-- dump date   	20120504_161657
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_001758397.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_001758398.1	KEGG: sse:Ssed_0007 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain
YP_001758399.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_001758400.1	KEGG: sse:Ssed_0009 DNA topoisomerase (ATP-hydrolyzing); TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_001758401.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: sdn:Sden_0005 di-haem cytochrome c peroxidase
YP_001758402.1	KEGG: sdn:Sden_0006 hypothetical protein
YP_001758403.1	PFAM: Na-Ca exchanger/integrin-beta4; LVIVD repeat protein; KEGG: sdn:Sden_0007 Na-Ca exchanger/integrin-beta4
YP_001758404.1	PFAM: LamB/YcsF family protein; KEGG: sse:Ssed_0010 LamB/YcsF family protein
YP_001758405.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: sse:Ssed_0011 UreA amidolyase related protein
YP_001758406.1	PFAM: Allophanate hydrolase subunit 1; KEGG: sse:Ssed_0012 hypothetical protein
YP_001758407.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: sse:Ssed_0013 putative signal transduction protein
YP_001758408.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001758409.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_001758410.1	KEGG: sse:Ssed_0016 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_001758411.1	PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; KEGG: sse:Ssed_0018 amidohydrolase
YP_001758412.1	KEGG: sse:Ssed_0019 hypothetical protein
YP_001758413.1	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs
YP_001758414.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sse:Ssed_0021 YbaK/EbsC protein
YP_001758415.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spl:Spea_0014 GCN5-related N-acetyltransferase
YP_001758416.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001758417.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_001758418.1	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters
YP_001758419.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: sse:Ssed_0025 protein of unknown function UPF0029
YP_001758420.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: sse:Ssed_0026 potassium uptake protein, TrkH family
YP_001758421.1	KEGG: sse:Ssed_0027 protoporphyrinogen oxidase
YP_001758422.1	PFAM: regulatory protein ArsR; KEGG: sse:Ssed_0028 regulatory protein, ArsR
YP_001758423.1	KEGG: sse:Ssed_0029 protoporphyrinogen oxidase
YP_001758424.1	KEGG: hch:HCH_00711 hypothetical protein
YP_001758425.1	KEGG: spl:Spea_3403 hypothetical protein
YP_001758428.1	KEGG: hch:HCH_03721 hypothetical protein
YP_001758429.1	KEGG: vfi:VFA1145 hypothetical protein
YP_001758430.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: sse:Ssed_0031 potassium uptake protein, TrkH family
YP_001758431.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_001758432.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sse:Ssed_0033 sun protein
YP_001758433.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: sse:Ssed_0034 methionyl-tRNA formyltransferase
YP_001758434.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001758435.1	PFAM: Peptidoglycan-binding LysM; KEGG: sse:Ssed_0036 peptidoglycan-binding LysM
YP_001758436.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: sse:Ssed_0037 DNA protecting protein DprA
YP_001758437.1	PFAM: protein of unknown function DUF494; KEGG: sse:Ssed_0038 protein of unknown function DUF494
YP_001758438.1	PFAM: Peptidase M9A collagenase domain protein; KEGG: sse:Ssed_0039 microbial collagenase
YP_001758439.1	PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: sse:Ssed_0040 DNA topoisomerase, type IA, Zn finger domain protein
YP_001758440.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: sse:Ssed_0041 SUA5/YciO/YrdC/YwlC family protein
YP_001758441.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_001758442.1	PFAM: globin; KEGG: spl:Spea_0039 globin
YP_001758443.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: shw:Sputw3181_0032 shikimate 5-dehydrogenase
YP_001758444.1	PFAM: protein of unknown function DUF1488; KEGG: spl:Spea_0041 protein of unknown function DUF1488
YP_001758445.1	KEGG: spl:Spea_0042 carbonic anhydrase, family 3
YP_001758446.1	KEGG: sse:Ssed_0046 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001758447.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_0088 lysophospholipase
YP_001758448.1	PFAM: protein of unknown function DUF885; KEGG: sse:Ssed_0089 protein of unknown function DUF885
YP_001758449.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001758450.1	KEGG: sse:Ssed_0091 hypothetical protein
YP_001758451.1	PFAM: protein of unknown function DUF414; KEGG: sse:Ssed_0092 hypothetical protein
YP_001758452.1	KEGG: sse:Ssed_0093 hypothetical protein
YP_001758453.1	PFAM: cytochrome c class I; KEGG: sse:Ssed_0094 cytochrome c, class I
YP_001758454.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_001758455.1	programmed frameshift; KEGG: spl:Spea_3706 transposase
YP_001758456.1	KEGG: sse:Ssed_0096 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_001758457.1	PFAM: ThiJ/PfpI domain protein; KEGG: sse:Ssed_0097 ThiJ/PfpI domain protein
YP_001758458.1	PFAM: Rhomboid family protein; KEGG: sse:Ssed_0098 rhomboid family protein
YP_001758459.1	PFAM: Rhodanese domain protein; KEGG: sse:Ssed_0099 rhodanese domain protein
YP_001758460.1	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism
YP_001758461.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_001758462.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_0102 transcriptional regulator, TetR family
YP_001758463.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: sse:Ssed_0104 three-deoxy-D-manno-octulosonic-acid transferase domain protein
YP_001758464.1	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position
YP_001758465.1	PFAM: acyltransferase 3; KEGG: psp:PSPPH_5170 acyltransferase family protein
YP_001758466.1	PFAM: glycosyl transferase family 9; KEGG: slo:Shew_3702 glycosyl transferase, family 9
YP_001758467.1	KEGG: pna:Pnap_3188 exopolysaccharide biosynthesis protein-like protein
YP_001758468.1	PFAM: glycosyl transferase family 2; KEGG: slo:Shew_3699 glycosyl transferase, family 2
YP_001758469.1	PFAM: glycosyl transferase family 2; KEGG: sdn:Sden_0205 glycosyl transferase, family 2
YP_001758470.1	PFAM: glycosyl transferase family 2; KEGG: sdn:Sden_0206 glycosyl transferase, family 2
YP_001758471.1	PFAM: glycosyl transferase family 25; KEGG: sdn:Sden_0207 glycosyl transferase, family 25
YP_001758472.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_001758473.1	KEGG: sse:Ssed_0116 hypothetical protein
YP_001758474.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_001758475.1	KEGG: sse:Ssed_0118 hypothetical protein
YP_001758477.1	KEGG: cbe:Cbei_0885 hypothetical protein
YP_001758478.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001758479.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sse:Ssed_0120 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_001758480.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: slo:Shew_3686 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_001758481.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0122 ABC transporter-related protein
YP_001758482.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_0123 binding-protein-dependent transport systems inner membrane component
YP_001758483.1	KEGG: sse:Ssed_0124 extracellular solute-binding protein, family 1
YP_001758484.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sse:Ssed_0125 two component, sigma54 specific, transcriptional regulator, fis family
YP_001758485.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_0126 integral membrane sensor signal transduction histidine kinase
YP_001758486.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0127 acetyltransferase, GNAT family
YP_001758487.1	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: sse:Ssed_0128 hypothetical protein
YP_001758488.1	KEGG: sse:Ssed_0129 hypothetical protein
YP_001758489.1	TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: sse:Ssed_0130 isochorismate synthase
YP_001758490.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_4088 TonB-dependent receptor
YP_001758491.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0132 ABC transporter related
YP_001758492.1	PFAM: cobalt transport protein; KEGG: sse:Ssed_0133 cobalt transport protein
YP_001758493.1	KEGG: sse:Ssed_0134 hypothetical protein
YP_001758494.1	KEGG: sse:Ssed_0135 hypothetical protein
YP_001758495.1	KEGG: sse:Ssed_0136 hypothetical protein
YP_001758496.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_0137 HD domain protein
YP_001758497.1	PFAM: Paraquat-inducible protein A; KEGG: sse:Ssed_0138 paraquat-inducible protein A
YP_001758498.1	PFAM: ThiJ/PfpI domain protein; KEGG: sse:Ssed_0140 ThiJ/PfpI domain protein
YP_001758500.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_0141 hypothetical protein
YP_001758501.1	catalyzes the formation of pyruvate from 2,3-diaminopropionate
YP_001758502.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: spl:Spea_4079 putative endoribonuclease L-PSP
YP_001758503.1	PFAM: YheO domain protein; KEGG: spl:Spea_4078 YheO domain protein
YP_001758504.1	PFAM: creatinase; peptidase M24; KEGG: spl:Spea_4077 peptidase M24
YP_001758505.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: spl:Spea_4076 Asp/Glu racemase
YP_001758506.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: spl:Spea_4075 protein of unknown function DUF6 transmembrane
YP_001758507.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: spl:Spea_0499 protein of unknown function DUF6 transmembrane
YP_001758508.1	KEGG: spl:Spea_4074 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20
YP_001758509.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: spl:Spea_4072 NADH:flavin oxidoreductase/NADH oxidase
YP_001758510.1	KEGG: sbl:Sbal_1527 hypothetical protein
YP_001758511.1	PFAM: PKD domain containing protein; peptidase domain protein; KEGG: hau:Haur_0489 lysyl endopeptidase
YP_001758512.1	KEGG: slo:Shew_2460 hypothetical protein
YP_001758513.1	PFAM: MORN variant repeat protein; KEGG: slo:Shew_2461 MORN variant repeat protein
YP_001758514.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pin:Ping_2106 short-chain dehydrogenase/reductase SDR
YP_001758515.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cps:CPS_2528 enoyl-CoA hydratase/isomerase family protein
YP_001758516.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_2531 transcriptional regulator, LysR family
YP_001758517.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_001758518.1	KEGG: sse:Ssed_0143 hypothetical protein
YP_001758519.1	KEGG: sse:Ssed_0144 hypothetical protein
YP_001758520.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sse:Ssed_0145 oligopeptidase A
YP_001758521.1	PFAM: monooxygenase FAD-binding; KEGG: bme:BMEI1017 salicylate hydroxylase
YP_001758522.1	KEGG: sse:Ssed_0147 hypothetical protein
YP_001758523.1	PFAM: Glutathione S-transferase domain; KEGG: sse:Ssed_0148 glutathione S-transferase, N-terminal domain
YP_001758524.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0149 transcriptional regulator, LyrR family
YP_001758525.1	KEGG: sse:Ssed_0150 conserved hypothetical 3-methyladenine DNA glycosylase
YP_001758526.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_0151 hypothetical protein
YP_001758527.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_0031 efflux transporter, RND family, MFP subunit
YP_001758528.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO_4692 AcrB/AcrD/AcrF family protein
YP_001758530.1	PFAM: AbgT putative transporter; KEGG: sse:Ssed_0156 AbgT putative transporter
YP_001758531.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: fjo:Fjoh_2491 response regulator receiver protein
YP_001758532.1	PFAM: peptidase S45 penicillin amidase; KEGG: mxa:MXAN_2906 penicillin acylase family protein
YP_001758533.1	PFAM: LemA family protein; KEGG: sse:Ssed_0157 LemA family protein
YP_001758534.1	KEGG: sse:Ssed_0158 hypothetical protein
YP_001758535.1	PFAM: Lytic transglycosylase catalytic; KEGG: slo:Shew_3650 lytic transglycosylase, catalytic
YP_001758536.1	sodium/drug antiporter; functions as a Na(+)-driven Na(+)/drug antiporter; member of multidrug and toxic compound extrusion (MATE) family; extrudes acriflavines and other compounds by utilizing the sodium gradient
YP_001758537.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0161 conserved hypothetical transcriptional regulator
YP_001758538.1	KEGG: sse:Ssed_0162 hypothetical protein
YP_001758539.1	PFAM: protein of unknown function DUF519; KEGG: sse:Ssed_0163 protein of unknown function DUF519
YP_001758540.1	PFAM: protein of unknown function DUF548; KEGG: spl:Spea_4047 protein of unknown function DUF548
YP_001758541.1	KEGG: sse:Ssed_0165 hypothetical protein
YP_001758542.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_1680 metal dependent phosphohydrolase
YP_001758543.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shn:Shewana3_4020 redoxin domain protein
YP_001758544.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbn:Sbal195_4340 methyl-accepting chemotaxis sensory transducer
YP_001758545.1	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR
YP_001758546.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_001758547.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sse:Ssed_0170 transcription elongation factor GreB
YP_001758548.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: amr:AM1_2010 methyltransferase, UbiE/COQ5 family, putative
YP_001758549.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sse:Ssed_0173 RNA binding S1 domain protein
YP_001758550.1	PFAM: sulfatase; KEGG: sse:Ssed_0174 sulfatase
YP_001758551.1	KEGG: sse:Ssed_0175 hypothetical protein
YP_001758552.1	KEGG: sse:Ssed_0176 carboxylesterase; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold
YP_001758553.1	KEGG: sse:Ssed_0177 competence protein ComF
YP_001758554.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: sse:Ssed_0178 peptidase M14, carboxypeptidase A
YP_001758555.1	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source
YP_001758556.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sse:Ssed_0180 MATE efflux family protein
YP_001758557.1	PFAM: polysaccharide deacetylase; KEGG: sse:Ssed_0181 polysaccharide deacetylase
YP_001758558.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: sse:Ssed_0182 protein-glutamate methylesterase
YP_001758559.1	PFAM: MCP methyltransferase CheR-type; KEGG: sse:Ssed_0183 protein-glutamate O-methyltransferase
YP_001758560.1	PFAM: chemotaxis sensory transducer; KEGG: sse:Ssed_0184 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor
YP_001758561.1	PFAM: CheW domain protein; KEGG: sse:Ssed_0185 CheW protein
YP_001758562.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sse:Ssed_0186 CheA signal transduction histidine kinase
YP_001758563.1	PFAM: response regulator receiver; KEGG: saz:Sama_3494 response regulator receiver protein
YP_001758564.1	KEGG: sse:Ssed_0188 hypothetical protein
YP_001758565.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: sse:Ssed_0189 electron transport protein SCO1/SenC
YP_001758566.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001758567.1	PFAM: cytochrome oxidase assembly; KEGG: sse:Ssed_0191 cytochrome oxidase assembly
YP_001758568.1	KEGG: sse:Ssed_0192 hypothetical protein
YP_001758569.1	KEGG: sse:Ssed_0193 hypothetical protein
YP_001758570.1	KEGG: saz:Sama_3487 hypothetical protein
YP_001758571.1	PFAM: cytochrome c oxidase subunit III; KEGG: sse:Ssed_0195 cytochrome c oxidase, subunit III
YP_001758572.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_001758573.1	KEGG: sse:Ssed_0197 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001758574.1	KEGG: sse:Ssed_0198 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region
YP_001758575.1	KEGG: sse:Ssed_0199 hypothetical protein
YP_001758576.1	Represses a number of genes involved in the response to DNA damage
YP_001758577.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_001758578.1	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sse:Ssed_0202 aromatic amino acid transporter
YP_001758579.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_0203 conserved hypothetical AraC-type transcriptional regulator
YP_001758580.1	KEGG: sse:Ssed_0204 putative permease of the major facilitator superfamily
YP_001758581.1	KEGG: sse:Ssed_0205 putative multidrug resistance efflux pump
YP_001758582.1	TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; KEGG: spl:Spea_3267 diguanylate cyclase
YP_001758583.1	KEGG: sse:Ssed_0207 globin
YP_001758584.1	KEGG: sse:Ssed_0208 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001758585.1	TIGRFAM: heavy metal efflux pump, CzcA family; KEGG: sse:Ssed_0210 heavy metal efflux pump, CzcA family
YP_001758586.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sse:Ssed_0211 membrane-fusion protein-like protein
YP_001758587.1	KEGG: sse:Ssed_0212 hypothetical protein
YP_001758588.1	KEGG: sse:Ssed_0213 hypothetical protein
YP_001758589.1	KEGG: sse:Ssed_0214 hypothetical protein
YP_001758590.1	KEGG: sse:Ssed_0215 hypothetical protein
YP_001758591.1	PFAM: NapC/NirT cytochrome c domain protein; KEGG: spl:Spea_3983 NapC/NirT cytochrome c domain protein
YP_001758592.1	PFAM: protein of unknown function DUF1568; KEGG: sse:Ssed_1948 protein of unknown function DUF1568
YP_001758594.1	TIGRFAM: YD repeat protein; PFAM: Fibronectin type III domain protein; YD repeat-containing protein; FG-GAP repeat protein; KEGG: shm:Shewmr7_1180 YD repeat protein
YP_001758595.1	PFAM: protein of unknown function DUF1145; KEGG: sbm:Shew185_4166 protein of unknown function DUF1145
YP_001758596.1	TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: sse:Ssed_0218 putative methyltransferase
YP_001758597.1	KEGG: sse:Ssed_0219 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_001758598.1	KEGG: sse:Ssed_0220 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001758599.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_0221 protein of unknown function DUF214
YP_001758600.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_001758602.1	TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_0223 O-succinylbenzoate-CoA ligase
YP_001758603.1	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate
YP_001758604.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_0225 alpha/beta hydrolase fold
YP_001758605.1	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis
YP_001758606.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_0986 helix-turn-helix-domain containing protein, AraC type
YP_001758607.1	KEGG: psb:Psyr_0006 putative phenylacetaldoxime dehydratase
YP_001758608.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: psb:Psyr_0007 aliphatic nitrilase
YP_001758609.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_0989 TonB-dependent receptor
YP_001758610.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mlo:mll4199 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
YP_001758611.1	PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: pat:Patl_2708 ethyl tert-butyl ether degradation EthD
YP_001758612.1	PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: pen:PSEEN2789 transcriptional repressor for phenylacetic acid degradation
YP_001758613.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Ferric reductase NAD binding; KEGG: mmw:Mmwyl1_3091 phenylacetate-CoA oxygenase/reductase, PaaK subunit
YP_001758614.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: reh:H16_B1360 phenylacetic acid degradation protein D
YP_001758615.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: bbt:BBta_2867 phenylacetic acid degradation protein PaaC
YP_001758616.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
YP_001758617.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_001758618.1	KEGG: pla:Plav_2698 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase
YP_001758619.1	PFAM: thioesterase superfamily protein; KEGG: dac:Daci_0569 phenylacetic acid degradation protein PaaD
YP_001758620.1	TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_3078 phenylacetate degradation probable enoyl-CoA hydratase PaaB
YP_001758621.1	KEGG: mmw:Mmwyl1_3102 regulatory PhaM protein
YP_001758622.1	catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA
YP_001758623.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: azo:azo0303 phenylacetate--CoA ligase
YP_001758624.1	PFAM: regulatory protein LuxR; KEGG: bja:bll6414 transcriptional regulatory protein
YP_001758625.1	PFAM: Amidase; KEGG: bpa:BPP3587 indole acetimide hydrolase
YP_001758626.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3904 TonB-dependent receptor
YP_001758627.1	TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: sse:Ssed_0227 cytochrome c family protein
YP_001758628.1	KEGG: sse:Ssed_0228 outer membrane protein
YP_001758629.1	TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_0229 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family
YP_001758630.1	TIGRFAM: dimethylsulfoxide reductase, chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_0230 anaerobic dimethyl sulfoxide reductase, B subunit
YP_001758631.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: sse:Ssed_0231 cytoplasmic chaperone TorD family protein
YP_001758632.1	KEGG: sse:Ssed_0232 hypothetical protein
YP_001758633.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_3970 transcriptional regulator, LysR family
YP_001758634.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_3969 transcriptional regulator, LysR family
YP_001758635.1	KEGG: spl:Spea_3968 conserved hypothetical protein
YP_001758636.1	KEGG: spl:Spea_3967 formate-dependent nitrite reductase
YP_001758637.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spl:Spea_3966 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001758638.1	TIGRFAM: cytochrome c nitrite reductase, NrfD subunit; PFAM: Polysulphide reductase NrfD; KEGG: spl:Spea_3965 polysulphide reductase NrfD
YP_001758639.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: slo:Shew_3598 transcriptional regulator, AsnC family
YP_001758640.1	uncharacterized member of the APC superfamily of amino acid transporters; unknown function
YP_001758641.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: shn:Shewana3_3957 TonB family protein
YP_001758642.1	PFAM: protein of unknown function DUF1332; KEGG: sse:Ssed_0247 protein of unknown function DUF1332
YP_001758643.1	KEGG: sse:Ssed_0248 hypothetical protein
YP_001758644.1	KEGG: sse:Ssed_0249 hypothetical protein
YP_001758645.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: sse:Ssed_0250 Sel1 domain protein repeat-containing protein
YP_001758646.1	KEGG: sse:Ssed_0251 hypothetical protein
YP_001758647.1	KEGG: sse:Ssed_0252 hypothetical protein
YP_001758648.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: aha:AHA_3367 methyl-accepting chemotaxis protein
YP_001758649.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0253 transcriptional regulator, LysR family
YP_001758650.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0254 drug resistance transporter, Bcr/CflA subfamily
YP_001758651.1	PFAM: DTW domain containing protein; KEGG: sse:Ssed_0256 DTW domain containing protein
YP_001758652.1	KEGG: sse:Ssed_0257 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001758653.1	KEGG: sse:Ssed_0258 hypothetical protein
YP_001758654.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_0259 methyltransferase type 12
YP_001758655.1	KEGG: shm:Shewmr7_3816 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001758656.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_0261 peptidase M16 domain protein
YP_001758657.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_0262 peptidase M16 domain protein
YP_001758658.1	KEGG: sse:Ssed_0263 hypothetical protein
YP_001758659.1	KEGG: sse:Ssed_0264 hypothetical protein
YP_001758660.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sse:Ssed_0265 RNA methyltransferase, TrmH family, group 2
YP_001758661.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_3945 transcriptional regulator, LysR family
YP_001758662.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ddi:DDBDRAFT_0205288 hypothetical protein
YP_001758666.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: spl:Spea_3944 radical SAM domain protein
YP_001758667.1	KEGG: spl:Spea_3943 conserved hypothetical protein
YP_001758668.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sse:Ssed_0271 alcohol dehydrogenase GroES domain protein
YP_001758669.1	KEGG: sdn:Sden_1129 hypothetical protein
YP_001758670.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0272 transcriptional regulator, LysR family
YP_001758671.1	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: spl:Spea_3939 flavocytochrome c
YP_001758672.1	KEGG: spl:Spea_3938 tetraheme cytochrome c
YP_001758673.1	KEGG: spl:Spea_3937 conserved hypothetical protein
YP_001758674.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_3936 transcriptional regulator, LysR family
YP_001758675.1	KEGG: sbn:Sbal195_0259 putative transcriptional regulator, TetR family
YP_001758676.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_0278 integral membrane sensor signal transduction histidine kinase
YP_001758677.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_0279 two component transcriptional regulator, winged helix family
YP_001758678.1	PFAM: protein of unknown function Spy-related; KEGG: sse:Ssed_0280 protein of unknown function, Spy-related
YP_001758679.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sse:Ssed_0281 cation diffusion facilitator family transporter
YP_001758680.1	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate
YP_001758681.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_001758682.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_001758683.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_001758684.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sfr:Sfri_0484 periplasmic sensor signal transduction histidine kinase
YP_001758685.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sfr:Sfri_0485 two component transcriptional regulator, winged helix family protein
YP_001758686.1	KEGG: shm:Shewmr7_0668 hypothetical protein
YP_001758687.1	KEGG: slo:Shew_3417 hypothetical protein
YP_001758688.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: sse:Ssed_0441 sensory box protein
YP_001758689.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: son:SO_0438 short chain dehydrogenase
YP_001758690.1	KEGG: spl:Spea_0430 conserved hypothetical protein
YP_001758691.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_001758692.1	involved in de novo purine biosynthesis
YP_001758693.1	mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators
YP_001758694.1	PFAM: permease; KEGG: sse:Ssed_0446 permease
YP_001758695.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: sfr:Sfri_3789 mutator MutT protein
YP_001758696.1	PFAM: protein of unknown function DUF329; KEGG: slo:Shew_3443 protein of unknown function DUF329
YP_001758697.1	PFAM: protein of unknown function DUF1342; KEGG: sse:Ssed_0421 protein of unknown function DUF1342
YP_001758698.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_001758699.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: sse:Ssed_0423 prepilin peptidase
YP_001758700.1	PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: gme:Gmet_0675 type III restriction enzyme, res subunit
YP_001758701.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: pen:PSEEN0753 adenine specific DNA methylase
YP_001758702.1	KEGG: sbn:Sbal195_0587 AAA ATPase
YP_001758703.1	KEGG: shn:Shewana3_2918 hypothetical protein
YP_001758704.1	KEGG: vpa:VP2907 hypothetical protein
YP_001758705.1	KEGG: vpa:VP2908 hypothetical protein
YP_001758706.1	PFAM: integrase family protein; KEGG: vpa:VP2909 hypothetical protein
YP_001758707.1	PFAM: integrase family protein; KEGG: vpa:VP2910 hypothetical protein
YP_001758708.1	PFAM: type II secretion system protein; KEGG: sbn:Sbal195_4061 type II secretion system protein
YP_001758709.1	TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sse:Ssed_0425 type IV-A pilus assembly ATPase PilB
YP_001758710.1	KEGG: sdn:Sden_3388 methylation
YP_001758711.1	KEGG: sse:Ssed_0427 nicotinate-nucleotide diphosphorylase (carboxylating); TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_001758712.1	PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: slo:Shew_3434 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
YP_001758713.1	involved in regulation of beta-lactamase; putative signaling protein
YP_001758714.1	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex
YP_001758715.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_001758716.1	E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains
YP_001758717.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_001758718.1	KEGG: sse:Ssed_0434 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_001758719.1	PFAM: Patatin; surface antigen variable number repeat protein; KEGG: sse:Ssed_0435 patatin
YP_001758720.1	PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sse:Ssed_0436 endothelin-converting enzyme 1
YP_001758721.1	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: sse:Ssed_4280 competence/damage-inducible protein CinA
YP_001758722.1	PFAM: protein of unknown function DUF1439; KEGG: sse:Ssed_4279 protein of unknown function DUF1439
YP_001758723.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_001758724.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis
YP_001758725.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_001758726.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_001758727.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_001758728.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_001758729.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_001758730.1	KEGG: sse:Ssed_4271 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001758731.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: sse:Ssed_4270 type IV pilus assembly protein PilM
YP_001758732.1	PFAM: Fimbrial assembly family protein; KEGG: sse:Ssed_4269 fimbrial assembly family protein
YP_001758733.1	PFAM: Pilus assembly protein PilO; KEGG: sse:Ssed_4268 pilus assembly protein, PilO
YP_001758734.1	PFAM: Pilus assembly protein PilP; KEGG: sse:Ssed_4267 methyl-accepting chemotaxis sensory transducer
YP_001758735.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: sse:Ssed_4266 type IV pilus secretin PilQ
YP_001758736.1	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_001758737.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_001758738.1	PFAM: Sporulation domain protein; KEGG: sse:Ssed_4263 sporulation domain protein
YP_001758739.1	KEGG: sse:Ssed_4262 site-specific DNA-methyltransferase (adenine-specific); TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_001758740.1	KEGG: spl:Spea_0242 conserved hypothetical protein
YP_001758741.1	KEGG: sse:Ssed_4260 hypothetical protein
YP_001758742.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: sse:Ssed_4259 ribulose-phosphate 3-epimerase
YP_001758743.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_4258 phosphoglycolate phosphatase
YP_001758744.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001758745.1	PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sse:Ssed_4254 transport-associated
YP_001758746.1	TIGRFAM: phosphoheptose isomerase; KEGG: sse:Ssed_4253 phosphoheptose isomerase
YP_001758747.1	PFAM: protein of unknown function UPF0102; KEGG: sse:Ssed_4252 protein of unknown function UPF0102
YP_001758748.1	PFAM: LppC family lipoprotein; KEGG: sse:Ssed_4251 LppC family lipoprotein
YP_001758749.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sse:Ssed_4250 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_001758753.1	KEGG: son:SO_1424 hypothetical protein
YP_001758754.1	KEGG: she:Shewmr4_2787 hypothetical protein
YP_001758755.1	KEGG: spl:Spea_0134 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001758756.1	PFAM: helix-turn-helix- domain containing protein AraC type; PAS fold-4 domain protein; KEGG: pat:Patl_1157 transcriptional regulator, AraC family
YP_001758757.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sde:Sde_1708 oxidoreductase, Gfo/Idh/MocA family
YP_001758758.1	PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: sde:Sde_1707 hypothetical protein
YP_001758759.1	PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_1706 conserved hypothetical protein-signal peptide and transmembrane prediction
YP_001758760.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cps:CPS_3701 hypothetical protein
YP_001758761.1	PFAM: protein of unknown function DUF1080; KEGG: pdi:BDI_1827 hypothetical protein
YP_001758762.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: sus:Acid_7382 glucose-methanol-choline oxidoreductase
YP_001758763.1	KEGG: sru:SRU_2528 Tat (twin-arginine translocation) pathway signal sequence domain protein
YP_001758764.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_4234 NADH dehydrogenase
YP_001758765.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbn:Sbal195_0574 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001758766.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_4232 carbonate dehydratase
YP_001758767.1	catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione
YP_001758768.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: sfr:Sfri_3428 transcriptional regulators, TraR/DksA family protein
YP_001758769.1	TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sse:Ssed_4227 alcohol dehydrogenase GroES domain protein
YP_001758770.1	KEGG: sfr:Sfri_3426 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase
YP_001758771.1	PFAM: small multidrug resistance protein; KEGG: sfr:Sfri_3425 small multidrug resistance protein
YP_001758772.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_4223 short chain dehydrogenase/reductase family protein
YP_001758773.1	KEGG: sse:Ssed_4221 hypothetical protein
YP_001758774.1	PFAM: protein of unknown function DUF1212; KEGG: sse:Ssed_4220 protein of unknown function DUF1212
YP_001758775.1	KEGG: sse:Ssed_4219 hypothetical protein
YP_001758776.1	PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sse:Ssed_4218 radical SAM N-terminal domain protein
YP_001758777.1	PFAM: protein of unknown function DUF1232; KEGG: slo:Shew_0234 protein of unknown function DUF1232
YP_001758778.1	PFAM: isochorismatase hydrolase; KEGG: cps:CPS_0771 isochorismatase family protein
YP_001758779.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_0770 transcriptional regulator, LysR family
YP_001758780.1	KEGG: spl:Spea_0282 conserved hypothetical protein
YP_001758781.1	KEGG: sbn:Sbal195_2239 hypothetical protein
YP_001758782.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pat:Patl_3756 transposase IS116/IS110/IS902
YP_001758783.1	KEGG: fps:FP2158 hypothetical protein
YP_001758784.1	KEGG: fjo:Fjoh_3680 hypothetical protein
YP_001758785.1	KEGG: ppr:PBPRB0547 hypothetical protein
YP_001758786.1	KEGG: sse:Ssed_4205 hypothetical protein
YP_001758787.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: spl:Spea_0284 peptidase S9 prolyl oligopeptidase active site domain protein
YP_001758788.1	KEGG: sse:Ssed_4200 hypothetical protein
YP_001758789.1	KEGG: spl:Spea_0303 conserved hypothetical protein
YP_001758790.1	KEGG: sse:Ssed_4197 hypothetical protein
YP_001758791.1	KEGG: sse:Ssed_4196 hypothetical protein
YP_001758792.1	KEGG: sse:Ssed_4195 hypothetical protein
YP_001758793.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_001758794.1	PFAM: DSBA oxidoreductase; KEGG: sse:Ssed_4193 DsbA oxidoreductase
YP_001758795.1	PFAM: protein of unknown function DUF1107; KEGG: sse:Ssed_4192 protein of unknown function DUF1107
YP_001758796.1	PFAM: protein of unknown function DUF904; KEGG: sse:Ssed_4191 protein of unknown function DUF904
YP_001758797.1	PFAM: protein of unknown function DUF1223; KEGG: shm:Shewmr7_0309 protein of unknown function DUF1223
YP_001758798.1	KEGG: slo:Shew_0270 hypothetical protein
YP_001758799.1	KEGG: sse:Ssed_4189 hypothetical protein
YP_001758800.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001758801.1	KEGG: slo:Shew_0279 hypothetical protein
YP_001758802.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: sse:Ssed_4174 phospholipid/glycerol acyltransferase
YP_001758803.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: sse:Ssed_4173 phospholipid/glycerol acyltransferase
YP_001758804.1	KEGG: sse:Ssed_4171 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001758805.1	KEGG: ilo:IL0645 predicted membrane protein
YP_001758807.1	PFAM: KAP P-loop domain protein; KEGG: spl:Spea_0333 kap P-loop domain protein
YP_001758808.1	KEGG: hch:HCH_05630 hypothetical protein
YP_001758809.1	KEGG: sse:Ssed_4171 Mg chelatase, subunit ChlI
YP_001758810.1	KEGG: vfi:VF1097 BAX protein
YP_001758811.1	PFAM: Radical SAM domain protein; KEGG: shn:Shewana3_3560 radical SAM domain protein
YP_001758812.1	PFAM: sulfatase; KEGG: vvy:VVA0661 arylsulfatase A
YP_001758813.1	KEGG: mkm:Mkms_2796 hypothetical protein
YP_001758814.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: reu:Reut_B3849 helix-turn-helix, fis-type
YP_001758815.1	KEGG: spl:Spea_3268 BAX protein
YP_001758816.1	KEGG: saz:Sama_1180 hypothetical protein
YP_001758817.1	PFAM: Glutathione S-transferase domain; KEGG: shn:Shewana3_0013 glutathione S-transferase, N-terminal domain protein
YP_001758818.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: she:Shewmr4_0006 transcriptional regulator, LysR family
YP_001758819.1	KEGG: mgm:Mmc1_0444 DsbA oxidoreductase
YP_001758820.1	PFAM: peptidase domain protein; KEGG: pha:PSHAa2649 serine protease precursor
YP_001758821.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: abo:ABO_1250 transcriptional regulator, AraC family
YP_001758822.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_001758823.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: shw:Sputw3181_0092 cytochrome c oxidase subunit IV
YP_001758824.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: sfr:Sfri_0222 cytochrome c oxidase, subunit III
YP_001758825.1	KEGG: shm:Shewmr7_3915 cytochrome-c oxidase; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_001758826.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: shn:Shewana3_4031 ubiquinol oxidase, subunit II
YP_001758827.1	KEGG: shw:Sputw3181_0096 hypothetical protein
YP_001758828.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: reh:H16_A1912 MIP-(macrophage infectivity potentiator)-like protein
YP_001758829.1	KEGG: cps:CPS_4903 hypothetical protein
YP_001758830.1	PFAM: Modulator of Rho-dependent transcription termination; KEGG: vvy:VVA1468 hypothetical protein
YP_001758831.1	KEGG: sse:Ssed_4170 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_001758832.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_4169 diguanylate cyclase
YP_001758833.1	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate
YP_001758834.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_001758835.1	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit
YP_001758836.1	PFAM: amino acid-binding ACT domain protein; KEGG: sse:Ssed_4164 acetolactate synthase small subunit
YP_001758837.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_001758838.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_001758839.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_001758840.1	PFAM: aminotransferase class V; KEGG: sse:Ssed_4160 serine--pyruvate transaminase
YP_001758841.1	KEGG: she:Shewmr4_0503 hypothetical protein
YP_001758842.1	KEGG: slo:Shew_0298 Zn-dependent hydrolase of the beta-lactamase fold
YP_001758843.1	PFAM: regulatory protein TetR; KEGG: slo:Shew_0299 transcriptional regulator, TetR family
YP_001758844.1	PFAM: protein of unknown function DUF1566; KEGG: shw:Sputw3181_0674 protein of unknown function DUF1566
YP_001758845.1	TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_4157 TonB-dependent copper receptor
YP_001758846.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: sse:Ssed_3757 oxidoreductase, 2OG-Fe(II) oxygenase family
YP_001758847.1	KEGG: fjo:Fjoh_4877 AAA ATPase
YP_001758848.1	KEGG: dps:DP2995 hypothetical protein
YP_001758849.1	PFAM: peptidase M48 Ste24p; KEGG: hch:HCH_01586 putative Zn-dependent protease, contains TPR repeats
YP_001758850.1	PFAM: protein of unknown function DUF124; KEGG: hch:HCH_01585 hypothetical protein
YP_001758851.1	PFAM: protein of unknown function DUF124; KEGG: hch:HCH_01584 hypothetical protein
YP_001758852.1	PFAM: protein of unknown function DUF124; KEGG: hch:HCH_01583 hypothetical protein
YP_001758853.1	PFAM: sodium:neurotransmitter symporter; KEGG: sse:Ssed_4156 sodium:neurotransmitter symporter
YP_001758854.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: sse:Ssed_4155 transcriptional regulator, AsnC family
YP_001758855.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: sse:Ssed_4154 phosphoesterase, PA-phosphatase related
YP_001758856.1	PFAM: Inner membrane CreD family protein; KEGG: sse:Ssed_4153 inner membrane protein, putative
YP_001758857.1	PFAM: protein of unknown function DUF526; KEGG: sse:Ssed_4151 protein of unknown function DUF526
YP_001758858.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_4150 acriflavin resistance protein
YP_001758859.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_4149 efflux transporter, RND family, MFP subunit
YP_001758860.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_4148 transcriptional regulator, TetR family
YP_001758861.1	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: sse:Ssed_4147 ATP-dependent DNA helicase Rep
YP_001758862.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sse:Ssed_4146 diguanylate cyclase/phosphodiesterase with GAF sensor
YP_001758863.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001758864.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_4145 diguanylate cyclase/phosphodiesterase
YP_001758865.1	KEGG: sse:Ssed_4144 hypothetical protein
YP_001758866.1	PFAM: OmpA/MotB domain protein; KEGG: sse:Ssed_4143 OmpA/MotB domain protein
YP_001758867.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: sse:Ssed_4142 type I secretion outer membrane protein, TolC family
YP_001758868.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_4141 type I secretion membrane fusion protein, HlyD family
YP_001758869.1	KEGG: sse:Ssed_4140 ABC transporter-related protein; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001758870.1	TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; transferase hexapeptide repeat containing protein; Two component regulator propeller; KEGG: saz:Sama_3258 putative outer membrane adhesin like protein
YP_001758871.1	KEGG: sdn:Sden_0384 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; SMART: Cadherin
YP_001758872.1	KEGG: plt:Plut_0676 VCBS; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; SMART: Cadherin
YP_001758873.1	PFAM: HemY domain protein; KEGG: sse:Ssed_4136 HemY domain protein
YP_001758874.1	PFAM: protein of unknown function DUF513 hemX; KEGG: sse:Ssed_4135 protein of unknown function DUF513, HemX
YP_001758875.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: sse:Ssed_4134 uroporphyrinogen III synthase HEM4
YP_001758876.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_001758877.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_001758878.1	TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: sse:Ssed_4131 frataxin family protein
YP_001758879.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sse:Ssed_4130 diaminopimelate decarboxylase
YP_001758880.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_001758881.1	PFAM: protein of unknown function DUF484; KEGG: sse:Ssed_4128 protein of unknown function DUF484
YP_001758882.1	TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sse:Ssed_4127 tyrosine recombinase XerC
YP_001758883.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: spl:Spea_0381 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001758884.1	TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; Cadherin; Na-Ca exchanger/integrin-beta4; KEGG: sbn:Sbal195_4098 outer membrane adhesin like proteiin
YP_001758885.1	PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: sse:Ssed_4124 protein of unknown function DUF542, ScdA domain protein
YP_001758886.1	PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: sfr:Sfri_0451 Kelch repeat protein
YP_001758887.1	KEGG: spe:Spro_4310 helix-turn-helix domain protein
YP_001758888.1	PFAM: HipA domain protein; KEGG: spe:Spro_4311 HipA domain protein
YP_001758889.1	PFAM: helix-turn-helix domain protein; KEGG: spl:Spea_3847 helix-turn-helix domain protein
YP_001758890.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: spl:Spea_3846 HipA domain protein
YP_001758891.1	KEGG: sec:SC171 hypothetical protein
YP_001758892.1	KEGG: sec:SC170 hypothetical protein
YP_001758893.1	PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit
YP_001758894.1	PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: sbm:Shew185_1977 N-6 DNA methylase
YP_001758895.1	PFAM: type III restriction protein res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: sdn:Sden_1234 type III restriction enzyme, res subunit
YP_001758896.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_001758897.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: sse:Ssed_4118 putative TIM-barrel protein, nifR3 family
YP_001758898.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_001758899.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit
YP_001758900.1	PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sse:Ssed_4115 fumarate reductase respiratory complex, transmembrane subunit
YP_001758901.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_001758902.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_001758903.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_4112 transcriptional regulator, LysR family
YP_001758904.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_001758905.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sse:Ssed_4110 thioredoxin
YP_001758906.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_001758907.1	PFAM: Ppx/GppA phosphatase; KEGG: sse:Ssed_4108 guanosine-5'-triphosphate,3'-diphosphate diphosphatase
YP_001758908.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_0341 TonB-dependent receptor
YP_001758909.1	KEGG: sse:Ssed_4106 hypothetical protein
YP_001758910.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_001758911.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: sse:Ssed_4104 diguanylate cyclase
YP_001758912.1	PFAM: TatD-related deoxyribonuclease; KEGG: sse:Ssed_4103 TatD-related deoxyribonuclease
YP_001758913.1	KEGG: sse:Ssed_4102 hypothetical protein
YP_001758914.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: sse:Ssed_4101 sec-independent protein translocase, TatC subunit
YP_001758915.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: sse:Ssed_4100 twin-arginine translocation protein, TatB subunit
YP_001758916.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: slo:Shew_3376 twin-arginine translocation protein, TatA/E family subunit
YP_001758917.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: sse:Ssed_4098 2-polyprenylphenol 6-hydroxylase
YP_001758918.1	PFAM: Sterol-binding domain protein; KEGG: sse:Ssed_4097 protein of unknown function DUF1243
YP_001758919.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_4096 ubiquinone/menaquinone biosynthesis methyltransferase
YP_001758920.1	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sse:Ssed_4095 arginase/agmatinase/formiminoglutamase
YP_001758921.1	PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sbl:Sbal_0143 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001758922.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_001758923.1	KEGG: sse:Ssed_4093 hypothetical protein
YP_001758924.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: sbn:Sbal195_0435 phosphoesterase PA-phosphatase related
YP_001758925.1	KEGG: spc:Sputcn32_0511 hypothetical protein
YP_001758926.1	KEGG: mmw:Mmwyl1_2681 hypothetical protein
YP_001758928.1	PFAM: histidine kinase HAMP region domain protein; SMART: extracellular solute-binding protein family 3; metal-dependent phosphohydrolase HD region; KEGG: spl:Spea_3667 metal dependent phosphohydrolase
YP_001758929.1	SMART: extracellular solute-binding protein family 3; metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_0651 metal dependent phosphohydrolase
YP_001758930.1	PFAM: histidine kinase HAMP region domain protein; SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_0651 metal dependent phosphohydrolase
YP_001758931.1	KEGG: noc:Noc_0114 di-haem cytochrome c peroxidase
YP_001758932.1	KEGG: sse:Ssed_0660 hypothetical protein
YP_001758933.1	KEGG: sse:Ssed_0661 hypothetical protein
YP_001758934.1	PFAM: Endonuclease I; KEGG: xcv:XCV0569 putative extracellular ribonuclease
YP_001758935.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sse:Ssed_4090 acetyl CoA carboxylase, biotin carboxylase subunit
YP_001758936.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sse:Ssed_4089 acetylCoA carboxylase, BccP subunit
YP_001758937.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_001758938.1	PFAM: BRCT domain protein; KEGG: cbe:Cbei_0352 DNA ligase, NAD-dependent
YP_001758939.1	PFAM: regulatory protein MarR; KEGG: ade:Adeh_1031 transcriptional regulator, MarR family
YP_001758940.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bmu:Bmul_4219 antibiotic biosynthesis monooxygenase
YP_001758941.1	PFAM: Class I peptide chain release factor; KEGG: sse:Ssed_4087 class I peptide chain release factor
YP_001758942.1	KEGG: sse:Ssed_4086 hypothetical protein
YP_001758943.1	KEGG: sse:Ssed_4085 hypothetical protein
YP_001758944.1	KEGG: sse:Ssed_4084 hypothetical protein
YP_001758945.1	KEGG: sse:Ssed_4083 outer membrane efflux family protein, putative
YP_001758946.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sse:Ssed_4082 efflux transporter, RND family, MFP subunit
