 NC_009832.1 PFAM: domain of unknown function DUF1738; KEGG: yen:YE3460 hypothetical protein; hypothetical protein 4579808 5605025 Spro_4123 Serratia proteamaculans 568 hypothetical protein YP_001480346.1 4578801 R 399741 CDS YP_001480347.1 157372358 5604997 complement(4579882..4580484) 1 NC_009832.1 KEGG: stt:t4289 hypothetical protein; hypothetical protein 4580484 5604997 Spro_4124 Serratia proteamaculans 568 hypothetical protein YP_001480347.1 4579882 R 399741 CDS YP_001480348.1 157372359 5604998 complement(4580598..4580957) 1 NC_009832.1 hypothetical protein 4580957 5604998 Spro_4125 Serratia proteamaculans 568 hypothetical protein YP_001480348.1 4580598 R 399741 CDS YP_001480349.1 157372360 5604999 4582056..4582310 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: yen:YE3496A putative DNA-binding protein; XRE family transcriptional regulator 4582310 5604999 Spro_4126 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001480349.1 4582056 D 399741 CDS YP_001480350.1 157372361 5604571 complement(4582470..4583357) 1 NC_009832.1 KEGG: plu:plu1152 hypothetical protein; hypothetical protein 4583357 5604571 Spro_4127 Serratia proteamaculans 568 hypothetical protein YP_001480350.1 4582470 R 399741 CDS YP_001480351.1 157372362 5604572 complement(4584414..4584722) 1 NC_009832.1 hypothetical protein 4584722 5604572 Spro_4128 Serratia proteamaculans 568 hypothetical protein YP_001480351.1 4584414 R 399741 CDS YP_001480352.1 157372363 5604573 4585117..4585440 1 NC_009832.1 KEGG: ypk:y2721 hypothetical protein; hypothetical protein 4585440 5604573 Spro_4129 Serratia proteamaculans 568 hypothetical protein YP_001480352.1 4585117 D 399741 CDS YP_001480353.1 157372364 5602940 4586110..4586943 1 NC_009832.1 PFAM: ThiJ/PfpI domain protein; KEGG: plu:plu3545 hypothetical protein; ThiJ/PfpI domain-containing protein 4586943 5602940 Spro_4131 Serratia proteamaculans 568 ThiJ/PfpI domain-containing protein YP_001480353.1 4586110 D 399741 CDS YP_001480354.1 157372365 5604599 4587411..4587620 1 NC_009832.1 KEGG: vpa:VP2147 hypothetical protein; hypothetical protein 4587620 5604599 Spro_4132 Serratia proteamaculans 568 hypothetical protein YP_001480354.1 4587411 D 399741 CDS YP_001480355.1 157372366 5604600 complement(4587744..4588190) 1 NC_009832.1 hypothetical protein 4588190 5604600 Spro_4133 Serratia proteamaculans 568 hypothetical protein YP_001480355.1 4587744 R 399741 CDS YP_001480356.1 157372367 5604363 complement(4588192..4588995) 1 NC_009832.1 PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC 4588995 5604363 Spro_4134 Serratia proteamaculans 568 transcriptional regulator CadC YP_001480356.1 4588192 R 399741 CDS YP_001480357.1 157372368 5604364 4589452..4589856 1 NC_009832.1 KEGG: yen:YE3563 hypothetical protein; putative transcriptional regulator CadC 4589856 5604364 Spro_4135 Serratia proteamaculans 568 putative transcriptional regulator CadC YP_001480357.1 4589452 D 399741 CDS YP_001480358.1 157372369 5604365 complement(4590036..4590293) 1 NC_009832.1 hypothetical protein 4590293 5604365 Spro_4136 Serratia proteamaculans 568 hypothetical protein YP_001480358.1 4590036 R 399741 CDS YP_001480359.1 157372370 5604345 complement(4590820..4591614) 1 NC_009832.1 hypothetical protein 4591614 5604345 Spro_4137 Serratia proteamaculans 568 hypothetical protein YP_001480359.1 4590820 R 399741 CDS YP_001480360.1 157372371 5604346 complement(4593443..4594420) 1 NC_009832.1 KEGG: plt:Plut_0869 hypothetical protein; hypothetical protein 4594420 5604346 Spro_4138 Serratia proteamaculans 568 hypothetical protein YP_001480360.1 4593443 R 399741 CDS YP_001480361.1 157372372 5604347 complement(4594582..4595124) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0776 MrfG protein; fimbrial protein 4595124 5604347 Spro_4139 Serratia proteamaculans 568 fimbrial protein YP_001480361.1 4594582 R 399741 CDS YP_001480362.1 157372373 5603811 complement(4595134..4595562) 1 NC_009832.1 KEGG: plu:plu0775 MrfF protein; MrfF protein 4595562 5603811 Spro_4140 Serratia proteamaculans 568 MrfF protein YP_001480362.1 4595134 R 399741 CDS YP_001480363.1 157372374 5603812 complement(4595646..4596146) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0774 MrfE protein; fimbrial protein 4596146 5603812 Spro_4141 Serratia proteamaculans 568 fimbrial protein YP_001480363.1 4595646 R 399741 CDS YP_001480364.1 157372375 5603813 complement(4596157..4596669) 1 NC_009832.1 KEGG: plu:plu0774 MrfE protein; MrfE protein 4596669 5603813 Spro_4142 Serratia proteamaculans 568 MrfE protein YP_001480364.1 4596157 R 399741 CDS YP_001480365.1 157372376 5603746 complement(4596681..4597157) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0774 MrfE protein; fimbrial protein 4597157 5603746 Spro_4143 Serratia proteamaculans 568 fimbrial protein YP_001480365.1 4596681 R 399741 CDS YP_001480366.1 157372377 5603747 complement(4597207..4597875) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0773 MrfX protein; fimbrial protein 4597875 5603747 Spro_4144 Serratia proteamaculans 568 fimbrial protein YP_001480366.1 4597207 R 399741 CDS YP_001480367.1 157372378 5603748 complement(4597920..4598675) 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein; pili assembly chaperone 4598675 5603748 Spro_4145 Serratia proteamaculans 568 pili assembly chaperone YP_001480367.1 4597920 R 399741 CDS YP_001480368.1 157372379 5603705 complement(4598672..4601212) 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein; fimbrial biogenesis outer membrane usher protein 4601212 5603705 Spro_4146 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001480368.1 4598672 R 399741 CDS YP_001480369.1 157372380 5603706 complement(4601235..4601777) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein; fimbrial protein 4601777 5603706 Spro_4147 Serratia proteamaculans 568 fimbrial protein YP_001480369.1 4601235 R 399741 CDS YP_001480370.1 157372381 5603707 complement(4601864..4602403) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: ent:Ent638_0401 fimbrial protein; fimbrial protein 4602403 5603707 Spro_4148 Serratia proteamaculans 568 fimbrial protein YP_001480370.1 4601864 R 399741 CDS YP_001480371.1 157372382 5602573 4603091..4603393 1 NC_009832.1 KEGG: plu:plu3508 hypothetical protein; hypothetical protein 4603393 5602573 Spro_4149 Serratia proteamaculans 568 hypothetical protein YP_001480371.1 4603091 D 399741 CDS YP_001480372.1 157372383 5602574 4603529..4604218 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: pol:Bpro_4296 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4604218 5602574 Spro_4150 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001480372.1 4603529 D 399741 CDS YP_001480373.1 157372384 5602575 4604205..4604603 1 NC_009832.1 KEGG: kpn:KPN_00129 hypothetical protein; hypothetical protein 4604603 5602575 Spro_4151 Serratia proteamaculans 568 hypothetical protein YP_001480373.1 4604205 D 399741 CDS YP_001480374.1 157372385 5602514 4604600..4606216 1 NC_009832.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: kpn:KPN_00128 hypothetical protein; FKBP-type peptidyl-prolyl isomerase domain-containing protein 4606216 5602514 Spro_4152 Serratia proteamaculans 568 FKBP-type peptidyl-prolyl isomerase domain-containing protein YP_001480374.1 4604600 D 399741 CDS YP_001480375.1 157372386 5602515 4606845..4607429 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0507 hypothetical protein; fimbrial protein 4607429 5602515 Spro_4153 Serratia proteamaculans 568 fimbrial protein YP_001480375.1 4606845 D 399741 CDS YP_001480376.1 157372387 5602516 4607479..4608174 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: plu:plu0506 hypothetical protein; pili assembly chaperone 4608174 5602516 Spro_4154 Serratia proteamaculans 568 pili assembly chaperone YP_001480376.1 4607479 D 399741 CDS YP_001480377.1 157372388 5602973 4608190..4610700 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0505 hypothetical protein; fimbrial biogenesis outer membrane usher protein 4610700 5602973 Spro_4155 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001480377.1 4608190 D 399741 CDS YP_001480378.1 157372389 5602974 4610722..4611789 1 NC_009832.1 KEGG: plu:plu0504 hypothetical protein; hypothetical protein 4611789 5602974 Spro_4156 Serratia proteamaculans 568 hypothetical protein YP_001480378.1 4610722 D 399741 CDS YP_001480379.1 157372390 5602975 4611843..4612373 1 NC_009832.1 hypothetical protein 4612373 5602975 Spro_4157 Serratia proteamaculans 568 hypothetical protein YP_001480379.1 4611843 D 399741 CDS YP_001480380.1 157372391 5606441 complement(4613481..4613888) 1 NC_009832.1 hypothetical protein 4613888 5606441 Spro_4158 Serratia proteamaculans 568 hypothetical protein YP_001480380.1 4613481 R 399741 CDS YP_001480381.1 157372392 5606442 complement(4614400..4615251) 1 NC_009832.1 PFAM: Integrase catalytic region; KEGG: psa:PST_1859 transposase, IS3 family; Integrase catalytic subunit 4615251 5606442 Spro_4159 Serratia proteamaculans 568 Integrase catalytic subunit YP_001480381.1 4614400 R 399741 CDS YP_001480382.1 157372393 5606443 complement(4615272..4615550) 1 NC_009832.1 PFAM: transposase IS3/IS911 family protein; KEGG: psa:PST_3402 ISxac3 transposase; transposase IS3/IS911 family protein 4615550 5606443 Spro_4160 Serratia proteamaculans 568 transposase IS3/IS911 family protein YP_001480382.1 4615272 R 399741 CDS YP_001480383.1 157372394 5606959 complement(4615842..4617365) 1 NC_009832.1 KEGG: eca:ECA0580 hypothetical protein; hypothetical protein 4617365 5606959 Spro_4161 Serratia proteamaculans 568 hypothetical protein YP_001480383.1 4615842 R 399741 CDS YP_001480384.1 157372395 5606960 complement(4617362..4617733) 1 NC_009832.1 KEGG: eca:ECA0579 hypothetical protein; hypothetical protein 4617733 5606960 Spro_4162 Serratia proteamaculans 568 hypothetical protein YP_001480384.1 4617362 R 399741 CDS YP_001480385.1 157372396 5606961 complement(4617751..4619235) 1 NC_009832.1 KEGG: eca:ECA0578 hypothetical protein; hypothetical protein 4619235 5606961 Spro_4163 Serratia proteamaculans 568 hypothetical protein YP_001480385.1 4617751 R 399741 CDS YP_001480386.1 157372397 5603403 complement(4619246..4620253) 1 NC_009832.1 PFAM: protein of unknown function DUF1527; KEGG: eca:ECA0577 hypothetical protein; hypothetical protein 4620253 5603403 Spro_4164 Serratia proteamaculans 568 hypothetical protein YP_001480386.1 4619246 R 399741 CDS YP_001480387.1 157372398 5603404 complement(4620255..4620659) 1 NC_009832.1 PFAM: protein of unknown function DUF1525; KEGG: eca:ECA0576 hypothetical protein; hypothetical protein 4620659 5603404 Spro_4165 Serratia proteamaculans 568 hypothetical protein YP_001480387.1 4620255 R 399741 CDS YP_001480388.1 157372399 5603405 complement(4620781..4621713) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: kpn:KPN_02993 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 4621713 5603405 Spro_4166 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480388.1 4620781 R 399741 CDS YP_001480389.1 157372400 5606013 4621797..4622423 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: kpn:KPN_02994 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 4622423 5606013 Spro_4167 Serratia proteamaculans 568 NAD(P)H dehydrogenase (quinone) YP_001480389.1 4621797 D 399741 CDS YP_001480390.1 157372401 5606014 complement(4622661..4623065) 1 NC_009832.1 KEGG: eca:ECA0574 hypothetical protein; hypothetical protein 4623065 5606014 Spro_4168 Serratia proteamaculans 568 hypothetical protein YP_001480390.1 4622661 R 399741 CDS YP_001480391.1 157372402 5606015 complement(4623062..4625926) 1 NC_009832.1 KEGG: eca:ECA0573 putative plasmid-related protein; putative plasmid-like protein 4625926 5606015 Spro_4169 Serratia proteamaculans 568 putative plasmid-like protein YP_001480391.1 4623062 R 399741 CDS YP_001480392.1 157372403 5603305 complement(4625926..4626351) 1 NC_009832.1 KEGG: eca:ECA0572 putative lipoprotein; putative lipoprotein 4626351 5603305 Spro_4170 Serratia proteamaculans 568 putative lipoprotein YP_001480392.1 4625926 R 399741 CDS YP_001480393.1 157372404 5603306 complement(4626507..4628003) 1 NC_009832.1 KEGG: eca:ECA0570 hypothetical protein; hypothetical protein 4628003 5603306 Spro_4171 Serratia proteamaculans 568 hypothetical protein YP_001480393.1 4626507 R 399741 CDS YP_001480394.1 157372405 5603307 complement(4627996..4628907) 1 NC_009832.1 KEGG: eca:ECA0569 hypothetical protein; hypothetical protein 4628907 5603307 Spro_4172 Serratia proteamaculans 568 hypothetical protein YP_001480394.1 4627996 R 399741 CDS YP_001480395.1 157372406 5605836 complement(4628904..4629575) 1 NC_009832.1 KEGG: eca:ECA0568 hypothetical protein; hypothetical protein 4629575 5605836 Spro_4173 Serratia proteamaculans 568 hypothetical protein YP_001480395.1 4628904 R 399741 CDS YP_001480396.1 157372407 5605837 complement(4629572..4629937) 1 NC_009832.1 KEGG: eca:ECA0567 hypothetical protein; hypothetical protein 4629937 5605837 Spro_4174 Serratia proteamaculans 568 hypothetical protein YP_001480396.1 4629572 R 399741 CDS YP_001480397.1 157372408 5605838 complement(4629949..4630314) 1 NC_009832.1 KEGG: plu:plu1080 hypothetical protein; hypothetical protein 4630314 5605838 Spro_4175 Serratia proteamaculans 568 hypothetical protein YP_001480397.1 4629949 R 399741 CDS YP_001480398.1 157372409 5603299 complement(4630383..4630625) 1 NC_009832.1 KEGG: eca:ECA0565 hypothetical protein; hypothetical protein 4630625 5603299 Spro_4176 Serratia proteamaculans 568 hypothetical protein YP_001480398.1 4630383 R 399741 CDS YP_001480399.1 157372410 5603300 complement(4630625..4630954) 1 NC_009832.1 PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: eca:ECA0564 hypothetical protein; hypothetical protein 4630954 5603300 Spro_4177 Serratia proteamaculans 568 hypothetical protein YP_001480399.1 4630625 R 399741 CDS YP_001480400.1 157372411 5603301 complement(4631722..4632480) 1 NC_009832.1 KEGG: eca:ECA0561 hypothetical protein; hypothetical protein 4632480 5603301 Spro_4178 Serratia proteamaculans 568 hypothetical protein YP_001480400.1 4631722 R 399741 CDS YP_001480401.1 157372412 5605336 complement(4632461..4634575) 1 NC_009832.1 KEGG: eca:ECA0560 putative plasmid transfer protein; putative plasmid transfer protein 4634575 5605336 Spro_4179 Serratia proteamaculans 568 putative plasmid transfer protein YP_001480401.1 4632461 R 399741 CDS YP_001480402.1 157372413 5605337 complement(4634572..4635162) 1 NC_009832.1 PFAM: restriction endonuclease; KEGG: eca:ECA0558 hypothetical protein; restriction endonuclease 4635162 5605337 Spro_4180 Serratia proteamaculans 568 restriction endonuclease YP_001480402.1 4634572 R 399741 CDS YP_001480403.1 157372414 5605338 complement(4635159..4635683) 1 NC_009832.1 KEGG: eca:ECA0557 hypothetical protein; hypothetical protein 4635683 5605338 Spro_4181 Serratia proteamaculans 568 hypothetical protein YP_001480403.1 4635159 R 399741 CDS YP_001480404.1 157372415 5605199 complement(4635686..4636378) 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein; lytic transglycosylase 4636378 5605199 Spro_4182 Serratia proteamaculans 568 lytic transglycosylase YP_001480404.1 4635686 R 399741 CDS YP_001480405.1 157372416 5605200 complement(4636357..4637067) 1 NC_009832.1 KEGG: eca:ECA0555 hypothetical protein; hypothetical protein 4637067 5605200 Spro_4183 Serratia proteamaculans 568 hypothetical protein YP_001480405.1 4636357 R 399741 CDS YP_001480406.1 157372417 5605201 complement(4637078..4637833) 1 NC_009832.1 KEGG: stt:t4255 hypothetical protein; hypothetical protein 4637833 5605201 Spro_4184 Serratia proteamaculans 568 hypothetical protein YP_001480406.1 4637078 R 399741 CDS YP_001480407.1 157372418 5605184 4637858..4638409 1 NC_009832.1 KEGG: xac:XAC3619 hypothetical protein; hypothetical protein 4638409 5605184 Spro_4185 Serratia proteamaculans 568 hypothetical protein YP_001480407.1 4637858 D 399741 CDS YP_001480408.1 157372419 5605185 complement(4638473..4638796) 1 NC_009832.1 hypothetical protein 4638796 5605185 Spro_4186 Serratia proteamaculans 568 hypothetical protein YP_001480408.1 4638473 R 399741 CDS YP_001480409.1 157372420 5605186 complement(4638808..4641117) 1 NC_009832.1 PFAM: Rhs element Vgr protein; KEGG: bbr:BB0793 hypothetical protein; Rhs element Vgr protein 4641117 5605186 Spro_4187 Serratia proteamaculans 568 Rhs element Vgr protein YP_001480409.1 4638808 R 399741 CDS YP_001480410.1 157372421 5605127 complement(4641164..4641556) 1 NC_009832.1 KEGG: bpa:BPP0711 hypothetical protein; hypothetical protein 4641556 5605127 Spro_4188 Serratia proteamaculans 568 hypothetical protein YP_001480410.1 4641164 R 399741 CDS YP_001480411.1 157372422 5605128 complement(4641567..4642172) 1 NC_009832.1 KEGG: bbr:BB0806 hypothetical protein; hypothetical protein 4642172 5605128 Spro_4189 Serratia proteamaculans 568 hypothetical protein YP_001480411.1 4641567 R 399741 CDS YP_001480412.1 157372423 5605129 complement(4642182..4643252) 1 NC_009832.1 PFAM: pentapeptide repeat protein; KEGG: bbr:BB0796 hypothetical protein; pentapeptide repeat-containing protein 4643252 5605129 Spro_4190 Serratia proteamaculans 568 pentapeptide repeat-containing protein YP_001480412.1 4642182 R 399741 CDS YP_001480413.1 157372424 5604966 complement(4643249..4645783) 1 NC_009832.1 PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein; pentapeptide repeat-containing protein 4645783 5604966 Spro_4191 Serratia proteamaculans 568 pentapeptide repeat-containing protein YP_001480413.1 4643249 R 399741 CDS YP_001480414.1 157372425 5604967 4646731..4647141 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE0513 putative acetyltransferase; GCN5-like N-acetyltransferase 4647141 5604967 Spro_4192 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001480414.1 4646731 D 399741 CDS YP_001480415.1 157372426 5604968 4647167..4647856 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: yen:YE0514 putative transcriptional regulator; LuxR family transcriptional regulator 4647856 5604968 Spro_4193 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001480415.1 4647167 D 399741 CDS YP_001480416.1 157372427 5604595 4647876..4649171 1 NC_009832.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: yen:YE0515 putative permease; cytosine/purines uracil thiamine allantoin permease 4649171 5604595 Spro_4194 Serratia proteamaculans 568 cytosine/purines uracil thiamine allantoin permease YP_001480416.1 4647876 D 399741 CDS YP_001480417.1 157372428 5604596 4649719..4650333 1 NC_009832.1 SMART: helix-turn-helix domain protein; KEGG: plu:plu1490 hypothetical protein; XRE family transcriptional regulator 4650333 5604596 Spro_4195 Serratia proteamaculans 568 XRE family transcriptional regulator YP_001480417.1 4649719 D 399741 CDS YP_001480418.1 157372429 5604597 4650334..4651230 1 NC_009832.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: plu:plu1489 hypothetical protein; hypothetical protein 4651230 5604597 Spro_4196 Serratia proteamaculans 568 hypothetical protein YP_001480418.1 4650334 D 399741 CDS YP_001480419.1 157372430 5604654 4651208..4652050 1 NC_009832.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 4652050 queF 5604654 queF Serratia proteamaculans 568 7-cyano-7-deazaguanine reductase YP_001480419.1 4651208 D 399741 CDS YP_001480420.1 157372431 5604655 4652173..4654320 1 NC_009832.1 PFAM: phosphoesterase; protein of unknown function DUF756; KEGG: pfl:PFL_3126 phospholipase C; phospholipase C 4654320 5604655 Spro_4198 Serratia proteamaculans 568 phospholipase C YP_001480420.1 4652173 D 399741 CDS YP_001480421.1 157372432 5604656 complement(4654357..4655253) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: plu:plu3727 putative transcriptional regulator AbgR; putative DNA-binding transcriptional regulator 4655253 5604656 Spro_4199 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001480421.1 4654357 R 399741 CDS YP_001480422.1 157372433 5602782 4655525..4656841 1 NC_009832.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: plu:plu3726 aminobenzoyl-glutamate utilization protein A; amidohydrolase 4656841 5602782 Spro_4200 Serratia proteamaculans 568 amidohydrolase YP_001480422.1 4655525 D 399741 CDS YP_001480423.1 157372434 5602783 4656838..4658289 1 NC_009832.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: plu:plu3725 aminobenzoyl-glutamate utilization protein B; amidohydrolase 4658289 5602783 Spro_4201 Serratia proteamaculans 568 amidohydrolase YP_001480423.1 4656838 D 399741 CDS YP_001480424.1 157372435 5602784 4658394..4659920 1 NC_009832.1 PFAM: AbgT putative transporter; KEGG: plu:plu3724 aminobenzoyl-glutamate transport protein; putative aminobenzoyl-glutamate transporter 4659920 abgT 5602784 abgT Serratia proteamaculans 568 putative aminobenzoyl-glutamate transporter YP_001480424.1 4658394 D 399741 CDS YP_001480425.1 157372436 5604702 4660097..4661026 1 NC_009832.1 phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 4661026 5604702 Spro_4203 Serratia proteamaculans 568 aminoimidazole riboside kinase YP_001480425.1 4660097 D 399741 CDS YP_001480426.1 157372437 5604703 4661242..4662651 1 NC_009832.1 KEGG: plu:plu1882 hypothetical protein; hypothetical protein 4662651 5604703 Spro_4204 Serratia proteamaculans 568 hypothetical protein YP_001480426.1 4661242 D 399741 CDS YP_001480427.1 157372438 5604704 4662717..4664087 1 NC_009832.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: yen:YE0552 PTS system, sucrose-specific IIBC component; PTS system sucrose-specific transporter subunit IIBC 4664087 5604704 Spro_4205 Serratia proteamaculans 568 PTS system sucrose-specific transporter subunit IIBC YP_001480427.1 4662717 D 399741 CDS YP_001480428.1 157372439 5604545 4664087..4665496 1 NC_009832.1 KEGG: yen:YE0551 sucrose-6-phosphate hydrolase; TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase 4665496 5604545 Spro_4206 Serratia proteamaculans 568 sucrose-6-phosphate hydrolase YP_001480428.1 4664087 D 399741 CDS YP_001480429.1 157372440 5604546 4665518..4666561 1 NC_009832.1 KEGG: yen:YE0550A sucrose operon repressor; TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcription regulator 4666561 5604546 Spro_4207 Serratia proteamaculans 568 LacI family transcription regulator YP_001480429.1 4665518 D 399741 CDS YP_001480430.1 157372441 5604547 complement(4666714..4667007) 1 NC_009832.1 PFAM: plasmid stabilization system; KEGG: plu:plu4282 hypothetical protein; plasmid stabilization system protein 4667007 5604547 Spro_4208 Serratia proteamaculans 568 plasmid stabilization system protein YP_001480430.1 4666714 R 399741 CDS YP_001480431.1 157372442 5604587 complement(4667007..4667267) 1 NC_009832.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: plu:plu4283 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 4667267 5604587 Spro_4209 Serratia proteamaculans 568 CopG/Arc/MetJ family addiction module antidote protein YP_001480431.1 4667007 R 399741 CDS YP_001480432.1 157372443 5604588 complement(4667396..4667824) 1 NC_009832.1 TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plu:plu3940 biopolymer transport protein ExbD; TonB system transport protein ExbD type-1 4667824 5604588 Spro_4210 Serratia proteamaculans 568 TonB system transport protein ExbD type-1 YP_001480432.1 4667396 R 399741 CDS YP_001480433.1 157372444 5604589 complement(4667828..4668799) 1 NC_009832.1 TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel; KEGG: ypm:YP_2997 TonB complex protein; TonB-system energizer ExbB type-1 4668799 5604589 Spro_4211 Serratia proteamaculans 568 TonB-system energizer ExbB type-1 YP_001480433.1 4667828 R 399741 CDS YP_001480434.1 157372445 5604387 4669055..4670251 1 NC_009832.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 4670251 5604387 Spro_4212 Serratia proteamaculans 568 cystathionine beta-lyase YP_001480434.1 4669055 D 399741 CDS YP_001480435.1 157372446 5604388 4670405..4671067 1 NC_009832.1 PFAM: SNARE associated Golgi protein; KEGG: ypi:YpsIP31758_0589 hypothetical protein; hypothetical protein 4671067 5604388 Spro_4213 Serratia proteamaculans 568 hypothetical protein YP_001480435.1 4670405 D 399741 CDS YP_001480436.1 157372447 5604389 complement(4671106..4672023) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: yen:YE3649 AraC-family regulatory protein; AraC family transcriptional regulator 4672023 5604389 Spro_4214 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001480436.1 4671106 R 399741 CDS YP_001480437.1 157372448 5603574 4672217..4673380 1 NC_009832.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eca:ECA0350 putative iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4673380 5603574 Spro_4215 Serratia proteamaculans 568 iron-containing alcohol dehydrogenase YP_001480437.1 4672217 D 399741 CDS YP_001480438.1 157372449 5603575 4673583..4674407 1 NC_009832.1 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 4674407 dkgA 5603575 dkgA Serratia proteamaculans 568 2,5-diketo-D-gluconate reductase A YP_001480438.1 4673583 D 399741 CDS YP_001480439.1 157372450 5603576 complement(4674459..4675097) 1 NC_009832.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: ppr:PBPRA1494 putative torD protein; cytoplasmic chaperone TorD family protein 4675097 5603576 Spro_4217 Serratia proteamaculans 568 cytoplasmic chaperone TorD family protein YP_001480439.1 4674459 R 399741 CDS YP_001480440.1 157372451 5603532 complement(4675084..4677597) 1 NC_009832.1 KEGG: ppr:PBPRA1495 putative trimethylamine-N-oxide reductase 1 precursor; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 4677597 5603532 Spro_4218 Serratia proteamaculans 568 molybdopterin guanine dinucleotide-containing S/N-oxide reductase YP_001480440.1 4675084 R 399741 CDS YP_001480441.1 157372452 5603533 complement(4677612..4678691) 1 NC_009832.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: ecv:APECO1_89 cytochrome c-type protein TorC; NapC/NirT cytochrome c domain-containing protein 4678691 5603533 Spro_4219 Serratia proteamaculans 568 NapC/NirT cytochrome c domain-containing protein YP_001480441.1 4677612 R 399741 CDS YP_001480442.1 157372453 5603534 4678925..4680421 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pap:PSPA7_3030 transcriptional regulator, GntR family, with aminotransferase domain; transcriptional regulator 4680421 5603534 Spro_4220 Serratia proteamaculans 568 transcriptional regulator YP_001480442.1 4678925 D 399741 CDS YP_001480443.1 157372454 5603175 complement(4680442..4681845) 1 NC_009832.1 PFAM: glycoside hydrolase family 1; KEGG: kpn:KPN_01961 6-phospho-beta-glucosidase A; beta-glucosidase 4681845 5603175 Spro_4221 Serratia proteamaculans 568 beta-glucosidase YP_001480443.1 4680442 R 399741 CDS YP_001480444.1 157372455 5603176 complement(4681842..4682171) 1 NC_009832.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: vfi:VF0607 PTS system, diacetylchitobiose-specific IIA component; PTS system lactose/cellobiose-specific transporter subunit IIA 4682171 5603176 Spro_4222 Serratia proteamaculans 568 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001480444.1 4681842 R 399741 CDS YP_001480445.1 157372456 5603177 complement(4682168..4683487) 1 NC_009832.1 KEGG: ent:Ent638_0526 PTS system, lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 4683487 5603177 Spro_4223 Serratia proteamaculans 568 PTS system lactose/cellobiose family transporter subunit IIC YP_001480445.1 4682168 R 399741 CDS YP_001480446.1 157372457 5602788 complement(4683573..4683884) 1 NC_009832.