-- dump date 20120504_161812 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001312323.1 150375727 5317878 197..3505 1 NC_009620.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 3505 5317878 Smed_3575 Sinorhizobium medicae WSM419 Dtr system oriT relaxase YP_001312323.1 197 D 366394 CDS YP_001312324.1 150375728 5318081 4121..4504 1 NC_009620.1 KEGG: sme:SMa1798 Kup2 potassium uptake protein; Kup2 potassium uptake protein 4504 5318081 Smed_3576 Sinorhizobium medicae WSM419 Kup2 potassium uptake protein YP_001312324.1 4121 D 366394 CDS YP_001312325.1 150375729 5317877 4501..4878 1 NC_009620.1 PFAM: protein of unknown function DUF454; KEGG: sme:SMb20557 hypothetical protein; hypothetical protein 4878 5317877 Smed_3577 Sinorhizobium medicae WSM419 hypothetical protein YP_001312325.1 4501 D 366394 CDS YP_001312326.1 150375730 5318082 complement(5353..6639) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20538 putative solute-binding protein; extracellular solute-binding protein 6639 5318082 Smed_3578 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312326.1 5353 R 366394 CDS YP_001312327.1 150375731 5318083 6785..7819 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20537 putative transcriptional regulator protein; periplasmic binding protein/LacI transcriptional regulator 7819 5318083 Smed_3579 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312327.1 6785 D 366394 CDS YP_001312328.1 150375732 5318084 7809..9662 1 NC_009620.1 KEGG: sme:SMb20536 hypothetical protein; hypothetical protein 9662 5318084 Smed_3580 Sinorhizobium medicae WSM419 hypothetical protein YP_001312328.1 7809 D 366394 CDS YP_001312329.1 150375733 5318085 9659..10666 1 NC_009620.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMb20535 putative dehydrogenase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 10666 5318085 Smed_3581 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001312329.1 9659 D 366394 CDS YP_001312330.1 150375734 5318086 10663..11472 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20534 hypothetical protein; xylose isomerase domain-containing protein 11472 5318086 Smed_3582 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001312330.1 10663 D 366394 CDS YP_001312331.1 150375735 5318574 11544..11954 1 NC_009620.1 KEGG: mlo:mll2216 hypothetical protein; hypothetical protein 11954 5318574 Smed_3583 Sinorhizobium medicae WSM419 hypothetical protein YP_001312331.1 11544 D 366394 CDS YP_001312332.1 150375736 5318575 11948..12646 1 NC_009620.1 PFAM: RES domain protein; KEGG: mlo:mll2215 hypothetical protein; RES domain-containing protein 12646 5318575 Smed_3584 Sinorhizobium medicae WSM419 RES domain-containing protein YP_001312332.1 11948 D 366394 CDS YP_001312333.1 150375737 5318576 complement(12701..13468) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMa0719 hypothetical protein; short-chain dehydrogenase/reductase SDR 13468 5318576 Smed_3585 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312333.1 12701 R 366394 CDS YP_001312334.1 150375738 5318577 complement(13478..15187) 1 NC_009620.1 PFAM: regulatory protein IclR; SMP-30/Gluconolaconase/LRE domain protein; Transcriptional regulator IclR; KEGG: sme:SMa0717 putative calcium binding transcriptional regulatory protein; SMP-30/gluconolaconase/LRE domain-containing protein 15187 5318577 Smed_3586 Sinorhizobium medicae WSM419 SMP-30/gluconolaconase/LRE domain-containing protein YP_001312334.1 13478 R 366394 CDS YP_001312335.1 150375739 5318578 complement(15166..16146) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: sme:SMa0715 putative UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 16146 5318578 Smed_3587 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312335.1 15166 R 366394 CDS YP_001312336.1 150375740 5318968 complement(16148..17236) 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_pAT_681 probable sugC protein; ABC transporter-like protein 17236 5318968 Smed_3588 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312336.1 16148 R 366394 CDS YP_001312337.1 150375741 5318969 complement(17238..18068) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0711 putative ABC transporter permease protein, MalFG family; binding-protein-dependent transport systems inner membrane component 18068 5318969 Smed_3589 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312337.1 17238 R 366394 CDS YP_001312338.1 150375742 5318970 complement(18080..18985) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0710 putative ABC transporter, sugar permease protein; binding-protein-dependent transport system inner membrane protein 18985 5318970 Smed_3590 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312338.1 18080 R 366394 CDS YP_001312339.1 150375743 5318971 complement(19283..20548) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMa0709 putative ABC sugar transport system sugar binding protein; extracellular solute-binding protein 20548 5318971 Smed_3591 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312339.1 19283 R 366394 CDS YP_001312340.1 150375744 5318972 complement(20581..21750) 1 NC_009620.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMa0708 putative isomerase; mandelate racemase/muconate lactonizing protein 21750 5318972 Smed_3592 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001312340.1 20581 R 366394 CDS YP_001312341.1 150375745 5318973 complement(21747..22709) 1 NC_009620.1 PFAM: dihydrodipicolinate synthetase; KEGG: sme:SMa0707 dihydrodipicolinate synthase, putative; dihydrodipicolinate synthetase 22709 5318973 Smed_3593 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001312341.1 21747 R 366394 CDS YP_001312342.1 150375746 5318974 22728..23702 1 NC_009620.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: sme:SMa0705 putative DgoK2 2-dehydro-3-deoxygalactonokinase; 2-keto-3-deoxy-galactonokinase 23702 5318974 Smed_3594 Sinorhizobium medicae WSM419 2-keto-3-deoxy-galactonokinase YP_001312342.1 22728 D 366394 CDS YP_001312343.1 150375747 5318975 23699..23884 1 NC_009620.1 hypothetical protein 23884 5318975 Smed_3595 Sinorhizobium medicae WSM419 hypothetical protein YP_001312343.1 23699 D 366394 CDS YP_001312344.1 150375748 5318977 complement(24208..24987) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: sme:SMb20511 short chain dehydrogenase; short chain dehydrogenase 24987 5318977 Smed_3597 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001312344.1 24208 R 366394 CDS YP_001312345.1 150375749 5318432 complement(25022..26170) 1 NC_009620.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMb20510 probable galactonate dehydratase protein; galactonate dehydratase 26170 5318432 Smed_3598 Sinorhizobium medicae WSM419 galactonate dehydratase YP_001312345.1 25022 R 366394 CDS YP_001312346.1 150375750 5318433 complement(26228..26983) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20509 putative transcriptional regulator protein; GntR family transcriptional regulator 26983 5318433 Smed_3599 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312346.1 26228 R 366394 CDS YP_001312347.1 150375751 5318434 27191..28174 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20508 putative ABC transporter periplasmic sugar-binding protein; monosaccharide-transporting ATPase 28174 5318434 Smed_3600 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312347.1 27191 D 366394 CDS YP_001312348.1 150375752 5318435 28238..29764 1 NC_009620.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 29764 araG 5318435 araG Sinorhizobium medicae WSM419 L-arabinose transporter ATP-binding protein YP_001312348.1 28238 D 366394 CDS YP_001312349.1 150375753 5318436 29767..30720 1 NC_009620.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 30720 araH 5318436 araH Sinorhizobium medicae WSM419 L-arabinose transporter permease YP_001312349.1 29767 D 366394 CDS YP_001312350.1 150375754 5318437 31108..32136 1 NC_009620.1 KEGG: sme:SMb20504 putative ABC transporter periplasmic sugar-binding protein; putative ABC transporter periplasmic sugar-binding protein 32136 5318437 Smed_3603 Sinorhizobium medicae WSM419 putative ABC transporter periplasmic sugar-binding protein YP_001312350.1 31108 D 366394 CDS YP_001312351.1 150375755 5318438 32198..33739 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20503 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 33739 5318438 Smed_3604 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312351.1 32198 D 366394 CDS YP_001312352.1 150375756 5318439 33759..34751 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20502 putative sugar ABC transporter permease protein; monosaccharide-transporting ATPase 34751 5318439 Smed_3605 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312352.1 33759 D 366394 CDS YP_001312353.1 150375757 5318440 34753..35757 1 NC_009620.1 PFAM: putative sugar-binding domain protein; KEGG: sme:SMb20501 putative transcriptional regulator protein; DeoR family transcriptional regulator 35757 5318440 Smed_3606 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001312353.1 34753 D 366394 CDS YP_001312354.1 150375758 5318618 35754..36749 1 NC_009620.1 PFAM: aldo/keto reductase; KEGG: sme:SMb20500 putative aldoketo reductase protein; aldo/keto reductase 36749 5318618 Smed_3607 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001312354.1 35754 D 366394 CDS YP_001312355.1 150375759 5318619 36806..38494 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb20499 putative glycerol-3-phosphate dehydrogenase protein; FAD dependent oxidoreductase 38494 5318619 Smed_3608 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001312355.1 36806 D 366394 CDS YP_001312356.1 150375760 5318620 38561..39403 1 NC_009620.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sme:SMb20498 hypothetical protein; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 39403 5318620 Smed_3609 Sinorhizobium medicae WSM419 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001312356.1 38561 D 366394 CDS YP_001312357.1 150375761 5318621 39434..40963 1 NC_009620.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMb20497 putative L-xylulose kinase protein; carbohydrate kinase FGGY 40963 5318621 Smed_3610 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001312357.1 39434 D 366394 CDS YP_001312358.1 150375762 5318622 40960..42564 1 NC_009620.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sme:SMb20496 probable GMC oxidoreductase protein; glucose-methanol-choline oxidoreductase 42564 5318622 Smed_3611 Sinorhizobium medicae WSM419 glucose-methanol-choline oxidoreductase YP_001312358.1 40960 D 366394 CDS YP_001312359.1 150375763 5318623 43270..46539 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll5958 hypothetical protein; adenylyl cyclase class-3/4/guanylyl cyclase 46539 5318623 Smed_3612 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001312359.1 43270 D 366394 CDS YP_001312360.1 150375764 5318624 complement(46975..47631) 1 NC_009620.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: ret:RHE_CH01008 hypothetical protein; alkyl hydroperoxide reductase 47631 5318624 Smed_3613 Sinorhizobium medicae WSM419 alkyl hydroperoxide reductase YP_001312360.1 46975 R 366394 CDS YP_001312361.1 150375765 5318625 48651..49637 1 NC_009620.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sme:SMa1516 NADH dehydrogenase I chain H; NADH dehydrogenase (quinone) 49637 5318625 Smed_3614 Sinorhizobium medicae WSM419 NADH dehydrogenase (quinone) YP_001312361.1 48651 D 366394 CDS YP_001312362.1 150375766 5318626 49637..50272 1 NC_009620.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMa1519 putative oxidoreductase; NADH-quinone oxidoreductase subunit I 50272 5318626 Smed_3615 Sinorhizobium medicae WSM419 NADH-quinone oxidoreductase subunit I YP_001312362.1 49637 D 366394 CDS YP_001312363.1 150375767 5318627 50315..50755 1 NC_009620.1 PFAM: CBS domain containing protein; KEGG: sme:SMa1521 hypothetical protein; signal-transduction protein 50755 5318627 Smed_3616 Sinorhizobium medicae WSM419 signal-transduction protein YP_001312363.1 50315 D 366394 CDS YP_001312364.1 150375768 5318148 complement(50839..53391) 1 NC_009620.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMa1523 NADH dehydrogenase I chain G; molybdopterin oxidoreductase 53391 5318148 Smed_3617 Sinorhizobium medicae WSM419 molybdopterin oxidoreductase YP_001312364.1 50839 R 366394 CDS YP_001312365.1 150375769 5318149 complement(53420..54685) 1 NC_009620.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sme:SMa1525 NADH dehydrogenase I chain F; NADH-quinone oxidoreductase subunit F 54685 5318149 Smed_3618 Sinorhizobium medicae WSM419 NADH-quinone oxidoreductase subunit F YP_001312365.1 53420 R 366394 CDS YP_001312366.1 150375770 5318150 complement(54689..55198) 1 NC_009620.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMa1526 NADH dehydrogenase I chain E; NADH-quinone oxidoreductase subunit E 55198 5318150 Smed_3619 Sinorhizobium medicae WSM419 NADH-quinone oxidoreductase subunit E YP_001312366.1 54689 R 366394 CDS YP_001312367.1 150375771 5318151 complement(55217..56431) 1 NC_009620.1 TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: sme:SMa1529 NADH dehydrogenase I chain D; NADH dehydrogenase I subunit D 56431 5318151 Smed_3620 Sinorhizobium medicae WSM419 NADH dehydrogenase I subunit D YP_001312367.1 55217 R 366394 CDS YP_001312368.1 150375772 5318152 complement(56449..56997) 1 NC_009620.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: sme:SMa1531 NADH dehydrogenase I chain C; NADH (or F420H2) dehydrogenase subunit C 56997 5318152 Smed_3621 Sinorhizobium medicae WSM419 NADH (or F420H2) dehydrogenase subunit C YP_001312368.1 56449 R 366394 CDS YP_001312369.1 150375773 5318153 complement(56994..57497) 1 NC_009620.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 57497 5318153 Smed_3622 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit B YP_001312369.1 56994 R 366394 CDS YP_001312370.1 150375774 5318154 complement(57485..57850) 1 NC_009620.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: sme:SMa1533 NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 57850 5318154 Smed_3623 Sinorhizobium medicae WSM419 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001312370.1 57485 R 366394 CDS YP_001312371.1 150375775 5318155 complement(58063..59502) 1 NC_009620.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sme:SMa1535 NADH dehydrogenase I chain N; proton-translocating NADH-quinone oxidoreductase subunit N 59502 5318155 Smed_3624 Sinorhizobium medicae WSM419 proton-translocating NADH-quinone oxidoreductase subunit N YP_001312371.1 58063 R 366394 CDS YP_001312372.1 150375776 5318156 complement(59499..60974) 1 NC_009620.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sme:SMa1536 NuoM2 NADH-Ubiquinone/plastoquinone (complex I) oxidoreductase; proton-translocating NADH-quinone oxidoreductase subunit M 60974 5318156 Smed_3625 Sinorhizobium medicae WSM419 proton-translocating NADH-quinone oxidoreductase subunit M YP_001312372.1 59499 R 366394 CDS YP_001312373.1 150375777 5318312 complement(60982..62742) 1 NC_009620.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 62742 5318312 Smed_3626 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit D YP_001312373.1 60982 R 366394 CDS YP_001312374.1 150375778 5318313 complement(62735..62989) 1 NC_009620.1 hypothetical protein 62989 5318313 Smed_3627 Sinorhizobium medicae WSM419 hypothetical protein YP_001312374.1 62735 R 366394 CDS YP_001312375.1 150375779 5318314 complement(62986..64449) 1 NC_009620.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 64449 5318314 Smed_3628 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit D YP_001312375.1 62986 R 366394 CDS YP_001312376.1 150375780 5318315 complement(64454..64756) 1 NC_009620.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sme:SMa1544 NADH dehydrogenase I chain K; NADH-ubiquinone oxidoreductase chain 4L 64756 5318315 Smed_3629 Sinorhizobium medicae WSM419 NADH-ubiquinone oxidoreductase chain 4L YP_001312376.1 64454 R 366394 CDS YP_001312377.1 150375781 5318316 complement(64756..65256) 1 NC_009620.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: sme:SMa1545 putative oxidoreductase; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 65256 5318316 Smed_3630 Sinorhizobium medicae WSM419 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001312377.1 64756 R 366394 CDS YP_001312378.1 150375782 5318317 complement(65645..65833) 1 NC_009620.1 KEGG: rle:pRL100452 hypothetical protein; hypothetical protein 65833 5318317 Smed_3631 Sinorhizobium medicae WSM419 hypothetical protein YP_001312378.1 65645 R 366394 CDS YP_001312379.1 150375783 5318319 complement(67110..67826) 1 NC_009620.1 PFAM: class II aldolase/adducin family protein; KEGG: sme:SMb20490 putative L-fuculose phosphate aldolase protein; L-fuculose phosphate aldolase 67826 5318319 Smed_3633 Sinorhizobium medicae WSM419 L-fuculose phosphate aldolase YP_001312379.1 67110 R 366394 CDS YP_001312380.1 150375784 5318320 complement(67839..69287) 1 NC_009620.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMb20489 putative carbohydrate kinase protein; carbohydrate kinase FGGY 69287 5318320 Smed_3634 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001312380.1 67839 R 366394 CDS YP_001312381.1 150375785 5318321 complement(69334..70182) 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20488 hypothetical protein; xylose isomerase domain-containing protein 70182 5318321 Smed_3635 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001312381.1 69334 R 366394 CDS YP_001312382.1 150375786 5318178 complement(70185..71183) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20487 putative sugar ABC transporter permease protein; inner-membrane translocator 71183 5318178 Smed_3636 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312382.1 70185 R 366394 CDS YP_001312383.1 150375787 5318179 complement(71180..72181) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20486 putative sugar ABC transporter permease protein; monosaccharide-transporting ATPase 72181 5318179 Smed_3637 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312383.1 71180 R 366394 CDS YP_001312384.1 150375788 5318180 complement(72174..73700) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20485 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 73700 5318180 Smed_3638 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312384.1 72174 R 366394 CDS YP_001312385.1 150375789 5318181 complement(73809..74801) 1 NC_009620.1 KEGG: sme:SMb20484 putative ABC transporter periplasmic sugar-binding protein; putative ABC transporter periplasmic sugar-binding protein 74801 5318181 Smed_3639 Sinorhizobium medicae WSM419 putative ABC transporter periplasmic sugar-binding protein YP_001312385.1 73809 R 366394 CDS YP_001312386.1 150375790 5318182 75040..76107 1 NC_009620.1 PFAM: regulatory protein LacI; KEGG: sme:SMb20483 putative catabolite repressor protein; regulatory protein LacI 76107 5318182 Smed_3640 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001312386.1 75040 D 366394 CDS YP_001312387.1 150375791 5318183 complement(76152..77939) 1 NC_009620.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMb20482 hypothetical protein; glutathione synthase 77939 5318183 Smed_3641 Sinorhizobium medicae WSM419 glutathione synthase YP_001312387.1 76152 R 366394 CDS YP_001312388.1 150375792 5318184 complement(77941..79716) 1 NC_009620.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: sme:SMb20481 putative asparagine synthetase (glutamine amidotransferase) protein; asparagine synthase 79716 5318184 Smed_3642 Sinorhizobium medicae WSM419 asparagine synthase YP_001312388.1 77941 R 366394 CDS YP_001312389.1 150375793 5318185 complement(79836..80618) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20480 putative transcriptional regulator protein; GntR family transcriptional regulator 80618 5318185 Smed_3643 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312389.1 79836 R 366394 CDS YP_001312390.1 150375794 5318186 complement(80625..81422) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20479 putative dipeptide ABC transporter ATP-binding protein; ABC transporter-like protein 81422 5318186 Smed_3644 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312390.1 80625 R 366394 CDS YP_001312391.1 150375795 5318187 complement(81422..83221) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb20478 putative dipeptide ABC transporter permease and ATP-binding protein; ABC transporter-like protein 83221 5318187 Smed_3645 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312391.1 81422 R 366394 CDS YP_001312392.1 150375796 5318393 complement(83218..84165) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20477 putative didpeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 84165 5318393 Smed_3646 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312392.1 83218 R 366394 CDS YP_001312393.1 150375797 5318394 complement(84241..85770) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb20476 putative ABC transporter periplasmic dipeptide-binding protein; 4-phytase 85770 5318394 Smed_3647 Sinorhizobium medicae WSM419 4-phytase YP_001312393.1 84241 R 366394 CDS YP_001312394.1 150375798 5318395 complement(86016..86336) 1 NC_009620.1 hypothetical protein 86336 5318395 Smed_3648 Sinorhizobium medicae WSM419 hypothetical protein YP_001312394.1 86016 R 366394 CDS YP_001312395.1 150375799 5318396 86646..86996 1 NC_009620.1 KEGG: bur:Bcep18194_B1716 membrane protein-like; hypothetical protein 86996 5318396 Smed_3649 Sinorhizobium medicae WSM419 hypothetical protein YP_001312395.1 86646 D 366394 CDS YP_001312396.1 150375800 5318397 87250..88071 1 NC_009620.1 SMART: Rhodanese domain protein; KEGG: ret:RHE_CH02717 putative superoxide dismutase SodM-like protein; rhodanese domain-containing protein 88071 5318397 Smed_3650 Sinorhizobium medicae WSM419 rhodanese domain-containing protein YP_001312396.1 87250 D 366394 CDS YP_001312397.1 150375801 5318398 88071..89480 1 NC_009620.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rle:RL3184 putative chromate transport protein; chromate transporter 89480 5318398 Smed_3651 Sinorhizobium medicae WSM419 chromate transporter YP_001312397.1 88071 D 366394 CDS YP_001312398.1 150375802 5318399 complement(89709..90518) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bsu:BG10628 similar to glucose 1-dehydrogenase; short-chain dehydrogenase/reductase SDR 90518 5318399 Smed_3652 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312398.1 89709 R 366394 CDS YP_001312399.1 150375803 5318400 complement(90568..91407) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rxy:Rxyl_0938 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 91407 5318400 Smed_3653 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312399.1 90568 R 366394 CDS YP_001312400.1 150375804 5318401 91607..92611 1 NC_009620.1 PFAM: basic membrane lipoprotein; KEGG: rxy:Rxyl_0155 basic membrane lipoprotein; basic membrane lipoprotein 92611 5318401 Smed_3654 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001312400.1 91607 D 366394 CDS YP_001312401.1 150375805 5318669 92760..94289 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BG12350 simple sugar transport system ATP-binding protein; ABC transporter-like protein 94289 5318669 Smed_3655 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312401.1 92760 D 366394 CDS YP_001312402.1 150375806 5318670 94286..95383 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20126 putative sugar ABC transporter permease protein; inner-membrane translocator 95383 5318670 Smed_3656 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312402.1 94286 D 366394 CDS YP_001312403.1 150375807 5318671 95371..96318 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sma:SAV6654 putative sugar ABC transporter permease protein; inner-membrane translocator 96318 5318671 Smed_3657 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312403.1 95371 D 366394 CDS YP_001312404.1 150375808 5318672 96333..97337 1 NC_009620.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bcl:ABC3205 inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 97337 5318672 Smed_3658 Sinorhizobium medicae WSM419 inosine/uridine-preferring nucleoside hydrolase YP_001312404.1 96333 D 366394 CDS YP_001312405.1 150375809 5318673 97334..98275 1 NC_009620.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ppr:PBPRA2062 putstive inosine-uridine preferring nucleoside hydrolase family protein; inosine/uridine-preferring nucleoside hydrolase 98275 5318673 Smed_3659 Sinorhizobium medicae WSM419 inosine/uridine-preferring nucleoside hydrolase YP_001312405.1 97334 D 366394 CDS YP_001312406.1 150375810 5318674 98320..98961 1 NC_009620.1 PFAM: isochorismatase hydrolase; KEGG: chy:CHY_0679 isochorismatase family protein; isochorismatase hydrolase 98961 5318674 Smed_3660 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001312406.1 98320 D 366394 CDS YP_001312407.1 150375811 5318675 98966..99484 1 NC_009620.1 PFAM: regulatory protein MarR; KEGG: mag:amb1485 transcriptional regulator; MarR family transcriptional regulator 99484 5318675 Smed_3661 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001312407.1 98966 D 366394 CDS YP_001312408.1 150375812 5318676 99529..100113 1 NC_009620.1 PFAM: protein of unknown function DUF1185; KEGG: mlo:mll4877 hypothetical protein; hypothetical protein 100113 5318676 Smed_3662 Sinorhizobium medicae WSM419 hypothetical protein YP_001312408.1 99529 D 366394 CDS YP_001312409.1 150375813 5318677 complement(100349..102109) 1 NC_009620.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: mlo:mlr4788 N-methylhydantoinase B; 5-oxoprolinase 102109 5318677 Smed_3663 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001312409.1 100349 R 366394 CDS YP_001312410.1 150375814 5318678 complement(102106..104181) 1 NC_009620.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mlo:mlr4786 N-methylhydantoinase A (mikimopine-lactam hydrogenase); 5-oxoprolinase 104181 5318678 Smed_3664 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001312410.1 102106 R 366394 CDS YP_001312411.1 150375815 5318062 complement(104426..105604) 1 NC_009620.1 PFAM: peptidase M42 family protein; KEGG: sme:SMb20466 hypothetical glucanase protein; peptidase M42 family protein 105604 5318062 Smed_3665 Sinorhizobium medicae WSM419 peptidase M42 family protein YP_001312411.1 104426 R 366394 CDS YP_001312412.1 150375816 5318063 105757..106824 1 NC_009620.1 KEGG: sme:SMb20465 hypothetical protein; hypothetical protein 106824 5318063 Smed_3666 Sinorhizobium medicae WSM419 hypothetical protein YP_001312412.1 105757 D 366394 CDS YP_001312413.1 150375817 5318064 106996..107298 1 NC_009620.1 KEGG: sme:SMb20464 hypothetical protein; hypothetical protein 107298 5318064 Smed_3667 Sinorhizobium medicae WSM419 hypothetical protein YP_001312413.1 106996 D 366394 CDS YP_001312414.1 150375818 5318065 complement(107432..107941) 1 NC_009620.1 PFAM: protein of unknown function DUF995; KEGG: sme:SMb20463 hypothetical protein; hypothetical protein 107941 5318065 Smed_3668 Sinorhizobium medicae WSM419 hypothetical protein YP_001312414.1 107432 R 366394 CDS YP_001312415.1 150375819 5318066 complement(107941..108918) 1 NC_009620.1 KEGG: sme:SMb20462 putative cellulase H precursor protein; putative cellulase H protein 108918 5318066 Smed_3669 Sinorhizobium medicae WSM419 putative cellulase H protein YP_001312415.1 107941 R 366394 CDS YP_001312416.1 150375820 5318067 complement(108915..109529) 1 NC_009620.1 PFAM: protein of unknown function DUF995; KEGG: sme:SMb20461 hypothetical protein; hypothetical protein 109529 5318067 Smed_3670 Sinorhizobium medicae WSM419 hypothetical protein YP_001312416.1 108915 R 366394 CDS YP_001312417.1 150375821 5318068 complement(109534..111390) 1 NC_009620.1 KEGG: sme:SMb20460 putative cellulose synthase protein; putative cellulose synthase 111390 5318068 Smed_3671 Sinorhizobium medicae WSM419 putative cellulose synthase YP_001312417.1 109534 R 366394 CDS YP_001312418.1 150375822 5318069 complement(111387..112373) 1 NC_009620.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb20459 putative UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 112373 5318069 Smed_3672 Sinorhizobium medicae WSM419 UDP-glucose 4-epimerase YP_001312418.1 111387 R 366394 CDS YP_001312419.1 150375823 5318070 complement(112373..113419) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: sme:SMb20458 putative dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase 113419 5318070 Smed_3673 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312419.1 112373 R 366394 CDS YP_001312420.1 150375824 5318781 113778..114926 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMb20457 putative transcriptional regulator transcription regulator protein; helix-turn-helix domain-containing protein 114926 5318781 Smed_3674 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312420.1 113778 D 366394 CDS YP_001312421.1 150375825 5318782 complement(114969..115715) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20456 putative dehydrogenasereductase protein; short-chain dehydrogenase/reductase SDR 115715 5318782 Smed_3675 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312421.1 114969 R 366394 CDS YP_001312422.1 150375826 5318783 115816..116439 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sme:SMb20455 putative transcriptional regulator protein; TetR family transcriptional regulator 116439 5318783 Smed_3676 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001312422.1 115816 D 366394 CDS YP_001312423.1 150375827 5318784 complement(116553..116972) 1 NC_009620.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMb20454 hypothetical protein; hypothetical protein 116972 5318784 Smed_3677 Sinorhizobium medicae WSM419 hypothetical protein YP_001312423.1 116553 R 366394 CDS YP_001312424.1 150375828 5318785 complement(117174..117527) 1 NC_009620.1 KEGG: sme:SMb20452 hypothetical protein; hypothetical protein 117527 5318785 Smed_3678 Sinorhizobium medicae WSM419 hypothetical protein YP_001312424.1 117174 R 366394 CDS YP_001312425.1 150375829 5318786 complement(117527..118084) 1 NC_009620.1 KEGG: sme:SMb20451 hypothetical protein; hypothetical protein 118084 5318786 Smed_3679 Sinorhizobium medicae WSM419 hypothetical protein YP_001312425.1 117527 R 366394 CDS YP_001312426.1 150375830 5318787 complement(118089..120449) 1 NC_009620.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sme:SMb20450 putative regulatory protein; stage II sporulation E family protein 120449 5318787 Smed_3680 Sinorhizobium medicae WSM419 stage II sporulation E family protein YP_001312426.1 118089 R 366394 CDS YP_001312427.1 150375831 5318788 complement(120446..121624) 1 NC_009620.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb20449 putative methyltransferase protein; type 11 methyltransferase 121624 5318788 Smed_3681 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001312427.1 120446 R 366394 CDS YP_001312428.1 150375832 5318789 complement(121621..122139) 1 NC_009620.1 KEGG: sme:SMb20448 hypothetical protein; hypothetical protein 122139 5318789 Smed_3682 Sinorhizobium medicae WSM419 hypothetical protein YP_001312428.1 121621 R 366394 CDS YP_001312429.1 150375833 5318790 complement(122210..123904) 1 NC_009620.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sme:SMb20447 hypothetical protein; diguanylate cyclase/phosphodiesterase 123904 5318790 Smed_3683 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001312429.1 122210 R 366394 CDS YP_001312430.1 150375834 5318802 complement(124140..125348) 1 NC_009620.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 125348 5318802 Smed_3684 Sinorhizobium medicae WSM419 mannonate dehydratase YP_001312430.1 124140 R 366394 CDS YP_001312431.1 150375835 5318803 complement(125358..126401) 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20445 putative alcohol dehydrogenase protein; alcohol dehydrogenase 126401 5318803 Smed_3685 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312431.1 125358 R 366394 CDS YP_001312432.1 150375836 5318804 complement(126416..127822) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20444 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 127822 5318804 Smed_3686 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001312432.1 126416 R 366394 CDS YP_001312433.1 150375837 5318805 complement(127828..128415) 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20443 putative permease protein; tripartite ATP-independent periplasmic transporter DctQ 128415 5318805 Smed_3687 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001312433.1 127828 R 366394 CDS YP_001312434.1 150375838 5318806 complement(128469..129443) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20442 putative periplasmic solute-binding protein; TRAP dicarboxylate transporter subunit DctP 129443 5318806 Smed_3688 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001312434.1 128469 R 366394 CDS YP_001312435.1 150375839 5318807 complement(129479..130222) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20441 putative transcriptional regulator protein; GntR family transcriptional regulator 130222 5318807 Smed_3689 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312435.1 129479 R 366394 CDS YP_001312436.1 150375840 5318808 complement(130528..131802) 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20436 putative nitrate transporter protein; major facilitator transporter 131802 5318808 Smed_3690 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312436.1 130528 R 366394 CDS YP_001312437.1 150375841 5318809 132330..133301 1 NC_009620.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 133301 5318809 Smed_3691 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001312437.1 132330 D 366394 CDS YP_001312438.1 150375842 5318810 complement(133392..134396) 1 NC_009620.1 TIGRFAM: Ectoine utilization protein EutE; PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sme:SMb20435 hypothetical protein; ectoine utilization protein EutE 134396 5318810 Smed_3692 Sinorhizobium medicae WSM419 ectoine utilization protein EutE YP_001312438.1 133392 R 366394 CDS YP_001312439.1 150375843 5318302 complement(134401..135582) 1 NC_009620.1 TIGRFAM: Ectoine utilization protein EutD; PFAM: creatinase; peptidase M24; KEGG: sme:SMb20434 putative hydrolasepeptidase protein; ectoine utilization protein EutD 135582 5318302 Smed_3693 Sinorhizobium medicae WSM419 ectoine utilization protein EutD YP_001312439.1 134401 R 366394 CDS YP_001312440.1 150375844 5318303 complement(135628..136617) 1 NC_009620.1 putative cyclodeaminase; ectoine utilization protein EutC 136617 5318303 Smed_3694 Sinorhizobium medicae WSM419 ectoine utilization protein EutC YP_001312440.1 135628 R 366394 CDS YP_001312441.1 150375845 5318304 complement(136614..137618) 1 NC_009620.1 catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization; threonine dehydratase 137618 eutB 5318304 eutB Sinorhizobium medicae WSM419 threonine dehydratase YP_001312441.1 136614 R 366394 CDS YP_001312442.1 150375846 5318305 complement(137615..138400) 1 NC_009620.1 TIGRFAM: Ectoine utilization protein EutA; PFAM: Asp/Glu racemase; KEGG: sme:SMb20431 hypothetical arylmalonate decarboxylase protein; ectoine utilization protein EutA 138400 5318305 Smed_3696 Sinorhizobium medicae WSM419 ectoine utilization protein EutA YP_001312442.1 137615 R 366394 CDS YP_001312443.1 150375847 5318306 complement(138400..139062) 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; Ectoine/hydroxyectoine ABC transporter permease protein EhuD; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20430 putative amino acid ABC transporter permease protein; ectoine/hydroxyectoine ABC transporter permease EhuD 139062 5318306 Smed_3697 Sinorhizobium medicae WSM419 ectoine/hydroxyectoine ABC transporter permease EhuD YP_001312443.1 138400 R 366394 CDS YP_001312444.1 150375848 5318307 complement(139065..139784) 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; Ectoine/hydroxyectoine ABC transporter permease protein EhuC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20429 putative amino acid ABC transporter permease protein; ectoine/hydroxyectoine ABC transporter permease EhuC 139784 5318307 Smed_3698 Sinorhizobium medicae WSM419 ectoine/hydroxyectoine ABC transporter permease EhuC YP_001312444.1 139065 R 366394 CDS YP_001312445.1 150375849 5318308 complement(139828..140679) 1 NC_009620.1 TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb20428 putative ABC transporter amino acid-binding protein; ectoine/hydroxyectoine ABC transporter solute-binding protein 140679 5318308 Smed_3699 Sinorhizobium medicae WSM419 ectoine/hydroxyectoine ABC transporter solute-binding protein YP_001312445.1 139828 R 366394 CDS YP_001312446.1 150375850 5318309 complement(140738..141523) 1 NC_009620.1 TIGRFAM: Ectoine/hydroxyectoine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20427 putative amino acid ABC transporter ATP-binding protein; ectoine/hydroxyectoine ABC transporter ATP-binding protein 141523 5318309 Smed_3700 Sinorhizobium medicae WSM419 ectoine/hydroxyectoine ABC transporter ATP-binding protein YP_001312446.1 140738 R 366394 CDS YP_001312447.1 150375851 5318310 complement(141684..143120) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMb20426 hypothetical transcriptional regulator protein; GntR family transcriptional regulator 143120 5318310 Smed_3701 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312447.1 141684 R 366394 CDS YP_001312448.1 150375852 5318311 143174..143827 1 NC_009620.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMb20425 putative transcriptional regulator protein; AsnC family transcriptional regulator 143827 5318311 Smed_3702 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001312448.1 143174 D 366394 CDS YP_001312449.1 150375853 5318423 143824..145320 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20424 putative succinate-semialdehyde dehydrogenase protein; aldehyde dehydrogenase 145320 5318423 Smed_3703 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001312449.1 143824 D 366394 CDS YP_001312450.1 150375854 5318424 145403..146779 1 NC_009620.1 PFAM: aminotransferase class-III; KEGG: sme:SMb20423 hypothetical protein; hypothetical protein 146779 5318424 Smed_3704 Sinorhizobium medicae WSM419 hypothetical protein YP_001312450.1 145403 D 366394 CDS YP_001312451.1 150375855 5318425 146791..147864 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20422 putative oxidoreductase protein; alcohol dehydrogenase 147864 5318425 Smed_3705 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312451.1 146791 D 366394 CDS YP_001312452.1 150375856 5318426 complement(147916..148548) 1 NC_009620.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMb20420 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 148548 5318426 Smed_3706 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001312452.1 147916 R 366394 CDS YP_001312453.1 150375857 5318427 complement(148673..149722) 1 NC_009620.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 149722 ugpC 5318427 ugpC Sinorhizobium medicae WSM419 glycerol-3-phosphate transporter ATP-binding subunit YP_001312453.1 148673 R 366394 CDS YP_001312454.1 150375858 5318428 complement(149722..150570) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20418 probable glycerol-3-phosphate ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 150570 5318428 Smed_3708 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312454.1 149722 R 366394 CDS YP_001312455.1 150375859 5318429 complement(150579..151460) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20417 probable glycerol-3-phosphate ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 151460 5318429 Smed_3709 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312455.1 150579 R 366394 CDS YP_001312456.1 150375860 5318430 complement(151577..152872) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20416 probable ABC transporter periplasmic glycerol-3-phosphate-binding protein precursor; extracellular solute-binding protein 152872 5318430 Smed_3710 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312456.1 151577 R 366394 CDS YP_001312457.1 150375861 5318431 153238..154527 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb20415 putative oxidoreductase protein; NAD-dependent epimerase/dehydratase 154527 5318431 Smed_3711 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312457.1 153238 D 366394 CDS YP_001312458.1 150375862 5318525 154527..155000 1 NC_009620.1 KEGG: sme:SMb20414 hypothetical protein; hypothetical protein 155000 5318525 Smed_3712 Sinorhizobium medicae WSM419 hypothetical protein YP_001312458.1 154527 D 366394 CDS YP_001312459.1 150375863 5318526 complement(155064..156074) 1 NC_009620.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMb20410 putative glycine-betaine-binding protein; glycine betaine ABC transporter substrate-binding protein 156074 5318526 Smed_3713 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001312459.1 155064 R 366394 CDS YP_001312460.1 150375864 5318527 complement(156071..156901) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20409 putative hydroxybutyrate dehydrogenase protein; short-chain dehydrogenase/reductase SDR 156901 5318527 Smed_3714 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312460.1 156071 R 366394 CDS YP_001312461.1 150375865 5318528 complement(156898..157395) 1 NC_009620.1 PFAM: Acetone carboxylase gamma subunit; KEGG: sme:SMb20408 hypothetical protein; acetone carboxylase subunit gamma 157395 5318528 Smed_3715 Sinorhizobium medicae WSM419 acetone carboxylase subunit gamma YP_001312461.1 156898 R 366394 CDS YP_001312462.1 150375866 5318529 complement(157399..159591) 1 NC_009620.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: sme:SMb20407 putative N-methylhydantoinase, hydantoin utiliztion protein; hydantoinase B/oxoprolinase 159591 5318529 Smed_3716 Sinorhizobium medicae WSM419 hydantoinase B/oxoprolinase YP_001312462.1 157399 R 366394 CDS YP_001312463.1 150375867 5318530 complement(159609..161738) 1 NC_009620.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: sme:SMb20406 putative hydantoin utilization protein A; 5-oxoprolinase 161738 5318530 Smed_3717 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001312463.1 159609 R 366394 CDS YP_001312464.1 150375868 5318531 161836..162630 1 NC_009620.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: sme:SMb20405 putative transcriptional regulator protein; response regulator receiver protein 162630 5318531 Smed_3718 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001312464.1 161836 D 366394 CDS YP_001312465.1 150375869 5318532 162732..162905 1 NC_009620.1 KEGG: sme:SMb20401 hypothetical protein; hypothetical protein 162905 5318532 Smed_3719 Sinorhizobium medicae WSM419 hypothetical protein YP_001312465.1 162732 D 366394 CDS YP_001312466.1 150375870 5318533 complement(163022..163951) 1 NC_009620.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 163951 5318533 Smed_3720 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001312466.1 163022 R 366394 CDS YP_001312467.1 150375871 5318534 164204..164467 1 NC_009620.1 KEGG: sme:SMb20400 hypothetical protein; hypothetical protein 164467 5318534 Smed_3721 Sinorhizobium medicae WSM419 hypothetical protein YP_001312467.1 164204 D 366394 CDS YP_001312468.1 150375872 5318588 complement(164489..165064) 1 NC_009620.1 KEGG: sme:SMb20399 hypothetical protein; hypothetical protein 165064 5318588 Smed_3722 Sinorhizobium medicae WSM419 hypothetical protein YP_001312468.1 164489 R 366394 CDS YP_001312469.1 150375873 5318589 complement(165169..165705) 1 NC_009620.1 PFAM: metallophosphoesterase; KEGG: sme:SMb20398 hypothetical protein; metallophosphoesterase 165705 5318589 Smed_3723 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001312469.1 165169 R 366394 CDS YP_001312470.1 150375874 5318590 complement(165777..167033) 1 NC_009620.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: sme:SMb20393 putative ribulose bisphosphate carboxylaseoxygenase, large subunit protein; RuBisCO-like protein 167033 5318590 Smed_3724 Sinorhizobium medicae WSM419 RuBisCO-like protein YP_001312470.1 165777 R 366394 CDS YP_001312471.1 150375875 5318591 167170..167883 1 NC_009620.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR 167883 5318591 Smed_3725 Sinorhizobium medicae WSM419 transcriptional regulator NanR YP_001312471.1 167170 D 366394 CDS YP_001312472.1 150375876 5318592 complement(167954..169948) 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20391 putative cellulose synthase catalytic subunit protein; cellulose synthase 169948 5318592 Smed_3726 Sinorhizobium medicae WSM419 cellulose synthase YP_001312472.1 167954 R 366394 CDS YP_001312473.1 150375877 5318593 complement(169930..171162) 1 NC_009620.1 KEGG: sme:SMb20390 hypothetical protein; hypothetical protein 171162 5318593 Smed_3727 Sinorhizobium medicae WSM419 hypothetical protein YP_001312473.1 169930 R 366394 CDS YP_001312474.1 150375878 5318594 171511..172536 1 NC_009620.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sme:SMb20389 hypothetical protein; diguanylate cyclase 172536 5318594 Smed_3728 Sinorhizobium medicae WSM419 diguanylate cyclase YP_001312474.1 171511 D 366394 CDS YP_001312475.1 150375879 5318595 172560..173549 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20388 putative NADPH:quinone oxidoreductase protein; alcohol dehydrogenase 173549 5318595 Smed_3729 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312475.1 172560 D 366394 CDS YP_001312476.1 150375880 5318596 173839..174558 1 NC_009620.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb20387 putative transcriptional regulator protein; regulatory protein IclR 174558 5318596 Smed_3730 Sinorhizobium medicae WSM419 regulatory protein IclR YP_001312476.1 173839 D 366394 CDS YP_001312477.1 150375881 5318597 174560..176296 1 NC_009620.1 KEGG: sme:SMb20386 hypothetical protein; hypothetical protein 176296 5318597 Smed_3731 Sinorhizobium medicae WSM419 hypothetical protein YP_001312477.1 174560 D 366394 CDS YP_001312478.1 150375882 5318660 176293..177021 1 NC_009620.1 KEGG: sme:SMb20385 hypothetical protein; hypothetical protein 177021 5318660 Smed_3732 Sinorhizobium medicae WSM419 hypothetical protein YP_001312478.1 176293 D 366394 CDS YP_001312479.1 150375883 5318661 177034..178005 1 NC_009620.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sme:SMb20384 putative dipeptidase protein; membrane dipeptidase 178005 5318661 Smed_3733 Sinorhizobium medicae WSM419 membrane dipeptidase YP_001312479.1 177034 D 366394 CDS YP_001312480.1 150375884 5318662 178111..179184 1 NC_009620.1 KEGG: sme:SMb20383 putative ABC transporter periplasmic solute-binding protein; putative ABC transporter periplasmic solute-binding protein 179184 5318662 Smed_3734 Sinorhizobium medicae WSM419 putative ABC transporter periplasmic solute-binding protein YP_001312480.1 178111 D 366394 CDS YP_001312481.1 150375885 5318663 179310..180161 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20382 putative ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 180161 5318663 Smed_3735 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312481.1 179310 D 366394 CDS YP_001312482.1 150375886 5318664 180158..180988 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20381 putative ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 180988 5318664 Smed_3736 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312482.1 180158 D 366394 CDS YP_001312483.1 150375887 5318665 181004..182053 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20380 putative ABC transporter ATP-binding protein; ABC transporter-like protein 182053 5318665 Smed_3737 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312483.1 181004 D 366394 CDS YP_001312484.1 150375888 5318666 182084..183469 1 NC_009620.1 PFAM: aminotransferase class-III; KEGG: sme:SMb20379 hypothetical protein; aminotransferase 183469 5318666 Smed_3738 Sinorhizobium medicae WSM419 aminotransferase YP_001312484.1 182084 D 366394 CDS YP_001312485.1 150375889 5318667 183480..184943 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20378 putative aldehyde dehydrogenase protein; aldehyde dehydrogenase 184943 5318667 Smed_3739 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001312485.1 183480 D 366394 CDS YP_001312486.1 150375890 5318668 184977..185360 1 NC_009620.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMb20377 putative translation initiation inhibitor protein; endoribonuclease L-PSP 185360 5318668 Smed_3740 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001312486.1 184977 D 366394 CDS YP_001312487.1 150375891 5318731 185404..185784 1 NC_009620.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMb20376 hypothetical protein; endoribonuclease L-PSP 185784 5318731 Smed_3741 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001312487.1 185404 D 366394 CDS YP_001312488.1 150375892 5318732 186060..186869 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20375 putative transcriptional regulator protein; GntR domain-containing protein 186869 5318732 Smed_3742 Sinorhizobium medicae WSM419 GntR domain-containing protein YP_001312488.1 186060 D 366394 CDS YP_001312489.1 150375893 5318733 186893..187885 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20374 putative periplasmic substrate-binding protein; TRAP dicarboxylate transporter subunit DctP 187885 5318733 Smed_3743 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001312489.1 186893 D 366394 CDS YP_001312490.1 150375894 5318734 187964..188431 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20373 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 188431 5318734 Smed_3744 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001312490.1 187964 D 366394 CDS YP_001312491.1 150375895 5318735 188444..189721 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20372 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 189721 5318735 Smed_3745 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001312491.1 188444 D 366394 CDS YP_001312492.1 150375896 5318736 189745..190191 1 NC_009620.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 190191 5318736 Smed_3746 Sinorhizobium medicae WSM419 ribose-5-phosphate isomerase B YP_001312492.1 189745 D 366394 CDS YP_001312493.1 150375897 5318737 complement(190227..190907) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20370 putative ATP-binding transport protein; ABC transporter-like protein 190907 5318737 Smed_3747 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312493.1 190227 R 366394 CDS YP_001312494.1 150375898 5318738 complement(190904..192154) 1 NC_009620.1 PFAM: protein of unknown function DUF214; KEGG: sme:SMb20369 conserved hypothetical protein; hypothetical protein 192154 5318738 Smed_3748 Sinorhizobium medicae WSM419 hypothetical protein YP_001312494.1 190904 R 366394 CDS YP_001312495.1 150375899 5318739 complement(192151..193173) 1 NC_009620.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sme:SMb20368 hypothetical protein; RND family efflux transporter MFP subunit 193173 5318739 Smed_3749 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001312495.1 192151 R 366394 CDS YP_001312496.1 150375900 5318740 193310..194002 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sme:SMb20367 putative transcriptional regulator protein; TetR family transcriptional regulator 194002 5318740 Smed_3750 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001312496.1 193310 D 366394 CDS YP_001312497.1 150375901 5318741 complement(194520..195527) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20366 putative transcriptional regulator protein; periplasmic binding protein/LacI transcriptional regulator 195527 5318741 Smed_3751 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312497.1 194520 R 366394 CDS YP_001312498.1 150375902 5318742 195709..196737 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20365 putative ABC transporter iron-binding protein; extracellular solute-binding protein 196737 5318742 Smed_3752 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312498.1 195709 D 366394 CDS YP_001312499.1 150375903 5318743 196915..199143 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20364 putative iron ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 199143 5318743 Smed_3753 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312499.1 196915 D 366394 CDS YP_001312500.1 150375904 5318744 199140..200201 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20363 putative iron ABC transporter ATP-binding protein; ABC transporter-like protein 200201 5318744 Smed_3754 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312500.1 199140 D 366394 CDS YP_001312501.1 150375905 5318745 200255..201055 1 NC_009620.1 PFAM: inositol monophosphatase; KEGG: sme:SMb20362 putative inositol monophosphatase protein; inositol-phosphate phosphatase 201055 5318745 Smed_3755 Sinorhizobium medicae WSM419 inositol-phosphate phosphatase YP_001312501.1 200255 D 366394 CDS YP_001312502.1 150375906 5318746 201391..201615 1 NC_009620.1 hypothetical protein 201615 5318746 Smed_3756 Sinorhizobium medicae WSM419 hypothetical protein YP_001312502.1 201391 D 366394 CDS YP_001312503.1 150375907 5318747 201637..201837 1 NC_009620.1 KEGG: rpb:RPB_4397 transport system permease protein; hypothetical protein 201837 5318747 Smed_3757 Sinorhizobium medicae WSM419 hypothetical protein YP_001312503.1 201637 D 366394 CDS YP_001312504.1 150375908 5318748 202007..202906 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_3006 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 202906 5318748 Smed_3758 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312504.1 202007 D 366394 CDS YP_001312505.1 150375909 5318749 202969..203766 1 NC_009620.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sme:SMb20361 putative ionic voltage-gated channel protein; Ion transport 2 domain-containing protein 203766 5318749 Smed_3759 Sinorhizobium medicae WSM419 Ion transport 2 domain-containing protein YP_001312505.1 202969 D 366394 CDS YP_001312506.1 150375910 5319052 complement(203807..204595) 1 NC_009620.1 KEGG: sme:SMb20360 hypothetical protein; hypothetical protein 204595 5319052 Smed_3760 Sinorhizobium medicae WSM419 hypothetical protein YP_001312506.1 203807 R 366394 CDS YP_001312507.1 150375911 5319053 complement(204582..205883) 1 NC_009620.1 KEGG: sme:SMb20359 hypothetical protein; hypothetical protein 205883 5319053 Smed_3761 Sinorhizobium medicae WSM419 hypothetical protein YP_001312507.1 204582 R 366394 CDS YP_001312508.1 150375912 5319054 complement(206007..207569) 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; histidine kinase A domain protein; KEGG: sme:SMb20358 putative regulatory protein; putative adenylate/guanylate cyclase 207569 5319054 Smed_3762 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001312508.1 206007 R 366394 CDS YP_001312509.1 150375913 5319055 complement(207577..207942) 1 NC_009620.1 PFAM: response regulator receiver; KEGG: sme:SMb20357 putative histidine kinase protein; response regulator receiver protein 207942 5319055 Smed_3763 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001312509.1 207577 R 366394 CDS YP_001312510.1 150375914 5319056 complement(207968..210721) 1 NC_009620.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMb20356 putative sensory histidine kinase protein; multi-sensor hybrid histidine kinase 210721 5319056 Smed_3764 Sinorhizobium medicae WSM419 multi-sensor hybrid histidine kinase YP_001312510.1 207968 R 366394 CDS YP_001312511.1 150375915 5319057 complement(210718..211476) 1 NC_009620.1 KEGG: sme:SMb20355 hypothetical protein; hypothetical protein 211476 5319057 Smed_3765 Sinorhizobium medicae WSM419 hypothetical protein YP_001312511.1 210718 R 366394 CDS YP_001312512.1 150375916 5319058 complement(211541..212599) 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb20353 putative oxidoreductase protein; oxidoreductase domain-containing protein 212599 5319058 Smed_3766 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001312512.1 211541 R 366394 CDS YP_001312513.1 150375917 5319059 complement(212604..213668) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20352 probable sugar ABC transporter permease protein; monosaccharide-transporting ATPase 213668 5319059 Smed_3767 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312513.1 212604 R 366394 CDS YP_001312514.1 150375918 5319060 complement(213668..215212) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20351 probable sugar ABC transporter ATP-binding protein; ABC transporter-like protein 215212 5319060 Smed_3768 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312514.1 213668 R 366394 CDS YP_001312515.1 150375919 5319061 complement(215215..215859) 1 NC_009620.1 KEGG: sme:SMb20350 hypothetical protein; hypothetical protein 215859 5319061 Smed_3769 Sinorhizobium medicae WSM419 hypothetical protein YP_001312515.1 215215 R 366394 CDS YP_001312516.1 150375920 5318218 complement(215969..216910) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20349 probable ABC transporter sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 216910 5318218 Smed_3770 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312516.1 215969 R 366394 CDS YP_001312517.1 150375921 5318219 complement(216978..217802) 1 NC_009620.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: sme:SMb20348 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 217802 5318219 Smed_3771 Sinorhizobium medicae WSM419 coenzyme F420-dependent NADP oxidoreductase YP_001312517.1 216978 R 366394 CDS YP_001312518.1 150375922 5318220 217969..218574 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sme:SMb20347 putative transcriptional regulator protein; TetR family transcriptional regulator 218574 5318220 Smed_3772 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001312518.1 217969 D 366394 CDS YP_001312519.1 150375923 5318221 218670..219824 1 NC_009620.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMb20346 putative efflux protein; RND family efflux transporter MFP subunit 219824 5318221 Smed_3773 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001312519.1 218670 D 366394 CDS YP_001312520.1 150375924 5318222 219853..223005 1 NC_009620.1 PFAM: acriflavin resistance protein; KEGG: sme:SMb20345 putative efflux protein; acriflavin resistance protein 223005 5318222 Smed_3774 Sinorhizobium medicae WSM419 acriflavin resistance protein YP_001312520.1 219853 D 366394 CDS YP_001312521.1 150375925 5318223 223134..224090 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: sme:SMb20344 putative transcriptional regulator protein; AraC-like transcriptional regulator 224090 5318223 Smed_3775 Sinorhizobium medicae WSM419 AraC-like transcriptional regulator YP_001312521.1 223134 D 366394 CDS YP_001312522.1 150375926 5318224 224382..224840 1 NC_009620.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMb20343 isoquinoline 1-oxidoreductase, alpha ubunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 224840 5318224 Smed_3776 Sinorhizobium medicae WSM419 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001312522.1 224382 D 366394 CDS YP_001312523.1 150375927 5318225 224842..227052 1 NC_009620.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb20342 putative soquinoline 1-oxidoreductase beta subunit; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 227052 5318225 Smed_3777 Sinorhizobium medicae WSM419 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001312523.1 224842 D 366394 CDS YP_001312524.1 150375928 5318226 complement(227606..227779) 1 NC_009620.1 KEGG: sme:SMb20341 hypothetical protein; hypothetical protein 227779 5318226 Smed_3778 Sinorhizobium medicae WSM419 hypothetical protein YP_001312524.1 227606 R 366394 CDS YP_001312525.1 150375929 5318227 complement(227812..228009) 1 NC_009620.1 hypothetical protein 228009 5318227 Smed_3779 Sinorhizobium medicae WSM419 hypothetical protein YP_001312525.1 227812 R 366394 CDS YP_001312526.1 150375930 5317948 complement(228020..228199) 1 NC_009620.1 KEGG: sme:SMb20340 hypothetical protein; hypothetical protein 228199 5317948 Smed_3780 Sinorhizobium medicae WSM419 hypothetical protein YP_001312526.1 228020 R 366394 CDS YP_001312527.1 150375931 5317949 complement(228249..228740) 1 NC_009620.1 KEGG: sme:SMb20339 hypothetical protein; hypothetical protein 228740 5317949 Smed_3781 Sinorhizobium medicae WSM419 hypothetical protein YP_001312527.1 228249 R 366394 CDS YP_001312528.1 150375932 5317950 complement(228829..230046) 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20338 putative efflux protein; major facilitator transporter 230046 5317950 Smed_3782 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312528.1 228829 R 366394 CDS YP_001312529.1 150375933 5317951 230160..230753 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sme:SMb20337 putative transcriptional regulator protein; TetR family transcriptional regulator 230753 5317951 Smed_3783 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001312529.1 230160 D 366394 CDS YP_001312530.1 150375934 5317952 complement(230840..231637) 1 NC_009620.1 KEGG: sme:SMb20336 hypothetical protein; hypothetical protein 231637 5317952 Smed_3784 Sinorhizobium medicae WSM419 hypothetical protein YP_001312530.1 230840 R 366394 CDS YP_001312531.1 150375935 5317953 complement(231748..233016) 1 NC_009620.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: sme:SMb20335 hypothetical protein; hypothetical protein 233016 5317953 Smed_3785 Sinorhizobium medicae WSM419 hypothetical protein YP_001312531.1 231748 R 366394 CDS YP_001312532.1 150375936 5317954 complement(233292..235013) 1 NC_009620.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: sit:TM1040_3285 outer membrane autotransporter barrel; outer membrane autotransporter 235013 5317954 Smed_3786 Sinorhizobium medicae WSM419 outer membrane autotransporter YP_001312532.1 233292 R 366394 CDS YP_001312533.1 150375937 5317955 complement(235031..235990) 1 NC_009620.1 PFAM: protein of unknown function DUF323; KEGG: sme:SMb20334 hypothetical protein; hypothetical protein 235990 5317955 Smed_3787 Sinorhizobium medicae WSM419 hypothetical protein YP_001312533.1 235031 R 366394 CDS YP_001312534.1 150375938 5317956 complement(236230..237210) 1 NC_009620.1 KEGG: rle:RL2862 hypothetical protein; hypothetical protein 237210 5317956 Smed_3788 Sinorhizobium medicae WSM419 hypothetical protein YP_001312534.1 236230 R 366394 CDS YP_001312535.1 150375939 5317990 complement(237229..238608) 1 NC_009620.1 KEGG: sme:SMa0690 hypothetical protein; hypothetical protein 238608 5317990 Smed_3789 Sinorhizobium medicae WSM419 hypothetical protein YP_001312535.1 237229 R 366394 CDS YP_001312536.1 150375940 5317991 complement(238766..239635) 1 NC_009620.1 KEGG: rle:pRL110217 hypothetical protein; hypothetical protein 239635 5317991 Smed_3790 Sinorhizobium medicae WSM419 hypothetical protein YP_001312536.1 238766 R 366394 CDS YP_001312537.1 150375941 5317992 239958..241604 1 NC_009620.1 PFAM: sulfatase; KEGG: rba:RB3877 aryl-sulfate sulphohydrolase; sulfatase 241604 5317992 Smed_3791 Sinorhizobium medicae WSM419 sulfatase YP_001312537.1 239958 D 366394 CDS YP_001312538.1 150375942 5317993 241865..242869 1 NC_009620.1 KEGG: bja:bll4740 nonspecific acid phosphatase precursor; nonspecific acid phosphatase 242869 5317993 Smed_3792 Sinorhizobium medicae WSM419 nonspecific acid phosphatase YP_001312538.1 241865 D 366394 CDS YP_001312539.1 150375943 5317994 complement(242993..243394) 1 NC_009620.1 PFAM: response regulator receiver; KEGG: bch:Bcen2424_3199 two component transcriptional regulator, LuxR family; response regulator receiver protein 243394 5317994 Smed_3793 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001312539.1 242993 R 366394 CDS YP_001312540.1 150375944 5317995 complement(243421..244068) 1 NC_009620.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bja:blr4774 two-component response regulator; response regulator receiver protein 244068 5317995 Smed_3794 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001312540.1 243421 R 366394 CDS YP_001312541.1 150375945 5317996 complement(244078..245910) 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMa0939 probable sensor histidine kinase of two-component system; histidine kinase 245910 5317996 Smed_3795 Sinorhizobium medicae WSM419 histidine kinase YP_001312541.1 244078 R 366394 CDS YP_001312542.1 150375946 5317997 246187..247404 1 NC_009620.1 KEGG: rle:RL1907 putative transmembrane protein; putative transmembrane protein 247404 5317997 Smed_3796 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001312542.1 246187 D 366394 CDS YP_001312543.1 150375947 5317998 247552..248292 1 NC_009620.1 PFAM: YidE/YbjL duplication domain protein; KEGG: zmo:ZMO1681 aspartate:alanine antiporter; YidE/YbjL domain-containing protein 248292 5317998 Smed_3797 Sinorhizobium medicae WSM419 YidE/YbjL domain-containing protein YP_001312543.1 247552 D 366394 CDS YP_001312544.1 150375948 5317999 248423..249394 1 NC_009620.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rle:RL1917 hypothetical protein; ATPase 249394 5317999 Smed_3798 Sinorhizobium medicae WSM419 ATPase YP_001312544.1 248423 D 366394 CDS YP_001312545.1 150375949 5318097 249410..250405 1 NC_009620.1 PFAM: protein of unknown function DUF58; KEGG: rle:RL1916 hypothetical protein; hypothetical protein 250405 5318097 Smed_3799 Sinorhizobium medicae WSM419 hypothetical protein YP_001312545.1 249410 D 366394 CDS YP_001312546.1 150375950 5318098 250406..250927 1 NC_009620.1 KEGG: reh:H16_A1606 hypothetical membrane associated protein; hypothetical protein 250927 5318098 Smed_3800 Sinorhizobium medicae WSM419 hypothetical protein YP_001312546.1 250406 D 366394 CDS YP_001312547.1 150375951 5318099 250914..251918 1 NC_009620.1 PFAM: von Willebrand factor type A; KEGG: reu:Reut_A2888 von Willebrand factor, type A; von Willebrand factor type A 251918 5318099 Smed_3801 Sinorhizobium medicae WSM419 von Willebrand factor type A YP_001312547.1 250914 D 366394 CDS YP_001312548.1 150375952 5318100 251915..253483 1 NC_009620.1 PFAM: von Willebrand factor type A; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rle:RL1913 putative transmembrane protein; hypothetical protein 253483 5318100 Smed_3802 Sinorhizobium medicae WSM419 hypothetical protein YP_001312548.1 251915 D 366394 CDS YP_001312549.1 150375953 5318101 253480..254823 1 NC_009620.1 KEGG: reh:H16_A1609 hypothetical membrane spanning protein; hypothetical protein 254823 5318101 Smed_3803 Sinorhizobium medicae WSM419 hypothetical protein YP_001312549.1 253480 D 366394 CDS YP_001312550.1 150375954 5318103 complement(257084..258742) 1 NC_009620.1 PFAM: sulfatase; KEGG: rba:RB9498 arylsulfatase; sulfatase 258742 5318103 Smed_3805 Sinorhizobium medicae WSM419 sulfatase YP_001312550.1 257084 R 366394 CDS YP_001312551.1 150375955 5318104 259169..259525 1 NC_009620.1 KEGG: sme:SMb20331 hypothetical protein; hypothetical protein 259525 5318104 Smed_3806 Sinorhizobium medicae WSM419 hypothetical protein YP_001312551.1 259169 D 366394 CDS YP_001312552.1 150375956 5318105 complement(259774..260856) 1 NC_009620.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMb20330 probable trehalosemaltose utilization protein, function; oxidoreductase domain-containing protein 260856 5318105 Smed_3807 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001312552.1 259774 R 366394 CDS YP_001312553.1 150375957 5318362 complement(260868..261761) 1 NC_009620.1 PFAM: protein of unknown function DUF1037; KEGG: sme:SMb20329 probable ThuA protein, function; hypothetical protein 261761 5318362 Smed_3808 Sinorhizobium medicae WSM419 hypothetical protein YP_001312553.1 260868 R 366394 CDS YP_001312554.1 150375958 5318363 complement(261990..263018) 1 NC_009620.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20328 probable trehalosemaltose transporter ATP-binding protein; ABC transporter-like protein 263018 5318363 Smed_3809 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312554.1 261990 R 366394 CDS YP_001312555.1 150375959 5318364 complement(263028..263858) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20327 probable trehalosemaltose transporter permease protein; binding-protein-dependent transport system inner membrane protein 263858 5318364 Smed_3810 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312555.1 263028 R 366394 CDS YP_001312556.1 150375960 5318365 complement(263858..264844) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20326 probable trehalosemaltose transporter permease protein; binding-protein-dependent transport system inner membrane protein 264844 5318365 Smed_3811 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312556.1 263858 R 366394 CDS YP_001312557.1 150375961 5318366 complement(264933..266204) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20325 probable trehalosemaltose-binding protein; extracellular solute-binding protein 266204 5318366 Smed_3812 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312557.1 264933 R 366394 CDS YP_001312558.1 150375962 5318367 266681..267703 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20324 putative ThuR, regulatory protein for trehalosemaltose transport system; alanine racemase 267703 5318367 Smed_3813 Sinorhizobium medicae WSM419 alanine racemase YP_001312558.1 266681 D 366394 CDS YP_001312559.1 150375963 5318368 complement(267768..268457) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20323 putative transcriptional regulator protein; GntR family transcriptional regulator 268457 5318368 Smed_3814 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312559.1 267768 R 366394 CDS YP_001312560.1 150375964 5318369 268546..269151 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20322 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 269151 5318369 Smed_3815 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001312560.1 268546 D 366394 CDS YP_001312561.1 150375965 5318370 269151..270416 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20321 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 270416 5318370 Smed_3816 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001312561.1 269151 D 366394 CDS YP_001312562.1 150375966 5318371 270446..271441 1 NC_009620.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20320 hypothetical protein; TRAP dicarboxylate transporter subunit DctP 271441 5318371 Smed_3817 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001312562.1 270446 D 366394 CDS YP_001312563.1 150375967 5318010 271574..272788 1 NC_009620.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMb20319 hypothetical protein; hypothetical protein 272788 5318010 Smed_3818 Sinorhizobium medicae WSM419 hypothetical protein YP_001312563.1 271574 D 366394 CDS YP_001312564.1 150375968 5318011 complement(272805..273833) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20318 putative sugar ABC transporter permease protein; monosaccharide-transporting ATPase 273833 5318011 Smed_3819 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312564.1 272805 R 366394 CDS YP_001312565.1 150375969 5318012 complement(273835..275421) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20317 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 275421 5318012 Smed_3820 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312565.1 273835 R 366394 CDS YP_001312566.1 150375970 5318013 complement(275504..276505) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20316 putative ABC transporter periplasmic sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator 276505 5318013 Smed_3821 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312566.1 275504 R 366394 CDS YP_001312567.1 150375971 5318014 complement(276586..277572) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20315 putative sugar ABC transporter permease protein; monosaccharide-transporting ATPase 277572 5318014 Smed_3822 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312567.1 276586 R 366394 CDS YP_001312568.1 150375972 5318015 277942..278934 1 NC_009620.1 PFAM: Dak kinase; KEGG: sme:SMb20314 putative dihydroxyacetone kinase protein; glycerone kinase 278934 5318015 Smed_3823 Sinorhizobium medicae WSM419 glycerone kinase YP_001312568.1 277942 D 366394 CDS YP_001312569.1 150375973 5318016 278944..279585 1 NC_009620.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: sme:SMb20313 putative dihydroxyacetone kinase protein; dihydroxyacetone kinase subunit DhaL 279585 5318016 Smed_3824 Sinorhizobium medicae WSM419 dihydroxyacetone kinase subunit DhaL YP_001312569.1 278944 D 366394 CDS YP_001312570.1 150375974 5318017 279700..281787 1 NC_009620.1 PFAM: Dak kinase; putative sugar-binding domain protein; KEGG: sme:SMb20312 putative transcriptional regulator protein; glycerone kinase 281787 5318017 Smed_3825 Sinorhizobium medicae WSM419 glycerone kinase YP_001312570.1 279700 D 366394 CDS YP_001312571.1 150375975 5318018 281893..282531 1 NC_009620.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: sme:SMb20307 putative dihydroxyacetone kinase protein; dihydroxyacetone kinase subunit DhaL 282531 5318018 Smed_3826 Sinorhizobium medicae WSM419 dihydroxyacetone kinase subunit DhaL YP_001312571.1 281893 D 366394 CDS YP_001312572.1 150375976 5318535 282781..284127 1 NC_009620.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase IS4 family protein 284127 5318535 Smed_3827 Sinorhizobium medicae WSM419 transposase IS4 family protein YP_001312572.1 282781 D 366394 CDS YP_001312573.1 150375977 5318536 complement(284177..284404) 1 NC_009620.1 KEGG: sme:SMb20303 hypothetical protein; hypothetical protein 284404 5318536 Smed_3828 Sinorhizobium medicae WSM419 hypothetical protein YP_001312573.1 284177 R 366394 CDS YP_001312574.1 150375978 5318537 complement(284665..285255) 1 NC_009620.1 KEGG: rle:RL0552 hypothetical protein; hypothetical protein 285255 5318537 Smed_3829 Sinorhizobium medicae WSM419 hypothetical protein YP_001312574.1 284665 R 366394 CDS YP_001312575.1 150375979 5318538 285419..285580 1 NC_009620.1 KEGG: sme:SMb20302 hypothetical protein; hypothetical protein 285580 5318538 Smed_3830 Sinorhizobium medicae WSM419 hypothetical protein YP_001312575.1 285419 D 366394 CDS YP_001312576.1 150375980 5318539 complement(285619..287550) 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: sme:SMb20300 putative adenylate cyclase protein; adenylyl cyclase class-3/4/guanylyl cyclase 287550 5318539 Smed_3831 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001312576.1 285619 R 366394 CDS YP_001312577.1 150375981 5318540 complement(287784..288692) 1 NC_009620.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 288692 5318540 Smed_3832 Sinorhizobium medicae WSM419 N-acetylneuraminate lyase YP_001312577.1 287784 R 366394 CDS YP_001312578.1 150375982 5318541 complement(288706..289641) 1 NC_009620.1 PFAM: dihydrodipicolinate synthetase; KEGG: sme:SMb20298 hypothetical protein; dihydrodipicolinate synthetase 289641 5318541 Smed_3833 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001312578.1 288706 R 366394 CDS YP_001312579.1 150375983 5318542 complement(289638..290918) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20297 putative permease protein; TRAP dicarboxylate transporter subunit DctM 290918 5318542 Smed_3834 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001312579.1 289638 R 366394 CDS YP_001312580.1 150375984 5318543 complement(290918..291436) 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20296 putative permease protein; tripartite ATP-independent periplasmic transporter DctQ 291436 5318543 Smed_3835 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001312580.1 290918 R 366394 CDS YP_001312581.1 150375985 5318544 complement(291530..292501) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20295 putative ABC transporter periplasmic substrate-binding protein; TRAP dicarboxylate transporter subunit DctP 292501 5318544 Smed_3836 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001312581.1 291530 R 366394 CDS YP_001312582.1 150375986 5318565 complement(292628..293329) 1 NC_009620.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR 293329 5318565 Smed_3837 Sinorhizobium medicae WSM419 transcriptional regulator NanR YP_001312582.1 292628 R 366394 CDS YP_001312583.1 150375987 5318566 complement(293484..294047) 1 NC_009620.1 KEGG: sme:SMb20293 hypothetical protein; hypothetical protein 294047 5318566 Smed_3838 Sinorhizobium medicae WSM419 hypothetical protein YP_001312583.1 293484 R 366394 CDS YP_001312584.1 150375988 5318567 294180..295163 1 NC_009620.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: sme:SMb20292 hypothetical immunogenic protein; TRAP transporter solute receptor TAXI family protein 295163 5318567 Smed_3839 Sinorhizobium medicae WSM419 TRAP transporter solute receptor TAXI family protein YP_001312584.1 294180 D 366394 CDS YP_001312585.1 150375989 5318568 295376..297889 1 NC_009620.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20291 hypothetical protein transmembrane; TRAP transporter, 4TM/12TM fusion protein 297889 5318568 Smed_3840 Sinorhizobium medicae WSM419 TRAP transporter, 4TM/12TM fusion protein YP_001312585.1 295376 D 366394 CDS YP_001312586.1 150375990 5318569 complement(297897..298895) 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20290 putative transcriptional regulator protein; regulatory protein LacI 298895 5318569 Smed_3841 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001312586.1 297897 R 366394 CDS YP_001312587.1 150375991 5318570 299046..300395 1 NC_009620.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sme:SMb20289 putative permease protein; xanthine/uracil/vitamin C permease 300395 5318570 Smed_3842 Sinorhizobium medicae WSM419 xanthine/uracil/vitamin C permease YP_001312587.1 299046 D 366394 CDS YP_001312588.1 150375992 5318571 300408..301808 1 NC_009620.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMb20288 hypothetical protein; amidohydrolase 301808 5318571 Smed_3843 Sinorhizobium medicae WSM419 amidohydrolase YP_001312588.1 300408 D 366394 CDS YP_001312589.1 150375993 5318572 301805..302512 1 NC_009620.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMb20287 hypothetical protein; hypothetical protein 302512 5318572 Smed_3844 Sinorhizobium medicae WSM419 hypothetical protein YP_001312589.1 301805 D 366394 CDS YP_001312590.1 150375994 5318573 complement(302533..303612) 1 NC_009620.1 PFAM: NAD/NADP octopine/nopaline dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: sme:SMb20286 hypothetical protein; opine dehydrogenase 303612 5318573 Smed_3845 Sinorhizobium medicae WSM419 opine dehydrogenase YP_001312590.1 302533 R 366394 CDS YP_001312591.1 150375995 5318721 303777..304808 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20285 putative transcriptional regulator protein; LysR family transcriptional regulator 304808 5318721 Smed_3846 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312591.1 303777 D 366394 CDS YP_001312592.1 150375996 5318722 304805..305905 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20284 putative ABC transporter periplasmic spermidineputrescine-binding protein; extracellular solute-binding protein 305905 5318722 Smed_3847 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312592.1 304805 D 366394 CDS YP_001312593.1 150375997 5318723 306037..307020 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20283 probable spermidineputrescine ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 307020 5318723 Smed_3848 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312593.1 306037 D 366394 CDS YP_001312594.1 150375998 5318724 307031..307822 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20282 probable spermidineputrescine ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 307822 5318724 Smed_3849 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312594.1 307031 D 366394 CDS YP_001312595.1 150375999 5318725 307825..308895 1 NC_009620.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20281 probable spermidineputrescine ABC transporter ATP-binding protein; spermidine/putrescine ABC transporter ATPase 308895 5318725 Smed_3850 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase YP_001312595.1 307825 D 366394 CDS YP_001312596.1 150376000 5318726 308974..310440 1 NC_009620.1 KEGG: sme:SMb20280 hypothetical protein; hypothetical protein 310440 5318726 Smed_3851 Sinorhizobium medicae WSM419 hypothetical protein YP_001312596.1 308974 D 366394 CDS YP_001312597.1 150376001 5318727 310477..310980 1 NC_009620.1 KEGG: sme:SMb20279 hypothetical protein; hypothetical protein 310980 5318727 Smed_3852 Sinorhizobium medicae WSM419 hypothetical protein YP_001312597.1 310477 D 366394 CDS YP_001312598.1 150376002 5318728 310982..311560 1 NC_009620.1 TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMb20278 hypothetical protein; peroxidase-like protein 311560 5318728 Smed_3853 Sinorhizobium medicae WSM419 peroxidase-like protein YP_001312598.1 310982 D 366394 CDS YP_001312599.1 150376003 5318729 complement(311627..312970) 1 NC_009620.1 PFAM: aminotransferase class-III; KEGG: sme:SMb20277 hypothetical protein; hypothetical protein 312970 5318729 Smed_3854 Sinorhizobium medicae WSM419 hypothetical protein YP_001312599.1 311627 R 366394 CDS YP_001312600.1 150376004 5318730 complement(312967..313857) 1 NC_009620.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMb20276 putative transcriptional regulator protein; RpiR family transcriptional regulator 313857 5318730 Smed_3855 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001312600.1 312967 R 366394 CDS YP_001312601.1 150376005 5318293 313948..314805 1 NC_009620.1 PFAM: protein of unknown function DUF849; KEGG: sme:SMb20275 hypothetical protein; hypothetical protein 314805 5318293 Smed_3856 Sinorhizobium medicae WSM419 hypothetical protein YP_001312601.1 313948 D 366394 CDS YP_001312602.1 150376006 5318294 314970..315155 1 NC_009620.1 KEGG: sme:SMb20274 hypothetical protein; hypothetical protein 315155 5318294 Smed_3857 Sinorhizobium medicae WSM419 hypothetical protein YP_001312602.1 314970 D 366394 CDS YP_001312603.1 150376007 5318295 315409..315597 1 NC_009620.1 KEGG: sme:SMb20273 hypothetical protein; hypothetical protein 315597 5318295 Smed_3858 Sinorhizobium medicae WSM419 hypothetical protein YP_001312603.1 315409 D 366394 CDS YP_001312604.1 150376008 5318296 complement(315667..316875) 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20272 putative transporter protein; major facilitator transporter 316875 5318296 Smed_3859 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312604.1 315667 R 366394 CDS YP_001312605.1 150376009 5318297 complement(317093..317524) 1 NC_009620.1 PFAM: OsmC family protein; KEGG: sme:SMb20271 putative redox protein; OsmC family protein 317524 5318297 Smed_3860 Sinorhizobium medicae WSM419 OsmC family protein YP_001312605.1 317093 R 366394 CDS YP_001312606.1 150376010 5318298 complement(317602..318630) 1 NC_009620.1 PFAM: proline racemase; KEGG: sme:SMb20270 putative proline racemase protein; proline racemase 318630 5318298 Smed_3861 Sinorhizobium medicae WSM419 proline racemase YP_001312606.1 317602 R 366394 CDS YP_001312607.1 150376011 5318299 complement(318693..320384) 1 NC_009620.1 PFAM: protein of unknown function DUF126; protein of unknown function DUF521; KEGG: sme:SMb20269 hypothetical protein; hypothetical protein 320384 5318299 Smed_3862 Sinorhizobium medicae WSM419 hypothetical protein YP_001312607.1 318693 R 366394 CDS YP_001312608.1 150376012 5318300 complement(320381..321382) 1 NC_009620.1 PFAM: proline racemase; KEGG: sme:SMb20268 putative proline racemase protein; hydroxyproline-2-epimerase 321382 5318300 Smed_3863 Sinorhizobium medicae WSM419 hydroxyproline-2-epimerase YP_001312608.1 320381 R 366394 CDS YP_001312609.1 150376013 5318301 complement(321397..322638) 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb20267 putative D-amino acid dehydrogenase protein; D-amino-acid dehydrogenase 322638 5318301 Smed_3864 Sinorhizobium medicae WSM419 D-amino-acid dehydrogenase YP_001312609.1 321397 R 366394 CDS YP_001312610.1 150376014 5318864 complement(322639..323361) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20266 putative amino acid ABC transporter ATP-binding protein; ABC transporter-like protein 323361 5318864 Smed_3865 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312610.1 322639 R 366394 CDS YP_001312611.1 150376015 5318865 complement(323354..324007) 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20265 putative amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 324007 5318865 Smed_3866 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001312611.1 323354 R 366394 CDS YP_001312612.1 150376016 5318866 complement(324018..324683) 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20264 putative amino acid ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 324683 5318866 Smed_3867 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001312612.1 324018 R 366394 CDS YP_001312613.1 150376017 5318867 complement(324750..325556) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb20263 putative ABC transporter periplasmic amino acid-binding protein; extracellular solute-binding protein 325556 5318867 Smed_3868 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312613.1 324750 R 366394 CDS YP_001312614.1 150376018 5318868 complement(325740..327257) 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20262 putative semialdehyde dehydrogenase protein; aldehyde dehydrogenase 327257 5318868 Smed_3869 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001312614.1 325740 R 366394 CDS YP_001312615.1 150376019 5318869 327573..328610 1 NC_009620.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sme:SMb20261 putative malate dehydrogenase protein; malate/L-lactate dehydrogenase 328610 5318869 Smed_3870 Sinorhizobium medicae WSM419 malate/L-lactate dehydrogenase YP_001312615.1 327573 D 366394 CDS YP_001312616.1 150376020 5318870 328762..329139 1 NC_009620.1 PFAM: protein of unknown function DUF1232; KEGG: sme:SMb20260 hypothetical protein; hypothetical protein 329139 5318870 Smed_3871 Sinorhizobium medicae WSM419 hypothetical protein YP_001312616.1 328762 D 366394 CDS YP_001312617.1 150376021 5318871 329189..330229 1 NC_009620.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: sme:SMb20028 hypothetical protein; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 330229 5318871 Smed_3872 Sinorhizobium medicae WSM419 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_001312617.1 329189 D 366394 CDS YP_001312618.1 150376022 5318872 complement(330415..331377) 1 NC_009620.1 PFAM: dihydrodipicolinate synthetase; KEGG: sme:SMb20259 putative dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 331377 5318872 Smed_3873 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001312618.1 330415 R 366394 CDS YP_001312619.1 150376023 5318873 complement(331498..332208) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20258 putative transcriptional regulator protein; GntR family transcriptional regulator 332208 5318873 Smed_3874 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312619.1 331498 R 366394 CDS YP_001312620.1 150376024 5318555 complement(332366..333469) 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMb20257 putative adenylate cyclase protein; putative adenylate/guanylate cyclase 333469 5318555 Smed_3875 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001312620.1 332366 R 366394 CDS YP_001312621.1 150376025 5318556 333625..334074 1 NC_009620.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMb20256 hypothetical protein; activator of Hsp90 ATPase 1 family protein 334074 5318556 Smed_3876 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001312621.1 333625 D 366394 CDS YP_001312622.1 150376026 5318557 334128..334730 1 NC_009620.1 PFAM: protein of unknown function DUF1003; KEGG: sme:SMb20255 hypothetical protein; hypothetical protein 334730 5318557 Smed_3877 Sinorhizobium medicae WSM419 hypothetical protein YP_001312622.1 334128 D 366394 CDS YP_001312623.1 150376027 5318558 334831..335106 1 NC_009620.1 KEGG: sme:SMb20254 hypothetical protein; hypothetical protein 335106 5318558 Smed_3878 Sinorhizobium medicae WSM419 hypothetical protein YP_001312623.1 334831 D 366394 CDS YP_001312624.1 150376028 5318559 335156..336220 1 NC_009620.1 KEGG: sme:SMb20253 hypothetical protein; hypothetical protein 336220 5318559 Smed_3879 Sinorhizobium medicae WSM419 hypothetical protein YP_001312624.1 335156 D 366394 CDS YP_001312625.1 150376029 5318560 336267..337646 1 NC_009620.1 KEGG: sme:SMb20252 hypothetical protein; hypothetical protein 337646 5318560 Smed_3880 Sinorhizobium medicae WSM419 hypothetical protein YP_001312625.1 336267 D 366394 CDS YP_001312626.1 150376030 5318561 complement(337544..338521) 1 NC_009620.1 KEGG: sme:SMb20251 hypothetical protein; hypothetical protein 338521 5318561 Smed_3881 Sinorhizobium medicae WSM419 hypothetical protein YP_001312626.1 337544 R 366394 CDS YP_001312627.1 150376031 5318562 complement(338563..339159) 1 NC_009620.1 PFAM: Phosphoglycerate mutase; KEGG: sme:SMb20250 hypothetical protein; phosphoglycerate mutase 339159 5318562 Smed_3882 Sinorhizobium medicae WSM419 phosphoglycerate mutase YP_001312627.1 338563 R 366394 CDS YP_001312628.1 150376032 5318563 complement(339156..340259) 1 NC_009620.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SMb20249 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase 340259 5318563 Smed_3883 Sinorhizobium medicae WSM419 myo-inositol-1-phosphate synthase YP_001312628.1 339156 R 366394 CDS YP_001312629.1 150376033 5318564 340409..342157 1 NC_009620.1 KEGG: sme:SMb20248 hypothetical protein; hypothetical protein 342157 5318564 Smed_3884 Sinorhizobium medicae WSM419 hypothetical protein YP_001312629.1 340409 D 366394 CDS YP_001312630.1 150376034 5318679 complement(342261..343286) 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb20247 putative oxidoreductase protein; oxidoreductase domain-containing protein 343286 5318679 Smed_3885 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001312630.1 342261 R 366394 CDS YP_001312631.1 150376035 5318680 complement(343279..344271) 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20246 putative oxidoreductase protein; alcohol dehydrogenase 344271 5318680 Smed_3886 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312631.1 343279 R 366394 CDS YP_001312632.1 150376036 5318681 344603..345709 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: sme:SMb20245 putative NDP-glucose dehydrataseepimerase protein; NAD-dependent epimerase/dehydratase 345709 5318681 Smed_3887 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312632.1 344603 D 366394 CDS YP_001312633.1 150376037 5318682 345706..346827 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb20244 putative CDP-tyvelose-2-epimerase protein; NAD-dependent epimerase/dehydratase 346827 5318682 Smed_3888 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312633.1 345706 D 366394 CDS YP_001312634.1 150376038 5318683 346824..347975 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb20243 putative glycosyltransferase protein; group 1 glycosyl transferase 347975 5318683 Smed_3889 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001312634.1 346824 D 366394 CDS YP_001312635.1 150376039 5318684 347980..349110 1 NC_009620.1 KEGG: sme:SMb20242 hypothetical protein; hypothetical protein 349110 5318684 Smed_3890 Sinorhizobium medicae WSM419 hypothetical protein YP_001312635.1 347980 D 366394 CDS YP_001312636.1 150376040 5318685 349107..350192 1 NC_009620.1 KEGG: sme:SMb20241 hypothetical protein; hypothetical protein 350192 5318685 Smed_3891 Sinorhizobium medicae WSM419 hypothetical protein YP_001312636.1 349107 D 366394 CDS YP_001312637.1 150376041 5318686 350189..351307 1 NC_009620.1 KEGG: sme:SMb20240 hypothetical protein; hypothetical protein 351307 5318686 Smed_3892 Sinorhizobium medicae WSM419 hypothetical protein YP_001312637.1 350189 D 366394 CDS YP_001312638.1 150376042 5318687 351327..352367 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: sme:SMb20239 putative dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase 352367 5318687 Smed_3893 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001312638.1 351327 D 366394 CDS YP_001312639.1 150376043 5318688 352370..353143 1 NC_009620.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb20238 hypothetical protein; type 11 methyltransferase 353143 5318688 Smed_3894 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001312639.1 352370 D 366394 CDS YP_001312640.1 150376044 5318210 complement(354012..354263) 1 NC_009620.1 KEGG: mes:Meso_2789 hypothetical protein; hypothetical protein 354263 5318210 Smed_3897 Sinorhizobium medicae WSM419 hypothetical protein YP_001312640.1 354012 R 366394 CDS YP_001312641.1 150376045 5318211 complement(354260..354604) 1 NC_009620.1 KEGG: sme:SMb20236 hypothetical protein; hypothetical protein 354604 5318211 Smed_3898 Sinorhizobium medicae WSM419 hypothetical protein YP_001312641.1 354260 R 366394 CDS YP_001312642.1 150376046 5318212 complement(354820..355785) 1 NC_009620.1 KEGG: sme:SMb20229 probable nutrient deprivation-induced protein; putative nutrient deprivation-induced protein 355785 5318212 Smed_3899 Sinorhizobium medicae WSM419 putative nutrient deprivation-induced protein YP_001312642.1 354820 R 366394 CDS YP_001312643.1 150376047 5318213 complement(355782..356201) 1 NC_009620.1 KEGG: sme:SMb20228 putative nutrient deprivation-induced protein; putative nutrient deprivation-induced protein 356201 5318213 Smed_3900 Sinorhizobium medicae WSM419 putative nutrient deprivation-induced protein YP_001312643.1 355782 R 366394 CDS YP_001312644.1 150376048 5318214 complement(356194..356766) 1 NC_009620.1 KEGG: sme:SMb20227 probable nutrient deprivation-induced protein; putative nutrient deprivation-induced protein 356766 5318214 Smed_3901 Sinorhizobium medicae WSM419 putative nutrient deprivation-induced protein YP_001312644.1 356194 R 366394 CDS YP_001312645.1 150376049 5318215 complement(356886..357059) 1 NC_009620.1 KEGG: sme:SMb20226 hypothetical protein; hypothetical protein 357059 5318215 Smed_3902 Sinorhizobium medicae WSM419 hypothetical protein YP_001312645.1 356886 R 366394 CDS YP_001312646.1 150376050 5318216 357222..357917 1 NC_009620.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sme:SMb20225 probable osmotically inducible sensory protein; transport-associated protein 357917 5318216 Smed_3903 Sinorhizobium medicae WSM419 transport-associated protein YP_001312646.1 357222 D 366394 CDS YP_001312647.1 150376051 5318217 complement(357970..358473) 1 NC_009620.1 KEGG: mes:Meso_3515 hypothetical protein; hypothetical protein 358473 5318217 Smed_3904 Sinorhizobium medicae WSM419 hypothetical protein YP_001312647.1 357970 R 366394 CDS YP_001312648.1 150376052 5318639 358652..358831 1 NC_009620.1 hypothetical protein 358831 5318639 Smed_3905 Sinorhizobium medicae WSM419 hypothetical protein YP_001312648.1 358652 D 366394 CDS YP_001312649.1 150376053 5318640 359037..359438 1 NC_009620.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20222 hypothetical protein; cupin 2 domain-containing protein 359438 5318640 Smed_3906 Sinorhizobium medicae WSM419 cupin 2 domain-containing protein YP_001312649.1 359037 D 366394 CDS YP_001312650.1 150376054 5318641 359656..360393 1 NC_009620.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMb20219 putative response regulator protein; two component transcriptional regulator 360393 5318641 Smed_3907 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001312650.1 359656 D 366394 CDS YP_001312651.1 150376055 5318642 360393..361718 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMb20218 putative sensor histidine kinase protein; integral membrane sensor signal transduction histidine kinase 361718 5318642 Smed_3908 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001312651.1 360393 D 366394 CDS YP_001312652.1 150376056 5318643 complement(361799..362458) 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb20217 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 362458 5318643 Smed_3909 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001312652.1 361799 R 366394 CDS YP_001312653.1 150376057 5318644 complement(362671..363717) 1 NC_009620.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20216 putative epoxide hydrolase protein; alpha/beta hydrolase fold protein 363717 5318644 Smed_3910 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001312653.1 362671 R 366394 CDS YP_001312654.1 150376058 5318645 complement(363994..364668) 1 NC_009620.1 PFAM: ThiJ/PfpI domain protein; KEGG: sme:SMb20212 hypothetical protein; ThiJ/PfpI domain-containing protein 364668 5318645 Smed_3911 Sinorhizobium medicae WSM419 ThiJ/PfpI domain-containing protein YP_001312654.1 363994 R 366394 CDS YP_001312655.1 150376059 5318646 364865..365812 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20211 putative transcriptional regulator protein; LysR family transcriptional regulator 365812 5318646 Smed_3912 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312655.1 364865 D 366394 CDS YP_001312656.1 150376060 5318647 365935..366648 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb20210 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 366648 5318647 Smed_3913 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312656.1 365935 D 366394 CDS YP_001312657.1 150376061 5318648 366695..366934 1 NC_009620.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: sme:SMb20209 hypothetical protein; 4-oxalocrotonate tautomerase 366934 5318648 Smed_3914 Sinorhizobium medicae WSM419 4-oxalocrotonate tautomerase YP_001312657.1 366695 D 366394 CDS YP_001312658.1 150376062 5318700 complement(366981..368108) 1 NC_009620.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sme:SMb20208 probable pyrroloquinoline quinone synthesis protein E; pyrroloquinoline quinone biosynthesis protein PqqE 368108 5318700 Smed_3915 Sinorhizobium medicae WSM419 pyrroloquinoline quinone biosynthesis protein PqqE YP_001312658.1 366981 R 366394 CDS YP_001312659.1 150376063 5318701 complement(368105..368401) 1 NC_009620.1 PFAM: coenzyme PQQ synthesis D; KEGG: sme:SMb20207 putative pyrroloquinoline quinone synthesis protein D; coenzyme PQQ synthesis D 368401 5318701 Smed_3916 Sinorhizobium medicae WSM419 coenzyme PQQ synthesis D YP_001312659.1 368105 R 366394 CDS YP_001312660.1 150376064 5318702 complement(368398..369168) 1 NC_009620.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 369168 5318702 Smed_3917 Sinorhizobium medicae WSM419 pyrroloquinoline quinone biosynthesis protein PqqC YP_001312660.1 368398 R 366394 CDS YP_001312661.1 150376065 5318703 complement(369165..370076) 1 NC_009620.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 370076 5318703 Smed_3918 Sinorhizobium medicae WSM419 pyrroloquinoline quinone biosynthesis protein PqqB YP_001312661.1 369165 R 366394 CDS YP_001312662.1 150376066 5318704 complement(370585..371526) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20203 probable transcriptional regulator protein; LysR family transcriptional regulator 371526 5318704 Smed_3919 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312662.1 370585 R 366394 CDS YP_001312663.1 150376067 5318705 371628..372677 1 NC_009620.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 372677 5318705 Smed_3920 Sinorhizobium medicae WSM419 fructose-1,6-bisphosphatase YP_001312663.1 371628 D 366394 CDS YP_001312664.1 150376068 5318706 372688..373557 1 NC_009620.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: sme:SMb20201 putative phosphoribulokinase protein; phosphoribulokinase 373557 5318706 Smed_3921 Sinorhizobium medicae WSM419 phosphoribulokinase YP_001312664.1 372688 D 366394 CDS YP_001312665.1 150376069 5318707 373568..375655 1 NC_009620.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 375655 5318707 Smed_3922 Sinorhizobium medicae WSM419 transketolase YP_001312665.1 373568 D 366394 CDS YP_001312666.1 150376070 5318708 375658..376737 1 NC_009620.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 376737 5318708 Smed_3923 Sinorhizobium medicae WSM419 fructose-1,6-bisphosphate aldolase YP_001312666.1 375658 D 366394 CDS YP_001312667.1 150376071 5318709 376768..378228 1 NC_009620.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 378228 rbcL 5318709 rbcL Sinorhizobium medicae WSM419 ribulose bisophosphate carboxylase YP_001312667.1 376768 D 366394 CDS YP_001312668.1 150376072 5318761 378252..378641 1 NC_009620.1 PFAM: ribulose bisphosphate carboxylase small chain; KEGG: sme:SMb20197 putative ribulose-1,5-bisphosphate carboxylase small subunit protein; ribulose-bisphosphate carboxylase 378641 5318761 Smed_3925 Sinorhizobium medicae WSM419 ribulose-bisphosphate carboxylase YP_001312668.1 378252 D 366394 CDS YP_001312669.1 150376073 5318762 378652..379587 1 NC_009620.1 TIGRFAM: CbxX/CfqX monofunctional; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sme:SMb20196 probable CbbX protein; protein CbxX/CfqX 379587 5318762 Smed_3926 Sinorhizobium medicae WSM419 protein CbxX/CfqX YP_001312669.1 378652 D 366394 CDS YP_001312670.1 150376074 5318763 379584..380270 1 NC_009620.1 PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: sme:SMb20195 putative pentose-5-phosphate-3-epimerase protein; ribulose-phosphate 3-epimerase 380270 5318763 Smed_3927 Sinorhizobium medicae WSM419 ribulose-phosphate 3-epimerase YP_001312670.1 379584 D 366394 CDS YP_001312671.1 150376075 5318764 380274..380840 1 NC_009620.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMb20194 hypothetical protein; alkyl hydroperoxide reductase 380840 5318764 Smed_3928 Sinorhizobium medicae WSM419 alkyl hydroperoxide reductase YP_001312671.1 380274 D 366394 CDS YP_001312672.1 150376076 5318765 complement(381061..381993) 1 NC_009620.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 381993 5318765 Smed_3929 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001312672.1 381061 R 366394 CDS YP_001312673.1 150376077 5318766 complement(382401..382970) 1 NC_009620.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 382970 5318766 Smed_3930 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001312673.1 382401 R 366394 CDS YP_001312674.1 150376078 5318767 complement(383090..383881) 1 NC_009620.1 PFAM: ABC-2 type transporter; KEGG: sme:SMb20185 putative ABC-2 type transport system permease protein; ABC-2 type transporter 383881 5318767 Smed_3931 Sinorhizobium medicae WSM419 ABC-2 type transporter YP_001312674.1 383090 R 366394 CDS YP_001312675.1 150376079 5318768 complement(383878..384606) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20184 putative ABC transporter ATP-binding protein; ABC transporter-like protein 384606 5318768 Smed_3932 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312675.1 383878 R 366394 CDS YP_001312676.1 150376080 5318769 complement(384593..385240) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20183 putative ABC transporter ATP-binding protein; ABC transporter-like protein 385240 5318769 Smed_3933 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312676.1 384593 R 366394 CDS YP_001312677.1 150376081 5318515 complement(385237..386016) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20182 putative ABC transporter protein; binding-protein-dependent transport systems inner membrane component 386016 5318515 Smed_3934 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312677.1 385237 R 366394 CDS YP_001312678.1 150376082 5318516 complement(385991..386974) 1 NC_009620.1 KEGG: sme:SMb20181 putative ABC transporter periplasmic solute-binding protein; putative ABC transporter periplasmic solute-binding protein 386974 5318516 Smed_3935 Sinorhizobium medicae WSM419 putative ABC transporter periplasmic solute-binding protein YP_001312678.1 385991 R 366394 CDS YP_001312679.1 150376083 5318517 complement(387038..387481) 1 NC_009620.1 KEGG: sme:SMb20180 hypothetical protein; hypothetical protein 387481 5318517 Smed_3936 Sinorhizobium medicae WSM419 hypothetical protein YP_001312679.1 387038 R 366394 CDS YP_001312680.1 150376084 5318518 complement(387522..388526) 1 NC_009620.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: WD-40 repeat protein; KEGG: sme:SMb20179 hypothetical protein; YVTN beta-propeller repeat-containing protein 388526 5318518 Smed_3937 Sinorhizobium medicae WSM419 YVTN beta-propeller repeat-containing protein YP_001312680.1 387522 R 366394 CDS YP_001312681.1 150376085 5318519 complement(388528..389817) 1 NC_009620.1 KEGG: sme:SMb20178 hypothetical protein; hypothetical protein 389817 5318519 Smed_3938 Sinorhizobium medicae WSM419 hypothetical protein YP_001312681.1 388528 R 366394 CDS YP_001312682.1 150376086 5318520 389937..390446 1 NC_009620.1 KEGG: sme:SMb20177 hypothetical protein; hypothetical protein 390446 5318520 Smed_3939 Sinorhizobium medicae WSM419 hypothetical protein YP_001312682.1 389937 D 366394 CDS YP_001312683.1 150376087 5318521 complement(390486..391031) 1 NC_009620.1 KEGG: sme:SMb20176 hypothetical protein; hypothetical protein 391031 5318521 Smed_3940 Sinorhizobium medicae WSM419 hypothetical protein YP_001312683.1 390486 R 366394 CDS YP_001312684.1 150376088 5318522 complement(391028..391885) 1 NC_009620.1 SMART: extracellular solute-binding protein family 3; KEGG: sme:SMb20175 putative methanol oxidation protein; extracellular solute-binding protein 391885 5318522 Smed_3941 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312684.1 391028 R 366394 CDS YP_001312685.1 150376089 5318523 complement(391854..392381) 1 NC_009620.1 KEGG: sme:SMb20174 putative cytochrome c protein; putative cytochrome c protein 392381 5318523 Smed_3942 Sinorhizobium medicae WSM419 putative cytochrome c protein YP_001312685.1 391854 R 366394 CDS YP_001312686.1 150376090 5318524 complement(392457..394262) 1 NC_009620.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sme:SMb20173 putative methanol dehydrogenase protein, large subunit; Pyrrolo-quinoline quinone 394262 5318524 Smed_3943 Sinorhizobium medicae WSM419 Pyrrolo-quinoline quinone YP_001312686.1 392457 R 366394 CDS YP_001312687.1 150376091 5318052 complement(394439..394849) 1 NC_009620.1 PFAM: cytochrome c class I; KEGG: sme:SMb20172 putative cytochrome c protein; cytochrome c class I 394849 5318052 Smed_3944 Sinorhizobium medicae WSM419 cytochrome c class I YP_001312687.1 394439 R 366394 CDS YP_001312688.1 150376092 5318053 complement(394863..395693) 1 NC_009620.1 TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; KEGG: sme:SMb20171 putative S-formylglutathione hydrolase protein; S-formylglutathione hydrolase 395693 5318053 Smed_3945 Sinorhizobium medicae WSM419 S-formylglutathione hydrolase YP_001312688.1 394863 R 366394 CDS YP_001312689.1 150376093 5318054 complement(395702..396829) 1 NC_009620.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20170 probable glutathione-dependent formaldehyde dehydrogenase protein; S-(hydroxymethyl)glutathione dehydrogenase 396829 5318054 Smed_3946 Sinorhizobium medicae WSM419 S-(hydroxymethyl)glutathione dehydrogenase YP_001312689.1 395702 R 366394 CDS YP_001312690.1 150376094 5318055 397000..397638 1 NC_009620.1 KEGG: sme:SMb20169 hypothetical protein; hypothetical protein 397638 5318055 Smed_3947 Sinorhizobium medicae WSM419 hypothetical protein YP_001312690.1 397000 D 366394 CDS YP_001312691.1 150376095 5318056 complement(397704..398762) 1 NC_009620.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMb20168 hypothetical protein; beta-lactamase domain-containing protein 398762 5318056 Smed_3948 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001312691.1 397704 R 366394 CDS YP_001312692.1 150376096 5318057 398915..399727 1 NC_009620.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: sme:SMb20167 hypothetical protein; sulfur oxidation protein SoxZ 399727 5318057 Smed_3949 Sinorhizobium medicae WSM419 sulfur oxidation protein SoxZ YP_001312692.1 398915 D 366394 CDS YP_001312693.1 150376097 5318058 complement(399820..400173) 1 NC_009620.1 KEGG: sme:SMb20166 hypothetical protein; hypothetical protein 400173 5318058 Smed_3950 Sinorhizobium medicae WSM419 hypothetical protein YP_001312693.1 399820 R 366394 CDS YP_001312694.1 150376098 5318059 complement(400170..400934) 1 NC_009620.1 KEGG: sme:SMb20165 hypothetical protein; hypothetical protein 400934 5318059 Smed_3951 Sinorhizobium medicae WSM419 hypothetical protein YP_001312694.1 400170 R 366394 CDS YP_001312695.1 150376099 5318060 complement(400959..403202) 1 NC_009620.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMb20164 putative sensor histidine kinase protein; histidine kinase 403202 5318060 Smed_3952 Sinorhizobium medicae WSM419 histidine kinase YP_001312695.1 400959 R 366394 CDS YP_001312696.1 150376100 5318061 complement(403199..404368) 1 NC_009620.1 PFAM: domain of unknown function DUF1745; KEGG: sme:SMb20163 hypothetical protein; hypothetical protein 404368 5318061 Smed_3953 Sinorhizobium medicae WSM419 hypothetical protein YP_001312696.1 403199 R 366394 CDS YP_001312697.1 150376101 5318188 complement(404412..405101) 1 NC_009620.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMb20162 putative transcriptional regulator protein; two component LuxR family transcriptional regulator 405101 5318188 Smed_3954 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001312697.1 404412 R 366394 CDS YP_001312698.1 150376102 5318189 complement(405341..405550) 1 NC_009620.1 KEGG: rpe:RPE_0841 hypothetical protein; hypothetical protein 405550 5318189 Smed_3955 Sinorhizobium medicae WSM419 hypothetical protein YP_001312698.1 405341 R 366394 CDS YP_001312699.1 150376103 5318191 complement(405893..406240) 1 NC_009620.1 KEGG: mlo:msl0999 hypothetical protein; RpiR family transcriptional regulator 406240 5318191 Smed_3957 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001312699.1 405893 R 366394 CDS YP_001312700.1 150376104 5318192 complement(406237..406857) 1 NC_009620.1 PFAM: Dual specificity protein phosphatase; KEGG: sme:SMb20160 hypothetical protein; Dual specificity protein phosphatase 406857 5318192 Smed_3958 Sinorhizobium medicae WSM419 Dual specificity protein phosphatase YP_001312700.1 406237 R 366394 CDS YP_001312701.1 150376105 5318193 complement(406914..407870) 1 NC_009620.1 PFAM: inositol monophosphatase; KEGG: sme:SMb20159 putative inositol monophosphatase protein; inositol-phosphate phosphatase 407870 5318193 Smed_3959 Sinorhizobium medicae WSM419 inositol-phosphate phosphatase YP_001312701.1 406914 R 366394 CDS YP_001312702.1 150376106 5318194 complement(407867..408994) 1 NC_009620.1 KEGG: sme:SMb20158 hypothetical ABC transporter periplasmic solute-binding protein; ABC transporter periplasmic solute-binding protein 408994 5318194 Smed_3960 Sinorhizobium medicae WSM419 ABC transporter periplasmic solute-binding protein YP_001312702.1 407867 R 366394 CDS YP_001312703.1 150376107 5318195 complement(409077..410201) 1 NC_009620.1 KEGG: sme:SMb20157 hypothetical ABC transporter periplasmic solute-binding protein; ABC transporter periplasmic solute-binding protein 410201 5318195 Smed_3961 Sinorhizobium medicae WSM419 ABC transporter periplasmic solute-binding protein YP_001312703.1 409077 R 366394 CDS YP_001312704.1 150376108 5318196 complement(410252..411388) 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20156 putative ABC transporter ATP-binding protein; ABC transporter-like protein 411388 5318196 Smed_3962 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312704.1 410252 R 366394 CDS YP_001312705.1 150376109 5318197 complement(411388..413238) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20155 putative ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 413238 5318197 Smed_3963 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312705.1 411388 R 366394 CDS YP_001312706.1 150376110 5319062 413700..414686 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb20154 putative transcriptional regulator protein; periplasmic binding protein/LacI transcriptional regulator 414686 5319062 Smed_3964 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312706.1 413700 D 366394 CDS YP_001312707.1 150376111 5319063 complement(414748..416391) 1 NC_009620.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMb20153 hypothetical protein transmembrane; sodium-dependent inorganic phosphate (Pi) transporter 416391 5319063 Smed_3965 Sinorhizobium medicae WSM419 sodium-dependent inorganic phosphate (Pi) transporter YP_001312707.1 414748 R 366394 CDS YP_001312708.1 150376112 5319064 complement(416464..418182) 1 NC_009620.1 PFAM: metallophosphoesterase; KEGG: sme:SMb20152 hypothetical protein; metallophosphoesterase 418182 5319064 Smed_3966 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001312708.1 416464 R 366394 CDS YP_001312709.1 150376113 5319065 complement(418176..418793) 1 NC_009620.1 KEGG: sme:SMb20151 hypothetical protein; dual specificity protein phosphatase 418793 5319065 Smed_3967 Sinorhizobium medicae WSM419 dual specificity protein phosphatase YP_001312709.1 418176 R 366394 CDS YP_001312710.1 150376114 5319066 complement(418829..419689) 1 NC_009620.1 PFAM: inositol monophosphatase; KEGG: sme:SMb20150 putative inositol monophosphatase protein; inositol-phosphate phosphatase 419689 5319066 Smed_3968 Sinorhizobium medicae WSM419 inositol-phosphate phosphatase YP_001312710.1 418829 R 366394 CDS YP_001312711.1 150376115 5319067 complement(419904..420734) 1 NC_009620.1 PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_CH02571 probable chloride peroxidase protein; alpha/beta hydrolase fold protein 420734 5319067 Smed_3969 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001312711.1 419904 R 366394 CDS YP_001312712.1 150376116 5319068 complement(420931..422538) 1 NC_009620.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: sme:SMa1814 putative dioxygenase; hypothetical protein 422538 5319068 Smed_3970 Sinorhizobium medicae WSM419 hypothetical protein YP_001312712.1 420931 R 366394 CDS YP_001312713.1 150376117 5319069 complement(422535..422978) 1 NC_009620.1 PFAM: DoxX family protein; KEGG: sme:SMa1817 hypothetical protein; DoxX family protein 422978 5319069 Smed_3971 Sinorhizobium medicae WSM419 DoxX family protein YP_001312713.1 422535 R 366394 CDS YP_001312714.1 150376118 5319070 complement(422990..424867) 1 NC_009620.1 PFAM: Amidohydrolase 3; KEGG: rle:pRL120453 putative transcriptional regulatory protein; amidohydrolase 3 424867 5319070 Smed_3972 Sinorhizobium medicae WSM419 amidohydrolase 3 YP_001312714.1 422990 R 366394 CDS YP_001312715.1 150376119 5318106 complement(424975..425259) 1 NC_009620.1 PFAM: protein of unknown function DUF1427; KEGG: sme:SMa1820 hypothetical protein; hypothetical protein 425259 5318106 Smed_3973 Sinorhizobium medicae WSM419 hypothetical protein YP_001312715.1 424975 R 366394 CDS YP_001312716.1 150376120 5318107 complement(425341..425997) 1 NC_009620.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMa1821 hypothetical protein; isochorismatase hydrolase 425997 5318107 Smed_3974 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001312716.1 425341 R 366394 CDS YP_001312717.1 150376121 5318108 complement(426118..427026) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa1822 hypothetical protein; helix-turn-helix domain-containing protein 427026 5318108 Smed_3975 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312717.1 426118 R 366394 CDS YP_001312718.1 150376122 5318109 complement(427192..428202) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa1823 hypothetical protein; helix-turn-helix domain-containing protein 428202 5318109 Smed_3976 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312718.1 427192 R 366394 CDS YP_001312719.1 150376123 5318110 complement(428287..429192) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa1825 hypothetical protein; helix-turn-helix domain-containing protein 429192 5318110 Smed_3977 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312719.1 428287 R 366394 CDS YP_001312720.1 150376124 5318112 429562..430386 1 NC_009620.1 PFAM: manganese containing catalase; KEGG: rba:RB10727 manganese-containing catalase; catalase 430386 5318112 Smed_3979 Sinorhizobium medicae WSM419 catalase YP_001312720.1 429562 D 366394 CDS YP_001312721.1 150376125 5318113 430576..431637 1 NC_009620.1 KEGG: sme:SMb20149 hypothetical protein; hypothetical protein 431637 5318113 Smed_3980 Sinorhizobium medicae WSM419 hypothetical protein YP_001312721.1 430576 D 366394 CDS YP_001312722.1 150376126 5318114 431641..432342 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20148 putative transcriptional regulator protein; GntR family transcriptional regulator 432342 5318114 Smed_3981 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312722.1 431641 D 366394 CDS YP_001312723.1 150376127 5318115 complement(432757..433863) 1 NC_009620.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sme:SMb20147 putative alcohol dehydrogenase protein; iron-containing alcohol dehydrogenase 433863 5318115 Smed_3982 Sinorhizobium medicae WSM419 iron-containing alcohol dehydrogenase YP_001312723.1 432757 R 366394 CDS YP_001312724.1 150376128 5317909 complement(433860..434825) 1 NC_009620.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: sme:SMb20146 4-hydroxythreonine-4-phosphate dehydrogenase 2; 4-hydroxythreonine-4-phosphate dehydrogenase 434825 5317909 Smed_3983 Sinorhizobium medicae WSM419 4-hydroxythreonine-4-phosphate dehydrogenase YP_001312724.1 433860 R 366394 CDS YP_001312725.1 150376129 5317910 complement(434822..436018) 1 NC_009620.1 KEGG: sme:SMb20145 hypothetical protein; hypothetical protein 436018 5317910 Smed_3984 Sinorhizobium medicae WSM419 hypothetical protein YP_001312725.1 434822 R 366394 CDS YP_001312726.1 150376130 5317911 436358..437857 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb20144 putative ABC transporter oligopeptide-binding protein; extracellular solute-binding protein 437857 5317911 Smed_3985 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312726.1 436358 D 366394 CDS YP_001312727.1 150376131 5317912 437990..438904 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20143 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 438904 5317912 Smed_3986 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312727.1 437990 D 366394 CDS YP_001312728.1 150376132 5317913 438918..439841 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20142 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 439841 5317913 Smed_3987 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312728.1 438918 D 366394 CDS YP_001312729.1 150376133 5317914 439834..441477 1 NC_009620.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb20141 putative oligopeptide ABC transporter ATP-binding protein; ABC transporter-like protein 441477 5317914 Smed_3988 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312729.1 439834 D 366394 CDS YP_001312730.1 150376134 5317915 441477..442367 1 NC_009620.1 PFAM: dihydrodipicolinate synthetase; KEGG: sme:SMb20140 putative dihydrodipicolinate synthase protein; dihydrodipicolinate synthetase 442367 5317915 Smed_3989 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001312730.1 441477 D 366394 CDS YP_001312731.1 150376135 5317916 complement(442397..443644) 1 NC_009620.1 PFAM: monooxygenase FAD-binding; KEGG: msm:MSMEG_5719 oxidoreductase; FAD-binding monooxygenase 443644 5317916 Smed_3990 Sinorhizobium medicae WSM419 FAD-binding monooxygenase YP_001312731.1 442397 R 366394 CDS YP_001312732.1 150376136 5317917 443809..444924 1 NC_009620.1 PFAM: secretion protein HlyD family protein; KEGG: mag:amb3998 multidrug resistance efflux pump; secretion protein HlyD family protein 444924 5317917 Smed_3991 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001312732.1 443809 D 366394 CDS YP_001312733.1 150376137 5317918 444921..446582 1 NC_009620.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20698 putative transport protein, similar to E. coli multidrug resistance protein EmrB; EmrB/QacA family drug resistance transporter 446582 5317918 Smed_3992 Sinorhizobium medicae WSM419 EmrB/QacA family drug resistance transporter YP_001312733.1 444921 D 366394 CDS YP_001312734.1 150376138 5319240 446560..447726 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: ret:RHE_CH01194 probable adenylate cyclase protein; putative adenylate/guanylate cyclase 447726 5319240 Smed_3993 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001312734.1 446560 D 366394 CDS YP_001312735.1 150376139 5319241 complement(447776..448453) 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: cvi:CV0711 probable transcriptional regulator, TetR family; TetR family transcriptional regulator 448453 5319241 Smed_3994 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001312735.1 447776 R 366394 CDS YP_001312736.1 150376140 5319242 complement(448573..449088) 1 NC_009620.1 KEGG: sme:SMb20139 hypothetical protein; hypothetical protein 449088 5319242 Smed_3995 Sinorhizobium medicae WSM419 hypothetical protein YP_001312736.1 448573 R 366394 CDS YP_001312737.1 150376141 5319243 complement(449108..449998) 1 NC_009620.1 PFAM: beta-lactamase domain protein; KEGG: mes:Meso_3529 beta-lactamase-like; beta-lactamase domain-containing protein 449998 5319243 Smed_3996 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001312737.1 449108 R 366394 CDS YP_001312738.1 150376142 5319244 450483..451409 1 NC_009620.1 PFAM: amidohydrolase 2; KEGG: sme:SMb20138 hypothetical protein; amidohydrolase 2 451409 5319244 Smed_3997 Sinorhizobium medicae WSM419 amidohydrolase 2 YP_001312738.1 450483 D 366394 CDS YP_001312739.1 150376143 5319245 451449..452381 1 NC_009620.1 PFAM: amidohydrolase 2; KEGG: sme:SMb20137 hypothetical protein; amidohydrolase 2 452381 5319245 Smed_3998 Sinorhizobium medicae WSM419 amidohydrolase 2 YP_001312739.1 451449 D 366394 CDS YP_001312740.1 150376144 5319246 452531..453904 1 NC_009620.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: sme:SMb20136 hypothetical protein; UbiD family decarboxylase 453904 5319246 Smed_3999 Sinorhizobium medicae WSM419 UbiD family decarboxylase YP_001312740.1 452531 D 366394 CDS YP_001312741.1 150376145 5319247 453934..454566 1 NC_009620.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: sme:SMb20135 putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 454566 5319247 Smed_4000 Sinorhizobium medicae WSM419 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001312741.1 453934 D 366394 CDS YP_001312742.1 150376146 5319248 454646..456037 1 NC_009620.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sme:SMb20134 putative permease protein; uracil-xanthine permease 456037 5319248 Smed_4001 Sinorhizobium medicae WSM419 uracil-xanthine permease YP_001312742.1 454646 D 366394 CDS YP_001312743.1 150376147 5319249 complement(456248..457288) 1 NC_009620.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sme:SMb20133 hypothetical protein; cobalamin synthesis protein P47K 457288 5319249 Smed_4002 Sinorhizobium medicae WSM419 cobalamin synthesis protein P47K YP_001312743.1 456248 R 366394 CDS YP_001312744.1 150376148 5318283 complement(457288..459606) 1 NC_009620.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb20132 probable aldehyde oxidase and xanthine dehydrogenase family protein transmembrane; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 459606 5318283 Smed_4003 Sinorhizobium medicae WSM419 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001312744.1 457288 R 366394 CDS YP_001312745.1 150376149 5318284 complement(459603..460088) 1 NC_009620.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMb20131 putative oxidoreductase protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 460088 5318284 Smed_4004 Sinorhizobium medicae WSM419 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001312745.1 459603 R 366394 CDS YP_001312746.1 150376150 5318285 complement(460085..460948) 1 NC_009620.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb20130 putative dehydrogenase protein; FAD-binding molybdopterin dehydrogenase 460948 5318285 Smed_4005 Sinorhizobium medicae WSM419 FAD-binding molybdopterin dehydrogenase YP_001312746.1 460085 R 366394 CDS YP_001312747.1 150376151 5318286 complement(461001..461780) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20129 putative transcriptional regulator protein; GntR family transcriptional regulator 461780 5318286 Smed_4006 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312747.1 461001 R 366394 CDS YP_001312748.1 150376152 5318287 462221..463519 1 NC_009620.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMb20128 putative deaminase protein; amidohydrolase 3 463519 5318287 Smed_4007 Sinorhizobium medicae WSM419 amidohydrolase 3 YP_001312748.1 462221 D 366394 CDS YP_001312749.1 150376153 5318288 463573..464556 1 NC_009620.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMb20127 putative simple sugar transport system substrate-binding protein; basic membrane lipoprotein 464556 5318288 Smed_4008 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001312749.1 463573 D 366394 CDS YP_001312750.1 150376154 5318289 464717..465814 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20126 putative sugar ABC transporter permease protein; inner-membrane translocator 465814 5318289 Smed_4009 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312750.1 464717 D 366394 CDS YP_001312751.1 150376155 5318290 465823..466755 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20125 putative sugar ABC transporter permease protein; inner-membrane translocator 466755 5318290 Smed_4010 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312751.1 465823 D 366394 CDS YP_001312752.1 150376156 5318291 466766..468292 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20124 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 468292 5318291 Smed_4011 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312752.1 466766 D 366394 CDS YP_001312753.1 150376157 5318292 468423..469319 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20123 putative transcriptional regulator protein; LysR family transcriptional regulator 469319 5318292 Smed_4012 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312753.1 468423 D 366394 CDS YP_001312754.1 150376158 5318822 complement(469325..470272) 1 NC_009620.1 PFAM: PfkB domain protein; KEGG: dra:DR1525 carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein 470272 5318822 Smed_4013 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001312754.1 469325 R 366394 CDS YP_001312755.1 150376159 5318823 complement(470282..471484) 1 NC_009620.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: ctc:CTC02530 Cys/Met metabolism lyase (PLP-dependent); cystathionine gamma-synthase 471484 5318823 Smed_4014 Sinorhizobium medicae WSM419 cystathionine gamma-synthase YP_001312755.1 470282 R 366394 CDS YP_001312756.1 150376160 5318824 complement(471527..472363) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease; binding-protein-dependent transport system inner membrane protein 472363 5318824 Smed_4015 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312756.1 471527 R 366394 CDS YP_001312757.1 150376161 5318825 complement(472360..473268) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease; binding-protein-dependent transport systems inner membrane component 473268 5318825 Smed_4016 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312757.1 472360 R 366394 CDS YP_001312758.1 150376162 5318826 complement(473294..474601) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC0436 sugar ABC transporter substrate-binding protein; extracellular solute-binding protein 474601 5318826 Smed_4017 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312758.1 473294 R 366394 CDS YP_001312759.1 150376163 5318827 474685..475539 1 NC_009620.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pmu:PM1714 hypothetical HI0143; RpiR family transcriptional regulator 475539 5318827 Smed_4018 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001312759.1 474685 D 366394 CDS YP_001312760.1 150376164 5318828 475540..476235 1 NC_009620.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: bja:bll8013 putative phosphoribosylanthranilate isomerase; N-(5'phosphoribosyl)anthranilate isomerase 476235 5318828 Smed_4019 Sinorhizobium medicae WSM419 N-(5'phosphoribosyl)anthranilate isomerase YP_001312760.1 475540 D 366394 CDS YP_001312761.1 150376165 5318829 476548..477567 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb20117 hypothetical sugar transferase protein; group 1 glycosyl transferase 477567 5318829 Smed_4020 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001312761.1 476548 D 366394 CDS YP_001312762.1 150376166 5318830 477697..479901 1 NC_009620.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: sme:SMb20116 hypothetical protein; amylo-alpha-16-glucosidase 479901 5318830 Smed_4021 Sinorhizobium medicae WSM419 amylo-alpha-16-glucosidase YP_001312762.1 477697 D 366394 CDS YP_001312763.1 150376167 5318322 480030..481751 1 NC_009620.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 481751 5318322 Smed_4022 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001312763.1 480030 D 366394 CDS YP_001312764.1 150376168 5318323 481779..482504 1 NC_009620.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: sme:SMb20114 hypothetical protein; hypothetical protein 482504 5318323 Smed_4023 Sinorhizobium medicae WSM419 hypothetical protein YP_001312764.1 481779 D 366394 CDS YP_001312765.1 150376169 5318324 482507..483439 1 NC_009620.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMb20113 putative dehydrogenase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 483439 5318324 Smed_4024 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001312765.1 482507 D 366394 CDS YP_001312766.1 150376170 5318325 complement(483569..484393) 1 NC_009620.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMb20112 hypothetical protein; hypothetical protein 484393 5318325 Smed_4025 Sinorhizobium medicae WSM419 hypothetical protein YP_001312766.1 483569 R 366394 CDS YP_001312767.1 150376171 5318326 complement(484435..486075) 1 NC_009620.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb20111 putative oligopeptide ABC transporter ATP-binding protein; ABC transporter-like protein 486075 5318326 Smed_4026 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312767.1 484435 R 366394 CDS YP_001312768.1 150376172 5318327 complement(486072..487019) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20110 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 487019 5318327 Smed_4027 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312768.1 486072 R 366394 CDS YP_001312769.1 150376173 5318328 complement(487016..487939) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20109 putative oligopeptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 487939 5318328 Smed_4028 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312769.1 487016 R 366394 CDS YP_001312770.1 150376174 5318329 complement(488012..489520) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb20108 putative ABC transporter periplasmic oligopeptide-binding protein; extracellular solute-binding protein 489520 5318329 Smed_4029 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312770.1 488012 R 366394 CDS YP_001312771.1 150376175 5318330 complement(489650..490606) 1 NC_009620.1 KEGG: sme:SMb20107 hypothetical protein; hypothetical protein 490606 5318330 Smed_4030 Sinorhizobium medicae WSM419 hypothetical protein YP_001312771.1 489650 R 366394 CDS YP_001312772.1 150376176 5318331 complement(490674..491405) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; protein of unknown function UPF0074; GntR domain protein; KEGG: sme:SMb20106 putative transcriptional regulator protein; GntR family transcriptional regulator 491405 5318331 Smed_4031 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312772.1 490674 R 366394 CDS YP_001312773.1 150376177 5318332 491508..492212 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20105 putative transcriptional regulator protein; GntR family transcriptional regulator 492212 5318332 Smed_4032 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312773.1 491508 D 366394 CDS YP_001312774.1 150376178 5318333 complement(492310..494112) 1 NC_009620.1 KEGG: sme:SMb20103 putative monooxygenase protein; putative monooxygenase 494112 5318333 Smed_4033 Sinorhizobium medicae WSM419 putative monooxygenase YP_001312774.1 492310 R 366394 CDS YP_001312775.1 150376179 5318334 complement(494181..495254) 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_L_281 hypothetical protein; alcohol dehydrogenase 495254 5318334 Smed_4034 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312775.1 494181 R 366394 CDS YP_001312776.1 150376180 5318335 complement(495427..497301) 1 NC_009620.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: sme:SMb20102 putative acetoin catabolism regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator 497301 5318335 Smed_4035 Sinorhizobium medicae WSM419 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001312776.1 495427 R 366394 CDS YP_001312777.1 150376181 5318336 complement(497461..498672) 1 NC_009620.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 498672 5318336 Smed_4036 Sinorhizobium medicae WSM419 hydroxyglutarate oxidase YP_001312777.1 497461 R 366394 CDS YP_001312778.1 150376182 5318337 complement(498798..499769) 1 NC_009620.1 KEGG: sme:SMb20100 putative dehydrogenase protein; putative dehydrogenase 499769 5318337 Smed_4037 Sinorhizobium medicae WSM419 putative dehydrogenase YP_001312778.1 498798 R 366394 CDS YP_001312779.1 150376183 5318338 complement(499771..501405) 1 NC_009620.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMb20099 putative trehalose synthase protein; alpha amylase catalytic protein 501405 5318338 Smed_4038 Sinorhizobium medicae WSM419 alpha amylase catalytic protein YP_001312779.1 499771 R 366394 CDS YP_001312780.1 150376184 5318339 complement(501405..501797) 1 NC_009620.1 PFAM: protein of unknown function DUF1362; KEGG: sme:SMb20098 hypothetical protein; hypothetical protein 501797 5318339 Smed_4039 Sinorhizobium medicae WSM419 hypothetical protein YP_001312780.1 501405 R 366394 CDS YP_001312781.1 150376185 5318340 complement(501806..503035) 1 NC_009620.1 PFAM: molybdopterin dehydrogenase FAD-binding; FAD linked oxidase domain protein; D-arabinono-14-lactone oxidase; KEGG: sme:SMb20097 hypothetical oxidoreductase protein; FAD linked oxidase domain-containing protein 503035 5318340 Smed_4040 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001312781.1 501806 R 366394 CDS YP_001312782.1 150376186 5318608 complement(503037..503414) 1 NC_009620.1 PFAM: protein of unknown function DUF1362; KEGG: sme:SMb20096 hypothetical protein; hypothetical protein 503414 5318608 Smed_4041 Sinorhizobium medicae WSM419 hypothetical protein YP_001312782.1 503037 R 366394 CDS YP_001312783.1 150376187 5318609 complement(503521..505338) 1 NC_009620.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sme:SMb20095 putative pyruvate oxidase protein; thiamine pyrophosphate binding domain-containing protein 505338 5318609 Smed_4042 Sinorhizobium medicae WSM419 thiamine pyrophosphate binding domain-containing protein YP_001312783.1 503521 R 366394 CDS YP_001312784.1 150376188 5318610 505436..507154 1 NC_009620.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: sme:SMb20094 putative phospholipase protein; phospholipase D/transphosphatidylase 507154 5318610 Smed_4043 Sinorhizobium medicae WSM419 phospholipase D/transphosphatidylase YP_001312784.1 505436 D 366394 CDS YP_001312785.1 150376189 5318611 complement(507049..507990) 1 NC_009620.1 KEGG: sme:SMb20093 hypothetical protein; hypothetical protein 507990 5318611 Smed_4044 Sinorhizobium medicae WSM419 hypothetical protein YP_001312785.1 507049 R 366394 CDS YP_001312786.1 150376190 5318612 508050..508778 1 NC_009620.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMb20092 hypothetical protein; endonuclease/exonuclease/phosphatase 508778 5318612 Smed_4045 Sinorhizobium medicae WSM419 endonuclease/exonuclease/phosphatase YP_001312786.1 508050 D 366394 CDS YP_001312787.1 150376191 5318613 complement(508902..509408) 1 NC_009620.1 PFAM: protein of unknown function DUF892; KEGG: sme:SMb20091 hypothetical protein; hypothetical protein 509408 5318613 Smed_4046 Sinorhizobium medicae WSM419 hypothetical protein YP_001312787.1 508902 R 366394 CDS YP_001312788.1 150376192 5318614 509738..510073 1 NC_009620.1 KEGG: sme:SMb20089 hypothetical protein; hypothetical protein 510073 5318614 Smed_4047 Sinorhizobium medicae WSM419 hypothetical protein YP_001312788.1 509738 D 366394 CDS YP_001312789.1 150376193 5318615 complement(510148..512130) 1 NC_009620.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Erythromycin esterase; KEGG: sme:SMb20088 hypothetical fusion protein; protein-L-isoaspartate O-methyltransferase 512130 5318615 Smed_4048 Sinorhizobium medicae WSM419 protein-L-isoaspartate O-methyltransferase YP_001312789.1 510148 R 366394 CDS YP_001312790.1 150376194 5318616 complement(512283..512834) 1 NC_009620.1 KEGG: sme:SMb20087 hypothetical protein; hypothetical protein 512834 5318616 Smed_4049 Sinorhizobium medicae WSM419 hypothetical protein YP_001312790.1 512283 R 366394 CDS YP_001312791.1 150376195 5318617 complement(513026..513280) 1 NC_009620.1 hypothetical protein 513280 5318617 Smed_4050 Sinorhizobium medicae WSM419 hypothetical protein YP_001312791.1 513026 R 366394 CDS YP_001312792.1 150376196 5318874 513420..513593 1 NC_009620.1 PFAM: protein of unknown function DUF1328; KEGG: sme:SMb20084 hypothetical protein transmembrane; hypothetical protein 513593 5318874 Smed_4051 Sinorhizobium medicae WSM419 hypothetical protein YP_001312792.1 513420 D 366394 CDS YP_001312793.1 150376197 5318875 513604..513885 1 NC_009620.1 hypothetical protein 513885 5318875 Smed_4052 Sinorhizobium medicae WSM419 hypothetical protein YP_001312793.1 513604 D 366394 CDS YP_001312794.1 150376198 5318877 complement(514409..514648) 1 NC_009620.1 KEGG: sme:SMb20083 hypothetical protein; hypothetical protein 514648 5318877 Smed_4054 Sinorhizobium medicae WSM419 hypothetical protein YP_001312794.1 514409 R 366394 CDS YP_001312795.1 150376199 5318878 514949..515764 1 NC_009620.1 KEGG: sme:SMb20082 hypothetical protein; hypothetical protein 515764 5318878 Smed_4055 Sinorhizobium medicae WSM419 hypothetical protein YP_001312795.1 514949 D 366394 CDS YP_001312796.1 150376200 5318879 515764..516474 1 NC_009620.1 PFAM: metallophosphoesterase; KEGG: sme:SMb20081 hypothetical protein; metallophosphoesterase 516474 5318879 Smed_4056 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001312796.1 515764 D 366394 CDS YP_001312797.1 150376201 5318880 complement(516518..517819) 1 NC_009620.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMb20080 putative alcohol dehydrogenase protein; alcohol dehydrogenase 517819 5318880 Smed_4057 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001312797.1 516518 R 366394 CDS YP_001312798.1 150376202 5318881 complement(517850..521068) 1 NC_009620.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMb20079 putative hemolysin-adenlyate cyclase protein; Hemolysin-type calcium-binding protein 521068 5318881 Smed_4058 Sinorhizobium medicae WSM419 Hemolysin-type calcium-binding protein YP_001312798.1 517850 R 366394 CDS YP_001312799.1 150376203 5318882 complement(521724..522362) 1 NC_009620.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMb20078 putative nitratenitrite response regulator protein; two component LuxR family transcriptional regulator 522362 5318882 Smed_4059 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001312799.1 521724 R 366394 CDS YP_001312800.1 150376204 5318883 complement(522359..524017) 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sme:SMb20077 putative sensor histidine kinase protein; integral membrane sensor signal transduction histidine kinase 524017 5318883 Smed_4060 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001312800.1 522359 R 366394 CDS YP_001312801.1 150376205 5317890 complement(524152..525165) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20076 short chain dehydrogenase; short chain dehydrogenase 525165 5317890 Smed_4061 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001312801.1 524152 R 366394 CDS YP_001312802.1 150376206 5317891 complement(525241..525432) 1 NC_009620.1 KEGG: sme:SMb20075 hypothetical protein; hypothetical protein 525432 5317891 Smed_4062 Sinorhizobium medicae WSM419 hypothetical protein YP_001312802.1 525241 R 366394 CDS YP_001312803.1 150376207 5317892 complement(525478..525720) 1 NC_009620.1 KEGG: sme:SMb20074 hypothetical protein; hypothetical protein 525720 5317892 Smed_4063 Sinorhizobium medicae WSM419 hypothetical protein YP_001312803.1 525478 R 366394 CDS YP_001312804.1 150376208 5317893 525933..526790 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20073 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 526790 5317893 Smed_4064 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312804.1 525933 D 366394 CDS YP_001312805.1 150376209 5317894 526996..527913 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20072 putative rhizopine binding protein; periplasmic binding protein/LacI transcriptional regulator 527913 5317894 Smed_4065 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001312805.1 526996 D 366394 CDS YP_001312806.1 150376210 5317895 528304..529494 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20071 putative efflux protein; major facilitator transporter 529494 5317895 Smed_4066 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312806.1 528304 D 366394 CDS YP_001312807.1 150376211 5317896 529696..531204 1 NC_009620.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sme:SMb20070 putative sulfate permease protein; sulfate transporter 531204 5317896 Smed_4067 Sinorhizobium medicae WSM419 sulfate transporter YP_001312807.1 529696 D 366394 CDS YP_001312808.1 150376212 5317897 531330..532559 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: mes:Meso_1534 major facilitator superfamily MFS_1; major facilitator transporter 532559 5317897 Smed_4068 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312808.1 531330 D 366394 CDS YP_001312809.1 150376213 5317898 complement(532571..532780) 1 NC_009620.1 PFAM: protein of unknown function DUF1458; KEGG: sme:SMb20068 hypothetical protein; hypothetical protein 532780 5317898 Smed_4069 Sinorhizobium medicae WSM419 hypothetical protein YP_001312809.1 532571 R 366394 CDS YP_001312810.1 150376214 5317899 533031..533609 1 NC_009620.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: sme:SMb21380 putative dioxygenase, slightly similar to catechol 1,2-dioxygenase protein; intradiol ring-cleavage dioxygenase 533609 5317899 Smed_4070 Sinorhizobium medicae WSM419 intradiol ring-cleavage dioxygenase YP_001312810.1 533031 D 366394 CDS YP_001312811.1 150376215 5318937 complement(533647..533832) 1 NC_009620.1 KEGG: sme:SMb20066 hypothetical protein; hypothetical protein 533832 5318937 Smed_4071 Sinorhizobium medicae WSM419 hypothetical protein YP_001312811.1 533647 R 366394 CDS YP_001312812.1 150376216 5318938 534033..534797 1 NC_009620.1 KEGG: ret:RHE_CH02153 hypothetical protein; hypothetical protein 534797 5318938 Smed_4072 Sinorhizobium medicae WSM419 hypothetical protein YP_001312812.1 534033 D 366394 CDS YP_001312813.1 150376217 5318939 534802..535206 1 NC_009620.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rru:Rru_A2242 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 535206 5318939 Smed_4073 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001312813.1 534802 D 366394 CDS YP_001312814.1 150376218 5318940 complement(535254..535652) 1 NC_009620.1 KEGG: sme:SMb20065 hypothetical protein; hypothetical protein 535652 5318940 Smed_4074 Sinorhizobium medicae WSM419 hypothetical protein YP_001312814.1 535254 R 366394 CDS YP_001312815.1 150376219 5318941 complement(536095..536784) 1 NC_009620.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMa0376 putative hydrolase; isochorismatase hydrolase 536784 5318941 Smed_4075 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001312815.1 536095 R 366394 CDS YP_001312816.1 150376220 5318942 complement(536925..537857) 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_L_1752 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 537857 5318942 Smed_4076 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001312816.1 536925 R 366394 CDS YP_001312817.1 150376221 5318943 537976..538875 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_1754 hypothetical protein; LysR family transcriptional regulator 538875 5318943 Smed_4077 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312817.1 537976 D 366394 CDS YP_001312818.1 150376222 5318944 complement(538967..539746) 1 NC_009620.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb20059 hypothetical protein; type 11 methyltransferase 539746 5318944 Smed_4078 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001312818.1 538967 R 366394 CDS YP_001312819.1 150376223 5318945 complement(539751..540557) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20058 putative ABC transporter ATP-binding protein; ABC transporter-like protein 540557 5318945 Smed_4079 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312819.1 539751 R 366394 CDS YP_001312820.1 150376224 5318946 complement(540554..541597) 1 NC_009620.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMb20057 putative ABC transporter permease protein; transport system permease 541597 5318946 Smed_4080 Sinorhizobium medicae WSM419 transport system permease YP_001312820.1 540554 R 366394 CDS YP_001312821.1 150376225 5317900 complement(541594..542697) 1 NC_009620.1 PFAM: periplasmic binding protein; KEGG: sme:SMb20056 putative ABC transporter periplasmic solute-binding protein; periplasmic binding protein 542697 5317900 Smed_4081 Sinorhizobium medicae WSM419 periplasmic binding protein YP_001312821.1 541594 R 366394 CDS YP_001312822.1 150376226 5317901 complement(543503..543886) 1 NC_009620.1 hypothetical protein 543886 5317901 Smed_4082 Sinorhizobium medicae WSM419 hypothetical protein YP_001312822.1 543503 R 366394 CDS YP_001312823.1 150376227 5317902 complement(544377..545402) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMb20055 putative transcriptional regulator protein; AraC family transcriptional regulator 545402 5317902 Smed_4083 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001312823.1 544377 R 366394 CDS YP_001312824.1 150376228 5317903 545675..546379 1 NC_009620.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20054 putative non-heme chloroperoxidase protein; chloride peroxidase 546379 5317903 Smed_4084 Sinorhizobium medicae WSM419 chloride peroxidase YP_001312824.1 545675 D 366394 CDS YP_001312825.1 150376229 5317904 546564..546881 1 NC_009620.1 KEGG: sme:SMb20050 hypothetical protein; hypothetical protein 546881 5317904 Smed_4085 Sinorhizobium medicae WSM419 hypothetical protein YP_001312825.1 546564 D 366394 CDS YP_001312826.1 150376230 5317905 complement(546951..548912) 1 NC_009620.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 548912 5317905 Smed_4086 Sinorhizobium medicae WSM419 elongation factor G YP_001312826.1 546951 R 366394 CDS YP_001312827.1 150376231 5317906 complement(548997..549584) 1 NC_009620.1 PFAM: UbiC transcription regulator-associated domain protein; KEGG: sme:SMb20048 putative transcriptional regulator protein; UbiC transcription regulator-associated domain-containing protein 549584 5317906 Smed_4087 Sinorhizobium medicae WSM419 UbiC transcription regulator-associated domain-containing protein YP_001312827.1 548997 R 366394 CDS YP_001312828.1 150376232 5317907 complement(549897..550085) 1 NC_009620.1 KEGG: sme:SMb20047 hypothetical protein; hypothetical protein 550085 5317907 Smed_4088 Sinorhizobium medicae WSM419 hypothetical protein YP_001312828.1 549897 R 366394 CDS YP_001312829.1 150376233 5317908 550389..551585 1 NC_009620.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sme:SMb20046 probable replication protein A; cobyrinic acid ac-diamide synthase 551585 5317908 Smed_4089 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001312829.1 550389 D 366394 CDS YP_001312830.1 150376234 5318905 551589..552590 1 NC_009620.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: sme:SMb20045 probable replication protein B; parB-like partition protein 552590 5318905 Smed_4090 Sinorhizobium medicae WSM419 parB-like partition protein YP_001312830.1 551589 D 366394 CDS YP_001312831.1 150376235 5318906 552746..554059 1 NC_009620.1 PFAM: replication protein C; KEGG: sme:SMb20044 probable replication protein C; replication initiation protein RepC 554059 5318906 Smed_4091 Sinorhizobium medicae WSM419 replication initiation protein RepC YP_001312831.1 552746 D 366394 CDS YP_001312832.1 150376236 5318907 complement(554505..555347) 1 NC_009620.1 KEGG: sme:SMb20043 hypothetical protein; hypothetical protein 555347 5318907 Smed_4092 Sinorhizobium medicae WSM419 hypothetical protein YP_001312832.1 554505 R 366394 CDS YP_001312833.1 150376237 5318908 555788..556936 1 NC_009620.1 PFAM: protein of unknown function DUF1612; KEGG: sme:SMb20042 hypothetical protein; hypothetical protein 556936 5318908 Smed_4093 Sinorhizobium medicae WSM419 hypothetical protein YP_001312833.1 555788 D 366394 CDS YP_001312834.1 150376238 5318909 complement(556957..557487) 1 NC_009620.1 KEGG: sme:SMb20041 hypothetical protein; hypothetical protein 557487 5318909 Smed_4094 Sinorhizobium medicae WSM419 hypothetical protein YP_001312834.1 556957 R 366394 CDS YP_001312835.1 150376239 5318910 complement(557654..558514) 1 NC_009620.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMb20040 hypothetical protein transmembrane; hypothetical protein 558514 5318910 Smed_4095 Sinorhizobium medicae WSM419 hypothetical protein YP_001312835.1 557654 R 366394 CDS YP_001312836.1 150376240 5318911 558595..560019 1 NC_009620.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMb20039 putative transcriptional regulator protein; GntR family transcriptional regulator 560019 5318911 Smed_4096 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312836.1 558595 D 366394 CDS YP_001312837.1 150376241 5318912 560251..561489 1 NC_009620.1 KEGG: sme:SMb20032 hypothetical protein; hypothetical protein 561489 5318912 Smed_4097 Sinorhizobium medicae WSM419 hypothetical protein YP_001312837.1 560251 D 366394 CDS YP_001312838.1 150376242 5318913 complement(561556..562413) 1 NC_009620.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 562413 5318913 Smed_4098 Sinorhizobium medicae WSM419 RNA polymerase sigma factor SigJ YP_001312838.1 561556 R 366394 CDS YP_001312839.1 150376243 5318914 complement(562413..562886) 1 NC_009620.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMb20029 hypothetical protein; alkylhydroperoxidase 562886 5318914 Smed_4099 Sinorhizobium medicae WSM419 alkylhydroperoxidase YP_001312839.1 562413 R 366394 CDS YP_001312840.1 150376244 5318989 complement(563000..563383) 1 NC_009620.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: rsp:RSP_7395 transcriptional regulator, MerR family; MerR family transcriptional regulator 563383 5318989 Smed_4100 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001312840.1 563000 R 366394 CDS YP_001312841.1 150376245 5318990 563462..564277 1 NC_009620.1 KEGG: bur:Bcep18194_A5272 hypothetical protein; hypothetical protein 564277 5318990 Smed_4101 Sinorhizobium medicae WSM419 hypothetical protein YP_001312841.1 563462 D 366394 CDS YP_001312842.1 150376246 5318991 complement(564366..565871) 1 NC_009620.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: sme:SMb20027 hypothetical protein; hypothetical protein 565871 5318991 Smed_4102 Sinorhizobium medicae WSM419 hypothetical protein YP_001312842.1 564366 R 366394 CDS YP_001312843.1 150376247 5318992 complement(565982..566443) 1 NC_009620.1 PFAM: protein of unknown function DUF1468; KEGG: sme:SMb20026 hypothetical protein; hypothetical protein 566443 5318992 Smed_4103 Sinorhizobium medicae WSM419 hypothetical protein YP_001312843.1 565982 R 366394 CDS YP_001312844.1 150376248 5318993 complement(566649..567626) 1 NC_009620.1 PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20025 hypothetical protein; hypothetical protein 567626 5318993 Smed_4104 Sinorhizobium medicae WSM419 hypothetical protein YP_001312844.1 566649 R 366394 CDS YP_001312845.1 150376249 5318994 complement(567972..568754) 1 NC_009620.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sme:SMb20024 pseudouridylate synthase; pseudouridine synthase 568754 5318994 Smed_4105 Sinorhizobium medicae WSM419 pseudouridine synthase YP_001312845.1 567972 R 366394 CDS YP_001312846.1 150376250 5318995 568942..572580 1 NC_009620.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: sme:SMb20023 N-methylhydantoinase / 5-oxoprolinase (ATP-hydrolysing); 5-oxoprolinase 572580 5318995 Smed_4106 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001312846.1 568942 D 366394 CDS YP_001312847.1 150376251 5318996 complement(572611..573177) 1 NC_009620.1 PFAM: dienelactone hydrolase; KEGG: sme:SMb20022 hypothetical protein; dienelactone hydrolase 573177 5318996 Smed_4107 Sinorhizobium medicae WSM419 dienelactone hydrolase YP_001312847.1 572611 R 366394 CDS YP_001312848.1 150376252 5318997 complement(573413..573784) 1 NC_009620.1 hypothetical protein 573784 5318997 Smed_4108 Sinorhizobium medicae WSM419 hypothetical protein YP_001312848.1 573413 R 366394 CDS YP_001312849.1 150376253 5318998 complement(573829..574296) 1 NC_009620.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMb20021 putative transcriptional regulator protein; AsnC family transcriptional regulator 574296 5318998 Smed_4109 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001312849.1 573829 R 366394 CDS YP_001312850.1 150376254 5318545 574417..576495 1 NC_009620.1 PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: sme:SMb20020 putative pyruvate dehydrogenase E1 component,alpha and beta subunits protein; transketolase domain-containing protein 576495 5318545 Smed_4110 Sinorhizobium medicae WSM419 transketolase domain-containing protein YP_001312850.1 574417 D 366394 CDS YP_001312851.1 150376255 5318546 576499..577659 1 NC_009620.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sme:SMb20019 putative dihydrolipoamide succinyltransferase protein; dihydrolipoyllysine-residue succinyltransferase 577659 5318546 Smed_4111 Sinorhizobium medicae WSM419 dihydrolipoyllysine-residue succinyltransferase YP_001312851.1 576499 D 366394 CDS YP_001312852.1 150376256 5318547 577735..578757 1 NC_009620.1 KEGG: sme:SMb20018 putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter; putative sugar ABC transporter periplasmic sugar-binding protei 578757 5318547 Smed_4112 Sinorhizobium medicae WSM419 putative sugar ABC transporter periplasmic sugar-binding protei YP_001312852.1 577735 D 366394 CDS YP_001312853.1 150376257 5318548 578954..580510 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20017 putative sugar ABC transporter ATP-binding protein ABC transporter; ABC transporter-like protein 580510 5318548 Smed_4113 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312853.1 578954 D 366394 CDS YP_001312854.1 150376258 5318549 580511..581503 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20016 putative sugar ABC transporter permease protein ABC transporter; monosaccharide-transporting ATPase 581503 5318549 Smed_4114 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312854.1 580511 D 366394 CDS YP_001312855.1 150376259 5318550 581500..582456 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20015 putative sugar ABC transporter permease protein ABC transporter; monosaccharide-transporting ATPase 582456 5318550 Smed_4115 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001312855.1 581500 D 366394 CDS YP_001312856.1 150376260 5318551 582453..583457 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20014 putative transcriptional regulator protein; alanine racemase 583457 5318551 Smed_4116 Sinorhizobium medicae WSM419 alanine racemase YP_001312856.1 582453 D 366394 CDS YP_001312857.1 150376261 5318552 583514..584758 1 NC_009620.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMb20013 hypothetical protein; oxidoreductase domain-containing protein 584758 5318552 Smed_4117 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001312857.1 583514 D 366394 CDS YP_001312858.1 150376262 5318554 complement(585614..585913) 1 NC_009620.1 hypothetical protein 585913 5318554 Smed_4119 Sinorhizobium medicae WSM419 hypothetical protein YP_001312858.1 585614 R 366394 CDS YP_001312859.1 150376263 5319313 586006..588549 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Vitamin K epoxide reductase; Male sterility domain; KEGG: sme:SMb20012 hypothetical protein; vitamin K epoxide reductase 588549 5319313 Smed_4120 Sinorhizobium medicae WSM419 vitamin K epoxide reductase YP_001312859.1 586006 D 366394 CDS YP_001312860.1 150376264 5319314 complement(588581..589360) 1 NC_009620.1 PFAM: zinc/iron permease; KEGG: sme:SMb20011 zinc transporter, ZIP family; zinc/iron permease 589360 5319314 Smed_4121 Sinorhizobium medicae WSM419 zinc/iron permease YP_001312860.1 588581 R 366394 CDS YP_001312861.1 150376265 5319315 complement(589394..590461) 1 NC_009620.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 590461 ligC 5319315 ligC Sinorhizobium medicae WSM419 ATP-dependent DNA ligase YP_001312861.1 589394 R 366394 CDS YP_001312862.1 150376266 5319316 complement(590487..592604) 1 NC_009620.1 PFAM: Catalase domain protein; KEGG: sme:SMb20007 probable catalase C protein; catalase 592604 5319316 Smed_4123 Sinorhizobium medicae WSM419 catalase YP_001312862.1 590487 R 366394 CDS YP_001312863.1 150376267 5319317 complement(592829..593749) 1 NC_009620.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sme:SMb20006 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 593749 5319317 Smed_4124 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001312863.1 592829 R 366394 CDS YP_001312864.1 150376268 5319318 complement(593942..594553) 1 NC_009620.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMb20005 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 594553 5319318 Smed_4125 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001312864.1 593942 R 366394 CDS YP_001312865.1 150376269 5319319 594671..595576 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20004 putative GstR-like transcriptional regulator protein; LysR family transcriptional regulator 595576 5319319 Smed_4126 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312865.1 594671 D 366394 CDS YP_001312866.1 150376270 5319320 complement(595583..596359) 1 NC_009620.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 596359 5319320 Smed_4127 Sinorhizobium medicae WSM419 pyrroline-5-carboxylate reductase YP_001312866.1 595583 R 366394 CDS YP_001312867.1 150376271 5319321 596763..597104 1 NC_009620.1 KEGG: sme:SMa1635 hypothetical protein; hypothetical protein 597104 5319321 Smed_4128 Sinorhizobium medicae WSM419 hypothetical protein YP_001312867.1 596763 D 366394 CDS YP_001312868.1 150376272 5319322 complement(597614..597778) 1 NC_009620.1 KEGG: sme:SMa0121 hypothetical protein; hypothetical protein 597778 5319322 Smed_4129 Sinorhizobium medicae WSM419 hypothetical protein YP_001312868.1 597614 R 366394 CDS YP_001312869.1 150376273 5319272 complement(597851..599485) 1 NC_009620.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth; chaperonin GroEL 599485 groEL 5319272 groEL Sinorhizobium medicae WSM419 chaperonin GroEL YP_001312869.1 597851 R 366394 CDS YP_001312870.1 150376274 5319274 complement(600107..601180) 1 NC_009620.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20002 probable lactose transport ATP-binding protein; ABC transporter-like protein 601180 5319274 Smed_4132 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312870.1 600107 R 366394 CDS YP_001312871.1 150376275 5319275 complement(601177..603441) 1 NC_009620.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sme:SMb21655 probable beta-galactosidase protein; glycoside hydrolase family protein 603441 5319275 Smed_4133 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001312871.1 601177 R 366394 CDS YP_001312872.1 150376276 5319276 complement(603450..604265) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21654 probable lactose uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 604265 5319276 Smed_4134 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312872.1 603450 R 366394 CDS YP_001312873.1 150376277 5319277 complement(604262..605161) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21653 probable lactose uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 605161 5319277 Smed_4135 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312873.1 604262 R 366394 CDS YP_001312874.1 150376278 5319278 complement(605247..606521) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21652 probable lactose uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 606521 5319278 Smed_4136 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312874.1 605247 R 366394 CDS YP_001312875.1 150376279 5319279 complement(606754..607833) 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21650 putative transcriptional regulator, LacI family protein; regulatory protein LacI 607833 5319279 Smed_4137 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001312875.1 606754 R 366394 CDS YP_001312876.1 150376280 5319280 complement(607902..608837) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMb21649 alpha-galactoside utilization transcriptional regulator, AraC family protein; AraC family transcriptional regulator 608837 5319280 Smed_4138 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001312876.1 607902 R 366394 CDS YP_001312877.1 150376281 5319281 609032..610504 1 NC_009620.1 PFAM: glycoside hydrolase family 4; KEGG: sme:SMb21648 alpha-galactosidase (melibiase) protein; glycoside hydrolase family protein 610504 5319281 Smed_4139 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001312877.1 609032 D 366394 CDS YP_001312878.1 150376282 5319136 610706..612787 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb21647 alpha-galactoside ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 612787 5319136 Smed_4140 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312878.1 610706 D 366394 CDS YP_001312879.1 150376283 5319137 612904..613917 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21646 putative ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 613917 5319137 Smed_4141 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312879.1 612904 D 366394 CDS YP_001312880.1 150376284 5319138 613914..615041 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21645 putative ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 615041 5319138 Smed_4142 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312880.1 613914 D 366394 CDS YP_001312881.1 150376285 5319139 615053..616723 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21644 putative ABC transporter ATP-binding protein; ABC transporter-like protein 616723 5319139 Smed_4143 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312881.1 615053 D 366394 CDS YP_001312882.1 150376286 5319140 616757..618130 1 NC_009620.1 PFAM: glycoside hydrolase family 4; KEGG: sme:SMb21643 probable alpha-galactosidase (melibiase) protein; glycoside hydrolase family protein 618130 5319140 Smed_4144 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001312882.1 616757 D 366394 CDS YP_001312883.1 150376287 5319141 618508..618852 1 NC_009620.1 PFAM: protein of unknown function DUF992; KEGG: sme:SMb21642 hypothetical protein; hypothetical protein 618852 5319141 Smed_4145 Sinorhizobium medicae WSM419 hypothetical protein YP_001312883.1 618508 D 366394 CDS YP_001312884.1 150376288 5319142 619137..620054 1 NC_009620.1 TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein domain; KEGG: sme:SMb21641 putative regulator of phenylacetic acid degradation, ArsR family protein; PaaX family transcriptional regulator 620054 5319142 Smed_4146 Sinorhizobium medicae WSM419 PaaX family transcriptional regulator YP_001312884.1 619137 D 366394 CDS YP_001312885.1 150376289 5319143 620238..621239 1 NC_009620.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 621239 paaA 5319143 paaA Sinorhizobium medicae WSM419 phenylacetate-CoA oxygenase subunit PaaA YP_001312885.1 620238 D 366394 CDS YP_001312886.1 150376290 5319144 621257..621541 1 NC_009620.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 621541 paaB 5319144 paaB Sinorhizobium medicae WSM419 phenylacetate-CoA oxygenase subunit PaaB YP_001312886.1 621257 D 366394 CDS YP_001312887.1 150376291 5319145 621541..622326 1 NC_009620.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: sme:SMb21638 putative phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaI 622326 5319145 Smed_4149 Sinorhizobium medicae WSM419 phenylacetate-CoA oxygenase subunit PaaI YP_001312887.1 621541 D 366394 CDS YP_001312888.1 150376292 5319199 622336..622860 1 NC_009620.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: sme:SMb21637 putative phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaJ 622860 5319199 Smed_4150 Sinorhizobium medicae WSM419 phenylacetate-CoA oxygenase subunit PaaJ YP_001312888.1 622336 D 366394 CDS YP_001312889.1 150376293 5319200 622883..623959 1 NC_009620.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMb21636 putative ferredoxin reductase electron transfer component protein; phenylacetate-CoA oxygenase/reductase subunit PaaK 623959 5319200 Smed_4151 Sinorhizobium medicae WSM419 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_001312889.1 622883 D 366394 CDS YP_001312890.1 150376294 5319201 623999..626059 1 NC_009620.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 626059 5319201 Smed_4152 Sinorhizobium medicae WSM419 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_001312890.1 623999 D 366394 CDS YP_001312891.1 150376295 5319202 626056..626559 1 NC_009620.1 PFAM: thioesterase superfamily protein; KEGG: sme:SMb21634 putative acyl-CoA thioester hydrolase protein; thioesterase superfamily protein 626559 5319202 Smed_4153 Sinorhizobium medicae WSM419 thioesterase superfamily protein YP_001312891.1 626056 D 366394 CDS YP_001312892.1 150376296 5319203 complement(626618..627409) 1 NC_009620.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 627409 5319203 Smed_4154 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001312892.1 626618 R 366394 CDS YP_001312893.1 150376297 5319204 627501..628829 1 NC_009620.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: sme:SMb21632 putative 3-hydroxyacyl-CoA dehydrogenase protein; 3-hydroxybutyryl-CoA epimerase 628829 5319204 Smed_4155 Sinorhizobium medicae WSM419 3-hydroxybutyryl-CoA epimerase YP_001312893.1 627501 D 366394 CDS YP_001312894.1 150376298 5319205 628974..630071 1 NC_009620.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sme:SMb21631 putative carboxynorspermidine decarboxylase protein; carboxynorspermidine decarboxylase 630071 5319205 Smed_4156 Sinorhizobium medicae WSM419 carboxynorspermidine decarboxylase YP_001312894.1 628974 D 366394 CDS YP_001312895.1 150376299 5319206 630112..631353 1 NC_009620.1 PFAM: Saccharopine dehydrogenase; KEGG: sme:SMb21630 hypothetical protein; saccharopine dehydrogenase 631353 5319206 Smed_4157 Sinorhizobium medicae WSM419 saccharopine dehydrogenase YP_001312895.1 630112 D 366394 CDS YP_001312896.1 150376300 5319207 631356..632606 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rle:RL4378 putative LacI family transcriptional regulator; alanine racemase 632606 5319207 Smed_4158 Sinorhizobium medicae WSM419 alanine racemase YP_001312896.1 631356 D 366394 CDS YP_001312897.1 150376301 5319208 632630..633895 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20634 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 633895 5319208 Smed_4159 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001312897.1 632630 D 366394 CDS YP_001312898.1 150376302 5319189 634021..634938 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20633 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 634938 5319189 Smed_4160 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312898.1 634021 D 366394 CDS YP_001312899.1 150376303 5319190 634935..635798 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20632 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 635798 5319190 Smed_4161 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001312899.1 634935 D 366394 CDS YP_001312900.1 150376304 5319191 635817..637739 1 NC_009620.1 PFAM: protein of unknown function DUF1680; KEGG: sme:SMb20631 hypothetical protein; hypothetical protein 637739 5319191 Smed_4162 Sinorhizobium medicae WSM419 hypothetical protein YP_001312900.1 635817 D 366394 CDS YP_001312901.1 150376305 5319192 637752..638837 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20630 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 638837 5319192 Smed_4163 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312901.1 637752 D 366394 CDS YP_001312902.1 150376306 5319193 complement(639077..639976) 1 NC_009620.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 639976 5319193 Smed_4164 Sinorhizobium medicae WSM419 chromosome replication initiation inhibitor protein YP_001312902.1 639077 R 366394 CDS YP_001312903.1 150376307 5319194 640071..640682 1 NC_009620.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rle:RL2856 putative transmembrane lysine/arginine export protein; lysine exporter protein LysE/YggA 640682 5319194 Smed_4165 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001312903.1 640071 D 366394 CDS YP_001312904.1 150376308 5319195 640761..641399 1 NC_009620.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll6377 threonine efflux protein; lysine exporter protein LysE/YggA 641399 5319195 Smed_4166 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001312904.1 640761 D 366394 CDS YP_001312905.1 150376309 5319196 641448..642338 1 NC_009620.1 PFAM: dihydrodipicolinate synthetase; KEGG: mlo:mll6376 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 642338 5319196 Smed_4167 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001312905.1 641448 D 366394 CDS YP_001312906.1 150376310 5319197 complement(642350..643339) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMb20626 putative transcriptional regulator, AraC family protein; helix-turn-helix domain-containing protein 643339 5319197 Smed_4168 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312906.1 642350 R 366394 CDS YP_001312907.1 150376311 5319198 643415..644620 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20625 drug:H+ antiporter-1, DHA1 family; major facilitator transporter 644620 5319198 Smed_4169 Sinorhizobium medicae WSM419 major facilitator transporter YP_001312907.1 643415 D 366394 CDS YP_001312908.1 150376312 5318579 complement(644887..645492) 1 NC_009620.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 645492 thiE 5318579 thiE Sinorhizobium medicae WSM419 thiamine-phosphate pyrophosphorylase YP_001312908.1 644887 R 366394 CDS YP_001312909.1 150376313 5318580 complement(645489..646262) 1 NC_009620.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 646262 thiG 5318580 thiG Sinorhizobium medicae WSM419 thiazole synthase YP_001312909.1 645489 R 366394 CDS YP_001312910.1 150376314 5318581 complement(646265..646462) 1 NC_009620.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 646462 5318581 Smed_4172 Sinorhizobium medicae WSM419 sulfur carrier protein ThiS YP_001312910.1 646265 R 366394 CDS YP_001312911.1 150376315 5318582 complement(646431..647435) 1 NC_009620.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb20616 putative thiamine biosynthesis oxidoreductase protein; glycine oxidase ThiO 647435 5318582 Smed_4173 Sinorhizobium medicae WSM419 glycine oxidase ThiO YP_001312911.1 646431 R 366394 CDS YP_001312912.1 150376316 5318583 complement(647437..649269) 1 NC_009620.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 649269 5318583 Smed_4174 Sinorhizobium medicae WSM419 thiamine biosynthesis protein ThiC YP_001312912.1 647437 R 366394 CDS YP_001312913.1 150376317 5318584 649675..651678 1 NC_009620.1 KEGG: sme:SMb20614 hypothetical protein; hypothetical protein 651678 5318584 Smed_4175 Sinorhizobium medicae WSM419 hypothetical protein YP_001312913.1 649675 D 366394 CDS YP_001312914.1 150376318 5318585 complement(651820..653178) 1 NC_009620.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMb20613 C4-dicarboxylate transport transcriptional regulatory protein; two component, sigma54 specific, Fis family transcriptional regulator 653178 5318585 Smed_4176 Sinorhizobium medicae WSM419 two component, sigma54 specific, Fis family transcriptional regulator YP_001312914.1 651820 R 366394 CDS YP_001312915.1 150376319 5318586 complement(653182..655044) 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMb20612 C4-dicarboxylate transport sensor protein; histidine kinase 655044 5318586 Smed_4177 Sinorhizobium medicae WSM419 histidine kinase YP_001312915.1 653182 R 366394 CDS YP_001312916.1 150376320 5318587 655239..656603 1 NC_009620.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 656603 5318587 Smed_4178 Sinorhizobium medicae WSM419 C4-dicarboxylate transporter DctA YP_001312916.1 655239 D 366394 CDS YP_001312917.1 150376321 5319345 complement(656696..657625) 1 NC_009620.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMb20610 putative two-component response regulator protein; response regulator receiver protein 657625 5319345 Smed_4179 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001312917.1 656696 R 366394 CDS YP_001312918.1 150376322 5319346 complement(657612..660992) 1 NC_009620.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMb20609 putative two-component sensor histidine kinase protein; integral membrane sensor hybrid histidine kinase 660992 5319346 Smed_4180 Sinorhizobium medicae WSM419 integral membrane sensor hybrid histidine kinase YP_001312918.1 657612 R 366394 CDS YP_001312919.1 150376323 5319347 661427..661765 1 NC_009620.1 PFAM: regulatory protein ArsR; KEGG: sme:SMb20608 putative transcriptional regulator, ArsR family protein; regulatory protein ArsR 661765 5319347 Smed_4181 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001312919.1 661427 D 366394 CDS YP_001312920.1 150376324 5319348 661797..662261 1 NC_009620.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMb20607 hypothetical protein; activator of Hsp90 ATPase 1 family protein 662261 5319348 Smed_4182 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001312920.1 661797 D 366394 CDS YP_001312921.1 150376325 5319349 662258..662707 1 NC_009620.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMb20606 hypothetical protein; glutathione-dependent formaldehyde-activating protein 662707 5319349 Smed_4183 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001312921.1 662258 D 366394 CDS YP_001312922.1 150376326 5319350 662918..664210 1 NC_009620.1 KEGG: sme:SMb20605 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor; ABC transporter periplasmic solute-binding protein 664210 5319350 Smed_4184 Sinorhizobium medicae WSM419 ABC transporter periplasmic solute-binding protein YP_001312922.1 662918 D 366394 CDS YP_001312923.1 150376327 5319351 664348..665961 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20604 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein, possibly fusion protein; inner-membrane translocator 665961 5319351 Smed_4185 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312923.1 664348 D 366394 CDS YP_001312924.1 150376328 5319352 665958..667124 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20603 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter permease protein; inner-membrane translocator 667124 5319352 Smed_4186 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312924.1 665958 D 366394 CDS YP_001312925.1 150376329 5319353 667130..667882 1 NC_009620.1 PFAM: ABC transporter related; KEGG: sme:SMb20602 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter ATP-binding protein; ABC transporter-like protein 667882 5319353 Smed_4187 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312925.1 667130 D 366394 CDS YP_001312926.1 150376330 5319354 667901..668596 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21707 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter ATP-binding protein; ABC transporter-like protein 668596 5319354 Smed_4188 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312926.1 667901 D 366394 CDS YP_001312927.1 150376331 5318947 668964..669359 1 NC_009620.1 KEGG: sme:SMb20600 hypothetical protein; hypothetical protein 669359 5318947 Smed_4189 Sinorhizobium medicae WSM419 hypothetical protein YP_001312927.1 668964 D 366394 CDS YP_001312928.1 150376332 5318948 complement(669451..670527) 1 NC_009620.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: sme:SMb20599 putative smb01f11-replication protein; parB-like partition protein 670527 5318948 Smed_4190 Sinorhizobium medicae WSM419 parB-like partition protein YP_001312928.1 669451 R 366394 CDS YP_001312929.1 150376333 5318949 complement(670531..671793) 1 NC_009620.1 PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: sme:SMb20598 probable replication protein; cobyrinic acid ac-diamide synthase 671793 5318949 Smed_4191 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001312929.1 670531 R 366394 CDS YP_001312930.1 150376334 5318950 complement(672152..672814) 1 NC_009620.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: atc:AGR_L_2979 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 672814 5318950 Smed_4192 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001312930.1 672152 R 366394 CDS YP_001312931.1 150376335 5318951 complement(672893..673987) 1 NC_009620.1 PFAM: protein of unknown function DUF949; KEGG: atc:AGR_L_2977 hypothetical protein; hypothetical protein 673987 5318951 Smed_4193 Sinorhizobium medicae WSM419 hypothetical protein YP_001312931.1 672893 R 366394 CDS YP_001312932.1 150376336 5318952 674323..677178 1 NC_009620.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: sme:SMb20595 putative cell division protein FtsK like protein; cell division protein FtsK 677178 5318952 Smed_4194 Sinorhizobium medicae WSM419 cell division protein FtsK YP_001312932.1 674323 D 366394 CDS YP_001312933.1 150376337 5318953 complement(677285..677602) 1 NC_009620.1 PFAM: blue (type 1) copper domain protein; KEGG: sme:SMb20594 putative amicyanin precursor protein; blue (type1) copper domain-containing protein 677602 5318953 Smed_4195 Sinorhizobium medicae WSM419 blue (type1) copper domain-containing protein YP_001312933.1 677285 R 366394 CDS YP_001312934.1 150376338 5318954 complement(677611..678135) 1 NC_009620.1 KEGG: sme:SMb20593 hypothetical protein; hypothetical protein 678135 5318954 Smed_4196 Sinorhizobium medicae WSM419 hypothetical protein YP_001312934.1 677611 R 366394 CDS YP_001312935.1 150376339 5318955 complement(678214..678885) 1 NC_009620.1 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 678885 5318955 Smed_4197 Sinorhizobium medicae WSM419 RNA polymerase sigma factor YP_001312935.1 678214 R 366394 CDS YP_001312936.1 150376340 5318956 679315..679599 1 NC_009620.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 679599 5318956 Smed_4198 Sinorhizobium medicae WSM419 acylphosphatase YP_001312936.1 679315 D 366394 CDS YP_001312937.1 150376341 5319094 complement(679796..681556) 1 NC_009620.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: sme:SMb20585 putative gamma-glutamyltranspeptidase protein; gamma-glutamyltransferase 681556 5319094 Smed_4199 Sinorhizobium medicae WSM419 gamma-glutamyltransferase YP_001312937.1 679796 R 366394 CDS YP_001312938.1 150376342 5319095 complement(681667..682329) 1 NC_009620.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sme:SMb20584 hypothetical protein; molybdopterin binding oxidoreductase 682329 5319095 Smed_4200 Sinorhizobium medicae WSM419 molybdopterin binding oxidoreductase YP_001312938.1 681667 R 366394 CDS YP_001312939.1 150376343 5319096 complement(682428..683309) 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL3904 putative AraC family transcriptional regulator for P-hydroxybenzoate hydroxylase; helix-turn-helix domain-containing protein 683309 5319096 Smed_4201 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001312939.1 682428 R 366394 CDS YP_001312940.1 150376344 5319097 683419..684591 1 NC_009620.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 684591 5319097 Smed_4202 Sinorhizobium medicae WSM419 4-hydroxybenzoate 3-monooxygenase YP_001312940.1 683419 D 366394 CDS YP_001312941.1 150376345 5319098 684697..685617 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20582 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 685617 5319098 Smed_4203 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312941.1 684697 D 366394 CDS YP_001312942.1 150376346 5319099 685750..687639 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20581 putative 4-hydroxyphenylpyruvate dioxygenase protein; xylose isomerase domain-containing protein 687639 5319099 Smed_4204 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001312942.1 685750 D 366394 CDS YP_001312943.1 150376347 5319100 complement(687665..688615) 1 NC_009620.1 TIGRFAM: pca operon transcription factor PcaQ; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20580 putative transcriptional activator of the pca operon, LysR family protein; LysR family transcriptional regulator 688615 5319100 Smed_4205 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001312943.1 687665 R 366394 CDS YP_001312944.1 150376348 5319101 688701..689507 1 NC_009620.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; Ndr family protein; KEGG: sme:SMb20579 putative beta-ketoadipate enol-lactone hydrolase protein; 3-oxoadipate enol-lactonase 689507 5319101 Smed_4206 Sinorhizobium medicae WSM419 3-oxoadipate enol-lactonase YP_001312944.1 688701 D 366394 CDS YP_001312945.1 150376349 5319102 689504..689911 1 NC_009620.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMb20578 putative gamma carboxymuconolactone decarboxylase protein; 4-carboxymuconolactone decarboxylase 689911 5319102 Smed_4207 Sinorhizobium medicae WSM419 4-carboxymuconolactone decarboxylase YP_001312945.1 689504 D 366394 CDS YP_001312946.1 150376350 5319103 689929..690690 1 NC_009620.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: sme:SMb20577 protocatechuate 3,4-dioxygenase, beta subunit; protocatechuate 3,4-dioxygenase subunit beta 690690 5319103 Smed_4208 Sinorhizobium medicae WSM419 protocatechuate 3,4-dioxygenase subunit beta YP_001312946.1 689929 D 366394 CDS YP_001312947.1 150376351 5319219 690701..691315 1 NC_009620.1 TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: sme:SMb20576 putative protocatechuate 3,4-dioxygenase alpha chain protein; protocatechuate 3,4-dioxygenase subunit alpha 691315 5319219 Smed_4209 Sinorhizobium medicae WSM419 protocatechuate 3,4-dioxygenase subunit alpha YP_001312947.1 690701 D 366394 CDS YP_001312948.1 150376352 5319220 691401..692456 1 NC_009620.1 Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase 692456 5319220 Smed_4210 Sinorhizobium medicae WSM419 3-carboxy-cis,cis-muconate cycloisomerase YP_001312948.1 691401 D 366394 CDS YP_001312949.1 150376353 5319221 complement(692536..695163) 1 NC_009620.1 KEGG: sme:SMb20574 putative maltooligosyl trehalose synthase protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; maltooligosyl trehalose synthase 695163 5319221 Smed_4211 Sinorhizobium medicae WSM419 maltooligosyl trehalose synthase YP_001312949.1 692536 R 366394 CDS YP_001312950.1 150376354 5319222 695344..695901 1 NC_009620.1 PFAM: NADPH-dependent FMN reductase; KEGG: sme:SMb20573 putative NADH-dependent FMN reductase protein; NADPH-dependent FMN reductase 695901 5319222 Smed_4212 Sinorhizobium medicae WSM419 NADPH-dependent FMN reductase YP_001312950.1 695344 D 366394 CDS YP_001312951.1 150376355 5319223 695936..697285 1 NC_009620.1 KEGG: sme:SMb21691 putative nitrilotriacetate monooxygenase component A protein; putative nitrilotriacetate monooxygenase component A protein 697285 5319223 Smed_4213 Sinorhizobium medicae WSM419 putative nitrilotriacetate monooxygenase component A protein YP_001312951.1 695936 D 366394 CDS YP_001312952.1 150376356 5319224 697302..698147 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20571 putative aliphatic sulfonate uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 698147 5319224 Smed_4214 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001312952.1 697302 D 366394 CDS YP_001312953.1 150376357 5319225 698195..699187 1 NC_009620.1 PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMb20570 putative aliphatic sulfonates uptake ABC transporter periplasmic solute-binding protein precursor; NMT1/THI5-like domain-containing protein 699187 5319225 Smed_4215 Sinorhizobium medicae WSM419 NMT1/THI5-like domain-containing protein YP_001312953.1 698195 D 366394 CDS YP_001312954.1 150376358 5319226 699198..699968 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20569 putative ABC transporter ATP-binding protein; ABC transporter-like protein 699968 5319226 Smed_4216 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312954.1 699198 D 366394 CDS YP_001312955.1 150376359 5319227 700245..701417 1 NC_009620.1 PFAM: Extracellular ligand-binding receptor; KEGG: sme:SMb20568 putative amino acid uptake ABC transporter solute-binding protein, LeuIle/Val-binding protein family; extracellular ligand-binding receptor 701417 5319227 Smed_4217 Sinorhizobium medicae WSM419 extracellular ligand-binding receptor YP_001312955.1 700245 D 366394 CDS YP_001312956.1 150376360 5319228 701534..702397 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20787 putative branched-chain amino acid uptake ABC transporter permease protein; inner-membrane translocator 702397 5319228 Smed_4218 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312956.1 701534 D 366394 CDS YP_001312957.1 150376361 5319293 702398..703405 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20786 putative branched-chain amino acid uptake ABC transporter permease protein; inner-membrane translocator 703405 5319293 Smed_4219 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001312957.1 702398 D 366394 CDS YP_001312958.1 150376362 5319294 703402..704166 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20785 putative branched-chain amino acid uptake ABC transporter ATP-binding protein; ABC transporter-like protein 704166 5319294 Smed_4220 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312958.1 703402 D 366394 CDS YP_001312959.1 150376363 5319295 704147..704872 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20784 putative branched-chain amino acid uptake ABC transporter ATP-binding protein; ABC transporter-like protein 704872 5319295 Smed_4221 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001312959.1 704147 D 366394 CDS YP_001312960.1 150376364 5319296 complement(704900..705664) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20773 putative transcriptional regulator, GntR family protein; GntR family transcriptional regulator 705664 5319296 Smed_4222 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312960.1 704900 R 366394 CDS YP_001312961.1 150376365 5319297 705785..706831 1 NC_009620.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 706831 pdxA 5319297 pdxA Sinorhizobium medicae WSM419 4-hydroxythreonine-4-phosphate dehydrogenase YP_001312961.1 705785 D 366394 CDS YP_001312962.1 150376366 5319298 706907..707893 1 NC_009620.1 PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20771 hypothetical protein; hypothetical protein 707893 5319298 Smed_4224 Sinorhizobium medicae WSM419 hypothetical protein YP_001312962.1 706907 D 366394 CDS YP_001312963.1 150376367 5319299 708000..708500 1 NC_009620.1 KEGG: sme:SMb20770 hypothetical protein; hypothetical protein 708500 5319299 Smed_4225 Sinorhizobium medicae WSM419 hypothetical protein YP_001312963.1 708000 D 366394 CDS YP_001312964.1 150376368 5319300 708535..710073 1 NC_009620.