YP_001758947.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sse:Ssed_4081 heavy metal efflux pump, CzcA family
YP_001758948.1	PFAM: PKD domain containing protein; peptidase M4 thermolysin; Propeptide PepSY amd peptidase M4; peptidase domain protein; Peptidase M4 thermolysin; KEGG: sdn:Sden_3015 peptidase M4, thermolysin
YP_001758949.1	KEGG: sse:Ssed_0673 hypothetical protein
YP_001758950.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: vvy:VVA0893 methyl-accepting chemotaxis protein
YP_001758951.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
YP_001758952.1	PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: sbn:Sbal195_1432 beta-N-acetylhexosaminidase
YP_001758953.1	PFAM: ROK family protein; KEGG: bfr:BF1751 ROK family transcriptional repressor
YP_001758954.1	PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1434 major facilitator superfamily MFS_1
YP_001758955.1	PFAM: polysaccharide deacetylase; Carbohydrate-binding family V/XII; KEGG: vha:VIBHAR_03626 hypothetical protein
YP_001758956.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbn:Sbal195_1435 transcriptional regulator, AraC family
YP_001758957.1	PFAM: aminotransferase class V; beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: slo:Shew_3354 aminotransferase, class V
YP_001758958.1	PFAM: peptidase M48 Ste24p; KEGG: vvy:VV2911 Zn-dependent protease with chaperone function
YP_001758959.1	PFAM: protein of unknown function DUF898 transmembrane; KEGG: vvy:VV2912 predicted membrane protein
YP_001758960.1	PFAM: conserved hypothetical protein; KEGG: slo:Shew_3353 conserved hypothetical protein 22
YP_001758961.1	KEGG: sse:Ssed_4075 hypothetical protein
YP_001758962.1	KEGG: sse:Ssed_4074 ATP-dependent protease La (LON) domain protein, putative
YP_001758963.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_4073 pseudouridine synthase
YP_001758965.1	KEGG: sse:Ssed_4072 hypothetical protein
YP_001758966.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mca:MCA2508 oxygenase, putative
YP_001758967.1	PFAM: globin; KEGG: mca:MCA2507 cyanobacterial globin family protein
YP_001758968.1	TIGRFAM: outer membrane adhesin like proteiin; KEGG: prw:PsycPRwf_1167 putative outer membrane adhesin like proteiin
YP_001758969.1	KEGG: vvy:VVA1274 hypothetical protein
YP_001758970.1	KEGG: ppr:PBPRB1968 hypothetical protein
YP_001758971.1	KEGG: vfi:VF0365 hypothetical protein
YP_001758973.1	KEGG: vha:VIBHAR_04990 hypothetical protein
YP_001758974.1	KEGG: shw:Sputw3181_3656 DedA family protein
YP_001758975.1	PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_0923 major facilitator superfamily MFS_1
YP_001758976.1	PFAM: IucA/IucC family protein; KEGG: vfi:VFA0161 aerobactin siderophore biosynthesis protein IucA
YP_001758977.1	KEGG: vfi:VFA0164 L-lysine 6-monooxygenase
YP_001758978.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: noc:Noc_1820 TonB-dependent receptor
YP_001758979.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sbm:Shew185_0436 dTDP-4-dehydrorhamnose reductase
YP_001758980.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_4070 integral membrane sensor signal transduction histidine kinase
YP_001758981.1	PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: spl:Spea_0553 two component transcriptional regulator, fis family
YP_001758982.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_4064 transcriptional regulator, LysR family
YP_001758983.1	KEGG: pfl:PFL_3381 hypothetical protein
YP_001758984.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sse:Ssed_4063 N-ethylmaleimide reductase, putative
YP_001758986.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sse:Ssed_2534 NAD-dependent epimerase/dehydratase
YP_001758987.1	KEGG: shw:Sputw3181_0735 hypothetical protein
YP_001758988.1	KEGG: shw:Sputw3181_0736 hypothetical protein
YP_001758989.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: spl:Spea_0554 sulphate transporter
YP_001758990.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_4057 short-chain dehydrogenase/reductase SDR
YP_001758991.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_4056 substrate-binding transcriptional regulator, LysR family
YP_001758992.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRA2493 hypothetical protein
YP_001758993.1	PFAM: Flp/Fap pilin component; KEGG: pmu:PM0855 fimbrial protein
YP_001758994.1	PFAM: peptidase A24A prepilin type IV; KEGG: ppr:PBPRA2494 hypothetical membrane protein
YP_001758995.1	KEGG: ppr:PBPRA2495 hypothetical protein
YP_001758996.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: ppr:PBPRA2496 hypothetical Flp pilus assembly protein
YP_001758997.1	KEGG: ppr:PBPRA2497 hypothetical protein
YP_001758998.1	KEGG: ppr:PBPRA2498 hypothetical protein
YP_001758999.1	PFAM: type II secretion system protein E; KEGG: ppr:PBPRA2499 putative Flp pilus assembly protein
YP_001759000.1	PFAM: type II secretion system protein; KEGG: ppr:PBPRA2500 hypothetical Flp pilus assembly protein TadB
YP_001759001.1	PFAM: type II secretion system protein; KEGG: ppr:PBPRA2501 hypothetical Flp pilus assembly protein TadC
YP_001759002.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ppr:PBPRA2502 hypothetical protein
YP_001759003.1	PFAM: TadE family protein; KEGG: vha:VIBHAR_06189 hypothetical protein
YP_001759004.1	KEGG: ppr:PBPRA2503 hypothetical protein
YP_001759005.1	KEGG: ppr:PBPRA2504 hypothetical protein
YP_001759006.1	PFAM: OmpA/MotB domain protein; KEGG: ppr:PBPRA2505 conserved hypothetical outer membrane protein
YP_001759007.1	KEGG: sse:Ssed_4054 hypothetical protein
YP_001759008.1	KEGG: gfo:GFO_2214 hypothetical protein
YP_001759009.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cth:Cthe_0408 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
YP_001759010.1	KEGG: spl:Spea_0557 putative plasmid transfer protein
YP_001759011.1	PFAM: protein of unknown function DUF81; KEGG: sse:Ssed_4043 protein of unknown function DUF81
YP_001759012.1	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis
YP_001759013.1	KEGG: sse:Ssed_4041 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_001759014.1	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_001759015.1	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor
YP_001759016.1	KEGG: slo:Shew_0526 hypothetical protein
YP_001759017.1	KEGG: dps:DP1297 hypothetical protein
YP_001759018.1	KEGG: sse:Ssed_4037 hypothetical protein
YP_001759021.1	PFAM: LmbE family protein; KEGG: sse:Ssed_4036 uncharacterized protein LmbE-like protein
YP_001759022.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: shw:Sputw3181_3540 protein of unknown function DUF6, transmembrane
YP_001759023.1	KEGG: sse:Ssed_4034 hypothetical protein
YP_001759024.1	PFAM: FAD dependent oxidoreductase; KEGG: slo:Shew_0530 FAD dependent oxidoreductase
YP_001759025.1	PFAM: regulatory protein MarR; KEGG: sse:Ssed_4032 transcriptional regulatory protein
YP_001759026.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_4031 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001759027.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_4029 DEAD/DEAH box helicase domain protein
YP_001759028.1	PFAM: peptidase M28; KEGG: sse:Ssed_4028 peptidase M28
YP_001759029.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: sse:Ssed_4027 excinuclease ABC, A subunit
YP_001759030.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_4026 major facilitator superfamily MFS_1
YP_001759031.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sse:Ssed_4025 single-strand binding protein
YP_001759032.1	KEGG: shm:Shewmr7_3154 curli production assembly/transport component CsgE, putative
YP_001759033.1	KEGG: shn:Shewana3_3254 curli production assembly/transport component CsgF, putative
YP_001759034.1	PFAM: Curli production assembly/transport component CsgG; KEGG: sdn:Sden_0971 curli production assembly/transport component CsgG
YP_001759035.1	PFAM: regulatory protein LuxR; KEGG: she:Shewmr4_0720 transcriptional regulator, LuxR family
YP_001759036.1	PFAM: Curlin associated repeat protein; KEGG: sbn:Sbal195_0876 curlin associated repeat protein
YP_001759037.1	PFAM: Curlin associated repeat protein; KEGG: sbl:Sbal_3498 curlin associated repeat protein
YP_001759038.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; Proprotein convertase P; KEGG: sdn:Sden_3093 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001759039.1	PFAM: peptidase domain protein; Peptidase M9A collagenase domain protein; Peptidase M9 domain; KEGG: son:SO_0639 collagenase family
YP_001759040.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sse:Ssed_4023 alcohol dehydrogenase, zinc-binding domain protein
YP_001759041.1	KEGG: sse:Ssed_4022 hypothetical protein
YP_001759042.1	PFAM: Aldose 1-epimerase; KEGG: sse:Ssed_4021 aldose 1-epimerase
YP_001759043.1	TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: sse:Ssed_4020 galactokinase
YP_001759044.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sse:Ssed_4016 sodium/hydrogen exchanger
YP_001759045.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: sse:Ssed_0808 putative signal transduction protein
YP_001759046.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_001759047.1	KEGG: sse:Ssed_0810 arginine N-succinyltransferase; TIGRFAM: arginine/ornithine succinyltransferase subunit; arginine N-succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit
YP_001759048.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_001759049.1	KEGG: sse:Ssed_0812 hypothetical protein
YP_001759050.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_3876 integral membrane sensor signal transduction histidine kinase
YP_001759051.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_3875 two component transcriptional regulator, winged helix family
YP_001759052.1	KEGG: sse:Ssed_3874 hypothetical protein
YP_001759053.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_001759054.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: sse:Ssed_3872 Sel1 domain protein repeat-containing protein
YP_001759055.1	KEGG: sse:Ssed_3871 hypothetical protein
YP_001759056.1	PFAM: outer membrane efflux protein; KEGG: sse:Ssed_3870 Co/Zn/Cd efflux system component
YP_001759057.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sse:Ssed_3869 cobalt-zinc-cadmium resistance protein (cation efflux system protein)
YP_001759058.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sse:Ssed_3868 cobalt-zinc-cadmium resistance protein CzcA (cation efflux system protein CzcA)
YP_001759059.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: sse:Ssed_3867 phosphoribulokinase
YP_001759060.1	PFAM: protein of unknown function UPF0270; KEGG: sse:Ssed_3866 hypothetical protein
YP_001759061.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_3865 alpha/beta hydrolase fold
YP_001759062.1	KEGG: sse:Ssed_3864 hypothetical protein
YP_001759063.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sse:Ssed_3863 glucose-methanol-choline oxidoreductase
YP_001759066.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ilo:IL1816 acetyltransferase, GNAT family
YP_001759068.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_3862 hypothetical protein
YP_001759069.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3861 ABC transporter-related protein
YP_001759070.1	PFAM: conserved hypothetical protein; KEGG: shw:Sputw3181_0827 hypothetical protein
YP_001759072.1	KEGG: sde:Sde_0015 phenylacetic acid degradation-related protein
YP_001759074.1	PFAM: helix-turn-helix domain protein; KEGG: sse:Ssed_3859 hypothetical protein
YP_001759075.1	KEGG: sse:Ssed_3855 hypothetical protein
YP_001759076.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_001759077.1	PFAM: NnrS family protein; KEGG: cps:CPS_0849 putative ATP synthase F0, A subunit
YP_001759078.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_001759079.1	KEGG: sse:Ssed_3853 hypothetical protein
YP_001759080.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_001759081.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gfo:GFO_1742 succinylglutamate desuccinylase/aspartoacylase family protein
YP_001759082.1	PFAM: CBS domain containing protein; KEGG: scl:sce0051 hypothetical protein
YP_001759083.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_3975 GGDEF
YP_001759085.1	KEGG: cps:CPS_3605 hypothetical protein
YP_001759086.1	PFAM: putative esterase; KEGG: sde:Sde_2868 cysteine synthase A
YP_001759087.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: slo:Shew_0603 glutathione-dependent formaldehyde-activating, GFA
YP_001759088.1	PFAM: peptidase S15; KEGG: cbe:Cbei_3182 alpha/beta superfamily-like hydrolase
YP_001759089.1	PFAM: Na+/H+ antiporter NhaC; KEGG: spl:Spea_3425 Na+/H+ antiporter NhaC
YP_001759090.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: cps:CPS_2816 putative RNA polymerase sigma-70 factor FecI
YP_001759091.1	PFAM: FecR protein; KEGG: cps:CPS_2817 putative regulatory protein
YP_001759092.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_2818 TonB-dependent receptor
YP_001759093.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_3851 DEAD/DEAH box helicase domain protein
YP_001759094.1	KEGG: sdn:Sden_1261 hypothetical protein
YP_001759095.1	KEGG: sse:Ssed_3850 hypothetical protein
YP_001759096.1	PFAM: protein of unknown function DUF262; KEGG: pth:PTH_0153 hypothetical protein
YP_001759097.1	KEGG: pth:PTH_0154 hypothetical protein
YP_001759099.1	KEGG: hch:HCH_06686 hypothetical protein
YP_001759100.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_001759101.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_001759102.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: spl:Spea_3491 methyl-accepting chemotaxis sensory transducer with cache sensor
YP_001759103.1	KEGG: sse:Ssed_3847 hypothetical protein
YP_001759104.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain
YP_001759105.1	PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sse:Ssed_3845 SH3 domain protein
YP_001759106.1	PFAM: phosphate transporter; KEGG: sse:Ssed_3844 phosphate transporter
YP_001759107.1	PFAM: protein of unknown function DUF47; KEGG: sse:Ssed_3843 protein of unknown function DUF47
YP_001759108.1	PFAM: adenylate cyclase; KEGG: sse:Ssed_3842 adenylate cyclase
YP_001759109.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sse:Ssed_3841 ion transport 2 domain protein
YP_001759110.1	KEGG: sse:Ssed_3840 hypothetical protein
YP_001759111.1	KEGG: sse:Ssed_3839 hypothetical protein
YP_001759112.1	PFAM: PspA/IM30 family protein; KEGG: sse:Ssed_3838 phage shock protein A, PspA
YP_001759113.1	KEGG: sse:Ssed_3837 hypothetical protein
YP_001759114.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_001759115.1	PFAM: protein of unknown function DUF350; KEGG: sse:Ssed_3835 protein of unknown function DUF350
YP_001759116.1	KEGG: sse:Ssed_3834 hypothetical protein
YP_001759117.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_001759118.1	KEGG: sse:Ssed_3832 hypothetical protein
YP_001759119.1	KEGG: sse:Ssed_3831 hypothetical protein
YP_001759120.1	KEGG: pha:PSHAa0646 hypothetical protein
YP_001759121.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_3829 putative ABC transport system permease protein
YP_001759122.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO_4053 methyl-accepting chemotaxis protein
YP_001759123.1	KEGG: sse:Ssed_3828 hypothetical protein
YP_001759124.1	PFAM: AFG1-family ATPase; KEGG: sse:Ssed_3826 AFG1-family ATPase
YP_001759126.1	PFAM: OmpA/MotB domain protein; KEGG: slo:Shew_0632 OmpA/MotB domain protein
YP_001759127.1	KEGG: slo:Shew_3624 hypothetical protein
YP_001759128.1	KEGG: slo:Shew_0633 hypothetical protein
YP_001759129.1	KEGG: saz:Sama_0720 hypothetical protein
YP_001759132.1	KEGG: slo:Shew_0638 cell surface receptor IPT/TIG domain protein
YP_001759133.1	KEGG: slo:Shew_0639 hypothetical protein
YP_001759134.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: slo:Shew_0640 TPR repeat-containing protein
YP_001759135.1	PFAM: protein of unknown function DUF192; KEGG: slo:Shew_0641 protein of unknown function DUF192
YP_001759136.1	PFAM: type II secretion system protein; KEGG: slo:Shew_0642 type II secretion system protein
YP_001759137.1	PFAM: type II secretion system protein; KEGG: slo:Shew_0643 type II secretion system protein
YP_001759138.1	PFAM: Forkhead-associated protein; type II secretion system protein E; KEGG: slo:Shew_0644 FHA domain containing protein
YP_001759139.1	PFAM: type II and III secretion system protein; KEGG: slo:Shew_0645 type II and III secretion system protein
YP_001759140.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: slo:Shew_0646 SAF domain protein
YP_001759141.1	KEGG: slo:Shew_0647 hypothetical protein
YP_001759142.1	KEGG: slo:Shew_0648 hypothetical protein
YP_001759143.1	KEGG: slo:Shew_0649 hypothetical protein
YP_001759144.1	KEGG: slo:Shew_0650 hypothetical protein
YP_001759145.1	KEGG: slo:Shew_0651 hypothetical protein
YP_001759146.1	KEGG: slo:Shew_0652 hypothetical protein
YP_001759147.1	PFAM: regulatory protein LuxR; KEGG: slo:Shew_0653 transcriptional regulator, LuxR family
YP_001759148.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_3825 peptidase M16 domain protein
YP_001759149.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_3824 peptidase M16 domain protein
YP_001759150.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_001759151.1	KEGG: shm:Shewmr7_0883 putative nitric oxide reductase (subunit B) transmembrane protein
YP_001759152.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_001759153.1	KEGG: sse:Ssed_3820 flagellar biosynthesis protein, putative
YP_001759154.1	PFAM: Ankyrin; KEGG: hch:HCH_04005 FOG: ankyrin repeat
YP_001759155.1	KEGG: bam:Bamb_0907 hypothetical protein
YP_001759156.1	KEGG: sse:Ssed_2789 hypothetical protein
YP_001759157.1	PFAM: regulatory protein MerR; Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_1437 putative transcriptional regulator, MerR family
YP_001759158.1	TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: sse:Ssed_3813 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
YP_001759159.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_001759160.1	KEGG: sse:Ssed_3811 hypothetical protein
YP_001759161.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_3810 transcriptional regulator, TetR family
YP_001759162.1	KEGG: sse:Ssed_3809 hypothetical protein
YP_001759163.1	KEGG: slo:Shew_0701 hypothetical protein
YP_001759164.1	PFAM: Rhomboid family protein; KEGG: slo:Shew_0702 rhomboid family protein
YP_001759165.1	PFAM: MltA-interacting MipA family protein; KEGG: sse:Ssed_3808 hypothetical protein
YP_001759166.1	TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: sse:Ssed_3807 sulfite reductase (NADPH) flavoprotein, alpha chain
YP_001759167.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_001759168.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_001759169.1	KEGG: sse:Ssed_3804 hypothetical protein
YP_001759170.1	KEGG: sse:Ssed_3803 hypothetical protein
YP_001759171.1	PFAM: protein of unknown function RIO1; KEGG: sse:Ssed_3802 protein of unknown function RIO1
YP_001759172.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_3801 redoxin domain protein
YP_001759173.1	KEGG: sse:Ssed_3800 hypothetical protein
YP_001759174.1	KEGG: sse:Ssed_3799 hypothetical protein
YP_001759175.1	PFAM: peptidase S41; KEGG: sse:Ssed_3798 hypothetical protein
YP_001759176.1	PFAM: phospholipase A1; KEGG: spl:Spea_0661 phospholipase A(1)
YP_001759177.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sse:Ssed_3797 uroporphyrin-III C-methyltransferase
YP_001759178.1	KEGG: sse:Ssed_3796 hypothetical protein
YP_001759179.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_3795 major facilitator superfamily MFS_1
YP_001759180.1	KEGG: sse:Ssed_3793 hypothetical protein
YP_001759181.1	KEGG: sse:Ssed_3792 putative lipoprotein
YP_001759182.1	PFAM: protein of unknown function DUF1111; KEGG: sse:Ssed_3791 protein of unknown function DUF1111
YP_001759183.1	KEGG: sse:Ssed_3790 protoporphyrinogen oxidase
YP_001759184.1	KEGG: sse:Ssed_3789 hypothetical protein
YP_001759185.1	PFAM: glycosyl transferase group 1; KEGG: sse:Ssed_3788 glycosyltransferase
YP_001759186.1	PFAM: DSBA oxidoreductase; KEGG: sse:Ssed_3787 DsbA oxidoreductase
YP_001759187.1	PFAM: heat shock protein DnaJ domain protein; KEGG: sse:Ssed_3786 heat shock protein DnaJ domain protein
YP_001759188.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; KEGG: sse:Ssed_3784 putative sensory transduction system, regulatory protein
YP_001759189.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE domain protein; KEGG: sse:Ssed_3783 sensory transduction system, regulatory protein
YP_001759190.1	KEGG: sse:Ssed_3782 hypothetical protein
YP_001759191.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sse:Ssed_3781 hypothetical protein
YP_001759192.1	KEGG: sse:Ssed_3780 hypothetical protein
YP_001759194.1	KEGG: sse:Ssed_3779 hypothetical protein
YP_001759195.1	KEGG: sse:Ssed_3777 hypothetical protein
YP_001759196.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_3776 diguanylate cyclase
YP_001759197.1	PFAM: protein of unknown function DUF331; KEGG: sse:Ssed_3774 hypothetical protein
YP_001759198.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_3705 methyl-accepting chemotaxis sensory transducer
YP_001759199.1	KEGG: cps:CPS_2231 hypothetical protein
YP_001759200.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cyb:CYB_0892 oxidoreductase, short chain dehydrogenase/reductase family
YP_001759201.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vha:VIBHAR_05499 transcriptional regulator
YP_001759202.1	PFAM: Endoribonuclease L-PSP; KEGG: pcr:Pcryo_1816 endoribonuclease L-PSP
YP_001759203.1	PFAM: Aldehyde Dehydrogenase; KEGG: vha:VIBHAR_05501 hypothetical protein
YP_001759204.1	PFAM: peptidase M19 renal dipeptidase; KEGG: vha:VIBHAR_05502 hypothetical protein
YP_001759205.1	PFAM: BCCT transporter; KEGG: pin:Ping_2126 BCCT transporter
YP_001759206.1	KEGG: vha:VIBHAR_05507 hypothetical protein
YP_001759207.1	KEGG: pin:Ping_2124 hypothetical protein
YP_001759208.1	PFAM: porin Gram-negative type; KEGG: she:Shewmr4_3228 porin, gram-negative type
YP_001759209.1	PFAM: major facilitator superfamily MFS_1; KEGG: spl:Spea_3419 major facilitator superfamily MFS_1
YP_001759210.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_3418 transcriptional regulator, AraC family
YP_001759211.1	PFAM: EAL domain protein; KEGG: shm:Shewmr7_0931 EAL domain protein
YP_001759212.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_001759213.1	PFAM: protein of unknown function UPF0061; KEGG: sse:Ssed_3772 hypothetical protein
YP_001759214.1	PFAM: DGPFAETKE family protein; KEGG: sit:TM1040_3855 hypothetical protein
YP_001759215.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: psa:PST_0150 probable sigma-70 factor, ECF subfamily
YP_001759216.1	PFAM: Methionine sulfoxide reductase A; KEGG: shn:Shewana3_4324 methionine sulfoxide reductase A
YP_001759217.1	KEGG: vvu:VV2_1425 glutamate decarboxylase
YP_001759218.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: azo:azo2403 probable two-component response regulator
YP_001759219.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: aba:Acid345_4059 multi-sensor hybrid histidine kinase
YP_001759220.1	KEGG: spl:Spea_3415 conserved hypothetical protein
YP_001759221.1	PFAM: response regulator receiver; KEGG: sse:Ssed_3764 response regulator receiver protein
YP_001759222.1	KEGG: spl:Spea_3417 lipoprotein, putative
YP_001759223.1	KEGG: sfr:Sfri_3637 hypothetical protein
YP_001759224.1	KEGG: sse:Ssed_3628 hypothetical protein
YP_001759225.1	KEGG: spl:Spea_2806 conserved hypothetical protein
YP_001759226.1	PFAM: Integral membrane protein TerC; KEGG: vha:VIBHAR_02536 hypothetical protein
YP_001759227.1	KEGG: sbl:Sbal_0644 hypothetical protein
YP_001759228.1	KEGG: slo:Shew_3022 hypothetical protein
YP_001759230.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: amr:AM1_2260 transcriptional regulator, LysR family
YP_001759231.1	KEGG: hch:HCH_00210 ABC-type sugar transport system, periplasmic component
YP_001759232.1	KEGG: vfi:VF1637 hypothetical protein
YP_001759233.1	KEGG: sse:Ssed_0849 hypothetical protein
YP_001759234.1	PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sfr:Sfri_3832 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001759235.1	PFAM: peptidase M19 renal dipeptidase; KEGG: slo:Shew_3107 peptidase M19, renal dipeptidase
YP_001759236.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: vfi:VF1089 immunogenic protein
YP_001759237.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vfi:VF1090 transporter
YP_001759241.1	KEGG: maq:Maqu_3716 hypothetical protein
YP_001759242.1	PFAM: aminotransferase class I and II; KEGG: ecx:EcHS_A0652 aminotransferase, classes I and II
YP_001759243.1	KEGG: mbu:Mbur_1645 ATPase
YP_001759244.1	KEGG: ava:Ava_0944 hypothetical protein
YP_001759245.1	PFAM: protein of unknown function DUF1568; KEGG: sse:Ssed_3659 protein of unknown function DUF1568
YP_001759247.1	PFAM: Fe-S metabolism associated SufE; KEGG: sse:Ssed_0853 Fe-S metabolism associated SufE
YP_001759248.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: sse:Ssed_0854 aminotransferase, class V
YP_001759249.1	PFAM: aldo/keto reductase; KEGG: sse:Ssed_0855 aldo/keto reductase
YP_001759250.1	PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: sse:Ssed_0856 transcriptional regulator, MarR family
YP_001759251.1	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog
YP_001759252.1	PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sse:Ssed_0858 aromatic amino acid permease
YP_001759253.1	KEGG: sse:Ssed_0859 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001759254.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0860 GCN5-related N-acetyltransferase
YP_001759255.1	KEGG: sse:Ssed_0861 hypothetical protein
YP_001759256.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sse:Ssed_0863 protein of unknown function DUF306, MetA and HslJ
YP_001759257.1	KEGG: sse:Ssed_0865 diguanylate cyclase
YP_001759258.1	TIGRFAM: diguanylate cyclase; KEGG: sse:Ssed_0866 GGDEF domain protein
YP_001759259.1	KEGG: sse:Ssed_0867 acetyltransferase, GNAT family
YP_001759260.1	KEGG: spl:Spea_0780 conserved hypothetical protein
YP_001759261.1	KEGG: spl:Spea_0782 conserved hypothetical protein
YP_001759262.1	KEGG: mfa:Mfla_2469 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001759263.1	PFAM: isochorismatase hydrolase; KEGG: ana:alr2122 hypothetical protein
YP_001759264.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_001759265.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_001759266.1	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate
YP_001759267.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_001759268.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_001759269.1	PFAM: protein of unknown function DUF481; KEGG: sse:Ssed_0878 protein of unknown function DUF481
YP_001759270.1	KEGG: sse:Ssed_0879 hypothetical protein
YP_001759271.1	KEGG: sse:Ssed_0880 hypothetical protein
YP_001759272.1	KEGG: sse:Ssed_0881 hypothetical protein
YP_001759273.1	KEGG: slo:Shew_0759 cytochrome c, putative
YP_001759274.1	PFAM: transcriptional regulator domain protein; KEGG: sse:Ssed_0883 response regulator receiver protein
YP_001759275.1	KEGG: sse:Ssed_0884 hypothetical protein
YP_001759276.1	KEGG: sse:Ssed_0885 hypothetical protein
YP_001759277.1	SMART: PAS domain containing protein; KEGG: sse:Ssed_0886 putative PAS/PAC sensor protein
YP_001759278.1	PFAM: Radical SAM domain protein; KEGG: sse:Ssed_0887 radical SAM domain protein
YP_001759279.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_0888 acriflavin resistance protein
YP_001759280.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_0889 efflux transporter, RND family, MFP subunit
YP_001759281.1	facilitates an early step in the assembly of the 50S subunit of the ribosome
YP_001759282.1	PFAM: methyltransferase small; KEGG: sse:Ssed_0891 methyltransferase small
YP_001759283.1	PFAM: branched-chain amino acid transport system II carrier protein; KEGG: sse:Ssed_0892 branched-chain amino acid transport system II carrier protein
YP_001759284.1	TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sse:Ssed_0893 tyrosine recombinase XerD
YP_001759285.1	KEGG: sse:Ssed_0894 thiol:disulfide interchange protein DsbC
YP_001759286.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sse:Ssed_0895 single-stranded-DNA-specific exonuclease RecJ
YP_001759287.1	KEGG: mmr:Mmar10_1711 coenzyme PQQ synthesis protein B
YP_001759288.1	KEGG: bsu:BSU20940 hypothetical protein
YP_001759291.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_001759292.1	PFAM: protein of unknown function DUF1456; KEGG: sse:Ssed_3517 protein of unknown function DUF1456
YP_001759293.1	PFAM: beta-lactamase; KEGG: spc:Sputcn32_0856 beta-lactamase
YP_001759294.1	KEGG: sse:Ssed_3515 putative manganese transporter
YP_001759295.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_0967 TonB-dependent receptor
YP_001759296.1	PFAM: Glutathione S-transferase domain; KEGG: sse:Ssed_3513 glutathione S-transferase, N-terminal domain
YP_001759297.1	KEGG: sse:Ssed_3512 hypothetical protein
YP_001759298.1	KEGG: sse:Ssed_3511 hypothetical protein
YP_001759299.1	KEGG: sse:Ssed_3510 hypothetical protein
YP_001759300.1	PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sse:Ssed_3509 endothelin-converting enzyme 1
YP_001759301.1	PFAM: pseudouridine synthase; KEGG: vfi:VFA0485 ribosomal large subunit pseudouridine synthase A
YP_001759302.1	The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001759303.1	PFAM: protein of unknown function DUF1704; KEGG: spl:Spea_3220 protein of unknown function DUF1704
YP_001759304.1	transcriptional repressor of asnA which codes for aspartate-ammonia ligase
YP_001759305.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_0821 pseudouridylate synthase
YP_001759306.1	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: saz:Sama_0607 putative transcriptional regulator, CadC
YP_001759308.1	KEGG: sse:Ssed_0822 hypothetical protein
YP_001759309.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_0823 methyltransferase type 12
YP_001759310.1	KEGG: sse:Ssed_0824 hypothetical protein
YP_001759311.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sse:Ssed_0825 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001759312.1	PFAM: dienelactone hydrolase; KEGG: sse:Ssed_0826 dienelactone hydrolase
YP_001759313.1	KEGG: sse:Ssed_0827 hypothetical protein
YP_001759315.1	PFAM: Spermine synthase; KEGG: sse:Ssed_0828 spermine synthase
YP_001759316.1	TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_0829 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001759317.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: sse:Ssed_0830 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001759318.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_0831 diguanylate cyclase
YP_001759319.1	KEGG: sse:Ssed_0832 hypothetical protein
YP_001759320.1	KEGG: sse:Ssed_0833 hypothetical protein
YP_001759321.1	KEGG: spl:Spea_0751 conserved hypothetical protein
YP_001759322.1	PFAM: regulatory protein MarR; KEGG: sse:Ssed_0835 transcriptional regulator, MarR family protein
YP_001759323.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0836 FAD dependent oxidoreductase
YP_001759324.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: spl:Spea_0753 chromate transporter, chromate ion transporter (CHR) family
YP_001759325.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_0838 formate dehydrogenase, alpha subunit
YP_001759326.1	PFAM: pentapeptide repeat protein; Ion transport 2 domain protein; KEGG: sse:Ssed_0839 ion transport 2 domain protein
YP_001759327.1	programmed frameshift
YP_001759328.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_001759329.1	KEGG: sfr:Sfri_2048 L-sorbosone dehydrogenase, putative
YP_001759330.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_0843 RNA pseudouridine synthase family protein
YP_001759331.1	TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: spl:Spea_0760 glucosamine-6-phosphate isomerase
YP_001759332.1	KEGG: sfr:Sfri_3542 hypothetical protein
YP_001759333.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: syn:sll1673 two-component response regulator
YP_001759334.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_2875 outer membrane protein
YP_001759335.1	PFAM: nitroreductase; KEGG: saz:Sama_2969 nitroreductase
YP_001759336.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: sse:Ssed_0846 cupin 2, conserved barrel domain protein
YP_001759337.1	PFAM: peptidase U32; KEGG: sse:Ssed_0847 peptidase U32
YP_001759338.1	PFAM: protein of unknown function DUF1696; KEGG: sse:Ssed_0848 protein of unknown function DUF1696
YP_001759339.1	PFAM: Ankyrin; KEGG: tva:TVAG_185910 ankyrin repeat protein, putative
YP_001759340.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: slo:Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001759341.1	PFAM: Extracellular ligand-binding receptor; KEGG: rba:RB7306 probable leucine/isoleucine/valine-binding protein precursor
YP_001759342.1	PFAM: ATP-binding region ATPase domain protein; KEGG: amr:AM1_1966 signal transduction histidine kinase with HAMP domain
YP_001759343.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_001759344.1	PFAM: protein of unknown function DUF808; KEGG: sse:Ssed_0900 protein of unknown function DUF808
YP_001759345.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: spl:Spea_1945 peptidyl-prolyl cis-trans isomerase cyclophilin type
YP_001759346.1	PFAM: CBS domain containing protein; KEGG: sse:Ssed_0909 CBS domain containing protein
YP_001759347.1	KEGG: sse:Ssed_0910 alkaline phosphatase
YP_001759348.1	PFAM: phosphoribosyltransferase; KEGG: slo:Shew_0833 hypoxanthine-guanine phosphoribosyltransferase
YP_001759349.1	KEGG: sse:Ssed_0912 hypothetical protein
YP_001759350.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sse:Ssed_0913 aminopeptidase N
YP_001759351.1	TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: sse:Ssed_2729 conserved hypothetical phosphoesterase
YP_001759352.1	TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: sse:Ssed_0914 hypothetical protein
YP_001759353.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sse:Ssed_0915 tetratricopeptide TPR_2 repeat protein
YP_001759354.1	PFAM: SlyX family protein; KEGG: sse:Ssed_0916 SlyX family protein
YP_001759355.1	PFAM: WD-40 repeat protein; KEGG: sse:Ssed_0917 WD-40 repeat protein
YP_001759356.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: sse:Ssed_0918 peptidylprolyl isomerase, FKBP-type
YP_001759357.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_0928 uncharacterized conserved protein UCP006287
YP_001759358.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sse:Ssed_0929 two component transcriptional regulator, LuxR family
YP_001759359.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sse:Ssed_0930 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
YP_001759360.1	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552
YP_001759361.1	KEGG: hch:HCH_10011 hypothetical protein
YP_001759364.1	KEGG: mmw:Mmwyl1_3292 5-carboxymethyl-2-hydroxymuconate isomerase
YP_001759366.1	PFAM: isochorismatase hydrolase; KEGG: sse:Ssed_0932 isochorismatase hydrolase
YP_001759367.1	PFAM: nitrogen regulatory protein P-II; KEGG: sse:Ssed_0933 nitrogen regulatory protein P-II
YP_001759368.1	PFAM: Rh family protein/ammonium transporter; KEGG: sse:Ssed_0934 Rh family protein/ammonium transporter
YP_001759369.1	PFAM: DSBA oxidoreductase; KEGG: pat:Patl_1112 DsbA oxidoreductase
YP_001759370.1	KEGG: sse:Ssed_0935 hypothetical protein
YP_001759371.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_0936 TPR repeat-containing protein
YP_001759372.1	KEGG: spc:Sputcn32_1416 hypothetical protein
YP_001759373.1	KEGG: slo:Shew_3563 hypothetical protein
YP_001759374.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_001759375.1	KEGG: sse:Ssed_0938 hypothetical protein
YP_001759376.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0939 ABC transporter-related protein
YP_001759377.1	KEGG: sse:Ssed_0940 hypothetical protein
YP_001759378.1	KEGG: sbn:Sbal195_3824 hypothetical protein
YP_001759379.1	PFAM: Phosphoglycerate mutase; KEGG: sse:Ssed_0941 hypothetical protein
YP_001759380.1	KEGG: sse:Ssed_0942 hypothetical protein
YP_001759381.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sse:Ssed_0943 oxidoreductase FAD/NAD(P)-binding domain protein
YP_001759382.1	PFAM: Glutathione S-transferase domain; KEGG: sse:Ssed_0944 glutathione S-transferase, N-terminal domain
YP_001759383.1	KEGG: shn:Shewana3_3518 hypothetical protein
YP_001759384.1	PFAM: extracellular solute-binding protein family 1; KEGG: spl:Spea_0844 extracellular solute-binding protein family 1
YP_001759385.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_0946 binding-protein-dependent transport systems inner membrane component
YP_001759386.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sse:Ssed_0947 ABC transporter related
YP_001759387.1	KEGG: shn:Shewana3_3514 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001759388.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: sse:Ssed_0949 Dyp-type peroxidase family
YP_001759389.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_001759390.1	oxidizes malate to oxaloacetate
YP_001759391.1	PFAM: Polyprenyl synthetase; KEGG: sse:Ssed_0953 trans-hexaprenyltranstransferase
YP_001759392.1	PFAM: ribosomal protein L21; KEGG: slo:Shew_0869 ribosomal protein L21
YP_001759393.1	involved in the peptidyltransferase reaction during translation
YP_001759394.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_001759395.1	PFAM: protein of unknown function DUF1212; KEGG: sse:Ssed_0957 protein of unknown function DUF1212
YP_001759396.1	KEGG: sse:Ssed_0958 hypothetical protein
YP_001759397.1	PFAM: dihydrofolate reductase region; KEGG: sse:Ssed_0959 dihydrofolate reductase
YP_001759398.1	KEGG: sse:Ssed_0960 hypothetical protein
YP_001759399.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_0961 methyl-accepting chemotaxis sensory transducer
YP_001759400.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_001759401.1	protein associated with Co2+ and Mg2+ efflux
YP_001759402.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_001759403.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_001759404.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sse:Ssed_0966 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001759405.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: sse:Ssed_0967 organic solvent tolerance protein
YP_001759406.1	PFAM: aminoglycoside phosphotransferase; KEGG: sse:Ssed_0968 aminoglycoside phosphotransferase
YP_001759407.1	PFAM: Nucleotidyl transferase; KEGG: sse:Ssed_0969 nucleotidyl transferase
YP_001759408.1	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system
YP_001759409.1	KEGG: sse:Ssed_0971 hypothetical protein
YP_001759410.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sse:Ssed_0972 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001759411.1	KEGG: sse:Ssed_0974 hypothetical protein
YP_001759412.1	PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_0975 secretion protein HlyD family protein
YP_001759413.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sse:Ssed_0977 AAA ATPase, central domain protein
YP_001759414.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbn:Sbal195_3775 glycerophosphoryl diester phosphodiesterase
YP_001759415.1	KEGG: sse:Ssed_0978 hypothetical protein
YP_001759416.1	PFAM: protein of unknown function DUF1289; KEGG: sse:Ssed_0979 Fe-S protein-like protein
YP_001759417.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_0980 integral membrane sensor signal transduction histidine kinase
YP_001759418.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_0981 two component transcriptional regulator, winged helix family
YP_001759419.1	KEGG: sse:Ssed_0982 hypothetical protein
YP_001759420.1	PFAM: MltA-interacting MipA family protein; KEGG: sse:Ssed_0983 MltA-interacting MipA family protein
YP_001759421.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_0984 acyl-CoA dehydrogenase domain protein
YP_001759422.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001759423.1	PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: sdn:Sden_3017 transketolase, central region
YP_001759424.1	KEGG: sdn:Sden_3016 (acyl-carrier-protein) S-malonyltransferase
YP_001759425.1	KEGG: sse:Ssed_0987 histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein
YP_001759426.1	PFAM: response regulator receiver; KEGG: sse:Ssed_0985 response regulator receiver protein
YP_001759427.1	KEGG: sse:Ssed_0986 Hpt protein
YP_001759428.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: sse:Ssed_0987 histidine kinase
YP_001759429.1	PFAM: UspA domain protein; KEGG: sse:Ssed_0988 UspA domain protein
YP_001759430.1	KEGG: sse:Ssed_0989 hypothetical protein
YP_001759431.1	PFAM: Protein of unknown function DUF1971; KEGG: slo:Shew_0910 hypothetical protein
YP_001759432.1	KEGG: sse:Ssed_0991 hypothetical protein
YP_001759433.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_0992 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001759434.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ilo:IL1591 glyoxalase/dioxygenase superfamily protein
YP_001759435.1	PFAM: NADPH-dependent FMN reductase; KEGG: sse:Ssed_0994 NADPH-dependent FMN reductase
YP_001759436.1	PFAM: Helix-turn-helix type 11 domain protein; KEGG: sse:Ssed_0995 hypothetical protein
YP_001759437.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sse:Ssed_0996 pseudouridine synthase
YP_001759438.1	PFAM: GPR1/FUN34/yaaH family protein; KEGG: sse:Ssed_0999 hypothetical protein
YP_001759439.1	PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: slo:Shew_0919 diguanylate phosphodiesterase
YP_001759440.1	PFAM: major facilitator superfamily MFS_1; KEGG: spl:Spea_0891 major facilitator superfamily MFS_1
YP_001759441.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1001 hypothetical protein
YP_001759442.1	KEGG: spl:Spea_0899 conserved hypothetical protein
YP_001759443.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: rde:RD1_2161 methyl-accepting chemotaxis protein, putative
YP_001759444.1	PFAM: AMMECR1 domain protein; KEGG: sse:Ssed_1003 hypothetical protein
YP_001759445.1	PFAM: protein of unknown function DUF52; KEGG: spl:Spea_0897 protein of unknown function DUF52
YP_001759446.1	PFAM: Radical SAM domain protein; KEGG: spl:Spea_0898 radical SAM domain protein
YP_001759447.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_001759448.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: sse:Ssed_1009 DNA polymerase III chi subunit, HolC
YP_001759450.1	KEGG: shm:Shewmr7_3879 hypothetical protein
YP_001759451.1	PFAM: KAP P-loop domain protein; KEGG: pha:PSHAa0207 hypothetical protein
YP_001759452.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sfr:Sfri_0864 transposase IS116/IS110/IS902 family protein
YP_001759453.1	KEGG: abu:Abu_1649 hypothetical protein
YP_001759454.1	PFAM: conserved hypothetical protein; KEGG: spl:Spea_2251 conserved hypothetical protein
YP_001759455.1	KEGG: cps:CPS_0445 hypothetical protein
YP_001759456.1	TIGRFAM: superoxide dismutase, Ni; PFAM: Superoxide dismutase Ni-type; KEGG: cps:CPS_0444 putative nickel-containing superoxide dismutase
YP_001759458.1	KEGG: cps:CPS_0442 hypothetical protein
YP_001759459.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: amt:Amet_2540 AAA ATPase, central domain protein
YP_001759460.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_3075 transcriptional regulator, AraC family
YP_001759461.1	KEGG: cps:CPS_3074 cytochrome P460
YP_001759462.1	KEGG: sal:Sala_0131 cytochrome c, class I
YP_001759463.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: spl:Spea_0907 protein of unknown function DUF21
YP_001759464.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_001759465.1	PFAM: permease YjgP/YjgQ family protein; KEGG: sse:Ssed_1015 permease YjgP/YjgQ family protein
YP_001759466.1	PFAM: permease YjgP/YjgQ family protein; KEGG: sse:Ssed_1016 permease YjgP/YjgQ family protein
YP_001759467.1	PFAM: RDD domain containing protein; KEGG: sse:Ssed_1017 RDD domain containing protein
YP_001759468.1	KEGG: sse:Ssed_1018 hypothetical protein
YP_001759469.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1019 GCN5-related N-acetyltransferase
YP_001759470.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: sse:Ssed_1020 carboxypeptidase Taq
YP_001759471.1	PFAM: protein of unknown function DUF1449; KEGG: shm:Shewmr7_2900 protein of unknown function DUF1449
YP_001759472.1	PFAM: band 7 protein; KEGG: slo:Shew_0946 band 7 protein
YP_001759473.1	KEGG: cps:CPS_2167 hypothetical protein
YP_001759474.1	KEGG: sus:Acid_0589 hypothetical protein
YP_001759476.1	KEGG: sdn:Sden_2842 hypothetical protein
YP_001759481.1	KEGG: slo:Shew_0948 hypothetical protein
YP_001759482.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: saz:Sama_0807 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001759483.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_1022 DEAD/DEAH box helicase domain protein
YP_001759484.1	PFAM: creatinase; peptidase M24; KEGG: sse:Ssed_1024 peptidase M24
YP_001759485.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1025 major facilitator superfamily MFS_1
YP_001759486.1	PFAM: ROK family protein; KEGG: sse:Ssed_1026 ROK family protein
YP_001759487.1	PFAM: creatinase; peptidase M24; KEGG: sse:Ssed_1028 peptidase M24
YP_001759488.1	PFAM: PKD domain containing protein; glycoside hydrolase family 18; Carbohydrate-binding family V/XII; Chitinase A domain protein; SMART: chitinase II; KEGG: sbl:Sbal_3083 chitinase
YP_001759489.1	PFAM: glycoside hydrolase family 19; Carbohydrate-binding family V/XII; KEGG: aha:AHA_0979 basic endochitinase
YP_001759490.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sse:Ssed_1029 peptidylprolyl isomerase, FKBP-type
YP_001759491.1	PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: cps:CPS_0148 cold-shock DNA-binding domain family protein
YP_001759492.1	KEGG: slo:Shew_3149 lipoprotein, putative
YP_001759493.1	PFAM: regulatory protein MarR; KEGG: slo:Shew_3148 transcriptional regulator, MarR family
YP_001759494.1	KEGG: sse:Ssed_1037 hypothetical protein
YP_001759495.1	PFAM: protein of unknown function DUF368; KEGG: sse:Ssed_1038 protein of unknown function DUF368
YP_001759497.1	KEGG: sse:Ssed_1039 hypothetical protein
YP_001759498.1	KEGG: sse:Ssed_1040 hypothetical protein
YP_001759499.1	PFAM: conserved hypothetical protein; KEGG: sfr:Sfri_3025 hypothetical protein
YP_001759500.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: spl:Spea_0934 protein of unknown function DUF861 cupin_3
YP_001759501.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1043 methylmalonate-semialdehyde dehydrogenase
YP_001759502.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_001759503.1	PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1045 aldehyde dehydrogenase (NAD(+))
YP_001759504.1	PFAM: sodium:dicarboxylate symporter; KEGG: sse:Ssed_1046 sodium:dicarboxylate symporter
YP_001759505.1	PFAM: beta-lactamase domain protein; KEGG: ecv:APECO1_3784 hypothetical protein
YP_001759506.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_2735 transcriptional regulator, LysR family
YP_001759507.1	catalyzes the formation of D-ribose 5-phosphate from ribose
YP_001759508.1	Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific
YP_001759509.1	catalyzes the formation of inosine from adenosine
YP_001759510.1	PFAM: nitroreductase; KEGG: nmr:Nmar_1696 nitroreductase
YP_001759511.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vpa:VPA0216 putative transcription regulator protein
YP_001759513.1	KEGG: dra:DR_1805 hypothetical protein
YP_001759514.1	KEGG: spl:Spea_2277 peptidase S15
YP_001759515.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_1057 FAD dependent oxidoreductase
YP_001759516.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sse:Ssed_1058 transcriptional regulator, XRE family
YP_001759517.1	PFAM: peptidase C26; KEGG: sse:Ssed_1059 peptidase C26
YP_001759518.1	PFAM: glutamine synthetase catalytic region; KEGG: sse:Ssed_1060 glutamate--putrescine ligase
YP_001759519.1	PFAM: extracellular solute-binding protein family 1; KEGG: slo:Shew_0973 extracellular solute-binding protein, family 1
YP_001759520.1	KEGG: sse:Ssed_1062 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_001759521.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1063 binding-protein-dependent transport systems inner membrane component
YP_001759522.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1064 ornithine carbamoyltransferase
YP_001759523.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_1065 FAD dependent oxidoreductase
YP_001759524.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_1067 putative glutamate synthase (NADPH)
YP_001759525.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: sse:Ssed_1068 2-ketoglutarate: NADP oxidoreductase, alpha subunit
YP_001759526.1	catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_001759527.1	KEGG: sbl:Sbal_1120 hypothetical protein
YP_001759528.1	PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_1121 tryptophan halogenase
YP_001759529.1	SMART: transcription factor jumonji jmjC domain protein; KEGG: sbl:Sbal_1122 transcription factor jumonji, JmjC domain protein
YP_001759530.1	PFAM: SapC family protein; KEGG: sfr:Sfri_1311 SapC family protein
YP_001759531.1	PFAM: tryptophan halogenase; KEGG: sbl:Sbal_1124 tryptophan halogenase
YP_001759532.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbm:Shew185_1180 TonB-dependent receptor plug
YP_001759533.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbn:Sbal195_1214 transcriptional regulator, LacI family
YP_001759534.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1215 sugar (glycoside-pentoside-hexuronide) transporter
YP_001759535.1	KEGG: sbl:Sbal_1131 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1
YP_001759536.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_1217 glucose/galactose transporter
YP_001759537.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: sbl:Sbal_1133 beta-glucosidase