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eca:ECA4435 pts system, IIb component; PTS system lactose/cellobiose-specific transporter subunit IIB 4683884 5602788 Spro_4224 Serratia proteamaculans 568 PTS system lactose/cellobiose-specific transporter subunit IIB YP_001480446.1 4683573 R 399741 CDS YP_001480447.1 157372458 5602789 complement(4684029..4684916) 1 NC_009832.1 PFAM: Aldose 1-epimerase; KEGG: ecj:JW2528 conserved hypothetical protein; aldose 1-epimerase 4684916 5602789 Spro_4225 Serratia proteamaculans 568 aldose 1-epimerase YP_001480447.1 4684029 R 399741 CDS YP_001480448.1 157372459 5602790 complement(4684931..4685989) 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_2628 putative oxidoreductase; alcohol dehydrogenase 4685989 5602790 Spro_4226 Serratia proteamaculans 568 alcohol dehydrogenase YP_001480448.1 4684931 R 399741 CDS YP_001480449.1 157372460 5602631 complement(4686037..4687017) 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: sbo:SBO_2572 putative transport system permease protein; monosaccharide-transporting ATPase 4687017 5602631 Spro_4227 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001480449.1 4686037 R 399741 CDS YP_001480450.1 157372461 5602632 complement(4687054..4688592) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfv:SFV_2595 putative ATP-binding component of a transport system; ABC transporter-like protein 4688592 5602632 Spro_4228 Serratia proteamaculans 568 ABC transporter-like protein YP_001480450.1 4687054 R 399741 CDS YP_001480451.1 157372462 5602633 complement(4688592..4689575) 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ecc:c3070 ABC transporter Periplasmic binding protein yphF precursor; periplasmic binding protein/LacI transcriptional regulator 4689575 5602633 Spro_4229 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001480451.1 4688592 R 399741 CDS YP_001480452.1 157372463 5604525 complement(4689739..4691142) 1 NC_009832.1 KEGG: kpn:KPN_02872 putative general substrate transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 4691142 5604525 Spro_4230 Serratia proteamaculans 568 sugar transporter YP_001480452.1 4689739 R 399741 CDS YP_001480453.1 157372464 5604526 complement(4691179..4694469) 1 NC_009832.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ecv:APECO1_3982 hypothetical protein; TPR repeat-containing protein 4694469 5604526 Spro_4231 Serratia proteamaculans 568 TPR repeat-containing protein YP_001480453.1 4691179 R 399741 CDS YP_001480454.1 157372465 5604527 4694577..4695779 1 NC_009832.1 PFAM: ROK family protein; KEGG: sdy:SDY_2740 putative NAGC-like transcriptional regulator; ROK family protein 4695779 5604527 Spro_4232 Serratia proteamaculans 568 ROK family protein YP_001480454.1 4694577 D 399741 CDS YP_001480455.1 157372466 5603979 4695776..4696423 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; KEGG: yps:YPTB2346 putative membrane-bound lytic murein transglycosylase; lytic transglycosylase 4696423 5603979 Spro_4233 Serratia proteamaculans 568 lytic transglycosylase YP_001480455.1 4695776 D 399741 CDS YP_001480456.1 157372467 5603980 complement(4696486..4698651) 1 NC_009832.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: yen:YE3653 hypothetical protein; hypothetical protein 4698651 5603980 Spro_4234 Serratia proteamaculans 568 hypothetical protein YP_001480456.1 4696486 R 399741 CDS YP_001480457.1 157372468 5603981 4699316..4699777 1 NC_009832.1 PFAM: integrase family protein; KEGG: plu:plu0768 MrfI protein; integrase family protein 4699777 5603981 Spro_4235 Serratia proteamaculans 568 integrase family protein YP_001480457.1 4699316 D 399741 CDS YP_001480458.1 157372469 5602734 4700000..4700857 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein; AraC family transcriptional regulator 4700857 5602734 Spro_4236 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001480458.1 4700000 D 399741 CDS YP_001480459.1 157372470 5602735 complement(4700871..4702301) 1 NC_009832.1 KEGG: bxe:Bxe_A4151 hypothetical protein; hypothetical protein 4702301 5602735 Spro_4237 Serratia proteamaculans 568 hypothetical protein YP_001480459.1 4700871 R 399741 CDS YP_001480460.1 157372471 5602736 complement(4702376..4702906) 1 NC_009832.1 PFAM: cytochrome B561; KEGG: ppr:PBPRB0313 hypothetical protein; cytochrome B561 4702906 5602736 Spro_4238 Serratia proteamaculans 568 cytochrome B561 YP_001480460.1 4702376 R 399741 CDS YP_001480461.1 157372472 5602867 complement(4702973..4704388) 1 NC_009832.1 GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells; N-acetylglucosamine-binding protein A 4704388 5602867 Spro_4239 Serratia proteamaculans 568 N-acetylglucosamine-binding protein A YP_001480461.1 4702973 R 399741 CDS YP_001480462.1 157372473 5602868 4704643..4705026 1 NC_009832.1 KEGG: eca:ECA3114 general secretion pathway lipoprotein; general secretion pathway lipoprotein 4705026 5602868 Spro_4240 Serratia proteamaculans 568 general secretion pathway lipoprotein YP_001480462.1 4704643 D 399741 CDS YP_001480463.1 157372474 5602869 complement(4705029..4705892) 1 NC_009832.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: asa:ASA_0411 type IV prepilin peptidase TapD; prepilin peptidase 4705892 5602869 Spro_4241 Serratia proteamaculans 568 prepilin peptidase YP_001480463.1 4705029 R 399741 CDS YP_001480464.1 157372475 5603020 complement(4705908..4706360) 1 NC_009832.1 hypothetical protein 4706360 5603020 Spro_4242 Serratia proteamaculans 568 hypothetical protein YP_001480464.1 4705908 R 399741 CDS YP_001480465.1 157372476 5603021 complement(4706357..4707451) 1 NC_009832.1 PFAM: General secretion pathway L; KEGG: spc:Sputcn32_3559 general secretion pathway protein L; general secretion pathway L 4707451 5603021 Spro_4243 Serratia proteamaculans 568 general secretion pathway L YP_001480465.1 4706357 R 399741 CDS YP_001480466.1 157372477 5603022 complement(4707448..4708404) 1 NC_009832.1 PFAM: General secretion pathway protein K; KEGG: eca:ECA3102 general secretion pathway protein K; general secretion pathway protein K 4708404 5603022 Spro_4244 Serratia proteamaculans 568 general secretion pathway protein K YP_001480466.1 4707448 R 399741 CDS YP_001480467.1 157372478 5606827 complement(4708401..4708994) 1 NC_009832.1 TIGRFAM: general secretion pathway protein J; KEGG: yen:YE3570a putative general secretion pathway protein J precursor; general secretion pathway protein J 4708994 5606827 Spro_4245 Serratia proteamaculans 568 general secretion pathway protein J YP_001480467.1 4708401 R 399741 CDS YP_001480468.1 157372479 5606828 complement(4708981..4709361) 1 NC_009832.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: yen:YE3570 general secretion pathway protein I precursor; general secretion pathway protein I 4709361 5606828 Spro_4246 Serratia proteamaculans 568 general secretion pathway protein I YP_001480468.1 4708981 R 399741 CDS YP_001480469.1 157372480 5606829 complement(4709342..4709875) 1 NC_009832.1 TIGRFAM: general secretion pathway protein H; KEGG: asa:ASA_3779 general secretion pathway protein H; general secretion pathway protein H 4709875 5606829 Spro_4247 Serratia proteamaculans 568 general secretion pathway protein H YP_001480469.1 4709342 R 399741 CDS YP_001480470.1 157372481 5603511 complement(4709865..4710311) 1 NC_009832.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G; general secretion pathway protein G 4710311 5603511 Spro_4248 Serratia proteamaculans 568 general secretion pathway protein G YP_001480470.1 4709865 R 399741 CDS YP_001480471.1 157372482 5603512 complement(4710316..4711527) 1 NC_009832.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F; general secretion pathway protein F 4711527 5603512 Spro_4249 Serratia proteamaculans 568 general secretion pathway protein F YP_001480471.1 4710316 R 399741 CDS YP_001480472.1 157372483 5603513 complement(4711517..4713001) 1 NC_009832.1 KEGG: aha:AHA_0570 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 4713001 5603513 Spro_4250 Serratia proteamaculans 568 general secretory pathway protein E YP_001480472.1 4711517 R 399741 CDS YP_001480473.1 157372484 5606394 complement(4712998..4714980) 1 NC_009832.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: kpn:KPN_00160 pullulanase D protein; general secretion pathway protein D 4714980 5606394 Spro_4251 Serratia proteamaculans 568 general secretion pathway protein D YP_001480473.1 4712998 R 399741 CDS YP_001480474.1 157372485 5606395 complement(4715029..4715562) 1 NC_009832.1 KEGG: yen:YE3564 general secretion pathway protein C; hypothetical protein 4715562 5606395 Spro_4252 Serratia proteamaculans 568 hypothetical protein YP_001480474.1 4715029 R 399741 CDS YP_001480475.1 157372486 5606396 complement(4715611..4716087) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0951 hypothetical protein; putative transcriptional regulator CadC 4716087 5606396 Spro_4253 Serratia proteamaculans 568 putative transcriptional regulator CadC YP_001480475.1 4715611 R 399741 CDS YP_001480476.1 157372487 5605727 complement(4716427..4717686) 1 NC_009832.1 TIGRFAM: nucleoside transporter; PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: ypi:YpsIP31758_2823 xanthosine transporter XapB; nucleoside transporter 4717686 5605727 Spro_4254 Serratia proteamaculans 568 nucleoside transporter YP_001480476.1 4716427 R 399741 CDS YP_001480477.1 157372488 5605728 complement(4717768..4718625) 1 NC_009832.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 4718625 5605728 Spro_4255 Serratia proteamaculans 568 purine nucleoside phosphorylase YP_001480477.1 4717768 R 399741 CDS YP_001480478.1 157372489 5605729 4718788..4719660 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sec:SC2417 regulator for XapA (LysR family); DNA-binding transcriptional activator XapR 4719660 5605729 Spro_4256 Serratia proteamaculans 568 DNA-binding transcriptional activator XapR YP_001480478.1 4718788 D 399741 CDS YP_001480479.1 157372490 5605827 complement(4719657..4721072) 1 NC_009832.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: yen:YE3654 putative cell division protein; repressor protein for FtsI 4721072 5605827 Spro_4257 Serratia proteamaculans 568 repressor protein for FtsI YP_001480479.1 4719657 R 399741 CDS YP_001480480.1 157372491 5605828 complement(4721205..4721942) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0582 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 4721942 5605828 Spro_4258 Serratia proteamaculans 568 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001480480.1 4721205 R 399741 CDS YP_001480481.1 157372492 5605829 complement(4722183..4724456) 1 NC_009832.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4724456 5605829 Spro_4259 Serratia proteamaculans 568 DNA topoisomerase IV subunit A YP_001480481.1 4722183 R 399741 CDS YP_001480482.1 157372493 5605461 4724773..4725354 1 NC_009832.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ypi:YpsIP31758_0580 putative NADH-quinone reductase MdaB; NAD(P)H dehydrogenase (quinone) 4725354 5605461 Spro_4260 Serratia proteamaculans 568 NAD(P)H dehydrogenase (quinone) YP_001480482.1 4724773 D 399741 CDS YP_001480483.1 157372494 5605462 4725388..4725696 1 NC_009832.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: yen:YE3658 hypothetical protein; antibiotic biosynthesis monooxygenase 4725696 5605462 Spro_4261 Serratia proteamaculans 568 antibiotic biosynthesis monooxygenase YP_001480483.1 4725388 D 399741 CDS YP_001480484.1 157372495 5605463 complement(4725710..4726606) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ypi:YpsIP31758_0579 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator 4726606 5605463 Spro_4262 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480484.1 4725710 R 399741 CDS YP_001480485.1 157372496 5605426 complement(4726703..4728598) 1 NC_009832.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4728598 5605426 Spro_4263 Serratia proteamaculans 568 DNA topoisomerase IV subunit B YP_001480485.1 4726703 R 399741 CDS YP_001480486.1 157372497 5605427 complement(4728643..4729227) 1 NC_009832.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA 4729227 5605427 Spro_4264 Serratia proteamaculans 568 esterase YqiA YP_001480486.1 4728643 R 399741 CDS YP_001480487.1 157372498 5605428 complement(4729227..4730054) 1 NC_009832.1 PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: ypp:YPDSF_0448 Icc-like protein; cyclic 3',5'-adenosine monophosphate phosphodiesterase 4730054 5605428 Spro_4265 Serratia proteamaculans 568 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_001480487.1 4729227 R 399741 CDS YP_001480488.1 157372499 5605406 complement(4730082..4730507) 1 NC_009832.1 PFAM: protein of unknown function DUF1249; KEGG: ent:Ent638_3446 protein of unknown function DUF1249; hypothetical protein 4730507 5605406 Spro_4266 Serratia proteamaculans 568 hypothetical protein YP_001480488.1 4730082 R 399741 CDS YP_001480489.1 157372500 5605407 complement(4730507..4731139) 1 NC_009832.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF 4731139 nudF 5605407 nudF Serratia proteamaculans 568 ADP-ribose pyrophosphatase NudF YP_001480489.1 4730507 R 399741 CDS YP_001480490.1 157372501 5605408 4731421..4732914 1 NC_009832.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4732914 tolC 5605408 tolC Serratia proteamaculans 568 outer membrane channel protein YP_001480490.1 4731421 D 399741 CDS YP_001480491.1 157372502 5605220 4733066..4735012 1 NC_009832.1 Positively regulates the dhaKLM operon from a sigma-70 promoter; DNA-binding transcriptional regulator DhaR 4735012 5605220 Spro_4269 Serratia proteamaculans 568 DNA-binding transcriptional regulator DhaR YP_001480491.1 4733066 D 399741 CDS YP_001480492.1 157372503 5605221 complement(4735023..4736456) 1 NC_009832.1 phosphotransferaese subunit; phosphorylates dihydroxyacetone along with DhaK/DhaL; dihydroxyacetone kinase subunit M 4736456 5605221 Spro_4270 Serratia proteamaculans 568 dihydroxyacetone kinase subunit M YP_001480492.1 4735023 R 399741 CDS YP_001480493.1 157372504 5605222 complement(4736468..4737100) 1 NC_009832.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: yen:YE0541 hypothetical protein; dihydroxyacetone kinase subunit L 4737100 5605222 Spro_4271 Serratia proteamaculans 568 dihydroxyacetone kinase subunit L YP_001480493.1 4736468 R 399741 CDS YP_001480494.1 157372505 5605092 complement(4737110..4738180) 1 NC_009832.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 4738180 5605092 Spro_4272 Serratia proteamaculans 568 dihydroxyacetone kinase subunit DhaK YP_001480494.1 4737110 R 399741 CDS YP_001480495.1 157372506 5605093 complement(4738233..4739339) 1 NC_009832.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: yen:YE0539 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 4739339 5605093 Spro_4273 Serratia proteamaculans 568 iron-containing alcohol dehydrogenase YP_001480495.1 4738233 R 399741 CDS YP_001480496.1 157372507 5605094 4739692..4740354 1 NC_009832.1 KEGG: eca:ECA0329 hypothetical protein; hypothetical protein 4740354 5605094 Spro_4274 Serratia proteamaculans 568 hypothetical protein YP_001480496.1 4739692 D 399741 CDS YP_001480497.1 157372508 5604849 4740358..4741518 1 NC_009832.1 PFAM: glutathionylspermidine synthase; KEGG: yen:YE3667 hypothetical protein; glutathionylspermidine synthase 4741518 5604849 Spro_4275 Serratia proteamaculans 568 glutathionylspermidine synthase YP_001480497.1 4740358 D 399741 CDS YP_001480498.1 157372509 5604850 4741642..4742205 1 NC_009832.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 4742205 5604850 Spro_4276 Serratia proteamaculans 568 glucose-6-phosphate isomerase YP_001480498.1 4741642 D 399741 CDS YP_001480499.1 157372510 5604851 4742198..4742980 1 NC_009832.1 KEGG: pdi:BDI_3293 putative thermophilic glucose-6-phosphate isomerase-like protein; glucose-6-phosphate isomerase-like protein 4742980 5604851 Spro_4277 Serratia proteamaculans 568 glucose-6-phosphate isomerase-like protein YP_001480499.1 4742198 D 399741 CDS YP_001480500.1 157372511 5604826 complement(4743210..4744031) 1 NC_009832.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: aha:AHA_2339 fructose permease IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 4744031 5604826 Spro_4278 Serratia proteamaculans 568 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001480500.1 4743210 R 399741 CDS YP_001480501.1 157372512 5604827 complement(4744031..4744831) 1 NC_009832.1 PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: aha:AHA_2340 PTS system, fructose(mannose)-specific IIC; PTS system sorbose-specific transporter subunit IIC 4744831 5604827 Spro_4279 Serratia proteamaculans 568 PTS system sorbose-specific transporter subunit IIC YP_001480501.1 4744031 R 399741 CDS YP_001480502.1 157372513 5604828 complement(4744854..4745348) 1 NC_009832.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: aha:AHA_2341 PTS system mannose-specific EIIAB component (EIIAB-man); PTS system sorbose subfamily transporter subunit IIB 4745348 5604828 Spro_4280 Serratia proteamaculans 568 PTS system sorbose subfamily transporter subunit IIB YP_001480502.1 4744854 R 399741 CDS YP_001480503.1 157372514 5604810 complement(4745358..4745786) 1 NC_009832.1 PFAM: PTS system fructose subfamily IIA component; KEGG: aha:AHA_2342 PTS system, mannose/fructose/sorbose family, IIA component; PTS system fructose subfamily transporter subunit IIA 4745786 5604810 Spro_4281 Serratia proteamaculans 568 PTS system fructose subfamily transporter subunit IIA YP_001480503.1 4745358 R 399741 CDS YP_001480504.1 157372515 5604811 complement(4745792..4747588) 1 NC_009832.1 KEGG: aha:AHA_2343 hypothetical protein; hypothetical protein 4747588 5604811 Spro_4282 Serratia proteamaculans 568 hypothetical protein YP_001480504.1 4745792 R 399741 CDS YP_001480505.1 157372516 5604812 4747776..4748801 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: aha:AHA_2344 maltose regulon regulatory protein MalI; LacI family transcription regulator 4748801 5604812 Spro_4283 Serratia proteamaculans 568 LacI family transcription regulator YP_001480505.1 4747776 D 399741 CDS YP_001480506.1 157372517 5604726 complement(4748817..4749599) 1 NC_009832.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 4749599 5604726 Spro_4284 Serratia proteamaculans 568 hypothetical protein YP_001480506.1 4748817 R 399741 CDS YP_001480507.1 157372518 5604727 4749806..4750573 1 NC_009832.1 PFAM: zinc/iron permease; KEGG: ecv:APECO1_3371 zinc transporter ZupT; zinc transporter ZupT 4750573 5604727 Spro_4285 Serratia proteamaculans 568 zinc transporter ZupT YP_001480507.1 4749806 D 399741 CDS YP_001480508.1 157372519 5604728 complement(4750636..4751289) 1 NC_009832.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 4751289 ribB 5604728 ribB Serratia proteamaculans 568 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001480508.1 4750636 R 399741 CDS YP_001480509.1 157372520 5604519 4751708..4751986 1 NC_009832.1 PFAM: protein of unknown function DUF526; KEGG: yen:YE3671 hypothetical protein; hypothetical protein 4751986 5604519 Spro_4287 Serratia proteamaculans 568 hypothetical protein YP_001480509.1 4751708 D 399741 CDS YP_001480510.1 157372521 5604520 complement(4752016..4753269) 1 NC_009832.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 4753269 5604520 Spro_4288 Serratia proteamaculans 568 inner membrane protein YjeH YP_001480510.1 4752016 R 399741 CDS YP_001480511.1 157372522 5604521 complement(4753295..4754725) 1 NC_009832.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 4754725 5604521 Spro_4289 Serratia proteamaculans 568 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_001480511.1 4753295 R 399741 CDS YP_001480512.1 157372523 5604478 complement(4754819..4757656) 1 NC_009832.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4757656 5604478 Spro_4290 Serratia proteamaculans 568 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001480512.1 4754819 R 399741 CDS YP_001480513.1 157372524 5604479 complement(4757702..4759009) 1 NC_009832.1 PFAM: adenylate cyclase; KEGG: yen:YE3675 hypothetical protein; adenylate cyclase 4759009 5604479 Spro_4291 Serratia proteamaculans 568 adenylate cyclase YP_001480513.1 4757702 R 399741 CDS YP_001480514.1 157372525 5604480 4759290..4759910 1 NC_009832.1 SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein; putative signal transduction protein 4759910 5604480 Spro_4292 Serratia proteamaculans 568 putative signal transduction protein YP_001480514.1 4759290 D 399741 CDS YP_001480515.1 157372526 5604463 4760034..4761278 1 NC_009832.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 4761278 cca 5604463 cca Serratia proteamaculans 568 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_001480515.1 4760034 D 399741 CDS YP_001480516.1 157372527 5604464 complement(4761318..4762142) 1 NC_009832.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 4762142 5604464 Spro_4294 Serratia proteamaculans 568 undecaprenyl pyrophosphate phosphatase YP_001480516.1 4761318 R 399741 CDS YP_001480517.1 157372528 5604465 complement(4762274..4762633) 1 NC_009832.1 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 4762633 folB 5604465 folB Serratia proteamaculans 568 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YP_001480517.1 4762274 R 399741 CDS YP_001480518.1 157372529 5604401 4762741..4763379 1 NC_009832.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 4763379 5604401 Spro_4296 Serratia proteamaculans 568 putative glycerol-3-phosphate acyltransferase PlsY YP_001480518.1 4762741 D 399741 CDS YP_001480519.1 157372530 5604402 complement(4763414..4764427) 1 NC_009832.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 4764427 5604402 Spro_4297 Serratia proteamaculans 568 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001480519.1 4763414 R 399741 CDS YP_001480520.1 157372531 5604403 4764752..4764967 1 NC_009832.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4764967 rpsU 5604403 rpsU Serratia proteamaculans 568 30S ribosomal protein S21 YP_001480520.1 4764752 D 399741 CDS YP_001480521.1 157372532 5604407 4765104..4766852 1 NC_009832.1 synthesizes RNA primers at the replication forks; DNA primase 4766852 dnaG 5604407 dnaG Serratia proteamaculans 568 DNA primase YP_001480521.1 4765104 D 399741 CDS YP_001480522.1 157372533 5604408 4766903..4768846 1 NC_009832.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 4768846 5604408 Spro_4300 Serratia proteamaculans 568 RNA polymerase sigma factor RpoD YP_001480522.1 4766903 D 399741 CDS YP_001480523.1 157372534 5604409 complement(4769345..4769833) 1 NC_009832.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: eca:ECA0679 G/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 4769833 5604409 Spro_4301 Serratia proteamaculans 568 G/U mismatch-specific DNA glycosylase YP_001480523.1 4769345 R 399741 CDS YP_001480524.1 157372535 5603044 complement(4770153..4770869) 1 NC_009832.1 PFAM: HPP family protein?; KEGG: reh:H16_A0686 CBS-domain-containing membrane protein; HPP family protein 4770869 5603044 Spro_4302 Serratia proteamaculans 568 HPP family protein YP_001480524.1 4770153 R 399741 CDS YP_001480525.1 157372536 5604361 4771041..4771676 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE1848 putative transferase; glutathione S-transferase domain-containing protein 4771676 5604361 Spro_4303 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001480525.1 4771041 D 399741 CDS YP_001480526.1 157372537 5604362 complement(4771748..4772992) 1 NC_009832.1 PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: kpn:KPN_03823 probable aromatic amino acid transporter; aromatic amino acid permease 4772992 5604362 Spro_4304 Serratia proteamaculans 568 aromatic amino acid permease YP_001480526.1 4771748 R 399741 CDS YP_001480527.1 157372538 5604336 complement(4773051..4774505) 1 NC_009832.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: eca:ECA2054 succinate-semialdehyde dehydrogenase [NADP+]; succinic semialdehyde dehydrogenase 4774505 5604336 Spro_4305 Serratia proteamaculans 568 succinic semialdehyde dehydrogenase YP_001480527.1 4773051 R 399741 CDS YP_001480528.1 157372539 5604337 complement(4774519..4775784) 1 NC_009832.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 4775784 5604337 Spro_4306 Serratia proteamaculans 568 4-aminobutyrate aminotransferase YP_001480528.1 4774519 R 399741 CDS YP_001480529.1 157372540 5604338 4775913..4777379 1 NC_009832.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: pin:Ping_0569 transcriptional regulator (GntR family) with HTH domain; transcriptional regulator 4777379 5604338 Spro_4307 Serratia proteamaculans 568 transcriptional regulator YP_001480529.1 4775913 D 399741 CDS YP_001480530.1 157372541 5604312 complement(4777393..4779012) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_03920 putative ATP-binding component of a transport system; ABC transporter-like protein 4779012 5604312 Spro_4308 Serratia proteamaculans 568 ABC transporter-like protein YP_001480530.1 4777393 R 399741 CDS YP_001480531.1 157372542 5604313 4779311..4781332 1 NC_009832.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypi:YpsIP31758_0501 2,4-dienoyl-coa reductase; NADH:flavin oxidoreductase/NADH oxidase 4781332 5604313 Spro_4309 Serratia proteamaculans 568 NADH:flavin oxidoreductase/NADH oxidase YP_001480531.1 4779311 D 399741 CDS YP_001480532.1 157372543 5604314 4781418..4781690 1 NC_009832.1 PFAM: helix-turn-helix domain protein; KEGG: pha:PSHAa0452 transcriptional regulator; helix-turn-helix domain-containing protein 4781690 5604314 Spro_4310 Serratia proteamaculans 568 helix-turn-helix domain-containing protein YP_001480532.1 4781418 D 399741 CDS YP_001480533.1 157372544 5606424 4781683..4782939 1 NC_009832.1 PFAM: HipA domain protein; KEGG: mmw:Mmwyl1_4376 HipA domain protein; HipA domain-containing protein 4782939 5606424 Spro_4311 Serratia proteamaculans 568 HipA domain-containing protein YP_001480533.1 4781683 D 399741 CDS YP_001480534.1 157372545 5606425 complement(4782933..4784072) 1 NC_009832.1 PFAM: methyltransferase small; KEGG: ypi:YpsIP31758_0500 methyltransferase family protein; rRNA (guanine-N(2)-)-methyltransferase 4784072 5606425 Spro_4312 Serratia proteamaculans 568 rRNA (guanine-N(2)-)-methyltransferase YP_001480534.1 4782933 R 399741 CDS YP_001480535.1 157372546 5606426 4784366..4784593 1 NC_009832.1 PFAM: plasmid maintenance system killer; KEGG: vco:VC0395_0930 putative killer protein; plasmid maintenance system killer 4784593 5606426 Spro_4313 Serratia proteamaculans 568 plasmid maintenance system killer YP_001480535.1 4784366 D 399741 CDS YP_001480536.1 157372547 5606397 4784608..4784931 1 NC_009832.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: plu:plu2984 hypothetical protein; XRE family plasmid maintenance system antidote protein 4784931 5606397 Spro_4314 Serratia proteamaculans 568 XRE family plasmid maintenance system antidote protein YP_001480536.1 4784608 D 399741 CDS YP_001480537.1 157372548 5606398 4784924..4785436 1 NC_009832.1 PFAM: protein of unknown function DUF45; KEGG: yen:YE3701 hypothetical protein; hypothetical protein 4785436 5606398 Spro_4315 Serratia proteamaculans 568 hypothetical protein YP_001480537.1 4784924 D 399741 CDS YP_001480538.1 157372549 5606399 4785487..4786467 1 NC_009832.1 PFAM: oxidoreductase domain protein; KEGG: yen:YE3702 putative MocA-family oxidoreductase; oxidoreductase domain-containing protein 4786467 5606399 Spro_4316 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001480538.1 4785487 D 399741 CDS YP_001480539.1 157372550 5606616 4786469..4787200 1 NC_009832.1 PFAM: glutamine amidotransferase class-I; KEGG: bpe:BP1437 glutamine amidotransferase; glutamine amidotransferase class-I 4787200 5606616 Spro_4317 Serratia proteamaculans 568 glutamine amidotransferase class-I YP_001480539.1 4786469 D 399741 CDS YP_001480540.1 157372551 5606617 4787459..4788436 1 NC_009832.1 PFAM: Integral membrane protein TerC; KEGG: yen:YE3703 putative drug efflux protein; integral membrane protein TerC 4788436 5606617 Spro_4318 Serratia proteamaculans 568 integral membrane protein TerC YP_001480540.1 4787459 D 399741 CDS YP_001480541.1 157372552 5606618 4788702..4789937 1 NC_009832.