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: sme:SMb20769 hypothetical protein; hypothetical protein 710073 5319300 Smed_4226 Sinorhizobium medicae WSM419 hypothetical protein YP_001312964.1 708535 D 366394 CDS YP_001312965.1 150376369 5319301 710118..711059 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20768 hypothetical protein; xylose isomerase domain-containing protein 711059 5319301 Smed_4227 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001312965.1 710118 D 366394 CDS YP_001312966.1 150376370 5319302 711076..712794 1 NC_009620.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 712794 5319302 Smed_4228 Sinorhizobium medicae WSM419 dihydroxyacetone kinase YP_001312966.1 711076 D 366394 CDS YP_001312967.1 150376371 5318273 complement(712837..713451) 1 NC_009620.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sme:SMb20765 putative acetyltransferase protein; hexapaptide repeat-containing transferase 713451 5318273 Smed_4229 Sinorhizobium medicae WSM419 hexapaptide repeat-containing transferase YP_001312967.1 712837 R 366394 CDS YP_001312968.1 150376372 5318274 complement(713448..714155) 1 NC_009620.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20764 putative phosphonate uptake ABC transporter ATP-binding protein; phosphonate C-P lyase system protein PhnL 714155 5318274 Smed_4230 Sinorhizobium medicae WSM419 phosphonate C-P lyase system protein PhnL YP_001312968.1 713448 R 366394 CDS YP_001312969.1 150376373 5318275 complement(714218..714994) 1 NC_009620.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20763 putative phosphonate uptake ABC transporter ATP-binding protein; phosphonate C-P lyase system protein PhnK 714994 phnK 5318275 phnK Sinorhizobium medicae WSM419 phosphonate C-P lyase system protein PhnK YP_001312969.1 714218 R 366394 CDS YP_001312970.1 150376374 5318276 complement(714991..715884) 1 NC_009620.1 PFAM: phosphonate metabolism PhnJ; KEGG: sme:SMb20762 putative C-P (carbon-phosphorus) lyase component protein; phosphonate metabolism PhnJ 715884 5318276 Smed_4232 Sinorhizobium medicae WSM419 phosphonate metabolism PhnJ YP_001312970.1 714991 R 366394 CDS YP_001312971.1 150376375 5318277 complement(715881..716987) 1 NC_009620.1 PFAM: phosphonate metabolism; KEGG: sme:SMb20761 putative C-P (carbon-phosphorus) lyase component protein; phosphonate metabolism protein 716987 5318277 Smed_4233 Sinorhizobium medicae WSM419 phosphonate metabolism protein YP_001312971.1 715881 R 366394 CDS YP_001312972.1 150376376 5318278 complement(716992..717594) 1 NC_009620.1 PFAM: phosphonate metabolism; KEGG: sme:SMb20760 putative C-P (carbon-phosphorus) lyase component protein; carbon-phosphorus lyase complex subunit 717594 phnH 5318278 phnH Sinorhizobium medicae WSM419 carbon-phosphorus lyase complex subunit YP_001312972.1 716992 R 366394 CDS YP_001312973.1 150376377 5318279 complement(717594..718079) 1 NC_009620.1 PFAM: phosphonate metabolism PhnG; KEGG: sme:SMb20759 putative C-P (carbon-phosphorus lyase component protein; phosphonate metabolism PhnG 718079 5318279 Smed_4235 Sinorhizobium medicae WSM419 phosphonate metabolism PhnG YP_001312973.1 717594 R 366394 CDS YP_001312974.1 150376378 5318280 718194..718925 1 NC_009620.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMb20758 putative transcriptional regulator, GntR or ArsR family protein; GntR family transcriptional regulator 718925 5318280 Smed_4236 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001312974.1 718194 D 366394 CDS YP_001312975.1 150376379 5318281 complement(718931..721069) 1 NC_009620.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 721069 5318281 Smed_4237 Sinorhizobium medicae WSM419 methylmalonyl-CoA mutase YP_001312975.1 718931 R 366394 CDS YP_001312976.1 150376380 5318282 complement(721133..723145) 1 NC_009620.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: sme:SMb20756 putative propionyl-CoA carboxylase alpha chain protein; carbamoyl-phosphate synthase L chain ATP-binding 723145 5318282 Smed_4238 Sinorhizobium medicae WSM419 carbamoyl-phosphate synthase L chain ATP-binding YP_001312976.1 721133 R 366394 CDS YP_001312977.1 150376381 5318000 complement(723158..724690) 1 NC_009620.1 PFAM: carboxyl transferase; KEGG: sme:SMb20755 putative propionyl-CoA carboxylase beta chain protein; carboxyl transferase 724690 5318000 Smed_4239 Sinorhizobium medicae WSM419 carboxyl transferase YP_001312977.1 723158 R 366394 CDS YP_001312978.1 150376382 5318001 724843..726261 1 NC_009620.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: sme:SMb20754 hypothetical protein; hypothetical protein 726261 5318001 Smed_4240 Sinorhizobium medicae WSM419 hypothetical protein YP_001312978.1 724843 D 366394 CDS YP_001312979.1 150376383 5318002 726483..727631 1 NC_009620.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMb20753 putative acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 727631 5318002 Smed_4241 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001312979.1 726483 D 366394 CDS YP_001312980.1 150376384 5318003 727644..728714 1 NC_009620.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 728714 5318003 Smed_4242 Sinorhizobium medicae WSM419 3-hydroxyisobutyryl-CoA hydrolase YP_001312980.1 727644 D 366394 CDS YP_001312981.1 150376385 5318004 728767..729663 1 NC_009620.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMb20751 putative 3-hydroxyisobutyrate dehydrogenase protein; 3-hydroxyisobutyrate dehydrogenase 729663 5318004 Smed_4243 Sinorhizobium medicae WSM419 3-hydroxyisobutyrate dehydrogenase YP_001312981.1 728767 D 366394 CDS YP_001312982.1 150376386 5318005 complement(729685..730434) 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20750 putative dehydrogense, possibly gluconate 5-dehydrogenase protein; short-chain dehydrogenase/reductase SDR 730434 5318005 Smed_4244 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001312982.1 729685 R 366394 CDS YP_001312983.1 150376387 5318006 complement(730480..731940) 1 NC_009620.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sme:SMb20749 putative D-mannonate oxidoreductase protein; mannitol dehydrogenase domain-containing protein 731940 5318006 Smed_4245 Sinorhizobium medicae WSM419 mannitol dehydrogenase domain-containing protein YP_001312983.1 730480 R 366394 CDS YP_001312984.1 150376388 5318007 732514..733578 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20748 putative glycosyltransferase protein; glycosyl transferase family protein 733578 5318007 Smed_4246 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001312984.1 732514 D 366394 CDS YP_001312985.1 150376389 5318008 complement(733651..734700) 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rxy:Rxyl_2600 transcriptional regulator, LacI family; alanine racemase 734700 5318008 Smed_4247 Sinorhizobium medicae WSM419 alanine racemase YP_001312985.1 733651 R 366394 CDS YP_001312986.1 150376390 5318009 complement(734923..735948) 1 NC_009620.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc00340 putative oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 735948 5318009 Smed_4248 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001312986.1 734923 R 366394 CDS YP_001312987.1 150376391 5318462 736272..736946 1 NC_009620.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMb20747 hypothetical enzyme, haloacid dehalogenaseepoxide hydrolase family protein; HAD family hydrolase 736946 5318462 Smed_4249 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001312987.1 736272 D 366394 CDS YP_001312988.1 150376392 5318463 complement(736965..737150) 1 NC_009620.1 KEGG: sme:SMb20746 hypothetical protein; hypothetical protein 737150 5318463 Smed_4250 Sinorhizobium medicae WSM419 hypothetical protein YP_001312988.1 736965 R 366394 CDS YP_001312989.1 150376393 5318464 737657..738691 1 NC_009620.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sme:SMb20745 putative glutatmine synthetase II protein; glutamate--ammonia ligase 738691 5318464 Smed_4251 Sinorhizobium medicae WSM419 glutamate--ammonia ligase YP_001312989.1 737657 D 366394 CDS YP_001312990.1 150376394 5318465 738913..741507 1 NC_009620.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: atc:AGR_pAT_528 hypothetical protein; outer membrane autotransporter 741507 5318465 Smed_4252 Sinorhizobium medicae WSM419 outer membrane autotransporter YP_001312990.1 738913 D 366394 CDS YP_001312991.1 150376395 5318466 741517..742245 1 NC_009620.1 KEGG: xcb:XC_1509 hypothetical protein; hypothetical protein 742245 5318466 Smed_4253 Sinorhizobium medicae WSM419 hypothetical protein YP_001312991.1 741517 D 366394 CDS YP_001312992.1 150376396 5318467 complement(742454..742687) 1 NC_009620.1 KEGG: sme:SMb20727 hypothetical protein; hypothetical protein 742687 5318467 Smed_4254 Sinorhizobium medicae WSM419 hypothetical protein YP_001312992.1 742454 R 366394 CDS YP_001312993.1 150376397 5318468 complement(742765..744282) 1 NC_009620.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: sme:SMb20726 conserved hypothetical membrane protein; hypothetical protein 744282 5318468 Smed_4255 Sinorhizobium medicae WSM419 hypothetical protein YP_001312993.1 742765 R 366394 CDS YP_001312994.1 150376398 5318469 complement(744297..744788) 1 NC_009620.1 KEGG: sme:SMb20725 putative tricarboxylic transport membrane protein; putative tricarboxylic transport membrane protein 744788 5318469 Smed_4256 Sinorhizobium medicae WSM419 putative tricarboxylic transport membrane protein YP_001312994.1 744297 R 366394 CDS YP_001312995.1 150376399 5318470 complement(744785..745729) 1 NC_009620.1 PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20724 putative tricarboxylic transport membrane protein; hypothetical protein 745729 5318470 Smed_4257 Sinorhizobium medicae WSM419 hypothetical protein YP_001312995.1 744785 R 366394 CDS YP_001312996.1 150376400 5318471 complement(745965..747065) 1 NC_009620.1 KEGG: sme:SMb20723 putative iron ABC transporter periplasmic solute-binding protein precursor; putative iron ABC transporter periplasmic solute-binding protein 747065 5318471 Smed_4258 Sinorhizobium medicae WSM419 putative iron ABC transporter periplasmic solute-binding protein YP_001312996.1 745965 R 366394 CDS YP_001312997.1 150376401 5319010 747110..747787 1 NC_009620.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMb20722 putative two-component response regulator protein; two component transcriptional regulator 747787 5319010 Smed_4259 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001312997.1 747110 D 366394 CDS YP_001312998.1 150376402 5319011 747784..749178 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: sme:SMb20721 putative two-component sensor histidine kinase protein; integral membrane sensor signal transduction histidine kinase 749178 5319011 Smed_4260 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001312998.1 747784 D 366394 CDS YP_001312999.1 150376403 5319012 complement(749275..750225) 1 NC_009620.1 KEGG: sme:SMb20720 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; putative sugar uptake ABC transporter periplasmic solute-binding protein 750225 5319012 Smed_4261 Sinorhizobium medicae WSM419 putative sugar uptake ABC transporter periplasmic solute-binding protein YP_001312999.1 749275 R 366394 CDS YP_001313000.1 150376404 5319013 complement(750293..751303) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20719 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 751303 5319013 Smed_4262 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313000.1 750293 R 366394 CDS YP_001313001.1 150376405 5319014 complement(751380..752906) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20718 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 752906 5319014 Smed_4263 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313001.1 751380 R 366394 CDS YP_001313002.1 150376406 5319015 753175..754206 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20717 putative transcriptional regulator, LacI family protein; alanine racemase 754206 5319015 Smed_4264 Sinorhizobium medicae WSM419 alanine racemase YP_001313002.1 753175 D 366394 CDS YP_001313003.1 150376407 5319016 complement(754241..754465) 1 NC_009620.1 hypothetical protein 754465 5319016 Smed_4265 Sinorhizobium medicae WSM419 hypothetical protein YP_001313003.1 754241 R 366394 CDS YP_001313004.1 150376408 5319017 complement(754573..755598) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20714 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 755598 5319017 Smed_4266 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313004.1 754573 R 366394 CDS YP_001313005.1 150376409 5319018 complement(755696..757237) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20713 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 757237 5319018 Smed_4267 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313005.1 755696 R 366394 CDS YP_001313006.1 150376410 5319019 complement(757423..758352) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 758352 5319019 Smed_4268 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313006.1 757423 R 366394 CDS YP_001313007.1 150376411 5319031 complement(758589..759404) 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20711 putative Ioli protein; xylose isomerase domain-containing protein 759404 5319031 Smed_4269 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001313007.1 758589 R 366394 CDS YP_001313008.1 150376412 5319032 complement(759595..760482) 1 NC_009620.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMb20710 putative dehydrogenase protein; 3-hydroxyisobutyrate dehydrogenase 760482 5319032 Smed_4270 Sinorhizobium medicae WSM419 3-hydroxyisobutyrate dehydrogenase YP_001313008.1 759595 R 366394 CDS YP_001313009.1 150376413 5319033 complement(760529..761086) 1 NC_009620.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 761086 5319033 Smed_4271 Sinorhizobium medicae WSM419 3-methyladenine DNA glycosylase YP_001313009.1 760529 R 366394 CDS YP_001313010.1 150376414 5319034 761297..761848 1 NC_009620.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sme:SMb20708 putative methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 761848 5319034 Smed_4272 Sinorhizobium medicae WSM419 methylated-DNA--protein-cysteine methyltransferase YP_001313010.1 761297 D 366394 CDS YP_001313011.1 150376415 5319035 761850..763115 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMb20707 putative adenylate cyclase protein; putative adenylate/guanylate cyclase 763115 5319035 Smed_4273 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001313011.1 761850 D 366394 CDS YP_001313012.1 150376416 5319036 complement(763297..764073) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb20706 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 764073 5319036 Smed_4274 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313012.1 763297 R 366394 CDS YP_001313013.1 150376417 5319037 complement(764210..765205) 1 NC_009620.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMb20705 hypothetical protein; hypothetical protein 765205 5319037 Smed_4275 Sinorhizobium medicae WSM419 hypothetical protein YP_001313013.1 764210 R 366394 CDS YP_001313014.1 150376418 5319038 complement(765285..766745) 1 NC_009620.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 766745 glgA 5319038 glgA Sinorhizobium medicae WSM419 glycogen synthase YP_001313014.1 765285 R 366394 CDS YP_001313015.1 150376419 5319039 767306..767767 1 NC_009620.1 PFAM: PEBP family protein; KEGG: sme:SMb20703 hypothetical protein; PEBP family protein 767767 5319039 Smed_4277 Sinorhizobium medicae WSM419 PEBP family protein YP_001313015.1 767306 D 366394 CDS YP_001313016.1 150376420 5319040 767954..771037 1 NC_009620.1 TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rpa:RPA3316 possible chemotaxis cheB/cheR fusion protein; putative PAS/PAC sensor protein 771037 5319040 Smed_4278 Sinorhizobium medicae WSM419 putative PAS/PAC sensor protein YP_001313016.1 767954 D 366394 CDS YP_001313017.1 150376421 5319115 771047..771409 1 NC_009620.1 PFAM: response regulator receiver; KEGG: ret:RHE_PF00072 probable two-component response regulator protein; response regulator receiver protein 771409 5319115 Smed_4279 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001313017.1 771047 D 366394 CDS YP_001313018.1 150376422 5319116 complement(771438..773033) 1 NC_009620.1 PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; KEGG: sme:SMb20702 putative regulatory protein, possibly two-component response regulator; transcriptional regulator domain-containing protein 773033 5319116 Smed_4280 Sinorhizobium medicae WSM419 transcriptional regulator domain-containing protein YP_001313018.1 771438 R 366394 CDS YP_001313019.1 150376423 5319117 773358..774110 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sme:SMb20701 hypothetical protein; NmrA family protein 774110 5319117 Smed_4281 Sinorhizobium medicae WSM419 NmrA family protein YP_001313019.1 773358 D 366394 CDS YP_001313020.1 150376424 5319118 774189..774602 1 NC_009620.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20700 hypothetical protein; cupin 2 domain-containing protein 774602 5319118 Smed_4282 Sinorhizobium medicae WSM419 cupin 2 domain-containing protein YP_001313020.1 774189 D 366394 CDS YP_001313021.1 150376425 5319119 774688..775785 1 NC_009620.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMb20699 putative protein secretion protein, HlyD family, similar to E. coli EmrK; secretion protein HlyD family protein 775785 5319119 Smed_4283 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001313021.1 774688 D 366394 CDS YP_001313022.1 150376426 5319120 775782..777356 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb20698 putative transport protein, similar to E. coli multidrug resistance protein EmrB; major facilitator transporter 777356 5319120 Smed_4284 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313022.1 775782 D 366394 CDS YP_001313023.1 150376427 5319121 777581..779398 1 NC_009620.1 PFAM: peptidase M20; KEGG: sme:SMb20697 putative peptidase, similar to arginine utilization protein RocB; peptidase M20 779398 5319121 Smed_4285 Sinorhizobium medicae WSM419 peptidase M20 YP_001313023.1 777581 D 366394 CDS YP_001313024.1 150376428 5319122 779607..780854 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_3953 sugar ABC transporter, substrate-binding domain, putative; extracellular solute-binding protein 780854 5319122 Smed_4286 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313024.1 779607 D 366394 CDS YP_001313025.1 150376429 5319123 780963..781991 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_3700 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 781991 5319123 Smed_4287 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313025.1 780963 D 366394 CDS YP_001313026.1 150376430 5319124 782002..782883 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3950 putative sugar ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 782883 5319124 Smed_4288 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313026.1 782002 D 366394 CDS YP_001313027.1 150376431 5318452 782889..783953 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rde:RD1_3954 sugar ABC transporter, ATP-binding protein, putative; ABC transporter-like protein 783953 5318452 Smed_4289 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313027.1 782889 D 366394 CDS YP_001313028.1 150376432 5318453 784009..785316 1 NC_009620.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 785316 5318453 Smed_4290 Sinorhizobium medicae WSM419 histidinol dehydrogenase YP_001313028.1 784009 D 366394 CDS YP_001313029.1 150376433 5318454 785300..785437 1 NC_009620.1 hypothetical protein 785437 5318454 Smed_4291 Sinorhizobium medicae WSM419 hypothetical protein YP_001313029.1 785300 D 366394 CDS YP_001313030.1 150376434 5318455 785434..786198 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rde:RD1_3945 dehydrogenase; short-chain dehydrogenase/reductase SDR 786198 5318455 Smed_4292 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313030.1 785434 D 366394 CDS YP_001313031.1 150376435 5318456 786198..787226 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rde:RD1_3944 transcriptional regulatory protein, LacI family, putative; periplasmic binding protein/LacI transcriptional regulator 787226 5318456 Smed_4293 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313031.1 786198 D 366394 CDS YP_001313032.1 150376436 5318457 787292..788263 1 NC_009620.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rde:RD1_3942 cupin domain protein; cupin 788263 5318457 Smed_4294 Sinorhizobium medicae WSM419 cupin YP_001313032.1 787292 D 366394 CDS YP_001313033.1 150376437 5318458 788446..789141 1 NC_009620.1 KEGG: rde:RD1_3940 hypothetical protein; hypothetical protein 789141 5318458 Smed_4295 Sinorhizobium medicae WSM419 hypothetical protein YP_001313033.1 788446 D 366394 CDS YP_001313034.1 150376438 5318459 789336..790760 1 NC_009620.1 PFAM: Amidase; KEGG: syg:sync_2679 enantiomer-selective amidase; amidase 790760 5318459 Smed_4296 Sinorhizobium medicae WSM419 amidase YP_001313034.1 789336 D 366394 CDS YP_001313035.1 150376439 5318460 790851..791630 1 NC_009620.1 PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_4141 alpha/beta hydrolase protein; alpha/beta hydrolase fold protein 791630 5318460 Smed_4297 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001313035.1 790851 D 366394 CDS YP_001313036.1 150376440 5318461 791659..792837 1 NC_009620.1 PFAM: protein of unknown function DUF1486; KEGG: jan:Jann_4086 hypothetical protein; hypothetical protein 792837 5318461 Smed_4298 Sinorhizobium medicae WSM419 hypothetical protein YP_001313036.1 791659 D 366394 CDS YP_001313037.1 150376441 5319303 complement(793014..793787) 1 NC_009620.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMb20689 probable exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 793787 5319303 Smed_4299 Sinorhizobium medicae WSM419 exodeoxyribonuclease III Xth YP_001313037.1 793014 R 366394 CDS YP_001313038.1 150376442 5319304 complement(793795..794436) 1 NC_009620.1 KEGG: sme:SMb20688 hypothetical protein; hypothetical protein 794436 5319304 Smed_4300 Sinorhizobium medicae WSM419 hypothetical protein YP_001313038.1 793795 R 366394 CDS YP_001313039.1 150376443 5319305 complement(794438..795523) 1 NC_009620.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMb20687 hypothetical protein; hypothetical protein 795523 5319305 Smed_4301 Sinorhizobium medicae WSM419 hypothetical protein YP_001313039.1 794438 R 366394 CDS YP_001313040.1 150376444 5319306 complement(795523..796422) 1 NC_009620.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: sme:SMb20686 putative ATP-dependent DNA ligase protein; Ku family containing protein 796422 5319306 Smed_4302 Sinorhizobium medicae WSM419 Ku family containing protein YP_001313040.1 795523 R 366394 CDS YP_001313041.1 150376445 5319307 complement(796510..798963) 1 NC_009620.1 TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMb20685 hypothetical protein; DNA ligase D 798963 5319307 Smed_4303 Sinorhizobium medicae WSM419 DNA ligase D YP_001313041.1 796510 R 366394 CDS YP_001313042.1 150376446 5319308 complement(799037..799873) 1 NC_009620.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20684 hypothetical protein; hypothetical protein 799873 5319308 Smed_4304 Sinorhizobium medicae WSM419 hypothetical protein YP_001313042.1 799037 R 366394 CDS YP_001313043.1 150376447 5319309 800008..800892 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20683 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 800892 5319309 Smed_4305 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313043.1 800008 D 366394 CDS YP_001313044.1 150376448 5319310 801139..803187 1 NC_009620.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMc04171 putative hemolysin-type calcium-binding protein; Hemolysin-type calcium-binding protein 803187 5319310 Smed_4306 Sinorhizobium medicae WSM419 Hemolysin-type calcium-binding protein YP_001313044.1 801139 D 366394 CDS YP_001313045.1 150376449 5319311 complement(803330..804151) 1 NC_009620.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb20682 putative acetate operon repressor IclR protein; transcriptional regulator IclR 804151 5319311 Smed_4307 Sinorhizobium medicae WSM419 transcriptional regulator IclR YP_001313045.1 803330 R 366394 CDS YP_001313046.1 150376450 5319312 804315..806099 1 NC_009620.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 806099 5319312 Smed_4308 Sinorhizobium medicae WSM419 glyoxylate carboligase YP_001313046.1 804315 D 366394 CDS YP_001313047.1 150376451 5318884 806129..806944 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20680 putative hydroxypyruvate isomerase protein; hydroxypyruvate isomerase 806944 5318884 Smed_4309 Sinorhizobium medicae WSM419 hydroxypyruvate isomerase YP_001313047.1 806129 D 366394 CDS YP_001313048.1 150376452 5318885 806950..807834 1 NC_009620.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMb20679 putative tartronate semialdehyde reductase protein; 2-hydroxy-3-oxopropionate reductase 807834 5318885 Smed_4310 Sinorhizobium medicae WSM419 2-hydroxy-3-oxopropionate reductase YP_001313048.1 806950 D 366394 CDS YP_001313049.1 150376453 5318886 807941..809209 1 NC_009620.1 PFAM: MOFRL domain protein; KEGG: sme:SMb20678 putative hydroxypyruvate reductase protein; hydroxypyruvate reductase 809209 5318886 Smed_4311 Sinorhizobium medicae WSM419 hydroxypyruvate reductase YP_001313049.1 807941 D 366394 CDS YP_001313050.1 150376454 5318887 809257..809748 1 NC_009620.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 809748 5318887 Smed_4312 Sinorhizobium medicae WSM419 ureidoglycolate hydrolase YP_001313050.1 809257 D 366394 CDS YP_001313051.1 150376455 5318888 809826..810779 1 NC_009620.1 PFAM: protein of unknown function DUF930; KEGG: sme:SMb20676 hypothetical protein; hypothetical protein 810779 5318888 Smed_4313 Sinorhizobium medicae WSM419 hypothetical protein YP_001313051.1 809826 D 366394 CDS YP_001313052.1 150376456 5318889 810996..811571 1 NC_009620.1 PFAM: protein of unknown function DUF1349; KEGG: sme:SMb20675 hypothetical protein; hypothetical protein 811571 5318889 Smed_4314 Sinorhizobium medicae WSM419 hypothetical protein YP_001313052.1 810996 D 366394 CDS YP_001313053.1 150376457 5318890 complement(811607..812665) 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20674 putative transcriptional regulator, LacI family protein; periplasmic binding protein/LacI transcriptional regulator 812665 5318890 Smed_4315 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313053.1 811607 R 366394 CDS YP_001313054.1 150376458 5318891 812837..814423 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20673 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 814423 5318891 Smed_4316 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313054.1 812837 D 366394 CDS YP_001313055.1 150376459 5318892 814420..815742 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20672 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 815742 5318892 Smed_4317 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313055.1 814420 D 366394 CDS YP_001313056.1 150376460 5318893 815739..816707 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20671 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 816707 5318893 Smed_4318 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313056.1 815739 D 366394 CDS YP_001313057.1 150376461 5319168 complement(816886..818166) 1 NC_009620.1 PFAM: type III effector Hrp-dependent outers; KEGG: sme:SMb20670 hypothetical protein; Hrp-dependent type III effector protein 818166 5319168 Smed_4319 Sinorhizobium medicae WSM419 Hrp-dependent type III effector protein YP_001313057.1 816886 R 366394 CDS YP_001313058.1 150376462 5319169 complement(818170..818946) 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb20669 conserved hypothetical protein, possibly hydroxypyruvate isomerase; hydroxypyruvate isomerase 818946 5319169 Smed_4320 Sinorhizobium medicae WSM419 hydroxypyruvate isomerase YP_001313058.1 818170 R 366394 CDS YP_001313059.1 150376463 5319170 complement(818958..819878) 1 NC_009620.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sme:SMb20668 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 819878 5319170 Smed_4321 Sinorhizobium medicae WSM419 3-hydroxyisobutyrate dehydrogenase YP_001313059.1 818958 R 366394 CDS YP_001313060.1 150376464 5319171 820012..821016 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20667 putative transcriptional regulator, LacI family protein; regulatory protein LacI 821016 5319171 Smed_4322 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001313060.1 820012 D 366394 CDS YP_001313061.1 150376465 5319172 821032..821709 1 NC_009620.1 PFAM: class II aldolase/adducin family protein; KEGG: sme:SMb20666 hypothetical protein; putative aldolase 821709 5319172 Smed_4323 Sinorhizobium medicae WSM419 putative aldolase YP_001313061.1 821032 D 366394 CDS YP_001313062.1 150376466 5319173 821950..822732 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb20664 putative transcriptional regulator, GntR family protein; GntR family transcriptional regulator 822732 5319173 Smed_4324 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313062.1 821950 D 366394 CDS YP_001313063.1 150376467 5319174 822767..823750 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb20663 hypothetical protein; NAD-dependent epimerase/dehydratase 823750 5319174 Smed_4325 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001313063.1 822767 D 366394 CDS YP_001313064.1 150376468 5319175 823752..824528 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20662 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 824528 5319175 Smed_4326 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313064.1 823752 D 366394 CDS YP_001313065.1 150376469 5319176 824612..825679 1 NC_009620.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20661 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 825679 5319176 Smed_4327 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313065.1 824612 D 366394 CDS YP_001313066.1 150376470 5319177 825769..827073 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20660 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 827073 5319177 Smed_4328 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313066.1 825769 D 366394 CDS YP_001313067.1 150376471 5318087 827174..828103 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20659 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 828103 5318087 Smed_4329 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313067.1 827174 D 366394 CDS YP_001313068.1 150376472 5318088 828117..829016 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20658 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 829016 5318088 Smed_4330 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313068.1 828117 D 366394 CDS YP_001313069.1 150376473 5318089 complement(829024..829683) 1 NC_009620.1 KEGG: sme:SMb20657 hypothetical membrane protein; hypothetical protein 829683 5318089 Smed_4331 Sinorhizobium medicae WSM419 hypothetical protein YP_001313069.1 829024 R 366394 CDS YP_001313070.1 150376474 5318090 complement(829718..830635) 1 NC_009620.1 PFAM: aldo/keto reductase; KEGG: sme:SMb20656 putative oxidoreductase protein; aldo/keto reductase 830635 5318090 Smed_4332 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001313070.1 829718 R 366394 CDS YP_001313071.1 150376475 5318091 complement(831086..831391) 1 NC_009620.1 KEGG: sme:SMb20654 hypothetical protein; hypothetical protein 831391 5318091 Smed_4333 Sinorhizobium medicae WSM419 hypothetical protein YP_001313071.1 831086 R 366394 CDS YP_001313072.1 150376476 5318092 832116..834053 1 NC_009620.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: sme:SMb20652 putative asparagine synthetase protein; asparagine synthase 834053 5318092 Smed_4334 Sinorhizobium medicae WSM419 asparagine synthase YP_001313072.1 832116 D 366394 CDS YP_001313073.1 150376477 5318093 834081..834347 1 NC_009620.1 KEGG: sme:SMb20651 hypothetical protein; hypothetical protein 834347 5318093 Smed_4335 Sinorhizobium medicae WSM419 hypothetical protein YP_001313073.1 834081 D 366394 CDS YP_001313074.1 150376478 5318094 834375..835922 1 NC_009620.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMb20650 putative long-chain fatty-acid-CoA ligase protein; AMP-dependent synthetase and ligase 835922 5318094 Smed_4336 Sinorhizobium medicae WSM419 AMP-dependent synthetase and ligase YP_001313074.1 834375 D 366394 CDS YP_001313075.1 150376479 5318095 835919..836926 1 NC_009620.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 836926 nadE 5318095 nadE Sinorhizobium medicae WSM419 NAD synthetase YP_001313075.1 835919 D 366394 CDS YP_001313076.1 150376480 5318096 complement(837016..837315) 1 NC_009620.1 hypothetical protein 837315 5318096 Smed_4338 Sinorhizobium medicae WSM419 hypothetical protein YP_001313076.1 837016 R 366394 CDS YP_001313077.1 150376481 5319209 837793..838044 1 NC_009620.1 KEGG: sme:SMb20647 hypothetical protein; hypothetical protein 838044 5319209 Smed_4339 Sinorhizobium medicae WSM419 hypothetical protein YP_001313077.1 837793 D 366394 CDS YP_001313078.1 150376482 5319210 838320..839108 1 NC_009620.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 839108 minC 5319210 minC Sinorhizobium medicae WSM419 septum formation inhibitor YP_001313078.1 838320 D 366394 CDS YP_001313079.1 150376483 5319211 839204..840019 1 NC_009620.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sme:SMb21523 putative cell division inhibitor protein; septum site-determining protein MinD 840019 5319211 Smed_4341 Sinorhizobium medicae WSM419 septum site-determining protein MinD YP_001313079.1 839204 D 366394 CDS YP_001313080.1 150376484 5319212 840016..840279 1 NC_009620.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 840279 minE 5319212 minE Sinorhizobium medicae WSM419 cell division topological specificity factor MinE YP_001313080.1 840016 D 366394 CDS YP_001313081.1 150376485 5319213 840710..841183 1 NC_009620.1 KEGG: sme:SMb21521 hypothetical exported protein, glycine-rich; hypothetical protein 841183 5319213 Smed_4343 Sinorhizobium medicae WSM419 hypothetical protein YP_001313081.1 840710 D 366394 CDS YP_001313082.1 150376486 5319214 complement(841192..841851) 1 NC_009620.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMb21520 putative two-component response regulator protein; two component LuxR family transcriptional regulator 841851 5319214 Smed_4344 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001313082.1 841192 R 366394 CDS YP_001313083.1 150376487 5319215 complement(841848..843248) 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sme:SMb21519 putative two-component sensor histidine kinase protein; putative signal transduction histidine kinase 843248 5319215 Smed_4345 Sinorhizobium medicae WSM419 putative signal transduction histidine kinase YP_001313083.1 841848 R 366394 CDS YP_001313084.1 150376488 5319216 843534..844274 1 NC_009620.1 KEGG: sme:SMb21518 hypothetical protein; hypothetical protein 844274 5319216 Smed_4346 Sinorhizobium medicae WSM419 hypothetical protein YP_001313084.1 843534 D 366394 CDS YP_001313085.1 150376489 5319217 844298..845098 1 NC_009620.1 PFAM: EAL domain protein; KEGG: sme:SMb21517 hypothetical protein; diguanylate phosphodiesterase 845098 5319217 Smed_4347 Sinorhizobium medicae WSM419 diguanylate phosphodiesterase YP_001313085.1 844298 D 366394 CDS YP_001313086.1 150376490 5319218 845260..845991 1 NC_009620.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMb21516 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 845991 5319218 Smed_4348 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001313086.1 845260 D 366394 CDS YP_001313087.1 150376491 5318198 complement(845994..847109) 1 NC_009620.1 KEGG: sme:SMb21515 hypothetical protein; hypothetical protein 847109 5318198 Smed_4349 Sinorhizobium medicae WSM419 hypothetical protein YP_001313087.1 845994 R 366394 CDS YP_001313088.1 150376492 5318199 complement(847106..847948) 1 NC_009620.1 TIGRFAM: modification methylase, HemK family; PFAM: putative RNA methylase; methyltransferase small; KEGG: sme:SMb21514 putative modification methylase protein; HemK family modification methylase 847948 5318199 Smed_4350 Sinorhizobium medicae WSM419 HemK family modification methylase YP_001313088.1 847106 R 366394 CDS YP_001313089.1 150376493 5318200 848098..849405 1 NC_009620.1 PFAM: polysaccharide biosynthesis protein; KEGG: sme:SMb21513 putative cell-surface polysaccharide exporter protein, PST family; polysaccharide biosynthesis protein 849405 5318200 Smed_4351 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001313089.1 848098 D 366394 CDS YP_001313090.1 150376494 5318201 849402..850550 1 NC_009620.1 KEGG: sme:SMb21512 hypothetical membrane protein; hypothetical protein 850550 5318201 Smed_4352 Sinorhizobium medicae WSM419 hypothetical protein YP_001313090.1 849402 D 366394 CDS YP_001313091.1 150376495 5318202 850833..852446 1 NC_009620.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMb21506 putative auxiliar protein involved in export of cell surface polysaccharides, MPA1 family without cytosolic domain, slightly ExoP-like; lipopolysaccharide biosynthesis protein 852446 5318202 Smed_4353 Sinorhizobium medicae WSM419 lipopolysaccharide biosynthesis protein YP_001313091.1 850833 D 366394 CDS YP_001313092.1 150376496 5318203 852461..853792 1 NC_009620.1 PFAM: O-antigen polymerase; KEGG: sme:SMb21505 putative membrane protein, similar to Wzy-like polysaccharide polymerase ExoQ; O-antigen polymerase 853792 5318203 Smed_4354 Sinorhizobium medicae WSM419 O-antigen polymerase YP_001313092.1 852461 D 366394 CDS YP_001313093.1 150376497 5318204 853785..854540 1 NC_009620.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21504 putative protein, slightly similar to carbohydrate deacetylase; polysaccharide deacetylase 854540 5318204 Smed_4355 Sinorhizobium medicae WSM419 polysaccharide deacetylase YP_001313093.1 853785 D 366394 CDS YP_001313094.1 150376498 5318205 854551..855780 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21503 putative glycosyltransferase protein; group 1 glycosyl transferase 855780 5318205 Smed_4356 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313094.1 854551 D 366394 CDS YP_001313095.1 150376499 5318206 855905..857107 1 NC_009620.1 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: sme:SMb21502 putative glycosyltransferase protein; group 1 glycosyl transferase 857107 5318206 Smed_4357 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313095.1 855905 D 366394 CDS YP_001313096.1 150376500 5318207 857104..857493 1 NC_009620.1 KEGG: sme:SMb21501 hypothetical membrane protein; hypothetical protein 857493 5318207 Smed_4358 Sinorhizobium medicae WSM419 hypothetical protein YP_001313096.1 857104 D 366394 CDS YP_001313097.1 150376501 5318382 857527..858525 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb21500 putative glycosyltransferase protein; glycosyl transferase family protein 858525 5318382 Smed_4359 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313097.1 857527 D 366394 CDS YP_001313098.1 150376502 5318383 858522..860681 1 NC_009620.1 KEGG: sme:SMb21499 hypothetical protein; hypothetical protein 860681 5318383 Smed_4360 Sinorhizobium medicae WSM419 hypothetical protein YP_001313098.1 858522 D 366394 CDS YP_001313099.1 150376503 5318384 complement(860684..863881) 1 NC_009620.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sme:SMb21498 putative acriflavin resistence protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 863881 5318384 Smed_4361 Sinorhizobium medicae WSM419 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001313099.1 860684 R 366394 CDS YP_001313100.1 150376504 5318385 complement(863884..865005) 1 NC_009620.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMb21497 putative acriflavin resistance protein; RND family efflux transporter MFP subunit 865005 5318385 Smed_4362 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001313100.1 863884 R 366394 CDS YP_001313101.1 150376505 5318386 complement(865270..865602) 1 NC_009620.1 KEGG: sme:SMa0034 possible protease; putative protease 865602 5318386 Smed_4363 Sinorhizobium medicae WSM419 putative protease YP_001313101.1 865270 R 366394 CDS YP_001313102.1 150376506 5318388 866921..867382 1 NC_009620.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMb21493 putative transcriptional regulator, AsnC family protein; AsnC family transcriptional regulator 867382 5318388 Smed_4365 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001313102.1 866921 D 366394 CDS YP_001313103.1 150376507 5318389 867490..868068 1 NC_009620.1 PFAM: protein of unknown function DUF922; KEGG: sme:SMb21492 hypothetical protein; hypothetical protein 868068 5318389 Smed_4366 Sinorhizobium medicae WSM419 hypothetical protein YP_001313103.1 867490 D 366394 CDS YP_001313104.1 150376508 5318390 868304..868834 1 NC_009620.1 PFAM: protein of unknown function DUF992; KEGG: sme:SMb21491 hypothetical protein; hypothetical protein 868834 5318390 Smed_4367 Sinorhizobium medicae WSM419 hypothetical protein YP_001313104.1 868304 D 366394 CDS YP_001313105.1 150376509 5318391 complement(868854..869609) 1 NC_009620.1 PFAM: Surfeit locus 1 family protein; KEGG: rle:pRL110038 putative surfeit locus protein 1; Surfeit locus 1 family protein 869609 5318391 Smed_4368 Sinorhizobium medicae WSM419 Surfeit locus 1 family protein YP_001313105.1 868854 R 366394 CDS YP_001313106.1 150376510 5318392 complement(869711..870112) 1 NC_009620.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rle:pRL110039 putative cytochrome o ubiquinol oxidase protein CyoD; cytochrome o ubiquinol oxidase subunit IV 870112 5318392 Smed_4369 Sinorhizobium medicae WSM419 cytochrome o ubiquinol oxidase subunit IV YP_001313106.1 869711 R 366394 CDS YP_001313107.1 150376511 5317979 complement(870109..870741) 1 NC_009620.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMb21489 putative cytochrome o ubiquinol oxidase chain III protein; cytochrome o ubiquinol oxidase subunit III 870741 5317979 Smed_4370 Sinorhizobium medicae WSM419 cytochrome o ubiquinol oxidase subunit III YP_001313107.1 870109 R 366394 CDS YP_001313108.1 150376512 5317980 complement(870738..872747) 1 NC_009620.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: sme:SMb21488 putative cytochrome o ubiquinol oxidase chain I protein; cytochrome o ubiquinol oxidase subunit I 872747 5317980 Smed_4371 Sinorhizobium medicae WSM419 cytochrome o ubiquinol oxidase subunit I YP_001313108.1 870738 R 366394 CDS YP_001313109.1 150376513 5317981 complement(872900..874078) 1 NC_009620.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: sme:SMb21487 putative cytochrome o ubiquinol oxidase chain II protein; ubiquinol oxidase subunit II 874078 5317981 Smed_4372 Sinorhizobium medicae WSM419 ubiquinol oxidase subunit II YP_001313109.1 872900 R 366394 CDS YP_001313110.1 150376514 5317982 874380..875720 1 NC_009620.1 PFAM: General substrate transporter; KEGG: sme:SMb21486 putative metabolite transport protein; general substrate transporter 875720 5317982 Smed_4373 Sinorhizobium medicae WSM419 general substrate transporter YP_001313110.1 874380 D 366394 CDS YP_001313111.1 150376515 5317983 875900..876088 1 NC_009620.1 KEGG: rsp:RSP_0947 hypothetical protein; hypothetical protein 876088 5317983 Smed_4374 Sinorhizobium medicae WSM419 hypothetical protein YP_001313111.1 875900 D 366394 CDS YP_001313112.1 150376516 5317984 complement(876217..876477) 1 NC_009620.1 KEGG: sme:SMb21687 hypothetical protein; hypothetical protein 876477 5317984 Smed_4375 Sinorhizobium medicae WSM419 hypothetical protein YP_001313112.1 876217 R 366394 CDS YP_001313113.1 150376517 5317985 complement(876529..877050) 1 NC_009620.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMb21484 putative RNA polymerase sigma-E factor (sigma-24) protein; ECF subfamily RNA polymerase sigma-24 factor 877050 5317985 Smed_4376 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001313113.1 876529 R 366394 CDS YP_001313114.1 150376518 5317986 877294..877578 1 NC_009620.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMb21483 hypothetical protein; hypothetical protein 877578 5317986 Smed_4377 Sinorhizobium medicae WSM419 hypothetical protein YP_001313114.1 877294 D 366394 CDS YP_001313115.1 150376519 5317987 877703..877966 1 NC_009620.1 KEGG: sme:SMb21482 hypothetical protein; hypothetical protein 877966 5317987 Smed_4378 Sinorhizobium medicae WSM419 hypothetical protein YP_001313115.1 877703 D 366394 CDS YP_001313116.1 150376520 5317988 878268..878744 1 NC_009620.1 PFAM: CBS domain containing protein; KEGG: sme:SMb21481 hypothetical protein; signal-transduction protein 878744 5317988 Smed_4379 Sinorhizobium medicae WSM419 signal-transduction protein YP_001313116.1 878268 D 366394 CDS YP_001313117.1 150376521 5317989 878738..878998 1 NC_009620.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21480 hypothetical protein; hypothetical protein 878998 5317989 Smed_4380 Sinorhizobium medicae WSM419 hypothetical protein YP_001313117.1 878738 D 366394 CDS YP_001313118.1 150376522 5318351 complement(879047..879352) 1 NC_009620.1 KEGG: sme:SMb21479 hypothetical protein; hypothetical protein 879352 5318351 Smed_4381 Sinorhizobium medicae WSM419 hypothetical protein YP_001313118.1 879047 R 366394 CDS YP_001313119.1 150376523 5318352 complement(879687..880469) 1 NC_009620.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 880469 fabG 5318352 fabG Sinorhizobium medicae WSM419 3-ketoacyl-ACP reductase YP_001313119.1 879687 R 366394 CDS YP_001313120.1 150376524 5318353 complement(880466..880837) 1 NC_009620.1 KEGG: sme:SMb21473 hypothetical protein; hypothetical protein 880837 5318353 Smed_4383 Sinorhizobium medicae WSM419 hypothetical protein YP_001313120.1 880466 R 366394 CDS YP_001313121.1 150376525 5318354 complement(880905..881360) 1 NC_009620.1 PFAM: protein of unknown function DUF1452; KEGG: sme:SMb21472 hypothetical protein; hypothetical protein 881360 5318354 Smed_4384 Sinorhizobium medicae WSM419 hypothetical protein YP_001313121.1 880905 R 366394 CDS YP_001313122.1 150376526 5318355 complement(881461..881709) 1 NC_009620.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21471 hypothetical protein; hypothetical protein 881709 5318355 Smed_4385 Sinorhizobium medicae WSM419 hypothetical protein YP_001313122.1 881461 R 366394 CDS YP_001313123.1 150376527 5318356 complement(881687..881968) 1 NC_009620.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21470 hypothetical protein; hypothetical protein 881968 5318356 Smed_4386 Sinorhizobium medicae WSM419 hypothetical protein YP_001313123.1 881687 R 366394 CDS YP_001313124.1 150376528 5318357 complement(882020..882529) 1 NC_009620.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21469 hypothetical protein; hypothetical protein 882529 5318357 Smed_4387 Sinorhizobium medicae WSM419 hypothetical protein YP_001313124.1 882020 R 366394 CDS YP_001313125.1 150376529 5318358 882626..883723 1 NC_009620.1 PFAM: protein of unknown function DUF475; KEGG: sme:SMb21468 hypothetical protein; hypothetical protein 883723 5318358 Smed_4388 Sinorhizobium medicae WSM419 hypothetical protein YP_001313125.1 882626 D 366394 CDS YP_001313126.1 150376530 5318359 883930..884256 1 NC_009620.1 KEGG: sme:SMb21467 hypothetical protein; hypothetical protein 884256 5318359 Smed_4389 Sinorhizobium medicae WSM419 hypothetical protein YP_001313126.1 883930 D 366394 CDS YP_001313127.1 150376531 5318360 884516..886264 1 NC_009620.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21466 ABC transporter ATP-binding protein; type I secretion system ATPase 886264 5318360 Smed_4390 Sinorhizobium medicae WSM419 type I secretion system ATPase YP_001313127.1 884516 D 366394 CDS YP_001313128.1 150376532 5318361 886261..887577 1 NC_009620.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: sme:SMb21465 protein secretion protein, HlyD family; HlyD family type I secretion membrane fusion protein 887577 5318361 Smed_4391 Sinorhizobium medicae WSM419 HlyD family type I secretion membrane fusion protein YP_001313128.1 886261 D 366394 CDS YP_001313129.1 150376533 5319157 complement(887594..888367) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMb21464 putative transcriptional regulator, gntR family protein; GntR family transcriptional regulator 888367 5319157 Smed_4392 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313129.1 887594 R 366394 CDS YP_001313130.1 150376534 5319158 888570..889955 1 NC_009620.1 PFAM: glycoside hydrolase family 4; KEGG: sme:SMb21463 putative glycosyl hydrolase, probable 6-phospho-beta-glucosidases protein; glycoside hydrolase family protein 889955 5319158 Smed_4393 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001313130.1 888570 D 366394 CDS YP_001313131.1 150376535 5319159 889946..890905 1 NC_009620.1 PFAM: PfkB domain protein; KEGG: sme:SMb21462 putative sugar kinase protein; ribokinase-like domain-containing protein 890905 5319159 Smed_4394 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001313131.1 889946 D 366394 CDS YP_001313132.1 150376536 5319160 890916..892178 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21461 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 892178 5319160 Smed_4395 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313132.1 890916 D 366394 CDS YP_001313133.1 150376537 5319161 892367..893479 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21460 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 893479 5319161 Smed_4396 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313133.1 892367 D 366394 CDS YP_001313134.1 150376538 5319162 893476..894369 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21459 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 894369 5319162 Smed_4397 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313134.1 893476 D 366394 CDS YP_001313135.1 150376539 5319163 894374..895252 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21458 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 895252 5319163 Smed_4398 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313135.1 894374 D 366394 CDS YP_001313136.1 150376540 5319164 895487..895924 1 NC_009620.1 KEGG: sme:SMb21456 hypothetical protein; hypothetical protein 895924 5319164 Smed_4399 Sinorhizobium medicae WSM419 hypothetical protein YP_001313136.1 895487 D 366394 CDS YP_001313137.1 150376541 5319165 896185..897462 1 NC_009620.1 PFAM: protein of unknown function DUF763; KEGG: sme:SMb21455 hypothetical protein; hypothetical protein 897462 5319165 Smed_4400 Sinorhizobium medicae WSM419 hypothetical protein YP_001313137.1 896185 D 366394 CDS YP_001313138.1 150376542 5319166 897576..897845 1 NC_009620.1 KEGG: sme:SMb21454 hypothetical protein; hypothetical protein 897845 5319166 Smed_4401 Sinorhizobium medicae WSM419 hypothetical protein YP_001313138.1 897576 D 366394 CDS YP_001313139.1 150376543 5319167 897897..898091 1 NC_009620.1 hypothetical protein 898091 5319167 Smed_4402 Sinorhizobium medicae WSM419 hypothetical protein YP_001313139.1 897897 D 366394 CDS YP_001313140.1 150376544 5318116 complement(898088..898432) 1 NC_009620.1 KEGG: sme:SMb21452 hypothetical protein; hypothetical protein 898432 5318116 Smed_4403 Sinorhizobium medicae WSM419 hypothetical protein YP_001313140.1 898088 R 366394 CDS YP_001313141.1 150376545 5318117 898573..898788 1 NC_009620.1 hypothetical protein 898788 5318117 Smed_4404 Sinorhizobium medicae WSM419 hypothetical protein YP_001313141.1 898573 D 366394 CDS YP_001313142.1 150376546 5318118 complement(898827..899342) 1 NC_009620.1 KEGG: sme:SMb21450 hypothetical protein; hypothetical protein 899342 5318118 Smed_4405 Sinorhizobium medicae WSM419 hypothetical protein YP_001313142.1 898827 R 366394 CDS YP_001313143.1 150376547 5318119 899493..900215 1 NC_009620.1 KEGG: sme:SMb21449 probable glutathione S-transferase protein; putative glutathione S-transferase 900215 5318119 Smed_4406 Sinorhizobium medicae WSM419 putative glutathione S-transferase YP_001313143.1 899493 D 366394 CDS YP_001313144.1 150376548 5318120 complement(900219..900860) 1 NC_009620.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sme:SMb21448 putative DNA polymerase related protein; phage SPO1 DNA polymerase-like protein 900860 5318120 Smed_4407 Sinorhizobium medicae WSM419 phage SPO1 DNA polymerase-like protein YP_001313144.1 900219 R 366394 CDS YP_001313145.1 150376549 5318121 complement(900951..902756) 1 NC_009620.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMb21447 putative 1,4-alpha-glucan branching enzyme protein; malto-oligosyltrehalose trehalohydrolase 902756 5318121 Smed_4408 Sinorhizobium medicae WSM419 malto-oligosyltrehalose trehalohydrolase YP_001313145.1 900951 R 366394 CDS YP_001313146.1 150376550 5318122 902901..904988 1 NC_009620.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMb21446 probable glycosyl hydrolase protein; glycogen debranching protein GlgX 904988 5318122 Smed_4409 Sinorhizobium medicae WSM419 glycogen debranching protein GlgX YP_001313146.1 902901 D 366394 CDS YP_001313147.1 150376551 5318123 904990..906108 1 NC_009620.1 KEGG: sme:SMb21445 putative DNA topoisomerase I protein; putative DNA topoisomerase I protein 906108 5318123 Smed_4410 Sinorhizobium medicae WSM419 putative DNA topoisomerase I protein YP_001313147.1 904990 D 366394 CDS YP_001313148.1 150376552 5318124 complement(906237..906971) 1 NC_009620.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sme:SMb21444 osmotic sensory protein; transport-associated protein 906971 5318124 Smed_4411 Sinorhizobium medicae WSM419 transport-associated protein YP_001313148.1 906237 R 366394 CDS YP_001313149.1 150376553 5318125 907111..907302 1 NC_009620.1 KEGG: sme:SMb21443 hypothetical protein; hypothetical protein 907302 5318125 Smed_4412 Sinorhizobium medicae WSM419 hypothetical protein YP_001313149.1 907111 D 366394 CDS YP_001313150.1 150376554 5318126 907396..907704 1 NC_009620.1 KEGG: atc:AGR_C_2256 hypothetical protein; hypothetical protein 907704 5318126 Smed_4413 Sinorhizobium medicae WSM419 hypothetical protein YP_001313150.1 907396 D 366394 CDS YP_001313151.1 150376555 5318978 907763..908203 1 NC_009620.1 PFAM: CBS domain containing protein; KEGG: sme:SMb21441 putative inosine-5'-monophosphate dehydrogenase protein; hypothetical protein 908203 5318978 Smed_4414 Sinorhizobium medicae WSM419 hypothetical protein YP_001313151.1 907763 D 366394 CDS YP_001313152.1 150376556 5318979 908292..908651 1 NC_009620.1 hypothetical protein 908651 5318979 Smed_4415 Sinorhizobium medicae WSM419 hypothetical protein YP_001313152.1 908292 D 366394 CDS YP_001313153.1 150376557 5318980 complement(908796..909239) 1 NC_009620.1 KEGG: sme:SMb21440 hypothetical protein; hypothetical protein 909239 5318980 Smed_4416 Sinorhizobium medicae WSM419 hypothetical protein YP_001313153.1 908796 R 366394 CDS YP_001313154.1 150376558 5318981 complement(909645..910454) 1 NC_009620.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb21433 putative methyl-transferase, S-adenosyl-L-methionine (SAM)-MTase protein; type 11 methyltransferase 910454 5318981 Smed_4417 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001313154.1 909645 R 366394 CDS YP_001313155.1 150376559 5318982 910560..911693 1 NC_009620.1 PFAM: periplasmic binding protein; KEGG: atc:AGR_L_2862 putative iron complex transport system substrate-binding protein; periplasmic binding protein 911693 5318982 Smed_4418 Sinorhizobium medicae WSM419 periplasmic binding protein YP_001313155.1 910560 D 366394 CDS YP_001313156.1 150376560 5318983 911823..912890 1 NC_009620.1 PFAM: transport system permease protein; KEGG: sme:SMb21430 putative iron ABC transporter permease protein; transport system permease 912890 5318983 Smed_4419 Sinorhizobium medicae WSM419 transport system permease YP_001313156.1 911823 D 366394 CDS YP_001313157.1 150376561 5318984 912884..913645 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21429 putative iron ABC transporter ATP-binding protein; ABC transporter-like protein 913645 5318984 Smed_4420 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313157.1 912884 D 366394 CDS YP_001313158.1 150376562 5318986 914413..915852 1 NC_009620.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sme:SMb21415 putative oxidoreductase, oxygen dependent, FAD-dependent protein; FAD linked oxidase domain-containing protein 915852 5318986 Smed_4422 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001313158.1 914413 D 366394 CDS YP_001313159.1 150376563 5318987 915892..917313 1 NC_009620.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: sme:SMb21414 putative amino acid decarboxylase, pyridoxal-dependent protein; pyridoxal-dependent decarboxylase 917313 5318987 Smed_4423 Sinorhizobium medicae WSM419 pyridoxal-dependent decarboxylase YP_001313159.1 915892 D 366394 CDS YP_001313160.1 150376564 5318988 917452..917934 1 NC_009620.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: sme:SMb21413 hypothetical protein; calcium-binding EF-hand-containing protein 917934 5318988 Smed_4424 Sinorhizobium medicae WSM419 calcium-binding EF-hand-containing protein YP_001313160.1 917452 D 366394 CDS YP_001313161.1 150376565 5318138 918013..918384 1 NC_009620.1 PFAM: protein of unknown function DUF488; KEGG: sme:SMb21412 hypothetical protein; hypothetical protein 918384 5318138 Smed_4425 Sinorhizobium medicae WSM419 hypothetical protein YP_001313161.1 918013 D 366394 CDS YP_001313162.1 150376566 5318139 918727..919002 1 NC_009620.1 KEGG: rle:pRL120245 hypothetical protein; hypothetical protein 919002 5318139 Smed_4426 Sinorhizobium medicae WSM419 hypothetical protein YP_001313162.1 918727 D 366394 CDS YP_001313163.1 150376567 5318140 complement(919014..919835) 1 NC_009620.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb21410 putative methyltransferase, S-Adenosyl-L-methionine (SAM)-MTase protein; type 11 methyltransferase 919835 5318140 Smed_4427 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001313163.1 919014 R 366394 CDS YP_001313164.1 150376568 5318142 920296..920703 1 NC_009620.1 KEGG: reu:Reut_B5200 putative uncharacterized protein conserved in bacteria putative lipoprotein; hypothetical protein 920703 5318142 Smed_4429 Sinorhizobium medicae WSM419 hypothetical protein YP_001313164.1 920296 D 366394 CDS YP_001313165.1 150376569 5318143 920779..921045 1 NC_009620.1 hypothetical protein 921045 5318143 Smed_4430 Sinorhizobium medicae WSM419 hypothetical protein YP_001313165.1 920779 D 366394 CDS YP_001313166.1 150376570 5318144 921327..921812 1 NC_009620.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: sme:SMb20475 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 921812 5318144 Smed_4431 Sinorhizobium medicae WSM419 3-demethylubiquinone-9 3-methyltransferase YP_001313166.1 921327 D 366394 CDS YP_001313167.1 150376571 5318145 921809..922030 1 NC_009620.1 KEGG: sme:SMb20474 hypothetical protein; hypothetical protein 922030 5318145 Smed_4432 Sinorhizobium medicae WSM419 hypothetical protein YP_001313167.1 921809 D 366394 CDS YP_001313168.1 150376572 5318146 complement(922200..923093) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1782 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 923093 5318146 Smed_4433 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313168.1 922200 R 366394 CDS YP_001313169.1 150376573 5318147 923185..923625 1 NC_009620.1 PFAM: transmembrane pair domain protein; KEGG: sme:SMa1780 hypothetical protein; transmembrane pair domain-containing protein 923625 5318147 Smed_4434 Sinorhizobium medicae WSM419 transmembrane pair domain-containing protein YP_001313169.1 923185 D 366394 CDS YP_001313170.1 150376574 5317957 complement(923662..924642) 1 NC_009620.1 KEGG: sme:SMb20513 hypothetical protein; hypothetical protein 924642 5317957 Smed_4435 Sinorhizobium medicae WSM419 hypothetical protein YP_001313170.1 923662 R 366394 CDS YP_001313171.1 150376575 5317958 complement(924723..926021) 1 NC_009620.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMa1582 hypothetical protein; mechanosensitive ion channel MscS 926021 5317958 Smed_4436 Sinorhizobium medicae WSM419 mechanosensitive ion channel MscS YP_001313171.1 924723 R 366394 CDS YP_001313172.1 150376576 5317959 complement(926176..926556) 1 NC_009620.1 PFAM: protein of unknown function DUF1486; KEGG: sme:SMa1589 hypothetical protein; hypothetical protein 926556 5317959 Smed_4437 Sinorhizobium medicae WSM419 hypothetical protein YP_001313172.1 926176 R 366394 CDS YP_001313173.1 150376577 5317960 complement(927056..927502) 1 NC_009620.1 KEGG: sme:SMb21030 hypothetical protein; hypothetical protein 927502 5317960 Smed_4438 Sinorhizobium medicae WSM419 hypothetical protein YP_001313173.1 927056 R 366394 CDS YP_001313174.1 150376578 5317961 927566..927946 1 NC_009620.1 KEGG: rle:RL1066 putative transmembrane protein; hypothetical protein 927946 5317961 Smed_4439 Sinorhizobium medicae WSM419 hypothetical protein YP_001313174.1 927566 D 366394 CDS YP_001313175.1 150376579 5317962 complement(927949..928488) 1 NC_009620.1 KEGG: rle:RL1067 hypothetical protein; hypothetical protein 928488 5317962 Smed_4440 Sinorhizobium medicae WSM419 hypothetical protein YP_001313175.1 927949 R 366394 CDS YP_001313176.1 150376580 5317963 complement(928693..929424) 1 NC_009620.1 KEGG: rle:RL0486 hypothetical protein; hypothetical protein 929424 5317963 Smed_4441 Sinorhizobium medicae WSM419 hypothetical protein YP_001313176.1 928693 R 366394 CDS YP_001313177.1 150376581 5317964 complement(929421..929999) 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sco:SCO4454 transcriptional regulator; TetR family transcriptional regulator 929999 5317964 Smed_4442 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001313177.1 929421 R 366394 CDS YP_001313178.1 150376582 5317965 930097..930495 1 NC_009620.1 PFAM: protein of unknown function DUF1486; KEGG: mlo:mll8193 hypothetical protein; hypothetical protein 930495 5317965 Smed_4443 Sinorhizobium medicae WSM419 hypothetical protein YP_001313178.1 930097 D 366394 CDS YP_001313179.1 150376583 5317966 complement(930581..931090) 1 NC_009620.1 KEGG: ret:RHE_PE00376 hypothetical protein; hypothetical protein 931090 5317966 Smed_4444 Sinorhizobium medicae WSM419 hypothetical protein YP_001313179.1 930581 R 366394 CDS YP_001313180.1 150376584 5317967 complement(931087..931575) 1 NC_009620.1 PFAM: TspO/MBR family protein; KEGG: sme:SMa1079 TspO tryptophan rich sensory protein homologue; TspO and MBR like protein 931575 5317967 Smed_4445 Sinorhizobium medicae WSM419 TspO and MBR like protein YP_001313180.1 931087 R 366394 CDS YP_001313181.1 150376585 5318598 complement(931636..931860) 1 NC_009620.1 PFAM: protein of unknown function DUF378; KEGG: sme:SMa1078 hypothetical protein; hypothetical protein 931860 5318598 Smed_4446 Sinorhizobium medicae WSM419 hypothetical protein YP_001313181.1 931636 R 366394 CDS YP_001313182.1 150376586 5318599 complement(931889..932371) 1 NC_009620.1 PFAM: beta-Ig-H3/fasciclin; KEGG: sme:SMa1077 Nex18 symbiotically induced conserved protein; beta-Ig-H3/fasciclin 932371 5318599 Smed_4447 Sinorhizobium medicae WSM419 beta-Ig-H3/fasciclin YP_001313182.1 931889 R 366394 CDS YP_001313183.1 150376587 5318600 932533..933114 1 NC_009620.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_PE00372 hypothetical protein; XRE family transcriptional regulator 933114 5318600 Smed_4448 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313183.1 932533 D 366394 CDS YP_001313184.1 150376588 5318601 complement(933217..933840) 1 NC_009620.1 KEGG: sme:SMc01547 hypothetical protein; hypothetical protein 933840 5318601 Smed_4449 Sinorhizobium medicae WSM419 hypothetical protein YP_001313184.1 933217 R 366394 CDS YP_001313185.1 150376589 5318602 complement(934104..934997) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:bll6530 transcriptional regulatory protein; LysR family transcriptional regulator 934997 5318602 Smed_4450 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313185.1 934104 R 366394 CDS YP_001313186.1 150376590 5318603 935103..936311 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL110158 putative transcription regulatory protein; major facilitator transporter 936311 5318603 Smed_4451 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313186.1 935103 D 366394 CDS YP_001313187.1 150376591 5318604 936403..937482 1 NC_009620.1 KEGG: rle:pRL110145 hypothetical protein; hypothetical protein 937482 5318604 Smed_4452 Sinorhizobium medicae WSM419 hypothetical protein YP_001313187.1 936403 D 366394 CDS YP_001313188.1 150376592 5318605 937679..938869 1 NC_009620.1 PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: bxe:Bxe_B1954 hypothetical protein; carboxymuconolactone decarboxylase 938869 5318605 Smed_4453 Sinorhizobium medicae WSM419 carboxymuconolactone decarboxylase YP_001313188.1 937679 D 366394 CDS YP_001313189.1 150376593 5318606 938979..939389 1 NC_009620.1 KEGG: tde:TDE0356 hypothetical protein; hypothetical protein 939389 5318606 Smed_4454 Sinorhizobium medicae WSM419 hypothetical protein YP_001313189.1 938979 D 366394 CDS YP_001313190.1 150376594 5317926 939773..940009 1 NC_009620.1 KEGG: sme:SMc01546 hypothetical protein; hypothetical protein 940009 5317926 Smed_4456 Sinorhizobium medicae WSM419 hypothetical protein YP_001313190.1 939773 D 366394 CDS YP_001313191.1 150376595 5317927 940103..940462 1 NC_009620.1 KEGG: rle:RL1210 hypothetical protein; hypothetical protein 940462 5317927 Smed_4457 Sinorhizobium medicae WSM419 hypothetical protein YP_001313191.1 940103 D 366394 CDS YP_001313192.1 150376596 5317928 940735..940944 1 NC_009620.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:pRL110542 putative cold shock protein; cold-shock DNA-binding domain-containing protein 940944 5317928 Smed_4458 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001313192.1 940735 D 366394 CDS YP_001313193.1 150376597 5317929 941073..941297 1 NC_009620.1 KEGG: ret:RHE_CH00434 hypothetical protein; hypothetical protein 941297 5317929 Smed_4459 Sinorhizobium medicae WSM419 hypothetical protein YP_001313193.1 941073 D 366394 CDS YP_001313194.1 150376598 5317930 941347..941643 1 NC_009620.1 KEGG: atc:AGR_pAT_759 hypothetical protein; hypothetical protein 941643 5317930 Smed_4460 Sinorhizobium medicae WSM419 hypothetical protein YP_001313194.1 941347 D 366394 CDS YP_001313195.1 150376599 5317931 942197..942637 1 NC_009620.1 KEGG: sme:SMc00281 hypothetical signal peptide protein; putative signal peptide protein 942637 5317931 Smed_4461 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001313195.1 942197 D 366394 CDS YP_001313196.1 150376600 5317932 943475..943852 1 NC_009620.1 PFAM: helix-turn-helix domain protein; KEGG: noc:Noc_2930 transcriptional regulator, XRE family; XRE family transcriptional regulator 943852 5317932 Smed_4462 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313196.1 943475 D 366394 CDS YP_001313197.1 150376601 5317933 943842..945164 1 NC_009620.1 PFAM: HipA domain protein; KEGG: ppd:Ppro_0263 HipA domain protein; HipA domain-containing protein 945164 5317933 Smed_4463 Sinorhizobium medicae WSM419 HipA domain-containing protein YP_001313197.1 943842 D 366394 CDS YP_001313198.1 150376602 5317936 complement(945633..946418) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20904 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 946418 5317936 Smed_4465 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313198.1 945633 R 366394 CDS YP_001313199.1 150376603 5318168 complement(946433..947767) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20903 putative sugar uptake ABC transporter permease protein; inner-membrane translocator 947767 5318168 Smed_4466 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001313199.1 946433 R 366394 CDS YP_001313200.1 150376604 5318169 complement(947971..949008) 1 NC_009620.1 TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; KEGG: sme:SMb20902 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; D-xylose ABC transporter periplasmic substrate-binding protein 949008 5318169 Smed_4467 Sinorhizobium medicae WSM419 D-xylose ABC transporter periplasmic substrate-binding protein YP_001313200.1 947971 R 366394 CDS YP_001313201.1 150376605 5318170 949400..950611 1 NC_009620.1 KEGG: sme:SMb20901 putative transcriptional regulator protein; putative transcriptional regulator 950611 5318170 Smed_4468 Sinorhizobium medicae WSM419 putative transcriptional regulator YP_001313201.1 949400 D 366394 CDS YP_001313202.1 150376606 5318171 complement(950746..951738) 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb20899 hypothetical myo-inositol dehydrogenase protein; oxidoreductase domain-containing protein 951738 5318171 Smed_4469 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313202.1 950746 R 366394 CDS YP_001313203.1 150376607 5318172 952030..952284 1 NC_009620.1 KEGG: sme:SMb20898 hypothetical protein; hypothetical protein 952284 5318172 Smed_4470 Sinorhizobium medicae WSM419 hypothetical protein YP_001313203.1 952030 D 366394 CDS YP_001313204.1 150376608 5318173 complement(952288..952737) 1 NC_009620.1 KEGG: sme:SMb20897 hypothetical protein; hypothetical protein 952737 5318173 Smed_4471 Sinorhizobium medicae WSM419 hypothetical protein YP_001313204.1 952288 R 366394 CDS YP_001313205.1 150376609 5318174 complement(952800..953780) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20896 probable transcriptional regulator, LysR family, possibly activator of the expression of ChvE protein; LysR family transcriptional regulator 953780 5318174 Smed_4472 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313205.1 952800 R 366394 CDS YP_001313206.1 150376610 5318175 954054..955121 1 NC_009620.1 KEGG: sme:SMb20895 probable sugar uptake ABC transporter periplasmic solute-binding protein precursor; putative sugar uptake ABC transporter periplasmic solute-binding protein 955121 5318175 Smed_4473 Sinorhizobium medicae WSM419 putative sugar uptake ABC transporter periplasmic solute-binding protein YP_001313206.1 954054 D 366394 CDS YP_001313207.1 150376611 5318176 955315..956850 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20894 probable sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 956850 5318176 Smed_4474 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313207.1 955315 D 366394 CDS YP_001313208.1 150376612 5318177 956850..958064 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20893 probable sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 958064 5318177 Smed_4475 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313208.1 956850 D 366394 CDS YP_001313209.1 150376613 5318341 958211..959206 1 NC_009620.1 PFAM: protein of unknown function DUF1238; KEGG: sme:SMb20892 hypothetical protein; hypothetical protein 959206 5318341 Smed_4476 Sinorhizobium medicae WSM419 hypothetical protein YP_001313209.1 958211 D 366394 CDS YP_001313210.1 150376614 5318342 959217..960713 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20891 putative dehydrogenase, possibly aldehyde dehydrogenase protein; aldehyde dehydrogenase 960713 5318342 Smed_4477 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001313210.1 959217 D 366394 CDS YP_001313211.1 150376615 5318343 960818..962563 1 NC_009620.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 962563 5318343 Smed_4478 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001313211.1 960818 D 366394 CDS YP_001313212.1 150376616 5318344 962787..963467 1 NC_009620.1 KEGG: sme:SMb20889 hypothetical glycine-rich protein; hypothetical protein 963467 5318344 Smed_4479 Sinorhizobium medicae WSM419 hypothetical protein YP_001313212.1 962787 D 366394 CDS YP_001313213.1 150376617 5318345 complement(963611..964429) 1 NC_009620.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: sme:SMb20888 hypothetical protein; transglutaminase domain-containing protein 964429 5318345 Smed_4480 Sinorhizobium medicae WSM419 transglutaminase domain-containing protein YP_001313213.1 963611 R 366394 CDS YP_001313214.1 150376618 5318346 complement(964494..965435) 1 NC_009620.1 PFAM: protein of unknown function DUF403; KEGG: sme:SMb20887 hypothetical protein; hypothetical protein 965435 5318346 Smed_4481 Sinorhizobium medicae WSM419 hypothetical protein YP_001313214.1 964494 R 366394 CDS YP_001313215.1 150376619 5318347 complement(965440..966849) 1 NC_009620.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: sme:SMb20886 hypothetical protein; hypothetical protein 966849 5318347 Smed_4482 Sinorhizobium medicae WSM419 hypothetical protein YP_001313215.1 965440 R 366394 CDS YP_001313216.1 150376620 5318348 967330..968247 1 NC_009620.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMb20885 hypothetical protein; hypothetical protein 968247 5318348 Smed_4483 Sinorhizobium medicae WSM419 hypothetical protein YP_001313216.1 967330 D 366394 CDS YP_001313217.1 150376621 5318349 complement(968351..969847) 1 NC_009620.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMb20880 putative ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 969847 5318349 Smed_4484 Sinorhizobium medicae WSM419 DEAD/DEAH box helicase YP_001313217.1 968351 R 366394 CDS YP_001313218.1 150376622 5318350 970404..970922 1 NC_009620.1 KEGG: sme:SMb20879 hypothetical protein; hypothetical protein 970922 5318350 Smed_4485 Sinorhizobium medicae WSM419 hypothetical protein YP_001313218.1 970404 D 366394 CDS YP_001313219.1 150376623 5319178 complement(971016..971741) 1 NC_009620.1 PFAM: protein of unknown function DUF752; KEGG: sme:SMb20878 hypothetical protein; hypothetical protein 971741 5319178 Smed_4486 Sinorhizobium medicae WSM419 hypothetical protein YP_001313219.1 971016 R 366394 CDS YP_001313220.1 150376624 5319179 971781..972911 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb20877 putative oxidoreductase, possibly D-amino acid oxidase protein; FAD dependent oxidoreductase 972911 5319179 Smed_4487 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313220.1 971781 D 366394 CDS YP_001313221.1 150376625 5319180 973034..973849 1 NC_009620.1 PFAM: protein of unknown function DUF1045; KEGG: sme:SMb20876 hypothetical protein; hypothetical protein 973849 5319180 Smed_4488 Sinorhizobium medicae WSM419 hypothetical protein YP_001313221.1 973034 D 366394 CDS YP_001313222.1 150376626 5319181 973981..974910 1 NC_009620.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb20875 hypothetical protein; chitin deacetylase 974910 5319181 Smed_4489 Sinorhizobium medicae WSM419 chitin deacetylase YP_001313222.1 973981 D 366394 CDS YP_001313223.1 150376627 5319182 974910..975413 1 NC_009620.1 KEGG: sme:SMb20874 hypothetical protein; hypothetical protein 975413 5319182 Smed_4490 Sinorhizobium medicae WSM419 hypothetical protein YP_001313223.1 974910 D 366394 CDS YP_001313224.1 150376628 5319183 975501..976007 1 NC_009620.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 976007 5319183 Smed_4491 Sinorhizobium medicae WSM419 ureidoglycolate hydrolase YP_001313224.1 975501 D 366394 CDS YP_001313225.1 150376629 5319184 976237..976599 1 NC_009620.1 TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: sme:SMb20872 conserved hypothetical protein, transthyretin-like protein; hydroxyisourate hydrolase 976599 5319184 Smed_4492 Sinorhizobium medicae WSM419 hydroxyisourate hydrolase YP_001313225.1 976237 D 366394 CDS YP_001313226.1 150376630 5319185 complement(976642..977778) 1 NC_009620.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: sme:SMb20850 putative L-lactate dehydrogenase (cytochrome) protein; L-lactate dehydrogenase 977778 5319185 Smed_4493 Sinorhizobium medicae WSM419 L-lactate dehydrogenase YP_001313226.1 976642 R 366394 CDS YP_001313227.1 150376631 5319186 complement(977901..979208) 1 NC_009620.1 Catalyzes the deamination of guanine; guanine deaminase 979208 5319186 Smed_4494 Sinorhizobium medicae WSM419 guanine deaminase YP_001313227.1 977901 R 366394 CDS YP_001313228.1 150376632 5319187 complement(979205..980437) 1 NC_009620.1 PFAM: protein of unknown function DUF989; KEGG: sme:SMb20848 conserved hypothetical membrane protein, paralogue of Y21292; hypothetical protein 980437 5319187 Smed_4495 Sinorhizobium medicae WSM419 hypothetical protein YP_001313228.1 979205 R 366394 CDS YP_001313229.1 150376633 5319188 complement(980560..981489) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20847 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 981489 5319188 Smed_4496 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313229.1 980560 R 366394 CDS YP_001313230.1 150376634 5317937 981571..981774 1 NC_009620.1 KEGG: sme:SMb21676 hypothetical protein; hypothetical protein 981774 5317937 Smed_4497 Sinorhizobium medicae WSM419 hypothetical protein YP_001313230.1 981571 D 366394 CDS YP_001313231.1 150376635 5317938 complement(981782..984139) 1 NC_009620.1 TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb20846 probable xanthine dehydrogenase protein; xanthine dehydrogenase molybdopterin binding subunit 984139 5317938 Smed_4498 Sinorhizobium medicae WSM419 xanthine dehydrogenase molybdopterin binding subunit YP_001313231.1 981782 R 366394 CDS YP_001313232.1 150376636 5317939 complement(984136..985626) 1 NC_009620.1 TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb21011 probable xanthine dehydrogenase protein; xanthine dehydrogenase small subunit 985626 5317939 Smed_4499 Sinorhizobium medicae WSM419 xanthine dehydrogenase small subunit YP_001313232.1 984136 R 366394 CDS YP_001313233.1 150376637 5317940 complement(985653..986429) 1 NC_009620.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb21010 D-beta-hydroxybutyrate dehydrogenase protein; 3-hydroxybutyrate dehydrogenase 986429 5317940 Smed_4500 Sinorhizobium medicae WSM419 3-hydroxybutyrate dehydrogenase YP_001313233.1 985653 R 366394 CDS YP_001313234.1 150376638 5317941 986674..988167 1 NC_009620.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: sme:SMb21009 probable glycerol kinase, similar to sugar kinases protein; glycerol kinase 988167 5317941 Smed_4501 Sinorhizobium medicae WSM419 glycerol kinase YP_001313234.1 986674 D 366394 CDS YP_001313235.1 150376639 5317942 988339..988662 1 NC_009620.1 PFAM: regulatory protein ArsR; KEGG: sme:SMb21008 putative transcriptional regulator, ArsR family protein; regulatory protein ArsR 988662 5317942 Smed_4502 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001313235.1 988339 D 366394 CDS YP_001313236.1 150376640 5317943 988659..989090 1 NC_009620.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMb21007 hypothetical protein; activator of Hsp90 ATPase 1 family protein 989090 5317943 Smed_4503 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001313236.1 988659 D 366394 CDS YP_001313237.1 150376641 5317944 989154..989372 1 NC_009620.1 KEGG: mes:Meso_0629 hypothetical protein; hypothetical protein 989372 5317944 Smed_4504 Sinorhizobium medicae WSM419 hypothetical protein YP_001313237.1 989154 D 366394 CDS YP_001313238.1 150376642 5317945 989386..989844 1 NC_009620.1 PFAM: Domain of unknown function DUF1801; KEGG: sme:SMb21005 hypothetical protein; hypothetical protein 989844 5317945 Smed_4505 Sinorhizobium medicae WSM419 hypothetical protein YP_001313238.1 989386 D 366394 CDS YP_001313239.1 150376643 5317946 989890..990315 1 NC_009620.1 PFAM: Domain of unknown function DUF1801; KEGG: rle:RL2762 hypothetical protein; hypothetical protein 990315 5317946 Smed_4506 Sinorhizobium medicae WSM419 hypothetical protein YP_001313239.1 989890 D 366394 CDS YP_001313240.1 150376644 5317947 990423..991466 1 NC_009620.1 PFAM: luciferase family protein; KEGG: sme:SMb21003 putative oxidoreductase protein; luciferase family protein 991466 5317947 Smed_4507 Sinorhizobium medicae WSM419 luciferase family protein YP_001313240.1 990423 D 366394 CDS YP_001313241.1 150376645 5318071 991539..992288 1 NC_009620.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential; methionine aminopeptidase 992288 5318071 Smed_4508 Sinorhizobium medicae WSM419 methionine aminopeptidase YP_001313241.1 991539 D 366394 CDS YP_001313242.1 150376646 5318072 992444..993622 1 NC_009620.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: sme:SMb21000 putative transport protein; hypothetical protein 993622 5318072 Smed_4509 Sinorhizobium medicae WSM419 hypothetical protein YP_001313242.1 992444 D 366394 CDS YP_001313243.1 150376647 5318073 993776..995038 1 NC_009620.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; transporter 995038 5318073 Smed_4510 Sinorhizobium medicae WSM419 transporter YP_001313243.1 993776 D 366394 CDS YP_001313244.1 150376648 5318074 complement(995048..996046) 1 NC_009620.1 KEGG: sme:SMb20998 hypothetical protein; hypothetical protein 996046 5318074 Smed_4511 Sinorhizobium medicae WSM419 hypothetical protein YP_001313244.1 995048 R 366394 CDS YP_001313245.1 150376649 5318075 996217..996804 1 NC_009620.1 PFAM: NnrUfamily protein; KEGG: sme:SMb20997 putative membrane protein, similar to periplasmic nitrate reductase NnuR; NnrU family protein 996804 5318075 Smed_4512 Sinorhizobium medicae WSM419 NnrU family protein YP_001313245.1 996217 D 366394 CDS YP_001313246.1 150376650 5318076 996939..997607 1 NC_009620.1 KEGG: sme:SMb20996 hypothetical protein; hypothetical protein 997607 5318076 Smed_4513 Sinorhizobium medicae WSM419 hypothetical protein YP_001313246.1 996939 D 366394 CDS YP_001313247.1 150376651 5318077 997718..999151 1 NC_009620.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 999151 engA 5318077 engA Sinorhizobium medicae WSM419 GTP-binding protein EngA YP_001313247.1 997718 D 366394 CDS YP_001313248.1 150376652 5318078 999391..999930 1 NC_009620.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sme:SMb20994 hypothetical protein; BadM/Rrf2 family transcriptional regulator 999930 5318078 Smed_4515 Sinorhizobium medicae WSM419 BadM/Rrf2 family transcriptional regulator YP_001313248.1 999391 D 366394 CDS YP_001313249.1 150376653 5318079 complement(999986..1001173) 1 NC_009620.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMb20993 putative FMNH2-dependent monooxygenase protein; acyl-CoA dehydrogenase type 2 1001173 5318079 Smed_4516 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase type 2 YP_001313249.1 999986 R 366394 CDS YP_001313250.1 150376654 5318080 1001730..1003130 1 NC_009620.1 similar to Y20991; KEGG: sme:SMb20992 conserved hypothetical protein, similar to Y20991; hypothetical protein 1003130 5318080 Smed_4517 Sinorhizobium medicae WSM419 hypothetical protein YP_001313250.1 1001730 D 366394 CDS YP_001313251.1 150376655 5318493 1003250..1004707 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb20991 conserved hypothetical protein, similar to Y20992, slightly similar to monooxygenase; FAD dependent oxidoreductase 1004707 5318493 Smed_4518 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313251.1 1003250 D 366394 CDS YP_001313252.1 150376656 5318494 1004915..1006273 1 NC_009620.1 PFAM: protein of unknown function DUF107; KEGG: sme:SMb20990 probable membrane protein necessary for nodulation competitiveness; hypothetical protein 1006273 5318494 Smed_4519 Sinorhizobium medicae WSM419 hypothetical protein YP_001313252.1 1004915 D 366394 CDS YP_001313253.1 150376657 5318495 1006356..1007126 1 NC_009620.1 PFAM: band 7 protein; KEGG: sme:SMb20989 putative stomatin-like protein; hypothetical protein 1007126 5318495 Smed_4520 Sinorhizobium medicae WSM419 hypothetical protein YP_001313253.1 1006356 D 366394 CDS YP_001313254.1 150376658 5318496 1007251..1007721 1 NC_009620.1 PFAM: NUDIX hydrolase; KEGG: sme:SMb20988 hypothetical protein; NUDIX hydrolase 1007721 5318496 Smed_4521 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001313254.1 1007251 D 366394 CDS YP_001313255.1 150376659 5318497 complement(1007760..1008920) 1 NC_009620.1 TIGRFAM: siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMb20987 putative siroheme synthetase protein; siroheme synthase 1008920 5318497 Smed_4522 Sinorhizobium medicae WSM419 siroheme synthase YP_001313255.1 1007760 R 366394 CDS YP_001313256.1 150376660 5318498 complement(1008892..1011549) 1 NC_009620.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sme:SMb20986 putative nitrate reductase, large subunit protein; molybdopterin oxidoreductase 1011549 5318498 Smed_4523 Sinorhizobium medicae WSM419 molybdopterin oxidoreductase YP_001313256.1 1008892 R 366394 CDS YP_001313257.1 150376661 5318499 complement(1011552..1011890) 1 NC_009620.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMb20985 putative nitrite reductase [NAD(P)H], small subunit protein; nitrite reductase (NAD(P)H) small subunit 1011890 5318499 Smed_4524 Sinorhizobium medicae WSM419 nitrite reductase (NAD(P)H) small subunit YP_001313257.1 1011552 R 366394 CDS YP_001313258.1 150376662 5318500 complement(1011895..1014357) 1 NC_009620.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sme:SMb20984 putative nitrite reductase [NAD(P)H], large subunit protein; nitrite reductase (NAD(P)H) large subunit 1014357 5318500 Smed_4525 Sinorhizobium medicae WSM419 nitrite reductase (NAD(P)H) large subunit YP_001313258.1 1011895 R 366394 CDS YP_001313259.1 150376663 5318501 complement(1014420..1014737) 1 NC_009620.1 hypothetical protein 1014737 5318501 Smed_4526 Sinorhizobium medicae WSM419 hypothetical protein YP_001313259.1 1014420 R 366394 CDS YP_001313260.1 150376664 5318502 complement(1015026..1016333) 1 NC_009620.1 KEGG: sme:SMb21114 putative nitrate transport protein; putative nitrate transport protein 1016333 5318502 Smed_4527 Sinorhizobium medicae WSM419 putative nitrate transport protein YP_001313260.1 1015026 R 366394 CDS YP_001313261.1 150376665 5318503 complement(1016361..1016951) 1 NC_009620.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: rle:RL1994 putative two component assimilatory nitrate reductase regulator response regulatory protein; response regulator receiver/ANTAR domain-containing protein 1016951 5318503 Smed_4528 Sinorhizobium medicae WSM419 response regulator receiver/ANTAR domain-containing protein YP_001313261.1 1016361 R 366394 CDS YP_001313262.1 150376666 5317968 complement(1017088..1017792) 1 NC_009620.1 PFAM: TfuA domain protein core; KEGG: sme:SMb21116 putative protein, similar to gene related to biosynthesis of peptide antibiotic trifolitoxin; TfuA domain-containing protein 1017792 5317968 Smed_4529 Sinorhizobium medicae WSM419 TfuA domain-containing protein YP_001313262.1 1017088 R 366394 CDS YP_001313263.1 150376667 5317969 complement(1017885..1018343) 1 NC_009620.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMb21117 putative transcriptional regulator protein; XRE family transcriptional regulator 1018343 5317969 Smed_4530 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313263.1 1017885 R 366394 CDS YP_001313264.1 150376668 5317970 1018574..1019110 1 NC_009620.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: sme:SMb21119 putative gluconokinase protein; carbohydrate kinase 1019110 5317970 Smed_4531 Sinorhizobium medicae WSM419 carbohydrate kinase YP_001313264.1 1018574 D 366394 CDS YP_001313265.1 150376669 5317971 1019266..1020429 1 NC_009620.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMb21121 putative isovaleryl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 1020429 5317971 Smed_4532 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001313265.1 1019266 D 366394 CDS YP_001313266.1 150376670 5317972 1020493..1022100 1 NC_009620.1 PFAM: carboxyl transferase; KEGG: sme:SMb21122 putative methylcrotonoyl-CoA carboxylase non-biotinylated subunit protein; propionyl-CoA carboxylase 1022100 5317972 Smed_4533 Sinorhizobium medicae WSM419 propionyl-CoA carboxylase YP_001313266.1 1020493 D 366394 CDS YP_001313267.1 150376671 5317973 1022112..1022498 1 NC_009620.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMb21123 hypothetical membrane-anchored protein, similar to putative translation initiation inhibitor; endoribonuclease L-PSP 1022498 5317973 Smed_4534 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001313267.1 1022112 D 366394 CDS YP_001313268.1 150376672 5317974 1022515..1024503 1 NC_009620.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sme:SMb21124 putative methylcrotonoyl-CoA carboxylase biotinylated subunit protein; carbamoyl-phosphate synthase L chain ATP-binding 1024503 5317974 Smed_4535 Sinorhizobium medicae WSM419 carbamoyl-phosphate synthase L chain ATP-binding YP_001313268.1 1022515 D 366394 CDS YP_001313269.1 150376673 5317975 1024500..1025369 1 NC_009620.1 catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase 1025369 5317975 Smed_4536 Sinorhizobium medicae WSM419 hydroxymethylglutaryl-CoA lyase YP_001313269.1 1024500 D 366394 CDS YP_001313270.1 150376674 5317976 1025366..1026151 1 NC_009620.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1026151 5317976 Smed_4537 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001313270.1 1025366 D 366394 CDS YP_001313271.1 150376675 5317977 1026227..1026598 1 NC_009620.1 KEGG: sme:SMb21127 hypothetical protein; hypothetical protein 1026598 5317977 Smed_4538 Sinorhizobium medicae WSM419 hypothetical protein YP_001313271.1 1026227 D 366394 CDS YP_001313272.1 150376676 5317978 1026604..1027104 1 NC_009620.1 PFAM: RES domain protein; KEGG: sme:SMb21128 conserved hypothetical membrane-anchored protein; RES domain-containing protein 1027104 5317978 Smed_4539 Sinorhizobium medicae WSM419 RES domain-containing protein YP_001313272.1 1026604 D 366394 CDS YP_001313273.1 150376677 5319041 complement(1027229..1028599) 1 NC_009620.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMb21129 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 1028599 5319041 Smed_4540 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001313273.1 1027229 R 366394 CDS YP_001313274.1 150376678 5319042 complement(1028728..1029831) 1 NC_009620.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21130 putative sulfate uptake ABC transporter ATP-binding protein; sulfate ABC transporter ATPase 1029831 5319042 Smed_4541 Sinorhizobium medicae WSM419 sulfate ABC transporter ATPase YP_001313274.1 1028728 R 366394 CDS YP_001313275.1 150376679 5319043 complement(1029847..1030713) 1 NC_009620.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21131 putative sulfate uptake ABC transporter permease protein; sulfate ABC transporter permease 1030713 5319043 Smed_4542 Sinorhizobium medicae WSM419 sulfate ABC transporter permease YP_001313275.1 1029847 R 366394 CDS YP_001313276.1 150376680 5319044 complement(1030703..1031560) 1 NC_009620.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21132 putative sulfate uptake ABC transporter permease protein; sulfate ABC transporter permease 1031560 5319044 Smed_4543 Sinorhizobium medicae WSM419 sulfate ABC transporter permease YP_001313276.1 1030703 R 366394 CDS YP_001313277.1 150376681 5319045 complement(1031566..1032591) 1 NC_009620.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21133 putative sulfate uptake ABC transporter periplasmic solute-binding protein precursor, similar to Y11244; sulfate ABC transporter periplasmic sulfate-binding protein 1032591 5319045 Smed_4544 Sinorhizobium medicae WSM419 sulfate ABC transporter periplasmic sulfate-binding protein YP_001313277.1 1031566 R 366394 CDS YP_001313278.1 150376682 5319046 complement(1032855..1033913) 1 NC_009620.1 PFAM: alanine racemase domain protein; KEGG: sme:SMb21134 putative amino acid processing enzyme, similar to low specificity D-threonine aldolase protein; alanine racemase domain-containing protein 1033913 5319046 Smed_4545 Sinorhizobium medicae WSM419 alanine racemase domain-containing protein YP_001313278.1 1032855 R 366394 CDS YP_001313279.1 150376683 5319047 1034072..1034914 1 NC_009620.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb21135 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1034914 5319047 Smed_4546 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313279.1 1034072 D 366394 CDS YP_001313280.1 150376684 5319048 1034975..1035637 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21136 putative amino acid uptake ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 1035637 5319048 Smed_4547 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001313280.1 1034975 D 366394 CDS YP_001313281.1 150376685 5319049 1035643..1036302 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21137 putative amino acid uptake ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 1036302 5319049 Smed_4548 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001313281.1 1035643 D 366394 CDS YP_001313282.1 150376686 5319050 1036316..1037083 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21138 putative amino acid uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1037083 5319050 Smed_4549 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313282.1 1036316 D 366394 CDS YP_001313283.1 150376687 5319051 1037118..1037501 1 NC_009620.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMb21139 putative protein, similar to translation initiation inhibitors; endoribonuclease L-PSP 1037501 5319051 Smed_4550 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001313283.1 1037118 D 366394 CDS YP_001313284.1 150376688 5318413 1037516..1038349 1 NC_009620.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb21140 putative transcriptional regulator protein; regulatory protein IclR 1038349 5318413 Smed_4551 Sinorhizobium medicae WSM419 regulatory protein IclR YP_001313284.1 1037516 D 366394 CDS YP_001313285.1 150376689 5318414 complement(1038362..1039444) 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21216 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1039444 5318414 Smed_4552 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313285.1 1038362 R 366394 CDS YP_001313286.1 150376690 5318415 complement(1039441..1040376) 1 NC_009620.1 PFAM: PfkB domain protein; KEGG: sme:SMb21217 putative sugar kinase protein; ribokinase-like domain-containing protein 1040376 5318415 Smed_4553 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001313286.1 1039441 R 366394 CDS YP_001313287.1 150376691 5318416 complement(1040379..1041398) 1 NC_009620.1 PFAM: sugar isomerase (SIS); KEGG: sme:SMb21218 putative sugar-processing enzyme, possibly aminotransferase protein; sugar isomerase (SIS) 1041398 5318416 Smed_4554 Sinorhizobium medicae WSM419 sugar isomerase (SIS) YP_001313287.1 1040379 R 366394 CDS YP_001313288.1 150376692 5318417 complement(1041401..1042246) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21219 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1042246 5318417 Smed_4555 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313288.1 1041401 R 366394 CDS YP_001313289.1 150376693 5318418 complement(1042246..1043127) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21220 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1043127 5318418 Smed_4556 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313289.1 1042246 R 366394 CDS YP_001313290.1 150376694 5318419 complement(1043256..1044494) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21221 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1044494 5318419 Smed_4557 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313290.1 1043256 R 366394 CDS YP_001313291.1 150376695 5318420 1044718..1045947 1 NC_009620.1 PFAM: ROK family protein; KEGG: sme:SMb21222 putative transcriptional regulator protein; ROK family protein 1045947 5318420 Smed_4558 Sinorhizobium medicae WSM419 ROK family protein YP_001313291.1 1044718 D 366394 CDS YP_001313292.1 150376696 5318421 1046157..1047056 1 NC_009620.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1047056 5318421 Smed_4559 Sinorhizobium medicae WSM419 sulfate adenylyltransferase subunit 2 YP_001313292.1 1046157 D 366394 CDS YP_001313293.1 150376697 5318422 1047056..1048957 1 NC_009620.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 1048957 5318422 Smed_4560 Sinorhizobium medicae WSM419 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase YP_001313293.1 1047056 D 366394 CDS YP_001313294.1 150376698 5319229 1048954..1049793 1 NC_009620.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sme:SMb21225 putative inositol monophosphatase, possibly involved in PAPS metabolism protein; 3'(2'),5'-bisphosphate nucleotidase 1049793 5319229 Smed_4561 Sinorhizobium medicae WSM419 3'(2'),5'-bisphosphate nucleotidase YP_001313294.1 1048954 D 366394 CDS YP_001313295.1 150376699 5319230 1049841..1050581 1 NC_009620.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sme:SMb21226 putative histidinol phosphatase; phosphotransferase domain-containing protein 1050581 5319230 Smed_4562 Sinorhizobium medicae WSM419 phosphotransferase domain-containing protein YP_001313295.1 1049841 D 366394 CDS YP_001313296.1 150376700 5319231 1050578..1051570 1 NC_009620.1 undetermined role; similar to CarB protein but much smaller; carbamoyl phosphate synthase-like protein 1051570 5319231 Smed_4563 Sinorhizobium medicae WSM419 carbamoyl phosphate synthase-like protein YP_001313296.1 1050578 D 366394 CDS YP_001313297.1 150376701 5319232 1051576..1052502 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb21228 putative nucleotide sugar epimerase dehydratase protein; NAD-dependent epimerase/dehydratase 1052502 5319232 Smed_4564 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001313297.1 1051576 D 366394 CDS YP_001313298.1 150376702 5319233 complement(1052572..1053735) 1 NC_009620.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMb21229 putative calcium-binding exported protein; Hemolysin-type calcium-binding protein 1053735 5319233 Smed_4565 Sinorhizobium medicae WSM419 Hemolysin-type calcium-binding protein YP_001313298.1 1052572 R 366394 CDS YP_001313299.1 150376703 5319234 complement(1053994..1055109) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21230 putative glycosyltransferase protein; group 1 glycosyl transferase 1055109 5319234 Smed_4566 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313299.1 1053994 R 366394 CDS YP_001313300.1 150376704 5319235 complement(1055119..1056345) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21231 putative glycosyltransferase protein; group 1 glycosyl transferase 1056345 5319235 Smed_4567 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313300.1 1055119 R 366394 CDS YP_001313301.1 150376705 5319236 complement(1056505..1058700) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: sme:SMb21232 putative nucleotide sugar epimerase dehydratase protein; polysaccharide biosynthesis protein CapD 1058700 5319236 Smed_4568 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein CapD YP_001313301.1 1056505 R 366394 CDS YP_001313302.1 150376706 5319237 complement(1059069..1059983) 1 NC_009620.1 PFAM: formyl transferase domain protein; KEGG: sme:SMb21235 putative formyltransferase, similar to methionyl-tRNA(fMet) N-formyltransferase protein; formyl transferase domain-containing protein 1059983 5319237 Smed_4569 Sinorhizobium medicae WSM419 formyl transferase domain-containing protein YP_001313302.1 1059069 R 366394 CDS YP_001313303.1 150376707 5319238 1060445..1061317 1 NC_009620.1 KEGG: sme:SMb21236 putative ATPGTP-binding protein; putative ATPGTP-binding protein 1061317 5319238 Smed_4570 Sinorhizobium medicae WSM419 putative ATPGTP-binding protein YP_001313303.1 1060445 D 366394 CDS YP_001313304.1 150376708 5319239 1061415..1062353 1 NC_009620.1 C-terminal domain similar to sulfotransferase protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein; hypothetical protein 1062353 5319239 Smed_4571 Sinorhizobium medicae WSM419 hypothetical protein YP_001313304.1 1061415 D 366394 CDS YP_001313305.1 150376709 5318019 1062364..1063977 1 NC_009620.1 KEGG: sme:SMb21239 putative pectate lysase, possibly truncated due to chromosomal point mutation or sequencing artefact protein; hypothetical protein 1063977 5318019 Smed_4572 Sinorhizobium medicae WSM419 hypothetical protein YP_001313305.1 1062364 D 366394 CDS YP_001313306.1 150376710 5318020 complement(1063988..1065976) 1 NC_009620.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMb21240 putative MPA1 family protein; lipopolysaccharide biosynthesis protein 1065976 5318020 Smed_4573 Sinorhizobium medicae WSM419 lipopolysaccharide biosynthesis protein YP_001313306.1 1063988 R 366394 CDS YP_001313307.1 150376711 5318021 complement(1066340..1067623) 1 NC_009620.1 KEGG: sme:SMb21241 hypothetical protein; hypothetical protein 1067623 5318021 Smed_4574 Sinorhizobium medicae WSM419 hypothetical protein YP_001313307.1 1066340 R 366394 CDS YP_001313308.1 150376712 5318022 complement(1067657..1068898) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21242 putative glycosyltransferase protein; group 1 glycosyl transferase 1068898 5318022 Smed_4575 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313308.1 1067657 R 366394 CDS YP_001313309.1 150376713 5318023 complement(1068953..1069792) 1 NC_009620.1 PFAM: sulfotransferase; KEGG: sme:SMb21243 putative sulfotransferase protein; sulfotransferase 1069792 5318023 Smed_4576 Sinorhizobium medicae WSM419 sulfotransferase YP_001313309.1 1068953 R 366394 CDS YP_001313310.1 150376714 5318024 complement(1070114..1071472) 1 NC_009620.1 PFAM: polysaccharide biosynthesis protein; KEGG: sme:SMb21244 putative membrane protein, similar to putative polysaccharide transporter; polysaccharide biosynthesis protein 1071472 5318024 Smed_4577 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001313310.1 1070114 R 366394 CDS YP_001313311.1 150376715 5318025 1071872..1073125 1 NC_009620.1 PFAM: polysaccharide export protein; KEGG: sme:SMb21245 putative OMA family outer membrane protein precursor, similar to ExoF; polysaccharide export protein 1073125 5318025 Smed_4578 Sinorhizobium medicae WSM419 polysaccharide export protein YP_001313311.1 1071872 D 366394 CDS YP_001313312.1 150376716 5318026 1073189..1073869 1 NC_009620.1 PFAM: sugar transferase; KEGG: sme:SMb21246 putative glycosyltransferase, possibly periplasmic protein; sugar transferase 1073869 5318026 Smed_4579 Sinorhizobium medicae WSM419 sugar transferase YP_001313312.1 1073189 D 366394 CDS YP_001313313.1 150376717 5318027 1073923..1074609 1 NC_009620.1 PFAM: LmbE family protein; KEGG: sme:SMb21247 conserved hypothetical protein, possibly membrane-associated; LmbE family protein 1074609 5318027 Smed_4580 Sinorhizobium medicae WSM419 LmbE family protein YP_001313313.1 1073923 D 366394 CDS YP_001313314.1 150376718 5318028 1074677..1075861 1 NC_009620.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sme:SMb21248 putative aminotransferase protein; DegT/DnrJ/EryC1/StrS aminotransferase 1075861 5318028 Smed_4581 Sinorhizobium medicae WSM419 DegT/DnrJ/EryC1/StrS aminotransferase YP_001313314.1 1074677 D 366394 CDS YP_001313315.1 150376719 5318029 complement(1076108..1076950) 1 NC_009620.1 PFAM: sulfotransferase; KEGG: sme:SMb21249 putative sulfotransferase protein; sulfotransferase 1076950 5318029 Smed_4582 Sinorhizobium medicae WSM419 sulfotransferase YP_001313315.1 1076108 R 366394 CDS YP_001313316.1 150376720 5318999 1077445..1078635 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21250 putative glycosyltransferase protein; group 1 glycosyl transferase 1078635 5318999 Smed_4583 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313316.1 1077445 D 366394 CDS YP_001313317.1 150376721 5319000 1078743..1080836 1 NC_009620.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMb21251 conserved hypothetical membrane protein, similar to Y1058; mechanosensitive ion channel MscS 1080836 5319000 Smed_4584 Sinorhizobium medicae WSM419 mechanosensitive ion channel MscS YP_001313317.1 1078743 D 366394 CDS YP_001313318.1 150376722 5319001 1080932..1082029 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21252 putative glycosyltransferase protein; group 1 glycosyl transferase 1082029 5319001 Smed_4585 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313318.1 1080932 D 366394 CDS YP_001313319.1 150376723 5319002 1082026..1082796 1 NC_009620.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21253 hypothetical protein; polysaccharide deacetylase 1082796 5319002 Smed_4586 Sinorhizobium medicae WSM419 polysaccharide deacetylase YP_001313319.1 1082026 D 366394 CDS YP_001313320.1 150376724 5319003 complement(1082783..1083613) 1 NC_009620.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMb21254 hypothetical protein; beta-lactamase domain-containing protein 1083613 5319003 Smed_4587 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001313320.1 1082783 R 366394 CDS YP_001313321.1 150376725 5319004 1083849..1085048 1 NC_009620.1 KEGG: sme:SMb21255 hypothetical protein; hypothetical protein 1085048 5319004 Smed_4588 Sinorhizobium medicae WSM419 hypothetical protein YP_001313321.1 1083849 D 366394 CDS YP_001313322.1 150376726 5319005 complement(1085038..1086435) 1 NC_009620.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sme:SMb21256 putative nucleotide sugar oxidase protein; UDP-glucose 6-dehydrogenase 1086435 5319005 Smed_4589 Sinorhizobium medicae WSM419 UDP-glucose 6-dehydrogenase YP_001313322.1 1085038 R 366394 CDS YP_001313323.1 150376727 5319006 1086691..1088175 1 NC_009620.1 KEGG: rle:pRL110055 putative adenylate cyclase; putative adenylate/guanylate cyclase 1088175 5319006 Smed_4590 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001313323.1 1086691 D 366394 CDS YP_001313324.1 150376728 5319007 1088184..1089152 1 NC_009620.1 KEGG: sme:SMb21259 hypothetical exported protein precursor; hypothetical protein 1089152 5319007 Smed_4591 Sinorhizobium medicae WSM419 hypothetical protein YP_001313324.1 1088184 D 366394 CDS YP_001313325.1 150376729 5319008 1089560..1091449 1 NC_009620.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb21260 putative mureinpeptideoligopeptide ABC transporter ATP-binding protein; ABC transporter-like protein 1091449 5319008 Smed_4592 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313325.1 1089560 D 366394 CDS YP_001313326.1 150376730 5319009 1091446..1093347 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb21261 putative mureinpeptideoligopeptide ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1093347 5319009 Smed_4593 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313326.1 1091446 D 366394 CDS YP_001313327.1 150376731 5318504 1093349..1094347 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21262 putative mureinpeptideoligopeptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1094347 5318504 Smed_4594 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313327.1 1093349 D 366394 CDS YP_001313328.1 150376732 5318505 1094344..1095519 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21263 putative mureinpeptideoligopeptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1095519 5318505 Smed_4595 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313328.1 1094344 D 366394 CDS YP_001313329.1 150376733 5318506 1095598..1096812 1 NC_009620.1 KEGG: sme:SMb21264 putative membrane-anchored protein, slightly similar to UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; putative membrane-anchored protein 1096812 5318506 Smed_4596 Sinorhizobium medicae WSM419 putative membrane-anchored protein YP_001313329.1 1095598 D 366394 CDS YP_001313330.1 150376734 5318507 1096819..1098066 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21265 putative glycosyltransferase protein; group 1 glycosyl transferase 1098066 5318507 Smed_4597 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313330.1 1096819 D 366394 CDS YP_001313331.1 150376735 5318508 1098063..1099217 1 NC_009620.1 PFAM: Glycosyltransferase 28 domain; KEGG: sme:SMb21266 putative protein, slightly similar to UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; glycosyltransferase family 28 protein 1099217 5318508 Smed_4598 Sinorhizobium medicae WSM419 glycosyltransferase family 28 protein YP_001313331.1 1098063 D 366394 CDS YP_001313332.1 150376736 5318509 complement(1099281..1099955) 1 NC_009620.1 KEGG: mlo:mll3253 hypothetical protein; hypothetical protein 1099955 5318509 Smed_4599 Sinorhizobium medicae WSM419 hypothetical protein YP_001313332.1 1099281 R 366394 CDS YP_001313333.1 150376737 5318510 1100303..1103014 1 NC_009620.1 PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: sme:SMb21269 putative ATP-binding component of an ABC transporter with an unusual central domain protein; ABC transporter-like protein 1103014 5318510 Smed_4600 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313333.1 1100303 D 366394 CDS YP_001313334.1 150376738 5318511 1103111..1103575 1 NC_009620.1 PFAM: cyclic nucleotide-binding; KEGG: sme:SMb21270 putative transcriptional regulator protein; cyclic nucleotide-binding protein 1103575 5318511 Smed_4601 Sinorhizobium medicae WSM419 cyclic nucleotide-binding protein YP_001313334.1 1103111 D 366394 CDS YP_001313335.1 150376739 5318512 1103744..1104493 1 NC_009620.1 TIGRFAM: methyltransferase FkbM family; KEGG: sme:SMb21271 hypothetical nucleotide-binding protein; FkbM family methyltransferase 1104493 5318512 Smed_4602 Sinorhizobium medicae WSM419 FkbM family methyltransferase YP_001313335.1 1103744 D 366394 CDS YP_001313336.1 150376740 5318514 1105052..1106107 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb21272 putative LacI family transcritional regulator protein; periplasmic binding protein/LacI transcriptional regulator 1106107 5318514 Smed_4604 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313336.1 1105052 D 366394 CDS YP_001313337.1 150376741 5318372 1106104..1107126 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21273 putative spermidineputrescine ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1107126 5318372 Smed_4605 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313337.1 1106104 D 366394 CDS YP_001313338.1 150376742 5318373 1107162..1108043 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21274 putative spermidineputrescine ABC transporter permeasee protein; binding-protein-dependent transport systems inner membrane component 1108043 5318373 Smed_4606 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313338.1 1107162 D 366394 CDS YP_001313339.1 150376743 5318374 1108040..1108819 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21275 putative spermidineputrescine ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1108819 5318374 Smed_4607 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313339.1 1108040 D 366394 CDS YP_001313340.1 150376744 5318375 1108812..1109840 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21276 putative spermidineputrescine ABC transporter ATP-binding protein; ABC transporter-like protein 1109840 5318375 Smed_4608 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313340.1 1108812 D 366394 CDS YP_001313341.1 150376745 5318376 1109847..1110770 1 NC_009620.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sme:SMb21277 putative inosine-uridine preferring nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase 1110770 5318376 Smed_4609 Sinorhizobium medicae WSM419 inosine/uridine-preferring nucleoside hydrolase YP_001313341.1 1109847 D 366394 CDS YP_001313342.1 150376746 5318377 1110767..1112548 1 NC_009620.1 PFAM: amidohydrolase; KEGG: sme:SMb21278 probable adenine deaminase protein; adenine deaminase 1112548 5318377 Smed_4610 Sinorhizobium medicae WSM419 adenine deaminase YP_001313342.1 1110767 D 366394 CDS YP_001313343.1 150376747 5318378 1112598..1113002 1 NC_009620.1 hypothetical protein 1113002 5318378 Smed_4611 Sinorhizobium medicae WSM419 hypothetical protein YP_001313343.1 1112598 D 366394 CDS YP_001313344.1 150376748 5318379 complement(1113102..1114271) 1 NC_009620.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sme:SMb21279 putative amidohydrolase, similar to hippurate hydrolase protein; amidohydrolase 1114271 5318379 Smed_4612 Sinorhizobium medicae WSM419 amidohydrolase YP_001313344.1 1113102 R 366394 CDS YP_001313345.1 150376749 5318380 1114422..1115123 1 NC_009620.1 Involved in nucleotide synthesis and salvage; phosphoribosyltransferase 1115123 5318380 Smed_4613 Sinorhizobium medicae WSM419 phosphoribosyltransferase YP_001313345.1 1114422 D 366394 CDS YP_001313346.1 150376750 5318381 complement(1115185..1115652) 1 NC_009620.1 PFAM: protein of unknown function DUF411; KEGG: ret:RHE_PE00238 hypothetical protein; hypothetical protein 1115652 5318381 Smed_4614 Sinorhizobium medicae WSM419 hypothetical protein YP_001313346.1 1115185 R 366394 CDS YP_001313347.1 150376751 5318926 1116012..1117304 1 NC_009620.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sme:SMb21281 putative integral membrane transporter protein, xanthineuracil permeases family; xanthine/uracil/vitamin C permease 1117304 5318926 Smed_4615 Sinorhizobium medicae WSM419 xanthine/uracil/vitamin C permease YP_001313347.1 1116012 D 366394 CDS YP_001313348.1 150376752 5318928 1117939..1118457 1 NC_009620.1 KEGG: rru:Rru_A1249 kinase-like; kinase-like protein 1118457 5318928 Smed_4617 Sinorhizobium medicae WSM419 kinase-like protein YP_001313348.1 1117939 D 366394 CDS YP_001313349.1 150376753 5318929 complement(1118904..1120319) 1 NC_009620.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21284 putative enzyme, similar to uricase protein; chitin deacetylase 1120319 5318929 Smed_4618 Sinorhizobium medicae WSM419 chitin deacetylase YP_001313349.1 1118904 R 366394 CDS YP_001313350.1 150376754 5318930 1120487..1120858 1 NC_009620.1 TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: sme:SMb21285 conserved hypothetical protein, transthyretin-like protein; hydroxyisourate hydrolase 1120858 5318930 Smed_4619 Sinorhizobium medicae WSM419 hydroxyisourate hydrolase YP_001313350.1 1120487 D 366394 CDS YP_001313351.1 150376755 5318931 1120864..1122345 1 NC_009620.1 TIGRFAM: Xanthine dehydrogenase small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb21286 probable xanthine dehydrogenase protein; xanthine dehydrogenase small subunit 1122345 5318931 Smed_4620 Sinorhizobium medicae WSM419 xanthine dehydrogenase small subunit YP_001313351.1 1120864 D 366394 CDS YP_001313352.1 150376756 5318932 1122359..1124692 1 NC_009620.1 TIGRFAM: Xanthine dehydrogenase molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMb21287 putative xanthine dehydrogenase protein; xanthine dehydrogenase molybdopterin binding subunit 1124692 5318932 Smed_4621 Sinorhizobium medicae WSM419 xanthine dehydrogenase molybdopterin binding subunit YP_001313352.1 1122359 D 366394 CDS YP_001313353.1 150376757 5318933 1124728..1125585 1 NC_009620.1 TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: sme:SMb21288 probable xanthine dehydrogenase protein; xanthine dehydrogenase accessory protein XdhC 1125585 5318933 Smed_4622 Sinorhizobium medicae WSM419 xanthine dehydrogenase accessory protein XdhC YP_001313353.1 1124728 D 366394 CDS YP_001313354.1 150376758 5318934 complement(1125670..1126617) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb21291 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 1126617 5318934 Smed_4623 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313354.1 1125670 R 366394 CDS YP_001313355.1 150376759 5318935 1126767..1128005 1 NC_009620.1 PFAM: protein of unknown function DUF989; KEGG: sme:SMb21292 conserved hypothetical membrane protein, paralogue of Y20848; hypothetical protein 1128005 5318935 Smed_4624 Sinorhizobium medicae WSM419 hypothetical protein YP_001313355.1 1126767 D 366394 CDS YP_001313356.1 150376760 5318936 1128002..1129345 1 NC_009620.1 Catalyzes the deamination of guanine; guanine deaminase 1129345 5318936 Smed_4625 Sinorhizobium medicae WSM419 guanine deaminase YP_001313356.1 1128002 D 366394 CDS YP_001313357.1 150376761 5319261 complement(1129627..1130106) 1 NC_009620.1 PFAM: heat shock protein Hsp20; KEGG: sme:SMb21295 putative small heat shock protein, HSP20 family; heat shock protein Hsp20 1130106 5319261 Smed_4626 Sinorhizobium medicae WSM419 heat shock protein Hsp20 YP_001313357.1 1129627 R 366394 CDS YP_001313358.1 150376762 5319262 1130430..1130735 1 NC_009620.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21296 hypothetical protein; hypothetical protein 1130735 5319262 Smed_4627 Sinorhizobium medicae WSM419 hypothetical protein YP_001313358.1 1130430 D 366394 CDS YP_001313359.1 150376763 5319263 complement(1130756..1132810) 1 NC_009620.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: sme:SMb21297 probable bifunctional penicillin-binding protein; penicillin-binding protein 1C 1132810 5319263 Smed_4628 Sinorhizobium medicae WSM419 penicillin-binding protein 1C YP_001313359.1 1130756 R 366394 CDS YP_001313360.1 150376764 5319265 1138567..1139322 1 NC_009620.1 PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: sme:SMb21299 putative transcriptional regulator, DeoR family protein; DeoR family transcriptional regulator 1139322 5319265 Smed_4630 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001313360.1 1138567 D 366394 CDS YP_001313361.1 150376765 5319266 1139418..1140422 1 NC_009620.1 TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sme:SMb21300 putative deoxyribose-phosphate aldolase protein; deoxyribose-phosphate aldolase 1140422 5319266 Smed_4631 Sinorhizobium medicae WSM419 deoxyribose-phosphate aldolase YP_001313361.1 1139418 D 366394 CDS YP_001313362.1 150376766 5319267 1140427..1142811 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb21301 putatively membrane-anchored aldehyde dehydrogenase protein; aldehyde dehydrogenase 1142811 5319267 Smed_4632 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001313362.1 1140427 D 366394 CDS YP_001313363.1 150376767 5319268 1143097..1143552 1 NC_009620.1 PFAM: RbsD or FucU transport; KEGG: sme:SMb21302 similar to protein from fucose degradation operon; transporter 1143552 5319268 Smed_4633 Sinorhizobium medicae WSM419 transporter YP_001313363.1 1143097 D 366394 CDS YP_001313364.1 150376768 5319269 1143567..1143998 1 NC_009620.1 PFAM: OsmC family protein; KEGG: sme:SMb21303 hypothetical membrane-anchored protein; OsmC family protein 1143998 5319269 Smed_4634 Sinorhizobium medicae WSM419 OsmC family protein YP_001313364.1 1143567 D 366394 CDS YP_001313365.1 150376769 5319270 1144028..1144822 1 NC_009620.1 PFAM: amidinotransferase; KEGG: sme:SMb21304 putative NG,NG-dimethylarginine dimethylaminohydrolase (dimethylargininase) protein; amidinotransferase 1144822 5319270 Smed_4635 Sinorhizobium medicae WSM419 amidinotransferase YP_001313365.1 1144028 D 366394 CDS YP_001313366.1 150376770 5319271 complement(1144923..1146299) 1 NC_009620.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 1146299 5319271 Smed_4636 Sinorhizobium medicae WSM419 mercuric reductase YP_001313366.1 1144923 R 366394 CDS YP_001313367.1 150376771 5319282 1146538..1147455 1 NC_009620.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMb21144 putative choline uptake ABC transporter periplasmic solute-binding protein precursor; glycine betaine ABC transporter substrate-binding protein 1147455 5319282 Smed_4637 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001313367.1 1146538 D 366394 CDS YP_001313368.1 150376772 5319283 1147533..1148732 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21145 putative choline uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1148732 5319283 Smed_4638 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313368.1 1147533 D 366394 CDS YP_001313369.1 150376773 5319284 1148729..1149667 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21146 putative choline uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1149667 5319284 Smed_4639 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313369.1 1148729 D 366394 CDS YP_001313370.1 150376774 5319285 1149664..1150404 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21147 putative choline uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1150404 5319285 Smed_4640 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313370.1 1149664 D 366394 CDS YP_001313371.1 150376775 5319286 1150540..1151700 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb21148 putative oxidoreductase protein; oxidoreductase domain-containing protein 1151700 5319286 Smed_4641 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313371.1 1150540 D 366394 CDS YP_001313372.1 150376776 5319287 1151713..1152597 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21149 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1152597 5319287 Smed_4642 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313372.1 1151713 D 366394 CDS YP_001313373.1 150376777 5319288 1152594..1153451 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21150 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1153451 5319288 Smed_4643 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313373.1 1152594 D 366394 CDS YP_001313374.1 150376778 5319289 1153481..1154710 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21151 putative periplasmic solute-binding protein of a sugar uptake ABC transporter system; extracellular solute-binding protein 1154710 5319289 Smed_4644 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313374.1 1153481 D 366394 CDS YP_001313375.1 150376779 5319290 1154796..1155929 1 NC_009620.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21152 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1155929 5319290 Smed_4645 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313375.1 1154796 D 366394 CDS YP_001313376.1 150376780 5319291 1155932..1156432 1 NC_009620.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMb21153 putative acetyltransferase protein; N-acetyltransferase GCN5 1156432 5319291 Smed_4646 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001313376.1 1155932 D 366394 CDS YP_001313377.1 150376781 5319292 1156592..1156975 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21154 hypothetical protein, bleomycin resistance protein family; glyoxalase/bleomycin resistance protein/dioxygenase 1156975 5319292 Smed_4647 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001313377.1 1156592 D 366394 CDS YP_001313378.1 150376782 5318811 complement(1157006..1158499) 1 NC_009620.1 PFAM: uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: sme:SMb21155 hypothetical protein; hypothetical protein 1158499 5318811 Smed_4648 Sinorhizobium medicae WSM419 hypothetical protein YP_001313378.1 1157006 R 366394 CDS YP_001313379.1 150376783 5318812 complement(1158506..1158991) 1 NC_009620.1 KEGG: sme:SMb21156 hypothetical protein; hypothetical protein 1158991 5318812 Smed_4649 Sinorhizobium medicae WSM419 hypothetical protein YP_001313379.1 1158506 R 366394 CDS YP_001313380.1 150376784 5318813 1159107..1159496 1 NC_009620.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMb21157 putative translation initiation inhibitor protein; endoribonuclease L-PSP 1159496 5318813 Smed_4650 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001313380.1 1159107 D 366394 CDS YP_001313381.1 150376785 5318814 1159517..1160380 1 NC_009620.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMb21158 putative transcriptional regulator, probably of sugar phosphate metabolism protein; RpiR family transcriptional regulator 1160380 5318814 Smed_4651 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001313381.1 1159517 D 366394 CDS YP_001313382.1 150376786 5318815 1160382..1161176 1 NC_009620.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb21159 short chain dehydrogenase; short chain dehydrogenase 1161176 5318815 Smed_4652 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001313382.1 1160382 D 366394 CDS YP_001313383.1 150376787 5318816 1161201..1163120 1 NC_009620.1 PFAM: glycoside hydrolase family 20; KEGG: sme:SMb21160 putative glycosyl hydrolase, similar to beta-N-acetylhexosaminidases protein; beta-N-acetylhexosaminidase 1163120 5318816 Smed_4653 Sinorhizobium medicae WSM419 beta-N-acetylhexosaminidase YP_001313383.1 1161201 D 366394 CDS YP_001313384.1 150376788 5318817 1163132..1164565 1 NC_009620.1 PFAM: uncharacterised conserved protein UCP012702; MlrC domain protein; KEGG: sme:SMb21161 hypothetical protein; MlrC domain-containing protein 1164565 5318817 Smed_4654 Sinorhizobium medicae WSM419 MlrC domain-containing protein YP_001313384.1 1163132 D 366394 CDS YP_001313385.1 150376789 5318818 1164633..1165844 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb21162 putative integral membrane transporter protein; major facilitator transporter 1165844 5318818 Smed_4655 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313385.1 1164633 D 366394 CDS YP_001313386.1 150376790 5318819 complement(1165915..1167594) 1 NC_009620.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 1167594 5318819 Smed_4656 Sinorhizobium medicae WSM419 urocanate hydratase YP_001313386.1 1165915 R 366394 CDS YP_001313387.1 150376791 5318820 complement(1167591..1168406) 1 NC_009620.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sme:SMb21164 putative formiminoglutamase protein; N-formylglutamate amidohydrolase 1168406 5318820 Smed_4657 Sinorhizobium medicae WSM419 N-formylglutamate amidohydrolase YP_001313387.1 1167591 R 366394 CDS YP_001313388.1 150376792 5318821 complement(1168408..1169943) 1 NC_009620.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 1169943 5318821 Smed_4658 Sinorhizobium medicae WSM419 histidine ammonia-lyase YP_001313388.1 1168408 R 366394 CDS YP_001313389.1 150376793 5319334 complement(1169940..1171187) 1 NC_009620.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 1171187 5319334 Smed_4659 Sinorhizobium medicae WSM419 imidazolonepropionase YP_001313389.1 1169940 R 366394 CDS YP_001313390.1 150376794 5319335 complement(1171408..1172592) 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb21168 putative integral membrane transporter protein; major facilitator transporter 1172592 5319335 Smed_4660 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313390.1 1171408 R 366394 CDS YP_001313391.1 150376795 5319336 1172681..1173052 1 NC_009620.1 PFAM: regulatory protein ArsR; KEGG: sme:SMb21169 putative transcriptional regulator, ArsR family protein; regulatory protein ArsR 1173052 5319336 Smed_4661 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001313391.1 1172681 D 366394 CDS YP_001313392.1 150376796 5319337 complement(1173098..1173685) 1 NC_009620.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: sme:SMb21170 putative guanylate kinase, also similar to E. coli PhnN protein; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 1173685 5319337 Smed_4662 Sinorhizobium medicae WSM419 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN YP_001313392.1 1173098 R 366394 CDS YP_001313393.1 150376797 5319338 complement(1173682..1174821) 1 NC_009620.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMb21171 putative enzyme protein; phosphonate metabolism protein PhnM 1174821 5319338 Smed_4663 Sinorhizobium medicae WSM419 phosphonate metabolism protein PhnM YP_001313393.1 1173682 R 366394 CDS YP_001313394.1 150376798 5319339 complement(1174823..1175530) 1 NC_009620.1 PFAM: protein of unknown function DUF1045; KEGG: rle:RL0165 hypothetical protein; hypothetical protein 1175530 5319339 Smed_4664 Sinorhizobium medicae WSM419 hypothetical protein YP_001313394.1 1174823 R 366394 CDS YP_001313395.1 150376799 5319340 complement(1175869..1177380) 1 NC_009620.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21174 phosphate uptake ABC transporter permease protein; phosphonate ABC transporter inner membrane subunit 1177380 5319340 Smed_4665 Sinorhizobium medicae WSM419 phosphonate ABC transporter inner membrane subunit YP_001313395.1 1175869 R 366394 CDS YP_001313396.1 150376800 5319341 complement(1177390..1178352) 1 NC_009620.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21175 phosphate uptake ABC transporter permease protein; phosphonate ABC transporter inner membrane subunit 1178352 5319341 Smed_4666 Sinorhizobium medicae WSM419 phosphonate ABC transporter inner membrane subunit YP_001313396.1 1177390 R 366394 CDS YP_001313397.1 150376801 5319342 complement(1178508..1179413) 1 NC_009620.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: sme:SMb21176 phosphate uptake ABC transporter periplasmic solute-binding protein precursor; phosphonate ABC transporter periplasmic phosphonate-binding protein 1179413 5319342 Smed_4667 Sinorhizobium medicae WSM419 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001313397.1 1178508 R 366394 CDS YP_001313398.1 150376802 5319343 complement(1179501..1180403) 1 NC_009620.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21177 phosphate uptake ABC transporter ATP-binding protein; phosphonate ABC transporter ATPase 1180403 5319343 Smed_4668 Sinorhizobium medicae WSM419 phosphonate ABC transporter ATPase YP_001313398.1 1179501 R 366394 CDS YP_001313399.1 150376803 5319344 complement(1180511..1181635) 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb21179 putative FAD-dependent glycerol-3-phosphate dehydrogenase protein; FAD dependent oxidoreductase 1181635 5319344 Smed_4669 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313399.1 1180511 R 366394 CDS YP_001313400.1 150376804 5318127 complement(1181714..1182667) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb21180 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 1182667 5318127 Smed_4670 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313400.1 1181714 R 366394 CDS YP_001313401.1 150376805 5318128 1182856..1184043 1 NC_009620.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMb21181 putative glutaryl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 1184043 5318128 Smed_4671 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001313401.1 1182856 D 366394 CDS YP_001313402.1 150376806 5318129 1184052..1185233 1 NC_009620.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sme:SMb21182 putative conserved membrane-anchored protein; L-carnitine dehydratase/bile acid-inducible protein F 1185233 5318129 Smed_4672 Sinorhizobium medicae WSM419 L-carnitine dehydratase/bile acid-inducible protein F YP_001313402.1 1184052 D 366394 CDS YP_001313403.1 150376807 5318130 complement(1185403..1187298) 1 NC_009620.1 molecular chaperone; heat shock protein 90 1187298 5318130 Smed_4673 Sinorhizobium medicae WSM419 heat shock protein 90 YP_001313403.1 1185403 R 366394 CDS YP_001313404.1 150376808 5318131 1187462..1188418 1 NC_009620.1 catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; phosphate acetyltransferase 1188418 5318131 Smed_4674 Sinorhizobium medicae WSM419 phosphate acetyltransferase YP_001313404.1 1187462 D 366394 CDS YP_001313405.1 150376809 5318132 1188420..1189595 1 NC_009620.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1189595 5318132 Smed_4675 Sinorhizobium medicae WSM419 acetate kinase YP_001313405.1 1188420 D 366394 CDS YP_001313406.1 150376810 5318133 complement(1189623..1191098) 1 NC_009620.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMb21185 putative succinate-semialdehyde dehydrogenase (NAD(P)+) protein; succinate-semialdehyde dehydrogenase 1191098 5318133 Smed_4676 Sinorhizobium medicae WSM419 succinate-semialdehyde dehydrogenase YP_001313406.1 1189623 R 366394 CDS YP_001313407.1 150376811 5318134 complement(1191216..1192484) 1 NC_009620.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 1192484 5318134 Smed_4677 Sinorhizobium medicae WSM419 4-aminobutyrate aminotransferase YP_001313407.1 1191216 R 366394 CDS YP_001313408.1 150376812 5318135 1192719..1193549 1 NC_009620.1 PFAM: regulatory protein MerR; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: sme:SMb21187 putative protein, similar to transcriptional regulators MerR and LacI family; MerR family transcriptional regulator 1193549 5318135 Smed_4678 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001313408.1 1192719 D 366394 CDS YP_001313409.1 150376813 5318136 1193844..1194977 1 NC_009620.1 PFAM: acyltransferase 3; KEGG: sme:SMb21188 putative acyltransferase, possibly surface-saccharide specific acetyltransferase protein; acyltransferase 3 1194977 5318136 Smed_4679 Sinorhizobium medicae WSM419 acyltransferase 3 YP_001313409.1 1193844 D 366394 CDS YP_001313410.1 150376814 5318137 1194993..1196096 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb21189 putative glycosyltransferase protein; glycosyl transferase family protein 1196096 5318137 Smed_4680 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313410.1 1194993 D 366394 CDS YP_001313411.1 150376815 5319323 1196098..1197135 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb21190 putative glycosyltransferase protein; glycosyl transferase family protein 1197135 5319323 Smed_4681 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313411.1 1196098 D 366394 CDS YP_001313412.1 150376816 5319324 1197145..1198938 1 NC_009620.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21191 putative surface saccharide exporting ABC transporter protein, consisting of ATP-binding and membrane-spanning domains; ABC transporter-like protein 1198938 5319324 Smed_4682 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313412.1 1197145 D 366394 CDS YP_001313413.1 150376817 5319325 complement(1199003..1200046) 1 NC_009620.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 1200046 5319325 Smed_4683 Sinorhizobium medicae WSM419 fructose-1,6-bisphosphate aldolase YP_001313413.1 1199003 R 366394 CDS YP_001313414.1 150376818 5319326 1200489..1200725 1 NC_009620.1 KEGG: sme:SMb21195 hypothetical protein; hypothetical protein 1200725 5319326 Smed_4684 Sinorhizobium medicae WSM419 hypothetical protein YP_001313414.1 1200489 D 366394 CDS YP_001313415.1 150376819 5319327 1200706..1202304 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb21196 putative oligopeptide uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1202304 5319327 Smed_4685 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313415.1 1200706 D 366394 CDS YP_001313416.1 150376820 5319328 1202356..1203279 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21197 putative oligopeptide uptake ABC transporter permease protein; alkaline phosphatase 1203279 5319328 Smed_4686 Sinorhizobium medicae WSM419 alkaline phosphatase YP_001313416.1 1202356 D 366394 CDS YP_001313417.1 150376821 5319329 1203272..1204402 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21198 putative oligopeptide uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1204402 5319329 Smed_4687 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313417.1 1203272 D 366394 CDS YP_001313418.1 150376822 5319330 1204404..1206005 1 NC_009620.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb21199 putative oligopeptide uptake ABC transporter ATP-binding protein, consisting of 2 fused ATP-binding domains; ABC transporter-like protein 1206005 5319330 Smed_4688 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313418.1 1204404 D 366394 CDS YP_001313419.1 150376823 5319331 complement(1206152..1207495) 1 NC_009620.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sme:SMb21200 putative two-component response regulator protein; two component, sigma54 specific, Fis family transcriptional regulator 1207495 5319331 Smed_4689 Sinorhizobium medicae WSM419 two component, sigma54 specific, Fis family transcriptional regulator YP_001313419.1 1206152 R 366394 CDS YP_001313420.1 150376824 5319332 complement(1207492..1209312) 1 NC_009620.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMb21201 putative two-component sensor histidine kinase protein; integral membrane sensor signal transduction histidine kinase 1209312 5319332 Smed_4690 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001313420.1 1207492 R 366394 CDS YP_001313421.1 150376825 5319333 1209596..1210528 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMb21202 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1210528 5319333 Smed_4691 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001313421.1 1209596 D 366394 CDS YP_001313422.1 150376826 5318831 1210644..1211246 1 NC_009620.1 PFAM: phospholipase/Carboxylesterase; KEGG: sme:SMb21203 putative esteraselipase/thioesterase protein; phospholipase/carboxylesterase 1211246 5318831 Smed_4692 Sinorhizobium medicae WSM419 phospholipase/carboxylesterase YP_001313422.1 1210644 D 366394 CDS YP_001313423.1 150376827 5318832 1211325..1211567 1 NC_009620.1 TIGRFAM: prevent-host-death family protein; KEGG: tbd:Tbd_2423 prevent-host-death protein; prevent-host-death family protein 1211567 5318832 Smed_4693 Sinorhizobium medicae WSM419 prevent-host-death family protein YP_001313423.1 1211325 D 366394 CDS YP_001313424.1 150376828 5318833 1211619..1211948 1 NC_009620.1 KEGG: hha:Hhal_0789 PilT protein domain protein; PilT domain-containing protein 1211948 5318833 Smed_4694 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001313424.1 1211619 D 366394 CDS YP_001313425.1 150376829 5318834 complement(1211952..1213064) 1 NC_009620.1 PFAM: ABC-2 type transporter; KEGG: sme:SMb21204 putative ABC transporter permease protein; ABC-2 type transporter 1213064 5318834 Smed_4695 Sinorhizobium medicae WSM419 ABC-2 type transporter YP_001313425.1 1211952 R 366394 CDS YP_001313426.1 150376830 5318835 complement(1213066..1214220) 1 NC_009620.1 PFAM: ABC-2 type transporter; KEGG: sme:SMb21205 putative ABC transporter permease protein; ABC-2 type transporter 1214220 5318835 Smed_4696 Sinorhizobium medicae WSM419 ABC-2 type transporter YP_001313426.1 1213066 R 366394 CDS YP_001313427.1 150376831 5318836 complement(1214217..1215965) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21206 putative ABC transporter ATP-binding protein, consisting of 2 fused ATP-binding domains; ABC transporter-like protein 1215965 5318836 Smed_4697 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313427.1 1214217 R 366394 CDS YP_001313428.1 150376832 5318837 complement(1215965..1216969) 1 NC_009620.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMb21207 putative protein secretion protein, HlyD family; hypothetical protein 1216969 5318837 Smed_4698 Sinorhizobium medicae WSM419 hypothetical protein YP_001313428.1 1215965 R 366394 CDS YP_001313429.1 150376833 5318838 complement(1216966..1217670) 1 NC_009620.1 PFAM: regulatory protein TetR; Transcriptional regulator TetR; KEGG: sme:SMb21208 putative transcriptional regulator, TetR family protein; TetR family transcriptional regulator 1217670 5318838 Smed_4699 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001313429.1 1216966 R 366394 CDS YP_001313430.1 150376834 5318839 1217856..1218248 1 NC_009620.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01989 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1218248 5318839 Smed_4700 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001313430.1 1217856 D 366394 CDS YP_001313431.1 150376835 5318840 1218387..1218767 1 NC_009620.1 KEGG: sme:SMb21212 hypothetical protein; hypothetical protein 1218767 5318840 Smed_4701 Sinorhizobium medicae WSM419 hypothetical protein YP_001313431.1 1218387 D 366394 CDS YP_001313432.1 150376836 5318841 1218971..1219630 1 NC_009620.1 PFAM: metallophosphoesterase; KEGG: sme:SMb21213 putative serinethreonine protein phosphatase; bis(5'-nucleosyl)-tetraphosphatase 1219630 5318841 Smed_4702 Sinorhizobium medicae WSM419 bis(5'-nucleosyl)-tetraphosphatase YP_001313432.1 1218971 D 366394 CDS YP_001313433.1 150376837 5318853 1219795..1220469 1 NC_009620.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMb21214 putative 2-deoxyglucose-6-phosphate phosphatase protein; HAD family hydrolase 1220469 5318853 Smed_4703 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001313433.1 1219795 D 366394 CDS YP_001313434.1 150376838 5318854 complement(1220545..1221498) 1 NC_009620.1 KEGG: sme:SMb21307 hypothetical protein; hypothetical protein 1221498 5318854 Smed_4704 Sinorhizobium medicae WSM419 hypothetical protein YP_001313434.1 1220545 R 366394 CDS YP_001313435.1 150376839 5318855 complement(1221542..1222864) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21308 putative glycosyltransferase, forming alpha glycosyl linkages protein; group 1 glycosyl transferase 1222864 5318855 Smed_4705 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313435.1 1221542 R 366394 CDS YP_001313436.1 150376840 5318856 complement(1222861..1225068) 1 NC_009620.1 KEGG: sme:SMb21309 hypothetical protein; hypothetical protein 1225068 5318856 Smed_4706 Sinorhizobium medicae WSM419 hypothetical protein YP_001313436.1 1222861 R 366394 CDS YP_001313437.1 150376841 5318857 complement(1225079..1225786) 1 NC_009620.1 KEGG: sme:SMb21310 putative membrane-anchored protein; putative membrane-anchored protein 1225786 5318857 Smed_4707 Sinorhizobium medicae WSM419 putative membrane-anchored protein YP_001313437.1 1225079 R 366394 CDS YP_001313438.1 150376842 5318858 complement(1225798..1227054) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21311 putative glycosyltransferase, forming alpha-gylcosyl linkages protein; group 1 glycosyl transferase 1227054 5318858 Smed_4708 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313438.1 1225798 R 366394 CDS YP_001313439.1 150376843 5318859 complement(1227057..1227902) 1 NC_009620.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMb21312 putative methyltransferase protein; type 11 methyltransferase 1227902 5318859 Smed_4709 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001313439.1 1227057 R 366394 CDS YP_001313440.1 150376844 5318860 complement(1227899..1230148) 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb21313 putative bifunctional glycosyltransferase, forming alpha-glycosyl and beta-glycosyl linkages protein; glycosyl transferase family protein 1230148 5318860 Smed_4710 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313440.1 1227899 R 366394 CDS YP_001313441.1 150376845 5318861 complement(1230274..1230933) 1 NC_009620.1 KEGG: sme:SMb21314 putative secreted calcium-binding protein; putative secreted calcium-binding protein 1230933 5318861 Smed_4711 Sinorhizobium medicae WSM419 putative secreted calcium-binding protein YP_001313441.1 1230274 R 366394 CDS YP_001313442.1 150376846 5318862 complement(1231207..1232628) 1 NC_009620.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: sme:SMb21315 putative protein secretion protein, HlyD family membrane fusion protein, secretes ExpE1; HlyD family type I secretion membrane fusion protein 1232628 5318862 Smed_4712 Sinorhizobium medicae WSM419 HlyD family type I secretion membrane fusion protein YP_001313442.1 1231207 R 366394 CDS YP_001313443.1 150376847 5318863 complement(1232625..1234394) 1 NC_009620.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21316 putative ABC transporter protein, fused ATP-binding and membrane-spanning components, secretes ExpE1; type I secretion system ATPase 1234394 5318863 Smed_4713 Sinorhizobium medicae WSM419 type I secretion system ATPase YP_001313443.1 1232625 R 366394 CDS YP_001313444.1 150376848 5318894 1234615..1235175 1 NC_009620.1 PFAM: regulatory protein MarR; KEGG: sme:SMb21317 transcriptional activator of exopolysaccharide II synthesis, MarR family protein; MarR family transcriptional regulator 1235175 5318894 Smed_4714 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001313444.1 1234615 D 366394 CDS YP_001313445.1 150376849 5318895 1235316..1236563 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21318 putative glycosyltransferase, forming alpha-glycosyl linkages protein; group 1 glycosyl transferase 1236563 5318895 Smed_4715 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313445.1 1235316 D 366394 CDS YP_001313446.1 150376850 5318896 1236732..1238213 1 NC_009620.1 KEGG: sme:SMb21319 putative membrane-anchored protein; putative membrane-anchored protein 1238213 5318896 Smed_4716 Sinorhizobium medicae WSM419 putative membrane-anchored protein YP_001313446.1 1236732 D 366394 CDS YP_001313447.1 150376851 5318897 1238200..1240881 1 NC_009620.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: sme:SMb21320 putative bifunctional glycosyltransferase, forming beta-glycosyl and alpha-glycosyl linkages protein; glycosyl transferase family protein 1240881 5318897 Smed_4717 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313447.1 1238200 D 366394 CDS YP_001313448.1 150376852 5318898 1240917..1242095 1 NC_009620.1 PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21321 putative membrane-anchored protein; polysaccharide pyruvyl transferase 1242095 5318898 Smed_4718 Sinorhizobium medicae WSM419 polysaccharide pyruvyl transferase YP_001313448.1 1240917 D 366394 CDS YP_001313449.1 150376853 5318899 1242136..1243308 1 NC_009620.1 PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21322 putative membrane-anchored protein; polysaccharide pyruvyl transferase 1243308 5318899 Smed_4719 Sinorhizobium medicae WSM419 polysaccharide pyruvyl transferase YP_001313449.1 1242136 D 366394 CDS YP_001313450.1 150376854 5318900 1243283..1244467 1 NC_009620.1 KEGG: sme:SMb21323 putative protein, probably exported to periplasma; hypothetical protein 1244467 5318900 Smed_4720 Sinorhizobium medicae WSM419 hypothetical protein YP_001313450.1 1243283 D 366394 CDS YP_001313451.1 150376855 5318901 1244464..1245372 1 NC_009620.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sme:SMb21324 putative glucose-1-phosphate thymidyltransferase protein; glucose-1-phosphate thymidylyltransferase 1245372 5318901 Smed_4721 Sinorhizobium medicae WSM419 glucose-1-phosphate thymidylyltransferase YP_001313451.1 1244464 D 366394 CDS YP_001313452.1 150376856 5318902 1245365..1245928 1 NC_009620.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sme:SMb21325 putative dTDP-4-dehydrorhamnose 3,5-epimerase protein; dTDP-4-dehydrorhamnose 3,5-epimerase 1245928 5318902 Smed_4722 Sinorhizobium medicae WSM419 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001313452.1 1245365 D 366394 CDS YP_001313453.1 150376857 5318903 1245940..1247010 1 NC_009620.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb21326 putative dTDP-D-glucose 4,6-dehydratase protein; dTDP-glucose 4,6-dehydratase 1247010 5318903 Smed_4723 Sinorhizobium medicae WSM419 dTDP-glucose 4,6-dehydratase YP_001313453.1 1245940 D 366394 CDS YP_001313454.1 150376858 5318904 1247007..1247909 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb21327 putative dTDP-4-dehydrorhamnose reductase protein; dTDP-4-dehydrorhamnose reductase 1247909 5318904 Smed_4724 Sinorhizobium medicae WSM419 dTDP-4-dehydrorhamnose reductase YP_001313454.1 1247007 D 366394 CDS YP_001313455.1 150376859 5319071 complement(1247906..1248724) 1 NC_009620.1 KEGG: sme:SMb21328 putative Sir2-like transcriptional silencer protein; putative Sir2-like transcriptional silencer protein 1248724 5319071 Smed_4725 Sinorhizobium medicae WSM419 putative Sir2-like transcriptional silencer protein YP_001313455.1 1247906 R 366394 CDS YP_001313456.1 150376860 5319072 complement(1248797..1248967) 1 NC_009620.1 KEGG: sme:SMb21329 hypothetical exported peptide protein; hypothetical protein 1248967 5319072 Smed_4726 Sinorhizobium medicae WSM419 hypothetical protein YP_001313456.1 1248797 R 366394 CDS YP_001313457.1 150376861 5319073 1249182..1249391 1 NC_009620.1 PFAM: CsbD family protein; KEGG: sme:SMb21330 hypothetical protein with amino acid permeases signature; CsbD family protein 1249391 5319073 Smed_4727 Sinorhizobium medicae WSM419 CsbD family protein YP_001313457.1 1249182 D 366394 CDS YP_001313458.1 150376862 5319074 1249462..1249959 1 NC_009620.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sme:SMb21332 hypothetical protein; transport-associated protein 1249959 5319074 Smed_4728 Sinorhizobium medicae WSM419 transport-associated protein YP_001313458.1 1249462 D 366394 CDS YP_001313459.1 150376863 5319075 1249996..1250367 1 NC_009620.1 KEGG: sme:SMb21333 hypothetical protein; hypothetical protein 1250367 5319075 Smed_4729 Sinorhizobium medicae WSM419 hypothetical protein YP_001313459.1 1249996 D 366394 CDS YP_001313460.1 150376864 5319076 1250559..1251248 1 NC_009620.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMb21334 hypothetical exported glutamine-rich protein; hypothetical protein 1251248 5319076 Smed_4730 Sinorhizobium medicae WSM419 hypothetical protein YP_001313460.1 1250559 D 366394 CDS YP_001313461.1 150376865 5319077 complement(1251363..1252442) 1 NC_009620.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMb21335 conserved putative membrane protein, possibly a permease; hypothetical protein 1252442 5319077 Smed_4731 Sinorhizobium medicae WSM419 hypothetical protein YP_001313461.1 1251363 R 366394 CDS YP_001313462.1 150376866 5319078 1252737..1253618 1 NC_009620.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMb21336 putative transcriptional regulator, AraC family protein; helix-turn-helix domain-containing protein 1253618 5319078 Smed_4732 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001313462.1 1252737 D 366394 CDS YP_001313463.1 150376867 5319079 1253745..1254404 1 NC_009620.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMb21337 putative iron-sulfur-binding protein, probably subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1254404 5319079 Smed_4733 Sinorhizobium medicae WSM419 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001313463.1 1253745 D 366394 CDS YP_001313464.1 150376868 5319080 1254408..1255394 1 NC_009620.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sme:SMb21338 putative molybdopterin binding protein, probably subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase; FAD-binding molybdopterin dehydrogenase 1255394 5319080 Smed_4734 Sinorhizobium medicae WSM419 FAD-binding molybdopterin dehydrogenase YP_001313464.1 1254408 D 366394 CDS YP_001313465.1 150376869 5319081 1255417..1257693 1 NC_009620.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: xcb:XC_3780 oxidoreductase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 1257693 5319081 Smed_4735 Sinorhizobium medicae WSM419 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001313465.1 1255417 D 366394 CDS YP_001313466.1 150376870 5319104 complement(1257810..1258658) 1 NC_009620.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: sme:SMb21341 hypothetical protein; phytanoyl-CoA dioxygenase 1258658 5319104 Smed_4736 Sinorhizobium medicae WSM419 phytanoyl-CoA dioxygenase YP_001313466.1 1257810 R 366394 CDS YP_001313467.1 150376871 5319105 complement(1258704..1259696) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb21342 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 1259696 5319105 Smed_4737 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313467.1 1258704 R 366394 CDS YP_001313468.1 150376872 5319106 complement(1259709..1260713) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb21343 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 1260713 5319106 Smed_4738 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313468.1 1259709 R 366394 CDS YP_001313469.1 150376873 5319107 complement(1260715..1262208) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21344 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1262208 5319107 Smed_4739 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313469.1 1260715 R 366394 CDS YP_001313470.1 150376874 5319108 complement(1262311..1263294) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21345 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 1263294 5319108 Smed_4740 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313470.1 1262311 R 366394 CDS YP_001313471.1 150376875 5319109 1263518..1264570 1 NC_009620.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21346 putative transcriptional regulator, LacI family protein; periplasmic binding protein/LacI transcriptional regulator 1264570 5319109 Smed_4741 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313471.1 1263518 D 366394 CDS YP_001313472.1 150376876 5319110 complement(1264619..1264954) 1 NC_009620.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb21347 putative pectin degradation protein; cupin 1264954 5319110 Smed_4742 Sinorhizobium medicae WSM419 cupin YP_001313472.1 1264619 R 366394 CDS YP_001313473.1 150376877 5319111 complement(1264964..1265728) 1 NC_009620.1 TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb21348 putative 2-deoxy-D-gluconate 3-dehydrogenase protein; 2-deoxy-D-gluconate 3-dehydrogenase 1265728 5319111 Smed_4743 Sinorhizobium medicae WSM419 2-deoxy-D-gluconate 3-dehydrogenase YP_001313473.1 1264964 R 366394 CDS YP_001313474.1 150376878 5319112 complement(1265725..1266570) 1 NC_009620.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 1266570 5319112 Smed_4744 Sinorhizobium medicae WSM419 5-keto-4-deoxyuronate isomerase YP_001313474.1 1265725 R 366394 CDS YP_001313475.1 150376879 5319113 complement(1266688..1267437) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb21350 putative transcriptional regulator, GntR family protein; GntR family transcriptional regulator 1267437 5319113 Smed_4745 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313475.1 1266688 R 366394 CDS YP_001313476.1 150376880 5319114 complement(1267446..1268729) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb21351 putative C4-dicarboxylate large membrane transport protein; TRAP dicarboxylate transporter subunit DctM 1268729 5319114 Smed_4746 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001313476.1 1267446 R 366394 CDS YP_001313477.1 150376881 5319146 complement(1268734..1269294) 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb21352 putative C4-dicarboxylate small membrane transport protein; tripartite ATP-independent periplasmic transporter DctQ 1269294 5319146 Smed_4747 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001313477.1 1268734 R 366394 CDS YP_001313478.1 150376882 5319147 complement(1269479..1270456) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb21353 putative periplasmic C4-dicarboxylate transport protein; TRAP dicarboxylate transporter subunit DctP 1270456 5319147 Smed_4748 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001313478.1 1269479 R 366394 CDS YP_001313479.1 150376883 5319148 complement(1270488..1271897) 1 NC_009620.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 1271897 5319148 Smed_4749 Sinorhizobium medicae WSM419 glucuronate isomerase YP_001313479.1 1270488 R 366394 CDS YP_001313480.1 150376884 5319149 1272052..1273071 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb21355 putative oxidoreductase protein; oxidoreductase domain-containing protein 1273071 5319149 Smed_4750 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313480.1 1272052 D 366394 CDS YP_001313481.1 150376885 5319150 1273223..1274215 1 NC_009620.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: sme:SMb21356 conserved hypothetical membrane protein; putative ribonuclease BN 1274215 5319150 Smed_4751 Sinorhizobium medicae WSM419 putative ribonuclease BN YP_001313481.1 1273223 D 366394 CDS YP_001313482.1 150376886 5319151 1274319..1274603 1 NC_009620.1 KEGG: sme:SMb21357 hypothetical membrane protein; hypothetical protein 1274603 5319151 Smed_4752 Sinorhizobium medicae WSM419 hypothetical protein YP_001313482.1 1274319 D 366394 CDS YP_001313483.1 150376887 5319152 1274686..1275186 1 NC_009620.1 KEGG: sme:SMb21361 hypothetical membrane-anchored protein; hypothetical protein 1275186 5319152 Smed_4753 Sinorhizobium medicae WSM419 hypothetical protein YP_001313483.1 1274686 D 366394 CDS YP_001313484.1 150376888 5319153 1275198..1275638 1 NC_009620.1 KEGG: sme:SMb21362 hypothetical membrane-anchored protein; hypothetical protein 1275638 5319153 Smed_4754 Sinorhizobium medicae WSM419 hypothetical protein YP_001313484.1 1275198 D 366394 CDS YP_001313485.1 150376889 5319154 1275783..1276769 1 NC_009620.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: sme:SMb21363 conserved hypothetical membrane protein; putative ribonuclease BN 1276769 5319154 Smed_4755 Sinorhizobium medicae WSM419 putative ribonuclease BN YP_001313485.1 1275783 D 366394 CDS YP_001313486.1 150376890 5319155 complement(1276777..1278321) 1 NC_009620.1 similar to L-sorbosone dehydrogenase protein; KEGG: sme:SMb21364 putative membrane-anchored oxidoreductase, similar to L-sorbosone dehydrogenase protein; putative membrane-anchored oxidoreductase 1278321 5319155 Smed_4756 Sinorhizobium medicae WSM419 putative membrane-anchored oxidoreductase YP_001313486.1 1276777 R 366394 CDS YP_001313487.1 150376891 5319156 complement(1278318..1278767) 1 NC_009620.1 KEGG: sme:SMb21365 hypothetical membrane protein; hypothetical protein 1278767 5319156 Smed_4757 Sinorhizobium medicae WSM419 hypothetical protein YP_001313487.1 1278318 R 366394 CDS YP_001313488.1 150376892 5318482 1278946..1279536 1 NC_009620.1 KEGG: sme:SMb21366 hypothetical membrane protein; hypothetical protein 1279536 5318482 Smed_4758 Sinorhizobium medicae WSM419 hypothetical protein YP_001313488.1 1278946 D 366394 CDS YP_001313489.1 150376893 5318483 1279527..1280648 1 NC_009620.1 KEGG: sme:SMb21367 putative cytochrome c class I protein, probably cytochrome c4; cytochrome c class I protein 1280648 5318483 Smed_4759 Sinorhizobium medicae WSM419 cytochrome c class I protein YP_001313489.1 1279527 D 366394 CDS YP_001313490.1 150376894 5318484 1280645..1281628 1 NC_009620.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: sme:SMb21368 putative cytochrome c oxidase chain II protein; cytochrome c oxidase subunit II 1281628 5318484 Smed_4760 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit II YP_001313490.1 1280645 D 366394 CDS YP_001313491.1 150376895 5318485 1281635..1282708 1 NC_009620.1 PFAM: sodium/calcium exchanger membrane region; KEGG: sme:SMb21369 hypothetical protein; sodium/calcium exchanger membrane protein 1282708 5318485 Smed_4761 Sinorhizobium medicae WSM419 sodium/calcium exchanger membrane protein YP_001313491.1 1281635 D 366394 CDS YP_001313492.1 150376896 5318486 1282708..1285230 1 NC_009620.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: sme:SMb21370 putative cytochrome c oxidase chain I protein; cytochrome c oxidase subunit I type 1285230 5318486 Smed_4762 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit I type YP_001313492.1 1282708 D 366394 CDS YP_001313493.1 150376897 5318487 1285236..1285607 1 NC_009620.1 KEGG: sme:SMb21371 hypothetical membrane protein; hypothetical protein 1285607 5318487 Smed_4763 Sinorhizobium medicae WSM419 hypothetical protein YP_001313493.1 1285236 D 366394 CDS YP_001313494.1 150376898 5318488 complement(1285611..1286648) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb21372 putative transcriptional regulator, LacI family protein; periplasmic binding protein/LacI transcriptional regulator 1286648 5318488 Smed_4764 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313494.1 1285611 R 366394 CDS YP_001313495.1 150376899 5318489 complement(1286822..1288102) 1 NC_009620.1 PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: sme:SMb21373 putative sugar kinase protein; tagatose-6-phosphate kinase 1288102 5318489 Smed_4765 Sinorhizobium medicae WSM419 tagatose-6-phosphate kinase YP_001313495.1 1286822 R 366394 CDS YP_001313496.1 150376900 5318490 complement(1288105..1289046) 1 NC_009620.1 PFAM: PfkB domain protein; KEGG: sme:SMb21374 putative sugar kinase, PfkB family protein; ribokinase-like domain-containing protein 1289046 5318490 Smed_4766 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001313496.1 1288105 R 366394 CDS YP_001313497.1 150376901 5318491 complement(1289070..1290032) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb21375 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 1290032 5318491 Smed_4767 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313497.1 1289070 R 366394 CDS YP_001313498.1 150376902 5318492 complement(1290029..1291540) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21376 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1291540 5318492 Smed_4768 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313498.1 1290029 R 366394 CDS YP_001313499.1 150376903 5319250 complement(1291642..1292532) 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21377 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 1292532 5319250 Smed_4769 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313499.1 1291642 R 366394 CDS YP_001313500.1 150376904 5319251 complement(1292725..1293111) 1 NC_009620.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMb21378 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1293111 5319251 Smed_4770 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001313500.1 1292725 R 366394 CDS YP_001313501.1 150376905 5319252 1293322..1293696 1 NC_009620.1 PFAM: protein of unknown function DUF427; KEGG: sme:SMb21379 hypothetical protein; hypothetical protein 1293696 5319252 Smed_4771 Sinorhizobium medicae WSM419 hypothetical protein YP_001313501.1 1293322 D 366394 CDS YP_001313502.1 150376906 5319253 complement(1293858..1294061) 1 NC_009620.1 hypothetical protein 1294061 5319253 Smed_4772 Sinorhizobium medicae WSM419 hypothetical protein YP_001313502.1 1293858 R 366394 CDS YP_001313503.1 150376907 5319254 complement(1294987..1295262) 1 NC_009620.1 hypothetical protein 1295262 5319254 Smed_4773 Sinorhizobium medicae WSM419 hypothetical protein YP_001313503.1 1294987 R 366394 CDS YP_001313504.1 150376908 5319255 complement(1295369..1295560) 1 NC_009620.1 KEGG: sme:SMb21395 hypothetical protein; hypothetical protein 1295560 5319255 Smed_4774 Sinorhizobium medicae WSM419 hypothetical protein YP_001313504.1 1295369 R 366394 CDS YP_001313505.1 150376909 5319256 1295742..1296521 1 NC_009620.1 KEGG: sme:SMb20922 hypothetical protein; chitinase-like protein 1296521 5319256 Smed_4775 Sinorhizobium medicae WSM419 chitinase-like protein YP_001313505.1 1295742 D 366394 CDS YP_001313506.1 150376910 5319257 1296518..1296940 1 NC_009620.1 KEGG: sme:SMb20922 hypothetical protein; hypothetical protein 1296940 5319257 Smed_4776 Sinorhizobium medicae WSM419 hypothetical protein YP_001313506.1 1296518 D 366394 CDS YP_001313507.1 150376911 5319258 1297160..1297564 1 NC_009620.1 PFAM: BA14K family protein; KEGG: sme:SMa0639 hypothetical protein; BA14K family protein 1297564 5319258 Smed_4777 Sinorhizobium medicae WSM419 BA14K family protein YP_001313507.1 1297160 D 366394 CDS YP_001313508.1 150376912 5319259 1297650..1297955 1 NC_009620.1 KEGG: sme:SMb20921 hypothetical protein; hypothetical protein 1297955 5319259 Smed_4778 Sinorhizobium medicae WSM419 hypothetical protein YP_001313508.1 1297650 D 366394 CDS YP_001313509.1 150376913 5319260 1298019..1298180 1 NC_009620.1 KEGG: sme:SMb20920 hypothetical secreted protein; hypothetical protein 1298180 5319260 Smed_4779 Sinorhizobium medicae WSM419 hypothetical protein YP_001313509.1 1298019 D 366394 CDS YP_001313510.1 150376914 5318402 1298335..1298721 1 NC_009620.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_pAT_530 hypothetical protein; transposase IS3/IS911 family protein 1298721 5318402 Smed_4780 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001313510.1 1298335 D 366394 CDS YP_001313511.1 150376915 5318403 1298718..1299062 1 NC_009620.1 PFAM: IS66 Orf2 family protein; KEGG: rle:pRL70145 putative transposase related protein; IS66 Orf2 family protein 1299062 5318403 Smed_4781 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001313511.1 1298718 D 366394 CDS YP_001313512.1 150376916 5318404 1299137..1300729 1 NC_009620.1 PFAM: transposase IS66; KEGG: ret:RHE_CH03056 probable insertion sequence transposase protein; transposase IS66 1300729 5318404 Smed_4782 Sinorhizobium medicae WSM419 transposase IS66 YP_001313512.1 1299137 D 366394 CDS YP_001313513.1 150376917 5318405 1300781..1300978 1 NC_009620.1 KEGG: sme:SMb20920 hypothetical secreted protein; hypothetical protein 1300978 5318405 Smed_4783 Sinorhizobium medicae WSM419 hypothetical protein YP_001313513.1 1300781 D 366394 CDS YP_001313514.1 150376918 5318408 1303585..1305144 1 NC_009620.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: jan:Jann_4239 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 1305144 5318408 Smed_4786 Sinorhizobium medicae WSM419 lipopolysaccharide biosynthesis protein YP_001313514.1 1303585 D 366394 CDS YP_001313515.1 150376919 5318409 1305197..1305964 1 NC_009620.1 KEGG: jan:Jann_4240 ATPases involved in chromosome partitioning-like; chromosome partitioning ATPase 1305964 5318409 Smed_4787 Sinorhizobium medicae WSM419 chromosome partitioning ATPase YP_001313515.1 1305197 D 366394 CDS YP_001313516.1 150376920 5318410 1305981..1306928 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: ace:Acel_1912 glycosyl transferase, family 2; glycosyl transferase family protein 1306928 5318410 Smed_4788 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313516.1 1305981 D 366394 CDS YP_001313517.1 150376921 5318411 complement(1307054..1307260) 1 NC_009620.1 KEGG: syc:syc1984_c hypothetical protein; hypothetical protein 1307260 5318411 Smed_4789 Sinorhizobium medicae WSM419 hypothetical protein YP_001313517.1 1307054 R 366394 CDS YP_001313518.1 150376922 5319021 1307932..1309020 1 NC_009620.1 KEGG: nha:Nham_4600 feruloyl esterase; feruloyl esterase 1309020 5319021 Smed_4792 Sinorhizobium medicae WSM419 feruloyl esterase YP_001313518.1 1307932 D 366394 CDS YP_001313519.1 150376923 5319022 complement(1309136..1309927) 1 NC_009620.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: mmr:Mmar10_2515 glycosyl transferase, WecB/TagA/CpsF family; WecB/TagA/CpsF family glycosyl transferase 1309927 5319022 Smed_4793 Sinorhizobium medicae WSM419 WecB/TagA/CpsF family glycosyl transferase YP_001313519.1 1309136 R 366394 CDS YP_001313520.1 150376924 5319023 1310194..1311414 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: pen:PSEEN2450 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 1311414 5319023 Smed_4794 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313520.1 1310194 D 366394 CDS YP_001313521.1 150376925 5319024 complement(1311520..1312950) 1 NC_009620.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH03244 mannose-1-phosphate guanylyltransferase (GDP) protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1312950 5319024 Smed_4795 Sinorhizobium medicae WSM419 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001313521.1 1311520 R 366394 CDS YP_001313522.1 150376926 5319025 complement(1312947..1314446) 1 NC_009620.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rle:RL3674 putative phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1314446 5319025 Smed_4796 Sinorhizobium medicae WSM419 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001313522.1 1312947 R 366394 CDS YP_001313523.1 150376927 5319026 1314819..1315694 1 NC_009620.1 KEGG: aau:AAur_2156 hypothetical protein; hypothetical protein 1315694 5319026 Smed_4797 Sinorhizobium medicae WSM419 hypothetical protein YP_001313523.1 1314819 D 366394 CDS YP_001313524.1 150376928 5319027 complement(1315756..1316946) 1 NC_009620.1 hypothetical protein 1316946 5319027 Smed_4798 Sinorhizobium medicae WSM419 hypothetical protein YP_001313524.1 1315756 R 366394 CDS YP_001313525.1 150376929 5319028 1317154..1318698 1 NC_009620.1 KEGG: nar:Saro_3228 hypothetical protein; hypothetical protein 1318698 5319028 Smed_4799 Sinorhizobium medicae WSM419 hypothetical protein YP_001313525.1 1317154 D 366394 CDS YP_001313526.1 150376930 5319029 1318973..1319653 1 NC_009620.1 PFAM: sugar transferase; KEGG: pde:Pden_0842 undecaprenyl-phosphate galactose phosphotransferase; undecaprenyl-phosphate galactose phosphotransferase 1319653 5319029 Smed_4800 Sinorhizobium medicae WSM419 undecaprenyl-phosphate galactose phosphotransferase YP_001313526.1 1318973 D 366394 CDS YP_001313527.1 150376931 5319030 complement(1319691..1320470) 1 NC_009620.1 PFAM: regulatory protein LuxR; KEGG: rle:pRL90149 putative transcriptional regulator; two component LuxR family transcriptional regulator 1320470 5319030 Smed_4801 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001313527.1 1319691 R 366394 CDS YP_001313528.1 150376932 5318689 complement(1321175..1322296) 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: aau:AAur_2155 putative glycosyl transferase / polysaccharide biosynthesis domain protein; glycosyl transferase family protein 1322296 5318689 Smed_4802 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313528.1 1321175 R 366394 CDS YP_001313529.1 150376933 5318690 complement(1322312..1323628) 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: lxx:Lxx04950 glycosyl transferase; group 1 glycosyl transferase 1323628 5318690 Smed_4803 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313529.1 1322312 R 366394 CDS YP_001313530.1 150376934 5318691 1324015..1324515 1 NC_009620.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rle:pRL90150 putative hexapeptide repeat acetyltransferase; hexapaptide repeat-containing transferase 1324515 5318691 Smed_4804 Sinorhizobium medicae WSM419 hexapaptide repeat-containing transferase YP_001313530.1 1324015 D 366394 CDS YP_001313531.1 150376935 5318692 1324517..1325542 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rle:pRL90151 putative GFO/IDH/MocA family oxidoreductase; oxidoreductase domain-containing protein 1325542 5318692 Smed_4805 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313531.1 1324517 D 366394 CDS YP_001313532.1 150376936 5318693 1325539..1326645 1 NC_009620.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90152 putative pleiotropic regulator; glutamine--scyllo-inositol transaminase 1326645 5318693 Smed_4806 Sinorhizobium medicae WSM419 glutamine--scyllo-inositol transaminase YP_001313532.1 1325539 D 366394 CDS YP_001313533.1 150376937 5318694 1326635..1327336 1 NC_009620.1 KEGG: ret:RHE_CH01366 hypothetical protein; hypothetical protein 1327336 5318694 Smed_4807 Sinorhizobium medicae WSM419 hypothetical protein YP_001313533.1 1326635 D 366394 CDS YP_001313534.1 150376938 5318695 1327359..1328333 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ret:RHE_CH01367 probable UDP-glucose 4-epimerase protein; NAD-dependent epimerase/dehydratase 1328333 5318695 Smed_4808 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001313534.1 1327359 D 366394 CDS YP_001313535.1 150376939 5318696 1328330..1329523 1 NC_009620.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL90155 putative DegT/DnrJ/EryC1/StrS family aminotransferase; glutamine--scyllo-inositol transaminase 1329523 5318696 Smed_4809 Sinorhizobium medicae WSM419 glutamine--scyllo-inositol transaminase YP_001313535.1 1328330 D 366394 CDS YP_001313536.1 150376940 5318697 complement(1329561..1331069) 1 NC_009620.1 PFAM: polysaccharide biosynthesis protein; KEGG: ret:RHE_CH01369 hypothetical protein; polysaccharide biosynthesis protein 1331069 5318697 Smed_4810 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001313536.1 1329561 R 366394 CDS YP_001313537.1 150376941 5318698 complement(1331075..1331995) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr7553 dTDP-6-deoxy-L-mannose-dehydrogenase; dTDP-4-dehydrorhamnose reductase 1331995 5318698 Smed_4811 Sinorhizobium medicae WSM419 dTDP-4-dehydrorhamnose reductase YP_001313537.1 1331075 R 366394 CDS YP_001313538.1 150376942 5318699 complement(1331992..1333059) 1 NC_009620.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr7552 dTDP-D-glucose-4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1333059 5318699 Smed_4812 Sinorhizobium medicae WSM419 dTDP-glucose 4,6-dehydratase YP_001313538.1 1331992 R 366394 CDS YP_001313539.1 150376943 5318628 complement(1333056..1333637) 1 NC_009620.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sme:SMb21325 putative dTDP-4-dehydrorhamnose 3,5-epimerase protein; dTDP-4-dehydrorhamnose 3,5-epimerase 1333637 5318628 Smed_4813 Sinorhizobium medicae WSM419 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001313539.1 1333056 R 366394 CDS YP_001313540.1 150376944 5318629 complement(1333634..1334512) 1 NC_009620.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mlo:mlr7550 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1334512 5318629 Smed_4814 Sinorhizobium medicae WSM419 glucose-1-phosphate thymidylyltransferase YP_001313540.1 1333634 R 366394 CDS YP_001313541.1 150376945 5318630 complement(1334568..1335872) 1 NC_009620.1 PFAM: polysaccharide export protein; KEGG: rle:pRL90158 putative exopolysaccharide production protein; polysaccharide export protein 1335872 5318630 Smed_4815 Sinorhizobium medicae WSM419 polysaccharide export protein YP_001313541.1 1334568 R 366394 CDS YP_001313542.1 150376946 5318631 1336350..1337096 1 NC_009620.1 PFAM: regulatory protein LuxR; KEGG: atc:AGR_L_3006 hypothetical protein; response regulator receiver protein 1337096 5318631 Smed_4816 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001313542.1 1336350 D 366394 CDS YP_001313543.1 150376947 5318632 complement(1337205..1337843) 1 NC_009620.1 KEGG: bms:BRA0772 hypothetical protein; hypothetical protein 1337843 5318632 Smed_4817 Sinorhizobium medicae WSM419 hypothetical protein YP_001313543.1 1337205 R 366394 CDS YP_001313544.1 150376948 5318637 1340802..1341533 1 NC_009620.1 PFAM: cyclic nucleotide-binding; KEGG: sme:SMb21079 putative transcriptional regulator protein; cyclic nucleotide-binding protein 1341533 5318637 Smed_4822 Sinorhizobium medicae WSM419 cyclic nucleotide-binding protein YP_001313544.1 1340802 D 366394 CDS YP_001313545.1 150376949 5318958 1342428..1342667 1 NC_009620.1 KEGG: sme:SMc03284 hypothetical/unknown protein; hypothetical protein 1342667 5318958 Smed_4825 Sinorhizobium medicae WSM419 hypothetical protein YP_001313545.1 1342428 D 366394 CDS YP_001313546.1 150376950 5318959 1343016..1343819 1 NC_009620.1 PFAM: regulatory protein LuxR; KEGG: sme:SMb21080 putative response regulator protein; two component LuxR family transcriptional regulator 1343819 5318959 Smed_4826 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001313546.1 1343016 D 366394 CDS YP_001313547.1 150376951 5318960 complement(1344001..1344258) 1 NC_009620.1 KEGG: sme:SMc00940 hypothetical protein; hypothetical protein 1344258 5318960 Smed_4827 Sinorhizobium medicae WSM419 hypothetical protein YP_001313547.1 1344001 R 366394 CDS YP_001313548.1 150376952 5318961 complement(1344443..1344718) 1 NC_009620.1 KEGG: sme:SMc02316 hypothetical protein; hypothetical protein 1344718 5318961 Smed_4828 Sinorhizobium medicae WSM419 hypothetical protein YP_001313548.1 1344443 R 366394 CDS YP_001313549.1 150376953 5318962 complement(1344843..1345037) 1 NC_009620.1 hypothetical protein 1345037 5318962 Smed_4829 Sinorhizobium medicae WSM419 hypothetical protein YP_001313549.1 1344843 R 366394 CDS YP_001313550.1 150376954 5318963 1345338..1345733 1 NC_009620.1 PFAM: response regulator receiver; KEGG: sme:SMa0293 response regulator; response regulator receiver protein 1345733 5318963 Smed_4830 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001313550.1 1345338 D 366394 CDS YP_001313551.1 150376955 5318964 1345997..1346149 1 NC_009620.1 hypothetical protein 1346149 5318964 Smed_4831 Sinorhizobium medicae WSM419 hypothetical protein YP_001313551.1 1345997 D 366394 CDS YP_001313552.1 150376956 5318965 1346146..1346295 1 NC_009620.1 hypothetical protein 1346295 5318965 Smed_4832 Sinorhizobium medicae WSM419 hypothetical protein YP_001313552.1 1346146 D 366394 CDS YP_001313553.1 150376957 5318966 complement(1346407..1346577) 1 NC_009620.1 KEGG: sme:SMb21682 hypothetical protein; hypothetical protein 1346577 5318966 Smed_4833 Sinorhizobium medicae WSM419 hypothetical protein YP_001313553.1 1346407 R 366394 CDS YP_001313554.1 150376958 5318967 complement(1346574..1347026) 1 NC_009620.1 KEGG: sme:SMb20913 hypothetical protein; hypothetical protein 1347026 5318967 Smed_4834 Sinorhizobium medicae WSM419 hypothetical protein YP_001313554.1 1346574 R 366394 CDS YP_001313555.1 150376959 5318441 1347147..1347974 1 NC_009620.1 PFAM: ATP dependent DNA ligase; KEGG: sme:SMb20912 putative ATP-dependent DNA ligase protein; ATP dependent DNA ligase 1347974 5318441 Smed_4835 Sinorhizobium medicae WSM419 ATP dependent DNA ligase YP_001313555.1 1347147 D 366394 CDS YP_001313556.1 150376960 5318443 1348271..1348477 1 NC_009620.1 KEGG: sme:SMb20911 hypothetical protein; hypothetical protein 1348477 5318443 Smed_4837 Sinorhizobium medicae WSM419 hypothetical protein YP_001313556.1 1348271 D 366394 CDS YP_001313557.1 150376961 5318444 1348704..1349012 1 NC_009620.1 KEGG: sme:SMb20910 hypothetical protein; hypothetical protein 1349012 5318444 Smed_4838 Sinorhizobium medicae WSM419 hypothetical protein YP_001313557.1 1348704 D 366394 CDS YP_001313558.1 150376962 5318445 complement(1349164..1349460) 1 NC_009620.1 hypothetical protein 1349460 5318445 Smed_4839 Sinorhizobium medicae WSM419 hypothetical protein YP_001313558.1 1349164 R 366394 CDS YP_001313559.1 150376963 5318446 complement(1349450..1349620) 1 NC_009620.1 KEGG: sme:SMb21681 hypothetical protein; hypothetical protein 1349620 5318446 Smed_4840 Sinorhizobium medicae WSM419 hypothetical protein YP_001313559.1 1349450 R 366394 CDS YP_001313560.1 150376964 5318447 1349715..1349870 1 NC_009620.1 KEGG: sme:SMb21680 hypothetical protein; hypothetical protein 1349870 5318447 Smed_4841 Sinorhizobium medicae WSM419 hypothetical protein YP_001313560.1 1349715 D 366394 CDS YP_001313561.1 150376965 5318448 1349901..1350260 1 NC_009620.1 PFAM: protein of unknown function DUF1452; KEGG: sme:SMb20908 hypothetical protein; hypothetical protein 1350260 5318448 Smed_4842 Sinorhizobium medicae WSM419 hypothetical protein YP_001313561.1 1349901 D 366394 CDS YP_001313562.1 150376966 5318449 complement(1350850..1351344) 1 NC_009620.1 hypothetical protein 1351344 5318449 Smed_4843 Sinorhizobium medicae WSM419 hypothetical protein YP_001313562.1 1350850 R 366394 CDS YP_001313563.1 150376967 5318451 1351819..1353336 1 NC_009620.1 KEGG: psb:Psyr_2843 C-5 cytosine-specific DNA methylase; hypothetical protein 1353336 5318451 Smed_4845 Sinorhizobium medicae WSM419 hypothetical protein YP_001313563.1 1351819 D 366394 CDS YP_001313564.1 150376968 5318251 1353333..1353596 1 NC_009620.1 hypothetical protein 1353596 5318251 Smed_4846 Sinorhizobium medicae WSM419 hypothetical protein YP_001313564.1 1353333 D 366394 CDS YP_001313565.1 150376969 5318252 1353621..1353962 1 NC_009620.1 KEGG: sme:SMb20548 hypothetical protein; hypothetical protein 1353962 5318252 Smed_4847 Sinorhizobium medicae WSM419 hypothetical protein YP_001313565.1 1353621 D 366394 CDS YP_001313566.1 150376970 5318253 1353959..1354261 1 NC_009620.1 KEGG: sme:SMb20548 hypothetical protein; hypothetical protein 1354261 5318253 Smed_4848 Sinorhizobium medicae WSM419 hypothetical protein YP_001313566.1 1353959 D 366394 CDS YP_001313567.1 150376971 5318254 1354437..1354664 1 NC_009620.1 hypothetical protein 1354664 5318254 Smed_4849 Sinorhizobium medicae WSM419 hypothetical protein YP_001313567.1 1354437 D 366394 CDS YP_001313568.1 150376972 5318255 complement(1354735..1354986) 1 NC_009620.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: rpe:RPE_3305 acyl carrier protein; acyl carrier protein 1354986 5318255 Smed_4850 Sinorhizobium medicae WSM419 acyl carrier protein YP_001313568.1 1354735 R 366394 CDS YP_001313569.1 150376973 5318256 complement(1355192..1355329) 1 NC_009620.1 KEGG: sme:SMb21026 hypothetical exopeptide protein; exopeptide protein 1355329 5318256 Smed_4851 Sinorhizobium medicae WSM419 exopeptide protein YP_001313569.1 1355192 R 366394 CDS YP_001313570.1 150376974 5318257 complement(1355512..1355730) 1 NC_009620.1 KEGG: mlo:mll4695 hypothetical protein; hypothetical protein 1355730 5318257 Smed_4852 Sinorhizobium medicae WSM419 hypothetical protein YP_001313570.1 1355512 R 366394 CDS YP_001313571.1 150376975 5318258 1356087..1356344 1 NC_009620.1 hypothetical protein 1356344 5318258 Smed_4853 Sinorhizobium medicae WSM419 hypothetical protein YP_001313571.1 1356087 D 366394 CDS YP_001313572.1 150376976 5318260 1357055..1357348 1 NC_009620.1 KEGG: mlo:mlr8001 hypothetical protein; hypothetical protein 1357348 5318260 Smed_4855 Sinorhizobium medicae WSM419 hypothetical protein YP_001313572.1 1357055 D 366394 CDS YP_001313573.1 150376977 5318261 1357691..1357942 1 NC_009620.1 PFAM: Transglycosylase-associated protein; KEGG: sme:SMa1766 hypothetical protein; transglycosylase-associated protein 1357942 5318261 Smed_4856 Sinorhizobium medicae WSM419 transglycosylase-associated protein YP_001313573.1 1357691 D 366394 CDS YP_001313574.1 150376978 5318842 1357971..1358456 1 NC_009620.1 PFAM: protein of unknown function DUF937; KEGG: sme:SMa1765 hypothetical protein; hypothetical protein 1358456 5318842 Smed_4857 Sinorhizobium medicae WSM419 hypothetical protein YP_001313574.1 1357971 D 366394 CDS YP_001313575.1 150376979 5318843 complement(1358503..1359978) 1 NC_009620.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMb21525 putative transcriptional regulator protein; GntR family transcriptional regulator 1359978 5318843 Smed_4858 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313575.1 1358503 R 366394 CDS YP_001313576.1 150376980 5318844 1360143..1361162 1 NC_009620.1 TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: sme:SMb21526 putative taurine uptake ABC transporter periplasmic solute-binding protein precursor; taurine ABC transporter periplasmic binding protein 1361162 5318844 Smed_4859 Sinorhizobium medicae WSM419 taurine ABC transporter periplasmic binding protein YP_001313576.1 1360143 D 366394 CDS YP_001313577.1 150376981 5318845 1361253..1362065 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21527 putative taurin uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1362065 5318845 Smed_4860 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313577.1 1361253 D 366394 CDS YP_001313578.1 150376982 5318846 1362058..1362885 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21528 putative taurine uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1362885 5318846 Smed_4861 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313578.1 1362058 D 366394 CDS YP_001313579.1 150376983 5318847 1363005..1363391 1 NC_009620.1 PFAM: protein of unknown function DUF1486; KEGG: sme:SMb21670 taurine dehydrogenase small subunit; hypothetical protein 1363391 5318847 Smed_4862 Sinorhizobium medicae WSM419 hypothetical protein YP_001313579.1 1363005 D 366394 CDS YP_001313580.1 150376984 5318848 1363416..1364816 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMb21529 taurine dehydrogenase large subunit; FAD dependent oxidoreductase 1364816 5318848 Smed_4863 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313580.1 1363416 D 366394 CDS YP_001313581.1 150376985 5318849 complement(1364828..1365592) 1 NC_009620.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reh:H16_A2746 transcriptional regulator, IclR-family; transcriptional regulator IclR 1365592 5318849 Smed_4864 Sinorhizobium medicae WSM419 transcriptional regulator IclR YP_001313581.1 1364828 R 366394 CDS YP_001313582.1 150376986 5318850 1365728..1367347 1 NC_009620.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: reh:H16_B1851 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1367347 5318850 Smed_4865 Sinorhizobium medicae WSM419 glucose-methanol-choline oxidoreductase YP_001313582.1 1365728 D 366394 CDS YP_001313583.1 150376987 5318851 1367370..1368707 1 NC_009620.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pde:Pden_4279 major facilitator superfamily MFS_1; major facilitator transporter 1368707 5318851 Smed_4866 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313583.1 1367370 D 366394 CDS YP_001313584.1 150376988 5318852 1368718..1370493 1 NC_009620.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase 1370493 5318852 Smed_4867 Sinorhizobium medicae WSM419 sulfoacetaldehyde acetyltransferase YP_001313584.1 1368718 D 366394 CDS YP_001313585.1 150376989 5318915 1370553..1371590 1 NC_009620.1 PFAM: conserved hypothetical protein 698; KEGG: sme:SMb21531 hypothetical protein; hypothetical protein 1371590 5318915 Smed_4868 Sinorhizobium medicae WSM419 hypothetical protein YP_001313585.1 1370553 D 366394 CDS YP_001313586.1 150376990 5318916 1371590..1372624 1 NC_009620.1 TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: sme:SMb21532 putative phosphate acetyltransferase protein; phosphate acetyltransferase 1372624 5318916 Smed_4869 Sinorhizobium medicae WSM419 phosphate acetyltransferase YP_001313586.1 1371590 D 366394 CDS YP_001313587.1 150376991 5318917 1372624..1373490 1 NC_009620.1 PFAM: regulatory protein GntR HTH; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMb21533 putative transcriptional regulator, GntR family protein; DeoR family transcriptional regulator 1373490 5318917 Smed_4870 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001313587.1 1372624 D 366394 CDS YP_001313588.1 150376992 5318918 1373571..1376048 1 NC_009620.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMb21534 putative dehydrogenase protein; FAD dependent oxidoreductase 1376048 5318918 Smed_4871 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313588.1 1373571 D 366394 CDS YP_001313589.1 150376993 5318919 complement(1376052..1376939) 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb21535 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 1376939 5318919 Smed_4872 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313589.1 1376052 R 366394 CDS YP_001313590.1 150376994 5318920 1377033..1378706 1 NC_009620.1 PFAM: Na+cotransporter; PhoU family protein; KEGG: sme:SMb21536 hypothetical protein; Na+cotransporter 1378706 5318920 Smed_4873 Sinorhizobium medicae WSM419 Na+cotransporter YP_001313590.1 1377033 D 366394 CDS YP_001313591.1 150376995 5318921 1378806..1380002 1 NC_009620.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase 1380002 5318921 Smed_4874 Sinorhizobium medicae WSM419 2-aminoethylphosphonate--pyruvate transaminase YP_001313591.1 1378806 D 366394 CDS YP_001313592.1 150376996 5318922 1380029..1381303 1 NC_009620.1 TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: sme:SMb21538 putative phosphonoacetate hydrolase protein; phosphonoacetate hydrolase 1381303 5318922 Smed_4875 Sinorhizobium medicae WSM419 phosphonoacetate hydrolase YP_001313592.1 1380029 D 366394 CDS YP_001313593.1 150376997 5318923 1381300..1382757 1 NC_009620.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb21539 putative aldehyde dehydrogenase protein; aldehyde dehydrogenase 1382757 5318923 Smed_4876 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001313593.1 1381300 D 366394 CDS YP_001313594.1 150376998 5318924 1382989..1384011 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21540 putative iron uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1384011 5318924 Smed_4877 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313594.1 1382989 D 366394 CDS YP_001313595.1 150376999 5318925 1384151..1385314 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21541 putative iron ABC transporter ATP-binding protein; ABC transporter-like protein 1385314 5318925 Smed_4878 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313595.1 1384151 D 366394 CDS YP_001313596.1 150377000 5318041 1385320..1387353 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21542 putative iron uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1387353 5318041 Smed_4879 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313596.1 1385320 D 366394 CDS YP_001313597.1 150377001 5318042 complement(1387380..1388714) 1 NC_009620.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: sme:SMa0599 hypothetical protein; hypothetical protein 1388714 5318042 Smed_4880 Sinorhizobium medicae WSM419 hypothetical protein YP_001313597.1 1387380 R 366394 CDS YP_001313598.1 150377002 5318043 complement(1388942..1390759) 1 NC_009620.1 KEGG: sme:SMa0601 hypothetical protein; hypothetical protein 1390759 5318043 Smed_4881 Sinorhizobium medicae WSM419 hypothetical protein YP_001313598.1 1388942 R 366394 CDS YP_001313599.1 150377003 5318044 1391076..1392521 1 NC_009620.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: sme:SMa0610 hypothetical protein; hypothetical protein 1392521 5318044 Smed_4882 Sinorhizobium medicae WSM419 hypothetical protein YP_001313599.1 1391076 D 366394 CDS YP_001313600.1 150377004 5318045 1392681..1393013 1 NC_009620.1 KEGG: rle:RL2265 hypothetical protein; hypothetical protein 1393013 5318045 Smed_4883 Sinorhizobium medicae WSM419 hypothetical protein YP_001313600.1 1392681 D 366394 CDS YP_001313601.1 150377005 5318046 1393178..1393402 1 NC_009620.1 KEGG: sme:SMc00958 hypothetical/unknown protein; hypothetical protein 1393402 5318046 Smed_4884 Sinorhizobium medicae WSM419 hypothetical protein YP_001313601.1 1393178 D 366394 CDS YP_001313602.1 150377006 5318047 1393572..1394573 1 NC_009620.1 PFAM: Integrase catalytic region; KEGG: sme:SMa2047 TRm24 putative transposase; integrase catalytic region 1394573 5318047 Smed_4885 Sinorhizobium medicae WSM419 integrase catalytic region YP_001313602.1 1393572 D 366394 CDS YP_001313603.1 150377007 5318048 1394699..1396072 1 NC_009620.