YP_001759538.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_001759541.1	TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: sse:Ssed_1072 RNA polymerase, sigma 70 subunit, RpoD family
YP_001759542.1	KEGG: sse:Ssed_1073 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase DnaG DnaB-binding; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_001759543.1	KEGG: sse:Ssed_1074 GatB/YqeY domain protein
YP_001759544.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_001759545.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_001759546.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_001759547.1	TIGRFAM: dihydroneopterin aldolase; KEGG: sse:Ssed_1078 dihydroneopterin aldolase
YP_001759548.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: sse:Ssed_1079 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_001759549.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_001759550.1	KEGG: sse:Ssed_1081 rRNA (guanine-N(1)-)-methyltransferase
YP_001759551.1	PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sse:Ssed_1082 ErfK/YbiS/YcfS/YnhG family protein
YP_001759553.1	KEGG: sse:Ssed_1083 major outer membrane lipoprotein, putative
YP_001759554.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: sse:Ssed_1084 metal dependent phosphohydrolase
YP_001759555.1	PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: sse:Ssed_1085 peptidoglycan-binding domain 1 protein
YP_001759556.1	KEGG: sse:Ssed_1086 general secretion pathway protein B
YP_001759557.1	PFAM: Citrate transporter; KEGG: sse:Ssed_1087 citrate transporter
YP_001759558.1	KEGG: shn:Shewana3_3072 hypothetical protein
YP_001759559.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_001759560.1	Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate
YP_001759561.1	PFAM: cytochrome c class I; KEGG: spl:Spea_0979 cytochrome c class I
YP_001759562.1	KEGG: spl:Spea_0980 hypothetical protein
YP_001759563.1	PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: spl:Spea_0981 oxidoreductase molybdopterin binding
YP_001759564.1	PFAM: cytochrome c class I; KEGG: spl:Spea_0982 cytochrome c class I
YP_001759565.1	KEGG: slo:Shew_3643 hypothetical protein
YP_001759566.1	catalyzes the formation of fumarate from aspartate
YP_001759567.1	PFAM: SNARE associated Golgi protein; KEGG: spl:Spea_3035 SNARE associated Golgi protein
YP_001759568.1	PFAM: Integral membrane protein TerC; KEGG: aha:AHA_1890 TerC protein
YP_001759569.1	PFAM: nitrogen regulatory protein P-II; KEGG: shn:Shewana3_0779 nitrogen regulatory protein P-II
YP_001759570.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sbn:Sbal195_3728 ammonium transporter
YP_001759571.1	KEGG: sbn:Sbal195_0549 hypothetical protein
YP_001759572.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_5624 alkylhydroperoxidase-like protein, AhpD family
YP_001759573.1	KEGG: sfr:Sfri_3618 hypothetical protein
YP_001759574.1	PFAM: amidohydrolase; KEGG: hne:HNE_0404 amidohydrolase family protein
YP_001759575.1	KEGG: sdn:Sden_1870 hypothetical protein
YP_001759576.1	KEGG: son:SO_1864 hypothetical protein
YP_001759577.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO_0899 glyoxalase family protein
YP_001759578.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bcl:ABC1420 hypothetical protein
YP_001759579.1	KEGG: stm:STM0409 hypothetical protein
YP_001759580.1	KEGG: bld:BLi00372 similar to proteins
YP_001759581.1	PFAM: regulatory protein MarR; KEGG: spl:Spea_1004 transcriptional regulator, MarR family
YP_001759582.1	PFAM: conserved hypothetical protein; KEGG: spl:Spea_1005 conserved hypothetical protein
YP_001759583.1	KEGG: sse:Ssed_1118 putative transporter, BCCT family protein
YP_001759584.1	catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine
YP_001759585.1	catalyzes the formation of betaine from betaine aldehyde
YP_001759586.1	HTH-type; bet1; Repressor involved in choline regulation of the bet genes
YP_001759589.1	PFAM: Chloride channel core; KEGG: sse:Ssed_1093 Cl-channel, voltage-gated family protein
YP_001759590.1	KEGG: sse:Ssed_1094 hypothetical protein
YP_001759591.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_001759592.1	KEGG: sse:Ssed_1096 hypothetical protein
YP_001759593.1	KEGG: sse:Ssed_1097 hypothetical protein
YP_001759594.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
YP_001759595.1	PFAM: Alkaline phosphatase; KEGG: spl:Spea_0989 alkaline phosphatase
YP_001759596.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: spl:Spea_0990 peptidase S9 prolyl oligopeptidase active site domain protein
YP_001759597.1	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: spl:Spea_0992 putative two component transcriptional regulator, winged helix family
YP_001759598.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_001759599.1	PFAM: peptidase M23B; Opacity-associated protein A domain protein; KEGG: sse:Ssed_1103 peptidase M23B
YP_001759600.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_001759601.1	KEGG: sse:Ssed_1111 hypothetical protein
YP_001759602.1	PFAM: protein of unknown function UPF0126; KEGG: sse:Ssed_1112 protein of unknown function UPF0126
YP_001759603.1	KEGG: spl:Spea_0999 conserved hypothetical protein
YP_001759604.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: sse:Ssed_1114 cobalamin biosynthesis protein CbiB
YP_001759605.1	PFAM: purine or other phosphorylase family 1; KEGG: shn:Shewana3_3052 purine and other phosphorylases, family 1
YP_001759606.1	KEGG: cps:CPS_2852 hypothetical protein
YP_001759608.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_001759609.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_001759610.1	KEGG: sse:Ssed_1127 conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001759611.1	PFAM: Hpt domain protein; KEGG: sse:Ssed_1128 Hpt protein
YP_001759612.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1129 transcriptional regulator, LysR family
YP_001759613.1	KEGG: sse:Ssed_1130 putative adenylate/guanylate cyclase
YP_001759614.1	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
YP_001759615.1	hydrolyzes diadenosine polyphosphate
YP_001759616.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sse:Ssed_1133 PTSINtr with GAF domain, PtsP
YP_001759617.1	PFAM: protein of unknown function DUF81; KEGG: sse:Ssed_1134 protein of unknown function DUF81
YP_001759618.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_001759619.1	KEGG: sse:Ssed_1137 hypothetical protein
YP_001759620.1	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC
YP_001759621.1	PFAM: protein of unknown function DUF339; KEGG: sse:Ssed_1139 protein of unknown function DUF339
YP_001759622.1	KEGG: sse:Ssed_1140 hypothetical protein
YP_001759623.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_001759624.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_001759625.1	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: sse:Ssed_1143 anti sigma-E protein, RseA
YP_001759626.1	PFAM: MucB/RseB family protein; KEGG: sse:Ssed_1144 sigma E regulatory protein, MucB/RseB
YP_001759627.1	PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: sse:Ssed_1145 positive regulator of sigma E, RseC/MucC
YP_001759628.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_001759629.1	KEGG: sse:Ssed_1147 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_001759630.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_001759631.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_001759632.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: sse:Ssed_1150 DNA repair protein RecO
YP_001759633.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_001759634.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_001759635.1	KEGG: pdi:BDI_2833 conserved hypothetical protein, possible ATP/GTP-binding site
YP_001759636.1	KEGG: rxy:Rxyl_2652 hypothetical protein
YP_001759637.1	PFAM: protein of unknown function DUF962; KEGG: sse:Ssed_1155 protein of unknown function DUF962
YP_001759638.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: sse:Ssed_1156 protein of unknown function DUF21
YP_001759639.1	PFAM: cytochrome c assembly protein; KEGG: sse:Ssed_1157 cytochrome c assembly protein
YP_001759640.1	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins
YP_001759641.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_001759642.1	Essential for efficient processing of 16S rRNA
YP_001759643.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_001759644.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_001759645.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_001759646.1	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis
YP_001759647.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_001759648.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sse:Ssed_1166 oxidoreductase FAD-binding domain protein
YP_001759649.1	KEGG: sse:Ssed_1167 hypothetical protein
YP_001759650.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: sse:Ssed_1168 chorismate mutase
YP_001759651.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sse:Ssed_1169 ribosomal subunit interface protein
YP_001759652.1	PFAM: cytochrome B561; KEGG: sse:Ssed_1170 cytochrome b561
YP_001759653.1	PFAM: cytochrome c prime; KEGG: sse:Ssed_1171 cytochrome c, class II
YP_001759654.1	TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: sse:Ssed_1172 Trp operon repressor
YP_001759655.1	KEGG: son:SO_3418 hypothetical protein
YP_001759656.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sse:Ssed_1174 peptidylprolyl isomerase, FKBP-type
YP_001759657.1	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_001759658.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_001759659.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_001759660.1	KEGG: sse:Ssed_1178 hypothetical protein
YP_001759661.1	KEGG: sse:Ssed_1179 deoxyribonuclease IV (phage-T(4)-induced); TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2
YP_001759662.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: sse:Ssed_1180 PAS/PAC sensor hybrid histidine kinase
YP_001759663.1	PFAM: response regulator receiver; KEGG: sse:Ssed_1181 response regulator receiver protein
YP_001759664.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: sse:Ssed_1182 hemerythrin HHE cation binding domain protein
YP_001759665.1	KEGG: sse:Ssed_1183 hypothetical protein
YP_001759666.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_001759667.1	KEGG: sse:Ssed_1185 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_001759668.1	PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: slo:Shew_1090 OmpA/MotB domain protein
YP_001759669.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: sse:Ssed_1186 phosphoketolase
YP_001759670.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sse:Ssed_1187 amino acid carrier protein
YP_001759671.1	PFAM: protein of unknown function DUF328; KEGG: sse:Ssed_1188 protein of unknown function DUF328
YP_001759673.1	PFAM: peptidase M20; peptidase M28; KEGG: sse:Ssed_1189 peptidase M28
YP_001759674.1	PFAM: regulatory protein ArsR; KEGG: sse:Ssed_1190 transcriptional regulator, ArsR family
YP_001759675.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_001759676.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: sse:Ssed_1192 integral membrane protein MviN
YP_001759677.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: sse:Ssed_1193 riboflavin biosynthesis protein RibF
YP_001759678.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_001759679.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_001759680.1	KEGG: sse:Ssed_1196 peptidylprolyl isomerase, FKBP-type
YP_001759681.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_001759682.1	TIGRFAM: type IV pilus modification protein PilV; KEGG: spl:Spea_1087 type IV pilus modification protein PilV
YP_001759683.1	KEGG: saz:Sama_0929 type IV pilus assembly protein PilW
YP_001759684.1	KEGG: spl:Spea_1089 type IV pilus assembly protein PilX
YP_001759685.1	KEGG: sbm:Shew185_1128 type IV pilin biogenesis protein, putative
YP_001759686.1	KEGG: sdn:Sden_2715 methylation
YP_001759687.1	KEGG: sse:Ssed_1203 hypothetical protein
YP_001759688.1	KEGG: spl:Spea_1093 type IV pilus biogenesis protein, putative
YP_001759689.1	KEGG: sse:Ssed_1205 type IV pilus biogenesis protein, putative
YP_001759690.1	PFAM: nitrogen regulatory protein P-II; KEGG: slo:Shew_1110 nitrogen regulatory protein P-II
YP_001759691.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sse:Ssed_1207 alanine racemase
YP_001759692.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdn:Sden_2708 TonB-dependent receptor
YP_001759693.1	PFAM: tryptophan halogenase; KEGG: sdn:Sden_2707 tryptophan halogenase
YP_001759694.1	PFAM: SapC family protein; KEGG: sse:Ssed_1210 SapC family protein
YP_001759695.1	PFAM: protein of unknown function DUF81; KEGG: shn:Shewana3_3118 protein of unknown function DUF81
YP_001759696.1	KEGG: saz:Sama_0941 type IV pilus assembly protein PilM
YP_001759697.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_2937 methyl-accepting chemotaxis sensory transducer
YP_001759698.1	PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; glycoside hydrolase family 20 domain protein; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: sse:Ssed_1211 beta-N-acetylhexosaminidase
YP_001759699.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sse:Ssed_1212 ATPase, BadF/BadG/BcrA/BcrD type
YP_001759700.1	KEGG: sse:Ssed_1213 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_001759701.1	KEGG: sse:Ssed_1214 hypothetical protein
YP_001759702.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1215 glucose/galactose transporter
YP_001759703.1	PFAM: cytochrome B561; KEGG: sse:Ssed_1216 cytochrome b561
YP_001759704.1	PFAM: YceI family protein; KEGG: sse:Ssed_1217 YceI family protein
YP_001759705.1	PFAM: Fe(II) trafficking protein YggX; KEGG: spl:Spea_1107 Fe(II) trafficking protein YggX
YP_001759706.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sse:Ssed_1219 A/G-specific adenine glycosylase
YP_001759707.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_001759708.1	PFAM: protein of unknown function DUF469; KEGG: slo:Shew_1125 protein of unknown function DUF469
YP_001759709.1	catalyzes the formation of glutamate from glutamine
YP_001759710.1	KEGG: sse:Ssed_1223 hypothetical protein
YP_001759711.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1224 carbonate dehydratase
YP_001759712.1	PFAM: protein of unknown function DUF885; KEGG: sse:Ssed_1225 protein of unknown function DUF885
YP_001759713.1	KEGG: sse:Ssed_1226 coproporphyrinogen dehydrogenase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001759714.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_001759715.1	KEGG: sse:Ssed_1228 hypothetical protein
YP_001759716.1	PFAM: protein of unknown function DUF167; KEGG: sse:Ssed_1229 protein of unknown function DUF167
YP_001759717.1	PFAM: protein of unknown function YGGT; KEGG: sse:Ssed_1230 protein of unknown function YGGT
YP_001759718.1	KEGG: sse:Ssed_1231 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: CoA-binding domain protein; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_001759719.1	PFAM: alanine racemase domain protein; KEGG: sse:Ssed_1232 alanine racemase domain protein
YP_001759720.1	KEGG: sse:Ssed_1233 twitching motility protein PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_001759721.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: sse:Ssed_1234 twitching motility protein
YP_001759722.1	PFAM: ferrochelatase; KEGG: sse:Ssed_1235 ferrochelatase
YP_001759723.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_001759724.1	PFAM: protein of unknown function DUF179; KEGG: sse:Ssed_1237 protein of unknown function DUF179
YP_001759725.1	involved in start site selection during the initiation of translation
YP_001759726.1	KEGG: sse:Ssed_1239 hypothetical protein
YP_001759727.1	KEGG: sse:Ssed_1240 hypothetical protein
YP_001759728.1	KEGG: sse:Ssed_1241 hypothetical protein
YP_001759729.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1242 transcriptional regulator, LysR family
YP_001759730.1	PFAM: transmembrane pair domain protein; KEGG: sse:Ssed_1243 hypothetical protein
YP_001759731.1	PFAM: OmpA/MotB domain protein; KEGG: sse:Ssed_1244 OmpA/MotB domain protein
YP_001759732.1	PFAM: MscS Mechanosensitive ion channel; KEGG: spl:Spea_1140 MscS mechanosensitive ion channel
YP_001759733.1	PFAM: protein of unknown function UPF0126; KEGG: sse:Ssed_1246 protein of unknown function UPF0126
YP_001759734.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sse:Ssed_1247 threonine aldolase
YP_001759735.1	KEGG: sse:Ssed_1248 hypothetical protein
YP_001759736.1	PFAM: Alkaline phosphatase; KEGG: sse:Ssed_1249 alkaline phosphatase
YP_001759737.1	PFAM: Alkaline phosphatase; KEGG: sse:Ssed_1250 alkaline phosphatase
YP_001759738.1	PFAM: BCCT transporter; KEGG: cvi:CV_4302 high-affinity choline transport protein
YP_001759739.1	KEGG: ava:Ava_5014 ABC-type phosphate/phosphonate transport system periplasmic component-like
YP_001759740.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_1251 thioesterase superfamily protein
YP_001759741.1	KEGG: sse:Ssed_1252 hypothetical protein
YP_001759742.1	KEGG: sse:Ssed_1254 hypothetical protein
YP_001759743.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_1255 efflux transporter, RND family, MFP subunit
YP_001759744.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: spl:Spea_1151 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
YP_001759745.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sse:Ssed_1257 putative cold shock-like protein
YP_001759746.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_1258 iron-containing alcohol dehydrogenase
YP_001759747.1	KEGG: sse:Ssed_1259 porin, gram-negative type
YP_001759748.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sse:Ssed_1260 YbaK/prolyl-tRNA synthetase associated region
YP_001759749.1	PFAM: protein of unknown function DUF88; KEGG: sse:Ssed_1261 protein of unknown function DUF88
YP_001759751.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1265 GCN5-related N-acetyltransferase
YP_001759752.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_1266 efflux transporter, RND family, MFP subunit
YP_001759753.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_1267 acriflavin resistance protein
YP_001759754.1	KEGG: shn:Shewana3_1087 undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase
YP_001759755.1	KEGG: son:SO_3476 hypothetical protein
YP_001759756.1	PFAM: protein of unknown function DUF419; KEGG: sse:Ssed_1268 protein of unknown function DUF419
YP_001759757.1	KEGG: cps:CPS_0516 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001759758.1	KEGG: pin:Ping_1949 hypothetical protein
YP_001759759.1	KEGG: vfi:VF1473 hypothetical protein
YP_001759760.1	PFAM: conserved hypothetical protein; KEGG: cps:CPS_0514 tryptophan-rich conserved hypothetical protein
YP_001759761.1	PFAM: metallophosphoesterase; KEGG: sse:Ssed_1269 metallophosphoesterase
YP_001759762.1	PFAM: beta-lactamase domain protein; KEGG: sus:Acid_3502 beta-lactamase domain protein
YP_001759765.1	PFAM: protein of unknown function DUF1568; KEGG: spl:Spea_2922 protein of unknown function DUF1568
YP_001759766.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_001759767.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_001759768.1	PFAM: ATP-cone domain protein; KEGG: sse:Ssed_1272 ribonucleotide reductase regulator NrdR-like protein
YP_001759769.1	KEGG: sse:Ssed_1273 diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein
YP_001759770.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001759771.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: sse:Ssed_1275 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_001759772.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_001759773.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_001759774.1	KEGG: sse:Ssed_1278 thiamine-phosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_001759775.1	PFAM: phosphatidylglycerophosphatase A; KEGG: sse:Ssed_1279 phosphatidylglycerophosphatase
YP_001759776.1	KEGG: mmw:Mmwyl1_4226 hypothetical protein
YP_001759777.1	catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate
YP_001759778.1	catalyzes the formation of acetyl-CoA from acetalaldehyde
YP_001759779.1	PFAM: Hydratase/decarboxylase; KEGG: ajs:Ajs_0222 4-oxalocrotonate decarboxylase
YP_001759780.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sus:Acid_2184 transcriptional regulator, LysR family
YP_001759781.1	KEGG: pat:Patl_1035 peptidase S8 and S53, subtilisin, kexin, sedolisin; TIGRFAM: conserved repeat domain protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; proteinase inhibitor I9 subtilisin propeptide
YP_001759782.1	PFAM: protein of unknown function DUF1697; KEGG: cps:CPS_1661 hypothetical protein
YP_001759783.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pha:PSHAa1237 transporter protein
YP_001759784.1	KEGG: vha:VIBHAR_06851 hypothetical protein
YP_001759785.1	KEGG: cps:CPS_2707 putative lipoprotein
YP_001759786.1	SMART: Fibronectin type III domain protein
YP_001759787.1	KEGG: pha:PSHAa2221 hypothetical protein
YP_001759789.1	KEGG: bbr:BB4423 putative esterase
YP_001759790.1	PFAM: tryptophan 23-dioxygenase; KEGG: spe:Spro_3022 tryptophan 23-dioxygenase
YP_001759791.1	PFAM: monooxygenase FAD-binding; KEGG: cps:CPS_3582 monooxygenase family protein
YP_001759792.1	TIGRFAM: kynureninase; KEGG: fps:FP2215 kynureninase
YP_001759793.1	PFAM: Hydratase/decarboxylase; KEGG: swi:Swit_0912 4-oxalocrotonate decarboxylase
YP_001759794.1	PFAM: amidohydrolase 2; KEGG: aba:Acid345_0682 tryptophan 2,3-dioxygenase
YP_001759795.1	catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde in the final enzymatic step of quinolinate biosynthesis
YP_001759796.1	PFAM: Endoribonuclease L-PSP; KEGG: reu:Reut_B5501 endoribonuclease L-PSP
YP_001759797.1	TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: pol:Bpro_5132 aldehyde dehydrogenase
YP_001759798.1	PFAM: sodium:neurotransmitter symporter; KEGG: pat:Patl_1994 sodium:neurotransmitter symporter
YP_001759799.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_3218 putative TonB-dependent receptor for Fe
YP_001759800.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_1280 methylase involved in ubiquinone/menaquinone biosynthesis-like protein
YP_001759801.1	PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: net:Neut_1406 multicopper oxidase, type 3
YP_001759802.1	PFAM: cytochrome c class I; KEGG: nwi:Nwi_2649 cytochrome c, class IC
YP_001759803.1	KEGG: swi:Swit_1791 hypothetical protein
YP_001759804.1	PFAM: multicopper oxidase type 1; multicopper oxidase type 3; KEGG: net:Neut_1403 multicopper oxidase, type 3
YP_001759806.1	KEGG: vco:VC0395_0527 hypothetical protein
YP_001759807.1	TIGRFAM: PfaD family protein; KEGG: sse:Ssed_3205 2-nitropropane dioxygenase, NPD
YP_001759808.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: sse:Ssed_3204 omega-3 polyunsaturated fatty acid synthase PfaC
YP_001759809.1	TIGRFAM: PfaB family protein; KEGG: sse:Ssed_3203 omega-3 polyunsaturated fatty acid synthase PfaB
YP_001759810.1	KEGG: sse:Ssed_3202 erythronolide synthase; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase
YP_001759811.1	KEGG: sse:Ssed_3201 transcriptional regulator, putative
YP_001759813.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_3760 TonB-dependent receptor
YP_001759814.1	KEGG: cps:CPS_3134 hypothetical protein
YP_001759815.1	KEGG: sse:Ssed_3198 hypothetical protein
YP_001759816.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_3197 hypothetical protein
YP_001759817.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_3196 hypothetical protein
YP_001759818.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB1124 putative ABC transporter, ATP-binding protein
YP_001759819.1	KEGG: sse:Ssed_3194 hypothetical protein
YP_001759820.1	KEGG: sse:Ssed_2401 zinc carboxypeptidase-related protein
YP_001759821.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_3503 TonB-dependent receptor
YP_001759822.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cps:CPS_0978 transcription regulator, LacI family
YP_001759823.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cps:CPS_0979 putative beta-phosphoglucomutase
YP_001759824.1	PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: cps:CPS_0980 glycosyl hydrolase, family 65
YP_001759825.1	PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_0981 hypothetical protein
YP_001759826.1	PFAM: leucine-rich repeat protein; Leucine-rich repeat 2 protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: spl:Spea_2938 serine/threonine protein kinase
YP_001759827.1	KEGG: vei:Veis_3762 hypothetical protein
YP_001759828.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sse:Ssed_1347 glutathione-regulated potassium-efflux system protein KefC
YP_001759829.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sse:Ssed_1348 putative NAD(P)H oxidoreductase
YP_001759830.1	PFAM: PhnA protein; KEGG: sse:Ssed_1349 putative PhnA protein
YP_001759831.1	PFAM: protein of unknown function DUF188; KEGG: sse:Ssed_1350 protein of unknown function DUF188
YP_001759832.1	PFAM: PfkB domain protein; Helix-turn-helix type 11 domain protein; KEGG: sse:Ssed_1351 PfkB domain protein
YP_001759833.1	PFAM: Indigoidine synthase A family protein; KEGG: sse:Ssed_1352 indigoidine synthase A family protein
YP_001759834.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sdn:Sden_1582 glutathione-dependent formaldehyde-activating, GFA
YP_001759835.1	KEGG: pat:Patl_1853 hypothetical protein
YP_001759836.1	PFAM: sodium/glutamate symporter; KEGG: sse:Ssed_1355 sodium-glutamate symporter
YP_001759837.1	PFAM: UspA domain protein; KEGG: ppr:PBPRB0171 hypothetical universal stress protein A
YP_001759838.1	KEGG: sse:Ssed_1359 hypothetical protein
YP_001759839.1	KEGG: slo:Shew_2719 hypothetical protein
YP_001759840.1	TIGRFAM: YD repeat protein; KEGG: sdn:Sden_0132 YD repeat
YP_001759841.1	KEGG: sdn:Sden_0133 hypothetical protein
YP_001759845.1	KEGG: sde:Sde_3015 hypothetical protein
YP_001759847.1	KEGG: sdn:Sden_0148 hypothetical protein
YP_001759848.1	KEGG: vha:VIBHAR_p08183 hypothetical protein
YP_001759849.1	KEGG: vha:VIBHAR_01970 hypothetical protein
YP_001759850.1	KEGG: vha:VIBHAR_07066 hypothetical protein
YP_001759851.1	KEGG: vha:VIBHAR_02042 hypothetical protein
YP_001759852.1	KEGG: sde:Sde_3244 triosephosphate isomerase
YP_001759860.1	KEGG: sdn:Sden_0143 hypothetical protein
YP_001759861.1	KEGG: vha:VIBHAR_02042 hypothetical protein
YP_001759863.1	KEGG: bpm:BURPS1710b_1277 possible adhesin/hemolysin
YP_001759864.1	KEGG: btr:Btr_0394 filamentous hemagglutinin
YP_001759865.1	KEGG: sbm:Shew185_1537 hypothetical protein
YP_001759866.1	KEGG: son:SO_4037 hypothetical protein
YP_001759867.1	PFAM: protein of unknown function DUF1568; KEGG: saz:Sama_3122 transposase
YP_001759868.1	KEGG: vha:VIBHAR_02054 hypothetical protein
YP_001759871.1	KEGG: sdn:Sden_0141 hypothetical protein
YP_001759873.1	KEGG: vha:VIBHAR_07071 hypothetical protein
YP_001759875.1	KEGG: vha:VIBHAR_07070 hypothetical protein
YP_001759876.1	KEGG: sdn:Sden_0142 hypothetical protein
YP_001759877.1	KEGG: vha:VIBHAR_02045 hypothetical protein
YP_001759878.1	KEGG: sse:Ssed_1362 anti-ECFsigma factor, ChrR
YP_001759879.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_1363 oxidoreductase, short-chain dehydrogenase/reductase family
YP_001759880.1	PFAM: helix-turn-helix HxlR type; KEGG: sse:Ssed_1364 hypothetical protein
YP_001759881.1	PFAM: permease; KEGG: vfi:VFA0175 hypothetical membrane spanning protein
YP_001759882.1	PFAM: regulatory protein ArsR; KEGG: ppr:PBPRA2744 hypothetical transcriptional regulator, ArsR family
YP_001759883.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; protease-associated PA domain protein; peptidase domain protein; KEGG: sbn:Sbal195_2959 protease-associated PA domain protein
YP_001759884.1	KEGG: bbr:BB2475 hypothetical protein
YP_001759885.1	KEGG: saz:Sama_2689 hypothetical protein
YP_001759886.1	PFAM: regulatory protein MarR; KEGG: saz:Sama_2690 transcriptional regulator, MarR family
YP_001759887.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_001759888.1	KEGG: sfr:Sfri_0202 hypothetical protein
YP_001759889.1	KEGG: sfr:Sfri_0203 hypothetical protein
YP_001759890.1	PFAM: PepSY-associated TM helix domain protein; KEGG: sfr:Sfri_0204 PepSY-associated TM helix domain protein
YP_001759891.1	KEGG: sse:Ssed_1367 putative lipoprotein
YP_001759892.1	KEGG: sse:Ssed_1368 conserved hypothetical cytosolic protein
YP_001759893.1	KEGG: sdn:Sden_2617 hypothetical protein
YP_001759894.1	KEGG: slo:Shew_1243 peptidyl-Lys metalloendopeptidase
YP_001759895.1	KEGG: sse:Ssed_1381 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001759896.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: sse:Ssed_1382 response regulator receiver protein
YP_001759897.1	PFAM: response regulator receiver; KEGG: sse:Ssed_1383 response regulator containing a CheY-like protein receiver domain and a GGDEF domain-like protein
YP_001759898.1	KEGG: sse:Ssed_1384 hypothetical protein
YP_001759899.1	PFAM: OsmC family protein; KEGG: sse:Ssed_1386 OsmC family protein
YP_001759900.1	PFAM: DoxX family protein; KEGG: vfi:VFA0336 hypothetical membrane spanning protein
YP_001759901.1	PFAM: CBS domain containing protein; KEGG: spl:Spea_1244 CBS domain containing protein
YP_001759902.1	KEGG: vha:VIBHAR_02478 hypothetical protein
YP_001759903.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_001759904.1	PFAM: cyclase/dehydrase; KEGG: sse:Ssed_1408 cyclase/dehydrase
YP_001759905.1	PFAM: protein of unknown function UPF0125; KEGG: sse:Ssed_1409 protein of unknown function UPF0125
YP_001759906.1	PFAM: SmpA/OmlA domain protein; KEGG: sse:Ssed_1410 SmpA/OmlA domain protein
YP_001759907.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sse:Ssed_1411 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_001759908.1	KEGG: sse:Ssed_1412 hypothetical protein
YP_001759909.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1413 diguanylate cyclase
YP_001759910.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1413 diguanylate cyclase
YP_001759911.1	PFAM: malate synthase; KEGG: sse:Ssed_1414 malate synthase
YP_001759912.1	PFAM: GAF domain protein; Metal-dependent hydrolase HDOD; KEGG: sse:Ssed_1416 putative signal transduction protein
YP_001759913.1	KEGG: sse:Ssed_1417 hypothetical protein
YP_001759914.1	PFAM: protein of unknown function DUF980; KEGG: sse:Ssed_1418 protein of unknown function DUF980
YP_001759915.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1419 diguanylate cyclase
YP_001759916.1	PFAM: extracellular solute-binding protein family 1; KEGG: sse:Ssed_1420 extracellular solute-binding protein, family 1
YP_001759917.1	KEGG: sse:Ssed_1421 transcriptional regulator, CopG family
YP_001759918.1	KEGG: sse:Ssed_1422 hypothetical protein
YP_001759919.1	KEGG: sse:Ssed_1423 hypothetical protein
YP_001759920.1	KEGG: sse:Ssed_1424 NrfJ-related protein
YP_001759921.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1425 GCN5-related N-acetyltransferase
YP_001759922.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sse:Ssed_1427 5'-nucleotidase
YP_001759923.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: sse:Ssed_1428 protein of unknown function DUF21
YP_001759924.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_001759925.1	KEGG: sse:Ssed_1430 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001759926.1	KEGG: sse:Ssed_1431 hypothetical protein
YP_001759927.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_001759928.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_001759929.1	PFAM: Tetratricopeptide TPR_4; KEGG: sse:Ssed_1434 tetratricopeptide TPR_4
YP_001759930.1	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis
YP_001759931.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_001759932.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pin:Ping_2637 methyltransferase type 12
YP_001759933.1	KEGG: hch:HCH_03986 hypothetical protein
YP_001759934.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sse:Ssed_1052 glutathione-dependent formaldehyde-activating, GFA
YP_001759935.1	KEGG: vvy:VV1909 hypothetical protein
YP_001759936.1	KEGG: mbn:Mboo_1713 hypothetical protein
YP_001759937.1	KEGG: vfi:VFA0631 hypothetical protein
YP_001759939.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_001759940.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_001759941.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_001759942.1	PFAM: acyltransferase 3; KEGG: hch:HCH_04941 predicted acyltransferase
YP_001759943.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sse:Ssed_3121 cytidine/deoxycytidylate deaminase family protein
YP_001759944.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_001759945.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_001759946.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sse:Ssed_3118 cytochrome bd ubiquinol oxidase, subunit I
YP_001759947.1	KEGG: sse:Ssed_3117 alkaline phosphatase; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_001759948.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: slo:Shew_1304 cyd operon protein YbgT
YP_001759949.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_3114 methyl-accepting chemotaxis sensory transducer
YP_001759950.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_3113 acriflavin resistance protein
YP_001759951.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_3112 efflux transporter, RND family, MFP subunit
YP_001759952.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_3111 transcriptional regulator, TetR family
YP_001759953.1	KEGG: sse:Ssed_3110 hypothetical protein
YP_001759954.1	KEGG: sse:Ssed_3109 hypothetical protein
YP_001759955.1	KEGG: sse:Ssed_3108 hypothetical protein
YP_001759956.1	KEGG: sse:Ssed_3107 protein of unknown function DUF115
YP_001759957.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: sse:Ssed_3106 acetyltransferase
YP_001759958.1	KEGG: sse:Ssed_3105 flagellin modification protein A
YP_001759959.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: sse:Ssed_3104 N-acylneuraminate cytidylyltransferase
YP_001759960.1	PFAM: oxidoreductase domain protein; KEGG: sse:Ssed_3103 dehydrogenase
YP_001759961.1	PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: sse:Ssed_3102 mannose-1-phosphate guanyltransferase
YP_001759962.1	KEGG: sse:Ssed_3101 sialic acid biosynthesis protein NeuD
YP_001759963.1	PFAM: N-acetylneuraminic acid synthase domain; KEGG: sse:Ssed_3100 N-acylneuraminate-9-phosphate synthase
YP_001759964.1	PFAM: LmbE family protein; KEGG: sru:SRU_0604 hypothetical protein
YP_001759965.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ckl:CKL_2470 predicted polysialic acid biosynthesis protein
YP_001759966.1	KEGG: ckl:CKL_2471 hypothetical protein
YP_001759967.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sse:Ssed_3098 UDP-bacillosamine synthetase
YP_001759968.1	PFAM: polysaccharide biosynthesis protein CapD; KEGG: sse:Ssed_3097 nucleoside-diphosphate sugar epimerase
YP_001759969.1	KEGG: sse:Ssed_3096 hypothetical protein
YP_001759970.1	PFAM: GSCFA domain protein; KEGG: sse:Ssed_3095 hypothetical protein
YP_001759971.1	KEGG: sse:Ssed_3094 hypothetical protein
YP_001759972.1	PFAM: protein of unknown function DUF400; KEGG: sse:Ssed_3093 protein of unknown function DUF400
YP_001759973.1	PFAM: FlgN family protein; KEGG: sse:Ssed_3092 FlgN family protein
YP_001759974.1	PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: sse:Ssed_3091 anti-sigma-28 factor, FlgM
YP_001759975.1	required for the assembly of the flagellar basal body P-ring
YP_001759976.1	PFAM: response regulator receiver; CheW domain protein; KEGG: slo:Shew_1343 response regulator receiver modulated CheW protein
YP_001759977.1	PFAM: MCP methyltransferase CheR-type; KEGG: sse:Ssed_3088 protein-glutamate O-methyltransferase
YP_001759978.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod
YP_001759979.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_001759980.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production
YP_001759981.1	the hook connects flagellar basal body to the flagellar filament
YP_001759982.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_001759983.1	makes up the distal portion of the flagellar basal body rod
YP_001759984.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001759985.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_001759986.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_001759987.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK
YP_001759988.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.
YP_001759989.1	PFAM: flagellin domain protein; KEGG: sse:Ssed_3076 flagellin
YP_001759990.1	PFAM: flagellin domain protein; KEGG: sse:Ssed_3075 flagellin
YP_001759991.1	PFAM: flagellar protein FlaG protein; KEGG: sse:Ssed_3074 flagellar protein FlaG protein
YP_001759992.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: sse:Ssed_3073 flagellar hook-associated 2 domain protein
YP_001759993.1	KEGG: sse:Ssed_3072 hypothetical protein
YP_001759994.1	flagellin specific chaperone
YP_001759995.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: sse:Ssed_3070 sigma54 specific transcriptional regulator, fis family
YP_001759996.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: sse:Ssed_3069 PAS/PAC sensor signal transduction histidine kinase
YP_001759997.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sse:Ssed_3068 two component, sigma54 specific, transcriptional regulator, fis family
YP_001759998.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sse:Ssed_3067 flagellar hook-basal body complex subunit FliE
YP_001759999.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_001760000.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001760001.1	PFAM: flagellar assembly protein FliH; KEGG: sse:Ssed_3064 flagellar assembly protein FliH
YP_001760002.1	involved in type III protein export during flagellum assembly
YP_001760003.1	TIGRFAM: flagellar export protein FliJ; KEGG: sse:Ssed_3062 flagellar export protein FliJ
YP_001760004.1	PFAM: flagellar hook-length control protein; KEGG: sse:Ssed_3061 flagellar hook-length control protein
YP_001760005.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_001760006.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_001760007.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_001760008.1	PFAM: flagellar biosynthesis protein FliO; KEGG: sse:Ssed_3057 flagellar biosynthesis protein, FliO
YP_001760009.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_001760010.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: sse:Ssed_3055 flagellar biosynthetic protein FliQ
YP_001760011.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_001760012.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_001760013.1	membrane protein involved in the flagellar export apparatus
YP_001760014.1	positive regulator of class III flagellar genes
YP_001760015.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sse:Ssed_3050 cobyrinic acid a,c-diamide synthase
YP_001760016.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_001760017.1	PFAM: response regulator receiver; KEGG: sse:Ssed_3048 response regulator receiver protein
YP_001760018.1	PFAM: Chemotaxis phosphatase CheZ; KEGG: sse:Ssed_3047 chemotaxis phosphatase, CheZ
YP_001760019.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sse:Ssed_3046 CheA signal transduction histidine kinase
YP_001760020.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_001760021.1	KEGG: sse:Ssed_3044 hypothetical protein
YP_001760022.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sse:Ssed_3043 cobyrinic acid a,c-diamide synthase
YP_001760023.1	PFAM: CheW domain protein; KEGG: sse:Ssed_3042 CheW protein
YP_001760024.1	PFAM: CheW domain protein; KEGG: sse:Ssed_3041 CheW protein
YP_001760025.1	KEGG: sse:Ssed_3040 hypothetical protein
YP_001760026.1	KEGG: sse:Ssed_3039 FlhB domain protein
YP_001760027.1	KEGG: sse:Ssed_3038 hypothetical protein
YP_001760028.1	PFAM: VacJ family lipoprotein; KEGG: sse:Ssed_3037 surface lipoprotein-like protein
YP_001760029.1	PFAM: response regulator receiver; KEGG: sse:Ssed_3036 response regulator receiver protein
YP_001760030.1	KEGG: slo:Shew_1397 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1
YP_001760031.1	TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: spl:Spea_1394 transcriptional acivator RfaH
YP_001760032.1	PFAM: polysaccharide export protein; KEGG: spl:Spea_1395 polysaccharide export protein
YP_001760033.1	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown
YP_001760034.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: slo:Shew_1400 lipopolysaccharide biosynthesis protein
YP_001760035.1	TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: son:SO_3190 polysaccharide biosynthesis protein
YP_001760036.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: son:SO_3189 polysaccharide biosynthesis protein
YP_001760037.1	PFAM: glycosyl transferase group 1; KEGG: bth:BT_0392 lipopolysaccharide biosynthesis RfbU-related protein
YP_001760038.1	KEGG: eba:ebA5878 hypothetical protein
YP_001760039.1	KEGG: eba:ebA5880 hypothetical protein
YP_001760040.1	PFAM: virulence factor MVIN family protein; KEGG: cth:Cthe_2636 integral membrane protein MviN
YP_001760041.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: pin:Ping_0789 fused dTDP-4-dehydrorhamnose reductase and 3-beta hydroxysteroid dehydrogenase/isomerase
YP_001760042.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: pin:Ping_0790 dTDP-4-dehydrorhamnose reductase
YP_001760043.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: pin:Ping_0791 UDP-N-acetylglucosamine 2-epimerase
YP_001760044.1	PFAM: glycosyl transferase group 1; KEGG: smd:Smed_4567 glycosyl transferase group 1
YP_001760045.1	PFAM: sugar transferase; KEGG: sdn:Sden_2648 undecaprenyl-phosphate galactosephosphotransferase
YP_001760046.1	KEGG: pst:PSPTO_1915 bacterial transferase, hexapeptide repeat protein
YP_001760047.1	PFAM: phosphopantetheine-binding; KEGG: vha:VIBHAR_00674 hypothetical protein
YP_001760048.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bpd:BURPS668_3877 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_001760049.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: slo:Shew_1326 short-chain dehydrogenase/reductase SDR
YP_001760050.1	PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: vha:VIBHAR_00675 3-oxoacyl-(acyl-carrier protein) synthase
YP_001760051.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: vvy:VV0363 pilin glycosylation protein
YP_001760052.1	programmed frameshift; PFAM: transposase IS3/IS911 family protein; KEGG: sse:Ssed_2459 ISxac3 transposase
YP_001760053.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: cno:NT01CX_1554 alginate O-acetylation protein
YP_001760055.1	KEGG: sfu:Sfum_1625 hypothetical protein
YP_001760057.1	KEGG: sde:Sde_0798 hypothetical protein; TIGRFAM: conserved repeat domain protein; PFAM: Ig family protein; FG-GAP repeat protein; SMART: Dystroglycan-type cadherin domain protein
YP_001760058.1	PFAM: ASPIC/UnbV domain protein; SMART: Integrin alpha beta-propellor repeat protein; KEGG: gfo:GFO_1031 secreted protein containing FG-GAP repeats
YP_001760059.1	PFAM: protein of unknown function DUF255; KEGG: hch:HCH_06582 highly conserved protein containing a thioredoxin domain
YP_001760060.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: sbl:Sbal_2876 polysaccharide biosynthesis protein CapD
YP_001760061.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sse:Ssed_3013 glucose-1-phosphate thymidylyltransferase
YP_001760062.1	KEGG: sse:Ssed_0108 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_001760063.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sse:Ssed_0107 dTDP-glucose 4,6-dehydratase
YP_001760064.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: sse:Ssed_0106 dTDP-4-dehydrorhamnose reductase
YP_001760065.1	PFAM: protein of unknown function DUF1568; KEGG: mmw:Mmwyl1_0788 protein of unknown function DUF1568
YP_001760066.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_001760067.1	KEGG: sse:Ssed_2987 sulfate adenylyltransferase; TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_001760068.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sse:Ssed_2959 TrkA-C domain protein
YP_001760069.1	PFAM: adenylylsulfate kinase; KEGG: sse:Ssed_2957 adenylyl-sulfate kinase
YP_001760070.1	KEGG: sse:Ssed_2984 acetyltransferase
YP_001760071.1	PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sse:Ssed_2954 poly(glycerophosphate) glycerophosphotransferase
YP_001760072.1	KEGG: sse:Ssed_2953 glycerol-3-phosphate cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase
YP_001760073.1	KEGG: sse:Ssed_2952 nucleotidyl transferase
YP_001760074.1	KEGG: sse:Ssed_2951 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF
YP_001760075.1	PFAM: glycosyl transferase family 2; KEGG: sse:Ssed_2950 glycosyl transferase, family 2
YP_001760076.1	PFAM: polysaccharide biosynthesis protein; KEGG: sse:Ssed_2949 polysaccharide biosynthesis protein
YP_001760077.1	KEGG: sse:Ssed_2948 hypothetical protein
YP_001760078.1	KEGG: sse:Ssed_2947 hypothetical protein
YP_001760079.1	PFAM: polysaccharide export protein; KEGG: sse:Ssed_2946 polysaccharide export protein
YP_001760080.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sse:Ssed_2945 anti-sigma-factor antagonist
YP_001760081.1	KEGG: sse:Ssed_2944 putative anti-sigma regulatory factor, serine/threonine protein kinase
YP_001760082.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sse:Ssed_2943 response regulator receiver modulated serine phosphatase
YP_001760083.1	KEGG: sse:Ssed_2942 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001760084.1	KEGG: sse:Ssed_2941 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001760085.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sse:Ssed_2940 two component, sigma54 specific, transcriptional regulator, fis family
YP_001760086.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sse:Ssed_2939 PHP C-terminal domain protein
YP_001760087.1	KEGG: spl:Spea_1438 conserved hypothetical protein
YP_001760088.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_001760089.1	PFAM: protein of unknown function DUF218; KEGG: sse:Ssed_2936 protein of unknown function DUF218
YP_001760090.1	KEGG: sse:Ssed_2935 hypothetical protein
YP_001760091.1	PFAM: protein of unknown function DUF583; KEGG: sse:Ssed_2934 protein of unknown function DUF583
YP_001760092.1	TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_2933 ferredoxin-type protein NapF
YP_001760093.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sse:Ssed_2932 UDP-glucose 4-epimerase
YP_001760094.1	KEGG: sse:Ssed_2931 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_001760095.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_001760096.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_001760097.1	PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sse:Ssed_2928 transcriptional regulator, TyrR
YP_001760098.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sse:Ssed_2927 fumarylacetoacetate (FAA) hydrolase
YP_001760099.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: sse:Ssed_2926 response regulator receiver protein
YP_001760100.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_2914 transcriptional regulator, LysR family
YP_001760101.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_2913 major facilitator superfamily MFS_1
YP_001760102.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sse:Ssed_2912 two component, sigma54 specific, transcriptional regulator, fis family
YP_001760103.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_2911 ATP-binding region, ATPase domain protein
YP_001760104.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sse:Ssed_2910 TRAP dicarboxylate transporter, DctM subunit
YP_001760105.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sse:Ssed_2909 tripartite ATP-independent periplasmic transporter, DctQ component
YP_001760106.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sse:Ssed_2908 TRAP dicarboxylate transporter, DctP subunit
YP_001760107.1	KEGG: sse:Ssed_2907 hypothetical protein
YP_001760108.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_001760109.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VF1378 transcriptional regulators, LysR family
YP_001760110.1	KEGG: shn:Shewana3_2526 hypothetical protein
YP_001760111.1	PFAM: protein of unknown function DUF1445; KEGG: vfi:VF1377 hypothetical protein
YP_001760112.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bbr:BB3002 putative transport protein
YP_001760114.1	KEGG: bpt:Bpet2229 hypothetical protein
YP_001760115.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: bpt:Bpet2230 putative membrane protein (TRAP-type transport system, large permease component)
YP_001760116.1	PFAM: LamB/YcsF family protein; KEGG: vha:VIBHAR_05795 hypothetical protein
YP_001760117.1	PFAM: Allophanate hydrolase subunit 1; KEGG: vfi:VF1375 kinase autophosphorylation inhibitor KipI
YP_001760118.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: mmw:Mmwyl1_0359 UreA amidolyase related protein
YP_001760119.1	PFAM: sodium pump decarboxylase gamma subunit; KEGG: pin:Ping_3377 sodium pump decarboxylases, gamma subunit
YP_001760120.1	PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: pat:Patl_3012 oxaloacetate decarboxylase alpha subunit
YP_001760121.1	KEGG: pin:Ping_3375 oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_001760122.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_2905 ABC transporter-related protein
YP_001760123.1	PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sse:Ssed_2904 transcriptional regulator, AraC family
YP_001760124.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sse:Ssed_2903 methylated-DNA--(protein)-cysteine S-methyltransferase
YP_001760125.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_2902 DEAD/DEAH box helicase domain protein
YP_001760126.1	PFAM: Dual specificity protein phosphatase; KEGG: sse:Ssed_2901 dual specificity protein phosphatase