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 4789937 5606618 Spro_4319 Serratia proteamaculans 568 serine/threonine transporter SstT YP_001480541.1 4788702 D 399741 CDS YP_001480542.1 157372553 5606956 complement(4790002..4791492) 1 NC_009832.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: ypi:YpsIP31758_0493 altronate dehydratase; Altronate dehydratase 4791492 5606956 Spro_4320 Serratia proteamaculans 568 Altronate dehydratase YP_001480542.1 4790002 R 399741 CDS YP_001480543.1 157372554 5606957 complement(4791513..4792925) 1 NC_009832.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 4792925 5606957 Spro_4321 Serratia proteamaculans 568 glucuronate isomerase YP_001480543.1 4791513 R 399741 CDS YP_001480544.1 157372555 5606958 4793315..4794613 1 NC_009832.1 TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0644 galacturonate transporter; d-galactonate transporter 4794613 5606958 Spro_4322 Serratia proteamaculans 568 d-galactonate transporter YP_001480544.1 4793315 D 399741 CDS YP_001480545.1 157372556 5605035 4794730..4795506 1 NC_009832.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 4795506 5605035 Spro_4323 Serratia proteamaculans 568 DNA-binding transcriptional repressor ExuR YP_001480545.1 4794730 D 399741 CDS YP_001480546.1 157372557 5605036 4795691..4796137 1 NC_009832.1 KEGG: yen:YE3711 putative lipoprotein; putative lipoprotein 4796137 5605036 Spro_4324 Serratia proteamaculans 568 putative lipoprotein YP_001480546.1 4795691 D 399741 CDS YP_001480547.1 157372558 5605037 4796278..4796949 1 NC_009832.1 PFAM: SNARE associated Golgi protein; KEGG: ypi:YpsIP31758_0487 hypothetical protein; hypothetical protein 4796949 5605037 Spro_4325 Serratia proteamaculans 568 hypothetical protein YP_001480547.1 4796278 D 399741 CDS YP_001480548.1 157372559 5603903 4796949..4797320 1 NC_009832.1 KEGG: yen:YE3713 hypothetical protein; hypothetical protein 4797320 5603903 Spro_4326 Serratia proteamaculans 568 hypothetical protein YP_001480548.1 4796949 D 399741 CDS YP_001480549.1 157372560 5603904 4797545..4797916 1 NC_009832.1 PFAM: protein of unknown function DUF1090; KEGG: ypi:YpsIP31758_0485 hypothetical protein; hypothetical protein 4797916 5603904 Spro_4327 Serratia proteamaculans 568 hypothetical protein YP_001480549.1 4797545 D 399741 CDS YP_001480550.1 157372561 5603905 4798081..4798386 1 NC_009832.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: ypi:YpsIP31758_0483 hypothetical protein; hypothetical protein 4798386 5603905 Spro_4328 Serratia proteamaculans 568 hypothetical protein YP_001480550.1 4798081 D 399741 CDS YP_001480551.1 157372562 5606580 4798389..4798790 1 NC_009832.1 KEGG: yen:YE3716 hypothetical protein; hypothetical protein 4798790 5606580 Spro_4329 Serratia proteamaculans 568 hypothetical protein YP_001480551.1 4798389 D 399741 CDS YP_001480552.1 157372563 5606581 4798787..4799074 1 NC_009832.1 KEGG: eca:ECA0637 hypothetical protein; hypothetical protein 4799074 5606581 Spro_4330 Serratia proteamaculans 568 hypothetical protein YP_001480552.1 4798787 D 399741 CDS YP_001480553.1 157372564 5606582 4799370..4799765 1 NC_009832.1 PFAM: DoxX family protein; KEGG: yen:YE3718 hypothetical protein; DoxX family protein 4799765 5606582 Spro_4331 Serratia proteamaculans 568 DoxX family protein YP_001480553.1 4799370 D 399741 CDS YP_001480554.1 157372565 5606348 4799839..4800825 1 NC_009832.1 KEGG: yen:YE3719 hypothetical protein; hypothetical protein 4800825 5606348 Spro_4332 Serratia proteamaculans 568 hypothetical protein YP_001480554.1 4799839 D 399741 CDS YP_001480555.1 157372566 5606349 complement(4800863..4801768) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3720 LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 4801768 5606349 Spro_4333 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480555.1 4800863 R 399741 CDS YP_001480556.1 157372567 5606350 4801876..4802577 1 NC_009832.1 PFAM: Pirin domain protein; KEGG: yen:YE3721 hypothetical protein; pirin domain-containing protein 4802577 5606350 Spro_4334 Serratia proteamaculans 568 pirin domain-containing protein YP_001480556.1 4801876 D 399741 CDS YP_001480557.1 157372568 5603045 complement(4803056..4803919) 1 NC_009832.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ypi:YpsIP31758_0476 putative tetrapyrrole methylase; uroporphyrin-III C/tetrapyrrole methyltransferase 4803919 5603045 Spro_4335 Serratia proteamaculans 568 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001480557.1 4803056 R 399741 CDS YP_001480558.1 157372569 5605807 4803982..4806006 1 NC_009832.1 PFAM: LppC family lipoprotein; KEGG: yen:YE3727 hypothetical protein; LppC family lipoprotein 4806006 5605807 Spro_4336 Serratia proteamaculans 568 LppC family lipoprotein YP_001480558.1 4803982 D 399741 CDS YP_001480559.1 157372570 5605808 4806003..4806356 1 NC_009832.1 PFAM: protein of unknown function UPF0102; KEGG: ypi:YpsIP31758_0474 hypothetical protein; hypothetical protein 4806356 5605808 Spro_4337 Serratia proteamaculans 568 hypothetical protein YP_001480559.1 4806003 D 399741 CDS YP_001480560.1 157372571 5605637 4806408..4806998 1 NC_009832.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 4806998 5605637 Spro_4338 Serratia proteamaculans 568 DnaA initiator-associating protein DiaA YP_001480560.1 4806408 D 399741 CDS YP_001480561.1 157372572 5605638 4807008..4807583 1 NC_009832.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: eca:ECA0319 putative lipoprotein; hypothetical protein 4807583 5605638 Spro_4339 Serratia proteamaculans 568 hypothetical protein YP_001480561.1 4807008 D 399741 CDS YP_001480562.1 157372573 5605639 complement(4807664..4808395) 1 NC_009832.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 4808395 mtgA 5605639 mtgA Serratia proteamaculans 568 monofunctional biosynthetic peptidoglycan transglycosylase YP_001480562.1 4807664 R 399741 CDS YP_001480563.1 157372574 5605207 complement(4808392..4809045) 1 NC_009832.1 PFAM: ThiJ/PfpI domain protein; KEGG: yen:YE3732 enhancing lycopene biosynthesis protein 2; isoprenoid biosynthesis protein with amidotransferase-like domain 4809045 5605207 Spro_4341 Serratia proteamaculans 568 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001480563.1 4808392 R 399741 CDS YP_001480564.1 157372575 5605208 complement(4809283..4811622) 1 NC_009832.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 4811622 5605208 Spro_4342 Serratia proteamaculans 568 aerobic respiration control sensor protein ArcB YP_001480564.1 4809283 R 399741 CDS YP_001480565.1 157372576 5605209 complement(4811715..4812653) 1 NC_009832.1 KEGG: yen:YE3734 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 4812653 5605209 Spro_4343 Serratia proteamaculans 568 putative radical SAM protein YP_001480565.1 4811715 R 399741 CDS YP_001480566.1 157372577 5605438 4813347..4817807 1 NC_009832.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 4817807 gltB 5605438 gltB Serratia proteamaculans 568 glutamate synthase subunit alpha YP_001480566.1 4813347 D 399741 CDS YP_001480567.1 157372578 5605439 4817818..4819236 1 NC_009832.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 4819236 gltD 5605439 gltD Serratia proteamaculans 568 glutamate synthase subunit beta YP_001480567.1 4817818 D 399741 CDS YP_001480568.1 157372579 5605440 complement(4819357..4819854) 1 NC_009832.1 PFAM: Stringent starvation protein B; KEGG: ecv:APECO1_3216 stringent starvation protein B; ClpXP protease specificity-enhancing factor 4819854 5605440 Spro_4346 Serratia proteamaculans 568 ClpXP protease specificity-enhancing factor YP_001480568.1 4819357 R 399741 CDS YP_001480569.1 157372580 5605389 complement(4819860..4820501) 1 NC_009832.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 4820501 sspA 5605389 sspA Serratia proteamaculans 568 stringent starvation protein A YP_001480569.1 4819860 R 399741 CDS YP_001480570.1 157372581 5605390 complement(4820838..4821230) 1 NC_009832.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 4821230 rpsI 5605390 rpsI Serratia proteamaculans 568 30S ribosomal protein S9 YP_001480570.1 4820838 R 399741 CDS YP_001480571.1 157372582 5605391 complement(4821246..4821674) 1 NC_009832.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4821674 rplM 5605391 rplM Serratia proteamaculans 568 50S ribosomal protein L13 YP_001480571.1 4821246 R 399741 CDS YP_001480572.1 157372583 5604333 complement(4821951..4823081) 1 NC_009832.1 PFAM: AFG1-family ATPase; KEGG: yen:YE3742 hypothetical protein; AFG1 family ATPase 4823081 5604333 Spro_4350 Serratia proteamaculans 568 AFG1 family ATPase YP_001480572.1 4821951 R 399741 CDS YP_001480573.1 157372584 5604334 4823313..4823714 1 NC_009832.1 PFAM: protein of unknown function DUF1043; KEGG: yen:YE3743 hypothetical protein; cytochrome d ubiquinol oxidase subunit III 4823714 5604334 Spro_4351 Serratia proteamaculans 568 cytochrome d ubiquinol oxidase subunit III YP_001480573.1 4823313 D 399741 CDS YP_001480574.1 157372585 5604335 4823910..4825280 1 NC_009832.1 KEGG: eca:ECA0303 exported protease; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4825280 5604335 Spro_4352 Serratia proteamaculans 568 protease Do YP_001480574.1 4823910 D 399741 CDS YP_001480575.1 157372586 5604024 4825377..4826435 1 NC_009832.1 KEGG: sfv:SFV_3262 protease; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; serine endoprotease 4826435 5604024 Spro_4353 Serratia proteamaculans 568 serine endoprotease YP_001480575.1 4825377 D 399741 CDS YP_001480576.1 157372587 5604025 complement(4826505..4827764) 1 NC_009832.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4827764 5604025 Spro_4354 Serratia proteamaculans 568 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001480576.1 4826505 R 399741 CDS YP_001480577.1 157372588 5604026 complement(4827820..4828074) 1 NC_009832.1 PFAM: BolA family protein; KEGG: yen:YE3747 BolA-like protein; BolA family protein 4828074 5604026 Spro_4355 Serratia proteamaculans 568 BolA family protein YP_001480577.1 4827820 R 399741 CDS YP_001480578.1 157372589 5604484 complement(4828215..4828514) 1 NC_009832.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ypi:YpsIP31758_0452 putative anti-anti-sigma factor; anti-sigma-factor antagonist 4828514 5604484 Spro_4356 Serratia proteamaculans 568 anti-sigma-factor antagonist YP_001480578.1 4828215 R 399741 CDS YP_001480579.1 157372590 5604485 complement(4828514..4829143) 1 NC_009832.1 PFAM: toluene tolerance family protein; KEGG: eca:ECA0298 hypothetical protein; toluene tolerance family protein 4829143 5604485 Spro_4357 Serratia proteamaculans 568 toluene tolerance family protein YP_001480579.1 4828514 R 399741 CDS YP_001480580.1 157372591 5604486 complement(4829158..4829709) 1 NC_009832.1 PFAM: Mammalian cell entry related domain protein; KEGG: eca:ECA0297 putative exported protein; hypothetical protein 4829709 5604486 Spro_4358 Serratia proteamaculans 568 hypothetical protein YP_001480580.1 4829158 R 399741 CDS YP_001480581.1 157372592 5604445 complement(4829714..4830496) 1 NC_009832.1 PFAM: protein of unknown function DUF140; KEGG: yen:YE3751 hypothetical protein; hypothetical protein 4830496 5604445 Spro_4359 Serratia proteamaculans 568 hypothetical protein YP_001480581.1 4829714 R 399741 CDS YP_001480582.1 157372593 5604446 complement(4830501..4831316) 1 NC_009832.1 ATP-binding subunit of a putative ABC toluene efflux transporter; putative ABC transporter ATP-binding protein YrbF 4831316 5604446 Spro_4360 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YrbF YP_001480582.1 4830501 R 399741 CDS YP_001480583.1 157372594 5604447 4831620..4832597 1 NC_009832.1 YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; putative calcium/sodium:proton antiporter 4832597 5604447 Spro_4361 Serratia proteamaculans 568 putative calcium/sodium:proton antiporter YP_001480583.1 4831620 D 399741 CDS YP_001480584.1 157372595 5604433 4832618..4833604 1 NC_009832.1 KEGG: yen:YE3754 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); D-arabinose 5-phosphate isomerase 4833604 5604433 Spro_4362 Serratia proteamaculans 568 D-arabinose 5-phosphate isomerase YP_001480584.1 4832618 D 399741 CDS YP_001480585.1 157372596 5604434 4833607..4834176 1 NC_009832.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4834176 5604434 Spro_4363 Serratia proteamaculans 568 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001480585.1 4833607 D 399741 CDS YP_001480586.1 157372597 5604435 4834173..4834751 1 NC_009832.1 PFAM: protein of unknown function DUF1239; KEGG: yen:YE3756 hypothetical protein; hypothetical protein 4834751 5604435 Spro_4364 Serratia proteamaculans 568 hypothetical protein YP_001480586.1 4834173 D 399741 CDS YP_001480587.1 157372598 5604275 4834720..4835259 1 NC_009832.1 LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA 4835259 5604275 Spro_4365 Serratia proteamaculans 568 lipopolysaccharide transport periplasmic protein LptA YP_001480587.1 4834720 D 399741 CDS YP_001480588.1 157372599 5604276 4835266..4835991 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3758 probable ABC transporter ATP-binding protein; putative ABC transporter ATP-binding protein YhbG 4835991 5604276 Spro_4366 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YhbG YP_001480588.1 4835266 D 399741 CDS YP_001480589.1 157372600 5604277 4836042..4837475 1 NC_009832.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4837475 5604277 Spro_4367 Serratia proteamaculans 568 RNA polymerase factor sigma-54 YP_001480589.1 4836042 D 399741 CDS YP_001480590.1 157372601 5604050 4837499..4837786 1 NC_009832.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; putative sigma(54) modulation protein 4837786 5604050 Spro_4368 Serratia proteamaculans 568 putative sigma(54) modulation protein YP_001480590.1 4837499 D 399741 CDS YP_001480591.1 157372602 5604051 4837950..4838411 1 NC_009832.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: yen:YE3761 nitrogen regulatory IIA protein; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 4838411 5604051 Spro_4369 Serratia proteamaculans 568 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001480591.1 4837950 D 399741 CDS YP_001480592.1 157372603 5604052 4838543..4839397 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: ypi:YpsIP31758_0438 P-loop ATPase protein family; hypothetical protein 4839397 5604052 Spro_4370 Serratia proteamaculans 568 hypothetical protein YP_001480592.1 4838543 D 399741 CDS YP_001480593.1 157372604 5603962 4839394..4839666 1 NC_009832.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: yen:YE3763 putative phosphocarrier protein; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 4839666 5603962 Spro_4371 Serratia proteamaculans 568 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YP_001480593.1 4839394 D 399741 CDS YP_001480594.1 157372605 5603963 complement(4839722..4841638) 1 NC_009832.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; M trans-acting positive regulator; PRD domain protein; Helix-turn-helix type 11 domain protein; KEGG: yen:YE3777 putative transcriptional regulator; transcriptional antiterminator, BglG 4841638 5603963 Spro_4372 Serratia proteamaculans 568 transcriptional antiterminator, BglG YP_001480594.1 4839722 R 399741 CDS YP_001480595.1 157372606 5603964 complement(4841690..4842904) 1 NC_009832.1 KEGG: yen:YE3778 hypothetical protein; 6-phosphogluconolactonase 4842904 5603964 Spro_4373 Serratia proteamaculans 568 6-phosphogluconolactonase YP_001480595.1 4841690 R 399741 CDS YP_001480596.1 157372607 5603924 complement(4842997..4843737) 1 NC_009832.1 PFAM: protein of unknown function DUF1341; KEGG: ent:Ent638_0431 protein of unknown function DUF1341; hypothetical protein 4843737 5603924 Spro_4374 Serratia proteamaculans 568 hypothetical protein YP_001480596.1 4842997 R 399741 CDS YP_001480597.1 157372608 5603925 complement(4843734..4844852) 1 NC_009832.1 TIGRFAM: pyridoxal phosphate-dependent enzyme, putative; PFAM: L-seryl-tRNA selenium transferase; KEGG: yen:YE3780 possible L-seryl-tRNA selenocysteine synthase; pyridoxal phosphate-dependent enzyme 4844852 5603925 Spro_4375 Serratia proteamaculans 568 pyridoxal phosphate-dependent enzyme YP_001480597.1 4843734 R 399741 CDS YP_001480598.1 157372609 5603926 complement(4844836..4845975) 1 NC_009832.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4845975 5603926 Spro_4376 Serratia proteamaculans 568 dihydroorotase YP_001480598.1 4844836 R 399741 CDS YP_001480599.1 157372610 5603708 complement(4846038..4846691) 1 NC_009832.1 KEGG: yen:YE3782 putative inner membrane protein; hypothetical protein 4846691 5603708 Spro_4377 Serratia proteamaculans 568 hypothetical protein YP_001480599.1 4846038 R 399741 CDS YP_001480600.1 157372611 5603709 complement(4846700..4847476) 1 NC_009832.1 KEGG: yen:YE3783 hypothetical protein; hypothetical protein 4847476 5603709 Spro_4378 Serratia proteamaculans 568 hypothetical protein YP_001480600.1 4846700 R 399741 CDS YP_001480601.1 157372612 5603710 complement(4847507..4847803) 1 NC_009832.1 KEGG: yen:YE3784 hypothetical protein; hypothetical protein 4847803 5603710 Spro_4379 Serratia proteamaculans 568 hypothetical protein YP_001480601.1 4847507 R 399741 CDS YP_001480602.1 157372613 5607222 complement(4847803..4848168) 1 NC_009832.1 KEGG: yen:YE3785 hypothetical protein; hypothetical protein 4848168 5607222 Spro_4380 Serratia proteamaculans 568 hypothetical protein YP_001480602.1 4847803 R 399741 CDS YP_001480603.1 157372614 5607223 complement(4848203..4848550) 1 NC_009832.1 PFAM: PRD domain protein; KEGG: yen:YE3786 hypothetical protein; PRD domain-containing protein 4848550 5607223 Spro_4381 Serratia proteamaculans 568 PRD domain-containing protein YP_001480603.1 4848203 R 399741 CDS YP_001480604.1 157372615 5607224 4848974..4849384 1 NC_009832.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 4849384 5607224 Spro_4382 Serratia proteamaculans 568 nucleoside diphosphate kinase regulator YP_001480604.1 4848974 D 399741 CDS YP_001480605.1 157372616 5603109 complement(4849442..4849828) 1 NC_009832.1 PFAM: cytochrome b562; KEGG: yen:YE3788 putative cytochrome; cytochrome b562 4849828 5603109 Spro_4383 Serratia proteamaculans 568 cytochrome b562 YP_001480605.1 4849442 R 399741 CDS YP_001480606.1 157372617 5603110 complement(4849980..4851320) 1 NC_009832.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 4851320 5603110 Spro_4384 Serratia proteamaculans 568 peptidase PmbA YP_001480606.1 4849980 R 399741 CDS YP_001480607.1 157372618 5603111 complement(4851496..4851834) 1 NC_009832.1 KEGG: pna:Pnap_0994 uncharacterized conserved small protein-like protein; hypothetical protein 4851834 5603111 Spro_4385 Serratia proteamaculans 568 hypothetical protein YP_001480607.1 4851496 R 399741 CDS YP_001480608.1 157372619 5602926 complement(4851831..4852181) 1 NC_009832.1 PFAM: protein of unknown function DUF891; KEGG: spt:SPA3745 hypothetical protein; hypothetical protein 4852181 5602926 Spro_4386 Serratia proteamaculans 568 hypothetical protein YP_001480608.1 4851831 R 399741 CDS YP_001480609.1 157372620 5602927 4852369..4852917 1 NC_009832.1 PFAM: protein of unknown function DUF615; KEGG: yen:YE3790 hypothetical protein; hypothetical protein 4852917 5602927 Spro_4387 Serratia proteamaculans 568 hypothetical protein YP_001480609.1 4852369 D 399741 CDS YP_001480610.1 157372621 5602928 complement(4852948..4853247) 1 NC_009832.1 PFAM: Barstar (barnase inhibitor); KEGG: yen:YE3791 putative ribonuclease inhibitor; barnase inhibitor 4853247 5602928 Spro_4388 Serratia proteamaculans 568 barnase inhibitor YP_001480610.1 4852948 R 399741 CDS YP_001480611.1 157372622 5606764 complement(4853253..4853702) 1 NC_009832.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: ypi:YpsIP31758_0423 ribonuclease Ba; guanine-specific ribonuclease N1 and T1 4853702 5606764 Spro_4389 Serratia proteamaculans 568 guanine-specific ribonuclease N1 and T1 YP_001480611.1 4853253 R 399741 CDS YP_001480612.1 157372623 5606765 complement(4853946..4855913) 1 NC_009832.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 4855913 5606765 Spro_4390 Serratia proteamaculans 568 p-hydroxybenzoic acid efflux subunit AaeB YP_001480612.1 4853946 R 399741 CDS YP_001480613.1 157372624 5606766 complement(4855913..4856848) 1 NC_009832.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 4856848 5606766 Spro_4391 Serratia proteamaculans 568 p-hydroxybenzoic acid efflux subunit AaeA YP_001480613.1 4855913 R 399741 CDS YP_001480614.1 157372625 5603017 complement(4856856..4857059) 1 NC_009832.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 4857059 5603017 Spro_4392 Serratia proteamaculans 568 hypothetical protein YP_001480614.1 4856856 R 399741 CDS YP_001480615.1 157372626 5603018 4857368..4858279 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3797 probable LysR-family transcriptional regulatory protein; putative DNA-binding transcriptional regulator 4858279 5603018 Spro_4393 Serratia proteamaculans 568 putative DNA-binding transcriptional regulator YP_001480615.1 4857368 D 399741 CDS YP_001480616.1 157372627 5603019 complement(4858242..4858619) 1 NC_009832.1 hypothetical protein 4858619 5603019 Spro_4394 Serratia proteamaculans 568 hypothetical protein YP_001480616.1 4858242 R 399741 CDS YP_001480617.1 157372628 5602987 complement(4858622..4858903) 1 NC_009832.1 KEGG: sfr:Sfri_3475 hypothetical protein; hypothetical protein 4858903 5602987 Spro_4395 Serratia proteamaculans 568 hypothetical protein YP_001480617.1 4858622 R 399741 CDS YP_001480618.1 157372629 5602988 4859112..4860056 1 NC_009832.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: aau:AAur_3646 putative inosine-uridine preferring nucleoside hydrolase (IunH); purine nucleosidase 4860056 5602988 Spro_4396 Serratia proteamaculans 568 purine nucleosidase YP_001480618.1 4859112 D 399741 CDS YP_001480619.1 157372630 5602989 complement(4860594..4860899) 1 NC_009832.1 hypothetical protein 4860899 5602989 Spro_4397 Serratia proteamaculans 568 hypothetical protein YP_001480619.1 4860594 R 399741 CDS YP_001480620.1 157372631 5602795 complement(4860904..4861896) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0514 hypothetical protein; hypothetical protein 4861896 5602795 Spro_4398 Serratia proteamaculans 568 hypothetical protein YP_001480620.1 4860904 R 399741 CDS YP_001480621.1 157372632 5602796 complement(4861893..4862006) 1 NC_009832.1 hypothetical protein 4862006 5602796 Spro_4399 Serratia proteamaculans 568 hypothetical protein YP_001480621.1 4861893 R 399741 CDS YP_001480622.1 157372633 5602797 complement(4862117..4862326) 1 NC_009832.1 KEGG: ypi:YpsIP31758_0514 hypothetical protein; hypothetical protein 4862326 5602797 Spro_4400 Serratia proteamaculans 568 hypothetical protein YP_001480622.1 4862117 R 399741 CDS YP_001480623.1 157372634 5605958 complement(4862437..4862691) 1 NC_009832.1 hypothetical protein 4862691 5605958 Spro_4401 Serratia proteamaculans 568 hypothetical protein YP_001480623.1 4862437 R 399741 CDS YP_001480624.1 157372635 5605959 complement(4862809..4871931) 1 NC_009832.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: eci:UTI89_C4946 putative member of ShlA/HecA/FhaA exoprotein family; filamentous hemagglutinin outer membrane protein 4871931 5605959 Spro_4402 Serratia proteamaculans 568 filamentous hemagglutinin outer membrane protein YP_001480624.1 4862809 R 399741 CDS YP_001480625.1 157372636 5605960 complement(4871958..4873631) 1 NC_009832.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: ent:Ent638_0052 polypeptide-transport-associated domain protein, ShlB-type; polypeptide-transport-associated domain-containing protein 4873631 5605960 Spro_4403 Serratia proteamaculans 568 polypeptide-transport-associated domain-containing protein YP_001480625.1 4871958 R 399741 CDS YP_001480626.1 157372637 5602525 complement(4873919..4875364) 1 NC_009832.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 4875364 tldD 5602525 tldD Serratia proteamaculans 568 protease TldD YP_001480626.1 4873919 R 399741 CDS YP_001480627.1 157372638 5602526 complement(4875372..4876232) 1 NC_009832.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ypi:YpsIP31758_0404 hydrolase, carbon-nitrogen family protein; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4876232 5602526 Spro_4405 Serratia proteamaculans 568 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001480627.1 4875372 R 399741 CDS YP_001480628.1 157372639 5602527 complement(4876229..4880104) 1 NC_009832.1 KEGG: yen:YE3800 hypothetical protein; hypothetical protein 4880104 5602527 Spro_4406 Serratia proteamaculans 568 hypothetical protein YP_001480628.1 4876229 R 399741 CDS YP_001480629.1 157372640 5606786 complement(4880148..4881617) 1 NC_009832.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 4881617 5606786 Spro_4407 Serratia proteamaculans 568 ribonuclease G YP_001480629.1 4880148 R 399741 CDS YP_001480630.1 157372641 5606787 complement(4881656..4882240) 1 NC_009832.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4882240 5606787 Spro_4408 Serratia proteamaculans 568 Maf-like protein YP_001480630.1 4881656 R 399741 CDS YP_001480631.1 157372642 5606788 complement(4882251..4882739) 1 NC_009832.1 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 4882739 5606788 Spro_4409 Serratia proteamaculans 568 rod shape-determining protein MreD YP_001480631.1 4882251 R 399741 CDS YP_001480632.1 157372643 5602812 complement(4882736..4883740) 1 NC_009832.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4883740 5602812 Spro_4410 Serratia proteamaculans 568 rod shape-determining protein MreC YP_001480632.1 4882736 R 399741 CDS YP_001480633.1 157372644 5602813 complement(4883835..4884878) 1 NC_009832.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4884878 5602813 Spro_4411 Serratia proteamaculans 568 rod shape-determining protein MreB YP_001480633.1 4883835 R 399741 CDS YP_001480634.1 157372645 5602814 complement(4885291..4887222) 1 NC_009832.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 4887222 5602814 Spro_4412 Serratia proteamaculans 568 regulatory protein CsrD YP_001480634.1 4885291 R 399741 CDS YP_001480635.1 157372646 5605892 4887516..4888493 1 NC_009832.1 TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ypi:YpsIP31758_0396 putative quinone oxidoreductase, YhdH/YhfP family protein; quinone oxidoreductase 4888493 5605892 Spro_4413 Serratia proteamaculans 568 quinone oxidoreductase YP_001480635.1 4887516 D 399741 CDS YP_001480636.1 157372647 5605893 4888615..4889616 1 NC_009832.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 4889616 5605893 Spro_4414 Serratia proteamaculans 568 putative sulfite oxidase subunit YedY YP_001480636.1 4888615 D 399741 CDS YP_001480637.1 157372648 5605894 4889617..4890216 1 NC_009832.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 4890216 5605894 Spro_4415 Serratia proteamaculans 568 putative sulfite oxidase subunit YedZ YP_001480637.1 4889617 D 399741 CDS YP_001480638.1 157372649 5602964 4890458..4890910 1 NC_009832.