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00137 putative insertion sequence transposase protein; integrase catalytic region 1396072 5318048 Smed_4886 Sinorhizobium medicae WSM419 integrase catalytic region YP_001313603.1 1394699 D 366394 CDS YP_001313604.1 150377008 5318049 complement(1396401..1398509) 1 NC_009620.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMb21570 putative NADH-dependent oxidase protein; NADH:flavin oxidoreductase 1398509 5318049 Smed_4887 Sinorhizobium medicae WSM419 NADH:flavin oxidoreductase YP_001313604.1 1396401 R 366394 CDS YP_001313605.1 150377009 5318050 1398593..1399222 1 NC_009620.1 PFAM: regulatory protein TetR; KEGG: sme:SMb21571 putative transcriptional regulator TetR family protein; TetR family transcriptional regulator 1399222 5318050 Smed_4888 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001313605.1 1398593 D 366394 CDS YP_001313606.1 150377010 5318051 1399372..1400373 1 NC_009620.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMb21572 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; glycine betaine ABC transporter substrate-binding protein 1400373 5318051 Smed_4889 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001313606.1 1399372 D 366394 CDS YP_001313607.1 150377011 5318228 1400522..1401505 1 NC_009620.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMb21573 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1401505 5318228 Smed_4890 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001313607.1 1400522 D 366394 CDS YP_001313608.1 150377012 5318229 complement(1401581..1402231) 1 NC_009620.1 PFAM: Glutathione S-transferase domain; KEGG: rle:RL1444 putative glutathione S-transferase I; glutathione S-transferase domain-containing protein 1402231 5318229 Smed_4891 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001313608.1 1401581 R 366394 CDS YP_001313609.1 150377013 5318230 complement(1402319..1403518) 1 NC_009620.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMb21575 putative transport protein; major facilitator transporter 1403518 5318230 Smed_4892 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313609.1 1402319 R 366394 CDS YP_001313610.1 150377014 5318231 complement(1403519..1403884) 1 NC_009620.1 PFAM: regulatory protein ArsR; KEGG: sme:SMb21576 putative regulatory protein, ArsR family; regulatory protein ArsR 1403884 5318231 Smed_4893 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001313610.1 1403519 R 366394 CDS YP_001313611.1 150377015 5318232 1404056..1404379 1 NC_009620.1 hypothetical protein 1404379 5318232 Smed_4894 Sinorhizobium medicae WSM419 hypothetical protein YP_001313611.1 1404056 D 366394 CDS YP_001313612.1 150377016 5318233 complement(1404605..1405108) 1 NC_009620.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pde:Pden_5003 cupin 2, conserved barrel domain protein; cupin 1405108 5318233 Smed_4895 Sinorhizobium medicae WSM419 cupin YP_001313612.1 1404605 R 366394 CDS YP_001313613.1 150377017 5318234 complement(1405172..1406377) 1 NC_009620.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc03937 putative adenylate/guanylate cyclase protein; putative adenylate/guanylate cyclase 1406377 5318234 Smed_4896 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001313613.1 1405172 R 366394 CDS YP_001313614.1 150377018 5318235 1406561..1409044 1 NC_009620.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sme:SMb21578 putative copper-transporting P-type ATPase protein; heavy metal translocating P-type ATPase 1409044 5318235 Smed_4897 Sinorhizobium medicae WSM419 heavy metal translocating P-type ATPase YP_001313614.1 1406561 D 366394 CDS YP_001313615.1 150377019 5318236 1409194..1409637 1 NC_009620.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sme:SMb21579 putative transcriptional regulator, merR family protein; MerR family transcriptional regulator 1409637 5318236 Smed_4898 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001313615.1 1409194 D 366394 CDS YP_001313616.1 150377020 5318237 1409881..1410972 1 NC_009620.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMb21581 putative glycosyltransferase; group 1 glycosyl transferase 1410972 5318237 Smed_4899 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001313616.1 1409881 D 366394 CDS YP_001313617.1 150377021 5318238 1411022..1411648 1 NC_009620.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: sme:SMb21582 putative ExoD-like membrane protein; exopolysaccharide synthesis ExoD 1411648 5318238 Smed_4900 Sinorhizobium medicae WSM419 exopolysaccharide synthesis ExoD YP_001313617.1 1411022 D 366394 CDS YP_001313618.1 150377022 5318239 1411813..1412025 1 NC_009620.1 KEGG: sme:SMb21583 hypothetical protein; hypothetical protein 1412025 5318239 Smed_4901 Sinorhizobium medicae WSM419 hypothetical protein YP_001313618.1 1411813 D 366394 CDS YP_001313619.1 150377023 5317880 complement(1412815..1414074) 1 NC_009620.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sme:SMb21045 putative reverse transcriptasematurase protein; RNA-directed DNA polymerase 1414074 5317880 Smed_4903 Sinorhizobium medicae WSM419 RNA-directed DNA polymerase YP_001313619.1 1412815 R 366394 CDS YP_001313620.1 150377024 5317881 1414207..1414527 1 NC_009620.1 hypothetical protein 1414527 5317881 Smed_4904 Sinorhizobium medicae WSM419 hypothetical protein YP_001313620.1 1414207 D 366394 CDS YP_001313621.1 150377025 5317882 1414605..1414793 1 NC_009620.1 KEGG: sme:SMb21584 hypothetical protein; hypothetical protein 1414793 5317882 Smed_4905 Sinorhizobium medicae WSM419 hypothetical protein YP_001313621.1 1414605 D 366394 CDS YP_001313622.1 150377026 5317883 1414790..1416673 1 NC_009620.1 PFAM: protein of unknown function DUF1704; KEGG: sme:SMb21585 hypothetical protein; hypothetical protein 1416673 5317883 Smed_4906 Sinorhizobium medicae WSM419 hypothetical protein YP_001313622.1 1414790 D 366394 CDS YP_001313623.1 150377027 5317884 1416685..1417731 1 NC_009620.1 The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 1417731 5317884 Smed_4907 Sinorhizobium medicae WSM419 glutathione synthetase YP_001313623.1 1416685 D 366394 CDS YP_001313624.1 150377028 5317885 1417869..1418831 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21587 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 1418831 5317885 Smed_4908 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313624.1 1417869 D 366394 CDS YP_001313625.1 150377029 5317886 1418920..1420437 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21588 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1420437 5317886 Smed_4909 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313625.1 1418920 D 366394 CDS YP_001313626.1 150377030 5317887 1420437..1421459 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb21589 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 1421459 5317887 Smed_4910 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313626.1 1420437 D 366394 CDS YP_001313627.1 150377031 5317888 1421456..1422424 1 NC_009620.1 membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF 1422424 5317888 Smed_4911 Sinorhizobium medicae WSM419 inner membrane ABC transporter permease YjfF YP_001313627.1 1421456 D 366394 CDS YP_001313628.1 150377032 5317889 1422442..1423176 1 NC_009620.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMb21591 putative transcriptional regulator, GntR family protein; GntR family transcriptional regulator 1423176 5317889 Smed_4912 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313628.1 1422442 D 366394 CDS YP_001313629.1 150377033 5319125 complement(1423315..1424466) 1 NC_009620.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21592 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1424466 5319125 Smed_4913 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313629.1 1423315 R 366394 CDS YP_001313630.1 150377034 5319126 complement(1424463..1425290) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21593 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1425290 5319126 Smed_4914 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313630.1 1424463 R 366394 CDS YP_001313631.1 150377035 5319127 complement(1425287..1426189) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21594 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1426189 5319127 Smed_4915 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313631.1 1425287 R 366394 CDS YP_001313632.1 150377036 5319128 complement(1426382..1427614) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21595 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1427614 5319128 Smed_4916 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313632.1 1426382 R 366394 CDS YP_001313633.1 150377037 5319129 complement(1427677..1428579) 1 NC_009620.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMb21596 hypothetical protein; xylose isomerase domain-containing protein 1428579 5319129 Smed_4917 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001313633.1 1427677 R 366394 CDS YP_001313634.1 150377038 5319130 complement(1428592..1429584) 1 NC_009620.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMb21597 putative exported oxidoreductase protein; oxidoreductase domain-containing protein 1429584 5319130 Smed_4918 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313634.1 1428592 R 366394 CDS YP_001313635.1 150377039 5319131 1429854..1430903 1 NC_009620.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMb21598 putative transcriptional regulator protein; periplasmic binding protein/LacI transcriptional regulator 1430903 5319131 Smed_4919 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313635.1 1429854 D 366394 CDS YP_001313636.1 150377040 5319132 1431105..1431404 1 NC_009620.1 KEGG: sme:SMb21599 hypothetical protein; hypothetical protein 1431404 5319132 Smed_4920 Sinorhizobium medicae WSM419 hypothetical protein YP_001313636.1 1431105 D 366394 CDS YP_001313637.1 150377041 5319133 complement(1431481..1432641) 1 NC_009620.1 PFAM: beta-lactamase; KEGG: sme:SMb21600 putative exported beta-lactamase protein; beta-lactamase 1432641 ampC 5319133 ampC Sinorhizobium medicae WSM419 beta-lactamase YP_001313637.1 1431481 R 366394 CDS YP_001313638.1 150377042 5319135 1433129..1434250 1 NC_009620.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: sme:SMb20925 hypothetical protein; peptidase M50 1434250 5319135 Smed_4923 Sinorhizobium medicae WSM419 peptidase M50 YP_001313638.1 1433129 D 366394 CDS YP_001313639.1 150377043 5318240 1434405..1434905 1 NC_009620.1 KEGG: sme:SMb20926 hypothetical protein; hypothetical protein 1434905 5318240 Smed_4924 Sinorhizobium medicae WSM419 hypothetical protein YP_001313639.1 1434405 D 366394 CDS YP_001313640.1 150377044 5318241 1434970..1435413 1 NC_009620.1 PFAM: protein of unknown function DUF305; KEGG: rme:Rmet_2287 protein of unknown function DUF305; hypothetical protein 1435413 5318241 Smed_4925 Sinorhizobium medicae WSM419 hypothetical protein YP_001313640.1 1434970 D 366394 CDS YP_001313641.1 150377045 5318242 complement(1435465..1435944) 1 NC_009620.1 KEGG: sme:SMb20927 hypothetical protein; hypothetical protein 1435944 5318242 Smed_4926 Sinorhizobium medicae WSM419 hypothetical protein YP_001313641.1 1435465 R 366394 CDS YP_001313642.1 150377046 5318243 1436117..1437367 1 NC_009620.1 PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: sme:SMb20928 putative exported carboxyl-terminal protease protein; peptidase S41 1437367 5318243 Smed_4927 Sinorhizobium medicae WSM419 peptidase S41 YP_001313642.1 1436117 D 366394 CDS YP_001313643.1 150377047 5318244 complement(1437405..1438403) 1 NC_009620.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20929 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 1438403 5318244 Smed_4928 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313643.1 1437405 R 366394 CDS YP_001313644.1 150377048 5318245 complement(1438433..1439173) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20930 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1439173 5318245 Smed_4929 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313644.1 1438433 R 366394 CDS YP_001313645.1 150377049 5318246 1439595..1440584 1 NC_009620.1 KEGG: sme:SMb20931 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; putative sugar uptake ABC transporter periplasmic solute-binding protein 1440584 5318246 Smed_4930 Sinorhizobium medicae WSM419 putative sugar uptake ABC transporter periplasmic solute-binding protein YP_001313645.1 1439595 D 366394 CDS YP_001313646.1 150377050 5318247 complement(1440647..1442044) 1 NC_009620.1 PFAM: glycoside hydrolase family 16; Hemolysin-type calcium-binding region; KEGG: sme:SMb20932 endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein; glycoside hydrolase family protein 1442044 5318247 Smed_4931 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001313646.1 1440647 R 366394 CDS YP_001313647.1 150377051 5318248 1442210..1444933 1 NC_009620.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sme:SMb20933 putative two-component sensor histidine kinase protein; signal transduction histidine kinase 1444933 5318248 Smed_4932 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001313647.1 1442210 D 366394 CDS YP_001313648.1 150377052 5318249 1444930..1445295 1 NC_009620.1 PFAM: response regulator receiver; KEGG: sme:SMb20934 putative two-component response regulator protein; response regulator receiver protein 1445295 5318249 Smed_4933 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001313648.1 1444930 D 366394 CDS YP_001313649.1 150377053 5318250 complement(1445354..1445605) 1 NC_009620.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMb20935 putative transcriptional regulator protein; XRE family transcriptional regulator 1445605 5318250 Smed_4934 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313649.1 1445354 R 366394 CDS YP_001313650.1 150377054 5318262 1445713..1445916 1 NC_009620.1 hypothetical protein 1445916 5318262 Smed_4935 Sinorhizobium medicae WSM419 hypothetical protein YP_001313650.1 1445713 D 366394 CDS YP_001313651.1 150377055 5318263 1446421..1448241 1 NC_009620.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; KEGG: sme:SMb20937 putative ABC transporter protein consisting of fused ATP-binding and permease components; ABC transporter 1448241 5318263 Smed_4936 Sinorhizobium medicae WSM419 ABC transporter YP_001313651.1 1446421 D 366394 CDS YP_001313652.1 150377056 5318264 complement(1448254..1448991) 1 NC_009620.1 PFAM: Radical SAM domain protein; KEGG: sme:SMb20938 hypothetical protein; radical SAM domain-containing protein 1448991 5318264 Smed_4937 Sinorhizobium medicae WSM419 radical SAM domain-containing protein YP_001313652.1 1448254 R 366394 CDS YP_001313653.1 150377057 5318265 complement(1448988..1449344) 1 NC_009620.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: sme:SMb20939 6-pyruvoyltetrahydropterin synthase; putative 6-pyruvoyl tetrahydropterin synthase 1449344 5318265 Smed_4938 Sinorhizobium medicae WSM419 putative 6-pyruvoyl tetrahydropterin synthase YP_001313653.1 1448988 R 366394 CDS YP_001313654.1 150377058 5318266 complement(1449344..1450054) 1 NC_009620.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: sme:SMb20940 hypothetical protein; exsB protein 1450054 5318266 Smed_4939 Sinorhizobium medicae WSM419 exsB protein YP_001313654.1 1449344 R 366394 CDS YP_001313655.1 150377059 5318267 1450273..1451187 1 NC_009620.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rsp:RSP_2053 possible transporter, RarD family, DMT superfamily; hypothetical protein 1451187 5318267 Smed_4940 Sinorhizobium medicae WSM419 hypothetical protein YP_001313655.1 1450273 D 366394 CDS YP_001313656.1 150377060 5318268 complement(1451368..1453182) 1 NC_009620.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20941 msbA-like saccharide exporting ABC transporter protein, consisting of ATP-binding and permease domains; ABC transporter-like protein 1453182 5318268 Smed_4941 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313656.1 1451368 R 366394 CDS YP_001313657.1 150377061 5318269 1453711..1454697 1 NC_009620.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMb20942 UDP glucose 4-epimerase protein; UDP-glucose 4-epimerase 1454697 5318269 Smed_4942 Sinorhizobium medicae WSM419 UDP-glucose 4-epimerase YP_001313657.1 1453711 D 366394 CDS YP_001313658.1 150377062 5318270 complement(1454765..1455772) 1 NC_009620.1 PFAM: acyltransferase 3; KEGG: sme:SMb20943 acetyltransferase protein; acyltransferase 3 1455772 5318270 Smed_4943 Sinorhizobium medicae WSM419 acyltransferase 3 YP_001313658.1 1454765 R 366394 CDS YP_001313659.1 150377063 5318271 complement(1455769..1457073) 1 NC_009620.1 PFAM: O-antigen polymerase; KEGG: sme:SMb20944 putative polysaccharide polymerase, similar to Wzy protein; O-antigen polymerase 1457073 5318271 Smed_4944 Sinorhizobium medicae WSM419 O-antigen polymerase YP_001313659.1 1455769 R 366394 CDS YP_001313660.1 150377064 5318272 complement(1457081..1458349) 1 NC_009620.1 PFAM: polysaccharide export protein; KEGG: sme:SMb20945 hypothetical outer membrane protein, similar to Wza, OMA family; polysaccharide export protein 1458349 5318272 Smed_4945 Sinorhizobium medicae WSM419 polysaccharide export protein YP_001313660.1 1457081 R 366394 CDS YP_001313661.1 150377065 5318157 complement(1458403..1459083) 1 NC_009620.1 PFAM: sugar transferase; KEGG: sme:SMb20946 galactosyltransferase protein; undecaprenyl-phosphate galactose phosphotransferase 1459083 5318157 Smed_4946 Sinorhizobium medicae WSM419 undecaprenyl-phosphate galactose phosphotransferase YP_001313661.1 1458403 R 366394 CDS YP_001313662.1 150377066 5318158 1459843..1460139 1 NC_009620.1 KEGG: sme:SMb20947 posttranscriptional regulator, repressor protein; posttranscriptional regulator, repressor protein 1460139 5318158 Smed_4947 Sinorhizobium medicae WSM419 posttranscriptional regulator, repressor protein YP_001313662.1 1459843 D 366394 CDS YP_001313663.1 150377067 5318159 1460367..1461395 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20948 glucosyltransferase protein; glycosyl transferase family protein 1461395 5318159 Smed_4948 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313663.1 1460367 D 366394 CDS YP_001313664.1 150377068 5318160 complement(1461386..1462336) 1 NC_009620.1 PFAM: ExoV-like protein; KEGG: sme:SMb20949 putative pyruvyltransferase protein; ExoV-like protein 1462336 5318160 Smed_4949 Sinorhizobium medicae WSM419 ExoV-like protein YP_001313664.1 1461386 R 366394 CDS YP_001313665.1 150377069 5318161 complement(1462448..1463407) 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb21690 glucosyltransferase protein; glycosyl transferase family protein 1463407 5318161 Smed_4950 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313665.1 1462448 R 366394 CDS YP_001313666.1 150377070 5318162 1463532..1465016 1 NC_009620.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: sme:SMb20950 putative transport protein, similar to Wzx; polysaccharide biosynthesis protein 1465016 5318162 Smed_4951 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001313666.1 1463532 D 366394 CDS YP_001313667.1 150377071 5318164 1465637..1465894 1 NC_009620.1 KEGG: sme:SMb20952 hypothetical protein; hypothetical protein 1465894 5318164 Smed_4953 Sinorhizobium medicae WSM419 hypothetical protein YP_001313667.1 1465637 D 366394 CDS YP_001313668.1 150377072 5318165 1466362..1467480 1 NC_009620.1 KEGG: sme:SMb20954 succinyltransferase protein; succinyltransferase 1467480 5318165 Smed_4954 Sinorhizobium medicae WSM419 succinyltransferase YP_001313668.1 1466362 D 366394 CDS YP_001313669.1 150377073 5318166 1467486..1468295 1 NC_009620.1 PFAM: glycoside hydrolase family 16; KEGG: sme:SMb20955 endo-beta-1,3-1,4-glycanase protein; glycoside hydrolase family protein 1468295 5318166 Smed_4955 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001313669.1 1467486 D 366394 CDS YP_001313670.1 150377074 5318167 1468388..1469596 1 NC_009620.1 KEGG: sme:SMb20956 putative glucosyltransferase protein; putative glucosyltransferase 1469596 5318167 Smed_4956 Sinorhizobium medicae WSM419 putative glucosyltransferase YP_001313670.1 1468388 D 366394 CDS YP_001313671.1 150377075 5318472 1469593..1470585 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20957 glucosyltransferase protein; glycosyl transferase family protein 1470585 5318472 Smed_4957 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313671.1 1469593 D 366394 CDS YP_001313672.1 150377076 5318473 1470585..1471514 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20958 glucosyltransferase protein; glycosyl transferase family protein 1471514 5318473 Smed_4958 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313672.1 1470585 D 366394 CDS YP_001313673.1 150377077 5318474 1471511..1472533 1 NC_009620.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20959 glucosyltransferase protein; glycosyl transferase family protein 1472533 5318474 Smed_4959 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313673.1 1471511 D 366394 CDS YP_001313674.1 150377078 5318475 1472538..1473443 1 NC_009620.1 PFAM: Nucleotidyl transferase; KEGG: sme:SMb20960 UDPglucose pyrophosphorylase protein; nucleotidyl transferase 1473443 5318475 Smed_4960 Sinorhizobium medicae WSM419 nucleotidyl transferase YP_001313674.1 1472538 D 366394 CDS YP_001313675.1 150377079 5318476 1473587..1475953 1 NC_009620.1 TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMb20961 protein tyrosine kinase, MPA1 family, involved in succinoglycan chain-length determination; exopolysaccharide transport protein family protein 1475953 5318476 Smed_4961 Sinorhizobium medicae WSM419 exopolysaccharide transport protein family protein YP_001313675.1 1473587 D 366394 CDS YP_001313676.1 150377080 5318477 complement(1476012..1476812) 1 NC_009620.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: sme:SMb20962 probable phoshomethylpyrimidine kinase protein; phosphomethylpyrimidine kinase 1476812 5318477 Smed_4962 Sinorhizobium medicae WSM419 phosphomethylpyrimidine kinase YP_001313676.1 1476012 R 366394 CDS YP_001313677.1 150377081 5318478 1477253..1477912 1 NC_009620.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMb20964 putative anti-oxidant protein, AhpCTSA family; peroxidase 1477912 5318478 Smed_4963 Sinorhizobium medicae WSM419 peroxidase YP_001313677.1 1477253 D 366394 CDS YP_001313678.1 150377082 5318479 complement(1478003..1479010) 1 NC_009620.1 PFAM: beta-lactamase; KEGG: sme:SMb20965 putative exported enzyme, similar to 6-aminohexanoate-dimer hydrolase protein; beta-lactamase 1479010 5318479 Smed_4964 Sinorhizobium medicae WSM419 beta-lactamase YP_001313678.1 1478003 R 366394 CDS YP_001313679.1 150377083 5318480 complement(1479172..1479723) 1 NC_009620.1 PFAM: MaoC domain protein dehydratase; KEGG: sme:SMb20978 hypothetical protein; dehydratase 1479723 5318480 Smed_4965 Sinorhizobium medicae WSM419 dehydratase YP_001313679.1 1479172 R 366394 CDS YP_001313680.1 150377084 5318481 complement(1479807..1481120) 1 NC_009620.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMb20979 putative large C4-dicarboxylate uptake permease protein, DedA family protein; TRAP dicarboxylate transporter subunit DctM 1481120 5318481 Smed_4966 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001313680.1 1479807 R 366394 CDS YP_001313681.1 150377085 5318030 complement(1481117..1481668) 1 NC_009620.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMb20980 putative small C4-dicarboxylate uptake permease protein; tripartite ATP-independent periplasmic transporter DctQ 1481668 5318030 Smed_4967 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001313681.1 1481117 R 366394 CDS YP_001313682.1 150377086 5318031 complement(1481710..1482687) 1 NC_009620.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMb20981 putative C4-dicarboxylate transporter periplasmic solute-binding protein precursor; TRAP dicarboxylate transporter subunit DctP 1482687 5318031 Smed_4968 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001313682.1 1481710 R 366394 CDS YP_001313683.1 150377087 5318032 complement(1483388..1484665) 1 NC_009620.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PE00430 probable mandelate racemase protein; mandelate racemase/muconate lactonizing protein 1484665 5318032 Smed_4969 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001313683.1 1483388 R 366394 CDS YP_001313684.1 150377088 5318033 complement(1484747..1485592) 1 NC_009620.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sme:SMb21112 putative bifunctional enzyme 2-hydroxyhepta-2,4-diene-1,7-dioatesomerase 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase protein; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 1485592 5318033 Smed_4970 Sinorhizobium medicae WSM419 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001313684.1 1484747 R 366394 CDS YP_001313685.1 150377089 5318034 complement(1485615..1486349) 1 NC_009620.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb21111 putative oxidoreductase, red superfamily protein; short-chain dehydrogenase/reductase SDR 1486349 5318034 Smed_4971 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313685.1 1485615 R 366394 CDS YP_001313686.1 150377090 5318035 complement(1486346..1486807) 1 NC_009620.1 PFAM: MaoC domain protein dehydratase; KEGG: sme:SMb21110 putative MaoC-like (monoamine oxidase-like) protein, similar to NodN; dehydratase 1486807 5318035 Smed_4972 Sinorhizobium medicae WSM419 dehydratase YP_001313686.1 1486346 R 366394 CDS YP_001313687.1 150377091 5318036 complement(1486810..1487892) 1 NC_009620.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMb21109 putative oxidoreductase protein; oxidoreductase domain-containing protein 1487892 5318036 Smed_4973 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001313687.1 1486810 R 366394 CDS YP_001313688.1 150377092 5318037 complement(1487885..1488214) 1 NC_009620.1 PFAM: protein of unknown function DUF718; KEGG: sme:SMb21108 conserved hypothetical protein, similar to Y03002; hypothetical protein 1488214 5318037 Smed_4974 Sinorhizobium medicae WSM419 hypothetical protein YP_001313688.1 1487885 R 366394 CDS YP_001313689.1 150377093 5318038 complement(1488227..1489339) 1 NC_009620.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMb21107 putative mandelate racemase or evolutionary related enzyme of the mandelate racemase muconate lactonizing enzyme family protein; mandelate racemase/muconate lactonizing protein 1489339 5318038 Smed_4975 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001313689.1 1488227 R 366394 CDS YP_001313690.1 150377094 5318039 complement(1489341..1490438) 1 NC_009620.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb21106 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 1490438 5318039 Smed_4976 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313690.1 1489341 R 366394 CDS YP_001313691.1 150377095 5318040 complement(1490445..1491311) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21105 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1491311 5318040 Smed_4977 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313691.1 1490445 R 366394 CDS YP_001313692.1 150377096 5318791 complement(1491311..1492207) 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21104 putative sugar uptake ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1492207 5318791 Smed_4978 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313692.1 1491311 R 366394 CDS YP_001313693.1 150377097 5318792 complement(1492278..1493597) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb21103 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1493597 5318792 Smed_4979 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313693.1 1492278 R 366394 CDS YP_001313694.1 150377098 5318793 1493765..1494547 1 NC_009620.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb21102 putative transcriptional regulator protein; regulatory protein IclR 1494547 5318793 Smed_4980 Sinorhizobium medicae WSM419 regulatory protein IclR YP_001313694.1 1493765 D 366394 CDS YP_001313695.1 150377099 5318794 1494610..1495446 1 NC_009620.1 PFAM: amidohydrolase 2; KEGG: sme:SMb21101 conserved hypothetical membrane-anchored protein; amidohydrolase 2 1495446 5318794 Smed_4981 Sinorhizobium medicae WSM419 amidohydrolase 2 YP_001313695.1 1494610 D 366394 CDS YP_001313696.1 150377100 5318795 complement(1495538..1496416) 1 NC_009620.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMb21100 putative saccharide deacetylase, slightly similar to NodB protein; polysaccharide deacetylase 1496416 5318795 Smed_4982 Sinorhizobium medicae WSM419 polysaccharide deacetylase YP_001313696.1 1495538 R 366394 CDS YP_001313697.1 150377101 5318796 complement(1496427..1497887) 1 NC_009620.1 PFAM: MmgE/PrpD family protein; KEGG: bam:Bamb_6463 MmgE/PrpD family protein; MmgE/PrpD family protein 1497887 5318796 Smed_4983 Sinorhizobium medicae WSM419 MmgE/PrpD family protein YP_001313697.1 1496427 R 366394 CDS YP_001313698.1 150377102 5318797 complement(1497900..1498730) 1 NC_009620.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMb21097 putative amino acid uptake ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1498730 5318797 Smed_4984 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313698.1 1497900 R 366394 CDS YP_001313699.1 150377103 5318798 complement(1498793..1499563) 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb21096 putative amino acid transporter ABC transporter ATP-binding protein; ABC transporter-like protein 1499563 5318798 Smed_4985 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313699.1 1498793 R 366394 CDS YP_001313700.1 150377104 5318799 complement(1499572..1500444) 1 NC_009620.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21095 putative amino acid uptake ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 1500444 5318799 Smed_4986 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001313700.1 1499572 R 366394 CDS YP_001313701.1 150377105 5318800 complement(1500441..1501907) 1 NC_009620.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1501907 5318800 Smed_4987 Sinorhizobium medicae WSM419 argininosuccinate lyase YP_001313701.1 1500441 R 366394 CDS YP_001313702.1 150377106 5318801 1502162..1503064 1 NC_009620.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb21093 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 1503064 5318801 Smed_4988 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313702.1 1502162 D 366394 CDS YP_001313703.1 150377107 5318710 complement(1503226..1503696) 1 NC_009620.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMb21092 putative acetyltransferase protein; N-acetyltransferase GCN5 1503696 5318710 Smed_4989 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001313703.1 1503226 R 366394 CDS YP_001313704.1 150377108 5318711 complement(1503718..1504719) 1 NC_009620.1 PFAM: glycoside hydrolase family 25; KEGG: sme:SMb21091 putative cell-wall lytic enzyme, similar to muramidase protein; glycoside hydrolase family protein 1504719 5318711 Smed_4990 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001313704.1 1503718 R 366394 CDS YP_001313705.1 150377109 5318712 complement(1504933..1506063) 1 NC_009620.1 KEGG: sme:SMb21090 conserved hypothetical membrane-anchored protein; hypothetical protein 1506063 5318712 Smed_4991 Sinorhizobium medicae WSM419 hypothetical protein YP_001313705.1 1504933 R 366394 CDS YP_001313706.1 150377110 5318713 complement(1506060..1507220) 1 NC_009620.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mlo:mll7158 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 1507220 5318713 Smed_4992 Sinorhizobium medicae WSM419 L-carnitine dehydratase/bile acid-inducible protein F YP_001313706.1 1506060 R 366394 CDS YP_001313707.1 150377111 5318714 1507504..1508805 1 NC_009620.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: sme:SMb20834 probable surface saccharide synthesis protein, possibly involved in chain-length determination; capsule polysaccharide biosynthesis protein 1508805 5318714 Smed_4993 Sinorhizobium medicae WSM419 capsule polysaccharide biosynthesis protein YP_001313707.1 1507504 D 366394 CDS YP_001313708.1 150377112 5318715 1508811..1509581 1 NC_009620.1 PFAM: ABC-2 type transporter; KEGG: sme:SMb20833 putative cell surface polysaccharide export ABC-2 transporter permease protein, close relative of Y20822wzm2; ABC-2 type transporter 1509581 5318715 Smed_4994 Sinorhizobium medicae WSM419 ABC-2 type transporter YP_001313708.1 1508811 D 366394 CDS YP_001313709.1 150377113 5318716 1509578..1510237 1 NC_009620.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20832 putative cell surface polysaccharide export ABC-2 transporter ATP-binding protein; ABC transporter-like protein 1510237 5318716 Smed_4995 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313709.1 1509578 D 366394 CDS YP_001313710.1 150377114 5318717 1510238..1511569 1 NC_009620.1 KEGG: sme:SMb20831 putative polysaccharide export-assoiated protein; capsule polysaccharide export protein-like protein 1511569 5318717 Smed_4996 Sinorhizobium medicae WSM419 capsule polysaccharide export protein-like protein YP_001313710.1 1510238 D 366394 CDS YP_001313711.1 150377115 5318718 complement(1511623..1512624) 1 NC_009620.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: sme:SMc02268 putative capsule expression protein; KpsF/GutQ family protein 1512624 5318718 Smed_4997 Sinorhizobium medicae WSM419 KpsF/GutQ family protein YP_001313711.1 1511623 R 366394 CDS YP_001313712.1 150377116 5318719 1513014..1514006 1 NC_009620.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc02252 probable UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 1514006 5318719 Smed_4998 Sinorhizobium medicae WSM419 UDP-glucose 4-epimerase YP_001313712.1 1513014 D 366394 CDS YP_001313713.1 150377117 5318720 1514089..1515114 1 NC_009620.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: sme:SMb20823 putative cell surface saccharide synthesis protein, possibly involved in chain-length determination, truncated N-terminus; capsule polysaccharide biosynthesis protein 1515114 5318720 Smed_4999 Sinorhizobium medicae WSM419 capsule polysaccharide biosynthesis protein YP_001313713.1 1514089 D 366394 CDS YP_001313714.1 150377118 5318649 1515366..1517090 1 NC_009620.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMb20829 putative secreted calcium-binding protein; Hemolysin-type calcium-binding protein 1517090 5318649 Smed_5000 Sinorhizobium medicae WSM419 Hemolysin-type calcium-binding protein YP_001313714.1 1515366 D 366394 CDS YP_001313715.1 150377119 5318650 complement(1517160..1517837) 1 NC_009620.1 hypothetical protein 1517837 5318650 Smed_5001 Sinorhizobium medicae WSM419 hypothetical protein YP_001313715.1 1517160 R 366394 CDS YP_001313716.1 150377120 5318651 1518056..1520416 1 NC_009620.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: cjj:CJJ81176_1436 putative glycosyl transferase; hypothetical protein 1520416 5318651 Smed_5002 Sinorhizobium medicae WSM419 hypothetical protein YP_001313716.1 1518056 D 366394 CDS YP_001313717.1 150377121 5318652 complement(1520763..1521545) 1 NC_009620.1 PFAM: ABC-2 type transporter; KEGG: sme:SMb20822 putative cell surface polysaccharide export ABC-2 transporter permease protein, close relative to wzm1Y20833; ABC-2 type transporter 1521545 5318652 Smed_5003 Sinorhizobium medicae WSM419 ABC-2 type transporter YP_001313717.1 1520763 R 366394 CDS YP_001313718.1 150377122 5318653 complement(1521863..1522663) 1 NC_009620.1 PFAM: Ketopantoate hydroxymethyltransferase; KEGG: sme:SMb20821 putative ATPGTP-binding hydroxymethyltransferase protein; ketopantoate hydroxymethyltransferase 1522663 5318653 Smed_5004 Sinorhizobium medicae WSM419 ketopantoate hydroxymethyltransferase YP_001313718.1 1521863 R 366394 CDS YP_001313719.1 150377123 5318654 complement(1522703..1523929) 1 NC_009620.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMb20820 putative ferredoxin reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1523929 5318654 Smed_5005 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001313719.1 1522703 R 366394 CDS YP_001313720.1 150377124 5318655 complement(1524279..1524596) 1 NC_009620.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMb20819 putative ferredoxin of the Rieseke type protein; Rieske (2Fe-2S) domain-containing protein 1524596 5318655 Smed_5006 Sinorhizobium medicae WSM419 Rieske (2Fe-2S) domain-containing protein YP_001313720.1 1524279 R 366394 CDS YP_001313721.1 150377125 5318656 complement(1524637..1525728) 1 NC_009620.1 PFAM: fatty acid desaturase; KEGG: sme:SMb20818 putative hydrocarbon oxygenase protein; fatty acid desaturase 1525728 5318656 Smed_5007 Sinorhizobium medicae WSM419 fatty acid desaturase YP_001313721.1 1524637 R 366394 CDS YP_001313722.1 150377126 5318657 1525936..1526967 1 NC_009620.1 PFAM: regulatory protein LacI; KEGG: sme:SMb20817 putative transcriptional regulator, LacI family protein; regulatory protein LacI 1526967 5318657 Smed_5008 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001313722.1 1525936 D 366394 CDS YP_001313723.1 150377127 5318658 1527046..1530087 1 NC_009620.1 PFAM: AsmA family protein; KEGG: sme:SMb20815 putative protein, similar to protein involved in assembly of outer membrane proteins; AsmA family protein 1530087 5318658 Smed_5009 Sinorhizobium medicae WSM419 AsmA family protein YP_001313723.1 1527046 D 366394 CDS YP_001313724.1 150377128 5318659 complement(1530138..1530878) 1 NC_009620.1 KEGG: sme:SMb20814 hypothetical protein; hypothetical protein 1530878 5318659 Smed_5010 Sinorhizobium medicae WSM419 hypothetical protein YP_001313724.1 1530138 R 366394 CDS YP_001313725.1 150377129 5318750 complement(1531199..1533004) 1 NC_009620.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20813 putative lipid A + LPS core exporting ABC transporter protein, consisting of ATP-binding and permease domains; ABC transporter-like protein 1533004 5318750 Smed_5011 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313725.1 1531199 R 366394 CDS YP_001313726.1 150377130 5318751 1533461..1534639 1 NC_009620.1 KEGG: sme:SMb20812 conserved hypothetical protein, possibly membrane-anchored; hypothetical protein 1534639 5318751 Smed_5012 Sinorhizobium medicae WSM419 hypothetical protein YP_001313726.1 1533461 D 366394 CDS YP_001313727.1 150377131 5318752 complement(1534694..1534990) 1 NC_009620.1 KEGG: sme:SMb20811 hypothetical protein; hypothetical protein 1534990 5318752 Smed_5013 Sinorhizobium medicae WSM419 hypothetical protein YP_001313727.1 1534694 R 366394 CDS YP_001313728.1 150377132 5318753 complement(1535151..1537238) 1 NC_009620.1 PFAM: acyltransferase 3; KEGG: sme:SMb20810 putative membrane-located cell surface saccharide saccharide acetylase protein; acyltransferase 3 1537238 5318753 Smed_5014 Sinorhizobium medicae WSM419 acyltransferase 3 YP_001313728.1 1535151 R 366394 CDS YP_001313729.1 150377133 5318754 complement(1537297..1538286) 1 NC_009620.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: sme:SMb20809 putative protein involved in assembly, operation or regulation of an export machinery for a cell surface saccharide; KpsF/GutQ family protein 1538286 5318754 Smed_5015 Sinorhizobium medicae WSM419 KpsF/GutQ family protein YP_001313729.1 1537297 R 366394 CDS YP_001313730.1 150377134 5318755 1538563..1539300 1 NC_009620.1 KEGG: sme:SMb20808 putative membrane-anchored protein; putative membrane-anchored protein 1539300 5318755 Smed_5016 Sinorhizobium medicae WSM419 putative membrane-anchored protein YP_001313730.1 1538563 D 366394 CDS YP_001313731.1 150377135 5318756 complement(1539276..1540769) 1 NC_009620.1 PFAM: glycosyl transferase family 39; KEGG: sme:SMb20807 hypothetical protein; glycosyl transferase family protein 1540769 5318756 Smed_5017 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001313731.1 1539276 R 366394 CDS YP_001313732.1 150377136 5318757 1541046..1541735 1 NC_009620.1 KEGG: sme:SMb20806 hypothetical protein; hypothetical protein 1541735 5318757 Smed_5018 Sinorhizobium medicae WSM419 hypothetical protein YP_001313732.1 1541046 D 366394 CDS YP_001313733.1 150377137 5318758 complement(1541863..1542768) 1 NC_009620.1 KEGG: sme:SMb20805 putative glycosyltransferase protein; putative glycosyltransferase 1542768 5318758 Smed_5019 Sinorhizobium medicae WSM419 putative glycosyltransferase YP_001313733.1 1541863 R 366394 CDS YP_001313734.1 150377138 5318759 complement(1542827..1543558) 1 NC_009620.1 KEGG: sme:SMb20804 putative membrane-anchored protein; putative membrane-anchored protein 1543558 5318759 Smed_5020 Sinorhizobium medicae WSM419 putative membrane-anchored protein YP_001313734.1 1542827 R 366394 CDS YP_001313735.1 150377139 5318760 complement(1543601..1544431) 1 NC_009620.1 KEGG: sme:SMb20803 probable 3-deoxy-manno-octulosonate cytidylyltransferase (CMP KDO transferase) protein; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1544431 5318760 Smed_5021 Sinorhizobium medicae WSM419 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_001313735.1 1543601 R 366394 CDS YP_001313736.1 150377140 5318770 1544662..1545576 1 NC_009620.1 PFAM: protein of unknown function DUF23; KEGG: sme:SMb20563 hypothetical protein; hypothetical protein 1545576 5318770 Smed_5022 Sinorhizobium medicae WSM419 hypothetical protein YP_001313736.1 1544662 D 366394 CDS YP_001313737.1 150377141 5318771 1545632..1546603 1 NC_009620.1 KEGG: sme:SMb20562 hypothetical protein; hypothetical protein 1546603 5318771 Smed_5023 Sinorhizobium medicae WSM419 hypothetical protein YP_001313737.1 1545632 D 366394 CDS YP_001313738.1 150377142 5318772 complement(1546626..1547471) 1 NC_009620.1 KEGG: sme:SMb20043 hypothetical protein; hypothetical protein 1547471 5318772 Smed_5024 Sinorhizobium medicae WSM419 hypothetical protein YP_001313738.1 1546626 R 366394 CDS YP_001313739.1 150377143 5318773 1548029..1548250 1 NC_009620.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sme:SMb20560 hypothetical protein; heavy metal transport/detoxification protein 1548250 5318773 Smed_5025 Sinorhizobium medicae WSM419 heavy metal transport/detoxification protein YP_001313739.1 1548029 D 366394 CDS YP_001313740.1 150377144 5318774 1548361..1548735 1 NC_009620.1 KEGG: sme:SMa1033 hypothetical protein; hypothetical protein 1548735 5318774 Smed_5026 Sinorhizobium medicae WSM419 hypothetical protein YP_001313740.1 1548361 D 366394 CDS YP_001313741.1 150377145 5318775 1548828..1549055 1 NC_009620.1 KEGG: sme:SMa1036 hypothetical protein; hypothetical protein 1549055 5318775 Smed_5027 Sinorhizobium medicae WSM419 hypothetical protein YP_001313741.1 1548828 D 366394 CDS YP_001313742.1 150377146 5318776 1549052..1550515 1 NC_009620.1 KEGG: sme:SMa1037 hypothetical protein; hypothetical protein 1550515 5318776 Smed_5028 Sinorhizobium medicae WSM419 hypothetical protein YP_001313742.1 1549052 D 366394 CDS YP_001313743.1 150377147 5318777 1550530..1551879 1 NC_009620.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sme:SMa1038 putative copper-containing oxidase; multicopper oxidase type 3 1551879 5318777 Smed_5029 Sinorhizobium medicae WSM419 multicopper oxidase type 3 YP_001313743.1 1550530 D 366394 CDS YP_001313744.1 150377148 5318778 1551919..1552398 1 NC_009620.1 PFAM: blue (type 1) copper domain protein; KEGG: sme:SMa1041 putative copper oxidase, possibly exported; blue (type1) copper domain-containing protein 1552398 5318778 Smed_5030 Sinorhizobium medicae WSM419 blue (type1) copper domain-containing protein YP_001313744.1 1551919 D 366394 CDS YP_001313745.1 150377149 5318779 1552418..1552702 1 NC_009620.1 KEGG: sme:SMa1043 hypothetical protein; hypothetical protein 1552702 5318779 Smed_5031 Sinorhizobium medicae WSM419 hypothetical protein YP_001313745.1 1552418 D 366394 CDS YP_001313746.1 150377150 5318780 complement(1553015..1554178) 1 NC_009620.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMb21229 putative calcium-binding exported protein; Hemolysin-type calcium-binding protein 1554178 5318780 Smed_5032 Sinorhizobium medicae WSM419 Hemolysin-type calcium-binding protein YP_001313746.1 1553015 R 366394 CDS YP_001313747.1 150377151 5319083 complement(1555250..1555459) 1 NC_009620.1 KEGG: sme:SMb21035 hypothetical protein; XRE family transcriptional regulator 1555459 5319083 Smed_5034 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313747.1 1555250 R 366394 CDS YP_001313748.1 150377152 5319084 1555624..1556202 1 NC_009620.1 KEGG: sme:SMb21036 hypothetical protein; hypothetical protein 1556202 5319084 Smed_5035 Sinorhizobium medicae WSM419 hypothetical protein YP_001313748.1 1555624 D 366394 CDS YP_001313749.1 150377153 5319085 complement(1556260..1556478) 1 NC_009620.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3368 transcriptional regulator, XRE family; XRE family transcriptional regulator 1556478 5319085 Smed_5036 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001313749.1 1556260 R 366394 CDS YP_001313750.1 150377154 5319086 1556637..1558241 1 NC_009620.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb21037 putative oligopeptidemurein peptide ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 1558241 5319086 Smed_5037 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313750.1 1556637 D 366394 CDS YP_001313751.1 150377155 5319087 1558248..1559225 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21038 putative oligopeptidemurein peptide ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 1559225 5319087 Smed_5038 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001313751.1 1558248 D 366394 CDS YP_001313752.1 150377156 5319088 1559239..1560114 1 NC_009620.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21039 putative oligopeptidemurein peptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 1560114 5319088 Smed_5039 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313752.1 1559239 D 366394 CDS YP_001313753.1 150377157 5319089 1560111..1561784 1 NC_009620.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb21040 putative oligopeptidemurein peptide ABC transporter ATP-binding protein; ABC transporter-like protein 1561784 5319089 Smed_5040 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313753.1 1560111 D 366394 CDS YP_001313754.1 150377158 5319090 1561872..1563110 1 NC_009620.1 possibly related to processing of cell wall amino acids; KEGG: sme:SMb21041 conserved putative protein, possibly related to processing of cell wall amino acids; hypothetical protein 1563110 5319090 Smed_5041 Sinorhizobium medicae WSM419 hypothetical protein YP_001313754.1 1561872 D 366394 CDS YP_001313755.1 150377159 5319091 1563228..1564472 1 NC_009620.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1564472 5319091 Smed_5042 Sinorhizobium medicae WSM419 peptidase T YP_001313755.1 1563228 D 366394 CDS YP_001313756.1 150377160 5319092 complement(1564658..1564957) 1 NC_009620.1 PFAM: protein of unknown function DUF736; KEGG: nwi:Nwi_0840 protein of unknown function DUF736; hypothetical protein 1564957 5319092 Smed_5043 Sinorhizobium medicae WSM419 hypothetical protein YP_001313756.1 1564658 R 366394 CDS YP_001313757.1 150377161 5317919 complement(1566541..1566789) 1 NC_009620.1 hypothetical protein 1566789 5317919 Smed_5045 Sinorhizobium medicae WSM419 hypothetical protein YP_001313757.1 1566541 R 366394 CDS YP_001313758.1 150377162 5317920 1567167..1567466 1 NC_009620.1 PFAM: protein of unknown function DUF736; KEGG: nwi:Nwi_0840 protein of unknown function DUF736; hypothetical protein 1567466 5317920 Smed_5046 Sinorhizobium medicae WSM419 hypothetical protein YP_001313758.1 1567167 D 366394 CDS YP_001313759.1 150377163 5317921 1567604..1568056 1 NC_009620.1 KEGG: rle:pRL80113 hypothetical protein; hypothetical protein 1568056 5317921 Smed_5047 Sinorhizobium medicae WSM419 hypothetical protein YP_001313759.1 1567604 D 366394 CDS YP_001313760.1 150377164 5317922 complement(1568391..1569914) 1 NC_009620.1 PFAM: Integrase catalytic region; KEGG: sme:SMc03283 putative transposase for insertion sequence ISRM18; integrase catalytic region 1569914 5317922 Smed_5048 Sinorhizobium medicae WSM419 integrase catalytic region YP_001313760.1 1568391 R 366394 CDS YP_001313761.1 150377165 5317923 1570053..1570421 1 NC_009620.1 hypothetical protein 1570421 5317923 Smed_5049 Sinorhizobium medicae WSM419 hypothetical protein YP_001313761.1 1570053 D 366394 CDS YP_001313762.1 150377166 5317924 complement(1570397..1570591) 1 NC_009620.1 PFAM: Conjugal transfer TraD family protein; KEGG: rle:pRL70084 putative conjugal transfer protein; conjugal transfer TraD family protein 1570591 5317924 Smed_5050 Sinorhizobium medicae WSM419 conjugal transfer TraD family protein YP_001313762.1 1570397 R 366394 CDS YP_001313763.1 150377167 5317925 complement(1570596..1570892) 1 NC_009620.1 PFAM: TraC family protein; KEGG: ret:RHE_PA00158 conjugal transfer protein C; conjugal transfer protein TraC 1570892 5317925 Smed_5051 Sinorhizobium medicae WSM419 conjugal transfer protein TraC YP_001313763.1 1570596 R 366394 CDS YP_001313764.1 150377169 5320632 join(21..365,365..967) 1 NC_009621.1 KEGG: nha:Nham_4172 ISSpo6, transposase orf A; transposase 967 5320632 Smed_5052 Sinorhizobium medicae WSM419 transposase YP_001313764.1 21 D 366394 CDS YP_001313765.1 150377170 5319355 complement(1039..1794) 1 NC_009621.1 TIGRFAM: Arsenate resistance ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: sal:Sala_2537 NADPH-dependent FMN reductase; arsenate resistance ArsH 1794 5319355 Smed_5053 Sinorhizobium medicae WSM419 arsenate resistance ArsH YP_001313765.1 1039 R 366394 CDS YP_001313766.1 150377171 5319356 complement(1807..2886) 1 NC_009621.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: sal:Sala_2405 arsenical-resistance protein; arsenical-resistance protein 2886 5319356 Smed_5054 Sinorhizobium medicae WSM419 arsenical-resistance protein YP_001313766.1 1807 R 366394 CDS YP_001313767.1 150377172 5319357 complement(3071..3502) 1 NC_009621.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rpa:RPA2257 arsenate reductase pump modifier; arsenate reductase 3502 5319357 Smed_5055 Sinorhizobium medicae WSM419 arsenate reductase YP_001313767.1 3071 R 366394 CDS YP_001313768.1 150377173 5319358 complement(3499..4026) 1 NC_009621.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_0618 protein tyrosine phosphatase; protein tyrosine phosphatase 4026 5319358 Smed_5056 Sinorhizobium medicae WSM419 protein tyrosine phosphatase YP_001313768.1 3499 R 366394 CDS YP_001313769.1 150377174 5319359 complement(4026..4376) 1 NC_009621.1 SMART: regulatory protein ArsR; KEGG: mes:Meso_4198 transcriptional regulator, ArsR family; regulatory protein ArsR 4376 5319359 Smed_5057 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001313769.1 4026 R 366394 CDS YP_001313770.1 150377175 5319360 complement(4554..5201) 1 NC_009621.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: sme:SMa1326 hypothetical protein; deaminase-reductase domain-containing protein 5201 5319360 Smed_5058 Sinorhizobium medicae WSM419 deaminase-reductase domain-containing protein YP_001313770.1 4554 R 366394 CDS YP_001313771.1 150377176 5319361 complement(5250..6104) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMa1327 putative hydrolase; alpha/beta hydrolase fold protein 6104 5319361 Smed_5059 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001313771.1 5250 R 366394 CDS YP_001313772.1 150377177 5319362 6553..7743 1 NC_009621.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMc03108 hypothetical calcium-binding protein; hemolysin-type calcium-binding protein 7743 5319362 Smed_5060 Sinorhizobium medicae WSM419 hemolysin-type calcium-binding protein YP_001313772.1 6553 D 366394 CDS YP_001313773.1 150377178 5319363 complement(7962..8720) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa1367 putative dehdyrogenase; short-chain dehydrogenase/reductase SDR 8720 5319363 Smed_5061 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313773.1 7962 R 366394 CDS YP_001313774.1 150377179 5319364 complement(8728..9453) 1 NC_009621.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMa1368 hypothetical protein; hypothetical protein 9453 5319364 Smed_5062 Sinorhizobium medicae WSM419 hypothetical protein YP_001313774.1 8728 R 366394 CDS YP_001313775.1 150377180 5319365 complement(9453..10436) 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1370 probable ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 10436 5319365 Smed_5063 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001313775.1 9453 R 366394 CDS YP_001313776.1 150377181 5319366 complement(10433..11419) 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1371 probable ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 11419 5319366 Smed_5064 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001313776.1 10433 R 366394 CDS YP_001313777.1 150377182 5319367 complement(11416..12384) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1374 probable ABC transporter permease; binding-protein-dependent transport systems inner membrane component 12384 5319367 Smed_5065 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313777.1 11416 R 366394 CDS YP_001313778.1 150377183 5319368 complement(12384..13304) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1373 probable ABC transporter permease; binding-protein-dependent transport systems inner membrane component 13304 5319368 Smed_5066 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313778.1 12384 R 366394 CDS YP_001313779.1 150377184 5319369 complement(13381..14868) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa1375 probable ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 14868 5319369 Smed_5067 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313779.1 13381 R 366394 CDS YP_001313780.1 150377185 5319370 complement(14889..16310) 1 NC_009621.1 PFAM: Amidase; KEGG: sme:SMa1377 putative amidase; amidase 16310 5319370 Smed_5068 Sinorhizobium medicae WSM419 amidase YP_001313780.1 14889 R 366394 CDS YP_001313781.1 150377186 5319371 complement(16297..16485) 1 NC_009621.1 hypothetical protein 16485 5319371 Smed_5069 Sinorhizobium medicae WSM419 hypothetical protein YP_001313781.1 16297 R 366394 CDS YP_001313782.1 150377187 5319372 complement(16478..17965) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa1379 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 17965 5319372 Smed_5070 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313782.1 16478 R 366394 CDS YP_001313783.1 150377188 5319373 complement(18021..19382) 1 NC_009621.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMa1381 hypothetical protein; BFD/(2Fe-2S)-binding domain-containing protein 19382 5319373 Smed_5071 Sinorhizobium medicae WSM419 BFD/(2Fe-2S)-binding domain-containing protein YP_001313783.1 18021 R 366394 CDS YP_001313784.1 150377189 5319374 complement(19375..19632) 1 NC_009621.1 PFAM: ferredoxin; KEGG: sco:SCO6290 hypothetical protein; ferredoxin 19632 5319374 Smed_5072 Sinorhizobium medicae WSM419 ferredoxin YP_001313784.1 19375 R 366394 CDS YP_001313785.1 150377190 5319375 complement(19629..20912) 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa1386 putative oxidoreductase; FAD dependent oxidoreductase 20912 5319375 Smed_5073 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313785.1 19629 R 366394 CDS YP_001313786.1 150377191 5319376 20991..21875 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1387 putative LysR-type transcriptional regulator; LysR family transcriptional regulator 21875 5319376 Smed_5074 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313786.1 20991 D 366394 CDS YP_001313787.1 150377192 5319377 complement(21887..22372) 1 NC_009621.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator; AsnC family transcriptional regulator 22372 5319377 Smed_5075 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001313787.1 21887 R 366394 CDS YP_001313788.1 150377193 5319378 22476..23675 1 NC_009621.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 23675 5319378 Smed_5076 Sinorhizobium medicae WSM419 diaminopropionate ammonia-lyase YP_001313788.1 22476 D 366394 CDS YP_001313789.1 150377194 5319379 complement(23806..25455) 1 NC_009621.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1434 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 25455 5319379 Smed_5077 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313789.1 23806 R 366394 CDS YP_001313790.1 150377195 5319380 complement(25452..26369) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1435 probable ABC transporter permease; binding-protein-dependent transport systems inner membrane component 26369 5319380 Smed_5078 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313790.1 25452 R 366394 CDS YP_001313791.1 150377196 5319381 complement(26382..27299) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1437 probable ABC transporter permease; binding-protein-dependent transport systems inner membrane component 27299 5319381 Smed_5079 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313791.1 26382 R 366394 CDS YP_001313792.1 150377197 5319382 complement(27372..28880) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa1438 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 28880 5319382 Smed_5080 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313792.1 27372 R 366394 CDS YP_001313793.1 150377198 5319383 complement(28956..29861) 1 NC_009621.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 29861 5319383 Smed_5081 Sinorhizobium medicae WSM419 5-dehydro-4-deoxyglucarate dehydratase YP_001313793.1 28956 R 366394 CDS YP_001313794.1 150377199 5319384 complement(29925..30677) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa1442 putative GntR-family transcription factor; GntR domain-containing protein 30677 5319384 Smed_5082 Sinorhizobium medicae WSM419 GntR domain-containing protein YP_001313794.1 29925 R 366394 CDS YP_001313795.1 150377200 5319385 complement(30856..32169) 1 NC_009621.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMa1447 putative transmembrane transport protein; major facilitator transporter 32169 5319385 Smed_5083 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313795.1 30856 R 366394 CDS YP_001313796.1 150377201 5319387 complement(33928..34677) 1 NC_009621.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_3677 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 34677 5319387 Smed_5085 Sinorhizobium medicae WSM419 enoyl-CoA hydratase/isomerase YP_001313796.1 33928 R 366394 CDS YP_001313797.1 150377202 5319388 complement(34690..36327) 1 NC_009621.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: mpt:Mpe_B0541 methylmalonyl-CoA mutase; methylmalonyl-CoA mutase, large subunit 36327 5319388 Smed_5086 Sinorhizobium medicae WSM419 methylmalonyl-CoA mutase, large subunit YP_001313797.1 34690 R 366394 CDS YP_001313798.1 150377203 5319389 complement(36377..37378) 1 NC_009621.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; KEGG: mpt:Mpe_B0540 putative transport system kinase; LAO/AO transport system ATPase 37378 5319389 Smed_5087 Sinorhizobium medicae WSM419 LAO/AO transport system ATPase YP_001313798.1 36377 R 366394 CDS YP_001313799.1 150377204 5319390 complement(37375..37836) 1 NC_009621.1 PFAM: cobalamin B12-binding domain protein; KEGG: mpt:Mpe_B0538 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding); cobalamin B12-binding domain-containing protein 37836 5319390 Smed_5088 Sinorhizobium medicae WSM419 cobalamin B12-binding domain-containing protein YP_001313799.1 37375 R 366394 CDS YP_001313800.1 150377205 5319391 complement(37849..39204) 1 NC_009621.1 PFAM: aminotransferase class-III; KEGG: atc:AGR_pAT_435 hypothetical protein; class III aminotransferase 39204 5319391 Smed_5089 Sinorhizobium medicae WSM419 class III aminotransferase YP_001313800.1 37849 R 366394 CDS YP_001313801.1 150377206 5319392 39301..40158 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_pAT_436 hypothetical protein; LysR family transcriptional regulator 40158 5319392 Smed_5090 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313801.1 39301 D 366394 CDS YP_001313802.1 150377207 5319393 complement(40311..41120) 1 NC_009621.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: atc:AGR_L_644 PcaR protein; beta-ketoadipate pathway transcription regulator 41120 5319393 Smed_5091 Sinorhizobium medicae WSM419 beta-ketoadipate pathway transcription regulator YP_001313802.1 40311 R 366394 CDS YP_001313803.1 150377208 5319394 41190..41897 1 NC_009621.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: atc:AGR_L_1055GM 3-oxoacid CoA-transferase subunit A; 3-oxoacid CoA-transferase, A subunit 41897 5319394 Smed_5092 Sinorhizobium medicae WSM419 3-oxoacid CoA-transferase, A subunit YP_001313803.1 41190 D 366394 CDS YP_001313804.1 150377209 5319395 41894..42577 1 NC_009621.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: atc:AGR_L_642 3-oxoacid CoA-transferase subunit B; 3-oxoacid CoA-transferase, B subunit 42577 5319395 Smed_5093 Sinorhizobium medicae WSM419 3-oxoacid CoA-transferase, B subunit YP_001313804.1 41894 D 366394 CDS YP_001313805.1 150377210 5319396 42589..43791 1 NC_009621.1 TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: sme:SMb20589 putative beta-ketoadipyl CoA thiolase protein; beta-ketoadipyl CoA thiolase 43791 5319396 Smed_5094 Sinorhizobium medicae WSM419 beta-ketoadipyl CoA thiolase YP_001313805.1 42589 D 366394 CDS YP_001313806.1 150377211 5319398 complement(44227..45414) 1 NC_009621.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sme:SMa1450 robable acyl-CoA thiolase; acetyl-CoA acetyltransferase 45414 5319398 Smed_5096 Sinorhizobium medicae WSM419 acetyl-CoA acetyltransferase YP_001313806.1 44227 R 366394 CDS YP_001313807.1 150377212 5319399 complement(45441..46208) 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa1452 probable 3-hydroxyacyl-CoA dehydrogenase; short-chain dehydrogenase/reductase SDR 46208 5319399 Smed_5097 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313807.1 45441 R 366394 CDS YP_001313808.1 150377213 5319400 46329..47372 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa1454 putative transcription factor; helix-turn-helix domain-containing protein 47372 5319400 Smed_5098 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001313808.1 46329 D 366394 CDS YP_001313809.1 150377214 5319401 complement(47354..47890) 1 NC_009621.1 PFAM: RES domain protein; KEGG: sme:SMa1455 hypothetical protein; RES domain-containing protein 47890 5319401 Smed_5099 Sinorhizobium medicae WSM419 RES domain-containing protein YP_001313809.1 47354 R 366394 CDS YP_001313810.1 150377215 5319402 complement(47887..48276) 1 NC_009621.1 KEGG: sme:SMa1456 hypothetical protein; hypothetical protein 48276 5319402 Smed_5100 Sinorhizobium medicae WSM419 hypothetical protein YP_001313810.1 47887 R 366394 CDS YP_001313811.1 150377216 5319403 complement(48383..49378) 1 NC_009621.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sme:SMa1459 putative malate dehydrogenase; malate/L-lactate dehydrogenase 49378 5319403 Smed_5101 Sinorhizobium medicae WSM419 malate/L-lactate dehydrogenase YP_001313811.1 48383 R 366394 CDS YP_001313812.1 150377217 5319404 complement(49375..50499) 1 NC_009621.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMa1461 putative muconate cycloisomerase; mandelate racemase/muconate lactonizing protein 50499 5319404 Smed_5102 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001313812.1 49375 R 366394 CDS YP_001313813.1 150377218 5319405 complement(50652..51542) 1 NC_009621.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMa1462 putative ABC transport protein; glycine betaine ABC transporter substrate-binding protein 51542 5319405 Smed_5103 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001313813.1 50652 R 366394 CDS YP_001313814.1 150377219 5319406 complement(51565..52320) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1465 putative ABC transporter permease; binding-protein-dependent transport systems inner membrane component 52320 5319406 Smed_5104 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313814.1 51565 R 366394 CDS YP_001313815.1 150377220 5319407 complement(52317..53432) 1 NC_009621.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1466 probable ABC transporter ATP binding protein; glycine betaine/L-proline ABC transporter, ATPase subunit 53432 5319407 Smed_5105 Sinorhizobium medicae WSM419 glycine betaine/L-proline ABC transporter, ATPase subunit YP_001313815.1 52317 R 366394 CDS YP_001313816.1 150377221 5319408 complement(53429..54091) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1467 probable inner-membrane permease; binding-protein-dependent transport systems inner membrane component 54091 5319408 Smed_5106 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313816.1 53429 R 366394 CDS YP_001313817.1 150377222 5319409 complement(54115..54795) 1 NC_009621.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMa1471 hypothetical protein; isochorismatase hydrolase 54795 5319409 Smed_5107 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001313817.1 54115 R 366394 CDS YP_001313818.1 150377223 5319410 complement(54795..56099) 1 NC_009621.1 PFAM: peptidase M24; KEGG: sme:SMa1473 putative aminopeptidase; peptidase M24 56099 5319410 Smed_5108 Sinorhizobium medicae WSM419 peptidase M24 YP_001313818.1 54795 R 366394 CDS YP_001313819.1 150377224 5319411 complement(56192..57184) 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMa1476 putative AraC-family transcription regulator; AraC family transcriptional regulator 57184 5319411 Smed_5109 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001313819.1 56192 R 366394 CDS YP_001313820.1 150377225 5319412 complement(57192..58727) 1 NC_009621.1 PFAM: trimethylamine methyltransferase; KEGG: sme:SMa1478 putative methyltransferase; trimethylamine methyltransferase 58727 5319412 Smed_5110 Sinorhizobium medicae WSM419 trimethylamine methyltransferase YP_001313820.1 57192 R 366394 CDS YP_001313821.1 150377226 5319413 58959..59846 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1480 probable LysR-type activator; LysR family transcriptional regulator 59846 5319413 Smed_5111 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313821.1 58959 D 366394 CDS YP_001313822.1 150377227 5319414 60085..62505 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMa1483 putative dimethylglycine dehydrogenase; FAD dependent oxidoreductase 62505 5319414 Smed_5112 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001313822.1 60085 D 366394 CDS YP_001313823.1 150377228 5319415 62783..65998 1 NC_009621.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sme:SMa1548 hypothetical protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 65998 5319415 Smed_5113 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001313823.1 62783 D 366394 CDS YP_001313824.1 150377229 5319416 66185..66877 1 NC_009621.1 PFAM: regulatory protein LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMa1550 putative response regulator of two-component system; two component LuxR family transcriptional regulator 66877 5319416 Smed_5114 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001313824.1 66185 D 366394 CDS YP_001313825.1 150377230 5319417 67040..68398 1 NC_009621.1 PFAM: MCP methyltransferase CheR-type; Tetratricopeptide TPR_2 repeat protein; KEGG: sme:SMa1552 putative methyltransferase - chemotaxis; protein-glutamate O-methyltransferase 68398 5319417 Smed_5115 Sinorhizobium medicae WSM419 protein-glutamate O-methyltransferase YP_001313825.1 67040 D 366394 CDS YP_001313826.1 150377231 5319418 68395..69063 1 NC_009621.1 PFAM: CheW domain protein; KEGG: sme:SMa1554 putative purine-binding chemotaxis protein CheW; putative CheW protein 69063 5319418 Smed_5116 Sinorhizobium medicae WSM419 putative CheW protein YP_001313826.1 68395 D 366394 CDS YP_001313827.1 150377232 5319419 69044..70681 1 NC_009621.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sme:SMa1556 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 70681 5319419 Smed_5117 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001313827.1 69044 D 366394 CDS YP_001313828.1 150377233 5319420 70668..72791 1 NC_009621.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: sme:SMa1558 putative histidine kinase, chemotaxis; CheA signal transduction histidine kinase 72791 5319420 Smed_5118 Sinorhizobium medicae WSM419 CheA signal transduction histidine kinase YP_001313828.1 70668 D 366394 CDS YP_001313829.1 150377234 5319421 72801..73832 1 NC_009621.1 PFAM: CheB methylesterase; KEGG: sme:SMa1561 probable CheB2 chemotaxis methylesterase; response regulator receiver modulated CheB methylesterase 73832 5319421 Smed_5119 Sinorhizobium medicae WSM419 response regulator receiver modulated CheB methylesterase YP_001313829.1 72801 D 366394 CDS YP_001313830.1 150377235 5319422 complement(74061..75026) 1 NC_009621.1 PFAM: type II secretion system protein; KEGG: sme:SMa1562 hypothetical protein; type II secretion system protein 75026 5319422 Smed_5120 Sinorhizobium medicae WSM419 type II secretion system protein YP_001313830.1 74061 R 366394 CDS YP_001313831.1 150377236 5319423 complement(75035..76033) 1 NC_009621.1 PFAM: type II secretion system protein; KEGG: sme:SMa1564 hypothetical protein; type II secretion system protein 76033 5319423 Smed_5121 Sinorhizobium medicae WSM419 type II secretion system protein YP_001313831.1 75035 R 366394 CDS YP_001313832.1 150377237 5319424 complement(76062..77495) 1 NC_009621.1 PFAM: type II secretion system protein E; KEGG: sme:SMa1568 probable CpaF2 pilus assembly protein; type II secretion system protein E 77495 5319424 Smed_5122 Sinorhizobium medicae WSM419 type II secretion system protein E YP_001313832.1 76062 R 366394 CDS YP_001313833.1 150377238 5319425 complement(77596..77763) 1 NC_009621.1 PFAM: Flp/Fap pilin component; KEGG: sme:SMa1570 probable PilA2 pilus assembly protein; Flp/Fap pilin component 77763 5319425 Smed_5123 Sinorhizobium medicae WSM419 Flp/Fap pilin component YP_001313833.1 77596 R 366394 CDS YP_001313834.1 150377239 5319426 complement(78055..78480) 1 NC_009621.1 PFAM: TadE family protein; KEGG: sme:SMa1572 hypothetical protein; TadE family protein 78480 5319426 Smed_5124 Sinorhizobium medicae WSM419 TadE family protein YP_001313834.1 78055 R 366394 CDS YP_001313835.1 150377240 5319427 complement(78477..80240) 1 NC_009621.1 PFAM: TadE family protein; KEGG: sme:SMa1573 probable CpaE2 pilus assembly protein; response regulator receiver protein 80240 5319427 Smed_5125 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001313835.1 78477 R 366394 CDS YP_001313836.1 150377241 5319428 complement(80245..81036) 1 NC_009621.1 PFAM: SAF domain protein; KEGG: sme:SMa1576 probable CpaB2 pilus assembly protein; SAF domain-containing protein 81036 5319428 Smed_5126 Sinorhizobium medicae WSM419 SAF domain-containing protein YP_001313836.1 80245 R 366394 CDS YP_001313837.1 150377242 5319429 complement(81081..81593) 1 NC_009621.1 PFAM: peptidase A24A prepilin type IV; KEGG: sme:SMa1578 prepilin peptidase CpaA; peptidase A24A prepilin type IV 81593 5319429 Smed_5127 Sinorhizobium medicae WSM419 peptidase A24A prepilin type IV YP_001313837.1 81081 R 366394 CDS YP_001313838.1 150377243 5319430 81810..83120 1 NC_009621.1 KEGG: sme:SMa1579 hypothetical protein; hypothetical protein 83120 5319430 Smed_5128 Sinorhizobium medicae WSM419 hypothetical protein YP_001313838.1 81810 D 366394 CDS YP_001313839.1 150377244 5319431 83205..83717 1 NC_009621.1 KEGG: sme:SMa1580 hypothetical protein; hypothetical protein 83717 5319431 Smed_5129 Sinorhizobium medicae WSM419 hypothetical protein YP_001313839.1 83205 D 366394 CDS YP_001313840.1 150377245 5319432 complement(83762..84289) 1 NC_009621.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMa0166 hypothetical protein; TPR repeat-containing protein 84289 5319432 Smed_5130 Sinorhizobium medicae WSM419 TPR repeat-containing protein YP_001313840.1 83762 R 366394 CDS YP_001313841.1 150377246 5319433 complement(84311..84622) 1 NC_009621.1 KEGG: sme:SMa0164 hypothetical protein; hypothetical protein 84622 5319433 Smed_5131 Sinorhizobium medicae WSM419 hypothetical protein YP_001313841.1 84311 R 366394 CDS YP_001313842.1 150377247 5319434 complement(84619..86019) 1 NC_009621.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: sme:SMa0163 probable PilQ pilus assembly protein; type II and III secretion system protein 86019 5319434 Smed_5132 Sinorhizobium medicae WSM419 type II and III secretion system protein YP_001313842.1 84619 R 366394 CDS YP_001313843.1 150377248 5319435 complement(86253..86927) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0160 putative GntR-family transcription regulator; GntR family transcriptional regulator 86927 5319435 Smed_5133 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313843.1 86253 R 366394 CDS YP_001313844.1 150377249 5319436 87054..88058 1 NC_009621.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMa0157 hypothetical protein; TRAP dicarboxylate transporter subunit DctP 88058 5319436 Smed_5134 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001313844.1 87054 D 366394 CDS YP_001313845.1 150377250 5319437 88129..88698 1 NC_009621.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMa0155 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 88698 5319437 Smed_5135 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001313845.1 88129 D 366394 CDS YP_001313846.1 150377251 5319438 88695..90011 1 NC_009621.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMa0151 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 90011 5319438 Smed_5136 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001313846.1 88695 D 366394 CDS YP_001313847.1 150377252 5319439 90008..91447 1 NC_009621.1 PFAM: Malonyl-CoA decarboxylase; KEGG: sme:SMa0151 hypothetical protein; malonyl-CoA decarboxylase 91447 5319439 Smed_5137 Sinorhizobium medicae WSM419 malonyl-CoA decarboxylase YP_001313847.1 90008 D 366394 CDS YP_001313848.1 150377253 5319440 91444..92976 1 NC_009621.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 92976 5319440 Smed_5138 Sinorhizobium medicae WSM419 malonyl-CoA synthase YP_001313848.1 91444 D 366394 CDS YP_001313849.1 150377254 5319441 complement(92998..93480) 1 NC_009621.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein 93480 5319441 Smed_5139 Sinorhizobium medicae WSM419 transcription elongation factor regulatory protein YP_001313849.1 92998 R 366394 CDS YP_001313850.1 150377255 5319442 93698..94414 1 NC_009621.1 KEGG: sme:SMa0148 hypothetical protein; hypothetical protein 94414 5319442 Smed_5140 Sinorhizobium medicae WSM419 hypothetical protein YP_001313850.1 93698 D 366394 CDS YP_001313851.1 150377256 5319443 94700..94909 1 NC_009621.1 KEGG: sme:SMa0146 hypothetical protein; hypothetical protein 94909 5319443 Smed_5141 Sinorhizobium medicae WSM419 hypothetical protein YP_001313851.1 94700 D 366394 CDS YP_001313852.1 150377257 5319444 complement(94955..95737) 1 NC_009621.1 KEGG: sme:SMa0144 hypothetical protein; putative transmembrane anti-sigma factor 95737 5319444 Smed_5142 Sinorhizobium medicae WSM419 putative transmembrane anti-sigma factor YP_001313852.1 94955 R 366394 CDS YP_001313853.1 150377258 5319445 complement(95734..96276) 1 NC_009621.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMa0143 putative RpoE6 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 96276 5319445 Smed_5143 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001313853.1 95734 R 366394 CDS YP_001313854.1 150377259 5319446 96469..97863 1 NC_009621.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: sme:SMa0142 possible protease; peptidase S8/S53 subtilisin kexin sedolisin 97863 5319446 Smed_5144 Sinorhizobium medicae WSM419 peptidase S8/S53 subtilisin kexin sedolisin YP_001313854.1 96469 D 366394 CDS YP_001313855.1 150377260 5319447 complement(98009..98347) 1 NC_009621.1 KEGG: sme:SMa0117 hypothetical protein; hypothetical protein 98347 5319447 Smed_5145 Sinorhizobium medicae WSM419 hypothetical protein YP_001313855.1 98009 R 366394 CDS YP_001313856.1 150377261 5319448 complement(98344..99522) 1 NC_009621.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: sme:SMa0116 putative DnaJ/CbpA-type protein; chaperone DnaJ domain-containing protein 99522 5319448 Smed_5146 Sinorhizobium medicae WSM419 chaperone DnaJ domain-containing protein YP_001313856.1 98344 R 366394 CDS YP_001313857.1 150377262 5319449 complement(99570..100376) 1 NC_009621.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rle:RL2065 hypothetical protein; endonuclease/exonuclease/phosphatase 100376 5319449 Smed_5147 Sinorhizobium medicae WSM419 endonuclease/exonuclease/phosphatase YP_001313857.1 99570 R 366394 CDS YP_001313858.1 150377263 5319450 complement(100452..101996) 1 NC_009621.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa0185 possible transmembrane-transport protein; major facilitator transporter 101996 5319450 Smed_5148 Sinorhizobium medicae WSM419 major facilitator transporter YP_001313858.1 100452 R 366394 CDS YP_001313859.1 150377264 5319451 102200..102550 1 NC_009621.1 KEGG: ret:RHE_CH01058 hypothetical protein; hypothetical protein 102550 5319451 Smed_5149 Sinorhizobium medicae WSM419 hypothetical protein YP_001313859.1 102200 D 366394 CDS YP_001313860.1 150377265 5319452 complement(102659..103102) 1 NC_009621.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bja:bll3153 hypothetical protein; activator of Hsp90 ATPase 1 family protein 103102 5319452 Smed_5150 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001313860.1 102659 R 366394 CDS YP_001313861.1 150377266 5319453 complement(103146..104492) 1 NC_009621.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase IS4 family protein 104492 5319453 Smed_5151 Sinorhizobium medicae WSM419 transposase IS4 family protein YP_001313861.1 103146 R 366394 CDS YP_001313862.1 150377267 5319454 complement(104798..105466) 1 NC_009621.1 KEGG: sme:SMa0254 hypothetical protein; hypothetical protein 105466 5319454 Smed_5152 Sinorhizobium medicae WSM419 hypothetical protein YP_001313862.1 104798 R 366394 CDS YP_001313863.1 150377268 5319455 complement(105534..107723) 1 NC_009621.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE4 domain protein; KEGG: sme:SMa0137 putative kinase/esterase; diguanylate cyclase/phosphodiesterase 107723 5319455 Smed_5153 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001313863.1 105534 R 366394 CDS YP_001313864.1 150377269 5319456 complement(107886..109877) 1 NC_009621.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMa0136 hypothetical protein; hypothetical protein 109877 5319456 Smed_5154 Sinorhizobium medicae WSM419 hypothetical protein YP_001313864.1 107886 R 366394 CDS YP_001313865.1 150377270 5319457 110162..110476 1 NC_009621.1 KEGG: atc:AGR_pAT_414 hypothetical protein; hypothetical protein 110476 5319457 Smed_5155 Sinorhizobium medicae WSM419 hypothetical protein YP_001313865.1 110162 D 366394 CDS YP_001313866.1 150377271 5319458 110623..111228 1 NC_009621.1 KEGG: sme:SMa0134 hypothetical protein; hypothetical protein 111228 5319458 Smed_5156 Sinorhizobium medicae WSM419 hypothetical protein YP_001313866.1 110623 D 366394 CDS YP_001313867.1 150377272 5319459 complement(111301..112677) 1 NC_009621.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sme:SMb20069 putative amino acid carrier protein; amino acid carrier protein 112677 5319459 Smed_5157 Sinorhizobium medicae WSM419 amino acid carrier protein YP_001313867.1 111301 R 366394 CDS YP_001313868.1 150377273 5319460 complement(112787..113029) 1 NC_009621.1 hypothetical protein 113029 5319460 Smed_5158 Sinorhizobium medicae WSM419 hypothetical protein YP_001313868.1 112787 R 366394 CDS YP_001313869.1 150377274 5319461 complement(113034..113321) 1 NC_009621.1 KEGG: sme:SMa0132 hypothetical protein; hypothetical protein 113321 5319461 Smed_5159 Sinorhizobium medicae WSM419 hypothetical protein YP_001313869.1 113034 R 366394 CDS YP_001313870.1 150377275 5319462 complement(113342..114388) 1 NC_009621.1 PFAM: fatty acid desaturase; KEGG: sme:SMa0130 putative fatty acid desaturase; fatty acid desaturase 114388 5319462 Smed_5160 Sinorhizobium medicae WSM419 fatty acid desaturase YP_001313870.1 113342 R 366394 CDS YP_001313871.1 150377276 5319463 complement(114474..114899) 1 NC_009621.1 KEGG: sme:SMa0128 hypothetical protein; hypothetical protein 114899 5319463 Smed_5161 Sinorhizobium medicae WSM419 hypothetical protein YP_001313871.1 114474 R 366394 CDS YP_001313872.1 150377277 5319464 complement(115069..115278) 1 NC_009621.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMa0126 putative cold shock protein; cold-shock DNA-binding domain-containing protein 115278 5319464 Smed_5162 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001313872.1 115069 R 366394 CDS YP_001313873.1 150377278 5319465 complement(115546..116511) 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa0110 putative ABC transporter ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 116511 5319465 Smed_5163 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001313873.1 115546 R 366394 CDS YP_001313874.1 150377279 5319466 complement(116508..117422) 1 NC_009621.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa0108 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 117422 5319466 Smed_5164 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313874.1 116508 R 366394 CDS YP_001313875.1 150377280 5319467 complement(117419..118240) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0106 putative ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 118240 5319467 Smed_5165 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313875.1 117419 R 366394 CDS YP_001313876.1 150377281 5319468 complement(118245..119180) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0105 putative ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 119180 5319468 Smed_5166 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001313876.1 118245 R 366394 CDS YP_001313877.1 150377282 5319469 complement(119261..120853) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa0104 putative ABC transporter, periplasmic solute-binding protein; 4-phytase 120853 5319469 Smed_5167 Sinorhizobium medicae WSM419 4-phytase YP_001313877.1 119261 R 366394 CDS YP_001313878.1 150377283 5319470 complement(120910..122535) 1 NC_009621.1 PFAM: Amidohydrolase 3; KEGG: sme:SMa0101 hypothetical protein; amidohydrolase 3 122535 5319470 Smed_5168 Sinorhizobium medicae WSM419 amidohydrolase 3 YP_001313878.1 120910 R 366394 CDS YP_001313879.1 150377284 5319471 122720..123661 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0097 putative transcriptional regulator; LysR family transcriptional regulator 123661 5319471 Smed_5169 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313879.1 122720 D 366394 CDS YP_001313880.1 150377285 5319472 complement(123669..124706) 1 NC_009621.1 PFAM: peptidase S58 DmpA; KEGG: sme:SMa0095 putative D-aminopeptidase; peptidase S58 DmpA 124706 5319472 Smed_5170 Sinorhizobium medicae WSM419 peptidase S58 DmpA YP_001313880.1 123669 R 366394 CDS YP_001313881.1 150377286 5319473 complement(124772..125623) 1 NC_009621.1 PFAM: aminotransferase class IV; KEGG: sme:SMa0093 putative D-alanine aminotransferase; class IV aminotransferase 125623 5319473 Smed_5171 Sinorhizobium medicae WSM419 class IV aminotransferase YP_001313881.1 124772 R 366394 CDS YP_001313882.1 150377287 5319474 125869..127419 1 NC_009621.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMa2111 hypothetical protein; hemolysin-type calcium-binding protein 127419 5319474 Smed_5172 Sinorhizobium medicae WSM419 hemolysin-type calcium-binding protein YP_001313882.1 125869 D 366394 CDS YP_001313883.1 150377288 5319475 128745..129920 1 NC_009621.1 PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: sme:SMa2395 RepA2 replication protein; cobyrinic acid ac-diamide synthase 129920 5319475 Smed_5173 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001313883.1 128745 D 366394 CDS YP_001313884.1 150377289 5319476 129917..130921 1 NC_009621.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: sme:SMa2393 RepB2 replication protein; parB-like partition protein 130921 5319476 Smed_5174 Sinorhizobium medicae WSM419 parB-like partition protein YP_001313884.1 129917 D 366394 CDS YP_001313885.1 150377290 5319477 131077..132285 1 NC_009621.1 PFAM: replication protein C; KEGG: sme:SMa2391 RepC2 replication protein; replication initiation protein RepC 132285 5319477 Smed_5175 Sinorhizobium medicae WSM419 replication initiation protein RepC YP_001313885.1 131077 D 366394 CDS YP_001313886.1 150377291 5319478 132282..132842 1 NC_009621.1 PFAM: protein of unknown function DUF1127; hypothetical protein 132842 5319478 Smed_5176 Sinorhizobium medicae WSM419 hypothetical protein YP_001313886.1 132282 D 366394 CDS YP_001313887.1 150377292 5319479 133447..133632 1 NC_009621.1 PFAM: periplasmic nitrate reductase NapE; KEGG: sme:SMa1241 NapE component of periplasmic nitrate reductase; periplasmic nitrate reductase NapE 133632 5319479 Smed_5177 Sinorhizobium medicae WSM419 periplasmic nitrate reductase NapE YP_001313887.1 133447 D 366394 CDS YP_001313888.1 150377293 5319480 133640..134140 1 NC_009621.1 TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMa1240 NapF Ferredoxin component of periplasmic nitrate reductase; ferredoxin-type protein NapF 134140 5319480 Smed_5178 Sinorhizobium medicae WSM419 ferredoxin-type protein NapF YP_001313888.1 133640 D 366394 CDS YP_001313889.1 150377294 5319481 134133..134420 1 NC_009621.1 PFAM: NapD family protein; KEGG: sme:SMa1239 NapD component of periplasmic nitrate reductase; NapD family protein 134420 5319481 Smed_5179 Sinorhizobium medicae WSM419 NapD family protein YP_001313889.1 134133 D 366394 CDS YP_001313890.1 150377295 5319482 134395..136899 1 NC_009621.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 136899 5319482 Smed_5180 Sinorhizobium medicae WSM419 nitrate reductase catalytic subunit YP_001313890.1 134395 D 366394 CDS YP_001313891.1 150377296 5319483 136917..137372 1 NC_009621.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sme:SMa1233 NapB periplasmic nitrate reductase; nitrate reductase cytochrome c-type subunit (NapB) 137372 5319483 Smed_5181 Sinorhizobium medicae WSM419 nitrate reductase cytochrome c-type subunit (NapB) YP_001313891.1 136917 D 366394 CDS YP_001313892.1 150377297 5319484 137376..138077 1 NC_009621.1 TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sme:SMa1232 NapC membrane protein, e-donor to periplasmic nitrate reductase; NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome 138077 5319484 Smed_5182 Sinorhizobium medicae WSM419 NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome YP_001313892.1 137376 D 366394 CDS YP_001313893.1 150377298 5319485 138490..138969 1 NC_009621.1 KEGG: sme:SMa0661 hypothetical protein; hypothetical protein 138969 5319485 Smed_5183 Sinorhizobium medicae WSM419 hypothetical protein YP_001313893.1 138490 D 366394 CDS YP_001313894.1 150377299 5319486 complement(139026..139661) 1 NC_009621.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 139661 fixK 5319486 fixK Sinorhizobium medicae WSM419 transcriptional regulator FixK YP_001313894.1 139026 R 366394 CDS YP_001313895.1 150377300 5319487 complement(139784..140053) 1 NC_009621.1 KEGG: sme:SMa0663 hypothetical protein; hypothetical protein 140053 5319487 Smed_5185 Sinorhizobium medicae WSM419 hypothetical protein YP_001313895.1 139784 R 366394 CDS YP_001313896.1 150377301 5319488 140192..141946 1 NC_009621.1 KEGG: sme:SMa0664 hypothetical protein; hypothetical protein 141946 5319488 Smed_5186 Sinorhizobium medicae WSM419 hypothetical protein YP_001313896.1 140192 D 366394 CDS YP_001313897.1 150377302 5319489 complement(141991..143136) 1 NC_009621.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMa0665 hypothetical protein; hypothetical protein 143136 5319489 Smed_5187 Sinorhizobium medicae WSM419 hypothetical protein YP_001313897.1 141991 R 366394 CDS YP_001313898.1 150377303 5319490 143690..144178 1 NC_009621.1 KEGG: sme:SMa0667 hypothetical protein; hypothetical protein 144178 5319490 Smed_5188 Sinorhizobium medicae WSM419 hypothetical protein YP_001313898.1 143690 D 366394 CDS YP_001313899.1 150377304 5319491 144182..145411 1 NC_009621.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMa0669 hypothetical protein; secretion protein HlyD family protein 145411 5319491 Smed_5189 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001313899.1 144182 D 366394 CDS YP_001313900.1 150377305 5319492 145523..146380 1 NC_009621.1 PFAM: protein of unknown function DUF344; KEGG: sme:SMa0670 probable regulatory protein; hypothetical protein 146380 5319492 Smed_5190 Sinorhizobium medicae WSM419 hypothetical protein YP_001313900.1 145523 D 366394 CDS YP_001313901.1 150377306 5319493 complement(146558..147235) 1 NC_009621.1 KEGG: sme:SMa0674 hypothetical protein; hypothetical protein 147235 5319493 Smed_5191 Sinorhizobium medicae WSM419 hypothetical protein YP_001313901.1 146558 R 366394 CDS YP_001313902.1 150377307 5319494 complement(147232..148377) 1 NC_009621.1 TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: sme:SMa0675 cation (Ca) exchange protein, possible; calcium/cation antiporter 148377 5319494 Smed_5192 Sinorhizobium medicae WSM419 calcium/cation antiporter YP_001313902.1 147232 R 366394 CDS YP_001313903.1 150377308 5319495 complement(148533..149474) 1 NC_009621.1 SMART: extracellular solute-binding protein family 3; KEGG: sme:SMa0677 glutamate/aspartate transport protein, putative; extracellular solute-binding protein 149474 5319495 Smed_5193 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001313903.1 148533 R 366394 CDS YP_001313904.1 150377309 5319496 complement(149504..150862) 1 NC_009621.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 150862 potE 5319496 potE Sinorhizobium medicae WSM419 putrescine transporter YP_001313904.1 149504 R 366394 CDS YP_001313905.1 150377310 5319497 complement(150890..153253) 1 NC_009621.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: sme:SMa0680 amino acid (ornithine, lysine, arginine) decarboxylase, probable; ornithine decarboxylase 153253 5319497 Smed_5195 Sinorhizobium medicae WSM419 ornithine decarboxylase YP_001313905.1 150890 R 366394 CDS YP_001313906.1 150377311 5319498 complement(153240..155510) 1 NC_009621.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: sme:SMa0682 decarboxylase, probable (lysine, ornithine, arginine); lysine decarboxylase 155510 5319498 Smed_5196 Sinorhizobium medicae WSM419 lysine decarboxylase YP_001313906.1 153240 R 366394 CDS YP_001313907.1 150377312 5319499 complement(155718..156743) 1 NC_009621.1 PFAM: cation efflux protein; KEGG: sme:SMa0683 hypothetical protein; cation efflux protein 156743 5319499 Smed_5197 Sinorhizobium medicae WSM419 cation efflux protein YP_001313907.1 155718 R 366394 CDS YP_001313908.1 150377313 5319500 complement(156791..158116) 1 NC_009621.1 PFAM: amino acid permease-associated region; KEGG: sme:SMa0684 probable transport protein; amino acid permease-associated protein 158116 5319500 Smed_5198 Sinorhizobium medicae WSM419 amino acid permease-associated protein YP_001313908.1 156791 R 366394 CDS YP_001313909.1 150377314 5319501 complement(158432..158938) 1 NC_009621.1 KEGG: sme:SMa0687 hypothetical protein; hypothetical protein 158938 5319501 Smed_5199 Sinorhizobium medicae WSM419 hypothetical protein YP_001313909.1 158432 R 366394 CDS YP_001313910.1 150377315 5319502 complement(159153..160103) 1 NC_009621.1 KEGG: sme:SMa0689 hypothetical protein; hypothetical protein 160103 5319502 Smed_5200 Sinorhizobium medicae WSM419 hypothetical protein YP_001313910.1 159153 R 366394 CDS YP_001313911.1 150377316 5319503 complement(160124..161521) 1 NC_009621.1 KEGG: sme:SMa0690 hypothetical protein; hypothetical protein 161521 5319503 Smed_5201 Sinorhizobium medicae WSM419 hypothetical protein YP_001313911.1 160124 R 366394 CDS YP_001313912.1 150377317 5319504 162271..163500 1 NC_009621.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 163500 5319504 Smed_5202 Sinorhizobium medicae WSM419 arginine deiminase YP_001313912.1 162271 D 366394 CDS YP_001313913.1 150377318 5319505 163540..164544 1 NC_009621.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 164544 5319505 Smed_5203 Sinorhizobium medicae WSM419 ornithine carbamoyltransferase YP_001313913.1 163540 D 366394 CDS YP_001313914.1 150377319 5319506 164547..165521 1 NC_009621.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 165521 5319506 Smed_5204 Sinorhizobium medicae WSM419 carbamate kinase YP_001313914.1 164547 D 366394 CDS YP_001313915.1 150377320 5319507 165743..166213 1 NC_009621.1 KEGG: sme:SMa0699 hypothetical protein; hypothetical protein 166213 5319507 Smed_5205 Sinorhizobium medicae WSM419 hypothetical protein YP_001313915.1 165743 D 366394 CDS YP_001313916.1 150377321 5319508 166597..166881 1 NC_009621.1 hypothetical protein 166881 5319508 Smed_5206 Sinorhizobium medicae WSM419 hypothetical protein YP_001313916.1 166597 D 366394 CDS YP_001313917.1 150377322 5319509 166863..167798 1 NC_009621.1 KEGG: rle:RL1645 hypothetical protein; hypothetical protein 167798 5319509 Smed_5207 Sinorhizobium medicae WSM419 hypothetical protein YP_001313917.1 166863 D 366394 CDS YP_001313918.1 150377323 5319510 167877..170057 1 NC_009621.1 PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: rle:RL1646 putative cellulose synthase catalytic subunit [UDP-forming]; cellulose synthase 170057 5319510 Smed_5208 Sinorhizobium medicae WSM419 cellulose synthase YP_001313918.1 167877 D 366394 CDS YP_001313919.1 150377324 5319511 170075..172396 1 NC_009621.1 PFAM: cellulose synthase subunit B; KEGG: rle:RL1647 putative cellulose synthase protein; cellulose synthase subunit B 172396 5319511 Smed_5209 Sinorhizobium medicae WSM419 cellulose synthase subunit B YP_001313919.1 170075 D 366394 CDS YP_001313920.1 150377325 5319512 172393..173427 1 NC_009621.1 PFAM: glycoside hydrolase family 8; KEGG: ret:RHE_CH01544 endoglucanase (glycoside hydrolase) protein; cellulase 173427 5319512 Smed_5210 Sinorhizobium medicae WSM419 cellulase YP_001313920.1 172393 D 366394 CDS YP_001313921.1 150377326 5319513 173424..175541 1 NC_009621.1 KEGG: rle:RL1649 hypothetical protein; hypothetical protein 175541 5319513 Smed_5211 Sinorhizobium medicae WSM419 hypothetical protein YP_001313921.1 173424 D 366394 CDS YP_001313922.1 150377327 5319514 complement(175562..175780) 1 NC_009621.1 KEGG: atu:Atu4891 IS 426 transposase; hypothetical protein 175780 5319514 Smed_5212 Sinorhizobium medicae WSM419 hypothetical protein YP_001313922.1 175562 R 366394 CDS YP_001313923.1 150377328 5319515 175924..176184 1 NC_009621.1 KEGG: sme:SMa0210 hypothetical protein; hypothetical protein 176184 5319515 Smed_5213 Sinorhizobium medicae WSM419 hypothetical protein YP_001313923.1 175924 D 366394 CDS YP_001313924.1 150377329 5319516 complement(176235..177614) 1 NC_009621.1 KEGG: sme:SMa1750 hypothetical protein; hypothetical protein 177614 5319516 Smed_5214 Sinorhizobium medicae WSM419 hypothetical protein YP_001313924.1 176235 R 366394 CDS YP_001313925.1 150377330 5319517 177956..178951 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMa0319 putative AraC-type regulator; helix-turn-helix domain-containing protein 178951 5319517 Smed_5215 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001313925.1 177956 D 366394 CDS YP_001313926.1 150377331 5319518 179098..179847 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0320 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 179847 5319518 Smed_5216 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313926.1 179098 D 366394 CDS YP_001313927.1 150377332 5319519 179905..180453 1 NC_009621.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMa0322 hypothetical protein; flavin reductase domain-containing protein 180453 5319519 Smed_5217 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001313927.1 179905 D 366394 CDS YP_001313928.1 150377333 5319520 180508..180792 1 NC_009621.1 PFAM: protein of unknown function DUF1330; KEGG: sme:SMa0323 hypothetical protein; hypothetical protein 180792 5319520 Smed_5218 Sinorhizobium medicae WSM419 hypothetical protein YP_001313928.1 180508 D 366394 CDS YP_001313929.1 150377334 5319521 180894..181196 1 NC_009621.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sme:SMa0325 hypothetical protein; antibiotic biosynthesis monooxygenase 181196 5319521 Smed_5219 Sinorhizobium medicae WSM419 antibiotic biosynthesis monooxygenase YP_001313929.1 180894 D 366394 CDS YP_001313930.1 150377335 5319522 181218..182057 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0326 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 182057 5319522 Smed_5220 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313930.1 181218 D 366394 CDS YP_001313931.1 150377336 5319524 complement(182945..183379) 1 NC_009621.1 PFAM: DoxX family protein; KEGG: pfl:PFL_2372 SURF4 domain protein; DoxX family protein 183379 5319524 Smed_5222 Sinorhizobium medicae WSM419 DoxX family protein YP_001313931.1 182945 R 366394 CDS YP_001313932.1 150377337 5319525 complement(183557..184333) 1 NC_009621.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 184333 fabG 5319525 fabG Sinorhizobium medicae WSM419 3-ketoacyl-(acyl-carrier-protein) reductase YP_001313932.1 183557 R 366394 CDS YP_001313933.1 150377338 5319526 complement(184345..184791) 1 NC_009621.1 PFAM: protein of unknown function DUF1486; KEGG: sme:SMa0337 hypothetical protein; hypothetical protein 184791 5319526 Smed_5224 Sinorhizobium medicae WSM419 hypothetical protein YP_001313933.1 184345 R 366394 CDS YP_001313934.1 150377339 5319527 complement(184816..185589) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0339 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 185589 5319527 Smed_5225 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001313934.1 184816 R 366394 CDS YP_001313935.1 150377340 5319528 complement(185661..186272) 1 NC_009621.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 186272 5319528 Smed_5226 Sinorhizobium medicae WSM419 TrpR binding protein WrbA YP_001313935.1 185661 R 366394 CDS YP_001313936.1 150377341 5319529 complement(186517..187113) 1 NC_009621.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sme:SMa0349 hypothetical protein; NADP oxidoreductase coenzyme F420-dependent 187113 5319529 Smed_5227 Sinorhizobium medicae WSM419 NADP oxidoreductase coenzyme F420-dependent YP_001313936.1 186517 R 366394 CDS YP_001313937.1 150377342 5319530 complement(187141..188037) 1 NC_009621.1 PFAM: Pirin domain protein; KEGG: sme:SMa0352 hypothetical protein; pirin domain-containing protein 188037 5319530 Smed_5228 Sinorhizobium medicae WSM419 pirin domain-containing protein YP_001313937.1 187141 R 366394 CDS YP_001313938.1 150377343 5319531 188138..189061 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0353 putative LysR-type regulator; LysR family transcriptional regulator 189061 5319531 Smed_5229 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313938.1 188138 D 366394 CDS YP_001313939.1 150377344 5319532 complement(189177..190178) 1 NC_009621.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00814 hypothetical signal peptide protein; beta-lactamase domain-containing protein 190178 5319532 Smed_5230 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001313939.1 189177 R 366394 CDS YP_001313940.1 150377345 5319533 190375..191178 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mxa:MXAN_0707 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 191178 5319533 Smed_5231 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001313940.1 190375 D 366394 CDS YP_001313941.1 150377346 5319534 complement(191348..192652) 1 NC_009621.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMa1677 hypothetical protein; amidohydrolase 192652 5319534 Smed_5232 Sinorhizobium medicae WSM419 amidohydrolase YP_001313941.1 191348 R 366394 CDS YP_001313942.1 150377347 5319535 193043..193384 1 NC_009621.1 hypothetical protein 193384 5319535 Smed_5233 Sinorhizobium medicae WSM419 hypothetical protein YP_001313942.1 193043 D 366394 CDS YP_001313943.1 150377348 5319536 complement(193726..194814) 1 NC_009621.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMa1676 hypothetical protein; hypothetical protein 194814 5319536 Smed_5234 Sinorhizobium medicae WSM419 hypothetical protein YP_001313943.1 193726 R 366394 CDS YP_001313944.1 150377349 5319537 complement(194902..196740) 1 NC_009621.1 PFAM: Citrate transporter; KEGG: mgm:Mmc1_1409 citrate transporter; citrate transporter 196740 5319537 Smed_5235 Sinorhizobium medicae WSM419 citrate transporter YP_001313944.1 194902 R 366394 CDS YP_001313945.1 150377350 5319538 complement(196826..198037) 1 NC_009621.1 PFAM: peptidase M20; peptidase M42 family protein; peptidase dimerisation domain protein; KEGG: bja:bll2699 hypothetical protein; peptidase M20 198037 5319538 Smed_5236 Sinorhizobium medicae WSM419 peptidase M20 YP_001313945.1 196826 R 366394 CDS YP_001313946.1 150377351 5319539 complement(198075..199619) 1 NC_009621.1 PFAM: AbgT putative transporter; KEGG: cpe:CPE0072 hypothetical protein; AbgT putative transporter 199619 5319539 Smed_5237 Sinorhizobium medicae WSM419 AbgT putative transporter YP_001313946.1 198075 R 366394 CDS YP_001313947.1 150377352 5319540 199984..201030 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr6727 transcriptional regulator; helix-turn-helix domain-containing protein 201030 5319540 Smed_5238 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001313947.1 199984 D 366394 CDS YP_001313948.1 150377353 5319541 complement(201204..201887) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0222 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 201887 5319541 Smed_5239 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313948.1 201204 R 366394 CDS YP_001313949.1 150377354 5319542 202030..203544 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0220 putative aldehyde; aldehyde dehydrogenase 203544 5319542 Smed_5240 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001313949.1 202030 D 366394 CDS YP_001313950.1 150377355 5319543 203666..204616 1 NC_009621.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMa0218 putative ABC transporter, periplasmic solute-binding protein; periplasmic binding protein/LacI transcriptional regulator 204616 5319543 Smed_5241 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001313950.1 203666 D 366394 CDS YP_001313951.1 150377356 5319544 204626..205705 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa0217 putative ABC transporter, permease; monosaccharide-transporting ATPase 205705 5319544 Smed_5242 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313951.1 204626 D 366394 CDS YP_001313952.1 150377357 5319545 205705..206442 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0216 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 206442 5319545 Smed_5243 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313952.1 205705 D 366394 CDS YP_001313953.1 150377358 5319546 206912..207472 1 NC_009621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMa1660 putative acetyltransferase; GCN5-like N-acetyltransferase 207472 5319546 Smed_5244 Sinorhizobium medicae WSM419 GCN5-like N-acetyltransferase YP_001313953.1 206912 D 366394 CDS YP_001313954.1 150377359 5319547 complement(207720..208643) 1 NC_009621.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMa1711 probable ArgI2 arginase; arginase/agmatinase/formiminoglutamase 208643 5319547 Smed_5245 Sinorhizobium medicae WSM419 arginase/agmatinase/formiminoglutamase YP_001313954.1 207720 R 366394 CDS YP_001313955.1 150377360 5319548 complement(208664..209536) 1 NC_009621.1 KEGG: sme:SMa1445 hypothetical protein; hypothetical protein 209536 5319548 Smed_5246 Sinorhizobium medicae WSM419 hypothetical protein YP_001313955.1 208664 R 366394 CDS YP_001313956.1 150377361 5319549 complement(209870..211081) 1 NC_009621.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 211081 5319549 Smed_5247 Sinorhizobium medicae WSM419 nitric oxide dioxygenase YP_001313956.1 209870 R 366394 CDS YP_001313957.1 150377362 5319550 211462..212523 1 NC_009621.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: reh:H16_B1020 predicted extracellular nuclease; endonuclease/exonuclease/phosphatase 212523 5319550 Smed_5248 Sinorhizobium medicae WSM419 endonuclease/exonuclease/phosphatase YP_001313957.1 211462 D 366394 CDS YP_001313958.1 150377363 5319551 212723..213454 1 NC_009621.1 PFAM: putative esterase; phospholipase/Carboxylesterase; KEGG: sme:SMb20552 hypothetical protein; phospholipase/carboxylesterase 213454 5319551 Smed_5249 Sinorhizobium medicae WSM419 phospholipase/carboxylesterase YP_001313958.1 212723 D 366394 CDS YP_001313959.1 150377364 5319552 213459..213614 1 NC_009621.1 hypothetical protein 213614 5319552 Smed_5250 Sinorhizobium medicae WSM419 hypothetical protein YP_001313959.1 213459 D 366394 CDS YP_001313960.1 150377365 5319553 213674..214078 1 NC_009621.1 KEGG: sme:SMc01548 hypothetical protein; hypothetical protein 214078 5319553 Smed_5251 Sinorhizobium medicae WSM419 hypothetical protein YP_001313960.1 213674 D 366394 CDS YP_001313961.1 150377366 5319554 complement(214150..214533) 1 NC_009621.1 KEGG: sme:SMa0287 hypothetical protein; hypothetical protein 214533 5319554 Smed_5252 Sinorhizobium medicae WSM419 hypothetical protein YP_001313961.1 214150 R 366394 CDS YP_001313962.1 150377367 5319555 complement(214593..215429) 1 NC_009621.1 TIGRFAM: putative integral membrane protein TIGR02587; KEGG: sme:SMa0288 hypothetical protein; hypothetical protein 215429 5319555 Smed_5253 Sinorhizobium medicae WSM419 hypothetical protein YP_001313962.1 214593 R 366394 CDS YP_001313963.1 150377368 5319556 215605..215916 1 NC_009621.1 KEGG: sme:SMa0291 hypothetical protein; hypothetical protein 215916 5319556 Smed_5254 Sinorhizobium medicae WSM419 hypothetical protein YP_001313963.1 215605 D 366394 CDS YP_001313964.1 150377369 5319557 complement(215981..216571) 1 NC_009621.1 PFAM: protein of unknown function DUF159; KEGG: ret:RHE_PF00147 hypothetical protein; hypothetical protein 216571 5319557 Smed_5255 Sinorhizobium medicae WSM419 hypothetical protein YP_001313964.1 215981 R 366394 CDS YP_001313965.1 150377370 5319558 216627..217136 1 NC_009621.1 KEGG: sme:SMa0421 hypothetical protein; hypothetical protein 217136 5319558 Smed_5256 Sinorhizobium medicae WSM419 hypothetical protein YP_001313965.1 216627 D 366394 CDS YP_001313966.1 150377371 5319559 217186..217848 1 NC_009621.1 PFAM: Glutathione S-transferase domain; KEGG: pde:Pden_2579 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 217848 5319559 Smed_5257 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001313966.1 217186 D 366394 CDS YP_001313967.1 150377372 5319560 complement(217963..218814) 1 NC_009621.1 KEGG: sme:SMa0259 hypothetical protein; hypothetical protein 218814 5319560 Smed_5258 Sinorhizobium medicae WSM419 hypothetical protein YP_001313967.1 217963 R 366394 CDS YP_001313968.1 150377373 5319561 complement(218832..220295) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0260 GabD3 succinate-semialdehyde dehdyrogenase; aldehyde dehydrogenase 220295 5319561 Smed_5259 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001313968.1 218832 R 366394 CDS YP_001313969.1 150377374 5319562 complement(220316..221515) 1 NC_009621.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sme:SMa0263 putative alcohol; alcohol dehydrogenase 221515 5319562 Smed_5260 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001313969.1 220316 R 366394 CDS YP_001313970.1 150377375 5319563 complement(221538..222542) 1 NC_009621.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sme:SMa0265 putative malate dehydrogenase; malate/L-lactate dehydrogenase 222542 5319563 Smed_5261 Sinorhizobium medicae WSM419 malate/L-lactate dehydrogenase YP_001313970.1 221538 R 366394 CDS YP_001313971.1 150377376 5319564 222642..223328 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0267 putative GntR-family regulator; GntR family transcriptional regulator 223328 5319564 Smed_5262 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001313971.1 222642 D 366394 CDS YP_001313972.1 150377377 5319565 223325..224917 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0270 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 224917 5319565 Smed_5263 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001313972.1 223325 D 366394 CDS YP_001313973.1 150377378 5319566 224883..225878 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa0271 putative ABC transporter - permease; monosaccharide-transporting ATPase 225878 5319566 Smed_5264 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001313973.1 224883 D 366394 CDS YP_001313974.1 150377379 5319567 225907..226875 1 NC_009621.1 KEGG: sme:SMa0273 putative ABC transporter, periplasmic solute-binding protein; putative ABC transporter, periplasmic solute-binding protein 226875 5319567 Smed_5265 Sinorhizobium medicae WSM419 putative ABC transporter, periplasmic solute-binding protein YP_001313974.1 225907 D 366394 CDS YP_001313975.1 150377380 5319568 226938..227525 1 NC_009621.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: sme:SMa0275 hypothetical protein; PfpI family intracellular peptidase 227525 5319568 Smed_5266 Sinorhizobium medicae WSM419 PfpI family intracellular peptidase YP_001313975.1 226938 D 366394 CDS YP_001313976.1 150377381 5319569 complement(227667..228041) 1 NC_009621.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMa1358 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 228041 5319569 Smed_5267 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001313976.1 227667 R 366394 CDS YP_001313977.1 150377382 5319570 complement(228108..228686) 1 NC_009621.1 KEGG: mag:amb3465 predicted protein tyrosine phosphatase; protein tyrosine phosphatase 228686 5319570 Smed_5268 Sinorhizobium medicae WSM419 protein tyrosine phosphatase YP_001313977.1 228108 R 366394 CDS YP_001313978.1 150377383 5319571 228844..229074 1 NC_009621.1 hypothetical protein 229074 5319571 Smed_5269 Sinorhizobium medicae WSM419 hypothetical protein YP_001313978.1 228844 D 366394 CDS YP_001313979.1 150377384 5319572 229204..230130 1 NC_009621.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 230130 5319572 Smed_5270 Sinorhizobium medicae WSM419 DNA polymerase III subunit epsilon YP_001313979.1 229204 D 366394 CDS YP_001313980.1 150377385 5319573 complement(230167..230589) 1 NC_009621.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMa0089 hypothetical protein; endoribonuclease L-PSP 230589 5319573 Smed_5271 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001313980.1 230167 R 366394 CDS YP_001313981.1 150377386 5319574 230690..231592 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_4261 transcriptional regulator; LysR family transcriptional regulator 231592 5319574 Smed_5272 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313981.1 230690 D 366394 CDS YP_001313982.1 150377387 5319575 complement(231614..231919) 1 NC_009621.1 KEGG: sme:SMa1769 hypothetical protein; hypothetical protein 231919 5319575 Smed_5273 Sinorhizobium medicae WSM419 hypothetical protein YP_001313982.1 231614 R 366394 CDS YP_001313983.1 150377388 5319576 complement(232048..232992) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1720 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 232992 5319576 Smed_5274 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313983.1 232048 R 366394 CDS YP_001313984.1 150377389 5319577 233109..234911 1 NC_009621.1 PFAM: amidohydrolase; KEGG: sme:SMa1718 putative AdeC4 adenine deaminase; adenine deaminase 234911 5319577 Smed_5275 Sinorhizobium medicae WSM419 adenine deaminase YP_001313984.1 233109 D 366394 CDS YP_001313985.1 150377390 5319578 234959..236359 1 NC_009621.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sme:SMa1717 putative integral membrane transporter; xanthine/uracil/vitamin C permease 236359 5319578 Smed_5276 Sinorhizobium medicae WSM419 xanthine/uracil/vitamin C permease YP_001313985.1 234959 D 366394 CDS YP_001313986.1 150377391 5319579 236432..238219 1 NC_009621.1 TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMa1715 putative AdeC3 adenine deaminase; adenine deaminase 238219 5319579 Smed_5277 Sinorhizobium medicae WSM419 adenine deaminase YP_001313986.1 236432 D 366394 CDS YP_001313987.1 150377392 5319580 238511..241849 1 NC_009621.1 PFAM: Hemolysin-type calcium-binding region; peptidase domain protein; KEGG: sme:SMb21543 putative outer membrane secretion protein; peptidase domain-containing protein 241849 5319580 Smed_5278 Sinorhizobium medicae WSM419 peptidase domain-containing protein YP_001313987.1 238511 D 366394 CDS YP_001313988.1 150377393 5319581 241913..242347 1 NC_009621.1 KEGG: sme:SMb21544 hypothetical protein; hypothetical protein 242347 5319581 Smed_5279 Sinorhizobium medicae WSM419 hypothetical protein YP_001313988.1 241913 D 366394 CDS YP_001313989.1 150377394 5319582 complement(242492..242938) 1 NC_009621.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: pde:Pden_4515 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 242938 5319582 Smed_5280 Sinorhizobium medicae WSM419 3-demethylubiquinone-9 3-methyltransferase YP_001313989.1 242492 R 366394 CDS YP_001313990.1 150377395 5319583 complement(243012..243884) 1 NC_009621.1 PFAM: NmrA family protein; KEGG: sme:SMa1957 hypothetical protein; NmrA family protein 243884 5319583 Smed_5281 Sinorhizobium medicae WSM419 NmrA family protein YP_001313990.1 243012 R 366394 CDS YP_001313991.1 150377396 5319584 243945..244877 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1956 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 244877 5319584 Smed_5282 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313991.1 243945 D 366394 CDS YP_001313992.1 150377397 5319585 245012..245932 1 NC_009621.1 PFAM: protein of unknown function DUF344; KEGG: sme:SMa0172 hypothetical protein; hypothetical protein 245932 5319585 Smed_5283 Sinorhizobium medicae WSM419 hypothetical protein YP_001313992.1 245012 D 366394 CDS YP_001313993.1 150377398 5319586 complement(246188..247180) 1 NC_009621.1 PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMa1927 hypothetical protein; hypothetical protein 247180 5319586 Smed_5284 Sinorhizobium medicae WSM419 hypothetical protein YP_001313993.1 246188 R 366394 CDS YP_001313994.1 150377399 5319587 complement(247452..248906) 1 NC_009621.1 PFAM: cation transporter; KEGG: sme:SMa1691 putative TrkH-like protein; cation transporter 248906 5319587 Smed_5285 Sinorhizobium medicae WSM419 cation transporter YP_001313994.1 247452 R 366394 CDS YP_001313995.1 150377400 5319588 complement(249089..249310) 1 NC_009621.1 KEGG: sme:SMa0031 hypothetical protein; hypothetical protein 249310 5319588 Smed_5286 Sinorhizobium medicae WSM419 hypothetical protein YP_001313995.1 249089 R 366394 CDS YP_001313996.1 150377401 5319589 complement(249324..251270) 1 NC_009621.1 PFAM: Hemolysin-type calcium-binding region; peptidase M10A and M12B matrixin and adamalysin; Peptidase M10 serralysin; SMART: peptidase metallopeptidase; KEGG: sme:SMa0034 possible protease; serralysin 251270 5319589 Smed_5287 Sinorhizobium medicae WSM419 serralysin YP_001313996.1 249324 R 366394 CDS YP_001313997.1 150377402 5319590 complement(251976..252920) 1 NC_009621.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMa1945 hypothetical protein; hypothetical protein 252920 5319590 Smed_5288 Sinorhizobium medicae WSM419 hypothetical protein YP_001313997.1 251976 R 366394 CDS YP_001313998.1 150377403 5319591 252933..253823 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1943 putative transcriptional regulator; LysR family transcriptional regulator 253823 5319591 Smed_5289 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001313998.1 252933 D 366394 CDS YP_001313999.1 150377404 5319593 complement(255141..255779) 1 NC_009621.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 255779 5319593 Smed_5291 Sinorhizobium medicae WSM419 TrpR binding protein WrbA YP_001313999.1 255141 R 366394 CDS YP_001314000.1 150377405 5319594 255935..256855 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_4563 transcriptional regulator, LysR family; LysR family transcriptional regulator 256855 5319594 Smed_5292 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314000.1 255935 D 366394 CDS YP_001314001.1 150377406 5319596 complement(257438..258097) 1 NC_009621.1 PFAM: Glutathione S-transferase domain; KEGG: reu:Reut_B3491 glutathione S-transferase, N-terminal:glutathione S-transferase, C-terminal; glutathione S-transferase domain-containing protein 258097 5319596 Smed_5294 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001314001.1 257438 R 366394 CDS YP_001314002.1 150377407 5319597 complement(258094..258573) 1 NC_009621.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rme:Rmet_1798 hypothetical protein; activator of Hsp90 ATPase 1 family protein 258573 5319597 Smed_5295 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001314002.1 258094 R 366394 CDS YP_001314003.1 150377408 5319598 complement(258573..258962) 1 NC_009621.1 PFAM: regulatory protein ArsR; KEGG: mlo:mll3772 transcriptional regulator; regulatory protein ArsR 258962 5319598 Smed_5296 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001314003.1 258573 R 366394 CDS YP_001314004.1 150377409 5319599 259172..260125 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0187 putative oxidoreductase; short chain dehydrogenase 260125 5319599 Smed_5297 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001314004.1 259172 D 366394 CDS YP_001314005.1 150377410 5319600 complement(260533..260661) 1 NC_009621.1 hypothetical protein 260661 5319600 Smed_5298 Sinorhizobium medicae WSM419 hypothetical protein YP_001314005.1 260533 R 366394 CDS YP_001314006.1 150377411 5319601 complement(260658..260975) 1 NC_009621.1 hypothetical protein 260975 5319601 Smed_5299 Sinorhizobium medicae WSM419 hypothetical protein YP_001314006.1 260658 R 366394 CDS YP_001314007.1 150377412 5319602 complement(260951..261169) 1 NC_009621.1 KEGG: sme:SMa1919 hypothetical protein; hypothetical protein 261169 5319602 Smed_5300 Sinorhizobium medicae WSM419 hypothetical protein YP_001314007.1 260951 R 366394 CDS YP_001314008.1 150377413 5319603 complement(261182..261463) 1 NC_009621.1 KEGG: sme:SMa1918 hypothetical protein; hypothetical protein 261463 5319603 Smed_5301 Sinorhizobium medicae WSM419 hypothetical protein YP_001314008.1 261182 R 366394 CDS YP_001314009.1 150377414 5319604 261787..262215 1 NC_009621.1 KEGG: sme:SMa1635 hypothetical protein; hypothetical protein 262215 5319604 Smed_5302 Sinorhizobium medicae WSM419 hypothetical protein YP_001314009.1 261787 D 366394 CDS YP_001314010.1 150377415 5319605 262226..262393 1 NC_009621.1 hypothetical protein 262393 5319605 Smed_5303 Sinorhizobium medicae WSM419 hypothetical protein YP_001314010.1 262226 D 366394 CDS YP_001314011.1 150377416 5319606 complement(262676..262951) 1 NC_009621.1 KEGG: sme:SMa1910 hypothetical protein; hypothetical protein 262951 5319606 Smed_5304 Sinorhizobium medicae WSM419 hypothetical protein YP_001314011.1 262676 R 366394 CDS YP_001314012.1 150377417 5319607 263027..263233 1 NC_009621.1 hypothetical protein 263233 5319607 Smed_5305 Sinorhizobium medicae WSM419 hypothetical protein YP_001314012.1 263027 D 366394 CDS YP_001314013.1 150377418 5319608 263318..263716 1 NC_009621.1 hypothetical protein 263716 5319608 Smed_5306 Sinorhizobium medicae WSM419 hypothetical protein YP_001314013.1 263318 D 366394 CDS YP_001314014.1 150377419 5319609 263929..264246 1 NC_009621.1 KEGG: sme:SMa1907 hypothetical protein; hypothetical protein 264246 5319609 Smed_5307 Sinorhizobium medicae WSM419 hypothetical protein YP_001314014.1 263929 D 366394 CDS YP_001314015.1 150377420 5319610 264328..264636 1 NC_009621.1 KEGG: atc:AGR_C_2256 hypothetical protein; hypothetical protein 264636 5319610 Smed_5308 Sinorhizobium medicae WSM419 hypothetical protein YP_001314015.1 264328 D 366394 CDS YP_001314016.1 150377421 5319611 complement(264695..265585) 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_L_3316 hypothetical protein; helix-turn-helix domain-containing protein 265585 5319611 Smed_5309 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001314016.1 264695 R 366394 CDS YP_001314017.1 150377422 5319612 265773..267776 1 NC_009621.1 PFAM: oxidoreductase domain protein; aldo/keto reductase; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: ret:RHE_PB00146 probable oxidoreductase protein; oxidoreductase domain-containing protein 267776 5319612 Smed_5310 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001314017.1 265773 D 366394 CDS YP_001314018.1 150377423 5319613 267960..268268 1 NC_009621.1 KEGG: atu:Atu5057 hypothetical protein; hypothetical protein 268268 5319613 Smed_5311 Sinorhizobium medicae WSM419 hypothetical protein YP_001314018.1 267960 D 366394 CDS YP_001314019.1 150377424 5319614 complement(268376..269491) 1 NC_009621.1 PFAM: aminotransferase class V; KEGG: sme:SMa1495 putative serine-pyruvate transaminase; Serine--pyruvate transaminase 269491 5319614 Smed_5312 Sinorhizobium medicae WSM419 Serine--pyruvate transaminase YP_001314019.1 268376 R 366394 CDS YP_001314020.1 150377425 5319615 complement(269842..270255) 1 NC_009621.1 KEGG: bja:blr6214 putative cytochrome c protein; hypothetical protein 270255 5319615 Smed_5313 Sinorhizobium medicae WSM419 hypothetical protein YP_001314020.1 269842 R 366394 CDS YP_001314021.1 150377426 5319616 complement(270328..270696) 1 NC_009621.1 hypothetical protein 270696 5319616 Smed_5314 Sinorhizobium medicae WSM419 hypothetical protein YP_001314021.1 270328 R 366394 CDS YP_001314022.1 150377427 5319618 complement(273531..274442) 1 NC_009621.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMa0196 putative gluconolactonase precursor; gluconolactonase 274442 5319618 Smed_5316 Sinorhizobium medicae WSM419 gluconolactonase YP_001314022.1 273531 R 366394 CDS YP_001314023.1 150377428 5319619 complement(274503..275444) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: rle:pRL120287 putative permease component of ABC transporter; inner-membrane translocator 275444 5319619 Smed_5317 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314023.1 274503 R 366394 CDS YP_001314024.1 150377429 5319620 complement(275441..276388) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: rle:pRL120286 putative permease component of ABC transporter; inner-membrane translocator 276388 5319620 Smed_5318 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314024.1 275441 R 366394 CDS YP_001314025.1 150377430 5319621 complement(276385..277881) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL120285 putative ATP-binding component of ABC transporter; ABC transporter-like protein 277881 5319621 Smed_5319 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314025.1 276385 R 366394 CDS YP_001314026.1 150377431 5319622 complement(277907..278923) 1 NC_009621.1 KEGG: sme:SMa0203 putative ABC transporter; putative ABC transporter 278923 5319622 Smed_5320 Sinorhizobium medicae WSM419 putative ABC transporter YP_001314026.1 277907 R 366394 CDS YP_001314027.1 150377432 5319623 279301..280554 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; KEGG: ret:RHE_PF00480 probable two-component sensor histidine kinase protein; putative signal transduction histidine kinase 280554 5319623 Smed_5321 Sinorhizobium medicae WSM419 putative signal transduction histidine kinase YP_001314027.1 279301 D 366394 CDS YP_001314028.1 150377433 5319624 280551..281270 1 NC_009621.1 PFAM: response regulator receiver; SMART: regulatory protein LuxR; KEGG: ret:RHE_PF00479 probable two-component response regulator protein; two component LuxR family transcriptional regulator 281270 5319624 Smed_5322 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001314028.1 280551 D 366394 CDS YP_001314029.1 150377434 5319625 281345..282613 1 NC_009621.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sme:SMa2301 putative response regulator; diguanylate cyclase 282613 5319625 Smed_5323 Sinorhizobium medicae WSM419 diguanylate cyclase YP_001314029.1 281345 D 366394 CDS YP_001314030.1 150377435 5319626 complement(282632..283390) 1 NC_009621.1 KEGG: rle:RL2742 hypothetical protein; hypothetical protein 283390 5319626 Smed_5324 Sinorhizobium medicae WSM419 hypothetical protein YP_001314030.1 282632 R 366394 CDS YP_001314031.1 150377436 5319627 complement(283427..285205) 1 NC_009621.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; cytochrome c biogenesis protein transmembrane region; Redoxin domain protein; KEGG: rle:RL2741 putative transmembrane thioredoxin/DipZ protein; redoxin domain-containing protein 285205 5319627 Smed_5325 Sinorhizobium medicae WSM419 redoxin domain-containing protein YP_001314031.1 283427 R 366394 CDS YP_001314032.1 150377437 5319629 complement(286144..286803) 1 NC_009621.1 PFAM: regulatory protein TetR; KEGG: sme:SMa2387 hypothetical protein; TetR family transcriptional regulator 286803 5319629 Smed_5327 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001314032.1 286144 R 366394 CDS YP_001314033.1 150377438 5319630 286913..288487 1 NC_009621.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa2385 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 288487 5319630 Smed_5328 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314033.1 286913 D 366394 CDS YP_001314034.1 150377439 5319631 complement(288537..289505) 1 NC_009621.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMa2383 probable oxidoreductase; alcohol dehydrogenase 289505 5319631 Smed_5329 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001314034.1 288537 R 366394 CDS YP_001314035.1 150377440 5319632 complement(289588..290154) 1 NC_009621.1 PFAM: regulatory protein TetR; KEGG: sme:SMa2381 hypothetical protein; TetR family transcriptional regulator 290154 5319632 Smed_5330 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001314035.1 289588 R 366394 CDS YP_001314036.1 150377441 5319633 290410..292599 1 NC_009621.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: sme:SMa2379 catalase/peroxidase; catalase/peroxidase HPI 292599 5319633 Smed_5331 Sinorhizobium medicae WSM419 catalase/peroxidase HPI YP_001314036.1 290410 D 366394 CDS YP_001314037.1 150377442 5319634 complement(292690..293871) 1 NC_009621.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa2377 putative transmembrane transport protein; major facilitator transporter 293871 5319634 Smed_5332 Sinorhizobium medicae WSM419 major facilitator transporter YP_001314037.1 292690 R 366394 CDS YP_001314038.1 150377443 5319635 complement(293945..295243) 1 NC_009621.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 295243 5319635 Smed_5333 Sinorhizobium medicae WSM419 cytosine deaminase YP_001314038.1 293945 R 366394 CDS YP_001314039.1 150377444 5319636 complement(295267..296211) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa2369 putative ABC transporter, permease; inner-membrane translocator 296211 5319636 Smed_5334 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314039.1 295267 R 366394 CDS YP_001314040.1 150377445 5319637 complement(296208..297257) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa2367 putative ABC transporter, permease; inner-membrane translocator 297257 5319637 Smed_5335 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314040.1 296208 R 366394 CDS YP_001314041.1 150377446 5319638 complement(297247..298773) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa2365 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 298773 5319638 Smed_5336 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314041.1 297247 R 366394 CDS YP_001314042.1 150377447 5319639 complement(298770..300185) 1 NC_009621.1 PFAM: Amidase; KEGG: sme:SMa2363 putative amidase; amidase 300185 5319639 Smed_5337 Sinorhizobium medicae WSM419 amidase YP_001314042.1 298770 R 366394 CDS YP_001314043.1 150377448 5319640 complement(300197..301180) 1 NC_009621.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMa2361 hypothetical protein; basic membrane lipoprotein 301180 5319640 Smed_5338 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001314043.1 300197 R 366394 CDS YP_001314044.1 150377449 5319641 complement(301281..302594) 1 NC_009621.1 PFAM: aminotransferase class-III; KEGG: sme:SMc02413 putative aminotransferase protein; class III aminotransferase 302594 5319641 Smed_5339 Sinorhizobium medicae WSM419 class III aminotransferase YP_001314044.1 301281 R 366394 CDS YP_001314045.1 150377450 5319642 complement(302608..303276) 1 NC_009621.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMc02412 hypothetical protein; isochorismatase hydrolase 303276 5319642 Smed_5340 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001314045.1 302608 R 366394 CDS YP_001314046.1 150377451 5319643 complement(303273..304301) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02360 putative branched chain amino acid transport system permease ABC transporter protein; inner-membrane translocator 304301 5319643 Smed_5341 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314046.1 303273 R 366394 CDS YP_001314047.1 150377452 5319644 complement(304314..305204) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02359 putative high-affinity branched-chain amino acid transport permease ABC transporter protein; inner-membrane translocator 305204 5319644 Smed_5342 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314047.1 304314 R 366394 CDS YP_001314048.1 150377453 5319645 complement(305208..305915) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02358 putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein; ABC transporter-like protein 305915 5319645 Smed_5343 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314048.1 305208 R 366394 CDS YP_001314049.1 150377454 5319646 complement(305908..306642) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02357 putative high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein; ABC transporter-like protein 306642 5319646 Smed_5344 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314049.1 305908 R 366394 CDS YP_001314050.1 150377455 5319647 complement(306693..307865) 1 NC_009621.1 PFAM: Extracellular ligand-binding receptor; KEGG: sme:SMc02356 putative branched chain amino acid binding periplasmic ABC transporter protein; extracellular ligand-binding receptor 307865 5319647 Smed_5345 Sinorhizobium medicae WSM419 extracellular ligand-binding receptor YP_001314050.1 306693 R 366394 CDS YP_001314051.1 150377456 5319648 complement(307992..308645) 1 NC_009621.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMc02355 hypothetical protein; isochorismatase hydrolase 308645 5319648 Smed_5346 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001314051.1 307992 R 366394 CDS YP_001314052.1 150377457 5319649 complement(308632..309447) 1 NC_009621.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sme:SMc02354 hypothetical protein; N-formylglutamate amidohydrolase 309447 5319649 Smed_5347 Sinorhizobium medicae WSM419 N-formylglutamate amidohydrolase YP_001314052.1 308632 R 366394 CDS YP_001314053.1 150377458 5319650 309602..310501 1 NC_009621.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMc02353 hypothetical protein; RpiR family transcriptional regulator 310501 5319650 Smed_5348 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001314053.1 309602 D 366394 CDS YP_001314054.1 150377459 5319651 310491..311804 1 NC_009621.1 PFAM: glutamine synthetase catalytic region; KEGG: sme:SMc02352 putative glutamine synthetase protein; glutamine synthetase catalytic region 311804 5319651 Smed_5349 Sinorhizobium medicae WSM419 glutamine synthetase catalytic region YP_001314054.1 310491 D 366394 CDS YP_001314055.1 150377460 5319652 complement(311872..312315) 1 NC_009621.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 312315 5319652 Smed_5350 Sinorhizobium medicae WSM419 methionine sulfoxide reductase B YP_001314055.1 311872 R 366394 CDS YP_001314056.1 150377461 5319653 312488..313762 1 NC_009621.1 PFAM: sodium/hydrogen exchanger; KEGG: rru:Rru_A1350 sodium/hydrogen exchanger; sodium/hydrogen exchanger 313762 5319653 Smed_5351 Sinorhizobium medicae WSM419 sodium/hydrogen exchanger YP_001314056.1 312488 D 366394 CDS YP_001314057.1 150377462 5319654 complement(313859..314596) 1 NC_009621.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMa2357 putative adenylate cyclase; putative adenylate/guanylate cyclase 314596 5319654 Smed_5352 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001314057.1 313859 R 366394 CDS YP_001314058.1 150377463 5319655 complement(316485..317621) 1 NC_009621.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 317621 5319655 Smed_5353 Sinorhizobium medicae WSM419 DNA polymerase IV YP_001314058.1 316485 R 366394 CDS YP_001314059.1 150377464 5319656 complement(317774..319972) 1 NC_009621.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMa2353 probable oxidoreductase; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 319972 5319656 Smed_5354 Sinorhizobium medicae WSM419 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_001314059.1 317774 R 366394 CDS YP_001314060.1 150377465 5319658 complement(320923..321558) 1 NC_009621.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMa2349 probable oxidoreductase; putative xanthine dehydrogenase iron-sulfur-binding subunit 321558 5319658 Smed_5356 Sinorhizobium medicae WSM419 putative xanthine dehydrogenase iron-sulfur-binding subunit YP_001314060.1 320923 R 366394 CDS YP_001314061.1 150377466 5319659 321820..322029 1 NC_009621.1 KEGG: sme:SMa2335 hypothetical protein; hypothetical protein 322029 5319659 Smed_5357 Sinorhizobium medicae WSM419 hypothetical protein YP_001314061.1 321820 D 366394 CDS YP_001314062.1 150377467 5319660 322150..323859 1 NC_009621.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 323859 5319660 Smed_5358 Sinorhizobium medicae WSM419 potassium-transporting ATPase subunit A YP_001314062.1 322150 D 366394 CDS YP_001314063.1 150377468 5319661 323871..325913 1 NC_009621.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 325913 5319661 Smed_5359 Sinorhizobium medicae WSM419 potassium-transporting ATPase subunit B YP_001314063.1 323871 D 366394 CDS YP_001314064.1 150377469 5319662 325916..326485 1 NC_009621.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 326485 5319662 Smed_5360 Sinorhizobium medicae WSM419 potassium-transporting ATPase subunit C YP_001314064.1 325916 D 366394 CDS YP_001314065.1 150377470 5319663 326504..329197 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: sme:SMa2327 probable sensor protein; osmosensitive K+ channel signal transduction histidine kinase 329197 5319663 Smed_5361 Sinorhizobium medicae WSM419 osmosensitive K+ channel signal transduction histidine kinase YP_001314065.1 326504 D 366394 CDS YP_001314066.1 150377471 5319664 329194..329886 1 NC_009621.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMa2325 probable transcriptional regulator; two component transcriptional regulator 329886 5319664 Smed_5362 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001314066.1 329194 D 366394 CDS YP_001314067.1 150377472 5319665 330105..330878 1 NC_009621.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMa2359 hypothetical protein; hypothetical protein 330878 5319665 Smed_5363 Sinorhizobium medicae WSM419 hypothetical protein YP_001314067.1 330105 D 366394 CDS YP_001314068.1 150377473 5319666 complement(330875..332026) 1 NC_009621.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: sme:SMc02600 CBS domain-containing membrane protein; hypothetical protein 332026 5319666 Smed_5364 Sinorhizobium medicae WSM419 hypothetical protein YP_001314068.1 330875 R 366394 CDS YP_001314069.1 150377474 5319667 332196..332489 1 NC_009621.1 KEGG: sme:SMc02602 hypothetical protein; hypothetical protein 332489 5319667 Smed_5365 Sinorhizobium medicae WSM419 hypothetical protein YP_001314069.1 332196 D 366394 CDS YP_001314070.1 150377475 5319668 complement(332520..332792) 1 NC_009621.1 KEGG: sme:SMb20545 hypothetical protein; hypothetical protein 332792 5319668 Smed_5366 Sinorhizobium medicae WSM419 hypothetical protein YP_001314070.1 332520 R 366394 CDS YP_001314071.1 150377476 5319669 complement(333016..334749) 1 NC_009621.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: sme:SMa2295 probable penicillin-binding protein; peptidoglycan glycosyltransferase 334749 5319669 Smed_5367 Sinorhizobium medicae WSM419 peptidoglycan glycosyltransferase YP_001314071.1 333016 R 366394 CDS YP_001314072.1 150377477 5319671 337422..338306 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa2293 probable beta lactamase transcriptional activator; LysR family transcriptional regulator 338306 5319671 Smed_5369 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314072.1 337422 D 366394 CDS YP_001314073.1 150377478 5319672 338535..338681 1 NC_009621.1 PFAM: protein of unknown function DUF1127; KEGG: ret:RHE_PE00401 hypothetical protein; hypothetical protein 338681 5319672 Smed_5370 Sinorhizobium medicae WSM419 hypothetical protein YP_001314073.1 338535 D 366394 CDS YP_001314074.1 150377479 5319673 complement(339017..339226) 1 NC_009621.1 KEGG: sme:SMc02277 hypothetical unknown protein; hypothetical protein 339226 5319673 Smed_5371 Sinorhizobium medicae WSM419 hypothetical protein YP_001314074.1 339017 R 366394 CDS YP_001314075.1 150377480 5319674 complement(339285..340004) 1 NC_009621.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: sme:SMc02594 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 340004 5319674 Smed_5372 Sinorhizobium medicae WSM419 5-formyltetrahydrofolate cyclo-ligase YP_001314075.1 339285 R 366394 CDS YP_001314076.1 150377481 5319675 complement(340371..341213) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_3233 transcriptional regulator, LysR family; LysR family transcriptional regulator 341213 5319675 Smed_5373 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314076.1 340371 R 366394 CDS YP_001314077.1 150377482 5319677 341930..342550 1 NC_009621.1 PFAM: autoinducer synthesis protein; KEGG: ret:RHE_PA00179 autoinducer synthesis protein I; putative autoinducer synthesis protein 342550 5319677 Smed_5375 Sinorhizobium medicae WSM419 putative autoinducer synthesis protein YP_001314077.1 341930 D 366394 CDS YP_001314078.1 150377483 5319678 342561..343538 1 NC_009621.1 VirB11 family protein; ATPase; conjugal transfer protein TrbB 343538 5319678 Smed_5376 Sinorhizobium medicae WSM419 conjugal transfer protein TrbB YP_001314078.1 342561 D 366394 CDS YP_001314079.1 150377484 5319679 343528..343908 1 NC_009621.1 PFAM: Conjugal transfer protein TrbC; KEGG: ret:RHE_PA00177 conjugal transfer protein C; conjugal transfer protein TrbC 343908 5319679 Smed_5377 Sinorhizobium medicae WSM419 conjugal transfer protein TrbC YP_001314079.1 343528 D 366394 CDS YP_001314080.1 150377485 5319680 343901..344197 1 NC_009621.1 PFAM: Conjugal transfer TrbD family protein; KEGG: ret:RHE_PA00176 conjugal transfer protein D; conjugal transfer protein TrbD 344197 5319680 Smed_5378 Sinorhizobium medicae WSM419 conjugal transfer protein TrbD YP_001314080.1 343901 D 366394 CDS YP_001314081.1 150377486 5319681 344208..346661 1 NC_009621.1 type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 346661 5319681 Smed_5379 Sinorhizobium medicae WSM419 conjugal transfer protein TrbE YP_001314081.1 344208 D 366394 CDS YP_001314082.1 150377487 5319682 346636..347436 1 NC_009621.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: ret:RHE_PA00174 conjugal transfer protein J; conjugal transfer protein TrbJ 347436 5319682 Smed_5380 Sinorhizobium medicae WSM419 conjugal transfer protein TrbJ YP_001314082.1 346636 D 366394 CDS YP_001314083.1 150377488 5319683 347433..347633 1 NC_009621.1 hypothetical protein 347633 5319683 Smed_5381 Sinorhizobium medicae WSM419 hypothetical protein YP_001314083.1 347433 D 366394 CDS YP_001314084.1 150377489 5319684 347627..348835 1 NC_009621.1 TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: ret:RHE_PA00173 conjugal transfer protein L; conjugal transfer protein TrbL 348835 5319684 Smed_5382 Sinorhizobium medicae WSM419 conjugal transfer protein TrbL YP_001314084.1 347627 D 366394 CDS YP_001314085.1 150377490 5319685 348813..349475 1 NC_009621.1 PFAM: Conjugal transfer protein; KEGG: ret:RHE_PA00172 conjugal transfer protein F; conjugal transfer protein TrbF 349475 5319685 Smed_5383 Sinorhizobium medicae WSM419 conjugal transfer protein TrbF YP_001314085.1 348813 D 366394 CDS YP_001314086.1 150377491 5319686 349492..350304 1 NC_009621.1 TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: ret:RHE_PA00171 conjugal transfer protein G; conjugal transfer protein TrbG 350304 5319686 Smed_5384 Sinorhizobium medicae WSM419 conjugal transfer protein TrbG YP_001314086.1 349492 D 366394 CDS YP_001314087.1 150377492 5319687 350308..350748 1 NC_009621.1 KEGG: ret:RHE_PA00170 conjugal transfer protein H; conjugal transfer protein TrbH 350748 5319687 Smed_5385 Sinorhizobium medicae WSM419 conjugal transfer protein TrbH YP_001314087.1 350308 D 366394 CDS YP_001314088.1 150377493 5319688 350761..352053 1 NC_009621.1 PFAM: conjugation TrbI family protein; KEGG: ret:RHE_PA00169 conjugal transfer protein I; conjugal transfer protein TrbI 352053 5319688 Smed_5386 Sinorhizobium medicae WSM419 conjugal transfer protein TrbI YP_001314088.1 350761 D 366394 CDS YP_001314089.1 150377494 5319689 352053..353015 1 NC_009621.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: ret:RHE_PA00167 conjugal transfer transcriptional regulator protein, LuxR family; autoinducer-binding domain-containing protein 353015 5319689 Smed_5387 Sinorhizobium medicae WSM419 autoinducer-binding domain-containing protein YP_001314089.1 352053 D 366394 CDS YP_001314090.1 150377495 5319690 complement(353019..353342) 1 NC_009621.1 KEGG: ret:RHE_PA00166 conjugal transfer transcriptional regulator (repressor) protein; conjugal transfer transcriptional regulator (repressor) protein 353342 5319690 Smed_5388 Sinorhizobium medicae WSM419 conjugal transfer transcriptional regulator (repressor) protein YP_001314090.1 353019 R 366394 CDS YP_001314091.1 150377496 5319691 353561..353773 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: bja:bsr0055 probable transcriptional regulator; XRE family transcriptional regulator 353773 5319691 Smed_5389 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314091.1 353561 D 366394 CDS YP_001314092.1 150377497 5319693 complement(354563..355726) 1 NC_009621.1 PFAM: TraB family protein; KEGG: ret:RHE_PA00161 conjugal transfer protein B; conjugal transfer protein TraB 355726 5319693 Smed_5391 Sinorhizobium medicae WSM419 conjugal transfer protein TraB YP_001314092.1 354563 R 366394 CDS YP_001314093.1 150377498 5319694 complement(355716..356282) 1 NC_009621.1 TIGRFAM: Peptidase S26C conjugative transfer signal peptidase TraF; KEGG: ret:RHE_PA00160 conjugal transfer protein F; conjugal transfer pilin processing protease TraF 356282 5319694 Smed_5392 Sinorhizobium medicae WSM419 conjugal transfer pilin processing protease TraF YP_001314093.1 355716 R 366394 CDS YP_001314094.1 150377499 5319695 complement(356279..359587) 1 NC_009621.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 359587 5319695 Smed_5393 Sinorhizobium medicae WSM419 Dtr system oriT relaxase YP_001314094.1 356279 R 366394 CDS YP_001314095.1 150377500 5319696 359842..360138 1 NC_009621.1 PFAM: TraC family protein; KEGG: ret:RHE_PA00158 conjugal transfer protein C; conjugal transfer protein TraC 360138 5319696 Smed_5394 Sinorhizobium medicae WSM419 conjugal transfer protein TraC YP_001314095.1 359842 D 366394 CDS YP_001314096.1 150377501 5319697 360143..360358 1 NC_009621.1 PFAM: Conjugal transfer TraD family protein; KEGG: rle:pRL70084 putative conjugal transfer protein; conjugal transfer protein TraD 360358 5319697 Smed_5395 Sinorhizobium medicae WSM419 conjugal transfer protein TraD YP_001314096.1 360143 D 366394 CDS YP_001314097.1 150377502 5319698 360345..362264 1 NC_009621.1 VirD4 family; conjugal transfer coupling protein TraG 362264 5319698 Smed_5396 Sinorhizobium medicae WSM419 conjugal transfer coupling protein TraG YP_001314097.1 360345 D 366394 CDS YP_001314098.1 150377503 5319699 complement(362653..363564) 1 NC_009621.1 KEGG: mxa:MXAN_0377 hypothetical protein; hypothetical protein 363564 5319699 Smed_5397 Sinorhizobium medicae WSM419 hypothetical protein YP_001314098.1 362653 R 366394 CDS YP_001314099.1 150377504 5319700 363688..364155 1 NC_009621.1 PFAM: WGR domain protein; KEGG: rle:pRL70021 hypothetical protein; WGR domain-containing protein 364155 5319700 Smed_5398 Sinorhizobium medicae WSM419 WGR domain-containing protein YP_001314099.1 363688 D 366394 CDS YP_001314100.1 150377505 5319701 complement(364442..364753) 1 NC_009621.1 PFAM: protein of unknown function DUF736; KEGG: rle:pRL80113 hypothetical protein; hypothetical protein 364753 5319701 Smed_5399 Sinorhizobium medicae WSM419 hypothetical protein YP_001314100.1 364442 R 366394 CDS YP_001314101.1 150377506 5319704 365939..366163 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: hne:HNE_0784 DNA-binding protein; XRE family transcriptional regulator 366163 5319704 Smed_5402 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314101.1 365939 D 366394 CDS YP_001314102.1 150377507 5319706 complement(366745..368478) 1 NC_009621.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: pde:Pden_2612 sulphate transporter; sulfate transporter 368478 5319706 Smed_5404 Sinorhizobium medicae WSM419 sulfate transporter YP_001314102.1 366745 R 366394 CDS YP_001314103.1 150377508 5319707 complement(368551..368811) 1 NC_009621.1 KEGG: pde:Pden_2611 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 368811 5319707 Smed_5405 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314103.1 368551 R 366394 CDS YP_001314104.1 150377509 5319708 369069..370214 1 NC_009621.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sus:Acid_7643 phage integrase family protein; phage integrase family protein 370214 5319708 Smed_5406 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314104.1 369069 D 366394 CDS YP_001314105.1 150377510 5319709 370285..371223 1 NC_009621.1 PFAM: phage integrase family protein; KEGG: rme:Rmet_1272 phage integrase; phage integrase family protein 371223 5319709 Smed_5407 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314105.1 370285 D 366394 CDS YP_001314106.1 150377511 5319710 371220..372212 1 NC_009621.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mlo:mll6042 integrase/recombinase; phage integrase family protein 372212 5319710 Smed_5408 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314106.1 371220 D 366394 CDS YP_001314107.1 150377512 5319711 complement(372115..372897) 1 NC_009621.1 PFAM: domain of unknown function DUF1738; KEGG: nha:Nham_0574 antirestriction protein; hypothetical protein 372897 5319711 Smed_5409 Sinorhizobium medicae WSM419 hypothetical protein YP_001314107.1 372115 R 366394 CDS YP_001314108.1 150377513 5319712 373301..373543 1 NC_009621.1 hypothetical protein 373543 5319712 Smed_5410 Sinorhizobium medicae WSM419 hypothetical protein YP_001314108.1 373301 D 366394 CDS YP_001314109.1 150377514 5319713 complement(373928..375172) 1 NC_009621.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 375172 5319713 Smed_5411 Sinorhizobium medicae WSM419 peptidase T YP_001314109.1 373928 R 366394 CDS YP_001314110.1 150377515 5319714 complement(375289..376527) 1 NC_009621.1 possibly related to processing of cell wall amino acids; KEGG: sme:SMb21041 conserved putative protein, possibly related to processing of cell wall amino acids; hypothetical protein 376527 5319714 Smed_5412 Sinorhizobium medicae WSM419 hypothetical protein YP_001314110.1 375289 R 366394 CDS YP_001314111.1 150377516 5319715 complement(376615..378288) 1 NC_009621.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMb21040 putative oligopeptidemurein peptide ABC transporter ATP-binding protein; ABC transporter-like protein 378288 5319715 Smed_5413 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314111.1 376615 R 366394 CDS YP_001314112.1 150377517 5319716 complement(378285..379172) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21039 putative oligopeptidemurein peptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 379172 5319716 Smed_5414 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314112.1 378285 R 366394 CDS YP_001314113.1 150377518 5319717 complement(379187..380161) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21038 putative oligopeptidemurein peptide ABC transporter permease protein; binding-protein-dependent transport systems inner membrane component 380161 5319717 Smed_5415 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314113.1 379187 R 366394 CDS YP_001314114.1 150377519 5319718 complement(380168..381772) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMb21037 putative oligopeptidemurein peptide ABC transporter periplasmic solute-binding protein precursor; extracellular solute-binding protein 381772 5319718 Smed_5416 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314114.1 380168 R 366394 CDS YP_001314115.1 150377520 5319719 381932..382150 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_3368 transcriptional regulator, XRE family; XRE family transcriptional regulator 382150 5319719 Smed_5417 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314115.1 381932 D 366394 CDS YP_001314116.1 150377521 5319720 complement(382208..382786) 1 NC_009621.1 KEGG: sme:SMb21036 hypothetical protein; hypothetical protein 382786 5319720 Smed_5418 Sinorhizobium medicae WSM419 hypothetical protein YP_001314116.1 382208 R 366394 CDS YP_001314117.1 150377522 5319721 382914..383162 1 NC_009621.1 KEGG: bmb:BruAb1_0291 hypothetical protein; hypothetical protein 383162 5319721 Smed_5419 Sinorhizobium medicae WSM419 hypothetical protein YP_001314117.1 382914 D 366394 CDS YP_001314118.1 150377523 5319722 383826..384140 1 NC_009621.1 KEGG: rle:pRL120653 hypothetical protein; hypothetical protein 384140 5319722 Smed_5420 Sinorhizobium medicae WSM419 hypothetical protein YP_001314118.1 383826 D 366394 CDS YP_001314119.1 150377524 5319723 384289..384495 1 NC_009621.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:RL0595 putative cold shock protein; cold-shock DNA-binding domain-containing protein 384495 5319723 Smed_5421 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001314119.1 384289 D 366394 CDS YP_001314120.1 150377525 5319724 384554..384877 1 NC_009621.1 hypothetical protein 384877 5319724 Smed_5422 Sinorhizobium medicae WSM419 hypothetical protein YP_001314120.1 384554 D 366394 CDS YP_001314121.1 150377526 5319725 384891..385322 1 NC_009621.1 KEGG: mlo:mlr9078 hypothetical protein; hypothetical protein 385322 5319725 Smed_5423 Sinorhizobium medicae WSM419 hypothetical protein YP_001314121.1 384891 D 366394 CDS YP_001314122.1 150377527 5319726 385319..385801 1 NC_009621.1 PFAM: RES domain protein; KEGG: sme:SMa2279 hypothetical protein; RES domain-containing protein 385801 5319726 Smed_5424 Sinorhizobium medicae WSM419 RES domain-containing protein YP_001314122.1 385319 D 366394 CDS YP_001314123.1 150377528 5319727 386034..386336 1 NC_009621.1 KEGG: sme:SMa2259 hypothetical protein; hypothetical protein 386336 5319727 Smed_5425 Sinorhizobium medicae WSM419 hypothetical protein YP_001314123.1 386034 D 366394 CDS YP_001314124.1 150377529 5319729 387359..387652 1 NC_009621.1 hypothetical protein 387652 5319729 Smed_5427 Sinorhizobium medicae WSM419 hypothetical protein YP_001314124.1 387359 D 366394 CDS YP_001314125.1 150377530 5319730 387846..388103 1 NC_009621.1 KEGG: rme:Rmet_2595 hypothetical protein; hypothetical protein 388103 5319730 Smed_5428 Sinorhizobium medicae WSM419 hypothetical protein YP_001314125.1 387846 D 366394 CDS YP_001314126.1 150377531 5319731 complement(388145..388363) 1 NC_009621.1 hypothetical protein 388363 5319731 Smed_5429 Sinorhizobium medicae WSM419 hypothetical protein YP_001314126.1 388145 R 366394 CDS YP_001314127.1 150377532 5319733 complement(389181..390356) 1 NC_009621.1 PFAM: phage integrase family protein; KEGG: sme:SMa2257 possible integrase-like protein; phage integrase family protein 390356 5319733 Smed_5431 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314127.1 389181 R 366394 CDS YP_001314128.1 150377533 5319734 complement(390448..390849) 1 NC_009621.1 PFAM: PilT protein domain protein; KEGG: nha:Nham_4577 PilT protein-like; PilT domain-containing protein 390849 5319734 Smed_5432 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001314128.1 390448 R 366394 CDS YP_001314129.1 150377534 5319735 complement(390846..391187) 1 NC_009621.1 KEGG: mlo:msl5079 hypothetical protein; hypothetical protein 391187 5319735 Smed_5433 Sinorhizobium medicae WSM419 hypothetical protein YP_001314129.1 390846 R 366394 CDS YP_001314130.1 150377535 5319736 391471..392139 1 NC_009621.1 KEGG: azo:azo1600 conserved hypothetical protein; hypothetical protein 392139 5319736 Smed_5434 Sinorhizobium medicae WSM419 hypothetical protein YP_001314130.1 391471 D 366394 CDS YP_001314131.1 150377536 5319738 393468..395591 1 NC_009621.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tbd:Tbd_1491 adenine specific DNA-methyltransferase; adenine-specific DNA-methyltransferase 395591 5319738 Smed_5436 Sinorhizobium medicae WSM419 adenine-specific DNA-methyltransferase YP_001314131.1 393468 D 366394 CDS YP_001314132.1 150377537 5319739 395591..398272 1 NC_009621.1 PFAM: type III restriction protein res subunit; KEGG: tbd:Tbd_1492 type III restriction-modification enzyme helicase subunit; type III restriction protein res subunit 398272 5319739 Smed_5437 Sinorhizobium medicae WSM419 type III restriction protein res subunit YP_001314132.1 395591 D 366394 CDS YP_001314133.1 150377538 5319740 complement(399088..399969) 1 NC_009621.1 KEGG: sco:SCO3291 regulatory protein; hypothetical protein 399969 5319740 Smed_5438 Sinorhizobium medicae WSM419 hypothetical protein YP_001314133.1 399088 R 366394 CDS YP_001314134.1 150377539 5319741 complement(399972..400472) 1 NC_009621.1 KEGG: bba:Bd1459 hypothetical protein; hypothetical protein 400472 5319741 Smed_5439 Sinorhizobium medicae WSM419 hypothetical protein YP_001314134.1 399972 R 366394 CDS YP_001314135.1 150377540 5319742 complement(400856..404011) 1 NC_009621.1 PFAM: UvrD/REP helicase; KEGG: ade:Adeh_2512 UvrD/REP helicase; UvrD/REP helicase 404011 5319742 Smed_5440 Sinorhizobium medicae WSM419 UvrD/REP helicase YP_001314135.1 400856 R 366394 CDS YP_001314136.1 150377541 5319743 complement(404004..406565) 1 NC_009621.1 hypothetical protein 406565 5319743 Smed_5441 Sinorhizobium medicae WSM419 hypothetical protein YP_001314136.1 404004 R 366394 CDS YP_001314137.1 150377542 5319744 complement(406638..407618) 1 NC_009621.1 KEGG: mmr:Mmar10_1479 transcriptional regulator; transcriptional regulator 407618 5319744 Smed_5442 Sinorhizobium medicae WSM419 transcriptional regulator YP_001314137.1 406638 R 366394 CDS YP_001314138.1 150377543 5319745 408066..408662 1 NC_009621.1 KEGG: nar:Saro_0348 hypothetical protein; hypothetical protein 408662 5319745 Smed_5443 Sinorhizobium medicae WSM419 hypothetical protein YP_001314138.1 408066 D 366394 CDS YP_001314139.1 150377544 5319746 408809..409774 1 NC_009621.1 hypothetical protein 409774 5319746 Smed_5444 Sinorhizobium medicae WSM419 hypothetical protein YP_001314139.1 408809 D 366394 CDS YP_001314140.1 150377545 5319747 complement(join(410479..411081,411081..411425)) 1 NC_009621.1 KEGG: nha:Nham_4172 ISSpo6, transposase orf A; transposase 411425 5319747 Smed_5445 Sinorhizobium medicae WSM419 transposase YP_001314140.1 410479 R 366394 CDS YP_001314141.1 150377546 5319748 411517..411843 1 NC_009621.1 KEGG: ade:Adeh_3543 hypothetical protein; hypothetical protein 411843 5319748 Smed_5446 Sinorhizobium medicae WSM419 hypothetical protein YP_001314141.1 411517 D 366394 CDS YP_001314142.1 150377547 5319749 412019..412495 1 NC_009621.1 hypothetical protein 412495 5319749 Smed_5447 Sinorhizobium medicae WSM419 hypothetical protein YP_001314142.1 412019 D 366394 CDS YP_001314143.1 150377548 5319750 complement(412907..414796) 1 NC_009621.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR_2 repeat protein; KEGG: sme:SMa0570 putative CyaF4 adenylate cyclase; adenylyl cyclase class-3/4/guanylyl cyclase 414796 5319750 Smed_5448 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001314143.1 412907 R 366394 CDS YP_001314144.1 150377549 5319751 complement(415102..415920) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMa1727 putative hydrolase; alpha/beta hydrolase fold protein 415920 5319751 Smed_5449 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001314144.1 415102 R 366394 CDS YP_001314145.1 150377550 5319753 complement(416697..418307) 1 NC_009621.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: mlo:mll9026 transposase; transposase IS204/IS1001/IS1096/IS1165 family protein 418307 5319753 Smed_5451 Sinorhizobium medicae WSM419 transposase IS204/IS1001/IS1096/IS1165 family protein YP_001314145.1 416697 R 366394 CDS YP_001314146.1 150377551 5319754 418446..419801 1 NC_009621.1 hypothetical protein 419801 5319754 Smed_5452 Sinorhizobium medicae WSM419 hypothetical protein YP_001314146.1 418446 D 366394 CDS YP_001314147.1 150377552 5319755 419996..420613 1 NC_009621.1 KEGG: bja:bll1928 hypothetical protein; hypothetical protein 420613 5319755 Smed_5453 Sinorhizobium medicae WSM419 hypothetical protein YP_001314147.1 419996 D 366394 CDS YP_001314148.1 150377553 5319756 420606..421475 1 NC_009621.1 PFAM: Domain of unknown function DUF1814; KEGG: bja:bll1927 hypothetical protein; hypothetical protein 421475 5319756 Smed_5454 Sinorhizobium medicae WSM419 hypothetical protein YP_001314148.1 420606 D 366394 CDS YP_001314149.1 150377554 5319757 complement(421566..422507) 1 NC_009621.1 PFAM: PfkB domain protein; KEGG: bsu:BG13998 similar to opine catabolism protein; ribokinase-like domain-containing protein 422507 5319757 Smed_5455 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001314149.1 421566 R 366394 CDS YP_001314150.1 150377555 5319758 complement(422750..423856) 1 NC_009621.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rsp:RSP_3939 transcriptional regulator, LacI family; alanine racemase 423856 5319758 Smed_5456 Sinorhizobium medicae WSM419 alanine racemase YP_001314150.1 422750 R 366394 CDS YP_001314151.1 150377556 5319759 424100..424945 1 NC_009621.1 PFAM: extracellular solute-binding protein family 3; KEGG: fal:FRAAL5986 putative arginine transport protein (ABC superfamily, peri_bind); extracellular solute-binding protein 424945 5319759 Smed_5457 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314151.1 424100 D 366394 CDS YP_001314152.1 150377557 5319760 425015..425938 1 NC_009621.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 ABC polar amino acid family transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 425938 5319760 Smed_5458 Sinorhizobium medicae WSM419 polar amino acid ABC transporter, inner membrane subunit YP_001314152.1 425015 D 366394 CDS YP_001314153.1 150377558 5319761 425935..426726 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa18910 putative ABC transporter ATP-binding protein; ABC transporter-like protein 426726 5319761 Smed_5459 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314153.1 425935 D 366394 CDS YP_001314154.1 150377559 5319762 complement(426731..427669) 1 NC_009621.1 PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: mlo:mlr3204 ornithine cyclodeaminase; ornithine cyclodeaminase/mu-crystallin 427669 5319762 Smed_5460 Sinorhizobium medicae WSM419 ornithine cyclodeaminase/mu-crystallin YP_001314154.1 426731 R 366394 CDS YP_001314155.1 150377560 5319763 complement(427680..428390) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: bsu:BG13997 similar to transcriptional regulator (GntR family); GntR family transcriptional regulator 428390 5319763 Smed_5461 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314155.1 427680 R 366394 CDS YP_001314156.1 150377561 5319764 complement(428409..429410) 1 NC_009621.1 PFAM: sugar isomerase (SIS); KEGG: bsu:BG14002 similar to opine catabolism protein; sugar isomerase (SIS) 429410 5319764 Smed_5462 Sinorhizobium medicae WSM419 sugar isomerase (SIS) YP_001314156.1 428409 R 366394 CDS YP_001314157.1 150377562 5319765 429476..431041 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; KEGG: pde:Pden_1191 FAD dependent oxidoreductase; FAD dependent oxidoreductase 431041 5319765 Smed_5463 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314157.1 429476 D 366394 CDS YP_001314158.1 150377563 5319766 431141..431980 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: cac:CAC3499 predicted endonuclease; xylose isomerase domain-containing protein 431980 5319766 Smed_5464 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314158.1 431141 D 366394 CDS YP_001314159.1 150377564 5319767 431997..434069 1 NC_009621.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pde:Pden_4951 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase/NADH oxidase 434069 5319767 Smed_5465 Sinorhizobium medicae WSM419 NADH:flavin oxidoreductase/NADH oxidase YP_001314159.1 431997 D 366394 CDS YP_001314160.1 150377565 5319768 434586..434783 1 NC_009621.1 hypothetical protein 434783 5319768 Smed_5466 Sinorhizobium medicae WSM419 hypothetical protein YP_001314160.1 434586 D 366394 CDS YP_001314161.1 150377566 5319770 435582..437003 1 NC_009621.1 PFAM: FAD linked oxidase domain protein; KEGG: reh:H16_B1827 FAD/FMN-containing dehydrogenase; FAD linked oxidase domain-containing protein 437003 5319770 Smed_5468 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001314161.1 435582 D 366394 CDS YP_001314162.1 150377567 5319771 437084..438169 1 NC_009621.1 PFAM: extracellular solute-binding protein family 1; KEGG: reh:H16_B1828 ABC-type transporter, periplasmic component: POPT family; extracellular solute-binding protein 438169 5319771 Smed_5469 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314162.1 437084 D 366394 CDS YP_001314163.1 150377568 5319772 438231..439325 1 NC_009621.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: reh:H16_B1829 ABC-type transporter, ATPase component: POPT family; spermidine/putrescine ABC transporter ATPase subunit 439325 5319772 Smed_5470 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase subunit YP_001314163.1 438231 D 366394 CDS YP_001314164.1 150377569 5319773 439329..441095 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1830 ABC-type transporter, duplicated permease domains; binding-protein-dependent transport systems inner membrane component 441095 5319773 Smed_5471 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314164.1 439329 D 366394 CDS YP_001314165.1 150377570 5319774 441133..442053 1 NC_009621.1 PFAM: dihydrodipicolinate synthetase; KEGG: bbr:BB1108 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 442053 5319774 Smed_5472 Sinorhizobium medicae WSM419 dihydrodipicolinate synthetase YP_001314165.1 441133 D 366394 CDS YP_001314166.1 150377571 5319775 442155..442988 1 NC_009621.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: reh:H16_B1833 transcriptional regulator, IclR-family; regulatory protein IclR 442988 5319775 Smed_5473 Sinorhizobium medicae WSM419 regulatory protein IclR YP_001314166.1 442155 D 366394 CDS YP_001314167.1 150377572 5319776 443022..443843 1 NC_009621.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 443843 5319776 Smed_5474 Sinorhizobium medicae WSM419 pyrroline-5-carboxylate reductase YP_001314167.1 443022 D 366394 CDS YP_001314168.1 150377573 5319777 443930..445120 1 NC_009621.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pde:Pden_4877 L-lactate dehydrogenase (cytochrome); L-lactate dehydrogenase (cytochrome) 445120 5319777 Smed_5475 Sinorhizobium medicae WSM419 L-lactate dehydrogenase (cytochrome) YP_001314168.1 443930 D 366394 CDS YP_001314169.1 150377574 5319778 complement(445160..445834) 1 NC_009621.1 TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: sme:SMa0483 putative inositol monophosphatase; histidinol-phosphate phosphatase 445834 5319778 Smed_5476 Sinorhizobium medicae WSM419 histidinol-phosphate phosphatase YP_001314169.1 445160 R 366394 CDS YP_001314170.1 150377575 5319781 complement(448255..448554) 1 NC_009621.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: bja:bll3011 virulence-associated protein I; XRE family plasmid maintenance system antidote protein 448554 5319781 Smed_5479 Sinorhizobium medicae WSM419 XRE family plasmid maintenance system antidote protein YP_001314170.1 448255 R 366394 CDS YP_001314171.1 150377576 5319782 complement(448583..448858) 1 NC_009621.1 PFAM: plasmid maintenance system killer; KEGG: hne:HNE_2665 plasmid maintenance system killer protein; plasmid maintenance system killer 448858 5319782 Smed_5480 Sinorhizobium medicae WSM419 plasmid maintenance system killer YP_001314171.1 448583 R 366394 CDS YP_001314172.1 150377577 5319787 451073..451945 1 NC_009621.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: sit:TM1040_3756 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD 451945 5319787 Smed_5485 Sinorhizobium medicae WSM419 formate dehydrogenase family accessory protein FdhD YP_001314172.1 451073 D 366394 CDS YP_001314173.1 150377578 5319788 451938..452561 1 NC_009621.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 452561 mobA 5319788 mobA Sinorhizobium medicae WSM419 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001314173.1 451938 D 366394 CDS YP_001314174.1 150377579 5319789 452638..453921 1 NC_009621.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 453921 5319789 Smed_5487 Sinorhizobium medicae WSM419 molybdopterin biosynthesis protein MoeA YP_001314174.1 452638 D 366394 CDS YP_001314175.1 150377580 5319790 454092..454793 1 NC_009621.1 KEGG: mes:Meso_2452 hypothetical protein; hypothetical protein 454793 5319790 Smed_5488 Sinorhizobium medicae WSM419 hypothetical protein YP_001314175.1 454092 D 366394 CDS YP_001314176.1 150377581 5319791 complement(455306..456331) 1 NC_009621.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mes:Meso_2451 formate dehydrogenase, gamma subunit; formate dehydrogenase, subunit gamma 456331 5319791 Smed_5489 Sinorhizobium medicae WSM419 formate dehydrogenase, subunit gamma YP_001314176.1 455306 R 366394 CDS YP_001314177.1 150377582 5319792 complement(456554..457150) 1 NC_009621.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mes:Meso_2450 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 457150 5319792 Smed_5490 Sinorhizobium medicae WSM419 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001314177.1 456554 R 366394 CDS YP_001314178.1 150377583 5319793 complement(457164..460085) 1 NC_009621.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mes:Meso_2449 twin-arginine translocation pathway signal; molybdopterin oxidoreductase 460085 5319793 Smed_5491 Sinorhizobium medicae WSM419 molybdopterin oxidoreductase YP_001314178.1 457164 R 366394 CDS YP_001314179.1 150377584 5319794 complement(460093..460302) 1 NC_009621.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: mes:Meso_2448 twin-arginine translocation pathway signal; formate dehydrogenase region TAT target 460302 5319794 Smed_5492 Sinorhizobium medicae WSM419 formate dehydrogenase region TAT target YP_001314179.1 460093 R 366394 CDS YP_001314180.1 150377585 5319795 complement(460347..461054) 1 NC_009621.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mes:Meso_2447 cytoplasmic chaperone TorD; cytoplasmic chaperone TorD family protein 461054 5319795 Smed_5493 Sinorhizobium medicae WSM419 cytoplasmic chaperone TorD family protein YP_001314180.1 460347 R 366394 CDS YP_001314181.1 150377586 5319796 complement(461127..461855) 1 NC_009621.1 KEGG: mes:Meso_2446 hypothetical protein; hypothetical protein 461855 5319796 Smed_5494 Sinorhizobium medicae WSM419 hypothetical protein YP_001314181.1 461127 R 366394 CDS YP_001314182.1 150377587 5319797 complement(461848..462366) 1 NC_009621.1 KEGG: mes:Meso_2445 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 462366 5319797 Smed_5495 Sinorhizobium medicae WSM419 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001314182.1 461848 R 366394 CDS YP_001314183.1 150377588 5319798 complement(462377..463393) 1 NC_009621.1 KEGG: mes:Meso_2444 hypothetical protein; hypothetical protein 463393 5319798 Smed_5496 Sinorhizobium medicae WSM419 hypothetical protein YP_001314183.1 462377 R 366394 CDS YP_001314184.1 150377589 5319799 complement(463390..463932) 1 NC_009621.1 KEGG: mes:Meso_2443 hypothetical protein; hypothetical protein 463932 5319799 Smed_5497 Sinorhizobium medicae WSM419 hypothetical protein YP_001314184.1 463390 R 366394 CDS YP_001314185.1 150377590 5319800 complement(463923..464669) 1 NC_009621.1 KEGG: mes:Meso_2442 hypothetical protein; hypothetical protein 464669 5319800 Smed_5498 Sinorhizobium medicae WSM419 hypothetical protein YP_001314185.1 463923 R 366394 CDS YP_001314186.1 150377591 5319801 464775..466814 1 NC_009621.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mes:Meso_2441 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 466814 5319801 Smed_5499 Sinorhizobium medicae WSM419 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001314186.1 464775 D 366394 CDS YP_001314187.1 150377592 5319802 complement(466816..468111) 1 NC_009621.1 PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mes:Meso_2440 WD-40 repeat; cytochrome c class I 468111 5319802 Smed_5500 Sinorhizobium medicae WSM419 cytochrome c class I YP_001314187.1 466816 R 366394 CDS YP_001314188.1 150377593 5319803 468212..468418 1 NC_009621.1 KEGG: mes:Meso_2439 hypothetical protein; hypothetical protein 468418 5319803 Smed_5501 Sinorhizobium medicae WSM419 hypothetical protein YP_001314188.1 468212 D 366394 CDS YP_001314189.1 150377594 5319804 complement(468535..469410) 1 NC_009621.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: mes:Meso_2438 DNA binding domain, excisionase family; DNA binding domain-containing protein 469410 5319804 Smed_5502 Sinorhizobium medicae WSM419 DNA binding domain-containing protein YP_001314189.1 468535 R 366394 CDS YP_001314190.1 150377595 5319805 469468..470193 1 NC_009621.1 KEGG: mes:Meso_2437 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 470193 5319805 Smed_5503 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314190.1 469468 D 366394 CDS YP_001314191.1 150377596 5319806 470195..470917 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_2436 ABC transporter related; ABC transporter-like protein 470917 5319806 Smed_5504 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314191.1 470195 D 366394 CDS YP_001314192.1 150377597 5319807 470939..471763 1 NC_009621.1 KEGG: mes:Meso_2435 extracellular solute-binding protein, family 1; extracellular solute-binding protein 471763 5319807 Smed_5505 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314192.1 470939 D 366394 CDS YP_001314193.1 150377598 5319808 471809..472936 1 NC_009621.1 PFAM: molybdopterin binding domain; MoeA domain protein domain IV; KEGG: mes:Meso_2434 molybdopterin binding domain; molybdopterin binding domain-containing protein 472936 5319808 Smed_5506 Sinorhizobium medicae WSM419 molybdopterin binding domain-containing protein YP_001314193.1 471809 D 366394 CDS YP_001314194.1 150377599 5319809 472946..474895 1 NC_009621.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mes:Meso_2433 molybdenum cofactor synthesis domain; putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 474895 5319809 Smed_5507 Sinorhizobium medicae WSM419 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein YP_001314194.1 472946 D 366394 CDS YP_001314195.1 150377600 5319810 complement(475024..475500) 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A1506 hypothetical protein; helix-turn-helix domain-containing protein 475500 5319810 Smed_5508 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001314195.1 475024 R 366394 CDS YP_001314196.1 150377601 5319812 476541..477299 1 NC_009621.1 KEGG: sme:SMa1597 putative fimbrial chaperone protein; putative fimbrial chaperone protein 477299 5319812 Smed_5510 Sinorhizobium medicae WSM419 putative fimbrial chaperone protein YP_001314196.1 476541 D 366394 CDS YP_001314197.1 150377602 5319813 complement(477820..478383) 1 NC_009621.1 TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein; yecA family protein 478383 5319813 Smed_5511 Sinorhizobium medicae WSM419 yecA family protein YP_001314197.1 477820 R 366394 CDS YP_001314198.1 150377603 5319814 complement(478380..479252) 1 NC_009621.1 PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative; transposase IS66 479252 5319814 Smed_5512 Sinorhizobium medicae WSM419 transposase IS66 YP_001314198.1 478380 R 366394 CDS YP_001314199.1 150377604 5319815 complement(479306..480565) 1 NC_009621.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sme:SMb21045 putative reverse transcriptasematurase protein; RNA-directed DNA polymerase 480565 5319815 Smed_5513 Sinorhizobium medicae WSM419 RNA-directed DNA polymerase YP_001314199.1 479306 R 366394 CDS YP_001314200.1 150377605 5319816 complement(481078..481839) 1 NC_009621.1 PFAM: transposase IS66; KEGG: sme:SMc03280 putative transposase number 3 for insertion sequence ISRM28; transposase IS66 481839 5319816 Smed_5514 Sinorhizobium medicae WSM419 transposase IS66 YP_001314200.1 481078 R 366394 CDS YP_001314201.1 150377606 5319817 complement(481888..482244) 1 NC_009621.1 PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28; IS66 Orf2 family protein 482244 5319817 Smed_5515 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314201.1 481888 R 366394 CDS YP_001314202.1 150377607 5319818 complement(482241..482711) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28; transposase IS3/IS911 family protein 482711 5319818 Smed_5516 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314202.1 482241 R 366394 CDS YP_001314203.1 150377608 5319819 complement(482863..483519) 1 NC_009621.1 PFAM: isochorismatase hydrolase; KEGG: rle:RL1850 putative isochorismatase family protein; isochorismatase hydrolase 483519 5319819 Smed_5517 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001314203.1 482863 R 366394 CDS YP_001314204.1 150377609 5319820 complement(483536..484078) 1 NC_009621.1 KEGG: ret:RHE_PF00543 hypothetical protein; hypothetical protein 484078 5319820 Smed_5518 Sinorhizobium medicae WSM419 hypothetical protein YP_001314204.1 483536 R 366394 CDS YP_001314205.1 150377610 5319821 complement(484148..485440) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: mlo:mlr6682 epoxide hydrolase; epocide hydrolase domain-containing protein 485440 5319821 Smed_5519 Sinorhizobium medicae WSM419 epocide hydrolase domain-containing protein YP_001314205.1 484148 R 366394 CDS YP_001314206.1 150377611 5319823 complement(485753..486115) 1 NC_009621.1 PFAM: response regulator receiver; KEGG: pfo:Pfl_2250 response regulator receiver domain protein (CheY); response regulator receiver protein 486115 5319823 Smed_5521 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314206.1 485753 R 366394 CDS YP_001314207.1 150377612 5319824 complement(486135..488762) 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: pfo:Pfl_2251 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 488762 5319824 Smed_5522 Sinorhizobium medicae WSM419 PAS/PAC sensor signal transduction histidine kinase YP_001314207.1 486135 R 366394 CDS YP_001314208.1 150377613 5319825 complement(488872..489240) 1 NC_009621.1 PFAM: response regulator receiver; KEGG: pfo:Pfl_2250 response regulator receiver domain protein (CheY); response regulator receiver protein 489240 5319825 Smed_5523 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314208.1 488872 R 366394 CDS YP_001314209.1 150377614 5319826 complement(489240..491630) 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: pfo:Pfl_2251 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 491630 5319826 Smed_5524 Sinorhizobium medicae WSM419 PAS/PAC sensor signal transduction histidine kinase YP_001314209.1 489240 R 366394 CDS YP_001314210.1 150377615 5319827 complement(491635..492291) 1 NC_009621.1 KEGG: aba:Acid345_0842 hypothetical protein; hypothetical protein 492291 5319827 Smed_5525 Sinorhizobium medicae WSM419 hypothetical protein YP_001314210.1 491635 R 366394 CDS YP_001314211.1 150377616 5319828 492501..493454 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20211 putative transcriptional regulator protein; LysR family transcriptional regulator 493454 5319828 Smed_5526 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314211.1 492501 D 366394 CDS YP_001314212.1 150377617 5319831 complement(493994..494662) 1 NC_009621.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ret:RHE_PF00545 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 494662 5319831 Smed_5529 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001314212.1 493994 R 366394 CDS YP_001314213.1 150377618 5319832 494862..496157 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: bch:Bcen2424_3503 epoxide hydrolase domain protein; epocide hydrolase domain-containing protein 496157 5319832 Smed_5530 Sinorhizobium medicae WSM419 epocide hydrolase domain-containing protein YP_001314213.1 494862 D 366394 CDS YP_001314214.1 150377619 5319833 496252..497061 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: sme:SMb20214 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 497061 5319833 Smed_5531 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314214.1 496252 D 366394 CDS YP_001314215.1 150377620 5319834 497144..498175 1 NC_009621.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 498175 5319834 Smed_5532 Sinorhizobium medicae WSM419 D-cysteine desulfhydrase YP_001314215.1 497144 D 366394 CDS YP_001314216.1 150377621 5319835 498212..498805 1 NC_009621.1 PFAM: NADPH-dependent FMN reductase; KEGG: pde:Pden_0330 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 498805 5319835 Smed_5533 Sinorhizobium medicae WSM419 NADPH-dependent FMN reductase YP_001314216.1 498212 D 366394 CDS YP_001314217.1 150377622 5319836 499451..499828 1 NC_009621.1 hypothetical protein 499828 5319836 Smed_5534 Sinorhizobium medicae WSM419 hypothetical protein YP_001314217.1 499451 D 366394 CDS YP_001314218.1 150377623 5319837 complement(499990..500940) 1 NC_009621.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ret:RHE_PF00542 probable enoyl-CoA hydratase protein; enoyl-CoA hydratase/isomerase 500940 5319837 Smed_5535 Sinorhizobium medicae WSM419 enoyl-CoA hydratase/isomerase YP_001314218.1 499990 R 366394 CDS YP_001314219.1 150377624 5319838 complement(501006..501476) 1 NC_009621.1 PFAM: Endoribonuclease L-PSP; KEGG: ret:RHE_PF00541 hypothetical protein; endoribonuclease L-PSP 501476 5319838 Smed_5536 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001314219.1 501006 R 366394 CDS YP_001314220.1 150377625 5319839 complement(501470..502195) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PF00540 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 502195 5319839 Smed_5537 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314220.1 501470 R 366394 CDS YP_001314221.1 150377626 5319840 502456..503550 1 NC_009621.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ret:RHE_PF00539 probable dioxygenase protein; 2-nitropropane dioxygenase NPD 503550 5319840 Smed_5538 Sinorhizobium medicae WSM419 2-nitropropane dioxygenase NPD YP_001314221.1 502456 D 366394 CDS YP_001314222.1 150377627 5319841 503715..504923 1 NC_009621.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: pol:Bpro_1488 protein of unknown function DUF1228; hypothetical protein 504923 5319841 Smed_5539 Sinorhizobium medicae WSM419 hypothetical protein YP_001314222.1 503715 D 366394 CDS YP_001314223.1 150377628 5319842 complement(504920..505600) 1 NC_009621.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pfo:Pfl_5708 two component transcriptional regulator, LuxR family; response regulator receiver protein 505600 5319842 Smed_5540 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314223.1 504920 R 366394 CDS YP_001314224.1 150377629 5319843 complement(505612..505785) 1 NC_009621.1 hypothetical protein 505785 5319843 Smed_5541 Sinorhizobium medicae WSM419 hypothetical protein YP_001314224.1 505612 R 366394 CDS YP_001314225.1 150377630 5319844 505923..506597 1 NC_009621.1 PFAM: ThiJ/PfpI domain protein; KEGG: ret:RHE_PF00538 hypothetical protein; ThiJ/PfpI domain-containing protein 506597 5319844 Smed_5542 Sinorhizobium medicae WSM419 ThiJ/PfpI domain-containing protein YP_001314225.1 505923 D 366394 CDS YP_001314226.1 150377631 5319845 506613..507074 1 NC_009621.1 KEGG: rle:RL1855 hypothetical protein; hypothetical protein 507074 5319845 Smed_5543 Sinorhizobium medicae WSM419 hypothetical protein YP_001314226.1 506613 D 366394 CDS YP_001314227.1 150377632 5319846 507217..507582 1 NC_009621.1 hypothetical protein 507582 5319846 Smed_5544 Sinorhizobium medicae WSM419 hypothetical protein YP_001314227.1 507217 D 366394 CDS YP_001314228.1 150377633 5319848 complement(508275..509315) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PF00536 probable epoxide hydrolase protein; alpha/beta hydrolase fold protein 509315 5319848 Smed_5546 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001314228.1 508275 R 366394 CDS YP_001314229.1 150377634 5319849 complement(510018..511541) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: ret:RHE_PF00534 probable aldehyde dehydrogenase protein; aldehyde dehydrogenase 511541 5319849 Smed_5547 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001314229.1 510018 R 366394 CDS YP_001314230.1 150377635 5319851 complement(513870..514091) 1 NC_009621.1 hypothetical protein 514091 5319851 Smed_5549 Sinorhizobium medicae WSM419 hypothetical protein YP_001314230.1 513870 R 366394 CDS YP_001314231.1 150377636 5319852 complement(514088..516499) 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: pfo:Pfl_2251 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 516499 5319852 Smed_5550 Sinorhizobium medicae WSM419 PAS/PAC sensor signal transduction histidine kinase YP_001314231.1 514088 R 366394 CDS YP_001314232.1 150377637 5319853 complement(516499..517824) 1 NC_009621.1 KEGG: par:Psyc_1582 MFS Ni2+ efflux pump NreB; hypothetical protein 517824 5319853 Smed_5551 Sinorhizobium medicae WSM419 hypothetical protein YP_001314232.1 516499 R 366394 CDS YP_001314233.1 150377638 5319854 complement(518010..518354) 1 NC_009621.1 hypothetical protein 518354 5319854 Smed_5552 Sinorhizobium medicae WSM419 hypothetical protein YP_001314233.1 518010 R 366394 CDS YP_001314234.1 150377639 5319855 complement(518573..518782) 1 NC_009621.1 hypothetical protein 518782 5319855 Smed_5553 Sinorhizobium medicae WSM419 hypothetical protein YP_001314234.1 518573 R 366394 CDS YP_001314235.1 150377640 5319856 complement(519007..520017) 1 NC_009621.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rle:RL3793 putative LacI family transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 520017 5319856 Smed_5554 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001314235.1 519007 R 366394 CDS YP_001314236.1 150377641 5319857 520226..522154 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: rle:RL3794 putative solute-binding component of ABC transporter; extracellular solute-binding protein 522154 5319857 Smed_5555 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314236.1 520226 D 366394 CDS YP_001314237.1 150377642 5319858 522258..524372 1 NC_009621.1 PFAM: protein of unknown function DUF187; KEGG: rle:RL3795 hypothetical protein; hypothetical protein 524372 5319858 Smed_5556 Sinorhizobium medicae WSM419 hypothetical protein YP_001314237.1 522258 D 366394 CDS YP_001314238.1 150377643 5319859 524400..525386 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL3796 putative transmembrane component of ABC transporter; binding-protein-dependent transport systems inner membrane component 525386 5319859 Smed_5557 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314238.1 524400 D 366394 CDS YP_001314239.1 150377644 5319860 525396..526571 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL3797 putative transmembrane component of ABC transporter; binding-protein-dependent transport systems inner membrane component 526571 5319860 Smed_5558 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314239.1 525396 D 366394 CDS YP_001314240.1 150377645 5319861 526584..528296 1 NC_009621.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rle:RL3798 putative ATP-binding component of ABC transporter; ABC transporter-like protein 528296 5319861 Smed_5559 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314240.1 526584 D 366394 CDS YP_001314241.1 150377646 5319862 528309..529094 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mes:Meso_4459 xylose isomerase-like TIM barrel; hydroxypyruvate isomerase 529094 5319862 Smed_5560 Sinorhizobium medicae WSM419 hydroxypyruvate isomerase YP_001314241.1 528309 D 366394 CDS YP_001314242.1 150377647 5319863 529098..529949 1 NC_009621.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rle:RL3800 putative oxidoreductase; 2-hydroxy-3-oxopropionate reductase 529949 5319863 Smed_5561 Sinorhizobium medicae WSM419 2-hydroxy-3-oxopropionate reductase YP_001314242.1 529098 D 366394 CDS YP_001314243.1 150377648 5319864 530036..531250 1 NC_009621.1 PFAM: MOFRL domain protein; KEGG: ret:RHE_CH01794 hydroxypyruvate reductase protein; hydroxypyruvate reductase 531250 5319864 Smed_5562 Sinorhizobium medicae WSM419 hydroxypyruvate reductase YP_001314243.1 530036 D 366394 CDS YP_001314244.1 150377649 5319865 531458..531769 1 NC_009621.1 KEGG: atc:AGR_L_701 hypothetical protein; hypothetical protein 531769 5319865 Smed_5563 Sinorhizobium medicae WSM419 hypothetical protein YP_001314244.1 531458 D 366394 CDS YP_001314245.1 150377650 5319866 complement(532088..532513) 1 NC_009621.1 KEGG: ret:RHE_CH03919 hypothetical protein; hypothetical protein 532513 5319866 Smed_5564 Sinorhizobium medicae WSM419 hypothetical protein YP_001314245.1 532088 R 366394 CDS YP_001314246.1 150377651 5319867 complement(532606..533013) 1 NC_009621.1 PFAM: OsmC family protein; KEGG: ret:RHE_CH03920 putative stress-induced OsmC-like protein; OsmC family protein 533013 5319867 Smed_5565 Sinorhizobium medicae WSM419 OsmC family protein YP_001314246.1 532606 R 366394 CDS YP_001314247.1 150377652 5319868 complement(533035..533634) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_4523 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 533634 5319868 Smed_5566 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314247.1 533035 R 366394 CDS YP_001314248.1 150377653 5319869 534316..534537 1 NC_009621.1 KEGG: ret:RHE_CH03921 hypothetical protein; hypothetical protein 534537 5319869 Smed_5567 Sinorhizobium medicae WSM419 hypothetical protein YP_001314248.1 534316 D 366394 CDS YP_001314249.1 150377654 5319871 complement(534681..535598) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH03922 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 535598 5319871 Smed_5569 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314249.1 534681 R 366394 CDS YP_001314250.1 150377655 5319872 535882..536835 1 NC_009621.1 KEGG: rle:pRL110579 putative transmembrane protein; putative transmembrane protein 536835 5319872 Smed_5570 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001314250.1 535882 D 366394 CDS YP_001314251.1 150377656 5319873 complement(537229..538455) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; OsmC family protein; KEGG: sme:SMa1898 putative redox protein; OsmC family protein 538455 5319873 Smed_5571 Sinorhizobium medicae WSM419 OsmC family protein YP_001314251.1 537229 R 366394 CDS YP_001314252.1 150377657 5319874 complement(538657..539163) 1 NC_009621.