YP_001760127.1	PFAM: response regulator receiver; CheW domain protein; KEGG: sse:Ssed_2899 response regulator receiver modulated CheW protein
YP_001760128.1	involved in the import of serine and threonine coupled with the import of sodium
YP_001760129.1	PFAM: oxidoreductase domain protein; KEGG: spl:Spea_1465 oxidoreductase domain protein
YP_001760130.1	KEGG: sse:Ssed_2897 hypothetical protein
YP_001760131.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_2896 pseudouridine synthase
YP_001760132.1	PFAM: Arylsulfotransferase; KEGG: spl:Spea_4027 arylsulfotransferase
YP_001760133.1	PFAM: protein of unknown function DUF479; KEGG: sse:Ssed_2895 protein of unknown function DUF479
YP_001760134.1	KEGG: sse:Ssed_2894 hypothetical protein
YP_001760135.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_001760136.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_001760137.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_001760138.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_001760139.1	KEGG: sse:Ssed_2888 hypothetical protein
YP_001760140.1	PFAM: Rhodanese domain protein; KEGG: sse:Ssed_2887 rhodanese-like protein
YP_001760141.1	TIGRFAM: siroheme synthase; KEGG: sse:Ssed_2886 precorrin-2 oxidase / ferrochelatase
YP_001760142.1	PFAM: YaeQ family protein; KEGG: sse:Ssed_2885 YaeQ family protein
YP_001760143.1	PFAM: carbon starvation protein CstA; KEGG: sse:Ssed_2884 carbon starvation protein CstA
YP_001760144.1	unknown function; when overproduced it confers drug-resistance
YP_001760145.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: sse:Ssed_2882 signal transduction histidine kinase, LytS
YP_001760146.1	KEGG: sse:Ssed_2881 hypothetical protein
YP_001760147.1	KEGG: sse:Ssed_2880 RepA domain protein
YP_001760148.1	KEGG: sse:Ssed_2879 hypothetical protein
YP_001760149.1	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_2878 type IV pilus assembly PilZ
YP_001760150.1	PFAM: phosphate-starvation-inducible E; KEGG: sse:Ssed_2877 phosphate-starvation-inducible E
YP_001760151.1	PFAM: inositol monophosphatase; KEGG: sse:Ssed_2875 inositol-phosphate phosphatase
YP_001760152.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sse:Ssed_2874 RNA methyltransferase, TrmH family, group 1
YP_001760153.1	TIGRFAM: serine O-acetyltransferase; KEGG: sse:Ssed_2873 serine O-acetyltransferase
YP_001760154.1	TIGRFAM: transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: sse:Ssed_2872 transcriptional regulator, BadM/Rrf2 family
YP_001760155.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_001760156.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: sse:Ssed_2870 FeS cluster assembly scaffold IscU
YP_001760157.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: slo:Shew_2315 iron-sulfur cluster assembly protein IscA
YP_001760158.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_001760159.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_001760160.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: spl:Spea_1493 ferredoxin, 2Fe-2S type, ISC system
YP_001760161.1	TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: sse:Ssed_2863 hypothetical protein
YP_001760162.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_001760163.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_2861 TonB-dependent receptor
YP_001760164.1	KEGG: sse:Ssed_2860 transcriptional regulator, TraR/DksA family
YP_001760165.1	PFAM: dihydrouridine synthase DuS; KEGG: sse:Ssed_2859 dihydrouridine synthase, DuS
YP_001760166.1	KEGG: spl:Spea_1502 conserved hypothetical protein
YP_001760167.1	PFAM: protein of unknown function DUF692; KEGG: sse:Ssed_2857 protein of unknown function DUF692
YP_001760168.1	KEGG: sse:Ssed_2856 hypothetical protein
YP_001760169.1	KEGG: sfr:Sfri_2410 hypothetical protein
YP_001760170.1	PFAM: protein of unknown function DUF454; KEGG: sse:Ssed_2854 protein of unknown function DUF454
YP_001760171.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_001760172.1	KEGG: sse:Ssed_2852 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_001760173.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_2851 hypothetical protein
YP_001760174.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_001760175.1	molecular chaperone
YP_001760176.1	PFAM: Thioredoxin domain; KEGG: sse:Ssed_2848 thioredoxin domain protein
YP_001760177.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_001760178.1	PFAM: PfkB domain protein; KEGG: sse:Ssed_2845 inosine kinase
YP_001760179.1	PFAM: sodium:dicarboxylate symporter; KEGG: sse:Ssed_2844 sodium:dicarboxylate symporter
YP_001760180.1	KEGG: sse:Ssed_2843 Ig domain protein, group 1 domain protein
YP_001760181.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_001760182.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_001760183.1	KEGG: sse:Ssed_2840 hypothetical protein
YP_001760184.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation
YP_001760185.1	KEGG: sse:Ssed_2838 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_001760186.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_001760187.1	PFAM: protein of unknown function UPF0227; KEGG: sse:Ssed_2836 protein of unknown function UPF0227
YP_001760188.1	catalyzes the hydrolysis of acylphosphate
YP_001760189.1	KEGG: sse:Ssed_2834 hypothetical protein
YP_001760190.1	KEGG: sse:Ssed_2833 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001760191.1	KEGG: sse:Ssed_2832 hypothetical protein
YP_001760192.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_2831 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_001760193.1	KEGG: sse:Ssed_2830 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_001760194.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_2829 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_001760195.1	PFAM: protein of unknown function DUF218; KEGG: spl:Spea_3336 protein of unknown function DUF218
YP_001760196.1	KEGG: slo:Shew_1636 hypothetical protein
YP_001760197.1	TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sse:Ssed_2827 DNA internalization-related competence protein ComEC/Rec2
YP_001760198.1	KEGG: sse:Ssed_2826 ABC transporter, ATP-binding protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001760199.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_001760200.1	PFAM: protein of unknown function DUF343; KEGG: sse:Ssed_2824 protein of unknown function DUF343
YP_001760201.1	KEGG: slo:Shew_1641 Mn2+-dependent serine/threonine protein kinase
YP_001760202.1	PFAM: heat shock protein DnaJ domain protein; KEGG: shw:Sputw3181_2394 heat shock protein DnaJ domain protein
YP_001760203.1	KEGG: sbn:Sbal195_1867 hypothetical protein
YP_001760204.1	KEGG: son:SO_1848 hypothetical protein
YP_001760205.1	KEGG: shn:Shewana3_1597 hypothetical protein
YP_001760206.1	PFAM: beta-lactamase domain protein; KEGG: sse:Ssed_2823 beta-lactamase domain protein
YP_001760207.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_2822 acriflavin resistance protein
YP_001760208.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_2821 acriflavin resistance protein
YP_001760209.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_2820 efflux transporter, RND family, MFP subunit
YP_001760210.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_3557 GCN5-related N-acetyltransferase
YP_001760211.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_001760212.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sse:Ssed_2818 succinate dehydrogenase, cytochrome b subunit
YP_001760213.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: spl:Spea_1785 succinate dehydrogenase hydrophobic membrane anchor
YP_001760214.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_001760215.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_001760216.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_001760217.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sse:Ssed_2813 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase
YP_001760218.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_001760219.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: sse:Ssed_2811 succinyl-CoA synthetase, alpha subunit
YP_001760220.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: slo:Shew_1659 ferredoxin-dependent glutamate synthase
YP_001760221.1	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer
YP_001760222.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_001760223.1	KEGG: sse:Ssed_2808 hypothetical protein
YP_001760224.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: spl:Spea_0257 substrate-binding region of ABC-type glycine betaine transport system
YP_001760225.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_4236 putative permease
YP_001760226.1	KEGG: sse:Ssed_4237 putative glycine betaine ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase
YP_001760227.1	KEGG: slo:Shew_3355 hypothetical protein
YP_001760228.1	KEGG: sse:Ssed_2807 hypothetical protein
YP_001760229.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spl:Spea_3423 GCN5-related N-acetyltransferase
YP_001760230.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_2806 GCN5-related N-acetyltransferase
YP_001760231.1	KEGG: spl:Spea_2203 conserved hypothetical protein
YP_001760232.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_001760233.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sse:Ssed_2802 cytosine permease/transport
YP_001760234.1	KEGG: spl:Spea_1311 hypothetical protein
YP_001760237.1	PFAM: protein kinase; TPR repeat-containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: cps:CPS_0999 serine/threonine protein kinase domain protein
YP_001760238.1	PFAM: Forkhead-associated protein; KEGG: cps:CPS_0998 FHA domain protein
YP_001760239.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_2799 nitrate reductase
YP_001760240.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_2798 aspartate carbamoyltransferase
YP_001760242.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: cps:CPS_2468 nitroreductase family protein
YP_001760243.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bth:BT_2380 putative oxidoreductase
YP_001760244.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: sse:Ssed_2777 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_001760245.1	KEGG: sse:Ssed_2776 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_001760246.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; aminotransferase class-III; KEGG: sse:Ssed_2775 8-amino-7-oxononanoate synthase
YP_001760247.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_2774 biotin biosynthesis protein BioC
YP_001760248.1	TIGRFAM: dethiobiotin synthase; KEGG: sse:Ssed_2773 dethiobiotin synthase
YP_001760249.1	putative metalloprotease
YP_001760250.1	KEGG: sse:Ssed_2769 cytochrome c3
YP_001760251.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sse:Ssed_2768 uroporphyrin-III C-methyltransferase
YP_001760252.1	PFAM: glycosyl transferase family 3; KEGG: sse:Ssed_2767 glycosyl transferase, family 3
YP_001760253.1	KEGG: sse:Ssed_2766 response regulator with putative antiterminator output domain-like protein
YP_001760254.1	TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sse:Ssed_2765 nitrite reductase (NAD(P)H), large subunit
YP_001760255.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sse:Ssed_2764 nitrite reductase (NAD(P)H), small subunit
YP_001760256.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_2763 nitrite transporter
YP_001760257.1	PFAM: protein kinase; Protein phosphatase 2C-like; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: sse:Ssed_2762 serine/threonine protein kinase
YP_001760258.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sse:Ssed_2760 tetratricopeptide TPR_2 repeat protein
YP_001760259.1	PFAM: regulatory protein LuxR; KEGG: slo:Shew_1726 transcriptional regulator, LuxR family
YP_001760260.1	KEGG: sse:Ssed_2758 hypothetical protein
YP_001760261.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_2756 hypothetical protein
YP_001760262.1	PFAM: histidine triad (HIT) protein; KEGG: sse:Ssed_2755 histidine triad (HIT) protein
YP_001760263.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_2754 hypothetical protein
YP_001760264.1	PFAM: protein of unknown function DUF1425; KEGG: sse:Ssed_2753 protein of unknown function DUF1425
YP_001760265.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_2752 TonB-dependent receptor
YP_001760266.1	KEGG: sse:Ssed_2751 hypothetical protein
YP_001760267.1	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: sse:Ssed_2750 nicotinamide mononucleotide transporter PnuC
YP_001760268.1	PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: sse:Ssed_2749 aminoglycoside phosphotransferase
YP_001760269.1	PFAM: DoxX family protein; KEGG: sse:Ssed_2748 DoxX family protein
YP_001760270.1	PFAM: nitroreductase; KEGG: sse:Ssed_2747 nitroreductase
YP_001760271.1	PFAM: beta-lactamase domain protein; KEGG: sse:Ssed_2746 beta-lactamase domain protein
YP_001760272.1	KEGG: sse:Ssed_2745 methyl-accepting chemotaxis protein
YP_001760273.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_2744 GCN5-related N-acetyltransferase
YP_001760274.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_2743 GCN5-related N-acetyltransferase
YP_001760275.1	PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_1745 GCN5-related N-acetyltransferase
YP_001760276.1	KEGG: sse:Ssed_2742 hypothetical protein
YP_001760277.1	KEGG: sse:Ssed_2741 hypothetical protein
YP_001760278.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_2740 putative macrolide efflux ABC transporter, ATP-binding protein
YP_001760279.1	KEGG: sse:Ssed_2739 multidrug resistance efflux pump-like protein
YP_001760280.1	PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_2738 membrane-fusion protein
YP_001760281.1	KEGG: sse:Ssed_2737 membrane-fusion protein
YP_001760282.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_2736 ABC transporter permease protein
YP_001760283.1	KEGG: sse:Ssed_2735 hypothetical protein
YP_001760284.1	KEGG: sfr:Sfri_0069 hypothetical protein
YP_001760285.1	KEGG: sfr:Sfri_0070 hypothetical protein
YP_001760286.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sfr:Sfri_0071 TPR repeat-containing protein
YP_001760287.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: sse:Ssed_2728 hypothetical protein
YP_001760288.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: sse:Ssed_3630 OmpA domain protein transmembrane region-containing protein
YP_001760289.1	TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; KEGG: sse:Ssed_2701 anaerobic C4-dicarboxylate transporter
YP_001760290.1	PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: slo:Shew_2170 endonuclease/exonuclease/phosphatase
YP_001760291.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_2700 uncharacterized conserved protein UCP025560
YP_001760292.1	KEGG: sse:Ssed_2699 hypothetical protein
YP_001760293.1	KEGG: sse:Ssed_2698 hypothetical protein
YP_001760294.1	PFAM: Aldose 1-epimerase; KEGG: sse:Ssed_2697 aldose 1-epimerase
YP_001760295.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sse:Ssed_2696 acyl-CoA dehydrogenase domain protein
YP_001760296.1	PFAM: PEBP family protein; KEGG: spl:Spea_1246 PEBP family protein
YP_001760297.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_1247 transcriptional regulator, AraC family
YP_001760298.1	PFAM: protein of unknown function DUF938; KEGG: sse:Ssed_2693 protein of unknown function DUF938
YP_001760299.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_1517 GCN5-related N-acetyltransferase
YP_001760300.1	PFAM: OsmC family protein; KEGG: sse:Ssed_2063 hypothetical protein
YP_001760301.1	PFAM: helix-turn-helix domain protein
YP_001760304.1	KEGG: spl:Spea_4232 conserved hypothetical protein
YP_001760305.1	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate
YP_001760306.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sse:Ssed_2692 peptidyl-dipeptidase DCP
YP_001760307.1	KEGG: sse:Ssed_2691 Xaa-His dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20
YP_001760308.1	KEGG: sse:Ssed_2689 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_001760309.1	PFAM: protein of unknown function DUF482; KEGG: spl:Spea_1865 protein of unknown function DUF482
YP_001760310.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_2688 lysine exporter protein (LysE/YggA)
YP_001760311.1	KEGG: sse:Ssed_2687 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001760312.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_2686 transcriptional regulator, LysR family
YP_001760313.1	KEGG: sse:Ssed_2685 hypothetical protein
YP_001760314.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: sse:Ssed_2684 cytochrome-c peroxidase
YP_001760315.1	KEGG: sse:Ssed_2683 integral membrane protein TerC
YP_001760316.1	KEGG: sse:Ssed_2682 conserved hypothetical ABC transporter protein
YP_001760317.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pat:Patl_3926 carboxymuconolactone decarboxylase
YP_001760318.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mmw:Mmwyl1_3949 putative transcriptional regulator, GntR family
YP_001760319.1	PFAM: protein of unknown function DUF307; KEGG: sse:Ssed_2681 protein of unknown function DUF307
YP_001760320.1	KEGG: sse:Ssed_2680 hypothetical protein
YP_001760321.1	KEGG: sse:Ssed_2679 hypothetical protein
YP_001760322.1	PFAM: MscS Mechanosensitive ion channel; KEGG: slo:Shew_2145 MscS mechanosensitive ion channel
YP_001760323.1	PFAM: response regulator receiver; CheW domain protein; KEGG: sse:Ssed_2678 response regulator receiver modulated CheW protein
YP_001760324.1	KEGG: sse:Ssed_2677 hypothetical protein
YP_001760325.1	KEGG: sse:Ssed_2676 hypothetical protein
YP_001760326.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sse:Ssed_2675 lytic murein transglycosylase
YP_001760327.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sse:Ssed_2673 peptidylprolyl isomerase, FKBP-type
YP_001760328.1	KEGG: sse:Ssed_2672 hypothetical protein
YP_001760329.1	PFAM: phospholipase/Carboxylesterase; KEGG: sse:Ssed_2670 carboxylesterase
YP_001760330.1	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides
YP_001760331.1	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides
YP_001760332.1	PFAM: heat shock protein Hsp20; KEGG: sse:Ssed_2668 heat shock protein HSP20
YP_001760333.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_001760334.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sse:Ssed_2666 acetolactate synthase, large subunit, biosynthetic type
YP_001760335.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_2665 drug resistance transporter, Bcr/CflA subfamily
YP_001760336.1	KEGG: slo:Shew_1779 alkaline phosphatase
YP_001760337.1	KEGG: azo:azo2659 conserved hypothetical secreted protein
YP_001760338.1	PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0155 MscS mechanosensitive ion channel
YP_001760339.1	KEGG: pin:Ping_3719 sensor histidine kinase with ATPase domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001760340.1	KEGG: pin:Ping_3719 sensor histidine kinase with ATPase domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001760341.1	PFAM: MCP methyltransferase CheR-type; KEGG: pin:Ping_3720 CheR-type protein glutamate methyltransferase
YP_001760342.1	PFAM: CheB methylesterase; KEGG: pin:Ping_3721 CheB-type protein glutamate methylesterase
YP_001760343.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: amr:AM1_6357 signal transduction histidine kinase
YP_001760344.1	KEGG: lic:LIC20186 hypothetical protein
YP_001760345.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: son:SO_2282 transcriptional regulator, GntR family
YP_001760346.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spl:Spea_2526 lysine exporter protein (LysE/YggA)
YP_001760347.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: cps:CPS_3116 phenazine biosynthesis protein, PhzF family
YP_001760348.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_2664 methyltransferase type 11
YP_001760349.1	PFAM: alpha/beta hydrolase fold; KEGG: pmy:Pmen_2705 alpha/beta hydrolase fold
YP_001760350.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: shn:Shewana3_0453 peptidylprolyl isomerase, FKBP-type
YP_001760351.1	KEGG: sse:Ssed_2661 glutathione S-transferase, N-terminal domain
YP_001760352.1	PFAM: Rhodanese domain protein; KEGG: sse:Ssed_2660 rhodanese domain protein
YP_001760353.1	KEGG: sse:Ssed_2656 hypothetical protein
YP_001760354.1	PFAM: CreA family protein; KEGG: spl:Spea_2522 CreA family protein
YP_001760355.1	KEGG: vvu:VV1_2472 adenylate kinase
YP_001760356.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_001760357.1	KEGG: sse:Ssed_2652 ATP-binding protein, Mrp/Nbp35 family
YP_001760358.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
YP_001760359.1	TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; KEGG: sse:Ssed_2650 aminotransferase, class IV
YP_001760360.1	PFAM: aminodeoxychorismate lyase; KEGG: sse:Ssed_2649 aminodeoxychorismate lyase
YP_001760361.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_001760362.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: sse:Ssed_2647 DNA-directed DNA polymerase
YP_001760363.1	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_2646 type IV pilus assembly PilZ
YP_001760364.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: sse:Ssed_2645 hydrolase, TatD family
YP_001760365.1	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA
YP_001760366.1	PFAM: nucleoside recognition domain protein; KEGG: sse:Ssed_2643 nucleoside recognition domain protein
YP_001760367.1	KEGG: sse:Ssed_2641 hypothetical protein
YP_001760368.1	PFAM: diacylglycerol kinase; KEGG: sse:Ssed_2640 diacylglycerol kinase
YP_001760369.1	catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_001760370.1	PFAM: regulatory protein LuxR; KEGG: pin:Ping_2984 two component transcriptional regulator, LuxR family protein
YP_001760371.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pmc:P9515_14061 hypothetical protein
YP_001760372.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: pmc:P9515_14051 hypothetical protein
YP_001760373.1	KEGG: pmc:P9515_14041 hypothetical protein
YP_001760374.1	PFAM: glycosyl transferase family 2; KEGG: pmc:P9515_14031 hypothetical protein
YP_001760375.1	KEGG: pmc:P9515_14021 hypothetical protein
YP_001760376.1	PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO4804 conserved hypothetical protein; putative aldolase/epimerase (AraD-like)
YP_001760377.1	KEGG: rci:RCIX233 hypothetical protein
YP_001760378.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gme:Gmet_1693 radical SAM
YP_001760379.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pab:PAB1449 hydrolase related
YP_001760380.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pic:PICST_74165 predicted protein
YP_001760381.1	KEGG: spk:MGAS9429_Spy0880 oxygen-independent coproporphyrinogen-III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001760382.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdf:CD1268 ABC transporter, ATP-binding protein
YP_001760383.1	PFAM: ABC-2 type transporter; KEGG: mth:MTH1092 ABC-2 type transport system permease protein
YP_001760384.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: afu:AF0115 hypothetical protein
YP_001760386.1	PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: msi:Msm_0987 tyrosine decarboxylase, MfnA
YP_001760387.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sde:Sde_3662 guanylate kinase/L-type calcium channel region
YP_001760388.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: drm:Dred_1548 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001760389.1	KEGG: gsu:GSU1729 phenylacetate-CoA ligase
YP_001760390.1	KEGG: hau:Haur_0098 hypothetical protein
YP_001760391.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_001760392.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfu:Sfum_1003 molybdopterin oxidoreductase
YP_001760393.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mhu:Mhun_0253 transcriptional regulator, MarR family
YP_001760395.1	KEGG: mmz:MmarC7_1160 phenylacetate--CoA ligase
YP_001760396.1	KEGG: mma:MM_2984 putative ferredoxin
YP_001760398.1	PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: fra:Francci3_2770 4-hydroxyphenylacetate 3-hydroxylase
YP_001760399.1	PFAM: secretion protein HlyD family protein; KEGG: sde:Sde_1756 acriflavin resistance protein
YP_001760400.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmr:Mmar10_0819 ABC transporter related
YP_001760401.1	PFAM: protein of unknown function DUF214; KEGG: sde:Sde_1758 putative ABC transport system permease protein
YP_001760402.1	PFAM: protein of unknown function DUF214; KEGG: mmr:Mmar10_0817 protein of unknown function DUF214
YP_001760403.1	PFAM: DNA alkylation repair enzyme; KEGG: sde:Sde_3708 hypothetical protein
YP_001760404.1	KEGG: nmu:Nmul_A2516 methyltransferase
YP_001760405.1	PFAM: ABC transporter related; KEGG: dsy:DSY1177 hypothetical protein
YP_001760406.1	KEGG: mul:MUL_3536 hypothetical protein
YP_001760407.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: spl:Spea_2509 protein tyrosine phosphatase
YP_001760408.1	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)
YP_001760409.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: spc:Sputcn32_1753 2OG-Fe(II) oxygenase
YP_001760410.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sse:Ssed_2635 sulphate transporter
YP_001760411.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sse:Ssed_2634 ribonuclease, Rne/Rng family
YP_001760412.1	KEGG: sse:Ssed_2633 lysozyme; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001760413.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_2632 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001760414.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: sse:Ssed_2631 diguanylate cyclase with PAS/PAC sensor
YP_001760415.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sse:Ssed_2630 maf protein
YP_001760416.1	PFAM: protein of unknown function DUF177; KEGG: sse:Ssed_2629 protein of unknown function DUF177
YP_001760417.1	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: spl:Spea_2498 ribosomal protein L32
YP_001760418.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_001760419.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001760420.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: sse:Ssed_2625 malonyl CoA-acyl carrier protein transacylase
YP_001760421.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_2624 3-oxoacyl-(acyl-carrier-protein) reductase
YP_001760422.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001760423.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: sse:Ssed_2622 3-oxoacyl-(acyl-carrier-protein) synthase II
YP_001760424.1	KEGG: sse:Ssed_2621 hypothetical protein
YP_001760425.1	PFAM: thioesterase superfamily protein; KEGG: slo:Shew_1607 thioesterase superfamily protein
YP_001760426.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: spl:Spea_2489 6-phosphogluconate dehydrogenase NAD-binding
YP_001760427.1	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis
YP_001760428.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_001760429.1	KEGG: sse:Ssed_2616 hypothetical protein
YP_001760430.1	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth
YP_001760431.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: spl:Spea_2485 cold-shock DNA-binding domain protein
YP_001760432.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_2613 ABC transporter-related protein
YP_001760433.1	KEGG: sse:Ssed_2612 hypothetical protein
YP_001760434.1	PFAM: protein of unknown function DUF480; KEGG: sse:Ssed_2611 hypothetical protein
YP_001760435.1	KEGG: sse:Ssed_2610 hypothetical protein
YP_001760436.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_001760437.1	PFAM: S-adenosylmethionine decarboxylase; KEGG: sse:Ssed_2608 adenosylmethionine decarboxylase
YP_001760438.1	catalyzes the formation of putrescine from agmatine
YP_001760439.1	KEGG: sse:Ssed_2606 pyridoxal 5'-phosphate synthase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001760440.1	PFAM: YceI family protein; KEGG: sse:Ssed_2605 YceI family protein
YP_001760441.1	KEGG: sse:Ssed_2604 hypothetical protein
YP_001760442.1	KEGG: sse:Ssed_2602 hypothetical protein
YP_001760443.1	PFAM: protein of unknown function DUF785; KEGG: sse:Ssed_2601 protein of unknown function DUF785
YP_001760444.1	KEGG: sse:Ssed_2600 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001760445.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_001760446.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_001760447.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001760448.1	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA
YP_001760449.1	KEGG: mma:MM_3026 hypothetical protein
YP_001760451.1	KEGG: slo:Shew_0500 hypothetical protein
YP_001760452.1	TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: cps:CPS_3076 integral membrane protein, PqiA family
YP_001760453.1	PFAM: Mammalian cell entry related domain protein; KEGG: cps:CPS_3077 putative paraquat-inducible protein B
YP_001760454.1	PFAM: protein of unknown function DUF330; KEGG: cps:CPS_3078 putative lipoprotein
YP_001760455.1	PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_2468 major facilitator superfamily MFS_1
YP_001760456.1	KEGG: cps:CPS_3071 hypothetical protein
YP_001760457.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_001760458.1	KEGG: sse:Ssed_2551 extracellular solute-binding protein, family 3
YP_001760459.1	KEGG: sse:Ssed_2549 conserved hypothetical amino acid ABC transporter
YP_001760460.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_001760461.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_001760462.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pha:PSHAa1771 GalR repressor of contiguous operon, likely to bind a galactoside
YP_001760463.1	KEGG: pha:PSHAa1770 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein
YP_001760464.1	KEGG: vha:VIBHAR_03327 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_001760465.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pha:PSHAa1768 sodium/hexose cotransport protein
YP_001760466.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_001760467.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_001760468.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
YP_001760469.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_001760470.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_001760471.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_001760472.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbn:Sbal195_3318 transcriptional regulator, AraC family
YP_001760473.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_3174 protein of unknown function DUF6, transmembrane
YP_001760474.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pat:Patl_3733 cold-shock DNA-binding domain protein
YP_001760475.1	PFAM: glutathione synthase; glutathione synthase ATP-binding; KEGG: vfi:VF0976 glutathione synthetase
YP_001760476.1	SMART: helicase c2; DEAD-like helicases; KEGG: sse:Ssed_2535 helicase C2
YP_001760477.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: spl:Spea_3414 NADH dehydrogenase
YP_001760478.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: hch:HCH_06316 transcriptional regulator
YP_001760479.1	TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: hch:HCH_06322 amino acid transporters
YP_001760480.1	PFAM: glutamine synthetase catalytic region; KEGG: sse:Ssed_2532 hypothetical protein
YP_001760481.1	PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_2531 NAD-dependent aldehyde dehydrogenase
YP_001760482.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_2530 alcohol dehydrogenase
YP_001760483.1	PFAM: glutamine amidotransferase class-I; KEGG: sse:Ssed_2529 GMP synthase - glutamine amidotransferase domain
YP_001760484.1	PFAM: peptidase M22 glycoprotease; KEGG: sse:Ssed_2528 hypothetical protein
YP_001760485.1	KEGG: sse:Ssed_2527 hypothetical protein
YP_001760486.1	KEGG: sse:Ssed_2526 hypothetical protein
YP_001760487.1	KEGG: spl:Spea_2450 conserved hypothetical protein
YP_001760488.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_2524 alpha/beta hydrolase fold
YP_001760489.1	Activates fatty acids by binding to coenzyme A
YP_001760490.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: sse:Ssed_2522 ribonuclease D
YP_001760491.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_001760492.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sse:Ssed_2520 septum site-determining protein MinD
YP_001760493.1	blocks the formation of polar Z-ring septums
YP_001760494.1	PFAM: protein of unknown function DUF709; KEGG: sse:Ssed_2518 protein of unknown function DUF709
YP_001760495.1	KEGG: sse:Ssed_2517 lytic murein transglycosylase
YP_001760496.1	PFAM: protein of unknown function UPF0153; KEGG: sse:Ssed_2516 protein of unknown function UPF0153
YP_001760497.1	PFAM: beta-lactamase; KEGG: sse:Ssed_2498 beta-lactamase
YP_001760498.1	PFAM: peptidase S51 dipeptidase E; KEGG: sse:Ssed_2497 peptidase S51, dipeptidase E
YP_001760499.1	catalyzes the formation of L-homocysteine from cystathionine
YP_001760500.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_2495 integral membrane sensor signal transduction histidine kinase
YP_001760501.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_2494 two component transcriptional regulator, winged helix family
YP_001760502.1	PFAM: OmpA/MotB domain protein; KEGG: sse:Ssed_2493 OmpA/MotB domain protein
YP_001760503.1	KEGG: sse:Ssed_2492 vault protein inter-alpha-trypsin domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa
YP_001760504.1	TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sse:Ssed_2491 sortase family protein
YP_001760505.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_2490 diguanylate cyclase
YP_001760506.1	PFAM: Mammalian cell entry related domain protein; KEGG: sse:Ssed_2489 mammalian cell entry related domain protein
YP_001760507.1	PFAM: Paraquat-inducible protein A; KEGG: sse:Ssed_2488 paraquat-inducible protein A
YP_001760508.1	PFAM: Paraquat-inducible protein A; KEGG: sse:Ssed_2487 paraquat-inducible protein A
YP_001760509.1	PFAM: YebG family protein; KEGG: sse:Ssed_2486 YebG family protein
YP_001760510.1	KEGG: sfr:Sfri_2230 putative GAF sensor protein
YP_001760511.1	affects solute and DNA transport through an unknown mechanism
YP_001760512.1	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3
YP_001760513.1	TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sse:Ssed_2482 aminopeptidase N
YP_001760514.1	KEGG: sse:Ssed_2481 hypothetical protein
YP_001760515.1	PFAM: protein of unknown function DUF1302; KEGG: sse:Ssed_2480 protein of unknown function DUF1302
YP_001760516.1	PFAM: protein of unknown function DUF1329; KEGG: sse:Ssed_2479 protein of unknown function DUF1329
YP_001760517.1	KEGG: sse:Ssed_2478 BNR repeat protein
YP_001760518.1	KEGG: sse:Ssed_2477 hypothetical protein
YP_001760519.1	PFAM: NAD-glutamate dehydrogenase; KEGG: sse:Ssed_2476 NAD-glutamate dehydrogenase
YP_001760520.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_001760521.1	PFAM: protein of unknown function DUF1379; KEGG: sse:Ssed_2474 protein of unknown function DUF1379
YP_001760522.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_001760523.1	PFAM: glutaredoxin 2; KEGG: spl:Spea_1947 glutaredoxin 2
YP_001760524.1	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth
YP_001760525.1	KEGG: sse:Ssed_2470 hypothetical protein
YP_001760526.1	PFAM: ribosome modulation factor; KEGG: slo:Shew_1816 ribosome modulation factor
YP_001760527.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_001760528.1	KEGG: sse:Ssed_2467 conserved hypothetical ATP-dependent protease
YP_001760529.1	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system
YP_001760530.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_001760531.1	KEGG: sse:Ssed_2453 glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001760532.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sse:Ssed_2451 peptidoglycan-binding domain 1 protein
YP_001760533.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sse:Ssed_2450 protein of unknown function DUF882
YP_001760534.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_001760535.1	PFAM: SpoVR family protein; KEGG: sse:Ssed_2448 SpoVR family protein
YP_001760536.1	PFAM: protein of unknown function DUF444; KEGG: sse:Ssed_2447 protein of unknown function DUF444
YP_001760537.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sse:Ssed_2446 putative serine protein kinase, PrkA
YP_001760538.1	PFAM: manganese and iron superoxide dismutase; KEGG: sse:Ssed_2445 superoxide dismutase
YP_001760539.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sse:Ssed_2444 glutaredoxin-like protein
YP_001760540.1	programmed frameshift; KEGG: spl:Spea_3706 transposase
YP_001760541.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sse:Ssed_2443 uracil-xanthine permease
YP_001760542.1	KEGG: sse:Ssed_2442 hypothetical protein
YP_001760543.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_001760544.1	KEGG: sse:Ssed_2440 hypothetical protein
YP_001760545.1	KEGG: sse:Ssed_2439 hypothetical protein
YP_001760546.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sse:Ssed_2438 arsenate reductase
YP_001760547.1	PFAM: peptidase M48 Ste24p; KEGG: sse:Ssed_2437 peptidase M48, Ste24p
YP_001760548.1	PFAM: SirA family protein; KEGG: sse:Ssed_2436 SirA family protein
YP_001760549.1	PFAM: protein of unknown function UPF0118; KEGG: sse:Ssed_2435 protein of unknown function UPF0118
YP_001760550.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_001760551.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_2433 lysine exporter protein (LysE/YggA)
YP_001760552.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: spl:Spea_1978 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001760553.1	PFAM: amino acid-binding ACT domain protein; KEGG: sse:Ssed_2431 amino acid-binding ACT domain protein
YP_001760554.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_001760555.1	PFAM: NlpBDapX family lipoprotein; KEGG: sse:Ssed_2429 NlpBDapX family lipoprotein
YP_001760556.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_2428 efflux transporter, RND family, MFP subunit
YP_001760557.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_2427 acriflavin resistance protein
YP_001760558.1	KEGG: slo:Shew_1855 hypothetical protein
YP_001760559.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_001760560.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_2423 iron-containing alcohol dehydrogenase
YP_001760561.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sse:Ssed_2422 DegT/DnrJ/EryC1/StrS aminotransferase
YP_001760562.1	PFAM: carbonic anhydrase; KEGG: sse:Ssed_2421 carbonate dehydratase
YP_001760563.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_2420 alpha/beta hydrolase fold
YP_001760564.1	PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: sse:Ssed_2419 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin
YP_001760565.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_001760566.1	PFAM: arsenate reductase and related; KEGG: sse:Ssed_2417 hypothetical protein
YP_001760567.1	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose
YP_001760568.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sse:Ssed_2415 phosphoenolpyruvate-protein phosphotransferase
YP_001760569.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sse:Ssed_2414 phosphocarrier, HPr family
YP_001760570.1	KEGG: sse:Ssed_2413 hypothetical protein
YP_001760571.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sse:Ssed_2412 methyl-accepting chemotaxis sensory transducer
YP_001760572.1	KEGG: sse:Ssed_2411 hypothetical protein
YP_001760573.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: shn:Shewana3_2252 transcriptional regulator, LacI family
YP_001760574.1	KEGG: sse:Ssed_2410 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001760575.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001760576.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: sse:Ssed_2408 cupin 4 family protein
YP_001760577.1	KEGG: sse:Ssed_2403 hypothetical protein
YP_001760578.1	PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: slo:Shew_1873 glucan 1,4-alpha-glucosidase
YP_001760579.1	PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_1925 major facilitator superfamily MFS_1
YP_001760580.1	PFAM: Endoribonuclease L-PSP; KEGG: vfi:VFA0365 translation initiation inhibitor
YP_001760581.1	KEGG: shn:Shewana3_2853 hypothetical protein
YP_001760582.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_2391 DEAD/DEAH box helicase domain protein
YP_001760583.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: slo:Shew_1886 alpha amylase, catalytic region
YP_001760584.1	PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; SMART: alpha amylase catalytic sub domain; KEGG: shm:Shewmr7_2211 alpha amylase, catalytic region
YP_001760585.1	PFAM: tryptophan halogenase; KEGG: sfr:Sfri_1786 tryptophan halogenase
YP_001760586.1	TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdn:Sden_2029 TonB-dependent receptor
YP_001760587.1	PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sfr:Sfri_1788 alpha amylase, catalytic region
YP_001760588.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbn:Sbal195_2087 glucose/galactose transporter
YP_001760589.1	PFAM: Fmu (Sun) domain protein; KEGG: sse:Ssed_2390 Fmu (Sun) domain protein
YP_001760590.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sse:Ssed_2389 hypothetical protein
YP_001760591.1	PFAM: cytochrome B561; KEGG: sse:Ssed_2388 cytochrome b561
YP_001760592.1	KEGG: sse:Ssed_2387 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases
YP_001760593.1	PFAM: flagellin domain protein; KEGG: sse:Ssed_2386 flagellin-like protein
YP_001760594.1	PFAM: protein of unknown function UPF0047; KEGG: sse:Ssed_2384 protein of unknown function UPF0047
YP_001760595.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: shm:Shewmr7_2154 redoxin domain protein
YP_001760596.1	KEGG: son:SO_2101 lipoprotein, putative
YP_001760597.1	KEGG: sse:Ssed_3817 hypothetical protein
YP_001760598.1	KEGG: sse:Ssed_2376 transposase and inactivated derivative
YP_001760599.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001760600.1	KEGG: sse:Ssed_2361 hypothetical protein
YP_001760601.1	PFAM: NUDIX hydrolase; KEGG: sse:Ssed_2360 NUDIX hydrolase
YP_001760602.1	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: sse:Ssed_2359 para-aminobenzoate synthase, subunit I
YP_001760603.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: sse:Ssed_2358 hydrolyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
YP_001760604.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sse:Ssed_2357 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001760605.1	KEGG: sse:Ssed_2356 membrane protein-like protein
YP_001760606.1	KEGG: sse:Ssed_2355 hypothetical protein
YP_001760607.1	KEGG: cps:CPS_0689 hypothetical protein
YP_001760608.1	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily
YP_001760609.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sse:Ssed_3775 protein of unknown function DUF6, transmembrane
YP_001760610.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
YP_001760611.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_2352 transcriptional regulator, LysR family protein
YP_001760612.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_001760613.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001760614.1	PFAM: TM2 domain containing protein?; KEGG: tva:TVAG_495620 TM2 domain containing protein Pfam: TM2
YP_001760615.1	KEGG: mmw:Mmwyl1_3367 hypothetical protein
YP_001760616.1	KEGG: she:Shewmr4_2298 glutathione-dependent formaldehyde-activating, GFA
YP_001760617.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_2349 iron-containing alcohol dehydrogenase
YP_001760618.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: slo:Shew_1911 multiple antibiotic resistance (MarC)-related protein
YP_001760619.1	KEGG: pat:Patl_1867 hypothetical protein
YP_001760620.1	KEGG: pat:Patl_1868 hypothetical protein
YP_001760621.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: cps:CPS_1932 DNA-binding response regulator
YP_001760622.1	KEGG: cps:CPS_1882 sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001760623.1	PFAM: domain of unknown function DUF1745; KEGG: cps:CPS_1883 hypothetical protein
YP_001760624.1	PFAM: peptidase M16 domain protein; KEGG: cps:CPS_0856 putative metallopeptidase, M16 family
YP_001760625.1	KEGG: cps:CPS_0857 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001760626.1	with PqqC converts a biosynthetic intermediate to pyrroloquinoline quinone
YP_001760627.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_001760628.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_001760629.1	PFAM: FMN-binding domain protein; KEGG: cps:CPS_1884 putative regulatory protein NosR
YP_001760630.1	PFAM: Aldehyde Dehydrogenase; KEGG: pin:Ping_2539 aldehyde dehydrogenase (NAD(+))
YP_001760631.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: cps:CPS_1887 quinoprotein alcohol dehydrogenase
YP_001760632.1	KEGG: cps:CPS_1889 hypothetical protein
YP_001760633.1	KEGG: pat:Patl_1857 cytochrome c550
YP_001760634.1	KEGG: cps:CPS_1891 hypothetical protein
YP_001760635.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: cps:CPS_1892 hypothetical protein
YP_001760636.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_1893 ABC transporter, ATP-binding protein
YP_001760637.1	PFAM: ABC-2 type transporter; KEGG: cps:CPS_1894 putative daunorubicin resistance ABC transporter, permease protein
YP_001760638.1	KEGG: cps:CPS_0863 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_001760639.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_0679 conserved hypothetical TonB-dependent receptor
YP_001760640.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_001760641.1	KEGG: sse:Ssed_2345 5'-nucleotidase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001760642.1	KEGG: sse:Ssed_0260 hypothetical protein
YP_001760643.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_001760644.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_001760645.1	KEGG: sse:Ssed_2338 hypothetical protein
YP_001760646.1	TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: spl:Spea_2051 flavodoxin
YP_001760647.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: sse:Ssed_2336 CopG domain protein DNA-binding domain protein
YP_001760648.1	KEGG: spl:Spea_2053 conserved hypothetical protein
YP_001760649.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sse:Ssed_2334 alpha/beta hydrolase fold
YP_001760650.1	negative modulator of the initiation of chromosome replication
YP_001760651.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_001760652.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: sse:Ssed_2331 peptide methionine sulfoxide reductase
YP_001760653.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_001760654.1	PFAM: dehydrogenase E1 component; KEGG: sse:Ssed_2329 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
YP_001760655.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: sse:Ssed_2328 transketolase, central region
YP_001760656.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sse:Ssed_2327 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase
YP_001760657.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_001760658.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: sse:Ssed_2325 methyl-accepting chemotaxis sensory transducer
YP_001760660.1	KEGG: bga:BG0547 hypothetical protein
YP_001760661.1	KEGG: spl:Spea_2841 putative hydrolase
YP_001760662.1	KEGG: spl:Spea_2842 conserved hypothetical protein
YP_001760663.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pat:Patl_3756 transposase IS116/IS110/IS902
YP_001760664.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_001760665.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: slo:Shew_1933 endonuclease/exonuclease/phosphatase
YP_001760666.1	KEGG: sse:Ssed_2318 23S rRNA (Gm2251)-methyltransferase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001760667.1	PFAM: protein of unknown function DUF885; KEGG: sse:Ssed_2317 protein of unknown function DUF885
YP_001760668.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_2316 response regulator receiver protein
YP_001760669.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: sse:Ssed_2315 peptidase M14, carboxypeptidase A
YP_001760670.1	KEGG: sse:Ssed_2314 hypothetical protein
YP_001760671.1	PFAM: protein of unknown function DUF1315; KEGG: sse:Ssed_2313 protein of unknown function DUF1315
YP_001760672.1	converts asparagine to aspartate and ammonia
YP_001760673.1	KEGG: sse:Ssed_2311 acid phosphatase; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_001760674.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_2310 NADH:flavin oxidoreductase/NADH oxidase
YP_001760675.1	PFAM: ferredoxin; KEGG: sse:Ssed_2308 ferredoxin
YP_001760676.1	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA
YP_001760677.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_001760678.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_2305 HAD-superfamily hydrolase, subfamily IA, variant 1
YP_001760679.1	Involved in ubiquinone biosynthesis
YP_001760680.1	KEGG: sse:Ssed_2303 DNA topoisomerase (ATP-hydrolyzing); TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_001760681.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_001760682.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001760683.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_001760684.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_001760685.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_001760686.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_001760687.1	PFAM: protein of unknown function DUF1049; KEGG: sse:Ssed_2296 protein of unknown function DUF1049
YP_001760688.1	SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_2295 hypothetical protein
YP_001760689.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_001760690.1	KEGG: sse:Ssed_2293 hypothetical protein
YP_001760692.1	KEGG: amr:AM1_3564 lipoxygenase
YP_001760693.1	PFAM: protein of unknown function DUF1329; KEGG: cps:CPS_3433 hypothetical protein