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 4890910 5602964 Spro_4416 Serratia proteamaculans 568 3-dehydroquinate dehydratase YP_001480638.1 4890458 D 399741 CDS YP_001480639.1 157372650 5602965 4890943..4891407 1 NC_009832.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: eca:ECA0261 biotin carboxyl carrier protein of acetyl-CoA carboxylase; acetyl-CoA carboxylase, biotin carboxyl carrier protein 4891407 5602965 Spro_4417 Serratia proteamaculans 568 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001480639.1 4890943 D 399741 CDS YP_001480640.1 157372651 5602966 4891418..4892767 1 NC_009832.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 4892767 5602966 Spro_4418 Serratia proteamaculans 568 acetyl-CoA carboxylase biotin carboxylase subunit YP_001480640.1 4891418 D 399741 CDS YP_001480641.1 157372652 5606333 4892908..4893150 1 NC_009832.1 PFAM: protein of unknown function DUF997; KEGG: ent:Ent638_3695 protein of unknown function DUF997; hypothetical protein 4893150 5606333 Spro_4419 Serratia proteamaculans 568 hypothetical protein YP_001480641.1 4892908 D 399741 CDS YP_001480642.1 157372653 5606334 4893140..4894585 1 NC_009832.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 4894585 panF 5606334 panF Serratia proteamaculans 568 sodium/panthothenate symporter YP_001480642.1 4893140 D 399741 CDS YP_001480643.1 157372654 5606335 4894598..4895479 1 NC_009832.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4895479 prmA 5606335 prmA Serratia proteamaculans 568 50S ribosomal protein L11 methyltransferase YP_001480643.1 4894598 D 399741 CDS YP_001480644.1 157372655 5606725 4895666..4896400 1 NC_009832.1 PFAM: carbonic anhydrase; KEGG: eca:ECA0257 carbonic anhydrase; carbonate dehydratase 4896400 5606725 Spro_4422 Serratia proteamaculans 568 carbonate dehydratase YP_001480644.1 4895666 D 399741 CDS YP_001480645.1 157372656 5606726 4896787..4897752 1 NC_009832.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: ypi:YpsIP31758_0386 dihydrouridine synthase; tRNA-dihydrouridine synthase B 4897752 5606726 Spro_4423 Serratia proteamaculans 568 tRNA-dihydrouridine synthase B YP_001480645.1 4896787 D 399741 CDS YP_001480646.1 157372657 5606727 4897774..4898070 1 NC_009832.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 4898070 fis 5606727 fis Serratia proteamaculans 568 DNA-binding protein Fis YP_001480646.1 4897774 D 399741 CDS YP_001480647.1 157372658 5603853 4898427..4899347 1 NC_009832.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 4899347 5603853 Spro_4425 Serratia proteamaculans 568 lipid A biosynthesis palmitoleoyl acyltransferase YP_001480647.1 4898427 D 399741 CDS YP_001480648.1 157372659 5603854 4899467..4900165 1 NC_009832.1 KEGG: ent:Ent638_1664 CTP synthase; hypothetical protein 4900165 5603854 Spro_4426 Serratia proteamaculans 568 hypothetical protein YP_001480648.1 4899467 D 399741 CDS YP_001480649.1 157372660 5603855 complement(4900215..4900904) 1 NC_009832.1 PFAM: LrgB family protein; KEGG: yen:YE3837 putative inner membrane protein; LrgB family protein 4900904 5603855 Spro_4427 Serratia proteamaculans 568 LrgB family protein YP_001480649.1 4900215 R 399741 CDS YP_001480650.1 157372661 5603918 complement(4900897..4901319) 1 NC_009832.1 PFAM: LrgA family protein; KEGG: ent:Ent638_0272 LrgA family protein; LrgA family protein 4901319 5603918 Spro_4428 Serratia proteamaculans 568 LrgA family protein YP_001480650.1 4900897 R 399741 CDS YP_001480651.1 157372662 5603919 4901459..4902346 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3838 putative LysR family transcriptional regulator; LysR family transcriptional regulator 4902346 5603919 Spro_4429 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480651.1 4901459 D 399741 CDS YP_001480652.1 157372663 5603920 complement(4902376..4904025) 1 NC_009832.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: yen:YE3839 putative putative Na(+)/H(+) exchanger protein; Na+/H+ antiporter 4904025 5603920 Spro_4430 Serratia proteamaculans 568 Na+/H+ antiporter YP_001480652.1 4902376 R 399741 CDS YP_001480653.1 157372664 5603989 complement(4904210..4905571) 1 NC_009832.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: yps:YPTB3600 putative xanthine/uracil permease; xanthine/uracil/vitamin C permease 4905571 5603989 Spro_4431 Serratia proteamaculans 568 xanthine/uracil/vitamin C permease YP_001480653.1 4904210 R 399741 CDS YP_001480654.1 157372665 5603990 complement(4905908..4906315) 1 NC_009832.1 KEGG: reh:H16_B2255 lactoylglutathione lyase; lactoylglutathione lyase 4906315 5603990 Spro_4432 Serratia proteamaculans 568 lactoylglutathione lyase YP_001480654.1 4905908 R 399741 CDS YP_001480655.1 157372666 5603991 complement(4906363..4907031) 1 NC_009832.1 PFAM: Glutathione S-transferase domain; KEGG: yen:YE3841 putative glutathione S transferase; glutathione S-transferase domain-containing protein 4907031 5603991 Spro_4433 Serratia proteamaculans 568 glutathione S-transferase domain-containing protein YP_001480655.1 4906363 R 399741 CDS YP_001480656.1 157372667 5604018 complement(4907028..4907471) 1 NC_009832.1 KEGG: yen:YE3390 hypothetical protein; hypothetical protein 4907471 5604018 Spro_4434 Serratia proteamaculans 568 hypothetical protein YP_001480656.1 4907028 R 399741 CDS YP_001480657.1 157372668 5604019 4907683..4907943 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: yen:YE2851 hypothetical protein; hypothetical protein 4907943 5604019 Spro_4435 Serratia proteamaculans 568 hypothetical protein YP_001480657.1 4907683 D 399741 CDS YP_001480658.1 157372669 5604020 complement(4908000..4908917) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_1861 transcriptional regulator, LysR family; LysR family transcriptional regulator 4908917 5604020 Spro_4436 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480658.1 4908000 R 399741 CDS YP_001480659.1 157372670 5604035 4909048..4909797 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mms:mma_1860 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4909797 5604035 Spro_4437 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480659.1 4909048 D 399741 CDS YP_001480660.1 157372671 5604036 4910068..4911618 1 NC_009832.1 PFAM: Lytic transglycosylase catalytic; SMART: extracellular solute-binding protein family 3; KEGG: kpn:KPN_04447 putative periplasmic binding protein of transport system; lytic transglycosylase 4911618 5604036 Spro_4438 Serratia proteamaculans 568 lytic transglycosylase YP_001480660.1 4910068 D 399741 CDS YP_001480661.1 157372672 5604037 complement(4911697..4912242) 1 NC_009832.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein; single-strand binding protein 4912242 5604037 Spro_4439 Serratia proteamaculans 568 single-strand binding protein YP_001480661.1 4911697 R 399741 CDS YP_001480662.1 157372673 5604079 4912520..4915351 1 NC_009832.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 4915351 uvrA 5604079 uvrA Serratia proteamaculans 568 excinuclease ABC subunit A YP_001480662.1 4912520 D 399741 CDS YP_001480663.1 157372674 5604080 4915574..4916626 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bvi:Bcep1808_3188 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4916626 5604080 Spro_4441 Serratia proteamaculans 568 alcohol dehydrogenase YP_001480663.1 4915574 D 399741 CDS YP_001480664.1 157372675 5604081 complement(4916665..4917222) 1 NC_009832.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ent:Ent638_0939 transferase hexapeptide repeat containing protein; maltose O-acetyltransferase 4917222 5604081 Spro_4442 Serratia proteamaculans 568 maltose O-acetyltransferase YP_001480664.1 4916665 R 399741 CDS YP_001480665.1 157372676 5604257 complement(4917387..4917740) 1 NC_009832.1 PFAM: protein of unknown function DUF419; KEGG: yen:YE3846 hypothetical protein; hypothetical protein 4917740 5604257 Spro_4443 Serratia proteamaculans 568 hypothetical protein YP_001480665.1 4917387 R 399741 CDS YP_001480666.1 157372677 5604258 complement(4917745..4918161) 1 NC_009832.1 PFAM: protein of unknown function UPF0047; KEGG: kpn:KPN_04443 hypothetical protein; hypothetical protein 4918161 5604258 Spro_4444 Serratia proteamaculans 568 hypothetical protein YP_001480666.1 4917745 R 399741 CDS YP_001480667.1 157372678 5604259 complement(4918284..4919477) 1 NC_009832.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4919477 5604259 Spro_4445 Serratia proteamaculans 568 aromatic amino acid aminotransferase YP_001480667.1 4918284 R 399741 CDS YP_001480668.1 157372679 5604263 complement(4919559..4920026) 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: eca:ECA3668 AsnC-family transcriptional regulator; AsnC family transcriptional regulator 4920026 5604263 Spro_4446 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001480668.1 4919559 R 399741 CDS YP_001480669.1 157372680 5604264 4920241..4921008 1 NC_009832.1 PFAM: extracellular solute-binding protein family 3; KEGG: pfo:Pfl_3814 extracellular solute-binding protein, family 3; arogenate dehydratase 4921008 5604264 Spro_4447 Serratia proteamaculans 568 arogenate dehydratase YP_001480669.1 4920241 D 399741 CDS YP_001480670.1 157372681 5604265 complement(4921051..4922130) 1 NC_009832.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4922130 alr 5604265 alr Serratia proteamaculans 568 alanine racemase YP_001480670.1 4921051 R 399741 CDS YP_001480671.1 157372682 5604283 complement(4922148..4923572) 1 NC_009832.1 unwinds double stranded DNA; replicative DNA helicase 4923572 5604283 Spro_4449 Serratia proteamaculans 568 replicative DNA helicase YP_001480671.1 4922148 R 399741 CDS YP_001480672.1 157372683 5604284 4923750..4924739 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA3663 quinone oxidoreductase; NADPH-dependent quinone oxidoreductase 4924739 5604284 Spro_4450 Serratia proteamaculans 568 NADPH-dependent quinone oxidoreductase YP_001480672.1 4923750 D 399741 CDS YP_001480673.1 157372684 5604285 4924858..4925289 1 NC_009832.1 PFAM: protein of unknown function DUF1311; KEGG: pen:PSEEN0989 hypothetical protein; hypothetical protein 4925289 5604285 Spro_4451 Serratia proteamaculans 568 hypothetical protein YP_001480673.1 4924858 D 399741 CDS YP_001480674.1 157372685 5604298 complement(4925600..4925818) 1 NC_009832.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 4925818 pspG 5604298 pspG Serratia proteamaculans 568 phage shock protein G YP_001480674.1 4925600 R 399741 CDS YP_001480675.1 157372686 5604299 complement(4925978..4926988) 1 NC_009832.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: stt:t4149 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 4926988 5604299 Spro_4453 Serratia proteamaculans 568 tRNA-dihydrouridine synthase A YP_001480675.1 4925978 R 399741 CDS YP_001480676.1 157372687 5604300 4927194..4927727 1 NC_009832.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: ent:Ent638_3118 TPR repeat-containing protein; TPR repeat-containing protein 4927727 5604300 Spro_4454 Serratia proteamaculans 568 TPR repeat-containing protein YP_001480676.1 4927194 D 399741 CDS YP_001480677.1 157372688 5606189 4927817..4928266 1 NC_009832.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ret:RHE_CH00746 RNA polymerase sigma factor protein (sigma-24); ECF subfamily RNA polymerase sigma-24 factor 4928266 5606189 Spro_4455 Serratia proteamaculans 568 ECF subfamily RNA polymerase sigma-24 factor YP_001480677.1 4927817 D 399741 CDS YP_001480678.1 157372689 5606190 4928263..4929021 1 NC_009832.1 KEGG: pfo:Pfl_2886 predicted transmembrane transcriptional regulator (anti-sigma-factor); putative transmembrane anti-sigma factor 4929021 5606190 Spro_4456 Serratia proteamaculans 568 putative transmembrane anti-sigma factor YP_001480678.1 4928263 D 399741 CDS YP_001480679.1 157372690 5606191 4929178..4929690 1 NC_009832.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 4929690 5606191 Spro_4457 Serratia proteamaculans 568 zinc uptake transcriptional repressor YP_001480679.1 4929178 D 399741 CDS YP_001480680.1 157372691 5606671 complement(4929807..4930016) 1 NC_009832.1 unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; putative stress-response protein 4930016 5606671 Spro_4458 Serratia proteamaculans 568 putative stress-response protein YP_001480680.1 4929807 R 399741 CDS YP_001480681.1 157372692 5606672 complement(4930301..4931665) 1 NC_009832.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: kpn:KPN_04432 DNA-damage-inducible protein F; DNA-damage-inducible SOS response protein 4931665 5606672 Spro_4459 Serratia proteamaculans 568 DNA-damage-inducible SOS response protein YP_001480681.1 4930301 R 399741 CDS YP_001480682.1 157372693 5606673 complement(4931958..4932566) 1 NC_009832.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 4932566 5606673 Spro_4460 Serratia proteamaculans 568 LexA repressor YP_001480682.1 4931958 R 399741 CDS YP_001480683.1 157372694 5602698 complement(4932688..4933056) 1 NC_009832.1 PFAM: diacylglycerol kinase; KEGG: sec:SC4115 diacylglycerol kinase; diacylglycerol kinase 4933056 5602698 Spro_4461 Serratia proteamaculans 568 diacylglycerol kinase YP_001480683.1 4932688 R 399741 CDS YP_001480684.1 157372695 5602699 4933206..4935671 1 NC_009832.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4935671 5602699 Spro_4462 Serratia proteamaculans 568 glycerol-3-phosphate acyltransferase YP_001480684.1 4933206 D 399741 CDS YP_001480685.1 157372696 5602700 complement(4935729..4936622) 1 NC_009832.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 4936622 ubiA 5602700 ubiA Serratia proteamaculans 568 4-hydroxybenzoate octaprenyltransferase YP_001480685.1 4935729 R 399741 CDS YP_001480686.1 157372697 5607083 complement(4936619..4937143) 1 NC_009832.1 catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 4937143 ubiC 5607083 ubiC Serratia proteamaculans 568 chorismate pyruvate lyase YP_001480686.1 4936619 R 399741 CDS YP_001480687.1 157372698 5607084 4937543..4938925 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: yen:YE3588 putative transporter protein; major facilitator transporter 4938925 5607084 Spro_4465 Serratia proteamaculans 568 major facilitator transporter YP_001480687.1 4937543 D 399741 CDS YP_001480688.1 157372699 5607085 4938948..4939949 1 NC_009832.1 KEGG: yen:YE3589 LacI family regulatory protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcription regulator 4939949 5607085 Spro_4466 Serratia proteamaculans 568 LacI family transcription regulator YP_001480688.1 4938948 D 399741 CDS YP_001480689.1 157372700 5602511 4939972..4940955 1 NC_009832.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: yen:YE3590 putative hydrolase; inosine/uridine-preferring nucleoside hydrolase 4940955 5602511 Spro_4467 Serratia proteamaculans 568 inosine/uridine-preferring nucleoside hydrolase YP_001480689.1 4939972 D 399741 CDS YP_001480690.1 157372701 5602512 complement(4941011..4941919) 1 NC_009832.1 PFAM: Maltose operon periplasmic; KEGG: yen:YE3861 maltose operon periplasmic protein; maltose regulon periplasmic protein 4941919 5602512 Spro_4468 Serratia proteamaculans 568 maltose regulon periplasmic protein YP_001480690.1 4941011 R 399741 CDS YP_001480691.1 157372702 5602513 complement(4942015..4943319) 1 NC_009832.1 porin involved in the transport of maltose and maltodextrins; maltoporin 4943319 lamB 5602513 lamB Serratia proteamaculans 568 maltoporin YP_001480691.1 4942015 R 399741 CDS YP_001480692.1 157372703 5603062 complement(4943349..4944458) 1 NC_009832.1 with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein 4944458 5603062 Spro_4470 Serratia proteamaculans 568 maltose/maltodextrin transporter ATP-binding protein YP_001480692.1 4943349 R 399741 CDS YP_001480693.1 157372704 5603063 complement(4944451..4945422) 1 NC_009832.1 KEGG: yps:YPTB3644 hypothetical protein; hypothetical protein 4945422 5603063 Spro_4471 Serratia proteamaculans 568 hypothetical protein YP_001480693.1 4944451 R 399741 CDS YP_001480694.1 157372705 5603064 4945782..4946975 1 NC_009832.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein 4946975 malE 5603064 malE Serratia proteamaculans 568 maltose ABC transporter periplasmic protein YP_001480694.1 4945782 D 399741 CDS YP_001480695.1 157372706 5606940 4947039..4948616 1 NC_009832.1 with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 4948616 malF 5606940 malF Serratia proteamaculans 568 maltose transporter membrane protein YP_001480695.1 4947039 D 399741 CDS YP_001480696.1 157372707 5606941 4948628..4949518 1 NC_009832.1 with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease 4949518 malG 5606941 malG Serratia proteamaculans 568 maltose transporter permease YP_001480696.1 4948628 D 399741 CDS YP_001480697.1 157372708 5606942 complement(4949812..4950219) 1 NC_009832.1 PFAM: phosphate-starvation-inducible E; KEGG: yen:YE3869 hypothetical protein; phosphate-starvation-inducible protein PsiE 4950219 5606942 Spro_4475 Serratia proteamaculans 568 phosphate-starvation-inducible protein PsiE YP_001480697.1 4949812 R 399741 CDS YP_001480698.1 157372709 5602561 4950441..4951874 1 NC_009832.1 KEGG: kpn:KPN_02513 hypothetical protein; hypothetical protein 4951874 5602561 Spro_4476 Serratia proteamaculans 568 hypothetical protein YP_001480698.1 4950441 D 399741 CDS YP_001480699.1 157372710 5602562 complement(4951937..4953583) 1 NC_009832.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4953583 pgi 5602562 pgi Serratia proteamaculans 568 glucose-6-phosphate isomerase YP_001480699.1 4951937 R 399741 CDS YP_001480700.1 157372711 5602563 4953857..4955665 1 NC_009832.1 PFAM: sodium/hydrogen exchanger; KEGG: asa:ASA_3754 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger 4955665 5602563 Spro_4478 Serratia proteamaculans 568 sodium/hydrogen exchanger YP_001480700.1 4953857 D 399741 CDS YP_001480701.1 157372712 5602779 4956021..4957388 1 NC_009832.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 4957388 5602779 Spro_4479 Serratia proteamaculans 568 aspartate kinase III YP_001480701.1 4956021 D 399741 CDS YP_001480702.1 157372713 5602780 4957533..4958450 1 NC_009832.1 PFAM: Bile acid:sodium symporter; KEGG: kpn:KPN_04411 putative cytochrome oxidase; bile acid:sodium symporter 4958450 5602780 Spro_4480 Serratia proteamaculans 568 bile acid:sodium symporter YP_001480702.1 4957533 D 399741 CDS YP_001480703.1 157372714 5602781 4958837..4960513 1 NC_009832.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: plu:plu0317 PhlA hemolysin secretion/activation protein PhlB; hemolysin activator HlyB domain-containing protein 4960513 5602781 Spro_4481 Serratia proteamaculans 568 hemolysin activator HlyB domain-containing protein YP_001480703.1 4958837 D 399741 CDS YP_001480704.1 157372715 5603088 4960559..4965406 1 NC_009832.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: yps:YPTB3652 hemolysin; filamentous hemagglutinin outer membrane protein 4965406 5603088 Spro_4482 Serratia proteamaculans 568 filamentous hemagglutinin outer membrane protein YP_001480704.1 4960559 D 399741 CDS YP_001480705.1 157372716 5603089 complement(4965495..4967144) 1 NC_009832.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: eca:ECA3983 putative sodium/phosphate cotransporter; sodium-dependent inorganic phosphate (Pi) transporter 4967144 5603089 Spro_4483 Serratia proteamaculans 568 sodium-dependent inorganic phosphate (Pi) transporter YP_001480705.1 4965495 R 399741 CDS YP_001480706.1 157372717 5603090 complement(4967272..4968264) 1 NC_009832.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pau:PA14_21910 putative ATP-binding component of ABC transporter; ABC transporter-like protein 4968264 5603090 Spro_4484 Serratia proteamaculans 568 ABC transporter-like protein YP_001480706.1 4967272 R 399741 CDS YP_001480707.1 157372718 5606526 complement(4968268..4969053) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pap:PSPA7_1872 probable permease of ABC transporter; binding-protein-dependent transport systems inner membrane component 4969053 5606526 Spro_4485 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001480707.1 4968268 R 399741 CDS YP_001480708.1 157372719 5606527 complement(4969071..4969910) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_4389 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 4969910 5606527 Spro_4486 Serratia proteamaculans 568 binding-protein-dependent transport systems inner membrane component YP_001480708.1 4969071 R 399741 CDS YP_001480709.1 157372720 5606528 complement(4969920..4970717) 1 NC_009832.1 KEGG: pau:PA14_21940 hypothetical protein; hypothetical protein 4970717 5606528 Spro_4487 Serratia proteamaculans 568 hypothetical protein YP_001480709.1 4969920 R 399741 CDS YP_001480710.1 157372721 5607178 complement(4970729..4971790) 1 NC_009832.1 PFAM: extracellular solute-binding protein family 1; KEGG: pau:PA14_21960 putative ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 4971790 5607178 Spro_4488 Serratia proteamaculans 568 extracellular solute-binding protein YP_001480710.1 4970729 R 399741 CDS YP_001480711.1 157372722 5607179 4971982..4972692 1 NC_009832.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: pmy:Pmen_1333 transcriptional regulator, GntR family; GntR family transcriptional regulator 4972692 5607179 Spro_4489 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001480711.1 4971982 D 399741 CDS YP_001480712.1 157372723 5607180 complement(4972730..4976359) 1 NC_009832.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4976359 metH 5607180 metH Serratia proteamaculans 568 B12-dependent methionine synthase YP_001480712.1 4972730 R 399741 CDS YP_001480713.1 157372724 5607118 4976624..4977454 1 NC_009832.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; transcriptional repressor IclR 4977454 5607118 Spro_4491 Serratia proteamaculans 568 transcriptional repressor IclR YP_001480713.1 4976624 D 399741 CDS YP_001480714.1 157372725 5607119 4977787..4978683 1 NC_009832.1 KEGG: ppr:PBPRA2781 hypothetical protein; hypothetical protein 4978683 5607119 Spro_4492 Serratia proteamaculans 568 hypothetical protein YP_001480714.1 4977787 D 399741 CDS YP_001480715.1 157372726 5607120 4979034..4979927 1 NC_009832.1 phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); putative hydrolase 4979927 5607120 Spro_4493 Serratia proteamaculans 568 putative hydrolase YP_001480715.1 4979034 D 399741 CDS YP_001480716.1 157372727 5607445 4979933..4980286 1 NC_009832.1 KEGG: sbo:SBO_3365 hypothetical protein; hypothetical protein 4980286 5607445 Spro_4494 Serratia proteamaculans 568 hypothetical protein YP_001480716.1 4979933 D 399741 CDS YP_001480717.1 157372728 5607446 4980297..4981598 1 NC_009832.1 KEGG: yen:YE1040 putative integral membrane protein; putative integral membrane protein 4981598 5607446 Spro_4495 Serratia proteamaculans 568 putative integral membrane protein YP_001480717.1 4980297 D 399741 CDS YP_001480718.1 157372729 5607447 4981659..4982522 1 NC_009832.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: reh:H16_B1238 acid phosphatase; acid phosphatase 4982522 5607447 Spro_4496 Serratia proteamaculans 568 acid phosphatase YP_001480718.1 4981659 D 399741 CDS YP_001480719.1 157372730 5607453 4982800..4983339 1 NC_009832.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase 1 4983339 gntK 5607453 gntK Serratia proteamaculans 568 gluconate kinase 1 YP_001480719.1 4982800 D 399741 CDS YP_001480720.1 157372731 5607454 4983336..4984673 1 NC_009832.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: plu:plu0498 low-affinity gluconate transporter (gluconate permease) (Gnt-I system); gluconate transporter 4984673 5607454 Spro_4498 Serratia proteamaculans 568 gluconate transporter YP_001480720.1 4983336 D 399741 CDS YP_001480721.1 157372732 5607455 4984783..4986597 1 NC_009832.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 4986597 5607455 Spro_4499 Serratia proteamaculans 568 phosphogluconate dehydratase YP_001480721.1 4984783 D 399741 CDS YP_001480722.1 157372733 5607460 4986654..4987295 1 NC_009832.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 4987295 5607460 Spro_4500 Serratia proteamaculans 568 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001480722.1 4986654 D 399741 CDS YP_001480723.1 157372734 5607461 complement(4987326..4989080) 1 NC_009832.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 4989080 aceK 5607461 aceK Serratia proteamaculans 568 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_001480723.1 4987326 R 399741 CDS YP_001480724.1 157372735 5607462 complement(4989151..4990458) 1 NC_009832.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ypi:YpsIP31758_0295 isocitrate lyase; isocitrate lyase 4990458 5607462 Spro_4502 Serratia proteamaculans 568 isocitrate lyase YP_001480724.1 4989151 R 399741 CDS YP_001480725.1 157372736 5606216 complement(4990506..4992104) 1 NC_009832.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4992104 5606216 Spro_4503 Serratia proteamaculans 568 malate synthase YP_001480725.1 4990506 R 399741 CDS YP_001480726.1 157372737 5606217 complement(4992491..4993420) 1 NC_009832.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 4993420 5606217 Spro_4504 Serratia proteamaculans 568 homoserine O-succinyltransferase YP_001480726.1 4992491 R 399741 CDS YP_001480727.1 157372738 5602678 4999527..5000069 1 NC_009832.1 KEGG: yen:YE3883 putative transferase; putative transferase 5000069 5602678 Spro_4505 Serratia proteamaculans 568 putative transferase YP_001480727.1 4999527 D 399741 CDS YP_001480728.1 157372739 5605842 complement(5000107..5000925) 1 NC_009832.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 5000925 aroE 5605842 aroE Serratia proteamaculans 568 shikimate 5-dehydrogenase YP_001480728.1 5000107 R 399741 CDS YP_001480729.1 157372740 5605843 complement(5000937..5001506) 1 NC_009832.1 RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; putative ribosome maturation factor 5001506 5605843 Spro_4507 Serratia proteamaculans 568 putative ribosome maturation factor YP_001480729.1 5000937 R 399741 CDS YP_001480730.1 157372741 5605844 complement(5001514..5002059) 1 NC_009832.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: kpn:KPN_03684 putative DNA topoisomerase; DNA topoisomerase type IA Zn finger domain-containing protein 5002059 5605844 Spro_4508 Serratia proteamaculans 568 DNA topoisomerase type IA Zn finger domain-containing protein YP_001480730.1 5001514 R 399741 CDS YP_001480731.1 157372742 5607372 complement(5002085..5002558) 1 NC_009832.1 PFAM: protein of unknown function DUF494; KEGG: eca:ECA3997 Smg protein; hypothetical protein 5002558 5607372 Spro_4509 Serratia proteamaculans 568 hypothetical protein YP_001480731.1 5002085 R 399741 CDS YP_001480732.1 157372743 5607373 complement(5002530..5003651) 1 NC_009832.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: yen:YE3888 hypothetical protein; DNA protecting protein DprA 5003651 5607373 Spro_4510 Serratia proteamaculans 568 DNA protecting protein DprA YP_001480732.1 5002530 R 399741 CDS YP_001480733.1 157372744 5607374 5003785..5004294 1 NC_009832.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 5004294 def 5607374 def Serratia proteamaculans 568 peptide deformylase YP_001480733.1 5003785 D 399741 CDS YP_001480734.1 157372745 5603906 5004312..5005256 1 NC_009832.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 5005256 fmt 5603906 fmt Serratia proteamaculans 568 methionyl-tRNA formyltransferase YP_001480734.1 5004312 D 399741 CDS YP_001480735.1 157372746 5603907 5005330..5006619 1 NC_009832.