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 539163 5319874 Smed_5572 Sinorhizobium medicae WSM419 methionine sulfoxide reductase A YP_001314252.1 538657 R 366394 CDS YP_001314253.1 150377658 5319875 complement(539164..539607) 1 NC_009621.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 539607 5319875 Smed_5573 Sinorhizobium medicae WSM419 methionine sulfoxide reductase B YP_001314253.1 539164 R 366394 CDS YP_001314254.1 150377659 5319876 complement(539716..540591) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1893 putative LysR-family transcriptional activator; LysR family transcriptional regulator 540591 5319876 Smed_5574 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314254.1 539716 R 366394 CDS YP_001314255.1 150377660 5319878 complement(541185..542774) 1 NC_009621.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rle:RL2731 putative two-component sensor histidine kinase transcriptional regulatory protein; histidine kinase 542774 5319878 Smed_5576 Sinorhizobium medicae WSM419 histidine kinase YP_001314255.1 541185 R 366394 CDS YP_001314256.1 150377661 5319879 complement(542866..544368) 1 NC_009621.1 PFAM: KaiA binding; SMART: AAA ATPase; KEGG: rle:RL2732 putative protein kinase; non-specific serine/threonine protein kinase 544368 5319879 Smed_5577 Sinorhizobium medicae WSM419 non-specific serine/threonine protein kinase YP_001314256.1 542866 R 366394 CDS YP_001314257.1 150377662 5319880 complement(544852..545289) 1 NC_009621.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rle:pRL120741 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 545289 5319880 Smed_5578 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001314257.1 544852 R 366394 CDS YP_001314258.1 150377663 5319881 545820..546905 1 NC_009621.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr3587 ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROTEIN AGLK; ABC transporter-like protein 546905 5319881 Smed_5579 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314258.1 545820 D 366394 CDS YP_001314259.1 150377664 5319882 complement(546981..547823) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3588 sugar transporter integral membrane protein (permease); binding-protein-dependent transport systems inner membrane component 547823 5319882 Smed_5580 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314259.1 546981 R 366394 CDS YP_001314260.1 150377665 5319883 complement(547820..548707) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3589 sugar transporter integral membrane protein (permease); binding-protein-dependent transport systems inner membrane component 548707 5319883 Smed_5581 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314260.1 547820 R 366394 CDS YP_001314261.1 150377666 5319884 complement(548777..550051) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll3590 sugar transporter sugar binding protein; extracellular solute-binding protein 550051 5319884 Smed_5582 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314261.1 548777 R 366394 CDS YP_001314262.1 150377667 5319885 complement(550099..551607) 1 NC_009621.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: mlo:mll3591 alpha-L-arabinofuranosidase; Alpha-N-arabinofuranosidase 551607 5319885 Smed_5583 Sinorhizobium medicae WSM419 Alpha-N-arabinofuranosidase YP_001314262.1 550099 R 366394 CDS YP_001314263.1 150377668 5319886 complement(551709..552632) 1 NC_009621.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; KEGG: mlo:mll3592 hypothetical protein; transcriptional regulator, TrmB 552632 5319886 Smed_5584 Sinorhizobium medicae WSM419 transcriptional regulator, TrmB YP_001314263.1 551709 R 366394 CDS YP_001314264.1 150377669 5319887 complement(552723..552872) 1 NC_009621.1 hypothetical protein 552872 5319887 Smed_5585 Sinorhizobium medicae WSM419 hypothetical protein YP_001314264.1 552723 R 366394 CDS YP_001314265.1 150377670 5319890 complement(554537..554929) 1 NC_009621.1 KEGG: azo:azo2433 short-chain dehydrogenase family protein; short-chain dehydrogenase family protein 554929 5319890 Smed_5588 Sinorhizobium medicae WSM419 short-chain dehydrogenase family protein YP_001314265.1 554537 R 366394 CDS YP_001314266.1 150377671 5319891 complement(554943..556268) 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa1869 putative deaminase; FAD dependent oxidoreductase 556268 5319891 Smed_5589 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314266.1 554943 R 366394 CDS YP_001314267.1 150377672 5319892 556504..556980 1 NC_009621.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMa1867 putative AsnC (lrp)-family transcriptional activator; AsnC family transcriptional regulator 556980 5319892 Smed_5590 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001314267.1 556504 D 366394 CDS YP_001314268.1 150377673 5319893 complement(557089..558744) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1864 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 558744 5319893 Smed_5591 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314268.1 557089 R 366394 CDS YP_001314269.1 150377674 5319894 complement(558744..559607) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1863 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 559607 5319894 Smed_5592 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314269.1 558744 R 366394 CDS YP_001314270.1 150377675 5319895 complement(559604..560554) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1862 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 560554 5319895 Smed_5593 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314270.1 559604 R 366394 CDS YP_001314271.1 150377676 5319896 complement(560644..562251) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa1860 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 562251 5319896 Smed_5594 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314271.1 560644 R 366394 CDS YP_001314272.1 150377677 5319897 complement(562322..563035) 1 NC_009621.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); KEGG: sme:SMa1857 hypothetical protein; HAD family hydrolase 563035 5319897 Smed_5595 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001314272.1 562322 R 366394 CDS YP_001314273.1 150377678 5319898 complement(563270..564646) 1 NC_009621.1 PFAM: aminotransferase class-III; KEGG: sme:SMa1855 hypothetical protein; hypothetical protein 564646 5319898 Smed_5596 Sinorhizobium medicae WSM419 hypothetical protein YP_001314273.1 563270 R 366394 CDS YP_001314274.1 150377679 5319899 complement(564661..565497) 1 NC_009621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMa1853 hypothetical protein; GCN5-like N-acetyltransferase 565497 5319899 Smed_5597 Sinorhizobium medicae WSM419 GCN5-like N-acetyltransferase YP_001314274.1 564661 R 366394 CDS YP_001314275.1 150377680 5319900 565813..566481 1 NC_009621.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMa1851 putative dehalogenase; haloacid dehalogenase, type II 566481 5319900 Smed_5598 Sinorhizobium medicae WSM419 haloacid dehalogenase, type II YP_001314275.1 565813 D 366394 CDS YP_001314276.1 150377681 5319901 566499..567773 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa1850 putative oxidoreductase; FAD dependent oxidoreductase 567773 5319901 Smed_5599 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314276.1 566499 D 366394 CDS YP_001314277.1 150377682 5319902 complement(568053..569507) 1 NC_009621.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMa1848 GabD5 succinate semialdehyde dehdyrogenase; succinic semialdehyde dehydrogenase 569507 5319902 Smed_5600 Sinorhizobium medicae WSM419 succinic semialdehyde dehydrogenase YP_001314277.1 568053 R 366394 CDS YP_001314278.1 150377683 5319903 complement(569542..570585) 1 NC_009621.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 570585 5319903 Smed_5601 Sinorhizobium medicae WSM419 3-isopropylmalate dehydrogenase YP_001314278.1 569542 R 366394 CDS YP_001314279.1 150377684 5319904 complement(570595..572058) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMa1844 putative aldehyde; aldehyde dehydrogenase 572058 5319904 Smed_5602 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001314279.1 570595 R 366394 CDS YP_001314280.1 150377685 5319905 complement(572428..572781) 1 NC_009621.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: sme:SMa1840 hypothetical protein; hypothetical protein 572781 5319905 Smed_5603 Sinorhizobium medicae WSM419 hypothetical protein YP_001314280.1 572428 R 366394 CDS YP_001314281.1 150377686 5319906 complement(572869..573792) 1 NC_009621.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMa1838 hypothetical protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 573792 5319906 Smed_5604 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001314281.1 572869 R 366394 CDS YP_001314282.1 150377687 5319907 complement(573804..574928) 1 NC_009621.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 574928 5319907 Smed_5605 Sinorhizobium medicae WSM419 acetylornithine deacetylase YP_001314282.1 573804 R 366394 CDS YP_001314283.1 150377688 5319908 575258..576148 1 NC_009621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMa1835 hypothetical protein; GCN5-like N-acetyltransferase 576148 5319908 Smed_5606 Sinorhizobium medicae WSM419 GCN5-like N-acetyltransferase YP_001314283.1 575258 D 366394 CDS YP_001314284.1 150377689 5319910 576858..578051 1 NC_009621.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00807 putative transport transmembrane protein; major facilitator transporter 578051 5319910 Smed_5608 Sinorhizobium medicae WSM419 major facilitator transporter YP_001314284.1 576858 D 366394 CDS YP_001314285.1 150377690 5319911 complement(578073..578792) 1 NC_009621.1 PFAM: high-affinity nickel-transporter; KEGG: sme:SMa1644 hypothetical protein; high-affinity nickel-transporter 578792 5319911 Smed_5609 Sinorhizobium medicae WSM419 high-affinity nickel-transporter YP_001314285.1 578073 R 366394 CDS YP_001314286.1 150377691 5319912 complement(578798..579232) 1 NC_009621.1 PFAM: SNARE associated Golgi protein; KEGG: atc:AGR_L_3254 hypothetical protein; hypothetical protein 579232 5319912 Smed_5610 Sinorhizobium medicae WSM419 hypothetical protein YP_001314286.1 578798 R 366394 CDS YP_001314287.1 150377692 5319913 complement(579229..580551) 1 NC_009621.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMa1641 probable NreB protein; major facilitator transporter 580551 5319913 Smed_5611 Sinorhizobium medicae WSM419 major facilitator transporter YP_001314287.1 579229 R 366394 CDS YP_001314288.1 150377693 5319914 complement(580564..580839) 1 NC_009621.1 PFAM: protein of unknown function DUF156; KEGG: rle:RL1176 hypothetical protein; hypothetical protein 580839 5319914 Smed_5612 Sinorhizobium medicae WSM419 hypothetical protein YP_001314288.1 580564 R 366394 CDS YP_001314289.1 150377694 5319915 580922..581305 1 NC_009621.1 KEGG: sme:SMa1638 hypothetical protein; hypothetical protein 581305 5319915 Smed_5613 Sinorhizobium medicae WSM419 hypothetical protein YP_001314289.1 580922 D 366394 CDS YP_001314290.1 150377695 5319916 581353..582084 1 NC_009621.1 KEGG: maq:Maqu_3196 putative ORF1 (plasmid pTOM9); hypothetical protein 582084 5319916 Smed_5614 Sinorhizobium medicae WSM419 hypothetical protein YP_001314290.1 581353 D 366394 CDS YP_001314291.1 150377696 5319917 582109..582762 1 NC_009621.1 KEGG: maq:Maqu_3197 putative (L31491) ORF2; putative (plasmid pTOM9); hypothetical protein 582762 5319917 Smed_5615 Sinorhizobium medicae WSM419 hypothetical protein YP_001314291.1 582109 D 366394 CDS YP_001314292.1 150377697 5319918 583130..584068 1 NC_009621.1 KEGG: rle:RL1179 hypothetical protein; hypothetical protein 584068 5319918 Smed_5616 Sinorhizobium medicae WSM419 hypothetical protein YP_001314292.1 583130 D 366394 CDS YP_001314293.1 150377698 5319919 complement(584082..584780) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa1654 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 584780 5319919 Smed_5617 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314293.1 584082 R 366394 CDS YP_001314294.1 150377699 5319921 585732..587312 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa1651 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 587312 5319921 Smed_5619 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314294.1 585732 D 366394 CDS YP_001314295.1 150377700 5319922 587325..588260 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1650 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 588260 5319922 Smed_5620 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314295.1 587325 D 366394 CDS YP_001314296.1 150377701 5319923 588263..589162 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1649 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 589162 5319923 Smed_5621 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314296.1 588263 D 366394 CDS YP_001314297.1 150377702 5319924 589152..590147 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1647 putative ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 590147 5319924 Smed_5622 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314297.1 589152 D 366394 CDS YP_001314298.1 150377703 5319925 590144..591151 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa1646 putative ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 591151 5319925 Smed_5623 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314298.1 590144 D 366394 CDS YP_001314299.1 150377704 5319926 592144..593433 1 NC_009621.1 PFAM: Integrase catalytic region; KEGG: bja:bll1940 putative transposase; integrase catalytic protein 593433 5319926 Smed_5624 Sinorhizobium medicae WSM419 integrase catalytic protein YP_001314299.1 592144 D 366394 CDS YP_001314300.1 150377705 5319927 593433..594233 1 NC_009621.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00081 probable insertion sequence ATP-binding protein, IS21 family; IstB ATP binding domain-containing protein 594233 5319927 Smed_5625 Sinorhizobium medicae WSM419 IstB ATP binding domain-containing protein YP_001314300.1 593433 D 366394 CDS YP_001314301.1 150377706 5319928 complement(594336..595142) 1 NC_009621.1 KEGG: rle:pRL110217 hypothetical protein; hypothetical protein 595142 5319928 Smed_5626 Sinorhizobium medicae WSM419 hypothetical protein YP_001314301.1 594336 R 366394 CDS YP_001314302.1 150377707 5319929 complement(595192..595404) 1 NC_009621.1 hypothetical protein 595404 5319929 Smed_5627 Sinorhizobium medicae WSM419 hypothetical protein YP_001314302.1 595192 R 366394 CDS YP_001314303.1 150377708 5319931 complement(596672..597409) 1 NC_009621.1 KEGG: mlo:mlr2577 hypothetical protein; hypothetical protein 597409 5319931 Smed_5629 Sinorhizobium medicae WSM419 hypothetical protein YP_001314303.1 596672 R 366394 CDS YP_001314304.1 150377709 5319932 complement(597783..598133) 1 NC_009621.1 KEGG: sme:SMc01774 hypothetical protein; hypothetical protein 598133 5319932 Smed_5630 Sinorhizobium medicae WSM419 hypothetical protein YP_001314304.1 597783 R 366394 CDS YP_001314305.1 150377710 5319933 598350..598595 1 NC_009621.1 hypothetical protein 598595 5319933 Smed_5631 Sinorhizobium medicae WSM419 hypothetical protein YP_001314305.1 598350 D 366394 CDS YP_001314306.1 150377711 5319934 complement(598699..599121) 1 NC_009621.1 PFAM: response regulator receiver; KEGG: sme:SMa1688 putative two-component response regulator; response regulator receiver protein 599121 5319934 Smed_5632 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314306.1 598699 R 366394 CDS YP_001314307.1 150377712 5319935 complement(599160..599816) 1 NC_009621.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMa1686 putative two-component response regulator; response regulator receiver protein 599816 5319935 Smed_5633 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314307.1 599160 R 366394 CDS YP_001314308.1 150377713 5319936 complement(599823..601697) 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMa0939 probable sensor histidine kinase of two-component system; integral membrane sensor signal transduction histidine kinase 601697 5319936 Smed_5634 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001314308.1 599823 R 366394 CDS YP_001314309.1 150377714 5319943 606459..607856 1 NC_009621.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: mlo:mll5470 hypothetical protein; hypothetical protein 607856 5319943 Smed_5641 Sinorhizobium medicae WSM419 hypothetical protein YP_001314309.1 606459 D 366394 CDS YP_001314310.1 150377715 5319944 607955..609262 1 NC_009621.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rde:RD1_3749 hypothetical protein; hypothetical protein 609262 5319944 Smed_5642 Sinorhizobium medicae WSM419 hypothetical protein YP_001314310.1 607955 D 366394 CDS YP_001314311.1 150377716 5319945 complement(609524..609658) 1 NC_009621.1 hypothetical protein 609658 5319945 Smed_5643 Sinorhizobium medicae WSM419 hypothetical protein YP_001314311.1 609524 R 366394 CDS YP_001314312.1 150377717 5319948 610988..611296 1 NC_009621.1 KEGG: bsu:BG10456 tunicamycin resistance protein; hypothetical protein 611296 5319948 Smed_5646 Sinorhizobium medicae WSM419 hypothetical protein YP_001314312.1 610988 D 366394 CDS YP_001314313.1 150377718 5319949 complement(611579..612658) 1 NC_009621.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMa0175 hypothetical protein; mechanosensitive ion channel MscS 612658 5319949 Smed_5647 Sinorhizobium medicae WSM419 mechanosensitive ion channel MscS YP_001314313.1 611579 R 366394 CDS YP_001314314.1 150377719 5319950 complement(613068..614369) 1 NC_009621.1 KEGG: sme:SMa2101 probable nitrilotriacetate monooxygenase component A; putative nitrilotriacetate monooxygenase component A 614369 5319950 Smed_5648 Sinorhizobium medicae WSM419 putative nitrilotriacetate monooxygenase component A YP_001314314.1 613068 R 366394 CDS YP_001314315.1 150377720 5319951 complement(614385..615035) 1 NC_009621.1 KEGG: sme:SMa2099 hypothetical protein; hypothetical protein 615035 5319951 Smed_5649 Sinorhizobium medicae WSM419 hypothetical protein YP_001314315.1 614385 R 366394 CDS YP_001314316.1 150377721 5319952 complement(615053..616303) 1 NC_009621.1 PFAM: monooxygenase FAD-binding; KEGG: sme:SMa2097 hypothetical protein; FAD-binding monooxygenase 616303 5319952 Smed_5650 Sinorhizobium medicae WSM419 FAD-binding monooxygenase YP_001314316.1 615053 R 366394 CDS YP_001314317.1 150377722 5319953 complement(616300..617178) 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: sme:SMa2095 hypothetical protein; NmrA family protein 617178 5319953 Smed_5651 Sinorhizobium medicae WSM419 NmrA family protein YP_001314317.1 616300 R 366394 CDS YP_001314318.1 150377723 5319954 complement(617175..618209) 1 NC_009621.1 KEGG: sme:SMa2093 hypothetical protein; hypothetical protein 618209 5319954 Smed_5652 Sinorhizobium medicae WSM419 hypothetical protein YP_001314318.1 617175 R 366394 CDS YP_001314319.1 150377724 5319955 complement(618220..619452) 1 NC_009621.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMa2091 hypothetical protein; acyl-CoA dehydrogenase type 2 619452 5319955 Smed_5653 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase type 2 YP_001314319.1 618220 R 366394 CDS YP_001314320.1 150377725 5319956 complement(619466..620506) 1 NC_009621.1 KEGG: sme:SMa2087 hypothetical protein; hypothetical protein 620506 5319956 Smed_5654 Sinorhizobium medicae WSM419 hypothetical protein YP_001314320.1 619466 R 366394 CDS YP_001314321.1 150377726 5319957 620805..621791 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2085 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 621791 5319957 Smed_5655 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314321.1 620805 D 366394 CDS YP_001314322.1 150377727 5319958 621791..622789 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa2083 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 622789 5319958 Smed_5656 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314322.1 621791 D 366394 CDS YP_001314323.1 150377728 5319959 622792..623793 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa2081 probable ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 623793 5319959 Smed_5657 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314323.1 622792 D 366394 CDS YP_001314324.1 150377729 5319960 623771..624715 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMa2079 probable ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 624715 5319960 Smed_5658 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314324.1 623771 D 366394 CDS YP_001314325.1 150377730 5319961 624730..625791 1 NC_009621.1 PFAM: aldo/keto reductase; KEGG: sme:SMa2077 probable oxidoreductase; aldo/keto reductase 625791 5319961 Smed_5659 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001314325.1 624730 D 366394 CDS YP_001314326.1 150377731 5319964 628249..629883 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMa2075 probable extracellular solute-binding protein, family 5; extracellular solute-binding protein 629883 5319964 Smed_5662 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314326.1 628249 D 366394 CDS YP_001314327.1 150377732 5319965 629982..631205 1 NC_009621.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMa2073 hypothetical protein; acyl-CoA dehydrogenase type 2 631205 5319965 Smed_5663 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase type 2 YP_001314327.1 629982 D 366394 CDS YP_001314328.1 150377733 5319966 631746..632225 1 NC_009621.1 PFAM: Ion transport 2 domain protein; KEGG: rme:Rmet_1713 ion transport 2; Ion transport 2 domain-containing protein 632225 5319966 Smed_5664 Sinorhizobium medicae WSM419 Ion transport 2 domain-containing protein YP_001314328.1 631746 D 366394 CDS YP_001314329.1 150377734 5319967 632333..633421 1 NC_009621.1 PFAM: protein of unknown function UPF0118; KEGG: bxe:Bxe_A3174 hypothetical protein; hypothetical protein 633421 5319967 Smed_5665 Sinorhizobium medicae WSM419 hypothetical protein YP_001314329.1 632333 D 366394 CDS YP_001314330.1 150377735 5319969 complement(634427..635455) 1 NC_009621.1 KEGG: rle:RL2870 putative transmembrane protein; putative transmembrane protein 635455 5319969 Smed_5667 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001314330.1 634427 R 366394 CDS YP_001314331.1 150377736 5319970 complement(635445..636548) 1 NC_009621.1 PFAM: secretion protein HlyD family protein; KEGG: rle:RL2871 putative transmembrane efflux pump; secretion protein HlyD family protein 636548 5319970 Smed_5668 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001314331.1 635445 R 366394 CDS YP_001314332.1 150377737 5319971 complement(636712..637035) 1 NC_009621.1 hypothetical protein 637035 5319971 Smed_5669 Sinorhizobium medicae WSM419 hypothetical protein YP_001314332.1 636712 R 366394 CDS YP_001314333.1 150377738 5319972 637129..637572 1 NC_009621.1 KEGG: ret:RHE_PE00297 putative plasmid stabilization protein; plasmid stability protein-like protein 637572 5319972 Smed_5670 Sinorhizobium medicae WSM419 plasmid stability protein-like protein YP_001314333.1 637129 D 366394 CDS YP_001314334.1 150377739 5319973 637686..637895 1 NC_009621.1 KEGG: ret:RHE_PE00296 putative plasmid stability protein; putative plasmid stability protein 637895 5319973 Smed_5671 Sinorhizobium medicae WSM419 putative plasmid stability protein YP_001314334.1 637686 D 366394 CDS YP_001314335.1 150377740 5319974 complement(638138..640195) 1 NC_009621.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: mlo:mll4364 hypothetical protein; diguanylate cyclase/phosphodiesterase 640195 5319974 Smed_5672 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001314335.1 638138 R 366394 CDS YP_001314336.1 150377741 5319976 640930..641544 1 NC_009621.1 KEGG: sme:SMa1702 hypothetical 21.7 KDA protein in syrb 5'region (ORF4); hypothetical protein 641544 5319976 Smed_5674 Sinorhizobium medicae WSM419 hypothetical protein YP_001314336.1 640930 D 366394 CDS YP_001314337.1 150377742 5319977 641822..642277 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa1698 SyrB regulatory protein; transposase IS3/IS911 family protein 642277 5319977 Smed_5675 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314337.1 641822 D 366394 CDS YP_001314338.1 150377743 5319978 642526..643116 1 NC_009621.1 KEGG: sme:SMa1697 hypothetical protein; hypothetical protein 643116 5319978 Smed_5676 Sinorhizobium medicae WSM419 hypothetical protein YP_001314338.1 642526 D 366394 CDS YP_001314339.1 150377744 5319979 644069..644308 1 NC_009621.1 hypothetical protein 644308 5319979 Smed_5677 Sinorhizobium medicae WSM419 hypothetical protein YP_001314339.1 644069 D 366394 CDS YP_001314340.1 150377745 5319980 644804..645076 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: sus:Acid_2062 putative transcriptional regulator, XRE family; XRE family transcriptional regulator 645076 5319980 Smed_5678 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314340.1 644804 D 366394 CDS YP_001314341.1 150377746 5319981 645196..646284 1 NC_009621.1 PFAM: HipA domain protein; KEGG: neu:NE1310 possible HipA protein; HipA domain-containing protein 646284 5319981 Smed_5679 Sinorhizobium medicae WSM419 HipA domain-containing protein YP_001314341.1 645196 D 366394 CDS YP_001314342.1 150377747 5319985 647512..648426 1 NC_009621.1 KEGG: gbe:GbCGDNIH1_1624 hypothetical membrane spanning protein; hypothetical protein 648426 5319985 Smed_5683 Sinorhizobium medicae WSM419 hypothetical protein YP_001314342.1 647512 D 366394 CDS YP_001314343.1 150377748 5319986 648806..649966 1 NC_009621.1 PFAM: glycosyl transferase group 1; KEGG: sde:Sde_0148 glycoside hydrolase, family 10; group 1 glycosyl transferase 649966 5319986 Smed_5684 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001314343.1 648806 D 366394 CDS YP_001314344.1 150377749 5319987 650041..652392 1 NC_009621.1 PFAM: UDP-galactopyranose mutase; KEGG: xcb:XC_3769 UDP-galactopyranose mutase; UDP-galactopyranose mutase 652392 5319987 Smed_5685 Sinorhizobium medicae WSM419 UDP-galactopyranose mutase YP_001314344.1 650041 D 366394 CDS YP_001314345.1 150377750 5319988 652389..655631 1 NC_009621.1 PFAM: oxidoreductase domain protein; glycosyl transferase group 1; Oxidoreductase domain; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mkm:Mkms_3977 alcohol dehydrogenase, zinc-binding domain protein; group 1 glycosyl transferase 655631 5319988 Smed_5686 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001314345.1 652389 D 366394 CDS YP_001314346.1 150377751 5319989 655628..657925 1 NC_009621.1 PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_1193 hypothetical protein; group 1 glycosyl transferase 657925 5319989 Smed_5687 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001314346.1 655628 D 366394 CDS YP_001314347.1 150377752 5319991 complement(658125..660005) 1 NC_009621.1 hypothetical protein 660005 5319991 Smed_5689 Sinorhizobium medicae WSM419 hypothetical protein YP_001314347.1 658125 R 366394 CDS YP_001314348.1 150377753 5319992 complement(660039..660620) 1 NC_009621.1 hypothetical protein 660620 5319992 Smed_5690 Sinorhizobium medicae WSM419 hypothetical protein YP_001314348.1 660039 R 366394 CDS YP_001314349.1 150377754 5319993 660858..664025 1 NC_009621.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; sterile alpha motif SAM protein; Sterile alpha motif homology 2; SMART: Tetratricopeptide domain protein; KEGG: bja:blr2238 putative adenylate cyclase; sterile alpha motif-containing protein 664025 5319993 Smed_5691 Sinorhizobium medicae WSM419 sterile alpha motif-containing protein YP_001314349.1 660858 D 366394 CDS YP_001314350.1 150377755 5319994 complement(664477..665976) 1 NC_009621.1 KEGG: pen:PSEEN4433 subtilisin-like serine protease; hypothetical protein 665976 5319994 Smed_5692 Sinorhizobium medicae WSM419 hypothetical protein YP_001314350.1 664477 R 366394 CDS YP_001314351.1 150377756 5319995 complement(666565..667062) 1 NC_009621.1 KEGG: bja:blr6214 putative cytochrome c protein; hypothetical protein 667062 5319995 Smed_5693 Sinorhizobium medicae WSM419 hypothetical protein YP_001314351.1 666565 R 366394 CDS YP_001314352.1 150377757 5319996 complement(667218..667565) 1 NC_009621.1 hypothetical protein 667565 5319996 Smed_5694 Sinorhizobium medicae WSM419 hypothetical protein YP_001314352.1 667218 R 366394 CDS YP_001314353.1 150377758 5319997 667766..668467 1 NC_009621.1 PFAM: cyclic nucleotide-binding; KEGG: neu:NE1296 cyclic nucleotide-binding domain:cAMP-dependent protein kinase; cyclic nucleotide-binding protein 668467 5319997 Smed_5695 Sinorhizobium medicae WSM419 cyclic nucleotide-binding protein YP_001314353.1 667766 D 366394 CDS YP_001314354.1 150377759 5319999 complement(672163..672825) 1 NC_009621.1 PFAM: regulatory protein TetR; KEGG: ret:RHE_PC00210 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 672825 5319999 Smed_5697 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001314354.1 672163 R 366394 CDS YP_001314355.1 150377760 5320000 673008..673907 1 NC_009621.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 673907 5320000 Smed_5698 Sinorhizobium medicae WSM419 shikimate 5-dehydrogenase YP_001314355.1 673008 D 366394 CDS YP_001314356.1 150377761 5320001 673897..674052 1 NC_009621.1 hypothetical protein 674052 5320001 Smed_5699 Sinorhizobium medicae WSM419 hypothetical protein YP_001314356.1 673897 D 366394 CDS YP_001314357.1 150377762 5320002 complement(674188..674931) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rle:pRL110073 putative GntR family transcriptional regulator; GntR family transcriptional regulator 674931 5320002 Smed_5700 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314357.1 674188 R 366394 CDS YP_001314358.1 150377763 5320003 675073..676059 1 NC_009621.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rde:RD1_0742 C4-dicarboxylate-binding protein, putative; TRAP dicarboxylate transporter subunit DctP 676059 5320003 Smed_5701 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001314358.1 675073 D 366394 CDS YP_001314359.1 150377764 5320004 676143..676661 1 NC_009621.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_2207 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 676661 5320004 Smed_5702 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001314359.1 676143 D 366394 CDS YP_001314360.1 150377765 5320005 676658..677959 1 NC_009621.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: jan:Jann_4136 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 677959 5320005 Smed_5703 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001314360.1 676658 D 366394 CDS YP_001314361.1 150377766 5320006 677971..678411 1 NC_009621.1 PFAM: dehydroquinase class II; KEGG: rle:pRL110076 putative 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 678411 5320006 Smed_5704 Sinorhizobium medicae WSM419 3-dehydroquinate dehydratase YP_001314361.1 677971 D 366394 CDS YP_001314362.1 150377767 5320007 680781..681185 1 NC_009621.1 PFAM: protein of unknown function DUF1428; KEGG: sme:SMc01560 hypothetical protein; hypothetical protein 681185 5320007 Smed_5705 Sinorhizobium medicae WSM419 hypothetical protein YP_001314362.1 680781 D 366394 CDS YP_001314363.1 150377768 5320008 complement(681388..682029) 1 NC_009621.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rru:Rru_A3712 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 682029 5320008 Smed_5706 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001314363.1 681388 R 366394 CDS YP_001314364.1 150377769 5320010 complement(682565..682900) 1 NC_009621.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rle:RL3232 hypothetical protein; cupin 2 domain-containing protein 682900 5320010 Smed_5708 Sinorhizobium medicae WSM419 cupin 2 domain-containing protein YP_001314364.1 682565 R 366394 CDS YP_001314365.1 150377770 5320011 683053..683583 1 NC_009621.1 PFAM: regulatory protein MarR; KEGG: rle:RL3231 putative MarR family transcriptional regulator; MarR family transcriptional regulator 683583 5320011 Smed_5709 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001314365.1 683053 D 366394 CDS YP_001314366.1 150377771 5320012 complement(683640..684518) 1 NC_009621.1 PFAM: NmrA family protein; KEGG: ade:Adeh_1014 NmrA-like; NmrA family protein 684518 5320012 Smed_5710 Sinorhizobium medicae WSM419 NmrA family protein YP_001314366.1 683640 R 366394 CDS YP_001314367.1 150377772 5320013 complement(684593..684901) 1 NC_009621.1 hypothetical protein 684901 5320013 Smed_5711 Sinorhizobium medicae WSM419 hypothetical protein YP_001314367.1 684593 R 366394 CDS YP_001314368.1 150377773 5320016 complement(686147..687076) 1 NC_009621.1 PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein; integrase catalytic protein 687076 5320016 Smed_5714 Sinorhizobium medicae WSM419 integrase catalytic protein YP_001314368.1 686147 R 366394 CDS YP_001314369.1 150377774 5320017 complement(687070..687336) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein; transposase IS3/IS911 family protein 687336 5320017 Smed_5715 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314369.1 687070 R 366394 CDS YP_001314370.1 150377775 5320018 687866..688072 1 NC_009621.1 KEGG: sme:SMa1700 hypothetical protein; hypothetical protein 688072 5320018 Smed_5716 Sinorhizobium medicae WSM419 hypothetical protein YP_001314370.1 687866 D 366394 CDS YP_001314371.1 150377776 5320019 complement(688268..688537) 1 NC_009621.1 hypothetical protein 688537 5320019 Smed_5717 Sinorhizobium medicae WSM419 hypothetical protein YP_001314371.1 688268 R 366394 CDS YP_001314372.1 150377777 5320020 complement(688527..689000) 1 NC_009621.1 hypothetical protein 689000 5320020 Smed_5718 Sinorhizobium medicae WSM419 hypothetical protein YP_001314372.1 688527 R 366394 CDS YP_001314373.1 150377778 5320021 689424..690701 1 NC_009621.1 PFAM: Epoxide hydrolase domain protein; KEGG: bch:Bcen2424_3503 epoxide hydrolase domain protein; epocide hydrolase domain-containing protein 690701 5320021 Smed_5719 Sinorhizobium medicae WSM419 epocide hydrolase domain-containing protein YP_001314373.1 689424 D 366394 CDS YP_001314374.1 150377779 5320023 complement(692074..693489) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: rme:Rmet_1898 aldehyde dehydrogenase; aldehyde dehydrogenase 693489 5320023 Smed_5721 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001314374.1 692074 R 366394 CDS YP_001314375.1 150377780 5320024 693598..694500 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1632 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 694500 5320024 Smed_5722 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314375.1 693598 D 366394 CDS YP_001314376.1 150377781 5320025 694685..695311 1 NC_009621.1 KEGG: sme:SMc01549 hypothetical protein; hypothetical protein 695311 5320025 Smed_5723 Sinorhizobium medicae WSM419 hypothetical protein YP_001314376.1 694685 D 366394 CDS YP_001314377.1 150377782 5320026 complement(695652..696083) 1 NC_009621.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pde:Pden_3155 methyltransferase type 12; type 11 methyltransferase 696083 5320026 Smed_5724 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001314377.1 695652 R 366394 CDS YP_001314378.1 150377783 5320028 complement(696881..697693) 1 NC_009621.1 KEGG: csa:Csal_1011 beta-lactamase-like protein; beta-lactamase-like protein 697693 5320028 Smed_5726 Sinorhizobium medicae WSM419 beta-lactamase-like protein YP_001314378.1 696881 R 366394 CDS YP_001314379.1 150377784 5320031 698757..700283 1 NC_009621.1 PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pfo:Pfl_2276 transcriptional regulatory protein-like; transcriptional regulator domain-containing protein 700283 5320031 Smed_5729 Sinorhizobium medicae WSM419 transcriptional regulator domain-containing protein YP_001314379.1 698757 D 366394 CDS YP_001314380.1 150377785 5320032 700450..700713 1 NC_009621.1 hypothetical protein 700713 5320032 Smed_5730 Sinorhizobium medicae WSM419 hypothetical protein YP_001314380.1 700450 D 366394 CDS YP_001314381.1 150377786 5320034 complement(701185..701556) 1 NC_009621.1 hypothetical protein 701556 5320034 Smed_5732 Sinorhizobium medicae WSM419 hypothetical protein YP_001314381.1 701185 R 366394 CDS YP_001314382.1 150377787 5320035 702157..702675 1 NC_009621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMa1176 hypothetical protein; GCN5-like N-acetyltransferase 702675 5320035 Smed_5733 Sinorhizobium medicae WSM419 GCN5-like N-acetyltransferase YP_001314382.1 702157 D 366394 CDS YP_001314383.1 150377788 5320040 complement(705316..705777) 1 NC_009621.1 hypothetical protein 705777 5320040 Smed_5738 Sinorhizobium medicae WSM419 hypothetical protein YP_001314383.1 705316 R 366394 CDS YP_001314384.1 150377789 5320041 complement(705823..706515) 1 NC_009621.1 KEGG: rle:pRL100192 hypothetical protein; hypothetical protein 706515 5320041 Smed_5739 Sinorhizobium medicae WSM419 hypothetical protein YP_001314384.1 705823 R 366394 CDS YP_001314385.1 150377790 5320042 complement(706631..707437) 1 NC_009621.1 KEGG: rle:pRL100193 hypothetical protein; hypothetical protein 707437 5320042 Smed_5740 Sinorhizobium medicae WSM419 hypothetical protein YP_001314385.1 706631 R 366394 CDS YP_001314386.1 150377791 5320043 complement(707572..708279) 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A1005 transcriptional regulatory protein; helix-turn-helix domain-containing protein 708279 5320043 Smed_5741 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001314386.1 707572 R 366394 CDS YP_001314387.1 150377792 5320044 complement(708934..710130) 1 NC_009621.1 PFAM: HWE histidine kinase; KEGG: sme:SMa1696 hypothetical protein; signal transduction histidine kinase 710130 5320044 Smed_5742 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001314387.1 708934 R 366394 CDS YP_001314388.1 150377793 5320045 complement(710355..711905) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bld:BLi03843 ribose ABC transporter (ATP-binding protein); RBL02966; ABC transporter-like protein 711905 5320045 Smed_5743 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314388.1 710355 R 366394 CDS YP_001314389.1 150377794 5320046 complement(711895..712866) 1 NC_009621.1 KEGG: sme:SMa0067 putative ABC transporter, periplasmic solute-binding protein; putative ABC transporter, periplasmic solute-binding protein 712866 5320046 Smed_5744 Sinorhizobium medicae WSM419 putative ABC transporter, periplasmic solute-binding protein YP_001314389.1 711895 R 366394 CDS YP_001314390.1 150377795 5320047 complement(712891..713847) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: tte:TTE0764 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; monosaccharide-transporting ATPase 713847 5320047 Smed_5745 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001314390.1 712891 R 366394 CDS YP_001314391.1 150377796 5320048 complement(713853..714623) 1 NC_009621.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sco:SCO0364 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 714623 5320048 Smed_5746 Sinorhizobium medicae WSM419 enoyl-CoA hydratase/isomerase YP_001314391.1 713853 R 366394 CDS YP_001314392.1 150377797 5320049 complement(714631..715782) 1 NC_009621.1 KEGG: sco:SCO0363 putative integral membrane protein; putative integral membrane protein 715782 5320049 Smed_5747 Sinorhizobium medicae WSM419 putative integral membrane protein YP_001314392.1 714631 R 366394 CDS YP_001314393.1 150377798 5320050 complement(715785..716978) 1 NC_009621.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sco:SCO0362 racemase; Formyl-CoA transferase 716978 5320050 Smed_5748 Sinorhizobium medicae WSM419 Formyl-CoA transferase YP_001314393.1 715785 R 366394 CDS YP_001314394.1 150377799 5320051 complement(717011..717805) 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rxy:Rxyl_0531 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 717805 5320051 Smed_5749 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314394.1 717011 R 366394 CDS YP_001314395.1 150377800 5320052 complement(717805..718983) 1 NC_009621.1 KEGG: sco:SCO0366 hypothetical protein; hypothetical protein 718983 5320052 Smed_5750 Sinorhizobium medicae WSM419 hypothetical protein YP_001314395.1 717805 R 366394 CDS YP_001314396.1 150377801 5320053 complement(719079..719993) 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mll1734 hypothetical protein; xylose isomerase domain-containing protein 719993 5320053 Smed_5751 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314396.1 719079 R 366394 CDS YP_001314397.1 150377802 5320054 complement(720016..721104) 1 NC_009621.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mlo:mll1735 hypothetical protein; oxidoreductase domain-containing protein 721104 5320054 Smed_5752 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001314397.1 720016 R 366394 CDS YP_001314398.1 150377803 5320055 721399..722406 1 NC_009621.1 PFAM: regulatory protein LacI; KEGG: bxe:Bxe_B0437 transcriptional regulator, LacI family; regulatory protein LacI 722406 5320055 Smed_5753 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001314398.1 721399 D 366394 CDS YP_001314399.1 150377804 5320057 complement(723756..724145) 1 NC_009621.1 SMART: response regulator receiver; KEGG: sme:SMa2065 hypothetical protein; response regulator receiver protein 724145 5320057 Smed_5755 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314399.1 723756 R 366394 CDS YP_001314400.1 150377805 5320058 complement(724158..725201) 1 NC_009621.1 PFAM: HWE histidine kinase; KEGG: sme:SMa2063 hypothetical protein; signal transduction histidine kinase 725201 5320058 Smed_5756 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001314400.1 724158 R 366394 CDS YP_001314401.1 150377806 5320059 complement(725208..726653) 1 NC_009621.1 PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; KEGG: sme:SMa2061 hypothetical protein; putative circadian clock protein, KaiC 726653 5320059 Smed_5757 Sinorhizobium medicae WSM419 putative circadian clock protein, KaiC YP_001314401.1 725208 R 366394 CDS YP_001314402.1 150377807 5320063 complement(727764..728900) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: mlo:mll5743 hypothetical protein; alpha/beta hydrolase fold protein 728900 5320063 Smed_5761 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001314402.1 727764 R 366394 CDS YP_001314403.1 150377808 5320064 730053..731315 1 NC_009621.1 PFAM: OmpA/MotB domain protein; KEGG: sme:SMa0626 hypothetical protein; OmpA/MotB domain-containing protein 731315 5320064 Smed_5762 Sinorhizobium medicae WSM419 OmpA/MotB domain-containing protein YP_001314403.1 730053 D 366394 CDS YP_001314404.1 150377809 5320065 731312..731524 1 NC_009621.1 KEGG: rle:RL2260 hypothetical protein; hypothetical protein 731524 5320065 Smed_5763 Sinorhizobium medicae WSM419 hypothetical protein YP_001314404.1 731312 D 366394 CDS YP_001314405.1 150377810 5320066 731652..731990 1 NC_009621.1 KEGG: sme:SMa0627 aquaporin Z; glycerol uptake facilitator and related permease (major Intrinsic protein family)-like protein 731990 5320066 Smed_5764 Sinorhizobium medicae WSM419 glycerol uptake facilitator and related permease (major Intrinsic protein family)-like protein YP_001314405.1 731652 D 366394 CDS YP_001314406.1 150377811 5320068 complement(732432..732908) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: atu:Atu4891 IS 426 transposase; transposase IS3/IS911 family protein 732908 5320068 Smed_5766 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314406.1 732432 R 366394 CDS YP_001314407.1 150377812 5320070 733941..735608 1 NC_009621.1 PFAM: sulfatase; KEGG: rle:pRL110221 putative arylsulfatase; sulfatase 735608 5320070 Smed_5768 Sinorhizobium medicae WSM419 sulfatase YP_001314407.1 733941 D 366394 CDS YP_001314408.1 150377813 5320071 735697..736710 1 NC_009621.1 KEGG: sme:SMa1682 NapD-like protein; NapD-like protein 736710 5320071 Smed_5769 Sinorhizobium medicae WSM419 NapD-like protein YP_001314408.1 735697 D 366394 CDS YP_001314409.1 150377814 5320072 737068..739362 1 NC_009621.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMa1680 hypothetical protein; TPR repeat-containing protein 739362 5320072 Smed_5770 Sinorhizobium medicae WSM419 TPR repeat-containing protein YP_001314409.1 737068 D 366394 CDS YP_001314410.1 150377815 5320073 739839..740369 1 NC_009621.1 KEGG: rle:RL2259 hypothetical protein; hypothetical protein 740369 5320073 Smed_5771 Sinorhizobium medicae WSM419 hypothetical protein YP_001314410.1 739839 D 366394 CDS YP_001314411.1 150377816 5320074 740417..742534 1 NC_009621.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMa0937 hypothetical protein; mechanosensitive ion channel MscS 742534 5320074 Smed_5772 Sinorhizobium medicae WSM419 mechanosensitive ion channel MscS YP_001314411.1 740417 D 366394 CDS YP_001314412.1 150377817 5320075 complement(743198..743356) 1 NC_009621.1 hypothetical protein 743356 5320075 Smed_5773 Sinorhizobium medicae WSM419 hypothetical protein YP_001314412.1 743198 R 366394 CDS YP_001314413.1 150377818 5320076 complement(743897..745432) 1 NC_009621.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: sme:SMa1903 putative protease; peptidase S8/S53 subtilisin kexin sedolisin 745432 5320076 Smed_5774 Sinorhizobium medicae WSM419 peptidase S8/S53 subtilisin kexin sedolisin YP_001314413.1 743897 R 366394 CDS YP_001314414.1 150377819 5320077 complement(746167..747222) 1 NC_009621.1 PFAM: CheB methylesterase; KEGG: sme:SMb20514 putative protein-glutamate methyltransferase protein; CheB methylesterase 747222 5320077 Smed_5775 Sinorhizobium medicae WSM419 CheB methylesterase YP_001314414.1 746167 R 366394 CDS YP_001314415.1 150377820 5320078 747465..750947 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sme:SMb20515 putative chemotaxis methyltransferase protein; putative PAS/PAC sensor protein 750947 5320078 Smed_5776 Sinorhizobium medicae WSM419 putative PAS/PAC sensor protein YP_001314415.1 747465 D 366394 CDS YP_001314416.1 150377821 5320079 750931..751341 1 NC_009621.1 KEGG: sme:SMb20516 putative response regulator protein; response regulator receiver protein 751341 5320079 Smed_5777 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314416.1 750931 D 366394 CDS YP_001314417.1 150377822 5320080 complement(751585..752115) 1 NC_009621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ret:RHE_CH02595 probable acetyltransferase protein; GCN5-like N-acetyltransferase 752115 5320080 Smed_5778 Sinorhizobium medicae WSM419 GCN5-like N-acetyltransferase YP_001314417.1 751585 R 366394 CDS YP_001314418.1 150377823 5320081 complement(752214..753623) 1 NC_009621.1 KEGG: mlo:mlr3274 hypothetical protein; hypothetical protein 753623 5320081 Smed_5779 Sinorhizobium medicae WSM419 hypothetical protein YP_001314418.1 752214 R 366394 CDS YP_001314419.1 150377824 5320082 complement(753620..754687) 1 NC_009621.1 KEGG: bam:Bamb_5027 hypothetical protein; hypothetical protein 754687 5320082 Smed_5780 Sinorhizobium medicae WSM419 hypothetical protein YP_001314419.1 753620 R 366394 CDS YP_001314420.1 150377825 5320083 complement(754896..755627) 1 NC_009621.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: ret:RHE_PF00439 transcriptional regulator (activator) protein, LuxR family; response regulator receiver protein 755627 5320083 Smed_5781 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314420.1 754896 R 366394 CDS YP_001314421.1 150377826 5320084 755768..756025 1 NC_009621.1 hypothetical protein 756025 5320084 Smed_5782 Sinorhizobium medicae WSM419 hypothetical protein YP_001314421.1 755768 D 366394 CDS YP_001314422.1 150377827 5320087 complement(756905..757630) 1 NC_009621.1 PFAM: Asp/Glu racemase; KEGG: sme:SMc02427 putative hydantoin racemase protein; Asp/Glu racemase 757630 5320087 Smed_5785 Sinorhizobium medicae WSM419 Asp/Glu racemase YP_001314422.1 756905 R 366394 CDS YP_001314423.1 150377828 5320088 complement(757659..758285) 1 NC_009621.1 KEGG: sme:SMc02426 hypothetical protein; hypothetical protein 758285 5320088 Smed_5786 Sinorhizobium medicae WSM419 hypothetical protein YP_001314423.1 757659 R 366394 CDS YP_001314424.1 150377829 5320089 758422..759099 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc02425 putative transcription regulator protein; GntR family transcriptional regulator 759099 5320089 Smed_5787 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314424.1 758422 D 366394 CDS YP_001314425.1 150377830 5320090 complement(759140..760126) 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc02424 putative oligopeptide transport ATP-binding ABC transporter protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 760126 5320090 Smed_5788 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314425.1 759140 R 366394 CDS YP_001314426.1 150377831 5320091 complement(760123..761106) 1 NC_009621.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc02423 putative oligopeptide transport ATP-binding ABC transporter protein; oligopeptide/dipeptide ABC transporter, ATPase subunit 761106 5320091 Smed_5789 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001314426.1 760123 R 366394 CDS YP_001314427.1 150377832 5320092 complement(761099..762592) 1 NC_009621.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; N-ethylammeline chlorohydrolase 762592 5320092 Smed_5790 Sinorhizobium medicae WSM419 N-ethylammeline chlorohydrolase YP_001314427.1 761099 R 366394 CDS YP_001314428.1 150377833 5320093 complement(762592..763785) 1 NC_009621.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 763785 5320093 Smed_5791 Sinorhizobium medicae WSM419 cytosine deaminase YP_001314428.1 762592 R 366394 CDS YP_001314429.1 150377834 5320094 complement(763791..764741) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02419 putative peptide transport system permease protein; binding-protein-dependent transport systems inner membrane component 764741 5320094 Smed_5792 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314429.1 763791 R 366394 CDS YP_001314430.1 150377835 5320095 complement(764776..765744) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02418 putative peptide transport system permease ABC transporter protein; binding-protein-dependent transport systems inner membrane component 765744 5320095 Smed_5793 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314430.1 764776 R 366394 CDS YP_001314431.1 150377836 5320096 complement(765805..767367) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc02417 putative peptide-binding periplasmic ABC transporter protein; extracellular solute-binding protein 767367 5320096 Smed_5794 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314431.1 765805 R 366394 CDS YP_001314432.1 150377837 5320098 complement(769200..770780) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc02415 putative peptide-binding periplasmic ABC transporter protein; extracellular solute-binding protein 770780 5320098 Smed_5796 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314432.1 769200 R 366394 CDS YP_001314433.1 150377838 5320099 770950..772425 1 NC_009621.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sme:SMc02414 putative hydrolase protein; amidohydrolase 772425 5320099 Smed_5797 Sinorhizobium medicae WSM419 amidohydrolase YP_001314433.1 770950 D 366394 CDS YP_001314434.1 150377839 5320100 772623..773378 1 NC_009621.1 catalyzes the formation of 5-dehydro-D-gluconate from D-gluconate; gluconate 5-dehydrogenase 773378 5320100 Smed_5798 Sinorhizobium medicae WSM419 gluconate 5-dehydrogenase YP_001314434.1 772623 D 366394 CDS YP_001314435.1 150377840 5320101 complement(773415..773687) 1 NC_009621.1 PFAM: WGR domain protein; KEGG: atc:AGR_pAT_bx353 hypothetical protein; WGR domain-containing protein 773687 5320101 Smed_5799 Sinorhizobium medicae WSM419 WGR domain-containing protein YP_001314435.1 773415 R 366394 CDS YP_001314436.1 150377841 5320103 complement(774892..775248) 1 NC_009621.1 KEGG: nha:Nham_4512 hypothetical protein; hypothetical protein 775248 5320103 Smed_5801 Sinorhizobium medicae WSM419 hypothetical protein YP_001314436.1 774892 R 366394 CDS YP_001314437.1 150377842 5320104 complement(775235..775513) 1 NC_009621.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: nha:Nham_4513 prevent-host-death protein; prevent-host-death family protein 775513 5320104 Smed_5802 Sinorhizobium medicae WSM419 prevent-host-death family protein YP_001314437.1 775235 R 366394 CDS YP_001314438.1 150377843 5320106 776061..776366 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: pde:Pden_1547 transcriptional regulator, XRE family; XRE family transcriptional regulator 776366 5320106 Smed_5804 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314438.1 776061 D 366394 CDS YP_001314439.1 150377844 5320107 776359..777600 1 NC_009621.1 PFAM: HipA domain protein; KEGG: pde:Pden_1548 HipA domain protein; HipA domain-containing protein 777600 5320107 Smed_5805 Sinorhizobium medicae WSM419 HipA domain-containing protein YP_001314439.1 776359 D 366394 CDS YP_001314440.1 150377845 5320109 778017..778292 1 NC_009621.1 PFAM: Prophage CP4-57 regulatory; KEGG: mes:Meso_0497 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 778292 5320109 Smed_5807 Sinorhizobium medicae WSM419 phage transcriptional regulator, AlpA YP_001314440.1 778017 D 366394 CDS YP_001314441.1 150377846 5320112 778768..779658 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A3013 putative oxidoreductase, short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 779658 5320112 Smed_5810 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314441.1 778768 D 366394 CDS YP_001314442.1 150377847 5320114 complement(780600..781226) 1 NC_009621.1 KEGG: sme:SMa0985 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 781226 5320114 Smed_5812 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314442.1 780600 R 366394 CDS YP_001314443.1 150377848 5320115 complement(781418..781609) 1 NC_009621.1 hypothetical protein 781609 5320115 Smed_5813 Sinorhizobium medicae WSM419 hypothetical protein YP_001314443.1 781418 R 366394 CDS YP_001314444.1 150377849 5320117 complement(782698..783444) 1 NC_009621.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: pfo:Pfl_2767 NADP oxidoreductase, coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent 783444 5320117 Smed_5815 Sinorhizobium medicae WSM419 NADP oxidoreductase coenzyme F420-dependent YP_001314444.1 782698 R 366394 CDS YP_001314445.1 150377850 5320118 complement(783540..784274) 1 NC_009621.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: pfo:Pfl_2766 NADP oxidoreductase, coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent 784274 5320118 Smed_5816 Sinorhizobium medicae WSM419 NADP oxidoreductase coenzyme F420-dependent YP_001314445.1 783540 R 366394 CDS YP_001314446.1 150377851 5320119 complement(784305..784745) 1 NC_009621.1 PFAM: regulatory protein MarR; KEGG: pst:PSPTO_0818 transcriptional regulator, MarR family; MarR family transcriptional regulator 784745 5320119 Smed_5817 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001314446.1 784305 R 366394 CDS YP_001314447.1 150377852 5320120 complement(785025..785243) 1 NC_009621.1 hypothetical protein 785243 5320120 Smed_5818 Sinorhizobium medicae WSM419 hypothetical protein YP_001314447.1 785025 R 366394 CDS YP_001314448.1 150377853 5320122 786761..787714 1 NC_009621.1 PFAM: beta-lactamase domain protein; KEGG: atc:AGR_L_1113 hypothetical protein; beta-lactamase domain-containing protein 787714 5320122 Smed_5820 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001314448.1 786761 D 366394 CDS YP_001314449.1 150377854 5320123 787837..788589 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sme:SMb20865 hypothetical protein; NmrA family protein 788589 5320123 Smed_5821 Sinorhizobium medicae WSM419 NmrA family protein YP_001314449.1 787837 D 366394 CDS YP_001314450.1 150377855 5320124 788648..789073 1 NC_009621.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMb20864 hypothetical protein; cupin 2 domain-containing protein 789073 5320124 Smed_5822 Sinorhizobium medicae WSM419 cupin 2 domain-containing protein YP_001314450.1 788648 D 366394 CDS YP_001314451.1 150377856 5320125 789144..790181 1 NC_009621.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMb20863 hypothetical protein; mechanosensitive ion channel MscS 790181 5320125 Smed_5823 Sinorhizobium medicae WSM419 mechanosensitive ion channel MscS YP_001314451.1 789144 D 366394 CDS YP_001314452.1 150377857 5320126 complement(790577..791782) 1 NC_009621.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMb20861 putative dehydrogenase, oxidoreductase FAD flavoprotein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 791782 5320126 Smed_5824 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001314452.1 790577 R 366394 CDS YP_001314453.1 150377858 5320127 complement(791897..792727) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMb20860 putative non-heme haloperodidase, possibly chloroperoxidase protein; alpha/beta hydrolase fold protein 792727 5320127 Smed_5825 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001314453.1 791897 R 366394 CDS YP_001314454.1 150377859 5320128 792829..793125 1 NC_009621.1 KEGG: sme:SMb21677 hypothetical exported protein signal peptide; hypothetical protein 793125 5320128 Smed_5826 Sinorhizobium medicae WSM419 hypothetical protein YP_001314454.1 792829 D 366394 CDS YP_001314455.1 150377860 5320129 complement(793149..794099) 1 NC_009621.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMb20859 putative transcriptional regulator, AraC family protein; helix-turn-helix domain-containing protein 794099 5320129 Smed_5827 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001314455.1 793149 R 366394 CDS YP_001314456.1 150377861 5320130 complement(794514..795263) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb20871 putative dehydrogenasereductase, short-chain dehydrogenase/reductase protein; short-chain dehydrogenase/reductase SDR 795263 5320130 Smed_5828 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314456.1 794514 R 366394 CDS YP_001314457.1 150377862 5320131 795360..796256 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20870 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 796256 5320131 Smed_5829 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314457.1 795360 D 366394 CDS YP_001314458.1 150377863 5320132 796253..796699 1 NC_009621.1 hypothetical protein 796699 5320132 Smed_5830 Sinorhizobium medicae WSM419 hypothetical protein YP_001314458.1 796253 D 366394 CDS YP_001314459.1 150377864 5320133 complement(796801..797682) 1 NC_009621.1 PFAM: Aldose 1-epimerase; KEGG: sme:SMa0077 hypothetical protein; aldose 1-epimerase 797682 5320133 Smed_5831 Sinorhizobium medicae WSM419 aldose 1-epimerase YP_001314459.1 796801 R 366394 CDS YP_001314460.1 150377865 5320134 complement(797682..798437) 1 NC_009621.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 798437 fabG 5320134 fabG Sinorhizobium medicae WSM419 3-ketoacyl-(acyl-carrier-protein) reductase YP_001314460.1 797682 R 366394 CDS YP_001314461.1 150377866 5320135 complement(798445..799176) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0072 putative ABC transporter ATP-binding protein; ABC transporter-like protein 799176 5320135 Smed_5833 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314461.1 798445 R 366394 CDS YP_001314462.1 150377867 5320136 complement(799173..800153) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa0070 putative ABC transporter permease; monosaccharide-transporting ATPase 800153 5320136 Smed_5834 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001314462.1 799173 R 366394 CDS YP_001314463.1 150377868 5320137 complement(800292..801266) 1 NC_009621.1 KEGG: sme:SMa0067 putative ABC transporter, periplasmic solute-binding protein; putative ABC transporter, periplasmic solute-binding protein 801266 5320137 Smed_5835 Sinorhizobium medicae WSM419 putative ABC transporter, periplasmic solute-binding protein YP_001314463.1 800292 R 366394 CDS YP_001314464.1 150377869 5320138 complement(801311..802003) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0065 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 802003 5320138 Smed_5836 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314464.1 801311 R 366394 CDS YP_001314465.1 150377870 5320139 complement(802061..803263) 1 NC_009621.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMa0064 hypothetical protein; mandelate racemase/muconate lactonizing protein 803263 5320139 Smed_5837 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001314465.1 802061 R 366394 CDS YP_001314466.1 150377871 5320140 complement(803266..803928) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0063 putative GntR-family transcriptional regulator; GntR domain-containing protein 803928 5320140 Smed_5838 Sinorhizobium medicae WSM419 GntR domain-containing protein YP_001314466.1 803266 R 366394 CDS YP_001314467.1 150377872 5320141 complement(804030..804683) 1 NC_009621.1 KEGG: rsp:RSP_4082 hypothetical protein; hypothetical protein 804683 5320141 Smed_5839 Sinorhizobium medicae WSM419 hypothetical protein YP_001314467.1 804030 R 366394 CDS YP_001314468.1 150377873 5320143 complement(805154..805831) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0062 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 805831 5320143 Smed_5841 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314468.1 805154 R 366394 CDS YP_001314469.1 150377874 5320144 806010..806945 1 NC_009621.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMa0060 putative regucalcin; SMP-30/gluconolaconase/LRE domain-containing protein 806945 5320144 Smed_5842 Sinorhizobium medicae WSM419 SMP-30/gluconolaconase/LRE domain-containing protein YP_001314469.1 806010 D 366394 CDS YP_001314470.1 150377875 5320145 806942..807727 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMa0059 hypothetical protein; short-chain dehydrogenase/reductase SDR 807727 5320145 Smed_5843 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314470.1 806942 D 366394 CDS YP_001314471.1 150377876 5320146 807741..808937 1 NC_009621.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: sme:SMa0058 hypothetical protein; N-acylglucosamine 2-epimerase 808937 5320146 Smed_5844 Sinorhizobium medicae WSM419 N-acylglucosamine 2-epimerase YP_001314471.1 807741 D 366394 CDS YP_001314472.1 150377877 5320147 809136..810383 1 NC_009621.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sus:Acid_2667 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 810383 5320147 Smed_5845 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001314472.1 809136 D 366394 CDS YP_001314473.1 150377878 5320148 complement(810608..811225) 1 NC_009621.1 PFAM: regulatory protein TetR; KEGG: sme:SMa0190 hypothetical protein; TetR family transcriptional regulator 811225 5320148 Smed_5846 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001314473.1 810608 R 366394 CDS YP_001314474.1 150377879 5320149 811463..811792 1 NC_009621.1 KEGG: nfa:nfa27470 hypothetical protein; hypothetical protein 811792 5320149 Smed_5847 Sinorhizobium medicae WSM419 hypothetical protein YP_001314474.1 811463 D 366394 CDS YP_001314475.1 150377880 5320150 811789..812295 1 NC_009621.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pau:PA14_53810 hypothetical protein; activator of Hsp90 ATPase 1 family protein 812295 5320150 Smed_5848 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001314475.1 811789 D 366394 CDS YP_001314476.1 150377881 5320151 812440..812724 1 NC_009621.1 KEGG: sme:SMa0044 hypothetical protein; hypothetical protein 812724 5320151 Smed_5849 Sinorhizobium medicae WSM419 hypothetical protein YP_001314476.1 812440 D 366394 CDS YP_001314477.1 150377882 5320152 complement(812801..813787) 1 NC_009621.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMa0041 probable quinone oxidoreductase; alcohol dehydrogenase 813787 5320152 Smed_5850 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001314477.1 812801 R 366394 CDS YP_001314478.1 150377883 5320153 813889..814788 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0039 probable LysR-family protein; LysR family transcriptional regulator 814788 5320153 Smed_5851 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314478.1 813889 D 366394 CDS YP_001314479.1 150377884 5320154 complement(814914..815129) 1 NC_009621.1 KEGG: sme:SMc01337 hypothetical/unknown protein; hypothetical protein 815129 5320154 Smed_5852 Sinorhizobium medicae WSM419 hypothetical protein YP_001314479.1 814914 R 366394 CDS YP_001314480.1 150377885 5320155 complement(815252..816439) 1 NC_009621.1 PFAM: creatinase; peptidase M24; KEGG: sme:SMa1329 putative proline dipeptidase; peptidase M24 816439 5320155 Smed_5853 Sinorhizobium medicae WSM419 peptidase M24 YP_001314480.1 815252 R 366394 CDS YP_001314481.1 150377886 5320156 complement(816465..816878) 1 NC_009621.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMa1331 hypothetical protein; cupin 2 domain-containing protein 816878 5320156 Smed_5854 Sinorhizobium medicae WSM419 cupin 2 domain-containing protein YP_001314481.1 816465 R 366394 CDS YP_001314482.1 150377887 5320157 complement(816912..817754) 1 NC_009621.1 KEGG: sme:SMa1332 hypothetical protein; hypothetical protein 817754 5320157 Smed_5855 Sinorhizobium medicae WSM419 hypothetical protein YP_001314482.1 816912 R 366394 CDS YP_001314483.1 150377888 5320158 complement(817766..818962) 1 NC_009621.1 PFAM: protein of unknown function UPF0261; KEGG: sme:SMa1334 hypothetical protein; hypothetical protein 818962 5320158 Smed_5856 Sinorhizobium medicae WSM419 hypothetical protein YP_001314483.1 817766 R 366394 CDS YP_001314484.1 150377889 5320159 819044..819706 1 NC_009621.1 PFAM: regulatory protein TetR; KEGG: ret:RHE_PF00373 probable transcriptional regulator protein, TetR family; TetR family transcriptional regulator 819706 5320159 Smed_5857 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001314484.1 819044 D 366394 CDS YP_001314485.1 150377890 5320160 820037..821344 1 NC_009621.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMa1337 putative sugar ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 821344 5320160 Smed_5858 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314485.1 820037 D 366394 CDS YP_001314486.1 150377891 5320161 821512..822417 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1339 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 822417 5320161 Smed_5859 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314486.1 821512 D 366394 CDS YP_001314487.1 150377892 5320162 822419..823378 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1341 probable ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 823378 5320162 Smed_5860 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314487.1 822419 D 366394 CDS YP_001314488.1 150377893 5320163 823375..823578 1 NC_009621.1 hypothetical protein 823578 5320163 Smed_5861 Sinorhizobium medicae WSM419 hypothetical protein YP_001314488.1 823375 D 366394 CDS YP_001314489.1 150377894 5320164 823575..824684 1 NC_009621.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa1344 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 824684 5320164 Smed_5862 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314489.1 823575 D 366394 CDS YP_001314490.1 150377895 5320165 824684..825760 1 NC_009621.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa1345 probable ABC transporter ATP-binding protein; ABC transporter-like protein 825760 5320165 Smed_5863 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314490.1 824684 D 366394 CDS YP_001314491.1 150377896 5320166 complement(825905..826879) 1 NC_009621.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMa1347 putative phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 826879 5320166 Smed_5864 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001314491.1 825905 R 366394 CDS YP_001314492.1 150377897 5320167 complement(826902..827594) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa1349 putative GntR-family transcriptional regulator; GntR domain-containing protein 827594 5320167 Smed_5865 Sinorhizobium medicae WSM419 GntR domain-containing protein YP_001314492.1 826902 R 366394 CDS YP_001314493.1 150377898 5320168 complement(827597..828766) 1 NC_009621.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ret:RHE_PF00381 putative mandelate racemase protein; mandelate racemase/muconate lactonizing protein 828766 5320168 Smed_5866 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001314493.1 827597 R 366394 CDS YP_001314494.1 150377899 5320169 complement(828824..829711) 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMa1353 putative epimerase; xylose isomerase domain-containing protein 829711 5320169 Smed_5867 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314494.1 828824 R 366394 CDS YP_001314495.1 150377900 5320170 830028..830879 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMa1354 putative epimerase; xylose isomerase domain-containing protein 830879 5320170 Smed_5868 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314495.1 830028 D 366394 CDS YP_001314496.1 150377901 5320171 complement(831026..831673) 1 NC_009621.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMa1497 putative Gst12 glutathione-S-transferase; glutathione S-transferase domain-containing protein 831673 5320171 Smed_5869 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001314496.1 831026 R 366394 CDS YP_001314497.1 150377902 5320172 complement(831684..833450) 1 NC_009621.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Rieske [2Fe-2S] domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMa1500 putative oxidoreductase/oxygenase; ferredoxin 833450 5320172 Smed_5870 Sinorhizobium medicae WSM419 ferredoxin YP_001314497.1 831684 R 366394 CDS YP_001314498.1 150377903 5320173 complement(833475..834380) 1 NC_009621.1 KEGG: sme:SMa1501 hypothetical protein; hypothetical protein 834380 5320173 Smed_5871 Sinorhizobium medicae WSM419 hypothetical protein YP_001314498.1 833475 R 366394 CDS YP_001314499.1 150377904 5320174 834719..835486 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa1505 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 835486 5320174 Smed_5872 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314499.1 834719 D 366394 CDS YP_001314500.1 150377905 5320175 835540..836634 1 NC_009621.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMa1507 hypothetical protein; basic membrane lipoprotein 836634 5320175 Smed_5873 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001314500.1 835540 D 366394 CDS YP_001314501.1 150377906 5320176 836723..838258 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1509 probable ATP transporter, ATP-binding protein; ABC transporter-like protein 838258 5320176 Smed_5874 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314501.1 836723 D 366394 CDS YP_001314502.1 150377907 5320177 838242..839309 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa1513 putative ABC transporter permease; inner-membrane translocator 839309 5320177 Smed_5875 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314502.1 838242 D 366394 CDS YP_001314503.1 150377908 5320178 839309..840229 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMa1514 putative ABC transporter permease; inner-membrane translocator 840229 5320178 Smed_5876 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001314503.1 839309 D 366394 CDS YP_001314504.1 150377909 5320179 840260..841042 1 NC_009621.1 PFAM: DNA polymerase beta domain protein region; KEGG: pde:Pden_4803 adenylyltransferase; streptomycin 3''-adenylyltransferase 841042 5320179 Smed_5877 Sinorhizobium medicae WSM419 streptomycin 3''-adenylyltransferase YP_001314504.1 840260 D 366394 CDS YP_001314505.1 150377910 5320180 complement(841082..842254) 1 NC_009621.1 PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mll7282 similar to multidrug-efflux transporter; major facilitator transporter 842254 5320180 Smed_5878 Sinorhizobium medicae WSM419 major facilitator transporter YP_001314505.1 841082 R 366394 CDS YP_001314506.1 150377911 5320181 842303..842863 1 NC_009621.1 PFAM: regulatory protein AsnC/Lrp family; LexA DNA-binding domain protein; KEGG: mlo:mlr7283 transcriptional regulator; AsnC family transcriptional regulator 842863 5320181 Smed_5879 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001314506.1 842303 D 366394 CDS YP_001314507.1 150377912 5320182 complement(842876..844006) 1 NC_009621.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: atc:AGR_pAT_5 hypothetical protein; FAD dependent oxidoreductase 844006 5320182 Smed_5880 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314507.1 842876 R 366394 CDS YP_001314508.1 150377913 5320183 complement(844062..845570) 1 NC_009621.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_9 glutamine transport system permease proetin / ATP-binding proetin; polar amino acid ABC transporter, inner membrane subunit 845570 5320183 Smed_5881 Sinorhizobium medicae WSM419 polar amino acid ABC transporter, inner membrane subunit YP_001314508.1 844062 R 366394 CDS YP_001314509.1 150377914 5320184 complement(845745..846581) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 3; KEGG: atc:AGR_pAT_12 GlnH homolog; extracellular solute-binding protein 846581 5320184 Smed_5882 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314509.1 845745 R 366394 CDS YP_001314510.1 150377915 5320185 846809..847879 1 NC_009621.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_pAT_13 transcriptional repressor; periplasmic binding protein/LacI transcriptional regulator 847879 5320185 Smed_5883 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001314510.1 846809 D 366394 CDS YP_001314511.1 150377916 5320186 848021..848815 1 NC_009621.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: eca:ECA2152 hypothetical protein; type 11 methyltransferase 848815 5320186 Smed_5884 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001314511.1 848021 D 366394 CDS YP_001314512.1 150377917 5320187 848915..849895 1 NC_009621.1 PFAM: putative sugar-binding domain protein; KEGG: sme:SMb20619 putative regulatory protein; DeoR family transcriptional regulator 849895 5320187 Smed_5885 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001314512.1 848915 D 366394 CDS YP_001314513.1 150377918 5320188 complement(849926..850966) 1 NC_009621.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20620 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; periplasmic binding protein/LacI transcriptional regulator 850966 5320188 Smed_5886 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001314513.1 849926 R 366394 CDS YP_001314514.1 150377919 5320189 complement(851017..852063) 1 NC_009621.1 PFAM: inner-membrane translocator; KEGG: sme:SMb20621 putative sugar uptake ABC transporter permease protein; monosaccharide-transporting ATPase 852063 5320189 Smed_5887 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001314514.1 851017 R 366394 CDS YP_001314515.1 150377920 5320190 complement(852060..853616) 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20622 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein 853616 5320190 Smed_5888 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314515.1 852060 R 366394 CDS YP_001314516.1 150377921 5320191 853707..854996 1 NC_009621.1 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 854996 mtnK 5320191 mtnK Sinorhizobium medicae WSM419 methylthioribose kinase YP_001314516.1 853707 D 366394 CDS YP_001314517.1 150377922 5320192 854993..856087 1 NC_009621.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 856087 mtnA 5320192 mtnA Sinorhizobium medicae WSM419 methylthioribose-1-phosphate isomerase YP_001314517.1 854993 D 366394 CDS YP_001314518.1 150377923 5320193 complement(856144..857031) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa2341 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 857031 5320193 Smed_5891 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314518.1 856144 R 366394 CDS YP_001314519.1 150377924 5320194 857131..857853 1 NC_009621.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa2343 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 857853 5320194 Smed_5892 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314519.1 857131 D 366394 CDS YP_001314520.1 150377925 5320195 857980..858309 1 NC_009621.1 KEGG: hne:HNE_0020 hypothetical protein; hypothetical protein 858309 5320195 Smed_5893 Sinorhizobium medicae WSM419 hypothetical protein YP_001314520.1 857980 D 366394 CDS YP_001314521.1 150377926 5320196 858405..859925 1 NC_009621.1 PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: sme:SMc02428 putative oxidoreductase protein; FAD dependent oxidoreductase 859925 5320196 Smed_5894 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314521.1 858405 D 366394 CDS YP_001314522.1 150377927 5320197 860073..861143 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: mlo:mlr9681 sensory transduction histidine kinase; signal transduction histidine kinase 861143 5320197 Smed_5895 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001314522.1 860073 D 366394 CDS YP_001314523.1 150377928 5320198 complement(861207..862232) 1 NC_009621.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMa2069 probable ABC transporter, sulfate-binding protein; sulfate ABC transporter, periplasmic sulfate-binding protein 862232 5320198 Smed_5896 Sinorhizobium medicae WSM419 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001314523.1 861207 R 366394 CDS YP_001314524.1 150377929 5320199 complement(862382..862969) 1 NC_009621.1 KEGG: sme:SMa2299 hypothetical protein; hypothetical protein 862969 5320199 Smed_5897 Sinorhizobium medicae WSM419 hypothetical protein YP_001314524.1 862382 R 366394 CDS YP_001314525.1 150377930 5320200 863062..863241 1 NC_009621.1 hypothetical protein 863241 5320200 Smed_5898 Sinorhizobium medicae WSM419 hypothetical protein YP_001314525.1 863062 D 366394 CDS YP_001314526.1 150377931 5320201 complement(863309..864523) 1 NC_009621.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sme:SMb21550 hypothetical protein; hypothetical protein 864523 5320201 Smed_5899 Sinorhizobium medicae WSM419 hypothetical protein YP_001314526.1 863309 R 366394 CDS YP_001314527.1 150377932 5320202 complement(864541..865452) 1 NC_009621.1 PFAM: Rhodanese domain protein; KEGG: sme:SMb21549 putative exported sulfurtransferase, rhodanese protein; rhodanese domain-containing protein 865452 5320202 Smed_5900 Sinorhizobium medicae WSM419 rhodanese domain-containing protein YP_001314527.1 864541 R 366394 CDS YP_001314528.1 150377933 5320203 865787..867856 1 NC_009621.1 PFAM: UvrD/REP helicase; KEGG: sme:SMa2321 putative UvrD2 DNA helicase; UvrD/REP helicase 867856 5320203 Smed_5901 Sinorhizobium medicae WSM419 UvrD/REP helicase YP_001314528.1 865787 D 366394 CDS YP_001314529.1 150377934 5320204 complement(867886..868809) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2331 transcriptional regulator, LysR family; LysR family transcriptional regulator 868809 5320204 Smed_5902 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314529.1 867886 R 366394 CDS YP_001314530.1 150377935 5320205 868905..869891 1 NC_009621.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: vei:Veis_2905 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 869891 5320205 Smed_5903 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001314530.1 868905 D 366394 CDS YP_001314531.1 150377936 5320206 869899..870612 1 NC_009621.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bpa:BPP1802 hypothetical protein; dimethylmenaquinone methyltransferase 870612 5320206 Smed_5904 Sinorhizobium medicae WSM419 dimethylmenaquinone methyltransferase YP_001314531.1 869899 D 366394 CDS YP_001314532.1 150377937 5320207 870674..871651 1 NC_009621.1 PFAM: Uncharacterized protein UPF0065; KEGG: sme:SMb20724 putative tricarboxylic transport membrane protein; hypothetical protein 871651 5320207 Smed_5905 Sinorhizobium medicae WSM419 hypothetical protein YP_001314532.1 870674 D 366394 CDS YP_001314533.1 150377938 5320208 871648..872130 1 NC_009621.1 KEGG: atc:AGR_C_4484 putative tricarboxylic transport membrane protein; putative tricarboxylic transport membrane protein 872130 5320208 Smed_5906 Sinorhizobium medicae WSM419 putative tricarboxylic transport membrane protein YP_001314533.1 871648 D 366394 CDS YP_001314534.1 150377939 5320209 872130..873632 1 NC_009621.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: dge:Dgeo_0831 protein of unknown function DUF112, transmembrane; hypothetical protein 873632 5320209 Smed_5907 Sinorhizobium medicae WSM419 hypothetical protein YP_001314534.1 872130 D 366394 CDS YP_001314535.1 150377940 5320210 873654..874700 1 NC_009621.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: oih:OB2846 malate dehydrogenase; malate/L-lactate dehydrogenase 874700 5320210 Smed_5908 Sinorhizobium medicae WSM419 malate/L-lactate dehydrogenase YP_001314535.1 873654 D 366394 CDS YP_001314536.1 150377941 5320211 complement(874761..875258) 1 NC_009621.1 PFAM: globin; KEGG: sme:SMc02351 hypothetical protein; globin 875258 5320211 Smed_5909 Sinorhizobium medicae WSM419 globin YP_001314536.1 874761 R 366394 CDS YP_001314537.1 150377942 5320212 875397..876194 1 NC_009621.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rsp:RSP_0949 putative trehalose-6-phosphate phosphatase; HAD family hydrolase 876194 5320212 Smed_5910 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001314537.1 875397 D 366394 CDS YP_001314538.1 150377943 5320213 876240..877643 1 NC_009621.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; KEGG: sme:SMa0233 probable OtsA trehalose-6-phosphate synthase; alpha,alpha-trehalose-phosphate synthase 877643 5320213 Smed_5911 Sinorhizobium medicae WSM419 alpha,alpha-trehalose-phosphate synthase YP_001314538.1 876240 D 366394 CDS YP_001314539.1 150377944 5320214 877837..879519 1 NC_009621.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa0036 putative ABC transporter ATP-binding protein; ABC transporter-like protein 879519 5320214 Smed_5912 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314539.1 877837 D 366394 CDS YP_001314540.1 150377945 5320216 complement(880576..881166) 1 NC_009621.1 KEGG: mbb:BCG_0404c hypothetical protein; hypothetical protein 881166 5320216 Smed_5914 Sinorhizobium medicae WSM419 hypothetical protein YP_001314540.1 880576 R 366394 CDS YP_001314541.1 150377946 5320217 complement(881163..881519) 1 NC_009621.1 KEGG: hch:HCH_00187 hypothetical protein; hypothetical protein 881519 5320217 Smed_5915 Sinorhizobium medicae WSM419 hypothetical protein YP_001314541.1 881163 R 366394 CDS YP_001314542.1 150377947 5320219 complement(882320..882592) 1 NC_009621.1 KEGG: sme:SMa1201 hypothetical protein; hypothetical protein 882592 5320219 Smed_5917 Sinorhizobium medicae WSM419 hypothetical protein YP_001314542.1 882320 R 366394 CDS YP_001314543.1 150377948 5320220 complement(882737..883048) 1 NC_009621.1 KEGG: rle:RL0531 putative transmembrane protein; putative transmembrane protein 883048 5320220 Smed_5918 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001314543.1 882737 R 366394 CDS YP_001314544.1 150377949 5320221 complement(883032..883295) 1 NC_009621.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sme:SMa0622 FixS2 nitrogen fixation protein; cytochrome oxidase maturation protein, cbb3-type 883295 5320221 Smed_5919 Sinorhizobium medicae WSM419 cytochrome oxidase maturation protein, cbb3-type YP_001314544.1 883032 R 366394 CDS YP_001314545.1 150377950 5320222 complement(883292..885559) 1 NC_009621.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sme:SMa0621 FixI2 E1-E2 type cation ATPase; copper-translocating P-type ATPase 885559 5320222 Smed_5920 Sinorhizobium medicae WSM419 copper-translocating P-type ATPase YP_001314545.1 883292 R 366394 CDS YP_001314546.1 150377951 5320223 complement(885562..886368) 1 NC_009621.1 KEGG: sme:SMa0620 hypothetical protein; hypothetical protein 886368 5320223 Smed_5921 Sinorhizobium medicae WSM419 hypothetical protein YP_001314546.1 885562 R 366394 CDS YP_001314547.1 150377952 5320224 complement(886396..886587) 1 NC_009621.1 hypothetical protein 886587 5320224 Smed_5922 Sinorhizobium medicae WSM419 hypothetical protein YP_001314547.1 886396 R 366394 CDS YP_001314548.1 150377953 5320225 complement(886587..887468) 1 NC_009621.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sme:SMa0617 FixP3 cytochrome c oxidase membrane anchored subunit; cytochrome c oxidase, cbb3-type subunit III 887468 5320225 Smed_5923 Sinorhizobium medicae WSM419 cytochrome c oxidase, cbb3-type subunit III YP_001314548.1 886587 R 366394 CDS YP_001314549.1 150377954 5320226 complement(887459..887629) 1 NC_009621.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: sme:SMa0616 FixQ3 nitrogen fixation protein; Cbb3-type cytochrome oxidase component 887629 5320226 Smed_5924 Sinorhizobium medicae WSM419 Cbb3-type cytochrome oxidase component YP_001314549.1 887459 R 366394 CDS YP_001314550.1 150377955 5320227 complement(887651..888403) 1 NC_009621.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 888403 5320227 Smed_5925 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit II YP_001314550.1 887651 R 366394 CDS YP_001314551.1 150377956 5320228 complement(888408..890081) 1 NC_009621.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 890081 5320228 Smed_5926 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit I YP_001314551.1 888408 R 366394 CDS YP_001314552.1 150377957 5320229 complement(890465..891145) 1 NC_009621.1 PFAM: cyclic nucleotide-binding; KEGG: sme:SMa1207 FixK-like regulatory protein; cyclic nucleotide-binding protein 891145 5320229 Smed_5927 Sinorhizobium medicae WSM419 cyclic nucleotide-binding protein YP_001314552.1 890465 R 366394 CDS YP_001314553.1 150377958 5320230 complement(891175..891381) 1 NC_009621.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sme:SMa1208 FixS1 nitrogen fixation protein; cytochrome oxidase maturation protein, cbb3-type 891381 5320230 Smed_5928 Sinorhizobium medicae WSM419 cytochrome oxidase maturation protein, cbb3-type YP_001314553.1 891175 R 366394 CDS YP_001314554.1 150377959 5320231 complement(891378..893651) 1 NC_009621.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sme:SMa1209 FixI1 copper transport ATPase; copper-translocating P-type ATPase 893651 5320231 Smed_5929 Sinorhizobium medicae WSM419 copper-translocating P-type ATPase YP_001314554.1 891378 R 366394 CDS YP_001314555.1 150377960 5320232 complement(893648..894151) 1 NC_009621.1 PFAM: FixH family protein; KEGG: sme:SMa1210 FixH nitrogen fixation protein; FixH family protein 894151 5320232 Smed_5930 Sinorhizobium medicae WSM419 FixH family protein YP_001314555.1 893648 R 366394 CDS YP_001314556.1 150377961 5320233 complement(894148..895722) 1 NC_009621.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; KEGG: sme:SMa1211 FixG iron sulfur membrane protein; cytochrome c oxidase cbb3 type accessory protein FixG 895722 5320233 Smed_5931 Sinorhizobium medicae WSM419 cytochrome c oxidase cbb3 type accessory protein FixG YP_001314556.1 894148 R 366394 CDS YP_001314557.1 150377962 5320234 complement(895946..896815) 1 NC_009621.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sme:SMa1213 FixP1 Di-heme cytochrome c; cytochrome c oxidase, cbb3-type subunit III 896815 5320234 Smed_5932 Sinorhizobium medicae WSM419 cytochrome c oxidase, cbb3-type subunit III YP_001314557.1 895946 R 366394 CDS YP_001314558.1 150377963 5320235 complement(896819..896971) 1 NC_009621.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: sme:SMa1214 FixQ1 cbb3-type cytochrome oxidase; Cbb3-type cytochrome oxidase component 896971 5320235 Smed_5933 Sinorhizobium medicae WSM419 Cbb3-type cytochrome oxidase component YP_001314558.1 896819 R 366394 CDS YP_001314559.1 150377964 5320236 complement(896984..897715) 1 NC_009621.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 897715 5320236 Smed_5934 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit II YP_001314559.1 896984 R 366394 CDS YP_001314560.1 150377965 5320237 complement(897729..899348) 1 NC_009621.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 899348 5320237 Smed_5935 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit I YP_001314560.1 897729 R 366394 CDS YP_001314561.1 150377966 5320239 complement(899948..900295) 1 NC_009621.1 KEGG: sme:SMa0760 FixT2 transcription regulator; response regulator receiver protein 900295 5320239 Smed_5937 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314561.1 899948 R 366394 CDS YP_001314562.1 150377967 5320240 complement(900506..901186) 1 NC_009621.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMa0753 hypothetical protein with localized conservation; flavin reductase domain-containing protein 901186 5320240 Smed_5938 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001314562.1 900506 R 366394 CDS YP_001314563.1 150377968 5320241 join(901806..902135,902135..902605) 1 NC_009621.1 KEGG: rle:pRL100167 putative transposase; hypothetical protein 902605 5320241 Smed_5939 Sinorhizobium medicae WSM419 hypothetical protein YP_001314563.1 901806 D 366394 CDS YP_001314564.1 150377969 5320242 complement(902866..903954) 1 NC_009621.1 KEGG: nha:Nham_4600 feruloyl esterase; feruloyl esterase 903954 5320242 Smed_5940 Sinorhizobium medicae WSM419 feruloyl esterase YP_001314564.1 902866 R 366394 CDS YP_001314565.1 150377970 5320243 complement(904243..905169) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0757 NodD2 nod box-dependent transcription activator; LysR family transcriptional regulator 905169 5320243 Smed_5941 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314565.1 904243 R 366394 CDS YP_001314566.1 150377971 5320247 906966..907238 1 NC_009621.1 hypothetical protein 907238 5320247 Smed_5945 Sinorhizobium medicae WSM419 hypothetical protein YP_001314566.1 906966 D 366394 CDS YP_001314567.1 150377972 5320248 907235..907579 1 NC_009621.1 hypothetical protein 907579 5320248 Smed_5946 Sinorhizobium medicae WSM419 hypothetical protein YP_001314567.1 907235 D 366394 CDS YP_001314568.1 150377973 5320250 complement(909344..910120) 1 NC_009621.1 PFAM: LysR substrate-binding; KEGG: rle:pRL120548 putative LysR family transcriptional regulator; LysR family transcriptional regulator 910120 5320250 Smed_5948 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314568.1 909344 R 366394 CDS YP_001314569.1 150377974 5320252 complement(910567..911946) 1 NC_009621.1 PFAM: virulence factor family protein; KEGG: atc:AGR_C_4582 virulence gene acvB product; virulence factor family protein 911946 5320252 Smed_5950 Sinorhizobium medicae WSM419 virulence factor family protein YP_001314569.1 910567 R 366394 CDS YP_001314570.1 150377975 5320253 complement(911943..914552) 1 NC_009621.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: sme:SMc00611 hypothetical transmembrane protein; hypothetical protein 914552 5320253 Smed_5951 Sinorhizobium medicae WSM419 hypothetical protein YP_001314570.1 911943 R 366394 CDS YP_001314571.1 150377976 5320254 complement(914865..915932) 1 NC_009621.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rpa:RPA2432 putative signal transduction histidine kinase with response regulator receiver domain; signal transduction histidine kinase 915932 5320254 Smed_5952 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001314571.1 914865 R 366394 CDS YP_001314572.1 150377977 5320255 complement(915932..916369) 1 NC_009621.1 PFAM: response regulator receiver; KEGG: rpc:RPC_2871 response regulator receiver domain protein (CheY-like); response regulator receiver protein 916369 5320255 Smed_5953 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001314572.1 915932 R 366394 CDS YP_001314573.1 150377978 5320256 complement(916362..917861) 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpd:RPD_2430 ATP-binding region, ATPase-like; integral membrane sensor signal transduction histidine kinase 917861 5320256 Smed_5954 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001314573.1 916362 R 366394 CDS YP_001314574.1 150377979 5320258 919639..921036 1 NC_009621.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mca:MCA2474 sigma-54 dependent DNA-binding response regulator; two component, sigma54 specific, Fis family transcriptional regulator 921036 5320258 Smed_5956 Sinorhizobium medicae WSM419 two component, sigma54 specific, Fis family transcriptional regulator YP_001314574.1 919639 D 366394 CDS YP_001314575.1 150377980 5320259 921261..922094 1 NC_009621.1 PFAM: protein of unknown function DUF1614; KEGG: mtp:Mthe_0756 protein of unknown function DUF1614; hypothetical protein 922094 5320259 Smed_5957 Sinorhizobium medicae WSM419 hypothetical protein YP_001314575.1 921261 D 366394 CDS YP_001314576.1 150377981 5320260 922185..922793 1 NC_009621.1 PFAM: protein of unknown function DUF1003; KEGG: mlo:mlr0821 hypothetical protein; hypothetical protein 922793 5320260 Smed_5958 Sinorhizobium medicae WSM419 hypothetical protein YP_001314576.1 922185 D 366394 CDS YP_001314577.1 150377982 5320261 923084..923464 1 NC_009621.1 hypothetical protein 923464 5320261 Smed_5959 Sinorhizobium medicae WSM419 hypothetical protein YP_001314577.1 923084 D 366394 CDS YP_001314578.1 150377983 5320262 923465..923794 1 NC_009621.1 KEGG: mlo:mlr8178 hypothetical protein; hypothetical protein 923794 5320262 Smed_5960 Sinorhizobium medicae WSM419 hypothetical protein YP_001314578.1 923465 D 366394 CDS YP_001314579.1 150377984 5320263 923927..924187 1 NC_009621.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: rle:pRL120675 hypothetical protein; CopG family transcriptional regulator 924187 5320263 Smed_5961 Sinorhizobium medicae WSM419 CopG family transcriptional regulator YP_001314579.1 923927 D 366394 CDS YP_001314580.1 150377985 5320266 926572..926895 1 NC_009621.1 KEGG: eli:ELI_14595 hypothetical protein; hypothetical protein 926895 5320266 Smed_5964 Sinorhizobium medicae WSM419 hypothetical protein YP_001314580.1 926572 D 366394 CDS YP_001314581.1 150377986 5320268 complement(927094..927468) 1 NC_009621.1 KEGG: mlo:mlr9230 hypothetical protein; hypothetical protein 927468 5320268 Smed_5966 Sinorhizobium medicae WSM419 hypothetical protein YP_001314581.1 927094 R 366394 CDS YP_001314582.1 150377987 5320269 927738..927989 1 NC_009621.1 PFAM: WGR domain protein; KEGG: rle:pRL100216 hypothetical protein; WGR domain-containing protein 927989 5320269 Smed_5967 Sinorhizobium medicae WSM419 WGR domain-containing protein YP_001314582.1 927738 D 366394 CDS YP_001314583.1 150377988 5320272 complement(928849..929574) 1 NC_009621.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: hch:HCH_02020 predicted transcriptional regulator; helix-turn-helix type 11 domain-containing protein 929574 5320272 Smed_5970 Sinorhizobium medicae WSM419 helix-turn-helix type 11 domain-containing protein YP_001314583.1 928849 R 366394 CDS YP_001314584.1 150377989 5320273 929726..931201 1 NC_009621.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: pfl:PFL_2854 lipoprotein, putative; hypothetical protein 931201 5320273 Smed_5971 Sinorhizobium medicae WSM419 hypothetical protein YP_001314584.1 929726 D 366394 CDS YP_001314585.1 150377990 5320274 931404..931541 1 NC_009621.1 hypothetical protein 931541 5320274 Smed_5972 Sinorhizobium medicae WSM419 hypothetical protein YP_001314585.1 931404 D 366394 CDS YP_001314586.1 150377991 5320278 933359..934210 1 NC_009621.1 KEGG: nwi:Nwi_2847 probable ISRm2011-2 transposase protein; transposase 934210 5320278 Smed_5976 Sinorhizobium medicae WSM419 transposase YP_001314586.1 933359 D 366394 CDS YP_001314587.1 150377992 5320279 complement(934253..934933) 1 NC_009621.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMa0753 hypothetical protein with localized conservation; flavin reductase domain-containing protein 934933 5320279 Smed_5977 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001314587.1 934253 R 366394 CDS YP_001314588.1 150377993 5320280 complement(935242..936336) 1 NC_009621.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMa0752 possible dioxygenase reductase subunit; ferredoxin 936336 5320280 Smed_5978 Sinorhizobium medicae WSM419 ferredoxin YP_001314588.1 935242 R 366394 CDS YP_001314589.1 150377994 5320281 complement(936308..937546) 1 NC_009621.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMa0751 putative aromatic-ring hydroxylating dioxygenase, alpha-subunit; Rieske (2Fe-2S) domain-containing protein 937546 5320281 Smed_5979 Sinorhizobium medicae WSM419 Rieske (2Fe-2S) domain-containing protein YP_001314589.1 936308 R 366394 CDS YP_001314590.1 150377995 5320282 937694..938572 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0750 probable LysR-family transcriptional activator; LysR family transcriptional regulator 938572 5320282 Smed_5980 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314590.1 937694 D 366394 CDS YP_001314591.1 150377996 5320284 complement(939019..939309) 1 NC_009621.1 KEGG: rle:RL1148 hypothetical protein; hypothetical protein 939309 5320284 Smed_5982 Sinorhizobium medicae WSM419 hypothetical protein YP_001314591.1 939019 R 366394 CDS YP_001314592.1 150377997 5320285 939549..939938 1 NC_009621.1 hypothetical protein 939938 5320285 Smed_5983 Sinorhizobium medicae WSM419 hypothetical protein YP_001314592.1 939549 D 366394 CDS YP_001314593.1 150377998 5320287 941255..942697 1 NC_009621.1 PFAM: glycoside hydrolase 15-related; KEGG: ret:RHE_PF00442 putative glucoamylase protein; glucan 1,4-alpha-glucosidase 942697 5320287 Smed_5985 Sinorhizobium medicae WSM419 glucan 1,4-alpha-glucosidase YP_001314593.1 941255 D 366394 CDS YP_001314594.1 150377999 5320288 942790..944661 1 NC_009621.1 KEGG: ret:RHE_PF00443 putative dehydrogenase large subunit protein; putative dehydrogenase large subunit protein 944661 5320288 Smed_5986 Sinorhizobium medicae WSM419 putative dehydrogenase large subunit protein YP_001314594.1 942790 D 366394 CDS YP_001314595.1 150378000 5320289 944753..945865 1 NC_009621.1 KEGG: ret:RHE_PF00444 hypothetical protein; hypothetical protein 945865 5320289 Smed_5987 Sinorhizobium medicae WSM419 hypothetical protein YP_001314595.1 944753 D 366394 CDS YP_001314596.1 150378001 5320290 945862..946341 1 NC_009621.1 KEGG: ret:RHE_PF00445 hypothetical protein; hypothetical protein 946341 5320290 Smed_5988 Sinorhizobium medicae WSM419 hypothetical protein YP_001314596.1 945862 D 366394 CDS YP_001314597.1 150378002 5320291 946380..947318 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PF00446 probable myo-inositol catabolism protein; xylose isomerase domain-containing protein 947318 5320291 Smed_5989 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314597.1 946380 D 366394 CDS YP_001314598.1 150378003 5320292 947701..948720 1 NC_009621.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PF00447 hypothetical protein; xylose isomerase domain-containing protein 948720 5320292 Smed_5990 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001314598.1 947701 D 366394 CDS YP_001314599.1 150378004 5320293 948887..949711 1 NC_009621.1 PFAM: beta-lactamase domain protein; KEGG: ret:RHE_PF00448 putative metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 949711 5320293 Smed_5991 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001314599.1 948887 D 366394 CDS YP_001314600.1 150378005 5320294 949743..951398 1 NC_009621.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ret:RHE_PF00449 putative pyruvate decarboxylase protein; thiamine pyrophosphate binding domain-containing protein 951398 5320294 Smed_5992 Sinorhizobium medicae WSM419 thiamine pyrophosphate binding domain-containing protein YP_001314600.1 949743 D 366394 CDS YP_001314601.1 150378006 5320295 complement(951772..952221) 1 NC_009621.1 PFAM: ROSMUCR transcriptional regulator; KEGG: sme:SMa0748 putative MucR family transcriptional regulatory protein; MucR family transcriptional regulator 952221 5320295 Smed_5993 Sinorhizobium medicae WSM419 MucR family transcriptional regulator YP_001314601.1 951772 R 366394 CDS YP_001314602.1 150378007 5320296 952533..952778 1 NC_009621.1 hypothetical protein 952778 5320296 Smed_5994 Sinorhizobium medicae WSM419 hypothetical protein YP_001314602.1 952533 D 366394 CDS YP_001314603.1 150378008 5320297 complement(952951..953160) 1 NC_009621.1 hypothetical protein 953160 5320297 Smed_5995 Sinorhizobium medicae WSM419 hypothetical protein YP_001314603.1 952951 R 366394 CDS YP_001314604.1 150378009 5320298 953229..954647 1 NC_009621.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sme:SMc04263 putative amino acid carrier transmembrane protein; amino acid carrier protein 954647 5320298 Smed_5996 Sinorhizobium medicae WSM419 amino acid carrier protein YP_001314604.1 953229 D 366394 CDS YP_001314605.1 150378010 5320299 954699..954905 1 NC_009621.1 hypothetical protein 954905 5320299 Smed_5997 Sinorhizobium medicae WSM419 hypothetical protein YP_001314605.1 954699 D 366394 CDS YP_001314606.1 150378011 5320300 complement(955231..955758) 1 NC_009621.1 PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH00948 putative NTP pyrophosphohydrolase protein, MuT/NUDIX family; NUDIX hydrolase 955758 5320300 Smed_5998 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001314606.1 955231 R 366394 CDS YP_001314607.1 150378012 5320301 955823..956017 1 NC_009621.1 hypothetical protein 956017 5320301 Smed_5999 Sinorhizobium medicae WSM419 hypothetical protein YP_001314607.1 955823 D 366394 CDS YP_001314608.1 150378013 5320302 complement(956458..957981) 1 NC_009621.1 PFAM: Integrase catalytic region; KEGG: sme:SMc03283 putative transposase for insertion sequence ISRM18; integrase catalytic protein 957981 5320302 Smed_6000 Sinorhizobium medicae WSM419 integrase catalytic protein YP_001314608.1 956458 R 366394 CDS YP_001314609.1 150378014 5320303 complement(958095..958547) 1 NC_009621.1 KEGG: rle:pRL70076 5.1.4; hypothetical protein 958547 5320303 Smed_6001 Sinorhizobium medicae WSM419 hypothetical protein YP_001314609.1 958095 R 366394 CDS YP_001314610.1 150378015 5320306 complement(960331..961212) 1 NC_009621.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 961212 5320306 Smed_6004 Sinorhizobium medicae WSM419 formyltetrahydrofolate deformylase YP_001314610.1 960331 R 366394 CDS YP_001314611.1 150378016 5320307 complement(961354..962661) 1 NC_009621.1 PFAM: glutamine synthetase catalytic region; KEGG: atc:AGR_L_1262 glutamine synthetase III (glutamate--ammonia ligase III) (GSIII); glutamine synthetase catalytic region 962661 5320307 Smed_6005 Sinorhizobium medicae WSM419 glutamine synthetase catalytic region YP_001314611.1 961354 R 366394 CDS YP_001314612.1 150378017 5320308 complement(962748..964076) 1 NC_009621.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: rle:pRL110555 putative glutamate synthase [NADPH] large chain precursor; ferredoxin-dependent glutamate synthase 964076 5320308 Smed_6006 Sinorhizobium medicae WSM419 ferredoxin-dependent glutamate synthase YP_001314612.1 962748 R 366394 CDS YP_001314613.1 150378018 5320309 complement(964091..964777) 1 NC_009621.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: atc:AGR_L_1266 putative oxidoreductase protein; glutamate synthase subunit alpha 964777 5320309 Smed_6007 Sinorhizobium medicae WSM419 glutamate synthase subunit alpha YP_001314613.1 964091 R 366394 CDS YP_001314614.1 150378019 5320310 complement(964811..965716) 1 NC_009621.1 PFAM: glutamine amidotransferase class-II; KEGG: atc:AGR_L_1268 hypothetical protein; glutamine amidotransferase class-II 965716 5320310 Smed_6008 Sinorhizobium medicae WSM419 glutamine amidotransferase class-II YP_001314614.1 964811 R 366394 CDS YP_001314615.1 150378020 5320311 complement(965807..966466) 1 NC_009621.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: atc:AGR_L_1270 hypothetical protein; XRE family transcriptional regulator 966466 5320311 Smed_6009 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314615.1 965807 R 366394 CDS YP_001314616.1 150378021 5320314 complement(968108..968398) 1 NC_009621.1 hypothetical protein 968398 5320314 Smed_6012 Sinorhizobium medicae WSM419 hypothetical protein YP_001314616.1 968108 R 366394 CDS YP_001314617.1 150378022 5320318 970665..971696 1 NC_009621.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gox:GOX1386 hypothetical protein; filamentation induced by cAMP protein Fic 971696 5320318 Smed_6016 Sinorhizobium medicae WSM419 filamentation induced by cAMP protein Fic YP_001314617.1 970665 D 366394 CDS YP_001314618.1 150378023 5320320 complement(972205..972642) 1 NC_009621.1 hypothetical protein 972642 5320320 Smed_6018 Sinorhizobium medicae WSM419 hypothetical protein YP_001314618.1 972205 R 366394 CDS YP_001314619.1 150378024 5320322 complement(973891..974157) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein; transposase IS3/IS911 family protein 974157 5320322 Smed_6020 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314619.1 973891 R 366394 CDS YP_001314620.1 150378025 5320323 974325..975110 1 NC_009621.1 hypothetical protein 975110 5320323 Smed_6021 Sinorhizobium medicae WSM419 hypothetical protein YP_001314620.1 974325 D 366394 CDS YP_001314621.1 150378026 5320324 975110..975298 1 NC_009621.1 hypothetical protein 975298 5320324 Smed_6022 Sinorhizobium medicae WSM419 hypothetical protein YP_001314621.1 975110 D 366394 CDS YP_001314622.1 150378027 5320325 complement(join(975394..975996,975996..976340)) 1 NC_009621.1 KEGG: sme:SMb20783 putative transposase of insertion sequence ISRm2011-2, orfA protein; transposase 976340 5320325 Smed_6023 Sinorhizobium medicae WSM419 transposase YP_001314622.1 975394 R 366394 CDS YP_001314623.1 150378028 5320327 complement(976969..977415) 1 NC_009621.1 PFAM: ROSMUCR transcriptional regulator; KEGG: sme:SMa0748 putative MucR family transcriptional regulatory protein; MucR family transcriptional regulator 977415 5320327 Smed_6025 Sinorhizobium medicae WSM419 MucR family transcriptional regulator YP_001314623.1 976969 R 366394 CDS YP_001314624.1 150378029 5320329 complement(978191..979300) 1 NC_009621.1 PFAM: oxidoreductase molybdopterin binding; KEGG: ret:RHE_CH02958 putative sulfite oxidase protein; molybdopterin binding oxidoreductase 979300 5320329 Smed_6027 Sinorhizobium medicae WSM419 molybdopterin binding oxidoreductase YP_001314624.1 978191 R 366394 CDS YP_001314625.1 150378030 5320330 complement(979682..981034) 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: atu:Atu4018 two component sensor kinase; integral membrane sensor signal transduction histidine kinase 981034 5320330 Smed_6028 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001314625.1 979682 R 366394 CDS YP_001314626.1 150378031 5320331 complement(981024..981692) 1 NC_009621.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rsp:RSP_3088 two component transcriptional regulator, winged helix family; two component transcriptional regulator 981692 5320331 Smed_6029 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001314626.1 981024 R 366394 CDS YP_001314627.1 150378032 5320332 981844..982068 1 NC_009621.1 KEGG: maq:Maqu_3215 hypothetical protein; hypothetical protein 982068 5320332 Smed_6030 Sinorhizobium medicae WSM419 hypothetical protein YP_001314627.1 981844 D 366394 CDS YP_001314628.1 150378033 5320335 complement(982934..984676) 1 NC_009621.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: atc:AGR_L_1668 putative membrane protein; sulfatase 984676 5320335 Smed_6033 Sinorhizobium medicae WSM419 sulfatase YP_001314628.1 982934 R 366394 CDS YP_001314629.1 150378034 5320336 complement(984966..986168) 1 NC_009621.1 PFAM: transposase mutator type; KEGG: sme:SMa1356 TRm3 transposase; transposase mutator type 986168 5320336 Smed_6034 Sinorhizobium medicae WSM419 transposase mutator type YP_001314629.1 984966 R 366394 CDS YP_001314630.1 150378035 5320338 986612..986878 1 NC_009621.1 KEGG: maq:Maqu_3215 hypothetical protein; hypothetical protein 986878 5320338 Smed_6036 Sinorhizobium medicae WSM419 hypothetical protein YP_001314630.1 986612 D 366394 CDS YP_001314631.1 150378036 5320339 986882..987427 1 NC_009621.1 PFAM: cytochrome B561; KEGG: ajs:Ajs_0510 cytochrome b561; cytochrome B561 987427 5320339 Smed_6037 Sinorhizobium medicae WSM419 cytochrome B561 YP_001314631.1 986882 D 366394 CDS YP_001314632.1 150378037 5320342 988035..988247 1 NC_009621.1 hypothetical protein 988247 5320342 Smed_6040 Sinorhizobium medicae WSM419 hypothetical protein YP_001314632.1 988035 D 366394 CDS YP_001314633.1 150378038 5320343 989619..991520 1 NC_009621.1 PFAM: K potassium transporter; KEGG: sme:SMa1798 Kup2 potassium uptake protein; K potassium transporter 991520 5320343 Smed_6041 Sinorhizobium medicae WSM419 K potassium transporter YP_001314633.1 989619 D 366394 CDS YP_001314634.1 150378039 5320345 992753..992983 1 NC_009621.1 hypothetical protein 992983 5320345 Smed_6043 Sinorhizobium medicae WSM419 hypothetical protein YP_001314634.1 992753 D 366394 CDS YP_001314635.1 150378040 5320346 complement(993016..993696) 1 NC_009621.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMa0753 hypothetical protein with localized conservation; flavin reductase domain-containing protein 993696 5320346 Smed_6044 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001314635.1 993016 R 366394 CDS YP_001314636.1 150378041 5320350 complement(995545..995835) 1 NC_009621.1 KEGG: rle:RL1148 hypothetical protein; hypothetical protein 995835 5320350 Smed_6048 Sinorhizobium medicae WSM419 hypothetical protein YP_001314636.1 995545 R 366394 CDS YP_001314637.1 150378042 5320351 996075..996464 1 NC_009621.1 hypothetical protein 996464 5320351 Smed_6049 Sinorhizobium medicae WSM419 hypothetical protein YP_001314637.1 996075 D 366394 CDS YP_001314638.1 150378043 5320353 997658..998839 1 NC_009621.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: ret:RHE_PF00449 putative pyruvate decarboxylase protein; thiamine pyrophosphate binding domain-containing protein 998839 5320353 Smed_6051 Sinorhizobium medicae WSM419 thiamine pyrophosphate binding domain-containing protein YP_001314638.1 997658 D 366394 CDS YP_001314639.1 150378044 5320354 999051..999260 1 NC_009621.1 KEGG: mlo:msl9199 hypothetical protein; hypothetical protein 999260 5320354 Smed_6052 Sinorhizobium medicae WSM419 hypothetical protein YP_001314639.1 999051 D 366394 CDS YP_001314640.1 150378045 5320356 1000737..1001462 1 NC_009621.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sma:SAV1553 methyltransferase; type 11 methyltransferase 1001462 5320356 Smed_6054 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001314640.1 1000737 D 366394 CDS YP_001314641.1 150378046 5320359 complement(1002099..1002554) 1 NC_009621.1 PFAM: ROSMUCR transcriptional regulator; KEGG: sme:SMa0748 putative MucR family transcriptional regulatory protein; MucR family transcriptional regulator 1002554 5320359 Smed_6057 Sinorhizobium medicae WSM419 MucR family transcriptional regulator YP_001314641.1 1002099 R 366394 CDS YP_001314642.1 150378047 5320360 1002866..1003111 1 NC_009621.1 hypothetical protein 1003111 5320360 Smed_6058 Sinorhizobium medicae WSM419 hypothetical protein YP_001314642.1 1002866 D 366394 CDS YP_001314643.1 150378048 5320361 complement(1003284..1003493) 1 NC_009621.1 hypothetical protein 1003493 5320361 Smed_6059 Sinorhizobium medicae WSM419 hypothetical protein YP_001314643.1 1003284 R 366394 CDS YP_001314644.1 150378049 5320362 1003562..1004980 1 NC_009621.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sme:SMc04263 putative amino acid carrier transmembrane protein; amino acid carrier protein 1004980 5320362 Smed_6060 Sinorhizobium medicae WSM419 amino acid carrier protein YP_001314644.1 1003562 D 366394 CDS YP_001314645.1 150378050 5320363 1005032..1005238 1 NC_009621.1 hypothetical protein 1005238 5320363 Smed_6061 Sinorhizobium medicae WSM419 hypothetical protein YP_001314645.1 1005032 D 366394 CDS YP_001314646.1 150378051 5320364 complement(1005564..1006040) 1 NC_009621.1 PFAM: NUDIX hydrolase; KEGG: ret:RHE_CH00948 putative NTP pyrophosphohydrolase protein, MuT/NUDIX family; NUDIX hydrolase 1006040 5320364 Smed_6062 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001314646.1 1005564 R 366394 CDS YP_001314647.1 150378052 5320365 1006156..1006350 1 NC_009621.1 hypothetical protein 1006350 5320365 Smed_6063 Sinorhizobium medicae WSM419 hypothetical protein YP_001314647.1 1006156 D 366394 CDS YP_001314648.1 150378053 5320366 1006607..1006810 1 NC_009621.1 PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: sme:SMa0738 probable CspA6 cold shock protein transcriptional regulator; cold-shock DNA-binding domain-containing protein 1006810 5320366 Smed_6064 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001314648.1 1006607 D 366394 CDS YP_001314649.1 150378054 5320368 1007459..1007977 1 NC_009621.1 hypothetical protein 1007977 5320368 Smed_6066 Sinorhizobium medicae WSM419 hypothetical protein YP_001314649.1 1007459 D 366394 CDS YP_001314650.1 150378055 5320369 complement(1008032..1008361) 1 NC_009621.1 KEGG: atc:AGR_C_824 hypothetical protein; hypothetical protein 1008361 5320369 Smed_6067 Sinorhizobium medicae WSM419 hypothetical protein YP_001314650.1 1008032 R 366394 CDS YP_001314651.1 150378056 5320370 complement(1008362..1008721) 1 NC_009621.1 KEGG: sme:SMb20921 hypothetical protein; hypothetical protein 1008721 5320370 Smed_6068 Sinorhizobium medicae WSM419 hypothetical protein YP_001314651.1 1008362 R 366394 CDS YP_001314652.1 150378057 5320372 1009721..1009942 1 NC_009621.1 KEGG: sme:SMb21395 hypothetical protein; hypothetical protein 1009942 5320372 Smed_6070 Sinorhizobium medicae WSM419 hypothetical protein YP_001314652.1 1009721 D 366394 CDS YP_001314653.1 150378058 5320373 1010113..1010370 1 NC_009621.1 KEGG: sme:SMb21396 hypothetical protein; hypothetical protein 1010370 5320373 Smed_6071 Sinorhizobium medicae WSM419 hypothetical protein YP_001314653.1 1010113 D 366394 CDS YP_001314654.1 150378059 5320374 1010426..1010602 1 NC_009621.1 KEGG: sme:SMb21396 hypothetical protein; hypothetical protein 1010602 5320374 Smed_6072 Sinorhizobium medicae WSM419 hypothetical protein YP_001314654.1 1010426 D 366394 CDS YP_001314655.1 150378060 5320375 1010845..1011291 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: ret:RHE_CH00142 putative transcriptional regulator protein, Cro/CI family; XRE family transcriptional regulator 1011291 5320375 Smed_6073 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314655.1 1010845 D 366394 CDS YP_001314656.1 150378061 5320379 complement(1012475..1012765) 1 NC_009621.1 hypothetical protein 1012765 5320379 Smed_6077 Sinorhizobium medicae WSM419 hypothetical protein YP_001314656.1 1012475 R 366394 CDS YP_001314657.1 150378062 5320381 1013940..1014077 1 NC_009621.1 hypothetical protein 1014077 5320381 Smed_6079 Sinorhizobium medicae WSM419 hypothetical protein YP_001314657.1 1013940 D 366394 CDS YP_001314658.1 150378063 5320382 1014919..1015053 1 NC_009621.1 KEGG: sme:SMb21026 hypothetical exopeptide protein; exopeptide protein 1015053 5320382 Smed_6080 Sinorhizobium medicae WSM419 exopeptide protein YP_001314658.1 1014919 D 366394 CDS YP_001314659.1 150378064 5320383 1015252..1015503 1 NC_009621.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: rpe:RPE_3305 acyl carrier protein; acyl carrier protein 1015503 5320383 Smed_6081 Sinorhizobium medicae WSM419 acyl carrier protein YP_001314659.1 1015252 D 366394 CDS YP_001314660.1 150378065 5320385 1016691..1016987 1 NC_009621.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1016987 groES 5320385 groES Sinorhizobium medicae WSM419 co-chaperonin GroES YP_001314660.1 1016691 D 366394 CDS YP_001314661.1 150378066 5320386 1017063..1018700 1 NC_009621.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 1018700 groEL 5320386 groEL Sinorhizobium medicae WSM419 chaperonin GroEL YP_001314661.1 1017063 D 366394 CDS YP_001314662.1 150378067 5320387 complement(1020728..1021204) 1 NC_009621.1 SMART: nuclease (SNase domain protein); KEGG: sme:SMb21662 putative periplasmic protein; nuclease 1021204 5320387 Smed_6085 Sinorhizobium medicae WSM419 nuclease YP_001314662.1 1020728 R 366394 CDS YP_001314663.1 150378068 5320390 complement(1022631..1023818) 1 NC_009621.1 PFAM: peptidase C1A papain; KEGG: cph:Cpha266_2670 peptidase C1A, papain; peptidase C1A papain 1023818 5320390 Smed_6088 Sinorhizobium medicae WSM419 peptidase C1A papain YP_001314663.1 1022631 R 366394 CDS YP_001314664.1 150378069 5320391 1023923..1026844 1 NC_009621.1 PFAM: Lanthionine synthetase C family protein; KEGG: pmf:P9303_21071 possible MrsD-like protein; lanthionine synthetase C family protein 1026844 5320391 Smed_6089 Sinorhizobium medicae WSM419 lanthionine synthetase C family protein YP_001314664.1 1023923 D 366394 CDS YP_001314665.1 150378070 5320392 1026941..1027183 1 NC_009621.1 hypothetical protein 1027183 5320392 Smed_6090 Sinorhizobium medicae WSM419 hypothetical protein YP_001314665.1 1026941 D 366394 CDS YP_001314666.1 150378071 5320395 complement(1028826..1029389) 1 NC_009621.1 TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein; yecA family protein 1029389 5320395 Smed_6093 Sinorhizobium medicae WSM419 yecA family protein YP_001314666.1 1028826 R 366394 CDS YP_001314667.1 150378072 5320396 complement(1029386..1030258) 1 NC_009621.1 PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative; transposase IS66 1030258 5320396 Smed_6094 Sinorhizobium medicae WSM419 transposase IS66 YP_001314667.1 1029386 R 366394 CDS YP_001314668.1 150378073 5320397 complement(1030312..1031571) 1 NC_009621.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sme:SMb21045 putative reverse transcriptasematurase protein; RNA-directed DNA polymerase 1031571 5320397 Smed_6095 Sinorhizobium medicae WSM419 RNA-directed DNA polymerase YP_001314668.1 1030312 R 366394 CDS YP_001314669.1 150378074 5320398 1031704..1032024 1 NC_009621.1 hypothetical protein 1032024 5320398 Smed_6096 Sinorhizobium medicae WSM419 hypothetical protein YP_001314669.1 1031704 D 366394 CDS YP_001314670.1 150378075 5320399 complement(1032084..1032845) 1 NC_009621.1 PFAM: transposase IS66; KEGG: sme:SMc03280 putative transposase number 3 for insertion sequence ISRM28; transposase IS66 1032845 5320399 Smed_6097 Sinorhizobium medicae WSM419 transposase IS66 YP_001314670.1 1032084 R 366394 CDS YP_001314671.1 150378076 5320400 complement(1032894..1033250) 1 NC_009621.1 PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28; IS66 Orf2 family protein 1033250 5320400 Smed_6098 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314671.1 1032894 R 366394 CDS YP_001314672.1 150378077 5320402 1033805..1034119 1 NC_009621.1 hypothetical protein 1034119 5320402 Smed_6100 Sinorhizobium medicae WSM419 hypothetical protein YP_001314672.1 1033805 D 366394 CDS YP_001314673.1 150378078 5320403 complement(1034185..1034829) 1 NC_009621.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_2380 methyltransferase type 11; type 11 methyltransferase 1034829 5320403 Smed_6101 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001314673.1 1034185 R 366394 CDS YP_001314674.1 150378079 5320404 complement(1034826..1035968) 1 NC_009621.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 1035968 5320404 Smed_6102 Sinorhizobium medicae WSM419 molybdopterin biosynthesis protein MoeB YP_001314674.1 1034826 R 366394 CDS YP_001314675.1 150378080 5320405 complement(1035973..1036251) 1 NC_009621.1 PFAM: thiamineS protein; KEGG: cya:CYA_0300 MoaD family protein; sulfur transfer protein ThiS 1036251 5320405 Smed_6103 Sinorhizobium medicae WSM419 sulfur transfer protein ThiS YP_001314675.1 1035973 R 366394 CDS YP_001314676.1 150378081 5320406 complement(1036289..1037152) 1 NC_009621.1 hypothetical protein 1037152 5320406 Smed_6104 Sinorhizobium medicae WSM419 hypothetical protein YP_001314676.1 1036289 R 366394 CDS YP_001314677.1 150378082 5320407 complement(1037145..1038107) 1 NC_009621.1 hypothetical protein 1038107 5320407 Smed_6105 Sinorhizobium medicae WSM419 hypothetical protein YP_001314677.1 1037145 R 366394 CDS YP_001314678.1 150378083 5320408 complement(1038167..1039384) 1 NC_009621.1 PFAM: protein of unknown function DUF181; KEGG: mtp:Mthe_1401 uncharacterized domain protein; hypothetical protein 1039384 5320408 Smed_6106 Sinorhizobium medicae WSM419 hypothetical protein YP_001314678.1 1038167 R 366394 CDS YP_001314679.1 150378084 5320409 complement(1039381..1040751) 1 NC_009621.1 PFAM: TfuA domain protein core; KEGG: mxa:MXAN_2398 hypothetical protein; TfuA domain-containing protein 1040751 5320409 Smed_6107 Sinorhizobium medicae WSM419 TfuA domain-containing protein YP_001314679.1 1039381 R 366394 CDS YP_001314680.1 150378085 5320410 complement(1040751..1041941) 1 NC_009621.1 PFAM: protein of unknown function DUF181; KEGG: pde:Pden_3472 hypothetical protein; hypothetical protein 1041941 5320410 Smed_6108 Sinorhizobium medicae WSM419 hypothetical protein YP_001314680.1 1040751 R 366394 CDS YP_001314681.1 150378086 5320411 complement(1042012..1042245) 1 NC_009621.1 hypothetical protein 1042245 5320411 Smed_6109 Sinorhizobium medicae WSM419 hypothetical protein YP_001314681.1 1042012 R 366394 CDS YP_001314682.1 150378087 5320412 complement(1042395..1042628) 1 NC_009621.1 hypothetical protein 1042628 5320412 Smed_6110 Sinorhizobium medicae WSM419 hypothetical protein YP_001314682.1 1042395 R 366394 CDS YP_001314683.1 150378088 5320413 complement(1042937..1043170) 1 NC_009621.1 hypothetical protein 1043170 5320413 Smed_6111 Sinorhizobium medicae WSM419 hypothetical protein YP_001314683.1 1042937 R 366394 CDS YP_001314684.1 150378089 5320414 complement(1043320..1043553) 1 NC_009621.1 hypothetical protein 1043553 5320414 Smed_6112 Sinorhizobium medicae WSM419 hypothetical protein YP_001314684.1 1043320 R 366394 CDS YP_001314685.1 150378090 5320415 join(1043881..1044225,1044225..1044827) 1 NC_009621.1 KEGG: nha:Nham_4172 ISSpo6, transposase orf A; transposase 1044827 5320415 Smed_6113 Sinorhizobium medicae WSM419 transposase YP_001314685.1 1043881 D 366394 CDS YP_001314686.1 150378091 5320416 complement(1044913..1045146) 1 NC_009621.1 hypothetical protein 1045146 5320416 Smed_6114 Sinorhizobium medicae WSM419 hypothetical protein YP_001314686.1 1044913 R 366394 CDS YP_001314687.1 150378092 5320420 complement(join(1046196..1046636,1046636..1046959)) 1 NC_009621.1 KEGG: bms:BR0533 ISBm1, transposase orfA; transposase 1046959 5320420 Smed_6118 Sinorhizobium medicae WSM419 transposase YP_001314687.1 1046196 R 366394 CDS YP_001314688.1 150378093 5320421 1047442..1048218 1 NC_009621.1 KEGG: pst:PSPTO_4873 hypothetical protein; hypothetical protein 1048218 5320421 Smed_6119 Sinorhizobium medicae WSM419 hypothetical protein YP_001314688.1 1047442 D 366394 CDS YP_001314689.1 150378094 5320422 1048345..1049106 1 NC_009621.1 KEGG: pst:PSPTO_4873 hypothetical protein; hypothetical protein 1049106 5320422 Smed_6120 Sinorhizobium medicae WSM419 hypothetical protein YP_001314689.1 1048345 D 366394 CDS YP_001314690.1 150378095 5320424 1049871..1050131 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL70144 putative insertion sequence protein; transposase IS3/IS911 family protein 1050131 5320424 Smed_6122 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314690.1 1049871 D 366394 CDS YP_001314691.1 150378096 5320426 complement(1050558..1050767) 1 NC_009621.1 hypothetical protein 1050767 5320426 Smed_6124 Sinorhizobium medicae WSM419 hypothetical protein YP_001314691.1 1050558 R 366394 CDS YP_001314692.1 150378097 5320427 1050875..1051744 1 NC_009621.1 PFAM: Integrase catalytic region; KEGG: sus:Acid_6862 integrase, catalytic region; integrase catalytic protein 1051744 5320427 Smed_6125 Sinorhizobium medicae WSM419 integrase catalytic protein YP_001314692.1 1050875 D 366394 CDS YP_001314693.1 150378098 5320429 complement(1052602..1053315) 1 NC_009621.1 KEGG: bja:blr8219 putative transposase; putative transposase 1053315 5320429 Smed_6127 Sinorhizobium medicae WSM419 putative transposase YP_001314693.1 1052602 R 366394 CDS YP_001314694.1 150378099 5320430 complement(1053350..1053682) 1 NC_009621.1 hypothetical protein 1053682 5320430 Smed_6128 Sinorhizobium medicae WSM419 hypothetical protein YP_001314694.1 1053350 R 366394 CDS YP_001314695.1 150378100 5320431 complement(1053805..1055415) 1 NC_009621.1 PFAM: tyrosinase; KEGG: nmu:Nmul_A0920 tyrosinase; monophenol monooxygenase 1055415 5320431 Smed_6129 Sinorhizobium medicae WSM419 monophenol monooxygenase YP_001314695.1 1053805 R 366394 CDS YP_001314696.1 150378101 5320432 complement(1055480..1055872) 1 NC_009621.1 KEGG: nha:Nham_1020 hypothetical protein; hypothetical protein 1055872 5320432 Smed_6130 Sinorhizobium medicae WSM419 hypothetical protein YP_001314696.1 1055480 R 366394 CDS YP_001314697.1 150378102 5320433 complement(1055900..1057840) 1 NC_009621.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: hch:HCH_03584 putative multicopper oxidases; multicopper oxidase type 3 1057840 5320433 Smed_6131 Sinorhizobium medicae WSM419 multicopper oxidase type 3 YP_001314697.1 1055900 R 366394 CDS YP_001314698.1 150378103 5320435 1058829..1059071 1 NC_009621.1 KEGG: sme:SMb21395 hypothetical protein; hypothetical protein 1059071 5320435 Smed_6133 Sinorhizobium medicae WSM419 hypothetical protein YP_001314698.1 1058829 D 366394 CDS YP_001314699.1 150378104 5320436 1059357..1059776 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: ret:RHE_CH00142 putative transcriptional regulator protein, Cro/CI family; XRE family transcriptional regulator 1059776 5320436 Smed_6134 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314699.1 1059357 D 366394 CDS YP_001314700.1 150378105 5320439 complement(join(1060532..1060972,1060972..1061295)) 1 NC_009621.1 KEGG: bms:BR0533 ISBm1, transposase orfA; transposase 1061295 5320439 Smed_6137 Sinorhizobium medicae WSM419 transposase YP_001314700.1 1060532 R 366394 CDS YP_001314701.1 150378106 5320440 1062554..1064209 1 NC_009621.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: ret:RHE_PF00141 putative kinase protein; diguanylate cyclase/phosphodiesterase 1064209 5320440 Smed_6138 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001314701.1 1062554 D 366394 CDS YP_001314702.1 150378107 5320441 1064276..1065418 1 NC_009621.1 PFAM: Pectate lyase/Amb allergen; KEGG: xcb:XC_3591 pectate lyase; Pectate lyase 1065418 5320441 Smed_6139 Sinorhizobium medicae WSM419 Pectate lyase YP_001314702.1 1064276 D 366394 CDS YP_001314703.1 150378108 5320442 1065775..1066524 1 NC_009621.1 PFAM: carbonic anhydrase; KEGG: sme:SMa0045 probable carbonic anhydrase, Cah; carbonate dehydratase 1066524 5320442 Smed_6140 Sinorhizobium medicae WSM419 carbonate dehydratase YP_001314703.1 1065775 D 366394 CDS YP_001314704.1 150378109 5320443 complement(1067101..1068441) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMb20891 putative dehydrogenase, possibly aldehyde dehydrogenase protein; aldehyde dehydrogenase 1068441 5320443 Smed_6141 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001314704.1 1067101 R 366394 CDS YP_001314705.1 150378110 5320444 1068650..1069537 1 NC_009621.1 KEGG: rle:pRL70127 hypothetical protein; hypothetical protein 1069537 5320444 Smed_6142 Sinorhizobium medicae WSM419 hypothetical protein YP_001314705.1 1068650 D 366394 CDS YP_001314706.1 150378111 5320445 1070183..1071829 1 NC_009621.1 coupling protein TraG/VirD4 family; type IV secretion system protein VirD4 1071829 5320445 Smed_6143 Sinorhizobium medicae WSM419 type IV secretion system protein VirD4 YP_001314706.1 1070183 D 366394 CDS YP_001314707.1 150378112 5320447 complement(1072621..1073346) 1 NC_009621.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: atc:AGR_pTi_15 probable virG gene; two-component response regulator VirG 1073346 5320447 Smed_6145 Sinorhizobium medicae WSM419 two-component response regulator VirG YP_001314707.1 1072621 R 366394 CDS YP_001314708.1 150378113 5320448 complement(1073399..1074547) 1 NC_009621.1 KEGG: sme:SMb21224 putative sulfate adenylyltransferase subunit 1 adenylsulfate kinase protein; GTPase - Sulfate adenylate transferase subunit 1-like protein 1074547 5320448 Smed_6146 Sinorhizobium medicae WSM419 GTPase - Sulfate adenylate transferase subunit 1-like protein YP_001314708.1 1073399 R 366394 CDS YP_001314709.1 150378114 5320450 complement(1074992..1075300) 1 NC_009621.1 KEGG: ret:RHE_PA00037 hypothetical protein; hypothetical protein 1075300 5320450 Smed_6148 Sinorhizobium medicae WSM419 hypothetical protein YP_001314709.1 1074992 R 366394 CDS YP_001314710.1 150378115 5320453 complement(join(1076715..1077167,1077167..1077496)) 1 NC_009621.1 KEGG: gox:GOX2729 transposase; hypothetical protein 1077496 5320453 Smed_6151 Sinorhizobium medicae WSM419 hypothetical protein YP_001314710.1 1076715 R 366394 CDS YP_001314711.1 150378116 5320454 complement(1077566..1078606) 1 NC_009621.1 ATPase; type IV secretion system protein VirB11 1078606 5320454 Smed_6152 Sinorhizobium medicae WSM419 type IV secretion system protein VirB11 YP_001314711.1 1077566 R 366394 CDS YP_001314712.1 150378117 5320455 complement(1078646..1079764) 1 NC_009621.1 PFAM: conjugation TrbI family protein; KEGG: atc:AGR_pTi_13 probable virB10 gene; type IV secretion system protein VirB10 1079764 5320455 Smed_6153 Sinorhizobium medicae WSM419 type IV secretion system protein VirB10 YP_001314712.1 1078646 R 366394 CDS YP_001314713.1 150378118 5320456 complement(1079761..1080642) 1 NC_009621.1 TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: atc:AGR_pTi_12 probable virB9 gene; type IV secretion system protein VirB9 1080642 5320456 Smed_6154 Sinorhizobium medicae WSM419 type IV secretion system protein VirB9 YP_001314713.1 1079761 R 366394 CDS YP_001314714.1 150378119 5320457 complement(1080639..1081352) 1 NC_009621.1 PFAM: VirB8 family protein; KEGG: atc:AGR_pTi_11 probable virB8 gene; type IV secretion system protein VirB8 1081352 5320457 Smed_6155 Sinorhizobium medicae WSM419 type IV secretion system protein VirB8 YP_001314714.1 1080639 R 366394 CDS YP_001314715.1 150378120 5320458 complement(1081339..1081506) 1 NC_009621.1 KEGG: atc:AGR_pTi_missing T-DNA transfer lipoprotein (virB7); type IV secretion system lipoprotein VirB7 1081506 5320458 Smed_6156 Sinorhizobium medicae WSM419 type IV secretion system lipoprotein VirB7 YP_001314715.1 1081339 R 366394 CDS YP_001314716.1 150378121 5320459 complement(1081539..1082426) 1 NC_009621.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: atc:AGR_pTi_10 virB6 protein; type IV secretion system protein VirB6 1082426 5320459 Smed_6157 Sinorhizobium medicae WSM419 type IV secretion system protein VirB6 YP_001314716.1 1081539 R 366394 CDS YP_001314717.1 150378122 5320460 complement(1082508..1083191) 1 NC_009621.1 KEGG: atc:AGR_pTi_9 probable virB5 gene; type IV secretion system protein VirB5 1083191 5320460 Smed_6158 Sinorhizobium medicae WSM419 type IV secretion system protein VirB5 YP_001314717.1 1082508 R 366394 CDS YP_001314718.1 150378123 5320461 complement(1083205..1085574) 1 NC_009621.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: atc:AGR_pTi_8 VIRB4 protein precursor; type IV secretion system protein VirB4 1085574 5320461 Smed_6159 Sinorhizobium medicae WSM419 type IV secretion system protein VirB4 YP_001314718.1 1083205 R 366394 CDS YP_001314719.1 150378124 5320462 complement(1085574..1085900) 1 NC_009621.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: atc:AGR_pTi_bx137 T-DNA transfer exported protein (virB3); type IV secretion system protein VirB3 1085900 5320462 Smed_6160 Sinorhizobium medicae WSM419 type IV secretion system protein VirB3 YP_001314719.1 1085574 R 366394 CDS YP_001314720.1 150378125 5320463 complement(1085897..1086259) 1 NC_009621.1 PFAM: VIRB2 type IV secretion fmaily protein; KEGG: atc:AGR_pTi_4 probable virB2 gene; type IV secretion system pilin subunit VirB2 1086259 5320463 Smed_6161 Sinorhizobium medicae WSM419 type IV secretion system pilin subunit VirB2 YP_001314720.1 1085897 R 366394 CDS YP_001314721.1 150378126 5320464 complement(1086273..1086980) 1 NC_009621.1 PFAM: Lytic transglycosylase catalytic; KEGG: atc:AGR_pTi_3 ORF1 (virB1) (AA 1 - 252); type IV secretion system lytic transglycosylase VirB1 1086980 5320464 Smed_6162 Sinorhizobium medicae WSM419 type IV secretion system lytic transglycosylase VirB1 YP_001314721.1 1086273 R 366394 CDS YP_001314722.1 150378127 5320467 1088723..1089133 1 NC_009621.1 hypothetical protein 1089133 5320467 Smed_6165 Sinorhizobium medicae WSM419 hypothetical protein YP_001314722.1 1088723 D 366394 CDS YP_001314723.1 150378128 5320468 1089507..1090595 1 NC_009621.1 KEGG: nha:Nham_4600 feruloyl esterase; feruloyl esterase 1090595 5320468 Smed_6166 Sinorhizobium medicae WSM419 feruloyl esterase YP_001314723.1 1089507 D 366394 CDS YP_001314724.1 150378129 5320469 complement(join(1090631..1091071,1091071..1091394)) 1 NC_009621.1 KEGG: bms:BR0533 ISBm1, transposase orfA; transposase 1091394 5320469 Smed_6167 Sinorhizobium medicae WSM419 transposase YP_001314724.1 1090631 R 366394 CDS YP_001314725.1 150378130 5320470 complement(join(1091482..1091922,1091922..1092245)) 1 NC_009621.1 KEGG: bms:BR0533 ISBm1, transposase orfA; transposase 1092245 5320470 Smed_6168 Sinorhizobium medicae WSM419 transposase YP_001314725.1 1091482 R 366394 CDS YP_001314726.1 150378131 5320472 1092997..1093515 1 NC_009621.1 hypothetical protein 1093515 5320472 Smed_6170 Sinorhizobium medicae WSM419 hypothetical protein YP_001314726.1 1092997 D 366394 CDS YP_001314727.1 150378132 5320478 1095835..1096131 1 NC_009621.1 hypothetical protein 1096131 5320478 Smed_6176 Sinorhizobium medicae WSM419 hypothetical protein YP_001314727.1 1095835 D 366394 CDS YP_001314728.1 150378133 5320479 1096824..1098650 1 NC_009621.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1098650 5320479 Smed_6177 Sinorhizobium medicae WSM419 glucosamine--fructose-6-phosphate aminotransferase YP_001314728.1 1096824 D 366394 CDS YP_001314729.1 150378134 5320480 1098734..1099837 1 NC_009621.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMa0876 NolF secretion protein; RND family efflux transporter MFP subunit 1099837 5320480 Smed_6178 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001314729.1 1098734 D 366394 CDS YP_001314730.1 150378135 5320481 1099841..1103038 1 NC_009621.1 PFAM: acriflavin resistance protein; KEGG: sme:SMa0875 NolG efflux transporter; acriflavin resistance protein 1103038 5320481 Smed_6179 Sinorhizobium medicae WSM419 acriflavin resistance protein YP_001314730.1 1099841 D 366394 CDS YP_001314731.1 150378136 5320483 complement(1103589..1104914) 1 NC_009621.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 1104914 5320483 Smed_6181 Sinorhizobium medicae WSM419 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_001314731.1 1103589 R 366394 CDS YP_001314732.1 150378137 5320484 complement(1104914..1105246) 1 NC_009621.1 KEGG: sme:SMa0872 hypothetical protein ORF 110; hypothetical protein 1105246 5320484 Smed_6182 Sinorhizobium medicae WSM419 hypothetical protein YP_001314732.1 1104914 R 366394 CDS YP_001314733.1 150378138 5320485 complement(1105936..1106871) 1 NC_009621.1 PFAM: regulatory protein LysR; KEGG: sme:SMa0870 NodD1 transcription regulator; LysR family transcriptional regulator 1106871 5320485 Smed_6183 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314733.1 1105936 R 366394 CDS YP_001314734.1 150378139 5320486 1107126..1107716 1 NC_009621.1 catalyzes the transfer of a fatty acyl group onto Nod factor, beta-(1,4)-N-acetylglucosamine oligosaccharide; acyltransferase NodA 1107716 5320486 Smed_6184 Sinorhizobium medicae WSM419 acyltransferase NodA YP_001314734.1 1107126 D 366394 CDS YP_001314735.1 150378140 5320487 1107713..1108366 1 NC_009621.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMa0868 NodB chitooligosaccharide deacetylase; polysaccharide deacetylase 1108366 5320487 Smed_6185 Sinorhizobium medicae WSM419 polysaccharide deacetylase YP_001314735.1 1107713 D 366394 CDS YP_001314736.1 150378141 5320488 1108381..1109661 1 NC_009621.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: sme:SMa0866 NodC N-acetylglucosaminyltransferase; glycosyl transferase family protein 1109661 5320488 Smed_6186 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001314736.1 1108381 D 366394 CDS YP_001314737.1 150378142 5320489 1109669..1110736 1 NC_009621.1 ATP-binding subunit; with NodJ is involved in the export of lipo-chitin oligosaccharide; involved in nodulation induction; nodulation factor exporter subunit NodI 1110736 5320489 Smed_6187 Sinorhizobium medicae WSM419 nodulation factor exporter subunit NodI YP_001314737.1 1109669 D 366394 CDS YP_001314738.1 150378143 5320490 1110740..1111528 1 NC_009621.1 TIGRFAM: ABC-2 type transporter, NodJ family; PFAM: ABC-2 type transporter; KEGG: sme:SMa0863 NodJ membrane transport protein; ABC transporter 1111528 5320490 Smed_6188 Sinorhizobium medicae WSM419 ABC transporter YP_001314738.1 1110740 D 366394 CDS YP_001314739.1 150378144 5320493 complement(1113109..1115010) 1 NC_009621.1 in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from EScherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 1115010 5320493 Smed_6191 Sinorhizobium medicae WSM419 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein YP_001314739.1 1113109 R 366394 CDS YP_001314740.1 150378145 5320494 complement(1115010..1115909) 1 NC_009621.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1115909 5320494 Smed_6192 Sinorhizobium medicae WSM419 sulfate adenylyltransferase subunit 2 YP_001314740.1 1115010 R 366394 CDS YP_001314741.1 150378146 5320495 complement(1116325..1117062) 1 NC_009621.1 catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation; 3-ketoacyl-(acyl-carrier-protein) reductase NodG 1117062 5320495 Smed_6193 Sinorhizobium medicae WSM419 3-ketoacyl-(acyl-carrier-protein) reductase NodG YP_001314741.1 1116325 R 366394 CDS YP_001314742.1 150378147 5320496 complement(1117553..1118761) 1 NC_009621.1 PFAM: Beta-ketoacyl synthase; KEGG: sme:SMa0853 NodE beta ketoacyl ACP synthase; beta-ketoacyl synthase 1118761 5320496 Smed_6194 Sinorhizobium medicae WSM419 beta-ketoacyl synthase YP_001314742.1 1117553 R 366394 CDS YP_001314743.1 150378148 5320497 complement(1118764..1119045) 1 NC_009621.1 KEGG: sme:SMa0852 NodF acyl carrier protein; NodF acyl carrier protein 1119045 5320497 Smed_6195 Sinorhizobium medicae WSM419 NodF acyl carrier protein YP_001314743.1 1118764 R 366394 CDS YP_001314744.1 150378149 5320498 1119739..1120482 1 NC_009621.1 KEGG: sme:SMa0851 NodH sulfotransferase; NodH sulfotransferase 1120482 5320498 Smed_6196 Sinorhizobium medicae WSM419 NodH sulfotransferase YP_001314744.1 1119739 D 366394 CDS YP_001314745.1 150378150 5320499 1121281..1121667 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03301 putative transposase number 1 for insertion sequence ISRM26; transposase IS3/IS911 family protein 1121667 5320499 Smed_6197 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314745.1 1121281 D 366394 CDS YP_001314746.1 150378151 5320500 1121736..1122008 1 NC_009621.1 PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03300 putative transposase number 2 for insertion sequence ISRM26; IS66 Orf2 family protein 1122008 5320500 Smed_6198 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314746.1 1121736 D 366394 CDS YP_001314747.1 150378152 5320501 1122133..1123782 1 NC_009621.1 PFAM: transposase IS66; KEGG: sme:SMc03298 putative transposase number 3 for insertion sequence ISRM26; transposase IS66 1123782 5320501 Smed_6199 Sinorhizobium medicae WSM419 transposase IS66 YP_001314747.1 1122133 D 366394 CDS YP_001314748.1 150378153 5320503 complement(1124662..1125585) 1 NC_009621.1 PFAM: phage integrase family protein; KEGG: sus:Acid_3311 phage integrase family protein; phage integrase family protein 1125585 5320503 Smed_6201 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314748.1 1124662 R 366394 CDS YP_001314749.1 150378154 5320506 complement(1126438..1127418) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0849 SyrM transcriptional regulator; LysR family transcriptional regulator 1127418 5320506 Smed_6204 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314749.1 1126438 R 366394 CDS YP_001314750.1 150378155 5320507 complement(1127473..1127886) 1 NC_009621.1 KEGG: sme:SMa0848 hypothetical protein; hypothetical protein 1127886 5320507 Smed_6205 Sinorhizobium medicae WSM419 hypothetical protein YP_001314750.1 1127473 R 366394 CDS YP_001314751.1 150378156 5320511 1131315..1131665 1 NC_009621.1 hypothetical protein 1131665 5320511 Smed_6209 Sinorhizobium medicae WSM419 hypothetical protein YP_001314751.1 1131315 D 366394 CDS YP_001314752.1 150378157 5320513 1132358..1132528 1 NC_009621.1 hypothetical protein 1132528 5320513 Smed_6211 Sinorhizobium medicae WSM419 hypothetical protein YP_001314752.1 1132358 D 366394 CDS YP_001314753.1 150378158 5320514 1132969..1133928 1 NC_009621.1 PFAM: regulatory protein LysR; KEGG: sme:SMa0840 NodD3 transcriptional regulator; LysR family transcriptional regulator 1133928 5320514 Smed_6212 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314753.1 1132969 D 366394 CDS YP_001314754.1 150378159 5320516 complement(1135226..1136371) 1 NC_009621.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: nha:Nham_4315 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 1136371 5320516 Smed_6214 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001314754.1 1135226 R 366394 CDS YP_001314755.1 150378160 5320519 complement(1138091..1138336) 1 NC_009621.1 KEGG: sme:SMa0838 SyrA protein involved in EPS production; SyrA protein involved in EPS production 1138336 5320519 Smed_6217 Sinorhizobium medicae WSM419 SyrA protein involved in EPS production YP_001314755.1 1138091 R 366394 CDS YP_001314756.1 150378161 5320521 complement(1139387..1139704) 1 NC_009621.1 TIGRFAM: Ferredoxin III 4[4Fe-4S] nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMa0834 FdxB ferredoxin III; ferredoxin III 4(4Fe-4S) nif-specific 1139704 5320521 Smed_6219 Sinorhizobium medicae WSM419 ferredoxin III 4(4Fe-4S) nif-specific YP_001314756.1 1139387 R 366394 CDS YP_001314757.1 150378162 5320522 complement(1139701..1139904) 1 NC_009621.1 PFAM: protein of unknown function DUF683; KEGG: mlo:msr5868 hypothetical protein; hypothetical protein 1139904 5320522 Smed_6220 Sinorhizobium medicae WSM419 hypothetical protein YP_001314757.1 1139701 R 366394 CDS YP_001314758.1 150378163 5320523 complement(1140378..1140875) 1 NC_009621.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: sme:SMa0831 NifX nitrogen fixation protein; nitrogen fixation protein NifX 1140875 5320523 Smed_6221 Sinorhizobium medicae WSM419 nitrogen fixation protein NifX YP_001314758.1 1140378 R 366394 CDS YP_001314759.1 150378164 5320524 complement(1141362..1142789) 1 NC_009621.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 1142789 5320524 Smed_6222 Sinorhizobium medicae WSM419 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_001314759.1 1141362 R 366394 CDS YP_001314760.1 150378165 5320525 complement(1142843..1144384) 1 NC_009621.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: sme:SMa0829 NifK nitrogenase Fe-Mo beta chain; nitrogenase molybdenum-iron protein beta chain 1144384 5320525 Smed_6223 Sinorhizobium medicae WSM419 nitrogenase molybdenum-iron protein beta chain YP_001314760.1 1142843 R 366394 CDS YP_001314761.1 150378166 5320526 complement(1144475..1145977) 1 NC_009621.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; KEGG: sme:SMa0827 NifD nitrogenase Fe-Mo alpha chain; nitrogenase molybdenum-iron protein alpha chain 1145977 5320526 Smed_6224 Sinorhizobium medicae WSM419 nitrogenase molybdenum-iron protein alpha chain YP_001314761.1 1144475 R 366394 CDS YP_001314762.1 150378167 5320527 complement(1146077..1146970) 1 NC_009621.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1146970 nifH 5320527 nifH Sinorhizobium medicae WSM419 nitrogenase reductase YP_001314762.1 1146077 R 366394 CDS YP_001314763.1 150378168 5320528 complement(1146993..1147394) 1 NC_009621.1 KEGG: sme:SMa0824 hypothetical protein; hypothetical protein 1147394 5320528 Smed_6226 Sinorhizobium medicae WSM419 hypothetical protein YP_001314763.1 1146993 R 366394 CDS YP_001314764.1 150378169 5320530 1149181..1150068 1 NC_009621.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sme:SMa0822 FixA electron transfer flavoprotein beta chain; electron transfer flavoprotein alpha/beta-subunit 1150068 5320530 Smed_6228 Sinorhizobium medicae WSM419 electron transfer flavoprotein alpha/beta-subunit YP_001314764.1 1149181 D 366394 CDS YP_001314765.1 150378170 5320531 1150049..1151161 1 NC_009621.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: sme:SMa0819 FixB electron transfer flavoprotein alpha chain; electron transfer flavoprotein alpha/beta-subunit 1151161 5320531 Smed_6229 Sinorhizobium medicae WSM419 electron transfer flavoprotein alpha/beta-subunit YP_001314765.1 1150049 D 366394 CDS YP_001314766.1 150378171 5320532 1151173..1152480 1 NC_009621.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMa0817 FixC oxidoreductase; FAD dependent oxidoreductase 1152480 5320532 Smed_6230 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001314766.1 1151173 D 366394 CDS YP_001314767.1 150378172 5320533 1152493..1152789 1 NC_009621.1 KEGG: sme:SMa0816 FixX ferredoxin-like protein; FixX ferredoxin-like protein 1152789 5320533 Smed_6231 Sinorhizobium medicae WSM419 FixX ferredoxin-like protein YP_001314767.1 1152493 D 366394 CDS YP_001314768.1 150378173 5320534 1153011..1154636 1 NC_009621.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMa0815 NifA transcriptional activator; transcriptional regulator NifA 1154636 5320534 Smed_6232 Sinorhizobium medicae WSM419 transcriptional regulator NifA YP_001314768.1 1153011 D 366394 CDS YP_001314769.1 150378174 5320535 1154850..1156322 1 NC_009621.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: sme:SMa0814 NifB FeMo cofactor biosynthesis protein; nitrogenase cofactor biosynthesis protein NifB 1156322 5320535 Smed_6233 Sinorhizobium medicae WSM419 nitrogenase cofactor biosynthesis protein NifB YP_001314769.1 1154850 D 366394 CDS YP_001314770.1 150378175 5320536 1156354..1156548 1 NC_009621.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMa0811 FdxN ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1156548 5320536 Smed_6234 Sinorhizobium medicae WSM419 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001314770.1 1156354 D 366394 CDS YP_001314771.1 150378176 5320537 1156737..1156943 1 NC_009621.1 PFAM: NifT/FixU family protein; KEGG: sme:SMa0810 FixU nitrogen fixation protein; NifT/FixU family protein 1156943 5320537 Smed_6235 Sinorhizobium medicae WSM419 NifT/FixU family protein YP_001314771.1 1156737 D 366394 CDS YP_001314772.1 150378177 5320539 1159355..1159582 1 NC_009621.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMb20935 putative transcriptional regulator protein; XRE family transcriptional regulator 1159582 5320539 Smed_6237 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314772.1 1159355 D 366394 CDS YP_001314773.1 150378178 5320541 1160267..1161385 1 NC_009621.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: mlo:mll9195 transposase; transposase IS116/IS110/IS902 family protein 1161385 5320541 Smed_6239 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001314773.1 1160267 D 366394 CDS YP_001314774.1 150378179 5320542 complement(1161490..1162617) 1 NC_009621.1 PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein; integrase catalytic protein 1162617 5320542 Smed_6240 Sinorhizobium medicae WSM419 integrase catalytic protein YP_001314774.1 1161490 R 366394 CDS YP_001314775.1 150378180 5320543 complement(1162611..1162877) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein; transposase IS3/IS911 family protein 1162877 5320543 Smed_6241 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314775.1 1162611 R 366394 CDS YP_001314776.1 150378181 5320546 complement(1164395..1164850) 1 NC_009621.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMa0806 probable SyrB-like regulator; transposase IS3/IS911 family protein 1164850 5320546 Smed_6244 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314776.1 1164395 R 366394 CDS YP_001314777.1 150378182 5320547 complement(1165205..1166677) 1 NC_009621.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0805 GabD4 succinate-semialdehyde dehdyrogenase; succinic semialdehyde dehydrogenase 1166677 5320547 Smed_6245 Sinorhizobium medicae WSM419 succinic semialdehyde dehydrogenase YP_001314777.1 1165205 R 366394 CDS YP_001314778.1 150378183 5320548 complement(1166757..1167836) 1 NC_009621.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0803 putative ABC-transporter ATP-binding protein; ABC transporter-like protein 1167836 5320548 Smed_6246 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001314778.1 1166757 R 366394 CDS YP_001314779.1 150378184 5320549 complement(1167833..1168633) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0802 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1168633 5320549 Smed_6247 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314779.1 1167833 R 366394 CDS YP_001314780.1 150378185 5320550 complement(1168635..1169510) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0800 putative ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component 1169510 5320550 Smed_6248 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314780.1 1168635 R 366394 CDS YP_001314781.1 150378186 5320551 complement(1169603..1170613) 1 NC_009621.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMa0799 putative ABC transporter, periplasmic solute-binding protein; extracellular solute-binding protein 1170613 5320551 Smed_6249 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314781.1 1169603 R 366394 CDS YP_001314782.1 150378187 5320552 complement(1170651..1170977) 1 NC_009621.1 PFAM: NIPSNAP family containing protein; KEGG: sme:SMa0797 hypothetical protein; NIPSNAP family protein 1170977 5320552 Smed_6250 Sinorhizobium medicae WSM419 NIPSNAP family protein YP_001314782.1 1170651 R 366394 CDS YP_001314783.1 150378188 5320553 complement(1170983..1172446) 1 NC_009621.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMa0796 probable aldehyde dehydrogenase; aldehyde dehydrogenase 1172446 5320553 Smed_6251 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001314783.1 1170983 R 366394 CDS YP_001314784.1 150378189 5320554 complement(1172452..1173492) 1 NC_009621.1 PFAM: luciferase family protein; KEGG: sme:SMa0794 hypothetical protein; luciferase family protein 1173492 5320554 Smed_6252 Sinorhizobium medicae WSM419 luciferase family protein YP_001314784.1 1172452 R 366394 CDS YP_001314785.1 150378190 5320555 complement(1173489..1174424) 1 NC_009621.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMa0793 hypothetical protein with local similarity; flavin reductase domain-containing protein 1174424 5320555 Smed_6253 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001314785.1 1173489 R 366394 CDS YP_001314786.1 150378191 5320556 complement(1174421..1175254) 1 NC_009621.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMa0792 hypothetical protein with local similarity; alpha/beta hydrolase fold protein 1175254 5320556 Smed_6254 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001314786.1 1174421 R 366394 CDS YP_001314787.1 150378192 5320557 complement(1175273..1175875) 1 NC_009621.1 PFAM: protein of unknown function DUF1185; KEGG: sme:SMa0791 hypothetical protein with local similarity; hypothetical protein 1175875 5320557 Smed_6255 Sinorhizobium medicae WSM419 hypothetical protein YP_001314787.1 1175273 R 366394 CDS YP_001314788.1 150378193 5320558 1176135..1176281 1 NC_009621.1 KEGG: sme:SMa0790 hypothetical protein; hypothetical protein 1176281 5320558 Smed_6256 Sinorhizobium medicae WSM419 hypothetical protein YP_001314788.1 1176135 D 366394 CDS YP_001314789.1 150378194 5320559 complement(1176339..1177034) 1 NC_009621.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: atc:AGR_L_1259 hypothetical protein; GntR family transcriptional regulator 1177034 5320559 Smed_6257 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314789.1 1176339 R 366394 CDS YP_001314790.1 150378195 5320560 complement(join(1177840..1178442,1178442..1178786)) 1 NC_009621.1 KEGG: nha:Nham_4172 ISSpo6, transposase orf A; transposase 1178786 5320560 Smed_6258 Sinorhizobium medicae WSM419 transposase YP_001314790.1 1177840 R 366394 CDS YP_001314791.1 150378196 5320561 join(1179221..1179550,1179550..1180002) 1 NC_009621.1 KEGG: gox:GOX2729 transposase; hypothetical protein 1180002 5320561 Smed_6259 Sinorhizobium medicae WSM419 hypothetical protein YP_001314791.1 1179221 D 366394 CDS YP_001314792.1 150378197 5320562 complement(1180047..1181708) 1 NC_009621.1 KEGG: sme:SMa0774 NoeB host specific nodulation protein; NoeB host specific nodulation protein 1181708 5320562 Smed_6260 Sinorhizobium medicae WSM419 NoeB host specific nodulation protein YP_001314792.1 1180047 R 366394 CDS YP_001314793.1 150378198 5320563 complement(1181715..1183118) 1 NC_009621.1 KEGG: sme:SMa0773 NoeA host specific nodulation protein; NoeA host specific nodulation protein 1183118 5320563 Smed_6261 Sinorhizobium medicae WSM419 NoeA host specific nodulation protein YP_001314793.1 1181715 R 366394 CDS YP_001314794.1 150378199 5320564 complement(1183123..1183338) 1 NC_009621.1 hypothetical protein 1183338 5320564 Smed_6262 Sinorhizobium medicae WSM419 hypothetical protein YP_001314794.1 1183123 R 366394 CDS YP_001314795.1 150378200 5320565 complement(1183535..1184086) 1 NC_009621.1 KEGG: sme:SMa0772 NodL Nod factor acetyltransferase; maltose O-acetyltransferase 1184086 5320565 Smed_6263 Sinorhizobium medicae WSM419 maltose O-acetyltransferase YP_001314795.1 1183535 R 366394 CDS YP_001314796.1 150378201 5320566 complement(1184358..1185302) 1 NC_009621.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sme:SMa1209 FixI1 copper transport ATPase; heavy metal transport/detoxification protein 1185302 5320566 Smed_6264 Sinorhizobium medicae WSM419 heavy metal transport/detoxification protein YP_001314796.1 1184358 R 366394 CDS YP_001314797.1 150378202 5320567 complement(1185336..1186205) 1 NC_009621.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sme:SMa1213 FixP1 Di-heme cytochrome c; cytochrome c oxidase, cbb3-type subunit III 1186205 5320567 Smed_6265 Sinorhizobium medicae WSM419 cytochrome c oxidase, cbb3-type subunit III YP_001314797.1 1185336 R 366394 CDS YP_001314798.1 150378203 5320568 complement(1186209..1186361) 1 NC_009621.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: sme:SMa1214 FixQ1 cbb3-type cytochrome oxidase; Cbb3-type cytochrome oxidase component 1186361 5320568 Smed_6266 Sinorhizobium medicae WSM419 Cbb3-type cytochrome oxidase component YP_001314798.1 1186209 R 366394 CDS YP_001314799.1 150378204 5320569 complement(1186374..1187105) 1 NC_009621.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1187105 5320569 Smed_6267 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit II YP_001314799.1 1186374 R 366394 CDS YP_001314800.1 150378205 5320570 complement(1187119..1188738) 1 NC_009621.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1188738 5320570 Smed_6268 Sinorhizobium medicae WSM419 cbb3-type cytochrome c oxidase subunit I YP_001314800.1 1187119 R 366394 CDS YP_001314801.1 150378206 5320571 complement(1189124..1189579) 1 NC_009621.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sme:SMa1223 conserved hypothetical protein (ORF151); pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1189579 5320571 Smed_6269 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001314801.1 1189124 R 366394 CDS YP_001314802.1 150378207 5320572 complement(1189660..1190295) 1 NC_009621.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 1190295 fixK 5320572 fixK Sinorhizobium medicae WSM419 transcriptional regulator FixK YP_001314802.1 1189660 R 366394 CDS YP_001314803.1 150378208 5320574 complement(join(1190610..1191110,1191109..1191525)) 1 NC_009621.1 PFAM: transposase IS111A/IS1328/IS1533; KEGG: hne:HNE_3101 ISHne5, transposase; transposase IS111A/IS1328/IS1533 1191525 5320574 Smed_6272 Sinorhizobium medicae WSM419 transposase IS111A/IS1328/IS1533 YP_001314803.1 1190610 R 366394 CDS YP_001314804.1 150378209 5320575 complement(1191956..1192570) 1 NC_009621.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 1192570 fixJ 5320575 fixJ Sinorhizobium medicae WSM419 response regulator FixJ YP_001314804.1 1191956 R 366394 CDS YP_001314805.1 150378210 5320576 complement(1192563..1194167) 1 NC_009621.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sme:SMa1229 FixL oxygen regulated histidine kinase; multi-sensor signal transduction histidine kinase 1194167 5320576 Smed_6274 Sinorhizobium medicae WSM419 multi-sensor signal transduction histidine kinase YP_001314805.1 1192563 R 366394 CDS YP_001314806.1 150378211 5320577 complement(1194427..1194870) 1 NC_009621.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: sme:SMa1243 Azu1 pseudoazurin (blue copper protein); pseudoazurin 1194870 5320577 Smed_6275 Sinorhizobium medicae WSM419 pseudoazurin YP_001314806.1 1194427 R 366394 CDS YP_001314807.1 150378212 5320578 complement(1194980..1195675) 1 NC_009621.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: sme:SMa1245 putative crp/fnr-like transcriptional regulator; CRP/FNR family transcriptional regulator 1195675 5320578 Smed_6276 Sinorhizobium medicae WSM419 CRP/FNR family transcriptional regulator YP_001314807.1 1194980 R 366394 CDS YP_001314808.1 150378213 5320579 complement(1195820..1196734) 1 NC_009621.1 PFAM: protein of unknown function DUF323; KEGG: sme:SMa1247 NirV periplasmic nitrate reductase; hypothetical protein 1196734 5320579 Smed_6277 Sinorhizobium medicae WSM419 hypothetical protein YP_001314808.1 1195820 R 366394 CDS YP_001314809.1 150378214 5320580 complement(1196837..1197967) 1 NC_009621.1 TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sme:SMa1250 putative NirK Cu-nitrite reductase; nitrite reductase, copper-containing 1197967 5320580 Smed_6278 Sinorhizobium medicae WSM419 nitrite reductase, copper-containing YP_001314809.1 1196837 R 366394 CDS YP_001314810.1 150378215 5320581 1198212..1199423 1 NC_009621.1 PFAM: NnrS family protein; KEGG: sme:SMa1252 putative uncharacterized protein involved in response to NO; NnrS family protein 1199423 5320581 Smed_6279 Sinorhizobium medicae WSM419 NnrS family protein YP_001314810.1 1198212 D 366394 CDS YP_001314811.1 150378216 5320582 complement(1200262..1200555) 1 NC_009621.1 PFAM: protein of unknown function DUF59; KEGG: sme:SMa1255 hypothetical protein; hypothetical protein 1200555 5320582 Smed_6280 Sinorhizobium medicae WSM419 hypothetical protein YP_001314811.1 1200262 R 366394 CDS YP_001314812.1 150378217 5320583 complement(1200560..1201090) 1 NC_009621.1 KEGG: sme:SMa1256 hypothetical protein; hypothetical protein 1201090 5320583 Smed_6281 Sinorhizobium medicae WSM419 hypothetical protein YP_001314812.1 1200560 R 366394 CDS YP_001314813.1 150378218 5320584 complement(1201094..1202452) 1 NC_009621.1 KEGG: sme:SMa1259 hypothetical protein; hypothetical protein 1202452 5320584 Smed_6282 Sinorhizobium medicae WSM419 hypothetical protein YP_001314813.1 1201094 R 366394 CDS YP_001314814.1 150378219 5320585 complement(1202495..1202812) 1 NC_009621.1 KEGG: sme:SMa1261 hypothetical protein; hypothetical protein 1202812 5320585 Smed_6283 Sinorhizobium medicae WSM419 hypothetical protein YP_001314814.1 1202495 R 366394 CDS YP_001314815.1 150378220 5320586 complement(1203056..1203202) 1 NC_009621.1 KEGG: bmb:BruAb1_0666 hypothetical protein; hypothetical protein 1203202 5320586 Smed_6284 Sinorhizobium medicae WSM419 hypothetical protein YP_001314815.1 1203056 R 366394 CDS YP_001314816.1 150378221 5320587 1203581..1204933 1 NC_009621.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1204933 5320587 Smed_6285 Sinorhizobium medicae WSM419 coproporphyrinogen III oxidase YP_001314816.1 1203581 D 366394 CDS YP_001314817.1 150378222 5320588 complement(1205013..1206908) 1 NC_009621.1 PFAM: von Willebrand factor type A; KEGG: sme:SMa1269 NorD protein required for nitric oxide reductase (Nor) activity; von Willebrand factor type A 1206908 5320588 Smed_6286 Sinorhizobium medicae WSM419 von Willebrand factor type A YP_001314817.1 1205013 R 366394 CDS YP_001314818.1 150378223 5320589 complement(1206913..1207731) 1 NC_009621.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: sme:SMa1272 NorQ protein required for nitric oxide reductase activity; ATPase 1207731 5320589 Smed_6287 Sinorhizobium medicae WSM419 ATPase YP_001314818.1 1206913 R 366394 CDS YP_001314819.1 150378224 5320590 complement(1207795..1209141) 1 NC_009621.1 PFAM: cytochrome c oxidase subunit I; KEGG: sme:SMa1273 NorB nitric oxide reductase; nitric-oxide reductase 1209141 5320590 Smed_6288 Sinorhizobium medicae WSM419 nitric-oxide reductase YP_001314819.1 1207795 R 366394 CDS YP_001314820.1 150378225 5320591 complement(1209166..1209618) 1 NC_009621.1 PFAM: cytochrome c class I; KEGG: sme:SMa1276 NorC nitric oxide reductase; cytochrome c class I 1209618 5320591 Smed_6289 Sinorhizobium medicae WSM419 cytochrome c class I YP_001314820.1 1209166 R 366394 CDS YP_001314821.1 150378226 5320592 complement(1209782..1210072) 1 NC_009621.1 KEGG: bja:bsr3213 hypothetical protein; hypothetical protein 1210072 5320592 Smed_6290 Sinorhizobium medicae WSM419 hypothetical protein YP_001314821.1 1209782 R 366394 CDS YP_001314822.1 150378227 5320593 complement(1210078..1210629) 1 NC_009621.1 PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMa1279 NorE protein involved in nitric oxide reduction; cytochrome c oxidase subunit III 1210629 5320593 Smed_6291 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit III YP_001314822.1 1210078 R 366394 CDS YP_001314823.1 150378228 5320594 1210748..1210903 1 NC_009621.1 KEGG: atc:AGR_L_947 hypothetical protein; hypothetical protein 1210903 5320594 Smed_6292 Sinorhizobium medicae WSM419 hypothetical protein YP_001314823.1 1210748 D 366394 CDS YP_001314824.1 150378229 5320595 1210920..1211318 1 NC_009621.1 KEGG: rle:pRL90022 hypothetical protein; hypothetical protein 1211318 5320595 Smed_6293 Sinorhizobium medicae WSM419 hypothetical protein YP_001314824.1 1210920 D 366394 CDS YP_001314825.1 150378230 5320596 1211330..1212016 1 NC_009621.1 PFAM: NnrUfamily protein; KEGG: sme:SMa1283 probable NnrU protein; NnrU family protein 1212016 5320596 Smed_6294 Sinorhizobium medicae WSM419 NnrU family protein YP_001314825.1 1211330 D 366394 CDS YP_001314826.1 150378231 5320597 complement(1212235..1212840) 1 NC_009621.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1212840 5320597 Smed_6295 Sinorhizobium medicae WSM419 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001314826.1 1212235 R 366394 CDS YP_001314827.1 150378232 5320598 complement(1212837..1214345) 1 NC_009621.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: sme:SMa1288 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 1214345 5320598 Smed_6296 Sinorhizobium medicae WSM419 UbiD family decarboxylase YP_001314827.1 1212837 R 366394 CDS YP_001314828.1 150378233 5320599 1214464..1214970 1 NC_009621.1 KEGG: sme:SMa1289 hypothetical protein; hypothetical protein 1214970 5320599 Smed_6297 Sinorhizobium medicae WSM419 hypothetical protein YP_001314828.1 1214464 D 366394 CDS YP_001314829.1 150378234 5320600 1214961..1215938 1 NC_009621.1 PFAM: peptidase U32; KEGG: sme:SMa1291 probable proteinase; peptidase U32 1215938 5320600 Smed_6298 Sinorhizobium medicae WSM419 peptidase U32 YP_001314829.1 1214961 D 366394 CDS YP_001314830.1 150378235 5320602 1216874..1217320 1 NC_009621.1 KEGG: sme:SMa1294 hypothetical protein; hypothetical protein 1217320 5320602 Smed_6300 Sinorhizobium medicae WSM419 hypothetical protein YP_001314830.1 1216874 D 366394 CDS YP_001314831.1 150378236 5320603 complement(1217327..1217692) 1 NC_009621.1 hypothetical protein 1217692 5320603 Smed_6301 Sinorhizobium medicae WSM419 hypothetical protein YP_001314831.1 1217327 R 366394 CDS YP_001314832.1 150378237 5320604 1217802..1219088 1 NC_009621.1 KEGG: sme:SMc02590 hypothetical protein; hypothetical protein 1219088 5320604 Smed_6302 Sinorhizobium medicae WSM419 hypothetical protein YP_001314832.1 1217802 D 366394 CDS YP_001314833.1 150378238 5320605 complement(1219081..1219617) 1 NC_009621.1 KEGG: sme:SMc02591 hypothetical protein; hypothetical protein 1219617 5320605 Smed_6303 Sinorhizobium medicae WSM419 hypothetical protein YP_001314833.1 1219081 R 366394 CDS YP_001314834.1 150378239 5320606 complement(1219620..1220204) 1 NC_009621.1 KEGG: sme:SMc02592 hypothetical protein; hypothetical protein 1220204 5320606 Smed_6304 Sinorhizobium medicae WSM419 hypothetical protein YP_001314834.1 1219620 R 366394 CDS YP_001314835.1 150378240 5320607 complement(1220201..1220797) 1 NC_009621.1 KEGG: sme:SMc02593 hypothetical protein; hypothetical protein 1220797 5320607 Smed_6305 Sinorhizobium medicae WSM419 hypothetical protein YP_001314835.1 1220201 R 366394 CDS YP_001314836.1 150378241 5320608 complement(1220931..1221149) 1 NC_009621.1 KEGG: mag:amb3605 hypothetical protein; hypothetical protein 1221149 5320608 Smed_6306 Sinorhizobium medicae WSM419 hypothetical protein YP_001314836.1 1220931 R 366394 CDS YP_001314837.1 150378242 5320609 complement(1221206..1222498) 1 NC_009621.1 KEGG: sme:SMa0403 hypothetical protein; hypothetical protein 1222498 5320609 Smed_6307 Sinorhizobium medicae WSM419 hypothetical protein YP_001314837.1 1221206 R 366394 CDS YP_001314838.1 150378243 5320610 complement(1222543..1223274) 1 NC_009621.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMa0402 putative GntR-type regulator; GntR family transcriptional regulator 1223274 5320610 Smed_6308 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001314838.1 1222543 R 366394 CDS YP_001314839.1 150378244 5320611 complement(1223337..1224350) 1 NC_009621.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMa0400 putative zinc-binding; alcohol dehydrogenase 1224350 5320611 Smed_6309 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001314839.1 1223337 R 366394 CDS YP_001314840.1 150378245 5320612 complement(1224354..1225682) 1 NC_009621.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1225682 5320612 Smed_6310 Sinorhizobium medicae WSM419 histidinol dehydrogenase YP_001314840.1 1224354 R 366394 CDS YP_001314841.1 150378246 5320613 complement(1225722..1226522) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0396 putative ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 1226522 5320613 Smed_6311 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314841.1 1225722 R 366394 CDS YP_001314842.1 150378247 5320614 complement(1226519..1227463) 1 NC_009621.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0394 putative ABC transporter, permease; binding-protein-dependent transport systems inner membrane component 1227463 5320614 Smed_6312 Sinorhizobium medicae WSM419 binding-protein-dependent transport systems inner membrane component YP_001314842.1 1226519 R 366394 CDS YP_001314843.1 150378248 5320615 complement(1227529..1228644) 1 NC_009621.1 KEGG: sme:SMa0392 ABC transporter, periplasmic solute-binding protein; ABC transporter, periplasmic solute-binding protein 1228644 5320615 Smed_6313 Sinorhizobium medicae WSM419 ABC transporter, periplasmic solute-binding protein YP_001314843.1 1227529 R 366394 CDS YP_001314844.1 150378249 5320616 complement(1228678..1229811) 1 NC_009621.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein; spermidine/putrescine ABC transporter ATPase subunit 1229811 5320616 Smed_6314 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase subunit YP_001314844.1 1228678 R 366394 CDS YP_001314845.1 150378250 5320617 complement(1230115..1230882) 1 NC_009621.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMa0389 putative dehydrogenase; short-chain dehydrogenase/reductase SDR 1230882 5320617 Smed_6315 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001314845.1 1230115 R 366394 CDS YP_001314846.1 150378251 5320618 1231003..1232115 1 NC_009621.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate and L-glutamate from L-histidinol phosphate and 2-oxoglutarate; histidinol-phosphate aminotransferase 1232115 5320618 Smed_6316 Sinorhizobium medicae WSM419 histidinol-phosphate aminotransferase YP_001314846.1 1231003 D 366394 CDS YP_001314847.1 150378252 5320619 complement(1232158..1233588) 1 NC_009621.1 KEGG: mes:Meso_0173 hypothetical protein; hypothetical protein 1233588 5320619 Smed_6317 Sinorhizobium medicae WSM419 hypothetical protein YP_001314847.1 1232158 R 366394 CDS YP_001314848.1 150378253 5320620 1233716..1234606 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: btl:BALH_3308 transcriptional regulator, LysR family; LysR family transcriptional regulator 1234606 5320620 Smed_6318 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314848.1 1233716 D 366394 CDS YP_001314849.1 150378254 5320621 complement(1234666..1235115) 1 NC_009621.1 KEGG: sme:SMc00591 hypothetical/unknown signal peptide protein; hypothetical protein 1235115 5320621 Smed_6319 Sinorhizobium medicae WSM419 hypothetical protein YP_001314849.1 1234666 R 366394 CDS YP_001314850.1 150378255 5320622 1235306..1236025 1 NC_009621.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: aha:AHA_3966 DNA-binding response regulator; two component transcriptional regulator 1236025 5320622 Smed_6320 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001314850.1 1235306 D 366394 CDS YP_001314851.1 150378256 5320623 1236025..1236603 1 NC_009621.1 hypothetical protein 1236603 5320623 Smed_6321 Sinorhizobium medicae WSM419 hypothetical protein YP_001314851.1 1236025 D 366394 CDS YP_001314852.1 150378257 5320624 1236630..1237460 1 NC_009621.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pde:Pden_3232 histidine kinase; histidine kinase 1237460 5320624 Smed_6322 Sinorhizobium medicae WSM419 histidine kinase YP_001314852.1 1236630 D 366394 CDS YP_001314853.1 150378258 5320625 1237675..1238067 1 NC_009621.1 PFAM: cytochrome c class I; KEGG: sme:SMa1487 probable C-type cytochrome; cytochrome c class I 1238067 5320625 Smed_6323 Sinorhizobium medicae WSM419 cytochrome c class I YP_001314853.1 1237675 D 366394 CDS YP_001314854.1 150378259 5320626 1238145..1238615 1 NC_009621.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: hne:HNE_2483 putative isoquinoline 1-oxidoreductase, alpha subunit; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1238615 5320626 Smed_6324 Sinorhizobium medicae WSM419 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001314854.1 1238145 D 366394 CDS YP_001314855.1 150378260 5320628 1240871..1242181 1 NC_009621.1 KEGG: sme:SMa1833 probable L-sorbosone dehydrogenase; putative L-sorbosone dehydrogenase 1242181 5320628 Smed_6326 Sinorhizobium medicae WSM419 putative L-sorbosone dehydrogenase YP_001314855.1 1240871 D 366394 CDS YP_001314856.1 150378261 5320629 complement(1242248..1243123) 1 NC_009621.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1602 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 1243123 5320629 Smed_6327 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314856.1 1242248 R 366394 CDS YP_001314857.1 150378262 5320630 1243208..1244299 1 NC_009621.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sme:SMa1604 putative oxidoreductase; NADH:flavin oxidoreductase/NADH oxidase 1244299 5320630 Smed_6328 Sinorhizobium medicae WSM419 NADH:flavin oxidoreductase/NADH oxidase YP_001314857.1 1243208 D 366394 CDS YP_001314858.1 150378264 5320633 297..965 1 NC_009622.1 KEGG: bja:bll1417 hypothetical protein; hypothetical protein 965 5320633 Smed_6330 Sinorhizobium medicae WSM419 hypothetical protein YP_001314858.1 297 D 366394 CDS YP_001314859.1 150378265 5320634 complement(1324..1503) 1 NC_009622.1 hypothetical protein 1503 5320634 Smed_6331 Sinorhizobium medicae WSM419 hypothetical protein YP_001314859.1 1324 R 366394 CDS YP_001314860.1 150378266 5320635 1637..2701 1 NC_009622.1 PFAM: glycoside hydrolase family 25; KEGG: bms:BRA0487 glycosyl hydrolase, family 25; glycoside hydrolase family protein 2701 5320635 Smed_6332 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001314860.1 1637 D 366394 CDS YP_001314861.1 150378267 5320636 2698..3741 1 NC_009622.1 hypothetical protein 3741 5320636 Smed_6333 Sinorhizobium medicae WSM419 hypothetical protein YP_001314861.1 2698 D 366394 CDS YP_001314862.1 150378268 5320637 3862..4248 1 NC_009622.1 hypothetical protein 4248 5320637 Smed_6334 Sinorhizobium medicae WSM419 hypothetical protein YP_001314862.1 3862 D 366394 CDS YP_001314863.1 150378269 5320638 4381..5304 1 NC_009622.1 PFAM: homocysteine S-methyltransferase; KEGG: mes:Meso_0624 homocysteine S-methyltransferase; homocysteine S-methyltransferase 5304 5320638 Smed_6335 Sinorhizobium medicae WSM419 homocysteine S-methyltransferase YP_001314863.1 4381 D 366394 CDS YP_001314864.1 150378270 5320641 6172..6639 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03250 hypothetical protein; transposase IS3/IS911 family protein 6639 5320641 Smed_6338 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314864.1 6172 D 366394 CDS YP_001314865.1 150378271 5320642 6620..6973 1 NC_009622.1 PFAM: IS66 Orf2 family protein; KEGG: nha:Nham_3807 IS66 Orf2 like; IS66 Orf2 family protein 6973 5320642 Smed_6339 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314865.1 6620 D 366394 CDS YP_001314866.1 150378272 5320643 7027..8619 1 NC_009622.1 PFAM: transposase IS66; KEGG: nha:Nham_2793 transposase IS66; transposase IS66 8619 5320643 Smed_6340 Sinorhizobium medicae WSM419 transposase IS66 YP_001314866.1 7027 D 366394 CDS YP_001314867.1 150378273 5320644 complement(8597..10486) 1 NC_009622.1 TIGRFAM: PAS sensor protein; PFAM: MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; KEGG: ret:RHE_PF00076 chemotaxis methyltransferase protein; putative PAS/PAC sensor protein 10486 5320644 Smed_6341 Sinorhizobium medicae WSM419 putative PAS/PAC sensor protein YP_001314867.1 8597 R 366394 CDS YP_001314868.1 150378274 5320645 complement(10537..11547) 1 NC_009622.1 PFAM: CheB methylesterase; MCP methyltransferase CheR-type; KEGG: rfr:Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; CheB methylesterase 11547 5320645 Smed_6342 Sinorhizobium medicae WSM419 CheB methylesterase YP_001314868.1 10537 R 366394 CDS YP_001314869.1 150378275 5320646 complement(11534..11827) 1 NC_009622.1 hypothetical protein 11827 5320646 Smed_6343 Sinorhizobium medicae WSM419 hypothetical protein YP_001314869.1 11534 R 366394 CDS YP_001314870.1 150378276 5320647 complement(12118..12594) 1 NC_009622.1 KEGG: sme:SMa1875 putative reverse transcriptase; putative reverse transcriptase 12594 5320647 Smed_6344 Sinorhizobium medicae WSM419 putative reverse transcriptase YP_001314870.1 12118 R 366394 CDS YP_001314871.1 150378277 5320648 complement(13165..13722) 1 NC_009622.1 PFAM: transposase mutator type; KEGG: rpc:RPC_3939 transposase, mutator type; transposase mutator type 13722 5320648 Smed_6345 Sinorhizobium medicae WSM419 transposase mutator type YP_001314871.1 13165 R 366394 CDS YP_001314872.1 150378278 5320649 14195..14617 1 NC_009622.1 PFAM: protein of unknown function DUF1452; KEGG: sme:SMb21472 hypothetical protein; hypothetical protein 14617 5320649 Smed_6346 Sinorhizobium medicae WSM419 hypothetical protein YP_001314872.1 14195 D 366394 CDS YP_001314873.1 150378279 5320650 15134..15307 1 NC_009622.1 KEGG: sme:SMb21683 hypothetical protein; hypothetical protein 15307 5320650 Smed_6347 Sinorhizobium medicae WSM419 hypothetical protein YP_001314873.1 15134 D 366394 CDS YP_001314874.1 150378280 5320651 complement(15715..16176) 1 NC_009622.1 PFAM: MgtC/SapB transporter; KEGG: sus:Acid_7726 MgtC/SapB transporter; MgtC/SapB transporter 16176 5320651 Smed_6348 Sinorhizobium medicae WSM419 MgtC/SapB transporter YP_001314874.1 15715 R 366394 CDS YP_001314875.1 150378281 5320653 complement(16538..17029) 1 NC_009622.1 KEGG: rpc:RPC_3624 hypothetical protein; hypothetical protein 17029 5320653 Smed_6350 Sinorhizobium medicae WSM419 hypothetical protein YP_001314875.1 16538 R 366394 CDS YP_001314876.1 150378282 5320654 17385..19199 1 NC_009622.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sus:Acid_6912 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 19199 5320654 Smed_6351 Sinorhizobium medicae WSM419 Pyrrolo-quinoline quinone YP_001314876.1 17385 D 366394 CDS YP_001314877.1 150378283 5320655 19180..20001 1 NC_009622.1 SMART: extracellular solute-binding protein family 3; KEGG: sus:Acid_6911 extracellular solute-binding protein, family 3; extracellular solute-binding protein 20001 5320655 Smed_6352 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001314877.1 19180 D 366394 CDS YP_001314878.1 150378284 5320656 19998..20555 1 NC_009622.1 PFAM: cytochrome c class I; KEGG: mlo:mll9632 cytochrome c oxidase subunit III; cytochrome c class I 20555 5320656 Smed_6353 Sinorhizobium medicae WSM419 cytochrome c class I YP_001314878.1 19998 D 366394 CDS YP_001314879.1 150378285 5320657 20563..21567 1 NC_009622.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: ret:RHE_PB00065 probable cytochrome c oxidase subunit II protein; cytochrome c oxidase subunit II 21567 5320657 Smed_6354 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit II YP_001314879.1 20563 D 366394 CDS YP_001314880.1 150378286 5320658 21564..23471 1 NC_009622.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: ret:RHE_PB00064 probable cytochrome c oxidase subunit I protein; cytochrome c oxidase subunit I type 23471 5320658 Smed_6355 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit I type YP_001314880.1 21564 D 366394 CDS YP_001314881.1 150378287 5320659 23472..24068 1 NC_009622.1 KEGG: ret:RHE_PB00063 putative cytochrome c oxidase subunit III protein; putative cytochrome c oxidase subunit III protein 24068 5320659 Smed_6356 Sinorhizobium medicae WSM419 putative cytochrome c oxidase subunit III protein YP_001314881.1 23472 D 366394 CDS YP_001314882.1 150378288 5320660 24065..24415 1 NC_009622.1 KEGG: sus:Acid_6906 hypothetical protein; hypothetical protein 24415 5320660 Smed_6357 Sinorhizobium medicae WSM419 hypothetical protein YP_001314882.1 24065 D 366394 CDS YP_001314883.1 150378289 5320661 24412..25398 1 NC_009622.1 KEGG: sus:Acid_6905 hypothetical protein; hypothetical protein 25398 5320661 Smed_6358 Sinorhizobium medicae WSM419 hypothetical protein YP_001314883.1 24412 D 366394 CDS YP_001314884.1 150378290 5320664 complement(27391..27522) 1 NC_009622.1 KEGG: sme:SMb21396 hypothetical protein; hypothetical protein 27522 5320664 Smed_6361 Sinorhizobium medicae WSM419 hypothetical protein YP_001314884.1 27391 R 366394 CDS YP_001314885.1 150378291 5320665 27690..28001 1 NC_009622.1 hypothetical protein 28001 5320665 Smed_6362 Sinorhizobium medicae WSM419 hypothetical protein YP_001314885.1 27690 D 366394 CDS YP_001314886.1 150378292 5320666 complement(28025..28588) 1 NC_009622.1 TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein; yecA family protein 28588 5320666 Smed_6363 Sinorhizobium medicae WSM419 yecA family protein YP_001314886.1 28025 R 366394 CDS YP_001314887.1 150378293 5320667 complement(28585..30159) 1 NC_009622.1 PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative; transposase IS66 30159 5320667 Smed_6364 Sinorhizobium medicae WSM419 transposase IS66 YP_001314887.1 28585 R 366394 CDS YP_001314888.1 150378294 5320668 complement(30208..30564) 1 NC_009622.1 PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28; IS66 Orf2 family protein 30564 5320668 Smed_6365 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314888.1 30208 R 366394 CDS YP_001314889.1 150378295 5320669 complement(30561..31043) 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28; transposase IS3/IS911 family protein 31043 5320669 Smed_6366 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314889.1 30561 R 366394 CDS YP_001314890.1 150378296 5320672 32353..33642 1 NC_009622.1 PFAM: polysaccharide biosynthesis protein; KEGG: sme:SMb21244 putative membrane protein, similar to putative polysaccharide transporter; polysaccharide biosynthesis protein 33642 5320672 Smed_6369 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001314890.1 32353 D 366394 CDS YP_001314891.1 150378297 5320673 complement(33890..35791) 1 NC_009622.1 PFAM: K potassium transporter; KEGG: sme:SMa1798 Kup2 potassium uptake protein; K potassium transporter 35791 5320673 Smed_6370 Sinorhizobium medicae WSM419 K potassium transporter YP_001314891.1 33890 R 366394 CDS YP_001314892.1 150378298 5320674 complement(36540..36953) 1 NC_009622.1 PFAM: ROSMUCR transcriptional regulator; KEGG: sme:SMa0748 putative MucR family transcriptional regulatory protein; MucR family transcriptional regulator 36953 5320674 Smed_6371 Sinorhizobium medicae WSM419 MucR family transcriptional regulator YP_001314892.1 36540 R 366394 CDS YP_001314893.1 150378299 5320677 38838..39398 1 NC_009622.1 KEGG: sme:SMa1697 hypothetical protein; hypothetical protein 39398 5320677 Smed_6374 Sinorhizobium medicae WSM419 hypothetical protein YP_001314893.1 38838 D 366394 CDS YP_001314894.1 150378300 5320678 complement(39464..39784) 1 NC_009622.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMb20935 putative transcriptional regulator protein; XRE family transcriptional regulator 39784 5320678 Smed_6375 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314894.1 39464 R 366394 CDS YP_001314895.1 150378301 5320679 40123..40425 1 NC_009622.1 hypothetical protein 40425 5320679 Smed_6376 Sinorhizobium medicae WSM419 hypothetical protein YP_001314895.1 40123 D 366394 CDS YP_001314896.1 150378302 5320681 complement(41074..41571) 1 NC_009622.1 PFAM: helix-turn-helix domain protein; KEGG: mes:Meso_4238 transcriptional regulator, XRE family; XRE family transcriptional regulator 41571 5320681 Smed_6378 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001314896.1 41074 R 366394 CDS YP_001314897.1 150378303 5320682 complement(42192..42638) 1 NC_009622.1 KEGG: mes:Meso_4163 hypothetical protein; hypothetical protein 42638 5320682 Smed_6379 Sinorhizobium medicae WSM419 hypothetical protein YP_001314897.1 42192 R 366394 CDS YP_001314898.1 150378304 5320683 complement(42622..43335) 1 NC_009622.1 KEGG: mes:Meso_4164 hypothetical protein; hypothetical protein 43335 5320683 Smed_6380 Sinorhizobium medicae WSM419 hypothetical protein YP_001314898.1 42622 R 366394 CDS YP_001314899.1 150378305 5320684 44025..44426 1 NC_009622.1 PFAM: mobilisation protein; KEGG: mes:Meso_4165 hypothetical protein; mobilisation protein 44426 5320684 Smed_6381 Sinorhizobium medicae WSM419 mobilisation protein YP_001314899.1 44025 D 366394 CDS YP_001314900.1 150378306 5320685 44430..46922 1 NC_009622.1 KEGG: mes:Meso_4166 hypothetical protein; hypothetical protein 46922 5320685 Smed_6382 Sinorhizobium medicae WSM419 hypothetical protein YP_001314900.1 44430 D 366394 CDS YP_001314901.1 150378307 5320686 46929..47138 1 NC_009622.1 hypothetical protein 47138 5320686 Smed_6383 Sinorhizobium medicae WSM419 hypothetical protein YP_001314901.1 46929 D 366394 CDS YP_001314902.1 150378308 5320687 47238..47681 1 NC_009622.1 PFAM: protein of unknown function DUF1486; KEGG: gvi:glr0227 hypothetical protein; hypothetical protein 47681 5320687 Smed_6384 Sinorhizobium medicae WSM419 hypothetical protein YP_001314902.1 47238 D 366394 CDS YP_001314903.1 150378309 5320689 48721..49623 1 NC_009622.1 PFAM: beta-lactamase domain protein; KEGG: mes:Meso_3529 beta-lactamase-like; beta-lactamase domain-containing protein 49623 5320689 Smed_6386 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001314903.1 48721 D 366394 CDS YP_001314904.1 150378310 5320693 51262..52086 1 NC_009622.1 PFAM: manganese containing catalase; KEGG: rba:RB10727 manganese-containing catalase; catalase 52086 5320693 Smed_6390 Sinorhizobium medicae WSM419 catalase YP_001314904.1 51262 D 366394 CDS YP_001314905.1 150378311 5320695 52465..53127 1 NC_009622.1 KEGG: ret:RHE_PF00060 hypothetical protein; hypothetical protein 53127 5320695 Smed_6392 Sinorhizobium medicae WSM419 hypothetical protein YP_001314905.1 52465 D 366394 CDS YP_001314906.1 150378312 5320696 53195..53803 1 NC_009622.1 hypothetical protein 53803 5320696 Smed_6393 Sinorhizobium medicae WSM419 hypothetical protein YP_001314906.1 53195 D 366394 CDS YP_001314907.1 150378313 5320697 complement(53870..55345) 1 NC_009622.1 PFAM: protein of unknown function DUF1214; KEGG: mkm:Mkms_3213 protein of unknown function DUF1214; hypothetical protein 55345 5320697 Smed_6394 Sinorhizobium medicae WSM419 hypothetical protein YP_001314907.1 53870 R 366394 CDS YP_001314908.1 150378314 5320699 complement(56661..58760) 1 NC_009622.1 PFAM: TRAG family protein; KEGG: mes:Meso_4169 TraG protein; TRAG family protein 58760 5320699 Smed_6396 Sinorhizobium medicae WSM419 TRAG family protein YP_001314908.1 56661 R 366394 CDS YP_001314909.1 150378315 5320700 complement(58757..59785) 1 NC_009622.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: mes:Meso_4170 type II secretion system protein E; P-type DNA transfer ATPase VirB11 59785 5320700 Smed_6397 Sinorhizobium medicae WSM419 P-type DNA transfer ATPase VirB11 YP_001314909.1 58757 R 366394 CDS YP_001314910.1 150378316 5320701 complement(59766..60977) 1 NC_009622.1 PFAM: conjugation TrbI family protein; KEGG: mes:Meso_4171 conjugation TrbI-like protein; conjugation TrbI family protein 60977 5320701 Smed_6398 Sinorhizobium medicae WSM419 conjugation TrbI family protein YP_001314910.1 59766 R 366394 CDS YP_001314911.1 150378317 5320702 complement(60977..61786) 1 NC_009622.1 TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mes:Meso_4172 conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein VirB9 61786 5320702 Smed_6399 Sinorhizobium medicae WSM419 P-type conjugative transfer protein VirB9 YP_001314911.1 60977 R 366394 CDS YP_001314912.1 150378318 5320703 complement(61783..62478) 1 NC_009622.1 PFAM: VirB8 family protein; KEGG: mes:Meso_4173 VirB8; VirB8 family protein 62478 5320703 Smed_6400 Sinorhizobium medicae WSM419 VirB8 family protein YP_001314912.1 61783 R 366394 CDS YP_001314913.1 150378319 5320704 complement(62504..63532) 1 NC_009622.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: mes:Meso_4174 TrbL/VirB6 plasmid conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein 63532 5320704 Smed_6401 Sinorhizobium medicae WSM419 TrbL/VirB6 plasmid conjugal transfer protein YP_001314913.1 62504 R 366394 CDS YP_001314914.1 150378320 5320705 complement(63548..63775) 1 NC_009622.1 hypothetical protein 63775 5320705 Smed_6402 Sinorhizobium medicae WSM419 hypothetical protein YP_001314914.1 63548 R 366394 CDS YP_001314915.1 150378321 5320706 complement(63765..64466) 1 NC_009622.1 KEGG: mes:Meso_4175 conjugal transfer protein; conjugal transfer protein 64466 5320706 Smed_6403 Sinorhizobium medicae WSM419 conjugal transfer protein YP_001314915.1 63765 R 366394 CDS YP_001314916.1 150378322 5320707 complement(64478..65566) 1 NC_009622.1 PFAM: Lytic transglycosylase catalytic; KEGG: mes:Meso_4176 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 65566 5320707 Smed_6404 Sinorhizobium medicae WSM419 lytic transglycosylase catalytic YP_001314916.1 64478 R 366394 CDS YP_001314917.1 150378323 5320708 complement(65563..68022) 1 NC_009622.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: mes:Meso_4177 type IV secretion/conjugal transfer ATPase, VirB4 family; type IV secretion/conjugal transfer ATPase 68022 5320708 Smed_6405 Sinorhizobium medicae WSM419 type IV secretion/conjugal transfer ATPase YP_001314917.1 65563 R 366394 CDS YP_001314918.1 150378324 5320709 complement(68025..68324) 1 NC_009622.