YP_001760694.1	PFAM: protein of unknown function DUF1302; KEGG: cps:CPS_3432 hypothetical protein
YP_001760695.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_3431 transcriptional regulator, AraC family
YP_001760696.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sbn:Sbal195_1058 AMP-dependent synthetase and ligase
YP_001760697.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_2292 acyl-CoA dehydrogenase domain protein
YP_001760698.1	KEGG: sse:Ssed_2291 serine-type D-Ala-D-Ala carboxypeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C
YP_001760699.1	KEGG: sbl:Sbal_2079 hypothetical protein
YP_001760700.1	PFAM: Domain of unknown function DUF1904; KEGG: sse:Ssed_2289 hypothetical protein
YP_001760701.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_001760703.1	multidrug efflux protein involved in adaptation to low energy shock
YP_001760704.1	PFAM: DTW domain containing protein; KEGG: sse:Ssed_2286 DTW domain containing protein
YP_001760706.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbm:Shew185_2230 integral membrane sensor hybrid histidine kinase
YP_001760708.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sse:Ssed_2277 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
YP_001760709.1	KEGG: sse:Ssed_2276 hypothetical protein
YP_001760710.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
YP_001760711.1	PFAM: regulatory protein MarR; KEGG: pha:PSHAb0339 putative bacterial regulatory protein, MarR family
YP_001760712.1	KEGG: ppf:Pput_1637 hypothetical protein
YP_001760713.1	PFAM: GAD-like domain protein; Domain of unknown function DUF1851; KEGG: psp:PSPPH_0317 hypothetical protein
YP_001760714.1	KEGG: pvi:Cvib_0991 hypothetical protein
YP_001760715.1	KEGG: mfa:Mfla_1438 NAD-dependent epimerase/dehydratase
YP_001760716.1	KEGG: ccr:CC_2898 hypothetical protein
YP_001760717.1	PFAM: Saccharopine dehydrogenase; KEGG: rso:RSc1138 putative transmembrane protein
YP_001760718.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: spl:Spea_2204 trimethyllysine dioxygenase
YP_001760719.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: spl:Spea_2205 threonine aldolase
YP_001760720.1	PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: spl:Spea_2206 amino acid permease-associated region
YP_001760721.1	KEGG: spl:Spea_2301 conserved hypothetical protein
YP_001760722.1	KEGG: cvi:CV_2935 probable chitinase A
YP_001760723.1	PFAM: EAL domain protein; KEGG: vvy:VVA0712 hypothetical protein
YP_001760725.1	KEGG: azc:AZC_4551 hypothetical protein
YP_001760726.1	KEGG: dac:Daci_3047 hypothetical protein
YP_001760727.1	KEGG: dac:Daci_3047 hypothetical protein
YP_001760729.1	KEGG: bam:Bamb_4262 hypothetical protein
YP_001760730.1	KEGG: bam:Bamb_4263 hypothetical protein
YP_001760731.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; KEGG: gtn:GTNG_0147 RNA polymerase ECF(extracytoplasmic function)-typesigma factor (sigma-W)
YP_001760732.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: smd:Smed_5741 helix-turn-helix-domain containing protein AraC type
YP_001760733.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: sen:SACE_3710 putative alkaline serine protease
YP_001760734.1	PFAM: PepSY-associated TM helix domain protein; KEGG: sse:Ssed_2260 iron-regulated membrane protein-like protein
YP_001760735.1	KEGG: ssv:SSU98_1609 hypothetical protein
YP_001760736.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_2097 hypothetical protein
YP_001760737.1	KEGG: saz:Sama_1597 hypothetical protein
YP_001760738.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: Hpt domain protein; KEGG: sse:Ssed_2257 metal dependent phosphohydrolase
YP_001760739.1	PFAM: Choloylglycine hydrolase; KEGG: vfi:VFA0241 choloylglycine hydrolase
YP_001760740.1	PFAM: DGPFAETKE family protein; KEGG: rba:RB8484 hypothetical protein
YP_001760741.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: hch:HCH_05594 predicted RNA polymerase sigma factor containing a TPR repeat domain
YP_001760742.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sfr:Sfri_2093 amidohydrolase
YP_001760743.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: mxa:MXAN_2316 EF hand domain protein
YP_001760744.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_2115 putative Uup, ATPase components of ABC transporters with duplicated ATPase domains
YP_001760745.1	KEGG: vpa:VPA0447 hypothetical protein
YP_001760746.1	KEGG: sse:Ssed_2116 hypothetical protein
YP_001760747.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: sbl:Sbal_3200 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001760748.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sfr:Sfri_1931 GCN5-related N-acetyltransferase
YP_001760749.1	PFAM: ATP-binding region ATPase domain protein; KEGG: dvl:Dvul_2248 multi-sensor signal transduction histidine kinase
YP_001760750.1	KEGG: lic:LIC10684 putative cytochrome c
YP_001760751.1	PFAM: blue (type 1) copper domain protein; KEGG: lbj:LBJ_2376 plastocyanin related protein
YP_001760752.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: lic:LIC10682 methylamine utilization protein/cytochrome c peroxidase
YP_001760753.1	KEGG: mgm:Mmc1_0738 hypothetical protein
YP_001760754.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_2250 pseudouridine synthase
YP_001760755.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: pha:PSHAa2492 aminopeptidase
YP_001760756.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sse:Ssed_2244 phage integrase family protein
YP_001760757.1	KEGG: sse:Ssed_2243 hypothetical protein
YP_001760758.1	PFAM: protein of unknown function DUF227; SMART: CHK kinase-like; KEGG: sse:Ssed_2241 hypothetical protein
YP_001760759.1	KEGG: sse:Ssed_2240 putative orphan protein
YP_001760760.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_2239 short chain dehydrogenase
YP_001760761.1	KEGG: sse:Ssed_2238 hypothetical protein
YP_001760762.1	KEGG: sse:Ssed_2236 GCN5-related N-acetyltransferase
YP_001760763.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_2235 FAD dependent oxidoreductase
YP_001760764.1	KEGG: sse:Ssed_2234 spermidine/putrescine-binding periplasmic protein-like protein
YP_001760765.1	KEGG: sse:Ssed_2233 hypothetical protein
YP_001760766.1	KEGG: sse:Ssed_2232 hypothetical protein
YP_001760767.1	KEGG: slo:Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_001760768.1	KEGG: sse:Ssed_2227 hypothetical protein
YP_001760769.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_001760770.1	KEGG: sal:Sala_0301 putative transcriptional regulator, TetR family
YP_001760771.1	KEGG: bra:BRADO0919 hypothetical protein
YP_001760772.1	PFAM: ThiJ/PfpI domain protein; KEGG: esa:ESA_02574 hypothetical protein
YP_001760773.1	PFAM: sulfatase; KEGG: hne:HNE_1668 sulfatase family protein
YP_001760774.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: pde:Pden_0590 membrane protein involved in aromatic hydrocarbon degradation
YP_001760775.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mav:MAV_3670 short chain dehydrogenase
YP_001760776.1	KEGG: maq:Maqu_1186 hypothetical protein
YP_001760777.1	KEGG: maq:Maqu_1186 hypothetical protein
YP_001760778.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: hau:Haur_2925 molydopterin dinucleotide-binding region
YP_001760779.1	KEGG: pat:Patl_3336 glutathione S-transferase
YP_001760781.1	PFAM: sulfatase; KEGG: hne:HNE_1667 sulfatase family protein
YP_001760782.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cps:CPS_1189 long-chain-fatty-acid--CoA ligase
YP_001760784.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_001760785.1	PFAM: protein of unknown function UPF0052 and CofD; KEGG: sse:Ssed_2224 protein of unknown function UPF0052 and CofD
YP_001760786.1	KEGG: sse:Ssed_2223 Bax protein, putative
YP_001760787.1	KEGG: sse:Ssed_2222 hypothetical protein
YP_001760788.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_001760789.1	with UspC and UspD is involved in resistance to UV irradiation
YP_001760790.1	Global transcription factor that controls the expression of over 100 target genes in response to anoxia
YP_001760791.1	KEGG: sse:Ssed_2218 hypothetical protein
YP_001760792.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sse:Ssed_2217 cytochrome oxidase maturation protein, cbb3-type
YP_001760793.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sse:Ssed_2216 heavy metal translocating P-type ATPase
YP_001760794.1	KEGG: sse:Ssed_2215 hypothetical protein
YP_001760795.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sse:Ssed_2214 cytochrome c oxidase, cbb3-type, subunit III
YP_001760796.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: sse:Ssed_2213 Cbb3-type cytochrome oxidase component
YP_001760797.1	CcoO; FixO
YP_001760798.1	CcoN; FixN
YP_001760799.1	KEGG: sse:Ssed_2210 hypothetical protein
YP_001760800.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_2209 response regulator receiver modulated metal dependent phosphohydrolase
YP_001760801.1	KEGG: sse:Ssed_2208 hypothetical protein
YP_001760802.1	PFAM: integrase family protein; KEGG: sse:Ssed_2207 phage integrase family protein
YP_001760803.1	KEGG: chu:CHU_0814 hypothetical protein
YP_001760804.1	KEGG: chu:CHU_0814 hypothetical protein
YP_001760805.1	KEGG: spl:Spea_2201 conserved hypothetical protein
YP_001760806.1	PFAM: Appr-1-p processing domain protein; KEGG: spl:Spea_2200 Appr-1-p processing domain protein
YP_001760807.1	PFAM: protein of unknown function DUF1486; KEGG: sse:Ssed_1315 hypothetical protein
YP_001760808.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV_1391 probable transcriptional regulator
YP_001760809.1	PFAM: Kelch repeat-containing protein; Kelch repeat protein; KEGG: aba:Acid345_2642 Kelch repeat protein
YP_001760810.1	PFAM: LytTr DNA-binding region; KEGG: pat:Patl_2385 response regulator receiver protein
YP_001760811.1	KEGG: asa:ASA_0633 hypothetical protein
YP_001760812.1	KEGG: scl:sce9023 putative DnaK suppressor protein
YP_001760813.1	KEGG: pha:PSHAa2959 oxidoreductase
YP_001760814.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_001760815.1	PFAM: protein of unknown function DUF427; KEGG: ava:Ava_2662 protein of unknown function DUF427
YP_001760816.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sme:SMb21143 mercuric reductase
YP_001760817.1	KEGG: fjo:Fjoh_3834 hypothetical protein
YP_001760818.1	PFAM: protein of unknown function DUF323; KEGG: psa:PST_1444 hypothetical protein
YP_001760820.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: spl:Spea_0905 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001760821.1	KEGG: plu:plu2185 hypothetical protein
YP_001760822.1	PFAM: Glutathione S-transferase domain; KEGG: prw:PsycPRwf_1060 glutathione S-transferase-like protein
YP_001760823.1	KEGG: prw:PsycPRwf_1060 glutathione S-transferase-like protein
YP_001760824.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VF1066 transcriptional regulators, LysR family
YP_001760825.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sfr:Sfri_1406 antibiotic biosynthesis monooxygenase
YP_001760826.1	PFAM: nitroreductase; KEGG: spl:Spea_2510 nitroreductase
YP_001760828.1	KEGG: dps:DP0174 hypothetical protein
YP_001760829.1	PFAM: Peptidoglycan-binding domain 1 protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: ava:Ava_4421 glycoside hydrolase, family 24
YP_001760830.1	KEGG: sse:Ssed_2060 hypothetical protein
YP_001760831.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppr:PBPRA1361 hypothetical homoserine/homoserine lactone efflux protein
YP_001760832.1	KEGG: sdn:Sden_0953 hypothetical protein
YP_001760833.1	PFAM: conserved hypothetical protein; KEGG: pst:PSPTO_1038 hypothetical protein
YP_001760834.1	PFAM: RES domain protein; KEGG: pst:PSPTO_1037 hypothetical protein
YP_001760835.1	PFAM: peptidase S16 lon domain protein; KEGG: sse:Ssed_2180 putative ATP-dependent protease La-relatedprotein
YP_001760836.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_001760837.1	PFAM: peptidase S24 and S26 domain protein; KEGG: sse:Ssed_2172 SOS-response transcriptional repressor LexA -like protein
YP_001760838.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: sse:Ssed_2171 DNA-directed DNA polymerase
YP_001760839.1	KEGG: sse:Ssed_2169 hypothetical protein
YP_001760840.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sse:Ssed_2167 efflux transporter, RND family, MFP subunit
YP_001760841.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_2166 acriflavin resistance protein
YP_001760842.1	PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: ppr:PBPRA2462 hypothetical protein
YP_001760843.1	uncharacterized member of the major facilitator superfamily (MFS)
YP_001760844.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_2137 transcriptional regulator, LysR family
YP_001760845.1	PFAM: protein of unknown function UPF0005; KEGG: sse:Ssed_2136 protein of unknown function UPF0005
YP_001760846.1	TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; KEGG: sse:Ssed_2135 DsrE family protein
YP_001760847.1	TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; KEGG: sse:Ssed_2134 DsrE family protein
YP_001760848.1	TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: shm:Shewmr7_2006 DsrH family protein
YP_001760849.1	TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: sse:Ssed_2132 DsrC family protein
YP_001760850.1	KEGG: slo:Shew_2019 hypothetical protein
YP_001760851.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001760852.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_001760853.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sse:Ssed_2129 AAA ATPase, central domain protein
YP_001760854.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: sse:Ssed_2128 outer membrane lipoprotein carrier protein LolA
YP_001760855.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: sse:Ssed_2127 cell division protein FtsK/SpoIIIE
YP_001760856.1	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system
YP_001760857.1	TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: spl:Spea_2235 alanine dehydrogenase
YP_001760858.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_2124 thioredoxin reductase
YP_001760859.1	PFAM: NnrUfamily protein; KEGG: dsh:Dshi_2873 NnrUfamily protein
YP_001760860.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_001760861.1	PFAM: ribosomal protein L35; KEGG: sfr:Sfri_2026 ribosomal protein L35
YP_001760862.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_001760863.1	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001760865.1	KEGG: sse:Ssed_2119 hypothetical protein
YP_001760866.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sse:Ssed_2117 MATE efflux family protein
YP_001760867.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_001760868.1	TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: sse:Ssed_2114 putative AcnD-accessory protein PrpF
YP_001760869.1	Catalyzes the conversion of citrate to isocitrate
YP_001760870.1	KEGG: sse:Ssed_2112 2-methylcitrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase
YP_001760871.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_001760872.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sse:Ssed_2110 transcriptional regulator, GntR family
YP_001760873.1	KEGG: sfr:Sfri_2116 hypothetical protein
YP_001760875.1	KEGG: hch:HCH_06118 hypothetical protein
YP_001760876.1	PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bcl:ABC0679 hypothetical protein
YP_001760877.1	PFAM: Heat shock protein 70; KEGG: bcl:ABC0680 molecular chaperone HscC
YP_001760878.1	KEGG: son:SO_0804 hypothetical protein
YP_001760879.1	KEGG: fjo:Fjoh_0256 hypothetical protein
YP_001760880.1	TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: asa:ASA_1311 rhs family protein
YP_001760881.1	KEGG: eca:ECA3422 hypothetical protein
YP_001760882.1	KEGG: eca:ECA3423 hypothetical protein
YP_001760883.1	PFAM: Ankyrin; KEGG: eca:ECA3425 putative lipoprotein
YP_001760884.1	PFAM: PAAR repeat-containing protein; KEGG: eca:ECA3426 putative phospholipase
YP_001760885.1	TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA3427 hypothetical protein
YP_001760886.1	TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: aha:AHA_1826 hemolysin co-regulated protein
YP_001760887.1	KEGG: vco:VC0395_0015 hypothetical protein
YP_001760888.1	TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: vch:VCA0120 IcmF-related protein
YP_001760889.1	TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; KEGG: vco:VC0395_0018 hypothetical protein
YP_001760890.1	KEGG: vch:VCA0118 hypothetical protein
YP_001760891.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: vco:VC0395_0020 sigma-54 dependent transcriptional regulator
YP_001760892.1	KEGG: vco:VC0395_0021 ClpB protein; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001760893.1	KEGG: vco:VC0395_0022 hypothetical protein
YP_001760894.1	TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: vch:VCA0114 hypothetical protein
YP_001760895.1	KEGG: plu:plu0366 hypothetical protein
YP_001760896.1	TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: vch:VCA0112 hypothetical protein
YP_001760897.1	TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: vch:VCA0111 hypothetical protein
YP_001760898.1	TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: mmw:Mmwyl1_1199 protein of unknown function DUF879
YP_001760899.1	TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: vch:VCA0109 hypothetical protein
YP_001760900.1	TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: vco:VC0395_0030 hypothetical protein
YP_001760901.1	TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: vch:VCA0107 hypothetical protein
YP_001760902.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: sse:Ssed_2078 GCN5-related N-acetyltransferase
YP_001760903.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_2077 diguanylate cyclase
YP_001760904.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: slo:Shew_2041 protein of unknown function DUF1705
YP_001760905.1	PFAM: regulatory protein MarR; KEGG: sse:Ssed_2076 transcriptional regulator, MarR family
YP_001760906.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sse:Ssed_2075 cation diffusion facilitator family transporter
YP_001760907.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_001760908.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_001760909.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_001760910.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: sse:Ssed_2071 hypothetical protein
YP_001760911.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_001760912.1	Represses the expression of the zwf, eda, glp and gap
YP_001760913.1	KEGG: sse:Ssed_2068 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_001760914.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_001760915.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_2066 putative transcriptional regulator, TetR family
YP_001760916.1	PFAM: peptidase M2 peptidyl-dipeptidase A; KEGG: sse:Ssed_2057 peptidyl-dipeptidase A
YP_001760917.1	KEGG: sse:Ssed_2055 hypothetical protein
YP_001760918.1	PFAM: SEC-C motif domain protein; KEGG: sse:Ssed_2054 sec-C motif domain protein
YP_001760919.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sse:Ssed_2053 putative diguanylate phosphodiesterase
YP_001760920.1	KEGG: sse:Ssed_2052 hypothetical protein
YP_001760921.1	KEGG: sse:Ssed_2051 hypothetical protein
YP_001760922.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sse:Ssed_2050 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_001760923.1	KEGG: sse:Ssed_2049 radical activating enzyme
YP_001760924.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: sse:Ssed_2048 ExsB protein
YP_001760925.1	PFAM: Rhomboid family protein; KEGG: sse:Ssed_2047 rhomboid family protein
YP_001760926.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_001760927.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sse:Ssed_2045 diguanylate cyclase/phosphodiesterase
YP_001760928.1	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: sse:Ssed_2044 electron transport complex, RnfABCDGE type, A subunit
YP_001760929.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_001760930.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_001760931.1	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents
YP_001760932.1	part of membrane-bound complex hought to be involved in electron transport to nitrogen
YP_001760933.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
YP_001760934.1	KEGG: sse:Ssed_2038 DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_001760935.1	KEGG: sse:Ssed_2037 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_001760936.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001760937.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_2036 TonB-dependent receptor
YP_001760938.1	KEGG: sdn:Sden_2873 hypothetical protein
YP_001760939.1	KEGG: sdn:Sden_2872 hypothetical protein
YP_001760940.1	KEGG: sdn:Sden_2871 hypothetical protein
YP_001760941.1	KEGG: sdn:Sden_2870 hypothetical protein
YP_001760942.1	KEGG: sdn:Sden_2869 hypothetical protein
YP_001760943.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_001760944.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_001760945.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_001760946.1	PFAM: protein of unknown function DUF28; KEGG: sse:Ssed_2031 protein of unknown function DUF28
YP_001760947.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_001760948.1	KEGG: sse:Ssed_2029 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein family 3
YP_001760949.1	TIGRFAM: methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_2028 putative methyltransferase
YP_001760950.1	TIGRFAM: methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_2027 putative methyltransferase
YP_001760951.1	PFAM: protein of unknown function DUF785; KEGG: sse:Ssed_2026 protein of unknown function DUF785
YP_001760952.1	KEGG: sse:Ssed_2025 gonadoliberin III-related protein
YP_001760953.1	TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: sse:Ssed_2024 alpha-L-glutamate ligase-like protein
YP_001760954.1	KEGG: sse:Ssed_2023 response regulator receiver protein
YP_001760955.1	KEGG: sse:Ssed_2022 hypothetical protein
YP_001760956.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_2021 transcriptional regulator, LysR family
YP_001760957.1	KEGG: sse:Ssed_2020 SrpA-related protein
YP_001760958.1	PFAM: protein of unknown function DUF1078 domain protein; KEGG: sse:Ssed_2019 conserved hypothetical methyl-accepting chemotaxis protein
YP_001760959.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
YP_001760960.1	PFAM: thiazole biosynthesis family protein; KEGG: spl:Spea_2379 thiazole biosynthesis family protein
YP_001760961.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: sse:Ssed_2016 thiamine biosynthesis protein ThiS
YP_001760962.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: sse:Ssed_2015 UBA/ThiF-type NAD/FAD binding protein
YP_001760963.1	KEGG: sse:Ssed_2014 phosphomethylpyrimidine kinase, thiamine-phosphate diphosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1
YP_001760964.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_001760965.1	KEGG: she:Shewmr4_1880 hypothetical protein
YP_001760966.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: sse:Ssed_2012 channel protein, hemolysin III family
YP_001760967.1	KEGG: sse:Ssed_2008 DTW domain containing protein
YP_001760968.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_2007 putative two-component system sensor kinase
YP_001760969.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_001760970.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_2005 major facilitator superfamily MFS_1
YP_001760971.1	KEGG: sse:Ssed_2004 hypothetical protein
YP_001760972.1	PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sse:Ssed_2003 methylated-DNA-(protein)-cysteine S-methyltransferase
YP_001760973.1	KEGG: sse:Ssed_2002 hypothetical protein
YP_001760974.1	KEGG: sfr:Sfri_3720 hypothetical protein
YP_001760975.1	PFAM: glutamine amidotransferase class-II; KEGG: sse:Ssed_2000 glutamine amidotransferase, class-II
YP_001760976.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_001760977.1	PFAM: sodium/hydrogen exchanger; KEGG: sse:Ssed_1998 sodium/hydrogen exchanger
YP_001760978.1	KEGG: sse:Ssed_1994 hypothetical protein
YP_001760979.1	KEGG: sse:Ssed_1993 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_001760980.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_001760981.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1991 transcriptional regulator, LysR family
YP_001760982.1	KEGG: sse:Ssed_1990 hypothetical protein
YP_001760983.1	KEGG: sse:Ssed_1989 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_001760984.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: sse:Ssed_1988 lytic transglycosylase, catalytic
YP_001760985.1	KEGG: sse:Ssed_1986 intracellular proteinase inhibitor domain protein
YP_001760986.1	PFAM: AsmA family protein; KEGG: sse:Ssed_1985 AsmA family protein
YP_001760987.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_001760988.1	KEGG: sbm:Shew185_2006 hypothetical protein
YP_001760989.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sse:Ssed_1983 methyl-accepting chemotaxis sensory transducer
YP_001760990.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_001760991.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_001760992.1	PFAM: protein of unknown function DUF195; KEGG: sse:Ssed_1980 protein of unknown function DUF195
YP_001760993.1	PFAM: Lytic transglycosylase catalytic; KEGG: sse:Ssed_1979 lytic transglycosylase, catalytic
YP_001760994.1	PFAM: EAL domain protein; KEGG: sse:Ssed_1968 diguanylate phosphodiesterase
YP_001760995.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sse:Ssed_1967 ATPase associated with various cellular activities, AAA_3
YP_001760996.1	PFAM: protein of unknown function DUF58; KEGG: sse:Ssed_1966 protein of unknown function DUF58
YP_001760997.1	PFAM: transglutaminase domain protein; KEGG: sse:Ssed_1965 transglutaminase domain protein
YP_001760998.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1964 nitrate/nitrite transporter
YP_001760999.1	PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: sse:Ssed_1963 serine/threonine protein kinase
YP_001761000.1	KEGG: sse:Ssed_1962 hypothetical protein
YP_001761001.1	PFAM: HPP family protein?; KEGG: sse:Ssed_1960 CBS-domain-containing membrane protein-like protein
YP_001761002.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sse:Ssed_1958 putative peptidyl-prolyl cis-trans isomerase, PpiC-type
YP_001761003.1	KEGG: sse:Ssed_1957 nitrate reductase; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit
YP_001761004.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: sse:Ssed_1956 nitrate reductase molybdenum cofactor assembly chaperone
YP_001761005.1	TIGRFAM: nitrate reductase, beta subunit; KEGG: sse:Ssed_1955 respiratory nitrate reductase beta subuni
YP_001761006.1	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_1954 respiratory nitrate reductase alpha chain
YP_001761007.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1953 nitrate/nitrite transporter
YP_001761008.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sse:Ssed_1952 two-component sensor NarX
YP_001761009.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sse:Ssed_1951 putative nitrate/nitrite response regulator; NarL
YP_001761010.1	KEGG: sbn:Sbal195_2734 CBS domain protein
YP_001761011.1	KEGG: sdn:Sden_0777 hypothetical protein
YP_001761012.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_1938 nitrate/nitrite transporter
YP_001761013.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: sse:Ssed_1937 exodeoxyribonuclease V, gamma subunit
YP_001761014.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: sse:Ssed_1936 exodeoxyribonuclease V, beta subunit
YP_001761015.1	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: sse:Ssed_1935 exodeoxyribonuclease V
YP_001761016.1	KEGG: pha:PSHAb0519 hypothetical protein
YP_001761017.1	TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: sdn:Sden_1131 integron integrase
YP_001761018.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: she:Shewmr4_1444 transposase, IS204/IS1001/IS1096/IS1165 family protein
YP_001761019.1	KEGG: sse:Ssed_2558 hypothetical protein
YP_001761022.1	PFAM: Ion transport 2 domain protein; KEGG: prw:PsycPRwf_2088 ion transport 2 domain protein
YP_001761023.1	KEGG: vfi:VFA1145 hypothetical protein
YP_001761024.1	PFAM: protein of unknown function DUF1568; KEGG: sse:Ssed_1948 protein of unknown function DUF1568
YP_001761027.1	KEGG: she:Shewmr4_1803 acyltransferase domain protein
YP_001761028.1	PFAM: major facilitator superfamily MFS_1; KEGG: bba:Bd1577 multidrug resistance protein
YP_001761029.1	PFAM: IucA/IucC family protein; KEGG: spe:Spro_0920 IucA/IucC family protein
YP_001761031.1	KEGG: spl:Spea_3159 hydrolase (secreted protein)
YP_001761032.1	PFAM: transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: sfr:Sfri_0530 hypothetical protein
YP_001761033.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_1862 TonB-dependent receptor
YP_001761035.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: PAS domain containing protein; Tetratricopeptide domain protein; KEGG: sfr:Sfri_0071 TPR repeat-containing protein
YP_001761037.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: stp:Strop_0039 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001761038.1	KEGG: rle:RL2856 putative transmembrane lysine/arginine export protein
YP_001761039.1	KEGG: prw:PsycPRwf_1960 lysine exporter protein (LysE/YggA)
YP_001761040.1	KEGG: sse:Ssed_1929 hypothetical protein
YP_001761041.1	KEGG: sse:Ssed_1928 hypothetical protein
YP_001761042.1	KEGG: sse:Ssed_1927 hypothetical protein
YP_001761043.1	KEGG: sbn:Sbal195_3631 hypothetical protein
YP_001761044.1	PFAM: Rieske [2Fe-2S] domain protein; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: amr:AM1_3309 thiamine pyrophosphate enzyme
YP_001761045.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_001761046.1	PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: sbn:Sbal195_0998 Na+ dependent nucleoside transporter domain protein
YP_001761047.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbn:Sbal195_0999 transcriptional regulator, LysR family
YP_001761048.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1917 transcriptional regulator, LysR family
YP_001761049.1	TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: spl:Spea_2425 periplasmic nitrate (or nitrite) reductase C-type cytochrome, NapC/NirT family
YP_001761050.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: spl:Spea_2426 nitrate reductase cytochrome c-type subunit (NapB)
YP_001761051.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_001761052.1	PFAM: NapD family protein; KEGG: spl:Spea_2428 NapD family protein
YP_001761053.1	PFAM: periplasmic nitrate reductase NapE; KEGG: slo:Shew_1768 periplasmic nitrate reductase NapE
YP_001761054.1	KEGG: sse:Ssed_1911 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases
YP_001761055.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: saz:Sama_0619 response regulator receiver protein
YP_001761056.1	PFAM: CBS domain containing protein; KEGG: sse:Ssed_1909 putative signal transduction protein with CBS domains
YP_001761057.1	PFAM: peptidase T2 asparaginase 2; KEGG: sse:Ssed_2508 peptidase T2, asparaginase 2
YP_001761058.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: spl:Spea_2436 surface antigen (D15)
YP_001761059.1	PFAM: protein of unknown function DUF490; KEGG: sse:Ssed_2511 protein of unknown function DUF490
YP_001761060.1	Multifunctional regulator of fatty acid metabolism
YP_001761061.1	involved in regulation of intracellular pH under alkaline conditions
YP_001761062.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_001761063.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001761064.1	PFAM: protein of unknown function DUF34; KEGG: sse:Ssed_1892 hypothetical protein
YP_001761065.1	KEGG: sse:Ssed_1891 hypothetical protein
YP_001761066.1	PFAM: 17 kDa surface antigen; KEGG: sse:Ssed_1890 17 kDa surface antigen
YP_001761067.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_001761068.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_001761069.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_001761070.1	KEGG: sse:Ssed_1886 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001761071.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_001761072.1	KEGG: sse:Ssed_1884 cold-shock DNA-binding domain protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_001761073.1	KEGG: sse:Ssed_1883 isocitrate dehydrogenase (NADP(+)); TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type
YP_001761074.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_1882 pseudouridine synthase, Rsu
YP_001761075.1	PFAM: NUDIX hydrolase; KEGG: shw:Sputw3181_1777 NUDIX hydrolase
YP_001761076.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_001761077.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_001761078.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_001761079.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: slo:Shew_1557 cupin 4 family protein
YP_001761080.1	KEGG: sse:Ssed_1878 hypothetical protein
YP_001761081.1	PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sse:Ssed_1877 Glu/Leu/Phe/Val dehydrogenase, dimerisation region
YP_001761082.1	KEGG: sse:Ssed_1876 hypothetical protein
YP_001761083.1	PFAM: regulatory protein MarR; KEGG: sse:Ssed_1874 transcriptional regulator, MarR family
YP_001761084.1	KEGG: sse:Ssed_1873 protein of unknown function DUF1285
YP_001761085.1	PFAM: FAD linked oxidase domain protein; KEGG: sse:Ssed_1872 D-lactate dehydrogenase (cytochrome)
YP_001761086.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_001761087.1	PFAM: protein of unknown function DUF299; KEGG: sse:Ssed_1870 protein of unknown function DUF299
YP_001761088.1	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
YP_001761089.1	PFAM: Carbohydrate-binding family V/XII; chitin-binding domain 3 protein; KEGG: vvu:VV2_1258 hypothetical protein
YP_001761090.1	PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; chitinase domain protein; SMART: chitinase II; KEGG: sbl:Sbal_2491 chitinase
YP_001761091.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_1868 thioesterase superfamily protein
YP_001761092.1	PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1545 two component transcriptional regulator, LuxR family
YP_001761093.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_1866 FAD dependent oxidoreductase
YP_001761094.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sse:Ssed_1865 fumarylacetoacetate (FAA) hydrolase
YP_001761095.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_1864 integral membrane sensor hybrid histidine kinase
YP_001761096.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_001761097.1	PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_1862 type III restriction enzyme, res subunit
YP_001761098.1	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase
YP_001761099.1	PFAM: porin; KEGG: sse:Ssed_1860 porin
YP_001761100.1	TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sse:Ssed_1859 tetratricopeptide TPR_2 repeat protein
YP_001761101.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: sse:Ssed_1858 OmpA domain protein
YP_001761102.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_001761103.1	TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: spl:Spea_2565 Tol-Pal system TolA
YP_001761104.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sse:Ssed_1855 biopolymer transport protein ExbD/TolR
YP_001761105.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: sse:Ssed_1854 MotA/TolQ/ExbB proton channel
YP_001761106.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_1853 4-hydroxybenzoyl-CoA thioesterase
YP_001761107.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sse:Ssed_1852 prolyl oligopeptidase
YP_001761108.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001761109.1	PFAM: OmpA/MotB domain protein; KEGG: sse:Ssed_1851 OmpA/MotB domain protein
YP_001761110.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_001761111.1	KEGG: slo:Shew_1519 hypothetical protein
YP_001761112.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_1848 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001761113.1	PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: spl:Spea_2575 Na+/H+ antiporter NhaC
YP_001761114.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_001761115.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_001761116.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_001761117.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_1840 HAD-superfamily hydrolase, subfamily IIA
YP_001761118.1	PFAM: peptidase M28; KEGG: sse:Ssed_1839 peptidase M28
YP_001761119.1	KEGG: spl:Spea_2580 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein
YP_001761120.1	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP
YP_001761121.1	KEGG: tte:TTE1081 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001761122.1	PFAM: Heme NO binding domain protein; KEGG: hch:HCH_03700 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
YP_001761123.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001761124.1	KEGG: sse:Ssed_1835 hypothetical protein
YP_001761125.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1834 GCN5-related N-acetyltransferase
YP_001761126.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_1833 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001761127.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sse:Ssed_1832 oxidoreductase FAD-binding domain protein
YP_001761128.1	PFAM: protein of unknown function DUF748; KEGG: sse:Ssed_1831 protein of unknown function DUF748
YP_001761129.1	PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: sse:Ssed_1830 glutaredoxin
YP_001761130.1	PFAM: CBS domain containing protein; KEGG: sse:Ssed_1829 putative signal transduction protein with CBS domains
YP_001761131.1	KEGG: sse:Ssed_1828 putative nitrogen regulatory protein P-II
YP_001761132.1	PFAM: protein of unknown function DUF1538; KEGG: sse:Ssed_1827 protein of unknown function DUF1538
YP_001761133.1	PFAM: protein of unknown function DUF1538; KEGG: sse:Ssed_1826 protein of unknown function DUF1538
YP_001761134.1	KEGG: sse:Ssed_1825 lipoprotein, putative
YP_001761135.1	KEGG: sse:Ssed_1823 hypothetical protein
YP_001761136.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: sse:Ssed_1822 MATE efflux family protein
YP_001761137.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sse:Ssed_1821 ion transport protein
YP_001761138.1	KEGG: slo:Shew_1490 ErfK/YbiS/YcfS/YnhG family protein
YP_001761139.1	PFAM: protein of unknown function DUF991; KEGG: sse:Ssed_1819 protein of unknown function DUF991
YP_001761140.1	KEGG: slo:Shew_1487 hypothetical protein
YP_001761141.1	KEGG: slo:Shew_1486 hypothetical protein
YP_001761142.1	KEGG: slo:Shew_1485 hypothetical protein
YP_001761143.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: slo:Shew_1484 cyclopropane-fatty-acyl-phospholipid synthase
YP_001761144.1	PFAM: protein of unknown function DUF1365; KEGG: slo:Shew_1483 protein of unknown function DUF1365
YP_001761145.1	KEGG: slo:Shew_1482 amine oxidase
YP_001761146.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: slo:Shew_1481 short-chain dehydrogenase/reductase SDR
YP_001761147.1	KEGG: slo:Shew_1480 protein of unknown function DUF1486
YP_001761148.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: slo:Shew_1479 deoxyribodipyrimidine photo-lyase
YP_001761149.1	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: slo:Shew_1478 protein of unknown function DUF1722
YP_001761150.1	TIGRFAM: anti-sigma factor, , ChrR family; KEGG: slo:Shew_1477 anti-ECFsigma factor, ChrR
YP_001761151.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001761152.1	KEGG: slo:Shew_1475 hypothetical protein
YP_001761154.1	PFAM: peptidase M23B; KEGG: sse:Ssed_1812 peptidase M23B
YP_001761155.1	KEGG: sse:Ssed_1811 hypothetical protein
YP_001761156.1	PFAM: 37kDa nucleoid-associated protein; KEGG: sse:Ssed_1810 37 kDa nucleoid-associated protein
YP_001761157.1	PFAM: protein of unknown function DUF1414; KEGG: sse:Ssed_1809 protein of unknown function DUF1414
YP_001761158.1	PFAM: sulfatase; KEGG: sse:Ssed_1808 sulfatase
YP_001761159.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1805 diguanylate cyclase
YP_001761160.1	KEGG: sse:Ssed_1804 hypothetical protein
YP_001761161.1	KEGG: sse:Ssed_1803 hypothetical protein
YP_001761162.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_001761163.1	PFAM: porin Gram-negative type; KEGG: hha:Hhal_2050 porin, gram-negative type
YP_001761164.1	PFAM: chemotaxis sensory transducer; CHASE3 domain protein; KEGG: dps:DP0292 chemotaxis transducer
YP_001761165.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sse:Ssed_1801 transcriptional regulator, AraC family
YP_001761166.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_1800 threonine efflux protein, putative
YP_001761167.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sse:Ssed_1798 two component, sigma54 specific, transcriptional regulator, fis family
YP_001761168.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_1797 integral membrane sensor signal transduction histidine kinase
YP_001761169.1	KEGG: sse:Ssed_1796 hypothetical protein
YP_001761170.1	KEGG: sse:Ssed_1795 hypothetical protein
YP_001761171.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1794 binding-protein-dependent transport systems inner membrane component
YP_001761172.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_1793 putative phosphonate ABC transporter, ATP-binding protein
YP_001761173.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: sse:Ssed_1792 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_001761174.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: spl:Spea_1746 two component transcriptional regulator, winged helix family
YP_001761175.1	PFAM: ATP-binding region ATPase domain protein; KEGG: sse:Ssed_1790 integral membrane sensor signal transduction histidine kinase
YP_001761176.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: saz:Sama_1540 hypothetical protein
YP_001761177.1	KEGG: sse:Ssed_1788 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_001761178.1	KEGG: sse:Ssed_1787 hypothetical protein
YP_001761179.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: sse:Ssed_1786 magnesium and cobalt transport protein CorA
YP_001761180.1	KEGG: sse:Ssed_1785 hypothetical protein
YP_001761181.1	KEGG: sse:Ssed_1784 hypothetical protein
YP_001761182.1	PFAM: Patatin; KEGG: slo:Shew_2356 patatin
YP_001761183.1	KEGG: sse:Ssed_0144 hypothetical protein
YP_001761184.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: hch:HCH_02587 methyl-accepting chemotaxis protein
YP_001761185.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_001761186.1	PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: sse:Ssed_1782 peptidase M24
YP_001761187.1	KEGG: rso:RS03686 hypothetical protein
YP_001761188.1	KEGG: sdn:Sden_0643 hypothetical protein
YP_001761189.1	PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01316 hypothetical protein
YP_001761190.1	PFAM: FAD dependent oxidoreductase; KEGG: spl:Spea_1706 FAD dependent oxidoreductase
YP_001761191.1	PFAM: proline racemase; KEGG: sse:Ssed_1763 proline racemase
YP_001761192.1	PFAM: dihydrodipicolinate synthetase; KEGG: sse:Ssed_1762 dihydrodipicolinate synthase
YP_001761193.1	PFAM: proline racemase; KEGG: sse:Ssed_1761 proline racemase
YP_001761194.1	PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1760 aldehyde dehydrogenase
YP_001761195.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sse:Ssed_1759 transcriptional regulator, GntR family
YP_001761196.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis
YP_001761197.1	KEGG: noc:Noc_2940 hypothetical protein
YP_001761198.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cbf:CLI_1295 putative sensory box-containing diguanylate cyclase
YP_001761200.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: sse:Ssed_1757 NAD(P)(+) transhydrogenase (AB-specific)
YP_001761201.1	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm
YP_001761202.1	KEGG: sse:Ssed_1755 hypothetical protein
YP_001761203.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_1753 sensor protein LuxQ
YP_001761204.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: slo:Shew_2368 exonuclease, RNase T and DNA polymerase III
YP_001761205.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: sse:Ssed_1751 cyclic nucleotide-binding protein
YP_001761206.1	PFAM: Amidohydrolase 3; KEGG: cps:CPS_2078 hypothetical protein
YP_001761207.1	KEGG: spl:Spea_1641 hypothetical protein
YP_001761208.1	PFAM: Na+/solute symporter; KEGG: sse:Ssed_1746 Na+/solute symporter
YP_001761209.1	KEGG: sse:Ssed_1745 hypothetical protein
YP_001761211.1	KEGG: mdo:100021983 hypothetical protein LOC100021983
YP_001761212.1	PFAM: DSBA oxidoreductase; KEGG: sse:Ssed_1742 DsbA oxidoreductase
YP_001761213.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: sse:Ssed_1741 NAD-dependent epimerase/dehydratase
YP_001761214.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: sse:Ssed_1740 metal dependent phosphohydrolase
YP_001761215.1	KEGG: sse:Ssed_1739 hypothetical protein
YP_001761216.1	PFAM: Domain of unknown function DUF1842; KEGG: asa:ASA_3356 hypothetical protein
YP_001761217.1	KEGG: sse:Ssed_1738 DNA ligase (NAD(+)); TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase
YP_001761218.1	TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region; KEGG: sse:Ssed_1737 cell division protein ZipA
YP_001761219.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: slo:Shew_2379 chromosome segregation protein SMC
YP_001761220.1	putative role in sulfur assimilation
YP_001761221.1	KEGG: cdf:CD2993 hypothetical protein
YP_001761222.1	KEGG: sil:SPO0750 hypothetical protein
YP_001761223.1	PFAM: beta-lactamase domain protein; KEGG: cps:CPS_1904 metallo-beta-lactamase family protein
YP_001761224.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_4566 tetratricopeptide TPR_2 repeat protein
YP_001761225.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: sse:Ssed_1723 diguanylate cyclase
YP_001761226.1	PFAM: RDD domain containing protein; KEGG: sse:Ssed_1722 RDD domain containing protein
YP_001761227.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sse:Ssed_1721 cysteine synthase A
YP_001761228.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_1720 putative transcriptional regulator, TetR family
YP_001761229.1	PFAM: CBS domain containing protein; KEGG: sse:Ssed_1719 CBS domain containing membrane protein
YP_001761230.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: bas:BUsg147 NADH dehydrogenase I chain A
YP_001761231.1	KEGG: noc:Noc_1126 NADH dehydrogenase (ubiquinone), 20 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_001761232.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms
YP_001761233.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: noc:Noc_1124 NADH dehydrogenase (ubiquinone), 24 kDa subunit
YP_001761234.1	KEGG: noc:Noc_1123 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
YP_001761235.1	TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase Fe4S4 region; KEGG: noc:Noc_1122 NADH-quinone oxidoreductase, chain G
YP_001761236.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: noc:Noc_1121 respiratory-chain NADH dehydrogenase, subunit 1
YP_001761237.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mca:MCA1352 NADH dehydrogenase subunit I
YP_001761238.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: noc:Noc_1119 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_001761239.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: kpn:KPN_02669 NADH dehydrogenase kappa subunit
YP_001761240.1	KEGG: mca:MCA1349 NADH dehydrogenase I, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_001761241.1	KEGG: mca:MCA1348 NADH dehydrogenase I, M subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001761242.1	KEGG: acr:Acry_1108 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_001761243.1	PFAM: O-methyltransferase family 2; KEGG: sse:Ssed_1718 O-methyltransferase, putative
YP_001761244.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: sse:Ssed_1717 C4-dicarboxylate transporter/malic acid transport protein
YP_001761245.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_1716 TonB-dependent receptor, plug
YP_001761246.1	PFAM: C4-dicarboxylate anaerobic carrier; KEGG: sse:Ssed_1715 C4-dicarboxylate anaerobic carrier
YP_001761247.1	mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase
YP_001761248.1	KEGG: sse:Ssed_1713 hypothetical protein
YP_001761249.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_1675 transcriptional regulator, LysR family
YP_001761250.1	PFAM: formate/nitrite transporter; CBS domain containing protein; KEGG: spl:Spea_1674 formate/nitrite transporter
YP_001761252.1	KEGG: sse:Ssed_1709 hypothetical protein
YP_001761253.1	KEGG: sse:Ssed_1708 formate C-acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL
YP_001761254.1	activates pyruvate formate-lyase 1 under anaerobic conditions
YP_001761255.1	PFAM: protein of unknown function DUF412; KEGG: sse:Ssed_1706 protein of unknown function DUF412
YP_001761256.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_001761257.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_001761258.1	KEGG: sse:Ssed_1703 hypothetical protein
YP_001761259.1	KEGG: sse:Ssed_1702 hypothetical protein
YP_001761260.1	KEGG: sse:Ssed_1701 hypothetical protein
YP_001761261.1	PFAM: protein of unknown function UPF0118; KEGG: sse:Ssed_1700 protein of unknown function UPF0118
YP_001761262.1	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate
YP_001761263.1	PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: sse:Ssed_1699 hypothetical protein
YP_001761264.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_1698 protein of unknown function DUF214
YP_001761265.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_1697 ABC transporter related
YP_001761266.1	PFAM: lipolytic protein G-D-S-L family; KEGG: sse:Ssed_1696 arylesterase