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 5006619 5603907 Spro_4513 Serratia proteamaculans 568 16S rRNA methyltransferase B YP_001480735.1 5005330 D 399741 CDS YP_001480736.1 157372747 5603908 5006697..5008073 1 NC_009832.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 5008073 trkA 5603908 trkA Serratia proteamaculans 568 potassium transporter peripheral membrane component YP_001480736.1 5006697 D 399741 CDS YP_001480737.1 157372748 5606039 5008214..5008630 1 NC_009832.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 5008630 mscL 5606039 mscL Serratia proteamaculans 568 large-conductance mechanosensitive channel YP_001480737.1 5008214 D 399741 CDS YP_001480738.1 157372749 5606040 complement(5008688..5008894) 1 NC_009832.1 PFAM: protein of unknown function DUF331; KEGG: yen:YE3894 hypothetical protein; hypothetical protein 5008894 5606040 Spro_4516 Serratia proteamaculans 568 hypothetical protein YP_001480738.1 5008688 R 399741 CDS YP_001480739.1 157372750 5606041 complement(5008979..5009410) 1 NC_009832.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 5009410 zntR 5606041 zntR Serratia proteamaculans 568 zinc-responsive transcriptional regulator YP_001480739.1 5008979 R 399741 CDS YP_001480740.1 157372751 5606665 complement(5009606..5009995) 1 NC_009832.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 5009995 rplQ 5606665 rplQ Serratia proteamaculans 568 50S ribosomal protein L17 YP_001480740.1 5009606 R 399741 CDS YP_001480741.1 157372752 5606666 complement(5010036..5011025) 1 NC_009832.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 5011025 5606666 Spro_4519 Serratia proteamaculans 568 DNA-directed RNA polymerase subunit alpha YP_001480741.1 5010036 R 399741 CDS YP_001480742.1 157372753 5606667 complement(5011051..5011671) 1 NC_009832.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 5011671 rpsD 5606667 rpsD Serratia proteamaculans 568 30S ribosomal protein S4 YP_001480742.1 5011051 R 399741 CDS YP_001480743.1 157372754 5605304 complement(5011703..5012092) 1 NC_009832.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 5012092 5605304 Spro_4521 Serratia proteamaculans 568 30S ribosomal protein S11 YP_001480743.1 5011703 R 399741 CDS YP_001480744.1 157372755 5605305 complement(5012109..5012465) 1 NC_009832.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 5012465 rpsM 5605305 rpsM Serratia proteamaculans 568 30S ribosomal protein S13 YP_001480744.1 5012109 R 399741 CDS YP_001480745.1 157372756 5602679 complement(5012761..5014092) 1 NC_009832.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 5014092 secY 5602679 secY Serratia proteamaculans 568 preprotein translocase subunit SecY YP_001480745.1 5012761 R 399741 CDS YP_001480746.1 157372757 5607261 complement(5014100..5014534) 1 NC_009832.1 late assembly protein; 50S ribosomal protein L15 5014534 rplO 5607261 rplO Serratia proteamaculans 568 50S ribosomal protein L15 YP_001480746.1 5014100 R 399741 CDS YP_001480747.1 157372758 5607262 complement(5014538..5014717) 1 NC_009832.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 5014717 rpmD 5607262 rpmD Serratia proteamaculans 568 50S ribosomal protein L30 YP_001480747.1 5014538 R 399741 CDS YP_001480748.1 157372759 5607263 complement(5014720..5015223) 1 NC_009832.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 5015223 rpsE 5607263 rpsE Serratia proteamaculans 568 30S ribosomal protein S5 YP_001480748.1 5014720 R 399741 CDS YP_001480749.1 157372760 5607274 complement(5015238..5015591) 1 NC_009832.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 5015591 rplR 5607274 rplR Serratia proteamaculans 568 50S ribosomal protein L18 YP_001480749.1 5015238 R 399741 CDS YP_001480750.1 157372761 5607275 complement(5015601..5016134) 1 NC_009832.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 5016134 rplF 5607275 rplF Serratia proteamaculans 568 50S ribosomal protein L6 YP_001480750.1 5015601 R 399741 CDS YP_001480751.1 157372762 5607276 complement(5016149..5016541) 1 NC_009832.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 5016541 rpsH 5607276 rpsH Serratia proteamaculans 568 30S ribosomal protein S8 YP_001480751.1 5016149 R 399741 CDS YP_001480752.1 157372763 5606648 complement(5016572..5016877) 1 NC_009832.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 5016877 rpsN 5606648 rpsN Serratia proteamaculans 568 30S ribosomal protein S14 YP_001480752.1 5016572 R 399741 CDS YP_001480753.1 157372764 5606649 complement(5016891..5017430) 1 NC_009832.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 5017430 rplE 5606649 rplE Serratia proteamaculans 568 50S ribosomal protein L5 YP_001480753.1 5016891 R 399741 CDS YP_001480754.1 157372765 5606650 complement(5017445..5017759) 1 NC_009832.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 5017759 rplX 5606650 rplX Serratia proteamaculans 568 50S ribosomal protein L24 YP_001480754.1 5017445 R 399741 CDS YP_001480755.1 157372766 5602479 complement(5017770..5018141) 1 NC_009832.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 5018141 rplN 5602479 rplN Serratia proteamaculans 568 50S ribosomal protein L14 YP_001480755.1 5017770 R 399741 CDS YP_001480756.1 157372767 5602480 complement(5018307..5018561) 1 NC_009832.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 5018561 rpsQ 5602480 rpsQ Serratia proteamaculans 568 30S ribosomal protein S17 YP_001480756.1 5018307 R 399741 CDS YP_001480757.1 157372768 5602481 complement(5018562..5018753) 1 NC_009832.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 5018753 5602481 Spro_4536 Serratia proteamaculans 568 50S ribosomal protein L29 YP_001480757.1 5018562 R 399741 CDS YP_001480758.1 157372769 5603538 complement(5018753..5019163) 1 NC_009832.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 5019163 rplP 5603538 rplP Serratia proteamaculans 568 50S ribosomal protein L16 YP_001480758.1 5018753 R 399741 CDS YP_001480759.1 157372770 5603539 complement(5019176..5019874) 1 NC_009832.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 5019874 rpsC 5603539 rpsC Serratia proteamaculans 568 30S ribosomal protein S3 YP_001480759.1 5019176 R 399741 CDS YP_001480760.1 157372771 5603540 complement(5019892..5020224) 1 NC_009832.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 5020224 rplV 5603540 rplV Serratia proteamaculans 568 50S ribosomal protein L22 YP_001480760.1 5019892 R 399741 CDS YP_001480761.1 157372772 5603652 complement(5020239..5020388) 1 NC_009832.1 PFAM: ribosomal protein S19/S15; KEGG: plu:plu4722 30S ribosomal protein S19; 30S ribosomal protein S19/S15 5020388 5603652 Spro_4540 Serratia proteamaculans 568 30S ribosomal protein S19/S15 YP_001480761.1 5020239 R 399741 CDS YP_001480762.1 157372773 5603653 complement(5020532..5021356) 1 NC_009832.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 5021356 rplB 5603653 rplB Serratia proteamaculans 568 50S ribosomal protein L2 YP_001480762.1 5020532 R 399741 CDS YP_001480763.1 157372774 5603654 complement(5021375..5021677) 1 NC_009832.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 5021677 rplW 5603654 rplW Serratia proteamaculans 568 50S ribosomal protein L23 YP_001480763.1 5021375 R 399741 CDS YP_001480764.1 157372775 5603805 complement(5021674..5022279) 1 NC_009832.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 5022279 rplD 5603805 rplD Serratia proteamaculans 568 50S ribosomal protein L4 YP_001480764.1 5021674 R 399741 CDS YP_001480765.1 157372776 5603806 complement(5022290..5022919) 1 NC_009832.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 5022919 rplC 5603806 rplC Serratia proteamaculans 568 50S ribosomal protein L3 YP_001480765.1 5022290 R 399741 CDS YP_001480766.1 157372777 5603807 complement(5022952..5023263) 1 NC_009832.1 PFAM: ribosomal protein S10; KEGG: ypi:YpsIP31758_3916 ribosomal protein S10; 30S ribosomal protein S10 5023263 5603807 Spro_4545 Serratia proteamaculans 568 30S ribosomal protein S10 YP_001480766.1 5022952 R 399741 CDS YP_001480767.1 157372778 5607463 complement(5023670..5024134) 1 NC_009832.1 iron storage protein; bacterioferritin 5024134 5607463 Spro_4546 Serratia proteamaculans 568 bacterioferritin YP_001480767.1 5023670 R 399741 CDS YP_001480768.1 157372779 5607464 complement(5024209..5024379) 1 NC_009832.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: yps:YPTB3701 putative bacterioferritin-associated ferredoxin; BFD/(2Fe-2S)-binding domain-containing protein 5024379 5607464 Spro_4547 Serratia proteamaculans 568 BFD/(2Fe-2S)-binding domain-containing protein YP_001480768.1 5024209 R 399741 CDS YP_001480769.1 157372780 5607465 complement(5024536..5025720) 1 NC_009832.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 5025720 5607465 Spro_4548 Serratia proteamaculans 568 elongation factor Tu YP_001480769.1 5024536 R 399741 CDS YP_001480770.1 157372781 5603197 complement(5025791..5027905) 1 NC_009832.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 5027905 5603197 Spro_4549 Serratia proteamaculans 568 elongation factor G YP_001480770.1 5025791 R 399741 CDS YP_001480771.1 157372782 5603198 complement(5028003..5028473) 1 NC_009832.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 5028473 5603198 Spro_4550 Serratia proteamaculans 568 30S ribosomal protein S7 YP_001480771.1 5028003 R 399741 CDS YP_001480772.1 157372783 5603199 complement(5028570..5028944) 1 NC_009832.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 5028944 rpsL 5603199 rpsL Serratia proteamaculans 568 30S ribosomal protein S12 YP_001480772.1 5028570 R 399741 CDS YP_001480773.1 157372784 5604660 complement(5029087..5029374) 1 NC_009832.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB 5029374 5604660 Spro_4552 Serratia proteamaculans 568 sulfur transfer complex subunit TusB YP_001480773.1 5029087 R 399741 CDS YP_001480774.1 157372785 5604661 complement(5029384..5029743) 1 NC_009832.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 5029743 5604661 Spro_4553 Serratia proteamaculans 568 sulfur relay protein TusC YP_001480774.1 5029384 R 399741 CDS YP_001480775.1 157372786 5604662 complement(5029752..5030141) 1 NC_009832.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 5030141 5604662 Spro_4554 Serratia proteamaculans 568 sulfur transfer complex subunit TusD YP_001480775.1 5029752 R 399741 CDS YP_001480776.1 157372787 5603100 complement(5030141..5030863) 1 NC_009832.1 PFAM: YheO domain protein; KEGG: yen:YE3934 putative DNA-binding protein; YheO domain-containing protein 5030863 5603100 Spro_4555 Serratia proteamaculans 568 YheO domain-containing protein YP_001480776.1 5030141 R 399741 CDS YP_001480777.1 157372788 5603101 complement(5031264..5032097) 1 NC_009832.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 5032097 5603101 Spro_4556 Serratia proteamaculans 568 FKBP-type peptidyl-prolyl cis-trans isomerase YP_001480777.1 5031264 R 399741 CDS YP_001480778.1 157372789 5603102 5032467..5032694 1 NC_009832.1 PFAM: SlyX family protein; KEGG: ype:YPO0194 SlyX protein; SlyX family protein 5032694 5603102 Spro_4557 Serratia proteamaculans 568 SlyX family protein YP_001480778.1 5032467 D 399741 CDS YP_001480779.1 157372790 5605002 complement(5032755..5033357) 1 NC_009832.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 5033357 5605002 Spro_4558 Serratia proteamaculans 568 FKBP-type peptidyl-prolyl cis-trans isomerase YP_001480779.1 5032755 R 399741 CDS YP_001480780.1 157372791 5605003 complement(5033480..5033683) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: yen:YE3939 hypothetical protein; hypothetical protein 5033683 5605003 Spro_4559 Serratia proteamaculans 568 hypothetical protein YP_001480780.1 5033480 R 399741 CDS YP_001480781.1 157372792 5605004 complement(5033698..5035506) 1 NC_009832.1 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 5035506 5605004 Spro_4560 Serratia proteamaculans 568 glutathione-regulated potassium-efflux system protein KefB YP_001480781.1 5033698 R 399741 CDS YP_001480782.1 157372793 5602661 complement(5035509..5036060) 1 NC_009832.1 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 5036060 5602661 Spro_4561 Serratia proteamaculans 568 glutathione-regulated potassium-efflux system ancillary protein KefG YP_001480782.1 5035509 R 399741 CDS YP_001480783.1 157372794 5602662 5036194..5038107 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yen:YE3942 putative ATPase component of an ABC transporter; putative ABC transporter ATP-binding protein 5038107 5602662 Spro_4562 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YP_001480783.1 5036194 D 399741 CDS YP_001480784.1 157372795 5602663 complement(5038104..5038952) 1 NC_009832.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; taurine dioxygenase 5038952 tauD 5602663 tauD Serratia proteamaculans 568 taurine dioxygenase YP_001480784.1 5038104 R 399741 CDS YP_001480785.1 157372796 5606989 complement(5038949..5039788) 1 NC_009832.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ypi:YpsIP31758_3936 taurine ABC transporter, permease protein; taurine transporter subunit 5039788 5606989 Spro_4564 Serratia proteamaculans 568 taurine transporter subunit YP_001480785.1 5038949 R 399741 CDS YP_001480786.1 157372797 5606990 complement(5039785..5040552) 1 NC_009832.1 Part of the ABC transporter complex tauABC involved in taurine import; taurine transporter ATP-binding subunit 5040552 tauB 5606990 tauB Serratia proteamaculans 568 taurine transporter ATP-binding subunit YP_001480786.1 5039785 R 399741 CDS YP_001480787.1 157372798 5606991 complement(5040562..5041557) 1 NC_009832.1 with TauB and TauC is responsible for taurine uptake.; taurine transporter substrate binding subunit 5041557 tauA 5606991 tauA Serratia proteamaculans 568 taurine transporter substrate binding subunit YP_001480787.1 5040562 R 399741 CDS YP_001480788.1 157372799 5607162 complement(5041665..5042786) 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bra:BRADO0445 putative oxidoreductase/dehydrogenase protein; oxidoreductase domain-containing protein 5042786 5607162 Spro_4567 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001480788.1 5041665 R 399741 CDS YP_001480789.1 157372800 5607163 complement(5042783..5043847) 1 NC_009832.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_00539 putative xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 5043847 5607163 Spro_4568 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001480789.1 5042783 R 399741 CDS YP_001480790.1 157372801 5607164 complement(5043844..5044923) 1 NC_009832.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rba:RB3338 probable myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 5044923 5607164 Spro_4569 Serratia proteamaculans 568 oxidoreductase domain-containing protein YP_001480790.1 5043844 R 399741 CDS YP_001480791.1 157372802 5607133 complement(5044916..5046175) 1 NC_009832.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: asu:Asuc_0358 nucleoside:H symporter; nucleoside:H symporter 5046175 5607133 Spro_4570 Serratia proteamaculans 568 nucleoside:H symporter YP_001480791.1 5044916 R 399741 CDS YP_001480792.1 157372803 5607134 complement(5046207..5046740) 1 NC_009832.1 hypothetical protein 5046740 5607134 Spro_4571 Serratia proteamaculans 568 hypothetical protein YP_001480792.1 5046207 R 399741 CDS YP_001480793.1 157372804 5607135 complement(5046801..5047124) 1 NC_009832.1 hypothetical protein 5047124 5607135 Spro_4572 Serratia proteamaculans 568 hypothetical protein YP_001480793.1 5046801 R 399741 CDS YP_001480794.1 157372805 5607277 5047368..5048348 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eca:ECA1397 LacI-family transcriptional regulator; LacI family transcription regulator 5048348 5607277 Spro_4573 Serratia proteamaculans 568 LacI family transcription regulator YP_001480794.1 5047368 D 399741 CDS YP_001480795.1 157372806 5607278 complement(5048349..5049131) 1 NC_009832.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: yen:YE3949 hypothetical protein; PhzF family phenazine biosynthesis protein 5049131 5607278 Spro_4574 Serratia proteamaculans 568 PhzF family phenazine biosynthesis protein YP_001480795.1 5048349 R 399741 CDS YP_001480796.1 157372807 5607279 complement(5049142..5049744) 1 NC_009832.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: eca:ECA4059 hypothetical protein; lysine exporter protein LysE/YggA 5049744 5607279 Spro_4575 Serratia proteamaculans 568 lysine exporter protein LysE/YggA YP_001480796.1 5049142 R 399741 CDS YP_001480797.1 157372808 5605708 5049863..5050843 1 NC_009832.1 PFAM: alpha/beta hydrolase fold; KEGG: yen:YE3951 hypothetical protein; putative hydrolase 5050843 5605708 Spro_4576 Serratia proteamaculans 568 putative hydrolase YP_001480797.1 5049863 D 399741 CDS YP_001480798.1 157372809 5605709 5050840..5051073 1 NC_009832.1 PFAM: protein of unknown function UPF0270; KEGG: yen:YE3952 hypothetical protein; hypothetical protein 5051073 5605709 Spro_4577 Serratia proteamaculans 568 hypothetical protein YP_001480798.1 5050840 D 399741 CDS YP_001480799.1 157372810 5605710 5051225..5052094 1 NC_009832.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: yen:YE3953 phosphoribulokinase 1; phosphoribulokinase 5052094 5605710 Spro_4578 Serratia proteamaculans 568 phosphoribulokinase YP_001480799.1 5051225 D 399741 CDS YP_001480800.1 157372811 5605278 complement(5052134..5052541) 1 NC_009832.1 PFAM: OsmC family protein; KEGG: ypi:YpsIP31758_3944 OsmC family protein; hypothetical protein 5052541 5605278 Spro_4579 Serratia proteamaculans 568 hypothetical protein YP_001480800.1 5052134 R 399741 CDS YP_001480801.1 157372812 5605279 5052921..5053553 1 NC_009832.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 5053553 5605279 Spro_4580 Serratia proteamaculans 568 cAMP-regulatory protein YP_001480801.1 5052921 D 399741 CDS YP_001480802.1 157372813 5605280 5053593..5055683 1 NC_009832.1 TIGRFAM: integral membrane protein, YccS/YhfK family; PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: ent:Ent638_3785 integral membrane protein, YccS/YhfK family; YccS/YhfK family integral membrane protein 5055683 5605280 Spro_4581 Serratia proteamaculans 568 YccS/YhfK family integral membrane protein YP_001480802.1 5053593 D 399741 CDS YP_001480803.1 157372814 5604375 complement(5055721..5056938) 1 NC_009832.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 5056938 argD 5604375 argD Serratia proteamaculans 568 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_001480803.1 5055721 R 399741 CDS YP_001480804.1 157372815 5604376 complement(5057070..5057645) 1 NC_009832.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 5057645 5604376 Spro_4583 Serratia proteamaculans 568 para-aminobenzoate synthase component II YP_001480804.1 5057070 R 399741 CDS YP_001480805.1 157372816 5604377 complement(5057744..5059270) 1 NC_009832.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: ypi:YpsIP31758_3949 hypothetical protein; hypothetical protein 5059270 5604377 Spro_4584 Serratia proteamaculans 568 hypothetical protein YP_001480805.1 5057744 R 399741 CDS YP_001480806.1 157372817 5603930 5059501..5059770 1 NC_009832.1 KEGG: pmy:Pmen_3761 hypothetical protein; hypothetical protein 5059770 5603930 Spro_4585 Serratia proteamaculans 568 hypothetical protein YP_001480806.1 5059501 D 399741 CDS YP_001480807.1 157372818 5603931 5059788..5060072 1 NC_009832.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: neu:NE0552 hypothetical protein; addiction module antitoxin 5060072 5603931 Spro_4586 Serratia proteamaculans 568 addiction module antitoxin YP_001480807.1 5059788 D 399741 CDS YP_001480808.1 157372819 5603932 complement(5060073..5060798) 1 NC_009832.1 unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT 5060798 5603932 Spro_4587 Serratia proteamaculans 568 putative two-component response-regulatory protein YehT YP_001480808.1 5060073 R 399741 CDS YP_001480809.1 157372820 5607255 complement(5060798..5062483) 1 NC_009832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: GAF domain protein; KEGG: ecv:APECO1_4423 putative sensory kinase in two-component system with YehT; signal transduction histidine kinase LytS 5062483 5607255 Spro_4588 Serratia proteamaculans 568 signal transduction histidine kinase LytS YP_001480809.1 5060798 R 399741 CDS YP_001480810.1 157372821 5607256 complement(5062645..5063214) 1 NC_009832.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: yen:YE3960 peptidyl-prolyl cis-trans isomerase A; peptidyl-prolyl cis-trans isomerase A 5063214 5607256 Spro_4589 Serratia proteamaculans 568 peptidyl-prolyl cis-trans isomerase A YP_001480810.1 5062645 R 399741 CDS YP_001480811.1 157372822 5607257 5063569..5063913 1 NC_009832.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: plu:plu2756 PTS system, cellobiose-specific IIA component (EIIA-CEL) (cellobiose-permease IIA component) (phosphotransferase enzyme II, A component) (EIII-CEL); PTS system lactose/cellobiose-specific transporter subunit IIA 5063913 5607257 Spro_4590 Serratia proteamaculans 568 PTS system lactose/cellobiose-specific transporter subunit IIA YP_001480811.1 5063569 D 399741 CDS YP_001480812.1 157372823 5607099 5063910..5065217 1 NC_009832.1 PFAM: glycoside hydrolase family 4; KEGG: ypi:YpsIP31758_3951 6-phospho-beta-glucosidase; glycoside hydrolase family protein 5065217 5607099 Spro_4591 Serratia proteamaculans 568 glycoside hydrolase family protein YP_001480812.1 5063910 D 399741 CDS YP_001480813.1 157372824 5607100 5065310..5066293 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ypi:YpsIP31758_3952 sugar-binding transcriptional regulator, LacI family; LacI family transcription regulator 5066293 5607100 Spro_4592 Serratia proteamaculans 568 LacI family transcription regulator YP_001480813.1 5065310 D 399741 CDS YP_001480814.1 157372825 5607101 5066484..5067668 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3963 conserved integral membrane protein; hypothetical protein 5067668 5607101 Spro_4593 Serratia proteamaculans 568 hypothetical protein YP_001480814.1 5066484 D 399741 CDS YP_001480815.1 157372826 5607047 complement(5067736..5069004) 1 NC_009832.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 5069004 5607047 Spro_4594 Serratia proteamaculans 568 cytosine deaminase YP_001480815.1 5067736 R 399741 CDS YP_001480816.1 157372827 5607048 5069309..5071858 1 NC_009832.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: yen:YE3965 nitrite reductase; nitrite reductase (NAD(P)H), large subunit 5071858 5607048 Spro_4595 Serratia proteamaculans 568 nitrite reductase (NAD(P)H), large subunit YP_001480816.1 5069309 D 399741 CDS YP_001480817.1 157372828 5607049 5071855..5072181 1 NC_009832.1 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 5072181 nirD 5607049 nirD Serratia proteamaculans 568 nitrite reductase small subunit YP_001480817.1 5071855 D 399741 CDS YP_001480818.1 157372829 5606866 5072211..5073011 1 NC_009832.1 member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 5073011 5606866 Spro_4597 Serratia proteamaculans 568 nitrite transporter NirC YP_001480818.1 5072211 D 399741 CDS YP_001480819.1 157372830 5606867 5073061..5074464 1 NC_009832.1 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 5074464 cysG 5606867 cysG Serratia proteamaculans 568 siroheme synthase YP_001480819.1 5073061 D 399741 CDS YP_001480820.1 157372831 5606868 complement(5074516..5075520) 1 NC_009832.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 5075520 5606868 Spro_4599 Serratia proteamaculans 568 tryptophanyl-tRNA synthetase YP_001480820.1 5074516 R 399741 CDS YP_001480821.1 157372832 5606124 complement(5075523..5076221) 1 NC_009832.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 5076221 5606124 Spro_4600 Serratia proteamaculans 568 phosphoglycolate phosphatase YP_001480821.1 5075523 R 399741 CDS YP_001480822.1 157372833 5606125 complement(5076214..5076891) 1 NC_009832.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: stm:STM3483 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 5076891 5606125 Spro_4601 Serratia proteamaculans 568 ribulose-phosphate 3-epimerase YP_001480822.1 5076214 R 399741 CDS YP_001480823.1 157372834 5606126 complement(5076955..5077767) 1 NC_009832.1 KEGG: yen:YE3972 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 5077767 5606126 Spro_4602 Serratia proteamaculans 568 DNA adenine methylase YP_001480823.1 5076955 R 399741 CDS YP_001480824.1 157372835 5605907 complement(5078023..5079045) 1 NC_009832.1 PFAM: Sporulation domain protein; KEGG: yen:YE3973 hypothetical protein; hypothetical protein 5079045 5605907 Spro_4603 Serratia proteamaculans 568 hypothetical protein YP_001480824.1 5078023 R 399741 CDS YP_001480825.1 157372836 5605908 complement(5079201..5080301) 1 NC_009832.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 5080301 aroB 5605908 aroB Serratia proteamaculans 568 3-dehydroquinate synthase YP_001480825.1 5079201 R 399741 CDS YP_001480826.1 157372837 5605909 complement(5080393..5080914) 1 NC_009832.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 5080914 aroK 5605909 aroK Serratia proteamaculans 568 shikimate kinase I YP_001480826.1 5080393 R 399741 CDS YP_001480827.1 157372838 5605450 complement(5081265..5082506) 1 NC_009832.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; putative outer membrane porin HofQ 5082506 hofQ 5605450 hofQ Serratia proteamaculans 568 putative outer membrane porin HofQ YP_001480827.1 5081265 R 399741 CDS YP_001480828.1 157372839 5605451 complement(5082503..5082865) 1 NC_009832.1 KEGG: eca:ECA4095 hypothetical protein; hypothetical protein 5082865 5605451 Spro_4607 Serratia proteamaculans 568 hypothetical protein YP_001480828.1 5082503 R 399741 CDS YP_001480829.1 157372840 5605452 complement(5082858..5083379) 1 NC_009832.1 hypothetical protein 5083379 5605452 Spro_4608 Serratia proteamaculans 568 hypothetical protein YP_001480829.1 5082858 R 399741 CDS YP_001480830.1 157372841 5605157 complement(5083372..5083908) 1 NC_009832.1 PFAM: Fimbrial assembly family protein; KEGG: ypp:YPDSF_0073 membrane protein; fimbrial assembly family protein 5083908 5605157 Spro_4609 Serratia proteamaculans 568 fimbrial assembly family protein YP_001480830.1 5083372 R 399741 CDS YP_001480831.1 157372842 5605158 complement(5083908..5084750) 1 NC_009832.1 KEGG: yps:YPTB3755 hypothetical protein; hypothetical protein 5084750 5605158 Spro_4610 Serratia proteamaculans 568 hypothetical protein YP_001480831.1 5083908 R 399741 CDS YP_001480832.1 157372843 5605159 5084873..5087431 1 NC_009832.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 5087431 mrcA 5605159 mrcA Serratia proteamaculans 568 peptidoglycan synthetase YP_001480832.1 5084873 D 399741 CDS YP_001480833.1 157372844 5605145 complement(5087483..5088037) 1 NC_009832.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 5088037 nudE 5605145 nudE Serratia proteamaculans 568 ADP-ribose diphosphatase NudE YP_001480833.1 5087483 R 399741 CDS YP_001480834.1 157372845 5605146 5088503..5090635 1 NC_009832.1 PFAM: Intracellular growth attenuator IgaA; KEGG: yen:YE3982 hypothetical protein; intracellular growth attenuator IgaA 5090635 5605146 Spro_4613 Serratia proteamaculans 568 intracellular growth attenuator IgaA YP_001480834.1 5088503 D 399741 CDS YP_001480835.1 157372846 5605147 5090734..5091411 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE3983 hypothetical protein; HAD family hydrolase 5091411 5605147 Spro_4614 Serratia proteamaculans 568 HAD family hydrolase YP_001480835.1 5090734 D 399741 CDS YP_001480836.1 157372847 5604729 5091411..5091818 1 NC_009832.1 PFAM: RNA-binding S4 domain protein; KEGG: yen:YE3984 heat shock protein 15; RNA-binding S4 domain-containing protein 5091818 5604729 Spro_4615 Serratia proteamaculans 568 RNA-binding S4 domain-containing protein YP_001480836.1 5091411 D 399741 CDS YP_001480837.1 157372848 5604730 5091844..5092722 1 NC_009832.