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: mes:Meso_4178 type IV secretory pathway, VirB3-like; type IV secretory pathway VirB3 family protein 68324 5320709 Smed_6406 Sinorhizobium medicae WSM419 type IV secretory pathway VirB3 family protein YP_001314918.1 68025 R 366394 CDS YP_001314919.1 150378325 5320710 complement(68328..68666) 1 NC_009622.1 PFAM: VIRB2 type IV secretion fmaily protein; KEGG: mes:Meso_4179 VirB2 type IV secretion; VIRB2 type IV secretion fmaily protein 68666 5320710 Smed_6407 Sinorhizobium medicae WSM419 VIRB2 type IV secretion fmaily protein YP_001314919.1 68328 R 366394 CDS YP_001314920.1 150378326 5320711 complement(68678..69439) 1 NC_009622.1 PFAM: Lytic transglycosylase catalytic; KEGG: mes:Meso_4180 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 69439 5320711 Smed_6408 Sinorhizobium medicae WSM419 lytic transglycosylase catalytic YP_001314920.1 68678 R 366394 CDS YP_001314921.1 150378327 5320712 69812..70420 1 NC_009622.1 KEGG: mes:Meso_4181 hypothetical protein; hypothetical protein 70420 5320712 Smed_6409 Sinorhizobium medicae WSM419 hypothetical protein YP_001314921.1 69812 D 366394 CDS YP_001314922.1 150378328 5320713 70417..70953 1 NC_009622.1 KEGG: mes:Meso_4182 succinoglycan biosynthesis protein ExoI-like; succinoglycan biosynthesis protein ExoI-like protein 70953 5320713 Smed_6410 Sinorhizobium medicae WSM419 succinoglycan biosynthesis protein ExoI-like protein YP_001314922.1 70417 D 366394 CDS YP_001314923.1 150378329 5320714 70950..71651 1 NC_009622.1 PFAM: nuclease (SNase domain protein); KEGG: mes:Meso_4183 nuclease (SNase-like); nuclease 71651 5320714 Smed_6411 Sinorhizobium medicae WSM419 nuclease YP_001314923.1 70950 D 366394 CDS YP_001314924.1 150378330 5320715 71652..72050 1 NC_009622.1 hypothetical protein 72050 5320715 Smed_6412 Sinorhizobium medicae WSM419 hypothetical protein YP_001314924.1 71652 D 366394 CDS YP_001314925.1 150378331 5320716 72052..72648 1 NC_009622.1 KEGG: mes:Meso_4184 hypothetical protein; hypothetical protein 72648 5320716 Smed_6413 Sinorhizobium medicae WSM419 hypothetical protein YP_001314925.1 72052 D 366394 CDS YP_001314926.1 150378332 5320717 72669..73085 1 NC_009622.1 hypothetical protein 73085 5320717 Smed_6414 Sinorhizobium medicae WSM419 hypothetical protein YP_001314926.1 72669 D 366394 CDS YP_001314927.1 150378333 5320718 complement(73168..73515) 1 NC_009622.1 hypothetical protein 73515 5320718 Smed_6415 Sinorhizobium medicae WSM419 hypothetical protein YP_001314927.1 73168 R 366394 CDS YP_001314928.1 150378334 5320719 complement(73981..74157) 1 NC_009622.1 hypothetical protein 74157 5320719 Smed_6416 Sinorhizobium medicae WSM419 hypothetical protein YP_001314928.1 73981 R 366394 CDS YP_001314929.1 150378335 5320720 complement(74230..75240) 1 NC_009622.1 KEGG: rle:pRL80128 hypothetical protein; hypothetical protein 75240 5320720 Smed_6417 Sinorhizobium medicae WSM419 hypothetical protein YP_001314929.1 74230 R 366394 CDS YP_001314930.1 150378336 5320721 complement(75230..76843) 1 NC_009622.1 KEGG: rle:pRL80130 putative transmembrane protein; putative transmembrane protein 76843 5320721 Smed_6418 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001314930.1 75230 R 366394 CDS YP_001314931.1 150378337 5320722 77053..77409 1 NC_009622.1 hypothetical protein 77409 5320722 Smed_6419 Sinorhizobium medicae WSM419 hypothetical protein YP_001314931.1 77053 D 366394 CDS YP_001314932.1 150378338 5320723 complement(77571..78572) 1 NC_009622.1 PFAM: Integrase catalytic region; KEGG: sme:SMa2047 TRm24 putative transposase; integrase catalytic region 78572 5320723 Smed_6420 Sinorhizobium medicae WSM419 integrase catalytic region YP_001314932.1 77571 R 366394 CDS YP_001314933.1 150378339 5320724 78912..79649 1 NC_009622.1 KEGG: sme:SMc01196 hypothetical protein; hypothetical protein 79649 5320724 Smed_6421 Sinorhizobium medicae WSM419 hypothetical protein YP_001314933.1 78912 D 366394 CDS YP_001314934.1 150378340 5320725 complement(79636..81045) 1 NC_009622.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00137 putative insertion sequence transposase protein; integrase catalytic region 81045 5320725 Smed_6422 Sinorhizobium medicae WSM419 integrase catalytic region YP_001314934.1 79636 R 366394 CDS YP_001314935.1 150378341 5320730 complement(83128..83421) 1 NC_009622.1 hypothetical protein 83421 5320730 Smed_6427 Sinorhizobium medicae WSM419 hypothetical protein YP_001314935.1 83128 R 366394 CDS YP_001314936.1 150378342 5320731 complement(83690..84022) 1 NC_009622.1 hypothetical protein 84022 5320731 Smed_6428 Sinorhizobium medicae WSM419 hypothetical protein YP_001314936.1 83690 R 366394 CDS YP_001314937.1 150378343 5320732 complement(84145..85755) 1 NC_009622.1 PFAM: tyrosinase; KEGG: nmu:Nmul_A0920 tyrosinase; monophenol monooxygenase 85755 5320732 Smed_6429 Sinorhizobium medicae WSM419 monophenol monooxygenase YP_001314937.1 84145 R 366394 CDS YP_001314938.1 150378344 5320733 complement(85819..86211) 1 NC_009622.1 KEGG: bur:Bcep18194_C6987 hypothetical protein; hypothetical protein 86211 5320733 Smed_6430 Sinorhizobium medicae WSM419 hypothetical protein YP_001314938.1 85819 R 366394 CDS YP_001314939.1 150378345 5320734 complement(86239..88188) 1 NC_009622.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: hch:HCH_03584 putative multicopper oxidases; multicopper oxidase type 2 88188 5320734 Smed_6431 Sinorhizobium medicae WSM419 multicopper oxidase type 2 YP_001314939.1 86239 R 366394 CDS YP_001314940.1 150378346 5320741 91437..92630 1 NC_009622.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein; polar amino acid ABC transporter, inner membrane subunit 92630 5320741 Smed_6438 Sinorhizobium medicae WSM419 polar amino acid ABC transporter, inner membrane subunit YP_001314940.1 91437 D 366394 CDS YP_001314941.1 150378347 5320742 92635..93789 1 NC_009622.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02120 probable general L-amino acid transport permease ABC transporter protein; polar amino acid ABC transporter, inner membrane subunit 93789 5320742 Smed_6439 Sinorhizobium medicae WSM419 polar amino acid ABC transporter, inner membrane subunit YP_001314941.1 92635 D 366394 CDS YP_001314942.1 150378348 5320743 93806..94582 1 NC_009622.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02121 probable general L-amino acid transport ATP-binding ABC transporter protein; ABC transporter related 94582 5320743 Smed_6440 Sinorhizobium medicae WSM419 ABC transporter related YP_001314942.1 93806 D 366394 CDS YP_001314943.1 150378349 5320745 complement(94969..95139) 1 NC_009622.1 hypothetical protein 95139 5320745 Smed_6442 Sinorhizobium medicae WSM419 hypothetical protein YP_001314943.1 94969 R 366394 CDS YP_001314944.1 150378350 5320748 95960..96244 1 NC_009622.1 hypothetical protein 96244 5320748 Smed_6445 Sinorhizobium medicae WSM419 hypothetical protein YP_001314944.1 95960 D 366394 CDS YP_001314945.1 150378351 5320749 96364..96504 1 NC_009622.1 KEGG: sme:SMc02709 hypothetical/unknown protein; hypothetical protein 96504 5320749 Smed_6446 Sinorhizobium medicae WSM419 hypothetical protein YP_001314945.1 96364 D 366394 CDS YP_001314946.1 150378352 5320750 96912..98021 1 NC_009622.1 TIGRFAM: calcium/proton exchanger; PFAM: sodium/calcium exchanger membrane region; KEGG: bxe:Bxe_B1680 Ca2+/H+ antiporter, CaCA family; calcium/proton exchanger 98021 5320750 Smed_6447 Sinorhizobium medicae WSM419 calcium/proton exchanger YP_001314946.1 96912 D 366394 CDS YP_001314947.1 150378353 5320751 complement(98085..98309) 1 NC_009622.1 hypothetical protein 98309 5320751 Smed_6448 Sinorhizobium medicae WSM419 hypothetical protein YP_001314947.1 98085 R 366394 CDS YP_001314948.1 150378354 5320752 complement(98378..98638) 1 NC_009622.1 PFAM: plasmid stabilization system; KEGG: rle:pRL120676 hypothetical protein; plasmid stabilization system protein 98638 5320752 Smed_6449 Sinorhizobium medicae WSM419 plasmid stabilization system protein YP_001314948.1 98378 R 366394 CDS YP_001314949.1 150378355 5320753 complement(98635..98916) 1 NC_009622.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: rle:pRL120675 hypothetical protein; CopG family transcriptional regulator 98916 5320753 Smed_6450 Sinorhizobium medicae WSM419 CopG family transcriptional regulator YP_001314949.1 98635 R 366394 CDS YP_001314950.1 150378356 5320754 complement(join(99230..99721,99721..100050)) 1 NC_009622.1 KEGG: gox:GOX2729 transposase; hypothetical protein 100050 5320754 Smed_6451 Sinorhizobium medicae WSM419 hypothetical protein YP_001314950.1 99230 R 366394 CDS YP_001314951.1 150378357 5320755 100152..101174 1 NC_009622.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: IS1111A/IS1328/IS1533 family transposase; K07486 transposase; transposase IS116/IS110/IS902 family protein 101174 5320755 Smed_6452 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001314951.1 100152 D 366394 CDS YP_001314952.1 150378358 5320756 101590..102612 1 NC_009622.1 KEGG: nha:Nham_4600 feruloyl esterase; feruloyl esterase 102612 5320756 Smed_6453 Sinorhizobium medicae WSM419 feruloyl esterase YP_001314952.1 101590 D 366394 CDS YP_001314953.1 150378359 5320759 complement(103878..104897) 1 NC_009622.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 104897 5320759 Smed_6456 Sinorhizobium medicae WSM419 1-aminocyclopropane-1-carboxylate deaminase YP_001314953.1 103878 R 366394 CDS YP_001314954.1 150378360 5320760 105041..105517 1 NC_009622.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bja:bll0240 transcriptional regulatory protein; AsnC family transcriptional regulator 105517 5320760 Smed_6457 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001314954.1 105041 D 366394 CDS YP_001314955.1 150378361 5320763 106307..106837 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03301 putative transposase number 1 for insertion sequence ISRM26; transposase IS3/IS911 family protein 106837 5320763 Smed_6460 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314955.1 106307 D 366394 CDS YP_001314956.1 150378362 5320764 106898..108136 1 NC_009622.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sus:Acid_7643 phage integrase family protein; phage integrase family protein 108136 5320764 Smed_6461 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314956.1 106898 D 366394 CDS YP_001314957.1 150378363 5320765 108133..109065 1 NC_009622.1 PFAM: phage integrase family protein; KEGG: mlo:mll6043 integrase/recombinase; phage integrase family protein 109065 5320765 Smed_6462 Sinorhizobium medicae WSM419 phage integrase family protein YP_001314957.1 108133 D 366394 CDS YP_001314958.1 150378364 5320767 complement(110521..111258) 1 NC_009622.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase; KEGG: sme:SMa0776 TRm23b IS ATP-binding protein; IstB ATP binding domain-containing protein 111258 5320767 Smed_6464 Sinorhizobium medicae WSM419 IstB ATP binding domain-containing protein YP_001314958.1 110521 R 366394 CDS YP_001314959.1 150378365 5320770 complement(113402..114145) 1 NC_009622.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bja:bll2236 putative 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 114145 5320770 Smed_6467 Sinorhizobium medicae WSM419 4'-phosphopantetheinyl transferase YP_001314959.1 113402 R 366394 CDS YP_001314960.1 150378366 5320771 complement(114142..114942) 1 NC_009622.1 KEGG: mlo:mlr4158 hypothetical protein; hypothetical protein 114942 5320771 Smed_6468 Sinorhizobium medicae WSM419 hypothetical protein YP_001314960.1 114142 R 366394 CDS YP_001314961.1 150378367 5320772 complement(115207..115956) 1 NC_009622.1 KEGG: plu:plu4884 hypothetical protein; hypothetical protein 115956 5320772 Smed_6469 Sinorhizobium medicae WSM419 hypothetical protein YP_001314961.1 115207 R 366394 CDS YP_001314962.1 150378368 5320774 complement(116722..118257) 1 NC_009622.1 KEGG: rpb:RPB_4281 hypothetical protein; hypothetical protein 118257 5320774 Smed_6471 Sinorhizobium medicae WSM419 hypothetical protein YP_001314962.1 116722 R 366394 CDS YP_001314963.1 150378369 5320775 complement(118254..144998) 1 NC_009622.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: plu:plu2670 hypothetical protein; amino acid adenylation domain-containing protein 144998 5320775 Smed_6472 Sinorhizobium medicae WSM419 amino acid adenylation domain-containing protein YP_001314963.1 118254 R 366394 CDS YP_001314964.1 150378370 5320776 complement(144995..171742) 1 NC_009622.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: psb:Psyr_2616 amino acid adenylation; amino acid adenylation domain-containing protein 171742 5320776 Smed_6473 Sinorhizobium medicae WSM419 amino acid adenylation domain-containing protein YP_001314964.1 144995 R 366394 CDS YP_001314965.1 150378371 5320777 complement(171769..171924) 1 NC_009622.1 hypothetical protein 171924 5320777 Smed_6474 Sinorhizobium medicae WSM419 hypothetical protein YP_001314965.1 171769 R 366394 CDS YP_001314966.1 150378372 5320778 172148..173047 1 NC_009622.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_PE00064 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 173047 5320778 Smed_6475 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001314966.1 172148 D 366394 CDS YP_001314967.1 150378373 5320779 complement(173585..173983) 1 NC_009622.1 KEGG: mlo:mlr6364 cytochrome P-450; cytochrome P-450 173983 5320779 Smed_6476 Sinorhizobium medicae WSM419 cytochrome P-450 YP_001314967.1 173585 R 366394 CDS YP_001314968.1 150378374 5320780 174125..175213 1 NC_009622.1 KEGG: nha:Nham_4600 feruloyl esterase; feruloyl esterase 175213 5320780 Smed_6477 Sinorhizobium medicae WSM419 feruloyl esterase YP_001314968.1 174125 D 366394 CDS YP_001314969.1 150378375 5320781 complement(join(175249..175689,175689..176012)) 1 NC_009622.1 KEGG: bms:BR0533 ISBm1, transposase orfA; transposase 176012 5320781 Smed_6478 Sinorhizobium medicae WSM419 transposase YP_001314969.1 175249 R 366394 CDS YP_001314970.1 150378376 5320783 176652..176987 1 NC_009622.1 hypothetical protein 176987 5320783 Smed_6480 Sinorhizobium medicae WSM419 hypothetical protein YP_001314970.1 176652 D 366394 CDS YP_001314971.1 150378377 5320785 177515..177781 1 NC_009622.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: mlo:mlr9262 hypothetical protein; CopG/Arc/MetJ family transcriptional regulator 177781 5320785 Smed_6482 Sinorhizobium medicae WSM419 CopG/Arc/MetJ family transcriptional regulator YP_001314971.1 177515 D 366394 CDS YP_001314972.1 150378378 5320786 177778..178074 1 NC_009622.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: mlo:msr9263 hypothetical protein; addiction module antitoxin 178074 5320786 Smed_6483 Sinorhizobium medicae WSM419 addiction module antitoxin YP_001314972.1 177778 D 366394 CDS YP_001314973.1 150378379 5320788 complement(178647..178952) 1 NC_009622.1 KEGG: ret:RHE_PA00097 hypothetical protein; hypothetical protein 178952 5320788 Smed_6485 Sinorhizobium medicae WSM419 hypothetical protein YP_001314973.1 178647 R 366394 CDS YP_001314974.1 150378380 5320789 complement(178952..180520) 1 NC_009622.1 PFAM: transposase IS66; KEGG: ret:RHE_PA00098 probable insertion sequence transposase protein, IS66 family; transposase IS66 180520 5320789 Smed_6486 Sinorhizobium medicae WSM419 transposase IS66 YP_001314974.1 178952 R 366394 CDS YP_001314975.1 150378381 5320790 complement(180587..180934) 1 NC_009622.1 PFAM: IS66 Orf2 family protein; KEGG: ret:RHE_PA00099 putative insertion sequence transposase protein; IS66 Orf2 family protein 180934 5320790 Smed_6487 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314975.1 180587 R 366394 CDS YP_001314976.1 150378382 5320791 complement(180931..181314) 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL70041 putative insertion sequence protein; transposase IS3/IS911 family protein 181314 5320791 Smed_6488 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314976.1 180931 R 366394 CDS YP_001314977.1 150378383 5320792 complement(181476..181835) 1 NC_009622.1 PFAM: autoinducer synthesis protein; KEGG: atc:AGR_pTi_91 autoinducer synthesis protein TraI; autoinducer synthesis protein 181835 5320792 Smed_6489 Sinorhizobium medicae WSM419 autoinducer synthesis protein YP_001314977.1 181476 R 366394 CDS YP_001314978.1 150378384 5320793 182259..183473 1 NC_009622.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rle:pRL70001 putative replication protein A; cobyrinic acid ac-diamide synthase 183473 5320793 Smed_6490 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001314978.1 182259 D 366394 CDS YP_001314979.1 150378385 5320794 183470..184492 1 NC_009622.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: rle:pRL70002 putative replication protein B; parB-like partition protein 184492 5320794 Smed_6491 Sinorhizobium medicae WSM419 parB-like partition protein YP_001314979.1 183470 D 366394 CDS YP_001314980.1 150378386 5320795 184647..185861 1 NC_009622.1 PFAM: replication protein C; KEGG: rle:pRL70003 putative replication protein; replication initiation protein RepC 185861 5320795 Smed_6492 Sinorhizobium medicae WSM419 replication initiation protein RepC YP_001314980.1 184647 D 366394 CDS YP_001314981.1 150378387 5320797 complement(187369..187671) 1 NC_009622.1 KEGG: eli:ELI_14595 hypothetical protein; hypothetical protein 187671 5320797 Smed_6494 Sinorhizobium medicae WSM419 hypothetical protein YP_001314981.1 187369 R 366394 CDS YP_001314982.1 150378388 5320798 187786..188049 1 NC_009622.1 KEGG: sme:SMa2259 hypothetical protein; hypothetical protein 188049 5320798 Smed_6495 Sinorhizobium medicae WSM419 hypothetical protein YP_001314982.1 187786 D 366394 CDS YP_001314983.1 150378389 5320800 189070..189288 1 NC_009622.1 hypothetical protein 189288 5320800 Smed_6497 Sinorhizobium medicae WSM419 hypothetical protein YP_001314983.1 189070 D 366394 CDS YP_001314984.1 150378390 5320801 189285..189563 1 NC_009622.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: nha:Nham_4513 prevent-host-death protein; prevent-host-death family protein 189563 5320801 Smed_6498 Sinorhizobium medicae WSM419 prevent-host-death family protein YP_001314984.1 189285 D 366394 CDS YP_001314985.1 150378391 5320803 complement(189762..190181) 1 NC_009622.1 PFAM: PilT protein domain protein; KEGG: mpt:Mpe_A3783 hypothetical protein; PilT domain-containing protein 190181 5320803 Smed_6500 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001314985.1 189762 R 366394 CDS YP_001314986.1 150378392 5320805 191590..192570 1 NC_009622.1 PFAM: restriction endonuclease; KEGG: son:SO0304 hypothetical endonuclease; restriction endonuclease 192570 5320805 Smed_6502 Sinorhizobium medicae WSM419 restriction endonuclease YP_001314986.1 191590 D 366394 CDS YP_001314987.1 150378393 5320806 193025..194950 1 NC_009622.1 SMART: TIR protein; KEGG: hne:HNE_0284 hypothetical protein; TIR protein 194950 5320806 Smed_6503 Sinorhizobium medicae WSM419 TIR protein YP_001314987.1 193025 D 366394 CDS YP_001314988.1 150378394 5320807 194947..196500 1 NC_009622.1 KEGG: rpd:RPD_3631 conserved hypothetical protein, interruption-N; hypothetical protein 196500 5320807 Smed_6504 Sinorhizobium medicae WSM419 hypothetical protein YP_001314988.1 194947 D 366394 CDS YP_001314989.1 150378395 5320808 complement(196491..196787) 1 NC_009622.1 hypothetical protein 196787 5320808 Smed_6505 Sinorhizobium medicae WSM419 hypothetical protein YP_001314989.1 196491 R 366394 CDS YP_001314990.1 150378396 5320809 complement(196795..197724) 1 NC_009622.1 PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein; integrase catalytic region 197724 5320809 Smed_6506 Sinorhizobium medicae WSM419 integrase catalytic region YP_001314990.1 196795 R 366394 CDS YP_001314991.1 150378397 5320810 complement(197718..197984) 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein; transposase IS3/IS911 family protein 197984 5320810 Smed_6507 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314991.1 197718 R 366394 CDS YP_001314992.1 150378398 5320811 198161..201754 1 NC_009622.1 KEGG: vei:Veis_3661 hypothetical protein; hypothetical protein 201754 5320811 Smed_6508 Sinorhizobium medicae WSM419 hypothetical protein YP_001314992.1 198161 D 366394 CDS YP_001314993.1 150378399 5320812 complement(201862..202500) 1 NC_009622.1 hypothetical protein 202500 5320812 Smed_6509 Sinorhizobium medicae WSM419 hypothetical protein YP_001314993.1 201862 R 366394 CDS YP_001314994.1 150378400 5320814 203023..203406 1 NC_009622.1 PFAM: transposase IS3/IS911 family protein; KEGG: rle:pRL70041 putative insertion sequence protein; transposase IS3/IS911 family protein 203406 5320814 Smed_6511 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001314994.1 203023 D 366394 CDS YP_001314995.1 150378401 5320815 203403..203750 1 NC_009622.1 PFAM: IS66 Orf2 family protein; KEGG: ret:RHE_PA00099 putative insertion sequence transposase protein; IS66 Orf2 family protein 203750 5320815 Smed_6512 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001314995.1 203403 D 366394 CDS YP_001314996.1 150378402 5320816 203821..205386 1 NC_009622.1 PFAM: transposase IS66; KEGG: ret:RHE_PA00098 probable insertion sequence transposase protein, IS66 family; transposase IS66 205386 5320816 Smed_6513 Sinorhizobium medicae WSM419 transposase IS66 YP_001314996.1 203821 D 366394 CDS YP_001314997.1 150378403 5320817 205386..205691 1 NC_009622.1 KEGG: ret:RHE_PA00097 hypothetical protein; hypothetical protein 205691 5320817 Smed_6514 Sinorhizobium medicae WSM419 hypothetical protein YP_001314997.1 205386 D 366394 CDS YP_001314998.1 150378404 5320818 205785..206840 1 NC_009622.1 KEGG: atc:AGR_L_551 hypothetical protein; hypothetical protein 206840 5320818 Smed_6515 Sinorhizobium medicae WSM419 hypothetical protein YP_001314998.1 205785 D 366394 CDS YP_001314999.1 150378405 5320821 complement(207573..208307) 1 NC_009622.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: nha:Nham_3924 IstB-like ATP-binding protein; IstB ATP binding domain-containing protein 208307 5320821 Smed_6518 Sinorhizobium medicae WSM419 IstB ATP binding domain-containing protein YP_001314999.1 207573 R 366394 CDS YP_001315000.1 150378406 5320822 complement(208309..209808) 1 NC_009622.1 PFAM: Integrase catalytic region; KEGG: nha:Nham_3923 integrase, catalytic region; integrase catalytic region 209808 5320822 Smed_6519 Sinorhizobium medicae WSM419 integrase catalytic region YP_001315000.1 208309 R 366394 CDS YP_001315001.1 150378407 5320823 complement(209954..211174) 1 NC_009622.1 PFAM: purine or other phosphorylase family 1; response regulator receiver; KEGG: bch:Bcen2424_3737 response regulator receiver protein; response regulator receiver protein 211174 5320823 Smed_6520 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001315001.1 209954 R 366394 CDS YP_001315002.1 150378408 5320824 complement(211179..211634) 1 NC_009622.1 PFAM: response regulator receiver; KEGG: nmu:Nmul_A0543 response regulator receiver domain protein (CheY-like); response regulator receiver protein 211634 5320824 Smed_6521 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001315002.1 211179 R 366394 CDS YP_001315003.1 150378409 5320825 complement(211609..215082) 1 NC_009622.1 KEGG: bch:Bcen2424_3739 hypothetical protein; hypothetical protein 215082 5320825 Smed_6522 Sinorhizobium medicae WSM419 hypothetical protein YP_001315003.1 211609 R 366394 CDS YP_001315004.1 150378410 5320826 215640..216422 1 NC_009622.1 PFAM: glycoside hydrolase family 24; KEGG: bqu:BQ11590 phage related lysozyme; glycoside hydrolase family protein 216422 5320826 Smed_6523 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001315004.1 215640 D 366394 CDS YP_001315005.1 150378411 5320827 216440..217360 1 NC_009622.1 hypothetical protein 217360 5320827 Smed_6524 Sinorhizobium medicae WSM419 hypothetical protein YP_001315005.1 216440 D 366394 CDS YP_001315006.1 150378412 5320828 complement(218038..219165) 1 NC_009622.1 PFAM: glycoside hydrolase family 25; KEGG: mlo:mll7449 similar to autolytic lysozyme; glycoside hydrolase family protein 219165 5320828 Smed_6525 Sinorhizobium medicae WSM419 glycoside hydrolase family protein YP_001315006.1 218038 R 366394 CDS YP_001325696.1 150395229 5324463 135..401 1 NC_009636.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 401 rpsT 5324463 rpsT Sinorhizobium medicae WSM419 30S ribosomal protein S20 YP_001325696.1 135 D 366394 CDS YP_001325697.1 150395230 5320829 1405..2850 1 NC_009636.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 2850 dnaA 5320829 dnaA Sinorhizobium medicae WSM419 chromosomal replication initiation protein YP_001325697.1 1405 D 366394 CDS YP_001325698.1 150395231 5320830 3085..3459 1 NC_009636.1 PFAM: DGPFAETKE family protein; KEGG: sme:SMc01151 conserved hypothetical protein; DGPFAETKE family protein 3459 5320830 Smed_0003 Sinorhizobium medicae WSM419 DGPFAETKE family protein YP_001325698.1 3085 D 366394 CDS YP_001325699.1 150395232 5320831 3456..4739 1 NC_009636.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc01150 putative RNA polymerase sigma-70 factor, ECF subfamily; RNA polymerase ECF-subfamily sigma factor 4739 5320831 Smed_0004 Sinorhizobium medicae WSM419 RNA polymerase ECF-subfamily sigma factor YP_001325699.1 3456 D 366394 CDS YP_001325700.1 150395233 5320832 5026..5508 1 NC_009636.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc01149 hypothetical protein; activator of Hsp90 ATPase 1 family protein 5508 5320832 Smed_0005 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001325700.1 5026 D 366394 CDS YP_001325701.1 150395234 5320833 5532..6398 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01148 PhnB protein; glyoxalase/bleomycin resistance protein/dioxygenase 6398 5320833 Smed_0006 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001325701.1 5532 D 366394 CDS YP_001325702.1 150395235 5320834 complement(6437..7582) 1 NC_009636.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 7582 5320834 Smed_0007 Sinorhizobium medicae WSM419 coproporphyrinogen III oxidase YP_001325702.1 6437 R 366394 CDS YP_001325703.1 150395236 5320835 complement(7630..8274) 1 NC_009636.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 8274 5320835 Smed_0008 Sinorhizobium medicae WSM419 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001325703.1 7630 R 366394 CDS YP_001325704.1 150395237 5320836 complement(8305..8718) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01145 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 8718 5320836 Smed_0009 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001325704.1 8305 R 366394 CDS YP_001325705.1 150395238 5320837 complement(8747..9466) 1 NC_009636.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 9466 rph 5320837 rph Sinorhizobium medicae WSM419 ribonuclease PH YP_001325705.1 8747 R 366394 CDS YP_001325706.1 150395239 5320838 9671..10750 1 NC_009636.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 10750 hrcA 5320838 hrcA Sinorhizobium medicae WSM419 heat-inducible transcription repressor YP_001325706.1 9671 D 366394 CDS YP_001325707.1 150395240 5320839 10909..11535 1 NC_009636.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 11535 5320839 Smed_0012 Sinorhizobium medicae WSM419 heat shock protein GrpE YP_001325707.1 10909 D 366394 CDS YP_001325708.1 150395241 5320840 complement(11674..12138) 1 NC_009636.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sme:SMc01141 probable nitrogen regulatory IIA protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 12138 5320840 Smed_0013 Sinorhizobium medicae WSM419 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001325708.1 11674 R 366394 CDS YP_001325709.1 150395242 5320841 complement(12312..12884) 1 NC_009636.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sme:SMc01140 probable sigma54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA 12884 5320841 Smed_0014 Sinorhizobium medicae WSM419 sigma 54 modulation protein/ribosomal protein S30EA YP_001325709.1 12312 R 366394 CDS YP_001325710.1 150395243 5320842 complement(13139..14680) 1 NC_009636.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 14680 5320842 Smed_0015 Sinorhizobium medicae WSM419 RNA polymerase factor sigma-54 YP_001325710.1 13139 R 366394 CDS YP_001325711.1 150395244 5320843 complement(14869..15681) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01138 probable ABC transporter ATP-binding protein; ABC transporter-like protein 15681 5320843 Smed_0016 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325711.1 14869 R 366394 CDS YP_001325712.1 150395245 5320844 complement(15694..16254) 1 NC_009636.1 PFAM: OstA family protein; KEGG: sme:SMc01137 hypothetical transmembrane protein; OstA family protein 16254 5320844 Smed_0017 Sinorhizobium medicae WSM419 OstA family protein YP_001325712.1 15694 R 366394 CDS YP_001325713.1 150395246 5320845 complement(16286..16954) 1 NC_009636.1 PFAM: protein of unknown function DUF1239; KEGG: sme:SMc01136 hypothetical protein; hypothetical protein 16954 5320845 Smed_0018 Sinorhizobium medicae WSM419 hypothetical protein YP_001325713.1 16286 R 366394 CDS YP_001325714.1 150395247 5320846 17030..17254 1 NC_009636.1 hypothetical protein 17254 5320846 Smed_0019 Sinorhizobium medicae WSM419 hypothetical protein YP_001325714.1 17030 D 366394 CDS YP_001325715.1 150395248 5320847 17332..18291 1 NC_009636.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: sme:SMc01135 putative protease IV transmembrane protein; signal peptide peptidase SppA, 36K type 18291 5320847 Smed_0020 Sinorhizobium medicae WSM419 signal peptide peptidase SppA, 36K type YP_001325715.1 17332 D 366394 CDS YP_001325716.1 150395249 5320848 18394..18705 1 NC_009636.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 18705 ihfB 5320848 ihfB Sinorhizobium medicae WSM419 integration host factor subunit beta YP_001325716.1 18394 D 366394 CDS YP_001325717.1 150395250 5320849 18885..19229 1 NC_009636.1 KEGG: sme:SMc01133 hypothetical protein; hypothetical protein 19229 5320849 Smed_0022 Sinorhizobium medicae WSM419 hypothetical protein YP_001325717.1 18885 D 366394 CDS YP_001325718.1 150395251 5320850 complement(19245..19703) 1 NC_009636.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: sme:SMc01132 hypothetical protein; carbon monoxide dehydrogenase subunit G 19703 5320850 Smed_0023 Sinorhizobium medicae WSM419 carbon monoxide dehydrogenase subunit G YP_001325718.1 19245 R 366394 CDS YP_001325719.1 150395252 5320851 19875..21032 1 NC_009636.1 KEGG: sme:SMc01131 hypothetical protein; hypothetical protein 21032 5320851 Smed_0024 Sinorhizobium medicae WSM419 hypothetical protein YP_001325719.1 19875 D 366394 CDS YP_001325720.1 150395253 5320852 21029..21889 1 NC_009636.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sme:SMc01130 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 21889 5320852 Smed_0025 Sinorhizobium medicae WSM419 tRNA/rRNA methyltransferase SpoU YP_001325720.1 21029 D 366394 CDS YP_001325721.1 150395254 5320853 21889..22386 1 NC_009636.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 22386 5320853 Smed_0026 Sinorhizobium medicae WSM419 lipoprotein signal peptidase YP_001325721.1 21889 D 366394 CDS YP_001325722.1 150395255 5320854 22461..24680 1 NC_009636.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc01128 putative sensor histidine kinase transmembrane protein; integral membrane sensor hybrid histidine kinase 24680 5320854 Smed_0027 Sinorhizobium medicae WSM419 integral membrane sensor hybrid histidine kinase YP_001325722.1 22461 D 366394 CDS YP_001325723.1 150395256 5320855 24797..25687 1 NC_009636.1 KEGG: sme:SMc01127 hypothetical protein; hypothetical protein 25687 5320855 Smed_0028 Sinorhizobium medicae WSM419 hypothetical protein YP_001325723.1 24797 D 366394 CDS YP_001325724.1 150395257 5320856 complement(25946..28231) 1 NC_009636.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 28231 5320856 Smed_0029 Sinorhizobium medicae WSM419 malic enzyme YP_001325724.1 25946 R 366394 CDS YP_001325725.1 150395258 5320857 28334..31081 1 NC_009636.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 31081 5320857 Smed_0030 Sinorhizobium medicae WSM419 DNA mismatch repair protein MutS YP_001325725.1 28334 D 366394 CDS YP_001325726.1 150395259 5320858 31282..34131 1 NC_009636.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 34131 5320858 Smed_0031 Sinorhizobium medicae WSM419 PII uridylyl-transferase YP_001325726.1 31282 D 366394 CDS YP_001325727.1 150395260 5320859 34128..35735 1 NC_009636.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: sme:SMc01123 putative virulence factor MVIN homolog transmembrane protein; integral membrane protein MviN 35735 5320859 Smed_0032 Sinorhizobium medicae WSM419 integral membrane protein MviN YP_001325727.1 34128 D 366394 CDS YP_001325728.1 150395261 5320860 35732..36121 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01122 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 36121 5320860 Smed_0033 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001325728.1 35732 D 366394 CDS YP_001325729.1 150395262 5320861 36212..37276 1 NC_009636.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 37276 5320861 Smed_0034 Sinorhizobium medicae WSM419 tryptophanyl-tRNA synthetase YP_001325729.1 36212 D 366394 CDS YP_001325730.1 150395263 5320862 37329..37820 1 NC_009636.1 PFAM: UspA domain protein; KEGG: sme:SMc01120 hypothetical protein; UspA domain-containing protein 37820 5320862 Smed_0035 Sinorhizobium medicae WSM419 UspA domain-containing protein YP_001325730.1 37329 D 366394 CDS YP_001325731.1 150395264 5320863 38024..38590 1 NC_009636.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: sme:SMc01119 hypothetical protein; scaffold protein Nfu/NifU 38590 5320863 Smed_0036 Sinorhizobium medicae WSM419 scaffold protein Nfu/NifU YP_001325731.1 38024 D 366394 CDS YP_001325732.1 150395265 5320864 38810..39466 1 NC_009636.1 PFAM: peptidase M22 glycoprotease; KEGG: sme:SMc01118 hypothetical protein; peptidase M22 glycoprotease 39466 5320864 Smed_0037 Sinorhizobium medicae WSM419 peptidase M22 glycoprotease YP_001325732.1 38810 D 366394 CDS YP_001325733.1 150395266 5320865 39542..40045 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01117 putative acetyltransferase protein; N-acetyltransferase GCN5 40045 5320865 Smed_0038 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001325733.1 39542 D 366394 CDS YP_001325734.1 150395267 5320866 40085..40954 1 NC_009636.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sme:SMc01116 putative acyltransferase transmembrane protein; phospholipid/glycerol acyltransferase 40954 5320866 Smed_0039 Sinorhizobium medicae WSM419 phospholipid/glycerol acyltransferase YP_001325734.1 40085 D 366394 CDS YP_001325735.1 150395268 5320867 41068..42486 1 NC_009636.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 42486 5320867 Smed_0040 Sinorhizobium medicae WSM419 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001325735.1 41068 D 366394 CDS YP_001325736.1 150395269 5320868 42491..43546 1 NC_009636.1 PFAM: PhoH family protein; KEGG: sme:SMc01114 hypothetical PHOH-like protein; PhoH family protein 43546 5320868 Smed_0041 Sinorhizobium medicae WSM419 PhoH family protein YP_001325736.1 42491 D 366394 CDS YP_001325737.1 150395270 5320869 43610..44116 1 NC_009636.1 PFAM: protein of unknown function UPF0054; KEGG: sme:SMc01113 conserved hypothetical protein; hypothetical protein 44116 5320869 Smed_0042 Sinorhizobium medicae WSM419 hypothetical protein YP_001325737.1 43610 D 366394 CDS YP_001325738.1 150395271 5320870 44129..45304 1 NC_009636.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: sme:SMc01112 hypothetical protein; hypothetical protein 45304 5320870 Smed_0043 Sinorhizobium medicae WSM419 hypothetical protein YP_001325738.1 44129 D 366394 CDS YP_001325739.1 150395272 5320871 45522..47153 1 NC_009636.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 47153 lnt 5320871 lnt Sinorhizobium medicae WSM419 apolipoprotein N-acyltransferase YP_001325739.1 45522 D 366394 CDS YP_001325740.1 150395273 5320872 47291..47710 1 NC_009636.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc01110 DNA-binding protein; XRE family transcriptional regulator 47710 5320872 Smed_0045 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001325740.1 47291 D 366394 CDS YP_001325741.1 150395274 5320873 48104..49384 1 NC_009636.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 49384 5320873 Smed_0046 Sinorhizobium medicae WSM419 S-adenosylmethionine synthetase YP_001325741.1 48104 D 366394 CDS YP_001325742.1 150395275 5320874 49601..50299 1 NC_009636.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 50299 trmB 5320874 trmB Sinorhizobium medicae WSM419 tRNA (guanine-N(7)-)-methyltransferase YP_001325742.1 49601 D 366394 CDS YP_001325743.1 150395276 5320875 complement(50450..50707) 1 NC_009636.1 PFAM: protein of unknown function DUF1150; KEGG: sme:SMc01107 hypothetical protein; hypothetical protein 50707 5320875 Smed_0048 Sinorhizobium medicae WSM419 hypothetical protein YP_001325743.1 50450 R 366394 CDS YP_001325744.1 150395277 5320876 complement(50758..51189) 1 NC_009636.1 PFAM: heat shock protein Hsp20; KEGG: sme:SMc01106 probable small heat shock protein; heat shock protein Hsp20 51189 5320876 Smed_0049 Sinorhizobium medicae WSM419 heat shock protein Hsp20 YP_001325744.1 50758 R 366394 CDS YP_001325745.1 150395278 5320877 51351..52295 1 NC_009636.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sme:SMc01105 putative nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase 52295 5320877 Smed_0050 Sinorhizobium medicae WSM419 inosine/uridine-preferring nucleoside hydrolase YP_001325745.1 51351 D 366394 CDS YP_001325746.1 150395279 5320878 complement(52377..54767) 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sme:SMc01104 probable chemoreceptor (methyl-accepting chemotaxis) transmembrane protein; methyl-accepting chemotaxis sensory transducer 54767 5320878 Smed_0051 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001325746.1 52377 R 366394 CDS YP_001325747.1 150395280 5320879 complement(55019..55939) 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc01103 probable ribokinase protein; ribokinase-like domain-containing protein 55939 5320879 Smed_0052 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001325747.1 55019 R 366394 CDS YP_001325748.1 150395281 5320880 complement(56040..57239) 1 NC_009636.1 PFAM: protein of unknown function DUF195; KEGG: sme:SMc01102 hypothetical protein; hypothetical protein 57239 5320880 Smed_0053 Sinorhizobium medicae WSM419 hypothetical protein YP_001325748.1 56040 R 366394 CDS YP_001325749.1 150395282 5320881 57379..57903 1 NC_009636.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 57903 def 5320881 def Sinorhizobium medicae WSM419 peptide deformylase YP_001325749.1 57379 D 366394 CDS YP_001325750.1 150395283 5320882 57979..58914 1 NC_009636.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 58914 fmt 5320882 fmt Sinorhizobium medicae WSM419 methionyl-tRNA formyltransferase YP_001325750.1 57979 D 366394 CDS YP_001325751.1 150395284 5320883 58914..59657 1 NC_009636.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 59657 truA 5320883 truA Sinorhizobium medicae WSM419 tRNA pseudouridine synthase A YP_001325751.1 58914 D 366394 CDS YP_001325752.1 150395285 5320884 complement(59712..61664) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: sme:SMb20776 putative adenylate cyclase protein; putative Chase2 sensor protein 61664 5320884 Smed_0057 Sinorhizobium medicae WSM419 putative Chase2 sensor protein YP_001325752.1 59712 R 366394 CDS YP_001325753.1 150395286 5320885 complement(61664..65260) 1 NC_009636.1 PFAM: TonB-dependent receptor; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMb20775 hypothetical exported protein, TonB-dependent receptor protein; TonB-dependent receptor 65260 5320885 Smed_0058 Sinorhizobium medicae WSM419 TonB-dependent receptor YP_001325753.1 61664 R 366394 CDS YP_001325754.1 150395287 5320886 65391..65936 1 NC_009636.1 KEGG: sme:SMb20774 hypothetical membrane protein; hypothetical protein 65936 5320886 Smed_0059 Sinorhizobium medicae WSM419 hypothetical protein YP_001325754.1 65391 D 366394 CDS YP_001325755.1 150395288 5320887 complement(65990..66586) 1 NC_009636.1 KEGG: sme:SMc01097 hypothetical/unknown transmembrane protein; hypothetical protein 66586 5320887 Smed_0060 Sinorhizobium medicae WSM419 hypothetical protein YP_001325755.1 65990 R 366394 CDS YP_001325756.1 150395289 5320888 complement(66573..67853) 1 NC_009636.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 67853 5320888 Smed_0061 Sinorhizobium medicae WSM419 succinyl-diaminopimelate desuccinylase YP_001325756.1 66573 R 366394 CDS YP_001325757.1 150395290 5320889 complement(67949..71134) 1 NC_009636.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sme:SMc01095 probable multidrug-efflux system transmembrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 71134 5320889 Smed_0062 Sinorhizobium medicae WSM419 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001325757.1 67949 R 366394 CDS YP_001325758.1 150395291 5320890 complement(71262..72470) 1 NC_009636.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc01094 putative multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit 72470 5320890 Smed_0063 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001325758.1 71262 R 366394 CDS YP_001325759.1 150395292 5320891 complement(72537..73349) 1 NC_009636.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sme:SMc01093 putative esterase protein; alpha/beta hydrolase domain-containing protein 73349 5320891 Smed_0064 Sinorhizobium medicae WSM419 alpha/beta hydrolase domain-containing protein YP_001325759.1 72537 R 366394 CDS YP_001325760.1 150395293 5320892 73489..74397 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01092 putative transcription regulator protein; LysR family transcriptional regulator 74397 5320892 Smed_0065 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001325760.1 73489 D 366394 CDS YP_001325761.1 150395294 5320893 complement(74407..74562) 1 NC_009636.1 KEGG: sme:SMc01091 hypothetical protein; hypothetical protein 74562 5320893 Smed_0066 Sinorhizobium medicae WSM419 hypothetical protein YP_001325761.1 74407 R 366394 CDS YP_001325762.1 150395295 5320894 complement(74665..76545) 1 NC_009636.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc01090 putative ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 76545 5320894 Smed_0067 Sinorhizobium medicae WSM419 DEAD/DEAH box helicase YP_001325762.1 74665 R 366394 CDS YP_001325763.1 150395296 5320895 complement(76698..77084) 1 NC_009636.1 PFAM: protein of unknown function DUF805; KEGG: sme:SMc01089 hypothetical protein; hypothetical protein 77084 5320895 Smed_0068 Sinorhizobium medicae WSM419 hypothetical protein YP_001325763.1 76698 R 366394 CDS YP_001325764.1 150395297 5320896 complement(77087..77944) 1 NC_009636.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 77944 dapD 5320896 dapD Sinorhizobium medicae WSM419 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001325764.1 77087 R 366394 CDS YP_001325765.1 150395298 5320897 78206..79105 1 NC_009636.1 PFAM: conserved hypothetical protein 730; KEGG: sme:SMc01731 hypothetical protein; hypothetical protein 79105 5320897 Smed_0070 Sinorhizobium medicae WSM419 hypothetical protein YP_001325765.1 78206 D 366394 CDS YP_001325766.1 150395299 5320898 complement(79106..79819) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc01730 hypothetical protein; pyrimidine 5'-nucleotidase 79819 5320898 Smed_0071 Sinorhizobium medicae WSM419 pyrimidine 5'-nucleotidase YP_001325766.1 79106 R 366394 CDS YP_001325767.1 150395300 5320899 80028..80942 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc01729 hypothetical protein; hypothetical protein 80942 5320899 Smed_0072 Sinorhizobium medicae WSM419 hypothetical protein YP_001325767.1 80028 D 366394 CDS YP_001325768.1 150395301 5320900 81018..82130 1 NC_009636.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01728 putative transcription regulator protein; methylated-DNA--protein-cysteine methyltransferase 82130 5320900 Smed_0073 Sinorhizobium medicae WSM419 methylated-DNA--protein-cysteine methyltransferase YP_001325768.1 81018 D 366394 CDS YP_001325769.1 150395302 5320901 82168..82944 1 NC_009636.1 KEGG: sme:SMc01727 hypothetical protein; hypothetical protein 82944 5320901 Smed_0074 Sinorhizobium medicae WSM419 hypothetical protein YP_001325769.1 82168 D 366394 CDS YP_001325770.1 150395303 5320902 complement(83044..83931) 1 NC_009636.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 83931 5320902 Smed_0075 Sinorhizobium medicae WSM419 acetylglutamate kinase YP_001325770.1 83044 R 366394 CDS YP_001325771.1 150395304 5320903 84285..84995 1 NC_009636.1 KEGG: sme:SMc01725 hypothetical protein; hypothetical protein 84995 5320903 Smed_0076 Sinorhizobium medicae WSM419 hypothetical protein YP_001325771.1 84285 D 366394 CDS YP_001325772.1 150395305 5320904 complement(85094..85633) 1 NC_009636.1 PFAM: membrane protein of uknown function UCP014873; KEGG: sme:SMc01723 hypothetical protein; hypothetical protein 85633 5320904 Smed_0077 Sinorhizobium medicae WSM419 hypothetical protein YP_001325772.1 85094 R 366394 CDS YP_001325773.1 150395306 5320905 complement(85776..86429) 1 NC_009636.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 86429 engB 5320905 engB Sinorhizobium medicae WSM419 ribosome biogenesis GTP-binding protein YsxC YP_001325773.1 85776 R 366394 CDS YP_001325774.1 150395307 5320906 complement(86577..88370) 1 NC_009636.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 88370 5320906 Smed_0079 Sinorhizobium medicae WSM419 putative inner membrane protein translocase component YidC YP_001325774.1 86577 R 366394 CDS YP_001325775.1 150395308 5320907 complement(88367..88765) 1 NC_009636.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 88765 rnpA 5320907 rnpA Sinorhizobium medicae WSM419 ribonuclease P YP_001325775.1 88367 R 366394 CDS YP_001325776.1 150395309 5320908 complement(88787..88921) 1 NC_009636.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 88921 rpmH 5320908 rpmH Sinorhizobium medicae WSM419 50S ribosomal protein L34 YP_001325776.1 88787 R 366394 CDS YP_001325777.1 150395310 5320909 89239..91236 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sme:SMc01719 probable chemoreceptor (methyl-accepting chemotaxis) transmembrane protein; methyl-accepting chemotaxis sensory transducer 91236 5320909 Smed_0082 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001325777.1 89239 D 366394 CDS YP_001325778.1 150395311 5320910 91523..92323 1 NC_009636.1 PFAM: SNARE associated Golgi protein; KEGG: sme:SMc01718 hypothetical protein; hypothetical protein 92323 5320910 Smed_0083 Sinorhizobium medicae WSM419 hypothetical protein YP_001325778.1 91523 D 366394 CDS YP_001325779.1 150395312 5320911 92349..93770 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: sme:SMc01717 putative mercuric reductase protein; pyridine nucleotide-disulfide oxidoreductase dimerisation region 93770 5320911 Smed_0084 Sinorhizobium medicae WSM419 pyridine nucleotide-disulfide oxidoreductase dimerisation region YP_001325779.1 92349 D 366394 CDS YP_001325780.1 150395313 5320912 93792..95273 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc01716 putative sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 95273 5320912 Smed_0085 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001325780.1 93792 D 366394 CDS YP_001325781.1 150395314 5320914 95969..97768 1 NC_009636.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: sme:SMc01708 hypothetical protein; YadA domain-containing protein 97768 5320914 Smed_0086 Sinorhizobium medicae WSM419 YadA domain-containing protein YP_001325781.1 95969 D 366394 CDS YP_001325782.1 150395315 5320915 97770..98345 1 NC_009636.1 PFAM: Invasion associated locus B family protein; KEGG: sme:SMc01707 conserved hypothetical signal peptide protein; invasion associated locus B family protein 98345 5320915 Smed_0087 Sinorhizobium medicae WSM419 invasion associated locus B family protein YP_001325782.1 97770 D 366394 CDS YP_001325783.1 150395316 5320916 98359..99045 1 NC_009636.1 KEGG: sme:SMc01706 conserved hypothetical signal peptide protein; putative signal peptide protein 99045 5320916 Smed_0088 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001325783.1 98359 D 366394 CDS YP_001325784.1 150395317 5320917 complement(99072..99542) 1 NC_009636.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc01705 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 99542 5320917 Smed_0089 Sinorhizobium medicae WSM419 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001325784.1 99072 R 366394 CDS YP_001325785.1 150395318 5320918 complement(99866..100297) 1 NC_009636.1 PFAM: Protein of unknown function DUF1810; KEGG: sme:SMc01703 hypothetical protein; hypothetical protein 100297 5320918 Smed_0090 Sinorhizobium medicae WSM419 hypothetical protein YP_001325785.1 99866 R 366394 CDS YP_001325786.1 150395319 5320919 complement(100484..101068) 1 NC_009636.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: sme:SMc01701 hypothetical protein; hypothetical protein 101068 5320919 Smed_0091 Sinorhizobium medicae WSM419 hypothetical protein YP_001325786.1 100484 R 366394 CDS YP_001325787.1 150395320 5320920 complement(101142..104843) 1 NC_009636.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the protein from Pseudomonas does not have this domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 104843 5320920 Smed_0092 Sinorhizobium medicae WSM419 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001325787.1 101142 R 366394 CDS YP_001325788.1 150395321 5320921 complement(105021..105341) 1 NC_009636.1 PFAM: protein of unknown function UPF0153; KEGG: sme:SMc02180 hypothetical protein; hypothetical protein 105341 5320921 Smed_0093 Sinorhizobium medicae WSM419 hypothetical protein YP_001325788.1 105021 R 366394 CDS YP_001325789.1 150395322 5320922 complement(105400..106206) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc02179 hypothetical protein; metallophosphoesterase 106206 5320922 Smed_0094 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001325789.1 105400 R 366394 CDS YP_001325790.1 150395323 5320923 complement(106316..106879) 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sme:SMc02178 hypothetical protein; Sel1 domain-containing protein 106879 5320923 Smed_0095 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001325790.1 106316 R 366394 CDS YP_001325791.1 150395324 5320924 107072..107686 1 NC_009636.1 KEGG: sme:SMc02177 hypothetical protein; hypothetical protein 107686 5320924 Smed_0096 Sinorhizobium medicae WSM419 hypothetical protein YP_001325791.1 107072 D 366394 CDS YP_001325792.1 150395325 5320925 complement(107735..109642) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: sme:SMc02176 putative adenylate cyclase transmembrane protein; putative Chase2 sensor protein 109642 5320925 Smed_0097 Sinorhizobium medicae WSM419 putative Chase2 sensor protein YP_001325792.1 107735 R 366394 CDS YP_001325793.1 150395326 5320926 complement(109731..110435) 1 NC_009636.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: sme:SMc02175 putative transcription regulator protein; CRP/FNR family transcriptional regulator 110435 5320926 Smed_0098 Sinorhizobium medicae WSM419 CRP/FNR family transcriptional regulator YP_001325793.1 109731 R 366394 CDS YP_001325794.1 150395327 5320927 110674..111111 1 NC_009636.1 PFAM: DoxX family protein; KEGG: sme:SMc02174 hypothetical protein; DoxX family protein 111111 5320927 Smed_0099 Sinorhizobium medicae WSM419 DoxX family protein YP_001325794.1 110674 D 366394 CDS YP_001325795.1 150395328 5320928 complement(111196..111624) 1 NC_009636.1 PFAM: RbsD or FucU transport; KEGG: sme:SMc02173 fucose operon fucU protein; transporter 111624 5320928 Smed_0100 Sinorhizobium medicae WSM419 transporter YP_001325795.1 111196 R 366394 CDS YP_001325796.1 150395329 5320929 complement(111629..112858) 1 NC_009636.1 PFAM: ROK family protein; KEGG: sme:SMc02172 putative transcription regulator protein; ROK family protein 112858 5320929 Smed_0101 Sinorhizobium medicae WSM419 ROK family protein YP_001325796.1 111629 R 366394 CDS YP_001325797.1 150395330 5320930 113078..114103 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMc02171 putative periplasmic binding ABC transporter protein; periplasmic binding protein/LacI transcriptional regulator 114103 5320930 Smed_0102 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001325797.1 113078 D 366394 CDS YP_001325798.1 150395331 5320931 114380..115462 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02170 putative permease ABC transporter protein; monosaccharide-transporting ATPase 115462 5320931 Smed_0103 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001325798.1 114380 D 366394 CDS YP_001325799.1 150395332 5320932 115462..116244 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02169 putative ATP-binding ABC transporter protein; ABC transporter-like protein 116244 5320932 Smed_0104 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325799.1 115462 D 366394 CDS YP_001325800.1 150395333 5320933 116241..116861 1 NC_009636.1 KEGG: sme:SMc02167 hypothetical protein; putative fructose transport system kinase 116861 frcK 5320933 frcK Sinorhizobium medicae WSM419 putative fructose transport system kinase YP_001325800.1 116241 D 366394 CDS YP_001325801.1 150395334 5320934 117052..118095 1 NC_009636.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 118095 5320934 Smed_0106 Sinorhizobium medicae WSM419 dihydroorotase YP_001325801.1 117052 D 366394 CDS YP_001325802.1 150395335 5320935 118169..118867 1 NC_009636.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 118867 pyrE 5320935 pyrE Sinorhizobium medicae WSM419 orotate phosphoribosyltransferase YP_001325802.1 118169 D 366394 CDS YP_001325803.1 150395336 5320936 118915..119847 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc02164 probable fructokinase protein; ribokinase-like domain-containing protein 119847 5320936 Smed_0108 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001325803.1 118915 D 366394 CDS YP_001325804.1 150395337 5320937 complement(119959..121584) 1 NC_009636.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 121584 pgi 5320937 pgi Sinorhizobium medicae WSM419 glucose-6-phosphate isomerase YP_001325804.1 119959 R 366394 CDS YP_001325805.1 150395338 5320938 complement(121776..123476) 1 NC_009636.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 123476 5320938 Smed_0110 Sinorhizobium medicae WSM419 long-chain-fatty-acid--CoA ligase YP_001325805.1 121776 R 366394 CDS YP_001325806.1 150395339 5320939 123998..125173 1 NC_009636.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMc02160 putative permease transmembrane transport protein; hypothetical protein 125173 5320939 Smed_0111 Sinorhizobium medicae WSM419 hypothetical protein YP_001325806.1 123998 D 366394 CDS YP_001325807.1 150395340 5320940 125269..125934 1 NC_009636.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc02159 hypothetical protein; CDP-alcohol phosphatidyltransferase 125934 5320940 Smed_0112 Sinorhizobium medicae WSM419 CDP-alcohol phosphatidyltransferase YP_001325807.1 125269 D 366394 CDS YP_001325808.1 150395341 5320941 125931..126542 1 NC_009636.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sme:SMc02158 putative acyltransferase protein; phospholipid/glycerol acyltransferase 126542 5320941 Smed_0113 Sinorhizobium medicae WSM419 phospholipid/glycerol acyltransferase YP_001325808.1 125931 D 366394 CDS YP_001325809.1 150395342 5320942 126550..127491 1 NC_009636.1 PFAM: phosphatidate cytidylyltransferase; KEGG: sme:SMc02157 hypothetical protein; phosphatidate cytidylyltransferase 127491 5320942 Smed_0114 Sinorhizobium medicae WSM419 phosphatidate cytidylyltransferase YP_001325809.1 126550 D 366394 CDS YP_001325810.1 150395343 5320944 complement(127699..128709) 1 NC_009636.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: sme:SMc02150 hypothetical protein; 2-nitropropane dioxygenase 128709 5320944 Smed_0115 Sinorhizobium medicae WSM419 2-nitropropane dioxygenase YP_001325810.1 127699 R 366394 CDS YP_001325811.1 150395344 5320945 129033..130190 1 NC_009636.1 KEGG: sme:SMc02149 hypothetical protein; hypothetical protein 130190 5320945 Smed_0116 Sinorhizobium medicae WSM419 hypothetical protein YP_001325811.1 129033 D 366394 CDS YP_001325812.1 150395345 5320946 complement(130254..131156) 1 NC_009636.1 PFAM: protein of unknown function DUF344; KEGG: sme:SMc02148 hypothetical protein; hypothetical protein 131156 5320946 Smed_0117 Sinorhizobium medicae WSM419 hypothetical protein YP_001325812.1 130254 R 366394 CDS YP_001325813.1 150395346 5320947 131391..132638 1 NC_009636.1 TIGRFAM: Phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: sme:SMc02147 probable phosphate regulon sensor histidine kinase transmembrane protein; PAS/PAC sensor signal transduction histidine kinase 132638 5320947 Smed_0118 Sinorhizobium medicae WSM419 PAS/PAC sensor signal transduction histidine kinase YP_001325813.1 131391 D 366394 CDS YP_001325814.1 150395347 5320948 132831..133865 1 NC_009636.1 KEGG: sme:SMc02146 putative phosphate-binding periplasmic protein; putative phosphate-binding periplasmic protein 133865 5320948 Smed_0119 Sinorhizobium medicae WSM419 putative phosphate-binding periplasmic protein YP_001325814.1 132831 D 366394 CDS YP_001325815.1 150395348 5320949 133960..135444 1 NC_009636.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_740 phosphate ABC transporter (permease); phosphate ABC transporter permease 135444 5320949 Smed_0120 Sinorhizobium medicae WSM419 phosphate ABC transporter permease YP_001325815.1 133960 D 366394 CDS YP_001325816.1 150395349 5320950 135441..136763 1 NC_009636.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02143 putative phosphate transport system permease ABC transporter protein; phosphate ABC transporter permease 136763 5320950 Smed_0121 Sinorhizobium medicae WSM419 phosphate ABC transporter permease YP_001325816.1 135441 D 366394 CDS YP_001325817.1 150395350 5320951 136777..137592 1 NC_009636.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 137592 5320951 Smed_0122 Sinorhizobium medicae WSM419 phosphate transporter ATP-binding protein YP_001325817.1 136777 D 366394 CDS YP_001325818.1 150395351 5320952 137681..138394 1 NC_009636.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: sme:SMc02141 probable phosphate transport system transcriptional regulator protein; phosphate uptake regulator PhoU 138394 5320952 Smed_0123 Sinorhizobium medicae WSM419 phosphate uptake regulator PhoU YP_001325818.1 137681 D 366394 CDS YP_001325819.1 150395352 5320953 138486..139169 1 NC_009636.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc02140 phosphate regulon transcriptional regulatory protein; two component transcriptional regulator 139169 5320953 Smed_0124 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001325819.1 138486 D 366394 CDS YP_001325820.1 150395353 5320954 complement(139329..139805) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aminoglycoside acetyltransferase (6') type I; N-acetyltransferase GCN5 139805 5320954 Smed_0125 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001325820.1 139329 R 366394 CDS YP_001325821.1 150395354 5320955 complement(139880..140443) 1 NC_009636.1 PFAM: GcrA cell cycle regulator; KEGG: sme:SMc02139 hypothetical protein; GcrA cell cycle regulator 140443 5320955 Smed_0126 Sinorhizobium medicae WSM419 GcrA cell cycle regulator YP_001325821.1 139880 R 366394 CDS YP_001325822.1 150395355 5320956 140812..142011 1 NC_009636.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase 142011 argD 5320956 argD Sinorhizobium medicae WSM419 acetylornithine transaminase YP_001325822.1 140812 D 366394 CDS YP_001325823.1 150395356 5320957 142052..142963 1 NC_009636.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 142963 5320957 Smed_0128 Sinorhizobium medicae WSM419 ornithine carbamoyltransferase YP_001325823.1 142052 D 366394 CDS YP_001325824.1 150395357 5320958 143372..144364 1 NC_009636.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 144364 hslO 5320958 hslO Sinorhizobium medicae WSM419 Hsp33-like chaperonin YP_001325824.1 143372 D 366394 CDS YP_001325825.1 150395358 5320959 complement(144453..144845) 1 NC_009636.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 144845 apaG 5320959 apaG Sinorhizobium medicae WSM419 ApaG protein YP_001325825.1 144453 R 366394 CDS YP_001325826.1 150395359 5320960 complement(145040..146011) 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 146011 5320960 Smed_0131 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001325826.1 145040 R 366394 CDS YP_001325827.1 150395360 5320961 146248..146865 1 NC_009636.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc02134 hypothetical protein; CDP-alcohol phosphatidyltransferase 146865 5320961 Smed_0132 Sinorhizobium medicae WSM419 CDP-alcohol phosphatidyltransferase YP_001325827.1 146248 D 366394 CDS YP_001325828.1 150395361 5320962 complement(146933..148117) 1 NC_009636.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 148117 5320962 Smed_0133 Sinorhizobium medicae WSM419 O-succinylhomoserine sulfhydrylase YP_001325828.1 146933 R 366394 CDS YP_001325829.1 150395362 5320963 148315..149412 1 NC_009636.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 149412 5320963 Smed_0134 Sinorhizobium medicae WSM419 2'-deoxycytidine 5'-triphosphate deaminase YP_001325829.1 148315 D 366394 CDS YP_001325830.1 150395363 5320965 149658..150509 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc02219 putative amino acid-binding periplasmic protein; extracellular solute-binding protein 150509 5320965 Smed_0135 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001325830.1 149658 D 366394 CDS YP_001325831.1 150395364 5320966 complement(150611..151423) 1 NC_009636.1 KEGG: sme:SMc02220 hypothetical protein; hypothetical protein 151423 5320966 Smed_0136 Sinorhizobium medicae WSM419 hypothetical protein YP_001325831.1 150611 R 366394 CDS YP_001325832.1 150395365 5320967 complement(151484..151894) 1 NC_009636.1 KEGG: sme:SMc02221 hypothetical protein; hypothetical protein 151894 5320967 Smed_0137 Sinorhizobium medicae WSM419 hypothetical protein YP_001325832.1 151484 R 366394 CDS YP_001325833.1 150395366 5320968 complement(151960..152805) 1 NC_009636.1 KEGG: sme:SMc02222 hypothetical protein; hypothetical protein 152805 5320968 Smed_0138 Sinorhizobium medicae WSM419 hypothetical protein YP_001325833.1 151960 R 366394 CDS YP_001325834.1 150395367 5320969 complement(152806..153453) 1 NC_009636.1 PFAM: peptidase S24 S26A and S26B; KEGG: sme:SMc02223 putative transcription regulator protein; putative phage repressor 153453 5320969 Smed_0139 Sinorhizobium medicae WSM419 putative phage repressor YP_001325834.1 152806 R 366394 CDS YP_001325835.1 150395368 5320970 153714..154838 1 NC_009636.1 PFAM: sodium/calcium exchanger membrane region; KEGG: sme:SMc02224 putative calcium/proton antiporter transmembrane protein; sodium/calcium exchanger membrane region 154838 5320970 Smed_0140 Sinorhizobium medicae WSM419 sodium/calcium exchanger membrane region YP_001325835.1 153714 D 366394 CDS YP_001325836.1 150395369 5320971 complement(154813..155376) 1 NC_009636.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02225 hypothetical protein; HxlR family transcriptional regulator 155376 5320971 Smed_0141 Sinorhizobium medicae WSM419 HxlR family transcriptional regulator YP_001325836.1 154813 R 366394 CDS YP_001325837.1 150395370 5320972 155503..155976 1 NC_009636.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc02226 hypothetical protein; activator of Hsp90 ATPase 1 family protein 155976 5320972 Smed_0142 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001325837.1 155503 D 366394 CDS YP_001325838.1 150395371 5320974 complement(156309..158519) 1 NC_009636.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: sme:SMc02227 putative fatty oxidation complex alpha subunit includes: enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase, 3-hydroxybutyryl-CoA epimerase transmembrane protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 158519 5320974 Smed_0144 Sinorhizobium medicae WSM419 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001325838.1 156309 R 366394 CDS YP_001325839.1 150395372 5320975 complement(158541..159749) 1 NC_009636.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 159749 5320975 Smed_0145 Sinorhizobium medicae WSM419 acetyl-CoA acetyltransferase YP_001325839.1 158541 R 366394 CDS YP_001325840.1 150395373 5320976 complement(159853..161649) 1 NC_009636.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sme:SMc02229 putative acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 161649 5320976 Smed_0146 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001325840.1 159853 R 366394 CDS YP_001325841.1 150395374 5320977 162099..165779 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; Sel1 domain protein repeat-containing protein; KEGG: sme:SMc02230 hypothetical protein; peptidoglycan binding domain-containing protein 165779 5320977 Smed_0147 Sinorhizobium medicae WSM419 peptidoglycan binding domain-containing protein YP_001325841.1 162099 D 366394 CDS YP_001325842.1 150395375 5320978 166098..167024 1 NC_009636.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMc02232 hypothetical transmembrane protein; hypothetical protein 167024 5320978 Smed_0148 Sinorhizobium medicae WSM419 hypothetical protein YP_001325842.1 166098 D 366394 CDS YP_001325843.1 150395376 5320979 167024..167827 1 NC_009636.1 KEGG: sme:SMc02234 hypothetical protein; hypothetical protein 167827 5320979 Smed_0149 Sinorhizobium medicae WSM419 hypothetical protein YP_001325843.1 167024 D 366394 CDS YP_001325844.1 150395377 5320980 168038..168445 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMa0112 hypothetical protein; glutathione-dependent formaldehyde-activating protein 168445 5320980 Smed_0150 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001325844.1 168038 D 366394 CDS YP_001325845.1 150395378 5320981 168552..168788 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc02235 putative transcription regulator protein; AsnC family transcriptional regulator 168788 5320981 Smed_0151 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001325845.1 168552 D 366394 CDS YP_001325846.1 150395379 5320982 complement(168839..169564) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc02236 hypothetical protein; metallophosphoesterase 169564 5320982 Smed_0152 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001325846.1 168839 R 366394 CDS YP_001325847.1 150395380 5320983 complement(169674..172328) 1 NC_009636.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc02237 putative ATP-dependent helicase protein; DEAD/DEAH box helicase 172328 5320983 Smed_0153 Sinorhizobium medicae WSM419 DEAD/DEAH box helicase YP_001325847.1 169674 R 366394 CDS YP_001325848.1 150395381 5320984 172360..172866 1 NC_009636.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc02238 hypothetical protein; BadM/Rrf2 family transcriptional regulator 172866 5320984 Smed_0154 Sinorhizobium medicae WSM419 BadM/Rrf2 family transcriptional regulator YP_001325848.1 172360 D 366394 CDS YP_001325849.1 150395382 5320985 172895..173356 1 NC_009636.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMc02239 hypothetical protein; alkylhydroperoxidase 173356 5320985 Smed_0155 Sinorhizobium medicae WSM419 alkylhydroperoxidase YP_001325849.1 172895 D 366394 CDS YP_001325850.1 150395383 5320986 complement(173458..174093) 1 NC_009636.1 PFAM: protein of unknown function DUF161; KEGG: sme:SMc02240 hypothetical protein; hypothetical protein 174093 5320986 Smed_0156 Sinorhizobium medicae WSM419 hypothetical protein YP_001325850.1 173458 R 366394 CDS YP_001325851.1 150395384 5320987 complement(174199..175215) 1 NC_009636.1 PFAM: Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc02241 hypothetical protein; type 12 methyltransferase 175215 5320987 Smed_0157 Sinorhizobium medicae WSM419 type 12 methyltransferase YP_001325851.1 174199 R 366394 CDS YP_001325852.1 150395385 5320988 175285..175551 1 NC_009636.1 KEGG: sme:SMc02242 hypothetical protein; hypothetical protein 175551 5320988 Smed_0158 Sinorhizobium medicae WSM419 hypothetical protein YP_001325852.1 175285 D 366394 CDS YP_001325853.1 150395386 5320989 175554..176057 1 NC_009636.1 PFAM: SCP-like extracellular; KEGG: sme:SMc02243 hypothetical protein; hypothetical protein 176057 5320989 Smed_0159 Sinorhizobium medicae WSM419 hypothetical protein YP_001325853.1 175554 D 366394 CDS YP_001325854.1 150395387 5320990 176103..177473 1 NC_009636.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sme:SMc02244 putative transmembrane protein; MATE efflux family protein 177473 5320990 Smed_0160 Sinorhizobium medicae WSM419 MATE efflux family protein YP_001325854.1 176103 D 366394 CDS YP_001325855.1 150395388 5320991 complement(177449..178537) 1 NC_009636.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 178537 5320991 Smed_0161 Sinorhizobium medicae WSM419 dihydroorotate dehydrogenase 2 YP_001325855.1 177449 R 366394 CDS YP_001325856.1 150395389 5320992 complement(178534..178881) 1 NC_009636.1 PFAM: protein of unknown function DUF952; KEGG: sme:SMc02246 hypothetical protein; hypothetical protein 178881 5320992 Smed_0162 Sinorhizobium medicae WSM419 hypothetical protein YP_001325856.1 178534 R 366394 CDS YP_001325857.1 150395390 5320993 179000..179437 1 NC_009636.1 KEGG: sme:SMc02247 conserved hypothetical signal peptide protein; putative signal peptide protein 179437 5320993 Smed_0163 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001325857.1 179000 D 366394 CDS YP_001325858.1 150395391 5320994 179573..180220 1 NC_009636.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMc02248 putative transcription regulator protein; two component LuxR family transcriptional regulator 180220 5320994 Smed_0164 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001325858.1 179573 D 366394 CDS YP_001325859.1 150395392 5320995 complement(180354..183860) 1 NC_009636.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc02249 putative sensory transduction histidine kinase transmembrane protein; integral membrane sensor hybrid histidine kinase 183860 5320995 Smed_0165 Sinorhizobium medicae WSM419 integral membrane sensor hybrid histidine kinase YP_001325859.1 180354 R 366394 CDS YP_001325860.1 150395393 5320996 184078..184506 1 NC_009636.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 184506 mscL 5320996 mscL Sinorhizobium medicae WSM419 large-conductance mechanosensitive channel YP_001325860.1 184078 D 366394 CDS YP_001325861.1 150395394 5320997 184634..185800 1 NC_009636.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 185800 5320997 Smed_0167 Sinorhizobium medicae WSM419 aspartate aminotransferase YP_001325861.1 184634 D 366394 CDS YP_001325862.1 150395395 5320998 185971..186999 1 NC_009636.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: sme:SMc02252 probable UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 186999 5320998 Smed_0168 Sinorhizobium medicae WSM419 UDP-glucose 4-epimerase YP_001325862.1 185971 D 366394 CDS YP_001325863.1 150395396 5320999 complement(187021..187332) 1 NC_009636.1 TIGRFAM: chorismate mutase related enzymes; PFAM: Chorismate mutase; KEGG: sme:SMc02253 putative salicylate biosynthesis protein; chorismate mutase-related enzyme 187332 5320999 Smed_0169 Sinorhizobium medicae WSM419 chorismate mutase-related enzyme YP_001325863.1 187021 R 366394 CDS YP_001325864.1 150395397 5321000 complement(187554..188558) 1 NC_009636.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: sme:SMc02254 putative quinol oxidase subunit II transmembrane protein; cytochrome d ubiquinol oxidase subunit II 188558 5321000 Smed_0170 Sinorhizobium medicae WSM419 cytochrome d ubiquinol oxidase subunit II YP_001325864.1 187554 R 366394 CDS YP_001325865.1 150395398 5321001 complement(188548..189963) 1 NC_009636.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sme:SMc02255 putative quinol oxidase subunit I transmembrane protein; cytochrome bd ubiquinol oxidase subunit I 189963 5321001 Smed_0171 Sinorhizobium medicae WSM419 cytochrome bd ubiquinol oxidase subunit I YP_001325865.1 188548 R 366394 CDS YP_001325866.1 150395399 5321002 complement(190274..191440) 1 NC_009636.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sme:SMc02256 putative hippurate hydrolase protein; amidohydrolase 191440 5321002 Smed_0172 Sinorhizobium medicae WSM419 amidohydrolase YP_001325866.1 190274 R 366394 CDS YP_001325867.1 150395400 5321003 complement(191442..192266) 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02257 putative transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 192266 5321003 Smed_0173 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001325867.1 191442 R 366394 CDS YP_001325868.1 150395401 5321004 complement(192263..192988) 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02258 putative transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 192988 5321004 Smed_0174 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001325868.1 192263 R 366394 CDS YP_001325869.1 150395402 5321005 complement(193094..193876) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc02259 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 193876 5321005 Smed_0175 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001325869.1 193094 R 366394 CDS YP_001325870.1 150395403 5321006 complement(193911..194684) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02260 putative ATP-binding ABC transporter protein; ABC transporter-like protein 194684 5321006 Smed_0176 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325870.1 193911 R 366394 CDS YP_001325871.1 150395404 5321007 194951..195577 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc02261 putative transcription regulator protein; TetR family transcriptional regulator 195577 5321007 Smed_0177 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001325871.1 194951 D 366394 CDS YP_001325872.1 150395405 5321008 195590..196780 1 NC_009636.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: sme:SMc02262 putative aminotransferase protein; class I and II aminotransferase 196780 5321008 Smed_0178 Sinorhizobium medicae WSM419 class I and II aminotransferase YP_001325872.1 195590 D 366394 CDS YP_001325873.1 150395406 5321009 196777..198390 1 NC_009636.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sme:SMc02263 acetolactate synthase large subunit; hypothetical protein 198390 5321009 Smed_0179 Sinorhizobium medicae WSM419 hypothetical protein YP_001325873.1 196777 D 366394 CDS YP_001325874.1 150395407 5321010 198571..198993 1 NC_009636.1 KEGG: sme:SMc02264 hypothetical protein; hypothetical protein 198993 5321010 Smed_0180 Sinorhizobium medicae WSM419 hypothetical protein YP_001325874.1 198571 D 366394 CDS YP_001325875.1 150395408 5321011 199089..201623 1 NC_009636.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 201623 5321011 Smed_0181 Sinorhizobium medicae WSM419 bifunctional preprotein translocase subunit SecD/SecF YP_001325875.1 199089 D 366394 CDS YP_001325876.1 150395409 5321012 202141..202356 1 NC_009636.1 KEGG: sme:SMc02266 hypothetical protein; hypothetical protein 202356 5321012 Smed_0182 Sinorhizobium medicae WSM419 hypothetical protein YP_001325876.1 202141 D 366394 CDS YP_001325877.1 150395410 5321013 complement(202358..203437) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3677 ABC sugar transporter, ATPase subunit; ABC transporter-like protein 203437 5321013 Smed_0183 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325877.1 202358 R 366394 CDS YP_001325878.1 150395411 5321014 203535..204221 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rsp:RSP_3676 transcriptional regulator, GntR family; GntR family transcriptional regulator 204221 5321014 Smed_0184 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001325878.1 203535 D 366394 CDS YP_001325879.1 150395412 5321015 204218..205198 1 NC_009636.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rsp:RSP_3675 esterase/lipase/thioesterase; alpha/beta hydrolase domain-containing protein 205198 5321015 Smed_0185 Sinorhizobium medicae WSM419 alpha/beta hydrolase domain-containing protein YP_001325879.1 204218 D 366394 CDS YP_001325880.1 150395413 5321016 205222..206415 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: rsp:RSP_3674 ABC sugar transporter, periplasmic binding protein; extracellular solute-binding protein 206415 5321016 Smed_0186 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001325880.1 205222 D 366394 CDS YP_001325881.1 150395414 5321017 206521..207444 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3673 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 207444 5321017 Smed_0187 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001325881.1 206521 D 366394 CDS YP_001325882.1 150395415 5321018 207441..208274 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3672 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 208274 5321018 Smed_0188 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001325882.1 207441 D 366394 CDS YP_001325883.1 150395416 5321019 208298..209179 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rsp:RSP_3671 putative D-tagatose 3-epimerase; xylose isomerase domain-containing protein 209179 5321019 Smed_0189 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001325883.1 208298 D 366394 CDS YP_001325884.1 150395417 5321020 209176..210171 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsp:RSP_3670 putative oxidoreductase myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 210171 5321020 Smed_0190 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001325884.1 209176 D 366394 CDS YP_001325885.1 150395418 5321021 210331..210792 1 NC_009636.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sme:SMc02267 hypothetical protein; BadM/Rrf2 family transcriptional regulator 210792 5321021 Smed_0191 Sinorhizobium medicae WSM419 BadM/Rrf2 family transcriptional regulator YP_001325885.1 210331 D 366394 CDS YP_001325886.1 150395419 5321022 210924..211928 1 NC_009636.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: sme:SMc02268 putative capsule expression protein; KpsF/GutQ family protein 211928 5321022 Smed_0192 Sinorhizobium medicae WSM419 KpsF/GutQ family protein YP_001325886.1 210924 D 366394 CDS YP_001325887.1 150395420 5321023 complement(211898..213220) 1 NC_009636.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: sme:SMc02269 capsular polysaccharide biosynthesis/export protein; capsule polysaccharide biosynthesis protein 213220 5321023 Smed_0193 Sinorhizobium medicae WSM419 capsule polysaccharide biosynthesis protein YP_001325887.1 211898 R 366394 CDS YP_001325888.1 150395421 5321024 complement(213236..214828) 1 NC_009636.1 PFAM: sulfatase; KEGG: sme:SMc02270 capsular polysaccharide biosynthesis/export transmembrane protein; sulfatase 214828 5321024 Smed_0194 Sinorhizobium medicae WSM419 sulfatase YP_001325888.1 213236 R 366394 CDS YP_001325889.1 150395422 5321025 complement(215039..215842) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02271 ribitol type dehydrogenase protein; short-chain dehydrogenase/reductase SDR 215842 5321025 Smed_0195 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001325889.1 215039 R 366394 CDS YP_001325890.1 150395423 5321026 complement(215882..217294) 1 NC_009636.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: sme:SMc02272 acyl-transferase transferase protein; 8-amino-7-oxononanoate synthase 217294 5321026 Smed_0196 Sinorhizobium medicae WSM419 8-amino-7-oxononanoate synthase YP_001325890.1 215882 R 366394 CDS YP_001325891.1 150395424 5321027 complement(217291..224793) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sme:SMc02273 fatty acid synthase transmembrane protein; beta-ketoacyl synthase 224793 5321027 Smed_0197 Sinorhizobium medicae WSM419 beta-ketoacyl synthase YP_001325891.1 217291 R 366394 CDS YP_001325892.1 150395425 5321028 225195..226382 1 NC_009636.1 PFAM: polysaccharide export protein; KEGG: sme:SMc02274 capsule polysaccharide exporter protein; polysaccharide export protein 226382 5321028 Smed_0198 Sinorhizobium medicae WSM419 polysaccharide export protein YP_001325892.1 225195 D 366394 CDS YP_001325893.1 150395426 5321029 226557..227156 1 NC_009636.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMc02275 probable pyrazinamidase/nicotinamidase (includes: pyrazinamidase, nicotinamidase) protein; nicotinamidase 227156 5321029 Smed_0199 Sinorhizobium medicae WSM419 nicotinamidase YP_001325893.1 226557 D 366394 CDS YP_001325894.1 150395427 5321030 227261..228565 1 NC_009636.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 228565 5321030 Smed_0200 Sinorhizobium medicae WSM419 nicotinate phosphoribosyltransferase YP_001325894.1 227261 D 366394 CDS YP_001325895.1 150395428 5321031 228702..228914 1 NC_009636.1 KEGG: sme:SMc02277 hypothetical unknown protein; hypothetical protein 228914 5321031 Smed_0201 Sinorhizobium medicae WSM419 hypothetical protein YP_001325895.1 228702 D 366394 CDS YP_001325896.1 150395429 5321032 complement(229003..229563) 1 NC_009636.1 KEGG: sme:SMc02278 hypothetical unknown transmembrane protein; hypothetical protein 229563 5321032 Smed_0202 Sinorhizobium medicae WSM419 hypothetical protein YP_001325896.1 229003 R 366394 CDS YP_001325897.1 150395430 5321033 229663..231639 1 NC_009636.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sme:SMa1905 putative MrcB penicillin binding protein B; 1A family penicillin-binding protein 231639 5321033 Smed_0203 Sinorhizobium medicae WSM419 1A family penicillin-binding protein YP_001325897.1 229663 D 366394 CDS YP_001325898.1 150395431 5321034 231848..232351 1 NC_009636.1 hypothetical protein 232351 5321034 Smed_0204 Sinorhizobium medicae WSM419 hypothetical protein YP_001325898.1 231848 D 366394 CDS YP_001325899.1 150395432 5321036 232876..233082 1 NC_009636.1 KEGG: sme:SMc02304 hypothetical protein; hypothetical protein 233082 5321036 Smed_0205 Sinorhizobium medicae WSM419 hypothetical protein YP_001325899.1 232876 D 366394 CDS YP_001325900.1 150395433 5321037 233241..234533 1 NC_009636.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 234533 5321037 Smed_0206 Sinorhizobium medicae WSM419 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001325900.1 233241 D 366394 CDS YP_001325901.1 150395434 5321038 234624..235064 1 NC_009636.1 KEGG: sme:SMc02306 hypothetical protein; hypothetical protein 235064 5321038 Smed_0207 Sinorhizobium medicae WSM419 hypothetical protein YP_001325901.1 234624 D 366394 CDS YP_001325902.1 150395435 5321039 235116..236420 1 NC_009636.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 236420 hisD 5321039 hisD Sinorhizobium medicae WSM419 histidinol dehydrogenase YP_001325902.1 235116 D 366394 CDS YP_001325903.1 150395436 5321040 236417..236893 1 NC_009636.1 PFAM: uncharacterised conserved protein UCP032146; KEGG: sme:SMc02308 hypothetical protein; hypothetical protein 236893 5321040 Smed_0209 Sinorhizobium medicae WSM419 hypothetical protein YP_001325903.1 236417 D 366394 CDS YP_001325904.1 150395437 5321041 236907..237386 1 NC_009636.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sme:SMc02309 putative arsenate reductase protein; protein tyrosine phosphatase 237386 5321041 Smed_0210 Sinorhizobium medicae WSM419 protein tyrosine phosphatase YP_001325904.1 236907 D 366394 CDS YP_001325905.1 150395438 5321042 237499..237762 1 NC_009636.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 237762 infA 5321042 infA Sinorhizobium medicae WSM419 translation initiation factor IF-1 YP_001325905.1 237499 D 366394 CDS YP_001325906.1 150395439 5321043 237816..238481 1 NC_009636.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 238481 5321043 Smed_0212 Sinorhizobium medicae WSM419 Maf-like protein YP_001325906.1 237816 D 366394 CDS YP_001325907.1 150395440 5321044 238486..238698 1 NC_009636.1 PFAM: protein of unknown function DUF329; KEGG: sme:SMc02312 zinc-binding protein; zinc-binding protein 238698 5321044 Smed_0213 Sinorhizobium medicae WSM419 zinc-binding protein YP_001325907.1 238486 D 366394 CDS YP_001325908.1 150395441 5321046 complement(239321..239563) 1 NC_009636.1 KEGG: rso:RSc0974 probable transmembrane protein; hypothetical protein 239563 5321046 Smed_0214 Sinorhizobium medicae WSM419 hypothetical protein YP_001325908.1 239321 R 366394 CDS YP_001325909.1 150395442 5321047 239780..240880 1 NC_009636.1 KEGG: sme:SMc02314 hypothetical protein; HPr kinase 240880 5321047 Smed_0215 Sinorhizobium medicae WSM419 HPr kinase YP_001325909.1 239780 D 366394 CDS YP_001325910.1 150395443 5321048 240867..241949 1 NC_009636.1 KEGG: sme:SMc02315 hypothetical unknown protein; hypothetical protein 241949 5321048 Smed_0216 Sinorhizobium medicae WSM419 hypothetical protein YP_001325910.1 240867 D 366394 CDS YP_001325911.1 150395444 5321049 242157..242468 1 NC_009636.1 KEGG: sme:SMc02316 hypothetical protein; hypothetical protein 242468 5321049 Smed_0217 Sinorhizobium medicae WSM419 hypothetical protein YP_001325911.1 242157 D 366394 CDS YP_001325912.1 150395445 5321050 complement(242822..243211) 1 NC_009636.1 PFAM: protein of unknown function DUF930; KEGG: sme:SMc02317 hypothetical signal peptide protein; hypothetical protein 243211 5321050 Smed_0218 Sinorhizobium medicae WSM419 hypothetical protein YP_001325912.1 242822 R 366394 CDS YP_001325913.1 150395446 5321051 complement(243362..243823) 1 NC_009636.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc02318 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 243823 5321051 Smed_0219 Sinorhizobium medicae WSM419 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001325913.1 243362 R 366394 CDS YP_001325914.1 150395447 5321052 complement(243898..244086) 1 NC_009636.1 KEGG: sme:SMc02319 hypothetical unknown protein; hypothetical protein 244086 5321052 Smed_0220 Sinorhizobium medicae WSM419 hypothetical protein YP_001325914.1 243898 R 366394 CDS YP_001325915.1 150395448 5321053 complement(244149..244403) 1 NC_009636.1 PFAM: Transglycosylase-associated protein; KEGG: sme:SMc02320 hypothetical protein; transglycosylase-associated protein 244403 5321053 Smed_0221 Sinorhizobium medicae WSM419 transglycosylase-associated protein YP_001325915.1 244149 R 366394 CDS YP_001325916.1 150395449 5321054 complement(244557..245849) 1 NC_009636.1 TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc02321 putative sugar isomerase protein; L-rhamnose catabolism isomerase 245849 5321054 Smed_0222 Sinorhizobium medicae WSM419 L-rhamnose catabolism isomerase YP_001325916.1 244557 R 366394 CDS YP_001325917.1 150395450 5321055 complement(245863..247962) 1 NC_009636.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02322 short chain dehydrogenase; short chain dehydrogenase 247962 5321055 Smed_0223 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001325917.1 245863 R 366394 CDS YP_001325918.1 150395451 5321056 248159..248971 1 NC_009636.1 PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: sme:SMc02323 putative transcription regulator protein; DeoR family transcriptional regulator 248971 5321056 Smed_0224 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001325918.1 248159 D 366394 CDS YP_001325919.1 150395452 5321057 249084..250073 1 NC_009636.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: sme:SMc02324 putative periplasmic binding ABC transporter protein; rhamnose ABC transporter periplasmic rhamnose-binding protein 250073 5321057 Smed_0225 Sinorhizobium medicae WSM419 rhamnose ABC transporter periplasmic rhamnose-binding protein YP_001325919.1 249084 D 366394 CDS YP_001325920.1 150395453 5321058 250372..251883 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02325 putative ATP-binding ABC transporter protein; ABC transporter-like protein 251883 5321058 Smed_0226 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325920.1 250372 D 366394 CDS YP_001325921.1 150395454 5321059 251880..252860 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc03000 putative permease ABC transporter protein; monosaccharide-transporting ATPase 252860 5321059 Smed_0227 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001325921.1 251880 D 366394 CDS YP_001325922.1 150395455 5321060 252860..253864 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc03001 putative permease ABC transporter protein; monosaccharide-transporting ATPase 253864 5321060 Smed_0228 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001325922.1 252860 D 366394 CDS YP_001325923.1 150395456 5321061 253875..254189 1 NC_009636.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: sme:SMc03002 conserved hypothetical protein; L-rhamnose 1-epimerase 254189 5321061 Smed_0229 Sinorhizobium medicae WSM419 L-rhamnose 1-epimerase YP_001325923.1 253875 D 366394 CDS YP_001325924.1 150395457 5321062 254186..255577 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc03003 hypothetical protein; carbohydrate kinase FGGY 255577 5321062 Smed_0230 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001325924.1 254186 D 366394 CDS YP_001325925.1 150395458 5321063 complement(255618..255842) 1 NC_009636.1 hypothetical protein 255842 5321063 Smed_0231 Sinorhizobium medicae WSM419 hypothetical protein YP_001325925.1 255618 R 366394 CDS YP_001325926.1 150395459 5321064 256305..257903 1 NC_009636.1 PFAM: chemotaxis sensory transducer; KEGG: sme:SMc03004 putative chemoreceptor (methyl-accepting chemotaxis protein); methyl-accepting chemotaxis sensory transducer 257903 5321064 Smed_0232 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001325926.1 256305 D 366394 CDS YP_001325927.1 150395460 5321065 257929..258222 1 NC_009636.1 KEGG: sme:SMc03005 putative chemotaxis protein CheX; putative chemotaxis protein CheX 258222 5321065 Smed_0233 Sinorhizobium medicae WSM419 putative chemotaxis protein CheX YP_001325927.1 257929 D 366394 CDS YP_001325928.1 150395461 5321066 258226..258591 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc03006 chemotaxis regulator protein; response regulator receiver protein 258591 5321066 Smed_0234 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001325928.1 258226 D 366394 CDS YP_001325929.1 150395462 5321067 258611..260890 1 NC_009636.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sme:SMc03007 chemotaxis protein (sensory transduction histidine kinase); CheA signal transduction histidine kinase 260890 5321067 Smed_0235 Sinorhizobium medicae WSM419 CheA signal transduction histidine kinase YP_001325929.1 258611 D 366394 CDS YP_001325930.1 150395463 5321068 260887..261363 1 NC_009636.1 PFAM: CheW domain protein; KEGG: sme:SMc03008 chemotaxis protein; putative CheW protein 261363 5321068 Smed_0236 Sinorhizobium medicae WSM419 putative CheW protein YP_001325930.1 260887 D 366394 CDS YP_001325931.1 150395464 5321069 261360..262283 1 NC_009636.1 PFAM: MCP methyltransferase CheR-type; KEGG: sme:SMc03009 chemotaxis protein methyltransferase; protein-glutamate O-methyltransferase 262283 5321069 Smed_0237 Sinorhizobium medicae WSM419 protein-glutamate O-methyltransferase YP_001325931.1 261360 D 366394 CDS YP_001325932.1 150395465 5321070 262280..263329 1 NC_009636.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 263329 5321070 Smed_0238 Sinorhizobium medicae WSM419 chemotaxis-specific methylesterase YP_001325932.1 262280 D 366394 CDS YP_001325933.1 150395466 5321071 263329..263718 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc03011 chemotaxis regulator protein; response regulator receiver protein 263718 5321071 Smed_0239 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001325933.1 263329 D 366394 CDS YP_001325934.1 150395467 5321072 263715..264266 1 NC_009636.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 264266 5321072 Smed_0240 Sinorhizobium medicae WSM419 chemoreceptor glutamine deamidase CheD YP_001325934.1 263715 D 366394 CDS YP_001325935.1 150395468 5321073 264321..264698 1 NC_009636.1 KEGG: sme:SMc03013 hypothetical protein; hypothetical protein 264698 5321073 Smed_0241 Sinorhizobium medicae WSM419 hypothetical protein YP_001325935.1 264321 D 366394 CDS YP_001325936.1 150395469 5321074 264942..266615 1 NC_009636.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 266615 fliF 5321074 fliF Sinorhizobium medicae WSM419 flagellar MS-ring protein YP_001325936.1 264942 D 366394 CDS YP_001325937.1 150395470 5321075 267436..268173 1 NC_009636.1 PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; KEGG: sme:SMc03015 putative transcription regulator protein; regulatory protein LuxR 268173 5321075 Smed_0243 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001325937.1 267436 D 366394 CDS YP_001325938.1 150395471 5321076 268184..268927 1 NC_009636.1 PFAM: regulatory protein LuxR; KEGG: sme:SMc03016 putative transcription regulator protein; response regulator receiver protein 268927 5321076 Smed_0244 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001325938.1 268184 D 366394 CDS YP_001325939.1 150395472 5321077 complement(269011..269451) 1 NC_009636.1 KEGG: sme:SMc03017 hypothetical protein; hypothetical protein 269451 5321077 Smed_0245 Sinorhizobium medicae WSM419 hypothetical protein YP_001325939.1 269011 R 366394 CDS YP_001325940.1 150395473 5321078 complement(269454..270536) 1 NC_009636.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 270536 flhB 5321078 flhB Sinorhizobium medicae WSM419 flagellar biosynthesis protein FlhB YP_001325940.1 269454 R 366394 CDS YP_001325941.1 150395474 5321079 complement(270709..271746) 1 NC_009636.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 271746 fliG 5321079 fliG Sinorhizobium medicae WSM419 flagellar motor switch protein G YP_001325941.1 270709 R 366394 CDS YP_001325942.1 150395475 5321080 complement(271834..272481) 1 NC_009636.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: sme:SMc03020 flagellar motor switch protein; flagellar motor switch protein FliN 272481 5321080 Smed_0248 Sinorhizobium medicae WSM419 flagellar motor switch protein FliN YP_001325942.1 271834 R 366394 CDS YP_001325943.1 150395476 5321081 complement(272501..273448) 1 NC_009636.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: sme:SMc03021 flagellar motor switch transmembrane protein; surface presentation of antigens (SPOA) protein 273448 5321081 Smed_0249 Sinorhizobium medicae WSM419 surface presentation of antigens (SPOA) protein YP_001325943.1 272501 R 366394 CDS YP_001325944.1 150395477 5321082 complement(273450..274328) 1 NC_009636.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 274328 5321082 Smed_0250 Sinorhizobium medicae WSM419 flagellar motor protein MotA YP_001325944.1 273450 R 366394 CDS YP_001325945.1 150395478 5321083 274499..275278 1 NC_009636.1 PFAM: protein of unknown function DUF1217; KEGG: sme:SMc03023 hypothetical protein; hypothetical protein 275278 5321083 Smed_0251 Sinorhizobium medicae WSM419 hypothetical protein YP_001325945.1 274499 D 366394 CDS YP_001325946.1 150395479 5321084 275280..276005 1 NC_009636.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgF 276005 flgF 5321084 flgF Sinorhizobium medicae WSM419 flagellar basal body rod protein FlgF YP_001325946.1 275280 D 366394 CDS YP_001325947.1 150395480 5321085 276048..277451 1 NC_009636.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 277451 fliI 5321085 fliI Sinorhizobium medicae WSM419 flagellum-specific ATP synthase YP_001325947.1 276048 D 366394 CDS YP_001325948.1 150395481 5321086 277454..278026 1 NC_009636.1 KEGG: sme:SMc03026 hypothetical protein; hypothetical protein 278026 5321086 Smed_0254 Sinorhizobium medicae WSM419 hypothetical protein YP_001325948.1 277454 D 366394 CDS YP_001325949.1 150395482 5321087 278152..278532 1 NC_009636.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 278532 flgB 5321087 flgB Sinorhizobium medicae WSM419 flagellar basal body rod protein FlgB YP_001325949.1 278152 D 366394 CDS YP_001325950.1 150395483 5321088 278538..278957 1 NC_009636.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 278957 flgC 5321088 flgC Sinorhizobium medicae WSM419 flagellar basal body rod protein FlgC YP_001325950.1 278538 D 366394 CDS YP_001325951.1 150395484 5321089 278957..279292 1 NC_009636.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE 279292 fliE 5321089 fliE Sinorhizobium medicae WSM419 flagellar hook-basal body protein FliE YP_001325951.1 278957 D 366394 CDS YP_001325952.1 150395485 5321090 279304..280092 1 NC_009636.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 280092 flgG 5321090 flgG Sinorhizobium medicae WSM419 flagellar basal body rod protein FlgG YP_001325952.1 279304 D 366394 CDS YP_001325953.1 150395486 5321091 280111..280620 1 NC_009636.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body P-ring biosynthesis protein FlgA 280620 flgA 5321091 flgA Sinorhizobium medicae WSM419 flagellar basal body P-ring biosynthesis protein FlgA YP_001325953.1 280111 D 366394 CDS YP_001325954.1 150395487 5321092 280617..281732 1 NC_009636.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 281732 flgI 5321092 flgI Sinorhizobium medicae WSM419 flagellar basal body P-ring protein YP_001325954.1 280617 D 366394 CDS YP_001325955.1 150395488 5321093 281729..282268 1 NC_009636.1 KEGG: sme:SMc03033 hypothetical protein; hypothetical protein 282268 5321093 Smed_0261 Sinorhizobium medicae WSM419 hypothetical protein YP_001325955.1 281729 D 366394 CDS YP_001325956.1 150395489 5321094 282265..282975 1 NC_009636.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 282975 flgH 5321094 flgH Sinorhizobium medicae WSM419 flagellar basal body L-ring protein YP_001325956.1 282265 D 366394 CDS YP_001325957.1 150395490 5321095 282992..283483 1 NC_009636.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sme:SMc03035 flagellar transmembrane protein; flagellar basal body-associated protein FliL 283483 5321095 Smed_0263 Sinorhizobium medicae WSM419 flagellar basal body-associated protein FliL YP_001325957.1 282992 D 366394 CDS YP_001325958.1 150395491 5321096 283491..284228 1 NC_009636.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 284228 fliP 5321096 fliP Sinorhizobium medicae WSM419 flagellar biosynthesis protein FliP YP_001325958.1 283491 D 366394 CDS YP_001325959.1 150395492 5321097 284499..285686 1 NC_009636.1 PFAM: flagellin domain protein; KEGG: sme:SMc03037 flagellin A protein; flagellin domain-containing protein 285686 5321097 Smed_0265 Sinorhizobium medicae WSM419 flagellin domain-containing protein YP_001325959.1 284499 D 366394 CDS YP_001325960.1 150395493 5321098 286024..287211 1 NC_009636.1 PFAM: flagellin domain protein; KEGG: sme:SMc03038 flagellin B protein; flagellin domain-containing protein 287211 5321098 Smed_0266 Sinorhizobium medicae WSM419 flagellin domain-containing protein YP_001325960.1 286024 D 366394 CDS YP_001325961.1 150395494 5321099 287475..288662 1 NC_009636.1 PFAM: flagellin domain protein; KEGG: sme:SMc03039 probable flagellin D protein; flagellin domain-containing protein 288662 5321099 Smed_0267 Sinorhizobium medicae WSM419 flagellin domain-containing protein YP_001325961.1 287475 D 366394 CDS YP_001325962.1 150395495 5321100 288963..289928 1 NC_009636.1 PFAM: flagellin domain protein; KEGG: sme:SMc03040 flagellin protein; flagellin domain-containing protein 289928 5321100 Smed_0268 Sinorhizobium medicae WSM419 flagellin domain-containing protein YP_001325962.1 288963 D 366394 CDS YP_001325963.1 150395496 5321101 289969..290274 1 NC_009636.1 hypothetical protein 290274 5321101 Smed_0269 Sinorhizobium medicae WSM419 hypothetical protein YP_001325963.1 289969 D 366394 CDS YP_001325964.1 150395497 5321102 290271..290918 1 NC_009636.1 KEGG: sme:SMc03041 hypothetical protein; hypothetical protein 290918 5321102 Smed_0270 Sinorhizobium medicae WSM419 hypothetical protein YP_001325964.1 290271 D 366394 CDS YP_001325965.1 150395498 5321103 290915..292108 1 NC_009636.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 292108 motB 5321103 motB Sinorhizobium medicae WSM419 flagellar motor protein MotB YP_001325965.1 290915 D 366394 CDS YP_001325966.1 150395499 5321104 292112..293413 1 NC_009636.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 293413 5321104 Smed_0272 Sinorhizobium medicae WSM419 chemotaxis protein YP_001325966.1 292112 D 366394 CDS YP_001325967.1 150395500 5321105 293410..294825 1 NC_009636.1 KEGG: sme:SMc03044 chemotaxis protein (motility protein D); motility protein D 294825 5321105 Smed_0273 Sinorhizobium medicae WSM419 motility protein D YP_001325967.1 293410 D 366394 CDS YP_001325968.1 150395501 5321106 294803..295327 1 NC_009636.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc03045 hypothetical protein; lytic transglycosylase 295327 5321106 Smed_0274 Sinorhizobium medicae WSM419 lytic transglycosylase YP_001325968.1 294803 D 366394 CDS YP_001325969.1 150395502 5321107 295599..296270 1 NC_009636.1 PFAM: transcriptional regulator domain protein; KEGG: sme:SMc03046 putative transcription regulator protein; two component transcriptional regulator 296270 5321107 Smed_0275 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001325969.1 295599 D 366394 CDS YP_001325970.1 150395503 5321108 296360..297568 1 NC_009636.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 297568 flgE 5321108 flgE Sinorhizobium medicae WSM419 flagellar hook protein FlgE YP_001325970.1 296360 D 366394 CDS YP_001325971.1 150395504 5321109 297591..299009 1 NC_009636.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 299009 flgK 5321109 flgK Sinorhizobium medicae WSM419 flagellar hook-associated protein FlgK YP_001325971.1 297591 D 366394 CDS YP_001325972.1 150395505 5321110 299012..300064 1 NC_009636.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 300064 flgL 5321110 flgL Sinorhizobium medicae WSM419 flagellar hook-associated protein FlgL YP_001325972.1 299012 D 366394 CDS YP_001325973.1 150395506 5321111 300102..300449 1 NC_009636.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 300449 flaF 5321111 flaF Sinorhizobium medicae WSM419 flagellar biosynthesis regulatory protein FlaF YP_001325973.1 300102 D 366394 CDS YP_001325974.1 150395507 5321112 300446..300895 1 NC_009636.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 300895 flbT 5321112 flbT Sinorhizobium medicae WSM419 flagellar biosynthesis repressor FlbT YP_001325974.1 300446 D 366394 CDS YP_001325975.1 150395508 5321113 300886..301302 1 NC_009636.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 301302 flgD 5321113 flgD Sinorhizobium medicae WSM419 flagellar basal body rod modification protein YP_001325975.1 300886 D 366394 CDS YP_001325976.1 150395509 5321114 301309..301575 1 NC_009636.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 301575 fliQ 5321114 fliQ Sinorhizobium medicae WSM419 flagellar biosynthesis protein FliQ YP_001325976.1 301309 D 366394 CDS YP_001325977.1 150395510 5321115 301717..303804 1 NC_009636.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 303804 flhA 5321115 flhA Sinorhizobium medicae WSM419 flagellar biosynthesis protein FlhA YP_001325977.1 301717 D 366394 CDS YP_001325978.1 150395511 5321116 303801..304553 1 NC_009636.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 304553 fliR 5321116 fliR Sinorhizobium medicae WSM419 flagellar biosynthesis protein FliR YP_001325978.1 303801 D 366394 CDS YP_001325979.1 150395512 5321117 304558..304971 1 NC_009636.1 KEGG: sme:SMc03056 hypothetical protein; hypothetical protein 304971 5321117 Smed_0285 Sinorhizobium medicae WSM419 hypothetical protein YP_001325979.1 304558 D 366394 CDS YP_001325980.1 150395513 5321118 305070..305621 1 NC_009636.1 KEGG: sme:SMc03071 hypothetical protein; hypothetical protein 305621 5321118 Smed_0286 Sinorhizobium medicae WSM419 hypothetical protein YP_001325980.1 305070 D 366394 CDS YP_001325981.1 150395514 5321119 305787..306155 1 NC_009636.1 KEGG: sme:SMc03072 hypothetical protein; hypothetical protein 306155 5321119 Smed_0287 Sinorhizobium medicae WSM419 hypothetical protein YP_001325981.1 305787 D 366394 CDS YP_001325982.1 150395515 5321120 306155..306724 1 NC_009636.1 KEGG: sme:SMc03057 hypothetical protein; hypothetical protein 306724 5321120 Smed_0288 Sinorhizobium medicae WSM419 hypothetical protein YP_001325982.1 306155 D 366394 CDS YP_001325983.1 150395516 5321121 complement(306770..307759) 1 NC_009636.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMc03058 putative glycosyltransferase protein; glycosyl transferase family protein 307759 5321121 Smed_0289 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001325983.1 306770 R 366394 CDS YP_001325984.1 150395517 5321122 308111..309010 1 NC_009636.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 309010 5321122 Smed_0290 Sinorhizobium medicae WSM419 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001325984.1 308111 D 366394 CDS YP_001325985.1 150395518 5321123 complement(309037..310140) 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMc03060 putative transcription regulator protein; alanine racemase 310140 5321123 Smed_0291 Sinorhizobium medicae WSM419 alanine racemase YP_001325985.1 309037 R 366394 CDS YP_001325986.1 150395519 5321124 310401..311759 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03061 alpha-glucosides-binding periplasmic ABC transporter protein; extracellular solute-binding protein 311759 5321124 Smed_0292 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001325986.1 310401 D 366394 CDS YP_001325987.1 150395520 5321125 311839..312921 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03062 alpha-glucosides transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 312921 5321125 Smed_0293 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001325987.1 311839 D 366394 CDS YP_001325988.1 150395521 5321126 312923..314065 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 314065 5321126 Smed_0294 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001325988.1 312923 D 366394 CDS YP_001325989.1 150395522 5321127 314094..315749 1 NC_009636.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMc03064 probable alpha-glucosidase protein; alpha amylase 315749 5321127 Smed_0295 Sinorhizobium medicae WSM419 alpha amylase YP_001325989.1 314094 D 366394 CDS YP_001325990.1 150395523 5321128 315769..316857 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc03065 alpha-glucosides transport ATP-binding ABC transporter protein; ABC transporter-like protein 316857 5321128 Smed_0296 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001325990.1 315769 D 366394 CDS YP_001325991.1 150395524 5321129 316945..317373 1 NC_009636.1 KEGG: sme:SMc03066 hypothetical unknown protein; hypothetical protein 317373 5321129 Smed_0297 Sinorhizobium medicae WSM419 hypothetical protein YP_001325991.1 316945 D 366394 CDS YP_001325992.1 150395525 5321130 complement(317540..319360) 1 NC_009636.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 319360 5321130 Smed_0298 Sinorhizobium medicae WSM419 phosphogluconate dehydratase YP_001325992.1 317540 R 366394 CDS YP_001325993.1 150395526 5321131 complement(319461..320156) 1 NC_009636.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: sme:SMc03069 6-phosphogluconolactonase protein; 6-phosphogluconolactonase 320156 5321131 Smed_0299 Sinorhizobium medicae WSM419 6-phosphogluconolactonase YP_001325993.1 319461 R 366394 CDS YP_001325994.1 150395527 5321132 complement(320165..321640) 1 NC_009636.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 321640 5321132 Smed_0300 Sinorhizobium medicae WSM419 glucose-6-phosphate 1-dehydrogenase YP_001325994.1 320165 R 366394 CDS YP_001325995.1 150395528 5321133 complement(321846..323156) 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc00761 putative oxidoreductase protein; FAD dependent oxidoreductase 323156 5321133 Smed_0301 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001325995.1 321846 R 366394 CDS YP_001325996.1 150395529 5321134 complement(323149..324585) 1 NC_009636.1 PFAM: glutamine synthetase catalytic region; KEGG: sme:SMc00762 putative glutamine synthetase protein; glutamate--putrescine ligase 324585 5321134 Smed_0302 Sinorhizobium medicae WSM419 glutamate--putrescine ligase YP_001325996.1 323149 R 366394 CDS YP_001325997.1 150395530 5321135 324710..325894 1 NC_009636.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc00763 hypothetical protein; hypothetical protein 325894 5321135 Smed_0303 Sinorhizobium medicae WSM419 hypothetical protein YP_001325997.1 324710 D 366394 CDS YP_001325998.1 150395531 5321136 326166..326306 1 NC_009636.1 KEGG: sme:SMc00764 hypothetical/unknown transmembrane protein; hypothetical protein 326306 5321136 Smed_0304 Sinorhizobium medicae WSM419 hypothetical protein YP_001325998.1 326166 D 366394 CDS YP_001325999.1 150395532 5321137 326610..329135 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sme:SMc00765 probable methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 329135 5321137 Smed_0305 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001325999.1 326610 D 366394 CDS YP_001326000.1 150395533 5321138 329484..330359 1 NC_009636.1 PFAM: regulatory protein LysR; KEGG: sme:SMc00766 putative transcription regulator protein; LysR family transcriptional regulator 330359 5321138 Smed_0306 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326000.1 329484 D 366394 CDS YP_001326001.1 150395534 5321139 complement(330550..330789) 1 NC_009636.1 KEGG: sme:SMc00767 hypothetical protein; hypothetical protein 330789 5321139 Smed_0307 Sinorhizobium medicae WSM419 hypothetical protein YP_001326001.1 330550 R 366394 CDS YP_001326002.1 150395535 5321140 complement(330900..332189) 1 NC_009636.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: sme:SMc00768 isocitrate lyase; isocitrate lyase 332189 5321140 Smed_0308 Sinorhizobium medicae WSM419 isocitrate lyase YP_001326002.1 330900 R 366394 CDS YP_001326003.1 150395536 5321141 332417..333829 1 NC_009636.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: sme:SMc00769 hypothetical protein; hypothetical protein 333829 5321141 Smed_0309 Sinorhizobium medicae WSM419 hypothetical protein YP_001326003.1 332417 D 366394 CDS YP_001326004.1 150395537 5321142 334002..335096 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc00770 probable putrescine-binding periplasmic protein; extracellular solute-binding protein 335096 5321142 Smed_0310 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001326004.1 334002 D 366394 CDS YP_001326005.1 150395538 5321143 335252..336394 1 NC_009636.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc00771 probable putrescine transport ATP-binding protein; spermidine/putrescine ABC transporter ATPase 336394 5321143 Smed_0311 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase YP_001326005.1 335252 D 366394 CDS YP_001326006.1 150395539 5321144 336399..337310 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00772 probable putrescine transport system permease protein; binding-protein-dependent transport system inner membrane protein 337310 5321144 Smed_0312 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326006.1 336399 D 366394 CDS YP_001326007.1 150395540 5321145 337314..338135 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00773 probable putrescine transport system permease protein; ornithine carbamoyltransferase 338135 5321145 Smed_0313 Sinorhizobium medicae WSM419 ornithine carbamoyltransferase YP_001326007.1 337314 D 366394 CDS YP_001326008.1 150395541 5321146 complement(338140..339966) 1 NC_009636.1 PFAM: AsmA family protein; KEGG: sme:SMc00838 hypothetical protein; AsmA family protein 339966 5321146 Smed_0314 Sinorhizobium medicae WSM419 AsmA family protein YP_001326008.1 338140 R 366394 CDS YP_001326009.1 150395542 5321147 340138..342090 1 NC_009636.1 AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase 342090 5321147 Smed_0315 Sinorhizobium medicae WSM419 acetoacetyl-CoA synthetase YP_001326009.1 340138 D 366394 CDS YP_001326010.1 150395543 5321149 complement(342410..344122) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00775 putative iron(III) permease protein; binding-protein-dependent transport system inner membrane protein 344122 5321149 Smed_0317 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326010.1 342410 R 366394 CDS YP_001326011.1 150395544 5321150 complement(344380..347796) 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sme:SMc00776 putative sensor histidine kinase protein; PAS/PAC sensor signal transduction histidine kinase 347796 5321150 Smed_0318 Sinorhizobium medicae WSM419 PAS/PAC sensor signal transduction histidine kinase YP_001326011.1 344380 R 366394 CDS YP_001326012.1 150395545 5321151 348029..348475 1 NC_009636.1 TIGRFAM: phasin; KEGG: sme:SMc00777 hypothetical protein; phasin 348475 5321151 Smed_0319 Sinorhizobium medicae WSM419 phasin YP_001326012.1 348029 D 366394 CDS YP_001326013.1 150395546 5321153 complement(348806..349633) 1 NC_009636.1 PFAM: regulatory protein LuxR; KEGG: pde:Pden_3582 response regulator receiver protein; response regulator receiver protein 349633 5321153 Smed_0320 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001326013.1 348806 R 366394 CDS YP_001326014.1 150395547 5321154 349836..350603 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00778 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 350603 5321154 Smed_0321 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326014.1 349836 D 366394 CDS YP_001326015.1 150395548 5321155 350614..351852 1 NC_009636.1 TIGRFAM: FAD-linked oxidoreductase; PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00779 putative FAD-dependent oxidoreductase protein; FAD-linked oxidoreductase 351852 5321155 Smed_0322 Sinorhizobium medicae WSM419 FAD-linked oxidoreductase YP_001326015.1 350614 D 366394 CDS YP_001326016.1 150395549 5321156 complement(351889..352770) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00780 putative transcription regulator protein; LysR family transcriptional regulator 352770 5321156 Smed_0323 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326016.1 351889 R 366394 CDS YP_001326017.1 150395550 5321157 352885..354381 1 NC_009636.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMc00781 putative malonic semialdehyde oxidative decarboxylase protein; methylmalonate-semialdehyde dehydrogenase 354381 5321157 Smed_0324 Sinorhizobium medicae WSM419 methylmalonate-semialdehyde dehydrogenase YP_001326017.1 352885 D 366394 CDS YP_001326018.1 150395551 5321158 354591..355709 1 NC_009636.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: sme:SMc00782 hypothetical protein; hypothetical protein 355709 5321158 Smed_0325 Sinorhizobium medicae WSM419 hypothetical protein YP_001326018.1 354591 D 366394 CDS YP_001326019.1 150395552 5321159 355699..356760 1 NC_009636.1 PFAM: peptidase M48 Ste24p; KEGG: sme:SMc00783 hypothetical protein; peptidase M48 Ste24p 356760 5321159 Smed_0326 Sinorhizobium medicae WSM419 peptidase M48 Ste24p YP_001326019.1 355699 D 366394 CDS YP_001326020.1 150395553 5321160 complement(356839..357879) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc00784 putative iron binding protein; extracellular solute-binding protein 357879 5321160 Smed_0327 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001326020.1 356839 R 366394 CDS YP_001326021.1 150395554 5321161 358069..358533 1 NC_009636.1 rhizobial iron regulator; in Sinorhizobium meliloti mutations in this gene affect the expression of a number of iron-responsive operons; iron-responsive transcriptional regulator 358533 rirA 5321161 rirA Sinorhizobium medicae WSM419 iron-responsive transcriptional regulator YP_001326021.1 358069 D 366394 CDS YP_001326022.1 150395555 5321162 358968..360563 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc00786 probable periplasmic dipeptide-binding protein; extracellular solute-binding protein 360563 5321162 Smed_0329 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001326022.1 358968 D 366394 CDS YP_001326023.1 150395556 5321163 360668..361672 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00787 probable dipeptide transport system permease protein; nickel-transporting ATPase 361672 5321163 Smed_0330 Sinorhizobium medicae WSM419 nickel-transporting ATPase YP_001326023.1 360668 D 366394 CDS YP_001326024.1 150395557 5321164 361683..362591 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00788 probable dipeptide transport system permease protein; binding-protein-dependent transport system inner membrane protein 362591 5321164 Smed_0331 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326024.1 361683 D 366394 CDS YP_001326025.1 150395558 5321165 362593..363447 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00789 probable dipeptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 363447 5321165 Smed_0332 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326025.1 362593 D 366394 CDS YP_001326026.1 150395559 5321166 363444..364271 1 NC_009636.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc00790 probable dipeptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 364271 5321166 Smed_0333 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326026.1 363444 D 366394 CDS YP_001326027.1 150395560 5321167 364338..364682 1 NC_009636.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc00791 hypothetical protein; endoribonuclease L-PSP 364682 5321167 Smed_0334 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001326027.1 364338 D 366394 CDS YP_001326028.1 150395561 5321168 364834..365004 1 NC_009636.1 KEGG: sme:SMc00792 hypothetical protein; hypothetical protein 365004 5321168 Smed_0335 Sinorhizobium medicae WSM419 hypothetical protein YP_001326028.1 364834 D 366394 CDS YP_001326029.1 150395562 5321169 365106..366236 1 NC_009636.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMc00793 putative permease protein; hypothetical protein 366236 5321169 Smed_0336 Sinorhizobium medicae WSM419 hypothetical protein YP_001326029.1 365106 D 366394 CDS YP_001326030.1 150395563 5321170 complement(366319..367116) 1 NC_009636.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 367116 5321170 Smed_0337 Sinorhizobium medicae WSM419 two-component response regulator YP_001326030.1 366319 R 366394 CDS YP_001326031.1 150395564 5321171 367354..367548 1 NC_009636.1 hypothetical protein 367548 5321171 Smed_0338 Sinorhizobium medicae WSM419 hypothetical protein YP_001326031.1 367354 D 366394 CDS YP_001326032.1 150395565 5321172 complement(367744..367992) 1 NC_009636.1 PFAM: 17 kDa surface antigen; KEGG: sme:SMc00795 hypothetical protein; 17 kDa surface antigen 367992 5321172 Smed_0339 Sinorhizobium medicae WSM419 17 kDa surface antigen YP_001326032.1 367744 R 366394 CDS YP_001326033.1 150395566 5321173 368390..368584 1 NC_009636.1 hypothetical protein 368584 5321173 Smed_0340 Sinorhizobium medicae WSM419 hypothetical protein YP_001326033.1 368390 D 366394 CDS YP_001326034.1 150395567 5321174 368700..368864 1 NC_009636.1 PFAM: protein of unknown function DUF1328; KEGG: sme:SMc00796 hypothetical protein; hypothetical protein 368864 5321174 Smed_0341 Sinorhizobium medicae WSM419 hypothetical protein YP_001326034.1 368700 D 366394 CDS YP_001326035.1 150395568 5321175 369055..370308 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc00797 putative oxidoreductase protein; FAD dependent oxidoreductase 370308 5321175 Smed_0342 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001326035.1 369055 D 366394 CDS YP_001326036.1 150395569 5321176 complement(370334..371293) 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rxy:Rxyl_2603 twin-arginine translocation pathway signal; periplasmic binding protein/LacI transcriptional regulator 371293 5321176 Smed_0343 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001326036.1 370334 R 366394 CDS YP_001326037.1 150395570 5321177 complement(371323..372366) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: msm:MSMEG_1373 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; monosaccharide-transporting ATPase 372366 5321177 Smed_0344 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001326037.1 371323 R 366394 CDS YP_001326038.1 150395571 5321178 complement(372363..373178) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_2601 ABC transporter related; ABC transporter-like protein 373178 5321178 Smed_0345 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326038.1 372363 R 366394 CDS YP_001326039.1 150395572 5321179 complement(373223..374566) 1 NC_009636.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rha:RHA1_ro08464 probable acetylornithine deacetylase; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 374566 5321179 Smed_0346 Sinorhizobium medicae WSM419 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_001326039.1 373223 R 366394 CDS YP_001326040.1 150395573 5321180 375017..375265 1 NC_009636.1 KEGG: sme:SMc00798 hypothetical protein; hypothetical protein 375265 5321180 Smed_0347 Sinorhizobium medicae WSM419 hypothetical protein YP_001326040.1 375017 D 366394 CDS YP_001326041.1 150395574 5321181 complement(375292..375849) 1 NC_009636.1 PFAM: MgtC/SapB transporter; KEGG: sme:SMc00799 hypothetical transmembrane protein; MgtC/SapB transporter 375849 5321181 Smed_0348 Sinorhizobium medicae WSM419 MgtC/SapB transporter YP_001326041.1 375292 R 366394 CDS YP_001326042.1 150395575 5321182 complement(375961..376404) 1 NC_009636.1 KEGG: sme:SMc00800 hypothetical protein; hypothetical protein 376404 5321182 Smed_0349 Sinorhizobium medicae WSM419 hypothetical protein YP_001326042.1 375961 R 366394 CDS YP_001326043.1 150395576 5321183 376714..377373 1 NC_009636.1 KEGG: sme:SMc00801 hypothetical protein; hypothetical protein 377373 5321183 Smed_0350 Sinorhizobium medicae WSM419 hypothetical protein YP_001326043.1 376714 D 366394 CDS YP_001326044.1 150395577 5321184 377410..377850 1 NC_009636.1 KEGG: sme:SMc00802 hypothetical protein; hypothetical protein 377850 5321184 Smed_0351 Sinorhizobium medicae WSM419 hypothetical protein YP_001326044.1 377410 D 366394 CDS YP_001326045.1 150395578 5321185 complement(377865..378104) 1 NC_009636.1 KEGG: rle:RL3128 putative transmembrane protein; putative transmembrane protein 378104 5321185 Smed_0352 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001326045.1 377865 R 366394 CDS YP_001326046.1 150395579 5321186 complement(378111..378878) 1 NC_009636.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: sme:SMc00803 hypothetical protein; hypothetical protein 378878 5321186 Smed_0353 Sinorhizobium medicae WSM419 hypothetical protein YP_001326046.1 378111 R 366394 CDS YP_001326047.1 150395580 5321187 379000..380241 1 NC_009636.1 KEGG: sme:SMc00804 hypothetical protein; hypothetical protein 380241 5321187 Smed_0354 Sinorhizobium medicae WSM419 hypothetical protein YP_001326047.1 379000 D 366394 CDS YP_001326048.1 150395581 5321188 380277..380921 1 NC_009636.1 KEGG: sme:SMc00805 hypothetical protein; hypothetical protein 380921 5321188 Smed_0355 Sinorhizobium medicae WSM419 hypothetical protein YP_001326048.1 380277 D 366394 CDS YP_001326049.1 150395582 5321189 381192..381560 1 NC_009636.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMc00806 hypothetical protein; hypothetical protein 381560 5321189 Smed_0356 Sinorhizobium medicae WSM419 hypothetical protein YP_001326049.1 381192 D 366394 CDS YP_001326050.1 150395583 5321190 complement(381902..382363) 1 NC_009636.1 KEGG: rpd:RPD_2550 hypothetical protein; hypothetical protein 382363 5321190 Smed_0357 Sinorhizobium medicae WSM419 hypothetical protein YP_001326050.1 381902 R 366394 CDS YP_001326051.1 150395584 5321191 382662..383105 1 NC_009636.1 KEGG: saz:Sama_3338 conserved hypothetical protein; S-isoprenylcysteine methyltransferase-like protein 383105 5321191 Smed_0358 Sinorhizobium medicae WSM419 S-isoprenylcysteine methyltransferase-like protein YP_001326051.1 382662 D 366394 CDS YP_001326052.1 150395585 5321192 383109..383690 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: gvi:gll0188 TetR family transcriptional regulatory protein; TetR family transcriptional regulator 383690 5321192 Smed_0359 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001326052.1 383109 D 366394 CDS YP_001326053.1 150395586 5321194 384863..385834 1 NC_009636.1 PFAM: Uncharacterized protein UPF0065; KEGG: pde:Pden_3075 uncharacterized protein UPF0065; hypothetical protein 385834 5321194 Smed_0361 Sinorhizobium medicae WSM419 hypothetical protein YP_001326053.1 384863 D 366394 CDS YP_001326054.1 150395587 5321195 385890..386363 1 NC_009636.1 KEGG: pde:Pden_3074 putative tricarboxylic transport membrane protein; putative tricarboxylic transport membrane protein 386363 5321195 Smed_0362 Sinorhizobium medicae WSM419 putative tricarboxylic transport membrane protein YP_001326054.1 385890 D 366394 CDS YP_001326055.1 150395588 5321196 386374..387873 1 NC_009636.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: pde:Pden_3073 protein of unknown function DUF112, transmembrane; hypothetical protein 387873 5321196 Smed_0363 Sinorhizobium medicae WSM419 hypothetical protein YP_001326055.1 386374 D 366394 CDS YP_001326056.1 150395589 5321197 388023..388841 1 NC_009636.1 PFAM: GntR domain protein; KEGG: pde:Pden_3072 transcriptional regulator, GntR family; GntR family transcriptional regulator 388841 5321197 Smed_0364 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001326056.1 388023 D 366394 CDS YP_001326057.1 150395590 5321198 388975..391593 1 NC_009636.1 catalyzes the conversion of citrate to isocitrate; aconitate hydratase 391593 acnA 5321198 acnA Sinorhizobium medicae WSM419 aconitate hydratase YP_001326057.1 388975 D 366394 CDS YP_001326058.1 150395591 5321199 complement(391945..392841) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1632 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 392841 5321199 Smed_0366 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326058.1 391945 R 366394 CDS YP_001326059.1 150395592 5321200 392937..393257 1 NC_009636.1 KEGG: sme:SMa1630 hypothetical protein; hypothetical protein 393257 5321200 Smed_0367 Sinorhizobium medicae WSM419 hypothetical protein YP_001326059.1 392937 D 366394 CDS YP_001326060.1 150395593 5321201 393257..394036 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sme:SMa1629 short chain dehydrogenase; short chain dehydrogenase 394036 5321201 Smed_0368 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001326060.1 393257 D 366394 CDS YP_001326061.1 150395594 5321202 complement(394056..394523) 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: rle:pRL120291 putative MarR family transcriptional regulator; MarR family transcriptional regulator 394523 5321202 Smed_0369 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001326061.1 394056 R 366394 CDS YP_001326062.1 150395595 5321203 394667..395449 1 NC_009636.1 KEGG: rle:pRL120290 hypothetical protein; hypothetical protein 395449 5321203 Smed_0370 Sinorhizobium medicae WSM419 hypothetical protein YP_001326062.1 394667 D 366394 CDS YP_001326063.1 150395596 5321204 395655..397283 1 NC_009636.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rle:pRL120289 putative choline dehydrogenase; glucose-methanol-choline oxidoreductase 397283 5321204 Smed_0371 Sinorhizobium medicae WSM419 glucose-methanol-choline oxidoreductase YP_001326063.1 395655 D 366394 CDS YP_001326064.1 150395597 5321206 398129..399658 1 NC_009636.1 PFAM: Ppx/GppA phosphatase; KEGG: sme:SMc00810 exopolyphosphatase; Ppx/GppA phosphatase 399658 5321206 Smed_0372 Sinorhizobium medicae WSM419 Ppx/GppA phosphatase YP_001326064.1 398129 D 366394 CDS YP_001326065.1 150395598 5321207 399655..400392 1 NC_009636.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: sme:SMc00811 probable cell division protein; ribosomal RNA methyltransferase RrmJ/FtsJ 400392 5321207 Smed_0373 Sinorhizobium medicae WSM419 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001326065.1 399655 D 366394 CDS YP_001326066.1 150395599 5321208 400396..400779 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00812 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 400779 5321208 Smed_0374 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001326066.1 400396 D 366394 CDS YP_001326067.1 150395600 5321209 complement(401023..401955) 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 401955 5321209 Smed_0375 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001326067.1 401023 R 366394 CDS YP_001326068.1 150395601 5321210 402469..403326 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: rbe:RBE_1274 transposase and inactivated derivative; transposase IS116/IS110/IS902 family protein 403326 5321210 Smed_0376 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001326068.1 402469 D 366394 CDS YP_001326069.1 150395602 5321211 complement(403375..404787) 1 NC_009636.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00813 putative transport transmembrane protein; EmrB/QacA family drug resistance transporter 404787 5321211 Smed_0377 Sinorhizobium medicae WSM419 EmrB/QacA family drug resistance transporter YP_001326069.1 403375 R 366394 CDS YP_001326070.1 150395603 5321212 405136..406116 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00814 hypothetical signal peptide protein; beta-lactamase domain-containing protein 406116 5321212 Smed_0378 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001326070.1 405136 D 366394 CDS YP_001326071.1 150395604 5321213 406307..407809 1 NC_009636.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 407809 5321213 Smed_0379 Sinorhizobium medicae WSM419 inosine 5'-monophosphate dehydrogenase YP_001326071.1 406307 D 366394 CDS YP_001326072.1 150395605 5321214 407887..408303 1 NC_009636.1 PFAM: protein of unknown function DUF1123; KEGG: sme:SMc00816 hypothetical protein; hypothetical protein 408303 5321214 Smed_0380 Sinorhizobium medicae WSM419 hypothetical protein YP_001326072.1 407887 D 366394 CDS YP_001326073.1 150395606 5321215 408389..409264 1 NC_009636.1 PFAM: dienelactone hydrolase; KEGG: sme:SMc00817 putative carboxymethylenebutenolidase (dienelactone hydrolase) protein; carboxymethylenebutenolidase 409264 5321215 Smed_0381 Sinorhizobium medicae WSM419 carboxymethylenebutenolidase YP_001326073.1 408389 D 366394 CDS YP_001326074.1 150395607 5321216 complement(409265..410218) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00818 putative hydrogen peroxide-inducible genes activator (morphology and auto-aggregation control protein).; LysR family transcriptional regulator 410218 5321216 Smed_0382 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326074.1 409265 R 366394 CDS YP_001326075.1 150395608 5321217 410335..411819 1 NC_009636.1 PFAM: Catalase domain protein; KEGG: sme:SMc00819 catalase hydroperoxidase HPII(III) protein; catalase 411819 5321217 Smed_0383 Sinorhizobium medicae WSM419 catalase YP_001326075.1 410335 D 366394 CDS YP_001326076.1 150395609 5321218 complement(411903..412853) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00820 putative transcriptional regulator protein; LysR family transcriptional regulator 412853 5321218 Smed_0384 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326076.1 411903 R 366394 CDS YP_001326077.1 150395610 5321219 413060..413356 1 NC_009636.1 KEGG: sme:SMc00821 hypothetical protein; hypothetical protein 413356 5321219 Smed_0385 Sinorhizobium medicae WSM419 hypothetical protein YP_001326077.1 413060 D 366394 CDS YP_001326078.1 150395611 5321220 complement(413660..414505) 1 NC_009636.1 KEGG: sme:SMc00824 hypothetical protein; hypothetical protein 414505 5321220 Smed_0386 Sinorhizobium medicae WSM419 hypothetical protein YP_001326078.1 413660 R 366394 CDS YP_001326079.1 150395612 5321221 complement(414615..415988) 1 NC_009636.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; KEGG: sme:SMc00825 putative glutamate--cysteine ligase precursor protein; glutamate--cysteine ligase 415988 5321221 Smed_0387 Sinorhizobium medicae WSM419 glutamate--cysteine ligase YP_001326079.1 414615 R 366394 CDS YP_001326080.1 150395613 5321222 complement(416148..416885) 1 NC_009636.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 416885 5321222 Smed_0388 Sinorhizobium medicae WSM419 16S ribosomal RNA methyltransferase RsmE YP_001326080.1 416148 R 366394 CDS YP_001326081.1 150395614 5321223 complement(416904..418409) 1 NC_009636.1 PFAM: phosphate transporter; KEGG: sme:SMc00827 putative transport transmembrane protein; phosphate transporter 418409 5321223 Smed_0389 Sinorhizobium medicae WSM419 phosphate transporter YP_001326081.1 416904 R 366394 CDS YP_001326082.1 150395615 5321224 complement(418612..419118) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc00828 hypothetical protein; NUDIX hydrolase 419118 5321224 Smed_0390 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001326082.1 418612 R 366394 CDS YP_001326083.1 150395616 5321225 complement(419392..420249) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc00829 putative transcription regulator protein; GntR family transcriptional regulator 420249 5321225 Smed_0391 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001326083.1 419392 R 366394 CDS YP_001326084.1 150395617 5321226 420394..421662 1 NC_009636.1 KEGG: sme:SMc00830 hypothetical protein; hypothetical protein 421662 5321226 Smed_0392 Sinorhizobium medicae WSM419 hypothetical protein YP_001326084.1 420394 D 366394 CDS YP_001326085.1 150395618 5321227 complement(421682..422578) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00831 hypothetical transcription regulator protein; LysR family transcriptional regulator 422578 5321227 Smed_0393 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326085.1 421682 R 366394 CDS YP_001326086.1 150395619 5321228 422685..424124 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00832 probable glycolate oxidase subunit protein; D-lactate dehydrogenase 424124 5321228 Smed_0394 Sinorhizobium medicae WSM419 D-lactate dehydrogenase YP_001326086.1 422685 D 366394 CDS YP_001326087.1 150395620 5321229 424121..425338 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00833 probable glycolate oxidase subunit protein; FAD linked oxidase domain-containing protein 425338 5321229 Smed_0395 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001326087.1 424121 D 366394 CDS YP_001326088.1 150395621 5321230 425463..426755 1 NC_009636.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sme:SMc00926 probable glycolate oxidase iron-sulfur subunit protein; hypothetical protein 426755 5321230 Smed_0396 Sinorhizobium medicae WSM419 hypothetical protein YP_001326088.1 425463 D 366394 CDS YP_001326089.1 150395622 5321231 complement(426880..427566) 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc00925 putative signal peptide protein; ErfK/YbiS/YcfS/YnhG family protein 427566 5321231 Smed_0397 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001326089.1 426880 R 366394 CDS YP_001326090.1 150395623 5321232 complement(427756..428496) 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc00924 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 428496 5321232 Smed_0398 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001326090.1 427756 R 366394 CDS YP_001326091.1 150395624 5321233 428776..429411 1 NC_009636.1 PFAM: methyladenine glycosylase; KEGG: sme:SMc00923 probable DNA-3-methyladenine glycosylase I protein; DNA-3-methyladenine glycosylase I 429411 5321233 Smed_0399 Sinorhizobium medicae WSM419 DNA-3-methyladenine glycosylase I YP_001326091.1 428776 D 366394 CDS YP_001326092.1 150395625 5321234 complement(429481..430932) 1 NC_009636.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sme:SMc00922 putative transporter transmembrane protein; cytosine/purines uracil thiamine allantoin permease 430932 5321234 Smed_0400 Sinorhizobium medicae WSM419 cytosine/purines uracil thiamine allantoin permease YP_001326092.1 429481 R 366394 CDS YP_001326093.1 150395626 5321235 complement(431188..431568) 1 NC_009636.1 PFAM: protein of unknown function DUF305; KEGG: sme:SMc00921 hypothetical signal peptide protein; hypothetical protein 431568 5321235 Smed_0401 Sinorhizobium medicae WSM419 hypothetical protein YP_001326093.1 431188 R 366394 CDS YP_001326094.1 150395627 5321236 complement(432104..432529) 1 NC_009636.1 KEGG: sme:SMc00931 hypothetical/unknown protein; hypothetical protein 432529 5321236 Smed_0402 Sinorhizobium medicae WSM419 hypothetical protein YP_001326094.1 432104 R 366394 CDS YP_001326095.1 150395628 5321237 432749..434272 1 NC_009636.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 434272 hisS 5321237 hisS Sinorhizobium medicae WSM419 histidyl-tRNA synthetase YP_001326095.1 432749 D 366394 CDS YP_001326096.1 150395629 5321238 434278..435411 1 NC_009636.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 435411 hisZ 5321238 hisZ Sinorhizobium medicae WSM419 ATP phosphoribosyltransferase regulatory subunit YP_001326096.1 434278 D 366394 CDS YP_001326097.1 150395630 5321239 435408..436103 1 NC_009636.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 436103 hisG 5321239 hisG Sinorhizobium medicae WSM419 ATP phosphoribosyltransferase catalytic subunit YP_001326097.1 435408 D 366394 CDS YP_001326098.1 150395631 5321240 436224..436931 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: rle:RL0881 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 436931 5321240 Smed_0406 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326098.1 436224 D 366394 CDS YP_001326099.1 150395632 5321241 436959..438239 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc00914 putative oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 438239 5321241 Smed_0407 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001326099.1 436959 D 366394 CDS YP_001326100.1 150395633 5321242 complement(438560..440197) 1 NC_009636.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL 440197 groEL 5321242 groEL Sinorhizobium medicae WSM419 chaperonin GroEL YP_001326100.1 438560 R 366394 CDS YP_001326101.1 150395634 5321243 complement(440275..440571) 1 NC_009636.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 440571 groES 5321243 groES Sinorhizobium medicae WSM419 co-chaperonin GroES YP_001326101.1 440275 R 366394 CDS YP_001326102.1 150395635 5321244 440876..441724 1 NC_009636.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00910 hypothetical protein; HAD family hydrolase 441724 5321244 Smed_0410 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001326102.1 440876 D 366394 CDS YP_001326103.1 150395636 5321245 441738..442721 1 NC_009636.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 442721 5321245 Smed_0411 Sinorhizobium medicae WSM419 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001326103.1 441738 D 366394 CDS YP_001326104.1 150395637 5321246 443003..445912 1 NC_009636.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 445912 ileS 5321246 ileS Sinorhizobium medicae WSM419 isoleucyl-tRNA synthetase YP_001326104.1 443003 D 366394 CDS YP_001326105.1 150395638 5321247 446046..446666 1 NC_009636.1 KEGG: sme:SMc00907 hypothetical protein; hypothetical protein 446666 5321247 Smed_0413 Sinorhizobium medicae WSM419 hypothetical protein YP_001326105.1 446046 D 366394 CDS YP_001326106.1 150395639 5321248 446739..447218 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00906 putative acetyltransferase protein; N-acetyltransferase GCN5 447218 5321248 Smed_0414 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326106.1 446739 D 366394 CDS YP_001326107.1 150395640 5321249 complement(447715..448164) 1 NC_009636.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sme:SMc00905 putative deaminase protein; zinc-binding CMP/dCMP deaminase 448164 5321249 Smed_0415 Sinorhizobium medicae WSM419 zinc-binding CMP/dCMP deaminase YP_001326107.1 447715 R 366394 CDS YP_001326108.1 150395641 5321250 448238..449968 1 NC_009636.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sme:SMc00904 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 449968 5321250 Smed_0416 Sinorhizobium medicae WSM419 pseudouridine synthase YP_001326108.1 448238 D 366394 CDS YP_001326109.1 150395642 5321251 449975..450535 1 NC_009636.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: sme:SMc00902 hypothetical protein; putative methyltransferase 450535 5321251 Smed_0417 Sinorhizobium medicae WSM419 putative methyltransferase YP_001326109.1 449975 D 366394 CDS YP_001326110.1 150395643 5321252 450625..451509 1 NC_009636.1 PFAM: Patatin; KEGG: sme:SMc00930 hypothetical transmembrane protein; patatin 451509 5321252 Smed_0418 Sinorhizobium medicae WSM419 patatin YP_001326110.1 450625 D 366394 CDS YP_001326111.1 150395644 5321253 complement(451719..452396) 1 NC_009636.1 PFAM: porin; KEGG: mlo:mlr0810 outer membrane protein; porin 452396 5321253 Smed_0419 Sinorhizobium medicae WSM419 porin YP_001326111.1 451719 R 366394 CDS YP_001326112.1 150395645 5321254 complement(452990..454855) 1 NC_009636.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sme:SMc00898 probable glutathione-regulated potassium-efflux system transmembrane protein; potassium efflux system protein 454855 5321254 Smed_0420 Sinorhizobium medicae WSM419 potassium efflux system protein YP_001326112.1 452990 R 366394 CDS YP_001326113.1 150395646 5321255 454976..456322 1 NC_009636.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sme:SMc00897 PmbA protein; peptidase U62 modulator of DNA gyrase 456322 5321255 Smed_0421 Sinorhizobium medicae WSM419 peptidase U62 modulator of DNA gyrase YP_001326113.1 454976 D 366394 CDS YP_001326114.1 150395647 5321256 456479..457297 1 NC_009636.1 PFAM: inositol monophosphatase; KEGG: sme:SMc00896 putative sulfite biosynthesis protein; inositol monophosphatase 457297 5321256 Smed_0422 Sinorhizobium medicae WSM419 inositol monophosphatase YP_001326114.1 456479 D 366394 CDS YP_001326115.1 150395648 5321257 457358..457594 1 NC_009636.1 KEGG: sme:SMc00895 hypothetical protein; hypothetical protein 457594 5321257 Smed_0423 Sinorhizobium medicae WSM419 hypothetical protein YP_001326115.1 457358 D 366394 CDS YP_001326116.1 150395649 5321258 457632..458951 1 NC_009636.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 458951 5321258 Smed_0424 Sinorhizobium medicae WSM419 3-deoxy-D-manno-octulosonic-acid transferase YP_001326116.1 457632 D 366394 CDS YP_001326117.1 150395650 5321259 458976..459677 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00893 putative phosphoglycolate phosphatase; HAD family hydrolase 459677 5321259 Smed_0425 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001326117.1 458976 D 366394 CDS YP_001326118.1 150395651 5321260 459818..460858 1 NC_009636.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 460858 lpxK 5321260 lpxK Sinorhizobium medicae WSM419 tetraacyldisaccharide 4'-kinase YP_001326118.1 459818 D 366394 CDS YP_001326119.1 150395652 5321261 complement(460962..461195) 1 NC_009636.1 KEGG: sme:SMc00933 hypothetical protein; hypothetical protein 461195 5321261 Smed_0427 Sinorhizobium medicae WSM419 hypothetical protein YP_001326119.1 460962 R 366394 CDS YP_001326120.1 150395653 5321262 complement(461286..463103) 1 NC_009636.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 463103 mutL 5321262 mutL Sinorhizobium medicae WSM419 DNA mismatch repair protein YP_001326120.1 461286 R 366394 CDS YP_001326121.1 150395654 5321263 463541..465280 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sme:SMc00888 putative contains A 2-component receiver domain protein; putative PAS/PAC sensor protein 465280 5321263 Smed_0429 Sinorhizobium medicae WSM419 putative PAS/PAC sensor protein YP_001326121.1 463541 D 366394 CDS YP_001326122.1 150395655 5321264 465277..466626 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sme:SMc00887 hypothetical protein; diguanylate cyclase/phosphodiesterase 466626 5321264 Smed_0430 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001326122.1 465277 D 366394 CDS YP_001326123.1 150395656 5321265 complement(466599..467582) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00929 putative transcription regulator protein; LysR family transcriptional regulator 467582 5321265 Smed_0431 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326123.1 466599 R 366394 CDS YP_001326124.1 150395657 5321266 467665..469209 1 NC_009636.1 PFAM: trimethylamine methyltransferase; KEGG: sme:SMc00886 hypothetical protein; trimethylamine methyltransferase 469209 5321266 Smed_0432 Sinorhizobium medicae WSM419 trimethylamine methyltransferase YP_001326124.1 467665 D 366394 CDS YP_001326125.1 150395658 5321267 complement(469319..469957) 1 NC_009636.1 PFAM: PRC-barrel domain protein; KEGG: sme:SMc00885 hypothetical transmembrane signal peptide protein; PRC-barrel domain-containing protein 469957 5321267 Smed_0433 Sinorhizobium medicae WSM419 PRC-barrel domain-containing protein YP_001326125.1 469319 R 366394 CDS YP_001326126.1 150395659 5321268 complement(470311..472035) 1 NC_009636.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 472035 5321268 Smed_0434 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001326126.1 470311 R 366394 CDS YP_001326127.1 150395660 5321269 complement(472192..473076) 1 NC_009636.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMc00883 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein 473076 5321269 Smed_0435 Sinorhizobium medicae WSM419 SMP-30/gluconolaconase/LRE domain-containing protein YP_001326127.1 472192 R 366394 CDS YP_001326128.1 150395661 5321270 complement(473073..473711) 1 NC_009636.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 473711 5321270 Smed_0436 Sinorhizobium medicae WSM419 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_001326128.1 473073 R 366394 CDS YP_001326129.1 150395662 5321271 complement(473726..474646) 1 NC_009636.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: sme:SMc00881 putative 2-dehydro-3-deoxygalactonokinase protein; 2-keto-3-deoxy-galactonokinase 474646 5321271 Smed_0437 Sinorhizobium medicae WSM419 2-keto-3-deoxy-galactonokinase YP_001326129.1 473726 R 366394 CDS YP_001326130.1 150395663 5321272 complement(474643..475413) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc00880 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 475413 5321272 Smed_0438 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326130.1 474643 R 366394 CDS YP_001326131.1 150395664 5321273 475534..476394 1 NC_009636.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMc00879 putative transcription regulator protein; transcriptional regulator IclR 476394 5321273 Smed_0439 Sinorhizobium medicae WSM419 transcriptional regulator IclR YP_001326131.1 475534 D 366394 CDS YP_001326132.1 150395665 5321274 476654..477394 1 NC_009636.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sme:SMc00878 putative transcription regulator protein; regulatory protein LuxR 477394 5321274 Smed_0440 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001326132.1 476654 D 366394 CDS YP_001326133.1 150395666 5321275 477535..478395 1 NC_009636.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sme:SMc00877 putative transcription regulator protein; regulatory protein LuxR 478395 5321275 Smed_0441 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001326133.1 477535 D 366394 CDS YP_001326134.1 150395667 5321276 478800..479954 1 NC_009636.1 PFAM: protein of unknown function DUF59; KEGG: sme:SMc00876 putative MRP protein homolog ATP-binding; hypothetical protein 479954 5321276 Smed_0442 Sinorhizobium medicae WSM419 hypothetical protein YP_001326134.1 478800 D 366394 CDS YP_001326135.1 150395668 5321277 480223..481200 1 NC_009636.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: sme:SMc00874 probable magnesium and cobalt transport transmembrane protein; magnesium and cobalt transport protein CorA 481200 5321277 Smed_0443 Sinorhizobium medicae WSM419 magnesium and cobalt transport protein CorA YP_001326135.1 480223 D 366394 CDS YP_001326136.1 150395669 5321278 481216..483108 1 NC_009636.1 PFAM: K potassium transporter; KEGG: sme:SMc00873 probable KUP system potassium uptake transmembrane protein; K potassium transporter 483108 5321278 Smed_0444 Sinorhizobium medicae WSM419 K potassium transporter YP_001326136.1 481216 D 366394 CDS YP_001326137.1 150395670 5321279 483327..484502 1 NC_009636.1 PFAM: cell wall hydrolase SleB; KEGG: sme:SMc00928 hypothetical signal peptide protein; cell wall hydrolase SleB 484502 5321279 Smed_0445 Sinorhizobium medicae WSM419 cell wall hydrolase SleB YP_001326137.1 483327 D 366394 CDS YP_001326138.1 150395671 5321280 484789..485148 1 NC_009636.1 KEGG: sme:SMc00872 putative FOF1 ATP synthase, subunit I transmembrane protein; putative FOF1 ATP synthase subunit I transmembrane protein 485148 5321280 Smed_0446 Sinorhizobium medicae WSM419 putative FOF1 ATP synthase subunit I transmembrane protein YP_001326138.1 484789 D 366394 CDS YP_001326139.1 150395672 5321281 485209..485961 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 485961 5321281 Smed_0447 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit A YP_001326139.1 485209 D 366394 CDS YP_001326140.1 150395673 5321282 486043..486270 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 486270 5321282 Smed_0448 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit C YP_001326140.1 486043 D 366394 CDS YP_001326141.1 150395674 5321283 486345..486959 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 486959 5321283 Smed_0449 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit B' YP_001326141.1 486345 D 366394 CDS YP_001326142.1 150395675 5321284 486973..487458 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 487458 5321284 Smed_0450 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit B YP_001326142.1 486973 D 366394 CDS YP_001326143.1 150395676 5321285 complement(487716..488366) 1 NC_009636.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 488366 rnhB 5321285 rnhB Sinorhizobium medicae WSM419 ribonuclease HII YP_001326143.1 487716 R 366394 CDS YP_001326144.1 150395677 5321286 complement(488506..489663) 1 NC_009636.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sme:SMc00866 hypothetical protein; radical SAM domain-containing protein 489663 5321286 Smed_0452 Sinorhizobium medicae WSM419 radical SAM domain-containing protein YP_001326144.1 488506 R 366394 CDS YP_001326145.1 150395678 5321287 489944..490492 1 NC_009636.1 KEGG: sme:SMc00865 hypothetical protein; hypothetical protein 490492 5321287 Smed_0453 Sinorhizobium medicae WSM419 hypothetical protein YP_001326145.1 489944 D 366394 CDS YP_001326146.1 150395679 5321288 complement(490540..491619) 1 NC_009636.1 KEGG: sme:SMc00864 hypothetical/unknown protein; hypothetical protein 491619 5321288 Smed_0454 Sinorhizobium medicae WSM419 hypothetical protein YP_001326146.1 490540 R 366394 CDS YP_001326147.1 150395680 5321289 complement(492069..492611) 1 NC_009636.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: sme:SMc00863 probable molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 492611 5321289 Smed_0455 Sinorhizobium medicae WSM419 molybdenum cofactor biosynthesis protein B YP_001326147.1 492069 R 366394 CDS YP_001326148.1 150395681 5321290 complement(492620..493531) 1 NC_009636.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 493531 5321290 Smed_0456 Sinorhizobium medicae WSM419 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001326148.1 492620 R 366394 CDS YP_001326149.1 150395682 5321291 complement(493538..495361) 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc00861 hypothetical signal peptide protein; hypothetical protein 495361 5321291 Smed_0457 Sinorhizobium medicae WSM419 hypothetical protein YP_001326149.1 493538 R 366394 CDS YP_001326150.1 150395683 5321292 complement(495559..496575) 1 NC_009636.1 PFAM: Polyprenyl synthetase; KEGG: sme:SMc00860 putative octaprenyl-diphosphate synthase protein; polyprenyl synthetase 496575 5321292 Smed_0458 Sinorhizobium medicae WSM419 polyprenyl synthetase YP_001326150.1 495559 R 366394 CDS YP_001326151.1 150395684 5321293 496684..496905 1 NC_009636.1 KEGG: sme:SMc00859 hypothetical/unknown protein; hypothetical protein 496905 5321293 Smed_0459 Sinorhizobium medicae WSM419 hypothetical protein YP_001326151.1 496684 D 366394 CDS YP_001326152.1 150395685 5321294 496940..497710 1 NC_009636.1 PFAM: methyltransferase small; KEGG: sme:SMc00858 hypothetical protein; methyltransferase small 497710 5321294 Smed_0460 Sinorhizobium medicae WSM419 methyltransferase small YP_001326152.1 496940 D 366394 CDS YP_001326153.1 150395686 5321295 497790..498656 1 NC_009636.1 PFAM: peptidase S49; KEGG: sme:SMc00857 putative protease protein; peptidase S49 498656 5321295 Smed_0461 Sinorhizobium medicae WSM419 peptidase S49 YP_001326153.1 497790 D 366394 CDS YP_001326154.1 150395687 5321296 498803..498994 1 NC_009636.1 KEGG: sme:SMc00856 hypothetical protein; hypothetical protein 498994 5321296 Smed_0462 Sinorhizobium medicae WSM419 hypothetical protein YP_001326154.1 498803 D 366394 CDS YP_001326155.1 150395688 5321297 499081..500043 1 NC_009636.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 500043 glyQ 5321297 glyQ Sinorhizobium medicae WSM419 glycyl-tRNA synthetase subunit alpha YP_001326155.1 499081 D 366394 CDS YP_001326156.1 150395689 5321298 500507..501055 1 NC_009636.1 PFAM: LemA family protein; KEGG: sme:SMc00853 hypothetical transmembrane protein; LemA family protein 501055 5321298 Smed_0464 Sinorhizobium medicae WSM419 LemA family protein YP_001326156.1 500507 D 366394 CDS YP_001326157.1 150395690 5321299 501166..503100 1 NC_009636.1 KEGG: sme:SMc00852 hypothetical transmembrane signal peptide protein; putative transmembrane signal peptide protein 503100 5321299 Smed_0465 Sinorhizobium medicae WSM419 putative transmembrane signal peptide protein YP_001326157.1 501166 D 366394 CDS YP_001326158.1 150395691 5321300 503291..505456 1 NC_009636.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 505456 glyS 5321300 glyS Sinorhizobium medicae WSM419 glycyl-tRNA synthetase subunit beta YP_001326158.1 503291 D 366394 CDS YP_001326159.1 150395692 5321301 505520..506005 1 NC_009636.1 PFAM: protein of unknown function DUF523; KEGG: sme:SMc00850 hypothetical protein; hypothetical protein 506005 5321301 Smed_0467 Sinorhizobium medicae WSM419 hypothetical protein YP_001326159.1 505520 D 366394 CDS YP_001326160.1 150395693 5321302 506137..506394 1 NC_009636.1 KEGG: vei:Veis_3475 plasmid stability protein StbC; plasmid stability protein StbC 506394 5321302 Smed_0468 Sinorhizobium medicae WSM419 plasmid stability protein StbC YP_001326160.1 506137 D 366394 CDS YP_001326161.1 150395694 5321303 506391..506816 1 NC_009636.1 PFAM: PilT protein domain protein; KEGG: vei:Veis_3474 PilT protein domain protein; PilT domain-containing protein 506816 5321303 Smed_0469 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001326161.1 506391 D 366394 CDS YP_001326162.1 150395695 5321304 complement(506977..507483) 1 NC_009636.1 KEGG: sme:SMc00849 hypothetical protein; hypothetical protein 507483 5321304 Smed_0470 Sinorhizobium medicae WSM419 hypothetical protein YP_001326162.1 506977 R 366394 CDS YP_001326163.1 150395696 5321305 complement(507600..508871) 1 NC_009636.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 508871 5321305 Smed_0471 Sinorhizobium medicae WSM419 phosphoribosylamine--glycine ligase YP_001326163.1 507600 R 366394 CDS YP_001326164.1 150395697 5321306 complement(508946..511174) 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sme:SMc00992 hypothetical protein; diguanylate cyclase/phosphodiesterase 511174 5321306 Smed_0472 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001326164.1 508946 R 366394 CDS YP_001326165.1 150395698 5321307 complement(511313..512350) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc00991 putative putrescine-binding periplasmic protein; extracellular solute-binding protein 512350 5321307 Smed_0473 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001326165.1 511313 R 366394 CDS YP_001326166.1 150395699 5321308 complement(512451..513647) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00990 putative fosmidomycin resistance antibiotic resistance transmembrane protein; major facilitator superfamily transporter 513647 5321308 Smed_0474 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326166.1 512451 R 366394 CDS YP_001326167.1 150395700 5321309 513759..514574 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00994 putative transcription regulator protein; AraC family transcriptional regulator 514574 5321309 Smed_0475 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001326167.1 513759 D 366394 CDS YP_001326168.1 150395701 5321310 514953..515759 1 NC_009636.1 PFAM: MltA-interacting MipA family protein; KEGG: sme:SMc00989 hypothetical signal peptide protein; MltA-interacting MipA family protein 515759 5321310 Smed_0476 Sinorhizobium medicae WSM419 MltA-interacting MipA family protein YP_001326168.1 514953 D 366394 CDS YP_001326169.1 150395702 5321311 515828..516793 1 NC_009636.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 516793 ubiA 5321311 ubiA Sinorhizobium medicae WSM419 4-hydroxybenzoate polyprenyltransferase YP_001326169.1 515828 D 366394 CDS YP_001326170.1 150395703 5321312 complement(517158..517724) 1 NC_009636.1 KEGG: sme:SMc00987 hypothetical protein; hypothetical protein 517724 5321312 Smed_0478 Sinorhizobium medicae WSM419 hypothetical protein YP_001326170.1 517158 R 366394 CDS YP_001326171.1 150395704 5321313 517934..520402 1 NC_009636.1 PFAM: protein of unknown function DUF1217; KEGG: sme:SMc00986 hypothetical protein; hypothetical protein 520402 5321313 Smed_0479 Sinorhizobium medicae WSM419 hypothetical protein YP_001326171.1 517934 D 366394 CDS YP_001326172.1 150395705 5321314 complement(520440..521873) 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc00985 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 521873 5321314 Smed_0480 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001326172.1 520440 R 366394 CDS YP_001326173.1 150395706 5321315 complement(521921..522895) 1 NC_009636.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: sme:SMc00984 putative translation factor; Sua5/YciO/YrdC/YwlC family protein 522895 5321315 Smed_0481 Sinorhizobium medicae WSM419 Sua5/YciO/YrdC/YwlC family protein YP_001326173.1 521921 R 366394 CDS YP_001326174.1 150395707 5321316 complement(522993..523589) 1 NC_009636.1 KEGG: sme:SMc00983 hypothetical/unknown protein; hypothetical protein 523589 5321316 Smed_0482 Sinorhizobium medicae WSM419 hypothetical protein YP_001326174.1 522993 R 366394 CDS YP_001326175.1 150395708 5321317 524224..525468 1 NC_009636.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMc00982 putative dioxygenase protein; Rieske (2Fe-2S) domain-containing protein 525468 5321317 Smed_0483 Sinorhizobium medicae WSM419 Rieske (2Fe-2S) domain-containing protein YP_001326175.1 524224 D 366394 CDS YP_001326176.1 150395709 5321318 525471..526565 1 NC_009636.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMc00981 putative ferredoxin protein; ferredoxin 526565 5321318 Smed_0484 Sinorhizobium medicae WSM419 ferredoxin YP_001326176.1 525471 D 366394 CDS YP_001326177.1 150395710 5321319 complement(526567..527787) 1 NC_009636.1 PFAM: glycoside hydrolase family 25; KEGG: sme:SMc00980 hypothetical protein; glycoside hydrolase 527787 5321319 Smed_0485 Sinorhizobium medicae WSM419 glycoside hydrolase YP_001326177.1 526567 R 366394 CDS YP_001326178.1 150395711 5321320 527886..528299 1 NC_009636.1 PFAM: BA14K family protein; KEGG: sme:SMc00979 hypothetical protein; BA14K family protein 528299 5321320 Smed_0486 Sinorhizobium medicae WSM419 BA14K family protein YP_001326178.1 527886 D 366394 CDS YP_001326179.1 150395712 5321321 528649..530430 1 NC_009636.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMc00977 putative acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 530430 5321321 Smed_0487 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001326179.1 528649 D 366394 CDS YP_001326180.1 150395713 5321322 530441..531193 1 NC_009636.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 531193 5321322 Smed_0488 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001326180.1 530441 D 366394 CDS YP_001326181.1 150395714 5321323 531702..533798 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sme:SMc00975 probable chemoreceptor (methyl-accepting chemotaxis) transmembrane protein; methyl-accepting chemotaxis sensory transducer 533798 5321323 Smed_0489 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001326181.1 531702 D 366394 CDS YP_001326182.1 150395715 5321324 complement(533878..535140) 1 NC_009636.1 PFAM: (Uracil-5)-methyltransferase; KEGG: sme:SMc00974 putative RNA methyltransferase protein; (uracil-5)-methyltransferase 535140 5321324 Smed_0490 Sinorhizobium medicae WSM419 (uracil-5)-methyltransferase YP_001326182.1 533878 R 366394 CDS YP_001326183.1 150395716 5321325 complement(535137..535892) 1 NC_009636.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: sme:SMc00973 putative hemolysin; hemolysin A 535892 5321325 Smed_0491 Sinorhizobium medicae WSM419 hemolysin A YP_001326183.1 535137 R 366394 CDS YP_001326184.1 150395717 5321326 complement(536006..537919) 1 NC_009636.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 537919 5321326 Smed_0492 Sinorhizobium medicae WSM419 1-deoxy-D-xylulose-5-phosphate synthase YP_001326184.1 536006 R 366394 CDS YP_001326185.1 150395718 5321327 complement(538133..539056) 1 NC_009636.1 PFAM: Pirin domain protein; KEGG: sme:SMc00971 hypothetical protein; pirin domain-containing protein 539056 5321327 Smed_0493 Sinorhizobium medicae WSM419 pirin domain-containing protein YP_001326185.1 538133 R 366394 CDS YP_001326186.1 150395719 5321329 complement(539445..539696) 1 NC_009636.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 539696 5321329 Smed_0495 Sinorhizobium medicae WSM419 exodeoxyribonuclease VII small subunit YP_001326186.1 539445 R 366394 CDS YP_001326187.1 150395720 5321330 complement(539700..540629) 1 NC_009636.1 PFAM: histone deacetylase superfamily; KEGG: sme:SMc00969 hypothetical protein; histone deacetylase superfamily protein 540629 5321330 Smed_0496 Sinorhizobium medicae WSM419 histone deacetylase superfamily protein YP_001326187.1 539700 R 366394 CDS YP_001326188.1 150395721 5321331 complement(540693..541661) 1 NC_009636.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc00968 putative oxidoreductase protein; alcohol dehydrogenase 541661 5321331 Smed_0497 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001326188.1 540693 R 366394 CDS YP_001326189.1 150395722 5321332 541675..542076 1 NC_009636.1 PFAM: thioesterase superfamily protein; KEGG: sme:SMc00967 hypothetical protein; thioesterase superfamily protein 542076 5321332 Smed_0498 Sinorhizobium medicae WSM419 thioesterase superfamily protein YP_001326189.1 541675 D 366394 CDS YP_001326190.1 150395723 5321333 complement(542064..543257) 1 NC_009636.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sme:SMc00966 putative acetyl-CoA acyltransferase protein; acetyl-CoA acetyltransferase 543257 5321333 Smed_0499 Sinorhizobium medicae WSM419 acetyl-CoA acetyltransferase YP_001326190.1 542064 R 366394 CDS YP_001326191.1 150395724 5321334 complement(543241..544737) 1 NC_009636.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMc00965 hypothetical protein; AMP-dependent synthetase and ligase 544737 5321334 Smed_0500 Sinorhizobium medicae WSM419 AMP-dependent synthetase and ligase YP_001326191.1 543241 R 366394 CDS YP_001326192.1 150395725 5321335 complement(544742..545305) 1 NC_009636.1 PFAM: BioY protein; KEGG: sme:SMc00964 hypothetical transmembrane protein; BioY protein 545305 5321335 Smed_0501 Sinorhizobium medicae WSM419 BioY protein YP_001326192.1 544742 R 366394 CDS YP_001326193.1 150395726 5321336 complement(545337..545942) 1 NC_009636.1 PFAM: cobalt transport protein; KEGG: sme:SMc00963 hypothetical transmembrane protein; cobalt transport protein 545942 5321336 Smed_0502 Sinorhizobium medicae WSM419 cobalt transport protein YP_001326193.1 545337 R 366394 CDS YP_001326194.1 150395727 5321337 complement(545936..546616) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00962 putative ATP-binding ABC transporter protein; ABC transporter-like protein 546616 5321337 Smed_0503 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326194.1 545936 R 366394 CDS YP_001326195.1 150395728 5321338 546739..547938 1 NC_009636.1 PFAM: protein of unknown function DUF1006; KEGG: sme:SMc00961 hypothetical protein; hypothetical protein 547938 5321338 Smed_0504 Sinorhizobium medicae WSM419 hypothetical protein YP_001326195.1 546739 D 366394 CDS YP_001326196.1 150395729 5321339 548041..549456 1 NC_009636.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sme:SMc00960 TldD protein; peptidase U62 modulator of DNA gyrase 549456 5321339 Smed_0505 Sinorhizobium medicae WSM419 peptidase U62 modulator of DNA gyrase YP_001326196.1 548041 D 366394 CDS YP_001326197.1 150395730 5321340 complement(549494..550711) 1 NC_009636.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: sme:SMc00068 hypothetical protein; serine-type D-Ala-D-Ala carboxypeptidase 550711 5321340 Smed_0506 Sinorhizobium medicae WSM419 serine-type D-Ala-D-Ala carboxypeptidase YP_001326197.1 549494 R 366394 CDS YP_001326198.1 150395731 5321341 550909..551967 1 NC_009636.1 PFAM: polysaccharide deacetylase; KEGG: sme:SMc00001 hypothetical protein; polysaccharide deacetylase 551967 5321341 Smed_0507 Sinorhizobium medicae WSM419 polysaccharide deacetylase YP_001326198.1 550909 D 366394 CDS YP_001326199.1 150395732 5321342 552143..553456 1 NC_009636.1 KEGG: eba:ebA2590 hypothetical protein; hypothetical protein 553456 5321342 Smed_0508 Sinorhizobium medicae WSM419 hypothetical protein YP_001326199.1 552143 D 366394 CDS YP_001326200.1 150395733 5321343 complement(553495..554115) 1 NC_009636.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 554115 5321343 Smed_0509 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase YP_001326200.1 553495 R 366394 CDS YP_001326201.1 150395734 5321344 554223..554711 1 NC_009636.1 KEGG: sme:SMc00002 hypothetical protein; hypothetical protein 554711 5321344 Smed_0510 Sinorhizobium medicae WSM419 hypothetical protein YP_001326201.1 554223 D 366394 CDS YP_001326202.1 150395735 5321345 554913..555971 1 NC_009636.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: sme:SMc00003 putative chaperone protein; heat shock protein DnaJ domain-containing protein 555971 5321345 Smed_0511 Sinorhizobium medicae WSM419 heat shock protein DnaJ domain-containing protein YP_001326202.1 554913 D 366394 CDS YP_001326203.1 150395736 5321346 556171..556989 1 NC_009636.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 556989 5321346 Smed_0512 Sinorhizobium medicae WSM419 enoyl-ACP reductase YP_001326203.1 556171 D 366394 CDS YP_001326204.1 150395737 5321347 557206..557790 1 NC_009636.1 PFAM: Phosphoglycerate mutase; KEGG: sme:SMc00006 hypothetical protein; phosphoglycerate mutase 557790 5321347 Smed_0513 Sinorhizobium medicae WSM419 phosphoglycerate mutase YP_001326204.1 557206 D 366394 CDS YP_001326205.1 150395738 5321348 complement(557852..558154) 1 NC_009636.1 PFAM: protein of unknown function DUF1344; KEGG: sme:SMc00070 conserved hypothetical signal peptide protein; hypothetical protein 558154 5321348 Smed_0514 Sinorhizobium medicae WSM419 hypothetical protein YP_001326205.1 557852 R 366394 CDS YP_001326206.1 150395739 5321349 558536..559633 1 NC_009636.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 559633 5321349 Smed_0515 Sinorhizobium medicae WSM419 chorismate synthase YP_001326206.1 558536 D 366394 CDS YP_001326207.1 150395740 5321350 559679..560779 1 NC_009636.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: sme:SMc00008 probable riboflavin biosynthesis protein RIBA includes: GTP cyclohydrolase II 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 560779 5321350 Smed_0516 Sinorhizobium medicae WSM419 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001326207.1 559679 D 366394 CDS YP_001326208.1 150395741 5321351 complement(560845..561375) 1 NC_009636.1 PFAM: Invasion associated locus B family protein; KEGG: sme:SMc00071 hypothetical protein; invasion associated locus B family protein 561375 5321351 Smed_0517 Sinorhizobium medicae WSM419 invasion associated locus B family protein YP_001326208.1 560845 R 366394 CDS YP_001326209.1 150395742 5321352 561807..562691 1 NC_009636.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; KEGG: sme:SMc00009 cytochrome c oxidase subunit II; cytochrome c oxidase subunit II 562691 5321352 Smed_0518 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit II YP_001326209.1 561807 D 366394 CDS YP_001326210.1 150395743 5321353 562711..564399 1 NC_009636.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: sme:SMc00010 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I type 564399 5321353 Smed_0519 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit I type YP_001326210.1 562711 D 366394 CDS YP_001326211.1 150395744 5321354 564498..565448 1 NC_009636.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 565448 5321354 Smed_0520 Sinorhizobium medicae WSM419 protoheme IX farnesyltransferase YP_001326211.1 564498 D 366394 CDS YP_001326212.1 150395745 5321355 565448..565588 1 NC_009636.1 KEGG: sme:SMc00130 hypothetical protein; hypothetical protein 565588 5321355 Smed_0521 Sinorhizobium medicae WSM419 hypothetical protein YP_001326212.1 565448 D 366394 CDS YP_001326213.1 150395746 5321356 565600..566196 1 NC_009636.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 566196 5321356 Smed_0522 Sinorhizobium medicae WSM419 cytochrome C oxidase assembly protein YP_001326213.1 565600 D 366394 CDS YP_001326214.1 150395747 5321357 566258..567136 1 NC_009636.1 PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc00013 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 567136 5321357 Smed_0523 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit III YP_001326214.1 566258 D 366394 CDS YP_001326215.1 150395748 5321358 567175..567717 1 NC_009636.1 KEGG: mlo:mlr7497 hypothetical protein; hypothetical protein 567717 5321358 Smed_0524 Sinorhizobium medicae WSM419 hypothetical protein YP_001326215.1 567175 D 366394 CDS YP_001326216.1 150395749 5321359 567734..568117 1 NC_009636.1 PFAM: protein of unknown function DUF983; KEGG: sme:SMc00014 hypothetical/unknown transmembrane protein; hypothetical protein 568117 5321359 Smed_0525 Sinorhizobium medicae WSM419 hypothetical protein YP_001326216.1 567734 D 366394 CDS YP_001326217.1 150395750 5321360 568110..568853 1 NC_009636.1 PFAM: Surfeit locus 1 family protein; KEGG: sme:SMc00085 putative cytochrome oxidase complex biogenesis factor transmembrane protein; surfeit locus 1 family protein 568853 5321360 Smed_0526 Sinorhizobium medicae WSM419 surfeit locus 1 family protein YP_001326217.1 568110 D 366394 CDS YP_001326218.1 150395751 5321361 568944..569954 1 NC_009636.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 569954 ispH 5321361 ispH Sinorhizobium medicae WSM419 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001326218.1 568944 D 366394 CDS YP_001326219.1 150395752 5321362 570058..571038 1 NC_009636.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 571038 5321362 Smed_0528 Sinorhizobium medicae WSM419 homoserine kinase YP_001326219.1 570058 D 366394 CDS YP_001326220.1 150395753 5321363 571035..571496 1 NC_009636.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 571496 rnhA 5321363 rnhA Sinorhizobium medicae WSM419 ribonuclease H YP_001326220.1 571035 D 366394 CDS YP_001326221.1 150395754 5321364 complement(571618..572103) 1 NC_009636.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMc00072 hypothetical peroxiredoxin protein; redoxin domain-containing protein 572103 5321364 Smed_0530 Sinorhizobium medicae WSM419 redoxin domain-containing protein YP_001326221.1 571618 R 366394 CDS YP_001326222.1 150395755 5321365 complement(572155..573003) 1 NC_009636.1 KEGG: sme:SMc00073 hypothetical protein; hypothetical protein 573003 5321365 Smed_0531 Sinorhizobium medicae WSM419 hypothetical protein YP_001326222.1 572155 R 366394 CDS YP_001326223.1 150395756 5321366 573231..573836 1 NC_009636.1 PFAM: protein of unknown function DUF179; KEGG: sme:SMc00019 putative transcriptional regulator; hypothetical protein 573836 5321366 Smed_0532 Sinorhizobium medicae WSM419 hypothetical protein YP_001326223.1 573231 D 366394 CDS YP_001326224.1 150395757 5321367 complement(573936..576848) 1 NC_009636.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: sme:SMc00074 hypothetical transmembrane signal peptide protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 576848 5321367 Smed_0533 Sinorhizobium medicae WSM419 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001326224.1 573936 R 366394 CDS YP_001326225.1 150395758 5321368 complement(576848..577459) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00075 probable ribosomal-protein-alanine acetyltransferase; N-acetyltransferase GCN5 577459 5321368 Smed_0534 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326225.1 576848 R 366394 CDS YP_001326226.1 150395759 5321369 complement(577734..579038) 1 NC_009636.1 PFAM: peptidase M16 domain protein; KEGG: sme:SMc00451 putative processing protease protein; processing peptidase 579038 5321369 Smed_0535 Sinorhizobium medicae WSM419 processing peptidase YP_001326226.1 577734 R 366394 CDS YP_001326227.1 150395760 5321370 complement(579053..580450) 1 NC_009636.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 580450 5321370 Smed_0536 Sinorhizobium medicae WSM419 threonine synthase YP_001326227.1 579053 R 366394 CDS YP_001326228.1 150395761 5321371 580800..581339 1 NC_009636.1 KEGG: sme:SMc00020 hypothetical protein; hypothetical protein 581339 5321371 Smed_0537 Sinorhizobium medicae WSM419 hypothetical protein YP_001326228.1 580800 D 366394 CDS YP_001326229.1 150395762 5321372 complement(581506..582612) 1 NC_009636.1 PFAM: Extracellular ligand-binding receptor; KEGG: sme:SMc00078 probable LEU/ILE/VAL-binding protein; extracellular ligand-binding receptor 582612 5321372 Smed_0538 Sinorhizobium medicae WSM419 extracellular ligand-binding receptor YP_001326229.1 581506 R 366394 CDS YP_001326230.1 150395763 5321373 complement(582755..583450) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00079 hypothetical protein; HAD family hydrolase 583450 5321373 Smed_0539 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001326230.1 582755 R 366394 CDS YP_001326231.1 150395764 5321374 complement(583643..584326) 1 NC_009636.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc00080 hypothetical protein; regulatory protein ArsR 584326 5321374 Smed_0540 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001326231.1 583643 R 366394 CDS YP_001326232.1 150395765 5321375 584422..585618 1 NC_009636.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sme:SMc00021 adenine DNA methyltransferase protein; DNA methylase N-4/N-6 domain-containing protein 585618 5321375 Smed_0541 Sinorhizobium medicae WSM419 DNA methylase N-4/N-6 domain-containing protein YP_001326232.1 584422 D 366394 CDS YP_001326233.1 150395766 5321376 complement(585754..586413) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00081 hypothetical protein; HAD family hydrolase 586413 5321376 Smed_0542 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001326233.1 585754 R 366394 CDS YP_001326234.1 150395767 5321377 complement(586475..587587) 1 NC_009636.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sme:SMc00452 probable A/G-specific adenine glycosylase protein; A/G-specific adenine glycosylase 587587 5321377 Smed_0543 Sinorhizobium medicae WSM419 A/G-specific adenine glycosylase YP_001326234.1 586475 R 366394 CDS YP_001326235.1 150395768 5321378 587706..588212 1 NC_009636.1 PFAM: protein of unknown function DUF1159; KEGG: sme:SMc00022 hypothetical protein; hypothetical protein 588212 5321378 Smed_0544 Sinorhizobium medicae WSM419 hypothetical protein YP_001326235.1 587706 D 366394 CDS YP_001326236.1 150395769 5321379 588323..589132 1 NC_009636.1 PFAM: DSBA oxidoreductase; KEGG: sme:SMc00023 hypothetical protein; DSBA oxidoreductase 589132 5321379 Smed_0545 Sinorhizobium medicae WSM419 DSBA oxidoreductase YP_001326236.1 588323 D 366394 CDS YP_001326237.1 150395770 5321380 589212..589583 1 NC_009636.1 PFAM: protein of unknown function DUF559; KEGG: ret:RHE_CH01424 hypothetical protein; hypothetical protein 589583 5321380 Smed_0546 Sinorhizobium medicae WSM419 hypothetical protein YP_001326237.1 589212 D 366394 CDS YP_001326238.1 150395771 5321381 589852..593313 1 NC_009636.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: sme:SMc00024 putative chromosome partition protein; chromosome segregation protein SMC 593313 5321381 Smed_0547 Sinorhizobium medicae WSM419 chromosome segregation protein SMC YP_001326238.1 589852 D 366394 CDS YP_001326239.1 150395772 5321382 593658..596354 1 NC_009636.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 596354 5321382 Smed_0548 Sinorhizobium medicae WSM419 pyruvate phosphate dikinase YP_001326239.1 593658 D 366394 CDS YP_001326240.1 150395773 5321383 complement(596423..596671) 1 NC_009636.1 KEGG: sme:SMc00083 hypothetical/unknown protein; hypothetical protein 596671 5321383 Smed_0549 Sinorhizobium medicae WSM419 hypothetical protein YP_001326240.1 596423 R 366394 CDS YP_001326241.1 150395774 5321384 complement(596844..597233) 1 NC_009636.1 KEGG: sme:SMc00084 hypothetical/unknown protein; hypothetical protein 597233 5321384 Smed_0550 Sinorhizobium medicae WSM419 hypothetical protein YP_001326241.1 596844 R 366394 CDS YP_001326242.1 150395775 5321385 597547..598455 1 NC_009636.1 KEGG: sme:SMc00026 hypothetical protein; hypothetical protein 598455 5321385 Smed_0551 Sinorhizobium medicae WSM419 hypothetical protein YP_001326242.1 597547 D 366394 CDS YP_001326243.1 150395776 5321386 complement(598532..599440) 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00087 putative hydrolase protein; beta-lactamase domain-containing protein 599440 5321386 Smed_0552 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001326243.1 598532 R 366394 CDS YP_001326244.1 150395777 5321388 599990..602614 1 NC_009636.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMc00028 hypothetical protein; mechanosensitive ion channel protein MscS 602614 5321388 Smed_0553 Sinorhizobium medicae WSM419 mechanosensitive ion channel protein MscS YP_001326244.1 599990 D 366394 CDS YP_001326245.1 150395778 5321389 complement(602813..603226) 1 NC_009636.1 KEGG: sme:SMc00088 hypothetical/unknown transmembrane protein; hypothetical protein 603226 5321389 Smed_0554 Sinorhizobium medicae WSM419 hypothetical protein YP_001326245.1 602813 R 366394 CDS YP_001326246.1 150395779 5321391 603813..603956 1 NC_009636.1 KEGG: sme:SMc00029 hypothetical/unknown protein; hypothetical protein 603956 5321391 Smed_0555 Sinorhizobium medicae WSM419 hypothetical protein YP_001326246.1 603813 D 366394 CDS YP_001326247.1 150395780 5321392 complement(603964..604152) 1 NC_009636.1 SMART: helix-turn-helix domain protein; KEGG: sme:SMc00089 hypothetical protein; XRE family transcriptional regulator 604152 5321392 Smed_0556 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001326247.1 603964 R 366394 CDS YP_001326248.1 150395781 5321393 complement(604396..605892) 1 NC_009636.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 605892 cysN 5321393 cysN Sinorhizobium medicae WSM419 sulfate adenylyltransferase subunit 1 YP_001326248.1 604396 R 366394 CDS YP_001326249.1 150395782 5321394 complement(605892..606845) 1 NC_009636.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 606845 5321394 Smed_0558 Sinorhizobium medicae WSM419 sulfate adenylyltransferase subunit 2 YP_001326249.1 605892 R 366394 CDS YP_001326250.1 150395783 5321395 complement(606893..607669) 1 NC_009636.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: sme:SMc00092 probable phosphoadenosine phosphosulfate reductase PAPS reductase, thioredoxin dependent padops reductase 3'-phosphoadenylylsulfate sulfotransferase cysteine biosynthesis protein; adenylylsulfate reductase 607669 5321395 Smed_0559 Sinorhizobium medicae WSM419 adenylylsulfate reductase YP_001326250.1 606893 R 366394 CDS YP_001326251.1 150395784 5321396 607947..608333 1 NC_009636.1 KEGG: sme:SMc00030 hypothetical/unknown signal peptide protein; hypothetical protein 608333 5321396 Smed_0560 Sinorhizobium medicae WSM419 hypothetical protein YP_001326251.1 607947 D 366394 CDS YP_001326252.1 150395785 5321397 608333..608812 1 NC_009636.1 KEGG: sme:SMc00031 hypothetical/unknown transmembrane protein; hypothetical protein 608812 5321397 Smed_0561 Sinorhizobium medicae WSM419 hypothetical protein YP_001326252.1 608333 D 366394 CDS YP_001326253.1 150395786 5321398 complement(608815..610464) 1 NC_009636.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 610464 5321398 Smed_0562 Sinorhizobium medicae WSM419 choline dehydrogenase YP_001326253.1 608815 R 366394 CDS YP_001326254.1 150395787 5321399 complement(610662..612125) 1 NC_009636.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 612125 5321399 Smed_0563 Sinorhizobium medicae WSM419 betaine aldehyde dehydrogenase YP_001326254.1 610662 R 366394 CDS YP_001326255.1 150395788 5321400 complement(612127..613665) 1 NC_009636.1 PFAM: sulfatase; KEGG: sme:SMc00127 choline sulfatase protein; sulfatase 613665 5321400 Smed_0564 Sinorhizobium medicae WSM419 sulfatase YP_001326255.1 612127 R 366394 CDS YP_001326256.1 150395789 5321401 complement(613739..614347) 1 NC_009636.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 614347 5321401 Smed_0565 Sinorhizobium medicae WSM419 transcriptional regulator BetI YP_001326256.1 613739 R 366394 CDS YP_001326257.1 150395790 5321402 614491..615039 1 NC_009636.1 KEGG: sme:SMc00032 hypothetical protein; hypothetical protein 615039 5321402 Smed_0566 Sinorhizobium medicae WSM419 hypothetical protein YP_001326257.1 614491 D 366394 CDS YP_001326258.1 150395791 5321403 615148..616947 1 NC_009636.1 PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: sme:SMc00033 hypothetical protein; diguanylate cyclase/phosphodiesterase 616947 5321403 Smed_0567 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001326258.1 615148 D 366394 CDS YP_001326259.1 150395792 5321404 617028..618029 1 NC_009636.1 TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc00034 putative oxidoreductase protein; quinone oxidoreductase putative PIG3 618029 5321404 Smed_0568 Sinorhizobium medicae WSM419 quinone oxidoreductase putative PIG3 YP_001326259.1 617028 D 366394 CDS YP_001326260.1 150395793 5321405 complement(618299..619057) 1 NC_009636.1 KEGG: sme:SMc00096 hypothetical/unknown protein; hypothetical protein 619057 5321405 Smed_0569 Sinorhizobium medicae WSM419 hypothetical protein YP_001326260.1 618299 R 366394 CDS YP_001326261.1 150395794 5321406 619108..620118 1 NC_009636.1 PFAM: L-asparaginase II; KEGG: sme:SMc00035 hypothetical protein; L-asparaginase II 620118 5321406 Smed_0570 Sinorhizobium medicae WSM419 L-asparaginase II YP_001326261.1 619108 D 366394 CDS YP_001326262.1 150395795 5321407 620204..620824 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00036 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 620824 5321407 Smed_0571 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326262.1 620204 D 366394 CDS YP_001326263.1 150395796 5321408 621208..622143 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00037 putative transcription regulator protein; LysR family transcriptional regulator 622143 5321408 Smed_0572 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326263.1 621208 D 366394 CDS YP_001326264.1 150395797 5321409 complement(622103..622762) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00097 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 622762 5321409 Smed_0573 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326264.1 622103 R 366394 CDS YP_001326265.1 150395798 5321410 622989..625307 1 NC_009636.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: sme:SMc00038 hypothetical protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 625307 5321410 Smed_0574 Sinorhizobium medicae WSM419 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001326265.1 622989 D 366394 CDS YP_001326266.1 150395799 5321411 625670..626353 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc00039 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 626353 5321411 Smed_0575 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001326266.1 625670 D 366394 CDS YP_001326267.1 150395800 5321412 complement(626381..626857) 1 NC_009636.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: sme:SMc00098 putative transcription regulator protein; transcriptional regulator TrmB 626857 5321412 Smed_0576 Sinorhizobium medicae WSM419 transcriptional regulator TrmB YP_001326267.1 626381 R 366394 CDS YP_001326268.1 150395801 5321413 626965..627387 1 NC_009636.1 PFAM: OsmC family protein; KEGG: sme:SMc00040 hypothetical protein; OsmC family protein 627387 5321413 Smed_0577 Sinorhizobium medicae WSM419 OsmC family protein YP_001326268.1 626965 D 366394 CDS YP_001326269.1 150395802 5321414 complement(627547..629109) 1 NC_009636.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: sme:SMc00100 hypothetical protein; hypothetical protein 629109 5321414 Smed_0578 Sinorhizobium medicae WSM419 hypothetical protein YP_001326269.1 627547 R 366394 CDS YP_001326270.1 150395803 5321415 629400..629792 1 NC_009636.1 KEGG: sme:SMc00041 hypothetical protein; hypothetical protein 629792 5321415 Smed_0579 Sinorhizobium medicae WSM419 hypothetical protein YP_001326270.1 629400 D 366394 CDS YP_001326271.1 150395804 5321416 complement(629884..630711) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc00101 putative oxidoreductase protein; aldo/keto reductase 630711 5321416 Smed_0580 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001326271.1 629884 R 366394 CDS YP_001326272.1 150395805 5321417 complement(630815..631588) 1 NC_009636.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 631588 5321417 Smed_0581 Sinorhizobium medicae WSM419 trans-aconitate 2-methyltransferase YP_001326272.1 630815 R 366394 CDS YP_001326273.1 150395806 5321418 complement(631602..632264) 1 NC_009636.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc00103 putative alpha-halocarboxylic acid dehalogenase protein; haloacid dehalogenase 632264 5321418 Smed_0582 Sinorhizobium medicae WSM419 haloacid dehalogenase YP_001326273.1 631602 R 366394 CDS YP_001326274.1 150395807 5321419 complement(632549..633100) 1 NC_009636.1 KEGG: sme:SMc00104 hypothetical protein; hypothetical protein 633100 5321419 Smed_0583 Sinorhizobium medicae WSM419 hypothetical protein YP_001326274.1 632549 R 366394 CDS YP_001326275.1 150395808 5321420 complement(633195..634235) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc00105 putative oxidoreductase transmembrane protein; alcohol dehydrogenase 634235 5321420 Smed_0584 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001326275.1 633195 R 366394 CDS YP_001326276.1 150395809 5321421 634388..635269 1 NC_009636.1 PFAM: aminotransferase class IV; KEGG: sme:SMc00042 branched-chain amino acid aminotransferase; aminotransferase 635269 5321421 Smed_0585 Sinorhizobium medicae WSM419 aminotransferase YP_001326276.1 634388 D 366394 CDS YP_001326277.1 150395810 5321422 complement(635289..635699) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00106 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 635699 5321422 Smed_0586 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001326277.1 635289 R 366394 CDS YP_001326278.1 150395811 5321423 635936..636538 1 NC_009636.1 PFAM: manganese and iron superoxide dismutase; KEGG: sme:SMc00043 probable superoxide dismutase Fe protein; superoxide dismutase 636538 5321423 Smed_0587 Sinorhizobium medicae WSM419 superoxide dismutase YP_001326278.1 635936 D 366394 CDS YP_001326279.1 150395812 5321424 complement(636764..637477) 1 NC_009636.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: sme:SMc00107 putative transcription regulator protein; helix-turn-helix domain-containing protein 637477 5321424 Smed_0588 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001326279.1 636764 R 366394 CDS YP_001326280.1 150395813 5321425 637606..638244 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc00044 putative amino acid efflux protein; lysine exporter protein LysE/YggA 638244 5321425 Smed_0589 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001326280.1 637606 D 366394 CDS YP_001326281.1 150395814 5321426 638442..638888 1 NC_009636.1 PFAM: cytochrome c class II; KEGG: sme:SMc00045 putative cytochrome c signal peptide protein; cytochrome c class II 638888 5321426 Smed_0590 Sinorhizobium medicae WSM419 cytochrome c class II YP_001326281.1 638442 D 366394 CDS YP_001326282.1 150395815 5321427 639016..639960 1 NC_009636.1 KEGG: sme:SMc00086 putative diheme cytochrome c-type signal peptide protein; gluconate 2-dehydrogenase (acceptor) 639960 5321427 Smed_0591 Sinorhizobium medicae WSM419 gluconate 2-dehydrogenase (acceptor) YP_001326282.1 639016 D 366394 CDS YP_001326283.1 150395816 5321428 complement(639980..640483) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00108 putative acetyltransferase protein; N-acetyltransferase GCN5 640483 5321428 Smed_0592 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326283.1 639980 R 366394 CDS YP_001326284.1 150395817 5321429 complement(640675..641088) 1 NC_009636.