YP_001761267.1	KEGG: sse:Ssed_1695 hypothetical protein
YP_001761268.1	KEGG: slo:Shew_2404 hypothetical protein
YP_001761269.1	KEGG: spl:Spea_1657 conserved hypothetical protein
YP_001761270.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_1656 transcriptional regulator, AraC family
YP_001761271.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_001761272.1	KEGG: sse:Ssed_1693 hypothetical protein
YP_001761273.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_1692 short-chain dehydrogenase/reductase SDR
YP_001761274.1	KEGG: sbl:Sbal_2695 hypothetical protein
YP_001761275.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sse:Ssed_1691 pseudouridine synthase
YP_001761276.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: sse:Ssed_1690 putative transcriptional regulator
YP_001761277.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: sse:Ssed_1689 chromosome segregation and condensation protein ScpA
YP_001761278.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: sse:Ssed_1688 SUA5/YciO/YrdC/YwlC family protein
YP_001761279.1	PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sse:Ssed_1687 PHP C-terminal domain protein
YP_001761280.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_001761281.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_001761282.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001761283.1	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate
YP_001761284.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_001761285.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_001761286.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_1680 metal dependent phosphohydrolase
YP_001761287.1	PFAM: Lipoxygenase; KEGG: amr:AM1_3903 lipoxygenase
YP_001761288.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor transmembrane region; KEGG: pin:Ping_0260 diguanylate cyclase
YP_001761289.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_1021 TonB-dependent receptor
YP_001761290.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain protein repeat-containing protein
YP_001761291.1	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: aba:Acid345_4155 transcriptional regulatory protein-like
YP_001761292.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sde:Sde_3035 TonB-dependent receptor
YP_001761293.1	Involved in cell division; probably involved in intracellular septation
YP_001761294.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_001761295.1	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction
YP_001761296.1	KEGG: sbm:Shew185_3462 hypothetical protein
YP_001761297.1	KEGG: cps:CPS_3054 tat (twin-arginine translocation) pathway signal sequence domain protein
YP_001761298.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: cps:CPS_3053 putative oxidoreductase
YP_001761299.1	PFAM: dehydrogenase E1 component; KEGG: cps:CPS_3052 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit
YP_001761300.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: cps:CPS_3051 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit
YP_001761301.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: swi:Swit_0666 biotin/lipoyl attachment domain-containing protein
YP_001761302.1	PFAM: catalytic domain of components of various dehydrogenase complexes; KEGG: smu:SMU.1421 branched-chain alpha-keto acid dehydrogenase subunit E2
YP_001761303.1	KEGG: cps:CPS_3049 hypothetical protein
YP_001761304.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; Resolvase helix-turn-helix domain protein; SMART: AAA ATPase; KEGG: cps:CPS_3048 acetoin catabolism regulatory protein
YP_001761305.1	KEGG: cps:CPS_3046 hypothetical protein
YP_001761306.1	KEGG: cps:CPS_3056 hypothetical protein
YP_001761307.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cps:CPS_3057 glyoxalase family protein
YP_001761308.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sse:Ssed_1672 hypothetical protein
YP_001761309.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_1667 long-chain-fatty-acid--CoA ligase
YP_001761310.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_1666 helix-turn-helix-domain containing protein, AraC type
YP_001761311.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_1665 NADH:flavin oxidoreductase/NADH oxidase
YP_001761312.1	KEGG: sfr:Sfri_1419 hypothetical protein
YP_001761313.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sfr:Sfri_1418 diguanylate cyclase/phosphodiesterase
YP_001761314.1	KEGG: sfr:Sfri_1417 hypothetical protein
YP_001761315.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_1664 methyl-accepting chemotaxis sensory transducer
YP_001761316.1	PFAM: protein of unknown function DUF1097; KEGG: sse:Ssed_1663 hypothetical protein
YP_001761317.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: slo:Shew_2265 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_001761318.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sfr:Sfri_1414 (2Fe-2S)-binding domain protein
YP_001761319.1	KEGG: pin:Ping_1833 isoquinoline 1-oxidoreductase maturation factor
YP_001761320.1	PFAM: protein of unknown function DUF182; KEGG: slo:Shew_2268 protein of unknown function DUF182
YP_001761321.1	PFAM: PKD domain containing protein; peptidase M14 carboxypeptidase A; KEGG: hch:HCH_04864 predicted carboxypeptidase
YP_001761322.1	PFAM: beta-lactamase domain protein; KEGG: spl:Spea_1635 beta-lactamase domain protein
YP_001761323.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_1661 alpha/beta hydrolase fold
YP_001761325.1	KEGG: shm:Shewmr7_3142 hypothetical protein
YP_001761326.1	PFAM: protein of unknown function DUF1568; KEGG: spl:Spea_2922 protein of unknown function DUF1568
YP_001761327.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: spc:Sputcn32_3376 helicase domain protein
YP_001761328.1	KEGG: pha:PSHAa2104 hypothetical protein
YP_001761329.1	PFAM: protein of unknown function DUF1643; KEGG: ecs:ECs5248 hypothetical protein
YP_001761330.1	KEGG: mes:Meso_4612 hypothetical protein
YP_001761332.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_4011 transcriptional regulator, LysR family
YP_001761333.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bat:BAS3184 alcohol dehydrogenase, zinc-containing
YP_001761334.1	Hsp31 stabilizes early unfolding protein intermediates under severe heat stress
YP_001761336.1	PFAM: regulatory protein RecX; KEGG: sse:Ssed_3210 regulatory protein RecX
YP_001761337.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: cps:CPS_1617 transcriptional regulator, AraC family
YP_001761338.1	KEGG: sen:SACE_4075 hypothetical protein
YP_001761339.1	KEGG: spl:Spea_2293 hypothetical protein
YP_001761340.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: saz:Sama_0275 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001761341.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0677 transcriptional regulator, LysR family
YP_001761342.1	decatenates replicating daughter chromosomes
YP_001761343.1	KEGG: spl:Spea_1624 hypothetical protein
YP_001761344.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_2864 two-component response regulator
YP_001761345.1	KEGG: vch:VC1349 sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_001761346.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_001761347.1	PFAM: Colicin V production protein; KEGG: sse:Ssed_1655 colicin V production protein
YP_001761348.1	PFAM: Sporulation domain protein; KEGG: sse:Ssed_1654 sporulation domain protein
YP_001761349.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sse:Ssed_1653 dihydrofolate synthase
YP_001761350.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_001761351.1	KEGG: sbm:Shew185_2760 hypothetical protein
YP_001761352.1	KEGG: sse:Ssed_1650 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region
YP_001761353.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sse:Ssed_1649 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region
YP_001761354.1	KEGG: sse:Ssed_3520 hypothetical protein
YP_001761355.1	KEGG: sse:Ssed_3522 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein
YP_001761356.1	SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_3523 extracellular solute-binding protein, family 3
YP_001761357.1	TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: sse:Ssed_3526 putative iron-sulfur cluster binding protein
YP_001761358.1	PFAM: protein of unknown function DUF1458; KEGG: sse:Ssed_3527 protein of unknown function DUF1458
YP_001761359.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_0485 TonB-dependent receptor
YP_001761360.1	KEGG: cps:CPS_0486 BNR repeat protein
YP_001761361.1	KEGG: cps:CPS_0487 hypothetical protein
YP_001761362.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: spl:Spea_0388 leucyl aminopeptidase
YP_001761363.1	PFAM: regulatory protein LuxR; KEGG: bja:blr1880 transcriptional regulatory protein
YP_001761364.1	KEGG: gur:Gura_3111 N-acyl-L-homoserine lactone synthetase-like protein
YP_001761365.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: sse:Ssed_3542 glucose-methanol-choline oxidoreductase
YP_001761366.1	KEGG: sse:Ssed_3543 hypothetical protein
YP_001761367.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_3544 hypothetical protein
YP_001761368.1	KEGG: sse:Ssed_3546 hypothetical protein
YP_001761369.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sse:Ssed_3548 redoxin domain protein
YP_001761370.1	PFAM: DSBA oxidoreductase; KEGG: shw:Sputw3181_3957 DsbA oxidoreductase
YP_001761371.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sse:Ssed_3550 putative suppressor for copper-sensitivity B precursor
YP_001761372.1	KEGG: spc:Sputcn32_0113 hypothetical protein
YP_001761373.1	PFAM: ferredoxin-dependent glutamate synthase; SMART: zinc finger CDGSH-type domain protein; KEGG: sse:Ssed_3552 ferredoxin-dependent glutamate synthase
YP_001761374.1	PFAM: Beta-ketoacyl synthase; KEGG: sse:Ssed_1644 beta-ketoacyl synthase
YP_001761375.1	TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_1643 FAD dependent oxidoreductase
YP_001761376.1	PFAM: histidine kinase A domain protein; KEGG: vfi:VFA0265 sensory transduction protein kinase
YP_001761377.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vpa:VPA1076 putative two-component response regulator
YP_001761378.1	KEGG: ppr:PBPRA2454 hypothetical lipoprotein
YP_001761379.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: spl:Spea_2584 tRNA/rRNA methyltransferase (SpoU)
YP_001761380.1	PFAM: YfcL protein; KEGG: spl:Spea_2585 YfcL protein
YP_001761381.1	PFAM: ATP-NAD/AcoX kinase; KEGG: sse:Ssed_1640 hypothetical protein
YP_001761382.1	PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: sse:Ssed_1639 major facilitator superfamily MFS_1
YP_001761383.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_001761384.1	involved in methylation of ribosomal protein L3
YP_001761385.1	PFAM: Smr protein/MutS2; KEGG: sse:Ssed_1636 Smr protein/MutS2
YP_001761386.1	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: sse:Ssed_1635 phosphohistidine phosphatase, SixA
YP_001761387.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_1634 peptidase M16 domain protein
YP_001761388.1	KEGG: sse:Ssed_1633 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001761389.1	KEGG: slo:Shew_2422 hypothetical protein
YP_001761390.1	KEGG: sse:Ssed_1631 hypothetical protein
YP_001761391.1	KEGG: sse:Ssed_1630 hypothetical protein
YP_001761392.1	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate
YP_001761393.1	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth
YP_001761394.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sse:Ssed_1627 ATPase associated with various cellular activities, AAA_3
YP_001761395.1	PFAM: protein of unknown function DUF58; KEGG: sse:Ssed_1626 protein of unknown function DUF58
YP_001761396.1	KEGG: sse:Ssed_1625 hypothetical protein
YP_001761397.1	PFAM: von Willebrand factor type A; KEGG: sse:Ssed_1624 von Willebrand factor, type A
YP_001761398.1	PFAM: TPR repeat-containing protein; von Willebrand factor type A; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_1623 tetratricopeptide TPR_2 repeat protein
YP_001761399.1	KEGG: sse:Ssed_1622 hypothetical protein
YP_001761400.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_001761401.1	KEGG: sse:Ssed_1620 hypothetical protein
YP_001761402.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: sse:Ssed_1619 sodium/proline symporter
YP_001761403.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sse:Ssed_1618 membrane protein involved in aromatic hydrocarbon degradation
YP_001761404.1	KEGG: sse:Ssed_1617 hypothetical protein
YP_001761405.1	PFAM: protein of unknown function DUF541; KEGG: sse:Ssed_1616 protein of unknown function DUF541
YP_001761406.1	PFAM: Rhodanese domain protein; KEGG: slo:Shew_2442 rhodanese domain protein
YP_001761407.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: sse:Ssed_1611 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001761408.1	KEGG: sse:Ssed_1610 hypothetical protein
YP_001761409.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_001761410.1	PFAM: helix-turn-helix domain protein; KEGG: sse:Ssed_1608 transcriptional regulator, XRE family
YP_001761411.1	KEGG: sse:Ssed_1604 hypothetical protein
YP_001761412.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_001761413.1	KEGG: sse:Ssed_1602 hypothetical protein
YP_001761414.1	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions
YP_001761415.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_001761416.1	KEGG: sse:Ssed_1599 hypothetical protein
YP_001761417.1	PFAM: response regulator receiver; KEGG: bte:BTH_II0155 chemotaxis response regulator
YP_001761418.1	PFAM: Patatin; KEGG: sse:Ssed_1595 patatin
YP_001761419.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_1594 DEAD/DEAH box helicase domain protein
YP_001761420.1	PFAM: YHS domain protein; KEGG: amr:AM1_3134 hypothetical protein
YP_001761421.1	KEGG: sse:Ssed_1593 hypothetical protein
YP_001761422.1	PFAM: protein of unknown function DUF45; KEGG: spl:Spea_2626 protein of unknown function DUF45
YP_001761423.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sde:Sde_0802 AraC-type DNA-binding domain-containing proteins-like
YP_001761424.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: sde:Sde_2674 ribosome-binding factor A
YP_001761425.1	PFAM: peptidase M23B; KEGG: sse:Ssed_1590 peptidase M23B
YP_001761426.1	PFAM: SMC domain protein; KEGG: sse:Ssed_1589 exonuclease SbcC, putative
YP_001761427.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: sse:Ssed_1588 nuclease SbcCD, D subunit
YP_001761429.1	transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis
YP_001761430.1	KEGG: spl:Spea_2920 hypothetical protein
YP_001761431.1	PFAM: protein of unknown function DUF81; KEGG: sse:Ssed_1585 permease with 5 transmembrane domains
YP_001761432.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_1584 transcriptional regulator, LysR family
YP_001761433.1	PFAM: NERD domain protein; KEGG: sse:Ssed_1583 hypothetical protein
YP_001761434.1	PFAM: protein of unknown function DUF1260; KEGG: sse:Ssed_1582 protein of unknown function DUF1260
YP_001761435.1	KEGG: sse:Ssed_1581 RNA-binding S4 domain protein
YP_001761436.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_1580 GCN5-related N-acetyltransferase
YP_001761437.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sse:Ssed_1579 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001761438.1	PFAM: protein of unknown function DUF885; KEGG: sse:Ssed_1578 protein of unknown function DUF885
YP_001761439.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1577 diguanylate cyclase
YP_001761440.1	SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_1576 tetratricopeptide domain protein
YP_001761441.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: slo:Shew_2474 TonB family protein
YP_001761442.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slo:Shew_2475 biopolymer transport protein ExbD/TolR
YP_001761443.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slo:Shew_2476 MotA/TolQ/ExbB proton channel
YP_001761444.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: slo:Shew_2477 MotA/TolQ/ExbB proton channel
YP_001761445.1	KEGG: slo:Shew_2478 hypothetical protein
YP_001761448.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdn:Sden_2427 TonB-dependent receptor, plug
YP_001761449.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_1252 TonB-dependent receptor
YP_001761450.1	PFAM: porin Gram-negative type; KEGG: sse:Ssed_2557 porin, gram-negative type
YP_001761451.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C
YP_001761452.1	helicase involved in DNA repair and perhaps also replication
YP_001761453.1	PFAM: protein of unknown function DUF81; KEGG: sse:Ssed_1565 protein of unknown function DUF81
YP_001761454.1	KEGG: sse:Ssed_1564 primosomal replication protein N'', putative
YP_001761455.1	KEGG: sse:Ssed_1563 hypothetical protein
YP_001761456.1	KEGG: slo:Shew_2488 hypothetical protein
YP_001761459.1	KEGG: sse:Ssed_1561 competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1
YP_001761460.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sse:Ssed_1560 anion transporter
YP_001761461.1	PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sse:Ssed_1559 methionine gamma-lyase
YP_001761462.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_1558 hypothetical protein
YP_001761463.1	PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: sse:Ssed_1557 protein of unknown function DUF463, YcjX family protein
YP_001761464.1	TIGRFAM: phage shock protein C; PFAM: PspC domain protein; KEGG: sse:Ssed_1556 phage shock protein C, PspC
YP_001761465.1	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding
YP_001761466.1	TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; KEGG: slo:Shew_2496 phage shock protein A, PspA
YP_001761467.1	KEGG: sse:Ssed_1553 sigma54 specific transcriptional regulator, fis family; TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001761468.1	PFAM: extracellular solute-binding protein family 5; KEGG: sse:Ssed_1552 extracellular solute-binding protein, family 5
YP_001761469.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1551 binding-protein-dependent transport systems inner membrane component
YP_001761470.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1550 binding-protein-dependent transport systems inner membrane component
YP_001761471.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sse:Ssed_1549 oligopeptide/dipeptide ABC transporter, ATPase subunit
YP_001761472.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_1548 ABC transporter related
YP_001761473.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_001761474.1	PFAM: TOBE domain protein; KEGG: sse:Ssed_1546 TOBE domain protein
YP_001761475.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sse:Ssed_1545 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_001761476.1	PFAM: histone family protein DNA-binding protein; KEGG: slo:Shew_2505 histone family protein DNA-binding protein
YP_001761477.1	KEGG: sse:Ssed_1543 endopeptidase La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001761478.1	binds and unfolds substrates as part of the ClpXP protease
YP_001761479.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_001761480.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_001761481.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_001761482.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_001761483.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sse:Ssed_1537 peptidylprolyl isomerase
YP_001761484.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_001761485.1	PFAM: tRNA--hydroxylase; KEGG: sse:Ssed_1535 tRNA--hydroxylase
YP_001761486.1	PFAM: protein of unknown function DUF1282; KEGG: sse:Ssed_1534 protein of unknown function DUF1282
YP_001761487.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001761488.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: sse:Ssed_1532 ferrous iron transport protein B
YP_001761489.1	PFAM: FeoA family protein; KEGG: sse:Ssed_1531 FeoA family protein
YP_001761490.1	KEGG: spl:Spea_2697 decaheme cytochrome c
YP_001761491.1	KEGG: spl:Spea_2698 decaheme cytochrome c
YP_001761492.1	TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: sse:Ssed_1524 cytochrome c family protein
YP_001761493.1	KEGG: sse:Ssed_1523 outer membrane protein precursor MtrB
YP_001761494.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: sse:Ssed_1521 phage SPO1 DNA polymerase domain protein
YP_001761495.1	PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: shn:Shewana3_2681 peptidase M4, thermolysin
YP_001761496.1	PFAM: sugar diacid recognition domain protein; KEGG: sse:Ssed_1518 transcriptional regulator, CdaR
YP_001761497.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_1520 GGDEF domain-like protein
YP_001761498.1	PFAM: Lytic transglycosylase catalytic; KEGG: spl:Spea_4178 lytic transglycosylase catalytic
YP_001761499.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: sse:Ssed_2778 gluconate transporter
YP_001761500.1	PFAM: glycerate kinase; KEGG: sse:Ssed_2779 glycerate kinase
YP_001761501.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: sse:Ssed_2780 pyridoxal-dependent decarboxylase
YP_001761502.1	PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB0988 hypothetical protein
YP_001761503.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: chu:CHU_2470 hypothetical protein
YP_001761504.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sbn:Sbal195_1599 transcriptional regulator, AraC family
YP_001761505.1	PFAM: AzlC family protein; KEGG: slo:Shew_2538 AzlC family protein
YP_001761506.1	PFAM: branched-chain amino acid transport; KEGG: shm:Shewmr7_2596 branched-chain amino acid transport
YP_001761507.1	PFAM: NIPSNAP family containing protein; KEGG: slo:Shew_2540 NIPSNAP family containing protein
YP_001761508.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sse:Ssed_2785 helix-turn-helix, type 11 domain protein
YP_001761509.1	PFAM: transcription activator effector binding; KEGG: slo:Shew_2542 transcription activator, effector binding
YP_001761510.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_2787 glyoxalase family protein
YP_001761511.1	KEGG: sdn:Sden_0519 hypothetical protein
YP_001761512.1	KEGG: sse:Ssed_1463 hypothetical protein
YP_001761513.1	catalyzes the interconversion of chorismate to prephenate
YP_001761514.1	KEGG: sbn:Sbal195_3954 hypothetical protein
YP_001761515.1	KEGG: spl:Spea_2397 putative serine transporter
YP_001761516.1	TIGRFAM: lipoprotein; PFAM: protein of unknown function DUF285 lipoprotein; KEGG: sbm:Shew185_0166 putative outer membrane adhesin like proteiin
YP_001761517.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sse:Ssed_1517 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
YP_001761518.1	KEGG: slo:Shew_2546 hypothetical protein
YP_001761519.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_1515 pseudouridine synthase
YP_001761520.1	PFAM: protein of unknown function DUF1486; KEGG: amr:AM1_6204 hypothetical protein
YP_001761521.1	KEGG: spl:Spea_2732 hypothetical protein
YP_001761522.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sse:Ssed_1513 steroid dehydrogenase
YP_001761523.1	Catalyzes the specific recognition and activation of amino acids during peptide synthesis
YP_001761524.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_1511 alpha/beta hydrolase fold
YP_001761525.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001761526.1	KEGG: sse:Ssed_1509 hypothetical protein
YP_001761527.1	KEGG: sse:Ssed_1508 conserved hypothetical methyl-accepting chemotaxis protein
YP_001761528.1	PFAM: protein of unknown function DUF1289; KEGG: sse:Ssed_1507 protein of unknown function DUF1289
YP_001761529.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sse:Ssed_1506 HNH nuclease
YP_001761530.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: sse:Ssed_1505 choline/carnitine/betaine transporter
YP_001761531.1	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon
YP_001761532.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_001761533.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1502 phosphate ABC transporter, inner membrane subunit PstA
YP_001761534.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_1501 binding-protein-dependent transport systems inner membrane component
YP_001761535.1	PFAM: amino acid-binding ACT domain protein; KEGG: sse:Ssed_1500 amino acid-binding ACT domain protein
YP_001761536.1	KEGG: sse:Ssed_1499 hypothetical protein
YP_001761537.1	KEGG: son:SO_0182 hypothetical protein
YP_001761538.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO_0183 acetyltransferase, GNAT family
YP_001761539.1	PFAM: Tail Collar domain protein; KEGG: hau:Haur_4954 tail collar domain protein
YP_001761540.1	SMART: Dystroglycan-type cadherin domain protein; KEGG: sdn:Sden_3728 cadherin
YP_001761541.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: ppr:PBPRB0958 hypothetical protein
YP_001761542.1	PFAM: alpha/beta hydrolase fold; KEGG: sdn:Sden_1098 alpha/beta hydrolase fold
YP_001761543.1	KEGG: sfr:Sfri_3850 lipase chaperone-like protein
YP_001761544.1	KEGG: saz:Sama_1395 hypothetical protein
YP_001761545.1	KEGG: sse:Ssed_1494 hypothetical protein
YP_001761546.1	PFAM: protein of unknown function DUF1415; KEGG: sse:Ssed_1492 protein of unknown function DUF1415
YP_001761547.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: mxa:MXAN_7242 hypothetical protein
YP_001761549.1	KEGG: spl:Spea_3168 exporter of the RND superfamily protein-like protein
YP_001761550.1	PFAM: domain of unknown function DUF1745; KEGG: vvy:VV2963 hypothetical protein
YP_001761551.1	KEGG: vvu:VV1_1421 FOG: GGDEF domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001761552.1	PFAM: ribonuclease H; KEGG: sse:Ssed_1491 conserved hypothetical ribonuclease HI
YP_001761553.1	KEGG: sse:Ssed_1489 hypothetical protein
YP_001761554.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sse:Ssed_1488 leucyl aminopeptidase
YP_001761555.1	TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: spl:Spea_2763 nucleoside transporter
YP_001761556.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_1486 ABC transporter-related protein
YP_001761557.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sse:Ssed_1485 copper-translocating P-type ATPase
YP_001761558.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sse:Ssed_1484 putative transcriptional regulator, MerR family
YP_001761559.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sse:Ssed_1483 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001761560.1	KEGG: sse:Ssed_1482 hypothetical protein
YP_001761561.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001761562.1	KEGG: sse:Ssed_1478 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding
YP_001761563.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_1477 enoyl-CoA hydratase/isomerase
YP_001761564.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001761565.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_1475 butyryl-CoA dehydrogenase
YP_001761566.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_1474 methylmalonate-semialdehyde dehydrogenase
YP_001761567.1	KEGG: sse:Ssed_1473 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_001761569.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_001761570.1	KEGG: sse:Ssed_1471 hypothetical protein
YP_001761571.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sse:Ssed_1470 short-chain dehydrogenase/reductase SDR
YP_001761572.1	receptor for colicin S4
YP_001761573.1	PFAM: protein of unknown function DUF925; KEGG: sse:Ssed_1468 protein of unknown function DUF925
YP_001761574.1	KEGG: spl:Spea_2790 conserved hypothetical protein
YP_001761575.1	KEGG: sse:Ssed_1466 palmitoyl-CoA hydrolase; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_001761576.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sse:Ssed_1465 short-chain dehydrogenase/reductase SDR
YP_001761577.1	TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: sse:Ssed_1464 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_001761578.1	KEGG: sbn:Sbal195_1584 hypothetical protein
YP_001761579.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amr:AM1_6231 glyoxalase family protein
YP_001761580.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sil:SPO2245 hypothetical protein
YP_001761581.1	KEGG: spl:Spea_2913 hypothetical protein
YP_001761582.1	KEGG: spl:Spea_2913 hypothetical protein
YP_001761583.1	PFAM: peptidase U32; KEGG: ppr:PBPRA1758 putative collagenase family protease
YP_001761584.1	PFAM: Glutathione S-transferase domain; KEGG: ppr:PBPRA1656 putative glutathione S-transferase
YP_001761585.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_001761586.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_1460 AMP-dependent synthetase and ligase
YP_001761587.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: slo:Shew_2569 transcriptional regulator, MerR family
YP_001761588.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_1458 acyl-CoA dehydrogenase domain protein
YP_001761589.1	PFAM: carboxyl transferase; KEGG: spl:Spea_2798 propionyl-CoA carboxylase
YP_001761590.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_1456 enoyl-CoA hydratase/isomerase
YP_001761591.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sse:Ssed_1455 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001761592.1	PFAM: pyruvate carboxyltransferase; KEGG: sse:Ssed_1454 pyruvate carboxyltransferase
YP_001761593.1	KEGG: spl:Spea_2803 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_001761594.1	KEGG: sse:Ssed_1452 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_001761595.1	KEGG: sse:Ssed_1451 methylation site containing protein
YP_001761596.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: cps:CPS_3822 putative thioredoxin
YP_001761597.1	KEGG: sse:Ssed_1450 hypothetical protein
YP_001761598.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_001761599.1	PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: sse:Ssed_1447 Na+/H+ antiporter NhaC
YP_001761600.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: sse:Ssed_1446 electron transfer flavoprotein, alpha subunit
YP_001761601.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sse:Ssed_1445 electron transfer flavoprotein beta-subunit
YP_001761602.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: sse:Ssed_1444 histone family protein nucleoid-structuring protein H-NS
YP_001761603.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sse:Ssed_1443 amidohydrolase
YP_001761604.1	KEGG: sse:Ssed_1442 hypothetical protein
YP_001761605.1	KEGG: spl:Spea_2859 lipoprotein, putative
YP_001761606.1	PFAM: protein of unknown function UPF0066; KEGG: sse:Ssed_1440 protein of unknown function UPF0066
YP_001761607.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: spl:Spea_2861 transferase hexapeptide repeat containing protein
YP_001761608.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sfr:Sfri_2817 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001761609.1	KEGG: sdn:Sden_1058 hypothetical protein
YP_001761611.1	KEGG: shn:Shewana3_3390 hypothetical protein
YP_001761612.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: sbn:Sbal195_1860 peptidase S1 and S6 chymotrypsin/Hap
YP_001761613.1	KEGG: she:Shewmr4_0329 hypothetical protein
YP_001761614.1	PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sde:Sde_0575 hypothetical protein
YP_001761615.1	KEGG: sbn:Sbal195_2017 hypothetical protein
YP_001761616.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_001761617.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cps:CPS_2691 amidohydrolase family protein
YP_001761618.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: cps:CPS_2692 zinc carboxypeptidase family protein
YP_001761619.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_1520 TonB-dependent receptor
YP_001761620.1	PFAM: Na+/H+ antiporter NhaC; KEGG: sru:SRU_1137 Na+/H+ antiporter family
YP_001761621.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_2699 transcription regulator, LysR family
YP_001761622.1	PFAM: protein of unknown function DUF1611; KEGG: pat:Patl_2789 protein of unknown function DUF1611
YP_001761623.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pat:Patl_2790 mandelate racemase/muconate lactonizing enzyme-like
YP_001761624.1	KEGG: cps:CPS_2688 hypothetical protein
YP_001761625.1	PFAM: Patatin; KEGG: sse:Ssed_3141 patatin
YP_001761626.1	KEGG: sse:Ssed_3142 hypothetical protein
YP_001761627.1	PFAM: protein of unknown function DUF885; KEGG: sbm:Shew185_1465 protein of unknown function DUF885
YP_001761628.1	PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: sse:Ssed_3143 potassium efflux system protein
YP_001761629.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_3144 diguanylate cyclase
YP_001761630.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: sse:Ssed_3145 tRNA(Ile)-lysidine synthetase
YP_001761631.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_001761632.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_001761633.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_001761634.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_001761635.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_001761636.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_001761637.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: sse:Ssed_3152 outer membrane chaperone Skp (OmpH)
YP_001761638.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sse:Ssed_3153 surface antigen (D15)
YP_001761639.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: sse:Ssed_3154 putative membrane-associated zinc metalloprotease
YP_001761640.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_001761641.1	PFAM: phosphatidate cytidylyltransferase; KEGG: sse:Ssed_3156 phosphatidate cytidylyltransferase
YP_001761642.1	KEGG: sse:Ssed_3157 di-trans, poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_001761643.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_001761644.1	Catalyzes the phosphorylation of UMP to UDP
YP_001761645.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_001761646.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_001761647.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_001761648.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_001761649.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_001761650.1	KEGG: sse:Ssed_3165 hypothetical protein
YP_001761651.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_001761652.1	PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: sse:Ssed_3167 PTS system, glucose-like IIB subunint
YP_001761653.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_001761654.1	PFAM: pseudouridine synthase; KEGG: sse:Ssed_3169 pseudouridylate synthase
YP_001761655.1	PFAM: protein of unknown function DUF446; KEGG: sse:Ssed_3170 hypothetical protein
YP_001761656.1	KEGG: sse:Ssed_3171 hypothetical protein
YP_001761657.1	KEGG: sse:Ssed_3172 hypothetical protein
YP_001761658.1	KEGG: sfr:Sfri_1256 hypothetical protein
YP_001761659.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_3173 GCN5-related N-acetyltransferase
YP_001761660.1	KEGG: sse:Ssed_3174 hypothetical protein
YP_001761661.1	KEGG: spl:Spea_2898 conserved hypothetical protein
YP_001761662.1	KEGG: sse:Ssed_3176 hypothetical protein
YP_001761663.1	KEGG: sse:Ssed_3177 hypothetical protein
YP_001761664.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_001761665.1	PFAM: regulatory protein LysR; KEGG: sse:Ssed_3183 transcriptional regulator, LysR family
YP_001761666.1	PFAM: beta-lactamase domain protein; KEGG: sse:Ssed_3184 metallo-beta-lactamase superfamily protein
YP_001761667.1	KEGG: sse:Ssed_3185 hypothetical protein
YP_001761668.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: sse:Ssed_3186 4'-phosphopantetheinyl transferase
YP_001761669.1	KEGG: maq:Maqu_0016 hypothetical protein
YP_001761670.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sse:Ssed_1346 sigma 54 modulation protein/ribosomal protein S30EA
YP_001761671.1	KEGG: sse:Ssed_1345 hypothetical protein
YP_001761672.1	PFAM: PepSY-associated TM helix domain protein; KEGG: sse:Ssed_1344 PepSY-associated TM helix domain protein
YP_001761673.1	KEGG: sse:Ssed_1343 hypothetical protein
YP_001761675.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pat:Patl_1900 transcriptional regulator, AraC family
YP_001761676.1	PFAM: OsmC family protein; KEGG: she:Shewmr4_1145 OsmC family protein
YP_001761677.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mgm:Mmc1_3408 response regulator receiver modulated metal dependent phosphohydrolase
YP_001761678.1	KEGG: mgm:Mmc1_3409 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_001761679.1	PFAM: peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: sse:Ssed_1339 peptidase S41
YP_001761680.1	KEGG: sse:Ssed_1338 hypothetical protein
YP_001761681.1	KEGG: sse:Ssed_1336 hypothetical protein
YP_001761682.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sse:Ssed_1335 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001761683.1	PFAM: von Willebrand factor type A; KEGG: sbm:Shew185_1105 von Willebrand factor type A
YP_001761684.1	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport
YP_001761685.1	KEGG: pha:PSHAa1573 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_001761686.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_001761687.1	KEGG: ppr:PBPRB1696 hypothetical protein
YP_001761688.1	KEGG: sse:Ssed_1331 hypothetical protein
YP_001761689.1	KEGG: sse:Ssed_1330 hypothetical protein
YP_001761690.1	involved in the first step of glutathione biosynthesis
YP_001761691.1	PFAM: peptidase M16 domain protein; KEGG: sse:Ssed_1328 peptidase M16 domain protein
YP_001761692.1	PFAM: SNARE associated Golgi protein; KEGG: sse:Ssed_1327 hypothetical protein
YP_001761693.1	PFAM: sodium:dicarboxylate symporter; KEGG: sse:Ssed_1326 sodium:dicarboxylate symporter
YP_001761694.1	KEGG: sse:Ssed_1325 hypothetical protein
YP_001761695.1	PFAM: SEC-C motif domain protein; KEGG: sse:Ssed_1324 sec-C motif domain protein
YP_001761696.1	KEGG: sse:Ssed_1323 hypothetical protein
YP_001761697.1	KEGG: shm:Shewmr7_0819 hypothetical protein
YP_001761698.1	programmed frameshift; KEGG: spl:Spea_3706 transposase
YP_001761699.1	KEGG: sse:Ssed_1322 glutaconyl-CoA decarboxylase; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit
YP_001761700.1	catalyzes the formation of pyruvate from oxaloacetate
YP_001761701.1	TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; KEGG: sse:Ssed_1320 sodium pump decarboxylase, gamma subunit
YP_001761702.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_001761703.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_001761704.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_001761705.1	This protein performs the mismatch recognition step during the DNA repair process
YP_001761706.1	TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: sse:Ssed_1298 RNA polymerase, sigma 70 subunit, RpoD family
YP_001761707.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: sse:Ssed_1297 peptidase M23B
YP_001761708.1	KEGG: sse:Ssed_1296 protein-L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_001761709.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_001761710.1	PFAM: tRNA pseudouridine synthase D TruD; KEGG: sse:Ssed_1294 pseudouridylate synthase
YP_001761711.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_001761712.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_001761713.1	PFAM: Septum formation initiator; KEGG: sse:Ssed_1291 septum formation initiator
YP_001761714.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_001761715.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_001761716.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_001761717.1	KEGG: sse:Ssed_1287 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_001761718.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_001761719.1	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system
YP_001761720.1	PFAM: protein of unknown function DUF416; KEGG: sse:Ssed_1284 protein of unknown function DUF416
YP_001761721.1	KEGG: she:Shewmr4_1107 hypothetical protein
YP_001761722.1	PFAM: Auxin Efflux Carrier; KEGG: sse:Ssed_1282 auxin efflux carrier
YP_001761723.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: sse:Ssed_1281 DNA repair protein RecN
YP_001761724.1	PFAM: conserved hypothetical protein; KEGG: sfr:Sfri_3025 hypothetical protein
YP_001761725.1	PFAM: peptidase S45 penicillin amidase; KEGG: sse:Ssed_3220 penicillin amidase
YP_001761726.1	KEGG: sse:Ssed_3237 hypothetical protein
YP_001761727.1	KEGG: vha:VIBHAR_05811 hypothetical protein
YP_001761728.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: sse:Ssed_1596 alcohol dehydrogenase, zinc-binding domain protein
YP_001761729.1	PFAM: regulatory protein MarR; KEGG: slo:Shew_2562 transcriptional regulator, MarR family
YP_001761730.1	KEGG: sit:TM1040_3572 spermidine/putrescine-binding periplasmic protein-like
YP_001761731.1	KEGG: vvy:VV2399 hypothetical protein
YP_001761732.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vvu:VV1_2016 lactoylglutathione lyase
YP_001761733.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: vvy:VV2401 hypothetical protein
YP_001761734.1	KEGG: spl:Spea_0781 conserved hypothetical protein
YP_001761735.1	PFAM: Negative transcriptional regulator; KEGG: sfr:Sfri_0853 negative transcriptional regulator
YP_001761736.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_3936 acetyltransferase, GNAT family
YP_001761737.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: cps:CPS_3935 transcriptional regulator, GntR family
YP_001761738.1	KEGG: sfr:Sfri_3605 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001761739.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_3242 TonB-dependent receptor
YP_001761740.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: slo:Shew_2691 OmpA domain protein transmembrane region-containing protein
YP_001761741.1	KEGG: sse:Ssed_3243 hypothetical protein
YP_001761742.1	KEGG: sse:Ssed_3244 hypothetical protein
YP_001761743.1	PFAM: Propeptide PepSY amd peptidase M4; KEGG: sse:Ssed_3245 propeptide, PepSY amd peptidase M4
YP_001761744.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_3246 two component transcriptional regulator, winged helix family
YP_001761745.1	PFAM: ATP-binding region ATPase domain protein; KEGG: sse:Ssed_3247 sensor histidine kinase with ATPase domain
YP_001761746.1	KEGG: sse:Ssed_3248 hypothetical protein
YP_001761747.1	PFAM: transcriptional regulator domain protein; KEGG: sdn:Sden_3319 transcriptional regulatory protein-like protein
YP_001761748.1	PFAM: FG-GAP repeat protein; KEGG: sdn:Sden_3318 integrins alpha chain
YP_001761749.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_2702 GCN5-related N-acetyltransferase
YP_001761750.1	KEGG: sse:Ssed_2703 hypothetical protein
YP_001761752.1	KEGG: ecc:c1886 hypothetical protein
YP_001761754.1	KEGG: bay:RBAM_018820 YobK
YP_001761755.1	KEGG: sse:Ssed_3249 hypothetical protein
YP_001761756.1	KEGG: sse:Ssed_3250 cyclic nucleotide-binding protein
YP_001761757.1	PFAM: Catalase domain protein; KEGG: sse:Ssed_3251 catalase
YP_001761758.1	PFAM: Ankyrin; KEGG: spl:Spea_0126 ankyrin
YP_001761759.1	PFAM: peptidase domain protein; Endonuclease I; KEGG: slo:Shew_3021 endonuclease I
YP_001761760.1	KEGG: spl:Spea_2394 coproporphyrinogen dehydrogenase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_001761761.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_3255 GCN5-related N-acetyltransferase
YP_001761762.1	PFAM: chemotaxis sensory transducer; KEGG: spc:Sputcn32_2723 methyl-accepting chemotaxis sensory transducer
YP_001761763.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761764.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_001761765.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_001761766.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761767.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761768.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761769.1	PFAM: Amidohydrolase 3; KEGG: sse:Ssed_3258 amidohydrolase 3
YP_001761770.1	PFAM: ApbE family lipoprotein; KEGG: shm:Shewmr7_2151 ApbE family lipoprotein
YP_001761771.1	PFAM: natural resistance-associated macrophage protein; KEGG: gfo:GFO_2124 manganese transport protein MntH
YP_001761772.1	KEGG: sse:Ssed_3263 hypothetical protein
YP_001761773.1	KEGG: vha:VIBHAR_05537 hypothetical protein
YP_001761774.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sse:Ssed_3265 conserved hypothetical ribosomal small subunit pseudouridine synthase A
YP_001761775.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_3266 putative uncharacterized dehydrogenase
YP_001761776.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_3267 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001761778.1	PFAM: Lipoxygenase; KEGG: bte:BTH_I2353 arachidonate 15-lipoxygenase precursor (15-LOX)
YP_001761779.1	PFAM: glycoside hydrolase starch-binding; cell surface receptor IPT/TIG domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; KEGG: spb:M28_Spy1046 alpha-amylase
YP_001761780.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_0517 methyltransferase type 11
YP_001761781.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ctc:CTC00153 transcriptional regulatory protein
YP_001761785.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_001761786.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_3272 major facilitator superfamily MFS_1
YP_001761787.1	PFAM: cyclic nucleotide-binding; KEGG: sse:Ssed_3273 cyclic nucleotide binding protein, putative
YP_001761788.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sse:Ssed_3278 hypothetical protein
YP_001761789.1	KEGG: pat:Patl_3781 hypothetical protein
YP_001761790.1	KEGG: sse:Ssed_3283 O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_001761791.1	PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: slo:Shew_2713 metal dependent phosphohydrolase
YP_001761792.1	PFAM: PKD domain containing protein; MAM protein; Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: xcv:XCV1064 putative secreted protein
YP_001761793.1	KEGG: slo:Shew_2714 hypothetical protein
YP_001761794.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: sse:Ssed_3290 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001761795.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_3291 hypothetical protein
YP_001761796.1	PFAM: regulatory protein TetR; KEGG: shn:Shewana3_2864 transcriptional regulator, TetR family
YP_001761797.1	PFAM: Glutathione S-transferase domain; KEGG: slo:Shew_2730 glutathione S-transferase, C-terminal domain
YP_001761798.1	PFAM: Glutathione S-transferase domain; KEGG: ppr:PBPRB0681 putative glutathione S-transferase
YP_001761799.1	PFAM: protein of unknown function DUF437; KEGG: vpa:VPA1414 hypothetical protein
YP_001761800.1	KEGG: spl:Spea_3406 putative periplasmic ligand-binding sensor protein
YP_001761801.1	PFAM: thiopurine S-methyltransferase; KEGG: cps:CPS_3096 thiopurine S-methyltransferase family protein
YP_001761802.1	PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: bpd:BURPS668_0035 transcriptional regulator, MerR family
YP_001761803.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: sdn:Sden_1110 cupin 2, conserved barrel
YP_001761804.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spc:Sputcn32_1375 GCN5-related N-acetyltransferase
YP_001761805.1	PFAM: Fmu (Sun) domain protein; KEGG: sse:Ssed_3295 Fmu (Sun) domain protein
YP_001761807.1	KEGG: spl:Spea_1582 conserved hypothetical protein
YP_001761808.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: sse:Ssed_3296 diguanylate cyclase
YP_001761809.1	PFAM: YfaZ family protein; KEGG: sse:Ssed_3297 YfaZ family protein
YP_001761810.1	PFAM: glutathione peroxidase; KEGG: sse:Ssed_3298 glutathione peroxidase
YP_001761811.1	PFAM: Peptidase M1 membrane alanine aminopeptidase ; Leukotriene A4 hydrolase; KEGG: sse:Ssed_3299 peptidase M1, membrane alanine aminopeptidase
YP_001761812.1	PFAM: Peptidase M9A collagenase domain protein; KEGG: sse:Ssed_3300 microbial collagenase
YP_001761813.1	TIGRFAM: phosphate binding protein; KEGG: sse:Ssed_3301 phosphate binding protein
YP_001761814.1	TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: sse:Ssed_3302 putative PAS/PAC sensor protein
YP_001761815.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_3303 two component transcriptional regulator, winged helix family
YP_001761816.1	PFAM: porin Gram-negative type; KEGG: slo:Shew_2750 porin, gram-negative type
YP_001761817.1	Required for efficient pilin antigenic variation
YP_001761818.1	PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sse:Ssed_3307 peptidase M61 domain protein
YP_001761819.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_3308 tetratricopeptide TPR_2 repeat protein
YP_001761820.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_3309 diguanylate cyclase
YP_001761821.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_3310 hypothetical protein
YP_001761822.1	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups
YP_001761823.1	KEGG: sse:Ssed_3312 hypothetical protein
YP_001761824.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aha:AHA_0770 3-oxoacyl-[acyl-carrier-protein] reductase
YP_001761825.1	KEGG: sse:Ssed_3315 hypothetical protein
YP_001761826.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sse:Ssed_3317 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001761827.1	catalyzes the formation of 2-oxoglutarate from isocitrate
YP_001761828.1	programmed frameshift; KEGG: spl:Spea_3706 transposase
YP_001761829.1	KEGG: sse:Ssed_3319 hypothetical protein
YP_001761830.1	PFAM: protein of unknown function DUF423; KEGG: spl:Spea_2982 protein of unknown function DUF423
YP_001761831.1	KEGG: sse:Ssed_3321 dienelactone hydrolase
YP_001761832.1	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence
YP_001761833.1	KEGG: sse:Ssed_3323 hypothetical protein
YP_001761834.1	Required for the synthesis of the thiazole moiety
YP_001761835.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_001761836.1	Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.