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 5092722 hslO 5604730 hslO Serratia proteamaculans 568 Hsp33-like chaperonin YP_001480837.1 5091844 D 399741 CDS YP_001480838.1 157372849 5604731 5092919..5094538 1 NC_009832.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 5094538 5604731 Spro_4617 Serratia proteamaculans 568 phosphoenolpyruvate carboxykinase YP_001480838.1 5092919 D 399741 CDS YP_001480839.1 157372850 5604510 5094664..5094927 1 NC_009832.1 KEGG: pmy:Pmen_1046 hypothetical protein; hypothetical protein 5094927 5604510 Spro_4618 Serratia proteamaculans 568 hypothetical protein YP_001480839.1 5094664 D 399741 CDS YP_001480840.1 157372851 5604511 5094924..5095403 1 NC_009832.1 PFAM: PilT protein domain protein; KEGG: csa:Csal_1070 PilT protein-like protein; PilT domain-containing protein 5095403 5604511 Spro_4619 Serratia proteamaculans 568 PilT domain-containing protein YP_001480840.1 5094924 D 399741 CDS YP_001480841.1 157372852 5604512 complement(5095420..5096799) 1 NC_009832.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 5096799 envZ 5604512 envZ Serratia proteamaculans 568 osmolarity sensor protein YP_001480841.1 5095420 R 399741 CDS YP_001480842.1 157372853 5604657 complement(5096796..5097515) 1 NC_009832.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 5097515 ompR 5604657 ompR Serratia proteamaculans 568 osmolarity response regulator YP_001480842.1 5096796 R 399741 CDS YP_001480843.1 157372854 5604658 complement(5097847..5098791) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2243 probable transcription regulator protein; LysR family transcriptional regulator 5098791 5604658 Spro_4622 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480843.1 5097847 R 399741 CDS YP_001480844.1 157372855 5604659 5098905..5100395 1 NC_009832.1 PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_B3062 aldehyde dehydrogenase; aldehyde dehydrogenase 5100395 5604659 Spro_4623 Serratia proteamaculans 568 aldehyde dehydrogenase YP_001480844.1 5098905 D 399741 CDS YP_001480845.1 157372856 5603959 5100396..5101430 1 NC_009832.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: swi:Swit_3059 gentisate 1,2-dioxygenase; cupin 2 domain-containing protein 5101430 5603959 Spro_4624 Serratia proteamaculans 568 cupin 2 domain-containing protein YP_001480845.1 5100396 D 399741 CDS YP_001480846.1 157372857 5603960 5101500..5102363 1 NC_009832.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_2474 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 5102363 5603960 Spro_4625 Serratia proteamaculans 568 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001480846.1 5101500 D 399741 CDS YP_001480847.1 157372858 5603961 5102449..5102922 1 NC_009832.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 5102922 greB 5603961 greB Serratia proteamaculans 568 transcription elongation factor GreB YP_001480847.1 5102449 D 399741 CDS YP_001480848.1 157372859 5604451 5103204..5105537 1 NC_009832.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: yen:YE4000 putative transcription accessory protein; RNA-binding S1 domain-containing protein 5105537 5604451 Spro_4627 Serratia proteamaculans 568 RNA-binding S1 domain-containing protein YP_001480848.1 5103204 D 399741 CDS YP_001480849.1 157372860 5604452 5106180..5106404 1 NC_009832.1 PFAM: FeoA family protein; KEGG: yen:YE3999 hypothetical ferrous iron transport protein A; ferrous iron transport protein A 5106404 feoA 5604452 feoA Serratia proteamaculans 568 ferrous iron transport protein A YP_001480849.1 5106180 D 399741 CDS YP_001480850.1 157372861 5604453 5106476..5108791 1 NC_009832.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 5108791 feoB 5604453 feoB Serratia proteamaculans 568 ferrous iron transport protein B YP_001480850.1 5106476 D 399741 CDS YP_001480851.1 157372862 5604260 5108791..5109030 1 NC_009832.1 PFAM: Protein of unknown function DUF1920; KEGG: yen:YE3997 ferrous iron transport protein C; hypothetical protein 5109030 5604260 Spro_4630 Serratia proteamaculans 568 hypothetical protein YP_001480851.1 5108791 D 399741 CDS YP_001480852.1 157372863 5604261 complement(5109085..5109366) 1 NC_009832.1 PFAM: protein of unknown function DUF1471; KEGG: ypi:YpsIP31758_3987 hypothetical protein; hypothetical protein 5109366 5604261 Spro_4631 Serratia proteamaculans 568 hypothetical protein YP_001480852.1 5109085 R 399741 CDS YP_001480853.1 157372864 5604262 complement(5109611..5110405) 1 NC_009832.1 TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: eca:ECA4132 putative biotin biosynthesis protein; bioH protein 5110405 5604262 Spro_4632 Serratia proteamaculans 568 bioH protein YP_001480853.1 5109611 R 399741 CDS YP_001480854.1 157372865 5604044 5110448..5111131 1 NC_009832.1 involved in high-affinity gluconate transport; gluconate periplasmic binding protein 5111131 5604044 Spro_4633 Serratia proteamaculans 568 gluconate periplasmic binding protein YP_001480854.1 5110448 D 399741 CDS YP_001480855.1 157372866 5604045 5111199..5111774 1 NC_009832.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 5111774 5604045 Spro_4634 Serratia proteamaculans 568 putative DNA uptake protein YP_001480855.1 5111199 D 399741 CDS YP_001480856.1 157372867 5604046 complement(5111857..5113947) 1 NC_009832.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 5113947 malQ 5604046 malQ Serratia proteamaculans 568 4-alpha-glucanotransferase YP_001480856.1 5111857 R 399741 CDS YP_001480857.1 157372868 5607130 complement(5113957..5116362) 1 NC_009832.1 KEGG: yen:YE3991 phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 5116362 5607130 Spro_4636 Serratia proteamaculans 568 glycogen/starch/alpha-glucan phosphorylase YP_001480857.1 5113957 R 399741 CDS YP_001480858.1 157372869 5607131 5116907..5119621 1 NC_009832.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 5119621 5607131 Spro_4637 Serratia proteamaculans 568 transcriptional regulator MalT YP_001480858.1 5116907 D 399741 CDS YP_001480859.1 157372870 5607132 5120247..5120573 1 NC_009832.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase 5120573 glpE 5607132 glpE Serratia proteamaculans 568 thiosulfate sulfurtransferase YP_001480859.1 5120247 D 399741 CDS YP_001480860.1 157372871 5603059 5120740..5121576 1 NC_009832.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 5121576 5603059 Spro_4639 Serratia proteamaculans 568 intramembrane serine protease GlpG YP_001480860.1 5120740 D 399741 CDS YP_001480861.1 157372872 5603060 5121613..5122371 1 NC_009832.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 5122371 5603060 Spro_4640 Serratia proteamaculans 568 DNA-binding transcriptional repressor GlpR YP_001480861.1 5121613 D 399741 CDS YP_001480862.1 157372873 5603061 complement(5122408..5123409) 1 NC_009832.1 KEGG: dvu:DVU1708 hypothetical protein; hypothetical protein 5123409 5603061 Spro_4641 Serratia proteamaculans 568 hypothetical protein YP_001480862.1 5122408 R 399741 CDS YP_001480863.1 157372874 5603091 5123795..5125303 1 NC_009832.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 5125303 glpD 5603091 glpD Serratia proteamaculans 568 glycerol-3-phosphate dehydrogenase YP_001480863.1 5123795 D 399741 CDS YP_001480864.1 157372875 5603092 complement(5125347..5127794) 1 NC_009832.1 KEGG: ypp:YPDSF_3303 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 5127794 5603092 Spro_4643 Serratia proteamaculans 568 glycogen/starch/alpha-glucan phosphorylase YP_001480864.1 5125347 R 399741 CDS YP_001480865.1 157372876 5603093 complement(5127886..5129319) 1 NC_009832.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 5129319 glgA 5603093 glgA Serratia proteamaculans 568 glycogen synthase YP_001480865.1 5127886 R 399741 CDS YP_001480866.1 157372877 5603139 complement(5129460..5130737) 1 NC_009832.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 5130737 glgC 5603139 glgC Serratia proteamaculans 568 glucose-1-phosphate adenylyltransferase YP_001480866.1 5129460 R 399741 CDS YP_001480867.1 157372878 5603140 complement(5130750..5132735) 1 NC_009832.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein 5132735 5603140 Spro_4646 Serratia proteamaculans 568 glycogen debranching protein YP_001480867.1 5130750 R 399741 CDS YP_001480868.1 157372879 5603141 complement(5132732..5134918) 1 NC_009832.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 5134918 5603141 Spro_4647 Serratia proteamaculans 568 glycogen branching enzyme YP_001480868.1 5132732 R 399741 CDS YP_001480869.1 157372880 5603069 complement(5135417..5136520) 1 NC_009832.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 5136520 5603069 Spro_4648 Serratia proteamaculans 568 aspartate-semialdehyde dehydrogenase YP_001480869.1 5135417 R 399741 CDS YP_001480870.1 157372881 5603070 5136759..5137352 1 NC_009832.1 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); putative dITP- and XTP- hydrolase 5137352 5603070 Spro_4649 Serratia proteamaculans 568 putative dITP- and XTP- hydrolase YP_001480870.1 5136759 D 399741 CDS YP_001480871.1 157372882 5603071 complement(5137401..5137928) 1 NC_009832.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase 1 5137928 gntK 5603071 gntK Serratia proteamaculans 568 gluconate kinase 1 YP_001480871.1 5137401 R 399741 CDS YP_001480872.1 157372883 5602617 complement(5138033..5139349) 1 NC_009832.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: ypp:YPDSF_3319 gluconate permease; gluconate transporter 5139349 5602617 Spro_4651 Serratia proteamaculans 568 gluconate transporter YP_001480872.1 5138033 R 399741 CDS YP_001480873.1 157372884 5602618 complement(5139679..5140710) 1 NC_009832.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: yps:YPTB3798 gluconate utilization system Gnt-I transcriptional repressor; LacI family transcription regulator 5140710 5602618 Spro_4652 Serratia proteamaculans 568 LacI family transcription regulator YP_001480873.1 5139679 R 399741 CDS YP_001480874.1 157372885 5602619 complement(5140806..5141501) 1 NC_009832.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: ypi:YpsIP31758_4023 YhhW family protein; pirin domain-containing protein 5141501 5602619 Spro_4653 Serratia proteamaculans 568 pirin domain-containing protein YP_001480874.1 5140806 R 399741 CDS YP_001480875.1 157372886 5603056 5141889..5142407 1 NC_009832.1 PFAM: GCN5-related N-acetyltransferase; KEGG: yen:YE4024 hypothetical protein; GCN5-like N-acetyltransferase 5142407 5603056 Spro_4654 Serratia proteamaculans 568 GCN5-like N-acetyltransferase YP_001480875.1 5141889 D 399741 CDS YP_001480876.1 157372887 5603057 5142539..5143582 1 NC_009832.1 PFAM: peptidase S58 DmpA; KEGG: hne:HNE_3147 peptidase, T4 family; peptidase S58 DmpA 5143582 5603057 Spro_4655 Serratia proteamaculans 568 peptidase S58 DmpA YP_001480876.1 5142539 D 399741 CDS YP_001480877.1 157372888 5603058 complement(5143643..5144539) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: yen:YE4025 hypothetical protein; xylose isomerase domain-containing protein 5144539 5603058 Spro_4656 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001480877.1 5143643 R 399741 CDS YP_001480878.1 157372889 5602909 complement(5144599..5145483) 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: kpn:KPN_04676 putative epimerase/isomerase; xylose isomerase domain-containing protein 5145483 5602909 Spro_4657 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001480878.1 5144599 R 399741 CDS YP_001480879.1 157372890 5602910 complement(5145523..5146536) 1 NC_009832.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: yen:YE4026 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase 5146536 5602910 Spro_4658 Serratia proteamaculans 568 inositol 2-dehydrogenase YP_001480879.1 5145523 R 399741 CDS YP_001480880.1 157372891 5602911 complement(5146601..5148541) 1 NC_009832.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: yen:YE4027 putative thiamine pyrophosphate-dependent protein; thiamine pyrophosphate protein central region 5148541 5602911 Spro_4659 Serratia proteamaculans 568 thiamine pyrophosphate protein central region YP_001480880.1 5146601 R 399741 CDS YP_001480881.1 157372892 5603142 5149076..5151004 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: yen:YE4028 putative carbohydrate kinase; ribokinase-like domain-containing protein 5151004 5603142 Spro_4660 Serratia proteamaculans 568 ribokinase-like domain-containing protein YP_001480881.1 5149076 D 399741 CDS YP_001480882.1 157372893 5603143 5151202..5152038 1 NC_009832.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: yen:YE4029 hypothetical protein; RpiR family transcriptional regulator 5152038 5603143 Spro_4661 Serratia proteamaculans 568 RpiR family transcriptional regulator YP_001480882.1 5151202 D 399741 CDS YP_001480883.1 157372894 5603144 complement(5152156..5152977) 1 NC_009832.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: yen:YE4030 hypothetical protein; myo-inositol catabolism IolB domain-containing protein 5152977 5603144 Spro_4662 Serratia proteamaculans 568 myo-inositol catabolism IolB domain-containing protein YP_001480883.1 5152156 R 399741 CDS YP_001480884.1 157372895 5602990 complement(5153063..5154568) 1 NC_009832.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: yen:YE4031 putative aldehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 5154568 5602990 Spro_4663 Serratia proteamaculans 568 methylmalonate-semialdehyde dehydrogenase YP_001480884.1 5153063 R 399741 CDS YP_001480885.1 157372896 5602991 5155132..5156559 1 NC_009832.1 KEGG: stm:STM4418 sugar transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 5156559 5602991 Spro_4664 Serratia proteamaculans 568 sugar transporter YP_001480885.1 5155132 D 399741 CDS YP_001480886.1 157372897 5602992 5156606..5157442 1 NC_009832.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: stm:STM4435 putative cytoplasmic protein; xylose isomerase domain-containing protein 5157442 5602992 Spro_4665 Serratia proteamaculans 568 xylose isomerase domain-containing protein YP_001480886.1 5156606 D 399741 CDS YP_001480887.1 157372898 5605549 complement(5157673..5158446) 1 NC_009832.1 PFAM: conserved hypothetical protein; KEGG: stm:STM0503 putative YbbM family transport protein, metal resistance protein; hypothetical protein 5158446 5605549 Spro_4666 Serratia proteamaculans 568 hypothetical protein YP_001480887.1 5157673 R 399741 CDS YP_001480888.1 157372899 5605550 complement(5158433..5159110) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kpn:KPN_00468 putative ATP-binding component of a transport system; putative ABC transporter ATP-binding protein YbbL 5159110 5605550 Spro_4667 Serratia proteamaculans 568 putative ABC transporter ATP-binding protein YbbL YP_001480888.1 5158433 R 399741 CDS YP_001480889.1 157372900 5605551 complement(5159294..5159506) 1 NC_009832.1 KEGG: plu:plu3508 hypothetical protein; hypothetical protein 5159506 5605551 Spro_4668 Serratia proteamaculans 568 hypothetical protein YP_001480889.1 5159294 R 399741 CDS YP_001480890.1 157372901 5603602 complement(5159591..5160739) 1 NC_009832.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: ent:Ent638_0982 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 5160739 5603602 Spro_4669 Serratia proteamaculans 568 FKBP-type peptidylprolyl isomerase YP_001480890.1 5159591 R 399741 CDS YP_001480891.1 157372902 5603603 complement(5160742..5161155) 1 NC_009832.1 KEGG: kpn:KPN_00129 hypothetical protein; hypothetical protein 5161155 5603603 Spro_4670 Serratia proteamaculans 568 hypothetical protein YP_001480891.1 5160742 R 399741 CDS YP_001480892.1 157372903 5603604 5161918..5162448 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: yps:YPTB3364 putative mannose-resistant Proteus-like fimbrial protein; fimbrial protein 5162448 5603604 Spro_4671 Serratia proteamaculans 568 fimbrial protein YP_001480892.1 5161918 D 399741 CDS YP_001480893.1 157372904 5606801 5162536..5163087 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: aha:AHA_0519 fimbrial protein; fimbrial protein 5163087 5606801 Spro_4672 Serratia proteamaculans 568 fimbrial protein YP_001480893.1 5162536 D 399741 CDS YP_001480894.1 157372905 5606802 5163201..5165687 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: aha:AHA_0521 outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 5165687 5606802 Spro_4673 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001480894.1 5163201 D 399741 CDS YP_001480895.1 157372906 5606803 5165710..5166462 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: ypi:YpsIP31758_0615 chaperone protein PapD; pili assembly chaperone 5166462 5606803 Spro_4674 Serratia proteamaculans 568 pili assembly chaperone YP_001480895.1 5165710 D 399741 CDS YP_001480896.1 157372907 5607219 5166474..5167088 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0769 MrfA protein; fimbrial protein 5167088 5607219 Spro_4675 Serratia proteamaculans 568 fimbrial protein YP_001480896.1 5166474 D 399741 CDS YP_001480897.1 157372908 5607220 5167103..5168107 1 NC_009832.1 KEGG: asa:ASA_3729 type I pilus assembly protein FimE; type I pilus assembly protein FimE 5168107 5607220 Spro_4676 Serratia proteamaculans 568 type I pilus assembly protein FimE YP_001480897.1 5167103 D 399741 CDS YP_001480898.1 157372909 5607221 5168126..5168665 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: asa:ASA_3730 type I pilus assembly protein FimF; fimbrial protein 5168665 5607221 Spro_4677 Serratia proteamaculans 568 fimbrial protein YP_001480898.1 5168126 D 399741 CDS YP_001480899.1 157372910 5606520 5168690..5170324 1 NC_009832.1 PFAM: O-antigen polymerase; KEGG: asa:ASA_1459 lipid A core - O-antigen ligase; O-antigen polymerase 5170324 5606520 Spro_4678 Serratia proteamaculans 568 O-antigen polymerase YP_001480899.1 5168690 D 399741 CDS YP_001480900.1 157372911 5606521 5170327..5170938 1 NC_009832.1 PFAM: regulatory protein LuxR; KEGG: stt:t2311 fimbriae w protein; LuxR family transcriptional regulator 5170938 5606521 Spro_4679 Serratia proteamaculans 568 LuxR family transcriptional regulator YP_001480900.1 5170327 D 399741 CDS YP_001480901.1 157372912 5606522 complement(5170930..5171856) 1 NC_009832.1 KEGG: pen:PSEEN1860 hypothetical protein; hypothetical protein 5171856 5606522 Spro_4680 Serratia proteamaculans 568 hypothetical protein YP_001480901.1 5170930 R 399741 CDS YP_001480902.1 157372913 5606502 5172000..5172422 1 NC_009832.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: aci:ACIAD1283 putative transcription regulator (AsnC family); AsnC family transcriptional regulator 5172422 5606502 Spro_4681 Serratia proteamaculans 568 AsnC family transcriptional regulator YP_001480902.1 5172000 D 399741 CDS YP_001480903.1 157372914 5606503 complement(5172528..5173289) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fjo:Fjoh_3994 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5173289 5606503 Spro_4682 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480903.1 5172528 R 399741 CDS YP_001480904.1 157372915 5606504 complement(5173423..5174208) 1 NC_009832.1 hypothetical protein 5174208 5606504 Spro_4683 Serratia proteamaculans 568 hypothetical protein YP_001480904.1 5173423 R 399741 CDS YP_001480905.1 157372916 5606017 5174273..5175244 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mms:mma_2322 transcriptional regulator, LysR family; LysR family transcriptional regulator 5175244 5606017 Spro_4684 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480905.1 5174273 D 399741 CDS YP_001480906.1 157372917 5606018 complement(5175357..5177120) 1 NC_009832.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family; NADH:flavin oxidoreductase/NADH oxidase 5177120 5606018 Spro_4685 Serratia proteamaculans 568 NADH:flavin oxidoreductase/NADH oxidase YP_001480906.1 5175357 R 399741 CDS YP_001480907.1 157372918 5606019 complement(5177583..5178029) 1 NC_009832.1 KEGG: pap:PSPA7_4413 hypothetical protein; hypothetical protein 5178029 5606019 Spro_4686 Serratia proteamaculans 568 hypothetical protein YP_001480907.1 5177583 R 399741 CDS YP_001480908.1 157372919 5606377 5178365..5179228 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I2369 transcriptional regulator, AraC family domain protein; AraC family transcriptional regulator 5179228 5606377 Spro_4687 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001480908.1 5178365 D 399741 CDS YP_001480909.1 157372920 5606378 complement(5179233..5180474) 1 NC_009832.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ypn:YPN_3615 hypothetical protein; hypothetical protein 5180474 5606378 Spro_4688 Serratia proteamaculans 568 hypothetical protein YP_001480909.1 5179233 R 399741 CDS YP_001480910.1 157372921 5606379 5180729..5182231 1 NC_009832.1 PFAM: phosphate transporter; KEGG: yen:YE4048 phosphate transport protein; phosphate transporter 5182231 5606379 Spro_4689 Serratia proteamaculans 568 phosphate transporter YP_001480910.1 5180729 D 399741 CDS YP_001480911.1 157372922 5607096 complement(5182306..5182689) 1 NC_009832.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 5182689 5607096 Spro_4690 Serratia proteamaculans 568 universal stress protein UspB YP_001480911.1 5182306 R 399741 CDS YP_001480912.1 157372923 5607097 5183252..5183698 1 NC_009832.1 PFAM: UspA domain protein; KEGG: sdy:SDY_3567 universal stress protein; broad regulatory function?; UspA domain-containing protein 5183698 5607097 Spro_4691 Serratia proteamaculans 568 UspA domain-containing protein YP_001480912.1 5183252 D 399741 CDS YP_001480913.1 157372924 5607098 5183895..5185229 1 NC_009832.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 5185229 5607098 Spro_4692 Serratia proteamaculans 568 glutamate dehydrogenase YP_001480913.1 5183895 D 399741 CDS YP_001480914.1 157372925 5607395 5185569..5186555 1 NC_009832.1 KEGG: ypi:YpsIP31758_0364 carbohydrate uptake (CUT2 family) ABC transporter, periplasmic carbohydrate-binding protein; carbohydrate ABC transporter periplasmic-binding protein 5186555 5607395 Spro_4693 Serratia proteamaculans 568 carbohydrate ABC transporter periplasmic-binding protein YP_001480914.1 5185569 D 399741 CDS YP_001480915.1 157372926 5607396 5186656..5188155 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypi:YpsIP31758_0365 carbohydrate uptake (CUT2 family) ABC transporter, ATP-binding protein; ABC transporter-like protein 5188155 5607396 Spro_4694 Serratia proteamaculans 568 ABC transporter-like protein YP_001480915.1 5186656 D 399741 CDS YP_001480916.1 157372927 5607397 5188148..5189137 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0366 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; monosaccharide-transporting ATPase 5189137 5607397 Spro_4695 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001480916.1 5188148 D 399741 CDS YP_001480917.1 157372928 5607077 5189139..5190092 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0367 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; monosaccharide-transporting ATPase 5190092 5607077 Spro_4696 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001480917.1 5189139 D 399741 CDS YP_001480918.1 157372929 5607078 5190103..5191740 1 NC_009832.1 TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: ypi:YpsIP31758_0368 pentulose kinase, FGGY family; FGGY-family pentulose kinase 5191740 5607078 Spro_4697 Serratia proteamaculans 568 FGGY-family pentulose kinase YP_001480918.1 5190103 D 399741 CDS YP_001480919.1 157372930 5607079 5191740..5192339 1 NC_009832.1 PFAM: sugar isomerase (SIS); KEGG: ypi:YpsIP31758_0369 SIS domain protein; sugar isomerase (SIS) 5192339 5607079 Spro_4698 Serratia proteamaculans 568 sugar isomerase (SIS) YP_001480919.1 5191740 D 399741 CDS YP_001480920.1 157372931 5607392 complement(5192384..5194234) 1 NC_009832.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: eca:ECA0053 putative phosphodiesterase; 5'-nucleotidase domain-containing protein 5194234 5607392 Spro_4699 Serratia proteamaculans 568 5'-nucleotidase domain-containing protein YP_001480920.1 5192384 R 399741 CDS YP_001480921.1 157372932 5607393 complement(5194432..5195178) 1 NC_009832.1 predicted SAM-dependent methyltransferase; putative methyltransferase 5195178 5607393 Spro_4700 Serratia proteamaculans 568 putative methyltransferase YP_001480921.1 5194432 R 399741 CDS YP_001480922.1 157372933 5607394 complement(5195187..5197229) 1 NC_009832.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: yps:YPTB3816 oligopeptidase A; oligopeptidase A 5197229 5607394 Spro_4701 Serratia proteamaculans 568 oligopeptidase A YP_001480922.1 5195187 R 399741 CDS YP_001480923.1 157372934 5607170 complement(5197321..5198013) 1 NC_009832.1 PFAM: regulatory protein GntR HTH; KEGG: sde:Sde_1768 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; GntR family transcriptional regulator 5198013 5607170 Spro_4702 Serratia proteamaculans 568 GntR family transcriptional regulator YP_001480923.1 5197321 R 399741 CDS YP_001480924.1 157372935 5607171 complement(5198056..5199333) 1 NC_009832.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rsh:Rsph17029_0257 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 5199333 5607171 Spro_4703 Serratia proteamaculans 568 TRAP dicarboxylate transporter subunit DctM YP_001480924.1 5198056 R 399741 CDS YP_001480925.1 157372936 5607172 complement(5199330..5199800) 1 NC_009832.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ecv:APECO1_2070 C4-dicarboxylate transport system permease small protein; tripartite ATP-independent periplasmic transporter DctQ 5199800 5607172 Spro_4704 Serratia proteamaculans 568 tripartite ATP-independent periplasmic transporter DctQ YP_001480925.1 5199330 R 399741 CDS YP_001480926.1 157372937 5606890 complement(5199855..5200841) 1 NC_009832.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: oan:Oant_3902 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 5200841 5606890 Spro_4705 Serratia proteamaculans 568 TRAP dicarboxylate transporter subunit DctP YP_001480926.1 5199855 R 399741 CDS YP_001480927.1 157372938 5606891 complement(5200888..5201913) 1 NC_009832.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eca:ECA4382 putative zinc-binding dehydrogenase; alcohol dehydrogenase 5201913 5606891 Spro_4706 Serratia proteamaculans 568 alcohol dehydrogenase YP_001480927.1 5200888 R 399741 CDS YP_001480928.1 157372939 5606892 complement(5201903..5202676) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ent:Ent638_3295 2-deoxy-D-gluconate 3-dehydrogenase; short-chain dehydrogenase/reductase SDR 5202676 5606892 Spro_4707 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001480928.1 5201903 R 399741 CDS YP_001480929.1 157372940 5605432 complement(5202687..5203763) 1 NC_009832.