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sme:SMc00109 putative transcription regulator protein; MerR family transcriptional regulator 641088 5321429 Smed_0593 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001326284.1 640675 R 366394 CDS YP_001326285.1 150395818 5321430 641373..642263 1 NC_009636.1 PFAM: beta-lactamase; KEGG: sme:SMc00047 putative beta-lactamase signal peptide protein; beta-lactamase 642263 5321430 Smed_0594 Sinorhizobium medicae WSM419 beta-lactamase YP_001326285.1 641373 D 366394 CDS YP_001326286.1 150395819 5321431 complement(642324..644654) 1 NC_009636.1 PFAM: Pyrrolo-quinoline quinone; KEGG: sme:SMc00110 probable glucose dehydrogenase (pyrroloquinoline-quinone) protein; quinoprotein glucose dehydrogenase 644654 5321431 Smed_0595 Sinorhizobium medicae WSM419 quinoprotein glucose dehydrogenase YP_001326286.1 642324 R 366394 CDS YP_001326287.1 150395820 5321432 complement(644934..646487) 1 NC_009636.1 PFAM: protein of unknown function UPF0061; KEGG: sme:SMc00453 hypothetical protein; hypothetical protein 646487 5321432 Smed_0596 Sinorhizobium medicae WSM419 hypothetical protein YP_001326287.1 644934 R 366394 CDS YP_001326288.1 150395821 5321433 complement(646566..647534) 1 NC_009636.1 PFAM: homocysteine S-methyltransferase; KEGG: rle:RL1357 putative homocysteine S-methyltransferase; homocysteine S-methyltransferase 647534 5321433 Smed_0597 Sinorhizobium medicae WSM419 homocysteine S-methyltransferase YP_001326288.1 646566 R 366394 CDS YP_001326289.1 150395822 5321434 complement(647681..648211) 1 NC_009636.1 PFAM: protein of unknown function DUF1697; KEGG: rle:RL1359 hypothetical protein; hypothetical protein 648211 5321434 Smed_0598 Sinorhizobium medicae WSM419 hypothetical protein YP_001326289.1 647681 R 366394 CDS YP_001326290.1 150395823 5321435 complement(648224..650332) 1 NC_009636.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sme:SMc00114 probable protease II oligopeptidase B hydrolase serine protease protein; oligopeptidase B 650332 5321435 Smed_0599 Sinorhizobium medicae WSM419 oligopeptidase B YP_001326290.1 648224 R 366394 CDS YP_001326291.1 150395824 5321436 complement(650504..651436) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_3052 transcriptional regulator; LysR family transcriptional regulator 651436 5321436 Smed_0600 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326291.1 650504 R 366394 CDS YP_001326292.1 150395825 5321437 651566..651841 1 NC_009636.1 KEGG: pen:PSEEN1394 hypothetical protein; hypothetical protein 651841 5321437 Smed_0601 Sinorhizobium medicae WSM419 hypothetical protein YP_001326292.1 651566 D 366394 CDS YP_001326293.1 150395826 5321438 complement(651880..652770) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00115 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 652770 5321438 Smed_0602 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001326293.1 651880 R 366394 CDS YP_001326294.1 150395827 5321439 653060..653554 1 NC_009636.1 PFAM: UspA domain protein; KEGG: sme:SMc00048 hypothetical protein; UspA domain-containing protein 653554 5321439 Smed_0603 Sinorhizobium medicae WSM419 UspA domain-containing protein YP_001326294.1 653060 D 366394 CDS YP_001326295.1 150395828 5321440 653610..653954 1 NC_009636.1 KEGG: sme:SMc00049 hypothetical protein; TraR/DksA family transcriptional regulator 653954 5321440 Smed_0604 Sinorhizobium medicae WSM419 TraR/DksA family transcriptional regulator YP_001326295.1 653610 D 366394 CDS YP_001326296.1 150395829 5321441 654254..654916 1 NC_009636.1 PFAM: Hly-III family protein; KEGG: sme:SMc00455 hypothetical transmembrane protein; Hly-III family protein 654916 5321441 Smed_0605 Sinorhizobium medicae WSM419 Hly-III family protein YP_001326296.1 654254 D 366394 CDS YP_001326297.1 150395830 5321442 complement(654993..655490) 1 NC_009636.1 KEGG: sme:SMc00116 hypothetical protein; hypothetical protein 655490 5321442 Smed_0606 Sinorhizobium medicae WSM419 hypothetical protein YP_001326297.1 654993 R 366394 CDS YP_001326298.1 150395831 5321443 655816..658191 1 NC_009636.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 658191 5321443 Smed_0607 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit A YP_001326298.1 655816 D 366394 CDS YP_001326299.1 150395832 5321444 658188..658607 1 NC_009636.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit B 658607 5321444 Smed_0608 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit B YP_001326299.1 658188 D 366394 CDS YP_001326300.1 150395833 5321445 658607..658984 1 NC_009636.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 658984 5321445 Smed_0609 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit C YP_001326300.1 658607 D 366394 CDS YP_001326301.1 150395834 5321446 658991..660553 1 NC_009636.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 660553 5321446 Smed_0610 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit D YP_001326301.1 658991 D 366394 CDS YP_001326302.1 150395835 5321447 660550..661026 1 NC_009636.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 661026 5321447 Smed_0611 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit E YP_001326302.1 660550 D 366394 CDS YP_001326303.1 150395836 5321448 661023..661409 1 NC_009636.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 661409 5321448 Smed_0612 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit F YP_001326303.1 661023 D 366394 CDS YP_001326304.1 150395837 5321449 661409..661759 1 NC_009636.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 661759 5321449 Smed_0613 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit G YP_001326304.1 661409 D 366394 CDS YP_001326305.1 150395838 5321450 662165..662596 1 NC_009636.1 PFAM: ROSMUCR transcriptional regulator; KEGG: sme:SMc00058 transcription regulator protein; MucR family transcriptional regulator 662596 5321450 Smed_0614 Sinorhizobium medicae WSM419 MucR family transcriptional regulator YP_001326305.1 662165 D 366394 CDS YP_001326306.1 150395839 5321451 complement(662694..663116) 1 NC_009636.1 PFAM: Fe-S metabolism associated SufE; KEGG: sme:SMc00118 conserved hypothetical protein; Fe-S metabolism associated SufE 663116 5321451 Smed_0615 Sinorhizobium medicae WSM419 Fe-S metabolism associated SufE YP_001326306.1 662694 R 366394 CDS YP_001326307.1 150395840 5321452 complement(663259..663678) 1 NC_009636.1 KEGG: sme:SMc00456 hypothetical protein; hypothetical protein 663678 5321452 Smed_0616 Sinorhizobium medicae WSM419 hypothetical protein YP_001326307.1 663259 R 366394 CDS YP_001326308.1 150395841 5321453 664192..665769 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc00059 putative sensor histidine kinase protein; histidine kinase 665769 5321453 Smed_0617 Sinorhizobium medicae WSM419 histidine kinase YP_001326308.1 664192 D 366394 CDS YP_001326309.1 150395842 5321454 665741..666679 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sme:SMc00060 hypothetical protein; peptidoglycan binding domain-containing protein 666679 5321454 Smed_0618 Sinorhizobium medicae WSM419 peptidoglycan binding domain-containing protein YP_001326309.1 665741 D 366394 CDS YP_001326310.1 150395843 5321455 666750..667097 1 NC_009636.1 PFAM: protein of unknown function DUF1491; KEGG: sme:SMc00061 hypothetical protein; hypothetical protein 667097 5321455 Smed_0619 Sinorhizobium medicae WSM419 hypothetical protein YP_001326310.1 666750 D 366394 CDS YP_001326311.1 150395844 5321456 complement(667251..668309) 1 NC_009636.1 KEGG: sme:SMc00120 hypothetical protein; hypothetical protein 668309 5321456 Smed_0620 Sinorhizobium medicae WSM419 hypothetical protein YP_001326311.1 667251 R 366394 CDS YP_001326312.1 150395845 5321457 668556..669218 1 NC_009636.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sme:SMc00062 hypothetical protein; SH3 type 3 domain-containing protein 669218 5321457 Smed_0621 Sinorhizobium medicae WSM419 SH3 type 3 domain-containing protein YP_001326312.1 668556 D 366394 CDS YP_001326313.1 150395846 5321458 669352..669654 1 NC_009636.1 KEGG: sme:SMc00063 hypothetical protein; hypothetical protein 669654 5321458 Smed_0622 Sinorhizobium medicae WSM419 hypothetical protein YP_001326313.1 669352 D 366394 CDS YP_001326314.1 150395847 5321459 669828..670112 1 NC_009636.1 hypothetical protein 670112 5321459 Smed_0623 Sinorhizobium medicae WSM419 hypothetical protein YP_001326314.1 669828 D 366394 CDS YP_001326315.1 150395848 5321460 complement(670199..670744) 1 NC_009636.1 KEGG: sme:SMc00128 hypothetical protein; hypothetical protein 670744 5321460 Smed_0624 Sinorhizobium medicae WSM419 hypothetical protein YP_001326315.1 670199 R 366394 CDS YP_001326316.1 150395849 5321461 complement(670737..671324) 1 NC_009636.1 PFAM: protein of unknown function DUF1214; KEGG: sme:SMc00457 hypothetical protein; hypothetical protein 671324 5321461 Smed_0625 Sinorhizobium medicae WSM419 hypothetical protein YP_001326316.1 670737 R 366394 CDS YP_001326317.1 150395850 5321462 complement(671421..673622) 1 NC_009636.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sme:SMc00122 putative penicillin-binding protein; 1A family penicillin-binding protein 673622 5321462 Smed_0626 Sinorhizobium medicae WSM419 1A family penicillin-binding protein YP_001326317.1 671421 R 366394 CDS YP_001326318.1 150395851 5321463 673774..674241 1 NC_009636.1 PFAM: protein of unknown function UPF0153; KEGG: sme:SMc00064 hypothetical protein; hypothetical protein 674241 5321463 Smed_0627 Sinorhizobium medicae WSM419 hypothetical protein YP_001326318.1 673774 D 366394 CDS YP_001326319.1 150395852 5321464 complement(674274..674609) 1 NC_009636.1 KEGG: sme:SMc00123 hypothetical protein; hypothetical protein 674609 5321464 Smed_0628 Sinorhizobium medicae WSM419 hypothetical protein YP_001326319.1 674274 R 366394 CDS YP_001326320.1 150395853 5321465 675193..675444 1 NC_009636.1 KEGG: sme:SMc00065 conserved hypothetical signal peptide protein; putative signal peptide protein 675444 5321465 Smed_0629 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326320.1 675193 D 366394 CDS YP_001326321.1 150395854 5321466 675487..676158 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc00458 probable transcription regulator protein; two component transcriptional regulator 676158 5321466 Smed_0630 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001326321.1 675487 D 366394 CDS YP_001326322.1 150395855 5321467 676148..677533 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc00129 probable sensor histidine kinase protein; integral membrane sensor signal transduction histidine kinase 677533 5321467 Smed_0631 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001326322.1 676148 D 366394 CDS YP_001326323.1 150395856 5321468 677790..678236 1 NC_009636.1 KEGG: sme:SMc00067 probable outer-membranne lipoprotein; putative outer-membranne lipoprotein 678236 5321468 Smed_0632 Sinorhizobium medicae WSM419 putative outer-membranne lipoprotein YP_001326323.1 677790 D 366394 CDS YP_001326324.1 150395857 5321469 678344..679513 1 NC_009636.1 KEGG: sme:SMc02361 cytochrome C-type biogenesis transmembrane protein; cytochrome C-type biogenesis transmembrane protein 679513 5321469 Smed_0633 Sinorhizobium medicae WSM419 cytochrome C-type biogenesis transmembrane protein YP_001326324.1 678344 D 366394 CDS YP_001326325.1 150395858 5321470 679510..679962 1 NC_009636.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 679962 5321470 Smed_0634 Sinorhizobium medicae WSM419 cytochrome c-type biogenesis protein CcmE YP_001326325.1 679510 D 366394 CDS YP_001326326.1 150395859 5321471 679959..681941 1 NC_009636.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sme:SMc02363 cytochrome C-type biogenesis transmembrane protein; cytochrome c-type biogenesis protein CcmF 681941 5321471 Smed_0635 Sinorhizobium medicae WSM419 cytochrome c-type biogenesis protein CcmF YP_001326326.1 679959 D 366394 CDS YP_001326327.1 150395860 5321472 681938..682393 1 NC_009636.1 PFAM: cytochrome C biogenesis protein; KEGG: sme:SMc02364 cytochrome C-type biogenesis transmembrane protein; cytochrome C biogenesis protein 682393 5321472 Smed_0636 Sinorhizobium medicae WSM419 cytochrome C biogenesis protein YP_001326327.1 681938 D 366394 CDS YP_001326328.1 150395861 5321473 682614..684167 1 NC_009636.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sme:SMc02365 protease precursor protein; protease Do 684167 5321473 Smed_0637 Sinorhizobium medicae WSM419 protease Do YP_001326328.1 682614 D 366394 CDS YP_001326329.1 150395862 5321474 684311..685012 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc02366 putative transcription regulator protein; two component transcriptional regulator 685012 5321474 Smed_0638 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001326329.1 684311 D 366394 CDS YP_001326330.1 150395863 5321475 685009..686406 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc02367 putative sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 686406 5321475 Smed_0639 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001326330.1 685009 D 366394 CDS YP_001326331.1 150395864 5321476 686506..689463 1 NC_009636.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 689463 5321476 Smed_0640 Sinorhizobium medicae WSM419 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001326331.1 686506 D 366394 CDS YP_001326332.1 150395865 5321477 complement(689473..691791) 1 NC_009636.1 KEGG: sme:SMc02369 putative sensor histidine kinase transmembrane protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 691791 5321477 Smed_0641 Sinorhizobium medicae WSM419 multi-sensor signal transduction histidine kinase YP_001326332.1 689473 R 366394 CDS YP_001326333.1 150395866 5321478 complement(692088..694742) 1 NC_009636.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sme:SMc02370 probable aminopeptidase N protein; aminopeptidase N 694742 pepN 5321478 pepN Sinorhizobium medicae WSM419 aminopeptidase N YP_001326333.1 692088 R 366394 CDS YP_001326334.1 150395867 5321479 695208..696146 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02371 hypothetical protein; hypothetical protein 696146 5321479 Smed_0643 Sinorhizobium medicae WSM419 hypothetical protein YP_001326334.1 695208 D 366394 CDS YP_001326335.1 150395868 5321480 complement(696167..697456) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc02372 putative transport transmembrane protein; major facilitator superfamily transporter 697456 5321480 Smed_0644 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326335.1 696167 R 366394 CDS YP_001326336.1 150395869 5321481 complement(697723..697878) 1 NC_009636.1 KEGG: sme:SMc02373 hypothetical unknown protein; hypothetical protein 697878 5321481 Smed_0645 Sinorhizobium medicae WSM419 hypothetical protein YP_001326336.1 697723 R 366394 CDS YP_001326337.1 150395870 5321482 complement(697916..698083) 1 NC_009636.1 KEGG: sme:SMc02374 hypothetical unknown protein; hypothetical protein 698083 5321482 Smed_0646 Sinorhizobium medicae WSM419 hypothetical protein YP_001326337.1 697916 R 366394 CDS YP_001326338.1 150395871 5321483 complement(698202..699071) 1 NC_009636.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: sme:SMc02375 putative DNA polymerase bacteriophage-type; phage SPO1 DNA polymerase-like protein 699071 5321483 Smed_0647 Sinorhizobium medicae WSM419 phage SPO1 DNA polymerase-like protein YP_001326338.1 698202 R 366394 CDS YP_001326339.1 150395872 5321484 complement(699160..700449) 1 NC_009636.1 KEGG: sme:SMc02376 putative heat shock protein; putative heat shock protein 700449 5321484 Smed_0648 Sinorhizobium medicae WSM419 putative heat shock protein YP_001326339.1 699160 R 366394 CDS YP_001326340.1 150395873 5321485 700717..702381 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: sme:SMc02377 probable electron transfer flavoprotein-ubiquinone oxidoreductase; electron-transferring-flavoprotein dehydrogenase 702381 5321485 Smed_0649 Sinorhizobium medicae WSM419 electron-transferring-flavoprotein dehydrogenase YP_001326340.1 700717 D 366394 CDS YP_001326341.1 150395874 5321486 702769..703767 1 NC_009636.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMc02378 putative periplasmic binding transmembrane protein; glycine betaine ABC transporter substrate-binding protein 703767 5321486 Smed_0650 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001326341.1 702769 D 366394 CDS YP_001326342.1 150395875 5321487 703967..704854 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02379 putative permease protein; binding-protein-dependent transport system inner membrane protein 704854 5321487 Smed_0651 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326342.1 703967 D 366394 CDS YP_001326343.1 150395876 5321488 complement(704948..705961) 1 NC_009636.1 TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc02380 putative oxidoreductase transmembrane protein; zinc-binding alcohol dehydrogenase 705961 5321488 Smed_0652 Sinorhizobium medicae WSM419 zinc-binding alcohol dehydrogenase YP_001326343.1 704948 R 366394 CDS YP_001326344.1 150395877 5321489 706062..706463 1 NC_009636.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02381 hypothetical protein; HxlR family transcriptional regulator 706463 5321489 Smed_0653 Sinorhizobium medicae WSM419 HxlR family transcriptional regulator YP_001326344.1 706062 D 366394 CDS YP_001326345.1 150395878 5321490 706579..707505 1 NC_009636.1 PFAM: diacylglycerol kinase catalytic region; KEGG: sme:SMc02382 hypothetical protein; diacylglycerol kinase catalytic protein 707505 5321490 Smed_0654 Sinorhizobium medicae WSM419 diacylglycerol kinase catalytic protein YP_001326345.1 706579 D 366394 CDS YP_001326346.1 150395879 5321491 complement(707521..709002) 1 NC_009636.1 PFAM: glycosyl transferase family 39; KEGG: sme:SMc02383 hypothetical protein; glycosyl transferase family protein 709002 5321491 Smed_0655 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001326346.1 707521 R 366394 CDS YP_001326347.1 150395880 5321492 complement(708995..709984) 1 NC_009636.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMc02384 putative glycosyltransferase transmembrane protein; glycosyl transferase family protein 709984 5321492 Smed_0656 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001326347.1 708995 R 366394 CDS YP_001326348.1 150395881 5321493 710109..711059 1 NC_009636.1 KEGG: sme:SMc02385 hypothetical protein; hypothetical protein 711059 5321493 Smed_0657 Sinorhizobium medicae WSM419 hypothetical protein YP_001326348.1 710109 D 366394 CDS YP_001326349.1 150395882 5321494 complement(711165..712667) 1 NC_009636.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 712667 5321494 Smed_0658 Sinorhizobium medicae WSM419 AMP nucleosidase YP_001326349.1 711165 R 366394 CDS YP_001326350.1 150395883 5321495 complement(712795..713115) 1 NC_009636.1 PFAM: protein of unknown function UPF0060; KEGG: sme:SMc02387 hypothetical transmembrane protein; hypothetical protein 713115 5321495 Smed_0659 Sinorhizobium medicae WSM419 hypothetical protein YP_001326350.1 712795 R 366394 CDS YP_001326351.1 150395884 5321496 complement(713190..713363) 1 NC_009636.1 KEGG: sme:SMc02388 hypothetical unknown transmembrane protein; hypothetical protein 713363 5321496 Smed_0660 Sinorhizobium medicae WSM419 hypothetical protein YP_001326351.1 713190 R 366394 CDS YP_001326352.1 150395885 5321497 complement(713377..713550) 1 NC_009636.1 KEGG: sme:SMc02389 hypothetical unknown transmembrane protein; hypothetical protein 713550 5321497 Smed_0661 Sinorhizobium medicae WSM419 hypothetical protein YP_001326352.1 713377 R 366394 CDS YP_001326353.1 150395886 5321498 713791..714492 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc02390 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 714492 5321498 Smed_0662 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326353.1 713791 D 366394 CDS YP_001326354.1 150395887 5321499 complement(714583..714924) 1 NC_009636.1 KEGG: sme:SMc02391 hypothetical protein; hypothetical protein 714924 5321499 Smed_0663 Sinorhizobium medicae WSM419 hypothetical protein YP_001326354.1 714583 R 366394 CDS YP_001326355.1 150395888 5321500 715521..715787 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sme:SMc02392 hypothetical protein; Sel1 domain-containing protein 715787 5321500 Smed_0664 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001326355.1 715521 D 366394 CDS YP_001326356.1 150395889 5321501 complement(715869..716990) 1 NC_009636.1 catalyzes the formation of histidinol phosphate and 2-oxoglutarate from glutamate and imidazole acetol-phosphate; histidinol-phosphate aminotransferase 716990 5321501 Smed_0665 Sinorhizobium medicae WSM419 histidinol-phosphate aminotransferase YP_001326356.1 715869 R 366394 CDS YP_001326357.1 150395890 5321503 717375..717677 1 NC_009636.1 hypothetical protein 717677 5321503 Smed_0666 Sinorhizobium medicae WSM419 hypothetical protein YP_001326357.1 717375 D 366394 CDS YP_001326358.1 150395891 5321504 717880..718548 1 NC_009636.1 hypothetical protein 718548 5321504 Smed_0667 Sinorhizobium medicae WSM419 hypothetical protein YP_001326358.1 717880 D 366394 CDS YP_001326359.1 150395892 5321505 719074..720111 1 NC_009636.1 PFAM: porin; KEGG: sme:SMc02396 probable outer membrane protein; porin 720111 5321505 Smed_0668 Sinorhizobium medicae WSM419 porin YP_001326359.1 719074 D 366394 CDS YP_001326360.1 150395893 5321506 complement(720394..721425) 1 NC_009636.1 PFAM: phage integrase family protein; KEGG: sme:SMc02397 putative integrase protein; phage integrase family protein 721425 5321506 Smed_0669 Sinorhizobium medicae WSM419 phage integrase family protein YP_001326360.1 720394 R 366394 CDS YP_001326361.1 150395894 5321507 complement(721501..722559) 1 NC_009636.1 PFAM: porin; KEGG: sme:SMc02396 probable outer membrane protein; porin 722559 5321507 Smed_0670 Sinorhizobium medicae WSM419 porin YP_001326361.1 721501 R 366394 CDS YP_001326362.1 150395895 5321508 complement(722770..723243) 1 NC_009636.1 PFAM: BA14K family protein; KEGG: sme:SMc02401 hypothetical protein; BA14K family protein 723243 5321508 Smed_0671 Sinorhizobium medicae WSM419 BA14K family protein YP_001326362.1 722770 R 366394 CDS YP_001326363.1 150395896 5321509 complement(723414..725471) 1 NC_009636.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc02403 putative murein transglycosylase protein; lytic transglycosylase 725471 5321509 Smed_0672 Sinorhizobium medicae WSM419 lytic transglycosylase YP_001326363.1 723414 R 366394 CDS YP_001326364.1 150395897 5321510 725763..726647 1 NC_009636.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 726647 5321510 Smed_0673 Sinorhizobium medicae WSM419 dihydrodipicolinate synthase YP_001326364.1 725763 D 366394 CDS YP_001326365.1 150395898 5321511 726647..727126 1 NC_009636.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 727126 smpB 5321511 smpB Sinorhizobium medicae WSM419 SsrA-binding protein YP_001326365.1 726647 D 366394 CDS YP_001326366.1 150395899 5321512 complement(727344..727925) 1 NC_009636.1 PFAM: protein of unknown function DUF88; KEGG: sme:SMc02407 hypothetical protein; hypothetical protein 727925 5321512 Smed_0675 Sinorhizobium medicae WSM419 hypothetical protein YP_001326366.1 727344 R 366394 CDS YP_001326367.1 150395900 5321513 728394..728801 1 NC_009636.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 728801 5321513 Smed_0676 Sinorhizobium medicae WSM419 DNA-directed RNA polymerase subunit omega YP_001326367.1 728394 D 366394 CDS YP_001326368.1 150395901 5321514 728903..731128 1 NC_009636.1 KEGG: sme:SMc02659 putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 731128 5321514 Smed_0677 Sinorhizobium medicae WSM419 (p)ppGpp synthetase I SpoT/RelA YP_001326368.1 728903 D 366394 CDS YP_001326369.1 150395902 5321515 731343..731495 1 NC_009636.1 KEGG: sme:SMc02656 hypothetical unknown protein; hypothetical protein 731495 5321515 Smed_0678 Sinorhizobium medicae WSM419 hypothetical protein YP_001326369.1 731343 D 366394 CDS YP_001326370.1 150395903 5321516 731621..732253 1 NC_009636.1 KEGG: sme:SMc02655 hypothetical protein; hypothetical protein 732253 5321516 Smed_0679 Sinorhizobium medicae WSM419 hypothetical protein YP_001326370.1 731621 D 366394 CDS YP_001326371.1 150395904 5321517 732250..732669 1 NC_009636.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 732669 acpS 5321517 acpS Sinorhizobium medicae WSM419 4'-phosphopantetheinyl transferase YP_001326371.1 732250 D 366394 CDS YP_001326372.1 150395905 5321518 732830..733573 1 NC_009636.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: sme:SMc02653 probable signal peptidase I transmembrane protein; signal peptidase I 733573 5321518 Smed_0681 Sinorhizobium medicae WSM419 signal peptidase I YP_001326372.1 732830 D 366394 CDS YP_001326373.1 150395906 5321519 733573..734289 1 NC_009636.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 734289 5321519 Smed_0682 Sinorhizobium medicae WSM419 ribonuclease III YP_001326373.1 733573 D 366394 CDS YP_001326374.1 150395907 5321520 734298..735230 1 NC_009636.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 735230 era 5321520 era Sinorhizobium medicae WSM419 GTP-binding protein Era YP_001326374.1 734298 D 366394 CDS YP_001326375.1 150395908 5321521 complement(735437..736435) 1 NC_009636.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sme:SMc02646 hypothetical protein; glycerophosphoryl diester phosphodiesterase 736435 5321521 Smed_0684 Sinorhizobium medicae WSM419 glycerophosphoryl diester phosphodiesterase YP_001326375.1 735437 R 366394 CDS YP_001326376.1 150395909 5321522 736931..738187 1 NC_009636.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc02645 putative cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase 738187 5321522 Smed_0685 Sinorhizobium medicae WSM419 cyclopropane-fatty-acyl-phospholipid synthase YP_001326376.1 736931 D 366394 CDS YP_001326377.1 150395910 5321523 738473..740779 1 NC_009636.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sme:SMc02644 hypothetical protein; RNA-binding S1 domain-containing protein 740779 5321523 Smed_0686 Sinorhizobium medicae WSM419 RNA-binding S1 domain-containing protein YP_001326377.1 738473 D 366394 CDS YP_001326378.1 150395911 5321524 740947..741333 1 NC_009636.1 KEGG: sme:SMc02642 hypothetical signal peptide protein; putative signal peptide protein 741333 5321524 Smed_0687 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326378.1 740947 D 366394 CDS YP_001326379.1 150395912 5321525 complement(741511..742824) 1 NC_009636.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: sme:SMc02641 UDP-glucose 6-dehydrogenase protein; UDP-glucose 6-dehydrogenase 742824 5321525 Smed_0688 Sinorhizobium medicae WSM419 UDP-glucose 6-dehydrogenase YP_001326379.1 741511 R 366394 CDS YP_001326380.1 150395913 5321526 complement(742955..743980) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc02640 UDP-glucuronic acid epimerase protein; NAD-dependent epimerase/dehydratase 743980 5321526 Smed_0689 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001326380.1 742955 R 366394 CDS YP_001326381.1 150395914 5321527 complement(744051..744383) 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc02639 putative transcription regulator protein; regulatory protein ArsR 744383 5321527 Smed_0690 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001326381.1 744051 R 366394 CDS YP_001326382.1 150395915 5321528 744435..744917 1 NC_009636.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sme:SMc02638 hypothetical protein; activator of Hsp90 ATPase 1 family protein 744917 5321528 Smed_0691 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001326382.1 744435 D 366394 CDS YP_001326383.1 150395916 5321529 744929..745291 1 NC_009636.1 KEGG: sme:SMc02637 hypothetical protein; hypothetical protein 745291 5321529 Smed_0692 Sinorhizobium medicae WSM419 hypothetical protein YP_001326383.1 744929 D 366394 CDS YP_001326384.1 150395917 5321530 745518..746267 1 NC_009636.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 746267 recO 5321530 recO Sinorhizobium medicae WSM419 DNA repair protein RecO YP_001326384.1 745518 D 366394 CDS YP_001326385.1 150395918 5321531 complement(746298..748301) 1 NC_009636.1 PFAM: protein of unknown function DUF839; KEGG: sme:SMc02634 hypothetical transmembrane protein; hypothetical protein 748301 5321531 Smed_0694 Sinorhizobium medicae WSM419 hypothetical protein YP_001326385.1 746298 R 366394 CDS YP_001326386.1 150395919 5321532 748540..751320 1 NC_009636.1 KEGG: sme:SMc02633 hypothetical protein; hypothetical protein 751320 5321532 Smed_0695 Sinorhizobium medicae WSM419 hypothetical protein YP_001326386.1 748540 D 366394 CDS YP_001326387.1 150395920 5321533 751317..751973 1 NC_009636.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sme:SMc02632 hypothetical protein; metal dependent phosphohydrolase 751973 5321533 Smed_0696 Sinorhizobium medicae WSM419 metal dependent phosphohydrolase YP_001326387.1 751317 D 366394 CDS YP_001326388.1 150395921 5321534 752052..752903 1 NC_009636.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: sme:SMc02631 hypothetical protein; MOSC domain-containing protein 752903 5321534 Smed_0697 Sinorhizobium medicae WSM419 MOSC domain-containing protein YP_001326388.1 752052 D 366394 CDS YP_001326389.1 150395922 5321535 753031..754269 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc02603 putative transport transmembrane protein; major facilitator superfamily transporter 754269 5321535 Smed_0698 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326389.1 753031 D 366394 CDS YP_001326390.1 150395923 5321536 754451..755530 1 NC_009636.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 755530 5321536 Smed_0699 Sinorhizobium medicae WSM419 quinolinate synthetase YP_001326390.1 754451 D 366394 CDS YP_001326391.1 150395924 5321537 755648..757246 1 NC_009636.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 757246 5321537 Smed_0700 Sinorhizobium medicae WSM419 L-aspartate oxidase YP_001326391.1 755648 D 366394 CDS YP_001326392.1 150395925 5321538 757296..758195 1 NC_009636.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: sme:SMc02598 probable nicotinate-nucleotide pyrophosphorylase carboxylating protein; nicotinate-nucleotide pyrophosphorylase 758195 5321538 Smed_0701 Sinorhizobium medicae WSM419 nicotinate-nucleotide pyrophosphorylase YP_001326392.1 757296 D 366394 CDS YP_001326393.1 150395926 5321539 758299..758817 1 NC_009636.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: sme:SMc02597 putative superoxide dismutase Cu-Zn precursor (bacteriocuprein) transmembrane protein; copper/zinc binding superoxide dismutase 758817 5321539 Smed_0702 Sinorhizobium medicae WSM419 copper/zinc binding superoxide dismutase YP_001326393.1 758299 D 366394 CDS YP_001326394.1 150395927 5321540 complement(758891..759859) 1 NC_009636.1 KEGG: sme:SMc02565 hypothetical protein; hypothetical protein 759859 5321540 Smed_0703 Sinorhizobium medicae WSM419 hypothetical protein YP_001326394.1 758891 R 366394 CDS YP_001326395.1 150395928 5321541 complement(759849..760385) 1 NC_009636.1 KEGG: sme:SMc02561 hypothetical protein; hypothetical protein 760385 5321541 Smed_0704 Sinorhizobium medicae WSM419 hypothetical protein YP_001326395.1 759849 R 366394 CDS YP_001326396.1 150395929 5321542 complement(760388..760993) 1 NC_009636.1 KEGG: sme:SMc02559 hypothetical protein; hypothetical protein 760993 5321542 Smed_0705 Sinorhizobium medicae WSM419 hypothetical protein YP_001326396.1 760388 R 366394 CDS YP_001326397.1 150395930 5321543 complement(760993..761841) 1 NC_009636.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc02558 hypothetical protein; glycine cleavage T protein (aminomethyl transferase) 761841 5321543 Smed_0706 Sinorhizobium medicae WSM419 glycine cleavage T protein (aminomethyl transferase) YP_001326397.1 760993 R 366394 CDS YP_001326398.1 150395931 5321544 complement(761951..762697) 1 NC_009636.1 KEGG: sme:SMc02557 hypothetical protein; hypothetical protein 762697 5321544 Smed_0707 Sinorhizobium medicae WSM419 hypothetical protein YP_001326398.1 761951 R 366394 CDS YP_001326399.1 150395932 5321545 complement(762713..762982) 1 NC_009636.1 KEGG: sme:SMc02556 hypothetical protein; hypothetical protein 762982 5321545 Smed_0708 Sinorhizobium medicae WSM419 hypothetical protein YP_001326399.1 762713 R 366394 CDS YP_001326400.1 150395933 5321546 complement(763140..763583) 1 NC_009636.1 KEGG: sme:SMc02555 conserved hypothetical signal peptide protein; putative signal peptide protein 763583 5321546 Smed_0709 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326400.1 763140 R 366394 CDS YP_001326401.1 150395934 5321547 complement(763580..764044) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc02554 hypothetical protein; NUDIX hydrolase 764044 5321547 Smed_0710 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001326401.1 763580 R 366394 CDS YP_001326402.1 150395935 5321548 764103..764873 1 NC_009636.1 PFAM: protein of unknown function DUF159; KEGG: sme:SMc02553 hypothetical protein; hypothetical protein 764873 5321548 Smed_0711 Sinorhizobium medicae WSM419 hypothetical protein YP_001326402.1 764103 D 366394 CDS YP_001326403.1 150395936 5321549 complement(764912..765061) 1 NC_009636.1 KEGG: sme:SMc02552 hypothetical unknown protein; hypothetical protein 765061 5321549 Smed_0712 Sinorhizobium medicae WSM419 hypothetical protein YP_001326403.1 764912 R 366394 CDS YP_001326404.1 150395937 5321550 765466..766866 1 NC_009636.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 766866 cysS 5321550 cysS Sinorhizobium medicae WSM419 cysteinyl-tRNA synthetase YP_001326404.1 765466 D 366394 CDS YP_001326405.1 150395938 5321551 766903..767385 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc02550 hypothetical protein; glutathione-dependent formaldehyde-activating protein 767385 5321551 Smed_0714 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001326405.1 766903 D 366394 CDS YP_001326406.1 150395939 5321552 767382..767861 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc02549 hypothetical protein; glutathione-dependent formaldehyde-activating protein 767861 5321552 Smed_0715 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001326406.1 767382 D 366394 CDS YP_001326407.1 150395940 5321553 767858..768358 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc02548 hypothetical protein; glutathione-dependent formaldehyde-activating protein 768358 5321553 Smed_0716 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001326407.1 767858 D 366394 CDS YP_001326408.1 150395941 5321554 768355..769317 1 NC_009636.1 TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc02547 putative proline iminopeptidase protein; proline iminopeptidase 769317 5321554 Smed_0717 Sinorhizobium medicae WSM419 proline iminopeptidase YP_001326408.1 768355 D 366394 CDS YP_001326409.1 150395942 5321555 769374..770990 1 NC_009636.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: sme:SMc02546 2-isopropylmalate synthase; putative alpha-isopropylmalate/homocitrate synthase family transferase 770990 5321555 Smed_0718 Sinorhizobium medicae WSM419 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_001326409.1 769374 D 366394 CDS YP_001326410.1 150395943 5321556 771249..772190 1 NC_009636.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02545 hypothetical transmembrane protein; transporter DMT superfamily protein 772190 5321556 Smed_0719 Sinorhizobium medicae WSM419 transporter DMT superfamily protein YP_001326410.1 771249 D 366394 CDS YP_001326411.1 150395944 5321557 complement(772222..772839) 1 NC_009636.1 PFAM: conserved hypothetical protein 730; KEGG: sme:SMc02544 hypothetical protein; hypothetical protein 772839 5321557 Smed_0720 Sinorhizobium medicae WSM419 hypothetical protein YP_001326411.1 772222 R 366394 CDS YP_001326412.1 150395945 5321558 773082..774800 1 NC_009636.1 PFAM: Peptidoglycan-binding LysM; KEGG: sme:SMc02543 hypothetical protein; peptidoglycan-binding LysM 774800 5321558 Smed_0721 Sinorhizobium medicae WSM419 peptidoglycan-binding LysM YP_001326412.1 773082 D 366394 CDS YP_001326413.1 150395946 5321559 775094..776977 1 NC_009636.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00550 probable ABC transporter ATP-binding transmembrane protein; ABC transporter-like protein 776977 5321559 Smed_0722 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326413.1 775094 D 366394 CDS YP_001326414.1 150395947 5321560 777084..777782 1 NC_009636.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 777782 5321560 Smed_0723 Sinorhizobium medicae WSM419 phosphatidylserine decarboxylase YP_001326414.1 777084 D 366394 CDS YP_001326415.1 150395948 5321561 777792..778679 1 NC_009636.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc00552 putative CDP-diacylglycerol--serine O-phosphatidyltransferase transmembrane protein; CDP-diacylglycerol--serine O-phosphatidyltransferase 778679 5321561 Smed_0724 Sinorhizobium medicae WSM419 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001326415.1 777792 D 366394 CDS YP_001326416.1 150395949 5321562 778954..780300 1 NC_009636.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase IS4 family protein 780300 5321562 Smed_0725 Sinorhizobium medicae WSM419 transposase IS4 family protein YP_001326416.1 778954 D 366394 CDS YP_001326417.1 150395950 5321563 complement(780355..781107) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00553 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 781107 5321563 Smed_0726 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326417.1 780355 R 366394 CDS YP_001326418.1 150395951 5321564 complement(781107..782597) 1 NC_009636.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 782597 5321564 Smed_0727 Sinorhizobium medicae WSM419 amidophosphoribosyltransferase YP_001326418.1 781107 R 366394 CDS YP_001326419.1 150395952 5321565 complement(782743..783387) 1 NC_009636.1 PFAM: Colicin V production protein; KEGG: sme:SMc00555 putative colicin V production homolog transmembrane protein; colicin V production protein 783387 5321565 Smed_0728 Sinorhizobium medicae WSM419 colicin V production protein YP_001326419.1 782743 R 366394 CDS YP_001326420.1 150395953 5321566 complement(783420..784823) 1 NC_009636.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 784823 5321566 Smed_0729 Sinorhizobium medicae WSM419 DNA repair protein RadA YP_001326420.1 783420 R 366394 CDS YP_001326421.1 150395954 5321567 complement(784944..786170) 1 NC_009636.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; KEGG: sme:SMc00557 putative alanine racemase protein; alanine racemase 786170 5321567 Smed_0730 Sinorhizobium medicae WSM419 alanine racemase YP_001326421.1 784944 R 366394 CDS YP_001326422.1 150395955 5321568 786214..787071 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00558 putative transcription regulator protein; AraC family transcriptional regulator 787071 5321568 Smed_0731 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001326422.1 786214 D 366394 CDS YP_001326423.1 150395956 5321569 787191..787844 1 NC_009636.1 PFAM: AzlC family protein; KEGG: sme:SMc00559 hypothetical protein; AzlC family protein 787844 5321569 Smed_0732 Sinorhizobium medicae WSM419 AzlC family protein YP_001326423.1 787191 D 366394 CDS YP_001326424.1 150395957 5321570 787841..788143 1 NC_009636.1 PFAM: branched-chain amino acid transport; KEGG: sme:SMc00560 hypothetical protein; branched-chain amino acid transport 788143 5321570 Smed_0733 Sinorhizobium medicae WSM419 branched-chain amino acid transport YP_001326424.1 787841 D 366394 CDS YP_001326425.1 150395958 5321571 complement(788168..789667) 1 NC_009636.1 unwinds double stranded DNA; replicative DNA helicase 789667 5321571 Smed_0734 Sinorhizobium medicae WSM419 replicative DNA helicase YP_001326425.1 788168 R 366394 CDS YP_001326426.1 150395959 5321572 789989..790441 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc00562 putative transcription regulator protein; MarR family transcriptional regulator 790441 5321572 Smed_0735 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001326426.1 789989 D 366394 CDS YP_001326427.1 150395960 5321573 790438..792048 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00563 putative transport protein transmembrane; major facilitator superfamily transporter 792048 5321573 Smed_0736 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326427.1 790438 D 366394 CDS YP_001326428.1 150395961 5321574 792065..793132 1 NC_009636.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMc00564 putative transport protein transmembrane; secretion protein HlyD family protein 793132 5321574 Smed_0737 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001326428.1 792065 D 366394 CDS YP_001326429.1 150395962 5321575 complement(793256..793831) 1 NC_009636.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 793831 rplI 5321575 rplI Sinorhizobium medicae WSM419 50S ribosomal protein L9 YP_001326429.1 793256 R 366394 CDS YP_001326430.1 150395963 5321576 complement(793866..794819) 1 NC_009636.1 KEGG: sme:SMc00566 hypothetical protein; hypothetical protein 794819 5321576 Smed_0739 Sinorhizobium medicae WSM419 hypothetical protein YP_001326430.1 793866 R 366394 CDS YP_001326431.1 150395964 5321577 complement(795009..795257) 1 NC_009636.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 795257 rpsR 5321577 rpsR Sinorhizobium medicae WSM419 30S ribosomal protein S18 YP_001326431.1 795009 R 366394 CDS YP_001326432.1 150395965 5321578 complement(795283..795720) 1 NC_009636.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 795720 rpsF 5321578 rpsF Sinorhizobium medicae WSM419 30S ribosomal protein S6 YP_001326432.1 795283 R 366394 CDS YP_001326433.1 150395966 5321579 796066..796398 1 NC_009636.1 KEGG: sme:SMc00569 hypothetical protein; hypothetical protein 796398 5321579 Smed_0742 Sinorhizobium medicae WSM419 hypothetical protein YP_001326433.1 796066 D 366394 CDS YP_001326434.1 150395967 5321580 complement(796425..797468) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc00570 putative oxidoreductase protein; aldo/keto reductase 797468 5321580 Smed_0743 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001326434.1 796425 R 366394 CDS YP_001326435.1 150395968 5321581 797820..798764 1 NC_009636.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: sme:SMc00571 acyl-carrier-protein S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 798764 5321581 Smed_0744 Sinorhizobium medicae WSM419 malonyl CoA-acyl carrier protein transacylase YP_001326435.1 797820 D 366394 CDS YP_001326436.1 150395969 5321582 798789..799526 1 NC_009636.1 catalyzes the formation of 3-hydroxyacyl-ACP from 3-keto-acyl-ACP; in the rhizobia this protein interacts with NodF to allow for the synthesis of highly polyunsaturated fatty acids necessary for nodulation; 3-ketoacyl-ACP reductase 799526 5321582 Smed_0745 Sinorhizobium medicae WSM419 3-ketoacyl-ACP reductase YP_001326436.1 798789 D 366394 CDS YP_001326437.1 150395970 5321583 799846..800082 1 NC_009636.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 800082 acpP 5321583 acpP Sinorhizobium medicae WSM419 acyl carrier protein YP_001326437.1 799846 D 366394 CDS YP_001326438.1 150395971 5321584 800391..801656 1 NC_009636.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 801656 5321584 Smed_0747 Sinorhizobium medicae WSM419 3-oxoacyl-(acyl carrier protein) synthase II YP_001326438.1 800391 D 366394 CDS YP_001326439.1 150395972 5321585 801944..803143 1 NC_009636.1 PFAM: aminodeoxychorismate lyase; KEGG: sme:SMc00575 hypothetical protein; aminodeoxychorismate lyase 803143 5321585 Smed_0748 Sinorhizobium medicae WSM419 aminodeoxychorismate lyase YP_001326439.1 801944 D 366394 CDS YP_001326440.1 150395973 5321586 complement(803185..804825) 1 NC_009636.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_C6721 acetolactate synthase, large subunit; thiamine pyrophosphate binding domain-containing protein 804825 5321586 Smed_0749 Sinorhizobium medicae WSM419 thiamine pyrophosphate binding domain-containing protein YP_001326440.1 803185 R 366394 CDS YP_001326441.1 150395974 5321587 complement(804827..805789) 1 NC_009636.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: pfl:PFL_5026 cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein P47K 805789 5321587 Smed_0750 Sinorhizobium medicae WSM419 cobalamin synthesis protein P47K YP_001326441.1 804827 R 366394 CDS YP_001326442.1 150395975 5321588 complement(805783..807510) 1 NC_009636.1 PFAM: Amidohydrolase 3; KEGG: pfl:PFL_5025 amidohydrolase family protein; amidohydrolase 3 807510 5321588 Smed_0751 Sinorhizobium medicae WSM419 amidohydrolase 3 YP_001326442.1 805783 R 366394 CDS YP_001326443.1 150395976 5321589 complement(807545..809128) 1 NC_009636.1 KEGG: mlo:mll7671 hypothetical protein; hypothetical protein 809128 5321589 Smed_0752 Sinorhizobium medicae WSM419 hypothetical protein YP_001326443.1 807545 R 366394 CDS YP_001326444.1 150395977 5321590 809248..810156 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mlr7672 transcriptional regulator; LysR family transcriptional regulator 810156 5321590 Smed_0753 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326444.1 809248 D 366394 CDS YP_001326445.1 150395978 5321591 810258..811349 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mlr7674 ABC transporter, ATP-binding protein; ABC transporter-like protein 811349 5321591 Smed_0754 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326445.1 810258 D 366394 CDS YP_001326446.1 150395979 5321592 811404..812519 1 NC_009636.1 KEGG: mlo:mlr7676 ABC transporter, binding protein; ABC transporter binding protein 812519 5321592 Smed_0755 Sinorhizobium medicae WSM419 ABC transporter binding protein YP_001326446.1 811404 D 366394 CDS YP_001326447.1 150395980 5321593 812527..813360 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7677 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 813360 5321593 Smed_0756 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326447.1 812527 D 366394 CDS YP_001326448.1 150395981 5321594 813363..814160 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr7678 ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 814160 5321594 Smed_0757 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326448.1 813363 D 366394 CDS YP_001326449.1 150395982 5321595 814327..815214 1 NC_009636.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: sme:SMc00576 hypothetical protein; hypothetical protein 815214 5321595 Smed_0758 Sinorhizobium medicae WSM419 hypothetical protein YP_001326449.1 814327 D 366394 CDS YP_001326450.1 150395983 5321596 815218..815877 1 NC_009636.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 815877 gmk 5321596 gmk Sinorhizobium medicae WSM419 guanylate kinase YP_001326450.1 815218 D 366394 CDS YP_001326451.1 150395984 5321597 complement(815897..816721) 1 NC_009636.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 816721 ksgA 5321597 ksgA Sinorhizobium medicae WSM419 dimethyladenosine transferase YP_001326451.1 815897 R 366394 CDS YP_001326452.1 150395985 5321598 complement(816721..817749) 1 NC_009636.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 817749 pdxA 5321598 pdxA Sinorhizobium medicae WSM419 4-hydroxythreonine-4-phosphate dehydrogenase YP_001326452.1 816721 R 366394 CDS YP_001326453.1 150395986 5321599 complement(817759..818706) 1 NC_009636.1 PFAM: SurA domain; KEGG: sme:SMc00581 putative survival protein surA precursor (peptidyl-prolyl cis-trans isomerase SurA); SurA domain-containing protein 818706 5321599 Smed_0762 Sinorhizobium medicae WSM419 SurA domain-containing protein YP_001326453.1 817759 R 366394 CDS YP_001326454.1 150395987 5321600 complement(818890..821235) 1 NC_009636.1 PFAM: Organic solvent tolerance protein; KEGG: sme:SMc00582 organic solvent tolerance protein; organic solvent tolerance protein 821235 5321600 Smed_0763 Sinorhizobium medicae WSM419 organic solvent tolerance protein YP_001326454.1 818890 R 366394 CDS YP_001326455.1 150395988 5321601 complement(821235..822317) 1 NC_009636.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sme:SMc00583 hypothetical, transmembrane protein; YjgP/YjgQ family permease 822317 5321601 Smed_0764 Sinorhizobium medicae WSM419 YjgP/YjgQ family permease YP_001326455.1 821235 R 366394 CDS YP_001326456.1 150395989 5321602 complement(822314..823486) 1 NC_009636.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sme:SMc00584 hypothetical transmembrane protein; YjgP/YjgQ family permease 823486 5321602 Smed_0765 Sinorhizobium medicae WSM419 YjgP/YjgQ family permease YP_001326456.1 822314 R 366394 CDS YP_001326457.1 150395990 5321603 823801..825294 1 NC_009636.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 825294 5321603 Smed_0766 Sinorhizobium medicae WSM419 leucyl aminopeptidase YP_001326457.1 823801 D 366394 CDS YP_001326458.1 150395991 5321604 825314..825763 1 NC_009636.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 825763 5321604 Smed_0767 Sinorhizobium medicae WSM419 DNA polymerase III subunit chi YP_001326458.1 825314 D 366394 CDS YP_001326459.1 150395992 5321605 complement(825863..826789) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc00588 putative D-galactose 1-dehydrogenase protein; galactose 1-dehydrogenase 826789 5321605 Smed_0768 Sinorhizobium medicae WSM419 galactose 1-dehydrogenase YP_001326459.1 825863 R 366394 CDS YP_001326460.1 150395993 5321606 826902..827828 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00589 hypothetical protein; N-acetyltransferase GCN5 827828 5321606 Smed_0769 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326460.1 826902 D 366394 CDS YP_001326461.1 150395994 5321607 complement(827883..829772) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00590 putative ABC transporter ATP-binding protein; ABC transporter-like protein 829772 5321607 Smed_0770 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326461.1 827883 R 366394 CDS YP_001326462.1 150395995 5321608 830084..830359 1 NC_009636.1 KEGG: sme:SMc00591 hypothetical/unknown signal peptide protein; hypothetical protein 830359 5321608 Smed_0771 Sinorhizobium medicae WSM419 hypothetical protein YP_001326462.1 830084 D 366394 CDS YP_001326463.1 150395996 5321609 830628..833291 1 NC_009636.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMc00592 hypothetical, transmembrane protein; AMP-dependent synthetase and ligase 833291 5321609 Smed_0772 Sinorhizobium medicae WSM419 AMP-dependent synthetase and ligase YP_001326463.1 830628 D 366394 CDS YP_001326464.1 150395997 5321610 complement(833232..833744) 1 NC_009636.1 PFAM: DinB family protein; KEGG: sme:SMc00593 hypothetical protein; DinB family protein 833744 5321610 Smed_0773 Sinorhizobium medicae WSM419 DinB family protein YP_001326464.1 833232 R 366394 CDS YP_001326465.1 150395998 5321611 834066..834755 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00594 putative beta-etherase (beta-aryl ether cleaving enzyme) protein; glutathione S-transferase domain-containing protein 834755 5321611 Smed_0774 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326465.1 834066 D 366394 CDS YP_001326466.1 150395999 5321612 834856..835278 1 NC_009636.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 835278 ndk 5321612 ndk Sinorhizobium medicae WSM419 nucleoside diphosphate kinase YP_001326466.1 834856 D 366394 CDS YP_001326467.1 150396000 5321613 complement(835327..835830) 1 NC_009636.1 KEGG: sme:SMc00596 hypothetical protein; hypothetical protein 835830 5321613 Smed_0776 Sinorhizobium medicae WSM419 hypothetical protein YP_001326467.1 835327 R 366394 CDS YP_001326468.1 150396001 5321614 complement(835827..836387) 1 NC_009636.1 PFAM: protein of unknown function DUF1470; KEGG: sme:SMc00597 hypothetical protein; hypothetical protein 836387 5321614 Smed_0777 Sinorhizobium medicae WSM419 hypothetical protein YP_001326468.1 835827 R 366394 CDS YP_001326469.1 150396002 5321615 836577..837473 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc00598 putative branched-chain amino acid transport permease protein; inner-membrane translocator 837473 5321615 Smed_0778 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001326469.1 836577 D 366394 CDS YP_001326470.1 150396003 5321616 complement(837511..837981) 1 NC_009636.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: sme:SMc00599 probable molybdopterin MPT converting factor, subunit 2 protein; molybdopterin biosynthesis protein MoaE 837981 5321616 Smed_0779 Sinorhizobium medicae WSM419 molybdopterin biosynthesis protein MoaE YP_001326470.1 837511 R 366394 CDS YP_001326471.1 150396004 5321617 complement(837986..838246) 1 NC_009636.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: sme:SMc00600 probable molybdopterin MPT converting factor, subunit 1 protein; molybdopterin converting factor subunit 1 838246 5321617 Smed_0780 Sinorhizobium medicae WSM419 molybdopterin converting factor subunit 1 YP_001326471.1 837986 R 366394 CDS YP_001326472.1 150396005 5321618 complement(838243..838830) 1 NC_009636.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc00601 probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 838830 5321618 Smed_0781 Sinorhizobium medicae WSM419 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001326472.1 838243 R 366394 CDS YP_001326473.1 150396006 5321619 complement(839083..841107) 1 NC_009636.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 841107 uvrC 5321619 uvrC Sinorhizobium medicae WSM419 excinuclease ABC subunit C YP_001326473.1 839083 R 366394 CDS YP_001326474.1 150396007 5321620 complement(841104..841868) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00603 short chain dehydrogenase; short chain dehydrogenase 841868 5321620 Smed_0783 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001326474.1 841104 R 366394 CDS YP_001326475.1 150396008 5321621 842231..842869 1 NC_009636.1 PFAM: porin; KEGG: sme:SMc00604 probable outer membrane protein; porin 842869 5321621 Smed_0784 Sinorhizobium medicae WSM419 porin YP_001326475.1 842231 D 366394 CDS YP_001326476.1 150396009 5321622 complement(842958..843566) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00605 hypothetical zinc finger domain C2H2 type protein; glutathione S-transferase domain-containing protein 843566 5321622 Smed_0785 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001326476.1 842958 R 366394 CDS YP_001326477.1 150396010 5321623 complement(843563..844321) 1 NC_009636.1 PFAM: ribonuclease T2; KEGG: sme:SMc00606 putative ribonuclease protein; ribonuclease T2 844321 5321623 Smed_0786 Sinorhizobium medicae WSM419 ribonuclease T2 YP_001326477.1 843563 R 366394 CDS YP_001326478.1 150396011 5321624 complement(844375..844818) 1 NC_009636.1 KEGG: sme:SMc00607 hypothetical signal peptide protein; putative signal peptide protein 844818 5321624 Smed_0787 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326478.1 844375 R 366394 CDS YP_001326479.1 150396012 5321625 complement(844870..845739) 1 NC_009636.1 PFAM: protein of unknown function DUF519; KEGG: sme:SMc00608 hypothetical protein; hypothetical protein 845739 5321625 Smed_0788 Sinorhizobium medicae WSM419 hypothetical protein YP_001326479.1 844870 R 366394 CDS YP_001326480.1 150396013 5321626 845808..847940 1 NC_009636.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMc00609 putative anaerobic dimethyl sulfoxide reductase chain A protein; nitrate reductase 847940 5321626 Smed_0789 Sinorhizobium medicae WSM419 nitrate reductase YP_001326480.1 845808 D 366394 CDS YP_001326481.1 150396014 5321627 847968..848564 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc00610 hypothetical protein; NUDIX hydrolase 848564 5321627 Smed_0790 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001326481.1 847968 D 366394 CDS YP_001326482.1 150396015 5321628 complement(848625..849287) 1 NC_009636.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 849287 purN 5321628 purN Sinorhizobium medicae WSM419 phosphoribosylglycinamide formyltransferase YP_001326482.1 848625 R 366394 CDS YP_001326483.1 150396016 5321629 complement(849318..850388) 1 NC_009636.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 850388 5321629 Smed_0792 Sinorhizobium medicae WSM419 phosphoribosylaminoimidazole synthetase YP_001326483.1 849318 R 366394 CDS YP_001326484.1 150396017 5321630 850609..851748 1 NC_009636.1 PFAM: protein of unknown function UPF0118; KEGG: sme:SMc00616 putative permease protein; hypothetical protein 851748 5321630 Smed_0793 Sinorhizobium medicae WSM419 hypothetical protein YP_001326484.1 850609 D 366394 CDS YP_001326485.1 150396018 5321631 851983..852672 1 NC_009636.1 KEGG: sme:SMc00617 hypothetical protein; hypothetical protein 852672 5321631 Smed_0794 Sinorhizobium medicae WSM419 hypothetical protein YP_001326485.1 851983 D 366394 CDS YP_001326486.1 150396019 5321632 852737..854947 1 NC_009636.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 854947 5321632 Smed_0795 Sinorhizobium medicae WSM419 polyphosphate kinase YP_001326486.1 852737 D 366394 CDS YP_001326487.1 150396020 5321633 854958..856481 1 NC_009636.1 PFAM: Ppx/GppA phosphatase; KEGG: sme:SMc00619 hypothetical protein; Ppx/GppA phosphatase 856481 5321633 Smed_0796 Sinorhizobium medicae WSM419 Ppx/GppA phosphatase YP_001326487.1 854958 D 366394 CDS YP_001326488.1 150396021 5321634 complement(856612..857970) 1 NC_009636.1 KEGG: sme:SMc00620 hypothetical signal peptide protein; putative signal peptide protein 857970 5321634 Smed_0797 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326488.1 856612 R 366394 CDS YP_001326489.1 150396022 5321635 complement(858040..859122) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc00621 adenylate cyclase 2 protein; putative adenylate/guanylate cyclase 859122 5321635 Smed_0798 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001326489.1 858040 R 366394 CDS YP_001326490.1 150396023 5321636 complement(859173..860324) 1 NC_009636.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: sme:SMc00622 probable ribonuclease D protein; ribonuclease D 860324 5321636 Smed_0799 Sinorhizobium medicae WSM419 ribonuclease D YP_001326490.1 859173 R 366394 CDS YP_001326491.1 150396024 5321637 complement(860428..861828) 1 NC_009636.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: sme:SMc01754 putative oxidoreductase protein; multicopper oxidase type 3 861828 5321637 Smed_0800 Sinorhizobium medicae WSM419 multicopper oxidase type 3 YP_001326491.1 860428 R 366394 CDS YP_001326492.1 150396025 5321638 complement(861962..863197) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01755 putative transport transmembrane protein; major facilitator superfamily transporter 863197 5321638 Smed_0801 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326492.1 861962 R 366394 CDS YP_001326493.1 150396026 5321639 863504..865291 1 NC_009636.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 865291 aspS 5321639 aspS Sinorhizobium medicae WSM419 aspartyl-tRNA synthetase YP_001326493.1 863504 D 366394 CDS YP_001326494.1 150396027 5321640 865543..866475 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 866475 5321640 Smed_0803 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001326494.1 865543 D 366394 CDS YP_001326495.1 150396028 5321641 complement(866544..868172) 1 NC_009636.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; chaperonin GroEL 868172 groEL 5321641 groEL Sinorhizobium medicae WSM419 chaperonin GroEL YP_001326495.1 866544 R 366394 CDS YP_001326496.1 150396029 5321642 complement(868282..868500) 1 NC_009636.1 KEGG: sme:SMc01759 hypothetical protein; hypothetical protein 868500 5321642 Smed_0805 Sinorhizobium medicae WSM419 hypothetical protein YP_001326496.1 868282 R 366394 CDS YP_001326497.1 150396030 5321643 complement(868688..869881) 1 NC_009636.1 KEGG: sme:SMc01760 hypothetical protein; hypothetical protein 869881 5321643 Smed_0806 Sinorhizobium medicae WSM419 hypothetical protein YP_001326497.1 868688 R 366394 CDS YP_001326498.1 150396031 5321644 870115..872391 1 NC_009636.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 872391 5321644 Smed_0807 Sinorhizobium medicae WSM419 DNA topoisomerase IV subunit A YP_001326498.1 870115 D 366394 CDS YP_001326499.1 150396032 5321645 872533..872871 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc01762 putative transcription regulator protein; regulatory protein ArsR 872871 5321645 Smed_0808 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001326499.1 872533 D 366394 CDS YP_001326500.1 150396033 5321646 complement(872982..873884) 1 NC_009636.1 KEGG: sme:SMc01763 hypothetical protein; hypothetical protein 873884 5321646 Smed_0809 Sinorhizobium medicae WSM419 hypothetical protein YP_001326500.1 872982 R 366394 CDS YP_001326501.1 150396034 5321647 complement(873888..874667) 1 NC_009636.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 874667 5321647 Smed_0810 Sinorhizobium medicae WSM419 arginyl-tRNA-protein transferase YP_001326501.1 873888 R 366394 CDS YP_001326502.1 150396035 5321648 complement(874763..875227) 1 NC_009636.1 PFAM: RDD domain containing protein; KEGG: sme:SMc01765 hypothetical protein; RDD domain-containing protein 875227 5321648 Smed_0811 Sinorhizobium medicae WSM419 RDD domain-containing protein YP_001326502.1 874763 R 366394 CDS YP_001326503.1 150396036 5321649 complement(875350..876363) 1 NC_009636.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 876363 5321649 Smed_0812 Sinorhizobium medicae WSM419 delta-aminolevulinic acid dehydratase YP_001326503.1 875350 R 366394 CDS YP_001326504.1 150396037 5321650 876476..876979 1 NC_009636.1 KEGG: sme:SMc01767 hypothetical protein; hypothetical protein 876979 5321650 Smed_0813 Sinorhizobium medicae WSM419 hypothetical protein YP_001326504.1 876476 D 366394 CDS YP_001326505.1 150396038 5321651 877110..877622 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc01768 putative transcription regulator protein; MarR family transcriptional regulator 877622 5321651 Smed_0814 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001326505.1 877110 D 366394 CDS YP_001326506.1 150396039 5321652 878050..879381 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sme:SMc01769 hypothetical protein; peptidoglycan binding domain-containing protein 879381 5321652 Smed_0815 Sinorhizobium medicae WSM419 peptidoglycan binding domain-containing protein YP_001326506.1 878050 D 366394 CDS YP_001326507.1 150396040 5321653 879563..880858 1 NC_009636.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 880858 glyA 5321653 glyA Sinorhizobium medicae WSM419 serine hydroxymethyltransferase YP_001326507.1 879563 D 366394 CDS YP_001326508.1 150396041 5321654 880871..881344 1 NC_009636.1 PFAM: ATP-cone domain protein; KEGG: sme:SMc01771 ATP-cone domain protein; transcriptional regulator NrdR 881344 nrdR 5321654 nrdR Sinorhizobium medicae WSM419 transcriptional regulator NrdR YP_001326508.1 880871 D 366394 CDS YP_001326509.1 150396042 5321655 881361..882557 1 NC_009636.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: sme:SMc01772 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase; riboflavin biosynthesis protein RibD 882557 5321655 Smed_0818 Sinorhizobium medicae WSM419 riboflavin biosynthesis protein RibD YP_001326509.1 881361 D 366394 CDS YP_001326510.1 150396043 5321656 882557..883177 1 NC_009636.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 883177 5321656 Smed_0819 Sinorhizobium medicae WSM419 riboflavin synthase subunit alpha YP_001326510.1 882557 D 366394 CDS YP_001326511.1 150396044 5321657 complement(883300..883842) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01775 putative acetyltransferase protein; N-acetyltransferase GCN5 883842 5321657 Smed_0820 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326511.1 883300 R 366394 CDS YP_001326512.1 150396045 5321658 884070..884531 1 NC_009636.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 884531 ribH 5321658 ribH Sinorhizobium medicae WSM419 6,7-dimethyl-8-ribityllumazine synthase YP_001326512.1 884070 D 366394 CDS YP_001326513.1 150396046 5321659 884528..885010 1 NC_009636.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 885010 nusB 5321659 nusB Sinorhizobium medicae WSM419 transcription antitermination protein NusB YP_001326513.1 884528 D 366394 CDS YP_001326514.1 150396047 5321660 885017..886243 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01779 putative transport transmembrane protein; major facilitator superfamily transporter 886243 5321660 Smed_0823 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326514.1 885017 D 366394 CDS YP_001326515.1 150396048 5321661 886442..888577 1 NC_009636.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 888577 hppA 5321661 hppA Sinorhizobium medicae WSM419 membrane-bound proton-translocating pyrophosphatase YP_001326515.1 886442 D 366394 CDS YP_001326516.1 150396049 5321662 complement(888702..889208) 1 NC_009636.1 PFAM: SmpA/OmlA domain protein; KEGG: sme:SMc01781 hypothetical protein; SmpA/OmlA domain-containing protein 889208 5321662 Smed_0825 Sinorhizobium medicae WSM419 SmpA/OmlA domain-containing protein YP_001326516.1 888702 R 366394 CDS YP_001326517.1 150396050 5321663 889366..889902 1 NC_009636.1 PFAM: Ubiquinol-cytochrome C chaperone; KEGG: sme:SMc01782 hypothetical protein; ubiquinol-cytochrome C chaperone 889902 5321663 Smed_0826 Sinorhizobium medicae WSM419 ubiquinol-cytochrome C chaperone YP_001326517.1 889366 D 366394 CDS YP_001326518.1 150396051 5321664 889986..890537 1 NC_009636.1 KEGG: sme:SMc01783 hypothetical protein; hypothetical protein 890537 5321664 Smed_0827 Sinorhizobium medicae WSM419 hypothetical protein YP_001326518.1 889986 D 366394 CDS YP_001326519.1 150396052 5321665 890733..891776 1 NC_009636.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 891776 5321665 Smed_0828 Sinorhizobium medicae WSM419 putative glycerol-3-phosphate acyltransferase PlsX YP_001326519.1 890733 D 366394 CDS YP_001326520.1 150396053 5321666 891795..892766 1 NC_009636.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 892766 5321666 Smed_0829 Sinorhizobium medicae WSM419 3-oxoacyl-ACP synthase YP_001326520.1 891795 D 366394 CDS YP_001326521.1 150396054 5321667 892860..893198 1 NC_009636.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 893198 ihfA 5321667 ihfA Sinorhizobium medicae WSM419 integration host factor subunit alpha YP_001326521.1 892860 D 366394 CDS YP_001326522.1 150396055 5321668 893328..893861 1 NC_009636.1 PFAM: regulatory protein MerR; KEGG: sme:SMc01787 putative transcription regulator protein; MerR family transcriptional regulator 893861 5321668 Smed_0831 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001326522.1 893328 D 366394 CDS YP_001326523.1 150396056 5321669 complement(893929..894276) 1 NC_009636.1 KEGG: sme:SMc01788 hypothetical protein; hypothetical protein 894276 5321669 Smed_0832 Sinorhizobium medicae WSM419 hypothetical protein YP_001326523.1 893929 R 366394 CDS YP_001326524.1 150396057 5321671 894514..894891 1 NC_009636.1 hypothetical protein 894891 5321671 Smed_0833 Sinorhizobium medicae WSM419 hypothetical protein YP_001326524.1 894514 D 366394 CDS YP_001326525.1 150396058 5321672 895430..895567 1 NC_009636.1 hypothetical protein 895567 5321672 Smed_0834 Sinorhizobium medicae WSM419 hypothetical protein YP_001326525.1 895430 D 366394 CDS YP_001326526.1 150396059 5321673 895658..896281 1 NC_009636.1 hypothetical protein 896281 5321673 Smed_0835 Sinorhizobium medicae WSM419 hypothetical protein YP_001326526.1 895658 D 366394 CDS YP_001326527.1 150396060 5321674 896291..897025 1 NC_009636.1 hypothetical protein 897025 5321674 Smed_0836 Sinorhizobium medicae WSM419 hypothetical protein YP_001326527.1 896291 D 366394 CDS YP_001326528.1 150396061 5321675 complement(897326..897547) 1 NC_009636.1 hypothetical protein 897547 5321675 Smed_0837 Sinorhizobium medicae WSM419 hypothetical protein YP_001326528.1 897326 R 366394 CDS YP_001326529.1 150396062 5321676 complement(897544..898164) 1 NC_009636.1 hypothetical protein 898164 5321676 Smed_0838 Sinorhizobium medicae WSM419 hypothetical protein YP_001326529.1 897544 R 366394 CDS YP_001326530.1 150396063 5321677 complement(898469..899362) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0557 LysR family transcriptional regulator, probable; LysR family transcriptional regulator 899362 5321677 Smed_0839 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326530.1 898469 R 366394 CDS YP_001326531.1 150396064 5321678 899489..899878 1 NC_009636.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sme:SMa0558 hypothetical protein; antibiotic biosynthesis monooxygenase 899878 5321678 Smed_0840 Sinorhizobium medicae WSM419 antibiotic biosynthesis monooxygenase YP_001326531.1 899489 D 366394 CDS YP_001326532.1 150396065 5321679 899914..900327 1 NC_009636.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: atu:Atu0206 hypothetical protein; antibiotic biosynthesis monooxygenase 900327 5321679 Smed_0841 Sinorhizobium medicae WSM419 antibiotic biosynthesis monooxygenase YP_001326532.1 899914 D 366394 CDS YP_001326533.1 150396066 5321680 900347..901519 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: bfr:BF2073 probable aldo/keto reductase; aldo/keto reductase 901519 5321680 Smed_0842 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001326533.1 900347 D 366394 CDS YP_001326534.1 150396067 5321681 901594..902373 1 NC_009636.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMa0559 4-carboxymuconolactone decarboxylase, putative; carboxymuconolactone decarboxylase 902373 5321681 Smed_0843 Sinorhizobium medicae WSM419 carboxymuconolactone decarboxylase YP_001326534.1 901594 D 366394 CDS YP_001326535.1 150396068 5321682 902527..902901 1 NC_009636.1 KEGG: sme:SMa0561 hypothetical protein; hypothetical protein 902901 5321682 Smed_0844 Sinorhizobium medicae WSM419 hypothetical protein YP_001326535.1 902527 D 366394 CDS YP_001326536.1 150396069 5321684 903957..905057 1 NC_009636.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sme:SMa0564 conserved hypothetical protein, possible oxidoreductase; glucose sorbosone dehydrogenase 905057 5321684 Smed_0846 Sinorhizobium medicae WSM419 glucose sorbosone dehydrogenase YP_001326536.1 903957 D 366394 CDS YP_001326537.1 150396070 5321685 905146..905607 1 NC_009636.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:bll4598 hypothetical protein; cupin 905607 5321685 Smed_0847 Sinorhizobium medicae WSM419 cupin YP_001326537.1 905146 D 366394 CDS YP_001326538.1 150396071 5321686 complement(905941..906114) 1 NC_009636.1 hypothetical protein 906114 5321686 Smed_0848 Sinorhizobium medicae WSM419 hypothetical protein YP_001326538.1 905941 R 366394 CDS YP_001326539.1 150396072 5321687 906704..907738 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rle:pRL110382 putative D-xylulose reductase; alcohol dehydrogenase 907738 5321687 Smed_0849 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001326539.1 906704 D 366394 CDS YP_001326540.1 150396073 5321688 complement(907846..909126) 1 NC_009636.1 KEGG: sme:SMc01791 hypothetical protein; hypothetical protein 909126 5321688 Smed_0850 Sinorhizobium medicae WSM419 hypothetical protein YP_001326540.1 907846 R 366394 CDS YP_001326541.1 150396074 5321689 complement(909123..910766) 1 NC_009636.1 PFAM: sugar transferase; KEGG: sme:SMc01792 putative sugar transferase protein; undecaprenyl-phosphate galactose phosphotransferase 910766 5321689 Smed_0851 Sinorhizobium medicae WSM419 undecaprenyl-phosphate galactose phosphotransferase YP_001326541.1 909123 R 366394 CDS YP_001326542.1 150396075 5321690 complement(910744..911913) 1 NC_009636.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMc01793 putative glycosyltransferase protein; group 1 glycosyl transferase 911913 5321690 Smed_0852 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001326542.1 910744 R 366394 CDS YP_001326543.1 150396076 5321691 complement(911919..912494) 1 NC_009636.1 PFAM: polysaccharide export protein; KEGG: sme:SMc01794 putative polysaccharide export system periplasmic transmembrane protein; polysaccharide export protein 912494 5321691 Smed_0853 Sinorhizobium medicae WSM419 polysaccharide export protein YP_001326543.1 911919 R 366394 CDS YP_001326544.1 150396077 5321692 912695..914824 1 NC_009636.1 TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMc01795 putative polysaccharide synthesis/transport transmembrane protein; exopolysaccharide transport family protein 914824 5321692 Smed_0854 Sinorhizobium medicae WSM419 exopolysaccharide transport family protein YP_001326544.1 912695 D 366394 CDS YP_001326545.1 150396078 5321693 complement(914880..916130) 1 NC_009636.1 KEGG: sme:SMc01796 hypothetical protein; hypothetical protein 916130 5321693 Smed_0855 Sinorhizobium medicae WSM419 hypothetical protein YP_001326545.1 914880 R 366394 CDS YP_001326546.1 150396079 5321694 complement(916281..917021) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc01798 hypothetical protein; metallophosphoesterase 917021 5321694 Smed_0856 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001326546.1 916281 R 366394 CDS YP_001326547.1 150396080 5321695 complement(917041..917265) 1 NC_009636.1 KEGG: sme:SMc01799 conserved hypothetical signal peptide protein; putative signal peptide protein 917265 5321695 Smed_0857 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326547.1 917041 R 366394 CDS YP_001326548.1 150396081 5321696 917444..918547 1 NC_009636.1 PFAM: cytochrome oxidase assembly; KEGG: sme:SMc01800 putative cytochrome C oxidase assembly transmembrane protein; cytochrome oxidase assembly 918547 5321696 Smed_0858 Sinorhizobium medicae WSM419 cytochrome oxidase assembly YP_001326548.1 917444 D 366394 CDS YP_001326549.1 150396082 5321697 complement(918620..919552) 1 NC_009636.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 919552 5321697 Smed_0859 Sinorhizobium medicae WSM419 N-acetyl-gamma-glutamyl-phosphate reductase YP_001326549.1 918620 R 366394 CDS YP_001326550.1 150396083 5321698 complement(919646..920602) 1 NC_009636.1 catalyzes the formation of putrescine from agmatine; agmatinase 920602 5321698 Smed_0860 Sinorhizobium medicae WSM419 agmatinase YP_001326550.1 919646 R 366394 CDS YP_001326551.1 150396084 5321699 complement(920755..921222) 1 NC_009636.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 921222 rpsI 5321699 rpsI Sinorhizobium medicae WSM419 30S ribosomal protein S9 YP_001326551.1 920755 R 366394 CDS YP_001326552.1 150396085 5321700 complement(921225..921689) 1 NC_009636.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 921689 rplM 5321700 rplM Sinorhizobium medicae WSM419 50S ribosomal protein L13 YP_001326552.1 921225 R 366394 CDS YP_001326553.1 150396086 5321701 complement(921895..922338) 1 NC_009636.1 PFAM: thioesterase superfamily protein; KEGG: sme:SMc01805 hypothetical protein; thioesterase superfamily protein 922338 5321701 Smed_0863 Sinorhizobium medicae WSM419 thioesterase superfamily protein YP_001326553.1 921895 R 366394 CDS YP_001326554.1 150396087 5321702 922502..923323 1 NC_009636.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 923323 5321702 Smed_0864 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001326554.1 922502 D 366394 CDS YP_001326555.1 150396088 5321703 complement(923387..924274) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc01807 hypothetical protein; hypothetical protein 924274 5321703 Smed_0865 Sinorhizobium medicae WSM419 hypothetical protein YP_001326555.1 923387 R 366394 CDS YP_001326556.1 150396089 5321704 924507..924941 1 NC_009636.1 PFAM: CoA-binding domain protein; KEGG: sme:SMc01808 hypothetical protein; CoA-binding domain-containing protein 924941 5321704 Smed_0866 Sinorhizobium medicae WSM419 CoA-binding domain-containing protein YP_001326556.1 924507 D 366394 CDS YP_001326557.1 150396090 5321705 924979..926259 1 NC_009636.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 926259 5321705 Smed_0867 Sinorhizobium medicae WSM419 O-acetylhomoserine aminocarboxypropyltransferase YP_001326557.1 924979 D 366394 CDS YP_001326558.1 150396091 5321706 926286..926627 1 NC_009636.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: sme:SMc01810 hypothetical protein; hypothetical protein 926627 5321706 Smed_0868 Sinorhizobium medicae WSM419 hypothetical protein YP_001326558.1 926286 D 366394 CDS YP_001326559.1 150396092 5321707 complement(926689..927936) 1 NC_009636.1 PFAM: cytochrome P450; KEGG: sme:SMc01812 putative cytochrome P450-like monooxygenase protein; cytochrome P450 927936 5321707 Smed_0869 Sinorhizobium medicae WSM419 cytochrome P450 YP_001326559.1 926689 R 366394 CDS YP_001326560.1 150396093 5321708 928108..928971 1 NC_009636.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMc01813 hypothetical protein; endonuclease/exonuclease/phosphatase 928971 5321708 Smed_0870 Sinorhizobium medicae WSM419 endonuclease/exonuclease/phosphatase YP_001326560.1 928108 D 366394 CDS YP_001326561.1 150396094 5321709 929076..930638 1 NC_009636.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: sme:SMc04448 hypothetical protein; phospholipase D/transphosphatidylase 930638 5321709 Smed_0871 Sinorhizobium medicae WSM419 phospholipase D/transphosphatidylase YP_001326561.1 929076 D 366394 CDS YP_001326562.1 150396095 5321710 930911..931537 1 NC_009636.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 931537 clpP 5321710 clpP Sinorhizobium medicae WSM419 ATP-dependent Clp protease proteolytic subunit YP_001326562.1 930911 D 366394 CDS YP_001326563.1 150396096 5321711 931831..933108 1 NC_009636.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 933108 clpX 5321711 clpX Sinorhizobium medicae WSM419 ATP-dependent protease ATP-binding subunit ClpX YP_001326563.1 931831 D 366394 CDS YP_001326564.1 150396097 5321712 933551..935971 1 NC_009636.1 KEGG: sme:SMc01905 probable ATP-dependent protease LA protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 935971 5321712 Smed_0874 Sinorhizobium medicae WSM419 ATP-dependent protease La YP_001326564.1 933551 D 366394 CDS YP_001326565.1 150396098 5321713 936193..936465 1 NC_009636.1 PFAM: histone family protein DNA-binding protein; KEGG: sme:SMc01906 histone-like protein; histone family protein DNA-binding protein 936465 5321713 Smed_0875 Sinorhizobium medicae WSM419 histone family protein DNA-binding protein YP_001326565.1 936193 D 366394 CDS YP_001326566.1 150396099 5321714 936710..938905 1 NC_009636.1 KEGG: sme:SMc01907 hypothetical protein; hypothetical protein 938905 5321714 Smed_0876 Sinorhizobium medicae WSM419 hypothetical protein YP_001326566.1 936710 D 366394 CDS YP_001326567.1 150396100 5321715 complement(939006..939485) 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc01908 putative transcription regulator protein; MarR family transcriptional regulator 939485 5321715 Smed_0877 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001326567.1 939006 R 366394 CDS YP_001326568.1 150396101 5321716 939774..941051 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc01909 hypothetical protein; metallophosphoesterase 941051 5321716 Smed_0878 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001326568.1 939774 D 366394 CDS YP_001326569.1 150396102 5321717 941051..944512 1 NC_009636.1 KEGG: sme:SMc01910 hypothetical protein; hypothetical protein 944512 5321717 Smed_0879 Sinorhizobium medicae WSM419 hypothetical protein YP_001326569.1 941051 D 366394 CDS YP_001326570.1 150396103 5321718 944588..944986 1 NC_009636.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sme:SMc01911 hypothetical protein; cupin 944986 5321718 Smed_0880 Sinorhizobium medicae WSM419 cupin YP_001326570.1 944588 D 366394 CDS YP_001326571.1 150396104 5321719 945065..945367 1 NC_009636.1 KEGG: mes:Meso_4324 Rv0623-like transcription factor; hypothetical protein 945367 5321719 Smed_0881 Sinorhizobium medicae WSM419 hypothetical protein YP_001326571.1 945065 D 366394 CDS YP_001326572.1 150396105 5321720 945395..945748 1 NC_009636.1 hypothetical protein 945748 5321720 Smed_0882 Sinorhizobium medicae WSM419 hypothetical protein YP_001326572.1 945395 D 366394 CDS YP_001326573.1 150396106 5321721 complement(945840..947315) 1 NC_009636.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bja:bll6292 probable Hemolysin secretion protein D; HlyD family type I secretion membrane fusion protein 947315 5321721 Smed_0883 Sinorhizobium medicae WSM419 HlyD family type I secretion membrane fusion protein YP_001326573.1 945840 R 366394 CDS YP_001326574.1 150396107 5321722 complement(947312..949492) 1 NC_009636.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: xft:PD1412 toxin secretion ABC transporter ATP-binding protein; type I secretion system ATPase 949492 5321722 Smed_0884 Sinorhizobium medicae WSM419 type I secretion system ATPase YP_001326574.1 947312 R 366394 CDS YP_001326575.1 150396108 5321723 complement(949610..951976) 1 NC_009636.1 KEGG: sil:SPO3673 type I secretion target repeat protein; hypothetical protein 951976 5321723 Smed_0885 Sinorhizobium medicae WSM419 hypothetical protein YP_001326575.1 949610 R 366394 CDS YP_001326576.1 150396109 5321724 complement(951802..958143) 1 NC_009636.1 KEGG: sha:SH0326 hypothetical protein; hypothetical protein 958143 5321724 Smed_0886 Sinorhizobium medicae WSM419 hypothetical protein YP_001326576.1 951802 R 366394 CDS YP_001326577.1 150396110 5321725 complement(958178..958978) 1 NC_009636.1 hypothetical protein 958978 5321725 Smed_0887 Sinorhizobium medicae WSM419 hypothetical protein YP_001326577.1 958178 R 366394 CDS YP_001326578.1 150396111 5321729 960392..960757 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 960757 5321729 Smed_0888 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit A YP_001326578.1 960392 D 366394 CDS YP_001326579.1 150396112 5321730 960748..961326 1 NC_009636.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 961326 5321730 Smed_0889 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit B YP_001326579.1 960748 D 366394 CDS YP_001326580.1 150396113 5321731 961345..961950 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 961950 5321731 Smed_0890 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit C YP_001326580.1 961345 D 366394 CDS YP_001326581.1 150396114 5321732 962007..963197 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 963197 5321732 Smed_0891 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit D YP_001326581.1 962007 D 366394 CDS YP_001326582.1 150396115 5321733 963197..963451 1 NC_009636.1 KEGG: sme:SMc01916 hypothetical signal peptide protein; putative signal peptide protein 963451 5321733 Smed_0892 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001326582.1 963197 D 366394 CDS YP_001326583.1 150396116 5321734 963468..964289 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 964289 5321734 Smed_0893 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit E YP_001326583.1 963468 D 366394 CDS YP_001326584.1 150396117 5321735 964304..965608 1 NC_009636.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 965608 5321735 Smed_0894 Sinorhizobium medicae WSM419 NADH dehydrogenase I subunit F YP_001326584.1 964304 D 366394 CDS YP_001326585.1 150396118 5321736 965614..966276 1 NC_009636.1 KEGG: sme:SMc01919 putative NADH dehydrogenase I chain E; putative NADH dehydrogenase I chain E 966276 5321736 Smed_0895 Sinorhizobium medicae WSM419 putative NADH dehydrogenase I chain E YP_001326585.1 965614 D 366394 CDS YP_001326586.1 150396119 5321737 966399..968480 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 968480 5321737 Smed_0896 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit G YP_001326586.1 966399 D 366394 CDS YP_001326587.1 150396120 5321738 968501..969544 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 969544 5321738 Smed_0897 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit H YP_001326587.1 968501 D 366394 CDS YP_001326588.1 150396121 5321739 969609..970100 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 970100 5321739 Smed_0898 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit I YP_001326588.1 969609 D 366394 CDS YP_001326589.1 150396122 5321740 970197..970865 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 970865 5321740 Smed_0899 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit J YP_001326589.1 970197 D 366394 CDS YP_001326590.1 150396123 5321741 970895..971203 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 971203 5321741 Smed_0900 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit K YP_001326590.1 970895 D 366394 CDS YP_001326591.1 150396124 5321742 971211..973205 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 973205 5321742 Smed_0901 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit L YP_001326591.1 971211 D 366394 CDS YP_001326592.1 150396125 5321743 973205..974716 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 974716 5321743 Smed_0902 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit M YP_001326592.1 973205 D 366394 CDS YP_001326593.1 150396126 5321744 974736..976178 1 NC_009636.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 976178 5321744 Smed_0903 Sinorhizobium medicae WSM419 NADH dehydrogenase subunit N YP_001326593.1 974736 D 366394 CDS YP_001326594.1 150396127 5321745 976175..976942 1 NC_009636.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: sme:SMc01928 probable biotin--[acetyl-CoA-carboxylase] synthetase protein; biotin--acetyl-CoA-carboxylase ligase 976942 5321745 Smed_0904 Sinorhizobium medicae WSM419 biotin--acetyl-CoA-carboxylase ligase YP_001326594.1 976175 D 366394 CDS YP_001326595.1 150396128 5321746 976968..978635 1 NC_009636.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: sme:SMc01929 hypothetical protein; beta-lactamase domain-containing protein 978635 5321746 Smed_0905 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001326595.1 976968 D 366394 CDS YP_001326596.1 150396129 5321747 978692..979096 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01930 hypothetical protein; methylmalonyl-CoA epimerase 979096 5321747 Smed_0906 Sinorhizobium medicae WSM419 methylmalonyl-CoA epimerase YP_001326596.1 978692 D 366394 CDS YP_001326597.1 150396130 5321748 979229..979498 1 NC_009636.1 PFAM: protein of unknown function DUF1467; KEGG: sme:SMc01931 hypothetical protein; hypothetical protein 979498 5321748 Smed_0907 Sinorhizobium medicae WSM419 hypothetical protein YP_001326597.1 979229 D 366394 CDS YP_001326598.1 150396131 5321749 980177..981469 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc01990 putative ferredoxin reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 981469 5321749 Smed_0908 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001326598.1 980177 D 366394 CDS YP_001326599.1 150396132 5321750 complement(981466..981795) 1 NC_009636.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMc01993 putative dioxygenase ferredoxin protein; Rieske (2Fe-2S) domain-containing protein 981795 5321750 Smed_0909 Sinorhizobium medicae WSM419 Rieske (2Fe-2S) domain-containing protein YP_001326599.1 981466 R 366394 CDS YP_001326600.1 150396133 5321751 complement(981897..983138) 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc02016 putative ferredoxin reductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 983138 5321751 Smed_0910 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001326600.1 981897 R 366394 CDS YP_001326601.1 150396134 5321752 complement(983298..984296) 1 NC_009636.1 PFAM: Sterol desaturase; KEGG: sme:SMc02017 hypothetical protein; sterol desaturase 984296 5321752 Smed_0911 Sinorhizobium medicae WSM419 sterol desaturase YP_001326601.1 983298 R 366394 CDS YP_001326602.1 150396135 5321753 complement(984289..984450) 1 NC_009636.1 hypothetical protein 984450 5321753 Smed_0912 Sinorhizobium medicae WSM419 hypothetical protein YP_001326602.1 984289 R 366394 CDS YP_001326603.1 150396136 5321754 complement(984447..985313) 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc02018 hypothetical protein; xylose isomerase domain-containing protein 985313 5321754 Smed_0913 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001326603.1 984447 R 366394 CDS YP_001326604.1 150396137 5321755 complement(985404..986414) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02019 putative permease ABC transporter protein; monosaccharide-transporting ATPase 986414 5321755 Smed_0914 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001326604.1 985404 R 366394 CDS YP_001326605.1 150396138 5321756 complement(986411..987166) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02020 putative ATP binding ABC transporter protein; ABC transporter-like protein 987166 5321756 Smed_0915 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326605.1 986411 R 366394 CDS YP_001326606.1 150396139 5321757 complement(987231..988253) 1 NC_009636.1 KEGG: sme:SMc02021 putative periplasmic binding ABC transporter protein; putative periplasmic binding ABC transporter protein 988253 5321757 Smed_0916 Sinorhizobium medicae WSM419 putative periplasmic binding ABC transporter protein YP_001326606.1 987231 R 366394 CDS YP_001326607.1 150396140 5321758 complement(988586..989578) 1 NC_009636.1 PFAM: regulatory protein LacI; KEGG: sme:SMc02022 putative transcription regulator protein; regulatory protein LacI 989578 5321758 Smed_0917 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001326607.1 988586 R 366394 CDS YP_001326608.1 150396141 5321759 990004..991332 1 NC_009636.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 991332 5321759 Smed_0918 Sinorhizobium medicae WSM419 prolyl-tRNA synthetase YP_001326608.1 990004 D 366394 CDS YP_001326609.1 150396142 5321760 991351..992661 1 NC_009636.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: sme:SMc01935 ABC transporter, permease protein; LolC/E family lipoprotein releasing system, transmembrane protein 992661 5321760 Smed_0919 Sinorhizobium medicae WSM419 LolC/E family lipoprotein releasing system, transmembrane protein YP_001326609.1 991351 D 366394 CDS YP_001326610.1 150396143 5321761 992679..993365 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01376 putative ATP-binding ABC transporter protein; ABC transporter-like protein 993365 5321761 Smed_0920 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326610.1 992679 D 366394 CDS YP_001326611.1 150396144 5321762 993789..997286 1 NC_009636.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 997286 dnaE 5321762 dnaE Sinorhizobium medicae WSM419 DNA polymerase III subunit alpha YP_001326611.1 993789 D 366394 CDS YP_001326612.1 150396145 5321763 complement(997329..998555) 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc01374 hypothetical protein; hypothetical protein 998555 5321763 Smed_0922 Sinorhizobium medicae WSM419 hypothetical protein YP_001326612.1 997329 R 366394 CDS YP_001326613.1 150396146 5321764 complement(998681..999973) 1 NC_009636.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 999973 5321764 Smed_0923 Sinorhizobium medicae WSM419 DNA polymerase IV YP_001326613.1 998681 R 366394 CDS YP_001326614.1 150396147 5321765 complement(1000147..1000419) 1 NC_009636.1 KEGG: sme:SMc01372 hypothetical protein; hypothetical protein 1000419 5321765 Smed_0924 Sinorhizobium medicae WSM419 hypothetical protein YP_001326614.1 1000147 R 366394 CDS YP_001326615.1 150396148 5321766 1000576..1000947 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc01371 putative 2-component receiver domain protein; response regulator receiver protein 1000947 5321766 Smed_0925 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001326615.1 1000576 D 366394 CDS YP_001326616.1 150396149 5321767 1000965..1002332 1 NC_009636.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 1002332 pleD 5321767 pleD Sinorhizobium medicae WSM419 response regulator PleD YP_001326616.1 1000965 D 366394 CDS YP_001326617.1 150396150 5321768 complement(1002858..1003025) 1 NC_009636.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1003025 rpmG 5321768 rpmG Sinorhizobium medicae WSM419 50S ribosomal protein L33 YP_001326617.1 1002858 R 366394 CDS YP_001326618.1 150396151 5321769 complement(1003121..1004305) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01368 putative transport transmembrane protein; major facilitator superfamily transporter 1004305 5321769 Smed_0928 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326618.1 1003121 R 366394 CDS YP_001326619.1 150396152 5321770 complement(1004317..1005033) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc01367 hypothetical protein; NUDIX hydrolase 1005033 5321770 Smed_0929 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001326619.1 1004317 R 366394 CDS YP_001326620.1 150396153 5321771 complement(1005030..1005485) 1 NC_009636.1 PFAM: protein of unknown function DUF983; KEGG: sme:SMc01366 hypothetical protein; hypothetical protein 1005485 5321771 Smed_0930 Sinorhizobium medicae WSM419 hypothetical protein YP_001326620.1 1005030 R 366394 CDS YP_001326621.1 150396154 5321772 complement(1005520..1007889) 1 NC_009636.1 TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; KEGG: sme:SMc01365 putative exoribonuclease II protein; ribonuclease R 1007889 5321772 Smed_0931 Sinorhizobium medicae WSM419 ribonuclease R YP_001326621.1 1005520 R 366394 CDS YP_001326622.1 150396155 5321773 complement(1007892..1010636) 1 NC_009636.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1010636 5321773 Smed_0932 Sinorhizobium medicae WSM419 DNA topoisomerase I YP_001326622.1 1007892 R 366394 CDS YP_001326623.1 150396156 5321774 complement(1010787..1011938) 1 NC_009636.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: sme:SMc01363 DNA processing chain A; DNA protecting protein DprA 1011938 5321774 Smed_0933 Sinorhizobium medicae WSM419 DNA protecting protein DprA YP_001326623.1 1010787 R 366394 CDS YP_001326624.1 150396157 5321775 complement(1011938..1012549) 1 NC_009636.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 1012549 5321775 Smed_0934 Sinorhizobium medicae WSM419 putative glycerol-3-phosphate acyltransferase PlsY YP_001326624.1 1011938 R 366394 CDS YP_001326625.1 150396158 5321776 complement(1012579..1013871) 1 NC_009636.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1013871 5321776 Smed_0935 Sinorhizobium medicae WSM419 dihydroorotase YP_001326625.1 1012579 R 366394 CDS YP_001326626.1 150396159 5321777 complement(1013868..1014809) 1 NC_009636.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1014809 pyrB 5321777 pyrB Sinorhizobium medicae WSM419 aspartate carbamoyltransferase catalytic subunit YP_001326626.1 1013868 R 366394 CDS YP_001326627.1 150396160 5321778 1014994..1016646 1 NC_009636.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMc01359 putative oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 1016646 5321778 Smed_0937 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001326627.1 1014994 D 366394 CDS YP_001326628.1 150396161 5321779 complement(1016628..1017563) 1 NC_009636.1 PFAM: Auxin Efflux Carrier; KEGG: sme:SMc01358 hypothetical transmembrane protein; auxin efflux carrier 1017563 5321779 Smed_0938 Sinorhizobium medicae WSM419 auxin efflux carrier YP_001326628.1 1016628 R 366394 CDS YP_001326629.1 150396162 5321780 1017734..1017916 1 NC_009636.1 KEGG: sme:SMc01357 hypothetical protein; hypothetical protein 1017916 5321780 Smed_0939 Sinorhizobium medicae WSM419 hypothetical protein YP_001326629.1 1017734 D 366394 CDS YP_001326630.1 150396163 5321781 1017913..1018248 1 NC_009636.1 KEGG: sme:SMc01356 hypothetical protein; hypothetical protein 1018248 5321781 Smed_0940 Sinorhizobium medicae WSM419 hypothetical protein YP_001326630.1 1017913 D 366394 CDS YP_001326631.1 150396164 5321782 complement(1018182..1018679) 1 NC_009636.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1018679 5321782 Smed_0941 Sinorhizobium medicae WSM419 Holliday junction resolvase-like protein YP_001326631.1 1018182 R 366394 CDS YP_001326632.1 150396165 5321783 1018798..1019502 1 NC_009636.1 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1019502 5321783 Smed_0942 Sinorhizobium medicae WSM419 metal-dependent hydrolase YP_001326632.1 1018798 D 366394 CDS YP_001326633.1 150396166 5321784 1019598..1019885 1 NC_009636.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1019885 gatC 5321784 gatC Sinorhizobium medicae WSM419 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001326633.1 1019598 D 366394 CDS YP_001326634.1 150396167 5321785 1019935..1021416 1 NC_009636.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1021416 gatA 5321785 gatA Sinorhizobium medicae WSM419 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001326634.1 1019935 D 366394 CDS YP_001326635.1 150396168 5321786 complement(1021519..1021764) 1 NC_009636.1 KEGG: sme:SMc01351 hypothetical protein; hypothetical protein 1021764 5321786 Smed_0945 Sinorhizobium medicae WSM419 hypothetical protein YP_001326635.1 1021519 R 366394 CDS YP_001326636.1 150396169 5321787 1022099..1023601 1 NC_009636.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1023601 gatB 5321787 gatB Sinorhizobium medicae WSM419 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001326636.1 1022099 D 366394 CDS YP_001326637.1 150396170 5321788 1023598..1024101 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01349 hypothetical protein; N-acetyltransferase GCN5 1024101 5321788 Smed_0947 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326637.1 1023598 D 366394 CDS YP_001326638.1 150396171 5321789 1024254..1024649 1 NC_009636.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 1024649 5321789 Smed_0948 Sinorhizobium medicae WSM419 NADH dehydrogenase YP_001326638.1 1024254 D 366394 CDS YP_001326639.1 150396172 5321790 1024832..1025284 1 NC_009636.1 KEGG: sme:SMc01347 hypothetical protein; hypothetical protein 1025284 5321790 Smed_0949 Sinorhizobium medicae WSM419 hypothetical protein YP_001326639.1 1024832 D 366394 CDS YP_001326640.1 150396173 5321792 complement(1025746..1026360) 1 NC_009636.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1026360 aat 5321792 aat Sinorhizobium medicae WSM419 leucyl/phenylalanyl-tRNA--protein transferase YP_001326640.1 1025746 R 366394 CDS YP_001326641.1 150396174 5321793 complement(1026370..1027713) 1 NC_009636.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1027713 5321793 Smed_0952 Sinorhizobium medicae WSM419 acetyl-CoA carboxylase biotin carboxylase subunit YP_001326641.1 1026370 R 366394 CDS YP_001326642.1 150396175 5321794 complement(1027726..1028202) 1 NC_009636.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1028202 5321794 Smed_0953 Sinorhizobium medicae WSM419 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_001326642.1 1027726 R 366394 CDS YP_001326643.1 150396176 5321795 complement(1028226..1028672) 1 NC_009636.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1028672 5321795 Smed_0954 Sinorhizobium medicae WSM419 3-dehydroquinate dehydratase YP_001326643.1 1028226 R 366394 CDS YP_001326644.1 150396177 5321796 complement(1028829..1029596) 1 NC_009636.1 PFAM: DSBA oxidoreductase; KEGG: sme:SMc01342 putative outer membrane protein; DSBA oxidoreductase 1029596 5321796 Smed_0955 Sinorhizobium medicae WSM419 DSBA oxidoreductase YP_001326644.1 1028829 R 366394 CDS YP_001326645.1 150396178 5321798 complement(1031233..1034067) 1 NC_009636.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: sme:SMc01336 probable ribonuclease E protein; ribonuclease 1034067 5321798 Smed_0957 Sinorhizobium medicae WSM419 ribonuclease YP_001326645.1 1031233 R 366394 CDS YP_001326646.1 150396179 5321799 1034324..1034638 1 NC_009636.1 hypothetical protein 1034638 5321799 Smed_0958 Sinorhizobium medicae WSM419 hypothetical protein YP_001326646.1 1034324 D 366394 CDS YP_001326647.1 150396180 5321800 1034795..1036045 1 NC_009636.1 PFAM: cell wall hydrolase/autolysin; KEGG: sme:SMc01335 probable N-acetylmuramoyl-L-alanine amidase amic precursor transmembrane protein; N-acetylmuramoyl-L-alanine amidase 1036045 5321800 Smed_0959 Sinorhizobium medicae WSM419 N-acetylmuramoyl-L-alanine amidase YP_001326647.1 1034795 D 366394 CDS YP_001326648.1 150396181 5321801 1036481..1038934 1 NC_009636.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sme:SMc01334 probable penicillin-binding 1A transmembrane protein; 1A family penicillin-binding protein 1038934 5321801 Smed_0960 Sinorhizobium medicae WSM419 1A family penicillin-binding protein YP_001326648.1 1036481 D 366394 CDS YP_001326649.1 150396182 5321802 1039191..1040219 1 NC_009636.1 catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA; peptide chain release factor 2 1040219 5321802 Smed_0961 Sinorhizobium medicae WSM419 peptide chain release factor 2 YP_001326649.1 1039191 D 366394 CDS YP_001326650.1 150396183 5321803 complement(1040332..1040832) 1 NC_009636.1 KEGG: sme:SMc01332 hypothetical/unknown protein; hypothetical protein 1040832 5321803 Smed_0962 Sinorhizobium medicae WSM419 hypothetical protein YP_001326650.1 1040332 R 366394 CDS YP_001326651.1 150396184 5321804 complement(1040919..1041692) 1 NC_009636.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1041692 ppnK 5321804 ppnK Sinorhizobium medicae WSM419 inorganic polyphosphate/ATP-NAD kinase YP_001326651.1 1040919 R 366394 CDS YP_001326652.1 150396185 5321806 1042293..1042661 1 NC_009636.1 KEGG: mlo:mll2032 hypothetical protein; hypothetical protein 1042661 5321806 Smed_0964 Sinorhizobium medicae WSM419 hypothetical protein YP_001326652.1 1042293 D 366394 CDS YP_001326653.1 150396186 5321807 complement(1042863..1043807) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01330 putative transcription regulator protein; LysR family transcriptional regulator 1043807 5321807 Smed_0965 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326653.1 1042863 R 366394 CDS YP_001326654.1 150396187 5321808 1044014..1044634 1 NC_009636.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sme:SMc01329 probable acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 1044634 5321808 Smed_0966 Sinorhizobium medicae WSM419 NAD(P)H dehydrogenase (quinone) YP_001326654.1 1044014 D 366394 CDS YP_001326655.1 150396188 5321809 1044836..1045120 1 NC_009636.1 KEGG: sme:SMc01328 hypothetical protein; hypothetical protein 1045120 5321809 Smed_0967 Sinorhizobium medicae WSM419 hypothetical protein YP_001326655.1 1044836 D 366394 CDS YP_001326656.1 150396189 5321810 complement(1045110..1045985) 1 NC_009636.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sme:SMc01327 putative tRNA/rRNA methyltransferase protein; RNA methyltransferase 1045985 5321810 Smed_0968 Sinorhizobium medicae WSM419 RNA methyltransferase YP_001326656.1 1045110 R 366394 CDS YP_001326657.1 150396190 5321813 1046647..1047822 1 NC_009636.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1047822 5321813 Smed_0969 Sinorhizobium medicae WSM419 elongation factor Tu YP_001326657.1 1046647 D 366394 CDS YP_001326658.1 150396191 5321814 1048100..1048765 1 NC_009636.1 KEGG: sme:SMc01325 hypothetical/unknown protein; hypothetical protein 1048765 5321814 Smed_0970 Sinorhizobium medicae WSM419 hypothetical protein YP_001326658.1 1048100 D 366394 CDS YP_001326659.1 150396192 5321815 1048866..1049759 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc01324 putative oxidoreductase protein; NAD-dependent epimerase/dehydratase 1049759 5321815 Smed_0971 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001326659.1 1048866 D 366394 CDS YP_001326660.1 150396193 5321817 1050192..1050392 1 NC_009636.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1050392 secE 5321817 secE Sinorhizobium medicae WSM419 preprotein translocase subunit SecE YP_001326660.1 1050192 D 366394 CDS YP_001326661.1 150396194 5321818 1050409..1050939 1 NC_009636.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1050939 nusG 5321818 nusG Sinorhizobium medicae WSM419 transcription antitermination protein NusG YP_001326661.1 1050409 D 366394 CDS YP_001326662.1 150396195 5321819 1051156..1051584 1 NC_009636.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1051584 rplK 5321819 rplK Sinorhizobium medicae WSM419 50S ribosomal protein L11 YP_001326662.1 1051156 D 366394 CDS YP_001326663.1 150396196 5321820 1051589..1052287 1 NC_009636.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1052287 rplA 5321820 rplA Sinorhizobium medicae WSM419 50S ribosomal protein L1 YP_001326663.1 1051589 D 366394 CDS YP_001326664.1 150396197 5321821 1052552..1053139 1 NC_009636.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1053139 rplJ 5321821 rplJ Sinorhizobium medicae WSM419 50S ribosomal protein L10 YP_001326664.1 1052552 D 366394 CDS YP_001326665.1 150396198 5321822 1053198..1053575 1 NC_009636.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1053575 rplL 5321822 rplL Sinorhizobium medicae WSM419 50S ribosomal protein L7/L12 YP_001326665.1 1053198 D 366394 CDS YP_001326666.1 150396199 5321823 1053840..1057982 1 NC_009636.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1057982 rpoB 5321823 rpoB Sinorhizobium medicae WSM419 DNA-directed RNA polymerase subunit beta YP_001326666.1 1053840 D 366394 CDS YP_001326667.1 150396200 5321824 1058166..1062371 1 NC_009636.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1062371 5321824 Smed_0979 Sinorhizobium medicae WSM419 DNA-directed RNA polymerase subunit beta' YP_001326667.1 1058166 D 366394 CDS YP_001326668.1 150396201 5321825 complement(1062472..1062768) 1 NC_009636.1 KEGG: sme:SMc01315 hypothetical protein; hypothetical protein 1062768 5321825 Smed_0980 Sinorhizobium medicae WSM419 hypothetical protein YP_001326668.1 1062472 R 366394 CDS YP_001326669.1 150396202 5321826 1063468..1063839 1 NC_009636.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1063839 rpsL 5321826 rpsL Sinorhizobium medicae WSM419 30S ribosomal protein S12 YP_001326669.1 1063468 D 366394 CDS YP_001326670.1 150396203 5321827 1063897..1064367 1 NC_009636.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1064367 5321827 Smed_0982 Sinorhizobium medicae WSM419 30S ribosomal protein S7 YP_001326670.1 1063897 D 366394 CDS YP_001326671.1 150396204 5321828 1064397..1066496 1 NC_009636.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1066496 5321828 Smed_0983 Sinorhizobium medicae WSM419 elongation factor G YP_001326671.1 1064397 D 366394 CDS YP_001326672.1 150396205 5321829 1066568..1067743 1 NC_009636.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1067743 5321829 Smed_0984 Sinorhizobium medicae WSM419 elongation factor Tu YP_001326672.1 1066568 D 366394 CDS YP_001326673.1 150396206 5321830 1067885..1068193 1 NC_009636.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1068193 rpsJ 5321830 rpsJ Sinorhizobium medicae WSM419 30S ribosomal protein S10 YP_001326673.1 1067885 D 366394 CDS YP_001326674.1 150396207 5321831 1068316..1069002 1 NC_009636.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1069002 rplC 5321831 rplC Sinorhizobium medicae WSM419 50S ribosomal protein L3 YP_001326674.1 1068316 D 366394 CDS YP_001326675.1 150396208 5321832 1069015..1069635 1 NC_009636.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1069635 rplD 5321832 rplD Sinorhizobium medicae WSM419 50S ribosomal protein L4 YP_001326675.1 1069015 D 366394 CDS YP_001326676.1 150396209 5321833 1069632..1069925 1 NC_009636.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1069925 rplW 5321833 rplW Sinorhizobium medicae WSM419 50S ribosomal protein L23 YP_001326676.1 1069632 D 366394 CDS YP_001326677.1 150396210 5321834 1069970..1070806 1 NC_009636.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1070806 rplB 5321834 rplB Sinorhizobium medicae WSM419 50S ribosomal protein L2 YP_001326677.1 1069970 D 366394 CDS YP_001326678.1 150396211 5321835 1070822..1071100 1 NC_009636.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1071100 rpsS 5321835 rpsS Sinorhizobium medicae WSM419 30S ribosomal protein S19 YP_001326678.1 1070822 D 366394 CDS YP_001326679.1 150396212 5321836 1071103..1071492 1 NC_009636.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1071492 rplV 5321836 rplV Sinorhizobium medicae WSM419 50S ribosomal protein L22 YP_001326679.1 1071103 D 366394 CDS YP_001326680.1 150396213 5321837 1071492..1072205 1 NC_009636.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1072205 rpsC 5321837 rpsC Sinorhizobium medicae WSM419 30S ribosomal protein S3 YP_001326680.1 1071492 D 366394 CDS YP_001326681.1 150396214 5321838 1072244..1072657 1 NC_009636.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1072657 rplP 5321838 rplP Sinorhizobium medicae WSM419 50S ribosomal protein L16 YP_001326681.1 1072244 D 366394 CDS YP_001326682.1 150396215 5321839 1072670..1072870 1 NC_009636.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1072870 5321839 Smed_0994 Sinorhizobium medicae WSM419 50S ribosomal protein L29 YP_001326682.1 1072670 D 366394 CDS YP_001326683.1 150396216 5321840 1072884..1073120 1 NC_009636.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1073120 rpsQ 5321840 rpsQ Sinorhizobium medicae WSM419 30S ribosomal protein S17 YP_001326683.1 1072884 D 366394 CDS YP_001326684.1 150396217 5321841 1073299..1073667 1 NC_009636.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1073667 rplN 5321841 rplN Sinorhizobium medicae WSM419 50S ribosomal protein L14 YP_001326684.1 1073299 D 366394 CDS YP_001326685.1 150396218 5321842 1073682..1073993 1 NC_009636.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1073993 rplX 5321842 rplX Sinorhizobium medicae WSM419 50S ribosomal protein L24 YP_001326685.1 1073682 D 366394 CDS YP_001326686.1 150396219 5321843 1073986..1074543 1 NC_009636.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1074543 rplE 5321843 rplE Sinorhizobium medicae WSM419 50S ribosomal protein L5 YP_001326686.1 1073986 D 366394 CDS YP_001326687.1 150396220 5321844 1074578..1074883 1 NC_009636.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1074883 rpsN 5321844 rpsN Sinorhizobium medicae WSM419 30S ribosomal protein S14 YP_001326687.1 1074578 D 366394 CDS YP_001326688.1 150396221 5321845 1074896..1075294 1 NC_009636.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1075294 rpsH 5321845 rpsH Sinorhizobium medicae WSM419 30S ribosomal protein S8 YP_001326688.1 1074896 D 366394 CDS YP_001326689.1 150396222 5321846 1075335..1075868 1 NC_009636.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1075868 rplF 5321846 rplF Sinorhizobium medicae WSM419 50S ribosomal protein L6 YP_001326689.1 1075335 D 366394 CDS YP_001326690.1 150396223 5321847 1075881..1076243 1 NC_009636.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1076243 rplR 5321847 rplR Sinorhizobium medicae WSM419 50S ribosomal protein L18 YP_001326690.1 1075881 D 366394 CDS YP_001326691.1 150396224 5321848 1076377..1076946 1 NC_009636.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1076946 rpsE 5321848 rpsE Sinorhizobium medicae WSM419 30S ribosomal protein S5 YP_001326691.1 1076377 D 366394 CDS YP_001326692.1 150396225 5321849 1076959..1077162 1 NC_009636.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1077162 rpmD 5321849 rpmD Sinorhizobium medicae WSM419 50S ribosomal protein L30 YP_001326692.1 1076959 D 366394 CDS YP_001326693.1 150396226 5321850 1077176..1077646 1 NC_009636.1 late assembly protein; 50S ribosomal protein L15 1077646 rplO 5321850 rplO Sinorhizobium medicae WSM419 50S ribosomal protein L15 YP_001326693.1 1077176 D 366394 CDS YP_001326694.1 150396227 5321851 1077882..1079222 1 NC_009636.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1079222 secY 5321851 secY Sinorhizobium medicae WSM419 preprotein translocase subunit SecY YP_001326694.1 1077882 D 366394 CDS YP_001326695.1 150396228 5321852 1079219..1079797 1 NC_009636.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1079797 adk 5321852 adk Sinorhizobium medicae WSM419 adenylate kinase YP_001326695.1 1079219 D 366394 CDS YP_001326696.1 150396229 5321853 1080029..1080397 1 NC_009636.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1080397 rpsM 5321853 rpsM Sinorhizobium medicae WSM419 30S ribosomal protein S13 YP_001326696.1 1080029 D 366394 CDS YP_001326697.1 150396230 5321854 1080630..1081019 1 NC_009636.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1081019 5321854 Smed_1009 Sinorhizobium medicae WSM419 30S ribosomal protein S11 YP_001326697.1 1080630 D 366394 CDS YP_001326698.1 150396231 5321855 1081123..1082133 1 NC_009636.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1082133 5321855 Smed_1010 Sinorhizobium medicae WSM419 DNA-directed RNA polymerase subunit alpha YP_001326698.1 1081123 D 366394 CDS YP_001326699.1 150396232 5321856 1082180..1082605 1 NC_009636.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1082605 rplQ 5321856 rplQ Sinorhizobium medicae WSM419 50S ribosomal protein L17 YP_001326699.1 1082180 D 366394 CDS YP_001326700.1 150396233 5321857 complement(1082668..1083321) 1 NC_009636.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 1083321 5321857 Smed_1012 Sinorhizobium medicae WSM419 putative sulfite oxidase subunit YedZ YP_001326700.1 1082668 R 366394 CDS YP_001326701.1 150396234 5321858 complement(1083324..1084265) 1 NC_009636.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 1084265 5321858 Smed_1013 Sinorhizobium medicae WSM419 putative sulfite oxidase subunit YedY YP_001326701.1 1083324 R 366394 CDS YP_001326702.1 150396235 5321859 1084606..1086003 1 NC_009636.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sme:SMc01280 probable protease protein; protease Do 1086003 5321859 Smed_1014 Sinorhizobium medicae WSM419 protease Do YP_001326702.1 1084606 D 366394 CDS YP_001326703.1 150396236 5321860 1086000..1087310 1 NC_009636.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sme:SMc01279 putative ATPase; recombination factor protein RarA 1087310 5321860 Smed_1015 Sinorhizobium medicae WSM419 recombination factor protein RarA YP_001326703.1 1086000 D 366394 CDS YP_001326704.1 150396237 5321861 1087470..1087784 1 NC_009636.1 PFAM: small multidrug resistance protein; KEGG: sme:SMc01278 probable chaperone homologue transmembrane protein; small multidrug resistance protein 1087784 5321861 Smed_1016 Sinorhizobium medicae WSM419 small multidrug resistance protein YP_001326704.1 1087470 D 366394 CDS YP_001326705.1 150396238 5321862 complement(1087916..1088701) 1 NC_009636.1 PFAM: ATP12 ATPase; KEGG: sme:SMc01277 hypothetical protein; ATP12 ATPase 1088701 5321862 Smed_1017 Sinorhizobium medicae WSM419 ATP12 ATPase YP_001326705.1 1087916 R 366394 CDS YP_001326706.1 150396239 5321863 complement(1088694..1089359) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc01276 putative phosphoglycolate phosphatase protein; HAD family hydrolase 1089359 5321863 Smed_1018 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001326706.1 1088694 R 366394 CDS YP_001326707.1 150396240 5321864 complement(1089359..1090351) 1 NC_009636.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: sme:SMc01275 probable ribosomal large subunit pseudouridine synthase C protein; RluA family pseudouridine synthase 1090351 5321864 Smed_1019 Sinorhizobium medicae WSM419 RluA family pseudouridine synthase YP_001326707.1 1089359 R 366394 CDS YP_001326708.1 150396241 5321865 complement(1090390..1090776) 1 NC_009636.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1090776 5321865 Smed_1020 Sinorhizobium medicae WSM419 camphor resistance protein CrcB YP_001326708.1 1090390 R 366394 CDS YP_001326709.1 150396242 5321866 complement(1090778..1091611) 1 NC_009636.1 TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; KEGG: sme:SMc01273 putative S-formylglutathione hydrolase protein; S-formylglutathione hydrolase 1091611 5321866 Smed_1021 Sinorhizobium medicae WSM419 S-formylglutathione hydrolase YP_001326709.1 1090778 R 366394 CDS YP_001326710.1 150396243 5321867 complement(1091628..1092287) 1 NC_009636.1 PFAM: protein of unknown function DUF1345; KEGG: sme:SMc01272 hypothetical protein; hypothetical protein 1092287 5321867 Smed_1022 Sinorhizobium medicae WSM419 hypothetical protein YP_001326710.1 1091628 R 366394 CDS YP_001326711.1 150396244 5321868 complement(1092310..1092750) 1 NC_009636.1 PFAM: protein of unknown function DUF188; KEGG: sme:SMc01271 conserved hypothetical protein; hypothetical protein 1092750 5321868 Smed_1023 Sinorhizobium medicae WSM419 hypothetical protein YP_001326711.1 1092310 R 366394 CDS YP_001326712.1 150396245 5321869 complement(1092826..1093953) 1 NC_009636.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc01270 probable alcohol dehydrogenase class III + glutathione-dependent formaldehyde dehydrogenase protein; S-(hydroxymethyl)glutathione dehydrogenase 1093953 5321869 Smed_1024 Sinorhizobium medicae WSM419 S-(hydroxymethyl)glutathione dehydrogenase YP_001326712.1 1092826 R 366394 CDS YP_001326713.1 150396246 5321870 complement(1094038..1094430) 1 NC_009636.1 PFAM: helix-turn-helix domain protein; bacteriophage CI repressor; KEGG: sme:SMc01269 putative transcription regulator protein; helix-turn-helix domain-containing protein 1094430 5321870 Smed_1025 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001326713.1 1094038 R 366394 CDS YP_001326714.1 150396247 5321871 complement(1094639..1095427) 1 NC_009636.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1095427 lipB 5321871 lipB Sinorhizobium medicae WSM419 lipoate-protein ligase B YP_001326714.1 1094639 R 366394 CDS YP_001326715.1 150396248 5321873 1096247..1098196 1 NC_009636.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sme:SMc01267 serine protein kinase; putative serine protein kinase PrkA 1098196 5321873 Smed_1027 Sinorhizobium medicae WSM419 putative serine protein kinase PrkA YP_001326715.1 1096247 D 366394 CDS YP_001326716.1 150396249 5321874 1098221..1099537 1 NC_009636.1 PFAM: protein of unknown function DUF444; KEGG: sme:SMc01266 hypothetical protein; hypothetical protein 1099537 5321874 Smed_1028 Sinorhizobium medicae WSM419 hypothetical protein YP_001326716.1 1098221 D 366394 CDS YP_001326717.1 150396250 5321875 1099550..1101091 1 NC_009636.1 PFAM: SpoVR family protein; KEGG: sme:SMc01265 hypothetical protein; SpoVR family protein 1101091 5321875 Smed_1029 Sinorhizobium medicae WSM419 SpoVR family protein YP_001326717.1 1099550 D 366394 CDS YP_001326718.1 150396251 5321876 complement(1101296..1101649) 1 NC_009636.1 KEGG: sme:SMc01264 hypothetical protein; hypothetical protein 1101649 5321876 Smed_1030 Sinorhizobium medicae WSM419 hypothetical protein YP_001326718.1 1101296 R 366394 CDS YP_001326719.1 150396252 5321877 complement(1101709..1101975) 1 NC_009636.1 KEGG: sme:SMc01263 hypothetical protein; hypothetical protein 1101975 5321877 Smed_1031 Sinorhizobium medicae WSM419 hypothetical protein YP_001326719.1 1101709 R 366394 CDS YP_001326720.1 150396253 5321878 complement(1102150..1102641) 1 NC_009636.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1102641 5321878 Smed_1032 Sinorhizobium medicae WSM419 peptide deformylase YP_001326720.1 1102150 R 366394 CDS YP_001326721.1 150396254 5321879 1102861..1104282 1 NC_009636.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sme:SMc01261 putative transporter transmembrane protein; magnesium transporter 1104282 5321879 Smed_1033 Sinorhizobium medicae WSM419 magnesium transporter YP_001326721.1 1102861 D 366394 CDS YP_001326722.1 150396255 5321880 1104457..1104843 1 NC_009636.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sme:SMc01260 putative transcription regulator protein; MerR family transcriptional regulator 1104843 5321880 Smed_1034 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001326722.1 1104457 D 366394 CDS YP_001326723.1 150396256 5321881 complement(1104889..1105986) 1 NC_009636.1 PFAM: protein of unknown function DUF1624; KEGG: sme:SMc01258 hypothetical protein; hypothetical protein 1105986 5321881 Smed_1035 Sinorhizobium medicae WSM419 hypothetical protein YP_001326723.1 1104889 R 366394 CDS YP_001326724.1 150396257 5321882 complement(1106039..1106728) 1 NC_009636.1 PFAM: protein of unknown function DUF599; KEGG: sme:SMc01257 hypothetical protein; hypothetical protein 1106728 5321882 Smed_1036 Sinorhizobium medicae WSM419 hypothetical protein YP_001326724.1 1106039 R 366394 CDS YP_001326725.1 150396258 5321883 1107368..1108768 1 NC_009636.1 TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sme:SMc01256 probable L-serine dehydratase protein; L-serine dehydratase 1 1108768 5321883 Smed_1037 Sinorhizobium medicae WSM419 L-serine dehydratase 1 YP_001326725.1 1107368 D 366394 CDS YP_001326726.1 150396259 5321884 1108895..1109332 1 NC_009636.1 PFAM: uncharacterised conserved protein UCP032025; KEGG: sme:SMc00995 hypothetical protein; hypothetical protein 1109332 5321884 Smed_1038 Sinorhizobium medicae WSM419 hypothetical protein YP_001326726.1 1108895 D 366394 CDS YP_001326727.1 150396260 5321885 complement(1109391..1109660) 1 NC_009636.1 KEGG: sme:SMc01068 hypothetical/unknown protein; hypothetical protein 1109660 5321885 Smed_1039 Sinorhizobium medicae WSM419 hypothetical protein YP_001326727.1 1109391 R 366394 CDS YP_001326728.1 150396261 5321886 complement(1109818..1111302) 1 NC_009636.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: sme:SMc00996 putative penicillin-binding protein; serine-type D-Ala-D-Ala carboxypeptidase 1111302 5321886 Smed_1040 Sinorhizobium medicae WSM419 serine-type D-Ala-D-Ala carboxypeptidase YP_001326728.1 1109818 R 366394 CDS YP_001326729.1 150396262 5321887 complement(1111546..1112274) 1 NC_009636.1 KEGG: sme:SMc00997 hypothetical protein; hypothetical protein 1112274 5321887 Smed_1041 Sinorhizobium medicae WSM419 hypothetical protein YP_001326729.1 1111546 R 366394 CDS YP_001326730.1 150396263 5321888 complement(1112475..1113083) 1 NC_009636.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: sme:SMc00998 conserved hypothetical signal peptide protein; transglutaminase 1113083 5321888 Smed_1042 Sinorhizobium medicae WSM419 transglutaminase YP_001326730.1 1112475 R 366394 CDS YP_001326731.1 150396264 5321889 complement(1113578..1114186) 1 NC_009636.1 PFAM: type IV pilus assembly PilZ; KEGG: sme:SMc00999 hypothetical protein; type IV pilus assembly PilZ 1114186 5321889 Smed_1043 Sinorhizobium medicae WSM419 type IV pilus assembly PilZ YP_001326731.1 1113578 R 366394 CDS YP_001326732.1 150396265 5321890 complement(1114277..1114879) 1 NC_009636.1 PFAM: protein of unknown function DUF1457; KEGG: sme:SMc01000 hypothetical protein; hypothetical protein 1114879 5321890 Smed_1044 Sinorhizobium medicae WSM419 hypothetical protein YP_001326732.1 1114277 R 366394 CDS YP_001326733.1 150396266 5321891 1115326..1116057 1 NC_009636.1 PFAM: Rhomboid family protein; KEGG: sme:SMc01001 hypothetical protein; rhomboid family protein 1116057 5321891 Smed_1045 Sinorhizobium medicae WSM419 rhomboid family protein YP_001326733.1 1115326 D 366394 CDS YP_001326734.1 150396267 5321892 1116345..1116773 1 NC_009636.1 PFAM: CBS domain containing protein; KEGG: sme:SMc01002 hypothetical protein; signal-transduction protein 1116773 5321892 Smed_1046 Sinorhizobium medicae WSM419 signal-transduction protein YP_001326734.1 1116345 D 366394 CDS YP_001326735.1 150396268 5321893 complement(1116820..1117785) 1 NC_009636.1 PFAM: Patatin; KEGG: sme:SMc01003 hypothetical protein; patatin 1117785 5321893 Smed_1047 Sinorhizobium medicae WSM419 patatin YP_001326735.1 1116820 R 366394 CDS YP_001326736.1 150396269 5321894 complement(1118131..1118586) 1 NC_009636.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1118586 hisI 5321894 hisI Sinorhizobium medicae WSM419 phosphoribosyl-AMP cyclohydrolase YP_001326736.1 1118131 R 366394 CDS YP_001326737.1 150396270 5321895 complement(1118694..1119311) 1 NC_009636.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1119311 folE 5321895 folE Sinorhizobium medicae WSM419 GTP cyclohydrolase I YP_001326737.1 1118694 R 366394 CDS YP_001326738.1 150396271 5321896 1119649..1120095 1 NC_009636.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: sme:SMc01006 hypothetical protein; NifU domain-containing protein 1120095 5321896 Smed_1050 Sinorhizobium medicae WSM419 NifU domain-containing protein YP_001326738.1 1119649 D 366394 CDS YP_001326739.1 150396272 5321897 1120138..1120467 1 NC_009636.1 PFAM: protein of unknown function DUF37; KEGG: sme:SMc01007 hypothetical protein; hypothetical protein 1120467 5321897 Smed_1051 Sinorhizobium medicae WSM419 hypothetical protein YP_001326739.1 1120138 D 366394 CDS YP_001326740.1 150396273 5321898 1120484..1120891 1 NC_009636.1 KEGG: sme:SMc01008 hypothetical protein; hypothetical protein 1120891 5321898 Smed_1052 Sinorhizobium medicae WSM419 hypothetical protein YP_001326740.1 1120484 D 366394 CDS YP_001326741.1 150396274 5321899 1120897..1121436 1 NC_009636.1 PFAM: protein of unknown function DUF1697; KEGG: sme:SMc01009 hypothetical protein; hypothetical protein 1121436 5321899 Smed_1053 Sinorhizobium medicae WSM419 hypothetical protein YP_001326741.1 1120897 D 366394 CDS YP_001326742.1 150396275 5321900 1121556..1123538 1 NC_009636.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1123538 thrS 5321900 thrS Sinorhizobium medicae WSM419 threonyl-tRNA synthetase YP_001326742.1 1121556 D 366394 CDS YP_001326743.1 150396276 5321901 complement(1123658..1124707) 1 NC_009636.1 KEGG: sme:SMc01011 hypothetical protein; hypothetical protein 1124707 5321901 Smed_1055 Sinorhizobium medicae WSM419 hypothetical protein YP_001326743.1 1123658 R 366394 CDS YP_001326744.1 150396277 5321902 1124754..1125341 1 NC_009636.1 PFAM: nitroreductase; KEGG: sme:SMc01012 hypothetical protein; nitroreductase 1125341 5321902 Smed_1056 Sinorhizobium medicae WSM419 nitroreductase YP_001326744.1 1124754 D 366394 CDS YP_001326745.1 150396278 5321903 1125341..1125943 1 NC_009636.1 KEGG: sme:SMc01013 hypothetical protein; hypothetical protein 1125943 5321903 Smed_1057 Sinorhizobium medicae WSM419 hypothetical protein YP_001326745.1 1125341 D 366394 CDS YP_001326746.1 150396279 5321904 complement(1125946..1126632) 1 NC_009636.1 PFAM: HpcH/HpaI aldolase; KEGG: sme:SMc01014 hypothetical protein; HpcH/HpaI aldolase 1126632 5321904 Smed_1058 Sinorhizobium medicae WSM419 HpcH/HpaI aldolase YP_001326746.1 1125946 R 366394 CDS YP_001326747.1 150396280 5321905 1126705..1127838 1 NC_009636.1 KEGG: sme:SMc01015 hypothetical protein; hypothetical protein 1127838 5321905 Smed_1059 Sinorhizobium medicae WSM419 hypothetical protein YP_001326747.1 1126705 D 366394 CDS YP_001326748.1 150396281 5321906 complement(1127853..1128281) 1 NC_009636.1 KEGG: sme:SMc01016 hypothetical protein; hypothetical protein 1128281 5321906 Smed_1060 Sinorhizobium medicae WSM419 hypothetical protein YP_001326748.1 1127853 R 366394 CDS YP_001326749.1 150396282 5321907 1128489..1128965 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01017 putative acetyltransferase protein; N-acetyltransferase GCN5 1128965 5321907 Smed_1061 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326749.1 1128489 D 366394 CDS YP_001326750.1 150396283 5321908 complement(1129087..1131147) 1 NC_009636.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1131147 5321908 Smed_1062 Sinorhizobium medicae WSM419 DNA topoisomerase IV subunit B YP_001326750.1 1129087 R 366394 CDS YP_001326751.1 150396284 5321909 1131391..1132275 1 NC_009636.1 KEGG: sme:SMc01019 hypothetical protein; hypothetical protein 1132275 5321909 Smed_1063 Sinorhizobium medicae WSM419 hypothetical protein YP_001326751.1 1131391 D 366394 CDS YP_001326752.1 150396285 5321910 1132307..1133632 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc01020 hypothetical protein; FAD linked oxidase domain-containing protein 1133632 5321910 Smed_1064 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001326752.1 1132307 D 366394 CDS YP_001326753.1 150396286 5321911 complement(1133667..1134272) 1 NC_009636.1 PFAM: YceI family protein; KEGG: sme:SMc01021 hypothetical protein; hypothetical protein 1134272 5321911 Smed_1065 Sinorhizobium medicae WSM419 hypothetical protein YP_001326753.1 1133667 R 366394 CDS YP_001326754.1 150396287 5321912 complement(1134269..1134895) 1 NC_009636.1 PFAM: cytochrome B561; KEGG: sme:SMc01022 putative cytochrome b transmembrane protein; cytochrome B561 1134895 5321912 Smed_1066 Sinorhizobium medicae WSM419 cytochrome B561 YP_001326754.1 1134269 R 366394 CDS YP_001326755.1 150396288 5321913 1135120..1135890 1 NC_009636.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1135890 tpiA 5321913 tpiA Sinorhizobium medicae WSM419 triosephosphate isomerase YP_001326755.1 1135120 D 366394 CDS YP_001326756.1 150396289 5321914 1136013..1136483 1 NC_009636.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: sme:SMc01024 preprotein translocase SecG subunit; preprotein translocase subunit SecG 1136483 secG 5321914 secG Sinorhizobium medicae WSM419 preprotein translocase subunit SecG YP_001326756.1 1136013 D 366394 CDS YP_001326757.1 150396290 5321915 1136627..1138255 1 NC_009636.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1138255 pyrG 5321915 pyrG Sinorhizobium medicae WSM419 CTP synthetase YP_001326757.1 1136627 D 366394 CDS YP_001326758.1 150396291 5321916 1138390..1139280 1 NC_009636.1 KEGG: sme:SMc01026 hypothetical/unknown protein; hypothetical protein 1139280 5321916 Smed_1070 Sinorhizobium medicae WSM419 hypothetical protein YP_001326758.1 1138390 D 366394 CDS YP_001326759.1 150396292 5321917 1139283..1140122 1 NC_009636.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1140122 5321917 Smed_1071 Sinorhizobium medicae WSM419 2-dehydro-3-deoxyphosphooctonate aldolase YP_001326759.1 1139283 D 366394 CDS YP_001326760.1 150396293 5321918 1140235..1141509 1 NC_009636.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1141509 eno 5321918 eno Sinorhizobium medicae WSM419 phosphopyruvate hydratase YP_001326760.1 1140235 D 366394 CDS YP_001326761.1 150396294 5321920 1142718..1143572 1 NC_009636.1 KEGG: pfa:PF13_0056 hypothetical protein; hypothetical protein 1143572 5321920 Smed_1074 Sinorhizobium medicae WSM419 hypothetical protein YP_001326761.1 1142718 D 366394 CDS YP_001326762.1 150396295 5321921 1144025..1144345 1 NC_009636.1 PFAM: Septum formation initiator; KEGG: sme:SMc01029 hypothetical protein; septum formation initiator 1144345 5321921 Smed_1075 Sinorhizobium medicae WSM419 septum formation initiator YP_001326762.1 1144025 D 366394 CDS YP_001326763.1 150396296 5321922 1144482..1145528 1 NC_009636.1 PFAM: dehydrogenase E1 component; KEGG: sme:SMc01030 pyruvate dehydrogenase alpha2 subunit protein; dehydrogenase E1 component 1145528 5321922 Smed_1076 Sinorhizobium medicae WSM419 dehydrogenase E1 component YP_001326763.1 1144482 D 366394 CDS YP_001326764.1 150396297 5321923 1145546..1146943 1 NC_009636.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1146943 5321923 Smed_1077 Sinorhizobium medicae WSM419 pyruvate dehydrogenase subunit beta YP_001326764.1 1145546 D 366394 CDS YP_001326765.1 150396298 5321924 1146958..1148331 1 NC_009636.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sme:SMc01032 dihydrolipoamide S-acetyltransferase protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1148331 5321924 Smed_1078 Sinorhizobium medicae WSM419 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001326765.1 1146958 D 366394 CDS YP_001326766.1 150396299 5321925 1148390..1149031 1 NC_009636.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sme:SMc01033 probable arylesterase protein; GDSL family lipase 1149031 5321925 Smed_1079 Sinorhizobium medicae WSM419 GDSL family lipase YP_001326766.1 1148390 D 366394 CDS YP_001326767.1 150396300 5321926 1149034..1149615 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01034 hypothetical protein; N-acetyltransferase GCN5 1149615 5321926 Smed_1080 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326767.1 1149034 D 366394 CDS YP_001326768.1 150396301 5321927 1149634..1151079 1 NC_009636.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1151079 5321927 Smed_1081 Sinorhizobium medicae WSM419 dihydrolipoamide dehydrogenase YP_001326768.1 1149634 D 366394 CDS YP_001326769.1 150396302 5321928 1151158..1151409 1 NC_009636.1 PFAM: Transglycosylase-associated protein; KEGG: sme:SMc01036 hypothetical protein; transglycosylase-associated protein 1151409 5321928 Smed_1082 Sinorhizobium medicae WSM419 transglycosylase-associated protein YP_001326769.1 1151158 D 366394 CDS YP_001326770.1 150396303 5321929 1151591..1152562 1 NC_009636.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1152562 5321929 Smed_1083 Sinorhizobium medicae WSM419 lipoyl synthase YP_001326770.1 1151591 D 366394 CDS YP_001326771.1 150396304 5321931 1153262..1153711 1 NC_009636.1 PFAM: cyclase/dehydrase; KEGG: sme:SMc01038 hypothetical protein; cyclase/dehydrase 1153711 5321931 Smed_1085 Sinorhizobium medicae WSM419 cyclase/dehydrase YP_001326771.1 1153262 D 366394 CDS YP_001326772.1 150396305 5321932 complement(1153699..1154196) 1 NC_009636.1 PFAM: CinA domain protein; KEGG: sme:SMc01039 putative competence-damage protein; CinA domain-containing protein 1154196 5321932 Smed_1086 Sinorhizobium medicae WSM419 CinA domain-containing protein YP_001326772.1 1153699 R 366394 CDS YP_001326773.1 150396306 5321933 complement(1154196..1155410) 1 NC_009636.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1155410 ispDF 5321933 ispDF Sinorhizobium medicae WSM419 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001326773.1 1154196 R 366394 CDS YP_001326774.1 150396307 5321934 1155641..1156654 1 NC_009636.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: sme:SMc01041 putative NifR3-like protein; nifR3 family TIM-barrel protein 1156654 5321934 Smed_1088 Sinorhizobium medicae WSM419 nifR3 family TIM-barrel protein YP_001326774.1 1155641 D 366394 CDS YP_001326775.1 150396308 5321935 1156651..1157793 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: sme:SMc01042 nitrogen regulation protein; nitrogen-specific signal transduction histidine kinase NtrB 1157793 5321935 Smed_1089 Sinorhizobium medicae WSM419 nitrogen-specific signal transduction histidine kinase NtrB YP_001326775.1 1156651 D 366394 CDS YP_001326776.1 150396309 5321936 1157790..1159244 1 NC_009636.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMc01043 nitrogen assimilation regulatory protein; Fis family nitrogen metabolism transcriptional regulator NtrC 1159244 5321936 Smed_1090 Sinorhizobium medicae WSM419 Fis family nitrogen metabolism transcriptional regulator NtrC YP_001326776.1 1157790 D 366394 CDS YP_001326777.1 150396310 5321937 1159461..1161734 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc01044 probable nitrogen regulation transmembrane protein; multi-sensor signal transduction histidine kinase 1161734 5321937 Smed_1091 Sinorhizobium medicae WSM419 multi-sensor signal transduction histidine kinase YP_001326777.1 1159461 D 366394 CDS YP_001326778.1 150396311 5321938 1161724..1163088 1 NC_009636.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sme:SMc01045 probable nitrogen regulation protein; two component sigma54 specific Fis family transcriptional regulator 1163088 5321938 Smed_1092 Sinorhizobium medicae WSM419 two component sigma54 specific Fis family transcriptional regulator YP_001326778.1 1161724 D 366394 CDS YP_001326779.1 150396312 5321939 1163153..1164529 1 NC_009636.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 1164529 trkA 5321939 trkA Sinorhizobium medicae WSM419 potassium transporter peripheral membrane protein YP_001326779.1 1163153 D 366394 CDS YP_001326780.1 150396313 5321940 1164541..1165404 1 NC_009636.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 1165404 5321940 Smed_1094 Sinorhizobium medicae WSM419 D-amino acid aminotransferase YP_001326780.1 1164541 D 366394 CDS YP_001326781.1 150396314 5321941 1165507..1165749 1 NC_009636.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1165749 hfq 5321941 hfq Sinorhizobium medicae WSM419 RNA-binding protein Hfq YP_001326781.1 1165507 D 366394 CDS YP_001326782.1 150396315 5321942 1165756..1167153 1 NC_009636.1 PFAM: GTP-binding protein HSR1-related; KEGG: sme:SMc01049 putative GTP-binding protein; HSR1-like GTP-binding protein 1167153 5321942 Smed_1096 Sinorhizobium medicae WSM419 HSR1-like GTP-binding protein YP_001326782.1 1165756 D 366394 CDS YP_001326783.1 150396316 5321943 complement(1167251..1168087) 1 NC_009636.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 1168087 mazG 5321943 mazG Sinorhizobium medicae WSM419 nucleoside triphosphate pyrophosphohydrolase YP_001326783.1 1167251 R 366394 CDS YP_001326784.1 150396317 5321944 complement(1168091..1168678) 1 NC_009636.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sme:SMc01052 hypothetical protein; zinc-binding CMP/dCMP deaminase 1168678 5321944 Smed_1098 Sinorhizobium medicae WSM419 zinc-binding CMP/dCMP deaminase YP_001326784.1 1168091 R 366394 CDS YP_001326785.1 150396318 5321945 1168901..1170355 1 NC_009636.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMc01053 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ferrochelatase; uroporphyrin-III C-methyltransferase 1170355 5321945 Smed_1099 Sinorhizobium medicae WSM419 uroporphyrin-III C-methyltransferase YP_001326785.1 1168901 D 366394 CDS YP_001326786.1 150396319 5321946 1170366..1170683 1 NC_009636.1 KEGG: sme:SMc01054 hypothetical protein; hypothetical protein 1170683 5321946 Smed_1100 Sinorhizobium medicae WSM419 hypothetical protein YP_001326786.1 1170366 D 366394 CDS YP_001326787.1 150396320 5321947 1170698..1172371 1 NC_009636.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: sme:SMc02124 putative sulfite reductase; nitrite/sulfite reductase hemoprotein subunit beta 1172371 5321947 Smed_1101 Sinorhizobium medicae WSM419 nitrite/sulfite reductase hemoprotein subunit beta YP_001326787.1 1170698 D 366394 CDS YP_001326788.1 150396321 5321948 1172389..1172889 1 NC_009636.1 PFAM: uncharacterised conserved protein UCP030820; KEGG: sme:SMc02123 hypothetical protein; hypothetical protein 1172889 5321948 Smed_1102 Sinorhizobium medicae WSM419 hypothetical protein YP_001326788.1 1172389 D 366394 CDS YP_001326789.1 150396322 5321949 1173034..1173846 1 NC_009636.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMc02122 probable ferredoxin--NADP reductase protein; oxidoreductase FAD-binding subunit 1173846 5321949 Smed_1103 Sinorhizobium medicae WSM419 oxidoreductase FAD-binding subunit YP_001326789.1 1173034 D 366394 CDS YP_001326790.1 150396323 5321950 complement(join(1173892..1174494,1174494..1174838)) 1 NC_009636.1 KEGG: sme:SMb20783 putative transposase of insertion sequence ISRm2011-2, orfA protein; transposase 1174838 5321950 Smed_1104 Sinorhizobium medicae WSM419 transposase YP_001326790.1 1173892 R 366394 CDS YP_001326791.1 150396324 5321951 complement(1175043..1175819) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02121 probable general L-amino acid transport ATP-binding ABC transporter protein; ABC transporter-like protein 1175819 5321951 Smed_1105 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326791.1 1175043 R 366394 CDS YP_001326792.1 150396325 5321952 complement(1175836..1176990) 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02120 probable general L-amino acid transport permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 1176990 5321952 Smed_1106 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001326792.1 1175836 R 366394 CDS YP_001326793.1 150396326 5321953 complement(1176995..1178188) 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02119 probable general L-amino acid transport permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 1178188 5321953 Smed_1107 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001326793.1 1176995 R 366394 CDS YP_001326794.1 150396327 5321954 complement(1178288..1179313) 1 NC_009636.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; SMART: extracellular solute-binding protein family 3; KEGG: sme:SMc02118 probable general L-amino acid-binding periplasmic ABC transporter protein; cationic amino acid ABC transporter periplasmic binding protein 1179313 5321954 Smed_1108 Sinorhizobium medicae WSM419 cationic amino acid ABC transporter periplasmic binding protein YP_001326794.1 1178288 R 366394 CDS YP_001326795.1 150396328 5321955 1179427..1180836 1 NC_009636.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1180836 5321955 Smed_1109 Sinorhizobium medicae WSM419 cystathionine beta-lyase YP_001326795.1 1179427 D 366394 CDS YP_001326796.1 150396329 5321956 complement(1180879..1182048) 1 NC_009636.1 PFAM: monooxygenase FAD-binding; KEGG: sme:SMc02116 putative salicylate hydroxylase protein; FAD-binding monooxygenase 1182048 5321956 Smed_1110 Sinorhizobium medicae WSM419 FAD-binding monooxygenase YP_001326796.1 1180879 R 366394 CDS YP_001326797.1 150396330 5321957 complement(1182076..1182321) 1 NC_009636.1 KEGG: sme:SMc02115 hypothetical unknown protein; hypothetical protein 1182321 5321957 Smed_1111 Sinorhizobium medicae WSM419 hypothetical protein YP_001326797.1 1182076 R 366394 CDS YP_001326798.1 150396331 5321958 1182501..1183286 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc02114 hypothetical protein; alpha/beta hydrolase fold protein 1183286 5321958 Smed_1112 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001326798.1 1182501 D 366394 CDS YP_001326799.1 150396332 5321959 1183473..1184300 1 NC_009636.1 TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; KEGG: sme:SMc02113 probable serine acetyltransferase protein; serine O-acetyltransferase 1184300 5321959 Smed_1113 Sinorhizobium medicae WSM419 serine O-acetyltransferase YP_001326799.1 1183473 D 366394 CDS YP_001326800.1 150396333 5321960 1184454..1184657 1 NC_009636.1 KEGG: sme:SMc02112 hypothetical unknown protein; hypothetical protein 1184657 5321960 Smed_1114 Sinorhizobium medicae WSM419 hypothetical protein YP_001326800.1 1184454 D 366394 CDS YP_001326801.1 150396334 5321961 1184905..1185258 1 NC_009636.1 TIGRFAM: phasin family protein; KEGG: sme:SMc02111 hypothetical protein; phasin family protein 1185258 5321961 Smed_1115 Sinorhizobium medicae WSM419 phasin family protein YP_001326801.1 1184905 D 366394 CDS YP_001326802.1 150396335 5321962 1185528..1185881 1 NC_009636.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1185881 clpS 5321962 clpS Sinorhizobium medicae WSM419 ATP-dependent Clp protease adaptor protein ClpS YP_001326802.1 1185528 D 366394 CDS YP_001326803.1 150396336 5321963 1185891..1188407 1 NC_009636.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sme:SMc02109 probable ATP-dependent CLP protease ATP-binding subunit protein; ATP-dependent Clp protease ATP-binding protein ClpA 1188407 5321963 Smed_1117 Sinorhizobium medicae WSM419 ATP-dependent Clp protease ATP-binding protein ClpA YP_001326803.1 1185891 D 366394 CDS YP_001326804.1 150396337 5321964 1188482..1189228 1 NC_009636.1 PFAM: AzlC family protein; KEGG: sme:SMc02108 hypothetical protein; AzlC family protein 1189228 5321964 Smed_1118 Sinorhizobium medicae WSM419 AzlC family protein YP_001326804.1 1188482 D 366394 CDS YP_001326805.1 150396338 5321965 1189234..1189569 1 NC_009636.1 KEGG: sme:SMc02107 hypothetical unknown transmembrane protein; hypothetical protein 1189569 5321965 Smed_1119 Sinorhizobium medicae WSM419 hypothetical protein YP_001326805.1 1189234 D 366394 CDS YP_001326806.1 150396339 5321966 complement(1189637..1190056) 1 NC_009636.1 PFAM: histidine triad (HIT) protein; KEGG: sme:SMc02106 probable Hit-like protein; histidine triad (HIT) protein 1190056 5321966 Smed_1120 Sinorhizobium medicae WSM419 histidine triad (HIT) protein YP_001326806.1 1189637 R 366394 CDS YP_001326807.1 150396340 5321967 complement(1190101..1191288) 1 NC_009636.1 PFAM: protein of unknown function DUF482; KEGG: sme:SMc02105 hypothetical protein; hypothetical protein 1191288 5321967 Smed_1121 Sinorhizobium medicae WSM419 hypothetical protein YP_001326807.1 1190101 R 366394 CDS YP_001326808.1 150396341 5321968 complement(1191293..1192018) 1 NC_009636.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sme:SMc02104 conserved hypothetical protein; glycerophosphoryl diester phosphodiesterase 1192018 5321968 Smed_1122 Sinorhizobium medicae WSM419 glycerophosphoryl diester phosphodiesterase YP_001326808.1 1191293 R 366394 CDS YP_001326809.1 150396342 5321969 complement(1192032..1192499) 1 NC_009636.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc02103 hypothetical protein; endoribonuclease L-PSP 1192499 5321969 Smed_1123 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001326809.1 1192032 R 366394 CDS YP_001326810.1 150396343 5321970 1192640..1193458 1 NC_009636.1 PFAM: Domain of unknown function DUF1849; KEGG: sme:SMc02102 hypothetical protein; hypothetical protein 1193458 5321970 Smed_1124 Sinorhizobium medicae WSM419 hypothetical protein YP_001326810.1 1192640 D 366394 CDS YP_001326811.1 150396344 5321971 complement(1193619..1193831) 1 NC_009636.1 hypothetical protein 1193831 5321971 Smed_1125 Sinorhizobium medicae WSM419 hypothetical protein YP_001326811.1 1193619 R 366394 CDS YP_001326812.1 150396345 5321972 1194060..1195175 1 NC_009636.1 PFAM: ROK family protein; KEGG: bmb:BruAb2_1125 ROK family protein; ROK family protein 1195175 5321972 Smed_1126 Sinorhizobium medicae WSM419 ROK family protein YP_001326812.1 1194060 D 366394 CDS YP_001326813.1 150396346 5321973 1195172..1195975 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_1124 taurine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1195975 5321973 Smed_1127 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001326813.1 1195172 D 366394 CDS YP_001326814.1 150396347 5321974 1195972..1196775 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA1187 taurine ABC transporter, ATP-binding protein; ABC transporter-like protein 1196775 5321974 Smed_1128 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326814.1 1195972 D 366394 CDS YP_001326815.1 150396348 5321975 1196783..1197784 1 NC_009636.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bmb:BruAb2_1122 taurine ABC transporter, taurine-binding protein; aliphatic sulfonates ABC transporter substrate-binding protein 1197784 5321975 Smed_1129 Sinorhizobium medicae WSM419 aliphatic sulfonates ABC transporter substrate-binding protein YP_001326815.1 1196783 D 366394 CDS YP_001326816.1 150396349 5321976 1197841..1199454 1 NC_009636.1 PFAM: sulfatase; KEGG: aor:AO090012000003 beta-glucosidase-related glycosidases Pfam: Sulfatase Glyco_hydro_3 Glyco_hydro_3_C FG-GAP; sulfatase 1199454 5321976 Smed_1130 Sinorhizobium medicae WSM419 sulfatase YP_001326816.1 1197841 D 366394 CDS YP_001326817.1 150396350 5321977 1199650..1200417 1 NC_009636.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1200417 rpsB 5321977 rpsB Sinorhizobium medicae WSM419 30S ribosomal protein S2 YP_001326817.1 1199650 D 366394 CDS YP_001326818.1 150396351 5321978 1200665..1201588 1 NC_009636.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1201588 tsf 5321978 tsf Sinorhizobium medicae WSM419 elongation factor Ts YP_001326818.1 1200665 D 366394 CDS YP_001326819.1 150396352 5321979 1201772..1202494 1 NC_009636.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1202494 pyrH 5321979 pyrH Sinorhizobium medicae WSM419 uridylate kinase YP_001326819.1 1201772 D 366394 CDS YP_001326820.1 150396353 5321980 1202546..1203106 1 NC_009636.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1203106 frr 5321980 frr Sinorhizobium medicae WSM419 ribosome recycling factor YP_001326820.1 1202546 D 366394 CDS YP_001326821.1 150396354 5321981 1203128..1203886 1 NC_009636.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1203886 5321981 Smed_1135 Sinorhizobium medicae WSM419 undecaprenyl pyrophosphate synthase YP_001326821.1 1203128 D 366394 CDS YP_001326822.1 150396355 5321982 1203886..1204719 1 NC_009636.1 PFAM: phosphatidate cytidylyltransferase; KEGG: sme:SMc02096 probable phosphatidate cytidylyltransferase transmembrane protein; phosphatidate cytidylyltransferase 1204719 5321982 Smed_1136 Sinorhizobium medicae WSM419 phosphatidate cytidylyltransferase YP_001326822.1 1203886 D 366394 CDS YP_001326823.1 150396356 5321983 1204850..1205974 1 NC_009636.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: sme:SMc02095 hypothetical transmembrane protein; putative membrane-associated zinc metalloprotease 1205974 5321983 Smed_1137 Sinorhizobium medicae WSM419 putative membrane-associated zinc metalloprotease YP_001326823.1 1204850 D 366394 CDS YP_001326824.1 150396357 5321984 1206223..1208556 1 NC_009636.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sme:SMc02094 putative outer membrane transmembrane protein; surface antigen (D15) 1208556 5321984 Smed_1138 Sinorhizobium medicae WSM419 surface antigen (D15) YP_001326824.1 1206223 D 366394 CDS YP_001326825.1 150396358 5321985 1208600..1209664 1 NC_009636.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1209664 lpxD 5321985 lpxD Sinorhizobium medicae WSM419 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001326825.1 1208600 D 366394 CDS YP_001326826.1 150396359 5321986 1209657..1210121 1 NC_009636.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1210121 fabZ 5321986 fabZ Sinorhizobium medicae WSM419 (3R)-hydroxymyristoyl-ACP dehydratase YP_001326826.1 1209657 D 366394 CDS YP_001326827.1 150396360 5321987 1210124..1210936 1 NC_009636.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1210936 5321987 Smed_1141 Sinorhizobium medicae WSM419 UDP-N-acetylglucosamine acyltransferase YP_001326827.1 1210124 D 366394 CDS YP_001326828.1 150396361 5321988 1210936..1211823 1 NC_009636.1 PFAM: protein of unknown function DUF1009; KEGG: sme:SMc02090 hypothetical protein; hypothetical protein 1211823 5321988 Smed_1142 Sinorhizobium medicae WSM419 hypothetical protein YP_001326828.1 1210936 D 366394 CDS YP_001326829.1 150396362 5321989 1211820..1213019 1 NC_009636.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1213019 lpxB 5321989 lpxB Sinorhizobium medicae WSM419 lipid-A-disaccharide synthase YP_001326829.1 1211820 D 366394 CDS YP_001326830.1 150396363 5321990 complement(1213206..1214495) 1 NC_009636.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1214495 gltA 5321990 gltA Sinorhizobium medicae WSM419 type II citrate synthase YP_001326830.1 1213206 R 366394 CDS YP_001326831.1 150396364 5321991 1214802..1217201 1 NC_009636.1 PFAM: ComEC/Rec2-related protein; KEGG: sme:SMc02086 hypothetical protein; ComEC/Rec2-like protein 1217201 5321991 Smed_1145 Sinorhizobium medicae WSM419 ComEC/Rec2-like protein YP_001326831.1 1214802 D 366394 CDS YP_001326832.1 150396365 5321992 1217427..1218404 1 NC_009636.1 TIGRFAM: TonB-system energizer ExbB type-1; PFAM: MotA/TolQ/ExbB proton channel; KEGG: sme:SMc02085 probable biopolymer transport transmembrane protein; TonB-system energizer ExbB type-1 1218404 5321992 Smed_1146 Sinorhizobium medicae WSM419 TonB-system energizer ExbB type-1 YP_001326832.1 1217427 D 366394 CDS YP_001326833.1 150396366 5321993 1218412..1218837 1 NC_009636.1 TIGRFAM: TonB system transport protein ExbD type-1; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sme:SMc02084 probable biopolymer transport transmembrane protein; TonB system transport protein ExbD type-1 1218837 5321993 Smed_1147 Sinorhizobium medicae WSM419 TonB system transport protein ExbD type-1 YP_001326833.1 1218412 D 366394 CDS YP_001326834.1 150396367 5321994 1219126..1219785 1 NC_009636.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc02083 putative methyltransferase (PCM-like) transmembrane protein; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1219785 5321994 Smed_1148 Sinorhizobium medicae WSM419 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001326834.1 1219126 D 366394 CDS YP_001326835.1 150396368 5321995 1220069..1221439 1 NC_009636.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: sme:SMc02082 putative outer membrane secretion protein; TolC family type I secretion outer membrane protein 1221439 5321995 Smed_1149 Sinorhizobium medicae WSM419 TolC family type I secretion outer membrane protein YP_001326835.1 1220069 D 366394 CDS YP_001326836.1 150396369 5321996 1221690..1222472 1 NC_009636.1 KEGG: sme:SMc02081 hypothetical protein; hypothetical protein 1222472 5321996 Smed_1150 Sinorhizobium medicae WSM419 hypothetical protein YP_001326836.1 1221690 D 366394 CDS YP_001326837.1 150396370 5321997 1222779..1225622 1 NC_009636.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1225622 valS 5321997 valS Sinorhizobium medicae WSM419 valyl-tRNA synthetase YP_001326837.1 1222779 D 366394 CDS YP_001326838.1 150396371 5321998 1226053..1227300 1 NC_009636.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sme:SMc02079 putative outer membrane protein; aromatic hydrocarbon degradation membrane protein 1227300 5321998 Smed_1152 Sinorhizobium medicae WSM419 aromatic hydrocarbon degradation membrane protein YP_001326838.1 1226053 D 366394 CDS YP_001326839.1 150396372 5321999 1227758..1228561 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sme:SMc02078 exopolysaccharide biosynthesis regulatory protein; Sel1 domain-containing protein 1228561 5321999 Smed_1153 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001326839.1 1227758 D 366394 CDS YP_001326840.1 150396373 5322000 complement(1228596..1229387) 1 NC_009636.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMc02077 putative exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 1229387 5322000 Smed_1154 Sinorhizobium medicae WSM419 exodeoxyribonuclease III Xth YP_001326840.1 1228596 R 366394 CDS YP_001326841.1 150396374 5322001 1229573..1231036 1 NC_009636.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: sme:SMc02076 putative cardiolipin synthetase transmembrane protein; phospholipase D/transphosphatidylase 1231036 5322001 Smed_1155 Sinorhizobium medicae WSM419 phospholipase D/transphosphatidylase YP_001326841.1 1229573 D 366394 CDS YP_001326842.1 150396375 5322002 complement(1231052..1231381) 1 NC_009636.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: sme:SMc02075 hypothetical protein; iron-sulfur cluster assembly accessory protein 1231381 5322002 Smed_1156 Sinorhizobium medicae WSM419 iron-sulfur cluster assembly accessory protein YP_001326842.1 1231052 R 366394 CDS YP_001326843.1 150396376 5322003 1231597..1232814 1 NC_009636.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1232814 5322003 Smed_1157 Sinorhizobium medicae WSM419 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001326843.1 1231597 D 366394 CDS YP_001326844.1 150396377 5322004 1232913..1234670 1 NC_009636.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1234670 argS 5322004 argS Sinorhizobium medicae WSM419 arginyl-tRNA synthetase YP_001326844.1 1232913 D 366394 CDS YP_001326845.1 150396378 5322005 1234734..1237634 1 NC_009636.1 PFAM: Sporulation domain protein; KEGG: sme:SMc02072 hypothetical protein; sporulation domain-containing protein 1237634 5322005 Smed_1159 Sinorhizobium medicae WSM419 sporulation domain-containing protein YP_001326845.1 1234734 D 366394 CDS YP_001326846.1 150396379 5322006 1237755..1238789 1 NC_009636.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sme:SMc02071 putative hydrolase glycosidase protein; beta-N-acetylhexosaminidase 1238789 5322006 Smed_1160 Sinorhizobium medicae WSM419 beta-N-acetylhexosaminidase YP_001326846.1 1237755 D 366394 CDS YP_001326847.1 150396380 5322007 1238891..1239709 1 NC_009636.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: sme:SMc02070 putative segregation and condensation protein A; chromosome segregation and condensation protein ScpA 1239709 5322007 Smed_1161 Sinorhizobium medicae WSM419 chromosome segregation and condensation protein ScpA YP_001326847.1 1238891 D 366394 CDS YP_001326848.1 150396381 5322008 1239702..1240430 1 NC_009636.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: sme:SMc02069 putative segregation and condensation protein B; putative transcriptional regulator 1240430 5322008 Smed_1162 Sinorhizobium medicae WSM419 putative transcriptional regulator YP_001326848.1 1239702 D 366394 CDS YP_001326849.1 150396382 5322009 1240498..1241616 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02068 putative ABC transporter ATP-binding protein; ABC transporter-like protein 1241616 5322009 Smed_1163 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001326849.1 1240498 D 366394 CDS YP_001326850.1 150396383 5322010 1241855..1242061 1 NC_009636.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase A 1242061 tatA 5322010 tatA Sinorhizobium medicae WSM419 twin arginine translocase A YP_001326850.1 1241855 D 366394 CDS YP_001326851.1 150396384 5322011 1242134..1242802 1 NC_009636.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 1242802 5322011 Smed_1165 Sinorhizobium medicae WSM419 sec-independent translocase YP_001326851.1 1242134 D 366394 CDS YP_001326852.1 150396385 5322012 1242799..1243641 1 NC_009636.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: sme:SMc02065 putative SEC-independent translocase transmembrane protein; Sec-independent protein translocase subunit TatC 1243641 5322012 Smed_1166 Sinorhizobium medicae WSM419 Sec-independent protein translocase subunit TatC YP_001326852.1 1242799 D 366394 CDS YP_001326853.1 150396386 5322013 1243773..1245056 1 NC_009636.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1245056 5322013 Smed_1167 Sinorhizobium medicae WSM419 seryl-tRNA synthetase YP_001326853.1 1243773 D 366394 CDS YP_001326854.1 150396387 5322014 1245158..1245928 1 NC_009636.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1245928 surE 5322014 surE Sinorhizobium medicae WSM419 stationary phase survival protein SurE YP_001326854.1 1245158 D 366394 CDS YP_001326855.1 150396388 5322015 1245925..1246578 1 NC_009636.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1246578 pcm 5322015 pcm Sinorhizobium medicae WSM419 protein-L-isoaspartate O-methyltransferase YP_001326855.1 1245925 D 366394 CDS YP_001326856.1 150396389 5322016 1246741..1247391 1 NC_009636.1 KEGG: sme:SMc02061 biotin-regulated protein; biotin-regulated protein 1247391 5322016 Smed_1170 Sinorhizobium medicae WSM419 biotin-regulated protein YP_001326856.1 1246741 D 366394 CDS YP_001326857.1 150396390 5322017 1247627..1249156 1 NC_009636.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: sme:SMc02060 lipoprotein precursor; peptidase M23B 1249156 5322017 Smed_1171 Sinorhizobium medicae WSM419 peptidase M23B YP_001326857.1 1247627 D 366394 CDS YP_001326858.1 150396391 5322018 complement(1249560..1250435) 1 NC_009636.1 PFAM: protein of unknown function DUF815; KEGG: sme:SMc02059 hypothetical protein; hypothetical protein 1250435 5322018 Smed_1172 Sinorhizobium medicae WSM419 hypothetical protein YP_001326858.1 1249560 R 366394 CDS YP_001326859.1 150396392 5322019 1250772..1251104 1 NC_009636.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: sme:SMc02058 probable YAJC protein; preprotein translocase subunit YajC 1251104 5322019 Smed_1173 Sinorhizobium medicae WSM419 preprotein translocase subunit YajC YP_001326859.1 1250772 D 366394 CDS YP_001326860.1 150396393 5322020 1251265..1253841 1 NC_009636.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1253841 5322020 Smed_1174 Sinorhizobium medicae WSM419 bifunctional preprotein translocase subunit SecD/SecF YP_001326860.1 1251265 D 366394 CDS YP_001326861.1 150396394 5322021 1253844..1254230 1 NC_009636.1 PFAM: protein of unknown function DUF498; KEGG: sme:SMc02056 hypothetical protein; hypothetical protein 1254230 5322021 Smed_1175 Sinorhizobium medicae WSM419 hypothetical protein YP_001326861.1 1253844 D 366394 CDS YP_001326862.1 150396395 5322022 1254252..1255094 1 NC_009636.1 KEGG: sme:SMc02055 putative phytoene synthase protein; putative phytoene synthase 1255094 5322022 Smed_1176 Sinorhizobium medicae WSM419 putative phytoene synthase YP_001326862.1 1254252 D 366394 CDS YP_001326863.1 150396396 5322023 1255176..1255631 1 NC_009636.1 KEGG: sme:SMc02054 hypothetical protein; hypothetical protein 1255631 5322023 Smed_1177 Sinorhizobium medicae WSM419 hypothetical protein YP_001326863.1 1255176 D 366394 CDS YP_001326864.1 150396397 5322024 complement(1255641..1257083) 1 NC_009636.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1257083 5322024 Smed_1178 Sinorhizobium medicae WSM419 tRNA (uracil-5-)-methyltransferase Gid YP_001326864.1 1255641 R 366394 CDS YP_001326865.1 150396398 5322025 complement(1257175..1257318) 1 NC_009636.1 PFAM: protein of unknown function DUF1127; KEGG: sme:SMc02052 hypothetical protein; hypothetical protein 1257318 5322025 Smed_1179 Sinorhizobium medicae WSM419 hypothetical protein YP_001326865.1 1257175 R 366394 CDS YP_001326866.1 150396399 5322026 complement(1257614..1257814) 1 NC_009636.1 PFAM: protein of unknown function DUF1127; KEGG: sme:SMc02051 hypothetical protein; hypothetical protein 1257814 5322026 Smed_1180 Sinorhizobium medicae WSM419 hypothetical protein YP_001326866.1 1257614 R 366394 CDS YP_001326867.1 150396400 5322028 1259019..1260494 1 NC_009636.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1260494 tig 5322028 tig Sinorhizobium medicae WSM419 trigger factor YP_001326867.1 1259019 D 366394 CDS YP_001326868.1 150396401 5322029 complement(1260884..1263748) 1 NC_009636.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1263748 5322029 Smed_1182 Sinorhizobium medicae WSM419 glycine dehydrogenase YP_001326868.1 1260884 R 366394 CDS YP_001326869.1 150396402 5322030 complement(1263748..1264110) 1 NC_009636.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1264110 5322030 Smed_1183 Sinorhizobium medicae WSM419 glycine cleavage system protein H YP_001326869.1 1263748 R 366394 CDS YP_001326870.1 150396403 5322031 complement(1264127..1265266) 1 NC_009636.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1265266 gcvT 5322031 gcvT Sinorhizobium medicae WSM419 glycine cleavage system aminomethyltransferase T YP_001326870.1 1264127 R 366394 CDS YP_001326871.1 150396404 5322032 1265651..1266043 1 NC_009636.1 KEGG: rle:RL0897 hypothetical protein; hypothetical protein 1266043 5322032 Smed_1185 Sinorhizobium medicae WSM419 hypothetical protein YP_001326871.1 1265651 D 366394 CDS YP_001326872.1 150396405 5322033 1266132..1267115 1 NC_009636.1 PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: sme:SMc01242 signal peptide protein; hypothetical protein 1267115 5322033 Smed_1186 Sinorhizobium medicae WSM419 hypothetical protein YP_001326872.1 1266132 D 366394 CDS YP_001326873.1 150396406 5322034 complement(1267210..1267575) 1 NC_009636.1 KEGG: sme:SMc01241 hypothetical protein; hypothetical protein 1267575 5322034 Smed_1187 Sinorhizobium medicae WSM419 hypothetical protein YP_001326873.1 1267210 R 366394 CDS YP_001326874.1 150396407 5322035 complement(1268674..1268835) 1 NC_009636.1 KEGG: sme:SMc01239 hypothetical/unknown transmembrane protein; hypothetical protein 1268835 5322035 Smed_1188 Sinorhizobium medicae WSM419 hypothetical protein YP_001326874.1 1268674 R 366394 CDS YP_001326875.1 150396408 5322037 complement(1270069..1271907) 1 NC_009636.1 KEGG: rpe:RPE_2428 hypothetical protein; hypothetical protein 1271907 5322037 Smed_1190 Sinorhizobium medicae WSM419 hypothetical protein YP_001326875.1 1270069 R 366394 CDS YP_001326876.1 150396409 5322038 complement(1271904..1272986) 1 NC_009636.1 KEGG: rpb:RPB_2537 hypothetical protein; hypothetical protein 1272986 5322038 Smed_1191 Sinorhizobium medicae WSM419 hypothetical protein YP_001326876.1 1271904 R 366394 CDS YP_001326877.1 150396410 5322039 complement(1273004..1275226) 1 NC_009636.1 KEGG: rpe:RPE_2430 integrase, catalytic region; integrase catalytic subunit 1275226 5322039 Smed_1192 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001326877.1 1273004 R 366394 CDS YP_001326878.1 150396411 5322040 complement(1275242..1275967) 1 NC_009636.1 KEGG: bms:BR0728 hypothetical protein; hypothetical protein 1275967 5322040 Smed_1193 Sinorhizobium medicae WSM419 hypothetical protein YP_001326878.1 1275242 R 366394 CDS YP_001326879.1 150396412 5322041 complement(1275930..1276103) 1 NC_009636.1 hypothetical protein 1276103 5322041 Smed_1194 Sinorhizobium medicae WSM419 hypothetical protein YP_001326879.1 1275930 R 366394 CDS YP_001326880.1 150396413 5322042 complement(1276181..1276582) 1 NC_009636.1 hypothetical protein 1276582 5322042 Smed_1195 Sinorhizobium medicae WSM419 hypothetical protein YP_001326880.1 1276181 R 366394 CDS YP_001326881.1 150396414 5322043 1277378..1278058 1 NC_009636.1 hypothetical protein 1278058 5322043 Smed_1196 Sinorhizobium medicae WSM419 hypothetical protein YP_001326881.1 1277378 D 366394 CDS YP_001326882.1 150396415 5322044 complement(1278066..1278629) 1 NC_009636.1 PFAM: PilT protein domain protein; KEGG: rle:RL2176 hypothetical protein; PilT domain-containing protein 1278629 5322044 Smed_1197 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001326882.1 1278066 R 366394 CDS YP_001326883.1 150396416 5322045 complement(1279081..1280253) 1 NC_009636.1 KEGG: rpe:RPE_1494 hypothetical protein; hypothetical protein 1280253 5322045 Smed_1198 Sinorhizobium medicae WSM419 hypothetical protein YP_001326883.1 1279081 R 366394 CDS YP_001326884.1 150396417 5322046 complement(1280261..1280677) 1 NC_009636.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mes:Meso_4426 transcriptional regulator, MerR family; MerR family transcriptional regulator 1280677 5322046 Smed_1199 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001326884.1 1280261 R 366394 CDS YP_001326885.1 150396418 5322047 1280952..1281113 1 NC_009636.1 hypothetical protein 1281113 5322047 Smed_1200 Sinorhizobium medicae WSM419 hypothetical protein YP_001326885.1 1280952 D 366394 CDS YP_001326886.1 150396419 5322048 1281258..1281884 1 NC_009636.1 KEGG: rle:RL1929 hypothetical protein; hypothetical protein 1281884 5322048 Smed_1201 Sinorhizobium medicae WSM419 hypothetical protein YP_001326886.1 1281258 D 366394 CDS YP_001326887.1 150396420 5322049 1281895..1283778 1 NC_009636.1 PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rle:RL1930 putative ATP-dependent hydrolase protein; ATPase central domain-containing protein 1283778 5322049 Smed_1202 Sinorhizobium medicae WSM419 ATPase central domain-containing protein YP_001326887.1 1281895 D 366394 CDS YP_001326888.1 150396421 5322050 1283788..1283919 1 NC_009636.1 hypothetical protein 1283919 5322050 Smed_1203 Sinorhizobium medicae WSM419 hypothetical protein YP_001326888.1 1283788 D 366394 CDS YP_001326889.1 150396422 5322051 1284179..1284985 1 NC_009636.1 hypothetical protein 1284985 5322051 Smed_1204 Sinorhizobium medicae WSM419 hypothetical protein YP_001326889.1 1284179 D 366394 CDS YP_001326890.1 150396423 5322052 complement(1285540..1287438) 1 NC_009636.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rle:RL1932 putative modification methylase; DNA-cytosine methyltransferase 1287438 5322052 Smed_1205 Sinorhizobium medicae WSM419 DNA-cytosine methyltransferase YP_001326890.1 1285540 R 366394 CDS YP_001326891.1 150396424 5322053 1287909..1289048 1 NC_009636.1 KEGG: xcv:XCV4346 hypothetical protein; hypothetical protein 1289048 5322053 Smed_1206 Sinorhizobium medicae WSM419 hypothetical protein YP_001326891.1 1287909 D 366394 CDS YP_001326892.1 150396425 5322054 complement(1289077..1291845) 1 NC_009636.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: bja:blr6267 transcriptional regulator; transcriptional regulator 1291845 5322054 Smed_1207 Sinorhizobium medicae WSM419 transcriptional regulator YP_001326892.1 1289077 R 366394 CDS YP_001326893.1 150396426 5322055 1292044..1292457 1 NC_009636.1 PFAM: protein of unknown function DUF336; KEGG: ret:RHE_CH02038 hypothetical protein; hypothetical protein 1292457 5322055 Smed_1208 Sinorhizobium medicae WSM419 hypothetical protein YP_001326893.1 1292044 D 366394 CDS YP_001326894.1 150396427 5322056 1292493..1293305 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH02037 probable short-chain dehydrogenase protein; short chain dehydrogenase 1293305 5322056 Smed_1209 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001326894.1 1292493 D 366394 CDS YP_001326895.1 150396428 5322057 1293387..1293890 1 NC_009636.1 KEGG: ret:RHE_CH02036 hypothetical protein; ketosteroid isomerase-like protein 1293890 5322057 Smed_1210 Sinorhizobium medicae WSM419 ketosteroid isomerase-like protein YP_001326895.1 1293387 D 366394 CDS YP_001326896.1 150396429 5322058 1293918..1294742 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pfo:Pfl_3278 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1294742 5322058 Smed_1211 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326896.1 1293918 D 366394 CDS YP_001326897.1 150396430 5322059 1294901..1296712 1 NC_009636.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sme:SMb21555 putative potassium-efflux protein; potassium efflux system protein 1296712 5322059 Smed_1212 Sinorhizobium medicae WSM419 potassium efflux system protein YP_001326897.1 1294901 D 366394 CDS YP_001326898.1 150396431 5322060 1296732..1297913 1 NC_009636.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rle:pRL80073 putative cysteine desulfurase; classV aminotransferase 1297913 5322060 Smed_1213 Sinorhizobium medicae WSM419 classV aminotransferase YP_001326898.1 1296732 D 366394 CDS YP_001326899.1 150396432 5322061 1298010..1298720 1 NC_009636.1 PFAM: ChaC family protein; KEGG: rle:pRL100236 putative cation transport protein ChaC; ChaC family protein 1298720 5322061 Smed_1214 Sinorhizobium medicae WSM419 ChaC family protein YP_001326899.1 1298010 D 366394 CDS YP_001326900.1 150396433 5322062 complement(1298896..1299180) 1 NC_009636.1 hypothetical protein 1299180 5322062 Smed_1215 Sinorhizobium medicae WSM419 hypothetical protein YP_001326900.1 1298896 R 366394 CDS YP_001326901.1 150396434 5322063 complement(1300036..1300911) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: rle:RL1938 putative phosphatase; metallophosphoesterase 1300911 5322063 Smed_1216 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001326901.1 1300036 R 366394 CDS YP_001326902.1 150396435 5322064 complement(1301015..1301653) 1 NC_009636.1 KEGG: vch:VCA0361 hypothetical protein; hypothetical protein 1301653 5322064 Smed_1217 Sinorhizobium medicae WSM419 hypothetical protein YP_001326902.1 1301015 R 366394 CDS YP_001326903.1 150396436 5322065 complement(1301676..1301966) 1 NC_009636.1 KEGG: rru:Rru_A0810 hypothetical protein; hypothetical protein 1301966 5322065 Smed_1218 Sinorhizobium medicae WSM419 hypothetical protein YP_001326903.1 1301676 R 366394 CDS YP_001326904.1 150396437 5322066 complement(1301983..1303857) 1 NC_009636.1 KEGG: rru:Rru_A0809 hypothetical protein; hypothetical protein 1303857 5322066 Smed_1219 Sinorhizobium medicae WSM419 hypothetical protein YP_001326904.1 1301983 R 366394 CDS YP_001326905.1 150396438 5322067 1303876..1304346 1 NC_009636.1 PFAM: transposase IS3/IS911 family protein; KEGG: sme:SMc03278 putative transposase number 1 for insertion sequence ISRM28; transposase IS3/IS911 family protein 1304346 5322067 Smed_1220 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001326905.1 1303876 D 366394 CDS YP_001326906.1 150396439 5322068 1304343..1304699 1 NC_009636.1 PFAM: IS66 Orf2 family protein; KEGG: sme:SMc03279 putative transposase number 2 for insertion sequence ISRM28; IS66 Orf2 family protein 1304699 5322068 Smed_1221 Sinorhizobium medicae WSM419 IS66 Orf2 family protein YP_001326906.1 1304343 D 366394 CDS YP_001326907.1 150396440 5322069 1304748..1305509 1 NC_009636.1 PFAM: transposase IS66; KEGG: sme:SMc03280 putative transposase number 3 for insertion sequence ISRM28; transposase IS66 1305509 5322069 Smed_1222 Sinorhizobium medicae WSM419 transposase IS66 YP_001326907.1 1304748 D 366394 CDS YP_001326908.1 150396441 5322070 1306022..1307281 1 NC_009636.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sme:SMb21045 putative reverse transcriptasematurase protein; RNA-directed DNA polymerase 1307281 5322070 Smed_1223 Sinorhizobium medicae WSM419 RNA-directed DNA polymerase YP_001326908.1 1306022 D 366394 CDS YP_001326909.1 150396442 5322071 1307335..1308207 1 NC_009636.1 PFAM: transposase IS66; KEGG: bms:BRA0556 IS66 family element, orf3, putative; transposase IS66 1308207 5322071 Smed_1224 Sinorhizobium medicae WSM419 transposase IS66 YP_001326909.1 1307335 D 366394 CDS YP_001326910.1 150396443 5322072 1308204..1308767 1 NC_009636.1 TIGRFAM: yecA family protein; KEGG: sme:SMc03284 hypothetical/unknown protein; yecA family protein 1308767 5322072 Smed_1225 Sinorhizobium medicae WSM419 yecA family protein YP_001326910.1 1308204 D 366394 CDS YP_001326911.1 150396444 5322073 complement(1308825..1308956) 1 NC_009636.1 KEGG: rru:Rru_A0809 hypothetical protein; hypothetical protein 1308956 5322073 Smed_1226 Sinorhizobium medicae WSM419 hypothetical protein YP_001326911.1 1308825 R 366394 CDS YP_001326912.1 150396445 5322074 complement(1308943..1309464) 1 NC_009636.1 KEGG: bps:BPSL0567 hypothetical protein; hypothetical protein 1309464 5322074 Smed_1227 Sinorhizobium medicae WSM419 hypothetical protein YP_001326912.1 1308943 R 366394 CDS YP_001326913.1 150396446 5322075 complement(1309461..1310042) 1 NC_009636.1 KEGG: dps:DP2304 hypothetical protein; hypothetical protein 1310042 5322075 Smed_1228 Sinorhizobium medicae WSM419 hypothetical protein YP_001326913.1 1309461 R 366394 CDS YP_001326914.1 150396447 5322076 complement(1310585..1311133) 1 NC_009636.1 KEGG: rle:RL2176 hypothetical protein; hypothetical protein 1311133 5322076 Smed_1229 Sinorhizobium medicae WSM419 hypothetical protein YP_001326914.1 1310585 R 366394 CDS YP_001326915.1 150396448 5322077 complement(1311269..1312345) 1 NC_009636.1 PFAM: Patatin; KEGG: rpd:RPD_2292 patatin; patatin 1312345 5322077 Smed_1230 Sinorhizobium medicae WSM419 patatin YP_001326915.1 1311269 R 366394 CDS YP_001326916.1 150396449 5322078 complement(1312302..1312793) 1 NC_009636.1 KEGG: mes:Meso_0549 hypothetical protein; hypothetical protein 1312793 5322078 Smed_1231 Sinorhizobium medicae WSM419 hypothetical protein YP_001326916.1 1312302 R 366394 CDS YP_001326917.1 150396450 5322079 complement(1312774..1314096) 1 NC_009636.1 KEGG: rle:RL1943 hypothetical protein; hypothetical protein 1314096 5322079 Smed_1232 Sinorhizobium medicae WSM419 hypothetical protein YP_001326917.1 1312774 R 366394 CDS YP_001326918.1 150396451 5322080 complement(1314286..1318077) 1 NC_009636.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1318077 5322080 Smed_1233 Sinorhizobium medicae WSM419 ribonucleotide-diphosphate reductase subunit alpha YP_001326918.1 1314286 R 366394 CDS YP_001326919.1 150396452 5322081 complement(1318778..1319581) 1 NC_009636.1 PFAM: protein of unknown function DUF72; KEGG: sme:SMc01236 hypothetical protein; hypothetical protein 1319581 5322081 Smed_1234 Sinorhizobium medicae WSM419 hypothetical protein YP_001326919.1 1318778 R 366394 CDS YP_001326920.1 150396453 5322082 complement(1319713..1322634) 1 NC_009636.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1322634 uvrA 5322082 uvrA Sinorhizobium medicae WSM419 excinuclease ABC subunit A YP_001326920.1 1319713 R 366394 CDS YP_001326921.1 150396454 5322083 1322921..1323433 1 NC_009636.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1323433 5322083 Smed_1236 Sinorhizobium medicae WSM419 single-stranded DNA-binding protein YP_001326921.1 1322921 D 366394 CDS YP_001326922.1 150396455 5322084 complement(1323506..1325914) 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMa1680 hypothetical protein; hypothetical protein 1325914 5322084 Smed_1237 Sinorhizobium medicae WSM419 hypothetical protein YP_001326922.1 1323506 R 366394 CDS YP_001326923.1 150396456 5322085 complement(1325958..1326971) 1 NC_009636.1 KEGG: sme:SMa1682 NapD-like protein; NapD-like protein 1326971 5322085 Smed_1238 Sinorhizobium medicae WSM419 NapD-like protein YP_001326923.1 1325958 R 366394 CDS YP_001326924.1 150396457 5322086 complement(1327067..1328731) 1 NC_009636.1 PFAM: sulfatase; KEGG: sme:SMa1683 putative arylsulfatase; sulfatase 1328731 5322086 Smed_1239 Sinorhizobium medicae WSM419 sulfatase YP_001326924.1 1327067 R 366394 CDS YP_001326925.1 150396458 5322087 complement(1329065..1329694) 1 NC_009636.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sme:SMc01232 hypothetical transmembrane protein; multiple antibiotic resistance (MarC)-like protein 1329694 5322087 Smed_1240 Sinorhizobium medicae WSM419 multiple antibiotic resistance (MarC)-like protein YP_001326925.1 1329065 R 366394 CDS YP_001326926.1 150396459 5322088 1329990..1332785 1 NC_009636.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1332785 5322088 Smed_1241 Sinorhizobium medicae WSM419 DNA gyrase subunit A YP_001326926.1 1329990 D 366394 CDS YP_001326927.1 150396460 5322089 complement(1332956..1333942) 1 NC_009636.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc01230 putative transglycosylase transmembrane protein; lytic transglycosylase 1333942 5322089 Smed_1242 Sinorhizobium medicae WSM419 lytic transglycosylase YP_001326927.1 1332956 R 366394 CDS YP_001326928.1 150396461 5322090 complement(1334015..1334524) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01229 putative acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 1334524 5322090 Smed_1243 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001326928.1 1334015 R 366394 CDS YP_001326929.1 150396462 5322091 complement(1334560..1335378) 1 NC_009636.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: sme:SMc01228 putative antibiotic resistance (kinase) protein; aminoglycoside/hydroxyurea antibiotic resistance kinase 1335378 5322091 Smed_1244 Sinorhizobium medicae WSM419 aminoglycoside/hydroxyurea antibiotic resistance kinase YP_001326929.1 1334560 R 366394 CDS YP_001326930.1 150396463 5322092 complement(1335436..1336557) 1 NC_009636.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sme:SMc01227 putative glycerol trinitrate (GTN) reductase protein; NADH:flavin oxidoreductase 1336557 5322092 Smed_1245 Sinorhizobium medicae WSM419 NADH:flavin oxidoreductase YP_001326930.1 1335436 R 366394 CDS YP_001326931.1 150396464 5322093 complement(1336608..1336898) 1 NC_009636.1 SMART: regulatory protein ArsR; KEGG: sme:SMc01226 putative transcription regulator protein; regulatory protein ArsR 1336898 5322093 Smed_1246 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001326931.1 1336608 R 366394 CDS YP_001326932.1 150396465 5322094 complement(1337537..1338433) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01225 putative transcription regulator protein; LysR family transcriptional regulator 1338433 5322094 Smed_1247 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326932.1 1337537 R 366394 CDS YP_001326933.1 150396466 5322095 complement(1338665..1339639) 1 NC_009636.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc01224 probable thioredoxin reductase protein; thioredoxin reductase 1339639 5322095 Smed_1248 Sinorhizobium medicae WSM419 thioredoxin reductase YP_001326933.1 1338665 R 366394 CDS YP_001326934.1 150396467 5322096 1340078..1340548 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc01223 putative transcription regulator protein; AsnC family transcriptional regulator 1340548 5322096 Smed_1249 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001326934.1 1340078 D 366394 CDS YP_001326935.1 150396468 5322097 1340646..1341458 1 NC_009636.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMc01222 putative lipopolysaccharide core biosynthesis glycosyl transferase protein; glycosyl transferase family protein 1341458 5322097 Smed_1250 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001326935.1 1340646 D 366394 CDS YP_001326936.1 150396469 5322098 1341477..1342508 1 NC_009636.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMc01221 putative lipopolysaccharide core biosynthesis glycosyl transferase protein; phosphatidylserine decarboxylase 1342508 5322098 Smed_1251 Sinorhizobium medicae WSM419 phosphatidylserine decarboxylase YP_001326936.1 1341477 D 366394 CDS YP_001326937.1 150396470 5322099 1342505..1343527 1 NC_009636.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMc01220 putative lipopolysaccharide core biosynthesis glycosyl transferase protein; phosphatidylserine decarboxylase 1343527 5322099 Smed_1252 Sinorhizobium medicae WSM419 phosphatidylserine decarboxylase YP_001326937.1 1342505 D 366394 CDS YP_001326938.1 150396471 5322100 complement(1343557..1344612) 1 NC_009636.1 PFAM: glycosyl transferase group 1; KEGG: sme:SMc01219 putative lipopolysaccharide core biosynthesis mannosyltransferase protein; group 1 glycosyl transferase 1344612 5322100 Smed_1253 Sinorhizobium medicae WSM419 group 1 glycosyl transferase YP_001326938.1 1343557 R 366394 CDS YP_001326939.1 150396472 5322101 complement(1344698..1345174) 1 NC_009636.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1345174 greA 5322101 greA Sinorhizobium medicae WSM419 transcription elongation factor GreA YP_001326939.1 1344698 R 366394 CDS YP_001326940.1 150396473 5322102 1345464..1346942 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc01217 putative transport transmembrane protein; major facilitator superfamily transporter 1346942 5322102 Smed_1255 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326940.1 1345464 D 366394 CDS YP_001326941.1 150396474 5322103 complement(1346887..1347198) 1 NC_009636.1 KEGG: sme:SMc01216 hypothetical protein; hypothetical protein 1347198 5322103 Smed_1256 Sinorhizobium medicae WSM419 hypothetical protein YP_001326941.1 1346887 R 366394 CDS YP_001326942.1 150396475 5322104 complement(1347330..1350821) 1 NC_009636.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1350821 carB 5322104 carB Sinorhizobium medicae WSM419 carbamoyl phosphate synthase large subunit YP_001326942.1 1347330 R 366394 CDS YP_001326943.1 150396476 5322105 complement(1351031..1352065) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc01214 putative zinc-containing alcohol dehydrogenase protein; alcohol dehydrogenase 1352065 5322105 Smed_1258 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001326943.1 1351031 R 366394 CDS YP_001326944.1 150396477 5322106 1352284..1353219 1 NC_009636.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sme:SMc01213 hypothetical transmembrane protein; hypothetical protein 1353219 5322106 Smed_1259 Sinorhizobium medicae WSM419 hypothetical protein YP_001326944.1 1352284 D 366394 CDS YP_001326945.1 150396478 5322107 complement(1353263..1354261) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: rle:RL3415 putative oxidoreductase; aldo/keto reductase 1354261 5322107 Smed_1260 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001326945.1 1353263 R 366394 CDS YP_001326946.1 150396479 5322108 1354379..1355287 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A2875 transcriptional regulator, LysR family; LysR family transcriptional regulator 1355287 5322108 Smed_1261 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001326946.1 1354379 D 366394 CDS YP_001326947.1 150396480 5322109 1355444..1356709 1 NC_009636.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMc01212 putative transport transmembrane protein; major facilitator superfamily transporter 1356709 5322109 Smed_1262 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326947.1 1355444 D 366394 CDS YP_001326948.1 150396481 5322110 1356867..1358270 1 NC_009636.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sme:SMc01211 hypothetical transmembrane protein; MATE efflux family protein 1358270 5322110 Smed_1263 Sinorhizobium medicae WSM419 MATE efflux family protein YP_001326948.1 1356867 D 366394 CDS YP_001326949.1 150396482 5322111 1358823..1359368 1 NC_009636.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1359368 coaD 5322111 coaD Sinorhizobium medicae WSM419 phosphopantetheine adenylyltransferase YP_001326949.1 1358823 D 366394 CDS YP_001326950.1 150396483 5322112 1359393..1359983 1 NC_009636.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sme:SMc01700 putative peptidyl-prolyl cis-trans isomerase A signal peptide protein; cyclophilin type peptidyl-prolyl cis-trans isomerase 1359983 5322112 Smed_1265 Sinorhizobium medicae WSM419 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001326950.1 1359393 D 366394 CDS YP_001326951.1 150396484 5322113 1360008..1360517 1 NC_009636.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sme:SMc01208 putative peptidyl-prolyl cis-trans isomerase B protein; cyclophilin type peptidyl-prolyl cis-trans isomerase 1360517 5322113 Smed_1266 Sinorhizobium medicae WSM419 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001326951.1 1360008 D 366394 CDS YP_001326952.1 150396485 5322114 1360595..1361677 1 NC_009636.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1361677 queA 5322114 queA Sinorhizobium medicae WSM419 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001326952.1 1360595 D 366394 CDS YP_001326953.1 150396486 5322115 1361678..1362808 1 NC_009636.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1362808 tgt 5322115 tgt Sinorhizobium medicae WSM419 queuine tRNA-ribosyltransferase YP_001326953.1 1361678 D 366394 CDS YP_001326954.1 150396487 5322116 complement(1362916..1363800) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; SEC-C motif domain protein; KEGG: sme:SMc01204 putative transmembrane oxidoreductase protein oxidoreductase; short-chain dehydrogenase/reductase SDR 1363800 5322116 Smed_1269 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326954.1 1362916 R 366394 CDS YP_001326955.1 150396488 5322117 complement(1363797..1364582) 1 NC_009636.1 KEGG: rle:RL3837 hypothetical protein; hypothetical protein 1364582 5322117 Smed_1270 Sinorhizobium medicae WSM419 hypothetical protein YP_001326955.1 1363797 R 366394 CDS YP_001326956.1 150396489 5322118 complement(1364593..1365180) 1 NC_009636.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: sme:SMc01203 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1365180 5322118 Smed_1271 Sinorhizobium medicae WSM419 isoprenylcysteine carboxyl methyltransferase YP_001326956.1 1364593 R 366394 CDS YP_001326957.1 150396490 5322119 complement(1365350..1365934) 1 NC_009636.1 KEGG: sme:SMc01202 putative lipoprotein; putative lipoprotein 1365934 5322119 Smed_1272 Sinorhizobium medicae WSM419 putative lipoprotein YP_001326957.1 1365350 R 366394 CDS YP_001326958.1 150396491 5322120 complement(1366425..1367006) 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc01200 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1367006 5322120 Smed_1273 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001326958.1 1366425 R 366394 CDS YP_001326959.1 150396492 5322121 1367174..1367929 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc01698 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1367929 5322121 Smed_1274 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001326959.1 1367174 D 366394 CDS YP_001326960.1 150396493 5322122 complement(1368013..1369179) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL2426 putative transmembrane protein; major facilitator superfamily transporter 1369179 5322122 Smed_1275 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001326960.1 1368013 R 366394 CDS YP_001326961.1 150396494 5322123 1369417..1370916 1 NC_009636.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_4; KEGG: sme:SMc01198 hypothetical protein; transcriptional regulator domain-containing protein 1370916 5322123 Smed_1276 Sinorhizobium medicae WSM419 transcriptional regulator domain-containing protein YP_001326961.1 1369417 D 366394 CDS YP_001326962.1 150396495 5322124 complement(1370954..1371346) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: pde:Pden_2817 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1371346 5322124 Smed_1277 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001326962.1 1370954 R 366394 CDS YP_001326963.1 150396496 5322125 1371613..1373427 1 NC_009636.1 KEGG: mlo:mll7009 hypothetical protein; hypothetical protein 1373427 5322125 Smed_1278 Sinorhizobium medicae WSM419 hypothetical protein YP_001326963.1 1371613 D 366394 CDS YP_001326964.1 150396497 5322126 1373424..1374722 1 NC_009636.1 PFAM: type III effector Hrp-dependent outers; KEGG: sme:SMb20394 hypothetical protein; Hrp-dependent type III effector protein 1374722 5322126 Smed_1279 Sinorhizobium medicae WSM419 Hrp-dependent type III effector protein YP_001326964.1 1373424 D 366394 CDS YP_001326965.1 150396498 5322127 1374953..1375714 1 NC_009636.