YP_001761837.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: sse:Ssed_3327 exodeoxyribonuclease VII, small subunit
YP_001761838.1	PFAM: Polyprenyl synthetase; KEGG: sse:Ssed_3328 polyprenyl synthetase
YP_001761839.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_001761840.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_001761841.1	catalyzes the phosphorylation of NAD to NADP
YP_001761842.1	TIGRFAM: TonB family protein; KEGG: sse:Ssed_3332 TonB family protein
YP_001761843.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: sse:Ssed_3333 multi antimicrobial extrusion protein MatE
YP_001761844.1	PFAM: cobalamin synthesis protein P47K; KEGG: sse:Ssed_3334 cobalamin synthesis protein, P47K
YP_001761845.1	KEGG: sse:Ssed_3335 hypothetical protein
YP_001761846.1	KEGG: ppr:PBPRB1292 hypothetical protein
YP_001761847.1	PFAM: RES domain protein; KEGG: psa:PST_2104 hypothetical protein
YP_001761848.1	KEGG: psp:PSPPH_4231 hypothetical protein
YP_001761849.1	KEGG: spc:Sputcn32_0911 hypothetical protein
YP_001761851.1	KEGG: spc:Sputcn32_1797 hypothetical protein
YP_001761855.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pat:Patl_3756 transposase IS116/IS110/IS902
YP_001761858.1	KEGG: sbm:Shew185_1686 hypothetical protein
YP_001761863.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: spl:Spea_2276 radical SAM domain protein
YP_001761864.1	KEGG: spl:Spea_3264 conserved hypothetical protein
YP_001761865.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_3336 DEAD/DEAH box helicase domain protein
YP_001761866.1	KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001761867.1	KEGG: sse:Ssed_3338 conserved hypothetical amino acid ABC transporter
YP_001761868.1	KEGG: sse:Ssed_3339 thioesterase superfamily protein
YP_001761869.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sse:Ssed_3340 diguanylate cyclase/phosphodiesterase
YP_001761870.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: sse:Ssed_3341 putative signal transduction protein
YP_001761871.1	PFAM: peptidase U32; KEGG: sse:Ssed_3342 peptidase U32
YP_001761872.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_3343 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001761873.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: sse:Ssed_3346 response regulator/GGDEF domain protein
YP_001761874.1	PFAM: Sterol-binding domain protein; KEGG: sse:Ssed_3349 hypothetical protein
YP_001761875.1	PFAM: peptidase U32; KEGG: sse:Ssed_3350 peptidase U32
YP_001761876.1	PFAM: peptidase U32; KEGG: sse:Ssed_3351 peptidase U32
YP_001761877.1	KEGG: sse:Ssed_3352 hypothetical protein
YP_001761878.1	KEGG: spl:Spea_3023 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001761879.1	PFAM: nucleoside recognition domain protein; KEGG: sse:Ssed_3353 nucleoside recognition domain protein
YP_001761880.1	PFAM: ATP-binding region ATPase domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; KEGG: sse:Ssed_3354 PAS/PAC sensor signal transduction histidine kinase
YP_001761881.1	PFAM: CBS domain containing protein; KEGG: sse:Ssed_3355 CBS domain containing protein
YP_001761882.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sse:Ssed_3356 xanthine/uracil/vitamin C permease
YP_001761883.1	TIGRFAM: trimethylamine N-oxide reductase system, TorE protein; PFAM: periplasmic nitrate reductase NapE; KEGG: slo:Shew_2796 periplasmic nitrate reductase NapE
YP_001761884.1	TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sse:Ssed_3359 trimethylamine-N-oxide reductase C-type cytochrome TorC
YP_001761885.1	TIGRFAM: trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sse:Ssed_3360 trimethylamine-N-oxide reductase TorA
YP_001761886.1	TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor
YP_001761887.1	PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: she:Shewmr4_2704 MgtE intracellular region
YP_001761888.1	PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_3364 DEAD/DEAH box helicase domain protein
YP_001761889.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: syr:SynRCC307_0915 uncharacterized protein with hemolysin-type calcium-binding regions
YP_001761890.1	KEGG: spl:Spea_3030 hypothetical protein
YP_001761891.1	TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sse:Ssed_3365 multi-sensor hybrid histidine kinase
YP_001761892.1	periplasmic sensory protein associated with the TorRS two-component regulatory system
YP_001761893.1	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes
YP_001761894.1	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_3368 type IV pilus assembly PilZ
YP_001761895.1	KEGG: vpa:VP1370 hypothetical protein
YP_001761896.1	KEGG: fjo:Fjoh_4073 hypothetical protein
YP_001761899.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_001761900.1	PFAM: type IV pilus assembly PilZ; KEGG: sse:Ssed_3371 type IV pilus assembly PilZ
YP_001761901.1	PFAM: putative esterase; KEGG: slo:Shew_1666 putative esterase
YP_001761902.1	KEGG: sse:Ssed_3372 alpha/beta hydrolase fold
YP_001761903.1	KEGG: sse:Ssed_3373 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_001761904.1	KEGG: sse:Ssed_3374 membrane protein
YP_001761905.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_001761906.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_001761907.1	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
YP_001761908.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_001761909.1	PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: son:SO_1215 outer membrane protein OmpK, putative
YP_001761910.1	TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: sse:Ssed_3380 nucleoside transporter
YP_001761911.1	PFAM: TatD-related deoxyribonuclease; KEGG: sse:Ssed_3381 TatD-related deoxyribonuclease
YP_001761912.1	KEGG: shw:Sputw3181_1185 hypothetical protein
YP_001761913.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_001761914.1	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing
YP_001761915.1	KEGG: sse:Ssed_3384 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_001761916.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_3385 diguanylate cyclase/phosphodiesterase
YP_001761917.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_001761918.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_001761919.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_001761920.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_001761921.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_001761922.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_001761923.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: sse:Ssed_3392 preprotein translocase, SecG subunit
YP_001761924.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_001761925.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_001761926.1	KEGG: sse:Ssed_3395 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_001761927.1	KEGG: sse:Ssed_3396 microtubule-severing ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001761928.1	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit
YP_001761929.1	PFAM: protein of unknown function UPF0044; KEGG: sse:Ssed_3398 protein of unknown function UPF0044
YP_001761930.1	TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: sse:Ssed_3399 protein-export membrane protein SecF
YP_001761931.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_001761932.1	KEGG: sse:Ssed_3401 hypothetical protein
YP_001761933.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sse:Ssed_3402 transcription elongation factor GreA
YP_001761934.1	PFAM: conserved hypothetical protein; KEGG: cps:CPS_0478 hypothetical protein
YP_001761935.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: vvy:VVA0893 methyl-accepting chemotaxis protein
YP_001761936.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_001761937.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_001761938.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_001761939.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: sse:Ssed_3406 peptidylprolyl isomerase, FKBP-type
YP_001761940.1	PFAM: peptidase M48 Ste24p; KEGG: sse:Ssed_3407 peptidase M48, Ste24p
YP_001761941.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_001761942.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_001761943.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sse:Ssed_3410 protein of unknown function DUF6, transmembrane
YP_001761944.1	KEGG: sse:Ssed_3411 hypothetical protein
YP_001761945.1	KEGG: sse:Ssed_3411 hypothetical protein
YP_001761949.1	KEGG: vpa:VPA0209 hexapeptide-repeat containing-acetyltransferase
YP_001761951.1	SMART: helix-turn-helix domain protein; KEGG: btl:BALH_2688 transcriptional regulator, Cro/CI family
YP_001761952.1	PFAM: PKD domain containing protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: cps:CPS_1835 serine protease, trypsin family
YP_001761953.1	KEGG: cps:CPS_1836 putative lipoprotein
YP_001761954.1	PFAM: beta-lactamase domain protein; KEGG: sse:Ssed_3414 beta-lactamase
YP_001761955.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bha:BH1205 hypothetical protein
YP_001761956.1	KEGG: spl:Spea_2434 hypothetical protein
YP_001761957.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_001761958.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_001761959.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sse:Ssed_3417 xanthine/uracil/vitamin C permease
YP_001761960.1	KEGG: slo:Shew_2850 hypothetical protein
YP_001761961.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sse:Ssed_3420 peptidase M17, leucyl aminopeptidase domain protein
YP_001761962.1	KEGG: sse:Ssed_3421 Xaa-His dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_001761963.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_001761964.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shn:Shewana3_0948 methyl-accepting chemotaxis sensory transducer
YP_001761966.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: slo:Shew_2872 bacterioferritin
YP_001761967.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: spl:Spea_3095 bacterioferritin
YP_001761968.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_3423 GGDEF domain-like protein
YP_001761969.1	PFAM: protein of unknown function DUF539; KEGG: slo:Shew_2874 protein of unknown function DUF539
YP_001761970.1	PFAM: ApbE family lipoprotein; KEGG: sse:Ssed_3425 ApbE family lipoprotein
YP_001761971.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761972.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_001761973.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_001761974.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761975.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761976.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_001761977.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_001761978.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: saz:Sama_2542 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
YP_001761979.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: saz:Sama_2543 conserved hypothetical permease component of C4 dicarboxylatetransporter
YP_001761980.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: saz:Sama_2544 TRAP-type transport system, small permease component
YP_001761981.1	PFAM: BolA family protein; KEGG: spl:Spea_3105 BolA family protein
YP_001761982.1	KEGG: sse:Ssed_3434 glycine cleavage system regulatory protein-like protein
YP_001761983.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: spc:Sputcn32_0935 2OG-Fe(II) oxygenase
YP_001761984.1	PFAM: methyltransferase small; KEGG: sse:Ssed_3436 rRNA (guanine-N(2)-)-methyltransferase
YP_001761986.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO_1890 hypothetical protein
YP_001761987.1	KEGG: sde:Sde_1498 hypothetical protein
YP_001761988.1	KEGG: sfr:Sfri_0530 hypothetical protein
YP_001761989.1	KEGG: sse:Ssed_3437 OmpA-like transmembrane domain protein
YP_001761990.1	PFAM: acyl-CoA reductase; KEGG: vfi:VFA0923 LuxC, acyl-CoA reductase
YP_001761991.1	part of the fatty acid reductase system required for aldehyde biosynthesis; produces fatty acids for the luminescent reaction
YP_001761992.1	PFAM: luciferase family protein; KEGG: vfi:VFA0921 LuxA, luciferase alpha chain
YP_001761993.1	PFAM: luciferase family protein; KEGG: vfi:VFA0920 LuxB, luciferase beta chain
YP_001761994.1	PFAM: acyl-protein synthetase LuxE; KEGG: vfi:VFA0919 LuxE, long-chain-fatty-acid ligase
YP_001761995.1	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin
YP_001761996.1	KEGG: sse:Ssed_3438 hypothetical protein
YP_001761997.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: shn:Shewana3_0787 OmpA-like transmembrane domain protein
YP_001761998.1	PFAM: Uncharacterized lipoprotein; KEGG: sse:Ssed_3439 uncharacterized lipoprotein
YP_001761999.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sse:Ssed_3440 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_001762000.1	KEGG: sse:Ssed_3441 hypothetical protein
YP_001762001.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_3442 major facilitator superfamily MFS_1
YP_001762003.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_001762004.1	PFAM: VanZ family protein; KEGG: sse:Ssed_3444 VanZ family protein
YP_001762005.1	KEGG: sse:Ssed_3445 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_001762006.1	PFAM: sodium:neurotransmitter symporter; KEGG: sse:Ssed_3446 putative sodium-dependent transporter
YP_001762007.1	PFAM: sulfatase; KEGG: rba:RB6599 arylsulfatase A
YP_001762008.1	PFAM: sulfatase; KEGG: ypi:YpsIP31758_1263 sulfatase
YP_001762009.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpd:RPD_2526 tetratricopeptide TPR_2
YP_001762010.1	KEGG: dra:DR_1805 hypothetical protein
YP_001762011.1	PFAM: sulfatase; KEGG: rba:RB6599 arylsulfatase A
YP_001762012.1	PFAM: sulfatase; KEGG: sus:Acid_1241 sulfatase
YP_001762013.1	KEGG: bth:BT_4251 hypothetical protein
YP_001762014.1	PFAM: sulfatase; KEGG: rba:RB4017 probable sulfatase
YP_001762015.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_2359 TonB-dependent receptor
YP_001762016.1	PFAM: sulfatase; KEGG: bvu:BVU_1159 sulfatase
YP_001762017.1	PFAM: sulfatase; KEGG: pat:Patl_1842 sulfatase
YP_001762018.1	PFAM: sulfatase; KEGG: rba:RB1477 arylsulfatase
YP_001762019.1	TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: pin:Ping_2017 galactokinase
YP_001762020.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: asa:ASA_2390 UDP-glucose 4-epimerase
YP_001762021.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: shn:Shewana3_2088 hypothetical protein
YP_001762022.1	PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: ccr:CC_0785 hypothetical protein
YP_001762023.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pat:Patl_3529 short-chain dehydrogenase/reductase SDR
YP_001762024.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sde:Sde_1092 transcriptional regulator, GntR family
YP_001762025.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2897 transcriptional regulator, LysR family
YP_001762026.1	PFAM: protein of unknown function DUF413; KEGG: slo:Shew_2898 protein of unknown function DUF413
YP_001762027.1	PFAM: protein of unknown function DUF1704; KEGG: slo:Shew_2900 protein of unknown function DUF1704
YP_001762028.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: sse:Ssed_3447 phosphoesterase, PA-phosphatase related
YP_001762029.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sse:Ssed_3448 hypothetical protein
YP_001762030.1	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: spl:Spea_3120 AbgT putative transporter
YP_001762031.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_001762032.1	PFAM: protein of unknown function DUF819; KEGG: sse:Ssed_3451 protein of unknown function DUF819
YP_001762033.1	KEGG: sse:Ssed_3452 hypothetical protein
YP_001762034.1	PFAM: Invasion gene expression up-regulator SirB; KEGG: sse:Ssed_3453 invasion gene expression up-regulator, SirB
YP_001762035.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_3455 GCN5-related N-acetyltransferase
YP_001762036.1	KEGG: dra:DR_1805 hypothetical protein
YP_001762038.1	PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: she:Shewmr4_1444 transposase, IS204/IS1001/IS1096/IS1165 family protein
YP_001762039.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: sse:Ssed_3458 modification methylase, HemK family
YP_001762040.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_001762041.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_001762042.1	PFAM: outer membrane lipoprotein LolB; KEGG: sse:Ssed_3461 outer membrane lipoprotein LolB
YP_001762043.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_001762044.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_001762045.1	KEGG: spl:Spea_3131 conserved hypothetical protein
YP_001762046.1	KEGG: spl:Spea_3132 conserved hypothetical protein
YP_001762047.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_001762048.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_001762049.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sse:Ssed_3469 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_001762050.1	KEGG: sse:Ssed_3470 hypothetical protein
YP_001762051.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_001762052.1	PFAM: PhoH family protein; KEGG: sse:Ssed_3472 PhoH family protein
YP_001762053.1	PFAM: protein of unknown function UPF0054; KEGG: sse:Ssed_3473 protein of unknown function UPF0054
YP_001762054.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: sse:Ssed_3474 CBS domain containing protein
YP_001762055.1	Transfers the fatty acyl group on membrane lipoproteins
YP_001762056.1	PFAM: protein of unknown function DUF1451; KEGG: sse:Ssed_3478 protein of unknown function DUF1451
YP_001762057.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_001762058.1	PFAM: Rare lipoprotein B; KEGG: sse:Ssed_3480 rare lipoprotein B
YP_001762059.1	KEGG: sse:Ssed_3481 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta
YP_001762060.1	KEGG: sse:Ssed_3482 adenosine deaminase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_001762061.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: slo:Shew_2933 iojap-like protein
YP_001762062.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_001762063.1	KEGG: sse:Ssed_3485 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_001762064.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: sse:Ssed_3486 rod shape-determining protein RodA
YP_001762065.1	TIGRFAM: lytic murein transglycosylase B; KEGG: sse:Ssed_3487 lytic murein transglycosylase B
YP_001762066.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: sse:Ssed_3488 rare lipoprotein A
YP_001762067.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: sse:Ssed_3489 serine-type D-Ala-D-Ala carboxypeptidase
YP_001762068.1	PFAM: protein of unknown function DUF493; KEGG: sse:Ssed_3490 protein of unknown function DUF493
YP_001762069.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_001762070.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_001762071.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_3493 ribosomal-protein-alanine acetyltransferase
YP_001762072.1	KEGG: sse:Ssed_3494 hypothetical protein
YP_001762073.1	KEGG: sse:Ssed_3495 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_001762074.1	KEGG: sse:Ssed_3496 hypothetical protein
YP_001762075.1	KEGG: sse:Ssed_3497 ATPase AAA-2 domain protein; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_001762076.1	PFAM: protein of unknown function DUF152; KEGG: sse:Ssed_3498 protein of unknown function DUF152
YP_001762077.1	KEGG: sse:Ssed_3499 lysozyme; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_001762078.1	KEGG: sse:Ssed_3500 putative lipoprotein
YP_001762079.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; CHASE4 domain protein; KEGG: sse:Ssed_3501 diguanylate cyclase
YP_001762080.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_3502 methyl-accepting chemotaxis sensory transducer
YP_001762081.1	catalyzes the formation of L-proline from L-ornithine
YP_001762082.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sse:Ssed_3504 RNA polymerase, sigma-24 subunit, ECF subfamily
YP_001762083.1	KEGG: sse:Ssed_3505 hypothetical protein
YP_001762084.1	KEGG: sse:Ssed_3506 hypothetical protein
YP_001762085.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sse:Ssed_3507 pseudouridine synthase
YP_001762086.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_3556 transcriptional regulator, LysR family
YP_001762087.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: slo:Shew_2988 putative signal transduction protein
YP_001762088.1	PFAM: lipolytic protein G-D-S-L family; KEGG: sse:Ssed_3558 lipolytic enzyme, G-D-S-L
YP_001762089.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_3206 TonB-dependent receptor plug
YP_001762090.1	KEGG: sse:Ssed_3560 hypothetical protein
YP_001762091.1	PFAM: Penicillinase repressor; KEGG: slo:Shew_2994 transcriptional repressor, CopY family
YP_001762092.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; peptidase M56 BlaR1; KEGG: spl:Spea_3209 TonB family protein
YP_001762093.1	PFAM: protein of unknown function DUF805; KEGG: slo:Shew_2991 protein of unknown function DUF805
YP_001762094.1	TIGRFAM: azurin; PFAM: blue (type 1) copper domain protein; KEGG: sbn:Sbal195_3772 azurin
YP_001762095.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: slo:Shew_2992 amidohydrolase
YP_001762096.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pen:PSEEN2438 sigma-54 dependent transcriptional regulator
YP_001762097.1	KEGG: tdn:Tmden_1970 short-chain dehydrogenase/reductase SDR
YP_001762098.1	KEGG: rno:678915 hypothetical protein LOC678915
YP_001762099.1	PFAM: carbohydrate kinase FGGY; KEGG: tdn:Tmden_1477 carbohydrate kinase, FGGY
YP_001762100.1	PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: bcz:BCZK2699 conserved hypothetical protein; possible polyketide synthesis domain protein
YP_001762101.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: cps:CPS_1260 putative nitrate/nitrite DNA-binding response regulator
YP_001762102.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cps:CPS_1261 sensor histidine kinase
YP_001762103.1	PFAM: Cache type 2 domain protein; KEGG: pmy:Pmen_0084 integral membrane sensor signal transduction histidine kinase
YP_001762104.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: cps:CPS_1404 extracellular solute-binding protein, family 7
YP_001762105.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: cps:CPS_1403 C4-dicarboxylate transporter family protein, DctQ subunit
YP_001762106.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: maq:Maqu_3479 TRAP dicarboxylate transporter, DctM subunit
YP_001762107.1	KEGG: slo:Shew_2612 hypothetical protein
YP_001762108.1	PFAM: NADPH-dependent FMN reductase; KEGG: sse:Ssed_3574 hypothetical protein
YP_001762109.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_3576 carbonate dehydratase
YP_001762110.1	PFAM: alpha/beta hydrolase fold; KEGG: sfr:Sfri_3950 alpha/beta hydrolase fold
YP_001762111.1	SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_3583 extracellular solute-binding protein, family 3
YP_001762112.1	KEGG: sse:Ssed_3591 hypothetical protein
YP_001762113.1	KEGG: sse:Ssed_3593 hypothetical protein
YP_001762114.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: spl:Spea_3335 bifunctional deaminase-reductase domain protein
YP_001762115.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_001762116.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_0815 two component transcriptional regulator, winged helix family
YP_001762117.1	KEGG: sse:Ssed_0816 hypothetical protein
YP_001762118.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive
YP_001762119.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sse:Ssed_0818 succinylglutamate desuccinylase/aspartoacylase
YP_001762120.1	KEGG: she:Shewmr4_3142 hypothetical protein
YP_001762121.1	PFAM: protease-associated PA domain protein; KEGG: shn:Shewana3_0797 protease-associated PA domain protein
YP_001762122.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; peptidase domain protein; KEGG: shm:Shewmr7_0825 protease-associated PA domain protein
YP_001762123.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sse:Ssed_0814 peptidase S9B, dipeptidylpeptidase IV domain protein
YP_001762124.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_001762127.1	PFAM: protein of unknown function DUF1568; KEGG: spl:Spea_2922 protein of unknown function DUF1568
YP_001762128.1	KEGG: spl:Spea_0724 conserved hypothetical protein
YP_001762129.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001762130.1	KEGG: sse:Ssed_3877 succinate dehydrogenase; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_001762131.1	PFAM: ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; KEGG: sse:Ssed_3878 histidine kinase
YP_001762132.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: sse:Ssed_3879 two component, sigma54 specific, transcriptional regulator, fis family protein
YP_001762133.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_3880 signal transduction histidine kinase regulating C4-dicarboxylate transport system-like protein
YP_001762134.1	KEGG: sse:Ssed_3881 putative aliphatic amidase expression-regulating protein
YP_001762135.1	PFAM: sodium:dicarboxylate symporter; KEGG: sse:Ssed_3882 sodium:dicarboxylate symporter
YP_001762136.1	KEGG: sse:Ssed_3883 hypothetical protein
YP_001762137.1	KEGG: sse:Ssed_3884 hypothetical protein
YP_001762138.1	KEGG: sse:Ssed_3885 hypothetical protein
YP_001762139.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sse:Ssed_3886 amino acid carrier protein
YP_001762140.1	KEGG: sse:Ssed_3887 hypothetical protein
YP_001762141.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_0713 TonB-dependent receptor
YP_001762142.1	PFAM: phosphate-selective porin O and P; KEGG: sse:Ssed_3889 phosphate-selective porin O and P
YP_001762143.1	KEGG: sse:Ssed_3890 FMN-binding domain protein
YP_001762144.1	PFAM: PepSY-associated TM helix domain protein; KEGG: sse:Ssed_3891 PepSY-associated TM helix domain protein
YP_001762145.1	PFAM: major facilitator superfamily MFS_1; KEGG: spl:Spea_0707 major facilitator superfamily MFS_1
YP_001762146.1	KEGG: sse:Ssed_3894 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_001762147.1	KEGG: sse:Ssed_3895 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_001762148.1	PFAM: Phosphoesterase HXTX; KEGG: sse:Ssed_3896 2'-5' RNA ligase
YP_001762149.1	PFAM: transcriptional regulator domain protein; KEGG: spl:Spea_0701 transcriptional regulator, CadC
YP_001762150.1	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
YP_001762151.1	Regulatory factor involved in maltose metabolism
YP_001762152.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: sse:Ssed_3899 transcriptional regulator, TraR/DksA family
YP_001762153.1	PFAM: glutamyl-tRNA synthetase class Ic; KEGG: spl:Spea_0697 glutamyl-tRNA synthetase class Ic
YP_001762154.1	KEGG: sse:Ssed_3901 polynucleotide adenylyltransferase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region
YP_001762155.1	KEGG: sse:Ssed_3902 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_001762156.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_001762157.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_001762158.1	KEGG: shw:Sputw3181_0809 hypothetical protein
YP_001762160.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sfr:Sfri_0071 TPR repeat-containing protein
YP_001762161.1	PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: son:SO_A0049 toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative
YP_001762162.1	PFAM: secretion protein HlyD family protein; KEGG: bmu:Bmul_1957 secretion protein HlyD family protein
YP_001762163.1	KEGG: lpc:LPC_2246 hypothetical protein
YP_001762165.1	KEGG: lpc:LPC_2246 hypothetical protein
YP_001762169.1	KEGG: sse:Ssed_3907 hypothetical protein
YP_001762170.1	PFAM: ABC-2 type transporter; KEGG: spl:Spea_0690 ABC-2 type transporter
YP_001762171.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3909 ABC transporter-related protein
YP_001762172.1	KEGG: sse:Ssed_3910 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_001762173.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: sse:Ssed_3911 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_001762174.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sse:Ssed_3912 UDP-N-acetylmuramate
YP_001762175.1	KEGG: sbl:Sbal_3758 hypothetical protein
YP_001762176.1	KEGG: vpa:VP1434 putative V10 pilin
YP_001762177.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sse:Ssed_3915 response regulator receiver modulated metal dependent phosphohydrolase
YP_001762178.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vpa:VPA1115 hypothetical protein
YP_001762179.1	PFAM: sodium/hydrogen exchanger; KEGG: sse:Ssed_3919 cyclic nucleotide-binding protein
YP_001762180.1	PFAM: protein of unknown function DUF541; KEGG: sse:Ssed_3918 protein of unknown function DUF541
YP_001762181.1	programmed frameshift; KEGG: spl:Spea_3706 transposase
YP_001762182.1	PFAM: Disulphide bond formation protein DsbB; KEGG: spl:Spea_3914 disulphide bond formation protein DsbB
YP_001762183.1	SMART: metal-dependent phosphohydrolase HD region; KEGG: vch:VCA0895 chemotactic transducer-related protein
YP_001762184.1	KEGG: sse:Ssed_3554 hypothetical protein
YP_001762185.1	KEGG: sse:Ssed_3553 hypothetical protein
YP_001762186.1	KEGG: pat:Patl_3302 hypothetical protein
YP_001762187.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_001762188.1	PFAM: FecR protein; KEGG: cps:CPS_0244 putative regulatory protein
YP_001762189.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cps:CPS_0243 putative RNA polymerase sigma-70 factor FecI
YP_001762190.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sde:Sde_2390 argininosuccinate synthase
YP_001762191.1	PFAM: tryptophan halogenase; KEGG: cps:CPS_0239 putative tryptophan halogenase
YP_001762192.1	PFAM: SapC family protein; KEGG: cps:CPS_0240 hypothetical protein
YP_001762193.1	KEGG: cps:CPS_0241 hypothetical protein
YP_001762194.1	TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pha:PSHAa1768 sodium/hexose cotransport protein
YP_001762197.1	KEGG: nve:NEMVE_v1g148832 hypothetical protein Pfam: Drf_FH1
YP_001762198.1	PFAM: regulatory protein TetR; KEGG: pat:Patl_4127 transcriptional regulator, TetR family
YP_001762199.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vha:VIBHAR_07016 oxidoreductase
YP_001762200.1	PFAM: ThiJ/PfpI domain protein; KEGG: ppu:PP_2491 ThiJ/PfpI family protein
YP_001762201.1	PFAM: OsmC family protein; KEGG: vha:VIBHAR_07015 hypothetical protein
YP_001762202.1	KEGG: pvi:Cvib_0160 periplasmic protein
YP_001762203.1	KEGG: dps:DP0589 hypothetical protein
YP_001762204.1	TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: pvi:Cvib_0158 membrane lipoprotein lipid attachment site
YP_001762205.1	KEGG: dps:DP0586 hypothetical protein
YP_001762206.1	KEGG: sdn:Sden_3426 hypothetical protein
YP_001762207.1	PFAM: FAD linked oxidase domain protein; KEGG: sdn:Sden_3156 FAD linked oxidase-like protein
YP_001762209.1	KEGG: ter:Tery_4957 hypothetical protein
YP_001762210.1	KEGG: sfr:Sfri_3645 putative lipoprotein
YP_001762211.1	PFAM: Endoribonuclease L-PSP; KEGG: slo:Shew_0101 endoribonuclease L-PSP
YP_001762212.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_001762213.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1107 GCN5-related N-acetyltransferase
YP_001762214.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_3927 acetyltransferase
YP_001762215.1	KEGG: slo:Shew_3172 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III
YP_001762216.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_3929 succinic semialdehyde dehydrogenase
YP_001762217.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_3930 transcriptional regulator, LysR family
YP_001762218.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_3931 transporter, LysE family
YP_001762219.1	KEGG: sbl:Sbal_0917 hypothetical protein
YP_001762220.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: vpa:VP2167 hypothetical protein
YP_001762221.1	KEGG: vfi:VF1213 hypothetical protein
YP_001762223.1	KEGG: sse:Ssed_3933 hypothetical protein
YP_001762224.1	PFAM: Na+/H+ antiporter NhaC; KEGG: sse:Ssed_3934 Na+/H+ antiporter NhaC
YP_001762225.1	KEGG: sse:Ssed_3935 hypothetical protein
YP_001762226.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sse:Ssed_3936 pseudouridine synthase
YP_001762228.1	KEGG: spc:Sputcn32_2190 hypothetical protein
YP_001762229.1	KEGG: amr:AM1_G0073 hypothetical protein
YP_001762230.1	KEGG: sse:Ssed_3937 hypothetical protein
YP_001762231.1	PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sse:Ssed_3938 aromatic amino acid permease
YP_001762232.1	GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells
YP_001762233.1	PFAM: protein of unknown function UPF0016; KEGG: sse:Ssed_3939 hypothetical protein
YP_001762234.1	PFAM: Catalase domain protein; KEGG: neu:NE1886 catalase
YP_001762235.1	KEGG: spl:Spea_0637 conserved hypothetical protein
YP_001762236.1	PFAM: thioesterase superfamily protein; KEGG: spl:Spea_0636 thioesterase superfamily protein
YP_001762237.1	TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: spl:Spea_0635 purine nucleoside phosphorylase
YP_001762238.1	PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: spl:Spea_0634 Na+ dependent nucleoside transporter domain protein
YP_001762239.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sse:Ssed_3944 endonuclease/exonuclease/phosphatase
YP_001762240.1	PFAM: regulatory protein LuxR; KEGG: sse:Ssed_3945 transcriptional regulator, LuxR family
YP_001762241.1	KEGG: sse:Ssed_3946 hypothetical protein
YP_001762242.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_001762243.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: sse:Ssed_3948 glycine cleavage T protein (aminomethyl transferase)
YP_001762244.1	PFAM: peptidase S41; WD40 domain protein beta Propeller; KEGG: sus:Acid_3719 peptidase S41
YP_001762245.1	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: spe:Spro_0514 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
YP_001762246.1	PFAM: zinc finger DksA/TraR C4-type; KEGG: sse:Ssed_3949 DnaK suppressor protein, putative
YP_001762248.1	KEGG: slo:Shew_3286 hypothetical protein
YP_001762249.1	KEGG: bur:Bcep18194_A5513 hypothetical protein
YP_001762252.1	KEGG: sde:Sde_3050 hypothetical protein
YP_001762253.1	PFAM: histone deacetylase superfamily; KEGG: vvy:VV1156 histone deacetylase/AcuC/AphA family protein
YP_001762254.1	SMART: low molecular weight phosphotyrosine protein phosphatase; KEGG: hch:HCH_00421 predicted protein tyrosine phosphatase
YP_001762255.1	TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; KEGG: pfl:PFL_2086 peptide chain release factor-like protein
YP_001762256.1	TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; KEGG: pen:PSEEN0410 hypothetical protein
YP_001762257.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: cps:CPS_1343 di-haem cytochrome c peroxidase
YP_001762258.1	TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: cps:CPS_1344 catalase/peroxidase HPI
YP_001762259.1	PFAM: globin; KEGG: pin:Ping_3074 globin
YP_001762260.1	PFAM: FAD dependent oxidoreductase; KEGG: cps:CPS_0260 hypothetical protein
YP_001762261.1	PFAM: protein of unknown function DUF81; KEGG: ppr:PBPRA2195 hypothetical protein
YP_001762262.1	PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: spl:Spea_3239 endothelin-converting enzyme 1
YP_001762263.1	KEGG: sse:Ssed_0288 hypothetical protein
YP_001762264.1	KEGG: spl:Spea_2760 conserved hypothetical protein
YP_001762265.1	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; KEGG: spl:Spea_3574 flavocytochrome c
YP_001762266.1	PFAM: phenylalanine/histidine ammonia-lyase; KEGG: spl:Spea_3575 phenylalanine/histidine ammonia-lyase
YP_001762267.1	YghU; B2989; one of eight putative glutathione transferase proteins from E. coli
YP_001762268.1	PFAM: PKD domain containing protein; Na-Ca exchanger/integrin-beta4; KEGG: slo:Shew_2170 endonuclease/exonuclease/phosphatase
YP_001762269.1	PFAM: protein of unknown function DUF985; KEGG: spl:Spea_3241 protein of unknown function DUF985
YP_001762270.1	KEGG: spl:Spea_3242 conserved hypothetical protein
YP_001762271.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3414 TonB-dependent receptor
YP_001762272.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_0795 integral membrane sensor signal transduction histidine kinase
YP_001762273.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pat:Patl_3411 two component transcriptional regulator, winged helix family
YP_001762278.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rde:RD1_4233 formate dehydrogenase, beta subunit
YP_001762279.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rde:RD1_4234 formate dehydrogenase, alpha subunit
YP_001762280.1	KEGG: sse:Ssed_3651 hypothetical protein
YP_001762281.1	PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: spl:Spea_3253 protein of unknown function DUF181
YP_001762282.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: vfi:VF1471 hypothetical protein
YP_001762283.1	KEGG: pha:PSHAb0310 hypothetical protein
YP_001762284.1	KEGG: sse:Ssed_1726 hypothetical protein
YP_001762285.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB0169 hypothetical protein
YP_001762286.1	KEGG: spl:Spea_3256 conserved hypothetical protein
YP_001762287.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppr:PBPRA2833 putative threonine efflux protein
YP_001762288.1	PFAM: tryptophan halogenase; KEGG: sde:Sde_1096 tryptophan halogenase, putative
YP_001762289.1	PFAM: tryptophan halogenase; KEGG: ccr:CC_0972 tryptophan halogenase, putative
YP_001762290.1	PFAM: tryptophan halogenase; KEGG: ccr:CC_0971 tryptophan halogenase, putative
YP_001762291.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_0970 TonB-dependent receptor
YP_001762292.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pdi:BDI_2661 gluconolactonase precursor
YP_001762293.1	PFAM: Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: spe:Spro_0536 beta-N-acetylhexosaminidase
YP_001762294.1	KEGG: sse:Ssed_3746 (protein-PII) uridylyltransferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase HD region
YP_001762296.1	KEGG: sdn:Sden_0849 hypothetical protein
YP_001762297.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: spl:Spea_3277 CMP/dCMP deaminase zinc-binding
YP_001762298.1	KEGG: sse:Ssed_3672 hypothetical protein
YP_001762299.1	KEGG: spl:Spea_3278 hypothetical protein
YP_001762300.1	PFAM: cation antiporter; KEGG: sse:Ssed_3661 cation antiporter
YP_001762301.1	PFAM: multiple resistance and pH regulation protein F; KEGG: spl:Spea_3280 multiple resistance and pH regulation protein F
YP_001762302.1	TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: sse:Ssed_3663 multisubunit Na+/H+ antiporter MnhG subunit-like protein
YP_001762303.1	subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_001762304.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: spl:Spea_3283 NADH-ubiquinone oxidoreductase chain 4L
YP_001762305.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_001762306.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sse:Ssed_3667 NADH dehydrogenase (quinone)
YP_001762307.1	KEGG: spl:Spea_3286 hypothetical protein
YP_001762308.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport
YP_001762309.1	PFAM: Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: dar:Daro_2143 conserved hypothetical hydrolase/lipase
YP_001762310.1	KEGG: she:Shewmr4_0632 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001762311.1	KEGG: cps:CPS_1818 hypothetical protein
YP_001762312.1	KEGG: ecc:c1886 hypothetical protein
YP_001762313.1	KEGG: vco:VC0395_A0335 hypothetical protein
YP_001762314.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sdn:Sden_0234 response regulator receiver
YP_001762315.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: abo:ABO_0626 phosphotransferase
YP_001762318.1	PFAM: phospholipase/Carboxylesterase; KEGG: syn:slr0168 hypothetical protein
YP_001762319.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_001762320.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_001762321.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_001762322.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sse:Ssed_3676 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_001762324.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase FAD-binding; KEGG: sse:Ssed_3677 2-polyprenyl-6-methoxyphenol 4-hydroxylase
YP_001762325.1	TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: sse:Ssed_3678 YecA family protein
YP_001762326.1	PFAM: protein of unknown function DUF710; KEGG: sse:Ssed_3679 protein of unknown function DUF710
YP_001762327.1	PFAM: MltA-interacting MipA family protein; KEGG: sbl:Sbal_0752 MltA-interacting MipA family protein
YP_001762328.1	KEGG: sbn:Sbal195_3688 hypothetical protein
YP_001762329.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: spc:Sputcn32_0845 integral membrane sensor signal transduction histidine kinase
YP_001762330.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbn:Sbal195_3690 two component transcriptional regulator, winged helix family
YP_001762331.1	KEGG: shw:Sputw3181_3331 hypothetical protein
YP_001762332.1	PFAM: MltA-interacting MipA family protein; KEGG: sbm:Shew185_3571 MltA-interacting MipA family protein
YP_001762333.1	KEGG: hch:HCH_03223 hypothetical protein
YP_001762334.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: pfl:PFL_5720 RNA polymerase sigma-70 factor, ECF subfamily, putative
YP_001762335.1	PFAM: YceI family protein; KEGG: mfa:Mfla_1355 YceI
YP_001762336.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: spl:Spea_3311 5-formyltetrahydrofolate cyclo-ligase
YP_001762337.1	KEGG: sbm:Shew185_3168 hypothetical protein
YP_001762338.1	PFAM: copper resistance lipoprotein NlpE; KEGG: sse:Ssed_3687 lipoprotein
YP_001762339.1	PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_001762340.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_001762341.1	KEGG: sse:Ssed_3689 pilin, putative
YP_001762342.1	KEGG: spl:Spea_3317 conserved hypothetical protein
YP_001762343.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: spl:Spea_3318 lysine exporter protein (LysE/YggA)
YP_001762344.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pha:PSHAb0299 putative TonB-dependent outer membrane receptor
YP_001762345.1	KEGG: sse:Ssed_3693 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase
YP_001762346.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: sse:Ssed_3694 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001762347.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_3695 AMP-dependent synthetase and ligase
YP_001762348.1	KEGG: spl:Spea_3468 conserved hypothetical protein
YP_001762349.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sdn:Sden_0610 helix-turn-helix, AraC type
YP_001762350.1	PFAM: protein of unknown function DUF81; KEGG: pin:Ping_3677 hypothetical protein DUF81
YP_001762351.1	KEGG: eba:ebA1714 hypothetical protein
YP_001762352.1	KEGG: sse:Ssed_3698 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_001762353.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: spl:Spea_3325 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_001762354.1	PFAM: protein of unknown function DUF1008; KEGG: spl:Spea_3326 protein of unknown function DUF1008
YP_001762355.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spl:Spea_3327 TonB-dependent heme/hemoglobin receptor family protein
YP_001762356.1	TIGRFAM: TonB family protein; KEGG: spl:Spea_3328 TonB family protein
YP_001762357.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: spl:Spea_3329 MotA/TolQ/ExbB proton channel
YP_001762358.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: spl:Spea_3330 biopolymer transport protein ExbD/TolR
YP_001762359.1	PFAM: periplasmic binding protein; KEGG: spl:Spea_3331 periplasmic binding protein
YP_001762360.1	PFAM: transport system permease protein; KEGG: spl:Spea_3332 transport system permease protein
YP_001762361.1	with HmuTU is involved in the transport of hemin
YP_001762362.1	KEGG: shn:Shewana3_2175 phage integrase family protein
YP_001762363.1	KEGG: shn:Shewana3_2176 hypothetical protein
YP_001762364.1	KEGG: shn:Shewana3_2177 hypothetical protein
YP_001762365.1	KEGG: shn:Shewana3_2178 hypothetical protein
YP_001762366.1	KEGG: ppr:PBPRA0857 hypothetical protein
YP_001762367.1	PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: sfr:Sfri_3418 type III restriction enzyme, res subunit
YP_001762368.1	KEGG: sfr:Sfri_3419 hypothetical protein
YP_001762369.1	PFAM: helix-turn-helix domain protein; KEGG: sfr:Sfri_3420 transcriptional regulator, XRE family protein
YP_001762371.1	PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_1822 hypothetical protein
YP_001762372.1	KEGG: sfr:Sfri_1848 hypothetical protein
YP_001762373.1	KEGG: sfr:Sfri_1847 hypothetical protein
YP_001762374.1	KEGG: sse:Ssed_3699 hypothetical protein
YP_001762375.1	PFAM: Ion transport protein; KEGG: sse:Ssed_3700 putative cation transporter component
YP_001762376.1	KEGG: sse:Ssed_3701 hypothetical protein
YP_001762377.1	KEGG: gka:GK2897 hydantoin racemase
YP_001762378.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: reu:Reut_B5473 5-oxoprolinase (ATP-hydrolyzing)
YP_001762379.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: reu:Reut_B5474 5-oxoprolinase (ATP-hydrolyzing)
YP_001762380.1	KEGG: bja:bll5495 hypothetical protein
YP_001762381.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1722 TonB-dependent receptor
YP_001762382.1	PFAM: regulatory protein LuxR; KEGG: xac:XAC3421 transcriptional regulator
YP_001762383.1	PFAM: membrane-flanked domain; KEGG: sse:Ssed_3702 membrane-flanked domain protein
YP_001762384.1	PFAM: membrane-flanked domain; KEGG: sse:Ssed_3703 membrane-flanked domain protein
YP_001762385.1	PFAM: protein of unknown function DUF924; KEGG: sse:Ssed_3704 protein of unknown function DUF924
YP_001762387.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cps:CPS_1462 hypothetical protein
YP_001762388.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pat:Patl_0154 AMP-dependent synthetase and ligase
YP_001762389.1	PFAM: Amidase; KEGG: vei:Veis_0353 amidase
YP_001762390.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_4358 TonB-dependent receptor
YP_001762391.1	KEGG: mva:Mvan_0652 regulatory protein
YP_001762392.1	PFAM: regulatory protein MarR; KEGG: bra:BRADO0598 putative transcriptional regulatory protein, MarR family
YP_001762393.1	KEGG: sde:Sde_0624 hypothetical protein
YP_001762394.1	KEGG: sde:Sde_0625 hypothetical protein
YP_001762395.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_001762396.1	KEGG: sde:Sde_0627 diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s)
YP_001762397.1	PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: gur:Gura_1217 transcription activator, effector binding
YP_001762398.1	PFAM: protein of unknown function DUF1330; KEGG: mlo:mll1854 hypothetical protein
YP_001762399.1	PFAM: helix-turn-helix HxlR type; KEGG: mlo:mlr1855 hypothetical protein
YP_001762400.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: sfr:Sfri_3873 carboxymuconolactone decarboxylase
YP_001762401.1	PFAM: regulatory protein MerR; KEGG: sfr:Sfri_3872 transcriptional regulator, MerR family protein
YP_001762403.1	PFAM: AIG2 family protein; KEGG: cps:CPS_2442 hypothetical protein
YP_001762404.1	KEGG: mmw:Mmwyl1_1485 putative transcriptional regulator, Fis family protein
YP_001762405.1	KEGG: shw:Sputw3181_2554 hypothetical protein
YP_001762406.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sse:Ssed_3644 putative NADH-dependent flavin oxidoreductase
YP_001762407.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_3643 transcriptional regulator, TetR family
YP_001762408.1	PFAM: protein of unknown function UPF0153; KEGG: ppr:PBPRA2316 hypothetical protein
YP_001762409.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_3712 transcriptional regulator
YP_001762410.1	PFAM: UspA domain protein; KEGG: sse:Ssed_3713 UspA domain protein
YP_001762411.1	PFAM: UspA domain protein; KEGG: sse:Ssed_3714 universal stress protein family
YP_001762412.1	KEGG: sbn:Sbal195_3516 putative lipoprotein
YP_001762413.1	PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: sfr:Sfri_0904 protein of unknown function DUF692
YP_001762414.1	KEGG: sbn:Sbal195_3518 hypothetical protein
YP_001762415.1	PFAM: Aldehyde Dehydrogenase; KEGG: sse:Ssed_3716 coniferyl aldehyde dehydrogenase
YP_001762416.1	PFAM: regulatory protein TetR; KEGG: sse:Ssed_3717 transcriptional regulator, TetR family
YP_001762419.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_3718 integral membrane sensor signal transduction histidine kinase
YP_001762420.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sse:Ssed_3719 two component, sigma54 specific, transcriptional regulator, fis family
YP_001762421.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_3720 protein of unknown function DUF214
YP_001762422.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_3721 protein of unknown function DUF214
YP_001762423.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3722 ABC transporter related
YP_001762424.1	KEGG: sse:Ssed_3723 hypothetical protein
YP_001762425.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sse:Ssed_3724 efflux transporter, RND family, MFP subunit
YP_001762426.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sse:Ssed_3725 protein of unknown function DUF395, YeeE/YedE
YP_001762427.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sse:Ssed_3726 protein of unknown function DUF395, YeeE/YedE
YP_001762428.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: sse:Ssed_3727 NADH dehydrogenase
YP_001762429.1	KEGG: sse:Ssed_3728 hypothetical protein
YP_001762430.1	PFAM: periplasmic binding protein; KEGG: spl:Spea_3374 periplasmic binding protein
YP_001762431.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_001762432.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_001762433.1	PFAM: cobalbumin biosynthesis protein; KEGG: sse:Ssed_3732 cobalbumin biosynthesis enzyme
YP_001762434.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: slo:Shew_0715 cobalamin 5'-phosphate synthase
YP_001762435.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_001762436.1	PFAM: transport system permease protein; KEGG: sse:Ssed_3735 transport system permease protein
YP_001762437.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3736 ABC transporter-related protein
YP_001762438.1	PFAM: Phosphoglycerate mutase; KEGG: sse:Ssed_3737 phosphoglycerate mutase
YP_001762439.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_001762442.1	KEGG: vha:VIBHAR_01747 hypothetical protein
YP_001762443.1	TIGRFAM: YD repeat protein; KEGG: ang:An14g06150 hypothetical protein Pfam: RHS_repeat UPF0126 PE D-aminoacyl_C PROSITE: THR_RICH
YP_001762448.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: she:Shewmr4_2799 protein of unknown function DUF405
YP_001762449.1	PFAM: TM2 domain containing protein?; KEGG: spl:Spea_3393 TM2 domain containing protein?
YP_001762450.1	PFAM: glutaredoxin; KEGG: hch:HCH_04220 glutaredoxin and related protein
YP_001762451.1	KEGG: slo:Shew_0704 hypothetical protein
YP_001762452.1	KEGG: sbn:Sbal195_4665 hypothetical protein
YP_001762453.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: mmw:Mmwyl1_1774 protein of unknown function DUF6 transmembrane
YP_001762454.1	PFAM: OsmC family protein; KEGG: pha:PSHAa1933 hypothetical protein
YP_001762455.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: vfi:VF1121 BCCT family transporter
YP_001762456.1	PFAM: BLUF domain protein; KEGG: pcr:Pcryo_1625 hypothetical protein
YP_001762457.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3953 ABC transporter-related protein
YP_001762458.1	PFAM: protein of unknown function DUF214; KEGG: sse:Ssed_3954 protein of unknown function DUF214
YP_001762459.1	KEGG: spl:Spea_0625 conserved hypothetical protein
YP_001762460.1	PFAM: NapD family protein; KEGG: sse:Ssed_3956 NapD family protein
YP_001762461.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_001762462.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: spl:Spea_0620 nitrate reductase cytochrome c-type subunit (NapB)
YP_001762463.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: hne:HNE_2503 hydantoinase/oxoprolinase family protein
YP_001762464.1	PFAM: protein of unknown function DUF917; KEGG: hne:HNE_2504 hypothetical protein
YP_001762465.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pat:Patl_3466 TonB-dependent receptor
YP_001762466.1	PFAM: regulatory protein LuxR; KEGG: hne:HNE_2502 transcriptional regulator, LuxR family
YP_001762467.1	KEGG: spl:Spea_0617 hypothetical protein
YP_001762468.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: spl:Spea_0616 transcriptional regulator, AraC family
YP_001762469.1	KEGG: sse:Ssed_3965 hypothetical protein
YP_001762470.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: saz:Sama_0583 diguanylate cyclase
YP_001762471.1	KEGG: pat:Patl_0483 hypothetical protein
YP_001762472.1	KEGG: saz:Sama_0581 hypothetical protein
YP_001762473.1	TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; protein of unknown function DUF785; RimK domain protein ATP-grasp; KEGG: sse:Ssed_3966 alpha-L-glutamate ligase, RimK family
YP_001762474.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sse:Ssed_3967 carbamoyl-phosphate synthase L chain, ATP-binding
YP_001762475.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_3968 transcriptional regulator, LysR family
YP_001762476.1	KEGG: sdn:Sden_2964 hypothetical protein
YP_001762477.1	KEGG: sdn:Sden_2966 hypothetical protein
YP_001762478.1	PFAM: peptidase C39 bacteriocin processing; KEGG: sdn:Sden_2967 peptidase C39, bacteriocin processing
YP_001762479.1	KEGG: sdn:Sden_2968 hypothetical protein
YP_001762480.1	KEGG: sdn:Sden_2969 hypothetical protein
YP_001762481.1	PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sdn:Sden_2970 sigma-54 factor, interaction region
YP_001762482.1	KEGG: sse:Ssed_3969 hypothetical protein
YP_001762483.1	PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: sse:Ssed_3970 protein of unknown function DUF335, SprT
YP_001762484.1	PFAM: Endonuclease I; KEGG: sse:Ssed_3971 deoxyribonuclease I
YP_001762485.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_001762486.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_001762487.1	PFAM: Alkaline phosphatase; KEGG: sse:Ssed_3974 alkaline phosphatase
YP_001762488.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sse:Ssed_3975 diguanylate cyclase/phosphodiesterase
YP_001762489.1	KEGG: sse:Ssed_3976 hypothetical protein
YP_001762490.1	KEGG: sse:Ssed_3977 hypothetical protein
YP_001762491.1	PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; Methyltransferase small domain protein; KEGG: sse:Ssed_3978 rRNA (guanine-N(2)-)-methyltransferase
YP_001762492.1	PFAM: protein of unknown function DUF342; KEGG: sse:Ssed_3979 protein of unknown function DUF342
YP_001762493.1	PFAM: peptidase M50; KEGG: sse:Ssed_3980 peptidase M50
YP_001762494.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: vvu:VV1_2876 membrane-fusion protein
YP_001762495.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: vfi:VF1183 acriflavin resistance periplasmic protein
YP_001762496.1	PFAM: acriflavin resistance protein; KEGG: vvy:VV1397 transporter, AcrB/D/F family
YP_001762497.1	KEGG: slo:Shew_3247 hypothetical protein
YP_001762498.1	KEGG: sse:Ssed_4004 hypothetical protein
YP_001762499.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sse:Ssed_4005 integral membrane sensor signal transduction histidine kinase
YP_001762500.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_001762501.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sse:Ssed_4007 UBA/ThiF-type NAD/FAD binding protein
YP_001762502.1	PFAM: porin Gram-negative type; KEGG: spl:Spea_0589 porin gram-negative type
YP_001762503.1	PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type
YP_001762504.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
YP_001762505.1	KEGG: sse:Ssed_4011 hypothetical protein
YP_001762506.1	SMART: serine/threonine protein kinase; KEGG: sse:Ssed_4012 serine/threonine protein kinase
YP_001762507.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: sse:Ssed_4013 FxsA cytoplasmic membrane protein
YP_001762508.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: sse:Ssed_4014 CutA1 divalent ion tolerance protein
YP_001762509.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm
YP_001762510.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: spl:Spea_3518 peptidase S9 prolyl oligopeptidase active site domain protein
YP_001762511.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: son:SO_0613 para-aminobenzoate synthase glutamine amidotransferase, component II
YP_001762512.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: saz:Sama_3016 GGDEF domain-like protein
YP_001762513.1	PFAM: Stringent starvation protein B; KEGG: sse:Ssed_0805 stringent starvation protein B
YP_001762514.1	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
YP_001762515.1	PFAM: cytochrome c1; KEGG: sse:Ssed_0803 cytochrome c1
YP_001762516.1	PFAM: Cytochrome b/b6 domain; KEGG: slo:Shew_0571 cytochrome b/b6, N-terminal domain
YP_001762517.1	KEGG: sse:Ssed_0801 ubiquinol--cytochrome-c reductase; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_001762518.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: sse:Ssed_0800 HflC protein
YP_001762519.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sse:Ssed_0799 HflK protein
YP_001762520.1	TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: sse:Ssed_0798 GTP-binding protein, HSR1-related
YP_001762521.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: sse:Ssed_0797 RNA chaperone Hfq
YP_001762522.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_001762523.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_001762524.1	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: sse:Ssed_0794 N-acetylmuramoyl-L-alanine amidase
YP_001762525.1	PFAM: protein of unknown function UPF0079; KEGG: sse:Ssed_0793 protein of unknown function UPF0079
YP_001762526.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: sse:Ssed_0792 carbohydrate kinase, YjeF-related protein
YP_001762528.1	KEGG: sse:Ssed_0791 hypothetical protein
YP_001762529.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_001762530.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_001762531.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_001762532.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: sse:Ssed_0787 protein of unknown function DUF6, transmembrane
YP_001762533.1	PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0786 MscS mechanosensitive ion channel
YP_001762534.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sse:Ssed_0785 glycerophosphoryl diester phosphodiesterase
YP_001762535.1	KEGG: sse:Ssed_0784 hypothetical protein
YP_001762536.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sse:Ssed_0783 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_001762537.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: sbn:Sbal195_3908 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor
YP_001762538.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: spl:Spea_3555 BFD domain protein (2Fe-2S)-binding domain protein
YP_001762539.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001762540.1	KEGG: sse:Ssed_0780 L-sorbosone dehydrogenase, putative
YP_001762541.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_001762542.1	PFAM: protein of unknown function UPF0227; KEGG: sse:Ssed_0778 protein of unknown function UPF0227
YP_001762543.1	PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: sse:Ssed_0777 calcineurin phosphoesterase C-terminal domain protein
YP_001762544.1	PFAM: protein of unknown function DUF1249; KEGG: sse:Ssed_0776 protein of unknown function DUF1249
YP_001762545.1	PFAM: NUDIX hydrolase; KEGG: sse:Ssed_0775 ADP-ribose diphosphatase
YP_001762546.1	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
YP_001762547.1	KEGG: sse:Ssed_0773 hypothetical protein
YP_001762548.1	KEGG: sse:Ssed_0772 hypothetical protein
YP_001762549.1	PFAM: protein of unknown function DUF461; KEGG: sse:Ssed_0771 protein of unknown function DUF461
YP_001762550.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sse:Ssed_0770 enoyl-CoA hydratase/isomerase
YP_001762551.1	KEGG: sse:Ssed_0769 hypothetical protein
YP_001762552.1	PFAM: PspC domain protein; KEGG: sse:Ssed_0768 phage shock protein C, PspC
YP_001762553.1	KEGG: sse:Ssed_0767 hypothetical protein
YP_001762554.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: sse:Ssed_0766 TIM-barrel protein, YjbN family
YP_001762555.1	PFAM: CheC domain protein; KEGG: sse:Ssed_0765 putative chemotaxis protein CheX
YP_001762556.1	KEGG: sse:Ssed_0764 hypothetical protein
YP_001762557.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_001762558.1	KEGG: sse:Ssed_0762 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase