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pol:Bpro_3962 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 5203763 5605432 Spro_4708 Serratia proteamaculans 568 mandelate racemase/muconate lactonizing protein YP_001480929.1 5202687 R 399741 CDS YP_001480930.1 157372941 5605433 complement(5204067..5204528) 1 NC_009832.1 PFAM: histidine triad (HIT) protein; KEGG: stm:STM3167 putative diadenosine tetraphosphatehydrolase; histidine triad (HIT) protein 5204528 5605433 Spro_4709 Serratia proteamaculans 568 histidine triad (HIT) protein YP_001480930.1 5204067 R 399741 CDS YP_001480931.1 157372942 5605434 complement(5204613..5206058) 1 NC_009832.1 PFAM: Amidase; KEGG: bte:BTH_II1476 6-aminohexanoate-cyclic-dimer hydrolase; amidase 5206058 5605434 Spro_4710 Serratia proteamaculans 568 amidase YP_001480931.1 5204613 R 399741 CDS YP_001480932.1 157372943 5606277 5206205..5207083 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bpl:BURPS1106A_A0260 transcriptional regulator, LysR family; LysR family transcriptional regulator 5207083 5606277 Spro_4711 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001480932.1 5206205 D 399741 CDS YP_001480933.1 157372944 5606278 complement(5207084..5207488) 1 NC_009832.1 PFAM: protein of unknown function DUF437; KEGG: eca:ECA0252 hypothetical protein; hypothetical protein 5207488 5606278 Spro_4712 Serratia proteamaculans 568 hypothetical protein YP_001480933.1 5207084 R 399741 CDS YP_001480934.1 157372945 5606279 5207624..5208466 1 NC_009832.1 PFAM: protein of unknown function DUF519; KEGG: yen:YE4055 hypothetical protein; hypothetical protein 5208466 5606279 Spro_4713 Serratia proteamaculans 568 hypothetical protein YP_001480934.1 5207624 D 399741 CDS YP_001480935.1 157372946 5606272 5208721..5210073 1 NC_009832.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 5210073 5606272 Spro_4714 Serratia proteamaculans 568 glutathione reductase YP_001480935.1 5208721 D 399741 CDS YP_001480936.1 157372947 5606273 complement(5211111..5212748) 1 NC_009832.1 PFAM: O-antigen polymerase; KEGG: yen:YE0777 putative inner membrane protein; O-antigen polymerase 5212748 5606273 Spro_4715 Serratia proteamaculans 568 O-antigen polymerase YP_001480936.1 5211111 R 399741 CDS YP_001480937.1 157372948 5606274 complement(5212941..5213804) 1 NC_009832.1 KEGG: plu:plu0777 MrfH protein; hypothetical protein 5213804 5606274 Spro_4716 Serratia proteamaculans 568 hypothetical protein YP_001480937.1 5212941 R 399741 CDS YP_001480938.1 157372949 5603425 complement(5213811..5214353) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0776 MrfG protein; fimbrial protein 5214353 5603425 Spro_4717 Serratia proteamaculans 568 fimbrial protein YP_001480938.1 5213811 R 399741 CDS YP_001480939.1 157372950 5603426 complement(5214362..5214853) 1 NC_009832.1 KEGG: plu:plu0775 MrfF protein; MrfF protein 5214853 5603426 Spro_4718 Serratia proteamaculans 568 MrfF protein YP_001480939.1 5214362 R 399741 CDS YP_001480940.1 157372951 5603427 complement(5214850..5215356) 1 NC_009832.1 KEGG: plu:plu0774 MrfE protein; MrfE protein 5215356 5603427 Spro_4719 Serratia proteamaculans 568 MrfE protein YP_001480940.1 5214850 R 399741 CDS YP_001480941.1 157372952 5606819 complement(5215450..5216262) 1 NC_009832.1 hypothetical protein 5216262 5606819 Spro_4720 Serratia proteamaculans 568 hypothetical protein YP_001480941.1 5215450 R 399741 CDS YP_001480942.1 157372953 5606820 complement(5216299..5216961) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0773 MrfX protein; fimbrial protein 5216961 5606820 Spro_4721 Serratia proteamaculans 568 fimbrial protein YP_001480942.1 5216299 R 399741 CDS YP_001480943.1 157372954 5606821 complement(5217000..5217758) 1 NC_009832.1 PFAM: pili assembly chaperone; KEGG: yen:YE0782 pili chaperone protein; pili assembly chaperone 5217758 5606821 Spro_4722 Serratia proteamaculans 568 pili assembly chaperone YP_001480943.1 5217000 R 399741 CDS YP_001480944.1 157372955 5603569 complement(5217798..5220332) 1 NC_009832.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein; fimbrial biogenesis outer membrane usher protein 5220332 5603569 Spro_4723 Serratia proteamaculans 568 fimbrial biogenesis outer membrane usher protein YP_001480944.1 5217798 R 399741 CDS YP_001480945.1 157372956 5603570 complement(5220370..5220915) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: plu:plu0770 MrfB protein; fimbrial protein 5220915 5603570 Spro_4724 Serratia proteamaculans 568 fimbrial protein YP_001480945.1 5220370 R 399741 CDS YP_001480946.1 157372957 5603571 complement(5221003..5221566) 1 NC_009832.1 PFAM: Fimbrial protein; KEGG: yen:YE0779 putative mannose-resistant/Proteus-like fimbrial protein; fimbrial protein 5221566 5603571 Spro_4725 Serratia proteamaculans 568 fimbrial protein YP_001480946.1 5221003 R 399741 CDS YP_001480947.1 157372958 5603072 5221986..5222753 1 NC_009832.1 PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC 5222753 5603072 Spro_4726 Serratia proteamaculans 568 transcriptional regulator CadC YP_001480947.1 5221986 D 399741 CDS YP_001480948.1 157372959 5603073 complement(5222939..5223436) 1 NC_009832.1 hypothetical protein 5223436 5603073 Spro_4727 Serratia proteamaculans 568 hypothetical protein YP_001480948.1 5222939 R 399741 CDS YP_001480949.1 157372960 5603074 complement(5223414..5224184) 1 NC_009832.1 PFAM: transcriptional regulator domain protein; KEGG: eca:ECA0944 hypothetical protein; transcriptional regulator CadC 5224184 5603074 Spro_4728 Serratia proteamaculans 568 transcriptional regulator CadC YP_001480949.1 5223414 R 399741 CDS YP_001480950.1 157372961 5602836 5225349..5226635 1 NC_009832.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rso:RS02477 probable hemagglutinin-related protein; filamentous hemagglutinin outer membrane protein 5226635 5602836 Spro_4729 Serratia proteamaculans 568 filamentous hemagglutinin outer membrane protein YP_001480950.1 5225349 D 399741 CDS YP_001480951.1 157372962 5602837 5226688..5228340 1 NC_009832.1 PFAM: Hemolysin activator HlyB domain protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: eca:ECA0391 putative activator or transporter protein of haemolysin-like protein; hemolysin activator HlyB domain-containing protein 5228340 5602837 Spro_4730 Serratia proteamaculans 568 hemolysin activator HlyB domain-containing protein YP_001480951.1 5226688 D 399741 CDS YP_001480952.1 157372963 5602838 complement(5228390..5228962) 1 NC_009832.1 PFAM: DinB family protein; KEGG: bch:Bcen2424_1988 DinB family protein; DinB family protein 5228962 5602838 Spro_4731 Serratia proteamaculans 568 DinB family protein YP_001480952.1 5228390 R 399741 CDS YP_001480953.1 157372964 5602742 complement(5229082..5229855) 1 NC_009832.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_pAT_203 hypothetical protein; AraC family transcriptional regulator 5229855 5602742 Spro_4732 Serratia proteamaculans 568 AraC family transcriptional regulator YP_001480953.1 5229082 R 399741 CDS YP_001480954.1 157372965 5602743 5229929..5230576 1 NC_009832.1 KEGG: bxe:Bxe_B2768 hypothetical protein; hypothetical protein 5230576 5602743 Spro_4733 Serratia proteamaculans 568 hypothetical protein YP_001480954.1 5229929 D 399741 CDS YP_001480955.1 157372966 5602744 5230738..5231232 1 NC_009832.1 PFAM: oxidoreductase molybdopterin binding; KEGG: bxe:Bxe_B1772 hypothetical protein; molybdopterin-binding oxidoreductase 5231232 5602744 Spro_4734 Serratia proteamaculans 568 molybdopterin-binding oxidoreductase YP_001480955.1 5230738 D 399741 CDS YP_001480956.1 157372967 5603859 5231229..5233013 1 NC_009832.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sec:SC039 hypothetical protein; integral membrane sensor hybrid histidine kinase 5233013 5603859 Spro_4735 Serratia proteamaculans 568 integral membrane sensor hybrid histidine kinase YP_001480956.1 5231229 D 399741 CDS YP_001480957.1 157372968 5603860 complement(5233003..5233854) 1 NC_009832.1 PFAM: response regulator receiver; BetR domain protein; KEGG: bxe:Bxe_B1770 response regulator receiver domain protein(CheY); response regulator receiver protein 5233854 5603860 Spro_4736 Serratia proteamaculans 568 response regulator receiver protein YP_001480957.1 5233003 R 399741 CDS YP_001480958.1 157372969 5603861 complement(5234327..5237428) 1 NC_009832.1 TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: pfo:Pfl_2684 outer membrane autotransporter barrel; outer membrane autotransporter 5237428 5603861 Spro_4737 Serratia proteamaculans 568 outer membrane autotransporter YP_001480958.1 5234327 R 399741 CDS YP_001480959.1 157372970 5603874 complement(5237497..5240511) 1 NC_009832.1 TIGRFAM: outer membrane autotransporter barrel domain; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: pfo:Pfl_2684 outer membrane autotransporter barrel; outer membrane autotransporter 5240511 5603874 Spro_4738 Serratia proteamaculans 568 outer membrane autotransporter YP_001480959.1 5237497 R 399741 CDS YP_001480960.1 157372971 5603875 complement(5241004..5241657) 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: yps:YPTB0195 putative TetR-family regulatory protein; TetR family transcriptional regulator 5241657 5603875 Spro_4739 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001480960.1 5241004 R 399741 CDS YP_001480961.1 157372972 5603876 5241914..5243143 1 NC_009832.1 PFAM: protein of unknown function UPF0261; KEGG: yps:YPTB0196 hypothetical protein; hypothetical protein 5243143 5603876 Spro_4740 Serratia proteamaculans 568 hypothetical protein YP_001480961.1 5241914 D 399741 CDS YP_001480962.1 157372973 5603894 complement(5243217..5243717) 1 NC_009832.1 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; periplasmic protein 5243717 5603894 Spro_4741 Serratia proteamaculans 568 periplasmic protein YP_001480962.1 5243217 R 399741 CDS YP_001480963.1 157372974 5603895 5244279..5246273 1 NC_009832.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator 5246273 5603895 Spro_4742 Serratia proteamaculans 568 RNase II stability modulator YP_001480963.1 5244279 D 399741 CDS YP_001480964.1 157372975 5603896 complement(5246290..5247168) 1 NC_009832.1 regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes; enoyl-CoA hydratase 5247168 5603896 Spro_4743 Serratia proteamaculans 568 enoyl-CoA hydratase YP_001480964.1 5246290 R 399741 CDS YP_001480965.1 157372976 5603900 5247497..5248516 1 NC_009832.1 TIGRFAM: putative ribonuclease; PFAM: ribonuclease BN; KEGG: yen:YE4060 hypothetical protein; putative ribonuclease 5248516 5603900 Spro_4744 Serratia proteamaculans 568 putative ribonuclease YP_001480965.1 5247497 D 399741 CDS YP_001480966.1 157372977 5603901 5248845..5250167 1 NC_009832.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: eca:ECA0769 probable transporter; major facilitator superfamily metabolite/H(+) symporter 5250167 5603901 Spro_4745 Serratia proteamaculans 568 major facilitator superfamily metabolite/H(+) symporter YP_001480966.1 5248845 D 399741 CDS YP_001480967.1 157372978 5603902 5250242..5251039 1 NC_009832.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: yen:YE4061 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 5251039 5603902 Spro_4746 Serratia proteamaculans 568 CDP-diacylglycerol pyrophosphatase YP_001480967.1 5250242 D 399741 CDS YP_001480968.1 157372979 5603936 complement(5251069..5253105) 1 NC_009832.1 PFAM: AsmA family protein; KEGG: yen:YE4062 hypothetical protein; AsmA family protein 5253105 5603936 Spro_4747 Serratia proteamaculans 568 AsmA family protein YP_001480968.1 5251069 R 399741 CDS YP_001480969.1 157372980 5603937 complement(5253208..5254008) 1 NC_009832.1 in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein 5254008 5603937 Spro_4748 Serratia proteamaculans 568 EAL domain-containing protein YP_001480969.1 5253208 R 399741 CDS YP_001480970.1 157372981 5603938 5254138..5254341 1 NC_009832.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: yps:YPTB3829 possible tautomerase enzyme; 4-oxalocrotonate tautomerase 5254341 5603938 Spro_4749 Serratia proteamaculans 568 4-oxalocrotonate tautomerase YP_001480970.1 5254138 D 399741 CDS YP_001480971.1 157372982 5603732 5254507..5255439 1 NC_009832.1 PFAM: PfkB domain protein; KEGG: ypi:YpsIP31758_4062 2-dehydro-3-deoxygluconokinase; ribokinase-like domain-containing protein 5255439 5603732 Spro_4750 Serratia proteamaculans 568 ribokinase-like domain-containing protein YP_001480971.1 5254507 D 399741 CDS YP_001480972.1 157372983 5603733 complement(5255637..5257112) 1 NC_009832.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 5257112 5603733 Spro_4751 Serratia proteamaculans 568 ketol-acid reductoisomerase YP_001480972.1 5255637 R 399741 CDS YP_001480973.1 157372984 5603734 5257262..5258176 1 NC_009832.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 5258176 5603734 Spro_4752 Serratia proteamaculans 568 DNA-binding transcriptional regulator IlvY YP_001480973.1 5257262 D 399741 CDS YP_001480974.1 157372985 5604088 complement(5258171..5258872) 1 NC_009832.1 KEGG: eca:ECA4224 hypothetical protein; hypothetical protein 5258872 5604088 Spro_4753 Serratia proteamaculans 568 hypothetical protein YP_001480974.1 5258171 R 399741 CDS YP_001480975.1 157372986 5604089 complement(5258895..5259473) 1 NC_009832.1 hypothetical protein 5259473 5604089 Spro_4754 Serratia proteamaculans 568 hypothetical protein YP_001480975.1 5258895 R 399741 CDS YP_001480976.1 157372987 5604090 complement(5259473..5260468) 1 NC_009832.1 KEGG: sfr:Sfri_3972 hypothetical protein; hypothetical protein 5260468 5604090 Spro_4755 Serratia proteamaculans 568 hypothetical protein YP_001480976.1 5259473 R 399741 CDS YP_001480977.1 157372988 5604254 complement(5260582..5262126) 1 NC_009832.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 5262126 5604254 Spro_4756 Serratia proteamaculans 568 threonine dehydratase YP_001480977.1 5260582 R 399741 CDS YP_001480978.1 157372989 5604255 complement(5262132..5263982) 1 NC_009832.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 5263982 5604255 Spro_4757 Serratia proteamaculans 568 dihydroxy-acid dehydratase YP_001480978.1 5262132 R 399741 CDS YP_001480979.1 157372990 5604256 complement(5264088..5265014) 1 NC_009832.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 5265014 5604256 Spro_4758 Serratia proteamaculans 568 branched-chain amino acid aminotransferase YP_001480979.1 5264088 R 399741 CDS YP_001480980.1 157372991 5604321 complement(5265037..5265294) 1 NC_009832.1 KEGG: yen:YE0149 acetolactate synthase isozyme II small subunit; acetolactate synthase 2 regulatory subunit 5265294 ilvM 5604321 ilvM Serratia proteamaculans 568 acetolactate synthase 2 regulatory subunit YP_001480980.1 5265037 R 399741 CDS YP_001480981.1 157372992 5604322 complement(5265291..5266937) 1 NC_009832.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 5266937 5604322 Spro_4760 Serratia proteamaculans 568 acetolactate synthase 2 catalytic subunit YP_001480981.1 5265291 R 399741 CDS YP_001480982.1 157372993 5604323 complement(5267312..5268544) 1 NC_009832.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: kpn:KPN_01755 putative transporter; major facilitator transporter 5268544 5604323 Spro_4761 Serratia proteamaculans 568 major facilitator transporter YP_001480982.1 5267312 R 399741 CDS YP_001480983.1 157372994 5604504 5268886..5270409 1 NC_009832.1 KEGG: eca:ECA4230 probable magnesium-chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 5270409 5604504 Spro_4762 Serratia proteamaculans 568 Mg chelatase subunit ChlI YP_001480983.1 5268886 D 399741 CDS YP_001480984.1 157372995 5604505 complement(5270437..5270775) 1 NC_009832.1 PFAM: protein of unknown function DUF413; KEGG: yen:YE0146 hypothetical protein; hypothetical protein 5270775 5604505 Spro_4763 Serratia proteamaculans 568 hypothetical protein YP_001480984.1 5270437 R 399741 CDS YP_001480985.1 157372996 5604506 5270889..5271722 1 NC_009832.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 5271722 5604506 Spro_4764 Serratia proteamaculans 568 transcriptional regulator HdfR YP_001480985.1 5270889 D 399741 CDS YP_001480986.1 157372997 5604574 complement(5271727..5272719) 1 NC_009832.1 membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF 5272719 5604574 Spro_4765 Serratia proteamaculans 568 inner membrane ABC transporter permease YjfF YP_001480986.1 5271727 R 399741 CDS YP_001480987.1 157372998 5604575 complement(5272716..5273738) 1 NC_009832.1 PFAM: inner-membrane translocator; KEGG: yps:YPTB0129 ABC ribose/sugar transporter, permease domain; monosaccharide-transporting ATPase 5273738 5604575 Spro_4766 Serratia proteamaculans 568 monosaccharide-transporting ATPase YP_001480987.1 5272716 R 399741 CDS YP_001480988.1 157372999 5604576 complement(5273739..5275250) 1 NC_009832.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_3519 sugar transport system ATP-binding protein; ABC transporter-like protein 5275250 5604576 Spro_4767 Serratia proteamaculans 568 ABC transporter-like protein YP_001480988.1 5273739 R 399741 CDS YP_001480989.1 157373000 5604604 complement(5275274..5276230) 1 NC_009832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0141 putative periplasmic protein precursor; periplasmic binding protein/LacI transcriptional regulator 5276230 5604604 Spro_4768 Serratia proteamaculans 568 periplasmic binding protein/LacI transcriptional regulator YP_001480989.1 5275274 R 399741 CDS YP_001480990.1 157373001 5602457 complement(5282532..5283395) 1 NC_009832.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 5283395 5602457 Spro_4769 Serratia proteamaculans 568 glutamate racemase YP_001480990.1 5282532 R 399741 CDS YP_001480991.1 157373002 5604606 complement(5283340..5285211) 1 NC_009832.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 5285211 btuB 5604606 btuB Serratia proteamaculans 568 vitamin B12/cobalamin outer membrane transporter YP_001480991.1 5283340 R 399741 CDS YP_001480992.1 157373003 5604631 5285613..5286716 1 NC_009832.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 5286716 5604631 Spro_4771 Serratia proteamaculans 568 tRNA (uracil-5-)-methyltransferase YP_001480992.1 5285613 D 399741 CDS YP_001480993.1 157373004 5604632 complement(5286761..5287129) 1 NC_009832.1 PFAM: protein of unknown function DUF1422; KEGG: eca:ECA4240 hypothetical protein; hypothetical protein 5287129 5604632 Spro_4772 Serratia proteamaculans 568 hypothetical protein YP_001480993.1 5286761 R 399741 CDS YP_001480994.1 157373005 5604633 complement(5287143..5287781) 1 NC_009832.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 5287781 5604633 Spro_4773 Serratia proteamaculans 568 DNA-binding transcriptional repressor FabR YP_001480994.1 5287143 R 399741 CDS YP_001480995.1 157373006 5604663 5287993..5289390 1 NC_009832.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 5289390 5604663 Spro_4774 Serratia proteamaculans 568 soluble pyridine nucleotide transhydrogenase YP_001480995.1 5287993 D 399741 CDS YP_001480996.1 157373007 5604664 complement(5289373..5290290) 1 NC_009832.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 5290290 5604664 Spro_4775 Serratia proteamaculans 568 DNA-binding transcriptional regulator OxyR YP_001480996.1 5289373 R 399741 CDS YP_001480997.1 157373008 5604665 5290442..5291173 1 NC_009832.1 KEGG: yen:YE0132 putative peroxiredoxin/glutaredoxin family protein; TIGRFAM: glutaredoxin-family domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; glutaredoxin; glutaredoxin 2; Redoxin domain protein; glutaredoxin family protein 5291173 5604665 Spro_4776 Serratia proteamaculans 568 glutaredoxin family protein YP_001480997.1 5290442 D 399741 CDS YP_001480998.1 157373009 5604669 5291251..5292699 1 NC_009832.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 5292699 5604669 Spro_4777 Serratia proteamaculans 568 dihydrolipoamide dehydrogenase YP_001480998.1 5291251 D 399741 CDS YP_001480999.1 157373010 5604670 complement(5292764..5294137) 1 NC_009832.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5294137 5604670 Spro_4778 Serratia proteamaculans 568 argininosuccinate lyase YP_001480999.1 5292764 R 399741 CDS YP_001481000.1 157373011 5604671 complement(5294214..5295434) 1 NC_009832.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 5295434 5604671 Spro_4779 Serratia proteamaculans 568 argininosuccinate synthase YP_001481000.1 5294214 R 399741 CDS YP_001481001.1 157373012 5604720 complement(5295460..5296233) 1 NC_009832.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 5296233 5604720 Spro_4780 Serratia proteamaculans 568 acetylglutamate kinase YP_001481001.1 5295460 R 399741 CDS YP_001481002.1 157373013 5604721 complement(5296263..5297267) 1 NC_009832.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 5297267 argC 5604721 argC Serratia proteamaculans 568 N-acetyl-gamma-glutamyl-phosphate reductase YP_001481002.1 5296263 R 399741 CDS YP_001481003.1 157373014 5604722 5297484..5298629 1 NC_009832.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 5298629 5604722 Spro_4782 Serratia proteamaculans 568 acetylornithine deacetylase YP_001481003.1 5297484 D 399741 CDS YP_001481004.1 157373015 5604816 5298888..5301524 1 NC_009832.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 5301524 5604816 Spro_4783 Serratia proteamaculans 568 phosphoenolpyruvate carboxylase YP_001481004.1 5298888 D 399741 CDS YP_001481005.1 157373016 5604817 complement(5301631..5302524) 1 NC_009832.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 5302524 metF 5604817 metF Serratia proteamaculans 568 5,10-methylenetetrahydrofolate reductase YP_001481005.1 5301631 R 399741 CDS YP_001481006.1 157373017 5604818 complement(5302752..5305187) 1 NC_009832.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 5305187 metL 5604818 metL Serratia proteamaculans 568 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_001481006.1 5302752 R 399741 CDS YP_001481007.1 157373018 5604939 complement(5305190..5306350) 1 NC_009832.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 5306350 5604939 Spro_4786 Serratia proteamaculans 568 cystathionine gamma-synthase YP_001481007.1 5305190 R 399741 CDS YP_001481008.1 157373019 5604940 5306668..5306985 1 NC_009832.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 5306985 5604940 Spro_4787 Serratia proteamaculans 568 transcriptional repressor protein MetJ YP_001481008.1 5306668 D 399741 CDS YP_001481009.1 157373020 5604941 complement(5307067..5307282) 1 NC_009832.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 5307282 rpmE 5604941 rpmE Serratia proteamaculans 568 50S ribosomal protein L31 YP_001481009.1 5307067 R 399741 CDS YP_001481010.1 157373021 5604975 5307481..5309676 1 NC_009832.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 5309676 5604975 Spro_4789 Serratia proteamaculans 568 primosome assembly protein PriA YP_001481010.1 5307481 D 399741 CDS YP_001481011.1 157373022 5604976 5309965..5310993 1 NC_009832.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 5310993 5604976 Spro_4790 Serratia proteamaculans 568 DNA-binding transcriptional regulator CytR YP_001481011.1 5309965 D 399741 CDS YP_001481012.1 157373023 5604977 5311059..5311997 1 NC_009832.1 TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: yen:YE0106 cell division protein; cell division protein FtsN 5311997 5604977 Spro_4791 Serratia proteamaculans 568 cell division protein FtsN YP_001481012.1 5311059 D 399741 CDS YP_001481013.1 157373024 5604985 5312100..5312630 1 NC_009832.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 5312630 5604985 Spro_4792 Serratia proteamaculans 568 ATP-dependent protease peptidase subunit YP_001481013.1 5312100 D 399741 CDS YP_001481014.1 157373025 5604986 5312643..5313977 1 NC_009832.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 5313977 hslU 5604986 hslU Serratia proteamaculans 568 ATP-dependent protease ATP-binding subunit HslU YP_001481014.1 5312643 D 399741 CDS YP_001481015.1 157373026 5604987 5314071..5314988 1 NC_009832.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 5314988 5604987 Spro_4794 Serratia proteamaculans 568 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001481015.1 5314071 D 399741 CDS YP_001481016.1 157373027 5605190 5315069..5315554 1 NC_009832.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 5315554 5605190 Spro_4795 Serratia proteamaculans 568 ribonuclease activity regulator protein RraA YP_001481016.1 5315069 D 399741 CDS YP_001481017.1 157373028 5605191 complement(5315611..5315850) 1 NC_009832.1 PFAM: protein of unknown function DUF904; KEGG: yen:YE0101 hypothetical protein; hypothetical protein 5315850 5605191 Spro_4796 Serratia proteamaculans 568 hypothetical protein YP_001481017.1 5315611 R 399741 CDS YP_001481018.1 157373029 5605192 5316390..5317235 1 NC_009832.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: eca:ECA4266 glycerol uptake facilitator protein; MIP family channel protein 5317235 5605192 Spro_4797 Serratia proteamaculans 568 MIP family channel protein YP_001481018.1 5316390 D 399741 CDS YP_001481019.1 157373030 5605196 5317279..5318787 1 NC_009832.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: yen:YE0099 glycerol kinase; glycerol kinase 5318787 5605196 Spro_4798 Serratia proteamaculans 568 glycerol kinase YP_001481019.1 5317279 D 399741 CDS YP_001481020.1 157373031 5605197 5318918..5319928 1 NC_009832.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 5319928 glpX 5605197 glpX Serratia proteamaculans 568 fructose 1,6-bisphosphatase II YP_001481020.1 5318918 D 399741 CDS YP_001481021.1 157373032 5605198 complement(5319961..5321145) 1 NC_009832.1 multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D 5321145 emrD 5605198 emrD Serratia proteamaculans 568 multidrug resistance protein D YP_001481021.1 5319961 R 399741 CDS YP_001481022.1 157373033 5605423 5321442..5322065 1 NC_009832.1 KEGG: ppr:PBPRA0239 hypothetical protein; putative transcriptional regulator 5322065 5605423 Spro_4801 Serratia proteamaculans 568 putative transcriptional regulator YP_001481022.1 5321442 D 399741 CDS YP_001481023.1 157373034 5605424 5322069..5322815 1 NC_009832.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: yen:YE0096 ferredoxin--NADP reductase; ferredoxin-NADP reductase 5322815 5605424 Spro_4802 Serratia proteamaculans 568 ferredoxin-NADP reductase YP_001481023.1 5322069 D 399741 CDS YP_001481024.1 157373035 5605425 complement(5322825..5323250) 1 NC_009832.1 PFAM: protein of unknown function DUF805; KEGG: yen:YE0095 hypothetical protein; hypothetical protein 5323250 5605425 Spro_4803 Serratia proteamaculans 568 hypothetical protein YP_001481024.1 5322825 R 399741 CDS YP_001481025.1 157373036 5605475 5323437..5324042 1 NC_009832.1 PFAM: protein of unknown function DUF1454; KEGG: yen:YE0094 hypothetical protein; hypothetical protein 5324042 5605475 Spro_4804 Serratia proteamaculans 568 hypothetical protein YP_001481025.1 5323437 D 399741 CDS YP_001481026.1 157373037 5605476 5324170..5324937 1 NC_009832.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 5324937 tpiA 5605476 tpiA Serratia proteamaculans 568 triosephosphate isomerase YP_001481026.1 5324170 D 399741 CDS YP_001481027.1 157373038 5605477 complement(5325003..5325998) 1 NC_009832.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: ypi:YpsIP31758_0090 sulfate ABC transporter, sulfate-binding protein; sulfate transporter subunit 5325998 5605477 Spro_4806 Serratia proteamaculans 568 sulfate transporter subunit YP_001481027.1 5325003 R 399741 CDS YP_001481028.1 157373039 5605581 complement(5326185..5327147) 1 NC_009832.1 KEGG: stm:STM4062 6-phosphofructokinase I; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 5327147 5605581 Spro_4807 Serratia proteamaculans 568 6-phosphofructokinase YP_001481028.1 5326185 R 399741 CDS YP_001481029.1 157373040 5605582 complement(5327379..5328281) 1 NC_009832.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 5328281 fieF 5605582 fieF Serratia proteamaculans 568 ferrous iron efflux protein F YP_001481029.1 5327379 R 399741 CDS YP_001481030.1 157373041 5605583 complement(5328449..5328892) 1 NC_009832.1 KEGG: stm:STM4060 periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses; periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses 5328892 5605583 Spro_4809 Serratia proteamaculans 568 periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses YP_001481030.1 5328449 R 399741 CDS YP_001481031.1 157373042 5605611 5329042..5329740 1 NC_009832.