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: sme:SMb21565 hypothetical protein; hypothetical protein 1375714 5322127 Smed_1280 Sinorhizobium medicae WSM419 hypothetical protein YP_001326965.1 1374953 D 366394 CDS YP_001326966.1 150396499 5322128 complement(1375786..1377414) 1 NC_009636.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and the high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is associated with a groES gene and is required for regulation of the early genes involved in nodular formation; chaperonin GroEL 1377414 groEL 5322128 groEL Sinorhizobium medicae WSM419 chaperonin GroEL YP_001326966.1 1375786 R 366394 CDS YP_001326967.1 150396500 5322129 complement(1377460..1377774) 1 NC_009636.1 PFAM: chaperonin Cpn10; KEGG: ret:RHE_CH01238 10 kDa chaperonin, heat shock protein; chaperonin Cpn10 1377774 5322129 Smed_1282 Sinorhizobium medicae WSM419 chaperonin Cpn10 YP_001326967.1 1377460 R 366394 CDS YP_001326968.1 150396501 5322130 1378047..1378319 1 NC_009636.1 PFAM: Usg family protein; KEGG: sme:SMb21568 hypothetical conserved hyothetical protein, in Caulobacter crescentus located in trpFBA operon; Usg family protein 1378319 5322130 Smed_1283 Sinorhizobium medicae WSM419 Usg family protein YP_001326968.1 1378047 D 366394 CDS YP_001326969.1 150396502 5322131 1378416..1378706 1 NC_009636.1 KEGG: ret:RHE_PF00328 hypothetical protein; hypothetical protein 1378706 5322131 Smed_1284 Sinorhizobium medicae WSM419 hypothetical protein YP_001326969.1 1378416 D 366394 CDS YP_001326970.1 150396503 5322132 complement(1378802..1380895) 1 NC_009636.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sme:SMa0257 probable methylamine; NADH:flavin oxidoreductase 1380895 5322132 Smed_1285 Sinorhizobium medicae WSM419 NADH:flavin oxidoreductase YP_001326970.1 1378802 R 366394 CDS YP_001326971.1 150396504 5322133 complement(1381534..1382907) 1 NC_009636.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00137 putative insertion sequence transposase protein; integrase catalytic subunit 1382907 5322133 Smed_1286 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001326971.1 1381534 R 366394 CDS YP_001326972.1 150396505 5322134 complement(1383033..1384034) 1 NC_009636.1 PFAM: Integrase catalytic region; KEGG: sme:SMa2047 TRm24 putative transposase; integrase catalytic subunit 1384034 5322134 Smed_1287 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001326972.1 1383033 R 366394 CDS YP_001326973.1 150396506 5322135 complement(1384194..1385048) 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc01194 putative PhnP protein; beta-lactamase domain-containing protein 1385048 5322135 Smed_1288 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001326973.1 1384194 R 366394 CDS YP_001326974.1 150396507 5322136 complement(1385052..1385831) 1 NC_009636.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: sme:SMc01193 putative deoxyribonuclease; TatD family hydrolase 1385831 5322136 Smed_1289 Sinorhizobium medicae WSM419 TatD family hydrolase YP_001326974.1 1385052 R 366394 CDS YP_001326975.1 150396508 5322137 complement(1385846..1387396) 1 NC_009636.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1387396 5322137 Smed_1290 Sinorhizobium medicae WSM419 methionyl-tRNA synthetase YP_001326975.1 1385846 R 366394 CDS YP_001326976.1 150396509 5322138 complement(1387600..1388631) 1 NC_009636.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1388631 5322138 Smed_1291 Sinorhizobium medicae WSM419 DNA polymerase III subunit delta' YP_001326976.1 1387600 R 366394 CDS YP_001326977.1 150396510 5322139 complement(1388628..1389332) 1 NC_009636.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1389332 5322139 Smed_1292 Sinorhizobium medicae WSM419 thymidylate kinase YP_001326977.1 1388628 R 366394 CDS YP_001326978.1 150396511 5322140 complement(1389390..1390544) 1 NC_009636.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: sme:SMc01188 putative penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein; serine-type D-Ala-D-Ala carboxypeptidase 1390544 5322140 Smed_1293 Sinorhizobium medicae WSM419 serine-type D-Ala-D-Ala carboxypeptidase YP_001326978.1 1389390 R 366394 CDS YP_001326979.1 150396512 5322141 complement(1390601..1391641) 1 NC_009636.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: sme:SMc01187 putative RARE lipoprotein A precursor; rare lipoprotein A 1391641 5322141 Smed_1294 Sinorhizobium medicae WSM419 rare lipoprotein A YP_001326979.1 1390601 R 366394 CDS YP_001326980.1 150396513 5322143 1392328..1392552 1 NC_009636.1 hypothetical protein 1392552 5322143 Smed_1295 Sinorhizobium medicae WSM419 hypothetical protein YP_001326980.1 1392328 D 366394 CDS YP_001326981.1 150396514 5322144 1392610..1392855 1 NC_009636.1 KEGG: rle:pRL90054 hypothetical protein; hypothetical protein 1392855 5322144 Smed_1296 Sinorhizobium medicae WSM419 hypothetical protein YP_001326981.1 1392610 D 366394 CDS YP_001326982.1 150396515 5322145 complement(1393030..1393356) 1 NC_009636.1 hypothetical protein 1393356 5322145 Smed_1297 Sinorhizobium medicae WSM419 hypothetical protein YP_001326982.1 1393030 R 366394 CDS YP_001326983.1 150396516 5322146 1393439..1393711 1 NC_009636.1 KEGG: bmb:BruAb1_0291 hypothetical protein; hypothetical protein 1393711 5322146 Smed_1298 Sinorhizobium medicae WSM419 hypothetical protein YP_001326983.1 1393439 D 366394 CDS YP_001326984.1 150396517 5322147 1393900..1395969 1 NC_009636.1 KEGG: atc:AGR_pAT_554 hypothetical protein; hypothetical protein 1395969 5322147 Smed_1299 Sinorhizobium medicae WSM419 hypothetical protein YP_001326984.1 1393900 D 366394 CDS YP_001326985.1 150396518 5322148 1395969..1396283 1 NC_009636.1 hypothetical protein 1396283 5322148 Smed_1300 Sinorhizobium medicae WSM419 hypothetical protein YP_001326985.1 1395969 D 366394 CDS YP_001326986.1 150396519 5322149 1396280..1396540 1 NC_009636.1 hypothetical protein 1396540 5322149 Smed_1301 Sinorhizobium medicae WSM419 hypothetical protein YP_001326986.1 1396280 D 366394 CDS YP_001326987.1 150396520 5322150 1396640..1396972 1 NC_009636.1 KEGG: rle:RL2955 hypothetical protein; hypothetical protein 1396972 5322150 Smed_1302 Sinorhizobium medicae WSM419 hypothetical protein YP_001326987.1 1396640 D 366394 CDS YP_001326988.1 150396521 5322151 1397015..1397209 1 NC_009636.1 hypothetical protein 1397209 5322151 Smed_1303 Sinorhizobium medicae WSM419 hypothetical protein YP_001326988.1 1397015 D 366394 CDS YP_001326989.1 150396522 5322152 1397300..1397743 1 NC_009636.1 hypothetical protein 1397743 5322152 Smed_1304 Sinorhizobium medicae WSM419 hypothetical protein YP_001326989.1 1397300 D 366394 CDS YP_001326990.1 150396523 5322153 complement(1397752..1398783) 1 NC_009636.1 TIGRFAM: DNA polymerase LigD ligase region; PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMb20912 putative ATP-dependent DNA ligase protein; DNA polymerase LigD ligase region 1398783 5322153 Smed_1305 Sinorhizobium medicae WSM419 DNA polymerase LigD ligase region YP_001326990.1 1397752 R 366394 CDS YP_001326991.1 150396524 5322154 1398855..1399307 1 NC_009636.1 KEGG: sme:SMb20913 hypothetical protein; hypothetical protein 1399307 5322154 Smed_1306 Sinorhizobium medicae WSM419 hypothetical protein YP_001326991.1 1398855 D 366394 CDS YP_001326992.1 150396525 5322155 1399300..1399515 1 NC_009636.1 KEGG: sme:SMb21682 hypothetical protein; hypothetical protein 1399515 5322155 Smed_1307 Sinorhizobium medicae WSM419 hypothetical protein YP_001326992.1 1399300 D 366394 CDS YP_001326993.1 150396526 5322156 complement(1400014..1400646) 1 NC_009636.1 hypothetical protein 1400646 5322156 Smed_1308 Sinorhizobium medicae WSM419 hypothetical protein YP_001326993.1 1400014 R 366394 CDS YP_001326994.1 150396527 5322157 1400801..1401037 1 NC_009636.1 KEGG: csa:Csal_1402 hypothetical protein; hypothetical protein 1401037 5322157 Smed_1309 Sinorhizobium medicae WSM419 hypothetical protein YP_001326994.1 1400801 D 366394 CDS YP_001326995.1 150396528 5322158 complement(1401717..1402007) 1 NC_009636.1 KEGG: mes:Meso_0246 hypothetical protein; hypothetical protein 1402007 5322158 Smed_1310 Sinorhizobium medicae WSM419 hypothetical protein YP_001326995.1 1401717 R 366394 CDS YP_001326996.1 150396529 5322159 complement(1402004..1402408) 1 NC_009636.1 KEGG: sit:TM1040_0827 hypothetical protein; hypothetical protein 1402408 5322159 Smed_1311 Sinorhizobium medicae WSM419 hypothetical protein YP_001326996.1 1402004 R 366394 CDS YP_001326997.1 150396530 5322160 complement(1402405..1403328) 1 NC_009636.1 PFAM: glycoside hydrolase family 24; Peptidoglycan-binding domain 1 protein; KEGG: mlo:mll0441 hypothetical protein; peptidoglycan binding domain-containing protein 1403328 5322160 Smed_1312 Sinorhizobium medicae WSM419 peptidoglycan binding domain-containing protein YP_001326997.1 1402405 R 366394 CDS YP_001326998.1 150396531 5322161 complement(1403501..1404400) 1 NC_009636.1 hypothetical protein 1404400 5322161 Smed_1313 Sinorhizobium medicae WSM419 hypothetical protein YP_001326998.1 1403501 R 366394 CDS YP_001326999.1 150396532 5322162 complement(1404562..1407012) 1 NC_009636.1 KEGG: nha:Nham_2983 hypothetical protein; hypothetical protein 1407012 5322162 Smed_1314 Sinorhizobium medicae WSM419 hypothetical protein YP_001326999.1 1404562 R 366394 CDS YP_001327000.1 150396533 5322163 complement(1407085..1409193) 1 NC_009636.1 KEGG: mlo:mlr8544 hypothetical protein; hypothetical protein 1409193 5322163 Smed_1315 Sinorhizobium medicae WSM419 hypothetical protein YP_001327000.1 1407085 R 366394 CDS YP_001327001.1 150396534 5322164 complement(1409194..1409514) 1 NC_009636.1 hypothetical protein 1409514 5322164 Smed_1316 Sinorhizobium medicae WSM419 hypothetical protein YP_001327001.1 1409194 R 366394 CDS YP_001327002.1 150396535 5322165 1409663..1410268 1 NC_009636.1 KEGG: mes:Meso_0235 hypothetical protein; hypothetical protein 1410268 5322165 Smed_1317 Sinorhizobium medicae WSM419 hypothetical protein YP_001327002.1 1409663 D 366394 CDS YP_001327003.1 150396536 5322166 complement(1410293..1410730) 1 NC_009636.1 hypothetical protein 1410730 5322166 Smed_1318 Sinorhizobium medicae WSM419 hypothetical protein YP_001327003.1 1410293 R 366394 CDS YP_001327004.1 150396537 5322167 complement(1410720..1410899) 1 NC_009636.1 hypothetical protein 1410899 5322167 Smed_1319 Sinorhizobium medicae WSM419 hypothetical protein YP_001327004.1 1410720 R 366394 CDS YP_001327005.1 150396538 5322168 complement(1410909..1411613) 1 NC_009636.1 KEGG: pde:Pden_1001 hypothetical protein; hypothetical protein 1411613 5322168 Smed_1320 Sinorhizobium medicae WSM419 hypothetical protein YP_001327005.1 1410909 R 366394 CDS YP_001327006.1 150396539 5322169 complement(1411610..1413892) 1 NC_009636.1 TIGRFAM: phage tape measure protein; KEGG: pde:Pden_3596 phage tape measure protein; phage tape measure protein 1413892 5322169 Smed_1321 Sinorhizobium medicae WSM419 phage tape measure protein YP_001327006.1 1411610 R 366394 CDS YP_001327007.1 150396540 5322170 1413969..1414256 1 NC_009636.1 hypothetical protein 1414256 5322170 Smed_1322 Sinorhizobium medicae WSM419 hypothetical protein YP_001327007.1 1413969 D 366394 CDS YP_001327008.1 150396541 5322171 complement(1414468..1414824) 1 NC_009636.1 KEGG: pde:Pden_0999 hypothetical protein; hypothetical protein 1414824 5322171 Smed_1323 Sinorhizobium medicae WSM419 hypothetical protein YP_001327008.1 1414468 R 366394 CDS YP_001327009.1 150396542 5322172 complement(1414824..1415261) 1 NC_009636.1 KEGG: pde:Pden_0998 hypothetical protein; hypothetical protein 1415261 5322172 Smed_1324 Sinorhizobium medicae WSM419 hypothetical protein YP_001327009.1 1414824 R 366394 CDS YP_001327010.1 150396543 5322173 complement(1415302..1415718) 1 NC_009636.1 KEGG: pde:Pden_0996 gene transfer agent; hypothetical protein 1415718 5322173 Smed_1325 Sinorhizobium medicae WSM419 hypothetical protein YP_001327010.1 1415302 R 366394 CDS YP_001327011.1 150396544 5322174 complement(1415718..1416200) 1 NC_009636.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: pde:Pden_0997 phage protein, HK97 GP10 family; HK97 family phage protein 1416200 5322174 Smed_1326 Sinorhizobium medicae WSM419 HK97 family phage protein YP_001327011.1 1415718 R 366394 CDS YP_001327012.1 150396545 5322175 complement(1416197..1416547) 1 NC_009636.1 TIGRFAM: phage head-tail adaptor, putative; phage head-tail adaptor 1416547 5322175 Smed_1327 Sinorhizobium medicae WSM419 phage head-tail adaptor YP_001327012.1 1416197 R 366394 CDS YP_001327013.1 150396546 5322176 complement(1416698..1417108) 1 NC_009636.1 KEGG: nha:Nham_1715 hypothetical protein; hypothetical protein 1417108 5322176 Smed_1328 Sinorhizobium medicae WSM419 hypothetical protein YP_001327013.1 1416698 R 366394 CDS YP_001327014.1 150396547 5322177 complement(1417110..1417403) 1 NC_009636.1 KEGG: mav:MAV_0791 hypothetical protein; hypothetical protein 1417403 5322177 Smed_1329 Sinorhizobium medicae WSM419 hypothetical protein YP_001327014.1 1417110 R 366394 CDS YP_001327015.1 150396548 5322178 complement(1417413..1418750) 1 NC_009636.1 KEGG: sce:YOL155C ORF; hypothetical protein 1418750 5322178 Smed_1330 Sinorhizobium medicae WSM419 hypothetical protein YP_001327015.1 1417413 R 366394 CDS YP_001327016.1 150396549 5322179 complement(1418754..1419116) 1 NC_009636.1 KEGG: mlo:mll0461 hypothetical protein; hypothetical protein 1419116 5322179 Smed_1331 Sinorhizobium medicae WSM419 hypothetical protein YP_001327016.1 1418754 R 366394 CDS YP_001327017.1 150396550 5322180 complement(1419135..1419707) 1 NC_009636.1 KEGG: sit:TM1040_1619 phage conserved hypothetical protein, phiE125 gp8; hypothetical protein 1419707 5322180 Smed_1332 Sinorhizobium medicae WSM419 hypothetical protein YP_001327017.1 1419135 R 366394 CDS YP_001327018.1 150396551 5322181 complement(1419923..1420312) 1 NC_009636.1 KEGG: nha:Nham_2488 hypothetical protein; hypothetical protein 1420312 5322181 Smed_1333 Sinorhizobium medicae WSM419 hypothetical protein YP_001327018.1 1419923 R 366394 CDS YP_001327019.1 150396552 5322182 complement(1420375..1421649) 1 NC_009636.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein HK97; KEGG: mes:Meso_1895 phage major capsid protein, HK97 family; HK97 family phage major capsid protein 1421649 5322182 Smed_1334 Sinorhizobium medicae WSM419 HK97 family phage major capsid protein YP_001327019.1 1420375 R 366394 CDS YP_001327020.1 150396553 5322183 complement(1421695..1422426) 1 NC_009636.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: dvl:Dvul_0868 phage prohead protease, HK97 family; HK97 family phage prohead protease 1422426 5322183 Smed_1335 Sinorhizobium medicae WSM419 HK97 family phage prohead protease YP_001327020.1 1421695 R 366394 CDS YP_001327021.1 150396554 5322184 complement(1422413..1423666) 1 NC_009636.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: dvl:Dvul_0869 phage portal protein, HK97 family; HK97 family phage portal protein 1423666 5322184 Smed_1336 Sinorhizobium medicae WSM419 HK97 family phage portal protein YP_001327021.1 1422413 R 366394 CDS YP_001327022.1 150396555 5322185 complement(1423684..1425159) 1 NC_009636.1 PFAM: phage Terminase; KEGG: bpm:BURPS1710b_1642 phage terminase, large subunit, putative; phage terminase 1425159 5322185 Smed_1337 Sinorhizobium medicae WSM419 phage terminase YP_001327022.1 1423684 R 366394 CDS YP_001327023.1 150396556 5322186 complement(1425279..1425749) 1 NC_009636.1 TIGRFAM: phage terminase, small subunit, putative, P27 family; KEGG: bpm:BURPS1710b_1678 phage terminase, small subunit, putative, P27 family; P27 family phage terminase small subunit 1425749 5322186 Smed_1338 Sinorhizobium medicae WSM419 P27 family phage terminase small subunit YP_001327023.1 1425279 R 366394 CDS YP_001327024.1 150396557 5322187 complement(1425862..1426203) 1 NC_009636.1 KEGG: cth:Cthe_1731 HNH endonuclease; hypothetical protein 1426203 5322187 Smed_1339 Sinorhizobium medicae WSM419 hypothetical protein YP_001327024.1 1425862 R 366394 CDS YP_001327025.1 150396558 5322188 1426220..1426402 1 NC_009636.1 KEGG: sme:SMa1361 hypothetical protein; hypothetical protein 1426402 5322188 Smed_1340 Sinorhizobium medicae WSM419 hypothetical protein YP_001327025.1 1426220 D 366394 CDS YP_001327026.1 150396559 5322189 1426425..1426658 1 NC_009636.1 hypothetical protein 1426658 5322189 Smed_1341 Sinorhizobium medicae WSM419 hypothetical protein YP_001327026.1 1426425 D 366394 CDS YP_001327027.1 150396560 5322190 complement(1426890..1428050) 1 NC_009636.1 hypothetical protein 1428050 5322190 Smed_1342 Sinorhizobium medicae WSM419 hypothetical protein YP_001327027.1 1426890 R 366394 CDS YP_001327028.1 150396561 5322191 complement(1428051..1428452) 1 NC_009636.1 hypothetical protein 1428452 5322191 Smed_1343 Sinorhizobium medicae WSM419 hypothetical protein YP_001327028.1 1428051 R 366394 CDS YP_001327029.1 150396562 5322192 complement(1428449..1428763) 1 NC_009636.1 hypothetical protein 1428763 5322192 Smed_1344 Sinorhizobium medicae WSM419 hypothetical protein YP_001327029.1 1428449 R 366394 CDS YP_001327030.1 150396563 5322193 complement(1428775..1428954) 1 NC_009636.1 hypothetical protein 1428954 5322193 Smed_1345 Sinorhizobium medicae WSM419 hypothetical protein YP_001327030.1 1428775 R 366394 CDS YP_001327031.1 150396564 5322194 complement(1429222..1431603) 1 NC_009636.1 KEGG: mag:amb0358 hypothetical protein; hypothetical protein 1431603 5322194 Smed_1346 Sinorhizobium medicae WSM419 hypothetical protein YP_001327031.1 1429222 R 366394 CDS YP_001327032.1 150396565 5322195 complement(1431835..1432020) 1 NC_009636.1 hypothetical protein 1432020 5322195 Smed_1347 Sinorhizobium medicae WSM419 hypothetical protein YP_001327032.1 1431835 R 366394 CDS YP_001327033.1 150396566 5322196 complement(1432667..1433842) 1 NC_009636.1 PFAM: phage integrase family protein; KEGG: atc:AGR_L_2007 hypothetical protein; phage integrase family protein 1433842 5322196 Smed_1348 Sinorhizobium medicae WSM419 phage integrase family protein YP_001327033.1 1432667 R 366394 CDS YP_001327034.1 150396567 5322199 1434625..1434909 1 NC_009636.1 KEGG: hch:HCH_03235 hypothetical protein; hypothetical protein 1434909 5322199 Smed_1351 Sinorhizobium medicae WSM419 hypothetical protein YP_001327034.1 1434625 D 366394 CDS YP_001327035.1 150396568 5322201 1435313..1435477 1 NC_009636.1 KEGG: sme:SMc01239 hypothetical/unknown transmembrane protein; hypothetical protein 1435477 5322201 Smed_1352 Sinorhizobium medicae WSM419 hypothetical protein YP_001327035.1 1435313 D 366394 CDS YP_001327036.1 150396569 5322202 1435710..1436426 1 NC_009636.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1436426 5322202 Smed_1353 Sinorhizobium medicae WSM419 LexA repressor YP_001327036.1 1435710 D 366394 CDS YP_001327037.1 150396570 5322204 complement(1436794..1437873) 1 NC_009636.1 KEGG: sme:SMc01182 hypothetical protein; hypothetical protein 1437873 5322204 Smed_1354 Sinorhizobium medicae WSM419 hypothetical protein YP_001327037.1 1436794 R 366394 CDS YP_001327038.1 150396571 5322205 1438134..1438487 1 NC_009636.1 KEGG: sme:SMc01181 putative transmembrane protein; putative transmembrane protein 1438487 5322205 Smed_1355 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327038.1 1438134 D 366394 CDS YP_001327039.1 150396572 5322206 complement(1438523..1438843) 1 NC_009636.1 KEGG: sme:SMc01180 hypothetical protein; hypothetical protein 1438843 5322206 Smed_1356 Sinorhizobium medicae WSM419 hypothetical protein YP_001327039.1 1438523 R 366394 CDS YP_001327040.1 150396573 5322208 complement(1439107..1439457) 1 NC_009636.1 hypothetical protein 1439457 5322208 Smed_1357 Sinorhizobium medicae WSM419 hypothetical protein YP_001327040.1 1439107 R 366394 CDS YP_001327041.1 150396574 5322209 1439512..1441575 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: aba:Acid345_3957 beta-lactamase-like; beta-lactamase domain-containing protein 1441575 5322209 Smed_1358 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001327041.1 1439512 D 366394 CDS YP_001327042.1 150396575 5322210 complement(1441636..1442199) 1 NC_009636.1 KEGG: sme:SMb20921 hypothetical protein; hypothetical protein 1442199 5322210 Smed_1359 Sinorhizobium medicae WSM419 hypothetical protein YP_001327042.1 1441636 R 366394 CDS YP_001327043.1 150396576 5322211 1442494..1442838 1 NC_009636.1 PFAM: small multidrug resistance protein; KEGG: sme:SMc01179 putative multidrug transmembrane resistance signal peptide protein; small multidrug resistance protein 1442838 5322211 Smed_1360 Sinorhizobium medicae WSM419 small multidrug resistance protein YP_001327043.1 1442494 D 366394 CDS YP_001327044.1 150396577 5322212 1442835..1443161 1 NC_009636.1 PFAM: small multidrug resistance protein; KEGG: sme:SMc01178 putative multidrug transmembrane resistance signal peptide protein; small multidrug resistance protein 1443161 5322212 Smed_1361 Sinorhizobium medicae WSM419 small multidrug resistance protein YP_001327044.1 1442835 D 366394 CDS YP_001327045.1 150396578 5322213 complement(1443149..1443997) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc01175 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1443997 5322213 Smed_1362 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327045.1 1443149 R 366394 CDS YP_001327046.1 150396579 5322214 1444310..1445350 1 NC_009636.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 1445350 5322214 Smed_1363 Sinorhizobium medicae WSM419 cysteine synthase A YP_001327046.1 1444310 D 366394 CDS YP_001327047.1 150396580 5322215 1445358..1446107 1 NC_009636.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: sme:SMc01173 hypothetical protein; threonyl/alanyl tRNA synthetase SAD 1446107 5322215 Smed_1364 Sinorhizobium medicae WSM419 threonyl/alanyl tRNA synthetase SAD YP_001327047.1 1445358 D 366394 CDS YP_001327048.1 150396581 5322216 1446142..1447005 1 NC_009636.1 PFAM: Rhodanese domain protein; KEGG: sme:SMc01172 putative thiosulfate sulfurtransferase protein; rhodanese domain-containing protein 1447005 5322216 Smed_1365 Sinorhizobium medicae WSM419 rhodanese domain-containing protein YP_001327048.1 1446142 D 366394 CDS YP_001327049.1 150396582 5322217 1447011..1447574 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01171 hypothetical protein; N-acetyltransferase GCN5 1447574 5322217 Smed_1366 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327049.1 1447011 D 366394 CDS YP_001327050.1 150396583 5322218 1447689..1448156 1 NC_009636.1 PFAM: protein of unknown function DUF1203; KEGG: sme:SMc01170 hypothetical protein; hypothetical protein 1448156 5322218 Smed_1367 Sinorhizobium medicae WSM419 hypothetical protein YP_001327050.1 1447689 D 366394 CDS YP_001327051.1 150396584 5322219 complement(1448206..1449324) 1 NC_009636.1 TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: sme:SMc01169 probable alanine dehydrogenase oxidoreductase protein; alanine dehydrogenase 1449324 5322219 Smed_1368 Sinorhizobium medicae WSM419 alanine dehydrogenase YP_001327051.1 1448206 R 366394 CDS YP_001327052.1 150396585 5322220 1449480..1449941 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc01168 putative transcription regulator protein; AsnC family transcriptional regulator 1449941 5322220 Smed_1369 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001327052.1 1449480 D 366394 CDS YP_001327053.1 150396586 5322222 complement(1452142..1452462) 1 NC_009636.1 KEGG: sme:SMc00935 hypothetical protein; hypothetical protein 1452462 5322222 Smed_1372 Sinorhizobium medicae WSM419 hypothetical protein YP_001327053.1 1452142 R 366394 CDS YP_001327054.1 150396587 5322223 complement(1452527..1453774) 1 NC_009636.1 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 1453774 5322223 Smed_1373 Sinorhizobium medicae WSM419 threonine dehydratase YP_001327054.1 1452527 R 366394 CDS YP_001327055.1 150396588 5322224 1453934..1455388 1 NC_009636.1 PFAM: cation transporter; KEGG: sme:SMc00937 probable TRK system potassium uptake transmembrane protein; cation transporter 1455388 5322224 Smed_1374 Sinorhizobium medicae WSM419 cation transporter YP_001327055.1 1453934 D 366394 CDS YP_001327056.1 150396589 5322225 1455468..1456058 1 NC_009636.1 KEGG: sme:SMc00938 hypothetical/unknown protein; hypothetical protein 1456058 5322225 Smed_1375 Sinorhizobium medicae WSM419 hypothetical protein YP_001327056.1 1455468 D 366394 CDS YP_001327057.1 150396590 5322227 complement(1456374..1456568) 1 NC_009636.1 hypothetical protein 1456568 5322227 Smed_1376 Sinorhizobium medicae WSM419 hypothetical protein YP_001327057.1 1456374 R 366394 CDS YP_001327058.1 150396591 5322228 1456913..1457131 1 NC_009636.1 KEGG: sme:SMc01789 hypothetical signal peptide protein; putative signal peptide protein 1457131 5322228 Smed_1377 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327058.1 1456913 D 366394 CDS YP_001327059.1 150396592 5322229 1457247..1457486 1 NC_009636.1 hypothetical protein 1457486 5322229 Smed_1378 Sinorhizobium medicae WSM419 hypothetical protein YP_001327059.1 1457247 D 366394 CDS YP_001327060.1 150396593 5322230 complement(1457567..1457956) 1 NC_009636.1 PFAM: DGPFAETKE family protein; KEGG: sme:SMc00939 hypothetical protein; DGPFAETKE family protein 1457956 5322230 Smed_1379 Sinorhizobium medicae WSM419 DGPFAETKE family protein YP_001327060.1 1457567 R 366394 CDS YP_001327061.1 150396594 5322231 complement(1458118..1458405) 1 NC_009636.1 KEGG: sme:SMc00940 hypothetical protein; hypothetical protein 1458405 5322231 Smed_1380 Sinorhizobium medicae WSM419 hypothetical protein YP_001327061.1 1458118 R 366394 CDS YP_001327062.1 150396595 5322232 1458533..1458790 1 NC_009636.1 hypothetical protein 1458790 5322232 Smed_1381 Sinorhizobium medicae WSM419 hypothetical protein YP_001327062.1 1458533 D 366394 CDS YP_001327063.1 150396596 5322233 complement(1458843..1459061) 1 NC_009636.1 KEGG: sme:SMc00941 hypothetical/unknown protein; hypothetical protein 1459061 5322233 Smed_1382 Sinorhizobium medicae WSM419 hypothetical protein YP_001327063.1 1458843 R 366394 CDS YP_001327064.1 150396597 5322234 complement(1459146..1459388) 1 NC_009636.1 KEGG: sme:SMc00942 hypothetical protein; hypothetical protein 1459388 5322234 Smed_1383 Sinorhizobium medicae WSM419 hypothetical protein YP_001327064.1 1459146 R 366394 CDS YP_001327065.1 150396598 5322235 complement(1459704..1460306) 1 NC_009636.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1460306 5322235 Smed_1384 Sinorhizobium medicae WSM419 TrpR binding protein WrbA YP_001327065.1 1459704 R 366394 CDS YP_001327066.1 150396599 5322236 1460469..1461230 1 NC_009636.1 PFAM: molybdopterin binding domain; KEGG: sme:SMc00944 hypothetical protein; molybdopterin binding domain-containing protein 1461230 5322236 Smed_1385 Sinorhizobium medicae WSM419 molybdopterin binding domain-containing protein YP_001327066.1 1460469 D 366394 CDS YP_001327067.1 150396600 5322237 1461420..1461917 1 NC_009636.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 1461917 5322237 Smed_1386 Sinorhizobium medicae WSM419 xanthine-guanine phosphoribosyltransferase YP_001327067.1 1461420 D 366394 CDS YP_001327068.1 150396601 5322238 complement(1461949..1463421) 1 NC_009636.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: sme:SMc00946 hypothetical protein; carbohydrate kinase 1463421 5322238 Smed_1387 Sinorhizobium medicae WSM419 carbohydrate kinase YP_001327068.1 1461949 R 366394 CDS YP_001327069.1 150396602 5322239 1463770..1464108 1 NC_009636.1 PFAM: nitrogen regulatory protein P-II; KEGG: atc:AGR_C_3252 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1464108 5322239 Smed_1388 Sinorhizobium medicae WSM419 nitrogen regulatory protein P-II YP_001327069.1 1463770 D 366394 CDS YP_001327070.1 150396603 5322240 1464190..1465599 1 NC_009636.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sme:SMc00948 glutamine synthetase I protein; glutamine synthetase 1465599 5322240 Smed_1389 Sinorhizobium medicae WSM419 glutamine synthetase YP_001327070.1 1464190 D 366394 CDS YP_001327071.1 150396604 5322241 1465780..1466109 1 NC_009636.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: sme:SMc00949 hypothetical protein; hemimethylated DNA binding protein 1466109 5322241 Smed_1390 Sinorhizobium medicae WSM419 hemimethylated DNA binding protein YP_001327071.1 1465780 D 366394 CDS YP_001327072.1 150396605 5322242 complement(1466267..1467046) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH02680 probable ferrichrome ABC transporter, ATP-binding protein; ABC transporter-like protein 1467046 5322242 Smed_1391 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327072.1 1466267 R 366394 CDS YP_001327073.1 150396606 5322243 complement(1467056..1468087) 1 NC_009636.1 PFAM: transport system permease protein; KEGG: ret:RHE_CH02681 probable ferrichrome ABC transporter, permease protein; transport system permease 1468087 5322243 Smed_1392 Sinorhizobium medicae WSM419 transport system permease YP_001327073.1 1467056 R 366394 CDS YP_001327074.1 150396607 5322244 complement(1468087..1469094) 1 NC_009636.1 PFAM: transport system permease protein; KEGG: ret:RHE_CH02682 probable ferrichrome ABC transporter, permease protein; transport system permease 1469094 5322244 Smed_1393 Sinorhizobium medicae WSM419 transport system permease YP_001327074.1 1468087 R 366394 CDS YP_001327075.1 150396608 5322245 complement(1469115..1470113) 1 NC_009636.1 PFAM: periplasmic binding protein; KEGG: ret:RHE_CH02683 probable ferrichrome ABC transporter, substrate-binding protein; periplasmic binding protein 1470113 5322245 Smed_1394 Sinorhizobium medicae WSM419 periplasmic binding protein YP_001327075.1 1469115 R 366394 CDS YP_001327076.1 150396609 5322246 1470631..1471521 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_PB00016 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator 1471521 5322246 Smed_1395 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327076.1 1470631 D 366394 CDS YP_001327077.1 150396610 5322247 complement(1471600..1472229) 1 NC_009636.1 PFAM: Invasion associated locus B family protein; KEGG: sme:SMc00950 putative signal peptide protein; invasion associated locus B family protein 1472229 5322247 Smed_1396 Sinorhizobium medicae WSM419 invasion associated locus B family protein YP_001327077.1 1471600 R 366394 CDS YP_001327078.1 150396611 5322248 1472542..1474362 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc00951 hypothetical transmembrane protein; extracellular solute-binding protein 1474362 5322248 Smed_1397 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327078.1 1472542 D 366394 CDS YP_001327079.1 150396612 5322249 1474445..1475110 1 NC_009636.1 PFAM: DSBA oxidoreductase; KEGG: sme:SMc00952 hypothetical protein; DSBA oxidoreductase 1475110 5322249 Smed_1398 Sinorhizobium medicae WSM419 DSBA oxidoreductase YP_001327079.1 1474445 D 366394 CDS YP_001327080.1 150396613 5322250 complement(1475152..1478667) 1 NC_009636.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc04450 probable transcription-repair coupling factor (TRCF) protein; transcription-repair coupling factor 1478667 5322250 Smed_1399 Sinorhizobium medicae WSM419 transcription-repair coupling factor YP_001327080.1 1475152 R 366394 CDS YP_001327081.1 150396614 5322251 complement(1478664..1478975) 1 NC_009636.1 PFAM: protein of unknown function DUF339; KEGG: sme:SMc00227 hypothetical protein; hypothetical protein 1478975 5322251 Smed_1400 Sinorhizobium medicae WSM419 hypothetical protein YP_001327081.1 1478664 R 366394 CDS YP_001327082.1 150396615 5322252 1479092..1481197 1 NC_009636.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1481197 5322252 Smed_1401 Sinorhizobium medicae WSM419 ATP-dependent DNA helicase RecG YP_001327082.1 1479092 D 366394 CDS YP_001327083.1 150396616 5322253 complement(1481214..1481906) 1 NC_009636.1 PFAM: protein of unknown function DUF502; KEGG: sme:SMc00229 hypothetical protein; hypothetical protein 1481906 5322253 Smed_1402 Sinorhizobium medicae WSM419 hypothetical protein YP_001327083.1 1481214 R 366394 CDS YP_001327084.1 150396617 5322254 complement(1481925..1482422) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00230 putative acetyltransferase; N-acetyltransferase GCN5 1482422 5322254 Smed_1403 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327084.1 1481925 R 366394 CDS YP_001327085.1 150396618 5322255 complement(1482419..1484245) 1 NC_009636.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1484245 5322255 Smed_1404 Sinorhizobium medicae WSM419 glucosamine--fructose-6-phosphate aminotransferase YP_001327085.1 1482419 R 366394 CDS YP_001327086.1 150396619 5322256 complement(1484423..1485793) 1 NC_009636.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1485793 glmU 5322256 glmU Sinorhizobium medicae WSM419 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001327086.1 1484423 R 366394 CDS YP_001327087.1 150396620 5322257 complement(1485961..1487607) 1 NC_009636.1 TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; PFAM: Na+cotransporter; KEGG: sme:SMc00233 putative phosphate:Na+ symporter, PNaS family; sodium-dependent inorganic phosphate (Pi) transporter 1487607 5322257 Smed_1406 Sinorhizobium medicae WSM419 sodium-dependent inorganic phosphate (Pi) transporter YP_001327087.1 1485961 R 366394 CDS YP_001327088.1 150396621 5322258 1487958..1489850 1 NC_009636.1 KEGG: sme:SMc00234 putative peptidyl-prolyl CIS-trans isomerase protein; putative peptidyl-prolyl cis-trans isomerase 1489850 5322258 Smed_1407 Sinorhizobium medicae WSM419 putative peptidyl-prolyl cis-trans isomerase YP_001327088.1 1487958 D 366394 CDS YP_001327089.1 150396622 5322259 1489869..1490882 1 NC_009636.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1490882 trpD 5322259 trpD Sinorhizobium medicae WSM419 anthranilate phosphoribosyltransferase YP_001327089.1 1489869 D 366394 CDS YP_001327090.1 150396623 5322260 1490892..1491707 1 NC_009636.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase 1491707 trpC 5322260 trpC Sinorhizobium medicae WSM419 Indole-3-glycerol phosphate synthase YP_001327090.1 1490892 D 366394 CDS YP_001327091.1 150396624 5322261 1491707..1492201 1 NC_009636.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1492201 moaC 5322261 moaC Sinorhizobium medicae WSM419 molybdenum cofactor biosynthesis protein MoaC YP_001327091.1 1491707 D 366394 CDS YP_001327092.1 150396625 5322262 1492201..1493421 1 NC_009636.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sme:SMc00238 probable molybdopterin biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 1493421 5322262 Smed_1411 Sinorhizobium medicae WSM419 molybdenum cofactor synthesis domain-containing protein YP_001327092.1 1492201 D 366394 CDS YP_001327093.1 150396626 5322263 complement(1493423..1494004) 1 NC_009636.1 KEGG: sme:SMc00239 hypothetical protein; hypothetical protein 1494004 5322263 Smed_1412 Sinorhizobium medicae WSM419 hypothetical protein YP_001327093.1 1493423 R 366394 CDS YP_001327094.1 150396627 5322264 complement(1494057..1495349) 1 NC_009636.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: sme:SMc00240 hypothetical transmembrane protein; hypothetical protein 1495349 5322264 Smed_1413 Sinorhizobium medicae WSM419 hypothetical protein YP_001327094.1 1494057 R 366394 CDS YP_001327095.1 150396628 5322265 complement(1495463..1496215) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc00241 putative transcription regulator protein; GntR family transcriptional regulator 1496215 5322265 Smed_1414 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001327095.1 1495463 R 366394 CDS YP_001327096.1 150396629 5322266 complement(1496470..1497540) 1 NC_009636.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMc00242 hypothetical signal peptide protein; basic membrane lipoprotein 1497540 5322266 Smed_1415 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001327096.1 1496470 R 366394 CDS YP_001327097.1 150396630 5322267 complement(1497581..1498501) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc00244 putative transport system permease ABC transporter protein; inner-membrane translocator 1498501 5322267 Smed_1416 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001327097.1 1497581 R 366394 CDS YP_001327098.1 150396631 5322268 complement(1498501..1499595) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc00243 putative transport system permease ABC transporter protein; inner-membrane translocator 1499595 5322268 Smed_1417 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001327098.1 1498501 R 366394 CDS YP_001327099.1 150396632 5322269 complement(1499585..1501219) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00245 putative ABC transporter ATP-binding protein; ABC transporter-like protein 1501219 5322269 Smed_1418 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327099.1 1499585 R 366394 CDS YP_001327100.1 150396633 5322270 complement(1501266..1502243) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc00246 probable quinone oxidoreductase protein; alcohol dehydrogenase 1502243 5322270 Smed_1419 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001327100.1 1501266 R 366394 CDS YP_001327101.1 150396634 5322271 complement(1502278..1503003) 1 NC_009636.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sme:SMc00247 phosphatidylcholine synthase; phosphatidylcholine synthase 1503003 5322271 Smed_1420 Sinorhizobium medicae WSM419 phosphatidylcholine synthase YP_001327101.1 1502278 R 366394 CDS YP_001327102.1 150396635 5322272 1503409..1504620 1 NC_009636.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: sme:SMc00316 2-octaprenyl-6-methoxyphenyl hydroxylase; 2-octaprenyl-6-methoxyphenyl hydroxylase 1504620 5322272 Smed_1421 Sinorhizobium medicae WSM419 2-octaprenyl-6-methoxyphenyl hydroxylase YP_001327102.1 1503409 D 366394 CDS YP_001327103.1 150396636 5322273 complement(1504588..1505550) 1 NC_009636.1 PFAM: Auxin Efflux Carrier; KEGG: sme:SMc00317 hypothetical transmembrane protein; auxin efflux carrier 1505550 5322273 Smed_1422 Sinorhizobium medicae WSM419 auxin efflux carrier YP_001327103.1 1504588 R 366394 CDS YP_001327104.1 150396637 5322274 complement(1505580..1506323) 1 NC_009636.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sme:SMc00248 putative cytochrome C-type biogenesis protein; cytochrome c biogenesis transmembrane protein 1506323 5322274 Smed_1423 Sinorhizobium medicae WSM419 cytochrome c biogenesis transmembrane protein YP_001327104.1 1505580 R 366394 CDS YP_001327105.1 150396638 5322276 1506918..1507964 1 NC_009636.1 TIGRFAM: methyltransferase FkbM family; KEGG: rpd:RPD_2545 methyltransferase FkbM; FkbM family methyltransferase 1507964 5322276 Smed_1424 Sinorhizobium medicae WSM419 FkbM family methyltransferase YP_001327105.1 1506918 D 366394 CDS YP_001327106.1 150396639 5322277 1507976..1508239 1 NC_009636.1 KEGG: sme:SMc00251 hypothetical protein; hypothetical protein 1508239 5322277 Smed_1425 Sinorhizobium medicae WSM419 hypothetical protein YP_001327106.1 1507976 D 366394 CDS YP_001327107.1 150396640 5322278 1508358..1509242 1 NC_009636.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: sme:SMb21406 hypothetical protein; Ku family containing protein 1509242 5322278 Smed_1426 Sinorhizobium medicae WSM419 Ku family containing protein YP_001327107.1 1508358 D 366394 CDS YP_001327108.1 150396641 5322279 1509255..1510070 1 NC_009636.1 TIGRFAM: Ku family containing protein; PFAM: Ku domain protein; KEGG: sme:SMb21407 hypothetical protein; Ku family containing protein 1510070 5322279 Smed_1427 Sinorhizobium medicae WSM419 Ku family containing protein YP_001327108.1 1509255 D 366394 CDS YP_001327109.1 150396642 5322280 1510331..1511188 1 NC_009636.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0876 methyltransferase type 11; type 12 methyltransferase 1511188 5322280 Smed_1428 Sinorhizobium medicae WSM419 type 12 methyltransferase YP_001327109.1 1510331 D 366394 CDS YP_001327110.1 150396643 5322281 complement(1511280..1511579) 1 NC_009636.1 KEGG: sme:SMc00252 hypothetical signal peptide protein; putative signal peptide protein 1511579 5322281 Smed_1429 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327110.1 1511280 R 366394 CDS YP_001327111.1 150396644 5322282 1511807..1512208 1 NC_009636.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMc00253 hypothetical signal peptide protein; hypothetical protein 1512208 5322282 Smed_1430 Sinorhizobium medicae WSM419 hypothetical protein YP_001327111.1 1511807 D 366394 CDS YP_001327112.1 150396645 5322283 1513078..1513485 1 NC_009636.1 PFAM: protein of unknown function DUF1236; KEGG: sme:SMc00254 hypothetical protein; hypothetical protein 1513485 5322283 Smed_1431 Sinorhizobium medicae WSM419 hypothetical protein YP_001327112.1 1513078 D 366394 CDS YP_001327113.1 150396646 5322284 1513720..1514034 1 NC_009636.1 KEGG: sme:SMc00255 hypothetical protein; hypothetical protein 1514034 5322284 Smed_1432 Sinorhizobium medicae WSM419 hypothetical protein YP_001327113.1 1513720 D 366394 CDS YP_001327114.1 150396647 5322285 complement(1514091..1515116) 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc00256 putative transcription regulator protein; AraC family transcriptional regulator 1515116 5322285 Smed_1433 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001327114.1 1514091 R 366394 CDS YP_001327115.1 150396648 5322286 1515373..1516020 1 NC_009636.1 PFAM: porin; KEGG: sme:SMc00257 probable outer-membrane protein; porin 1516020 5322286 Smed_1434 Sinorhizobium medicae WSM419 porin YP_001327115.1 1515373 D 366394 CDS YP_001327116.1 150396649 5322287 1516243..1516506 1 NC_009636.1 KEGG: sme:SMc00258 hypothetical signal peptide protein; putative signal peptide protein 1516506 5322287 Smed_1435 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327116.1 1516243 D 366394 CDS YP_001327117.1 150396650 5322288 complement(1516552..1517406) 1 NC_009636.1 KEGG: sme:SMc00259 hypothetical protein; hypothetical protein 1517406 5322288 Smed_1436 Sinorhizobium medicae WSM419 hypothetical protein YP_001327117.1 1516552 R 366394 CDS YP_001327118.1 150396651 5322289 complement(1517409..1518161) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00260 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1518161 5322289 Smed_1437 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327118.1 1517409 R 366394 CDS YP_001327119.1 150396652 5322290 complement(1518158..1519807) 1 NC_009636.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 1519807 5322290 Smed_1438 Sinorhizobium medicae WSM419 acyl-CoA synthetase YP_001327119.1 1518158 R 366394 CDS YP_001327120.1 150396653 5322291 complement(1519804..1520973) 1 NC_009636.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1520973 5322291 Smed_1439 Sinorhizobium medicae WSM419 acetyl-CoA acetyltransferase YP_001327120.1 1519804 R 366394 CDS YP_001327121.1 150396654 5322292 complement(1520970..1521818) 1 NC_009636.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMc00263 putative transcription regulator protein; regulatory protein IclR 1521818 5322292 Smed_1440 Sinorhizobium medicae WSM419 regulatory protein IclR YP_001327121.1 1520970 R 366394 CDS YP_001327122.1 150396655 5322293 complement(1521822..1522625) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc00264 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1522625 5322293 Smed_1441 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327122.1 1521822 R 366394 CDS YP_001327123.1 150396656 5322294 complement(1522726..1523736) 1 NC_009636.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMc00265 putative periplasmic binding protein; TRAP dicarboxylate transporter subunit DctP 1523736 5322294 Smed_1442 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001327123.1 1522726 R 366394 CDS YP_001327124.1 150396657 5322295 complement(1523785..1525653) 1 NC_009636.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMc00266 putative transmembrane protein; TRAP dicarboxylate transporter subunit DctM 1525653 5322295 Smed_1443 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001327124.1 1523785 R 366394 CDS YP_001327125.1 150396658 5322296 1526132..1526383 1 NC_009636.1 KEGG: sme:SMc00280 hypothetical protein; hypothetical protein 1526383 5322296 Smed_1444 Sinorhizobium medicae WSM419 hypothetical protein YP_001327125.1 1526132 D 366394 CDS YP_001327126.1 150396659 5322297 1527008..1527313 1 NC_009636.1 KEGG: sme:SMc00249 hypothetical protein; hypothetical protein 1527313 5322297 Smed_1445 Sinorhizobium medicae WSM419 hypothetical protein YP_001327126.1 1527008 D 366394 CDS YP_001327127.1 150396660 5322300 complement(1527731..1528036) 1 NC_009636.1 PFAM: ETC complex I subunit conserved region; KEGG: sme:SMc00287 putative oxidoreductase protein; ETC complex I subunit region 1528036 5322300 Smed_1447 Sinorhizobium medicae WSM419 ETC complex I subunit region YP_001327127.1 1527731 R 366394 CDS YP_001327128.1 150396661 5322302 complement(1528260..1528751) 1 NC_009636.1 PFAM: protein of unknown function DUF192; KEGG: sme:SMc00288 hypothetical signal peptide protein; hypothetical protein 1528751 5322302 Smed_1448 Sinorhizobium medicae WSM419 hypothetical protein YP_001327128.1 1528260 R 366394 CDS YP_001327129.1 150396662 5322303 complement(1528751..1529329) 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc00289 putative cold shock transcription regulator protein; cold-shock DNA-binding domain-containing protein 1529329 5322303 Smed_1449 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001327129.1 1528751 R 366394 CDS YP_001327130.1 150396663 5322304 1529526..1529966 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00290 probable lactoylglutathione lyase methylglyoxalase protein; glyoxalase/bleomycin resistance protein/dioxygenase 1529966 5322304 Smed_1450 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001327130.1 1529526 D 366394 CDS YP_001327131.1 150396664 5322305 1530377..1531678 1 NC_009636.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sme:SMc00291 hypothetical lipoprotein; peptidase M15A 1531678 5322305 Smed_1451 Sinorhizobium medicae WSM419 peptidase M15A YP_001327131.1 1530377 D 366394 CDS YP_001327132.1 150396665 5322310 complement(1532678..1534480) 1 NC_009636.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sme:SMc00292 probable single-stranded-DNA-specific exonuclease protein; single-stranded-DNA-specific exonuclease RecJ 1534480 5322310 Smed_1452 Sinorhizobium medicae WSM419 single-stranded-DNA-specific exonuclease RecJ YP_001327132.1 1532678 R 366394 CDS YP_001327133.1 150396666 5322311 complement(1534608..1535930) 1 NC_009636.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1535930 5322311 Smed_1453 Sinorhizobium medicae WSM419 homoserine dehydrogenase YP_001327133.1 1534608 R 366394 CDS YP_001327134.1 150396667 5322312 complement(1536009..1537226) 1 NC_009636.1 PFAM: aminotransferase class I and II; KEGG: sme:SMc00294 probable aminotransferase protein; aminotransferase 1537226 5322312 Smed_1454 Sinorhizobium medicae WSM419 aminotransferase YP_001327134.1 1536009 R 366394 CDS YP_001327135.1 150396668 5322313 complement(1537351..1537656) 1 NC_009636.1 KEGG: sme:SMc00295 hypothetical protein; hypothetical protein 1537656 5322313 Smed_1455 Sinorhizobium medicae WSM419 hypothetical protein YP_001327135.1 1537351 R 366394 CDS YP_001327136.1 150396669 5322314 1537766..1539601 1 NC_009636.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: sme:SMc00296 poly3-hydroxybutyrate polymerase protein; poly(R)-hydroxyalkanoic acid synthase 1539601 5322314 Smed_1456 Sinorhizobium medicae WSM419 poly(R)-hydroxyalkanoic acid synthase YP_001327136.1 1537766 D 366394 CDS YP_001327137.1 150396670 5322315 1539645..1540364 1 NC_009636.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 1540364 5322315 Smed_1457 Sinorhizobium medicae WSM419 sugar fermentation stimulation protein A YP_001327137.1 1539645 D 366394 CDS YP_001327138.1 150396671 5322316 1540394..1541233 1 NC_009636.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1541233 5322316 Smed_1458 Sinorhizobium medicae WSM419 methionine aminopeptidase YP_001327138.1 1540394 D 366394 CDS YP_001327139.1 150396672 5322317 1541230..1542012 1 NC_009636.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1542012 radC 5322317 radC Sinorhizobium medicae WSM419 DNA repair protein RadC YP_001327139.1 1541230 D 366394 CDS YP_001327140.1 150396673 5322318 complement(1542215..1543219) 1 NC_009636.1 PFAM: beta-lactamase; KEGG: sme:SMa1953 putative beta-lactamase; beta-lactamase 1543219 5322318 Smed_1460 Sinorhizobium medicae WSM419 beta-lactamase YP_001327140.1 1542215 R 366394 CDS YP_001327141.1 150396674 5322319 1543281..1544303 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1954 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 1544303 5322319 Smed_1461 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327141.1 1543281 D 366394 CDS YP_001327142.1 150396675 5322320 1544468..1545976 1 NC_009636.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 1545976 5322320 Smed_1462 Sinorhizobium medicae WSM419 soluble pyridine nucleotide transhydrogenase YP_001327142.1 1544468 D 366394 CDS YP_001327143.1 150396676 5322321 complement(1546098..1546490) 1 NC_009636.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; FeS assembly scaffold SufA; PFAM: HesB/YadR/YfhF-family protein; KEGG: sme:SMc00301 hypothetical protein; FeS assembly scaffold SufA 1546490 5322321 Smed_1463 Sinorhizobium medicae WSM419 FeS assembly scaffold SufA YP_001327143.1 1546098 R 366394 CDS YP_001327144.1 150396677 5322322 complement(1546594..1546974) 1 NC_009636.1 TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: sme:SMc00302 hypothetical protein; FeS assembly SUF system protein 1546974 5322322 Smed_1464 Sinorhizobium medicae WSM419 FeS assembly SUF system protein YP_001327144.1 1546594 R 366394 CDS YP_001327145.1 150396678 5322323 complement(1546985..1548226) 1 NC_009636.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sme:SMc00533 putative pyridoxal-phosphate-dependent aminotransferase protein; SufS subfamily cysteine desulfurase 1548226 5322323 Smed_1465 Sinorhizobium medicae WSM419 SufS subfamily cysteine desulfurase YP_001327145.1 1546985 R 366394 CDS YP_001327146.1 150396679 5322324 complement(1548239..1549516) 1 NC_009636.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: sme:SMc00532 hypothetical protein; FeS assembly protein SufD 1549516 5322324 Smed_1466 Sinorhizobium medicae WSM419 FeS assembly protein SufD YP_001327146.1 1548239 R 366394 CDS YP_001327147.1 150396680 5322325 complement(1549539..1550294) 1 NC_009636.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00531 putative ABC transporter ATP-binding protein; FeS assembly ATPase SufC 1550294 5322325 Smed_1467 Sinorhizobium medicae WSM419 FeS assembly ATPase SufC YP_001327147.1 1549539 R 366394 CDS YP_001327148.1 150396681 5322326 complement(1550403..1551872) 1 NC_009636.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1551872 5322326 Smed_1468 Sinorhizobium medicae WSM419 cysteine desulfurase activator complex subunit SufB YP_001327148.1 1550403 R 366394 CDS YP_001327149.1 150396682 5322327 complement(1552027..1553235) 1 NC_009636.1 PFAM: aminotransferase class V; KEGG: sme:SMc00529 putative pyridoxal-phosphate-dependent aminotransferase protein; classV aminotransferase 1553235 5322327 Smed_1469 Sinorhizobium medicae WSM419 classV aminotransferase YP_001327149.1 1552027 R 366394 CDS YP_001327150.1 150396683 5322328 1553414..1554091 1 NC_009636.1 KEGG: sme:SMc00528 hypothetical protein; hypothetical protein 1554091 5322328 Smed_1470 Sinorhizobium medicae WSM419 hypothetical protein YP_001327150.1 1553414 D 366394 CDS YP_001327151.1 150396684 5322329 complement(1554179..1555375) 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sme:SMb20523 hypothetical protein transmembrane; diguanylate cyclase 1555375 5322329 Smed_1471 Sinorhizobium medicae WSM419 diguanylate cyclase YP_001327151.1 1554179 R 366394 CDS YP_001327152.1 150396685 5322330 complement(1555466..1556614) 1 NC_009636.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1556614 anmK 5322330 anmK Sinorhizobium medicae WSM419 anhydro-N-acetylmuramic acid kinase YP_001327152.1 1555466 R 366394 CDS YP_001327153.1 150396686 5322331 1556778..1558031 1 NC_009636.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1558031 5322331 Smed_1473 Sinorhizobium medicae WSM419 tyrosyl-tRNA synthetase YP_001327153.1 1556778 D 366394 CDS YP_001327154.1 150396687 5322332 complement(1558074..1561460) 1 NC_009636.1 KEGG: sme:SMc00525 hypothetical protein; hypothetical protein 1561460 5322332 Smed_1474 Sinorhizobium medicae WSM419 hypothetical protein YP_001327154.1 1558074 R 366394 CDS YP_001327155.1 150396688 5322333 1561879..1562346 1 NC_009636.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMc00524 putative bacterioferritin comigratory protein; alkyl hydroperoxide reductase 1562346 5322333 Smed_1475 Sinorhizobium medicae WSM419 alkyl hydroperoxide reductase YP_001327155.1 1561879 D 366394 CDS YP_001327156.1 150396689 5322334 1562364..1563191 1 NC_009636.1 PFAM: protein of unknown function DUF455; KEGG: ret:RHE_CH02263 hypothetical protein; hypothetical protein 1563191 5322334 Smed_1476 Sinorhizobium medicae WSM419 hypothetical protein YP_001327156.1 1562364 D 366394 CDS YP_001327157.1 150396690 5322335 1563333..1564661 1 NC_009636.1 PFAM: peptidase M23B; KEGG: sme:SMc00539 hypothetical protein; peptidase M23B 1564661 5322335 Smed_1477 Sinorhizobium medicae WSM419 peptidase M23B YP_001327157.1 1563333 D 366394 CDS YP_001327158.1 150396691 5322336 1564858..1566357 1 NC_009636.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc00522 putative ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 1566357 5322336 Smed_1478 Sinorhizobium medicae WSM419 DEAD/DEAH box helicase YP_001327158.1 1564858 D 366394 CDS YP_001327159.1 150396692 5322337 1566368..1566775 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc00521 hypothetical protein; NUDIX hydrolase 1566775 5322337 Smed_1479 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001327159.1 1566368 D 366394 CDS YP_001327160.1 150396693 5322338 complement(1566823..1567140) 1 NC_009636.1 PFAM: TfoX domain protein; KEGG: sme:SMc00520 hypothetical protein; TfoX domain-containing protein 1567140 5322338 Smed_1480 Sinorhizobium medicae WSM419 TfoX domain-containing protein YP_001327160.1 1566823 R 366394 CDS YP_001327161.1 150396694 5322339 complement(1567144..1568760) 1 NC_009636.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: sme:SMc00519 hypothetical protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1568760 5322339 Smed_1481 Sinorhizobium medicae WSM419 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001327161.1 1567144 R 366394 CDS YP_001327162.1 150396695 5322340 complement(1568757..1569464) 1 NC_009636.1 KEGG: sme:SMc00518 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor 1569464 5322340 Smed_1482 Sinorhizobium medicae WSM419 xanthine dehydrogenase accessory factor YP_001327162.1 1568757 R 366394 CDS YP_001327163.1 150396696 5322341 complement(1569468..1569800) 1 NC_009636.1 PFAM: protein of unknown function DUF182; KEGG: sme:SMc00517 hypothetical protein; hypothetical protein 1569800 5322341 Smed_1483 Sinorhizobium medicae WSM419 hypothetical protein YP_001327163.1 1569468 R 366394 CDS YP_001327164.1 150396697 5322342 complement(1569857..1571146) 1 NC_009636.1 PFAM: VWA containing CoxE family protein; KEGG: sme:SMc00516 hypothetical protein; VWA containing CoxE family protein 1571146 5322342 Smed_1484 Sinorhizobium medicae WSM419 VWA containing CoxE family protein YP_001327164.1 1569857 R 366394 CDS YP_001327165.1 150396698 5322343 complement(1571152..1572081) 1 NC_009636.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; KEGG: sme:SMc00515 hypothetical protein; ATPase 1572081 5322343 Smed_1485 Sinorhizobium medicae WSM419 ATPase YP_001327165.1 1571152 R 366394 CDS YP_001327166.1 150396699 5322344 complement(1572105..1572605) 1 NC_009636.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: sme:SMc00514 putative monooxygenase protein; flavin reductase domain-containing protein 1572605 5322344 Smed_1486 Sinorhizobium medicae WSM419 flavin reductase domain-containing protein YP_001327166.1 1572105 R 366394 CDS YP_001327167.1 150396700 5322345 1572796..1573884 1 NC_009636.1 PFAM: Extracellular ligand-binding receptor; KEGG: sme:SMc00513 putative amino acid-binding periplasmic protein; extracellular ligand-binding receptor 1573884 5322345 Smed_1487 Sinorhizobium medicae WSM419 extracellular ligand-binding receptor YP_001327167.1 1572796 D 366394 CDS YP_001327168.1 150396701 5322346 1573881..1574888 1 NC_009636.1 PFAM: peptidase S58 DmpA; KEGG: sme:SMc00512 hypothetical protein; peptidase S58 DmpA 1574888 5322346 Smed_1488 Sinorhizobium medicae WSM419 peptidase S58 DmpA YP_001327168.1 1573881 D 366394 CDS YP_001327169.1 150396702 5322347 1575045..1575725 1 NC_009636.1 PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: sme:SMc00511 probable D-ribulose-5-phosphate 3-epimerase protein; ribulose-phosphate 3-epimerase 1575725 5322347 Smed_1489 Sinorhizobium medicae WSM419 ribulose-phosphate 3-epimerase YP_001327169.1 1575045 D 366394 CDS YP_001327170.1 150396703 5322348 1575722..1576477 1 NC_009636.1 KEGG: sme:SMc00510 hypothetical protein; hypothetical protein 1576477 5322348 Smed_1490 Sinorhizobium medicae WSM419 hypothetical protein YP_001327170.1 1575722 D 366394 CDS YP_001327171.1 150396704 5322349 1576477..1577034 1 NC_009636.1 KEGG: sme:SMc00509 hypothetical protein; hypothetical protein 1577034 5322349 Smed_1491 Sinorhizobium medicae WSM419 hypothetical protein YP_001327171.1 1576477 D 366394 CDS YP_001327172.1 150396705 5322350 1577099..1578406 1 NC_009636.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1578406 5322350 Smed_1492 Sinorhizobium medicae WSM419 adenylosuccinate lyase YP_001327172.1 1577099 D 366394 CDS YP_001327173.1 150396706 5322351 1578537..1578842 1 NC_009636.1 PFAM: type IV pilus assembly PilZ; KEGG: sme:SMc00507 hypothetical/unknown protein; type IV pilus assembly PilZ 1578842 5322351 Smed_1493 Sinorhizobium medicae WSM419 type IV pilus assembly PilZ YP_001327173.1 1578537 D 366394 CDS YP_001327174.1 150396707 5322352 complement(1578912..1579721) 1 NC_009636.1 KEGG: sme:SMc00506 hypothetical protein; hypothetical protein 1579721 5322352 Smed_1494 Sinorhizobium medicae WSM419 hypothetical protein YP_001327174.1 1578912 R 366394 CDS YP_001327175.1 150396708 5322353 1579878..1580438 1 NC_009636.1 PFAM: protein of unknown function DUF1234; KEGG: sme:SMc00505 hypothetical protein; hypothetical protein 1580438 5322353 Smed_1495 Sinorhizobium medicae WSM419 hypothetical protein YP_001327175.1 1579878 D 366394 CDS YP_001327176.1 150396709 5322355 complement(1580692..1581006) 1 NC_009636.1 PFAM: protein of unknown function DUF1476; KEGG: sme:SMc00496 hypothetical protein; hypothetical protein 1581006 5322355 Smed_1497 Sinorhizobium medicae WSM419 hypothetical protein YP_001327176.1 1580692 R 366394 CDS YP_001327177.1 150396710 5322356 1581234..1581998 1 NC_009636.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1581998 5322356 Smed_1498 Sinorhizobium medicae WSM419 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001327177.1 1581234 D 366394 CDS YP_001327178.1 150396711 5322357 1582017..1582259 1 NC_009636.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1582259 5322357 Smed_1499 Sinorhizobium medicae WSM419 phosphoribosylformylglycinamidine synthase subunit PurS YP_001327178.1 1582017 D 366394 CDS YP_001327179.1 150396712 5322358 1582340..1583011 1 NC_009636.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1583011 5322358 Smed_1500 Sinorhizobium medicae WSM419 phosphoribosylformylglycinamidine synthase I YP_001327179.1 1582340 D 366394 CDS YP_001327180.1 150396713 5322359 1583137..1583544 1 NC_009636.1 KEGG: sme:SMc00492 hypothetical protein; hypothetical protein 1583544 5322359 Smed_1501 Sinorhizobium medicae WSM419 hypothetical protein YP_001327180.1 1583137 D 366394 CDS YP_001327181.1 150396714 5322360 complement(1583644..1583886) 1 NC_009636.1 KEGG: sme:SMc00491 hypothetical protein; hypothetical protein 1583886 5322360 Smed_1502 Sinorhizobium medicae WSM419 hypothetical protein YP_001327181.1 1583644 R 366394 CDS YP_001327182.1 150396715 5322361 1583967..1585385 1 NC_009636.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMc00490 putative transcription regulator protein; GntR family transcriptional regulator 1585385 5322361 Smed_1503 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001327182.1 1583967 D 366394 CDS YP_001327183.1 150396716 5322362 1585481..1586068 1 NC_009636.1 KEGG: sme:SMc00489 hypothetical/unknown signal peptide protein; hypothetical protein 1586068 5322362 Smed_1504 Sinorhizobium medicae WSM419 hypothetical protein YP_001327183.1 1585481 D 366394 CDS YP_001327184.1 150396717 5322363 1586239..1588470 1 NC_009636.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1588470 5322363 Smed_1505 Sinorhizobium medicae WSM419 phosphoribosylformylglycinamidine synthase II YP_001327184.1 1586239 D 366394 CDS YP_001327185.1 150396718 5322364 1588595..1588828 1 NC_009636.1 PFAM: BolA family protein; KEGG: sme:SMc00487 hypothetical protein; BolA family protein 1588828 5322364 Smed_1506 Sinorhizobium medicae WSM419 BolA family protein YP_001327185.1 1588595 D 366394 CDS YP_001327186.1 150396719 5322365 1588834..1589076 1 NC_009636.1 KEGG: atc:AGR_C_3399 hypothetical protein; hypothetical protein 1589076 5322365 Smed_1507 Sinorhizobium medicae WSM419 hypothetical protein YP_001327186.1 1588834 D 366394 CDS YP_001327187.1 150396720 5322366 1589239..1589574 1 NC_009636.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sme:SMc00538 monothiol glutaredoxin; glutaredoxin-like protein 1589574 5322366 Smed_1508 Sinorhizobium medicae WSM419 glutaredoxin-like protein YP_001327187.1 1589239 D 366394 CDS YP_001327188.1 150396721 5322367 1589918..1591156 1 NC_009636.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00537 putative transport protein; Bcr/CflA subfamily drug resistance transporter 1591156 5322367 Smed_1509 Sinorhizobium medicae WSM419 Bcr/CflA subfamily drug resistance transporter YP_001327188.1 1589918 D 366394 CDS YP_001327189.1 150396722 5322368 1591199..1592512 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00536 putative transport protein; major facilitator superfamily transporter 1592512 5322368 Smed_1510 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001327189.1 1591199 D 366394 CDS YP_001327190.1 150396723 5322369 complement(1592570..1593394) 1 NC_009636.1 PFAM: inositol monophosphatase; KEGG: sme:SMc00535 hypothetical protein; inositol monophosphatase 1593394 5322369 Smed_1511 Sinorhizobium medicae WSM419 inositol monophosphatase YP_001327190.1 1592570 R 366394 CDS YP_001327191.1 150396724 5322370 complement(1593397..1594278) 1 NC_009636.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1594278 5322370 Smed_1512 Sinorhizobium medicae WSM419 C32 tRNA thiolase YP_001327191.1 1593397 R 366394 CDS YP_001327192.1 150396725 5322371 complement(1594420..1595367) 1 NC_009636.1 catalyzes the formation of glutamate from glutamine; glutaminase 1595367 5322371 Smed_1513 Sinorhizobium medicae WSM419 glutaminase YP_001327192.1 1594420 R 366394 CDS YP_001327193.1 150396726 5322372 complement(1595463..1596080) 1 NC_009636.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1596080 rpsD 5322372 rpsD Sinorhizobium medicae WSM419 30S ribosomal protein S4 YP_001327193.1 1595463 R 366394 CDS YP_001327194.1 150396727 5322373 complement(1596333..1597847) 1 NC_009636.1 SMART: AAA ATPase; KEGG: sme:SMc00484 hypothetical protein; ATPase AAA 1597847 5322373 Smed_1515 Sinorhizobium medicae WSM419 ATPase AAA YP_001327194.1 1596333 R 366394 CDS YP_001327195.1 150396728 5322374 complement(1597976..1598791) 1 NC_009636.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1598791 5322374 Smed_1516 Sinorhizobium medicae WSM419 glutamate racemase YP_001327195.1 1597976 R 366394 CDS YP_001327196.1 150396729 5322375 complement(1598778..1599608) 1 NC_009636.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sme:SMc00482 hypothetical protein; RNA methyltransferase 1599608 5322375 Smed_1517 Sinorhizobium medicae WSM419 RNA methyltransferase YP_001327196.1 1598778 R 366394 CDS YP_001327197.1 150396730 5322376 complement(1599659..1601659) 1 NC_009636.1 KEGG: sme:SMc00481 hypothetical protein; hypothetical protein 1601659 5322376 Smed_1518 Sinorhizobium medicae WSM419 hypothetical protein YP_001327197.1 1599659 R 366394 CDS YP_001327198.1 150396731 5322377 1601963..1603177 1 NC_009636.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1603177 5322377 Smed_1519 Sinorhizobium medicae WSM419 isocitrate dehydrogenase YP_001327198.1 1601963 D 366394 CDS YP_001327199.1 150396732 5322379 complement(1604020..1606683) 1 NC_009636.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1606683 alaS 5322379 alaS Sinorhizobium medicae WSM419 alanyl-tRNA synthetase YP_001327199.1 1604020 R 366394 CDS YP_001327200.1 150396733 5322380 complement(1606902..1607987) 1 NC_009636.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1607987 recA 5322380 recA Sinorhizobium medicae WSM419 recombinase A YP_001327200.1 1606902 R 366394 CDS YP_001327201.1 150396734 5322382 1609421..1610350 1 NC_009636.1 PFAM: Indigoidine synthase A family protein; KEGG: sme:SMc00472 hypothetical protein; indigoidine synthase A family protein 1610350 5322382 Smed_1524 Sinorhizobium medicae WSM419 indigoidine synthase A family protein YP_001327201.1 1609421 D 366394 CDS YP_001327202.1 150396735 5322383 complement(1610442..1613060) 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: sme:SMc00471 putative sensor histidine kinase transmembrane protein; multi-sensor hybrid histidine kinase 1613060 5322383 Smed_1525 Sinorhizobium medicae WSM419 multi-sensor hybrid histidine kinase YP_001327202.1 1610442 R 366394 CDS YP_001327203.1 150396736 5322384 1613425..1614417 1 NC_009636.1 KEGG: sme:SMc00470 hypothetical protein; putative CheA signal transduction histidine kinase 1614417 5322384 Smed_1526 Sinorhizobium medicae WSM419 putative CheA signal transduction histidine kinase YP_001327203.1 1613425 D 366394 CDS YP_001327204.1 150396737 5322385 complement(1614545..1614964) 1 NC_009636.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: sme:SMc00469 putative dnaK suppresor protein; TraR/DksA family transcriptional regulator 1614964 5322385 Smed_1527 Sinorhizobium medicae WSM419 TraR/DksA family transcriptional regulator YP_001327204.1 1614545 R 366394 CDS YP_001327205.1 150396738 5322386 1615370..1615909 1 NC_009636.1 PFAM: Phosphoglycerate mutase; KEGG: sme:SMc00468 hypothetical protein; putative phosphohistidine phosphatase SixA 1615909 5322386 Smed_1528 Sinorhizobium medicae WSM419 putative phosphohistidine phosphatase SixA YP_001327205.1 1615370 D 366394 CDS YP_001327206.1 150396739 5322387 1616076..1617575 1 NC_009636.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: sme:SMc00467 hypothetical protein; hypothetical protein 1617575 5322387 Smed_1529 Sinorhizobium medicae WSM419 hypothetical protein YP_001327206.1 1616076 D 366394 CDS YP_001327207.1 150396740 5322388 1617572..1618657 1 NC_009636.1 PFAM: conserved hypothetical protein 1620; KEGG: sme:SMc00466 hypothetical protein; hypothetical protein 1618657 5322388 Smed_1530 Sinorhizobium medicae WSM419 hypothetical protein YP_001327207.1 1617572 D 366394 CDS YP_001327208.1 150396741 5322389 1618777..1619328 1 NC_009636.1 KEGG: sme:SMc00548 conserved hypothetical signal peptide protein; putative signal peptide protein 1619328 5322389 Smed_1531 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327208.1 1618777 D 366394 CDS YP_001327209.1 150396742 5322390 complement(1619378..1619902) 1 NC_009636.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: sme:SMc00465 probable 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase protein; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1619902 5322390 Smed_1532 Sinorhizobium medicae WSM419 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001327209.1 1619378 R 366394 CDS YP_001327210.1 150396743 5322391 complement(1619889..1620260) 1 NC_009636.1 TIGRFAM: dihydroneopterin aldolase; KEGG: sme:SMc00463 probable dihydroneopterin aldolase DhnA lyase folate biosynthesis protein; dihydroneopterin aldolase 1620260 5322391 Smed_1533 Sinorhizobium medicae WSM419 dihydroneopterin aldolase YP_001327210.1 1619889 R 366394 CDS YP_001327211.1 150396744 5322392 complement(1620257..1621126) 1 NC_009636.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: sme:SMc00462 probable dihydropteroate synthase antibiotic resistance transferase folate protein; dihydropteroate synthase 1621126 5322392 Smed_1534 Sinorhizobium medicae WSM419 dihydropteroate synthase YP_001327211.1 1620257 R 366394 CDS YP_001327212.1 150396745 5322393 1621269..1621949 1 NC_009636.1 PFAM: protein of unknown function DUF922; KEGG: sme:SMc00194 hypothetical protein; hypothetical protein 1621949 5322393 Smed_1535 Sinorhizobium medicae WSM419 hypothetical protein YP_001327212.1 1621269 D 366394 CDS YP_001327213.1 150396746 5322394 complement(1622486..1622806) 1 NC_009636.1 PFAM: ferredoxin; KEGG: sme:SMc00192 probable ferredoxin, 2FE-2S FdiI electron transport iron-sulfur protein; ferredoxin 1622806 5322394 Smed_1536 Sinorhizobium medicae WSM419 ferredoxin YP_001327213.1 1622486 R 366394 CDS YP_001327214.1 150396747 5322395 complement(1623096..1623464) 1 NC_009636.1 PFAM: Hpt domain protein; KEGG: sme:SMc00191 hypothetical protein; Hpt domain-containing protein 1623464 5322395 Smed_1537 Sinorhizobium medicae WSM419 Hpt domain-containing protein YP_001327214.1 1623096 R 366394 CDS YP_001327215.1 150396748 5322396 1623967..1630125 1 NC_009636.1 PFAM: chemotaxis sensory transducer; KEGG: sme:SMc00190 hypothetical protein; chemotaxis sensory transducer protein 1630125 5322396 Smed_1538 Sinorhizobium medicae WSM419 chemotaxis sensory transducer protein YP_001327215.1 1623967 D 366394 CDS YP_001327216.1 150396749 5322397 complement(1630779..1631648) 1 NC_009636.1 PFAM: cytochrome c1; KEGG: sme:SMc00189 ubiquinol-cytochrome c reductase cytochrome c1 subunit; cytochrome c1 1631648 5322397 Smed_1539 Sinorhizobium medicae WSM419 cytochrome c1 YP_001327216.1 1630779 R 366394 CDS YP_001327217.1 150396750 5322398 complement(1631680..1632960) 1 NC_009636.1 PFAM: Cytochrome b/b6 domain; KEGG: sme:SMc00188 ubiquinol-cytochrome c reductase cytochrome b subunit; cytochrome b/b6 domain-containing protein 1632960 5322398 Smed_1540 Sinorhizobium medicae WSM419 cytochrome b/b6 domain-containing protein YP_001327217.1 1631680 R 366394 CDS YP_001327218.1 150396751 5322399 complement(1632975..1633553) 1 NC_009636.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sme:SMc00187 ubiquinol-cytochrome c reductase iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1633553 5322399 Smed_1541 Sinorhizobium medicae WSM419 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001327218.1 1632975 R 366394 CDS YP_001327219.1 150396752 5322400 complement(1633870..1635735) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00186 putative ABC transporter ATP-binding transmembrane protein; ABC transporter-like protein 1635735 5322400 Smed_1542 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327219.1 1633870 R 366394 CDS YP_001327220.1 150396753 5322401 complement(1635852..1637705) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00185 putative ABC transporter ATP-binding transmembrane transmembrane protein; ABC transporter-like protein 1637705 5322401 Smed_1543 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327220.1 1635852 R 366394 CDS YP_001327221.1 150396754 5322402 1638184..1638645 1 NC_009636.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sme:SMc00184 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 1638645 5322402 Smed_1544 Sinorhizobium medicae WSM419 tRNA/rRNA methyltransferase SpoU YP_001327221.1 1638184 D 366394 CDS YP_001327222.1 150396755 5322403 complement(1638701..1639312) 1 NC_009636.1 PFAM: NADPH-dependent FMN reductase; KEGG: sme:SMc00183 hypothetical protein; NADPH-dependent FMN reductase 1639312 5322403 Smed_1545 Sinorhizobium medicae WSM419 NADPH-dependent FMN reductase YP_001327222.1 1638701 R 366394 CDS YP_001327223.1 150396756 5322404 1639352..1639837 1 NC_009636.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sme:SMc00182 putative transcription regulator protein; MerR family transcriptional regulator 1639837 5322404 Smed_1546 Sinorhizobium medicae WSM419 MerR family transcriptional regulator YP_001327223.1 1639352 D 366394 CDS YP_001327224.1 150396757 5322405 complement(1639842..1641026) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00196 putative transport protein transmembrane; major facilitator superfamily transporter 1641026 5322405 Smed_1547 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001327224.1 1639842 R 366394 CDS YP_001327225.1 150396758 5322406 complement(1641173..1641433) 1 NC_009636.1 KEGG: sme:SMc00181 hypothetical protein; hypothetical protein 1641433 5322406 Smed_1548 Sinorhizobium medicae WSM419 hypothetical protein YP_001327225.1 1641173 R 366394 CDS YP_001327226.1 150396759 5322407 1641637..1642548 1 NC_009636.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1642548 5322407 Smed_1549 Sinorhizobium medicae WSM419 coproporphyrinogen III oxidase YP_001327226.1 1641637 D 366394 CDS YP_001327227.1 150396760 5322408 1642633..1642911 1 NC_009636.1 PFAM: transport-associated; KEGG: sme:SMc00179 hypothetical/unknown protein; transport-associated protein 1642911 5322408 Smed_1550 Sinorhizobium medicae WSM419 transport-associated protein YP_001327227.1 1642633 D 366394 CDS YP_001327228.1 150396761 5322409 complement(1643085..1643699) 1 NC_009636.1 PFAM: protein of unknown function DUF330; KEGG: sme:SMc00177 hypothetical protein; hypothetical protein 1643699 5322409 Smed_1551 Sinorhizobium medicae WSM419 hypothetical protein YP_001327228.1 1643085 R 366394 CDS YP_001327229.1 150396762 5322410 complement(1643779..1645155) 1 NC_009636.1 PFAM: Mammalian cell entry related domain protein; KEGG: sme:SMc00176 conserved hypothetical protein; hypothetical protein 1645155 5322410 Smed_1552 Sinorhizobium medicae WSM419 hypothetical protein YP_001327229.1 1643779 R 366394 CDS YP_001327230.1 150396763 5322411 complement(1645242..1646048) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00175 putative ABC transporter ATP-binding protein; ABC transporter-like protein 1646048 5322411 Smed_1553 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327230.1 1645242 R 366394 CDS YP_001327231.1 150396764 5322412 complement(1646059..1647198) 1 NC_009636.1 PFAM: protein of unknown function DUF140; KEGG: sme:SMc00174 hypothetical transmembrane protein; hypothetical protein 1647198 5322412 Smed_1554 Sinorhizobium medicae WSM419 hypothetical protein YP_001327231.1 1646059 R 366394 CDS YP_001327232.1 150396765 5322413 1647384..1648367 1 NC_009636.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sme:SMc00459 putative mandelate racemase / muconate cycloisomerase; mandelate racemase/muconate lactonizing protein 1648367 5322413 Smed_1555 Sinorhizobium medicae WSM419 mandelate racemase/muconate lactonizing protein YP_001327232.1 1647384 D 366394 CDS YP_001327233.1 150396766 5322414 complement(1648319..1649542) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00172 putative transport protein transmembrane; major facilitator superfamily transporter 1649542 5322414 Smed_1556 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001327233.1 1648319 R 366394 CDS YP_001327234.1 150396767 5322415 complement(1649680..1650513) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc00171 hypothetical protein; metallophosphoesterase 1650513 5322415 Smed_1557 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001327234.1 1649680 R 366394 CDS YP_001327235.1 150396768 5322416 1650759..1653071 1 NC_009636.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 1653071 5322416 Smed_1558 Sinorhizobium medicae WSM419 malic enzyme YP_001327235.1 1650759 D 366394 CDS YP_001327236.1 150396769 5322417 1653276..1654016 1 NC_009636.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc00170 putative transcription regulator HSL-dependent protein; regulatory protein LuxR 1654016 5322417 Smed_1559 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001327236.1 1653276 D 366394 CDS YP_001327237.1 150396770 5322418 1654170..1654814 1 NC_009636.1 PFAM: autoinducer synthesis protein; KEGG: sme:SMc00168 putative autoinducer synthase protein; autoinducer synthesis protein 1654814 5322418 Smed_1560 Sinorhizobium medicae WSM419 autoinducer synthesis protein YP_001327237.1 1654170 D 366394 CDS YP_001327238.1 150396771 5322419 1655000..1656133 1 NC_009636.1 KEGG: sme:SMc00167 conserved hypothetical signal peptide protein; putative signal peptide protein 1656133 5322419 Smed_1561 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327238.1 1655000 D 366394 CDS YP_001327239.1 150396772 5322420 complement(1656248..1656943) 1 NC_009636.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: sme:SMc00166 putative oxidoreductase NAD protein; cob(II)yrinic acid a,c-diamide reductase 1656943 5322420 Smed_1562 Sinorhizobium medicae WSM419 cob(II)yrinic acid a,c-diamide reductase YP_001327239.1 1656248 R 366394 CDS YP_001327240.1 150396773 5322421 complement(1657242..1658063) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00165 short chain dehydrogenase; short chain dehydrogenase 1658063 5322421 Smed_1563 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001327240.1 1657242 R 366394 CDS YP_001327241.1 150396774 5322422 complement(1658206..1659939) 1 NC_009636.1 PFAM: Ankyrin; KEGG: sus:Acid_2197 ankyrin; ankyrin 1659939 5322422 Smed_1564 Sinorhizobium medicae WSM419 ankyrin YP_001327241.1 1658206 R 366394 CDS YP_001327242.1 150396775 5322424 complement(1660932..1662614) 1 NC_009636.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1662614 nadE 5322424 nadE Sinorhizobium medicae WSM419 NAD synthetase YP_001327242.1 1660932 R 366394 CDS YP_001327243.1 150396776 5322425 1662853..1664790 1 NC_009636.1 PFAM: sulfatase; KEGG: sme:SMc00195 cyclic beta-1,2-glucan modification transmembrane protein; sulfatase 1664790 5322425 Smed_1567 Sinorhizobium medicae WSM419 sulfatase YP_001327243.1 1662853 D 366394 CDS YP_001327244.1 150396777 5322426 1665165..1666127 1 NC_009636.1 KEGG: sme:SMc00157 hypothetical protein; hypothetical protein 1666127 5322426 Smed_1568 Sinorhizobium medicae WSM419 hypothetical protein YP_001327244.1 1665165 D 366394 CDS YP_001327245.1 150396778 5322427 complement(1666193..1666600) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc00156 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1666600 5322427 Smed_1569 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001327245.1 1666193 R 366394 CDS YP_001327246.1 150396779 5322428 complement(1666800..1668173) 1 NC_009636.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; KEGG: sme:SMc00155 phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 1668173 5322428 Smed_1570 Sinorhizobium medicae WSM419 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001327246.1 1666800 R 366394 CDS YP_001327247.1 150396780 5322429 complement(1668407..1669798) 1 NC_009636.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 1669798 5322429 Smed_1571 Sinorhizobium medicae WSM419 glutathione reductase YP_001327247.1 1668407 R 366394 CDS YP_001327248.1 150396781 5322430 complement(1669977..1670519) 1 NC_009636.1 KEGG: sme:SMc00153 hypothetical protein; hypothetical protein 1670519 5322430 Smed_1572 Sinorhizobium medicae WSM419 hypothetical protein YP_001327248.1 1669977 R 366394 CDS YP_001327249.1 150396782 5322431 complement(1670631..1671326) 1 NC_009636.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1671326 5322431 Smed_1573 Sinorhizobium medicae WSM419 ribose-5-phosphate isomerase A YP_001327249.1 1670631 R 366394 CDS YP_001327250.1 150396783 5322432 1671545..1672228 1 NC_009636.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 1672228 5322432 Smed_1574 Sinorhizobium medicae WSM419 phosphoglycolate phosphatase YP_001327250.1 1671545 D 366394 CDS YP_001327251.1 150396784 5322433 complement(1672262..1674157) 1 NC_009636.1 KEGG: sme:SMc00150 hypothetical protein; hypothetical protein 1674157 5322433 Smed_1575 Sinorhizobium medicae WSM419 hypothetical protein YP_001327251.1 1672262 R 366394 CDS YP_001327252.1 150396785 5322434 1674597..1676045 1 NC_009636.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1676045 fumC 5322434 fumC Sinorhizobium medicae WSM419 fumarate hydratase YP_001327252.1 1674597 D 366394 CDS YP_001327253.1 150396786 5322435 complement(1676091..1676699) 1 NC_009636.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sme:SMc00148 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1676699 5322435 Smed_1577 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001327253.1 1676091 R 366394 CDS YP_001327254.1 150396787 5322436 complement(1676793..1677710) 1 NC_009636.1 KEGG: sme:SMc00147 hypothetical protein; hypothetical protein 1677710 5322436 Smed_1578 Sinorhizobium medicae WSM419 hypothetical protein YP_001327254.1 1676793 R 366394 CDS YP_001327255.1 150396788 5322437 1677725..1678246 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc00146 putative transcription regulator protein; MarR family transcriptional regulator 1678246 5322437 Smed_1579 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001327255.1 1677725 D 366394 CDS YP_001327256.1 150396789 5322438 complement(1678289..1678663) 1 NC_009636.1 PFAM: protein of unknown function DUF971; KEGG: sme:SMc00145 hypothetical protein; hypothetical protein 1678663 5322438 Smed_1580 Sinorhizobium medicae WSM419 hypothetical protein YP_001327256.1 1678289 R 366394 CDS YP_001327257.1 150396790 5322439 complement(1678660..1678818) 1 NC_009636.1 KEGG: sme:SMc00145 hypothetical protein; hypothetical protein 1678818 5322439 Smed_1581 Sinorhizobium medicae WSM419 hypothetical protein YP_001327257.1 1678660 R 366394 CDS YP_001327258.1 150396791 5322440 1678822..1679871 1 NC_009636.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1679871 moaA 5322440 moaA Sinorhizobium medicae WSM419 molybdenum cofactor biosynthesis protein A YP_001327258.1 1678822 D 366394 CDS YP_001327259.1 150396792 5322441 1680111..1681019 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00197 hypothetical protein; hypothetical protein 1681019 5322441 Smed_1583 Sinorhizobium medicae WSM419 hypothetical protein YP_001327259.1 1680111 D 366394 CDS YP_001327260.1 150396793 5322442 1681033..1681692 1 NC_009636.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1681692 mobA 5322442 mobA Sinorhizobium medicae WSM419 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001327260.1 1681033 D 366394 CDS YP_001327261.1 150396794 5322443 1681689..1682213 1 NC_009636.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: sme:SMc00142 probable molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1682213 5322443 Smed_1585 Sinorhizobium medicae WSM419 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_001327261.1 1681689 D 366394 CDS YP_001327262.1 150396795 5322444 complement(1682346..1683488) 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 1683488 5322444 Smed_1586 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001327262.1 1682346 R 366394 CDS YP_001327263.1 150396796 5322445 complement(1683609..1685771) 1 NC_009636.1 PFAM: OmpA/MotB domain protein; KEGG: sme:SMc00141 hypothetical protein; OmpA/MotB domain-containing protein 1685771 5322445 Smed_1587 Sinorhizobium medicae WSM419 OmpA/MotB domain-containing protein YP_001327263.1 1683609 R 366394 CDS YP_001327264.1 150396797 5322446 1686274..1687056 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: sme:SMc00140 putative amino-acid binding periplasmic protein; extracellular solute-binding protein 1687056 5322446 Smed_1588 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327264.1 1686274 D 366394 CDS YP_001327265.1 150396798 5322447 1687251..1688054 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00139 putative amino acid transport system permease protein; polar amino acid ABC transporter inner membrane subunit 1688054 5322447 Smed_1589 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001327265.1 1687251 D 366394 CDS YP_001327266.1 150396799 5322448 1688051..1688881 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00138 putative amino acid transport system permease protein; polar amino acid ABC transporter inner membrane subunit 1688881 5322448 Smed_1590 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001327266.1 1688051 D 366394 CDS YP_001327267.1 150396800 5322449 1689052..1689318 1 NC_009636.1 PFAM: Usg family protein; KEGG: sme:SMc00137 hypothetical protein; Usg family protein 1689318 5322449 Smed_1591 Sinorhizobium medicae WSM419 Usg family protein YP_001327267.1 1689052 D 366394 CDS YP_001327268.1 150396801 5322450 complement(1689350..1690054) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc00136 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 1690054 5322450 Smed_1592 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327268.1 1689350 R 366394 CDS YP_001327269.1 150396802 5322451 complement(1690167..1690853) 1 NC_009636.1 KEGG: sme:SMc00135 hypothetical protein; hypothetical protein 1690853 5322451 Smed_1593 Sinorhizobium medicae WSM419 hypothetical protein YP_001327269.1 1690167 R 366394 CDS YP_001327270.1 150396803 5322452 1691161..1691985 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc00134 hypothetical protein; type 12 methyltransferase 1691985 5322452 Smed_1594 Sinorhizobium medicae WSM419 type 12 methyltransferase YP_001327270.1 1691161 D 366394 CDS YP_001327271.1 150396804 5322453 1692037..1692906 1 NC_009636.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMc00133 putative oxidoreductase protein; 6-phosphogluconate dehydrogenase 1692906 5322453 Smed_1595 Sinorhizobium medicae WSM419 6-phosphogluconate dehydrogenase YP_001327271.1 1692037 D 366394 CDS YP_001327272.1 150396805 5322454 1692903..1693601 1 NC_009636.1 KEGG: sme:SMc00132 hypothetical protein; hypothetical protein 1693601 5322454 Smed_1596 Sinorhizobium medicae WSM419 hypothetical protein YP_001327272.1 1692903 D 366394 CDS YP_001327273.1 150396806 5322455 complement(1693695..1694183) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc00131 putative transcription regulator protein; AsnC family transcriptional regulator 1694183 5322455 Smed_1597 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001327273.1 1693695 R 366394 CDS YP_001327274.1 150396807 5322456 complement(1694250..1694903) 1 NC_009636.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: sme:SMc04210 hypothetical protein; uracil-DNA glycosylase superfamily protein 1694903 5322456 Smed_1598 Sinorhizobium medicae WSM419 uracil-DNA glycosylase superfamily protein YP_001327274.1 1694250 R 366394 CDS YP_001327275.1 150396808 5322457 complement(1694872..1695459) 1 NC_009636.1 PFAM: nuclease (SNase domain protein); KEGG: sme:SMc04211 hypothetical protein; nuclease 1695459 5322457 Smed_1599 Sinorhizobium medicae WSM419 nuclease YP_001327275.1 1694872 R 366394 CDS YP_001327276.1 150396809 5322458 1695735..1697270 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc04212 putative sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 1697270 5322458 Smed_1600 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001327276.1 1695735 D 366394 CDS YP_001327277.1 150396810 5322459 1697549..1698481 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 1698481 5322459 Smed_1601 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001327277.1 1697549 D 366394 CDS YP_001327278.1 150396811 5322460 complement(1698534..1699016) 1 NC_009636.1 PFAM: diacylglycerol kinase; KEGG: sme:SMc04213 diacylglycerol kinase protein; diacylglycerol kinase 1699016 5322460 Smed_1602 Sinorhizobium medicae WSM419 diacylglycerol kinase YP_001327278.1 1698534 R 366394 CDS YP_001327279.1 150396812 5322461 complement(1699083..1700099) 1 NC_009636.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1700099 cobT 5322461 cobT Sinorhizobium medicae WSM419 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001327279.1 1699083 R 366394 CDS YP_001327280.1 150396813 5322462 1700237..1701025 1 NC_009636.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 1701025 cobS 5322462 cobS Sinorhizobium medicae WSM419 cobalamin synthase YP_001327280.1 1700237 D 366394 CDS YP_001327281.1 150396814 5322463 1701071..1701292 1 NC_009636.1 PFAM: protein of unknown function DUF1289; KEGG: sme:SMc04216 hypothetical protein; hypothetical protein 1701292 5322463 Smed_1605 Sinorhizobium medicae WSM419 hypothetical protein YP_001327281.1 1701071 D 366394 CDS YP_001327282.1 150396815 5322464 1701289..1701990 1 NC_009636.1 KEGG: sme:SMc04217 hypothetical transmembrane signal peptide protein; putative transmembrane signal peptide protein 1701990 5322464 Smed_1606 Sinorhizobium medicae WSM419 putative transmembrane signal peptide protein YP_001327282.1 1701289 D 366394 CDS YP_001327283.1 150396816 5322465 complement(1701998..1702759) 1 NC_009636.1 PFAM: ABC-2 type transporter; KEGG: sme:SMc04218 putative transport transmembrane protein; ABC transporter 1702759 5322465 Smed_1607 Sinorhizobium medicae WSM419 ABC transporter YP_001327283.1 1701998 R 366394 CDS YP_001327284.1 150396817 5322466 complement(1702756..1703682) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04219 putative ATP-binding ABC transporter protein; ABC transporter-like protein 1703682 5322466 Smed_1608 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327284.1 1702756 R 366394 CDS YP_001327285.1 150396818 5322467 complement(1703855..1704187) 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc04220 putative transcription regulator protein; regulatory protein ArsR 1704187 5322467 Smed_1609 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001327285.1 1703855 R 366394 CDS YP_001327286.1 150396819 5322468 complement(1704197..1705087) 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMa1057 hypothetical protein; beta-lactamase domain-containing protein 1705087 5322468 Smed_1610 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001327286.1 1704197 R 366394 CDS YP_001327287.1 150396820 5322469 complement(1705251..1706423) 1 NC_009636.1 PFAM: Extensin family protein; KEGG: sme:SMc04225 hypothetical protein; extensin family protein 1706423 5322469 Smed_1611 Sinorhizobium medicae WSM419 extensin family protein YP_001327287.1 1705251 R 366394 CDS YP_001327288.1 150396821 5322470 complement(1706706..1707257) 1 NC_009636.1 PFAM: protease inhibitor Kazal-type; SMART: proteinase inhibitor I1 Kazal; KEGG: sme:SMc04226 hypothetical lipoprotein transmembrane; protease inhibitor Kazal-type 1707257 5322470 Smed_1612 Sinorhizobium medicae WSM419 protease inhibitor Kazal-type YP_001327288.1 1706706 R 366394 CDS YP_001327289.1 150396822 5322471 complement(1707483..1709294) 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sme:SMc04227 probable chemoreceptor (methyl-accepting chemotaxis) transmembrane protein; methyl-accepting chemotaxis sensory transducer 1709294 5322471 Smed_1613 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001327289.1 1707483 R 366394 CDS YP_001327290.1 150396823 5322472 1709504..1709893 1 NC_009636.1 PFAM: thioesterase superfamily protein; KEGG: sme:SMc04228 putative acyl-CoA thioester hydrolase; thioesterase superfamily protein 1709893 5322472 Smed_1614 Sinorhizobium medicae WSM419 thioesterase superfamily protein YP_001327290.1 1709504 D 366394 CDS YP_001327291.1 150396824 5322473 1709905..1710495 1 NC_009636.1 KEGG: sme:SMc04229 hypothetical protein; hypothetical protein 1710495 5322473 Smed_1615 Sinorhizobium medicae WSM419 hypothetical protein YP_001327291.1 1709905 D 366394 CDS YP_001327292.1 150396825 5322474 complement(1710533..1710886) 1 NC_009636.1 PFAM: protein of unknown function DUF486; KEGG: sme:SMc04230 hypothetical transmembrane signal peptide protein; hypothetical protein 1710886 5322474 Smed_1616 Sinorhizobium medicae WSM419 hypothetical protein YP_001327292.1 1710533 R 366394 CDS YP_001327293.1 150396826 5322475 1711062..1713998 1 NC_009636.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1713998 5322475 Smed_1617 Sinorhizobium medicae WSM419 excinuclease ABC subunit B YP_001327293.1 1711062 D 366394 CDS YP_001327294.1 150396827 5322476 1714214..1714861 1 NC_009636.1 KEGG: sme:SMc04232 hypothetical glycine rich transmembrane protein; glycine rich transmembrane protein 1714861 5322476 Smed_1618 Sinorhizobium medicae WSM419 glycine rich transmembrane protein YP_001327294.1 1714214 D 366394 CDS YP_001327295.1 150396828 5322477 complement(1714949..1715566) 1 NC_009636.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sme:SMc04233 hypothetical DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1715566 5322477 Smed_1619 Sinorhizobium medicae WSM419 heat shock protein DnaJ domain-containing protein YP_001327295.1 1714949 R 366394 CDS YP_001327296.1 150396829 5322478 1716066..1716278 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc04234 putative cold shock-like transcription regulator protein; cold-shock DNA-binding domain-containing protein 1716278 5322478 Smed_1620 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001327296.1 1716066 D 366394 CDS YP_001327297.1 150396830 5322479 complement(1716358..1717515) 1 NC_009636.1 PFAM: dihydrouridine synthase DuS; KEGG: sme:SMc04235 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 1717515 5322479 Smed_1621 Sinorhizobium medicae WSM419 tRNA-dihydrouridine synthase A YP_001327297.1 1716358 R 366394 CDS YP_001327298.1 150396831 5322480 1717608..1718693 1 NC_009636.1 PFAM: phage integrase family protein; KEGG: pfl:PFL_1976 site-specific recombinase, phage integrase family; phage integrase family protein 1718693 5322480 Smed_1622 Sinorhizobium medicae WSM419 phage integrase family protein YP_001327298.1 1717608 D 366394 CDS YP_001327299.1 150396832 5322482 complement(1719116..1720348) 1 NC_009636.1 KEGG: sdn:Sden_1215 hypothetical protein; hypothetical protein 1720348 5322482 Smed_1624 Sinorhizobium medicae WSM419 hypothetical protein YP_001327299.1 1719116 R 366394 CDS YP_001327300.1 150396833 5322483 complement(1720454..1720735) 1 NC_009636.1 hypothetical protein 1720735 5322483 Smed_1625 Sinorhizobium medicae WSM419 hypothetical protein YP_001327300.1 1720454 R 366394 CDS YP_001327301.1 150396834 5322485 1721674..1721868 1 NC_009636.1 hypothetical protein 1721868 5322485 Smed_1627 Sinorhizobium medicae WSM419 hypothetical protein YP_001327301.1 1721674 D 366394 CDS YP_001327302.1 150396835 5322486 complement(1721977..1722486) 1 NC_009636.1 KEGG: rle:RL1144 hypothetical protein; hypothetical protein 1722486 5322486 Smed_1628 Sinorhizobium medicae WSM419 hypothetical protein YP_001327302.1 1721977 R 366394 CDS YP_001327303.1 150396836 5322488 complement(1723189..1724139) 1 NC_009636.1 KEGG: mlo:mlr2725 hypothetical protein; hypothetical protein 1724139 5322488 Smed_1630 Sinorhizobium medicae WSM419 hypothetical protein YP_001327303.1 1723189 R 366394 CDS YP_001327304.1 150396837 5322489 complement(1724202..1724864) 1 NC_009636.1 KEGG: mlo:mlr9067 hypothetical protein; hypothetical protein 1724864 5322489 Smed_1631 Sinorhizobium medicae WSM419 hypothetical protein YP_001327304.1 1724202 R 366394 CDS YP_001327305.1 150396838 5322490 1725869..1726573 1 NC_009636.1 PFAM: Thioredoxin domain; KEGG: sme:SMc02761 probable thioredoxin protein; thioredoxin domain-containing protein 1726573 5322490 Smed_1632 Sinorhizobium medicae WSM419 thioredoxin domain-containing protein YP_001327305.1 1725869 D 366394 CDS YP_001327306.1 150396839 5322491 1727568..1728284 1 NC_009636.1 PFAM: Necrosis inducing; KEGG: bld:BLi01595 hypothetical protein; necrosis-inducing protein 1728284 5322491 Smed_1633 Sinorhizobium medicae WSM419 necrosis-inducing protein YP_001327306.1 1727568 D 366394 CDS YP_001327307.1 150396840 5322492 complement(1728565..1728891) 1 NC_009636.1 KEGG: atc:AGR_C_824 hypothetical protein; hypothetical protein 1728891 5322492 Smed_1634 Sinorhizobium medicae WSM419 hypothetical protein YP_001327307.1 1728565 R 366394 CDS YP_001327308.1 150396841 5322494 complement(1729258..1730073) 1 NC_009636.1 KEGG: sme:SMc04183 putative transmembrane protein; putative transmembrane protein 1730073 5322494 Smed_1636 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327308.1 1729258 R 366394 CDS YP_001327309.1 150396842 5322495 complement(1730335..1730673) 1 NC_009636.1 hypothetical protein 1730673 5322495 Smed_1637 Sinorhizobium medicae WSM419 hypothetical protein YP_001327309.1 1730335 R 366394 CDS YP_001327310.1 150396843 5322496 complement(1730660..1731007) 1 NC_009636.1 KEGG: psp:PSPPH_2395 hypothetical protein; hypothetical protein 1731007 5322496 Smed_1638 Sinorhizobium medicae WSM419 hypothetical protein YP_001327310.1 1730660 R 366394 CDS YP_001327311.1 150396844 5322497 complement(1731007..1732131) 1 NC_009636.1 KEGG: pae:PA0643 hypothetical protein; hypothetical protein 1732131 5322497 Smed_1639 Sinorhizobium medicae WSM419 hypothetical protein YP_001327311.1 1731007 R 366394 CDS YP_001327312.1 150396845 5322498 complement(1732143..1733657) 1 NC_009636.1 hypothetical protein 1733657 5322498 Smed_1640 Sinorhizobium medicae WSM419 hypothetical protein YP_001327312.1 1732143 R 366394 CDS YP_001327313.1 150396846 5322499 complement(1733657..1736314) 1 NC_009636.1 KEGG: rsp:RSP_2990 hypothetical protein; hypothetical protein 1736314 5322499 Smed_1641 Sinorhizobium medicae WSM419 hypothetical protein YP_001327313.1 1733657 R 366394 CDS YP_001327314.1 150396847 5322500 complement(1736321..1736725) 1 NC_009636.1 KEGG: aba:Acid345_3157 hypothetical protein; hypothetical protein 1736725 5322500 Smed_1642 Sinorhizobium medicae WSM419 hypothetical protein YP_001327314.1 1736321 R 366394 CDS YP_001327315.1 150396848 5322501 1737035..1738156 1 NC_009636.1 outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA; outer membrane protease 1738156 5322501 Smed_1643 Sinorhizobium medicae WSM419 outer membrane protease YP_001327315.1 1737035 D 366394 CDS YP_001327316.1 150396849 5322502 complement(1738418..1739008) 1 NC_009636.1 hypothetical protein 1739008 5322502 Smed_1644 Sinorhizobium medicae WSM419 hypothetical protein YP_001327316.1 1738418 R 366394 CDS YP_001327317.1 150396850 5322503 complement(1739005..1739655) 1 NC_009636.1 hypothetical protein 1739655 5322503 Smed_1645 Sinorhizobium medicae WSM419 hypothetical protein YP_001327317.1 1739005 R 366394 CDS YP_001327318.1 150396851 5322504 complement(1739655..1741526) 1 NC_009636.1 KEGG: rsp:RSP_2351 hypothetical protein; hypothetical protein 1741526 5322504 Smed_1646 Sinorhizobium medicae WSM419 hypothetical protein YP_001327318.1 1739655 R 366394 CDS YP_001327319.1 150396852 5322505 complement(1741800..1742063) 1 NC_009636.1 hypothetical protein 1742063 5322505 Smed_1647 Sinorhizobium medicae WSM419 hypothetical protein YP_001327319.1 1741800 R 366394 CDS YP_001327320.1 150396853 5322506 complement(1742060..1742440) 1 NC_009636.1 hypothetical protein 1742440 5322506 Smed_1648 Sinorhizobium medicae WSM419 hypothetical protein YP_001327320.1 1742060 R 366394 CDS YP_001327321.1 150396854 5322507 complement(1742453..1742863) 1 NC_009636.1 KEGG: nha:Nham_1419 phage major tail protein, TP901-1; phage major tail protein, TP901-1 1742863 5322507 Smed_1649 Sinorhizobium medicae WSM419 phage major tail protein, TP901-1 YP_001327321.1 1742453 R 366394 CDS YP_001327322.1 150396855 5322508 complement(1742957..1743421) 1 NC_009636.1 hypothetical protein 1743421 5322508 Smed_1650 Sinorhizobium medicae WSM419 hypothetical protein YP_001327322.1 1742957 R 366394 CDS YP_001327323.1 150396856 5322509 complement(1743423..1743719) 1 NC_009636.1 hypothetical protein 1743719 5322509 Smed_1651 Sinorhizobium medicae WSM419 hypothetical protein YP_001327323.1 1743423 R 366394 CDS YP_001327324.1 150396857 5322510 complement(1743722..1744048) 1 NC_009636.1 hypothetical protein 1744048 5322510 Smed_1652 Sinorhizobium medicae WSM419 hypothetical protein YP_001327324.1 1743722 R 366394 CDS YP_001327325.1 150396858 5322511 complement(1744045..1744449) 1 NC_009636.1 KEGG: lma:LmjF34.0690 hypothetical protein, conserved; hypothetical protein 1744449 5322511 Smed_1653 Sinorhizobium medicae WSM419 hypothetical protein YP_001327325.1 1744045 R 366394 CDS YP_001327326.1 150396859 5322512 complement(1744524..1745555) 1 NC_009636.1 PFAM: phage major capsid protein E; KEGG: hch:HCH_02898 type II secretory pathway, pullulanase PulA and related glycosidase; phage major capsid protein E 1745555 5322512 Smed_1654 Sinorhizobium medicae WSM419 phage major capsid protein E YP_001327326.1 1744524 R 366394 CDS YP_001327327.1 150396860 5322513 complement(1745583..1745939) 1 NC_009636.1 KEGG: gox:GOX2342 hypothetical protein; hypothetical protein 1745939 5322513 Smed_1655 Sinorhizobium medicae WSM419 hypothetical protein YP_001327327.1 1745583 R 366394 CDS YP_001327328.1 150396861 5322514 complement(1745942..1746484) 1 NC_009636.1 KEGG: bxe:Bxe_A3062 hypothetical protein; hypothetical protein 1746484 5322514 Smed_1656 Sinorhizobium medicae WSM419 hypothetical protein YP_001327328.1 1745942 R 366394 CDS YP_001327329.1 150396862 5322515 complement(1746510..1747415) 1 NC_009636.1 PFAM: peptidase S49; KEGG: rsp:RSP_3784 peptidase U7; peptidase S49 1747415 5322515 Smed_1657 Sinorhizobium medicae WSM419 peptidase S49 YP_001327329.1 1746510 R 366394 CDS YP_001327330.1 150396863 5322516 complement(1747412..1749136) 1 NC_009636.1 TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein lambda; KEGG: gox:GOX2339 bacteriophage capsid structural protein; lambda family phage portal protein 1749136 5322516 Smed_1658 Sinorhizobium medicae WSM419 lambda family phage portal protein YP_001327330.1 1747412 R 366394 CDS YP_001327331.1 150396864 5322517 complement(1749133..1749369) 1 NC_009636.1 hypothetical protein 1749369 5322517 Smed_1659 Sinorhizobium medicae WSM419 hypothetical protein YP_001327331.1 1749133 R 366394 CDS YP_001327332.1 150396865 5322518 complement(1749380..1751422) 1 NC_009636.1 PFAM: phage terminase GpA; KEGG: mca:MCA2658 prophage LambdaMc01, terminase, large subunit; phage terminase GpA 1751422 5322518 Smed_1660 Sinorhizobium medicae WSM419 phage terminase GpA YP_001327332.1 1749380 R 366394 CDS YP_001327333.1 150396866 5322519 complement(1751419..1752060) 1 NC_009636.1 hypothetical protein 1752060 5322519 Smed_1661 Sinorhizobium medicae WSM419 hypothetical protein YP_001327333.1 1751419 R 366394 CDS YP_001327334.1 150396867 5322520 complement(1752210..1752956) 1 NC_009636.1 KEGG: xfa:XF0515 hypothetical protein; hypothetical protein 1752956 5322520 Smed_1662 Sinorhizobium medicae WSM419 hypothetical protein YP_001327334.1 1752210 R 366394 CDS YP_001327335.1 150396868 5322521 complement(1753185..1753844) 1 NC_009636.1 PFAM: transcription antitermination protein NusG; KEGG: atc:AGR_C_797 transcription antitermination protein NusG; NusG antitermination factor 1753844 5322521 Smed_1663 Sinorhizobium medicae WSM419 NusG antitermination factor YP_001327335.1 1753185 R 366394 CDS YP_001327336.1 150396869 5322522 complement(1753828..1755081) 1 NC_009636.1 KEGG: atc:AGR_C_796 hypothetical protein; hypothetical protein 1755081 5322522 Smed_1664 Sinorhizobium medicae WSM419 hypothetical protein YP_001327336.1 1753828 R 366394 CDS YP_001327337.1 150396870 5322523 1755192..1755440 1 NC_009636.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb21471 hypothetical protein; hypothetical protein 1755440 5322523 Smed_1665 Sinorhizobium medicae WSM419 hypothetical protein YP_001327337.1 1755192 D 366394 CDS YP_001327338.1 150396871 5322524 complement(1755446..1755751) 1 NC_009636.1 KEGG: atc:AGR_C_795 hypothetical protein; hypothetical protein 1755751 5322524 Smed_1666 Sinorhizobium medicae WSM419 hypothetical protein YP_001327338.1 1755446 R 366394 CDS YP_001327339.1 150396872 5322525 complement(1755748..1757271) 1 NC_009636.1 PFAM: MT-A70 family protein; KEGG: mgm:Mmc1_2604 MT-A70 family protein; MT-A70 family protein 1757271 5322525 Smed_1667 Sinorhizobium medicae WSM419 MT-A70 family protein YP_001327339.1 1755748 R 366394 CDS YP_001327340.1 150396873 5322526 complement(1757268..1757474) 1 NC_009636.1 hypothetical protein 1757474 5322526 Smed_1668 Sinorhizobium medicae WSM419 hypothetical protein YP_001327340.1 1757268 R 366394 CDS YP_001327341.1 150396874 5322527 complement(1757471..1757719) 1 NC_009636.1 hypothetical protein 1757719 5322527 Smed_1669 Sinorhizobium medicae WSM419 hypothetical protein YP_001327341.1 1757471 R 366394 CDS YP_001327342.1 150396875 5322528 complement(1757719..1757940) 1 NC_009636.1 hypothetical protein 1757940 5322528 Smed_1670 Sinorhizobium medicae WSM419 hypothetical protein YP_001327342.1 1757719 R 366394 CDS YP_001327343.1 150396876 5322529 complement(1757940..1758395) 1 NC_009636.1 hypothetical protein 1758395 5322529 Smed_1671 Sinorhizobium medicae WSM419 hypothetical protein YP_001327343.1 1757940 R 366394 CDS YP_001327344.1 150396877 5322530 complement(1758615..1758866) 1 NC_009636.1 KEGG: mes:Meso_1194 hypothetical protein; hypothetical protein 1758866 5322530 Smed_1672 Sinorhizobium medicae WSM419 hypothetical protein YP_001327344.1 1758615 R 366394 CDS YP_001327345.1 150396878 5322531 1758955..1759656 1 NC_009636.1 PFAM: peptidase S24 S26A and S26B; SMART: helix-turn-helix domain protein; KEGG: nha:Nham_3352 putative phage repressor; putative phage repressor 1759656 5322531 Smed_1673 Sinorhizobium medicae WSM419 putative phage repressor YP_001327345.1 1758955 D 366394 CDS YP_001327346.1 150396879 5322532 1759765..1760061 1 NC_009636.1 hypothetical protein 1760061 5322532 Smed_1674 Sinorhizobium medicae WSM419 hypothetical protein YP_001327346.1 1759765 D 366394 CDS YP_001327347.1 150396880 5322533 1760184..1760357 1 NC_009636.1 hypothetical protein 1760357 5322533 Smed_1675 Sinorhizobium medicae WSM419 hypothetical protein YP_001327347.1 1760184 D 366394 CDS YP_001327348.1 150396881 5322534 1760368..1760724 1 NC_009636.1 hypothetical protein 1760724 5322534 Smed_1676 Sinorhizobium medicae WSM419 hypothetical protein YP_001327348.1 1760368 D 366394 CDS YP_001327349.1 150396882 5322535 1760896..1761267 1 NC_009636.1 KEGG: pde:Pden_0257 hypothetical protein; hypothetical protein 1761267 5322535 Smed_1677 Sinorhizobium medicae WSM419 hypothetical protein YP_001327349.1 1760896 D 366394 CDS YP_001327350.1 150396883 5322536 1761267..1761806 1 NC_009636.1 KEGG: mlo:mlr8516 hypothetical protein; hypothetical protein 1761806 5322536 Smed_1678 Sinorhizobium medicae WSM419 hypothetical protein YP_001327350.1 1761267 D 366394 CDS YP_001327351.1 150396884 5322537 1761803..1762168 1 NC_009636.1 KEGG: mkm:Mkms_2959 HNH endonuclease; hypothetical protein 1762168 5322537 Smed_1679 Sinorhizobium medicae WSM419 hypothetical protein YP_001327351.1 1761803 D 366394 CDS YP_001327352.1 150396885 5322538 1762171..1762464 1 NC_009636.1 KEGG: bam:Bamb_2416 hypothetical protein; hypothetical protein 1762464 5322538 Smed_1680 Sinorhizobium medicae WSM419 hypothetical protein YP_001327352.1 1762171 D 366394 CDS YP_001327353.1 150396886 5322539 1762667..1763488 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sme:SMa1727 putative hydrolase; alpha/beta hydrolase fold protein 1763488 5322539 Smed_1681 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001327353.1 1762667 D 366394 CDS YP_001327354.1 150396887 5322540 1763657..1763800 1 NC_009636.1 hypothetical protein 1763800 5322540 Smed_1682 Sinorhizobium medicae WSM419 hypothetical protein YP_001327354.1 1763657 D 366394 CDS YP_001327355.1 150396888 5322541 1764394..1767762 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; KEGG: sme:SMa1591 putative adenylate cyclase; sterile alpha motif-containing protein 1767762 5322541 Smed_1683 Sinorhizobium medicae WSM419 sterile alpha motif-containing protein YP_001327355.1 1764394 D 366394 CDS YP_001327356.1 150396889 5322542 1768649..1768837 1 NC_009636.1 KEGG: sme:SMb21682 hypothetical protein; hypothetical protein 1768837 5322542 Smed_1684 Sinorhizobium medicae WSM419 hypothetical protein YP_001327356.1 1768649 D 366394 CDS YP_001327357.1 150396890 5322543 complement(1768873..1769091) 1 NC_009636.1 KEGG: rle:pRL110469 hypothetical protein; hypothetical protein 1769091 5322543 Smed_1685 Sinorhizobium medicae WSM419 hypothetical protein YP_001327357.1 1768873 R 366394 CDS YP_001327358.1 150396891 5322545 complement(1769456..1769629) 1 NC_009636.1 KEGG: sme:SMb21683 hypothetical protein; hypothetical protein 1769629 5322545 Smed_1687 Sinorhizobium medicae WSM419 hypothetical protein YP_001327358.1 1769456 R 366394 CDS YP_001327359.1 150396892 5322546 1770092..1770730 1 NC_009636.1 KEGG: sme:SMc04236 putative glycine-rich cell wall structural transmembrane protein; putative glycine-rich cell wall structural transmembrane protein 1770730 5322546 Smed_1688 Sinorhizobium medicae WSM419 putative glycine-rich cell wall structural transmembrane protein YP_001327359.1 1770092 D 366394 CDS YP_001327360.1 150396893 5322547 complement(1770836..1771084) 1 NC_009636.1 KEGG: sme:SMc04237 hypothetical protein; hypothetical protein 1771084 5322547 Smed_1689 Sinorhizobium medicae WSM419 hypothetical protein YP_001327360.1 1770836 R 366394 CDS YP_001327361.1 150396894 5322548 1771488..1771724 1 NC_009636.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMc04238 hypothetical protein; hypothetical protein 1771724 5322548 Smed_1690 Sinorhizobium medicae WSM419 hypothetical protein YP_001327361.1 1771488 D 366394 CDS YP_001327362.1 150396895 5322549 1772197..1772403 1 NC_009636.1 KEGG: sme:SMc04239 hypothetical protein; hypothetical protein 1772403 5322549 Smed_1691 Sinorhizobium medicae WSM419 hypothetical protein YP_001327362.1 1772197 D 366394 CDS YP_001327363.1 150396896 5322550 1772592..1773278 1 NC_009636.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sme:SMc04240 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 1773278 5322550 Smed_1692 Sinorhizobium medicae WSM419 fumarylacetoacetate (FAA) hydrolase YP_001327363.1 1772592 D 366394 CDS YP_001327364.1 150396897 5322551 1773342..1773872 1 NC_009636.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sme:SMc04241 putative acetyltransferase protein; hexapaptide repeat-containing transferase 1773872 5322551 Smed_1693 Sinorhizobium medicae WSM419 hexapaptide repeat-containing transferase YP_001327364.1 1773342 D 366394 CDS YP_001327365.1 150396898 5322552 complement(1773899..1774297) 1 NC_009636.1 KEGG: sme:SMc04242 putative zinc uptake regulation protein; ferric uptake regulator family protein 1774297 5322552 Smed_1694 Sinorhizobium medicae WSM419 ferric uptake regulator family protein YP_001327365.1 1773899 R 366394 CDS YP_001327366.1 150396899 5322553 complement(1774297..1775124) 1 NC_009636.1 PFAM: ABC-3 protein; KEGG: sme:SMc04243 probable high-affinity zinc uptake system membrane ABC transporter protein; ABC-3 protein 1775124 5322553 Smed_1695 Sinorhizobium medicae WSM419 ABC-3 protein YP_001327366.1 1774297 R 366394 CDS YP_001327367.1 150396900 5322554 complement(1775117..1776022) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04244 probable high-affinity zinc uptake system ATP-binding ABC transporter protein; ABC transporter-like protein 1776022 5322554 Smed_1696 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327367.1 1775117 R 366394 CDS YP_001327368.1 150396901 5322555 1776166..1777209 1 NC_009636.1 PFAM: periplasmic solute binding protein; KEGG: sme:SMc04245 probable high-affinity zinc uptake system ABC transporter protein; periplasmic solute binding protein 1777209 5322555 Smed_1697 Sinorhizobium medicae WSM419 periplasmic solute binding protein YP_001327368.1 1776166 D 366394 CDS YP_001327369.1 150396902 5322556 complement(1777223..1777936) 1 NC_009636.1 PFAM: LmbE family protein; KEGG: vei:Veis_0048 LmbE family protein; LmbE family protein 1777936 5322556 Smed_1698 Sinorhizobium medicae WSM419 LmbE family protein YP_001327369.1 1777223 R 366394 CDS YP_001327370.1 150396903 5322557 complement(1777948..1779015) 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: jan:Jann_1287 ABC transporter related; ABC transporter-like protein 1779015 5322557 Smed_1699 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327370.1 1777948 R 366394 CDS YP_001327371.1 150396904 5322558 complement(1779027..1779872) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO1063 putative sugar transport integral membrane protein; binding-protein-dependent transport system inner membrane protein 1779872 5322558 Smed_1700 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327371.1 1779027 R 366394 CDS YP_001327372.1 150396905 5322559 complement(1779869..1780795) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpa:MAP1768c sugar ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1780795 5322559 Smed_1701 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327372.1 1779869 R 366394 CDS YP_001327373.1 150396906 5322560 complement(1780799..1782067) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: gvi:glr3199 sugar binding protein; extracellular solute-binding protein 1782067 5322560 Smed_1702 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327373.1 1780799 R 366394 CDS YP_001327374.1 150396907 5322561 complement(1782209..1782346) 1 NC_009636.1 hypothetical protein 1782346 5322561 Smed_1703 Sinorhizobium medicae WSM419 hypothetical protein YP_001327374.1 1782209 R 366394 CDS YP_001327375.1 150396908 5322563 complement(1783203..1784003) 1 NC_009636.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00081 probable insertion sequence ATP-binding protein, IS21 family; IstB ATP binding domain-containing protein 1784003 5322563 Smed_1705 Sinorhizobium medicae WSM419 IstB ATP binding domain-containing protein YP_001327375.1 1783203 R 366394 CDS YP_001327376.1 150396909 5322564 complement(1784003..1785292) 1 NC_009636.1 PFAM: Integrase catalytic region; KEGG: bja:bll1940 putative transposase; integrase catalytic subunit 1785292 5322564 Smed_1706 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001327376.1 1784003 R 366394 CDS YP_001327377.1 150396910 5322565 complement(1785786..1786553) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA1110 putative 3-oxoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 1786553 5322565 Smed_1707 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327377.1 1785786 R 366394 CDS YP_001327378.1 150396911 5322566 1786655..1787290 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rsp:RSP_3893 transcriptional regulator, GntR family; GntR family transcriptional regulator 1787290 5322566 Smed_1708 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001327378.1 1786655 D 366394 CDS YP_001327379.1 150396912 5322567 complement(1787374..1787778) 1 NC_009636.1 KEGG: sme:SMc04246 hypothetical transmembrane signal peptide protein; putative transmembrane signal peptide protein 1787778 5322567 Smed_1709 Sinorhizobium medicae WSM419 putative transmembrane signal peptide protein YP_001327379.1 1787374 R 366394 CDS YP_001327380.1 150396913 5322568 complement(1787907..1789532) 1 NC_009636.1 PFAM: glycoside hydrolase family 43; KEGG: sme:SMc04247 putative beta-xylosidase protein; alpha-N-arabinofuranosidase 1789532 5322568 Smed_1710 Sinorhizobium medicae WSM419 alpha-N-arabinofuranosidase YP_001327380.1 1787907 R 366394 CDS YP_001327381.1 150396914 5322569 1789875..1790450 1 NC_009636.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMc04248 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 1790450 5322569 Smed_1711 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001327381.1 1789875 D 366394 CDS YP_001327382.1 150396915 5322570 1790447..1792237 1 NC_009636.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMc04249 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 1792237 5322570 Smed_1712 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001327382.1 1790447 D 366394 CDS YP_001327383.1 150396916 5322571 complement(1792392..1793690) 1 NC_009636.1 PFAM: histidinol dehydrogenase; KEGG: reh:H16_A1694 histidinol dehydrogenase; histidinol dehydrogenase 1793690 5322571 Smed_1713 Sinorhizobium medicae WSM419 histidinol dehydrogenase YP_001327383.1 1792392 R 366394 CDS YP_001327384.1 150396917 5322572 1793871..1794419 1 NC_009636.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: csa:Csal_2087 transcriptional regulator, XRE family with cupin sensor protein; XRE family transcriptional regulator 1794419 5322572 Smed_1714 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001327384.1 1793871 D 366394 CDS YP_001327385.1 150396918 5322573 1794538..1795578 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0855 hypothetical spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; extracellular solute-binding protein 1795578 5322573 Smed_1715 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327385.1 1794538 D 366394 CDS YP_001327386.1 150396919 5322574 1795675..1796742 1 NC_009636.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0854 hypothetical spermidine/putrescine ABC transporter, ATP-binding protein; spermidine/putrescine ABC transporter ATPase 1796742 5322574 Smed_1716 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase YP_001327386.1 1795675 D 366394 CDS YP_001327387.1 150396920 5322575 1796739..1797920 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0328 spermidine/putrescine ABC transporter, permease protein, putative; binding-protein-dependent transport system inner membrane protein 1797920 5322575 Smed_1717 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327387.1 1796739 D 366394 CDS YP_001327388.1 150396921 5322576 1797917..1798702 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1751 putative ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1798702 5322576 Smed_1718 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327388.1 1797917 D 366394 CDS YP_001327389.1 150396922 5322577 complement(1798777..1799883) 1 NC_009636.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMc04251 putative mannitol-binding periplasmic signal peptide protein; TRAP dicarboxylate transporter subunit DctP 1799883 5322577 Smed_1719 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001327389.1 1798777 R 366394 CDS YP_001327390.1 150396923 5322578 complement(1799925..1800047) 1 NC_009636.1 hypothetical protein 1800047 5322578 Smed_1720 Sinorhizobium medicae WSM419 hypothetical protein YP_001327390.1 1799925 R 366394 CDS YP_001327391.1 150396924 5322579 complement(1800176..1801204) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc04252 putative oxidoreductase protein; aldo/keto reductase 1801204 5322579 Smed_1721 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001327391.1 1800176 R 366394 CDS YP_001327392.1 150396925 5322580 complement(1801292..1802425) 1 NC_009636.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; homoserine dehydrogenase NAD-binding; KEGG: sme:SMc04253 putative oxidoreductase protein; oxidoreductase domain-containing protein 1802425 5322580 Smed_1722 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001327392.1 1801292 R 366394 CDS YP_001327393.1 150396926 5322581 complement(1802441..1803202) 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc04254 hypothetical protein; xylose isomerase domain-containing protein 1803202 5322581 Smed_1723 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001327393.1 1802441 R 366394 CDS YP_001327394.1 150396927 5322582 complement(1803252..1805726) 1 NC_009636.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sme:SMc04255 putative beta-mannosidase protein; beta-mannosidase 1805726 5322582 Smed_1724 Sinorhizobium medicae WSM419 beta-mannosidase YP_001327394.1 1803252 R 366394 CDS YP_001327395.1 150396928 5322583 complement(1805817..1806902) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04256 putative ATP-binding ABC transporter protein; ABC transporter-like protein 1806902 5322583 Smed_1725 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327395.1 1805817 R 366394 CDS YP_001327396.1 150396929 5322584 complement(1806909..1807850) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04257 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1807850 5322584 Smed_1726 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327396.1 1806909 R 366394 CDS YP_001327397.1 150396930 5322585 complement(1807843..1808751) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04258 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1808751 5322585 Smed_1727 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327397.1 1807843 R 366394 CDS YP_001327398.1 150396931 5322586 complement(1808944..1810179) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04259 putative periplasmic binding ABC transporter signal peptide protein; extracellular solute-binding protein 1810179 5322586 Smed_1728 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327398.1 1808944 R 366394 CDS YP_001327399.1 150396932 5322587 1810284..1810538 1 NC_009636.1 hypothetical protein 1810538 5322587 Smed_1729 Sinorhizobium medicae WSM419 hypothetical protein YP_001327399.1 1810284 D 366394 CDS YP_001327400.1 150396933 5322588 1810668..1811729 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMc04260 putative transcription regulator protein; periplasmic binding protein/LacI transcriptional regulator 1811729 5322588 Smed_1730 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001327400.1 1810668 D 366394 CDS YP_001327401.1 150396934 5322589 complement(1811793..1812056) 1 NC_009636.1 KEGG: sme:SMc04261 hypothetical protein; hypothetical protein 1812056 5322589 Smed_1731 Sinorhizobium medicae WSM419 hypothetical protein YP_001327401.1 1811793 R 366394 CDS YP_001327402.1 150396935 5322590 complement(1812163..1813593) 1 NC_009636.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1813593 5322590 Smed_1732 Sinorhizobium medicae WSM419 6-phosphogluconate dehydrogenase YP_001327402.1 1812163 R 366394 CDS YP_001327403.1 150396936 5322591 1813960..1814877 1 NC_009636.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc04264 putative transcription regulator protein; helix-turn-helix domain-containing protein 1814877 5322591 Smed_1733 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001327403.1 1813960 D 366394 CDS YP_001327404.1 150396937 5322592 1814996..1815442 1 NC_009636.1 KEGG: sme:SMc04265 hypothetical protein; hypothetical protein 1815442 5322592 Smed_1734 Sinorhizobium medicae WSM419 hypothetical protein YP_001327404.1 1814996 D 366394 CDS YP_001327405.1 150396938 5322593 1815423..1815776 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc04266 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1815776 5322593 Smed_1735 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001327405.1 1815423 D 366394 CDS YP_001327406.1 150396939 5322594 complement(1816048..1816971) 1 NC_009636.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1816971 5322594 Smed_1736 Sinorhizobium medicae WSM419 lipid A biosynthesis lauroyl acyltransferase YP_001327406.1 1816048 R 366394 CDS YP_001327407.1 150396940 5322595 complement(1816982..1818010) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc04270 putative dehydrogenase protein; alcohol dehydrogenase 1818010 5322595 Smed_1737 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001327407.1 1816982 R 366394 CDS YP_001327408.1 150396941 5322596 complement(1818054..1819337) 1 NC_009636.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 1819337 5322596 Smed_1738 Sinorhizobium medicae WSM419 3-oxoacyl-(acyl carrier protein) synthase II YP_001327408.1 1818054 R 366394 CDS YP_001327409.1 150396942 5322597 complement(1819350..1820552) 1 NC_009636.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1820552 5322597 Smed_1739 Sinorhizobium medicae WSM419 3-oxoacyl-(acyl carrier protein) synthase II YP_001327409.1 1819350 R 366394 CDS YP_001327410.1 150396943 5322598 complement(1820555..1821031) 1 NC_009636.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sme:SMc04277 putative (3R)-hydroxymyristoyl-[acyl carrier] dehydratase transmembrane protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1821031 5322598 Smed_1740 Sinorhizobium medicae WSM419 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001327410.1 1820555 R 366394 CDS YP_001327411.1 150396944 5322599 complement(1821248..1821535) 1 NC_009636.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1821535 5322599 Smed_1741 Sinorhizobium medicae WSM419 acyl carrier protein YP_001327411.1 1821248 R 366394 CDS YP_001327412.1 150396945 5322600 1822067..1822795 1 NC_009636.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: atc:AGR_C_2948 probable transcriptional activator (ORF-240); CRP/FNR family transcriptional regulator 1822795 5322600 Smed_1742 Sinorhizobium medicae WSM419 CRP/FNR family transcriptional regulator YP_001327412.1 1822067 D 366394 CDS YP_001327413.1 150396946 5322601 complement(1822851..1823804) 1 NC_009636.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1823804 cobD 5322601 cobD Sinorhizobium medicae WSM419 cobalamin biosynthesis protein YP_001327413.1 1822851 R 366394 CDS YP_001327414.1 150396947 5322602 complement(1823835..1824836) 1 NC_009636.1 PFAM: aminotransferase class I and II; KEGG: sme:SMc04281 probable cobalamin biosynthesis protein pyridoxal-phosphate-dependent aminotransferase; class I and II aminotransferase 1824836 5322602 Smed_1744 Sinorhizobium medicae WSM419 class I and II aminotransferase YP_001327414.1 1823835 R 366394 CDS YP_001327415.1 150396948 5322603 complement(1824839..1826128) 1 NC_009636.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1826128 5322603 Smed_1745 Sinorhizobium medicae WSM419 cobyrinic acid a,c-diamide synthase YP_001327415.1 1824839 R 366394 CDS YP_001327416.1 150396949 5322604 complement(1826125..1826964) 1 NC_009636.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMc04284 probable uroporphyrin-III C-methyltransferase protein; uroporphyrin-III C-methyltransferase 1826964 5322604 Smed_1746 Sinorhizobium medicae WSM419 uroporphyrin-III C-methyltransferase YP_001327416.1 1826125 R 366394 CDS YP_001327417.1 150396950 5322605 complement(1827095..1827532) 1 NC_009636.1 KEGG: sme:SMc04285 probable cobalamin biosynthesis protein; putative cobalamin biosynthesis protein 1827532 5322605 Smed_1747 Sinorhizobium medicae WSM419 putative cobalamin biosynthesis protein YP_001327417.1 1827095 R 366394 CDS YP_001327418.1 150396951 5322606 1827860..1828645 1 NC_009636.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMc04286 hypothetical transmembrane protein; hypothetical protein 1828645 5322606 Smed_1748 Sinorhizobium medicae WSM419 hypothetical protein YP_001327418.1 1827860 D 366394 CDS YP_001327419.1 150396952 5322607 complement(1828694..1830493) 1 NC_009636.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc04288 putative peptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 1830493 5322607 Smed_1749 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327419.1 1828694 R 366394 CDS YP_001327420.1 150396953 5322608 complement(1830537..1831481) 1 NC_009636.1 PFAM: Acetamidase/Formamidase; KEGG: sme:SMc04290 hypothetical protein; acetamidase/formamidase 1831481 5322608 Smed_1750 Sinorhizobium medicae WSM419 acetamidase/formamidase YP_001327420.1 1830537 R 366394 CDS YP_001327421.1 150396954 5322609 complement(1831471..1833087) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc04293 putative peptide-binding periplasmic ABC transporter protein; extracellular solute-binding protein 1833087 5322609 Smed_1751 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327421.1 1831471 R 366394 CDS YP_001327422.1 150396955 5322610 complement(1833128..1834048) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04294 putative peptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1834048 5322610 Smed_1752 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327422.1 1833128 R 366394 CDS YP_001327423.1 150396956 5322611 complement(1834048..1834890) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04295 putative peptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1834890 5322611 Smed_1753 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327423.1 1834048 R 366394 CDS YP_001327424.1 150396957 5322612 complement(1834925..1835539) 1 NC_009636.1 PFAM: ANTAR domain protein; KEGG: sme:SMc04297 putative transcription regulator protein; response regulator receiver/ANTAR domain-containing protein 1835539 5322612 Smed_1754 Sinorhizobium medicae WSM419 response regulator receiver/ANTAR domain-containing protein YP_001327424.1 1834925 R 366394 CDS YP_001327425.1 150396958 5322613 complement(1835536..1836702) 1 NC_009636.1 KEGG: sme:SMc04301 putative regulator protein; putative regulator protein 1836702 5322613 Smed_1755 Sinorhizobium medicae WSM419 putative regulator protein YP_001327425.1 1835536 R 366394 CDS YP_001327426.1 150396959 5322614 1836977..1837150 1 NC_009636.1 KEGG: rpe:RPE_3246 PilT protein domain protein; hypothetical protein 1837150 5322614 Smed_1756 Sinorhizobium medicae WSM419 hypothetical protein YP_001327426.1 1836977 D 366394 CDS YP_001327427.1 150396960 5322615 complement(1837198..1837623) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: atc:AGR_L_3039 hypothetical protein; hypothetical protein 1837623 5322615 Smed_1757 Sinorhizobium medicae WSM419 hypothetical protein YP_001327427.1 1837198 R 366394 CDS YP_001327428.1 150396961 5322616 complement(1837623..1838267) 1 NC_009636.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 1838267 5322616 Smed_1758 Sinorhizobium medicae WSM419 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001327428.1 1837623 R 366394 CDS YP_001327429.1 150396962 5322617 complement(1838278..1842099) 1 NC_009636.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 1842099 cobN 5322617 cobN Sinorhizobium medicae WSM419 cobaltochelatase subunit CobN YP_001327429.1 1838278 R 366394 CDS YP_001327430.1 150396963 5322618 complement(1842139..1843203) 1 NC_009636.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sme:SMc04304 probable cobalamine biosynthesis protein; cobalamin biosynthesis protein CobW 1843203 5322618 Smed_1760 Sinorhizobium medicae WSM419 cobalamin biosynthesis protein CobW YP_001327430.1 1842139 R 366394 CDS YP_001327431.1 150396964 5322619 complement(1843207..1843734) 1 NC_009636.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1843734 cobU 5322619 cobU Sinorhizobium medicae WSM419 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_001327431.1 1843207 R 366394 CDS YP_001327432.1 150396965 5322620 1844498..1845382 1 NC_009636.1 KEGG: sme:SMc04306 hypothetical protein; hypothetical protein 1845382 5322620 Smed_1762 Sinorhizobium medicae WSM419 hypothetical protein YP_001327432.1 1844498 D 366394 CDS YP_001327433.1 150396966 5322621 complement(1845410..1847587) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: sme:SMc04307 putative adenylate/guanylate cyclase transmembrane protein; putative Chase2 sensor protein 1847587 5322621 Smed_1763 Sinorhizobium medicae WSM419 putative Chase2 sensor protein YP_001327433.1 1845410 R 366394 CDS YP_001327434.1 150396967 5322622 complement(1847812..1848627) 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc04308 putative oxidoreductase protein; alpha/beta hydrolase fold protein 1848627 5322622 Smed_1764 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001327434.1 1847812 R 366394 CDS YP_001327435.1 150396968 5322623 complement(1848719..1850173) 1 NC_009636.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1850173 5322623 Smed_1765 Sinorhizobium medicae WSM419 cobyric acid synthase YP_001327435.1 1848719 R 366394 CDS YP_001327436.1 150396969 5322624 1850419..1850562 1 NC_009636.1 KEGG: sme:SMc04310 hypothetical protein; hypothetical protein 1850562 5322624 Smed_1766 Sinorhizobium medicae WSM419 hypothetical protein YP_001327436.1 1850419 D 366394 CDS YP_001327437.1 150396970 5322625 1851013..1852011 1 NC_009636.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMc04311 hypothetical transmembrane protein; glycine betaine ABC transporter substrate-binding protein 1852011 5322625 Smed_1767 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001327437.1 1851013 D 366394 CDS YP_001327438.1 150396971 5322626 1852183..1853229 1 NC_009636.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04439 putative glycine betaine transport ATP-binding ABC transporter protein; glycine betaine/L-proline ABC transporter ATPase 1853229 5322626 Smed_1768 Sinorhizobium medicae WSM419 glycine betaine/L-proline ABC transporter ATPase YP_001327438.1 1852183 D 366394 CDS YP_001327439.1 150396972 5322627 complement(1853294..1853701) 1 NC_009636.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: sme:SMc04314 hypothetical protein; 4-oxalocrotonate tautomerase 1853701 5322627 Smed_1769 Sinorhizobium medicae WSM419 4-oxalocrotonate tautomerase YP_001327439.1 1853294 R 366394 CDS YP_001327440.1 150396973 5322628 1853804..1854685 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04315 putative transcription regulator protein; LysR family transcriptional regulator 1854685 5322628 Smed_1770 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327440.1 1853804 D 366394 CDS YP_001327441.1 150396974 5322629 1854761..1855774 1 NC_009636.1 catalyzes the formation of methionine from L-homocysteine and S-adenosyl-L-methionine; methionine synthase I 1855774 5322629 Smed_1771 Sinorhizobium medicae WSM419 methionine synthase I YP_001327441.1 1854761 D 366394 CDS YP_001327442.1 150396975 5322630 complement(1855817..1857868) 1 NC_009636.1 PFAM: acyltransferase 3; KEGG: rde:RD1_B0055 acyltransferase family protein; acyltransferase 3 1857868 5322630 Smed_1772 Sinorhizobium medicae WSM419 acyltransferase 3 YP_001327442.1 1855817 R 366394 CDS YP_001327443.1 150396976 5322631 complement(1858023..1858775) 1 NC_009636.1 KEGG: sme:SMc04328 hypothetical lipoprotein signal peptide; lipoprotein signal peptide 1858775 5322631 Smed_1773 Sinorhizobium medicae WSM419 lipoprotein signal peptide YP_001327443.1 1858023 R 366394 CDS YP_001327444.1 150396977 5322632 complement(1858856..1859560) 1 NC_009636.1 KEGG: sme:SMc04329 hypothetical protein; hypothetical protein 1859560 5322632 Smed_1774 Sinorhizobium medicae WSM419 hypothetical protein YP_001327444.1 1858856 R 366394 CDS YP_001327445.1 150396978 5322633 complement(1859668..1861239) 1 NC_009636.1 PFAM: trimethylamine methyltransferase; KEGG: sme:SMc04330 putative trimethylamine methyltransferase protein; trimethylamine methyltransferase 1861239 5322633 Smed_1775 Sinorhizobium medicae WSM419 trimethylamine methyltransferase YP_001327445.1 1859668 R 366394 CDS YP_001327446.1 150396979 5322634 1861761..1862459 1 NC_009636.1 PFAM: Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: sme:SMc04331 putative dimethylamine corrinoid protein; methionine synthase 1862459 5322634 Smed_1776 Sinorhizobium medicae WSM419 methionine synthase YP_001327446.1 1861761 D 366394 CDS YP_001327447.1 150396980 5322635 1862764..1863384 1 NC_009636.1 KEGG: sme:SMc04333 hypothetical protein; hypothetical protein 1863384 5322635 Smed_1777 Sinorhizobium medicae WSM419 hypothetical protein YP_001327447.1 1862764 D 366394 CDS YP_001327448.1 150396981 5322636 complement(1863405..1863557) 1 NC_009636.1 PFAM: Entericidin EcnAB; KEGG: ret:RHE_CH02170 hypothetical protein; entericidin EcnAB 1863557 5322636 Smed_1778 Sinorhizobium medicae WSM419 entericidin EcnAB YP_001327448.1 1863405 R 366394 CDS YP_001327449.1 150396982 5322637 1863804..1863983 1 NC_009636.1 KEGG: sme:SMc04335 hypothetical lipoprotein transmembrane; lipoprotein transmembrane 1863983 5322637 Smed_1779 Sinorhizobium medicae WSM419 lipoprotein transmembrane YP_001327449.1 1863804 D 366394 CDS YP_001327450.1 150396983 5322638 complement(1864052..1864522) 1 NC_009636.1 PFAM: BA14K family protein; KEGG: sme:SMc04336 hypothetical transmembrane signal peptide protein; BA14K family protein 1864522 5322638 Smed_1780 Sinorhizobium medicae WSM419 BA14K family protein YP_001327450.1 1864052 R 366394 CDS YP_001327451.1 150396984 5322639 1864921..1865223 1 NC_009636.1 KEGG: sme:SMc04337 hypothetical protein; hypothetical protein 1865223 5322639 Smed_1781 Sinorhizobium medicae WSM419 hypothetical protein YP_001327451.1 1864921 D 366394 CDS YP_001327452.1 150396985 5322640 1865216..1865803 1 NC_009636.1 KEGG: sme:SMc04339 hypothetical protein; hypothetical protein 1865803 5322640 Smed_1782 Sinorhizobium medicae WSM419 hypothetical protein YP_001327452.1 1865216 D 366394 CDS YP_001327453.1 150396986 5322641 1865800..1866903 1 NC_009636.1 PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc04340 putative oxidoreductase protein; methylenetetrahydrofolate reductase 1866903 5322641 Smed_1783 Sinorhizobium medicae WSM419 methylenetetrahydrofolate reductase YP_001327453.1 1865800 D 366394 CDS YP_001327454.1 150396987 5322642 1867049..1868008 1 NC_009636.1 catalyzes the transfer of the N5-methyl group from (6S)-methyl tetrahydrofolate to the cobalt center of a corrinoid iron-sulfur protein; methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 1868008 5322642 Smed_1784 Sinorhizobium medicae WSM419 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase YP_001327454.1 1867049 D 366394 CDS YP_001327455.1 150396988 5322643 1868010..1868348 1 NC_009636.1 KEGG: sme:SMc04345 hypothetical protein; hypothetical protein 1868348 5322643 Smed_1785 Sinorhizobium medicae WSM419 hypothetical protein YP_001327455.1 1868010 D 366394 CDS YP_001327456.1 150396989 5322644 1868368..1870419 1 NC_009636.1 PFAM: ferredoxin; KEGG: sme:SMc04347 hypothetical protein; ferredoxin 1870419 5322644 Smed_1786 Sinorhizobium medicae WSM419 ferredoxin YP_001327456.1 1868368 D 366394 CDS YP_001327457.1 150396990 5322645 1870513..1871175 1 NC_009636.1 PFAM: Chloramphenicol phosphotransferase family protein; KEGG: sme:SMc04451 putative chloramphenicol phosphotransferase protein; chloramphenicol phosphotransferase family protein 1871175 5322645 Smed_1787 Sinorhizobium medicae WSM419 chloramphenicol phosphotransferase family protein YP_001327457.1 1870513 D 366394 CDS YP_001327458.1 150396991 5322646 complement(1871206..1872102) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04163 putative transcription regulator protein; LysR family transcriptional regulator 1872102 5322646 Smed_1788 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327458.1 1871206 R 366394 CDS YP_001327459.1 150396992 5322647 1872678..1872878 1 NC_009636.1 KEGG: sme:SMc04164 hypothetical protein; hypothetical protein 1872878 5322647 Smed_1789 Sinorhizobium medicae WSM419 hypothetical protein YP_001327459.1 1872678 D 366394 CDS YP_001327460.1 150396993 5322648 complement(1872998..1873861) 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc04165 putative oxidoreductase protein; alpha/beta hydrolase fold protein 1873861 5322648 Smed_1790 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001327460.1 1872998 R 366394 CDS YP_001327461.1 150396994 5322649 1874077..1874676 1 NC_009636.1 KEGG: sme:SMc04166 hypothetical protein; hypothetical protein 1874676 5322649 Smed_1791 Sinorhizobium medicae WSM419 hypothetical protein YP_001327461.1 1874077 D 366394 CDS YP_001327462.1 150396995 5322650 complement(1874699..1875670) 1 NC_009636.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc04167 putative histidine-rich transporter transmembrane protein; cation diffusion facilitator family transporter 1875670 5322650 Smed_1792 Sinorhizobium medicae WSM419 cation diffusion facilitator family transporter YP_001327462.1 1874699 R 366394 CDS YP_001327463.1 150396996 5322651 complement(1875667..1875939) 1 NC_009636.1 PFAM: protein of unknown function DUF156; KEGG: sme:SMc04168 hypothetical protein; hypothetical protein 1875939 5322651 Smed_1793 Sinorhizobium medicae WSM419 hypothetical protein YP_001327463.1 1875667 R 366394 CDS YP_001327464.1 150396997 5322652 1876418..1877434 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc04169 putative transcription regulator protein; AraC family transcriptional regulator 1877434 5322652 Smed_1794 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001327464.1 1876418 D 366394 CDS YP_001327465.1 150396998 5322653 complement(1877988..1878812) 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc04170 putative two 2-component receiver domains protein; response regulator receiver protein 1878812 5322653 Smed_1795 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001327465.1 1877988 R 366394 CDS YP_001327466.1 150396999 5322654 complement(1878987..1880600) 1 NC_009636.1 PFAM: Hemolysin-type calcium-binding region; KEGG: sme:SMc04171 putative hemolysin-type calcium-binding protein; hemolysin-type calcium-binding protein 1880600 5322654 Smed_1796 Sinorhizobium medicae WSM419 hemolysin-type calcium-binding protein YP_001327466.1 1878987 R 366394 CDS YP_001327467.1 150397000 5322655 1880912..1881571 1 NC_009636.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: sme:SMc04173 hypothetical protein; deaminase-reductase domain-containing protein 1881571 5322655 Smed_1797 Sinorhizobium medicae WSM419 deaminase-reductase domain-containing protein YP_001327467.1 1880912 D 366394 CDS YP_001327468.1 150397001 5322656 complement(1881683..1881946) 1 NC_009636.1 KEGG: sme:SMc04174 hypothetical signal peptide protein; putative signal peptide protein 1881946 5322656 Smed_1798 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327468.1 1881683 R 366394 CDS YP_001327469.1 150397002 5322657 1882263..1882901 1 NC_009636.1 PFAM: Integral membrane protein TerC; KEGG: sme:SMc04175 putative transmembrane protein; integral membrane protein TerC 1882901 5322657 Smed_1799 Sinorhizobium medicae WSM419 integral membrane protein TerC YP_001327469.1 1882263 D 366394 CDS YP_001327470.1 150397003 5322658 complement(1883047..1885626) 1 NC_009636.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMc04176 putative transmembrane protein; mechanosensitive ion channel protein MscS 1885626 5322658 Smed_1800 Sinorhizobium medicae WSM419 mechanosensitive ion channel protein MscS YP_001327470.1 1883047 R 366394 CDS YP_001327471.1 150397004 5322659 complement(1885756..1886217) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc04177 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1886217 5322659 Smed_1801 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001327471.1 1885756 R 366394 CDS YP_001327472.1 150397005 5322660 complement(1886411..1886974) 1 NC_009636.1 PFAM: protein of unknown function DUF924; KEGG: sme:SMc04178 hypothetical protein; hypothetical protein 1886974 5322660 Smed_1802 Sinorhizobium medicae WSM419 hypothetical protein YP_001327472.1 1886411 R 366394 CDS YP_001327473.1 150397006 5322661 complement(1887117..1888892) 1 NC_009636.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: sme:SMc04179 putative transmembrane protein; TrkA domain-containing protein 1888892 5322661 Smed_1803 Sinorhizobium medicae WSM419 TrkA domain-containing protein YP_001327473.1 1887117 R 366394 CDS YP_001327474.1 150397007 5322662 1889425..1889706 1 NC_009636.1 KEGG: sme:SMc04180 putative transmembrane protein; putative transmembrane protein 1889706 5322662 Smed_1804 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327474.1 1889425 D 366394 CDS YP_001327475.1 150397008 5322663 1889744..1890028 1 NC_009636.1 KEGG: sme:SMc04181 putative transmembrane protein; putative transmembrane protein 1890028 5322663 Smed_1805 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327475.1 1889744 D 366394 CDS YP_001327476.1 150397009 5322664 complement(1890139..1890477) 1 NC_009636.1 KEGG: sme:SMc04182 hypothetical protein; hypothetical protein 1890477 5322664 Smed_1806 Sinorhizobium medicae WSM419 hypothetical protein YP_001327476.1 1890139 R 366394 CDS YP_001327477.1 150397010 5322665 complement(1890470..1890763) 1 NC_009636.1 KEGG: sme:SMb20921 hypothetical protein; hypothetical protein 1890763 5322665 Smed_1807 Sinorhizobium medicae WSM419 hypothetical protein YP_001327477.1 1890470 R 366394 CDS YP_001327478.1 150397011 5322666 complement(1890841..1891650) 1 NC_009636.1 KEGG: sme:SMc04183 putative transmembrane protein; putative transmembrane protein 1891650 5322666 Smed_1808 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327478.1 1890841 R 366394 CDS YP_001327479.1 150397012 5322667 complement(1892013..1892714) 1 NC_009636.1 TIGRFAM: methyltransferase FkbM family; KEGG: rpd:RPD_2545 methyltransferase FkbM; FkbM family methyltransferase 1892714 5322667 Smed_1809 Sinorhizobium medicae WSM419 FkbM family methyltransferase YP_001327479.1 1892013 R 366394 CDS YP_001327480.1 150397013 5322668 complement(1892794..1893345) 1 NC_009636.1 KEGG: gvi:gll2178 hypothetical protein; hypothetical protein 1893345 5322668 Smed_1810 Sinorhizobium medicae WSM419 hypothetical protein YP_001327480.1 1892794 R 366394 CDS YP_001327481.1 150397014 5322669 complement(1893332..1893493) 1 NC_009636.1 hypothetical protein 1893493 5322669 Smed_1811 Sinorhizobium medicae WSM419 hypothetical protein YP_001327481.1 1893332 R 366394 CDS YP_001327482.1 150397015 5322670 1893940..1894554 1 NC_009636.1 KEGG: mmr:Mmar10_2764 hypothetical protein; hypothetical protein 1894554 5322670 Smed_1812 Sinorhizobium medicae WSM419 hypothetical protein YP_001327482.1 1893940 D 366394 CDS YP_001327483.1 150397016 5322671 complement(1894543..1895058) 1 NC_009636.1 KEGG: sme:SMc04186 hypothetical protein; hypothetical protein 1895058 5322671 Smed_1813 Sinorhizobium medicae WSM419 hypothetical protein YP_001327483.1 1894543 R 366394 CDS YP_001327484.1 150397017 5322672 complement(1895059..1896558) 1 NC_009636.1 KEGG: mmu:239611 mucin 19; hypothetical protein 1896558 5322672 Smed_1814 Sinorhizobium medicae WSM419 hypothetical protein YP_001327484.1 1895059 R 366394 CDS YP_001327485.1 150397018 5322673 complement(1896639..1897745) 1 NC_009636.1 KEGG: mes:Meso_0238 hypothetical protein; hypothetical protein 1897745 5322673 Smed_1815 Sinorhizobium medicae WSM419 hypothetical protein YP_001327485.1 1896639 R 366394 CDS YP_001327486.1 150397019 5322674 complement(1897745..1898098) 1 NC_009636.1 hypothetical protein 1898098 5322674 Smed_1816 Sinorhizobium medicae WSM419 hypothetical protein YP_001327486.1 1897745 R 366394 CDS YP_001327487.1 150397020 5322675 complement(1898095..1899693) 1 NC_009636.1 KEGG: mlo:mll0449 hypothetical protein; hypothetical protein 1899693 5322675 Smed_1817 Sinorhizobium medicae WSM419 hypothetical protein YP_001327487.1 1898095 R 366394 CDS YP_001327488.1 150397021 5322676 complement(1899697..1900158) 1 NC_009636.1 hypothetical protein 1900158 5322676 Smed_1818 Sinorhizobium medicae WSM419 hypothetical protein YP_001327488.1 1899697 R 366394 CDS YP_001327489.1 150397022 5322677 complement(1900158..1901774) 1 NC_009636.1 KEGG: mlo:mll0452 hypothetical protein; hypothetical protein 1901774 5322677 Smed_1819 Sinorhizobium medicae WSM419 hypothetical protein YP_001327489.1 1900158 R 366394 CDS YP_001327490.1 150397023 5322678 complement(1901771..1902373) 1 NC_009636.1 KEGG: mes:Meso_0233 hypothetical protein; hypothetical protein 1902373 5322678 Smed_1820 Sinorhizobium medicae WSM419 hypothetical protein YP_001327490.1 1901771 R 366394 CDS YP_001327491.1 150397024 5322679 complement(1902370..1903731) 1 NC_009636.1 hypothetical protein 1903731 5322679 Smed_1821 Sinorhizobium medicae WSM419 hypothetical protein YP_001327491.1 1902370 R 366394 CDS YP_001327492.1 150397025 5322680 complement(1903728..1904330) 1 NC_009636.1 KEGG: zmo:ZMO0389 constituent protein; hypothetical protein 1904330 5322680 Smed_1822 Sinorhizobium medicae WSM419 hypothetical protein YP_001327492.1 1903728 R 366394 CDS YP_001327493.1 150397026 5322681 complement(1904327..1904650) 1 NC_009636.1 hypothetical protein 1904650 5322681 Smed_1823 Sinorhizobium medicae WSM419 hypothetical protein YP_001327493.1 1904327 R 366394 CDS YP_001327494.1 150397027 5322682 complement(1904647..1905015) 1 NC_009636.1 hypothetical protein 1905015 5322682 Smed_1824 Sinorhizobium medicae WSM419 hypothetical protein YP_001327494.1 1904647 R 366394 CDS YP_001327495.1 150397028 5322683 1905096..1905839 1 NC_009636.1 hypothetical protein 1905839 5322683 Smed_1825 Sinorhizobium medicae WSM419 hypothetical protein YP_001327495.1 1905096 D 366394 CDS YP_001327496.1 150397029 5322684 1906331..1906777 1 NC_009636.1 hypothetical protein 1906777 5322684 Smed_1826 Sinorhizobium medicae WSM419 hypothetical protein YP_001327496.1 1906331 D 366394 CDS YP_001327497.1 150397030 5322685 complement(1906844..1907530) 1 NC_009636.1 hypothetical protein 1907530 5322685 Smed_1827 Sinorhizobium medicae WSM419 hypothetical protein YP_001327497.1 1906844 R 366394 CDS YP_001327498.1 150397031 5322686 complement(1907668..1908327) 1 NC_009636.1 hypothetical protein 1908327 5322686 Smed_1828 Sinorhizobium medicae WSM419 hypothetical protein YP_001327498.1 1907668 R 366394 CDS YP_001327499.1 150397032 5322687 complement(1908615..1909328) 1 NC_009636.1 hypothetical protein 1909328 5322687 Smed_1829 Sinorhizobium medicae WSM419 hypothetical protein YP_001327499.1 1908615 R 366394 CDS YP_001327500.1 150397033 5322688 complement(1909594..1910589) 1 NC_009636.1 KEGG: zmo:ZMO0387 major head protein; hypothetical protein 1910589 5322688 Smed_1830 Sinorhizobium medicae WSM419 hypothetical protein YP_001327500.1 1909594 R 366394 CDS YP_001327501.1 150397034 5322689 complement(1910674..1911642) 1 NC_009636.1 hypothetical protein 1911642 5322689 Smed_1831 Sinorhizobium medicae WSM419 hypothetical protein YP_001327501.1 1910674 R 366394 CDS YP_001327502.1 150397035 5322690 complement(1911767..1912006) 1 NC_009636.1 hypothetical protein 1912006 5322690 Smed_1832 Sinorhizobium medicae WSM419 hypothetical protein YP_001327502.1 1911767 R 366394 CDS YP_001327503.1 150397036 5322691 complement(1912116..1912229) 1 NC_009636.1 hypothetical protein 1912229 5322691 Smed_1833 Sinorhizobium medicae WSM419 hypothetical protein YP_001327503.1 1912116 R 366394 CDS YP_001327504.1 150397037 5322692 complement(1912483..1912914) 1 NC_009636.1 hypothetical protein 1912914 5322692 Smed_1834 Sinorhizobium medicae WSM419 hypothetical protein YP_001327504.1 1912483 R 366394 CDS YP_001327505.1 150397038 5322693 complement(1912911..1913603) 1 NC_009636.1 KEGG: nfa:nfa27910 hypothetical protein; hypothetical protein 1913603 5322693 Smed_1835 Sinorhizobium medicae WSM419 hypothetical protein YP_001327505.1 1912911 R 366394 CDS YP_001327506.1 150397039 5322694 complement(1913678..1914088) 1 NC_009636.1 hypothetical protein 1914088 5322694 Smed_1836 Sinorhizobium medicae WSM419 hypothetical protein YP_001327506.1 1913678 R 366394 CDS YP_001327507.1 150397040 5322695 complement(1914448..1915077) 1 NC_009636.1 hypothetical protein 1915077 5322695 Smed_1837 Sinorhizobium medicae WSM419 hypothetical protein YP_001327507.1 1914448 R 366394 CDS YP_001327508.1 150397041 5322696 complement(1915074..1917125) 1 NC_009636.1 KEGG: zmo:ZMO0380 putative portal protein; hypothetical protein 1917125 5322696 Smed_1838 Sinorhizobium medicae WSM419 hypothetical protein YP_001327508.1 1915074 R 366394 CDS YP_001327509.1 150397042 5322697 complement(1917125..1918558) 1 NC_009636.1 PFAM: protein of unknown function DUF264; KEGG: sme:SMc04187 probable DNA packaging protein GP2; hypothetical protein 1918558 5322697 Smed_1839 Sinorhizobium medicae WSM419 hypothetical protein YP_001327509.1 1917125 R 366394 CDS YP_001327510.1 150397043 5322698 1918701..1919042 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc04188 hypothetical protein; glutathione-dependent formaldehyde-activating protein 1919042 5322698 Smed_1840 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001327510.1 1918701 D 366394 CDS YP_001327511.1 150397044 5322699 complement(1919070..1919225) 1 NC_009636.1 KEGG: sme:SMc04189 hypothetical protein; hypothetical protein 1919225 5322699 Smed_1841 Sinorhizobium medicae WSM419 hypothetical protein YP_001327511.1 1919070 R 366394 CDS YP_001327512.1 150397045 5322700 1919514..1919966 1 NC_009636.1 KEGG: sme:SMc04190 conserved hypothetical signal peptide protein; putative signal peptide protein 1919966 5322700 Smed_1842 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327512.1 1919514 D 366394 CDS YP_001327513.1 150397046 5322701 complement(1919969..1920349) 1 NC_009636.1 KEGG: sme:SMc04191 hypothetical protein; hypothetical protein 1920349 5322701 Smed_1843 Sinorhizobium medicae WSM419 hypothetical protein YP_001327513.1 1919969 R 366394 CDS YP_001327514.1 150397047 5322702 1920524..1920961 1 NC_009636.1 hypothetical protein 1920961 5322702 Smed_1844 Sinorhizobium medicae WSM419 hypothetical protein YP_001327514.1 1920524 D 366394 CDS YP_001327515.1 150397048 5322703 complement(1921133..1921708) 1 NC_009636.1 hypothetical protein 1921708 5322703 Smed_1845 Sinorhizobium medicae WSM419 hypothetical protein YP_001327515.1 1921133 R 366394 CDS YP_001327516.1 150397049 5322704 complement(1922170..1922970) 1 NC_009636.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00081 probable insertion sequence ATP-binding protein, IS21 family; IstB ATP binding domain-containing protein 1922970 5322704 Smed_1846 Sinorhizobium medicae WSM419 IstB ATP binding domain-containing protein YP_001327516.1 1922170 R 366394 CDS YP_001327517.1 150397050 5322705 complement(1922970..1924259) 1 NC_009636.1 PFAM: Integrase catalytic region; KEGG: bja:bll1940 putative transposase; integrase catalytic subunit 1924259 5322705 Smed_1847 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001327517.1 1922970 R 366394 CDS YP_001327518.1 150397051 5322706 1924338..1925270 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 1925270 5322706 Smed_1848 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001327518.1 1924338 D 366394 CDS YP_001327519.1 150397052 5322707 1926154..1926354 1 NC_009636.1 KEGG: sme:SMc04194 putative transmembrane protein; putative transmembrane protein 1926354 5322707 Smed_1849 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327519.1 1926154 D 366394 CDS YP_001327520.1 150397053 5322708 1926367..1926501 1 NC_009636.1 hypothetical protein 1926501 5322708 Smed_1850 Sinorhizobium medicae WSM419 hypothetical protein YP_001327520.1 1926367 D 366394 CDS YP_001327521.1 150397054 5322709 complement(1926722..1927126) 1 NC_009636.1 PFAM: BA14K family protein; KEGG: sme:SMa0639 hypothetical protein; BA14K family protein 1927126 5322709 Smed_1851 Sinorhizobium medicae WSM419 BA14K family protein YP_001327521.1 1926722 R 366394 CDS YP_001327522.1 150397055 5322710 complement(1927331..1927936) 1 NC_009636.1 KEGG: sme:SMc04196 hypothetical protein; hypothetical protein 1927936 5322710 Smed_1852 Sinorhizobium medicae WSM419 hypothetical protein YP_001327522.1 1927331 R 366394 CDS YP_001327523.1 150397056 5322711 complement(1928076..1928591) 1 NC_009636.1 PFAM: Chromosomal replication initiator DnaA domain; KEGG: sme:SMc04197 hypothetical protein; chromosomal replication initiator DnaA domain-containing protein 1928591 5322711 Smed_1853 Sinorhizobium medicae WSM419 chromosomal replication initiator DnaA domain-containing protein YP_001327523.1 1928076 R 366394 CDS YP_001327524.1 150397057 5322712 1928687..1929412 1 NC_009636.1 PFAM: peptidase S24 S26A and S26B; KEGG: sme:SMc04198 putative phage repressor protein; putative phage repressor 1929412 5322712 Smed_1854 Sinorhizobium medicae WSM419 putative phage repressor YP_001327524.1 1928687 D 366394 CDS YP_001327525.1 150397058 5322713 1929631..1929960 1 NC_009636.1 KEGG: sme:SMc04199 hypothetical protein; hypothetical protein 1929960 5322713 Smed_1855 Sinorhizobium medicae WSM419 hypothetical protein YP_001327525.1 1929631 D 366394 CDS YP_001327526.1 150397059 5322714 1929960..1930238 1 NC_009636.1 KEGG: sme:SMc04200 hypothetical signal peptide protein; putative signal peptide protein 1930238 5322714 Smed_1856 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327526.1 1929960 D 366394 CDS YP_001327527.1 150397060 5322715 complement(1930258..1930983) 1 NC_009636.1 PFAM: pentapeptide repeat protein; KEGG: sme:SMc04201 putative signal peptide protein; pentapeptide repeat-containing protein 1930983 5322715 Smed_1857 Sinorhizobium medicae WSM419 pentapeptide repeat-containing protein YP_001327527.1 1930258 R 366394 CDS YP_001327528.1 150397061 5322716 complement(1931196..1932197) 1 NC_009636.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: sme:SMc04202 putative transmembrane protein; import inner membrane translocase subunit Tim44 1932197 5322716 Smed_1858 Sinorhizobium medicae WSM419 import inner membrane translocase subunit Tim44 YP_001327528.1 1931196 R 366394 CDS YP_001327529.1 150397062 5322717 complement(1932386..1933357) 1 NC_009636.1 KEGG: sme:SMc04209 hypothetical protein; hypothetical protein 1933357 5322717 Smed_1859 Sinorhizobium medicae WSM419 hypothetical protein YP_001327529.1 1932386 R 366394 CDS YP_001327530.1 150397063 5322718 complement(1933544..1933939) 1 NC_009636.1 KEGG: sme:SMc04267 hypothetical protein; hypothetical protein 1933939 5322718 Smed_1860 Sinorhizobium medicae WSM419 hypothetical protein YP_001327530.1 1933544 R 366394 CDS YP_001327531.1 150397064 5322720 1934795..1935133 1 NC_009636.1 PFAM: Thioredoxin domain; KEGG: sme:SMc02761 probable thioredoxin protein; thioredoxin domain-containing protein 1935133 5322720 Smed_1862 Sinorhizobium medicae WSM419 thioredoxin domain-containing protein YP_001327531.1 1934795 D 366394 CDS YP_001327532.1 150397065 5322721 1936118..1936855 1 NC_009636.1 PFAM: Necrosis inducing; KEGG: bld:BLi01595 hypothetical protein; necrosis-inducing protein 1936855 5322721 Smed_1863 Sinorhizobium medicae WSM419 necrosis-inducing protein YP_001327532.1 1936118 D 366394 CDS YP_001327533.1 150397066 5322722 1937283..1938443 1 NC_009636.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rba:RB9386 probable FixW protein; alkyl hydroperoxide reductase 1938443 5322722 Smed_1864 Sinorhizobium medicae WSM419 alkyl hydroperoxide reductase YP_001327533.1 1937283 D 366394 CDS YP_001327534.1 150397067 5322723 complement(1939190..1939555) 1 NC_009636.1 KEGG: sme:SMb20920 hypothetical secreted protein; hypothetical protein 1939555 5322723 Smed_1865 Sinorhizobium medicae WSM419 hypothetical protein YP_001327534.1 1939190 R 366394 CDS YP_001327535.1 150397068 5322724 complement(1939781..1940044) 1 NC_009636.1 hypothetical protein 1940044 5322724 Smed_1866 Sinorhizobium medicae WSM419 hypothetical protein YP_001327535.1 1939781 R 366394 CDS YP_001327536.1 150397069 5322725 complement(1940044..1941012) 1 NC_009636.1 KEGG: sme:SMb20518 hypothetical protein; chitinase-like protein 1941012 5322725 Smed_1867 Sinorhizobium medicae WSM419 chitinase-like protein YP_001327536.1 1940044 R 366394 CDS YP_001327537.1 150397070 5322726 1941196..1941414 1 NC_009636.1 KEGG: sme:SMb21395 hypothetical protein; hypothetical protein 1941414 5322726 Smed_1868 Sinorhizobium medicae WSM419 hypothetical protein YP_001327537.1 1941196 D 366394 CDS YP_001327538.1 150397071 5322727 1941627..1941818 1 NC_009636.1 hypothetical protein 1941818 5322727 Smed_1869 Sinorhizobium medicae WSM419 hypothetical protein YP_001327538.1 1941627 D 366394 CDS YP_001327539.1 150397072 5322728 complement(1942098..1942451) 1 NC_009636.1 hypothetical protein 1942451 5322728 Smed_1870 Sinorhizobium medicae WSM419 hypothetical protein YP_001327539.1 1942098 R 366394 CDS YP_001327540.1 150397073 5322729 complement(1942438..1942785) 1 NC_009636.1 KEGG: pen:PSEEN4173 hypothetical protein; hypothetical protein 1942785 5322729 Smed_1871 Sinorhizobium medicae WSM419 hypothetical protein YP_001327540.1 1942438 R 366394 CDS YP_001327541.1 150397074 5322730 complement(1942785..1943909) 1 NC_009636.1 KEGG: pae:PA0643 hypothetical protein; hypothetical protein 1943909 5322730 Smed_1872 Sinorhizobium medicae WSM419 hypothetical protein YP_001327541.1 1942785 R 366394 CDS YP_001327542.1 150397075 5322731 complement(1943921..1945435) 1 NC_009636.1 hypothetical protein 1945435 5322731 Smed_1873 Sinorhizobium medicae WSM419 hypothetical protein YP_001327542.1 1943921 R 366394 CDS YP_001327543.1 150397076 5322732 complement(1945435..1948092) 1 NC_009636.1 KEGG: rsp:RSP_2990 hypothetical protein; hypothetical protein 1948092 5322732 Smed_1874 Sinorhizobium medicae WSM419 hypothetical protein YP_001327543.1 1945435 R 366394 CDS YP_001327544.1 150397077 5322733 complement(1948099..1948503) 1 NC_009636.1 KEGG: aba:Acid345_3157 hypothetical protein; hypothetical protein 1948503 5322733 Smed_1875 Sinorhizobium medicae WSM419 hypothetical protein YP_001327544.1 1948099 R 366394 CDS YP_001327545.1 150397078 5322734 1948572..1948844 1 NC_009636.1 hypothetical protein 1948844 5322734 Smed_1876 Sinorhizobium medicae WSM419 hypothetical protein YP_001327545.1 1948572 D 366394 CDS YP_001327546.1 150397079 5322735 complement(1948991..1949581) 1 NC_009636.1 hypothetical protein 1949581 5322735 Smed_1877 Sinorhizobium medicae WSM419 hypothetical protein YP_001327546.1 1948991 R 366394 CDS YP_001327547.1 150397080 5322736 complement(1949578..1950231) 1 NC_009636.1 hypothetical protein 1950231 5322736 Smed_1878 Sinorhizobium medicae WSM419 hypothetical protein YP_001327547.1 1949578 R 366394 CDS YP_001327548.1 150397081 5322737 1950328..1950687 1 NC_009636.1 hypothetical protein 1950687 5322737 Smed_1879 Sinorhizobium medicae WSM419 hypothetical protein YP_001327548.1 1950328 D 366394 CDS YP_001327549.1 150397082 5322738 complement(1950684..1952780) 1 NC_009636.1 KEGG: mes:Meso_1231 hypothetical protein; hypothetical protein 1952780 5322738 Smed_1880 Sinorhizobium medicae WSM419 hypothetical protein YP_001327549.1 1950684 R 366394 CDS YP_001327550.1 150397083 5322739 1952802..1953236 1 NC_009636.1 hypothetical protein 1953236 5322739 Smed_1881 Sinorhizobium medicae WSM419 hypothetical protein YP_001327550.1 1952802 D 366394 CDS YP_001327551.1 150397084 5322740 complement(1953323..1953559) 1 NC_009636.1 KEGG: mes:Meso_1230 hypothetical protein; hypothetical protein 1953559 5322740 Smed_1882 Sinorhizobium medicae WSM419 hypothetical protein YP_001327551.1 1953323 R 366394 CDS YP_001327552.1 150397085 5322741 complement(1953655..1954056) 1 NC_009636.1 KEGG: mes:Meso_1229 hypothetical protein; hypothetical protein 1954056 5322741 Smed_1883 Sinorhizobium medicae WSM419 hypothetical protein YP_001327552.1 1953655 R 366394 CDS YP_001327553.1 150397086 5322742 complement(1954071..1954556) 1 NC_009636.1 KEGG: mes:Meso_1228 hypothetical protein; hypothetical protein 1954556 5322742 Smed_1884 Sinorhizobium medicae WSM419 hypothetical protein YP_001327553.1 1954071 R 366394 CDS YP_001327554.1 150397087 5322743 complement(1954558..1954983) 1 NC_009636.1 KEGG: mes:Meso_1226 hypothetical protein; hypothetical protein 1954983 5322743 Smed_1885 Sinorhizobium medicae WSM419 hypothetical protein YP_001327554.1 1954558 R 366394 CDS YP_001327555.1 150397088 5322744 complement(1955190..1955636) 1 NC_009636.1 KEGG: mes:Meso_1224 hypothetical protein; hypothetical protein 1955636 5322744 Smed_1886 Sinorhizobium medicae WSM419 hypothetical protein YP_001327555.1 1955190 R 366394 CDS YP_001327556.1 150397089 5322745 complement(1955636..1956673) 1 NC_009636.1 KEGG: mes:Meso_1223 hypothetical protein; hypothetical protein 1956673 5322745 Smed_1887 Sinorhizobium medicae WSM419 hypothetical protein YP_001327556.1 1955636 R 366394 CDS YP_001327557.1 150397090 5322746 complement(1956974..1957339) 1 NC_009636.1 hypothetical protein 1957339 5322746 Smed_1888 Sinorhizobium medicae WSM419 hypothetical protein YP_001327557.1 1956974 R 366394 CDS YP_001327558.1 150397091 5322747 1957419..1957580 1 NC_009636.1 similar to Y20302; KEGG: sme:SMb21028 conserved hypothetical protein, similar to Y20302; hypothetical protein 1957580 5322747 Smed_1889 Sinorhizobium medicae WSM419 hypothetical protein YP_001327558.1 1957419 D 366394 CDS YP_001327559.1 150397092 5322748 complement(1957590..1958084) 1 NC_009636.1 KEGG: mes:Meso_1220 hypothetical protein; hypothetical protein 1958084 5322748 Smed_1890 Sinorhizobium medicae WSM419 hypothetical protein YP_001327559.1 1957590 R 366394 CDS YP_001327560.1 150397093 5322749 complement(1958115..1958570) 1 NC_009636.1 KEGG: mlo:mlr8010 hypothetical protein; hypothetical protein 1958570 5322749 Smed_1891 Sinorhizobium medicae WSM419 hypothetical protein YP_001327560.1 1958115 R 366394 CDS YP_001327561.1 150397094 5322750 complement(1958584..1959537) 1 NC_009636.1 KEGG: mlo:mlr8009 hypothetical protein; hypothetical protein 1959537 5322750 Smed_1892 Sinorhizobium medicae WSM419 hypothetical protein YP_001327561.1 1958584 R 366394 CDS YP_001327562.1 150397095 5322751 complement(1959552..1959989) 1 NC_009636.1 KEGG: mlo:mlr8007 hypothetical protein; hypothetical protein 1959989 5322751 Smed_1893 Sinorhizobium medicae WSM419 hypothetical protein YP_001327562.1 1959552 R 366394 CDS YP_001327563.1 150397096 5322752 complement(1959989..1961131) 1 NC_009636.1 KEGG: mlo:mlr8006 hypothetical protein; hypothetical protein 1961131 5322752 Smed_1894 Sinorhizobium medicae WSM419 hypothetical protein YP_001327563.1 1959989 R 366394 CDS YP_001327564.1 150397097 5322753 complement(1961527..1962903) 1 NC_009636.1 TIGRFAM: phage-associated protein, HI1409 family; KEGG: mlo:mlr8004 hypothetical protein; phage-associated protein 1962903 5322753 Smed_1895 Sinorhizobium medicae WSM419 phage-associated protein YP_001327564.1 1961527 R 366394 CDS YP_001327565.1 150397098 5322754 complement(1962912..1964243) 1 NC_009636.1 PFAM: protein of unknown function DUF264; KEGG: gox:GOX2457 phage DNA Packaging protein; hypothetical protein 1964243 5322754 Smed_1896 Sinorhizobium medicae WSM419 hypothetical protein YP_001327565.1 1962912 R 366394 CDS YP_001327566.1 150397099 5322755 complement(1964247..1964747) 1 NC_009636.1 KEGG: gox:GOX2458 phage terminase small subunit; phage terminase small subunit 1964747 5322755 Smed_1897 Sinorhizobium medicae WSM419 phage terminase small subunit YP_001327566.1 1964247 R 366394 CDS YP_001327567.1 150397100 5322756 1964870..1965241 1 NC_009636.1 hypothetical protein 1965241 5322756 Smed_1898 Sinorhizobium medicae WSM419 hypothetical protein YP_001327567.1 1964870 D 366394 CDS YP_001327568.1 150397101 5322757 complement(1965411..1965566) 1 NC_009636.1 hypothetical protein 1965566 5322757 Smed_1899 Sinorhizobium medicae WSM419 hypothetical protein YP_001327568.1 1965411 R 366394 CDS YP_001327569.1 150397102 5322758 complement(1965953..1966132) 1 NC_009636.1 hypothetical protein 1966132 5322758 Smed_1900 Sinorhizobium medicae WSM419 hypothetical protein YP_001327569.1 1965953 R 366394 CDS YP_001327570.1 150397103 5322759 complement(1966225..1967202) 1 NC_009636.1 hypothetical protein 1967202 5322759 Smed_1901 Sinorhizobium medicae WSM419 hypothetical protein YP_001327570.1 1966225 R 366394 CDS YP_001327571.1 150397104 5322760 complement(1967278..1968174) 1 NC_009636.1 hypothetical protein 1968174 5322760 Smed_1902 Sinorhizobium medicae WSM419 hypothetical protein YP_001327571.1 1967278 R 366394 CDS YP_001327572.1 150397105 5322761 1968516..1968767 1 NC_009636.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: bhe:BH05360 acyl carrier protein; acyl carrier protein 1968767 5322761 Smed_1903 Sinorhizobium medicae WSM419 acyl carrier protein YP_001327572.1 1968516 D 366394 CDS YP_001327573.1 150397106 5322762 complement(1968906..1969523) 1 NC_009636.1 KEGG: sme:SMb20548 hypothetical protein; hypothetical protein 1969523 5322762 Smed_1904 Sinorhizobium medicae WSM419 hypothetical protein YP_001327573.1 1968906 R 366394 CDS YP_001327574.1 150397107 5322763 complement(1969520..1969954) 1 NC_009636.1 PFAM: GcrA cell cycle regulator; GcrA cell cycle regulator 1969954 5322763 Smed_1905 Sinorhizobium medicae WSM419 GcrA cell cycle regulator YP_001327574.1 1969520 R 366394 CDS YP_001327575.1 150397108 5322764 complement(1969951..1970505) 1 NC_009636.1 hypothetical protein 1970505 5322764 Smed_1906 Sinorhizobium medicae WSM419 hypothetical protein YP_001327575.1 1969951 R 366394 CDS YP_001327576.1 150397109 5322765 complement(1970537..1971289) 1 NC_009636.1 hypothetical protein 1971289 5322765 Smed_1907 Sinorhizobium medicae WSM419 hypothetical protein YP_001327576.1 1970537 R 366394 CDS YP_001327577.1 150397110 5322766 complement(1971289..1971669) 1 NC_009636.1 PFAM: protein of unknown function DUF1064; KEGG: lin:lin0099 hypothetical protein; hypothetical protein 1971669 5322766 Smed_1908 Sinorhizobium medicae WSM419 hypothetical protein YP_001327577.1 1971289 R 366394 CDS YP_001327578.1 150397111 5322767 complement(1971666..1971866) 1 NC_009636.1 hypothetical protein 1971866 5322767 Smed_1909 Sinorhizobium medicae WSM419 hypothetical protein YP_001327578.1 1971666 R 366394 CDS YP_001327579.1 150397112 5322768 complement(1971863..1972129) 1 NC_009636.1 hypothetical protein 1972129 5322768 Smed_1910 Sinorhizobium medicae WSM419 hypothetical protein YP_001327579.1 1971863 R 366394 CDS YP_001327580.1 150397113 5322769 complement(1972126..1972773) 1 NC_009636.1 KEGG: rpb:RPB_0521 hypothetical protein; hypothetical protein 1972773 5322769 Smed_1911 Sinorhizobium medicae WSM419 hypothetical protein YP_001327580.1 1972126 R 366394 CDS YP_001327581.1 150397114 5322770 1972866..1973111 1 NC_009636.1 PFAM: protein of unknown function DUF982; KEGG: sme:SMb20546 hypothetical protein; hypothetical protein 1973111 5322770 Smed_1912 Sinorhizobium medicae WSM419 hypothetical protein YP_001327581.1 1972866 D 366394 CDS YP_001327582.1 150397115 5322771 complement(1973114..1973296) 1 NC_009636.1 hypothetical protein 1973296 5322771 Smed_1913 Sinorhizobium medicae WSM419 hypothetical protein YP_001327582.1 1973114 R 366394 CDS YP_001327583.1 150397116 5322772 complement(1973293..1974060) 1 NC_009636.1 KEGG: nar:Saro_2694 hypothetical protein; hypothetical protein 1974060 5322772 Smed_1914 Sinorhizobium medicae WSM419 hypothetical protein YP_001327583.1 1973293 R 366394 CDS YP_001327584.1 150397117 5322773 complement(1974057..1974461) 1 NC_009636.1 KEGG: mes:Meso_0214 hypothetical protein; hypothetical protein 1974461 5322773 Smed_1915 Sinorhizobium medicae WSM419 hypothetical protein YP_001327584.1 1974057 R 366394 CDS YP_001327585.1 150397118 5322774 complement(1975071..1975880) 1 NC_009636.1 KEGG: sme:SMc04009 hypothetical protein; hypothetical protein 1975880 5322774 Smed_1916 Sinorhizobium medicae WSM419 hypothetical protein YP_001327585.1 1975071 R 366394 CDS YP_001327586.1 150397119 5322775 complement(1975877..1976155) 1 NC_009636.1 KEGG: nha:Nham_2404 hypothetical protein; hypothetical protein 1976155 5322775 Smed_1917 Sinorhizobium medicae WSM419 hypothetical protein YP_001327586.1 1975877 R 366394 CDS YP_001327587.1 150397120 5322776 1976224..1976940 1 NC_009636.1 PFAM: peptidase S24 S26A and S26B; KEGG: mlo:mll8500 repressor protein C; putative phage repressor 1976940 5322776 Smed_1918 Sinorhizobium medicae WSM419 putative phage repressor YP_001327587.1 1976224 D 366394 CDS YP_001327588.1 150397121 5322777 1977048..1977281 1 NC_009636.1 hypothetical protein 1977281 5322777 Smed_1919 Sinorhizobium medicae WSM419 hypothetical protein YP_001327588.1 1977048 D 366394 CDS YP_001327589.1 150397122 5322778 1977344..1977973 1 NC_009636.1 KEGG: mlo:mll7982 hypothetical protein; hypothetical protein 1977973 5322778 Smed_1920 Sinorhizobium medicae WSM419 hypothetical protein YP_001327589.1 1977344 D 366394 CDS YP_001327590.1 150397123 5322779 complement(1978160..1978906) 1 NC_009636.1 PFAM: phage Gp37Gp68 family protein; KEGG: mlo:mlr7981 ABC transporter, ATP-binding protein; phage Gp37Gp68 family protein 1978906 5322779 Smed_1921 Sinorhizobium medicae WSM419 phage Gp37Gp68 family protein YP_001327590.1 1978160 R 366394 CDS YP_001327591.1 150397124 5322780 1979155..1979388 1 NC_009636.1 hypothetical protein 1979388 5322780 Smed_1922 Sinorhizobium medicae WSM419 hypothetical protein YP_001327591.1 1979155 D 366394 CDS YP_001327592.1 150397125 5322781 1979385..1979645 1 NC_009636.1 hypothetical protein 1979645 5322781 Smed_1923 Sinorhizobium medicae WSM419 hypothetical protein YP_001327592.1 1979385 D 366394 CDS YP_001327593.1 150397126 5322782 1979881..1980408 1 NC_009636.1 PFAM: siphovirus Gp157 family protein; KEGG: mlo:mll7978 hypothetical protein; siphovirus Gp157 family protein 1980408 5322782 Smed_1924 Sinorhizobium medicae WSM419 siphovirus Gp157 family protein YP_001327593.1 1979881 D 366394 CDS YP_001327594.1 150397127 5322783 1980412..1981419 1 NC_009636.1 TIGRFAM: phage recombination protein Bet; PFAM: RecT protein; KEGG: mlo:mll7977 hypothetical protein; phage recombination protein Bet 1981419 5322783 Smed_1925 Sinorhizobium medicae WSM419 phage recombination protein Bet YP_001327594.1 1980412 D 366394 CDS YP_001327595.1 150397128 5322784 1981421..1981942 1 NC_009636.1 KEGG: sit:TM1040_0782 hypothetical protein; hypothetical protein 1981942 5322784 Smed_1926 Sinorhizobium medicae WSM419 hypothetical protein YP_001327595.1 1981421 D 366394 CDS YP_001327596.1 150397129 5322785 1981939..1982679 1 NC_009636.1 hypothetical protein 1982679 5322785 Smed_1927 Sinorhizobium medicae WSM419 hypothetical protein YP_001327596.1 1981939 D 366394 CDS YP_001327597.1 150397130 5322786 1982676..1983188 1 NC_009636.1 PFAM: protein of unknown function DUF1643; KEGG: sme:SMb20554 hypothetical protein; hypothetical protein 1983188 5322786 Smed_1928 Sinorhizobium medicae WSM419 hypothetical protein YP_001327597.1 1982676 D 366394 CDS YP_001327598.1 150397131 5322787 1983185..1983376 1 NC_009636.1 hypothetical protein 1983376 5322787 Smed_1929 Sinorhizobium medicae WSM419 hypothetical protein YP_001327598.1 1983185 D 366394 CDS YP_001327599.1 150397132 5322788 1983373..1983657 1 NC_009636.1 hypothetical protein 1983657 5322788 Smed_1930 Sinorhizobium medicae WSM419 hypothetical protein YP_001327599.1 1983373 D 366394 CDS YP_001327600.1 150397133 5322789 1983662..1984828 1 NC_009636.1 KEGG: mag:amb2709 integrase; hypothetical protein 1984828 5322789 Smed_1931 Sinorhizobium medicae WSM419 hypothetical protein YP_001327600.1 1983662 D 366394 CDS YP_001327601.1 150397134 5322791 complement(1985080..1985997) 1 NC_009636.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: sme:SMc04271 hypothetical protein; PhzF family phenazine biosynthesis protein 1985997 5322791 Smed_1932 Sinorhizobium medicae WSM419 PhzF family phenazine biosynthesis protein YP_001327601.1 1985080 R 366394 CDS YP_001327602.1 150397135 5322792 complement(1986169..1986918) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc04272 hypothetical protein; NUDIX hydrolase 1986918 5322792 Smed_1933 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001327602.1 1986169 R 366394 CDS YP_001327603.1 150397136 5322793 complement(1986921..1988027) 1 NC_009636.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMc04274 hypothetical protein; endonuclease/exonuclease/phosphatase 1988027 5322793 Smed_1934 Sinorhizobium medicae WSM419 endonuclease/exonuclease/phosphatase YP_001327603.1 1986921 R 366394 CDS YP_001327604.1 150397137 5322794 complement(1988141..1988584) 1 NC_009636.1 KEGG: sme:SMc04276 hypothetical signal peptide protein; putative signal peptide protein 1988584 5322794 Smed_1935 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327604.1 1988141 R 366394 CDS YP_001327605.1 150397138 5322795 complement(1988598..1988966) 1 NC_009636.1 hypothetical protein 1988966 5322795 Smed_1936 Sinorhizobium medicae WSM419 hypothetical protein YP_001327605.1 1988598 R 366394 CDS YP_001327606.1 150397139 5322796 complement(1989343..1989456) 1 NC_009636.1 KEGG: sme:SMc04280 hypothetical signal peptide protein; putative signal peptide protein 1989456 5322796 Smed_1937 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327606.1 1989343 R 366394 CDS YP_001327607.1 150397140 5322797 complement(1989467..1989847) 1 NC_009636.1 KEGG: sme:SMc04280 hypothetical signal peptide protein; putative signal peptide protein 1989847 5322797 Smed_1938 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327607.1 1989467 R 366394 CDS YP_001327608.1 150397141 5322798 complement(1990358..1992097) 1 NC_009636.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMc04283 putative transmembrane protein; TRAP dicarboxylate transporter subunit DctM 1992097 5322798 Smed_1939 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001327608.1 1990358 R 366394 CDS YP_001327609.1 150397142 5322799 complement(1992090..1992758) 1 NC_009636.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMc04287 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 1992758 5322799 Smed_1940 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001327609.1 1992090 R 366394 CDS YP_001327610.1 150397143 5322800 complement(1992834..1993973) 1 NC_009636.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMc04289 hypothetical protein; TRAP dicarboxylate transporter subunit DctP 1993973 5322800 Smed_1941 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001327610.1 1992834 R 366394 CDS YP_001327611.1 150397144 5322801 1994093..1995973 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc04292 probable adenylate/guanylate cyclase protein; hypothetical protein 1995973 5322801 Smed_1942 Sinorhizobium medicae WSM419 hypothetical protein YP_001327611.1 1994093 D 366394 CDS YP_001327612.1 150397145 5322802 complement(1996014..1997051) 1 NC_009636.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1997051 5322802 Smed_1943 Sinorhizobium medicae WSM419 cell division protein FtsZ YP_001327612.1 1996014 R 366394 CDS YP_001327613.1 150397146 5322803 1997604..1997798 1 NC_009636.1 KEGG: sme:SMc04298 hypothetical protein; hypothetical protein 1997798 5322803 Smed_1944 Sinorhizobium medicae WSM419 hypothetical protein YP_001327613.1 1997604 D 366394 CDS YP_001327614.1 150397147 5322804 complement(1997879..1998631) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: sme:SMc04299 hypothetical protein; HAD family hydrolase 1998631 5322804 Smed_1945 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001327614.1 1997879 R 366394 CDS YP_001327615.1 150397148 5322805 complement(1998935..1999996) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04300 probable ferric iron transport ATP-binding protein; ABC transporter-like protein 1999996 5322805 Smed_1946 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327615.1 1998935 R 366394 CDS YP_001327616.1 150397149 5322806 complement(1999984..2001663) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04316 probable ferric iron transport system permease protein; binding-protein-dependent transport system inner membrane protein 2001663 5322806 Smed_1947 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327616.1 1999984 R 366394 CDS YP_001327617.1 150397150 5322807 complement(2002028..2003008) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04317 iron-binding periplasmic protein; extracellular solute-binding protein 2003008 5322807 Smed_1948 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327617.1 2002028 R 366394 CDS YP_001327618.1 150397151 5322808 2003371..2003580 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc04318 cold shock transcription regulator protein; cold-shock DNA-binding domain-containing protein 2003580 5322808 Smed_1949 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001327618.1 2003371 D 366394 CDS YP_001327619.1 150397152 5322809 2003749..2004036 1 NC_009636.1 KEGG: sme:SMc04319 hypothetical protein; hypothetical protein 2004036 5322809 Smed_1950 Sinorhizobium medicae WSM419 hypothetical protein YP_001327619.1 2003749 D 366394 CDS YP_001327620.1 150397153 5322810 2004079..2004315 1 NC_009636.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2004315 rpsU 5322810 rpsU Sinorhizobium medicae WSM419 30S ribosomal protein S21 YP_001327620.1 2004079 D 366394 CDS YP_001327621.1 150397154 5322811 complement(2004476..2004961) 1 NC_009636.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: rle:RL1309 putative transmembrane protein; membrane-bound metal-dependent hydrolase 2004961 5322811 Smed_1952 Sinorhizobium medicae WSM419 membrane-bound metal-dependent hydrolase YP_001327621.1 2004476 R 366394 CDS YP_001327622.1 150397155 5322812 2005176..2005850 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc04321 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 2005850 5322812 Smed_1953 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001327622.1 2005176 D 366394 CDS YP_001327623.1 150397156 5322813 2005887..2006936 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc04322 putative oxidoreductase protein; aldo/keto reductase 2006936 5322813 Smed_1954 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001327623.1 2005887 D 366394 CDS YP_001327624.1 150397157 5322814 complement(2006980..2008206) 1 NC_009636.1 PFAM: aminotransferase class I and II; KEGG: sme:SMc04323 probable aminotransferase protein; GntR family transcriptional regulator 2008206 5322814 Smed_1955 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001327624.1 2006980 R 366394 CDS YP_001327625.1 150397158 5322815 2008417..2009022 1 NC_009636.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_CH02733 probable SAM-dependent methyltransferase protein; type 12 methyltransferase 2009022 5322815 Smed_1956 Sinorhizobium medicae WSM419 type 12 methyltransferase YP_001327625.1 2008417 D 366394 CDS YP_001327626.1 150397159 5322816 complement(2009769..2010119) 1 NC_009636.1 KEGG: sme:SMc04324 hypothetical protein; hypothetical protein 2010119 5322816 Smed_1957 Sinorhizobium medicae WSM419 hypothetical protein YP_001327626.1 2009769 R 366394 CDS YP_001327627.1 150397160 5322817 complement(2010166..2010855) 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc04338 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2010855 5322817 Smed_1958 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001327627.1 2010166 R 366394 CDS YP_001327628.1 150397161 5322818 complement(2010852..2011796) 1 NC_009636.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMc04341 putative amino acid-binding periplasmic protein; glycine betaine ABC transporter substrate-binding protein 2011796 5322818 Smed_1959 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001327628.1 2010852 R 366394 CDS YP_001327629.1 150397162 5322819 complement(2011949..2012902) 1 NC_009636.1 KEGG: sme:SMc04343 putative adenylate/guanylate cyclase transmembrane protein; putative adenylate/guanylate cyclase 2012902 5322819 Smed_1960 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001327629.1 2011949 R 366394 CDS YP_001327630.1 150397163 5322820 2013109..2013363 1 NC_009636.1 KEGG: sme:SMc04344 hypothetical signal peptide protein; putative signal peptide protein 2013363 5322820 Smed_1961 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327630.1 2013109 D 366394 CDS YP_001327631.1 150397164 5322821 complement(2013432..2014451) 1 NC_009636.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2014451 5322821 Smed_1962 Sinorhizobium medicae WSM419 ketol-acid reductoisomerase YP_001327631.1 2013432 R 366394 CDS YP_001327632.1 150397165 5322822 complement(2014511..2015158) 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc04348 putative transcription regulator protein; TetR family transcriptional regulator 2015158 5322822 Smed_1963 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001327632.1 2014511 R 366394 CDS YP_001327633.1 150397166 5322823 complement(2015580..2016170) 1 NC_009636.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: sme:SMc04352 conserved hypothetical signal peptide protein; transglutaminase 2016170 5322823 Smed_1964 Sinorhizobium medicae WSM419 transglutaminase YP_001327633.1 2015580 R 366394 CDS YP_001327634.1 150397167 5322824 2016341..2017039 1 NC_009636.1 KEGG: sme:SMc04357 putative glycine-rich protein; putative glycine-rich protein 2017039 5322824 Smed_1965 Sinorhizobium medicae WSM419 putative glycine-rich protein YP_001327634.1 2016341 D 366394 CDS YP_001327635.1 150397168 5322825 2017427..2018185 1 NC_009636.1 KEGG: sme:SMc04359 putative transmembrane protein; putative transmembrane protein 2018185 5322825 Smed_1966 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327635.1 2017427 D 366394 CDS YP_001327636.1 150397169 5322826 complement(2018225..2019124) 1 NC_009636.1 PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc04360 hypothetical protein; aminoglycoside phosphotransferase 2019124 5322826 Smed_1967 Sinorhizobium medicae WSM419 aminoglycoside phosphotransferase YP_001327636.1 2018225 R 366394 CDS YP_001327637.1 150397170 5322827 complement(2019308..2020576) 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sme:SMc04452 putative NADH dehydrogenase transmembrane protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2020576 5322827 Smed_1968 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001327637.1 2019308 R 366394 CDS YP_001327638.1 150397171 5322828 complement(2020602..2021120) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc01403 putative transcription regulator protein; AsnC family transcriptional regulator 2021120 5322828 Smed_1969 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001327638.1 2020602 R 366394 CDS YP_001327639.1 150397172 5322829 2021273..2021992 1 NC_009636.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: sme:SMc01404 putative aspartate racemase protein; aspartate racemase 2021992 5322829 Smed_1970 Sinorhizobium medicae WSM419 aspartate racemase YP_001327639.1 2021273 D 366394 CDS YP_001327640.1 150397173 5322830 complement(2022082..2022486) 1 NC_009636.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc01493 hypothetical protein; HxlR family transcriptional regulator 2022486 5322830 Smed_1971 Sinorhizobium medicae WSM419 HxlR family transcriptional regulator YP_001327640.1 2022082 R 366394 CDS YP_001327641.1 150397174 5322831 2022647..2023534 1 NC_009636.1 PFAM: dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sme:SMc01405 hypothetical protein; NmrA family protein 2023534 5322831 Smed_1972 Sinorhizobium medicae WSM419 NmrA family protein YP_001327641.1 2022647 D 366394 CDS YP_001327642.1 150397175 5322832 complement(2023637..2024056) 1 NC_009636.1 PFAM: protein of unknown function DUF983; KEGG: rle:RL1423 putative transmembrane protein; hypothetical protein 2024056 5322832 Smed_1973 Sinorhizobium medicae WSM419 hypothetical protein YP_001327642.1 2023637 R 366394 CDS YP_001327643.1 150397176 5322833 complement(2024258..2025802) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMc01406 putative transcription regulator protein; GntR family transcriptional regulator 2025802 5322833 Smed_1974 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001327643.1 2024258 R 366394 CDS YP_001327644.1 150397177 5322834 2025958..2026464 1 NC_009636.1 KEGG: sme:SMb20473 hypothetical protein; hypothetical protein 2026464 5322834 Smed_1975 Sinorhizobium medicae WSM419 hypothetical protein YP_001327644.1 2025958 D 366394 CDS YP_001327645.1 150397178 5322835 complement(2026582..2028414) 1 NC_009636.1 PFAM: Carbamoyltransferase; KEGG: sme:SMb20472 putative nodulation protein; carbamoyltransferase 2028414 5322835 Smed_1976 Sinorhizobium medicae WSM419 carbamoyltransferase YP_001327645.1 2026582 R 366394 CDS YP_001327646.1 150397179 5322836 complement(2028427..2028576) 1 NC_009636.1 KEGG: sme:SMb20471 hypothetical protein; hypothetical protein 2028576 5322836 Smed_1977 Sinorhizobium medicae WSM419 hypothetical protein YP_001327646.1 2028427 R 366394 CDS YP_001327647.1 150397180 5322837 complement(2028619..2029050) 1 NC_009636.1 KEGG: sme:SMb20470 hypothetical protein; hypothetical protein 2029050 5322837 Smed_1978 Sinorhizobium medicae WSM419 hypothetical protein YP_001327647.1 2028619 R 366394 CDS YP_001327648.1 150397181 5322838 2029480..2030823 1 NC_009636.1 KEGG: sme:SMb20469 hypothetical protein; hypothetical protein 2030823 5322838 Smed_1979 Sinorhizobium medicae WSM419 hypothetical protein YP_001327648.1 2029480 D 366394 CDS YP_001327649.1 150397182 5322839 complement(2030877..2031557) 1 NC_009636.