YP_001762559.1	KEGG: sse:Ssed_0761 hypothetical protein
YP_001762560.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_001762561.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_001762562.1	binds single-stranded DNA at the primosome assembly site
YP_001762563.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_001762564.1	PFAM: protein of unknown function DUF481; KEGG: sse:Ssed_0756 protein of unknown function DUF481
YP_001762565.1	KEGG: hch:HCH_00067 hypothetical protein
YP_001762567.1	Specifically methylates the ribose of guanosine 2251 in 23S rRNA
YP_001762568.1	KEGG: sse:Ssed_0752 exoribonuclease II; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein
YP_001762569.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: sse:Ssed_0751 Sel1 domain protein repeat-containing protein
YP_001762570.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_001762571.1	KEGG: spl:Spea_3593 conserved hypothetical protein
YP_001762572.1	forms a direct contact with the tRNA during translation
YP_001762573.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_001762574.1	PFAM: AFG1-family ATPase; KEGG: sse:Ssed_0746 AFG1-family ATPase
YP_001762575.1	KEGG: sse:Ssed_0745 hypothetical protein
YP_001762576.1	KEGG: sse:Ssed_0744 2-alkenal reductase; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_001762577.1	TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sse:Ssed_0743 2-alkenal reductase
YP_001762578.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_001762579.1	PFAM: BolA family protein; KEGG: sse:Ssed_0738 BolA family protein
YP_001762580.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sse:Ssed_0737 SpoIIAA family protein
YP_001762581.1	PFAM: toluene tolerance family protein; KEGG: sse:Ssed_0736 toluene tolerance family protein
YP_001762582.1	PFAM: Mammalian cell entry related domain protein; KEGG: sse:Ssed_0735 mammalian cell entry related domain protein
YP_001762583.1	PFAM: protein of unknown function DUF140; KEGG: sse:Ssed_0734 protein of unknown function DUF140
YP_001762584.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0733 ABC transporter-related protein
YP_001762585.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: sse:Ssed_0732 Na+/Ca+ antiporter, CaCA family
YP_001762586.1	KEGG: sse:Ssed_0731 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_001762587.1	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis
YP_001762588.1	PFAM: protein of unknown function DUF1239; KEGG: sse:Ssed_0729 protein of unknown function DUF1239
YP_001762589.1	TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: sse:Ssed_0728 OstA family protein
YP_001762590.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0727 ABC transporter-related protein
YP_001762591.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_001762592.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sse:Ssed_0725 sigma 54 modulation protein/ribosomal protein S30EA
YP_001762593.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sse:Ssed_0724 PTS IIA-like nitrogen-regulatory protein PtsN
YP_001762594.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_0723 uncharacterized P-loop ATPase protein UPF0042
YP_001762595.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sse:Ssed_0722 phosphocarrier protein NPR
YP_001762596.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sse:Ssed_0721 magnesium transporter
YP_001762598.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: spl:Spea_3623 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_001762599.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sse:Ssed_0716 OmpA/MotB domain protein
YP_001762600.1	PFAM: GtrA family protein; KEGG: sse:Ssed_0715 hypothetical protein
YP_001762601.1	PFAM: glycosyl transferase family 39; KEGG: sse:Ssed_0714 hypothetical protein
YP_001762602.1	PFAM: glycosyl transferase family 2; KEGG: sse:Ssed_0713 conserved hypothetical glycosyl transferase
YP_001762603.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_0712 two component transcriptional regulator, winged helix family
YP_001762604.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_0711 integral membrane sensor signal transduction histidine kinase
YP_001762605.1	KEGG: sse:Ssed_3588 decaheme cytochrome c
YP_001762606.1	KEGG: sse:Ssed_0707 putative FG-GAP repeat lipoprotein
YP_001762607.1	PFAM: protein of unknown function DUF752; KEGG: slo:Shew_3321 protein of unknown function DUF752
YP_001762608.1	PFAM: protein of unknown function DUF885; KEGG: sdn:Sden_1492 protein of unknown function DUF885
YP_001762609.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: spl:Spea_1861 RarD protein, DMT superfamily transporter
YP_001762610.1	PFAM: PGAP1 family protein; KEGG: sse:Ssed_0705 lipase-like protein
YP_001762611.1	KEGG: sse:Ssed_0704 hypothetical protein
YP_001762612.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ilo:IL1172 secreted dipeptidyl aminopeptidase
YP_001762614.1	PFAM: protein of unknown function DUF1287; KEGG: hch:HCH_06899 hypothetical protein
YP_001762615.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_001762616.1	KEGG: hch:HCH_00017 hypothetical protein
YP_001762617.1	KEGG: saz:Sama_0310 hypothetical protein
YP_001762618.1	PFAM: beta-lactamase domain protein; KEGG: sse:Ssed_0702 beta-lactamase-like protein
YP_001762619.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_0701 helix-turn-helix-domain containing protein, AraC type
YP_001762620.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sbm:Shew185_0737 GCN5-related N-acetyltransferase
YP_001762621.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0689 transport protein of the major facilitator
YP_001762622.1	KEGG: cps:CPS_2663 hypothetical protein
YP_001762623.1	KEGG: pat:Patl_3535 uncharacterized membrane-anchored protein-like
YP_001762624.1	KEGG: hch:HCH_03588 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001762625.1	KEGG: cps:CPS_0687 hypothetical protein
YP_001762626.1	KEGG: pat:Patl_1545 hypothetical protein
YP_001762627.1	KEGG: mmr:Mmar10_1176 protein of unknown function DUF1123
YP_001762628.1	KEGG: slo:Shew_3339 glutathione-dependent formaldehyde-activating, GFA
YP_001762629.1	KEGG: sbn:Sbal195_0647 hypothetical protein
YP_001762630.1	PFAM: aminotransferase class V; KEGG: spl:Spea_3648 aminotransferase class V
YP_001762631.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: spl:Spea_3649 diguanylate cyclase/phosphodiesterase
YP_001762632.1	SMART: extracellular solute-binding protein family 3; KEGG: spl:Spea_3650 extracellular solute-binding protein family 3
YP_001762633.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sse:Ssed_0680 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_001762635.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_3863 transcriptional regulator, LysR family
YP_001762637.1	KEGG: sse:Ssed_0659 hypothetical protein
YP_001762638.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: vfi:VF2173 sulfate transporter
YP_001762639.1	PFAM: monooxygenase FAD-binding; tryptophan halogenase; KEGG: ccr:CC_0555 hypothetical protein
YP_001762640.1	KEGG: ccr:CC_0556 hypothetical protein
YP_001762641.1	KEGG: ccr:CC_0557 hypothetical protein
YP_001762645.1	PFAM: Cold-shock protein DNA-binding; Excalibur domain protein; SMART: Cold shock protein; KEGG: sse:Ssed_0647 cold-shock DNA-binding domain protein
YP_001762647.1	KEGG: shm:Shewmr7_0124 hypothetical protein
YP_001762649.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO_1890 hypothetical protein
YP_001762650.1	KEGG: rfr:Rfer_0177 hypothetical protein
YP_001762651.1	KEGG: jan:Jann_2011 hypothetical protein
YP_001762652.1	KEGG: cvi:CV_3928 hypothetical protein
YP_001762654.1	KEGG: spl:Spea_2273 hypothetical protein
YP_001762655.1	KEGG: sbm:Shew185_1692 hypothetical protein
YP_001762656.1	TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: sbm:Shew185_3360 integron integrase
YP_001762657.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_001762658.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_001762659.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sse:Ssed_0640 MATE efflux family protein
YP_001762660.1	PFAM: polysaccharide deacetylase; KEGG: btl:BALH_1738 polysaccharide deacetylase
YP_001762661.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0631 carbonate dehydratase
YP_001762662.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_0630 efflux transporter, RND family, MFP subunit
YP_001762663.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_0629 acriflavin resistance protein
YP_001762664.1	KEGG: sse:Ssed_0636 hypothetical protein
YP_001762665.1	KEGG: sse:Ssed_0635 hypothetical protein
YP_001762666.1	KEGG: sse:Ssed_0634 hypothetical protein
YP_001762667.1	KEGG: sse:Ssed_0633 hypothetical protein
YP_001762668.1	PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sse:Ssed_0632 DNA-binding protein
YP_001762669.1	KEGG: sse:Ssed_0628 hypothetical protein
YP_001762670.1	KEGG: sse:Ssed_0627 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001762671.1	PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: sse:Ssed_0626 PhoH family protein
YP_001762672.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA
YP_001762673.1	KEGG: sse:Ssed_0624 hypothetical protein
YP_001762674.1	PFAM: conserved hypothetical protein; KEGG: slo:Shew_0455 uncharacterized protein UPF0114
YP_001762675.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_001762676.1	PFAM: response regulator receiver; KEGG: sse:Ssed_0622 response regulator receiver protein
YP_001762677.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_0621 diguanylate cyclase
YP_001762678.1	PFAM: protein of unknown function DUF1260; KEGG: sse:Ssed_0620 protein of unknown function DUF1260
YP_001762679.1	KEGG: sse:Ssed_0619 1-acylglycerol-3-phosphate O-acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase
YP_001762680.1	PFAM: ABC-3 protein; KEGG: sse:Ssed_0618 ABC-3 protein
YP_001762681.1	PFAM: periplasmic solute binding protein; KEGG: sse:Ssed_0617 periplasmic solute binding protein
YP_001762682.1	KEGG: sse:Ssed_0616 hypothetical protein
YP_001762683.1	KEGG: sse:Ssed_0615 hypothetical protein
YP_001762685.1	KEGG: sse:Ssed_0614 hypothetical protein
YP_001762686.1	PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0613 MscS mechanosensitive ion channel
YP_001762687.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
YP_001762688.1	PFAM: aldo/keto reductase; KEGG: sbl:Sbal_0519 aldo/keto reductase
YP_001762689.1	PFAM: MaoC domain protein dehydratase; KEGG: sse:Ssed_0611 MaoC domain protein dehydratase
YP_001762690.1	stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: sse:Ssed_0610 CheD
YP_001762691.1	PFAM: GumN family protein; KEGG: sse:Ssed_0609 GumN family protein
YP_001762692.1	KEGG: sse:Ssed_0608 hypothetical protein
YP_001762693.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: she:Shewmr4_0555 diguanylate cyclase/phosphodiesterase
YP_001762694.1	KEGG: sse:Ssed_0607 hypothetical protein
YP_001762695.1	KEGG: sse:Ssed_0606 hypothetical protein
YP_001762697.1	KEGG: sse:Ssed_0604 hypothetical protein
YP_001762698.1	KEGG: sse:Ssed_0603 hypothetical protein
YP_001762699.1	KEGG: sse:Ssed_0602 hypothetical protein
YP_001762700.1	PFAM: response regulator receiver; KEGG: sse:Ssed_0601 response regulator receiver protein
YP_001762701.1	PFAM: histone family protein DNA-binding protein; KEGG: sse:Ssed_0600 histone family protein DNA-binding protein
YP_001762702.1	PFAM: conserved hypothetical protein; KEGG: slo:Shew_0429 hypothetical protein
YP_001762703.1	KEGG: sse:Ssed_0598 hypothetical protein
YP_001762704.1	KEGG: pca:Pcar_2459 hypothetical protein
YP_001762705.1	PFAM: carbohydrate kinase FGGY; KEGG: sse:Ssed_0596 sugar (pentulose and hexulose) kinase
YP_001762706.1	PFAM: FAD dependent oxidoreductase; KEGG: sse:Ssed_0595 FAD dependent oxidoreductase
YP_001762707.1	PFAM: FAD linked oxidase domain protein; KEGG: sse:Ssed_0594 FAD linked oxidase domain protein
YP_001762708.1	SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sse:Ssed_0593 putative transcriptional regulator
YP_001762709.1	PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_0587 hypothetical protein
YP_001762710.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_0586 ABC transporter-related protein
YP_001762711.1	PFAM: ABC-2 type transporter; KEGG: sse:Ssed_0585 ABC-2 type transporter
YP_001762712.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sse:Ssed_0584 amino acid carrier protein
YP_001762713.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: cps:CPS_3740 putative endoglucanase A
YP_001762714.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: cps:CPS_3739 periplasmic beta-glucosidase
YP_001762715.1	PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_3738 hypothetical protein
YP_001762716.1	KEGG: sdn:Sden_0133 hypothetical protein
YP_001762717.1	KEGG: hne:HNE_2525 hypothetical protein
YP_001762718.1	TIGRFAM: YD repeat protein; KEGG: hne:HNE_2526 putative wall-associated protein
YP_001762719.1	KEGG: sbn:Sbal195_4404 hypothetical protein
YP_001762721.1	PFAM: Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: pin:Ping_0555 carbohydrate-binding CenC domain protein
YP_001762722.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_1397 TonB-dependent receptor
YP_001762723.1	PFAM: glycoside hydrolase family 16; KEGG: saz:Sama_1396 glucan endo-1,3-beta-D-glucosidase
YP_001762724.1	PFAM: glycoside hydrolase family 16; KEGG: cps:CPS_3723 beta-glucanase
YP_001762725.1	KEGG: cps:CPS_3722 hypothetical protein
YP_001762726.1	PFAM: glycoside hydrolase family 17; KEGG: cps:CPS_3721 putative glycosyl hydrolase
YP_001762727.1	PFAM: glycoside hydrolase family 17; KEGG: cps:CPS_3720 putative glycosyl hydrolase
YP_001762728.1	PFAM: histidine kinase internal region; KEGG: cps:CPS_3719 sensor histidine kinase
YP_001762729.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cps:CPS_3718 response regulator
YP_001762731.1	PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0577 major facilitator superfamily MFS_1
YP_001762732.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
YP_001762733.1	TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: sse:Ssed_0575 arsenical-resistance protein
YP_001762734.1	PFAM: regulatory protein ArsR; KEGG: sse:Ssed_0574 transcriptional regulator, ArsR family
YP_001762735.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sse:Ssed_0572 peptidase U62, modulator of DNA gyrase
YP_001762736.1	PFAM: protein of unknown function DUF615; KEGG: sse:Ssed_0571 protein of unknown function DUF615
YP_001762737.1	PFAM: Ig domain protein group 1 domain protein; KEGG: spl:Spea_3742 Ig domain protein group 1 domain protein
YP_001762738.1	PFAM: ABC-2 type transporter; KEGG: shm:Shewmr7_0490 hypothetical protein
YP_001762739.1	PFAM: ABC-2 type transporter; KEGG: son:SO_4088 conserved hypothetical protein
YP_001762740.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO_4089 HlyD family secretion protein
YP_001762741.1	PFAM: outer membrane efflux protein; KEGG: shn:Shewana3_3640 outer membrane efflux protein
YP_001762742.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sse:Ssed_0565 peptidase U62, modulator of DNA gyrase
YP_001762743.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sse:Ssed_0564 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_001762744.1	KEGG: sse:Ssed_0563 hypothetical protein
YP_001762745.1	involved in the processing of the 5'end of 16S rRNA
YP_001762746.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sse:Ssed_0561 maf protein
YP_001762747.1	TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: sse:Ssed_0560 rod shape-determining protein MreD
YP_001762748.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_001762749.1	functions in MreBCD complex in some organisms
YP_001762750.1	KEGG: sdn:Sden_3335 hypothetical protein
YP_001762751.1	KEGG: sse:Ssed_0556 MSHA biogenesis protein MshP
YP_001762752.1	KEGG: slo:Shew_0400 methylation site containing protein
YP_001762753.1	KEGG: slo:Shew_0399 methylation site containing protein
YP_001762754.1	KEGG: sse:Ssed_0553 MSHA pilin protein MshC
YP_001762755.1	KEGG: spl:Spea_3761 MSHA pilin protein MshA
YP_001762756.1	KEGG: slo:Shew_0397 methylation site containing protein
YP_001762757.1	KEGG: slo:Shew_0396 methylation site containing protein
YP_001762758.1	KEGG: sfr:Sfri_3745 methylation site containing protein
YP_001762759.1	KEGG: sse:Ssed_0549 hypothetical protein
YP_001762760.1	PFAM: type II secretion system protein; KEGG: sse:Ssed_0548 type II secretion system protein
YP_001762761.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sse:Ssed_0547 type II secretion system protein E
YP_001762762.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_0546 tetratricopeptide TPR_2 repeat protein
YP_001762763.1	KEGG: sse:Ssed_0545 MSHA biogenesis protein MshM
YP_001762764.1	TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB short domain; KEGG: sse:Ssed_0544 pilus (MSHA type) biogenesis protein MshL
YP_001762765.1	KEGG: sse:Ssed_0543 MSHA biogenesis protein MshK
YP_001762766.1	KEGG: sse:Ssed_0542 MSHA biogenesis protein MshJ
YP_001762767.1	KEGG: sse:Ssed_0541 fimbrial assembly family protein
YP_001762768.1	KEGG: sse:Ssed_0540 conserved hypothetical biogenesis protein MshI
YP_001762769.1	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules
YP_001762770.1	PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: slo:Shew_0383 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))
YP_001762771.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_001762772.1	KEGG: sse:Ssed_0535 hypothetical protein
YP_001762773.1	KEGG: sse:Ssed_0534 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_001762774.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_001762775.1	PFAM: Sporulation domain protein; KEGG: sse:Ssed_0532 sporulation domain protein
YP_001762776.1	heat shock protein involved in degradation of misfolded proteins
YP_001762777.1	heat shock protein involved in degradation of misfolded proteins
YP_001762778.1	PFAM: protein of unknown function DUF971; KEGG: sse:Ssed_0528 protein of unknown function DUF971
YP_001762779.1	KEGG: sse:Ssed_0523 hypothetical protein
YP_001762780.1	KEGG: sfr:Sfri_3594 hypothetical protein
YP_001762781.1	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sse:Ssed_0511 putative tyrosine-specific transport protein
YP_001762782.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_0510 putative lipoprotein
YP_001762783.1	KEGG: sfr:Sfri_3100 hypothetical protein
YP_001762784.1	KEGG: spl:Spea_3292 hypothetical protein
YP_001762785.1	PFAM: regulatory protein GntR HTH; KEGG: syf:Synpcc7942_1725 regulatory protein GntR, HTH
YP_001762786.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0509 GCN5-related N-acetyltransferase
YP_001762787.1	PFAM: GCN5-related N-acetyltransferase; KEGG: btl:BALH_2694 ribosomal-protein-alanine acetyltransferase
YP_001762788.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: vvu:VV1_0186 methyl-accepting chemotaxis protein
YP_001762789.1	PFAM: response regulator receiver; CheW domain protein; KEGG: sbn:Sbal195_3332 response regulator receiver modulated CheW protein
YP_001762790.1	KEGG: sse:Ssed_0506 hypothetical protein
YP_001762791.1	TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: spl:Spea_0521 UbiD family decarboxylase
YP_001762792.1	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin
YP_001762793.1	PFAM: transcriptional regulator domain protein; KEGG: slo:Shew_0358 transcriptional regulator, CadC
YP_001762794.1	KEGG: sse:Ssed_0491 copper ABC transporter, permease protein
YP_001762795.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spl:Spea_0511 ABC transporter related
YP_001762796.1	SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: sse:Ssed_0500 periplasmic copper-binding
YP_001762797.1	PFAM: NosL family protein; KEGG: spl:Spea_0509 NosL family protein
YP_001762798.1	PFAM: Polysulphide reductase NrfD; KEGG: spl:Spea_0508 polysulphide reductase NrfD
YP_001762799.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spl:Spea_0507 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001762800.1	KEGG: sse:Ssed_0496 tetratricopeptide TPR_2 repeat protein
YP_001762801.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: spl:Spea_0505 peptidylprolyl isomerase FKBP-type
YP_001762802.1	SMART: Rhodanese domain protein; KEGG: spl:Spea_0504 rhodanese domain protein
YP_001762803.1	KEGG: spl:Spea_0503 cytochrome c, putative
YP_001762805.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_001762806.1	PFAM: Domain of unknown function DUF1852; KEGG: vpa:VP1992 hypothetical protein
YP_001762807.1	PFAM: protein of unknown function DUF81; KEGG: cps:CPS_1153 hypothetical protein
YP_001762808.1	KEGG: shw:Sputw3181_0742 hypothetical protein
YP_001762809.1	KEGG: yps:YPTB1873 hypothetical protein
YP_001762810.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet2939 probable acetyltransferase
YP_001762811.1	PFAM: protein of unknown function DUF1568; KEGG: spl:Spea_2922 protein of unknown function DUF1568
YP_001762813.1	PFAM: transcriptional regulator domain protein; KEGG: spl:Spea_0489 transcriptional regulator, CadC
YP_001762814.1	KEGG: spl:Spea_0488 copper ABC transporter, permease protein
YP_001762815.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spl:Spea_0487 ABC transporter related
YP_001762816.1	PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: spl:Spea_0486 periplasmic copper-binding
YP_001762817.1	PFAM: NosL family protein; KEGG: spl:Spea_0485 NosL family protein
YP_001762818.1	PFAM: Polysulphide reductase NrfD; KEGG: spl:Spea_0484 polysulphide reductase NrfD
YP_001762819.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: spl:Spea_0483 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_001762820.1	KEGG: spl:Spea_0482 hypothetical protein
YP_001762821.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: spl:Spea_0481 peptidylprolyl isomerase FKBP-type
YP_001762822.1	SMART: Rhodanese domain protein; KEGG: spl:Spea_0480 rhodanese domain protein
YP_001762823.1	KEGG: spl:Spea_0479 cytochrome c, putative
YP_001762824.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: spl:Spea_0478 cytochrome c-type biogenesis protein CcmF
YP_001762825.1	PFAM: cytochrome C biogenesis protein; KEGG: spl:Spea_0477 cytochrome c biogenesis protein
YP_001762826.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: spl:Spea_0476 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_001762827.1	KEGG: sse:Ssed_0478 transcriptional regulator, XRE family
YP_001762828.1	KEGG: sse:Ssed_0477 hypothetical protein
YP_001762829.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sse:Ssed_0476 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001762830.1	KEGG: sdn:Sden_3303 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1
YP_001762831.1	PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sdn:Sden_3304 transcriptional regulatory protein-like protein
YP_001762832.1	PFAM: Na+/H+ antiporter NhaC; KEGG: sse:Ssed_0475 Na+/H+ antiporter NhaC
YP_001762833.1	KEGG: vha:VIBHAR_05575 hypothetical protein
YP_001762834.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; KEGG: vpa:VPA1071 putative extracellular serine protease
YP_001762835.1	KEGG: sse:Ssed_0473 hypothetical protein
YP_001762836.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sse:Ssed_3412 peptidase S9, prolyl oligopeptidase active site domain protein
YP_001762837.1	KEGG: sdn:Sden_2175 hypothetical protein
YP_001762838.1	PFAM: Choloylglycine hydrolase; KEGG: sdn:Sden_0442 choloylglycine hydrolase
YP_001762839.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: spl:Spea_3412 diguanylate cyclase
YP_001762840.1	KEGG: sbl:Sbal_3792 hypothetical protein
YP_001762841.1	PFAM: putative esterase; KEGG: spl:Spea_0471 putative esterase
YP_001762842.1	KEGG: spl:Spea_0472 conserved hypothetical protein
YP_001762843.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_001762844.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.
YP_001762845.1	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: pat:Patl_3769 transcriptional regulator, CadC
YP_001762846.1	PFAM: beta-lactamase; KEGG: pat:Patl_3770 beta-lactamase
YP_001762847.1	KEGG: pin:Ping_0239 hypothetical protein
YP_001762849.1	PFAM: Endoribonuclease L-PSP; KEGG: sse:Ssed_0466 endoribonuclease, L-PSP family
YP_001762850.1	PFAM: NUDIX hydrolase; KEGG: sfr:Sfri_2278 NUDIX hydrolase
YP_001762851.1	PFAM: band 7 protein; KEGG: sse:Ssed_0465 band 7 protein
YP_001762852.1	PFAM: band 7 protein; KEGG: sse:Ssed_0464 band 7 protein
YP_001762853.1	PFAM: protein of unknown function DUF107; KEGG: sse:Ssed_0463 protein of unknown function DUF107
YP_001762854.1	KEGG: sse:Ssed_0462 hypothetical protein
YP_001762855.1	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway
YP_001762856.1	PFAM: protein of unknown function DUF465; KEGG: sse:Ssed_0459 protein of unknown function DUF465
YP_001762857.1	KEGG: sse:Ssed_0458 hypothetical protein
YP_001762858.1	PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_0457 MscS mechanosensitive ion channel
YP_001762859.1	PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: spl:Spea_0456 OmpA domain protein transmembrane region-containing protein
YP_001762860.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_0455 transcriptional regulator, LysR family
YP_001762861.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spl:Spea_0454 transcriptional regulator, LysR family
YP_001762862.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sse:Ssed_0456 radical SAM domain protein
YP_001762863.1	KEGG: spl:Spea_0450 conserved hypothetical protein
YP_001762864.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: sse:Ssed_0448 peptidase
YP_001762865.1	PFAM: protein of unknown function DUF28; KEGG: sse:Ssed_0450 protein of unknown function DUF28
YP_001762866.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sse:Ssed_0451 transcriptional regulator, LysR family
YP_001762867.1	PFAM: secretion protein HlyD family protein; KEGG: sse:Ssed_0452 secretion protein HlyD family protein
YP_001762868.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sse:Ssed_0453 drug resistance transporter, EmrB/QacA subfamily
YP_001762869.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_0454 GCN5-related N-acetyltransferase
YP_001762870.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_001762871.1	PFAM: peptidase M23B; KEGG: sse:Ssed_0417 peptidase M23B
YP_001762872.1	KEGG: spl:Spea_3805 conserved hypothetical protein
YP_001762873.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_001762874.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_001762875.1	PFAM: cell division protein FtsA; KEGG: sse:Ssed_0413 cell division protein FtsA
YP_001762876.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: sse:Ssed_0412 polypeptide-transport-associated domain protein, FtsQ-type
YP_001762877.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_001762878.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_001762879.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: sse:Ssed_0409 cell division protein FtsW
YP_001762880.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_001762881.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_001762882.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sse:Ssed_0406 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_001762883.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_001762884.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: sse:Ssed_0404 peptidoglycan glycosyltransferase
YP_001762885.1	PFAM: cell division protein FtsL; KEGG: sse:Ssed_0403 cell division protein FtsL
YP_001762886.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: sse:Ssed_0402 S-adenosyl-methyltransferase MraW
YP_001762887.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_001762888.1	KEGG: sse:Ssed_0400 hypothetical protein
YP_001762889.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: sse:Ssed_0399 glycerol kinase
YP_001762890.1	KEGG: sse:Ssed_0398 hypothetical protein
YP_001762891.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: spl:Spea_3824 membrane protein involved in aromatic hydrocarbon degradation
YP_001762892.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_001762893.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_001762894.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_001762895.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_001762896.1	SMART: Tetratricopeptide domain protein; KEGG: sse:Ssed_0392 response regulator receiver protein
YP_001762897.1	KEGG: sse:Ssed_0391 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_001762898.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_0390 hypothetical protein
YP_001762899.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: sse:Ssed_0389 RarD protein
YP_001762900.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sal:Sala_1010 TonB-dependent receptor
YP_001762901.1	KEGG: spl:Spea_0617 hypothetical protein
YP_001762902.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: pat:Patl_3367 transcriptional regulator, Crp/Fnr family
YP_001762903.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_001762904.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_001762905.1	required for 70S ribosome assembly
YP_001762906.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_001762907.1	KEGG: sse:Ssed_0384 phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein
YP_001762908.1	catalyzes the formation of dUMP from dUTP
YP_001762909.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_001762910.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: spl:Spea_3841 peptidase S9 prolyl oligopeptidase active site domain protein
YP_001762911.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_001762912.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_001762913.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_001762914.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: sse:Ssed_0377 YicC N-terminal domain protein
YP_001762915.1	PFAM: helix-turn-helix domain protein; KEGG: sse:Ssed_0376 transcriptional regulator, XRE family
YP_001762916.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sse:Ssed_0375 HipA domain protein
YP_001762917.1	PFAM: domain of unknown function DUF1732; KEGG: sse:Ssed_0377 YicC N-terminal domain protein
YP_001762918.1	TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: sbm:Shew185_1871 HipA domain protein
YP_001762919.1	SMART: helix-turn-helix domain protein; KEGG: sbm:Shew185_3350 putative transcriptional regulator, XRE family
YP_001762920.1	KEGG: sde:Sde_3692 amino acid adenylation
YP_001762921.1	KEGG: saz:Sama_0272 hypothetical protein
YP_001762922.1	KEGG: spl:Spea_3873 protein of unknown function DUF159
YP_001762923.1	PFAM: aminoglycoside phosphotransferase; KEGG: sse:Ssed_0339 aminoglycoside phosphotransferase
YP_001762924.1	KEGG: sse:Ssed_0338 hypothetical protein
YP_001762925.1	KEGG: sse:Ssed_0337 hypothetical protein
YP_001762926.1	Essential for recycling GMP and indirectly, cGMP
YP_001762927.1	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_001762928.1	KEGG: sse:Ssed_0334 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_001762929.1	TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: sse:Ssed_0333 putative endoribonuclease L-PSP
YP_001762930.1	specifically modifies tRNA at position G18
YP_001762931.1	KEGG: sdn:Sden_3554 hypothetical protein
YP_001762932.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sse:Ssed_0331 AMP-dependent synthetase and ligase
YP_001762933.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: sse:Ssed_0330 Na+/Ca+ antiporter, CaCA family
YP_001762934.1	PFAM: TPR repeat-containing protein; KEGG: sbl:Sbal_0349 tetratricopeptide TPR_2 repeat protein
YP_001762935.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: slo:Shew_3505 integral membrane sensor signal transduction histidine kinase
YP_001762936.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: slo:Shew_3506 two component transcriptional regulator, LuxR family
YP_001762937.1	catalyzes branch migration in Holliday junction intermediates
YP_001762938.1	KEGG: sse:Ssed_0328 hypothetical protein
YP_001762939.1	KEGG: sse:Ssed_0327 hypothetical protein
YP_001762940.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: sse:Ssed_0326 phospholipid/glycerol acyltransferase
YP_001762941.1	KEGG: sfr:Sfri_0352 hypothetical protein
YP_001762942.1	carries the fatty acid chain in fatty acid biosynthesis
YP_001762943.1	KEGG: sse:Ssed_0323 hypothetical protein
YP_001762944.1	KEGG: sse:Ssed_0322 hypothetical protein
YP_001762945.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sse:Ssed_0321 thioester dehydrase family protein
YP_001762946.1	PFAM: glycosyl transferase family 2; lipid A biosynthesis acyltransferase; KEGG: sse:Ssed_0320 glycosyl transferase, family 2
YP_001762947.1	PFAM: phenylalanine/histidine ammonia-lyase; KEGG: sse:Ssed_0319 histidine ammonia-lyase
YP_001762948.1	KEGG: sse:Ssed_0318 thioesterase superfamily protein
YP_001762949.1	KEGG: sse:Ssed_0317 hypothetical protein
YP_001762950.1	PFAM: Patched family protein; KEGG: sse:Ssed_0316 hypothetical protein
YP_001762951.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sse:Ssed_0315 tryptophan halogenase
YP_001762953.1	KEGG: sse:Ssed_0314 hypothetical protein
YP_001762954.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001762955.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sse:Ssed_0312 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_001762956.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_001762957.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_001762958.1	KEGG: ilo:IL0249 hypothetical protein
YP_001762959.1	TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; KEGG: spl:Spea_3905 thioesterase domain, putative
YP_001762960.1	PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: spl:Spea_3906 D-tyrosyl-tRNA(Tyr) deacylase
YP_001762961.1	KEGG: sse:Ssed_0304 hypothetical protein
YP_001762962.1	PFAM: alpha/beta hydrolase fold; KEGG: sse:Ssed_0303 alpha/beta hydrolase fold
YP_001762963.1	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease
YP_001762964.1	KEGG: sse:Ssed_0301 hypothetical protein
YP_001762965.1	KEGG: spl:Spea_3911 conserved hypothetical protein
YP_001762966.1	KEGG: hch:HCH_03667 hypothetical protein
YP_001762967.1	KEGG: hch:HCH_03666 hypothetical protein
YP_001762968.1	PFAM: peptidase domain protein; KEGG: hch:HCH_03665 predicted phosphohydrolase
YP_001762969.1	KEGG: sdn:Sden_3123 hypothetical protein
YP_001762970.1	KEGG: sdn:Sden_3123 hypothetical protein
YP_001762973.1	KEGG: tko:TK0952 ATPase involved in chromosome partitioning, ParA/MinD family
YP_001762975.1	SMART: TIR protein; KEGG: rpb:RPB_2632 TIR
YP_001762976.1	KEGG: ypi:YpsIP31758_B0075 putative conjugal transfer protein TraE
YP_001762977.1	PFAM: Protein of unknown function DUF1778; KEGG: sbm:Shew185_0723 protein of unknown function DUF1778
YP_001762978.1	KEGG: sbm:Shew185_0724 GCN5-related N-acetyltransferase
YP_001762979.1	PFAM: peptidase S41; KEGG: slo:Shew_2716 peptidase S41
YP_001762980.1	KEGG: slo:Shew_2717 hypothetical protein
YP_001762982.1	TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: spl:Spea_3913 pyridoxal kinase
YP_001762984.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5715 TPR domain protein
YP_001762985.1	KEGG: scl:sce5714 hypothetical protein
YP_001762986.1	PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: scl:sce5713 cell division cycle protein 48-related protein
YP_001762987.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sse:Ssed_0293 GTP-binding protein TypA
YP_001762988.1	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme
YP_001762989.1	PFAM: NMT1/THI5 like domain protein; KEGG: sse:Ssed_0291 ABC-type nitrate/sulfonate/bicarbonate transport system protein
YP_001762990.1	KEGG: sse:Ssed_0290 histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein
YP_001762991.1	PFAM: sodium:dicarboxylate symporter; KEGG: spl:Spea_3917 sodium:dicarboxylate symporter
YP_001762992.1	KEGG: ppr:PBPRA2050 hypothetical protein
YP_001762993.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; Carbohydrate-binding family V/XII; KEGG: pmy:Pmen_4109 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_001762994.1	KEGG: sse:Ssed_0284 hypothetical protein
YP_001762995.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sse:Ssed_0283 signal transduction histidine kinase, nitrogen specific, NtrB
YP_001762996.1	KEGG: sse:Ssed_0282 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_001762998.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_4281 redoxin domain protein
YP_001762999.1	TIGRFAM: cytochrome c nitrite reductase, accessory protein NrfF; PFAM: cytochrome C biogenesis protein; KEGG: sse:Ssed_4282 cytochrome c biogenesis protein
YP_001763000.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sse:Ssed_4283 periplasmic protein thiol--disulphide oxidoreductase DsbE
YP_001763001.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sse:Ssed_4284 cytochrome c-type biogenesis protein CcmF
YP_001763002.1	KEGG: sse:Ssed_4285 TPR repeat-containing protein; TIGRFAM: cytochrome c-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_001763003.1	KEGG: sse:Ssed_4286 cytochrome c, class I
YP_001763004.1	ATP-binding protein; required for proper cytochrome c maturation
YP_001763005.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: sse:Ssed_4288 heme exporter protein CcmB
YP_001763006.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: slo:Shew_0188 heme exporter protein CcmC
YP_001763007.1	TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); KEGG: slo:Shew_0187 heme exporter protein D (CcmD)
YP_001763008.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_001763009.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_001763010.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_001763011.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_001763012.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_001763013.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_001763014.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_001763015.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_001763016.1	late assembly protein
YP_001763017.1	PFAM: ribosomal protein L30; KEGG: slo:Shew_0176 ribosomal protein L30
YP_001763018.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_001763019.1	binds 5S rRNA along with protein L5 and L25
YP_001763020.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_001763021.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_001763022.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_001763023.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_001763024.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_001763025.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_001763026.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_001763027.1	one of the stabilizing components for the large ribosomal subunit
YP_001763028.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_001763029.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_001763030.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_001763031.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_001763032.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_001763033.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_001763034.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_001763035.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_001763036.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_001763037.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001763038.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_001763039.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_001763040.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_001763041.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_001763042.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_001763043.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_001763044.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_001763045.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_001763046.1	binds directly to 23S ribosomal RNA
YP_001763047.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: sse:Ssed_4329 NusG antitermination factor
YP_001763048.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_001763049.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_001763050.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_001763051.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_001763052.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_001763053.1	PFAM: RNP-1 like RNA-binding protein; KEGG: sse:Ssed_4336 RNP-1-like RNA-binding protein
YP_001763054.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_001763055.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_001763056.1	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis
YP_001763057.1	PFAM: fatty acid desaturase; KEGG: sse:Ssed_4340 stearoyl-CoA 9-desaturase
YP_001763058.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_001763059.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_001763060.1	PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0133 phospholipid/glycerol acyltransferase
YP_001763061.1	PFAM: GCN5-related N-acetyltransferase; KEGG: spl:Spea_0158 GCN5-related N-acetyltransferase
YP_001763062.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sse:Ssed_4345 3'(2'),5'-bisphosphate nucleotidase
YP_001763063.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_001763064.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_4347 HAD-superfamily hydrolase, subfamily IA, variant 3
YP_001763065.1	PFAM: helix-turn-helix domain protein; KEGG: dsy:DSY1729 hypothetical protein
YP_001763066.1	PFAM: fatty acid desaturase; KEGG: hch:HCH_03146 fatty-acid desaturase
YP_001763067.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sfr:Sfri_0864 transposase IS116/IS110/IS902 family protein
YP_001763068.1	KEGG: sdn:Sden_0643 hypothetical protein
YP_001763069.1	PFAM: type II secretion system protein N; KEGG: sse:Ssed_4348 type II secretion system protein N
YP_001763070.1	PFAM: General secretion pathway M protein; KEGG: sse:Ssed_4349 general secretion pathway M protein
YP_001763071.1	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: sse:Ssed_4350 general secretion pathway protein L
YP_001763072.1	PFAM: General secretion pathway protein K; KEGG: sse:Ssed_4351 general secretion pathway protein K
YP_001763073.1	TIGRFAM: general secretion pathway protein J; KEGG: slo:Shew_3613 general secretion pathway protein J
YP_001763074.1	TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: sse:Ssed_4353 general secretion pathway protein I
YP_001763075.1	TIGRFAM: general secretion pathway protein H; KEGG: sse:Ssed_4354 general secretion pathway protein H
YP_001763076.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: spl:Spea_0147 general secretion pathway protein G
YP_001763077.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: sse:Ssed_4356 general secretion pathway protein F
YP_001763078.1	KEGG: sse:Ssed_4357 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_001763079.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: slo:Shew_3619 general secretion pathway protein D
YP_001763080.1	TIGRFAM: general secretion pathway protein C; KEGG: sse:Ssed_4359 general secretion pathway protein C
YP_001763081.1	PFAM: RNA-binding S4 domain protein; KEGG: sse:Ssed_4360 RNA-binding S4 domain protein
YP_001763082.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_001763083.1	TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: spl:Spea_2952 YidE/YbjL duplication
YP_001763084.1	TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: vfi:VF1064 glutamate decarboxylase
YP_001763085.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_001763086.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bcz:BCZK2143 hypothetical protein
YP_001763087.1	KEGG: sde:Sde_2844 hypothetical protein
YP_001763088.1	PFAM: transcriptional regulator domain protein; KEGG: sde:Sde_2870 putative transcriptional regulator, CadC
YP_001763089.1	KEGG: sse:Ssed_4363 hypothetical protein
YP_001763090.1	PFAM: helix-turn-helix domain protein; KEGG: sse:Ssed_4364 transcriptional regulator protein-like protein
YP_001763091.1	KEGG: bpl:BURPS1106A_0087 methionine sulfoxide reductase A
YP_001763093.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO_1890 hypothetical protein
YP_001763094.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: amr:AM1_B0070 glyoxalase/bleomycin resistance protein/dioxygenase
YP_001763095.1	PFAM: aminotransferase class I and II; KEGG: spl:Spea_3654 aminotransferase class I and II
YP_001763096.1	KEGG: dra:DR_1805 hypothetical protein
YP_001763097.1	SMART: Beta-propeller repeat TECPR; KEGG: dra:DR_1805 hypothetical protein
YP_001763098.1	PFAM: peptidase M14 carboxypeptidase A; KEGG: sse:Ssed_4365 conserved hypothetical carboxypeptidase
YP_001763099.1	KEGG: sse:Ssed_4366 hypothetical protein
YP_001763100.1	PFAM: NapC/NirT cytochrome c domain protein; KEGG: sse:Ssed_4367 putative cytochrome c-type protein
YP_001763101.1	KEGG: sfr:Sfri_0099 hypothetical protein
YP_001763102.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sse:Ssed_4368 methyltransferase type 12
YP_001763103.1	KEGG: sse:Ssed_4369 lipoprotein, putative
YP_001763104.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: slo:Shew_0037 phosphoesterase, PA-phosphatase related
YP_001763105.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: slo:Shew_0037 phosphoesterase, PA-phosphatase related
YP_001763106.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: sse:Ssed_4370 excinuclease ABC, C subunit domain protein
YP_001763107.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sse:Ssed_4371 oligopeptidase B
YP_001763108.1	DHBP synthase; functions during riboflavin biosynthesis
YP_001763109.1	KEGG: sse:Ssed_4373 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; Nitrate and nitrite sensing domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_001763110.1	PFAM: Ferritin Dps family protein; KEGG: sse:Ssed_4374 ferroxidase
YP_001763111.1	PFAM: acriflavin resistance protein; KEGG: sse:Ssed_4375 acriflavin resistance protein
YP_001763112.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sse:Ssed_4376 efflux transporter, RND family, MFP subunit
YP_001763113.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sse:Ssed_4377 molybdenum cofactor synthesis domain protein
YP_001763114.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_001763115.1	PFAM: protein of unknown function DUF333; KEGG: spl:Spea_0124 protein of unknown function DUF333
YP_001763116.1	KEGG: sse:Ssed_4381 hypothetical protein
YP_001763117.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sse:Ssed_4382 sigma-24 (FecI-like)
YP_001763118.1	KEGG: sse:Ssed_4383 hypothetical protein
YP_001763119.1	PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: sse:Ssed_4384 hypothetical protein
YP_001763120.1	KEGG: sse:Ssed_4385 hypothetical protein
YP_001763121.1	PFAM: sodium/glutamate symporter; KEGG: sse:Ssed_4386 sodium/glutamate symporter
YP_001763122.1	PFAM: sodium/glutamate symporter; KEGG: sse:Ssed_4386 sodium/glutamate symporter
YP_001763123.1	KEGG: shn:Shewana3_0287 hypothetical protein
YP_001763124.1	PFAM: protein of unknown function UPF0057; KEGG: slo:Shew_0100 protein of unknown function UPF0057
YP_001763125.1	TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: sse:Ssed_4390 pseudouridine synthase Rlu family protein, TIGR01621
YP_001763126.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sse:Ssed_4391 integral membrane sensor signal transduction histidine kinase
YP_001763127.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sse:Ssed_4392 two component transcriptional regulator, winged helix family
YP_001763128.1	KEGG: sse:Ssed_4393 hypothetical protein
YP_001763129.1	PFAM: conserved hypothetical protein; KEGG: sse:Ssed_4394 hypothetical protein
YP_001763130.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_4395 ABC transporter-related protein
YP_001763131.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sse:Ssed_4396 molybdate ABC transporter, inner membrane subunit
YP_001763132.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sse:Ssed_4397 molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_001763133.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: sse:Ssed_4398 molybdopterin biosynthesis protein MoaE
YP_001763134.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: sse:Ssed_4399 molybdopterin converting factor, subunit 1
YP_001763135.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_001763136.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: sse:Ssed_4401 molybdenum cofactor biosynthesis protein B
YP_001763137.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_001763138.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: sse:Ssed_4403 electron-transferring-flavoprotein dehydrogenase
YP_001763139.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sse:Ssed_4404 methyl-accepting chemotaxis sensory transducer
YP_001763140.1	KEGG: sse:Ssed_4405 hypothetical protein
YP_001763141.1	PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: sse:Ssed_4406 MOSC domain containing protein
YP_001763142.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sse:Ssed_4411 diguanylate cyclase
YP_001763143.1	PFAM: PfkB domain protein; KEGG: sse:Ssed_4412 site-specific DNA-methyltransferase (adenine-specific)
YP_001763144.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3354 GCN5-related N-acetyltransferase
YP_001763145.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sse:Ssed_4413 GCN5-related N-acetyltransferase
YP_001763146.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: slo:Shew_0076 antibiotic biosynthesis monooxygenase
YP_001763147.1	KEGG: slo:Shew_0075 hypothetical protein
YP_001763148.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vha:VIBHAR_06296 transcriptional regulator
YP_001763150.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_001763151.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sse:Ssed_4415 formate dehydrogenase, C subunit, putative
YP_001763152.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_4416 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001763153.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_4417 molybdopterin oxidoreductase
YP_001763154.1	TIGRFAM: formate dehydrogenase region TAT target; KEGG: sse:Ssed_4418 hypothetical protein
YP_001763155.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: spl:Spea_4135 formate dehydrogenase, gamma subunit
YP_001763156.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: slo:Shew_0060 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001763157.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sse:Ssed_4421 molybdopterin oxidoreductase
YP_001763158.1	TIGRFAM: formate dehydrogenase region TAT target; KEGG: sse:Ssed_4422 twin-arginine translocation pathway signal
YP_001763159.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: sse:Ssed_4423 cytoplasmic chaperone TorD family protein
YP_001763160.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sse:Ssed_4424 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001763161.1	KEGG: sse:Ssed_4425 hypothetical protein
YP_001763162.1	KEGG: sse:Ssed_4426 hypothetical protein
YP_001763163.1	PFAM: formate dehydrogenase subunit FdhD; KEGG: sse:Ssed_4427 formate dehydrogenase, subunit FdhD
YP_001763164.1	TIGRFAM: DNA binding domain protein, excisionase family; KEGG: sse:Ssed_4428 DNA binding domain, excisionase family
YP_001763165.1	KEGG: ilo:IL0309 hypothetical protein
YP_001763166.1	PFAM: Pirin domain protein; KEGG: cps:CPS_3611 hypothetical protein
YP_001763167.1	PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_03985 histone acetyltransferase HPA2/related acetyltransferase
YP_001763168.1	PFAM: protein of unknown function DUF890; KEGG: sse:Ssed_4429 protein of unknown function DUF890
YP_001763169.1	PFAM: flagellar basal body-associated protein FliL; KEGG: sse:Ssed_4430 flagellar basal body-associated protein FliL
YP_001763170.1	PFAM: Chorismate lyase; KEGG: sse:Ssed_4431 chorismate lyase
YP_001763171.1	TIGRFAM: M6 family metalloprotease domain protein; PFAM: PKD domain containing protein; peptidase M6 immune inhibitor A; KEGG: sse:Ssed_4432 peptidase M6, immune inhibitor A
YP_001763172.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sse:Ssed_4435 multiple antibiotic resistance (MarC)-related protein
YP_001763173.1	KEGG: sse:Ssed_4436 hypothetical protein
YP_001763174.1	PFAM: protein of unknown function DUF833; KEGG: sse:Ssed_4437 protein of unknown function DUF833
YP_001763175.1	KEGG: sse:Ssed_4439 hypothetical protein
YP_001763176.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: sse:Ssed_4440 phospholipid/glycerol acyltransferase
YP_001763177.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_4441 lysine exporter protein (LysE/YggA)
YP_001763178.1	PFAM: MscS Mechanosensitive ion channel; KEGG: sse:Ssed_4442 MscS mechanosensitive ion channel
YP_001763179.1	KEGG: sse:Ssed_4443 hypothetical protein
YP_001763180.1	KEGG: spl:Spea_4162 conserved hypothetical protein
YP_001763181.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_001763182.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_001763183.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sse:Ssed_4448 transcriptional regulator, histidine utilization repressor, GntR family
YP_001763184.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_001763185.1	KEGG: shw:Sputw3181_4007 hypothetical protein
YP_001763186.1	KEGG: shn:Shewana3_2728 hypothetical protein
YP_001763187.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: sse:Ssed_4451 outer membrane protein, putative
YP_001763189.1	KEGG: sse:Ssed_4452 hypothetical protein
YP_001763190.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sde:Sde_3733 response regulator receiver domain protein (CheY-like)
YP_001763191.1	PFAM: histidine kinase internal region; KEGG: sde:Sde_3732 putative regulator of cell autolysis-like
YP_001763192.1	PFAM: protein of unknown function DUF214; KEGG: pha:PSHAa2828 ABC transporter permease protein
YP_001763193.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pha:PSHAa2827 ABC transporter ATP-binding protein
YP_001763194.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pha:PSHAa2826 substate-binding protein involved in drug resistance
YP_001763195.1	KEGG: pha:PSHAa2825 hypothetical protein
YP_001763197.1	KEGG: xoo:XOO0151 putative ISXo8 transposase
YP_001763199.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_4454 2,3-diketo-5-methylthio-1-phosphopentane phosphatase
YP_001763200.1	KEGG: sse:Ssed_4455 hypothetical protein
YP_001763201.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_4456 thioesterase superfamily
YP_001763202.1	KEGG: sse:Ssed_4457 hypothetical protein
YP_001763203.1	PFAM: thioesterase superfamily protein; KEGG: sse:Ssed_4458 thioesterase superfamily protein
YP_001763204.1	PFAM: AMP-dependent synthetase and ligase; KEGG: spl:Spea_4186 AMP-dependent synthetase and ligase
YP_001763205.1	KEGG: spl:Spea_4187 conserved hypothetical protein
YP_001763206.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: spl:Spea_4188 ABC transporter related
YP_001763207.1	PFAM: regulatory protein GntR HTH; KEGG: spl:Spea_4189 transcriptional regulator, GntR family
YP_001763208.1	PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sse:Ssed_4460 TAP domain protein
YP_001763209.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_4461 ABC transporter-related protein
YP_001763210.1	PFAM: ABC-2 type transporter; KEGG: sse:Ssed_4462 ABC-2 type transporter
YP_001763212.1	KEGG: spl:Spea_4193 conserved hypothetical protein
YP_001763213.1	PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: slo:Shew_3785 transcriptional regulator, AraC family
YP_001763214.1	KEGG: slo:Shew_3786 hypothetical protein
YP_001763215.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_001763216.1	PFAM: NLP/P60 protein; KEGG: sse:Ssed_4465 NLP/P60 protein
YP_001763217.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sse:Ssed_4466 hypothetical protein
YP_001763218.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_001763219.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_001763220.1	PFAM: Rhodanese domain protein; KEGG: sse:Ssed_4469 rhodanese domain protein
YP_001763221.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_001763222.1	PFAM: peptidase M23B; KEGG: sse:Ssed_4471 peptidase M23B
YP_001763223.1	KEGG: sse:Ssed_4472 C-terminal processing peptidase; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_001763224.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: sse:Ssed_4473 protein of unknown function DUF610, YibQ
YP_001763225.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: shn:Shewana3_0047 transcriptional regulator, BadM/Rrf2 family
YP_001763226.1	PFAM: protein of unknown function UPF0153; KEGG: sse:Ssed_4475 protein of unknown function UPF0153
YP_001763228.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: sse:Ssed_4476 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_001763229.1	KEGG: sse:Ssed_4477 hypothetical protein
YP_001763230.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_001763231.1	KEGG: shn:Shewana3_4124 hypothetical protein
YP_001763232.1	PFAM: YheO domain protein; KEGG: sbn:Sbal195_3224 YheO domain protein
YP_001763233.1	PFAM: protein of unknown function DUF1063; KEGG: shn:Shewana3_2972 protein of unknown function DUF1063
YP_001763234.1	KEGG: spl:Spea_0810 serine transporter
YP_001763235.1	KEGG: cpy:Cphy_1704 conserved hypothetical protein
YP_001763236.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_001763237.1	PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sse:Ssed_4482 transcriptional regulator, DeoR family
YP_001763238.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sse:Ssed_4483 TonB-dependent siderophore receptor
YP_001763239.1	TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: sse:Ssed_4484 UDP-N-acetylglucosamine pyrophosphorylase
YP_001763240.1	KEGG: har:HEAR0729 hypothetical protein
YP_001763241.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_001763242.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_001763243.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_001763244.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_001763245.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_001763246.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_001763247.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_001763248.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_001763249.1	PFAM: ATP synthase I chain; KEGG: sse:Ssed_4493 ATP synthase I chain
YP_001763250.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sse:Ssed_4494 ParB family protein
YP_001763251.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sse:Ssed_4495 cobyrinic acid a,c-diamide synthase
YP_001763252.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_001763253.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_001763254.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_001763255.1	KEGG: sse:Ssed_4499 3-demethylubiquinone-9 3-O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12
YP_001763256.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sse:Ssed_4501 lysine exporter protein (LysE/YggA)
YP_001763257.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: saz:Sama_0284 sodium/alanine symporter
YP_001763258.1	PFAM: protein of unknown function DUF1006; KEGG: sfr:Sfri_3840 protein of unknown function DUF1006
YP_001763259.1	TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: spl:Spea_3851 nucleoside transporter
YP_001763260.1	PFAM: purine or other phosphorylase family 1; KEGG: spl:Spea_3850 purine or other phosphorylase family 1
YP_001763261.1	KEGG: mmw:Mmwyl1_4372 hypothetical protein
YP_001763262.1	KEGG: mmw:Mmwyl1_4373 hypothetical protein
YP_001763263.1	KEGG: mmw:Mmwyl1_4374 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_001763264.1	KEGG: sbl:Sbal_4430 hypothetical protein
YP_001763265.1	KEGG: sse:Ssed_4504 hypothetical protein
YP_001763266.1	PFAM: protein of unknown function DUF417; KEGG: vch:VC1587 hypothetical protein
YP_001763267.1	PFAM: Catalase domain protein; KEGG: sbm:Shew185_1572 catalase domain protein
YP_001763268.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: sse:Ssed_4506 filamentation induced by cAMP protein Fic
YP_001763270.1	KEGG: sse:Ssed_4507 hypothetical protein
YP_001763271.1	PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sse:Ssed_4508 putative ATP-dependent helicase
YP_001763272.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_001763273.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: sse:Ssed_0002 60 kDa inner membrane insertion protein
YP_001763274.1	PFAM: protein of unknown function DUF37; KEGG: sse:Ssed_0003 protein of unknown function DUF37
YP_001763275.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_001763276.1	in Escherichia coli transcription of this gene is enhanced by polyamines