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 5329740 5605611 Spro_4810 Serratia proteamaculans 568 DNA-binding transcriptional regulator CpxR YP_001481031.1 5329042 D 399741 CDS YP_001481032.1 157373043 5605612 5329737..5331110 1 NC_009832.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 5331110 cpxA 5605612 cpxA Serratia proteamaculans 568 two-component sensor protein YP_001481032.1 5329737 D 399741 CDS YP_001481033.1 157373044 5605613 5331174..5331647 1 NC_009832.1 member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates; putative tRNA/rRNA methyltransferase YibK 5331647 5605613 Spro_4812 Serratia proteamaculans 568 putative tRNA/rRNA methyltransferase YibK YP_001481033.1 5331174 D 399741 CDS YP_001481034.1 157373045 5605824 5331799..5332470 1 NC_009832.1 KEGG: yen:YE3598 hypothetical protein; hypothetical protein 5332470 5605824 Spro_4813 Serratia proteamaculans 568 hypothetical protein YP_001481034.1 5331799 D 399741 CDS YP_001481035.1 157373046 5605825 complement(5332534..5333355) 1 NC_009832.1 catalyzes the O-acetylation of serine; serine acetyltransferase 5333355 cysE 5605825 cysE Serratia proteamaculans 568 serine acetyltransferase YP_001481035.1 5332534 R 399741 CDS YP_001481036.1 157373047 5605826 complement(5333462..5334481) 1 NC_009832.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 5334481 gpsA 5605826 gpsA Serratia proteamaculans 568 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001481036.1 5333462 R 399741 CDS YP_001481037.1 157373048 5605961 complement(5334481..5334951) 1 NC_009832.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 5334951 5605961 Spro_4816 Serratia proteamaculans 568 preprotein translocase subunit SecB YP_001481037.1 5334481 R 399741 CDS YP_001481038.1 157373049 5605962 complement(5335011..5335259) 1 NC_009832.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: yen:YE0079 glutaredoxin; glutaredoxin 3 5335259 5605962 Spro_4817 Serratia proteamaculans 568 glutaredoxin 3 YP_001481038.1 5335011 R 399741 CDS YP_001481039.1 157373050 5605963 complement(5335288..5335722) 1 NC_009832.1 PFAM: Rhodanese domain protein; KEGG: yen:YE0078 hypothetical protein; rhodanese domain-containing protein 5335722 5605963 Spro_4818 Serratia proteamaculans 568 rhodanese domain-containing protein YP_001481039.1 5335288 R 399741 CDS YP_001481040.1 157373051 5605803 5336022..5337566 1 NC_009832.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 5337566 5605803 Spro_4819 Serratia proteamaculans 568 phosphoglyceromutase YP_001481040.1 5336022 D 399741 CDS YP_001481041.2 229593537 5605804 5337576..5338910 1 NC_009832.1 PFAM: peptidase M23B; KEGG: ypi:YpsIP31758_0074 peptidase, M23 family domain protein; hypothetical protein 5338910 5605804 Spro_4820 Serratia proteamaculans 568 hypothetical protein YP_001481041.2 5337576 D 399741 CDS YP_001481042.1 157373053 5605805 5338913..5339869 1 NC_009832.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: yen:YE0075 hypothetical protein; hypothetical protein 5339869 5605805 Spro_4821 Serratia proteamaculans 568 hypothetical protein YP_001481042.1 5338913 D 399741 CDS YP_001481043.1 157373054 5606065 5340226..5342511 1 NC_009832.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: sdy:SDY_4094 biodegradative arginine decarboxylase; lysine decarboxylase 5342511 5606065 Spro_4822 Serratia proteamaculans 568 lysine decarboxylase YP_001481043.1 5340226 D 399741 CDS YP_001481044.1 157373055 5606066 complement(5342615..5343640) 1 NC_009832.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 5343640 tdh 5606066 tdh Serratia proteamaculans 568 L-threonine 3-dehydrogenase YP_001481044.1 5342615 R 399741 CDS YP_001481045.1 157373056 5606067 complement(5343650..5344846) 1 NC_009832.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 5344846 5606067 Spro_4824 Serratia proteamaculans 568 2-amino-3-ketobutyrate coenzyme A ligase YP_001481045.1 5343650 R 399741 CDS YP_001481046.1 157373057 5606103 5345087..5346016 1 NC_009832.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-mannoheptose-6-epimerase 5346016 rfaD 5606103 rfaD Serratia proteamaculans 568 ADP-L-glycero-D-mannoheptose-6-epimerase YP_001481046.1 5345087 D 399741 CDS YP_001481047.1 157373058 5606104 5346040..5347086 1 NC_009832.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose:LPS heptosyltransferase II 5347086 5606104 Spro_4826 Serratia proteamaculans 568 ADP-heptose:LPS heptosyltransferase II YP_001481047.1 5346040 D 399741 CDS YP_001481048.1 157373059 5606105 5347089..5348060 1 NC_009832.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: ypi:YpsIP31758_0068 lipopolysaccharide heptosyltransferase I; ADP-heptose:LPS heptosyl transferase I 5348060 5606105 Spro_4827 Serratia proteamaculans 568 ADP-heptose:LPS heptosyl transferase I YP_001481048.1 5347089 D 399741 CDS YP_001481049.1 157373060 5606816 5348060..5348962 1 NC_009832.1 KEGG: sgl:SG2197 putative lipopolysaccharide glycosyltransferase; putative lipopolysaccharide glycosyltransferase 5348962 5606816 Spro_4828 Serratia proteamaculans 568 putative lipopolysaccharide glycosyltransferase YP_001481049.1 5348060 D 399741 CDS YP_001481050.1 157373061 5606817 5348946..5350115 1 NC_009832.1 PFAM: O-antigen polymerase; KEGG: sgl:SG0240 putative lipid A core surface polymer ligase; O-antigen polymerase 5350115 5606817 Spro_4829 Serratia proteamaculans 568 O-antigen polymerase YP_001481050.1 5348946 D 399741 CDS YP_001481051.1 157373062 5606818 complement(5350180..5351271) 1 NC_009832.1 PFAM: glycosyl transferase family 9; KEGG: sfu:Sfum_0372 glycosyl transferase, family 9; glycosyl transferase family protein 5351271 5606818 Spro_4830 Serratia proteamaculans 568 glycosyl transferase family protein YP_001481051.1 5350180 R 399741 CDS YP_001481052.1 157373063 5603467 complement(5351273..5352229) 1 NC_009832.1 KEGG: plu:plu4850 WalW protein; WalW protein 5352229 5603467 Spro_4831 Serratia proteamaculans 568 WalW protein YP_001481052.1 5351273 R 399741 CDS YP_001481053.1 157373064 5603468 5352442..5353524 1 NC_009832.1 TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; PFAM: glycosyl transferase family 9; KEGG: plu:plu4853 lipopolysaccharide core biosynthesis glycosyl transferase RfaQ; lipopolysaccharide heptosyltransferase III 5353524 5603468 Spro_4832 Serratia proteamaculans 568 lipopolysaccharide heptosyltransferase III YP_001481053.1 5352442 D 399741 CDS YP_001481054.1 157373065 5603469 5353521..5354648 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: kpn:KPN_03969 glucuronic acid transferase; group 1 glycosyl transferase 5354648 5603469 Spro_4833 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001481054.1 5353521 D 399741 CDS YP_001481055.1 157373066 5602594 5354651..5355748 1 NC_009832.1 PFAM: glycosyl transferase group 1; KEGG: sgl:SG2200 putative lipopolysaccharide glycosyltransferase; group 1 glycosyl transferase 5355748 5602594 Spro_4834 Serratia proteamaculans 568 group 1 glycosyl transferase YP_001481055.1 5354651 D 399741 CDS YP_001481056.1 157373067 5602595 complement(5355780..5356793) 1 NC_009832.1 PFAM: glycosyl transferase family 9; KEGG: dar:Daro_0162 glycosyl transferase, family 9; glycosyl transferase family protein 5356793 5602595 Spro_4835 Serratia proteamaculans 568 glycosyl transferase family protein YP_001481056.1 5355780 R 399741 CDS YP_001481057.1 157373068 5602596 5356919..5358196 1 NC_009832.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 5358196 5602596 Spro_4836 Serratia proteamaculans 568 3-deoxy-D-manno-octulosonic-acid transferase YP_001481057.1 5356919 D 399741 CDS YP_001481058.1 157373069 5607068 5358197..5358970 1 NC_009832.1 PFAM: glycosyl transferase family 2; KEGG: yen:YE0068 lipopolysaccharide core biosynthesis glycosyl transferase; glycosyl transferase family protein 5358970 5607068 Spro_4837 Serratia proteamaculans 568 glycosyl transferase family protein YP_001481058.1 5358197 D 399741 CDS YP_001481059.1 157373070 5607069 5358974..5359459 1 NC_009832.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 5359459 coaD 5607069 coaD Serratia proteamaculans 568 phosphopantetheine adenylyltransferase YP_001481059.1 5358974 D 399741 CDS YP_001481060.1 157373071 5607070 complement(5359460..5360269) 1 NC_009832.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 5360269 5607070 Spro_4839 Serratia proteamaculans 568 formamidopyrimidine-DNA glycosylase YP_001481060.1 5359460 R 399741 CDS YP_001481061.1 157373072 5603508 complement(5360349..5360516) 1 NC_009832.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 5360516 rpmG 5603508 rpmG Serratia proteamaculans 568 50S ribosomal protein L33 YP_001481061.1 5360349 R 399741 CDS YP_001481062.1 157373073 5603509 complement(5360528..5360764) 1 NC_009832.1 required for 70S ribosome assembly; 50S ribosomal protein L28 5360764 rpmB 5603509 rpmB Serratia proteamaculans 568 50S ribosomal protein L28 YP_001481062.1 5360528 R 399741 CDS YP_001481063.1 157373074 5603510 complement(5361028..5361711) 1 NC_009832.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 5361711 radC 5603510 radC Serratia proteamaculans 568 DNA repair protein RadC YP_001481063.1 5361028 R 399741 CDS YP_001481064.1 157373075 5602655 5361892..5363109 1 NC_009832.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 5363109 5602655 Spro_4843 Serratia proteamaculans 568 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001481064.1 5361892 D 399741 CDS YP_001481065.1 157373076 5602656 5363087..5363545 1 NC_009832.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 5363545 dut 5602656 dut Serratia proteamaculans 568 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001481065.1 5363087 D 399741 CDS YP_001481066.1 157373077 5602657 5363801..5364397 1 NC_009832.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 5364397 slmA 5602657 slmA Serratia proteamaculans 568 nucleoid occlusion protein YP_001481066.1 5363801 D 399741 CDS YP_001481067.1 157373078 5603685 complement(5364446..5365087) 1 NC_009832.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 5365087 pyrE 5603685 pyrE Serratia proteamaculans 568 orotate phosphoribosyltransferase YP_001481067.1 5364446 R 399741 CDS YP_001481068.1 157373079 5603686 complement(5365179..5365895) 1 NC_009832.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 5365895 rph 5603686 rph Serratia proteamaculans 568 ribonuclease PH YP_001481068.1 5365179 R 399741 CDS YP_001481069.1 157373080 5603687 5366022..5366885 1 NC_009832.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: yen:YE0057 hypothetical protein; hypothetical protein 5366885 5603687 Spro_4848 Serratia proteamaculans 568 hypothetical protein YP_001481069.1 5366022 D 399741 CDS YP_001481070.1 157373081 5603669 complement(5367158..5369569) 1 NC_009832.1 PFAM: Pyrrolo-quinoline quinone; KEGG: psb:Psyr_3930 quinoprotein; Pyrrolo-quinoline quinone 5369569 5603669 Spro_4849 Serratia proteamaculans 568 Pyrrolo-quinoline quinone YP_001481070.1 5367158 R 399741 CDS YP_001481071.1 157373082 5603670 complement(5369566..5370468) 1 NC_009832.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sen:SACE_4169 esterase/lipase; alpha/beta hydrolase domain-containing protein 5370468 5603670 Spro_4850 Serratia proteamaculans 568 alpha/beta hydrolase domain-containing protein YP_001481071.1 5369566 R 399741 CDS YP_001481072.1 157373083 5603671 5370540..5371169 1 NC_009832.1 PFAM: regulatory protein TetR; KEGG: fal:FRAAL5169 putative TetR-family transcriptional regulator; TetR family transcriptional regulator 5371169 5603671 Spro_4851 Serratia proteamaculans 568 TetR family transcriptional regulator YP_001481072.1 5370540 D 399741 CDS YP_001481073.1 157373084 5603166 5371371..5372618 1 NC_009832.1 TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: ypi:YpsIP31758_2550 paraquat-inducible protein A; PqiA family integral membrane protein 5372618 5603166 Spro_4852 Serratia proteamaculans 568 PqiA family integral membrane protein YP_001481073.1 5371371 D 399741 CDS YP_001481074.1 157373085 5603167 5372602..5374245 1 NC_009832.1 PFAM: Mammalian cell entry related domain protein; KEGG: yen:YE1574 putative paraquat-inducible protein B; paraquat-inducible protein B 5374245 5603167 Spro_4853 Serratia proteamaculans 568 paraquat-inducible protein B YP_001481074.1 5372602 D 399741 CDS YP_001481075.1 157373086 5603168 5374242..5374790 1 NC_009832.1 PFAM: protein of unknown function DUF330; KEGG: yen:YE1575 putative lipoprotein protein; hypothetical protein 5374790 5603168 Spro_4854 Serratia proteamaculans 568 hypothetical protein YP_001481075.1 5374242 D 399741 CDS YP_001481076.1 157373087 5604194 5375366..5377165 1 NC_009832.1 PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: mgi:Mflv_4863 strictosidine synthase; strictosidine synthase 5377165 5604194 Spro_4855 Serratia proteamaculans 568 strictosidine synthase YP_001481076.1 5375366 D 399741 CDS YP_001481077.1 157373088 5604195 5377288..5378301 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3797 probable LysR-family transcriptional regulatory protein; LysR family transcriptional regulator 5378301 5604195 Spro_4856 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001481077.1 5377288 D 399741 CDS YP_001481078.1 157373089 5604196 complement(5378488..5379666) 1 NC_009832.1 KEGG: mmr:Mmar10_2665 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 5379666 5604196 Spro_4857 Serratia proteamaculans 568 acetyl-CoA acetyltransferase YP_001481078.1 5378488 R 399741 CDS YP_001481079.1 157373090 5604032 complement(5379676..5380566) 1 NC_009832.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_C7556 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5380566 5604032 Spro_4858 Serratia proteamaculans 568 short-chain dehydrogenase/reductase SDR YP_001481079.1 5379676 R 399741 CDS YP_001481080.1 157373091 5604033 complement(5380578..5382116) 1 NC_009832.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reh:H16_A2076 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 5382116 5604033 Spro_4859 Serratia proteamaculans 568 AMP-dependent synthetase and ligase YP_001481080.1 5380578 R 399741 CDS YP_001481081.1 157373092 5604034 complement(5382552..5382950) 1 NC_009832.1 hypothetical protein 5382950 5604034 Spro_4860 Serratia proteamaculans 568 hypothetical protein YP_001481081.1 5382552 R 399741 CDS YP_001481082.1 157373093 5604439 5383318..5384502 1 NC_009832.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: yen:YE0051 nucleoside permease; nucleoside transporter 5384502 5604439 Spro_4861 Serratia proteamaculans 568 nucleoside transporter YP_001481082.1 5383318 D 399741 CDS YP_001481083.1 157373094 5604440 complement(5384540..5384974) 1 NC_009832.1 KEGG: yen:YE0050 hypothetical protein; hypothetical protein 5384974 5604440 Spro_4862 Serratia proteamaculans 568 hypothetical protein YP_001481083.1 5384540 R 399741 CDS YP_001481084.1 157373095 5604441 5385257..5385874 1 NC_009832.1 PFAM: protein of unknown function UPF0126; KEGG: ypi:YpsIP31758_0043 hypothetical protein; hypothetical protein 5385874 5604441 Spro_4863 Serratia proteamaculans 568 hypothetical protein YP_001481084.1 5385257 D 399741 CDS YP_001481085.1 157373096 5604607 complement(5385882..5386775) 1 NC_009832.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2915 transcriptional regulator, LysR family; LysR family transcriptional regulator 5386775 5604607 Spro_4864 Serratia proteamaculans 568 LysR family transcriptional regulator YP_001481085.1 5385882 R 399741 CDS YP_001481086.1 157373097 5604608 5386892..5388463 1 NC_009832.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_2916 major facilitator family transporter; major facilitator transporter 5388463 5604608 Spro_4865 Serratia proteamaculans 568 major facilitator transporter YP_001481086.1 5386892 D 399741 CDS YP_001481087.1 157373098 5602854 5390448..5391071 1 NC_009832.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 5391071 gmk 5602854 gmk Serratia proteamaculans 568 guanylate kinase YP_001481087.1 5390448 D 399741 CDS YP_001481088.1 157373099 5604693 5391126..5391401 1 NC_009832.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 5391401 rpoZ 5604693 rpoZ Serratia proteamaculans 568 DNA-directed RNA polymerase subunit omega YP_001481088.1 5391126 D 399741 CDS YP_001481089.1 157373100 5604694 5391421..5393532 1 NC_009832.1 KEGG: yen:YE0045 guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 5393532 5604694 Spro_4869 Serratia proteamaculans 568 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_001481089.1 5391421 D 399741 CDS YP_001481090.1 157373101 5604695 5393538..5394233 1 NC_009832.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 5394233 5604695 Spro_4870 Serratia proteamaculans 568 tRNA guanosine-2'-O-methyltransferase YP_001481090.1 5393538 D 399741 CDS YP_001481091.1 157373102 5604918 5394230..5396311 1 NC_009832.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 5396311 5604918 Spro_4871 Serratia proteamaculans 568 ATP-dependent DNA helicase RecG YP_001481091.1 5394230 D 399741 CDS YP_001481092.1 157373103 5604919 complement(5396371..5397582) 1 NC_009832.1 PFAM: sodium/glutamate symporter; KEGG: ypi:YpsIP31758_0036 sodium/glutamate symporter; sodium/glutamate symporter 5397582 5604919 Spro_4872 Serratia proteamaculans 568 sodium/glutamate symporter YP_001481092.1 5396371 R 399741 CDS YP_001481093.1 157373104 5604920 5397825..5399225 1 NC_009832.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ypi:YpsIP31758_0034 xanthine permease; uracil-xanthine permease 5399225 5604920 Spro_4873 Serratia proteamaculans 568 uracil-xanthine permease YP_001481093.1 5397825 D 399741 CDS YP_001481094.1 157373105 5603014 5399356..5401017 1 NC_009832.1 PFAM: AsmA family protein; KEGG: yen:YE0040 possible exported protein; AsmA family protein 5401017 5603014 Spro_4874 Serratia proteamaculans 568 AsmA family protein YP_001481094.1 5399356 D 399741 CDS YP_001481095.1 157373106 5603015 5401368..5403311 1 NC_009832.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Carbohydrate-binding family V/XII; KEGG: mxa:MXAN_1967 putative peptidase, S8 (subtilisin) family; carbohydrate-binding family V/XII protein 5403311 5603015 Spro_4875 Serratia proteamaculans 568 carbohydrate-binding family V/XII protein YP_001481095.1 5401368 D 399741 CDS YP_001481096.1 157373107 5603016 complement(5403390..5404334) 1 NC_009832.1 TIGRFAM: thioesterase domain, putative; PFAM: GCN5-related N-acetyltransferase; Thioesterase putative; KEGG: ypi:YpsIP31758_0032 acetyltransferase, GNAT family/thioesterase domain; thioesterase domain-containing protein 5404334 5603016 Spro_4876 Serratia proteamaculans 568 thioesterase domain-containing protein YP_001481096.1 5403390 R 399741 CDS YP_001481097.1 157373108 5602848 complement(5404358..5404795) 1 NC_009832.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 5404795 5602848 Spro_4877 Serratia proteamaculans 568 D-tyrosyl-tRNA(Tyr) deacylase YP_001481097.1 5404358 R 399741 CDS YP_001481098.1 157373109 5602849 complement(5404792..5405682) 1 NC_009832.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 5405682 rbn 5602849 rbn Serratia proteamaculans 568 ribonuclease BN YP_001481098.1 5404792 R 399741 CDS YP_001481099.1 157373110 5602850 complement(5405732..5406322) 1 NC_009832.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: yen:YE0030 hypothetical protein; phosphatase 5406322 5602850 Spro_4879 Serratia proteamaculans 568 phosphatase YP_001481099.1 5405732 R 399741 CDS YP_001481100.1 157373111 5602598 complement(5406487..5408310) 1 NC_009832.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: eca:ECA0030 GTP-binding regulatory protein; GTP-binding protein TypA 5408310 5602598 Spro_4880 Serratia proteamaculans 568 GTP-binding protein TypA YP_001481100.1 5406487 R 399741 CDS YP_001481101.1 157373112 5602599 5408681..5410090 1 NC_009832.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 5410090 glnA 5602599 glnA Serratia proteamaculans 568 glutamine synthetase YP_001481101.1 5408681 D 399741 CDS YP_001481102.1 157373113 5602600 5410275..5411324 1 NC_009832.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 5411324 glnL 5602600 glnL Serratia proteamaculans 568 nitrogen regulation protein NR(II) YP_001481102.1 5410275 D 399741 CDS YP_001481103.1 157373114 5602549 5411333..5412745 1 NC_009832.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 5412745 glnG 5602549 glnG Serratia proteamaculans 568 nitrogen regulation protein NR(I) YP_001481103.1 5411333 D 399741 CDS YP_001481104.1 157373115 5602550 complement(5413029..5414402) 1 NC_009832.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 5414402 5602550 Spro_4884 Serratia proteamaculans 568 coproporphyrinogen III oxidase YP_001481104.1 5413029 R 399741 CDS YP_001481105.1 157373116 5602551 complement(5414585..5415136) 1 NC_009832.1 PFAM: protein of unknown function DUF414; KEGG: yen:YE0023 hypothetical protein; hypothetical protein 5415136 5602551 Spro_4885 Serratia proteamaculans 568 hypothetical protein YP_001481105.1 5414585 R 399741 CDS YP_001481106.1 157373117 5602731 5415885..5416535 1 NC_009832.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 5416535 engB 5602731 engB Serratia proteamaculans 568 ribosome biogenesis GTP-binding protein YsxC YP_001481106.1 5415885 D 399741 CDS YP_001481107.1 157373118 5602732 complement(5417070..5419874) 1 NC_009832.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 5419874 5602732 Spro_4887 Serratia proteamaculans 568 DNA polymerase I YP_001481107.1 5417070 R 399741 CDS YP_001481108.1 157373119 5602733 5420379..5421269 1 NC_009832.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: kpn:KPN_04171 putative endonuclease; putative acyltransferase 5421269 5602733 Spro_4888 Serratia proteamaculans 568 putative acyltransferase YP_001481108.1 5420379 D 399741 CDS YP_001481109.1 157373120 5602664 complement(5421314..5421937) 1 NC_009832.1 PFAM: DSBA oxidoreductase; KEGG: yen:YE0020 secreted thiol:disulfide interchange protein DsbA; periplasmic protein disulfide isomerase I 5421937 5602664 Spro_4889 Serratia proteamaculans 568 periplasmic protein disulfide isomerase I YP_001481109.1 5421314 R 399741 CDS YP_001481110.1 157373121 5602665 complement(5421967..5422953) 1 NC_009832.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 5422953 5602665 Spro_4890 Serratia proteamaculans 568 serine/threonine protein kinase YP_001481110.1 5421967 R 399741 CDS YP_001481111.1 157373122 5602666 complement(5423058..5423327) 1 NC_009832.1 PFAM: protein of unknown function DUF1040; KEGG: yen:YE0018 hypothetical protein; hypothetical protein 5423327 5602666 Spro_4891 Serratia proteamaculans 568 hypothetical protein YP_001481111.1 5423058 R 399741 CDS YP_001481112.1 157373123 5604315 5423480..5424073 1 NC_009832.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 5424073 mobA 5604315 mobA Serratia proteamaculans 568 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001481112.1 5423480 D 399741 CDS YP_001481113.1 157373124 5604316 5424066..5424584 1 NC_009832.1 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein B 5424584 5604316 Spro_4893 Serratia proteamaculans 568 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001481113.1 5424066 D 399741 CDS YP_001481114.1 157373125 5605997 5430299..5430988 1 NC_009832.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: yen:YE0014 putative GntR-family transcriptional regulator; GntR domain-containing protein 5430988 5605997 Spro_4894 Serratia proteamaculans 568 GntR domain-containing protein YP_001481114.1 5430299 D 399741 CDS YP_001481115.1 157373126 5603735 5431051..5432466 1 NC_009832.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: yps:YPTB0010 MFS multidrug:H+ antiporter; EmrB/QacA family drug resistance transporter 5432466 5603735 Spro_4895 Serratia proteamaculans 568 EmrB/QacA family drug resistance transporter YP_001481115.1 5431051 D 399741 CDS YP_001481116.1 157373127 5603736 complement(5432463..5433464) 1 NC_009832.1 DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 5433464 5603736 Spro_4896 Serratia proteamaculans 568 transcriptional repressor RbsR YP_001481116.1 5432463 R 399741 CDS YP_001481117.1 157373128 5603737 complement(5433470..5434426) 1 NC_009832.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 5434426 5603737 Spro_4897 Serratia proteamaculans 568 ribokinase YP_001481117.1 5433470 R 399741 CDS YP_001481118.1 157373129 5603464 complement(5434464..5435354) 1 NC_009832.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 5435354 5603464 Spro_4898 Serratia proteamaculans 568 D-ribose transporter subunit RbsB YP_001481118.1 5434464 R 399741 CDS YP_001481119.1 157373130 5603465 complement(5435376..5436341) 1 NC_009832.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 5436341 rbsC 5603465 rbsC Serratia proteamaculans 568 ribose ABC transporter permease YP_001481119.1 5435376 R 399741 CDS YP_001481120.1 157373131 5603466 complement(5436348..5437853) 1 NC_009832.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP binding protein 5437853 5603466 Spro_4900 Serratia proteamaculans 568 D-ribose transporter ATP binding protein YP_001481120.1 5436348 R 399741 CDS YP_001481121.1 157373132 5603308 complement(5437861..5438280) 1 NC_009832.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 5438280 5603308 Spro_4901 Serratia proteamaculans 568 D-ribose pyranase YP_001481121.1 5437861 R 399741 CDS YP_001481122.1 157373133 5603309 complement(5438471..5440339) 1 NC_009832.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 5440339 trkD 5603309 trkD Serratia proteamaculans 568 potassium transport protein Kup YP_001481122.1 5438471 R 399741 CDS YP_001481123.1 157373134 5603310 5440560..5442131 1 NC_009832.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 5442131 5603310 Spro_4903 Serratia proteamaculans 568 regulatory ATPase RavA YP_001481123.1 5440560 D 399741 CDS YP_001481124.1 157373135 5603666 5442134..5443597 1 NC_009832.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 5443597 yieM 5603666 yieM Serratia proteamaculans 568 hypothetical protein YP_001481124.1 5442134 D 399741 CDS YP_001481125.1 157373136 5603667 complement(5443601..5444593) 1 NC_009832.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 5444593 5603667 Spro_4905 Serratia proteamaculans 568 asparagine synthetase AsnA YP_001481125.1 5443601 R 399741 CDS YP_001481126.1 157373137 5603668 5444749..5445210 1 NC_009832.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 5445210 5603668 Spro_4906 Serratia proteamaculans 568 DNA-binding transcriptional regulator AsnC YP_001481126.1 5444749 D 399741 CDS YP_001481127.1 157373138 5603163 5445308..5445748 1 NC_009832.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 5445748 5603163 Spro_4907 Serratia proteamaculans 568 flavodoxin YP_001481127.1 5445308 D 399741 CDS YP_001481128.1 157373139 5603164 5446130..5448019 1 NC_009832.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5448019 5603164 Spro_4908 Serratia proteamaculans 568 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001481128.1 5446130 D 399741 CDS YP_001481129.1 157373140 5603165 5448157..5448777 1 NC_009832.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5448777 gidB 5603165 gidB Serratia proteamaculans 568 16S rRNA methyltransferase GidB YP_001481129.1 5448157 D 399741 CDS