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sme:SMb20468 putative sensory transduction DNA-binding response regulator protein; two component LuxR family transcriptional regulator 2031557 5322839 Smed_1980 Sinorhizobium medicae WSM419 two component LuxR family transcriptional regulator YP_001327649.1 2030877 R 366394 CDS YP_001327650.1 150397183 5322840 complement(2031739..2033754) 1 NC_009636.1 PFAM: acyltransferase 3; KEGG: hch:HCH_02732 predicted acyltransferase; acyltransferase 3 2033754 5322840 Smed_1981 Sinorhizobium medicae WSM419 acyltransferase 3 YP_001327650.1 2031739 R 366394 CDS YP_001327651.1 150397184 5322841 complement(2033982..2034734) 1 NC_009636.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2034734 5322841 Smed_1982 Sinorhizobium medicae WSM419 pyridoxine 5'-phosphate synthase YP_001327651.1 2033982 R 366394 CDS YP_001327652.1 150397185 5322842 2034932..2035639 1 NC_009636.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: sme:SMc01408 hypothetical protein; hypothetical protein 2035639 5322842 Smed_1983 Sinorhizobium medicae WSM419 hypothetical protein YP_001327652.1 2034932 D 366394 CDS YP_001327653.1 150397186 5322843 2035869..2036975 1 NC_009636.1 KEGG: sme:SMc01409 hypothetical protein; hypothetical protein 2036975 5322843 Smed_1984 Sinorhizobium medicae WSM419 hypothetical protein YP_001327653.1 2035869 D 366394 CDS YP_001327654.1 150397187 5322844 2037285..2037527 1 NC_009636.1 PFAM: 17 kDa surface antigen; KEGG: sme:SMc01410 putative lipoprotein transmembrane; 17 kDa surface antigen 2037527 5322844 Smed_1985 Sinorhizobium medicae WSM419 17 kDa surface antigen YP_001327654.1 2037285 D 366394 CDS YP_001327655.1 150397188 5322845 2037542..2037910 1 NC_009636.1 KEGG: sme:SMc01489 hypothetical signal peptide protein; putative signal peptide protein 2037910 5322845 Smed_1986 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327655.1 2037542 D 366394 CDS YP_001327656.1 150397189 5322846 complement(2037935..2038630) 1 NC_009636.1 KEGG: sme:SMc01490 hypothetical protein; hypothetical protein 2038630 5322846 Smed_1987 Sinorhizobium medicae WSM419 hypothetical protein YP_001327656.1 2037935 R 366394 CDS YP_001327657.1 150397190 5322847 complement(2038652..2039836) 1 NC_009636.1 KEGG: sme:SMc01411 hypothetical protein; hypothetical protein 2039836 5322847 Smed_1988 Sinorhizobium medicae WSM419 hypothetical protein YP_001327657.1 2038652 R 366394 CDS YP_001327658.1 150397191 5322848 complement(2039871..2040647) 1 NC_009636.1 PFAM: TfuA domain protein core; KEGG: sme:SMc01412 hypothetical protein; TfuA domain-containing protein 2040647 5322848 Smed_1989 Sinorhizobium medicae WSM419 TfuA domain-containing protein YP_001327658.1 2039871 R 366394 CDS YP_001327659.1 150397192 5322849 complement(2040655..2041884) 1 NC_009636.1 PFAM: protein of unknown function DUF181; KEGG: sme:SMc01413 hypothetical protein; hypothetical protein 2041884 5322849 Smed_1990 Sinorhizobium medicae WSM419 hypothetical protein YP_001327659.1 2040655 R 366394 CDS YP_001327660.1 150397193 5322850 complement(2041868..2044939) 1 NC_009636.1 SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01491 conserved hypothetical protein; adenylyl cyclase class-3/4/guanylyl cyclase 2044939 5322850 Smed_1991 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001327660.1 2041868 R 366394 CDS YP_001327661.1 150397194 5322851 2045020..2045265 1 NC_009636.1 hypothetical protein 2045265 5322851 Smed_1992 Sinorhizobium medicae WSM419 hypothetical protein YP_001327661.1 2045020 D 366394 CDS YP_001327662.1 150397195 5322852 2045368..2047260 1 NC_009636.1 KEGG: sme:SMc01492 probable suppressor of E.coli rpoH thermosensitive mutation transmembrane protein; putative suppressor 2047260 5322852 Smed_1993 Sinorhizobium medicae WSM419 putative suppressor YP_001327662.1 2045368 D 366394 CDS YP_001327663.1 150397196 5322853 complement(2047308..2048435) 1 NC_009636.1 KEGG: sme:SMc01414 exodeoxyribonuclease V; exodeoxyribonuclease V 2048435 5322853 Smed_1994 Sinorhizobium medicae WSM419 exodeoxyribonuclease V YP_001327663.1 2047308 R 366394 CDS YP_001327664.1 150397197 5322854 2048687..2049775 1 NC_009636.1 PFAM: putative ammonia monooxygenase; KEGG: sme:SMc01415 putative transmembrane protein; putative ammonia monooxygenase 2049775 5322854 Smed_1995 Sinorhizobium medicae WSM419 putative ammonia monooxygenase YP_001327664.1 2048687 D 366394 CDS YP_001327665.1 150397198 5322855 2049948..2050322 1 NC_009636.1 PFAM: Secreted repeat of unknown function; KEGG: sme:SMc01418 hypothetical signal peptide protein; hypothetical protein 2050322 5322855 Smed_1996 Sinorhizobium medicae WSM419 hypothetical protein YP_001327665.1 2049948 D 366394 CDS YP_001327666.1 150397199 5322856 2050306..2050860 1 NC_009636.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc01419 probable RNA polymerase sigma factor protein; ECF subfamily RNA polymerase sigma-24 factor 2050860 5322856 Smed_1997 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001327666.1 2050306 D 366394 CDS YP_001327667.1 150397200 5322857 2050857..2051666 1 NC_009636.1 KEGG: sme:SMc01420 hypothetical protein; putative transmembrane anti-sigma factor 2051666 5322857 Smed_1998 Sinorhizobium medicae WSM419 putative transmembrane anti-sigma factor YP_001327667.1 2050857 D 366394 CDS YP_001327668.1 150397201 5322859 complement(2052047..2052706) 1 NC_009636.1 PFAM: nitrile hydratase beta subunit; KEGG: sme:SMc01423 probable nitrile hydratase subunit beta protein; nitrile hydratase 2052706 5322859 Smed_2000 Sinorhizobium medicae WSM419 nitrile hydratase YP_001327668.1 2052047 R 366394 CDS YP_001327669.1 150397202 5322860 complement(2052703..2053344) 1 NC_009636.1 TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain; KEGG: sme:SMc01424 probable nitrile hydratase subunit alpha protein; nitrile hydratase subunit alpha 2053344 5322860 Smed_2001 Sinorhizobium medicae WSM419 nitrile hydratase subunit alpha YP_001327669.1 2052703 R 366394 CDS YP_001327670.1 150397203 5322861 complement(2053427..2054020) 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc01425 hypothetical protein; lysine exporter protein LysE/YggA 2054020 5322861 Smed_2002 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001327670.1 2053427 R 366394 CDS YP_001327671.1 150397204 5322862 2054300..2055034 1 NC_009636.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc01426 hypothetical protein; type 11 methyltransferase 2055034 5322862 Smed_2003 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001327671.1 2054300 D 366394 CDS YP_001327672.1 150397205 5322863 complement(2055060..2055284) 1 NC_009636.1 KEGG: sme:SMc01427 hypothetical protein; hypothetical protein 2055284 5322863 Smed_2004 Sinorhizobium medicae WSM419 hypothetical protein YP_001327672.1 2055060 R 366394 CDS YP_001327673.1 150397206 5322864 complement(2055442..2055651) 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc01428 probable cold shock transcription regulator protein; cold-shock DNA-binding domain-containing protein 2055651 5322864 Smed_2005 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001327673.1 2055442 R 366394 CDS YP_001327674.1 150397207 5322865 2055970..2056815 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc01429 putative oxidoreductase protein; aldo/keto reductase 2056815 5322865 Smed_2006 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001327674.1 2055970 D 366394 CDS YP_001327675.1 150397208 5322866 complement(2056900..2057472) 1 NC_009636.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2057472 ilvH 5322866 ilvH Sinorhizobium medicae WSM419 acetolactate synthase 3 regulatory subunit YP_001327675.1 2056900 R 366394 CDS YP_001327676.1 150397209 5322867 complement(2057495..2059273) 1 NC_009636.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sme:SMc01431 acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit 2059273 5322867 Smed_2008 Sinorhizobium medicae WSM419 acetolactate synthase 3 catalytic subunit YP_001327676.1 2057495 R 366394 CDS YP_001327677.1 150397210 5322868 2059571..2061559 1 NC_009636.1 PFAM: protein of unknown function DUF87; KEGG: sme:SMc01432 hypothetical protein; hypothetical protein 2061559 5322868 Smed_2009 Sinorhizobium medicae WSM419 hypothetical protein YP_001327677.1 2059571 D 366394 CDS YP_001327678.1 150397211 5322869 2061670..2062032 1 NC_009636.1 KEGG: sme:SMc01433 hypothetical protein; hypothetical protein 2062032 5322869 Smed_2010 Sinorhizobium medicae WSM419 hypothetical protein YP_001327678.1 2061670 D 366394 CDS YP_001327679.1 150397212 5322870 complement(2062086..2063003) 1 NC_009636.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2063003 miaA 5322870 miaA Sinorhizobium medicae WSM419 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001327679.1 2062086 R 366394 CDS YP_001327680.1 150397213 5322871 2063005..2063892 1 NC_009636.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc01494 putative phosphoserine phosphatase protein; phosphoserine phosphatase SerB 2063892 5322871 Smed_2012 Sinorhizobium medicae WSM419 phosphoserine phosphatase SerB YP_001327680.1 2063005 D 366394 CDS YP_001327681.1 150397214 5322872 2063889..2064464 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01437 putative acetyl transferase protein; N-acetyltransferase GCN5 2064464 5322872 Smed_2013 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327681.1 2063889 D 366394 CDS YP_001327682.1 150397215 5322873 complement(2064642..2066150) 1 NC_009636.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sme:SMc01438 putative protease precursor signal peptide protein; protease Do 2066150 5322873 Smed_2014 Sinorhizobium medicae WSM419 protease Do YP_001327682.1 2064642 R 366394 CDS YP_001327683.1 150397216 5322874 complement(2066358..2066744) 1 NC_009636.1 PFAM: amino acid-binding ACT domain protein; KEGG: sme:SMc01439 hypothetical protein; amino acid-binding ACT domain-containing protein 2066744 5322874 Smed_2015 Sinorhizobium medicae WSM419 amino acid-binding ACT domain-containing protein YP_001327683.1 2066358 R 366394 CDS YP_001327684.1 150397217 5322875 complement(2066751..2066936) 1 NC_009636.1 KEGG: mlo:msl1453 hypothetical protein; hypothetical protein 2066936 5322875 Smed_2016 Sinorhizobium medicae WSM419 hypothetical protein YP_001327684.1 2066751 R 366394 CDS YP_001327685.1 150397218 5322876 complement(2066944..2067876) 1 NC_009636.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: sme:SMc01440 putative hydrolase serine protease transmembrane protein; HflC protein 2067876 5322876 Smed_2017 Sinorhizobium medicae WSM419 HflC protein YP_001327685.1 2066944 R 366394 CDS YP_001327686.1 150397219 5322877 complement(2067873..2068961) 1 NC_009636.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sme:SMc01441 putative membrane bound protease protein; HflK protein 2068961 5322877 Smed_2018 Sinorhizobium medicae WSM419 HflK protein YP_001327686.1 2067873 R 366394 CDS YP_001327687.1 150397220 5322878 complement(2069156..2069719) 1 NC_009636.1 PFAM: dihydrofolate reductase region; KEGG: sme:SMc01442 probable dihydrofolate reductase protein; dihydrofolate reductase 2069719 5322878 Smed_2019 Sinorhizobium medicae WSM419 dihydrofolate reductase YP_001327687.1 2069156 R 366394 CDS YP_001327688.1 150397221 5322879 complement(2069712..2070317) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc01443 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 2070317 5322879 Smed_2020 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001327688.1 2069712 R 366394 CDS YP_001327689.1 150397222 5322880 complement(2070435..2071229) 1 NC_009636.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2071229 thyA 5322880 thyA Sinorhizobium medicae WSM419 thymidylate synthase YP_001327689.1 2070435 R 366394 CDS YP_001327690.1 150397223 5322881 complement(2071333..2071551) 1 NC_009636.1 KEGG: sme:SMc01445 hypothetical protein; hypothetical protein 2071551 5322881 Smed_2022 Sinorhizobium medicae WSM419 hypothetical protein YP_001327690.1 2071333 R 366394 CDS YP_001327691.1 150397224 5322882 complement(2071601..2071843) 1 NC_009636.1 KEGG: sme:SMc01446 hypothetical protein; hypothetical protein 2071843 5322882 Smed_2023 Sinorhizobium medicae WSM419 hypothetical protein YP_001327691.1 2071601 R 366394 CDS YP_001327692.1 150397225 5322883 complement(2071854..2072060) 1 NC_009636.1 KEGG: sme:SMc01447 hypothetical protein; hypothetical protein 2072060 5322883 Smed_2024 Sinorhizobium medicae WSM419 hypothetical protein YP_001327692.1 2071854 R 366394 CDS YP_001327693.1 150397226 5322884 complement(2072252..2072563) 1 NC_009636.1 hypothetical protein 2072563 5322884 Smed_2025 Sinorhizobium medicae WSM419 hypothetical protein YP_001327693.1 2072252 R 366394 CDS YP_001327694.1 150397227 5322885 complement(2072580..2072888) 1 NC_009636.1 KEGG: sme:SMc01449 hypothetical protein; hypothetical protein 2072888 5322885 Smed_2026 Sinorhizobium medicae WSM419 hypothetical protein YP_001327694.1 2072580 R 366394 CDS YP_001327695.1 150397228 5322886 2073606..2074121 1 NC_009636.1 PFAM: protein of unknown function DUF1321; KEGG: sme:SMc01450 hypothetical protein; hypothetical protein 2074121 5322886 Smed_2027 Sinorhizobium medicae WSM419 hypothetical protein YP_001327695.1 2073606 D 366394 CDS YP_001327696.1 150397229 5322887 2074161..2074376 1 NC_009636.1 KEGG: sme:SMc01451 hypothetical protein; hypothetical protein 2074376 5322887 Smed_2028 Sinorhizobium medicae WSM419 hypothetical protein YP_001327696.1 2074161 D 366394 CDS YP_001327697.1 150397230 5322888 2074447..2074701 1 NC_009636.1 KEGG: sme:SMc01452 hypothetical protein; hypothetical protein 2074701 5322888 Smed_2029 Sinorhizobium medicae WSM419 hypothetical protein YP_001327697.1 2074447 D 366394 CDS YP_001327698.1 150397231 5322889 complement(2074733..2078473) 1 NC_009636.1 KEGG: sme:SMc01454 hypothetical protein; hypothetical protein 2078473 5322889 Smed_2030 Sinorhizobium medicae WSM419 hypothetical protein YP_001327698.1 2074733 R 366394 CDS YP_001327699.1 150397232 5322890 complement(2078538..2080016) 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc01455 putative D-lactate dehydrogenase (cytochrome) protein; D-lactate dehydrogenase 2080016 5322890 Smed_2031 Sinorhizobium medicae WSM419 D-lactate dehydrogenase YP_001327699.1 2078538 R 366394 CDS YP_001327700.1 150397233 5322891 2080474..2080908 1 NC_009636.1 PFAM: Protein of unknown function DUF1772; KEGG: sme:SMc01456 hypothetical protein; hypothetical protein 2080908 5322891 Smed_2032 Sinorhizobium medicae WSM419 hypothetical protein YP_001327700.1 2080474 D 366394 CDS YP_001327701.1 150397234 5322892 complement(2080945..2084079) 1 NC_009636.1 PFAM: acriflavin resistance protein; KEGG: sme:SMc01457 putative transport transmembrane protein; acriflavin resistance protein 2084079 5322892 Smed_2033 Sinorhizobium medicae WSM419 acriflavin resistance protein YP_001327701.1 2080945 R 366394 CDS YP_001327702.1 150397235 5322893 complement(2084076..2085287) 1 NC_009636.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc01458 putative transport protein; RND family efflux transporter MFP subunit 2085287 5322893 Smed_2034 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001327702.1 2084076 R 366394 CDS YP_001327703.1 150397236 5322894 2085609..2086430 1 NC_009636.1 PFAM: cyclase family protein; KEGG: sme:SMc01459 hypothetical transmembrane protein; cyclase family protein 2086430 5322894 Smed_2035 Sinorhizobium medicae WSM419 cyclase family protein YP_001327703.1 2085609 D 366394 CDS YP_001327704.1 150397237 5322895 2086450..2086881 1 NC_009636.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMc01460 hypothetical protein; alkylhydroperoxidase 2086881 5322895 Smed_2036 Sinorhizobium medicae WSM419 alkylhydroperoxidase YP_001327704.1 2086450 D 366394 CDS YP_001327705.1 150397238 5322896 2086986..2089538 1 NC_009636.1 PFAM: UvrD/REP helicase; KEGG: sme:SMc01461 probable DNA helicase II protein; UvrD/REP helicase 2089538 5322896 Smed_2037 Sinorhizobium medicae WSM419 UvrD/REP helicase YP_001327705.1 2086986 D 366394 CDS YP_001327706.1 150397239 5322897 complement(2089642..2090751) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: jan:Jann_1468 oxidoreductase-like; oxidoreductase domain-containing protein 2090751 5322897 Smed_2038 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001327706.1 2089642 R 366394 CDS YP_001327707.1 150397240 5322898 2091126..2092163 1 NC_009636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mll7360 hypothetical protein; regulatory protein LacI 2092163 5322898 Smed_2039 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001327707.1 2091126 D 366394 CDS YP_001327708.1 150397241 5322899 2092186..2093262 1 NC_009636.1 KEGG: mlo:mll4958 hypothetical protein; hypothetical protein 2093262 5322899 Smed_2040 Sinorhizobium medicae WSM419 hypothetical protein YP_001327708.1 2092186 D 366394 CDS YP_001327709.1 150397242 5322900 2093525..2094469 1 NC_009636.1 KEGG: mlo:mll7366 ABC transporter binding protein; ABC transporter binding protein 2094469 5322900 Smed_2041 Sinorhizobium medicae WSM419 ABC transporter binding protein YP_001327709.1 2093525 D 366394 CDS YP_001327710.1 150397243 5322901 2094538..2095524 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: mlo:mll7365 ABC transporter permease protein; monosaccharide-transporting ATPase 2095524 5322901 Smed_2042 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001327710.1 2094538 D 366394 CDS YP_001327711.1 150397244 5322902 2095527..2096294 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll7362 ABC sugar transport ATP binding protein; ABC transporter-like protein 2096294 5322902 Smed_2043 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327711.1 2095527 D 366394 CDS YP_001327712.1 150397245 5322903 complement(2096440..2096901) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01462 putative acetyltransferase protein; N-acetyltransferase GCN5 2096901 5322903 Smed_2044 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327712.1 2096440 R 366394 CDS YP_001327713.1 150397246 5322904 complement(2096979..2097650) 1 NC_009636.1 PFAM: phosphoribosyltransferase; KEGG: sme:SMc01463 hypothetical protein; phosphoribosyltransferase 2097650 5322904 Smed_2045 Sinorhizobium medicae WSM419 phosphoribosyltransferase YP_001327713.1 2096979 R 366394 CDS YP_001327714.1 150397247 5322905 2097741..2099057 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sme:SMc01464 hypothetical protein; diguanylate cyclase 2099057 5322905 Smed_2046 Sinorhizobium medicae WSM419 diguanylate cyclase YP_001327714.1 2097741 D 366394 CDS YP_001327715.1 150397248 5322906 2099167..2099664 1 NC_009636.1 PFAM: CreA family protein; KEGG: sme:SMc01465 putative CREA protein; CreA family protein 2099664 5322906 Smed_2047 Sinorhizobium medicae WSM419 CreA family protein YP_001327715.1 2099167 D 366394 CDS YP_001327716.1 150397249 5322907 complement(2099865..2100224) 1 NC_009636.1 KEGG: sme:SMc01467 hypothetical signal peptide protein; putative signal peptide protein 2100224 5322907 Smed_2048 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327716.1 2099865 R 366394 CDS YP_001327717.1 150397250 5322908 complement(2100466..2100864) 1 NC_009636.1 KEGG: sme:SMc01467 hypothetical signal peptide protein; putative signal peptide protein 2100864 5322908 Smed_2049 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327717.1 2100466 R 366394 CDS YP_001327718.1 150397251 5322909 complement(2101188..2101652) 1 NC_009636.1 PFAM: CheW domain protein; KEGG: sme:SMc01468 probable chemotaxis protein; putative CheW protein 2101652 5322909 Smed_2050 Sinorhizobium medicae WSM419 putative CheW protein YP_001327718.1 2101188 R 366394 CDS YP_001327719.1 150397252 5322910 complement(2101655..2103808) 1 NC_009636.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sme:SMc01469 probable methyl accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer 2103808 5322910 Smed_2051 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001327719.1 2101655 R 366394 CDS YP_001327720.1 150397253 5322911 2103990..2104148 1 NC_009636.1 KEGG: sme:SMc01470 hypothetical signal peptide protein; putative signal peptide protein 2104148 5322911 Smed_2052 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327720.1 2103990 D 366394 CDS YP_001327721.1 150397254 5322912 2104296..2104895 1 NC_009636.1 PFAM: electron transport protein SCO1/SenC; KEGG: sme:SMc01471 putative cytochrome c oxidase assembly factor transmembrane protein; electron transport protein SCO1/SenC 2104895 5322912 Smed_2053 Sinorhizobium medicae WSM419 electron transport protein SCO1/SenC YP_001327721.1 2104296 D 366394 CDS YP_001327722.1 150397255 5322913 2105039..2105932 1 NC_009636.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 2105932 prmA 5322913 prmA Sinorhizobium medicae WSM419 50S ribosomal protein L11 methyltransferase YP_001327722.1 2105039 D 366394 CDS YP_001327723.1 150397256 5322914 2106475..2108310 1 NC_009636.1 PFAM: creatinase; peptidase M24; KEGG: sme:SMc01885 putative aminopeptidase P protein; peptidase M24 2108310 5322914 Smed_2055 Sinorhizobium medicae WSM419 peptidase M24 YP_001327723.1 2106475 D 366394 CDS YP_001327724.1 150397257 5322915 complement(2108593..2108832) 1 NC_009636.1 KEGG: sme:SMc01884 hypothetical signal peptide protein; putative signal peptide protein 2108832 5322915 Smed_2056 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327724.1 2108593 R 366394 CDS YP_001327725.1 150397258 5322916 complement(2108947..2109255) 1 NC_009636.1 PFAM: branched-chain amino acid transport; KEGG: sme:SMc01883 hypothetical protein; branched-chain amino acid transport 2109255 5322916 Smed_2057 Sinorhizobium medicae WSM419 branched-chain amino acid transport YP_001327725.1 2108947 R 366394 CDS YP_001327726.1 150397259 5322917 complement(2109259..2109975) 1 NC_009636.1 PFAM: AzlC family protein; KEGG: sme:SMc01882 hypothetical protein; AzlC family protein 2109975 5322917 Smed_2058 Sinorhizobium medicae WSM419 AzlC family protein YP_001327726.1 2109259 R 366394 CDS YP_001327727.1 150397260 5322918 complement(2110193..2111014) 1 NC_009636.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2111014 panB 5322918 panB Sinorhizobium medicae WSM419 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001327727.1 2110193 R 366394 CDS YP_001327728.1 150397261 5322919 complement(2111017..2111892) 1 NC_009636.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2111892 panC 5322919 panC Sinorhizobium medicae WSM419 pantoate--beta-alanine ligase YP_001327728.1 2111017 R 366394 CDS YP_001327729.1 150397262 5322920 2112254..2112658 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01879 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2112658 5322920 Smed_2061 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001327729.1 2112254 D 366394 CDS YP_001327730.1 150397263 5322921 2112943..2113854 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120007 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 2113854 5322921 Smed_2062 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327730.1 2112943 D 366394 CDS YP_001327731.1 150397264 5322922 2113851..2114732 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0851 putative multiple sugar transport system permease protein; binding-protein-dependent transport system inner membrane protein 2114732 5322922 Smed_2063 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327731.1 2113851 D 366394 CDS YP_001327732.1 150397265 5322923 2114764..2116113 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_4775 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2116113 5322923 Smed_2064 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327732.1 2114764 D 366394 CDS YP_001327733.1 150397266 5322924 2116263..2117891 1 NC_009636.1 PFAM: sulfatase; KEGG: sus:Acid_1528 sulfatase; sulfatase 2117891 5322924 Smed_2065 Sinorhizobium medicae WSM419 sulfatase YP_001327733.1 2116263 D 366394 CDS YP_001327734.1 150397267 5322925 2117962..2119011 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpa:RPA3471 ABC transporter, ATP-binding protein; ABC transporter-like protein 2119011 5322925 Smed_2066 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327734.1 2117962 D 366394 CDS YP_001327735.1 150397268 5322926 2118992..2119393 1 NC_009636.1 KEGG: rle:RL1496 putative sugar isomerase family protein; RpiR family transcriptional regulator 2119393 5322926 Smed_2067 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001327735.1 2118992 D 366394 CDS YP_001327736.1 150397269 5322927 complement(2119512..2120987) 1 NC_009636.1 PFAM: sulfatase; KEGG: stm:STM0886 putative sulfatase; sulfatase 2120987 5322927 Smed_2068 Sinorhizobium medicae WSM419 sulfatase YP_001327736.1 2119512 R 366394 CDS YP_001327737.1 150397270 5322928 2121042..2122022 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_2486 galactose-binding protein regulator; LysR family transcriptional regulator 2122022 5322928 Smed_2069 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327737.1 2121042 D 366394 CDS YP_001327738.1 150397271 5322929 complement(2122076..2124229) 1 NC_009636.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 2124229 ligA 5322929 ligA Sinorhizobium medicae WSM419 NAD-dependent DNA ligase LigA YP_001327738.1 2122076 R 366394 CDS YP_001327739.1 150397272 5322930 complement(2124395..2126068) 1 NC_009636.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: sme:SMc01877 probable DNA repair protein; DNA repair protein RecN 2126068 5322930 Smed_2071 Sinorhizobium medicae WSM419 DNA repair protein RecN YP_001327739.1 2124395 R 366394 CDS YP_001327740.1 150397273 5322931 complement(2126104..2126970) 1 NC_009636.1 KEGG: sme:SMc01876 hypothetical transmembrane protein; hypothetical protein 2126970 5322931 Smed_2072 Sinorhizobium medicae WSM419 hypothetical protein YP_001327740.1 2126104 R 366394 CDS YP_001327741.1 150397274 5322932 complement(2127249..2128202) 1 NC_009636.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2128202 lpxC 5322932 lpxC Sinorhizobium medicae WSM419 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001327741.1 2127249 R 366394 CDS YP_001327742.1 150397275 5322933 complement(2128628..2130400) 1 NC_009636.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2130400 5322933 Smed_2074 Sinorhizobium medicae WSM419 cell division protein FtsZ YP_001327742.1 2128628 R 366394 CDS YP_001327743.1 150397276 5322934 complement(2130495..2131823) 1 NC_009636.1 PFAM: cell division protein FtsA; KEGG: sme:SMc01873 cell division protein; cell division protein FtsA 2131823 5322934 Smed_2075 Sinorhizobium medicae WSM419 cell division protein FtsA YP_001327743.1 2130495 R 366394 CDS YP_001327744.1 150397277 5322935 complement(2131820..2132749) 1 NC_009636.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: sme:SMc01872 cell division transmembrane protein; cell division protein FtsQ 2132749 5322935 Smed_2076 Sinorhizobium medicae WSM419 cell division protein FtsQ YP_001327744.1 2131820 R 366394 CDS YP_001327745.1 150397278 5322936 complement(2132737..2133663) 1 NC_009636.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2133663 ddl 5322936 ddl Sinorhizobium medicae WSM419 D-alanine--D-alanine ligase YP_001327745.1 2132737 R 366394 CDS YP_001327746.1 150397279 5322937 complement(2133977..2134663) 1 NC_009636.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 2134663 5322937 Smed_2078 Sinorhizobium medicae WSM419 aquaporin Z YP_001327746.1 2133977 R 366394 CDS YP_001327747.1 150397280 5322938 2135064..2136374 1 NC_009636.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMc01869 putative transport transmembrane protein; major facilitator superfamily metabolite/H(+) symporter 2136374 5322938 Smed_2079 Sinorhizobium medicae WSM419 major facilitator superfamily metabolite/H(+) symporter YP_001327747.1 2135064 D 366394 CDS YP_001327748.1 150397281 5322939 complement(2136445..2137419) 1 NC_009636.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2137419 murB 5322939 murB Sinorhizobium medicae WSM419 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001327748.1 2136445 R 366394 CDS YP_001327749.1 150397282 5322940 complement(2137416..2138831) 1 NC_009636.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2138831 murC 5322940 murC Sinorhizobium medicae WSM419 UDP-N-acetylmuramate--L-alanine ligase YP_001327749.1 2137416 R 366394 CDS YP_001327750.1 150397283 5322941 complement(2138828..2139952) 1 NC_009636.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2139952 murG 5322941 murG Sinorhizobium medicae WSM419 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001327750.1 2138828 R 366394 CDS YP_001327751.1 150397284 5322942 complement(2139970..2141124) 1 NC_009636.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: sme:SMc01865 probable cell division protein FTSW peptidoglycan synthesis; cell division protein FtsW 2141124 5322942 Smed_2083 Sinorhizobium medicae WSM419 cell division protein FtsW YP_001327751.1 2139970 R 366394 CDS YP_001327752.1 150397285 5322943 complement(2141181..2142572) 1 NC_009636.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2142572 murD 5322943 murD Sinorhizobium medicae WSM419 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001327752.1 2141181 R 366394 CDS YP_001327753.1 150397286 5322944 complement(2142578..2143678) 1 NC_009636.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2143678 mraY 5322944 mraY Sinorhizobium medicae WSM419 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001327753.1 2142578 R 366394 CDS YP_001327754.1 150397287 5322945 complement(2143909..2145342) 1 NC_009636.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sme:SMc01862 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 2145342 5322945 Smed_2086 Sinorhizobium medicae WSM419 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001327754.1 2143909 R 366394 CDS YP_001327755.1 150397288 5322946 complement(2145344..2146804) 1 NC_009636.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2146804 murE 5322946 murE Sinorhizobium medicae WSM419 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001327755.1 2145344 R 366394 CDS YP_001327756.1 150397289 5322947 complement(2146974..2148722) 1 NC_009636.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: sme:SMc01860 probable penicillin-binding transmembrane protein; peptidoglycan glycosyltransferase 2148722 5322947 Smed_2088 Sinorhizobium medicae WSM419 peptidoglycan glycosyltransferase YP_001327756.1 2146974 R 366394 CDS YP_001327757.1 150397290 5322948 complement(2148722..2149120) 1 NC_009636.1 KEGG: sme:SMc01859 hypothetical protein; hypothetical protein 2149120 5322948 Smed_2089 Sinorhizobium medicae WSM419 hypothetical protein YP_001327757.1 2148722 R 366394 CDS YP_001327758.1 150397291 5322949 complement(2149127..2150215) 1 NC_009636.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: sme:SMc01858 S-adenosyl-methyltransferase; S-adenosyl-methyltransferase MraW 2150215 mraW 5322949 mraW Sinorhizobium medicae WSM419 S-adenosyl-methyltransferase MraW YP_001327758.1 2149127 R 366394 CDS YP_001327759.1 150397292 5322950 complement(2150269..2150709) 1 NC_009636.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2150709 5322950 Smed_2091 Sinorhizobium medicae WSM419 cell division protein MraZ YP_001327759.1 2150269 R 366394 CDS YP_001327760.1 150397293 5322952 complement(2151601..2152929) 1 NC_009636.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 2152929 5322952 Smed_2092 Sinorhizobium medicae WSM419 D-serine dehydratase YP_001327760.1 2151601 R 366394 CDS YP_001327761.1 150397294 5322953 complement(2152980..2154230) 1 NC_009636.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2154230 5322953 Smed_2093 Sinorhizobium medicae WSM419 D-amino acid dehydrogenase small subunit YP_001327761.1 2152980 R 366394 CDS YP_001327762.1 150397295 5322954 complement(2154290..2155186) 1 NC_009636.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2155186 purU 5322954 purU Sinorhizobium medicae WSM419 formyltetrahydrofolate deformylase YP_001327762.1 2154290 R 366394 CDS YP_001327763.1 150397296 5322955 complement(2155208..2156101) 1 NC_009636.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pde:Pden_4905 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 2156101 5322955 Smed_2095 Sinorhizobium medicae WSM419 methenyltetrahydrofolate cyclohydrolase YP_001327763.1 2155208 R 366394 CDS YP_001327764.1 150397297 5322956 complement(2156225..2157502) 1 NC_009636.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; glycine hydroxymethyltransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mag:amb2339 glycine/serine hydroxymethyltransferase; glycine hydroxymethyltransferase 2157502 5322956 Smed_2096 Sinorhizobium medicae WSM419 glycine hydroxymethyltransferase YP_001327764.1 2156225 R 366394 CDS YP_001327765.1 150397298 5322957 2157638..2158558 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4368 transcriptional regulator, LysR family; LysR family transcriptional regulator 2158558 5322957 Smed_2097 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327765.1 2157638 D 366394 CDS YP_001327766.1 150397299 5322958 2158833..2159864 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; KEGG: bja:bll2909 probable amino acid binding protein; extracellular solute-binding protein 2159864 5322958 Smed_2098 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327766.1 2158833 D 366394 CDS YP_001327767.1 150397300 5322959 2159934..2161142 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hch:HCH_05808 ABC-type amino acid transport system, permease component; binding-protein-dependent transport system inner membrane protein 2161142 5322959 Smed_2099 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327767.1 2159934 D 366394 CDS YP_001327768.1 150397301 5322960 2161142..2162272 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ana:alr4166 polar amino acid transport system permease protein; polar amino acid ABC transporter inner membrane subunit 2162272 5322960 Smed_2100 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001327768.1 2161142 D 366394 CDS YP_001327769.1 150397302 5322961 2162302..2163060 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_3047 ABC transporter related; ABC transporter-like protein 2163060 5322961 Smed_2101 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327769.1 2162302 D 366394 CDS YP_001327770.1 150397303 5322962 complement(2163188..2164375) 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc01856 putative sarcosine oxidase protein; FAD dependent oxidoreductase 2164375 5322962 Smed_2102 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001327770.1 2163188 R 366394 CDS YP_001327771.1 150397304 5322963 complement(2164510..2165049) 1 NC_009636.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc01855 hypothetical protein; lytic transglycosylase 2165049 5322963 Smed_2103 Sinorhizobium medicae WSM419 lytic transglycosylase YP_001327771.1 2164510 R 366394 CDS YP_001327772.1 150397305 5322964 complement(2165276..2166040) 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: sme:SMc01854 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2166040 5322964 Smed_2104 Sinorhizobium medicae WSM419 N-acetylmuramoyl-L-alanine amidase YP_001327772.1 2165276 R 366394 CDS YP_001327773.1 150397306 5322965 complement(2166037..2166744) 1 NC_009636.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sme:SMc01853 DnaJ-like protein; heat shock protein DnaJ domain-containing protein 2166744 5322965 Smed_2105 Sinorhizobium medicae WSM419 heat shock protein DnaJ domain-containing protein YP_001327773.1 2166037 R 366394 CDS YP_001327774.1 150397307 5322966 2167101..2168315 1 NC_009636.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; pyrophosphate--fructose-6-phosphate 1-phosphotransferase 2168315 5322966 Smed_2106 Sinorhizobium medicae WSM419 pyrophosphate--fructose-6-phosphate 1-phosphotransferase YP_001327774.1 2167101 D 366394 CDS YP_001327775.1 150397308 5322967 2168451..2169083 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc01851 putative amino acid efflux protein; lysine exporter protein LysE/YggA 2169083 5322967 Smed_2107 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001327775.1 2168451 D 366394 CDS YP_001327776.1 150397309 5322968 2169202..2170203 1 NC_009636.1 PFAM: Lytic transglycosylase catalytic; KEGG: sme:SMc01850 hypothetical protein; lytic transglycosylase 2170203 5322968 Smed_2108 Sinorhizobium medicae WSM419 lytic transglycosylase YP_001327776.1 2169202 D 366394 CDS YP_001327777.1 150397310 5322969 complement(2170245..2171606) 1 NC_009636.1 PFAM: beta-lactamase; KEGG: sme:SMc01849 putative hydrolase transmembrane protein; beta-lactamase 2171606 5322969 Smed_2109 Sinorhizobium medicae WSM419 beta-lactamase YP_001327777.1 2170245 R 366394 CDS YP_001327778.1 150397311 5322970 2171811..2173073 1 NC_009636.1 KEGG: sme:SMc01848 hypothetical protein; hypothetical protein 2173073 5322970 Smed_2110 Sinorhizobium medicae WSM419 hypothetical protein YP_001327778.1 2171811 D 366394 CDS YP_001327779.1 150397312 5322971 2173070..2173744 1 NC_009636.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc01847 putative methyltransferase protein; type 11 methyltransferase 2173744 5322971 Smed_2111 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001327779.1 2173070 D 366394 CDS YP_001327780.1 150397313 5322972 2173945..2174730 1 NC_009636.1 PFAM: glycoside hydrolase family 25; KEGG: sme:SMc01846 putative hydrolase glycosidase protein; glycoside hydrolase 2174730 5322972 Smed_2112 Sinorhizobium medicae WSM419 glycoside hydrolase YP_001327780.1 2173945 D 366394 CDS YP_001327781.1 150397314 5322973 2174863..2176080 1 NC_009636.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sme:SMc01845 putative transglycosylase transmembrane protein; lytic murein transglycosylase 2176080 5322973 Smed_2113 Sinorhizobium medicae WSM419 lytic murein transglycosylase YP_001327781.1 2174863 D 366394 CDS YP_001327782.1 150397315 5322974 2176299..2177243 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc01844 hypothetical protein; hypothetical protein 2177243 5322974 Smed_2114 Sinorhizobium medicae WSM419 hypothetical protein YP_001327782.1 2176299 D 366394 CDS YP_001327783.1 150397316 5322975 complement(2177773..2178714) 1 NC_009636.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; KEGG: sme:SMc01843 probable 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; 5,10-methylenetetrahydrofolate reductase 2178714 5322975 Smed_2115 Sinorhizobium medicae WSM419 5,10-methylenetetrahydrofolate reductase YP_001327783.1 2177773 R 366394 CDS YP_001327784.1 150397317 5322976 complement(2178717..2179739) 1 NC_009636.1 PFAM: regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc01842 putative methyltransferase transcription regulator protein; type 11 methyltransferase 2179739 5322976 Smed_2116 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001327784.1 2178717 R 366394 CDS YP_001327785.1 150397318 5322977 complement(2180219..2181868) 1 NC_009636.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2181868 5322977 Smed_2117 Sinorhizobium medicae WSM419 putative ABC transporter ATP-binding protein YP_001327785.1 2180219 R 366394 CDS YP_001327786.1 150397319 5322978 complement(2181993..2182763) 1 NC_009636.1 KEGG: sme:SMc02819 putative ribonuclease protein; putative ribonuclease 2182763 5322978 Smed_2118 Sinorhizobium medicae WSM419 putative ribonuclease YP_001327786.1 2181993 R 366394 CDS YP_001327787.1 150397320 5322979 2182964..2183908 1 NC_009636.1 KEGG: sme:SMc02818 hypothetical protein; hypothetical protein 2183908 5322979 Smed_2119 Sinorhizobium medicae WSM419 hypothetical protein YP_001327787.1 2182964 D 366394 CDS YP_001327788.1 150397321 5322980 2183905..2184858 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02817 hypothetical protein; hypothetical protein 2184858 5322980 Smed_2120 Sinorhizobium medicae WSM419 hypothetical protein YP_001327788.1 2183905 D 366394 CDS YP_001327789.1 150397322 5322981 2184895..2186541 1 NC_009636.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; also known as acetolactate synthase large subunit; thiamine pyrophosphate protein 2186541 5322981 Smed_2121 Sinorhizobium medicae WSM419 thiamine pyrophosphate protein YP_001327789.1 2184895 D 366394 CDS YP_001327790.1 150397323 5322982 2186879..2187811 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 2187811 5322982 Smed_2122 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001327790.1 2186879 D 366394 CDS YP_001327791.1 150397324 5322983 complement(2187984..2188322) 1 NC_009636.1 PFAM: protein of unknown function DUF442; KEGG: sme:SMc01573 hypothetical protein; hypothetical protein 2188322 5322983 Smed_2123 Sinorhizobium medicae WSM419 hypothetical protein YP_001327791.1 2187984 R 366394 CDS YP_001327792.1 150397325 5322984 complement(2188394..2189323) 1 NC_009636.1 KEGG: sme:SMc01574 hypothetical protein; hypothetical protein 2189323 5322984 Smed_2124 Sinorhizobium medicae WSM419 hypothetical protein YP_001327792.1 2188394 R 366394 CDS YP_001327793.1 150397326 5322985 2189393..2190784 1 NC_009636.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc01575 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2190784 5322985 Smed_2125 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001327793.1 2189393 D 366394 CDS YP_001327794.1 150397327 5322986 2190938..2192227 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc01576 putative oxidoreductase protein; FAD dependent oxidoreductase 2192227 5322986 Smed_2126 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001327794.1 2190938 D 366394 CDS YP_001327795.1 150397328 5322987 complement(2192252..2192968) 1 NC_009636.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sme:SMc01579 hypothetical protein; cobyrinic acid ac-diamide synthase 2192968 5322987 Smed_2127 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001327795.1 2192252 R 366394 CDS YP_001327796.1 150397329 5322988 complement(2193177..2194322) 1 NC_009636.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sme:SMc01582 putative alcohol dehydrogenase protein; iron-containing alcohol dehydrogenase 2194322 5322988 Smed_2128 Sinorhizobium medicae WSM419 iron-containing alcohol dehydrogenase YP_001327796.1 2193177 R 366394 CDS YP_001327797.1 150397330 5322989 complement(2194319..2195704) 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMc01588 putative aldehyde dehydrogenase protein; aldehyde dehydrogenase 2195704 5322989 Smed_2129 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001327797.1 2194319 R 366394 CDS YP_001327798.1 150397331 5322990 complement(2195785..2197149) 1 NC_009636.1 PFAM: glutamine synthetase catalytic region; KEGG: sme:SMc01594 probable glutamine synthetase; glutamine synthetase 2197149 5322990 Smed_2130 Sinorhizobium medicae WSM419 glutamine synthetase YP_001327798.1 2195785 R 366394 CDS YP_001327799.1 150397332 5322991 complement(2197238..2198785) 1 NC_009636.1 PFAM: amino acid permease-associated region; KEGG: sme:SMc01597 putative amino-acid permease protein; amino acid permease-associated protein 2198785 5322991 Smed_2131 Sinorhizobium medicae WSM419 amino acid permease-associated protein YP_001327799.1 2197238 R 366394 CDS YP_001327800.1 150397333 5322992 complement(2198892..2199665) 1 NC_009636.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sme:SMc01600 hypothetical protein; N-formylglutamate amidohydrolase 2199665 5322992 Smed_2132 Sinorhizobium medicae WSM419 N-formylglutamate amidohydrolase YP_001327800.1 2198892 R 366394 CDS YP_001327801.1 150397334 5322993 2199873..2200751 1 NC_009636.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMc01602 hypothetical protein; RpiR family transcriptional regulator 2200751 5322993 Smed_2133 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001327801.1 2199873 D 366394 CDS YP_001327802.1 150397335 5322994 2200942..2202036 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01605 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 2202036 5322994 Smed_2134 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327802.1 2200942 D 366394 CDS YP_001327803.1 150397336 5322995 2202112..2202993 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01606 putative permease protein; binding-protein-dependent transport system inner membrane protein 2202993 5322995 Smed_2135 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327803.1 2202112 D 366394 CDS YP_001327804.1 150397337 5322996 2202990..2203778 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01607 putative permease protein; binding-protein-dependent transport system inner membrane protein 2203778 5322996 Smed_2136 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327804.1 2202990 D 366394 CDS YP_001327805.1 150397338 5322997 2203783..2204844 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01608 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2204844 5322997 Smed_2137 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327805.1 2203783 D 366394 CDS YP_001327806.1 150397339 5322998 2205159..2205686 1 NC_009636.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 2205686 5322998 Smed_2138 Sinorhizobium medicae WSM419 riboflavin synthase subunit beta YP_001327806.1 2205159 D 366394 CDS YP_001327807.1 150397340 5322999 2205851..2206735 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01610 putative transcription regulator protein; helix-turn-helix domain-containing protein 2206735 5322999 Smed_2139 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001327807.1 2205851 D 366394 CDS YP_001327808.1 150397341 5323000 2206897..2209119 1 NC_009636.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01611 putative ferrichrome-iron receptor precursor protein; ferrichrome receptor protein 2209119 5323000 Smed_2140 Sinorhizobium medicae WSM419 ferrichrome receptor protein YP_001327808.1 2206897 D 366394 CDS YP_001327809.1 150397342 5323001 2209241..2210374 1 NC_009636.1 PFAM: creatinase; peptidase M24; KEGG: bms:BR1062 proline dipeptidase; peptidase M24 2210374 5323001 Smed_2141 Sinorhizobium medicae WSM419 peptidase M24 YP_001327809.1 2209241 D 366394 CDS YP_001327810.1 150397343 5323002 complement(2210400..2211497) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:pRL100267 putative ATP-binding component of ABC transporter; ABC transporter-like protein 2211497 5323002 Smed_2142 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327810.1 2210400 R 366394 CDS YP_001327811.1 150397344 5323003 complement(2211507..2213453) 1 NC_009636.1 PFAM: protein of unknown function DUF1680; KEGG: rle:pRL100266 hypothetical protein; hypothetical protein 2213453 5323003 Smed_2143 Sinorhizobium medicae WSM419 hypothetical protein YP_001327811.1 2211507 R 366394 CDS YP_001327812.1 150397345 5323004 complement(2213481..2214347) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100265 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 2214347 5323004 Smed_2144 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327812.1 2213481 R 366394 CDS YP_001327813.1 150397346 5323005 complement(2214344..2215432) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100264 putative permease component of ABC transporter; binding-protein-dependent transport system inner membrane protein 2215432 5323005 Smed_2145 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327813.1 2214344 R 366394 CDS YP_001327814.1 150397347 5323006 complement(2215395..2216639) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100263 putative substrate-binding component of ABC transporter; extracellular solute-binding protein 2216639 5323006 Smed_2146 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327814.1 2215395 R 366394 CDS YP_001327815.1 150397348 5323007 2216810..2217832 1 NC_009636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rle:pRL100262 putative transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 2217832 5323007 Smed_2147 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001327815.1 2216810 D 366394 CDS YP_001327816.1 150397349 5323008 2217863..2218510 1 NC_009636.1 KEGG: sme:SMa0370 hypothetical protein; hypothetical protein 2218510 5323008 Smed_2148 Sinorhizobium medicae WSM419 hypothetical protein YP_001327816.1 2217863 D 366394 CDS YP_001327817.1 150397350 5323009 complement(2218647..2219084) 1 NC_009636.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 2219084 5323009 Smed_2149 Sinorhizobium medicae WSM419 ribose-5-phosphate isomerase B YP_001327817.1 2218647 R 366394 CDS YP_001327818.1 150397351 5323010 complement(2219125..2219892) 1 NC_009636.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2219892 tpiA 5323010 tpiA Sinorhizobium medicae WSM419 triosephosphate isomerase YP_001327818.1 2219125 R 366394 CDS YP_001327819.1 150397352 5323011 complement(2219889..2220674) 1 NC_009636.1 PFAM: regulatory protein DeoR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMc01615 putative transcription regulator protein; DeoR family transcriptional regulator 2220674 5323011 Smed_2151 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001327819.1 2219889 R 366394 CDS YP_001327820.1 150397353 5323012 complement(2220779..2221708) 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc01616 putative D-erythrulose-1-phosphate dehydrogenase protein; xylose isomerase domain-containing protein 2221708 5323012 Smed_2152 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001327820.1 2220779 R 366394 CDS YP_001327821.1 150397354 5323013 complement(2221722..2222567) 1 NC_009636.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc01617 hypothetical protein; HAD family hydrolase 2222567 5323013 Smed_2153 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001327821.1 2221722 R 366394 CDS YP_001327822.1 150397355 5323014 complement(2222564..2223847) 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc01618 putative carbohydrate kinase protein; carbohydrate kinase FGGY 2223847 5323014 Smed_2154 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001327822.1 2222564 R 366394 CDS YP_001327823.1 150397356 5323015 complement(2223844..2224899) 1 NC_009636.1 PFAM: class II aldolase/adducin family protein; KEGG: sme:SMc01619 hypothetical protein; class II aldolase/adducin family protein 2224899 5323015 Smed_2155 Sinorhizobium medicae WSM419 class II aldolase/adducin family protein YP_001327823.1 2223844 R 366394 CDS YP_001327824.1 150397357 5323016 complement(2224913..2226466) 1 NC_009636.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 2226466 5323016 Smed_2156 Sinorhizobium medicae WSM419 glycerol-3-phosphate dehydrogenase YP_001327824.1 2224913 R 366394 CDS YP_001327825.1 150397358 5323017 complement(2226471..2227139) 1 NC_009636.1 PFAM: class II aldolase/adducin family protein; KEGG: sme:SMc01621 putative L-fuculose phosphate aldolase protein; class II aldolase/adducin family protein 2227139 5323017 Smed_2157 Sinorhizobium medicae WSM419 class II aldolase/adducin family protein YP_001327825.1 2226471 R 366394 CDS YP_001327826.1 150397359 5323018 complement(2227149..2228186) 1 NC_009636.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc01622 putative phosphoglycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2228186 5323018 Smed_2158 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001327826.1 2227149 R 366394 CDS YP_001327827.1 150397360 5323019 complement(2228183..2229760) 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc01623 putative erythritol kinase protein; carbohydrate kinase FGGY 2229760 5323019 Smed_2159 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001327827.1 2228183 R 366394 CDS YP_001327828.1 150397361 5323020 complement(2229760..2230884) 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01624 putative ABC transporter ATP-binding protein; ABC transporter-like protein 2230884 5323020 Smed_2160 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327828.1 2229760 R 366394 CDS YP_001327829.1 150397362 5323021 complement(2230881..2231999) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01625 putative ABC transporter ATP-binding protein; ABC transporter-like protein 2231999 5323021 Smed_2161 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327829.1 2230881 R 366394 CDS YP_001327830.1 150397363 5323022 complement(2232004..2232861) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01626 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2232861 5323022 Smed_2162 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327830.1 2232004 R 366394 CDS YP_001327831.1 150397364 5323023 complement(2232873..2233796) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01627 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2233796 5323023 Smed_2163 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327831.1 2232873 R 366394 CDS YP_001327832.1 150397365 5323024 complement(2233979..2235424) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01628 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 2235424 5323024 Smed_2164 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327832.1 2233979 R 366394 CDS YP_001327833.1 150397366 5323025 complement(2235539..2236576) 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: sme:SMc01629 putative ery operon repressor transcription regulator protein; DeoR family transcriptional regulator 2236576 5323025 Smed_2165 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001327833.1 2235539 R 366394 CDS YP_001327834.1 150397367 5323026 complement(2236676..2237419) 1 NC_009636.1 PFAM: regulatory protein LuxR; KEGG: sme:SMc01630 putative transcription regulator protein; response regulator receiver protein 2237419 5323026 Smed_2166 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001327834.1 2236676 R 366394 CDS YP_001327835.1 150397368 5323027 2237663..2238742 1 NC_009636.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01631 probable ATP-binding ABC transporter protein; spermidine/putrescine ABC transporter ATPase 2238742 5323027 Smed_2167 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase YP_001327835.1 2237663 D 366394 CDS YP_001327836.1 150397369 5323028 2238792..2239952 1 NC_009636.1 KEGG: sme:SMc01632 putative periplasmic binding ABC transporter protein; putative periplasmic binding ABC transporter protein 2239952 5323028 Smed_2168 Sinorhizobium medicae WSM419 putative periplasmic binding ABC transporter protein YP_001327836.1 2238792 D 366394 CDS YP_001327837.1 150397370 5323029 2240015..2240929 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01633 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2240929 5323029 Smed_2169 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327837.1 2240015 D 366394 CDS YP_001327838.1 150397371 5323030 2240929..2241747 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01634 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2241747 5323030 Smed_2170 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327838.1 2240929 D 366394 CDS YP_001327839.1 150397372 5323031 2241752..2242513 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc01635 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2242513 5323031 Smed_2171 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327839.1 2241752 D 366394 CDS YP_001327840.1 150397373 5323032 complement(2242627..2243616) 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01636 putative transcription regulator protein; helix-turn-helix domain-containing protein 2243616 5323032 Smed_2172 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001327840.1 2242627 R 366394 CDS YP_001327841.1 150397374 5323033 2243708..2244610 1 NC_009636.1 PFAM: protein of unknown function DUF849; KEGG: sme:SMc01637 hypothetical protein; hypothetical protein 2244610 5323033 Smed_2173 Sinorhizobium medicae WSM419 hypothetical protein YP_001327841.1 2243708 D 366394 CDS YP_001327842.1 150397375 5323034 2244802..2246292 1 NC_009636.1 Converts (S)-3-hydroxyacyl-CoA to 3-oxyacyl-CoA; may also act as a thioesterase; bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase 2246292 5323034 Smed_2174 Sinorhizobium medicae WSM419 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase YP_001327842.1 2244802 D 366394 CDS YP_001327843.1 150397376 5323035 2246380..2247540 1 NC_009636.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sme:SMc01639 putative acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2247540 5323035 Smed_2175 Sinorhizobium medicae WSM419 acyl-CoA dehydrogenase domain-containing protein YP_001327843.1 2246380 D 366394 CDS YP_001327844.1 150397377 5323036 2247644..2249707 1 NC_009636.1 PFAM: CoA-binding domain protein; KEGG: sme:SMc01640 putative acyl-CoA synthetase protein; CoA-binding domain-containing protein 2249707 5323036 Smed_2176 Sinorhizobium medicae WSM419 CoA-binding domain-containing protein YP_001327844.1 2247644 D 366394 CDS YP_001327845.1 150397378 5323037 2249712..2250494 1 NC_009636.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase 2250494 5323037 Smed_2177 Sinorhizobium medicae WSM419 carnitinyl-CoA dehydratase YP_001327845.1 2249712 D 366394 CDS YP_001327846.1 150397379 5323038 2250833..2252422 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01642 putative periplasmic binding protein; extracellular solute-binding protein 2252422 5323038 Smed_2178 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327846.1 2250833 D 366394 CDS YP_001327847.1 150397380 5323039 2252422..2253531 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01643 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2253531 5323039 Smed_2179 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327847.1 2252422 D 366394 CDS YP_001327848.1 150397381 5323040 2253528..2254355 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01644 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2254355 5323040 Smed_2180 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327848.1 2253528 D 366394 CDS YP_001327849.1 150397382 5323041 2254348..2255979 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01645 putative ABC transporter ATP-binding protein; ABC transporter-like protein 2255979 5323041 Smed_2181 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327849.1 2254348 D 366394 CDS YP_001327850.1 150397383 5323042 complement(2256125..2256919) 1 NC_009636.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc01646 hypothetical protein; putative transcriptional regulator 2256919 5323042 Smed_2182 Sinorhizobium medicae WSM419 putative transcriptional regulator YP_001327850.1 2256125 R 366394 CDS YP_001327851.1 150397384 5323043 2257047..2258636 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01647 putative periplasmic binding protein; extracellular solute-binding protein 2258636 5323043 Smed_2183 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327851.1 2257047 D 366394 CDS YP_001327852.1 150397385 5323044 2258719..2260716 1 NC_009636.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: sme:SMc01648 hypothetical protein; peptidase S15 2260716 5323044 Smed_2184 Sinorhizobium medicae WSM419 peptidase S15 YP_001327852.1 2258719 D 366394 CDS YP_001327853.1 150397386 5323045 complement(2260768..2261706) 1 NC_009636.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sme:SMc01650 putative esterase/lipase protein; alpha/beta hydrolase domain-containing protein 2261706 5323045 Smed_2185 Sinorhizobium medicae WSM419 alpha/beta hydrolase domain-containing protein YP_001327853.1 2260768 R 366394 CDS YP_001327854.1 150397387 5323046 2261833..2262741 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01651 putative transcription regulator protein; LysR family transcriptional regulator 2262741 5323046 Smed_2186 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327854.1 2261833 D 366394 CDS YP_001327855.1 150397388 5323047 2262860..2264020 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01652 putative ABC transporter protein; extracellular solute-binding protein 2264020 5323047 Smed_2187 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327855.1 2262860 D 366394 CDS YP_001327856.1 150397389 5323048 2264202..2265197 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01653 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2265197 5323048 Smed_2188 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327856.1 2264202 D 366394 CDS YP_001327857.1 150397390 5323049 2265194..2266144 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01654 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2266144 5323049 Smed_2189 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327857.1 2265194 D 366394 CDS YP_001327858.1 150397391 5323050 2266134..2266949 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01655 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2266949 5323050 Smed_2190 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327858.1 2266134 D 366394 CDS YP_001327859.1 150397392 5323051 2266976..2268403 1 NC_009636.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 2268403 5323051 Smed_2191 Sinorhizobium medicae WSM419 gamma-aminobutyraldehyde dehydrogenase YP_001327859.1 2266976 D 366394 CDS YP_001327860.1 150397393 5323052 2268614..2270788 1 NC_009636.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01657 putative ferrichrome-iron receptor precursor protein; ferrioxamine B receptor protein 2270788 5323052 Smed_2192 Sinorhizobium medicae WSM419 ferrioxamine B receptor protein YP_001327860.1 2268614 D 366394 CDS YP_001327861.1 150397394 5323053 2270794..2271549 1 NC_009636.1 PFAM: ferric iron reductase; KEGG: sme:SMc01658 putative transport protein; ferric iron reductase 2271549 5323053 Smed_2193 Sinorhizobium medicae WSM419 ferric iron reductase YP_001327861.1 2270794 D 366394 CDS YP_001327862.1 150397395 5323054 2271552..2272685 1 NC_009636.1 PFAM: periplasmic binding protein; KEGG: sme:SMc01659 putative transport transmembrane protein; ferrichrome/ferrioxamine B periplasmic transporter 2272685 5323054 Smed_2194 Sinorhizobium medicae WSM419 ferrichrome/ferrioxamine B periplasmic transporter YP_001327862.1 2271552 D 366394 CDS YP_001327863.1 150397396 5323055 2272802..2273323 1 NC_009636.1 KEGG: sme:SMc01660 hypothetical protein; hypothetical protein 2273323 5323055 Smed_2195 Sinorhizobium medicae WSM419 hypothetical protein YP_001327863.1 2272802 D 366394 CDS YP_001327864.1 150397397 5323056 complement(2273420..2274967) 1 NC_009636.1 PFAM: trimethylamine methyltransferase; KEGG: sme:SMc01661 putative methyltransferase protein; trimethylamine methyltransferase 2274967 5323056 Smed_2196 Sinorhizobium medicae WSM419 trimethylamine methyltransferase YP_001327864.1 2273420 R 366394 CDS YP_001327865.1 150397398 5323057 complement(2275109..2277556) 1 NC_009636.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc01662 putative sarcosine dehydrogenase; FAD dependent oxidoreductase 2277556 5323057 Smed_2197 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001327865.1 2275109 R 366394 CDS YP_001327866.1 150397399 5323058 complement(2277553..2280000) 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc01663 putative dimethylglycine dehydrogenase precursor; FAD dependent oxidoreductase 2280000 5323058 Smed_2198 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001327866.1 2277553 R 366394 CDS YP_001327867.1 150397400 5323059 2280123..2280968 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01664 putative transcription regulator protein; LysR family transcriptional regulator 2280968 5323059 Smed_2199 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327867.1 2280123 D 366394 CDS YP_001327868.1 150397401 5323060 complement(2281006..2282685) 1 NC_009636.1 KEGG: sme:SMc01665 hypothetical protein; hypothetical protein 2282685 5323060 Smed_2200 Sinorhizobium medicae WSM419 hypothetical protein YP_001327868.1 2281006 R 366394 CDS YP_001327869.1 150397402 5323061 2282883..2284166 1 NC_009636.1 catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; methionine gamma-lyase 2284166 5323061 Smed_2201 Sinorhizobium medicae WSM419 methionine gamma-lyase YP_001327869.1 2282883 D 366394 CDS YP_001327870.1 150397403 5323062 complement(2284287..2284583) 1 NC_009636.1 SMART: helix-turn-helix domain protein; KEGG: rru:Rru_A3065 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 2284583 5323062 Smed_2202 Sinorhizobium medicae WSM419 helix-turn-helix domain-containing protein YP_001327870.1 2284287 R 366394 CDS YP_001327871.1 150397404 5323064 complement(2285035..2285394) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01667 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2285394 5323064 Smed_2204 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001327871.1 2285035 R 366394 CDS YP_001327872.1 150397405 5323065 complement(2285391..2285999) 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc01668 putative transcription regulator protein; TetR family transcriptional regulator 2285999 5323065 Smed_2205 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001327872.1 2285391 R 366394 CDS YP_001327873.1 150397406 5323066 2286083..2286874 1 NC_009636.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2286874 5323066 Smed_2206 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001327873.1 2286083 D 366394 CDS YP_001327874.1 150397407 5323067 complement(2286888..2287367) 1 NC_009636.1 KEGG: sme:SMc01670 hypothetical transmembrane protein; hypothetical protein 2287367 5323067 Smed_2207 Sinorhizobium medicae WSM419 hypothetical protein YP_001327874.1 2286888 R 366394 CDS YP_001327875.1 150397408 5323068 complement(2287417..2288730) 1 NC_009636.1 KEGG: sme:SMc01671 hypothetical protein; hypothetical protein 2288730 5323068 Smed_2208 Sinorhizobium medicae WSM419 hypothetical protein YP_001327875.1 2287417 R 366394 CDS YP_001327876.1 150397409 5323069 2288962..2289756 1 NC_009636.1 PFAM: protein of unknown function DUF1194; KEGG: ret:RHE_CH02690 hypothetical protein; hypothetical protein 2289756 5323069 Smed_2209 Sinorhizobium medicae WSM419 hypothetical protein YP_001327876.1 2288962 D 366394 CDS YP_001327877.1 150397410 5323070 complement(2289863..2290084) 1 NC_009636.1 KEGG: sme:SMc01540 hypothetical protein; hypothetical protein 2290084 5323070 Smed_2210 Sinorhizobium medicae WSM419 hypothetical protein YP_001327877.1 2289863 R 366394 CDS YP_001327878.1 150397411 5323071 complement(2290220..2291434) 1 NC_009636.1 PFAM: protein of unknown function DUF181; KEGG: sme:SMc01541 hypothetical protein; hypothetical protein 2291434 5323071 Smed_2211 Sinorhizobium medicae WSM419 hypothetical protein YP_001327878.1 2290220 R 366394 CDS YP_001327879.1 150397412 5323072 complement(2291431..2291664) 1 NC_009636.1 KEGG: sme:SMc01542 hypothetical protein; hypothetical protein 2291664 5323072 Smed_2212 Sinorhizobium medicae WSM419 hypothetical protein YP_001327879.1 2291431 R 366394 CDS YP_001327880.1 150397413 5323073 complement(2291664..2293502) 1 NC_009636.1 KEGG: sme:SMc01543 hypothetical protein; SARP family transcriptional regulator 2293502 5323073 Smed_2213 Sinorhizobium medicae WSM419 SARP family transcriptional regulator YP_001327880.1 2291664 R 366394 CDS YP_001327881.1 150397414 5323074 2293869..2294660 1 NC_009636.1 PFAM: aminoglycoside 3-N-acetyltransferase; KEGG: sme:SMc02813 probable aminoglycoside N3'-acetyltransferase protein; aminoglycoside N(3')-acetyltransferase 2294660 5323074 Smed_2214 Sinorhizobium medicae WSM419 aminoglycoside N(3')-acetyltransferase YP_001327881.1 2293869 D 366394 CDS YP_001327882.1 150397415 5323075 complement(2294701..2294976) 1 NC_009636.1 PFAM: helix-turn-helix domain protein; KEGG: atu:Atu5113 transcriptional regulator; XRE family transcriptional regulator 2294976 5323075 Smed_2215 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001327882.1 2294701 R 366394 CDS YP_001327883.1 150397416 5323077 2295456..2296250 1 NC_009636.1 PFAM: protein of unknown function DUF541; KEGG: sme:SMc01556 hypothetical protein; hypothetical protein 2296250 5323077 Smed_2216 Sinorhizobium medicae WSM419 hypothetical protein YP_001327883.1 2295456 D 366394 CDS YP_001327884.1 150397417 5323078 complement(2296443..2296796) 1 NC_009636.1 KEGG: sme:SMc01557 hypothetical signal peptide protein; putative signal peptide protein 2296796 5323078 Smed_2217 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001327884.1 2296443 R 366394 CDS YP_001327885.1 150397418 5323079 complement(2296935..2297339) 1 NC_009636.1 PFAM: protein of unknown function DUF1486; KEGG: sme:SMc01558 hypothetical protein; hypothetical protein 2297339 5323079 Smed_2218 Sinorhizobium medicae WSM419 hypothetical protein YP_001327885.1 2296935 R 366394 CDS YP_001327886.1 150397419 5323080 complement(2297433..2297855) 1 NC_009636.1 PFAM: protein of unknown function UPF0047; KEGG: sme:SMc01559 hypothetical protein; hypothetical protein 2297855 5323080 Smed_2219 Sinorhizobium medicae WSM419 hypothetical protein YP_001327886.1 2297433 R 366394 CDS YP_001327887.1 150397420 5323081 complement(2297891..2298244) 1 NC_009636.1 PFAM: protein of unknown function DUF1428; KEGG: sme:SMc01560 hypothetical protein; hypothetical protein 2298244 5323081 Smed_2220 Sinorhizobium medicae WSM419 hypothetical protein YP_001327887.1 2297891 R 366394 CDS YP_001327888.1 150397421 5323082 complement(2298358..2298927) 1 NC_009636.1 KEGG: sme:SMc01561 putative transmembrane protein; putative transmembrane protein 2298927 5323082 Smed_2221 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001327888.1 2298358 R 366394 CDS YP_001327889.1 150397422 5323083 complement(2299152..2299445) 1 NC_009636.1 PFAM: GYD family protein; KEGG: sme:SMc01562 hypothetical protein; GYD family protein 2299445 5323083 Smed_2222 Sinorhizobium medicae WSM419 GYD family protein YP_001327889.1 2299152 R 366394 CDS YP_001327890.1 150397423 5323084 complement(2299716..2301770) 1 NC_009636.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2301770 5323084 Smed_2223 Sinorhizobium medicae WSM419 RNA polymerase sigma factor RpoD YP_001327890.1 2299716 R 366394 CDS YP_001327891.1 150397424 5323085 complement(2302218..2303252) 1 NC_009636.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 2303252 tdh 5323085 tdh Sinorhizobium medicae WSM419 L-threonine 3-dehydrogenase YP_001327891.1 2302218 R 366394 CDS YP_001327892.1 150397425 5323086 complement(2303293..2304480) 1 NC_009636.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 2304480 5323086 Smed_2225 Sinorhizobium medicae WSM419 2-amino-3-ketobutyrate coenzyme A ligase YP_001327892.1 2303293 R 366394 CDS YP_001327893.1 150397426 5323087 complement(2304702..2306645) 1 NC_009636.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc01566 probable ATP-dependent DNA helicase protein; ATP-dependent DNA helicase RecQ 2306645 5323087 Smed_2226 Sinorhizobium medicae WSM419 ATP-dependent DNA helicase RecQ YP_001327893.1 2304702 R 366394 CDS YP_001327894.1 150397427 5323088 complement(2306655..2308670) 1 NC_009636.1 synthesizes RNA primers at the replication forks; DNA primase 2308670 dnaG 5323088 dnaG Sinorhizobium medicae WSM419 DNA primase YP_001327894.1 2306655 R 366394 CDS YP_001327895.1 150397428 5323089 complement(2308865..2309314) 1 NC_009636.1 PFAM: GatB/Yqey domain protein; KEGG: sme:SMc01568 hypothetical protein; GatB/Yqey domain-containing protein 2309314 5323089 Smed_2228 Sinorhizobium medicae WSM419 GatB/Yqey domain-containing protein YP_001327895.1 2308865 R 366394 CDS YP_001327896.1 150397429 5323090 2309639..2310844 1 NC_009636.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2310844 5323090 Smed_2229 Sinorhizobium medicae WSM419 carbamoyl phosphate synthase small subunit YP_001327896.1 2309639 D 366394 CDS YP_001327897.1 150397430 5323091 complement(2310883..2311773) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01570 putative transcription regulator protein; LysR family transcriptional regulator 2311773 5323091 Smed_2230 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327897.1 2310883 R 366394 CDS YP_001327898.1 150397431 5323092 2311887..2312648 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc01571 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2312648 5323092 Smed_2231 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001327898.1 2311887 D 366394 CDS YP_001327899.1 150397432 5323093 2312675..2313541 1 NC_009636.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: sme:SMc01572 putative oxidoreductase protein; 6-phosphogluconate dehydrogenase 2313541 5323093 Smed_2232 Sinorhizobium medicae WSM419 6-phosphogluconate dehydrogenase YP_001327899.1 2312675 D 366394 CDS YP_001327900.1 150397433 5323094 complement(2313662..2314864) 1 NC_009636.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2314864 5323094 Smed_2233 Sinorhizobium medicae WSM419 aspartate aminotransferase YP_001327900.1 2313662 R 366394 CDS YP_001327901.1 150397434 5323095 2315185..2315382 1 NC_009636.1 KEGG: sme:SMc01580 hypothetical protein; hypothetical protein 2315382 5323095 Smed_2234 Sinorhizobium medicae WSM419 hypothetical protein YP_001327901.1 2315185 D 366394 CDS YP_001327902.1 150397435 5323096 2315351..2315647 1 NC_009636.1 KEGG: sme:SMc01581 hypothetical protein; hypothetical protein 2315647 5323096 Smed_2235 Sinorhizobium medicae WSM419 hypothetical protein YP_001327902.1 2315351 D 366394 CDS YP_001327903.1 150397436 5323097 2315788..2316978 1 NC_009636.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sme:SMc01583 hypothetical protein; glucose sorbosone dehydrogenase 2316978 5323097 Smed_2236 Sinorhizobium medicae WSM419 glucose sorbosone dehydrogenase YP_001327903.1 2315788 D 366394 CDS YP_001327904.1 150397437 5323098 2317161..2318063 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc01584 hypothetical protein; hypothetical protein 2318063 5323098 Smed_2237 Sinorhizobium medicae WSM419 hypothetical protein YP_001327904.1 2317161 D 366394 CDS YP_001327905.1 150397438 5323099 2318728..2318943 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sme:SMc01585 putative cold shock transcription regulator protein; cold-shock DNA-binding domain-containing protein 2318943 5323099 Smed_2238 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001327905.1 2318728 D 366394 CDS YP_001327906.1 150397439 5323100 2319088..2319504 1 NC_009636.1 KEGG: sme:SMc01586 hypothetical protein; hypothetical protein 2319504 5323100 Smed_2239 Sinorhizobium medicae WSM419 hypothetical protein YP_001327906.1 2319088 D 366394 CDS YP_001327907.1 150397440 5323101 complement(2319581..2320222) 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc01587 hypothetical protein; beta-lactamase domain-containing protein 2320222 5323101 Smed_2240 Sinorhizobium medicae WSM419 beta-lactamase domain-containing protein YP_001327907.1 2319581 R 366394 CDS YP_001327908.1 150397441 5323102 complement(2320331..2320486) 1 NC_009636.1 KEGG: sme:SMc01589 hypothetical protein; hypothetical protein 2320486 5323102 Smed_2241 Sinorhizobium medicae WSM419 hypothetical protein YP_001327908.1 2320331 R 366394 CDS YP_001327909.1 150397442 5323103 2320673..2321305 1 NC_009636.1 PFAM: protein of unknown function DUF1236; SH3 type 3 domain protein; KEGG: sme:SMc01590 hypothetical protein; hypothetical protein 2321305 5323103 Smed_2242 Sinorhizobium medicae WSM419 hypothetical protein YP_001327909.1 2320673 D 366394 CDS YP_001327910.1 150397443 5323104 2321626..2321892 1 NC_009636.1 KEGG: sme:SMc01591 hypothetical protein; hypothetical protein 2321892 5323104 Smed_2243 Sinorhizobium medicae WSM419 hypothetical protein YP_001327910.1 2321626 D 366394 CDS YP_001327911.1 150397444 5323105 2322086..2322568 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc01592 putative transcription regulator protein; MarR family transcriptional regulator 2322568 5323105 Smed_2244 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001327911.1 2322086 D 366394 CDS YP_001327912.1 150397445 5323106 2322842..2323543 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc01593 putative transcription regulator protein; two component transcriptional regulator 2323543 5323106 Smed_2245 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001327912.1 2322842 D 366394 CDS YP_001327913.1 150397446 5323107 2323543..2324961 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc01595 putative sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 2324961 5323107 Smed_2246 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001327913.1 2323543 D 366394 CDS YP_001327914.1 150397447 5323108 complement(2325063..2325404) 1 NC_009636.1 TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: sme:SMc04456 putative chaperone protein; export-related chaperone CsaA 2325404 5323108 Smed_2247 Sinorhizobium medicae WSM419 export-related chaperone CsaA YP_001327914.1 2325063 R 366394 CDS YP_001327915.1 150397448 5323109 complement(2325437..2326399) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA3124 probable transcriptional regulator; LysR family transcriptional regulator 2326399 5323109 Smed_2248 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001327915.1 2325437 R 366394 CDS YP_001327916.1 150397449 5323110 complement(2326652..2327476) 1 NC_009636.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2327476 5323110 Smed_2249 Sinorhizobium medicae WSM419 pyrroline-5-carboxylate reductase YP_001327916.1 2326652 R 366394 CDS YP_001327917.1 150397450 5323111 complement(2327478..2327978) 1 NC_009636.1 PFAM: Protein of unknown function DUF1790; KEGG: sme:SMc02678 hypothetical protein; hypothetical protein 2327978 5323111 Smed_2250 Sinorhizobium medicae WSM419 hypothetical protein YP_001327917.1 2327478 R 366394 CDS YP_001327918.1 150397451 5323112 complement(2328434..2328724) 1 NC_009636.1 PFAM: protein of unknown function DUF526; KEGG: sme:SMc03744 hypothetical protein; hypothetical protein 2328724 5323112 Smed_2251 Sinorhizobium medicae WSM419 hypothetical protein YP_001327918.1 2328434 R 366394 CDS YP_001327919.1 150397452 5323113 2328999..2329841 1 NC_009636.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2329841 5323113 Smed_2252 Sinorhizobium medicae WSM419 prolipoprotein diacylglyceryl transferase YP_001327919.1 2328999 D 366394 CDS YP_001327920.1 150397453 5323114 2329853..2330956 1 NC_009636.1 PFAM: protein of unknown function DUF185; KEGG: sme:SMc02682 hypothetical protein; hypothetical protein 2330956 5323114 Smed_2253 Sinorhizobium medicae WSM419 hypothetical protein YP_001327920.1 2329853 D 366394 CDS YP_001327921.1 150397454 5323115 2331084..2331878 1 NC_009636.1 PFAM: protein of unknown function DUF152; KEGG: sme:SMc02683 conserved hypothetical protein; hypothetical protein 2331878 5323115 Smed_2254 Sinorhizobium medicae WSM419 hypothetical protein YP_001327921.1 2331084 D 366394 CDS YP_001327922.1 150397455 5323116 2331880..2333031 1 NC_009636.1 PFAM: creatinase; peptidase M24; KEGG: sme:SMc02684 putative hydrolase/peptidase protein; peptidase M24 2333031 5323116 Smed_2255 Sinorhizobium medicae WSM419 peptidase M24 YP_001327922.1 2331880 D 366394 CDS YP_001327923.1 150397456 5323117 2333289..2334167 1 NC_009636.1 KEGG: sme:SMc02685 hypothetical protein; hypothetical protein 2334167 5323117 Smed_2256 Sinorhizobium medicae WSM419 hypothetical protein YP_001327923.1 2333289 D 366394 CDS YP_001327924.1 150397457 5323118 2334452..2335384 1 NC_009636.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2335384 5323118 Smed_2257 Sinorhizobium medicae WSM419 ribose-phosphate pyrophosphokinase YP_001327924.1 2334452 D 366394 CDS YP_001327925.1 150397458 5323119 complement(2335436..2336266) 1 NC_009636.1 KEGG: sme:SMc02687 hypothetical protein; hypothetical protein 2336266 5323119 Smed_2258 Sinorhizobium medicae WSM419 hypothetical protein YP_001327925.1 2335436 R 366394 CDS YP_001327926.1 150397459 5323120 complement(2336339..2336719) 1 NC_009636.1 PFAM: protein of unknown function DUF779; KEGG: sme:SMc02688 hypothetical protein; hypothetical protein 2336719 5323120 Smed_2259 Sinorhizobium medicae WSM419 hypothetical protein YP_001327926.1 2336339 R 366394 CDS YP_001327927.1 150397460 5323121 complement(2336801..2338309) 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMc02689 probable aldehyde dehydrogenase protein; aldehyde dehydrogenase 2338309 5323121 Smed_2260 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001327927.1 2336801 R 366394 CDS YP_001327928.1 150397461 5323122 complement(2338448..2339404) 1 NC_009636.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: sme:SMc02690 hypothetical protein; Fis family transcriptional regulator 2339404 5323122 Smed_2261 Sinorhizobium medicae WSM419 Fis family transcriptional regulator YP_001327928.1 2338448 R 366394 CDS YP_001327929.1 150397462 5323123 2339662..2340894 1 NC_009636.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: sme:SMc02691 putative membrane transport protein; benzoate transporter 2340894 5323123 Smed_2262 Sinorhizobium medicae WSM419 benzoate transporter YP_001327929.1 2339662 D 366394 CDS YP_001327930.1 150397463 5323124 2341107..2341730 1 NC_009636.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 2341730 5323124 Smed_2263 Sinorhizobium medicae WSM419 50S ribosomal protein L25/general stress protein Ctc YP_001327930.1 2341107 D 366394 CDS YP_001327931.1 150397464 5323125 2342028..2342774 1 NC_009636.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2342774 5323125 Smed_2264 Sinorhizobium medicae WSM419 peptidyl-tRNA hydrolase YP_001327931.1 2342028 D 366394 CDS YP_001327932.1 150397465 5323126 complement(2342797..2343102) 1 NC_009636.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 2343102 clpS 5323126 clpS Sinorhizobium medicae WSM419 ATP-dependent Clp protease adaptor YP_001327932.1 2342797 R 366394 CDS YP_001327933.1 150397466 5323127 2343331..2344434 1 NC_009636.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2344434 5323127 Smed_2266 Sinorhizobium medicae WSM419 GTP-dependent nucleic acid-binding protein EngD YP_001327933.1 2343331 D 366394 CDS YP_001327934.1 150397467 5323128 complement(2344465..2345523) 1 NC_009636.1 KEGG: ret:RHE_CH03032 hypothetical protein; hypothetical protein 2345523 5323128 Smed_2267 Sinorhizobium medicae WSM419 hypothetical protein YP_001327934.1 2344465 R 366394 CDS YP_001327935.1 150397468 5323129 2345792..2346247 1 NC_009636.1 PFAM: MaoC domain protein dehydratase; KEGG: sme:SMc02696 hypothetical protein; dehydratase 2346247 5323129 Smed_2268 Sinorhizobium medicae WSM419 dehydratase YP_001327935.1 2345792 D 366394 CDS YP_001327936.1 150397469 5323130 2346244..2346714 1 NC_009636.1 PFAM: MaoC domain protein dehydratase; KEGG: sme:SMc02697 hypothetical protein; dehydratase 2346714 5323130 Smed_2269 Sinorhizobium medicae WSM419 dehydratase YP_001327936.1 2346244 D 366394 CDS YP_001327937.1 150397470 5323131 complement(2346736..2347278) 1 NC_009636.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2347278 5323131 Smed_2270 Sinorhizobium medicae WSM419 adenine phosphoribosyltransferase YP_001327937.1 2346736 R 366394 CDS YP_001327938.1 150397471 5323132 2347452..2347637 1 NC_009636.1 KEGG: sme:SMc02699 hypothetical protein; hypothetical protein 2347637 5323132 Smed_2271 Sinorhizobium medicae WSM419 hypothetical protein YP_001327938.1 2347452 D 366394 CDS YP_001327939.1 150397472 5323133 complement(2347670..2348929) 1 NC_009636.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: sme:SMc02700 tRNA nucleotidyltransferase (CCA-adding enzyme); polynucleotide adenylyltransferase 2348929 5323133 Smed_2272 Sinorhizobium medicae WSM419 polynucleotide adenylyltransferase YP_001327939.1 2347670 R 366394 CDS YP_001327940.1 150397473 5323134 complement(2348926..2349558) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc02701 hypothetical protein; NUDIX hydrolase 2349558 5323134 Smed_2273 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001327940.1 2348926 R 366394 CDS YP_001327941.1 150397474 5323135 complement(2349555..2350178) 1 NC_009636.1 PFAM: protein of unknown function DUF1285; KEGG: sme:SMc02702 hypothetical protein; hypothetical protein 2350178 5323135 Smed_2274 Sinorhizobium medicae WSM419 hypothetical protein YP_001327941.1 2349555 R 366394 CDS YP_001327942.1 150397475 5323136 2350541..2351554 1 NC_009636.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sme:SMc02703 methanol dehydrogenase regulatory protein; ATPase 2351554 5323136 Smed_2275 Sinorhizobium medicae WSM419 ATPase YP_001327942.1 2350541 D 366394 CDS YP_001327943.1 150397476 5323137 2351558..2352478 1 NC_009636.1 PFAM: protein of unknown function DUF58; KEGG: sme:SMc02704 hypothetical protein; hypothetical protein 2352478 5323137 Smed_2276 Sinorhizobium medicae WSM419 hypothetical protein YP_001327943.1 2351558 D 366394 CDS YP_001327944.1 150397477 5323138 2352475..2355288 1 NC_009636.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: sme:SMc02705 hypothetical protein; hypothetical protein 2355288 5323138 Smed_2277 Sinorhizobium medicae WSM419 hypothetical protein YP_001327944.1 2352475 D 366394 CDS YP_001327945.1 150397478 5323139 2355299..2357368 1 NC_009636.1 KEGG: sme:SMc02706 hypothetical protein; hypothetical protein 2357368 5323139 Smed_2278 Sinorhizobium medicae WSM419 hypothetical protein YP_001327945.1 2355299 D 366394 CDS YP_001327946.1 150397479 5323140 2357347..2357838 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01545 hypothetical protein; N-acetyltransferase GCN5 2357838 5323140 Smed_2279 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327946.1 2357347 D 366394 CDS YP_001327947.1 150397480 5323141 complement(2357839..2358399) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc02707 hypothetical protein; N-acetyltransferase GCN5 2358399 5323141 Smed_2280 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327947.1 2357839 R 366394 CDS YP_001327948.1 150397481 5323142 2358655..2359647 1 NC_009636.1 KEGG: sme:SMc02708 putative glutathione S-transferase; putative glutathione S-transferase 2359647 5323142 Smed_2281 Sinorhizobium medicae WSM419 putative glutathione S-transferase YP_001327948.1 2358655 D 366394 CDS YP_001327949.1 150397482 5323143 complement(2359658..2360149) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc02711 hypothetical protein; NUDIX hydrolase 2360149 5323143 Smed_2282 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001327949.1 2359658 R 366394 CDS YP_001327950.1 150397483 5323144 2360230..2361132 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc02712 hypothetical protein; metallophosphoesterase 2361132 5323144 Smed_2283 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001327950.1 2360230 D 366394 CDS YP_001327951.1 150397484 5323145 2361258..2361827 1 NC_009636.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc02713 putative RNA polymerase sigma-E factor (sigma-24) protein; ECF subfamily RNA polymerase sigma-24 factor 2361827 5323145 Smed_2284 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001327951.1 2361258 D 366394 CDS YP_001327952.1 150397485 5323146 2361831..2362658 1 NC_009636.1 KEGG: sme:SMc02714 hypothetical protein; putative transmembrane anti-sigma factor 2362658 5323146 Smed_2285 Sinorhizobium medicae WSM419 putative transmembrane anti-sigma factor YP_001327952.1 2361831 D 366394 CDS YP_001327953.1 150397486 5323147 complement(2363011..2363262) 1 NC_009636.1 PFAM: Rv0623 family protein transcription factor; KEGG: sme:SMc02716 conserved hypothetical protein; transcription factor 2363262 5323147 Smed_2286 Sinorhizobium medicae WSM419 transcription factor YP_001327953.1 2363011 R 366394 CDS YP_001327954.1 150397487 5323148 complement(2363312..2365042) 1 NC_009636.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: sme:SMc02717 2-isopropylmalate synthase; 2-isopropylmalate synthase 2365042 5323148 Smed_2287 Sinorhizobium medicae WSM419 2-isopropylmalate synthase YP_001327954.1 2363312 R 366394 CDS YP_001327955.1 150397488 5323149 complement(2365059..2365280) 1 NC_009636.1 KEGG: sme:SMc02718 hypothetical/unknown protein; hypothetical protein 2365280 5323149 Smed_2288 Sinorhizobium medicae WSM419 hypothetical protein YP_001327955.1 2365059 R 366394 CDS YP_001327956.1 150397489 5323150 complement(2365456..2366043) 1 NC_009636.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2366043 5323150 Smed_2289 Sinorhizobium medicae WSM419 ATP-dependent Clp protease proteolytic subunit YP_001327956.1 2365456 R 366394 CDS YP_001327957.1 150397490 5323151 2366234..2366812 1 NC_009636.1 PFAM: HupE/UreJ protein; KEGG: atc:AGR_C_4126 hupe protein precursor; HupE/UreJ protein 2366812 5323151 Smed_2290 Sinorhizobium medicae WSM419 HupE/UreJ protein YP_001327957.1 2366234 D 366394 CDS YP_001327958.1 150397491 5323152 2366812..2367318 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rle:RL2080 putative acetyltransferase; N-acetyltransferase GCN5 2367318 5323152 Smed_2291 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001327958.1 2366812 D 366394 CDS YP_001327959.1 150397492 5323153 complement(2367285..2368106) 1 NC_009636.1 PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc02722 putative aminoglycoside 3'-phosphotransferase protein; aminoglycoside phosphotransferase 2368106 5323153 Smed_2292 Sinorhizobium medicae WSM419 aminoglycoside phosphotransferase YP_001327959.1 2367285 R 366394 CDS YP_001327960.1 150397493 5323154 complement(2368135..2368599) 1 NC_009636.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2368599 5323154 Smed_2293 Sinorhizobium medicae WSM419 7-cyano-7-deazaguanine reductase YP_001327960.1 2368135 R 366394 CDS YP_001327961.1 150397494 5323155 complement(2368596..2369516) 1 NC_009636.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc02724 hypothetical protein; cation diffusion facilitator family transporter 2369516 5323155 Smed_2294 Sinorhizobium medicae WSM419 cation diffusion facilitator family transporter YP_001327961.1 2368596 R 366394 CDS YP_001327962.1 150397495 5323156 complement(2369676..2371865) 1 NC_009636.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 2371865 5323156 Smed_2295 Sinorhizobium medicae WSM419 anthranilate synthase YP_001327962.1 2369676 R 366394 CDS YP_001327963.1 150397496 5323157 complement(2372143..2374347) 1 NC_009636.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc02726 putative iron transport protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor 2374347 5323157 Smed_2296 Sinorhizobium medicae WSM419 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_001327963.1 2372143 R 366394 CDS YP_001327964.1 150397497 5323158 2374629..2375471 1 NC_009636.1 PFAM: Extensin family protein; KEGG: sme:SMc02727 hypothetical protein; extensin family protein 2375471 5323158 Smed_2297 Sinorhizobium medicae WSM419 extensin family protein YP_001327964.1 2374629 D 366394 CDS YP_001327965.2 229577668 5323159 complement(2375519..2377198) 1 NC_009636.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 2377198 5323159 Smed_2298 Sinorhizobium medicae WSM419 formate--tetrahydrofolate ligase YP_001327965.2 2375519 R 366394 CDS YP_001327966.1 150397499 5323160 complement(2377283..2378503) 1 NC_009636.1 KEGG: sme:SMc02729 hypothetical protein; hypothetical protein 2378503 5323160 Smed_2299 Sinorhizobium medicae WSM419 hypothetical protein YP_001327966.1 2377283 R 366394 CDS YP_001327967.1 150397500 5323161 complement(2378507..2379796) 1 NC_009636.1 KEGG: sme:SMc02730 hypothetical protein; hypothetical protein 2379796 5323161 Smed_2300 Sinorhizobium medicae WSM419 hypothetical protein YP_001327967.1 2378507 R 366394 CDS YP_001327968.1 150397501 5323162 complement(2379793..2380233) 1 NC_009636.1 PFAM: protein of unknown function DUF559; KEGG: sme:SMc02732 hypothetical protein; hypothetical protein 2380233 5323162 Smed_2301 Sinorhizobium medicae WSM419 hypothetical protein YP_001327968.1 2379793 R 366394 CDS YP_001327969.1 150397502 5323163 complement(2380411..2382327) 1 NC_009636.1 KEGG: sme:SMc02733 hypothetical protein; hypothetical protein 2382327 5323163 Smed_2302 Sinorhizobium medicae WSM419 hypothetical protein YP_001327969.1 2380411 R 366394 CDS YP_001327970.1 150397503 5323164 complement(2382331..2383479) 1 NC_009636.1 KEGG: sme:SMc02734 hypothetical protein; hypothetical protein 2383479 5323164 Smed_2303 Sinorhizobium medicae WSM419 hypothetical protein YP_001327970.1 2382331 R 366394 CDS YP_001327971.1 150397504 5323165 complement(2383541..2384629) 1 NC_009636.1 KEGG: sme:SMc02735 hypothetical protein; hypothetical protein 2384629 5323165 Smed_2304 Sinorhizobium medicae WSM419 hypothetical protein YP_001327971.1 2383541 R 366394 CDS YP_001327972.1 150397505 5323166 2384946..2385902 1 NC_009636.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMc02737 putative glycine betaine-binding ABC transporter protein; glycine betaine ABC transporter substrate-binding protein 2385902 5323166 Smed_2305 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001327972.1 2384946 D 366394 CDS YP_001327973.1 150397506 5323167 2386055..2386900 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02738 putative glycine betaine transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2386900 5323167 Smed_2306 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327973.1 2386055 D 366394 CDS YP_001327974.1 150397507 5323168 2386897..2387946 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02739 putative glycine betaine transport ATP-binding ABC transporter protein; ABC transporter-like protein 2387946 5323168 Smed_2307 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327974.1 2386897 D 366394 CDS YP_001327975.1 150397508 5323169 2387981..2388724 1 NC_009636.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sme:SMc04457 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2388724 5323169 Smed_2308 Sinorhizobium medicae WSM419 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001327975.1 2387981 D 366394 CDS YP_001327976.1 150397509 5323170 2388843..2389187 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH03089 transcriptional regulator protein (repressor of nodulation genes), ArsR family; regulatory protein ArsR 2389187 5323170 Smed_2309 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001327976.1 2388843 D 366394 CDS YP_001327977.1 150397510 5323171 2389280..2389858 1 NC_009636.1 KEGG: sme:SMc01535 hypothetical protein; hypothetical protein 2389858 5323171 Smed_2310 Sinorhizobium medicae WSM419 hypothetical protein YP_001327977.1 2389280 D 366394 CDS YP_001327978.1 150397511 5323172 complement(2389957..2391042) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20235 putative sugar ABC transporter ATP-binding protein; ABC transporter-like protein 2391042 5323172 Smed_2311 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327978.1 2389957 R 366394 CDS YP_001327979.1 150397512 5323173 complement(2391046..2392242) 1 NC_009636.1 KEGG: sme:SMb20234 hypothetical protein; hypothetical protein 2392242 5323173 Smed_2312 Sinorhizobium medicae WSM419 hypothetical protein YP_001327979.1 2391046 R 366394 CDS YP_001327980.1 150397513 5323174 complement(2392269..2393111) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20233 putative sugar ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2393111 5323174 Smed_2313 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327980.1 2392269 R 366394 CDS YP_001327981.1 150397514 5323175 complement(2393104..2394036) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20232 putative suagr ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 2394036 5323175 Smed_2314 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327981.1 2393104 R 366394 CDS YP_001327982.1 150397515 5323176 complement(2394167..2395534) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20231 putative ABC transporter sugar-binding protein; extracellular solute-binding protein 2395534 5323176 Smed_2315 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327982.1 2394167 R 366394 CDS YP_001327983.1 150397516 5323177 complement(2395596..2396600) 1 NC_009636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20230 probable smc22-r protein; alanine racemase 2396600 5323177 Smed_2316 Sinorhizobium medicae WSM419 alanine racemase YP_001327983.1 2395596 R 366394 CDS YP_001327984.1 150397517 5323178 2396850..2398178 1 NC_009636.1 catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; omega amino acid--pyruvate transaminase 2398178 5323178 Smed_2317 Sinorhizobium medicae WSM419 omega amino acid--pyruvate transaminase YP_001327984.1 2396850 D 366394 CDS YP_001327985.1 150397518 5323179 2398265..2399962 1 NC_009636.1 TIGRFAM: adenine deaminase; PFAM: amidohydrolase; KEGG: sme:SMc01533 putative adenine deaminase protein; adenine deaminase 2399962 5323179 Smed_2318 Sinorhizobium medicae WSM419 adenine deaminase YP_001327985.1 2398265 D 366394 CDS YP_001327986.1 150397519 5323180 complement(2400098..2400481) 1 NC_009636.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: bhe:BH06620 virulence-associated protein; XRE family plasmid maintenance system antidote protein 2400481 5323180 Smed_2319 Sinorhizobium medicae WSM419 XRE family plasmid maintenance system antidote protein YP_001327986.1 2400098 R 366394 CDS YP_001327987.1 150397520 5323181 complement(2400629..2402272) 1 NC_009636.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMc01532 putative alpha-glycosylase protein; alpha amylase 2402272 5323181 Smed_2320 Sinorhizobium medicae WSM419 alpha amylase YP_001327987.1 2400629 R 366394 CDS YP_001327988.1 150397521 5323182 2402407..2403339 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc01531 putative 2-dehydro-3-deoxygluconokinase protein; ribokinase-like domain-containing protein 2403339 5323182 Smed_2321 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001327988.1 2402407 D 366394 CDS YP_001327989.1 150397522 5323183 complement(2403389..2404156) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01529 putative dipeptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 2404156 5323183 Smed_2322 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327989.1 2403389 R 366394 CDS YP_001327990.1 150397523 5323184 complement(2404153..2404986) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01528 putative dipeptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 2404986 5323184 Smed_2323 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001327990.1 2404153 R 366394 CDS YP_001327991.1 150397524 5323185 complement(2404983..2405942) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01527 putative dipeptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2405942 5323185 Smed_2324 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327991.1 2404983 R 366394 CDS YP_001327992.1 150397525 5323186 complement(2405939..2406982) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01526 putative dipeptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2406982 5323186 Smed_2325 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001327992.1 2405939 R 366394 CDS YP_001327993.1 150397526 5323187 complement(2407024..2408664) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc01525 putative dipeptide binding periplasmic protein; extracellular solute-binding protein 2408664 5323187 Smed_2326 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001327993.1 2407024 R 366394 CDS YP_001327994.1 150397527 5323188 complement(2408712..2409773) 1 NC_009636.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sme:SMc01524 putative dipeptidase protein; peptidase M19 2409773 5323188 Smed_2327 Sinorhizobium medicae WSM419 peptidase M19 YP_001327994.1 2408712 R 366394 CDS YP_001327995.1 150397528 5323189 complement(2409962..2410303) 1 NC_009636.1 PFAM: small multidrug resistance protein; KEGG: sme:SMc01523 putative methyl viologen/ethidium resistance transmembrane protein; small multidrug resistance protein 2410303 5323189 Smed_2328 Sinorhizobium medicae WSM419 small multidrug resistance protein YP_001327995.1 2409962 R 366394 CDS YP_001327996.1 150397529 5323190 complement(2410347..2410907) 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc01522 hypothetical protein; TetR family transcriptional regulator 2410907 5323190 Smed_2329 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001327996.1 2410347 R 366394 CDS YP_001327997.1 150397530 5323191 2411046..2411438 1 NC_009636.1 PFAM: globin; KEGG: sme:SMc01520 hypothetical protein; globin 2411438 5323191 Smed_2330 Sinorhizobium medicae WSM419 globin YP_001327997.1 2411046 D 366394 CDS YP_001327998.1 150397531 5323192 2411444..2411812 1 NC_009636.1 PFAM: protein of unknown function DUF423; KEGG: sme:SMc01519 hypothetical protein; hypothetical protein 2411812 5323192 Smed_2331 Sinorhizobium medicae WSM419 hypothetical protein YP_001327998.1 2411444 D 366394 CDS YP_001327999.1 150397532 5323193 complement(2411904..2412218) 1 NC_009636.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sme:SMc01518 hypothetical protein; antibiotic biosynthesis monooxygenase 2412218 5323193 Smed_2332 Sinorhizobium medicae WSM419 antibiotic biosynthesis monooxygenase YP_001327999.1 2411904 R 366394 CDS YP_001328000.1 150397533 5323194 complement(2412223..2412513) 1 NC_009636.1 KEGG: sme:SMc01517 hypothetical protein; hypothetical protein 2412513 5323194 Smed_2333 Sinorhizobium medicae WSM419 hypothetical protein YP_001328000.1 2412223 R 366394 CDS YP_001328001.1 150397534 5323195 complement(2412573..2412998) 1 NC_009636.1 KEGG: sme:SMc01516 hypothetical protein; hypothetical protein 2412998 5323195 Smed_2334 Sinorhizobium medicae WSM419 hypothetical protein YP_001328001.1 2412573 R 366394 CDS YP_001328002.1 150397535 5323196 complement(2413322..2414248) 1 NC_009636.1 TIGRFAM: TonB family protein; KEGG: sme:SMc01515 TonB protein; TonB family protein 2414248 5323196 Smed_2335 Sinorhizobium medicae WSM419 TonB family protein YP_001328002.1 2413322 R 366394 CDS YP_001328003.1 150397536 5323197 complement(2414302..2414736) 1 NC_009636.1 KEGG: sme:SMc01514 hypothetical protein; hypothetical protein 2414736 5323197 Smed_2336 Sinorhizobium medicae WSM419 hypothetical protein YP_001328003.1 2414302 R 366394 CDS YP_001328004.1 150397537 5323198 2414863..2415111 1 NC_009636.1 KEGG: sme:SMc01747 hypothetical protein; hemin uptake protein-like protein 2415111 5323198 Smed_2337 Sinorhizobium medicae WSM419 hemin uptake protein-like protein YP_001328004.1 2414863 D 366394 CDS YP_001328005.1 150397538 5323199 2415116..2416183 1 NC_009636.1 PFAM: Haemin-degrading family protein; KEGG: sme:SMc01513 putative hemin transport protein; hemin-degrading family protein 2416183 5323199 Smed_2338 Sinorhizobium medicae WSM419 hemin-degrading family protein YP_001328005.1 2415116 D 366394 CDS YP_001328006.1 150397539 5323200 2416320..2417270 1 NC_009636.1 PFAM: periplasmic binding protein; KEGG: sme:SMc01512 putative hemin binding periplasmic transmembrane protein; periplasmic binding protein 2417270 5323200 Smed_2339 Sinorhizobium medicae WSM419 periplasmic binding protein YP_001328006.1 2416320 D 366394 CDS YP_001328007.1 150397540 5323201 2417275..2418390 1 NC_009636.1 PFAM: transport system permease protein; KEGG: sme:SMc01511 putative hemin transport system permease transmembrane protein; transport system permease 2418390 5323201 Smed_2340 Sinorhizobium medicae WSM419 transport system permease YP_001328007.1 2417275 D 366394 CDS YP_001328008.1 150397541 5323202 2418399..2419187 1 NC_009636.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2419187 hmuV 5323202 hmuV Sinorhizobium medicae WSM419 hemin importer ATP-binding subunit YP_001328008.1 2418399 D 366394 CDS YP_001328009.1 150397542 5323203 2419384..2419746 1 NC_009636.1 KEGG: sme:SMc01509 hypothetical protein; hypothetical protein 2419746 5323203 Smed_2342 Sinorhizobium medicae WSM419 hypothetical protein YP_001328009.1 2419384 D 366394 CDS YP_001328010.1 150397543 5323204 2419789..2420220 1 NC_009636.1 KEGG: sme:SMc01508 hypothetical protein; hypothetical protein 2420220 5323204 Smed_2343 Sinorhizobium medicae WSM419 hypothetical protein YP_001328010.1 2419789 D 366394 CDS YP_001328011.1 150397544 5323205 complement(2420305..2421807) 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sme:SMc01507 hypothetical protein; signal transduction histidine kinase 2421807 5323205 Smed_2344 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001328011.1 2420305 R 366394 CDS YP_001328012.1 150397545 5323206 complement(2422053..2422607) 1 NC_009636.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2422607 5323206 Smed_2345 Sinorhizobium medicae WSM419 RNA polymerase sigma factor YP_001328012.1 2422053 R 366394 CDS YP_001328013.1 150397546 5323207 complement(2422615..2422809) 1 NC_009636.1 KEGG: sme:SMc01505 hypothetical protein; hypothetical protein 2422809 5323207 Smed_2346 Sinorhizobium medicae WSM419 hypothetical protein YP_001328013.1 2422615 R 366394 CDS YP_001328014.1 150397547 5323208 2422944..2423738 1 NC_009636.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 2423738 5323208 Smed_2347 Sinorhizobium medicae WSM419 two-component response regulator YP_001328014.1 2422944 D 366394 CDS YP_001328015.1 150397548 5323209 complement(2423913..2424488) 1 NC_009636.1 KEGG: sus:Acid_3306 hypothetical protein; hypothetical protein 2424488 5323209 Smed_2348 Sinorhizobium medicae WSM419 hypothetical protein YP_001328015.1 2423913 R 366394 CDS YP_001328016.1 150397549 5323210 complement(2424491..2424865) 1 NC_009636.1 KEGG: rle:pRL120547 putative MFS family transporter protein; MFS family transporter 2424865 5323210 Smed_2349 Sinorhizobium medicae WSM419 MFS family transporter YP_001328016.1 2424491 R 366394 CDS YP_001328017.1 150397550 5323211 2424961..2425857 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL120548 putative LysR family transcriptional regulator; LysR family transcriptional regulator 2425857 5323211 Smed_2350 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328017.1 2424961 D 366394 CDS YP_001328018.1 150397551 5323212 complement(2426114..2427700) 1 NC_009636.1 TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc01503 putative sugar kinase protein; FGGY-family pentulose kinase 2427700 5323212 Smed_2351 Sinorhizobium medicae WSM419 FGGY-family pentulose kinase YP_001328018.1 2426114 R 366394 CDS YP_001328019.1 150397552 5323213 complement(2427810..2428478) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sme:SMc01502 putative hydrolase phosphatase protein; HAD family hydrolase 2428478 5323213 Smed_2352 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001328019.1 2427810 R 366394 CDS YP_001328020.1 150397553 5323214 complement(2428481..2429965) 1 NC_009636.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sme:SMc01501 probable mannitol 2-dehydrogenase protein; mannitol dehydrogenase domain-containing protein 2429965 5323214 Smed_2353 Sinorhizobium medicae WSM419 mannitol dehydrogenase domain-containing protein YP_001328020.1 2428481 R 366394 CDS YP_001328021.1 150397554 5323215 complement(2429994..2430767) 1 NC_009636.1 Converts D-sorbitol to L-sorbose; sorbitol dehydrogenase 2430767 5323215 Smed_2354 Sinorhizobium medicae WSM419 sorbitol dehydrogenase YP_001328021.1 2429994 R 366394 CDS YP_001328022.1 150397555 5323216 complement(2430764..2431765) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01499 probable ATP-binding transport ABC transporter protein; ABC transporter-like protein 2431765 5323216 Smed_2355 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328022.1 2430764 R 366394 CDS YP_001328023.1 150397556 5323217 complement(2431813..2432643) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01498 probable sorbitol/mannitol transport inner membrane protein; binding-protein-dependent transport system inner membrane protein 2432643 5323217 Smed_2356 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328023.1 2431813 R 366394 CDS YP_001328024.1 150397557 5323218 complement(2432649..2433521) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01497 probable sorbitol/mannitol transport inner membrane transmembrane protein; binding-protein-dependent transport system inner membrane protein 2433521 5323218 Smed_2357 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328024.1 2432649 R 366394 CDS YP_001328025.1 150397558 5323219 complement(2433714..2435039) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01496 probable sorbitol-binding periplasmic protein; extracellular solute-binding protein 2435039 5323219 Smed_2358 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328025.1 2433714 R 366394 CDS YP_001328026.1 150397559 5323220 complement(2435199..2436152) 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: sme:SMc01495 probable transcription regulator protein; DeoR family transcriptional regulator 2436152 5323220 Smed_2359 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328026.1 2435199 R 366394 CDS YP_001328027.1 150397560 5323221 2436352..2437713 1 NC_009636.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2437713 5323221 Smed_2360 Sinorhizobium medicae WSM419 putative oxidoreductase YP_001328027.1 2436352 D 366394 CDS YP_001328028.1 150397561 5323222 2437744..2439057 1 NC_009636.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 2439057 5323222 Smed_2361 Sinorhizobium medicae WSM419 dihydropyrimidine dehydrogenase YP_001328028.1 2437744 D 366394 CDS YP_001328029.1 150397562 5323223 complement(2439122..2440225) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc01816 putative oxidoreductase protein; alcohol dehydrogenase 2440225 5323223 Smed_2362 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328029.1 2439122 R 366394 CDS YP_001328030.1 150397563 5323224 2440249..2441148 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01817 putative transcription regulator protein; LysR family transcriptional regulator 2441148 5323224 Smed_2363 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328030.1 2440249 D 366394 CDS YP_001328031.1 150397564 5323225 2441307..2442983 1 NC_009636.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc01818 putative adenylate cyclase transmembrane protein; putative adenylate/guanylate cyclase 2442983 5323225 Smed_2364 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001328031.1 2441307 D 366394 CDS YP_001328032.1 150397565 5323226 complement(2443156..2443797) 1 NC_009636.1 PFAM: regulatory protein TetR; Tetracycline transcriptional regulator YcdC domain protein; KEGG: sme:SMc01819 putative transcription regulator protein; TetR family transcriptional regulator 2443797 5323226 Smed_2365 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001328032.1 2443156 R 366394 CDS YP_001328033.1 150397566 5323227 2444076..2445326 1 NC_009636.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 2445326 5323227 Smed_2366 Sinorhizobium medicae WSM419 allantoate amidohydrolase YP_001328033.1 2444076 D 366394 CDS YP_001328034.1 150397567 5323228 2445501..2446955 1 NC_009636.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 2446955 5323228 Smed_2367 Sinorhizobium medicae WSM419 phenylhydantoinase YP_001328034.1 2445501 D 366394 CDS YP_001328035.1 150397568 5323229 complement(2447007..2447420) 1 NC_009636.1 PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: sme:SMc01822 hypothetical protein; cupin 2447420 5323229 Smed_2368 Sinorhizobium medicae WSM419 cupin YP_001328035.1 2447007 R 366394 CDS YP_001328036.1 150397569 5323230 2447542..2448333 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01823 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2448333 5323230 Smed_2369 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328036.1 2447542 D 366394 CDS YP_001328037.1 150397570 5323231 2448323..2448808 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc01824 hypothetical protein; N-acetyltransferase GCN5 2448808 5323231 Smed_2370 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328037.1 2448323 D 366394 CDS YP_001328038.1 150397571 5323232 2448811..2449695 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01825 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2449695 5323232 Smed_2371 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328038.1 2448811 D 366394 CDS YP_001328039.1 150397572 5323233 2449692..2450561 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01826 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2450561 5323233 Smed_2372 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328039.1 2449692 D 366394 CDS YP_001328040.1 150397573 5323234 2450590..2451582 1 NC_009636.1 PFAM: NMT1/THI5 like domain protein; KEGG: sme:SMc01827 hypothetical protein; NMT1/THI5-like domain-containing protein 2451582 5323234 Smed_2373 Sinorhizobium medicae WSM419 NMT1/THI5-like domain-containing protein YP_001328040.1 2450590 D 366394 CDS YP_001328041.1 150397574 5323235 2452181..2453368 1 NC_009636.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc01828 putative transport transmembrane protein; RND family efflux transporter MFP subunit 2453368 5323235 Smed_2374 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001328041.1 2452181 D 366394 CDS YP_001328042.1 150397575 5323236 2453384..2456695 1 NC_009636.1 PFAM: acriflavin resistance protein; KEGG: sme:SMc01829 putative transport transmembrane protein; acriflavin resistance protein 2456695 5323236 Smed_2375 Sinorhizobium medicae WSM419 acriflavin resistance protein YP_001328042.1 2453384 D 366394 CDS YP_001328043.1 150397576 5323237 2456829..2457509 1 NC_009636.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: sme:SMa1207 FixK-like regulatory protein; CRP/FNR family transcriptional regulator 2457509 5323237 Smed_2376 Sinorhizobium medicae WSM419 CRP/FNR family transcriptional regulator YP_001328043.1 2456829 D 366394 CDS YP_001328044.1 150397577 5323238 complement(2457520..2458131) 1 NC_009636.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: sme:SMc01830 probable urease accessory protein; urease accessory protein UreG 2458131 5323238 Smed_2377 Sinorhizobium medicae WSM419 urease accessory protein UreG YP_001328044.1 2457520 R 366394 CDS YP_001328045.1 150397578 5323239 complement(2458164..2458835) 1 NC_009636.1 PFAM: Urease accessory protein UreF; KEGG: sme:SMc01831 putative urease accessory protein; urease accessory protein UreF 2458835 5323239 Smed_2378 Sinorhizobium medicae WSM419 urease accessory protein UreF YP_001328045.1 2458164 R 366394 CDS YP_001328046.1 150397579 5323240 complement(2458828..2459292) 1 NC_009636.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 2459292 ureE 5323240 ureE Sinorhizobium medicae WSM419 urease accessory protein UreE YP_001328046.1 2458828 R 366394 CDS YP_001328047.1 150397580 5323241 complement(2459294..2459590) 1 NC_009636.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sme:SMc01833 hypothetical protein; antibiotic biosynthesis monooxygenase 2459590 5323241 Smed_2380 Sinorhizobium medicae WSM419 antibiotic biosynthesis monooxygenase YP_001328047.1 2459294 R 366394 CDS YP_001328048.1 150397581 5323242 complement(2459780..2460319) 1 NC_009636.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMc01834 hypothetical protein; peroxiredoxin 2460319 5323242 Smed_2381 Sinorhizobium medicae WSM419 peroxiredoxin YP_001328048.1 2459780 R 366394 CDS YP_001328049.1 150397582 5323243 complement(2460507..2461178) 1 NC_009636.1 KEGG: ret:RHE_CH03304 probable urease-associated protein; putative urease-associated protein 2461178 5323243 Smed_2382 Sinorhizobium medicae WSM419 putative urease-associated protein YP_001328049.1 2460507 R 366394 CDS YP_001328050.1 150397583 5323244 complement(2461200..2462912) 1 NC_009636.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 2462912 ureC 5323244 ureC Sinorhizobium medicae WSM419 urease subunit alpha YP_001328050.1 2461200 R 366394 CDS YP_001328051.1 150397584 5323245 complement(2462916..2463566) 1 NC_009636.1 KEGG: sme:SMc01838 putative urease accessory protein; putative urease accessory protein 2463566 5323245 Smed_2384 Sinorhizobium medicae WSM419 putative urease accessory protein YP_001328051.1 2462916 R 366394 CDS YP_001328052.1 150397585 5323246 complement(2463570..2463992) 1 NC_009636.1 PFAM: protein of unknown function DUF1311; KEGG: sme:SMc02046 hypothetical protein; hypothetical protein 2463992 5323246 Smed_2385 Sinorhizobium medicae WSM419 hypothetical protein YP_001328052.1 2463570 R 366394 CDS YP_001328053.1 150397586 5323247 complement(2463989..2464294) 1 NC_009636.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 2464294 ureB 5323247 ureB Sinorhizobium medicae WSM419 urease subunit beta YP_001328053.1 2463989 R 366394 CDS YP_001328054.1 150397587 5323248 complement(2464305..2464559) 1 NC_009636.1 PFAM: protein of unknown function DUF1272; KEGG: sme:SMc01940 hypothetical protein; hypothetical protein 2464559 5323248 Smed_2387 Sinorhizobium medicae WSM419 hypothetical protein YP_001328054.1 2464305 R 366394 CDS YP_001328055.1 150397588 5323249 complement(2464576..2464878) 1 NC_009636.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 2464878 ureA 5323249 ureA Sinorhizobium medicae WSM419 urease subunit gamma YP_001328055.1 2464576 R 366394 CDS YP_001328056.1 150397589 5323250 complement(2464905..2465738) 1 NC_009636.1 PFAM: Urease accessory protein UreD; KEGG: sme:SMc01942 probable urease accessory protein; urease accessory protein UreD 2465738 5323250 Smed_2389 Sinorhizobium medicae WSM419 urease accessory protein UreD YP_001328056.1 2464905 R 366394 CDS YP_001328057.1 150397590 5323251 complement(2465841..2466815) 1 NC_009636.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc01943 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2466815 5323251 Smed_2390 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001328057.1 2465841 R 366394 CDS YP_001328058.1 150397591 5323252 2467002..2468108 1 NC_009636.1 PFAM: Peptidase A1 pepsin; KEGG: dme:Dmel_CG33128 CG33128; peptidase A1 pepsin 2468108 5323252 Smed_2391 Sinorhizobium medicae WSM419 peptidase A1 pepsin YP_001328058.1 2467002 D 366394 CDS YP_001328059.1 150397592 5323253 complement(2468208..2469326) 1 NC_009636.1 PFAM: Extracellular ligand-binding receptor; KEGG: sme:SMc01946 putative leucine-specific binding protein precursor; extracellular ligand-binding receptor 2469326 5323253 Smed_2392 Sinorhizobium medicae WSM419 extracellular ligand-binding receptor YP_001328059.1 2468208 R 366394 CDS YP_001328060.1 150397593 5323254 complement(2469440..2469784) 1 NC_009636.1 KEGG: sme:SMc01947 hypothetical protein; hypothetical protein 2469784 5323254 Smed_2393 Sinorhizobium medicae WSM419 hypothetical protein YP_001328060.1 2469440 R 366394 CDS YP_001328061.1 150397594 5323255 complement(2469810..2470535) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01948 probable high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein; ABC transporter-like protein 2470535 5323255 Smed_2394 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328061.1 2469810 R 366394 CDS YP_001328062.1 150397595 5323256 complement(2470532..2471419) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01949 probable high-affinity branched-chain amino acid transport ATP-binding ABC transporter protein; ABC transporter-like protein 2471419 5323256 Smed_2395 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328062.1 2470532 R 366394 CDS YP_001328063.1 150397596 5323257 complement(2471419..2472804) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc01950 probable high-affinity branched-chain amino acid transport permease ABC transporter protein; inner-membrane translocator 2472804 5323257 Smed_2396 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328063.1 2471419 R 366394 CDS YP_001328064.1 150397597 5323258 complement(2472809..2473711) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc01951 probable high-affinity branched-chain amino acid transport permease ABC transporter protein; inner-membrane translocator 2473711 5323258 Smed_2397 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328064.1 2472809 R 366394 CDS YP_001328065.1 150397598 5323259 2474157..2474933 1 NC_009636.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sme:SMc01952 putative transmembrane protein; 3'(2'),5'-bisphosphate nucleotidase 2474933 5323259 Smed_2398 Sinorhizobium medicae WSM419 3'(2'),5'-bisphosphate nucleotidase YP_001328065.1 2474157 D 366394 CDS YP_001328066.1 150397599 5323260 complement(2474983..2475369) 1 NC_009636.1 KEGG: sme:SMc01953 putative 2-component receiver domain protein; response regulator receiver protein 2475369 5323260 Smed_2399 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001328066.1 2474983 R 366394 CDS YP_001328067.1 150397600 5323261 complement(2475596..2476348) 1 NC_009636.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: sme:SMc01954 putative transcription regulator protein; CRP/FNR family transcriptional regulator 2476348 5323261 Smed_2400 Sinorhizobium medicae WSM419 CRP/FNR family transcriptional regulator YP_001328067.1 2475596 R 366394 CDS YP_001328068.1 150397601 5323262 2476628..2477488 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc01955 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2477488 5323262 Smed_2401 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328068.1 2476628 D 366394 CDS YP_001328069.1 150397602 5323263 2477535..2479091 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01956 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2479091 5323263 Smed_2402 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001328069.1 2477535 D 366394 CDS YP_001328070.1 150397603 5323264 complement(2479092..2479649) 1 NC_009636.1 PFAM: NADPH-dependent FMN reductase; KEGG: sme:SMc01960 putative oxidoreductase protein; NADPH-dependent FMN reductase 2479649 5323264 Smed_2403 Sinorhizobium medicae WSM419 NADPH-dependent FMN reductase YP_001328070.1 2479092 R 366394 CDS YP_001328071.1 150397604 5323265 complement(2479754..2480707) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01961 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2480707 5323265 Smed_2404 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001328071.1 2479754 R 366394 CDS YP_001328072.1 150397605 5323266 complement(2480867..2481643) 1 NC_009636.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sme:SMc01962 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2481643 5323266 Smed_2405 Sinorhizobium medicae WSM419 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001328072.1 2480867 R 366394 CDS YP_001328073.1 150397606 5323267 complement(2481644..2482444) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01963 putative spermidine/putrescine transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2482444 5323267 Smed_2406 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328073.1 2481644 R 366394 CDS YP_001328074.1 150397607 5323268 complement(2482441..2483295) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01964 putative spermidine/putrescine transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2483295 5323268 Smed_2407 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328074.1 2482441 R 366394 CDS YP_001328075.1 150397608 5323269 complement(2483292..2484329) 1 NC_009636.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01965 putative spermidine/putrescine transport ATP-binding ABC transporter protein; spermidine/putrescine ABC transporter ATPase 2484329 5323269 Smed_2408 Sinorhizobium medicae WSM419 spermidine/putrescine ABC transporter ATPase YP_001328075.1 2483292 R 366394 CDS YP_001328076.1 150397609 5323270 complement(2484504..2485583) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01966 putative spermidine/putrescine-binding periplasmic ABC transporter protein; extracellular solute-binding protein 2485583 5323270 Smed_2409 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328076.1 2484504 R 366394 CDS YP_001328077.1 150397610 5323271 complement(2485757..2486815) 1 NC_009636.1 TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMc01967 putative agmatinase protein; putative agmatinase 2486815 5323271 Smed_2410 Sinorhizobium medicae WSM419 putative agmatinase YP_001328077.1 2485757 R 366394 CDS YP_001328078.1 150397611 5323272 2487036..2488052 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01968 putative transcription regulator protein; LysR family transcriptional regulator 2488052 5323272 Smed_2411 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328078.1 2487036 D 366394 CDS YP_001328079.1 150397612 5323273 2488111..2489289 1 NC_009636.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: sme:SMc01969 hypothetical protein; hypothetical protein 2489289 5323273 Smed_2412 Sinorhizobium medicae WSM419 hypothetical protein YP_001328079.1 2488111 D 366394 CDS YP_001328080.1 150397613 5323274 complement(2489381..2490226) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc01970 hypothetical protein; hypothetical protein 2490226 5323274 Smed_2413 Sinorhizobium medicae WSM419 hypothetical protein YP_001328080.1 2489381 R 366394 CDS YP_001328081.1 150397614 5323275 complement(2490588..2492021) 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMc01971 putative aldehyde dehydrogenase protein; aldehyde dehydrogenase 2492021 5323275 Smed_2414 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001328081.1 2490588 R 366394 CDS YP_001328082.1 150397615 5323276 complement(2492517..2493827) 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc01972 putative oxidoreductase protein; FAD dependent oxidoreductase 2493827 5323276 Smed_2415 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001328082.1 2492517 R 366394 CDS YP_001328083.1 150397616 5323277 complement(2493827..2495194) 1 NC_009636.1 PFAM: glutamine synthetase catalytic region; KEGG: sme:SMc01973 putative homologous to A glutamine synthetase protein; glutamine synthetase 2495194 5323277 Smed_2416 Sinorhizobium medicae WSM419 glutamine synthetase YP_001328083.1 2493827 R 366394 CDS YP_001328084.1 150397617 5323278 2495315..2496007 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc01974 putative transcription regulator protein; GntR family transcriptional regulator 2496007 5323278 Smed_2417 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328084.1 2495315 D 366394 CDS YP_001328085.1 150397618 5323279 2496184..2496900 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc01975 putative transcription regulator protein; GntR family transcriptional regulator 2496900 5323279 Smed_2418 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328085.1 2496184 D 366394 CDS YP_001328086.1 150397619 5323280 2496897..2498069 1 NC_009636.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sme:SMc01976 hypothetical protein; hypothetical protein 2498069 5323280 Smed_2419 Sinorhizobium medicae WSM419 hypothetical protein YP_001328086.1 2496897 D 366394 CDS YP_001328087.1 150397620 5323281 2498105..2499367 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc01977 putative sugar-binding periplasmic ABC transporter protein; extracellular solute-binding protein 2499367 5323281 Smed_2420 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328087.1 2498105 D 366394 CDS YP_001328088.1 150397621 5323282 2499470..2500405 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01978 putative sugar transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2500405 5323282 Smed_2421 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328088.1 2499470 D 366394 CDS YP_001328089.1 150397622 5323283 2500410..2501243 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01979 putative sugar transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2501243 5323283 Smed_2422 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328089.1 2500410 D 366394 CDS YP_001328090.1 150397623 5323284 2501249..2502313 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc01980 putative sugar transport system ATP-binding ABC transporter protein; ABC transporter-like protein 2502313 5323284 Smed_2423 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328090.1 2501249 D 366394 CDS YP_001328091.1 150397624 5323285 2502491..2502889 1 NC_009636.1 PFAM: cytochrome c class I; KEGG: sme:SMc01981 putative cytochrome c transmembrane protein; cytochrome c class I 2502889 5323285 Smed_2424 Sinorhizobium medicae WSM419 cytochrome c class I YP_001328091.1 2502491 D 366394 CDS YP_001328092.1 150397625 5323286 2503024..2503968 1 NC_009636.1 PFAM: cytochrome c oxidase subunit II; KEGG: sme:SMc01982 cytochrome c oxidase subunit II; cytochrome c oxidase subunit II 2503968 5323286 Smed_2425 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit II YP_001328092.1 2503024 D 366394 CDS YP_001328093.1 150397626 5323287 2504004..2505782 1 NC_009636.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: sme:SMc01983 cytochrome c oxidase subunit I; cytochrome c oxidase subunit I type 2505782 5323287 Smed_2426 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit I type YP_001328093.1 2504004 D 366394 CDS YP_001328094.1 150397627 5323288 2505779..2506477 1 NC_009636.1 PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc01984 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 2506477 5323288 Smed_2427 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit III YP_001328094.1 2505779 D 366394 CDS YP_001328095.1 150397628 5323289 2506490..2507212 1 NC_009636.1 PFAM: cytochrome c oxidase subunit III; KEGG: sme:SMc01985 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 2507212 5323289 Smed_2428 Sinorhizobium medicae WSM419 cytochrome c oxidase subunit III YP_001328095.1 2506490 D 366394 CDS YP_001328096.1 150397629 5323290 2507225..2507581 1 NC_009636.1 KEGG: sme:SMc01986 hypothetical protein; hypothetical protein 2507581 5323290 Smed_2429 Sinorhizobium medicae WSM419 hypothetical protein YP_001328096.1 2507225 D 366394 CDS YP_001328097.1 150397630 5323291 2507844..2510405 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); KEGG: sme:SMc01987 putative dehydrogenase protein; FAD dependent oxidoreductase 2510405 5323291 Smed_2430 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001328097.1 2507844 D 366394 CDS YP_001328098.1 150397631 5323292 complement(2510557..2511483) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMb20716 hypothetical protein; hypothetical protein 2511483 5323292 Smed_2431 Sinorhizobium medicae WSM419 hypothetical protein YP_001328098.1 2510557 R 366394 CDS YP_001328099.1 150397632 5323293 2511623..2512513 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20715 putative transcriptional regulator, LysR family protein; LysR family transcriptional regulator 2512513 5323293 Smed_2432 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328099.1 2511623 D 366394 CDS YP_001328100.1 150397633 5323294 2512853..2513488 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: rsp:RSP_1486 regulatory protein, TetR family; TetR family transcriptional regulator 2513488 5323294 Smed_2433 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001328100.1 2512853 D 366394 CDS YP_001328101.1 150397634 5323295 2513485..2514021 1 NC_009636.1 KEGG: jan:Jann_2415 hypothetical protein; hypothetical protein 2514021 5323295 Smed_2434 Sinorhizobium medicae WSM419 hypothetical protein YP_001328101.1 2513485 D 366394 CDS YP_001328102.1 150397635 5323296 complement(2514061..2515506) 1 NC_009636.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: sme:SMc02024 hypothetical protein; amidohydrolase 2515506 5323296 Smed_2435 Sinorhizobium medicae WSM419 amidohydrolase YP_001328102.1 2514061 R 366394 CDS YP_001328103.1 150397636 5323297 complement(2515634..2517178) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc02025 putative dipeptide-binding periplasmic protein; extracellular solute-binding protein 2517178 5323297 Smed_2436 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328103.1 2515634 R 366394 CDS YP_001328104.1 150397637 5323298 complement(2517192..2518064) 1 NC_009636.1 KEGG: sme:SMc02026 putative beta-lactamase precursor protein; putative beta-lactamase protein 2518064 5323298 Smed_2437 Sinorhizobium medicae WSM419 putative beta-lactamase protein YP_001328104.1 2517192 R 366394 CDS YP_001328105.1 150397638 5323299 complement(2518066..2519691) 1 NC_009636.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc02027 putative dipeptide transport ATP-binding ABC transporter protein; ABC transporter-like protein 2519691 5323299 Smed_2438 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328105.1 2518066 R 366394 CDS YP_001328106.1 150397639 5323300 complement(2519688..2520506) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02028 putative dipeptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2520506 5323300 Smed_2439 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328106.1 2519688 R 366394 CDS YP_001328107.1 150397640 5323301 complement(2520503..2521447) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02029 putative dipeptide transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2521447 5323301 Smed_2440 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328107.1 2520503 R 366394 CDS YP_001328108.1 150397641 5323302 complement(2521611..2522516) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02030 putative transcription regulator protein; LysR family transcriptional regulator 2522516 5323302 Smed_2441 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328108.1 2521611 R 366394 CDS YP_001328109.1 150397642 5323303 complement(2522756..2523805) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02031 putative permease protein; monosaccharide-transporting ATPase 2523805 5323303 Smed_2442 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328109.1 2522756 R 366394 CDS YP_001328110.1 150397643 5323304 complement(2523994..2525478) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02032 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2525478 5323304 Smed_2443 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328110.1 2523994 R 366394 CDS YP_001328111.1 150397644 5323305 complement(2525809..2526996) 1 NC_009636.1 KEGG: sme:SMc02033 putative periplasmic binding protein; putative periplasmic binding protein 2526996 5323305 Smed_2444 Sinorhizobium medicae WSM419 putative periplasmic binding protein YP_001328111.1 2525809 R 366394 CDS YP_001328112.1 150397645 5323306 complement(2527415..2528188) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02034 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2528188 5323306 Smed_2445 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328112.1 2527415 R 366394 CDS YP_001328113.1 150397646 5323307 complement(2528233..2529669) 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: mpt:Mpe_A0361 lactaldehyde dehydrogenase; aldehyde dehydrogenase 2529669 5323307 Smed_2446 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001328113.1 2528233 R 366394 CDS YP_001328114.1 150397647 5323308 complement(2529698..2530693) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ter:Tery_0562 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 2530693 5323308 Smed_2447 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328114.1 2529698 R 366394 CDS YP_001328115.1 150397648 5323309 complement(2530702..2531493) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mes:Meso_3153 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2531493 5323309 Smed_2448 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328115.1 2530702 R 366394 CDS YP_001328116.1 150397649 5323310 complement(2531471..2531998) 1 NC_009636.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mes:Meso_3152 cupin 2, conserved barrel; cupin 2531998 5323310 Smed_2449 Sinorhizobium medicae WSM419 cupin YP_001328116.1 2531471 R 366394 CDS YP_001328117.1 150397650 5323311 complement(2532008..2533672) 1 NC_009636.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: vei:Veis_0884 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 2533672 5323311 Smed_2450 Sinorhizobium medicae WSM419 glucose-methanol-choline oxidoreductase YP_001328117.1 2532008 R 366394 CDS YP_001328118.1 150397651 5323312 complement(2533669..2534763) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mlo:mll7151 sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 2534763 5323312 Smed_2451 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328118.1 2533669 R 366394 CDS YP_001328119.1 150397652 5323313 complement(2534767..2535876) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pfu:PF1933 putative sugar transport ATP-hydrolyzing; ABC transporter-like protein 2535876 5323313 Smed_2452 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328119.1 2534767 R 366394 CDS YP_001328120.1 150397653 5323314 complement(2535876..2536118) 1 NC_009636.1 hypothetical protein 2536118 5323314 Smed_2453 Sinorhizobium medicae WSM419 hypothetical protein YP_001328120.1 2535876 R 366394 CDS YP_001328121.1 150397654 5323315 complement(2536123..2536983) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_2612 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2536983 5323315 Smed_2454 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328121.1 2536123 R 366394 CDS YP_001328122.1 150397655 5323316 complement(2536994..2537935) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2820 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2537935 5323316 Smed_2455 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328122.1 2536994 R 366394 CDS YP_001328123.1 150397656 5323317 complement(2538036..2539391) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: she:Shewmr4_1212 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2539391 5323317 Smed_2456 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328123.1 2538036 R 366394 CDS YP_001328124.1 150397657 5323318 complement(2539447..2540517) 1 NC_009636.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sme:SMc02035 putative malate dehydrogenase; malate/L-lactate dehydrogenase 2540517 5323318 Smed_2457 Sinorhizobium medicae WSM419 malate/L-lactate dehydrogenase YP_001328124.1 2539447 R 366394 CDS YP_001328125.1 150397658 5323319 2540642..2541349 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc02036 putative transcription regulator protein; GntR family transcriptional regulator 2541349 5323319 Smed_2458 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328125.1 2540642 D 366394 CDS YP_001328126.1 150397659 5323320 2541557..2542351 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02037 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2542351 5323320 Smed_2459 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328126.1 2541557 D 366394 CDS YP_001328127.1 150397660 5323321 2542389..2543483 1 NC_009636.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 2543483 gldA 5323321 gldA Sinorhizobium medicae WSM419 glycerol dehydrogenase YP_001328127.1 2542389 D 366394 CDS YP_001328128.1 150397661 5323322 2543501..2544229 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02039 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2544229 5323322 Smed_2461 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328128.1 2543501 D 366394 CDS YP_001328129.1 150397662 5323323 2544231..2544995 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02041 putative oxidoreductase protein; short chain dehydrogenase 2544995 5323323 Smed_2462 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001328129.1 2544231 D 366394 CDS YP_001328130.1 150397663 5323324 2545026..2545670 1 NC_009636.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 2545670 5323324 Smed_2463 Sinorhizobium medicae WSM419 glucose-6-phosphate isomerase YP_001328130.1 2545026 D 366394 CDS YP_001328131.1 150397664 5323325 2545667..2546320 1 NC_009636.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: sme:SMc02043 probable KHG/KDPG aldolase (includes: 4-hydroxy-2-oxoglutarate aldolase, 2-dehydro-3-deoxyphosphogluconate aldolase) protein; 2-dehydro-3-deoxyphosphogluconate aldolase 2546320 5323325 Smed_2464 Sinorhizobium medicae WSM419 2-dehydro-3-deoxyphosphogluconate aldolase YP_001328131.1 2545667 D 366394 CDS YP_001328132.1 150397665 5323326 2546317..2547270 1 NC_009636.1 KEGG: sme:SMc02044 hypothetical protein; hypothetical protein 2547270 5323326 Smed_2465 Sinorhizobium medicae WSM419 hypothetical protein YP_001328132.1 2546317 D 366394 CDS YP_001328133.1 150397666 5323327 2547275..2548207 1 NC_009636.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc02045 putative oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2548207 5323327 Smed_2466 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001328133.1 2547275 D 366394 CDS YP_001328134.1 150397667 5323328 2548204..2549082 1 NC_009636.1 KEGG: sme:SMc02332 hypothetical protein; hypothetical protein 2549082 5323328 Smed_2467 Sinorhizobium medicae WSM419 hypothetical protein YP_001328134.1 2548204 D 366394 CDS YP_001328135.1 150397668 5323329 2549200..2550090 1 NC_009636.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMc02460 hypothetical protein; RpiR family transcriptional regulator 2550090 5323329 Smed_2468 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001328135.1 2549200 D 366394 CDS YP_001328136.1 150397669 5323330 2550093..2550839 1 NC_009636.1 TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sme:SMc02333 putative deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 2550839 5323330 Smed_2469 Sinorhizobium medicae WSM419 deoxyribose-phosphate aldolase YP_001328136.1 2550093 D 366394 CDS YP_001328137.1 150397670 5323331 2550844..2552391 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc02334 putative pentose kinase transmembrane protein; carbohydrate kinase FGGY 2552391 5323331 Smed_2470 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328137.1 2550844 D 366394 CDS YP_001328138.1 150397671 5323332 2552388..2553917 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc02335 putative pentose kinase protein; carbohydrate kinase FGGY 2553917 5323332 Smed_2471 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328138.1 2552388 D 366394 CDS YP_001328139.1 150397672 5323333 2553948..2554706 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc02336 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2554706 5323333 Smed_2472 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328139.1 2553948 D 366394 CDS YP_001328140.1 150397673 5323334 complement(2554811..2555803) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02452 putative transport system permease ABC transporter protein; monosaccharide-transporting ATPase 2555803 5323334 Smed_2473 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328140.1 2554811 R 366394 CDS YP_001328141.1 150397674 5323335 complement(2555800..2557341) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02337 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2557341 5323335 Smed_2474 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328141.1 2555800 R 366394 CDS YP_001328142.1 150397675 5323336 complement(2557375..2558340) 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMc02338 putative periplasmic binding ABC transporter protein; monosaccharide-transporting ATPase 2558340 5323336 Smed_2475 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328142.1 2557375 R 366394 CDS YP_001328143.1 150397676 5323337 complement(2558462..2559181) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02339 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2559181 5323337 Smed_2476 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328143.1 2558462 R 366394 CDS YP_001328144.1 150397677 5323338 2559416..2560150 1 NC_009636.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02340 putative transcription regulator protein; GntR family transcriptional regulator 2560150 5323338 Smed_2477 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328144.1 2559416 D 366394 CDS YP_001328145.1 150397678 5323339 complement(2560279..2561712) 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc02341 putative sugar kinase protein; carbohydrate kinase FGGY 2561712 5323339 Smed_2478 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328145.1 2560279 R 366394 CDS YP_001328146.1 150397679 5323340 complement(2561742..2563736) 1 NC_009636.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 2563736 5323340 Smed_2479 Sinorhizobium medicae WSM419 transketolase YP_001328146.1 2561742 R 366394 CDS YP_001328147.1 150397680 5323341 complement(2563919..2564923) 1 NC_009636.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMa0252 hypothetical protein; TRAP dicarboxylate transporter subunit DctP 2564923 5323341 Smed_2480 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctP YP_001328147.1 2563919 R 366394 CDS YP_001328148.1 150397681 5323342 complement(2564962..2566239) 1 NC_009636.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMa0250 conserved hypothetical DedA-like protein; TRAP dicarboxylate transporter subunit DctM 2566239 5323342 Smed_2481 Sinorhizobium medicae WSM419 TRAP dicarboxylate transporter subunit DctM YP_001328148.1 2564962 R 366394 CDS YP_001328149.1 150397682 5323343 complement(2566239..2566772) 1 NC_009636.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sme:SMa0249 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 2566772 5323343 Smed_2482 Sinorhizobium medicae WSM419 tripartite ATP-independent periplasmic transporter DctQ YP_001328149.1 2566239 R 366394 CDS YP_001328150.1 150397683 5323344 complement(2566791..2567969) 1 NC_009636.1 KEGG: sme:SMa0247 hypothetical protein; hypothetical protein 2567969 5323344 Smed_2483 Sinorhizobium medicae WSM419 hypothetical protein YP_001328150.1 2566791 R 366394 CDS YP_001328151.1 150397684 5323345 complement(2568133..2568849) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0246 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 2568849 5323345 Smed_2484 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328151.1 2568133 R 366394 CDS YP_001328152.1 150397685 5323346 complement(2568934..2570373) 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMa0244 hypothetical protein; FAD linked oxidase domain-containing protein 2570373 5323346 Smed_2485 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001328152.1 2568934 R 366394 CDS YP_001328153.1 150397686 5323347 2570565..2571548 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMa0241 hypothetical protein; NAD-dependent epimerase/dehydratase 2571548 5323347 Smed_2486 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001328153.1 2570565 D 366394 CDS YP_001328154.1 150397687 5323348 2571560..2572426 1 NC_009636.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMa0237 putative D-threonine; 2-hydroxy-3-oxopropionate reductase 2572426 5323348 Smed_2487 Sinorhizobium medicae WSM419 2-hydroxy-3-oxopropionate reductase YP_001328154.1 2571560 D 366394 CDS YP_001328155.1 150397688 5323349 2572435..2574213 1 NC_009636.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2574213 5323349 Smed_2488 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001328155.1 2572435 D 366394 CDS YP_001328156.1 150397689 5323351 2574943..2575329 1 NC_009636.1 KEGG: rso:RS05859 probable peptide synthetase protein; putative peptide synthetase 2575329 5323351 Smed_2490 Sinorhizobium medicae WSM419 putative peptide synthetase YP_001328156.1 2574943 D 366394 CDS YP_001328157.1 150397690 5323352 2575326..2576276 1 NC_009636.1 PFAM: periplasmic binding protein; KEGG: atu:Atu3688 ABC transporter, membrane spanning protein [iron(III) dicitrate]; periplasmic binding protein 2576276 5323352 Smed_2491 Sinorhizobium medicae WSM419 periplasmic binding protein YP_001328157.1 2575326 D 366394 CDS YP_001328158.1 150397691 5323353 2576278..2577300 1 NC_009636.1 PFAM: transport system permease protein; KEGG: atc:AGR_L_2296 iron(III) dicitrate transport system permease protein FecC; transport system permease 2577300 5323353 Smed_2492 Sinorhizobium medicae WSM419 transport system permease YP_001328158.1 2576278 D 366394 CDS YP_001328159.1 150397692 5323354 2577300..2578277 1 NC_009636.1 PFAM: transport system permease protein; KEGG: atc:AGR_L_2295 iron(III) dicitrate transport system permease protein FecD; transport system permease 2578277 5323354 Smed_2493 Sinorhizobium medicae WSM419 transport system permease YP_001328159.1 2577300 D 366394 CDS YP_001328160.1 150397693 5323355 2578270..2579076 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2292 iron (III) dicitrate transport system (permease); ABC transporter-like protein 2579076 5323355 Smed_2494 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328160.1 2578270 D 366394 CDS YP_001328161.1 150397694 5323356 complement(2579143..2581281) 1 NC_009636.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: atc:AGR_L_2303 hypothetical protein; TonB-dependent receptor 2581281 5323356 Smed_2495 Sinorhizobium medicae WSM419 TonB-dependent receptor YP_001328161.1 2579143 R 366394 CDS YP_001328162.1 150397695 5323357 complement(2581432..2582433) 1 NC_009636.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: pde:Pden_4240 FAD-binding 9, siderophore-interacting domain protein; siderophore-interacting protein 2582433 5323357 Smed_2496 Sinorhizobium medicae WSM419 siderophore-interacting protein YP_001328162.1 2581432 R 366394 CDS YP_001328163.1 150397696 5323365 2590558..2592498 1 NC_009636.1 PFAM: peptidase M23B; KEGG: sme:SMc02432 hypothetical protein; peptidase M23B 2592498 5323365 Smed_2498 Sinorhizobium medicae WSM419 peptidase M23B YP_001328163.1 2590558 D 366394 CDS YP_001328164.1 150397697 5323366 complement(2592576..2595182) 1 NC_009636.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sme:SMc02433 probable ATP-dependent protease (heat shock protein); ATPase 2595182 5323366 Smed_2499 Sinorhizobium medicae WSM419 ATPase YP_001328164.1 2592576 R 366394 CDS YP_001328165.1 150397698 5323367 complement(2595468..2596127) 1 NC_009636.1 KEGG: sme:SMc02434 hypothetical protein; hypothetical protein 2596127 5323367 Smed_2500 Sinorhizobium medicae WSM419 hypothetical protein YP_001328165.1 2595468 R 366394 CDS YP_001328166.1 150397699 5323368 complement(2596562..2597440) 1 NC_009636.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: sme:SMc02435 putative methyltransferase protein; HemK family modification methylase 2597440 5323368 Smed_2501 Sinorhizobium medicae WSM419 HemK family modification methylase YP_001328166.1 2596562 R 366394 CDS YP_001328167.1 150397700 5323369 complement(2597447..2598529) 1 NC_009636.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2598529 prfA 5323369 prfA Sinorhizobium medicae WSM419 peptide chain release factor 1 YP_001328167.1 2597447 R 366394 CDS YP_001328168.1 150397701 5323370 complement(2598598..2600865) 1 NC_009636.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sme:SMc02437 phosphotransferase system, enzyme I; phosphoenolpyruvate-protein phosphotransferase PtsP 2600865 5323370 Smed_2503 Sinorhizobium medicae WSM419 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001328168.1 2598598 R 366394 CDS YP_001328169.1 150397702 5323371 complement(2601055..2602329) 1 NC_009636.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2602329 5323371 Smed_2504 Sinorhizobium medicae WSM419 aspartate kinase YP_001328169.1 2601055 R 366394 CDS YP_001328170.1 150397703 5323372 2602890..2604410 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_CH01179 probable ABC transporter, ATP-binding protein; ABC transporter-like protein 2604410 5323372 Smed_2505 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328170.1 2602890 D 366394 CDS YP_001328171.1 150397704 5323373 2604673..2605419 1 NC_009636.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2605419 5323373 Smed_2506 Sinorhizobium medicae WSM419 3-demethylubiquinone-9 3-methyltransferase YP_001328171.1 2604673 D 366394 CDS YP_001328172.1 150397705 5323374 complement(2605432..2605860) 1 NC_009636.1 PFAM: protein of unknown function DUF1178; KEGG: sme:SMc02441 hypothetical protein; hypothetical protein 2605860 5323374 Smed_2507 Sinorhizobium medicae WSM419 hypothetical protein YP_001328172.1 2605432 R 366394 CDS YP_001328173.1 150397706 5323375 complement(2605857..2606714) 1 NC_009636.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sme:SMc02442 putative hydrolase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2606714 5323375 Smed_2508 Sinorhizobium medicae WSM419 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001328173.1 2605857 R 366394 CDS YP_001328174.1 150397707 5323376 complement(2606815..2607072) 1 NC_009636.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: sme:SMc02443 probable glutaredoxin 3 protein; glutaredoxin 3 2607072 5323376 Smed_2509 Sinorhizobium medicae WSM419 glutaredoxin 3 YP_001328174.1 2606815 R 366394 CDS YP_001328175.1 150397708 5323377 complement(2607124..2607900) 1 NC_009636.1 PFAM: phosphoribosyltransferase; KEGG: sme:SMc02444 hypothetical protein; phosphoribosyltransferase 2607900 5323377 Smed_2510 Sinorhizobium medicae WSM419 phosphoribosyltransferase YP_001328175.1 2607124 R 366394 CDS YP_001328176.1 150397709 5323378 2608061..2608960 1 NC_009636.1 KEGG: sme:SMc02445 hypothetical protein; hypothetical protein 2608960 5323378 Smed_2511 Sinorhizobium medicae WSM419 hypothetical protein YP_001328176.1 2608061 D 366394 CDS YP_001328177.1 150397710 5323379 complement(2608970..2609143) 1 NC_009636.1 PFAM: Flp/Fap pilin component; KEGG: sme:SMc02446 putative pilus assembly protein PilA; Flp/Fap pilin protein 2609143 5323379 Smed_2512 Sinorhizobium medicae WSM419 Flp/Fap pilin protein YP_001328177.1 2608970 R 366394 CDS YP_001328178.1 150397711 5323380 complement(2609237..2609557) 1 NC_009636.1 KEGG: sme:SMc02447 hypothetical protein; hypothetical protein 2609557 5323380 Smed_2513 Sinorhizobium medicae WSM419 hypothetical protein YP_001328178.1 2609237 R 366394 CDS YP_001328179.1 150397712 5323381 complement(2609970..2610377) 1 NC_009636.1 PFAM: NUDIX hydrolase; KEGG: sme:SMc02448 putative mutator protein 7,8-dihydro-8-oxoguanine-triphosphatase; NUDIX hydrolase 2610377 5323381 Smed_2514 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001328179.1 2609970 R 366394 CDS YP_001328180.1 150397713 5323382 complement(2610383..2611195) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc02449 putative acetyltransferase protein; N-acetyltransferase GCN5 2611195 5323382 Smed_2515 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328180.1 2610383 R 366394 CDS YP_001328181.1 150397714 5323383 complement(2611277..2612518) 1 NC_009636.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2612518 argJ 5323383 argJ Sinorhizobium medicae WSM419 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001328181.1 2611277 R 366394 CDS YP_001328182.1 150397715 5323384 complement(2612691..2613545) 1 NC_009636.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sme:SMc02451 putative outer membrane protein; PpiC-type peptidyl-prolyl cis-trans isomerase 2613545 5323384 Smed_2517 Sinorhizobium medicae WSM419 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001328182.1 2612691 R 366394 CDS YP_001328183.1 150397716 5323385 2613792..2616503 1 NC_009636.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2616503 5323385 Smed_2518 Sinorhizobium medicae WSM419 preprotein translocase subunit SecA YP_001328183.1 2613792 D 366394 CDS YP_001328184.1 150397717 5323386 2616683..2617882 1 NC_009636.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00744 putative transport protein transmembrane; Bcr/CflA subfamily drug resistance transporter 2617882 5323386 Smed_2519 Sinorhizobium medicae WSM419 Bcr/CflA subfamily drug resistance transporter YP_001328184.1 2616683 D 366394 CDS YP_001328185.1 150397718 5323387 2618009..2619433 1 NC_009636.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: sme:SMc00743 hypothetical protein; polysaccharide biosynthesis protein 2619433 5323387 Smed_2520 Sinorhizobium medicae WSM419 polysaccharide biosynthesis protein YP_001328185.1 2618009 D 366394 CDS YP_001328186.1 150397719 5323388 2619430..2620704 1 NC_009636.1 KEGG: sme:SMc00742 hypothetical protein; hypothetical protein 2620704 5323388 Smed_2521 Sinorhizobium medicae WSM419 hypothetical protein YP_001328186.1 2619430 D 366394 CDS YP_001328187.1 150397720 5323389 complement(2620720..2622363) 1 NC_009636.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMc00741 putative fatty-acid-CoA ligase protein; AMP-dependent synthetase and ligase 2622363 5323389 Smed_2522 Sinorhizobium medicae WSM419 AMP-dependent synthetase and ligase YP_001328187.1 2620720 R 366394 CDS YP_001328188.1 150397721 5323391 2623349..2623873 1 NC_009636.1 KEGG: sme:SMc00738 hypothetical protein; hypothetical protein 2623873 5323391 Smed_2523 Sinorhizobium medicae WSM419 hypothetical protein YP_001328188.1 2623349 D 366394 CDS YP_001328189.1 150397722 5323392 complement(2623891..2624541) 1 NC_009636.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sme:SMc00737 hypothetical protein; HNH endonuclease 2624541 5323392 Smed_2524 Sinorhizobium medicae WSM419 HNH endonuclease YP_001328189.1 2623891 R 366394 CDS YP_001328190.1 150397723 5323393 complement(2624555..2625202) 1 NC_009636.1 PFAM: HhH-GPD family protein; KEGG: sme:SMc00736 putative DNA-3-methyladenine glycosidase II protein; HhH-GPD family protein 2625202 5323393 Smed_2525 Sinorhizobium medicae WSM419 HhH-GPD family protein YP_001328190.1 2624555 R 366394 CDS YP_001328191.1 150397724 5323394 2625257..2626150 1 NC_009636.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 2626150 5323394 Smed_2526 Sinorhizobium medicae WSM419 glutamyl-Q tRNA(Asp) synthetase YP_001328191.1 2625257 D 366394 CDS YP_001328192.1 150397725 5323395 complement(2626168..2627040) 1 NC_009636.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: sme:SMc00734 putative ribonuclease RNase BN (RBN) transmembrane protein; putative ribonuclease BN 2627040 5323395 Smed_2527 Sinorhizobium medicae WSM419 putative ribonuclease BN YP_001328192.1 2626168 R 366394 CDS YP_001328193.1 150397726 5323396 2627206..2628039 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc00733 short chain dehydrogenase; short chain dehydrogenase 2628039 5323396 Smed_2528 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001328193.1 2627206 D 366394 CDS YP_001328194.1 150397727 5323397 2628062..2628265 1 NC_009636.1 KEGG: sme:SMc00732 hypothetical protein; hypothetical protein 2628265 5323397 Smed_2529 Sinorhizobium medicae WSM419 hypothetical protein YP_001328194.1 2628062 D 366394 CDS YP_001328195.1 150397728 5323398 2628334..2628912 1 NC_009636.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: sme:SMc00731 hypothetical protein; ATP--cobalamin adenosyltransferase 2628912 5323398 Smed_2530 Sinorhizobium medicae WSM419 ATP--cobalamin adenosyltransferase YP_001328195.1 2628334 D 366394 CDS YP_001328196.1 150397729 5323399 2629037..2629828 1 NC_009636.1 PFAM: Rhomboid family protein; KEGG: sme:SMc00730 hypothetical protein; rhomboid family protein 2629828 5323399 Smed_2531 Sinorhizobium medicae WSM419 rhomboid family protein YP_001328196.1 2629037 D 366394 CDS YP_001328197.1 150397730 5323400 2630141..2630890 1 NC_009636.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sme:SMc00729 putative electron transfer flavoprotein beta-subunit beta-ETF flavoprotein small subunit; electron transfer flavoprotein subunit alpha/beta 2630890 5323400 Smed_2532 Sinorhizobium medicae WSM419 electron transfer flavoprotein subunit alpha/beta YP_001328197.1 2630141 D 366394 CDS YP_001328198.1 150397731 5323401 2630914..2631843 1 NC_009636.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: sme:SMc00728 putative electron transfer flavoprotein alpha-subunit alpha-ETF flavoprotein; electron transfer flavoprotein subunit alpha 2631843 5323401 Smed_2533 Sinorhizobium medicae WSM419 electron transfer flavoprotein subunit alpha YP_001328198.1 2630914 D 366394 CDS YP_001328199.1 150397732 5323402 2631987..2632859 1 NC_009636.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 2632859 5323402 Smed_2534 Sinorhizobium medicae WSM419 3-hydroxybutyryl-CoA dehydrogenase YP_001328199.1 2631987 D 366394 CDS YP_001328200.1 150397733 5323403 complement(2632897..2633571) 1 NC_009636.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMc00726 putative thiol:disulfide interchange redox-active center transmembrane protein; redoxin domain-containing protein 2633571 5323403 Smed_2535 Sinorhizobium medicae WSM419 redoxin domain-containing protein YP_001328200.1 2632897 R 366394 CDS YP_001328201.1 150397734 5323404 2633597..2635000 1 NC_009636.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2635000 5323404 Smed_2536 Sinorhizobium medicae WSM419 argininosuccinate lyase YP_001328201.1 2633597 D 366394 CDS YP_001328202.1 150397735 5323405 2635220..2635414 1 NC_009636.1 KEGG: sme:SMc00724 hypothetical/unknown protein; hypothetical protein 2635414 5323405 Smed_2537 Sinorhizobium medicae WSM419 hypothetical protein YP_001328202.1 2635220 D 366394 CDS YP_001328203.1 150397736 5323406 2635429..2636697 1 NC_009636.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sme:SMc00723 probable diaminopimelate DAP decarboxylase protein; diaminopimelate decarboxylase 2636697 5323406 Smed_2538 Sinorhizobium medicae WSM419 diaminopimelate decarboxylase YP_001328203.1 2635429 D 366394 CDS YP_001328204.1 150397737 5323407 2636838..2639492 1 NC_009636.1 KEGG: sme:SMc00722 hypothetical protein; hypothetical protein 2639492 5323407 Smed_2539 Sinorhizobium medicae WSM419 hypothetical protein YP_001328204.1 2636838 D 366394 CDS YP_001328205.1 150397738 5323408 complement(2639706..2640065) 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc00720 putative 2-component receiver domain protein; response regulator receiver protein 2640065 5323408 Smed_2540 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001328205.1 2639706 R 366394 CDS YP_001328206.1 150397739 5323409 complement(2640280..2640825) 1 NC_009636.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: sme:SMc00719 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 2640825 5323409 Smed_2541 Sinorhizobium medicae WSM419 hypoxanthine phosphoribosyltransferase YP_001328206.1 2640280 R 366394 CDS YP_001328207.1 150397740 5323410 complement(2641074..2641493) 1 NC_009636.1 KEGG: sme:SMc00718 hypothetical protein; hypothetical protein 2641493 5323410 Smed_2542 Sinorhizobium medicae WSM419 hypothetical protein YP_001328207.1 2641074 R 366394 CDS YP_001328208.1 150397741 5323411 2641960..2642643 1 NC_009636.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00717 putative ATP-binding ABC transporter protein; cell division ATP-binding protein FtsE 2642643 5323411 Smed_2543 Sinorhizobium medicae WSM419 cell division ATP-binding protein FtsE YP_001328208.1 2641960 D 366394 CDS YP_001328209.1 150397742 5323412 2642636..2643655 1 NC_009636.1 KEGG: sme:SMc00716 hypothetical transmembrane protein; hypothetical protein 2643655 5323412 Smed_2544 Sinorhizobium medicae WSM419 hypothetical protein YP_001328209.1 2642636 D 366394 CDS YP_001328210.1 150397743 5323413 2643761..2644459 1 NC_009636.1 PFAM: protein of unknown function DUF218; KEGG: sme:SMc00715 hypothetical protein; hypothetical protein 2644459 5323413 Smed_2545 Sinorhizobium medicae WSM419 hypothetical protein YP_001328210.1 2643761 D 366394 CDS YP_001328211.1 150397744 5323414 2644593..2645372 1 NC_009636.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sme:SMc00714 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase (PlsC) protein; phospholipid/glycerol acyltransferase 2645372 5323414 Smed_2546 Sinorhizobium medicae WSM419 phospholipid/glycerol acyltransferase YP_001328211.1 2644593 D 366394 CDS YP_001328212.1 150397745 5323415 complement(2645393..2645962) 1 NC_009636.1 PFAM: ChaC family protein; KEGG: sme:SMc00713 putative cation transport protein; ChaC family protein 2645962 5323415 Smed_2547 Sinorhizobium medicae WSM419 ChaC family protein YP_001328212.1 2645393 R 366394 CDS YP_001328213.1 150397746 5323416 2646218..2647231 1 NC_009636.1 KEGG: sme:SMc00712 hypothetical protein; hypothetical protein 2647231 5323416 Smed_2548 Sinorhizobium medicae WSM419 hypothetical protein YP_001328213.1 2646218 D 366394 CDS YP_001328214.1 150397747 5323417 complement(2647319..2648245) 1 NC_009636.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 2648245 5323417 Smed_2549 Sinorhizobium medicae WSM419 cyclohexadienyl dehydrogenase YP_001328214.1 2647319 R 366394 CDS YP_001328215.1 150397748 5323418 complement(2648242..2649348) 1 NC_009636.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2649348 5323418 Smed_2550 Sinorhizobium medicae WSM419 histidinol-phosphate aminotransferase YP_001328215.1 2648242 R 366394 CDS YP_001328216.1 150397749 5323419 complement(2649454..2650206) 1 NC_009636.1 PFAM: Methyltransferase type 11; KEGG: sme:SMc00709 hypothetical protein; type 11 methyltransferase 2650206 5323419 Smed_2551 Sinorhizobium medicae WSM419 type 11 methyltransferase YP_001328216.1 2649454 R 366394 CDS YP_001328217.1 150397750 5323420 2650305..2651075 1 NC_009636.1 PFAM: beta-lactamase domain protein; KEGG: sme:SMc00708 putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein; hydroxyacylglutathione hydrolase 2651075 5323420 Smed_2552 Sinorhizobium medicae WSM419 hydroxyacylglutathione hydrolase YP_001328217.1 2650305 D 366394 CDS YP_001328218.1 150397751 5323421 2651075..2651539 1 NC_009636.1 PFAM: protein of unknown function DUF985; KEGG: sme:SMc00707 hypothetical protein; hypothetical protein 2651539 5323421 Smed_2553 Sinorhizobium medicae WSM419 hypothetical protein YP_001328218.1 2651075 D 366394 CDS YP_001328219.1 150397752 5323422 complement(2651603..2652493) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00706 hypothetical protein; hypothetical protein 2652493 5323422 Smed_2554 Sinorhizobium medicae WSM419 hypothetical protein YP_001328219.1 2651603 R 366394 CDS YP_001328220.1 150397753 5323423 complement(2652630..2653406) 1 NC_009636.1 KEGG: sme:SMc00705 conserved hypothetical signal peptide protein; putative signal peptide protein 2653406 5323423 Smed_2555 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328220.1 2652630 R 366394 CDS YP_001328221.1 150397754 5323424 2653835..2654125 1 NC_009636.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2654125 rpmB 5323424 rpmB Sinorhizobium medicae WSM419 50S ribosomal protein L28 YP_001328221.1 2653835 D 366394 CDS YP_001328222.1 150397755 5323425 2654261..2654899 1 NC_009636.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: sme:SMc00703 hypothetical protein; hypothetical protein 2654899 5323425 Smed_2557 Sinorhizobium medicae WSM419 hypothetical protein YP_001328222.1 2654261 D 366394 CDS YP_001328223.1 150397756 5323426 complement(2654946..2655938) 1 NC_009636.1 KEGG: sme:SMc00702 hypothetical signal peptide protein; putative signal peptide protein 2655938 5323426 Smed_2558 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328223.1 2654946 R 366394 CDS YP_001328224.1 150397757 5323427 complement(2656021..2657916) 1 NC_009636.1 KEGG: sme:SMc00701 probable cobalamin biosynthesis protein; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A; cobalt chelatase large subunit 2657916 5323427 Smed_2559 Sinorhizobium medicae WSM419 cobalt chelatase large subunit YP_001328224.1 2656021 R 366394 CDS YP_001328225.1 150397758 5323428 complement(2658056..2659051) 1 NC_009636.1 TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: sme:SMc00700 probable cobalamin biosynthesis protein; cobalt chelatase small subunit 2659051 5323428 Smed_2560 Sinorhizobium medicae WSM419 cobalt chelatase small subunit YP_001328225.1 2658056 R 366394 CDS YP_001328226.1 150397759 5323429 complement(2659127..2659762) 1 NC_009636.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sme:SMc00699 hypothetical protein; heat shock protein DnaJ domain-containing protein 2659762 5323429 Smed_2561 Sinorhizobium medicae WSM419 heat shock protein DnaJ domain-containing protein YP_001328226.1 2659127 R 366394 CDS YP_001328227.1 150397760 5323430 2659903..2660184 1 NC_009636.1 PFAM: BolA family protein; KEGG: sme:SMc00698 putative transcription regulator protein; BolA family protein 2660184 5323430 Smed_2562 Sinorhizobium medicae WSM419 BolA family protein YP_001328227.1 2659903 D 366394 CDS YP_001328228.1 150397761 5323431 complement(2660206..2661510) 1 NC_009636.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: sme:SMc00697 hypothetical protein; hypothetical protein 2661510 5323431 Smed_2563 Sinorhizobium medicae WSM419 hypothetical protein YP_001328228.1 2660206 R 366394 CDS YP_001328229.1 150397762 5323432 complement(2661507..2662649) 1 NC_009636.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2662649 aroB 5323432 aroB Sinorhizobium medicae WSM419 3-dehydroquinate synthase YP_001328229.1 2661507 R 366394 CDS YP_001328230.1 150397763 5323433 complement(2662646..2663224) 1 NC_009636.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2663224 5323433 Smed_2565 Sinorhizobium medicae WSM419 shikimate kinase YP_001328230.1 2662646 R 366394 CDS YP_001328231.1 150397764 5323434 2663552..2663701 1 NC_009636.1 KEGG: sme:SMc00692 hypothetical signal peptide protein; putative signal peptide protein 2663701 5323434 Smed_2566 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328231.1 2663552 D 366394 CDS YP_001328232.1 150397765 5323435 2663698..2664639 1 NC_009636.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 2664639 xerD 5323435 xerD Sinorhizobium medicae WSM419 site-specific tyrosine recombinase XerD YP_001328232.1 2663698 D 366394 CDS YP_001328233.1 150397766 5323436 2664703..2665656 1 NC_009636.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2665656 5323436 Smed_2568 Sinorhizobium medicae WSM419 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001328233.1 2664703 D 366394 CDS YP_001328234.1 150397767 5323437 2665898..2667343 1 NC_009636.1 PFAM: protein of unknown function DUF949; KEGG: sme:SMc00689 hypothetical lipoprotein; hypothetical protein 2667343 5323437 Smed_2569 Sinorhizobium medicae WSM419 hypothetical protein YP_001328234.1 2665898 D 366394 CDS YP_001328235.1 150397768 5323438 2667343..2667579 1 NC_009636.1 PFAM: SirA family protein; KEGG: sme:SMc00688 hypothetical protein; SirA family protein 2667579 5323438 Smed_2570 Sinorhizobium medicae WSM419 SirA family protein YP_001328235.1 2667343 D 366394 CDS YP_001328236.1 150397769 5323439 complement(2667649..2668797) 1 NC_009636.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sme:SMc00684 hypothetical protein; cobalamin synthesis protein P47K 2668797 5323439 Smed_2571 Sinorhizobium medicae WSM419 cobalamin synthesis protein P47K YP_001328236.1 2667649 R 366394 CDS YP_001328237.1 150397770 5323440 complement(2668810..2669940) 1 NC_009636.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: sme:SMc00683 putative penicillin-binding protein; serine-type D-Ala-D-Ala carboxypeptidase 2669940 5323440 Smed_2572 Sinorhizobium medicae WSM419 serine-type D-Ala-D-Ala carboxypeptidase YP_001328237.1 2668810 R 366394 CDS YP_001328238.1 150397771 5323441 2670146..2671309 1 NC_009636.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sme:SMc00682 putative hippurate hydrolase protein; amidohydrolase 2671309 5323441 Smed_2573 Sinorhizobium medicae WSM419 amidohydrolase YP_001328238.1 2670146 D 366394 CDS YP_001328239.1 150397772 5323442 2671333..2671797 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; regulatory protein ArsR; KEGG: sme:SMc00681 probable leucine-responsive regulatorY protein; AsnC family transcriptional regulator 2671797 5323442 Smed_2574 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001328239.1 2671333 D 366394 CDS YP_001328240.1 150397773 5323443 complement(2671821..2672864) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc00680 putative zinc-type alcohol dehydrogenase protein; alcohol dehydrogenase 2672864 5323443 Smed_2575 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328240.1 2671821 R 366394 CDS YP_001328241.1 150397774 5323444 2673083..2674024 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: sme:SMc00679 putative transcription regulator protein; AraC-like transcriptional regulator 2674024 5323444 Smed_2576 Sinorhizobium medicae WSM419 AraC-like transcriptional regulator YP_001328241.1 2673083 D 366394 CDS YP_001328242.1 150397775 5323445 complement(2674077..2674574) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc00678 putative transcription regulator protein; AsnC family transcriptional regulator 2674574 5323445 Smed_2577 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001328242.1 2674077 R 366394 CDS YP_001328243.1 150397776 5323446 2674641..2677697 1 NC_009636.1 PFAM: aminoglycoside phosphotransferase; peptidase M23B; aminotransferase class-III; KEGG: sme:SMc00677 hypothetical protein; hypothetical protein 2677697 5323446 Smed_2578 Sinorhizobium medicae WSM419 hypothetical protein YP_001328243.1 2674641 D 366394 CDS YP_001328244.1 150397777 5323447 2677799..2678809 1 NC_009636.1 SMART: extracellular solute-binding protein family 3; KEGG: sme:SMc00676 putative amino acid-binding periplasmic signal peptide protein; extracellular solute-binding protein 2678809 5323447 Smed_2579 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328244.1 2677799 D 366394 CDS YP_001328245.1 150397778 5323448 complement(2678871..2681798) 1 NC_009636.1 PFAM: aminoglycoside phosphotransferase; aminotransferase class-III; KEGG: sme:SMc00675 hypothetical protein; hypothetical protein 2681798 5323448 Smed_2580 Sinorhizobium medicae WSM419 hypothetical protein YP_001328245.1 2678871 R 366394 CDS YP_001328246.1 150397779 5323449 complement(2681831..2682574) 1 NC_009636.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc00674 putative histidine utilization repressor transcription regulator protein; GntR family transcriptional regulator 2682574 5323449 Smed_2581 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328246.1 2681831 R 366394 CDS YP_001328247.1 150397780 5323450 2682701..2684074 1 NC_009636.1 catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; N-formimino-L-glutamate deiminase 2684074 5323450 Smed_2582 Sinorhizobium medicae WSM419 N-formimino-L-glutamate deiminase YP_001328247.1 2682701 D 366394 CDS YP_001328248.1 150397781 5323451 2684111..2685145 1 NC_009636.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: sme:SMc00672 histidine-binding periplasmic signal peptide protein; glycine betaine ABC transporter substrate-binding protein 2685145 5323451 Smed_2583 Sinorhizobium medicae WSM419 glycine betaine ABC transporter substrate-binding protein YP_001328248.1 2684111 D 366394 CDS YP_001328249.1 150397782 5323452 2685277..2686134 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc00671 histidine transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2686134 5323452 Smed_2584 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328249.1 2685277 D 366394 CDS YP_001328250.1 150397783 5323453 2686127..2686954 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc00670 histidine transport ATP-binding ABC transporter protein; ABC transporter-like protein 2686954 5323453 Smed_2585 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328250.1 2686127 D 366394 CDS YP_001328251.1 150397784 5323454 2686947..2688461 1 NC_009636.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: sme:SMc00669 putative histidine ammonia-lyase protein; histidine ammonia-lyase 2688461 5323454 Smed_2586 Sinorhizobium medicae WSM419 histidine ammonia-lyase YP_001328251.1 2686947 D 366394 CDS YP_001328252.1 150397785 5323455 2688482..2689807 1 NC_009636.1 PFAM: nucleoside recognition domain protein; KEGG: sme:SMc00668 hypothetical, transmembrane protein; nucleoside recognition domain-containing protein 2689807 5323455 Smed_2587 Sinorhizobium medicae WSM419 nucleoside recognition domain-containing protein YP_001328252.1 2688482 D 366394 CDS YP_001328253.1 150397786 5323456 2689795..2690388 1 NC_009636.1 PFAM: protein of unknown function DUF886; KEGG: sme:SMc00667 hypothetical protein; hypothetical protein 2690388 5323456 Smed_2588 Sinorhizobium medicae WSM419 hypothetical protein YP_001328253.1 2689795 D 366394 CDS YP_001328254.1 150397787 5323457 complement(2690391..2690624) 1 NC_009636.1 KEGG: sme:SMc00666 hypothetical protein; hypothetical protein 2690624 5323457 Smed_2589 Sinorhizobium medicae WSM419 hypothetical protein YP_001328254.1 2690391 R 366394 CDS YP_001328255.1 150397788 5323458 complement(2690747..2690935) 1 NC_009636.1 KEGG: sme:SMc00665 hypothetical/unknown protein; hypothetical protein 2690935 5323458 Smed_2590 Sinorhizobium medicae WSM419 hypothetical protein YP_001328255.1 2690747 R 366394 CDS YP_001328256.1 150397789 5323459 2691164..2691364 1 NC_009636.1 KEGG: sme:SMc00664 hypothetical signal peptide protein; putative signal peptide protein 2691364 5323459 Smed_2591 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328256.1 2691164 D 366394 CDS YP_001328257.1 150397790 5323460 complement(2691445..2691645) 1 NC_009636.1 KEGG: sme:SMc00663 hypothetical protein; hypothetical protein 2691645 5323460 Smed_2592 Sinorhizobium medicae WSM419 hypothetical protein YP_001328257.1 2691445 R 366394 CDS YP_001328258.1 150397791 5323461 complement(2691627..2691860) 1 NC_009636.1 KEGG: sme:SMc00662 hypothetical/unknown protein; hypothetical protein 2691860 5323461 Smed_2593 Sinorhizobium medicae WSM419 hypothetical protein YP_001328258.1 2691627 R 366394 CDS YP_001328259.1 150397792 5323462 complement(2692054..2692380) 1 NC_009636.1 KEGG: sme:SMc00660 hypothetical signal peptide protein; putative signal peptide protein 2692380 5323462 Smed_2594 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328259.1 2692054 R 366394 CDS YP_001328260.1 150397793 5323463 complement(2692638..2693081) 1 NC_009636.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc01714 hypothetical protein; endoribonuclease L-PSP 2693081 5323463 Smed_2595 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001328260.1 2692638 R 366394 CDS YP_001328261.1 150397794 5323464 2693314..2694087 1 NC_009636.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sme:SMc01715 hypothetical protein; TetR family transcriptional regulator 2694087 5323464 Smed_2596 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001328261.1 2693314 D 366394 CDS YP_001328262.1 150397795 5323465 complement(2694095..2694994) 1 NC_009636.1 KEGG: pfo:Pfl_2954 beta-lactamase-like; beta-lactamase-like protein 2694994 5323465 Smed_2597 Sinorhizobium medicae WSM419 beta-lactamase-like protein YP_001328262.1 2694095 R 366394 CDS YP_001328263.1 150397796 5323466 complement(2695030..2695575) 1 NC_009636.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMa1724 hypothetical protein; isochorismatase hydrolase 2695575 5323466 Smed_2598 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001328263.1 2695030 R 366394 CDS YP_001328264.1 150397797 5323467 2695628..2696659 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMa1725 putative AraC-family transcriptional regulator; AraC family transcriptional regulator 2696659 5323467 Smed_2599 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001328264.1 2695628 D 366394 CDS YP_001328265.1 150397798 5323469 complement(2697759..2698955) 1 NC_009636.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2698955 mnmA 5323469 mnmA Sinorhizobium medicae WSM419 tRNA-specific 2-thiouridylase MnmA YP_001328265.1 2697759 R 366394 CDS YP_001328266.1 150397799 5323470 complement(2699229..2699972) 1 NC_009636.1 PFAM: regulatory protein LuxR; KEGG: sme:SMc00658 putative transcription regulator protein; regulatory protein LuxR 2699972 5323470 Smed_2601 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001328266.1 2699229 R 366394 CDS YP_001328267.1 150397800 5323471 2700351..2700626 1 NC_009636.1 PFAM: protein of unknown function DUF1153; KEGG: sme:SMc00657 hypothetical protein; hypothetical protein 2700626 5323471 Smed_2602 Sinorhizobium medicae WSM419 hypothetical protein YP_001328267.1 2700351 D 366394 CDS YP_001328268.1 150397801 5323472 2700827..2701108 1 NC_009636.1 KEGG: sme:SMc00656 hypothetical protein; hypothetical protein 2701108 5323472 Smed_2603 Sinorhizobium medicae WSM419 hypothetical protein YP_001328268.1 2700827 D 366394 CDS YP_001328269.1 150397802 5323473 complement(2701219..2701569) 1 NC_009636.1 KEGG: sme:SMc00655 hypothetical protein; hypothetical protein 2701569 5323473 Smed_2604 Sinorhizobium medicae WSM419 hypothetical protein YP_001328269.1 2701219 R 366394 CDS YP_001328270.1 150397803 5323474 2702115..2702816 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc00654 response regulator,controls chromosomal replication initiation protein; two component transcriptional regulator 2702816 5323474 Smed_2605 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001328270.1 2702115 D 366394 CDS YP_001328271.1 150397804 5323475 2703008..2703307 1 NC_009636.1 hypothetical protein 2703307 5323475 Smed_2606 Sinorhizobium medicae WSM419 hypothetical protein YP_001328271.1 2703008 D 366394 CDS YP_001328272.1 150397805 5323476 complement(2703353..2703715) 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc00653 putative 2-component receiver domain protein; response regulator receiver protein 2703715 5323476 Smed_2607 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001328272.1 2703353 R 366394 CDS YP_001328273.1 150397806 5323477 complement(2703926..2704588) 1 NC_009636.1 KEGG: sme:SMc00652 hypothetical protein; hypothetical protein 2704588 5323477 Smed_2608 Sinorhizobium medicae WSM419 hypothetical protein YP_001328273.1 2703926 R 366394 CDS YP_001328274.1 150397807 5323478 2704955..2705554 1 NC_009636.1 PFAM: uncharacterised conserved protein UCP033924; KEGG: sme:SMc00651 hypothetical protein; hypothetical protein 2705554 5323478 Smed_2609 Sinorhizobium medicae WSM419 hypothetical protein YP_001328274.1 2704955 D 366394 CDS YP_001328275.1 150397808 5323479 2705707..2706789 1 NC_009636.1 KEGG: sme:SMc00650 hypothetical protein; hypothetical protein 2706789 5323479 Smed_2610 Sinorhizobium medicae WSM419 hypothetical protein YP_001328275.1 2705707 D 366394 CDS YP_001328276.1 150397809 5323480 complement(2706857..2707684) 1 NC_009636.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sme:SMc00649 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 2707684 5323480 Smed_2611 Sinorhizobium medicae WSM419 tRNA/rRNA methyltransferase SpoU YP_001328276.1 2706857 R 366394 CDS YP_001328277.1 150397810 5323481 complement(2707689..2708072) 1 NC_009636.1 KEGG: sme:SMc00648 hypothetical protein; hypothetical protein 2708072 5323481 Smed_2612 Sinorhizobium medicae WSM419 hypothetical protein YP_001328277.1 2707689 R 366394 CDS YP_001328278.1 150397811 5323482 2708116..2709147 1 NC_009636.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sme:SMc00647 putative ribosomal large subunit pseudouridine synthase protein; RluA family pseudouridine synthase 2709147 5323482 Smed_2613 Sinorhizobium medicae WSM419 RluA family pseudouridine synthase YP_001328278.1 2708116 D 366394 CDS YP_001328279.1 150397812 5323483 2709345..2710250 1 NC_009636.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 2710250 5323483 Smed_2614 Sinorhizobium medicae WSM419 RNA polymerase factor sigma-32 YP_001328279.1 2709345 D 366394 CDS YP_001328280.1 150397813 5323484 complement(2710335..2712635) 1 NC_009636.1 KEGG: sme:SMc00644 hypothetical protein; hypothetical protein 2712635 5323484 Smed_2615 Sinorhizobium medicae WSM419 hypothetical protein YP_001328280.1 2710335 R 366394 CDS YP_001328281.1 150397814 5323485 complement(2712699..2713997) 1 NC_009636.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 2713997 5323485 Smed_2616 Sinorhizobium medicae WSM419 adenylosuccinate synthetase YP_001328281.1 2712699 R 366394 CDS YP_001328282.1 150397815 5323486 2714117..2715094 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00642 hypothetical protein; hypothetical protein 2715094 5323486 Smed_2617 Sinorhizobium medicae WSM419 hypothetical protein YP_001328282.1 2714117 D 366394 CDS YP_001328283.1 150397816 5323487 complement(2715154..2716749) 1 NC_009636.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2716749 5323487 Smed_2618 Sinorhizobium medicae WSM419 D-3-phosphoglycerate dehydrogenase YP_001328283.1 2715154 R 366394 CDS YP_001328284.1 150397817 5323488 complement(2716829..2718007) 1 NC_009636.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 2718007 5323488 Smed_2619 Sinorhizobium medicae WSM419 phosphoserine aminotransferase YP_001328284.1 2716829 R 366394 CDS YP_001328285.1 150397818 5323489 complement(2718145..2718942) 1 NC_009636.1 KEGG: sme:SMc00639 putative heat resistant agglutinin 1 signal peptide protein; putative heat resistant agglutinin 1 signal peptide protein 2718942 5323489 Smed_2620 Sinorhizobium medicae WSM419 putative heat resistant agglutinin 1 signal peptide protein YP_001328285.1 2718145 R 366394 CDS YP_001328286.1 150397819 5323490 complement(2719134..2719961) 1 NC_009636.1 PFAM: porin opacity type; KEGG: sme:SMc00638 putative heat resistant agglutinin 1 protein; opacity type porin 2719961 5323490 Smed_2621 Sinorhizobium medicae WSM419 opacity type porin YP_001328286.1 2719134 R 366394 CDS YP_001328287.1 150397820 5323491 complement(2720203..2721558) 1 NC_009636.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2721558 glmM 5323491 glmM Sinorhizobium medicae WSM419 phosphoglucosamine mutase YP_001328287.1 2720203 R 366394 CDS YP_001328288.1 150397821 5323492 complement(2721994..2723931) 1 NC_009636.1 KEGG: sme:SMc04459 probable metalloprotease transmembrane protein; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2723931 5323492 Smed_2623 Sinorhizobium medicae WSM419 ATP-dependent metalloprotease FtsH YP_001328288.1 2721994 R 366394 CDS YP_001328289.1 150397822 5323493 complement(2724031..2725392) 1 NC_009636.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: sme:SMc02940 hypothetical protein; tRNA(Ile)-lysidine synthetase 2725392 5323493 Smed_2624 Sinorhizobium medicae WSM419 tRNA(Ile)-lysidine synthetase YP_001328289.1 2724031 R 366394 CDS YP_001328290.1 150397823 5323494 complement(2725404..2726441) 1 NC_009636.1 TIGRFAM: Tol-Pal system YbgF; KEGG: sme:SMc02941 hypothetical protein; Tol-Pal system protein YbgF 2726441 5323494 Smed_2625 Sinorhizobium medicae WSM419 Tol-Pal system protein YbgF YP_001328290.1 2725404 R 366394 CDS YP_001328291.1 150397824 5323495 complement(2726633..2727163) 1 NC_009636.1 TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: sme:SMc02942 probable peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated lipoprotein 2727163 5323495 Smed_2626 Sinorhizobium medicae WSM419 peptidoglycan-associated lipoprotein YP_001328291.1 2726633 R 366394 CDS YP_001328292.1 150397825 5323496 complement(2727533..2728843) 1 NC_009636.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2728843 tolB 5323496 tolB Sinorhizobium medicae WSM419 translocation protein TolB YP_001328292.1 2727533 R 366394 CDS YP_001328293.1 150397826 5323497 complement(2728907..2729977) 1 NC_009636.1 KEGG: sme:SMc03956 hypothetical signal peptide protein; putative signal peptide protein 2729977 5323497 Smed_2628 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328293.1 2728907 R 366394 CDS YP_001328294.1 150397827 5323498 complement(2729986..2730435) 1 NC_009636.1 TIGRFAM: Biopolymer transport TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sme:SMc03957 putative transport transmembrane protein; biopolymer transport TolR 2730435 5323498 Smed_2629 Sinorhizobium medicae WSM419 biopolymer transport TolR YP_001328294.1 2729986 R 366394 CDS YP_001328295.1 150397828 5323499 complement(2730463..2731182) 1 NC_009636.1 TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: sme:SMc03958 putative transport transmembrane protein; Tol-Pal system protein TolQ 2731182 5323499 Smed_2630 Sinorhizobium medicae WSM419 Tol-Pal system protein TolQ YP_001328295.1 2730463 R 366394 CDS YP_001328296.1 150397829 5323500 2731583..2734180 1 NC_009636.1 TIGRFAM: DNA ligase D; DNA ligase D 3'-phosphoesterase domain; DNA polymerase LigD polymerase domain; DNA polymerase LigD ligase region; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: sme:SMc03959 hypothetical protein; DNA ligase D 2734180 5323500 Smed_2631 Sinorhizobium medicae WSM419 DNA ligase D YP_001328296.1 2731583 D 366394 CDS YP_001328297.1 150397830 5323501 complement(2734298..2734741) 1 NC_009636.1 TIGRFAM: Pol-Pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: sme:SMc03960 hypothetical protein; Pol-Pal system-associated acyl-CoA thioesterase 2734741 5323501 Smed_2632 Sinorhizobium medicae WSM419 Pol-Pal system-associated acyl-CoA thioesterase YP_001328297.1 2734298 R 366394 CDS YP_001328298.1 150397831 5323502 2734869..2736089 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sme:SMc03961 sulfolipid (UDP-sulfoquinovose) biosynthesis protein; NAD-dependent epimerase/dehydratase 2736089 5323502 Smed_2633 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001328298.1 2734869 D 366394 CDS YP_001328299.1 150397832 5323503 2736086..2736964 1 NC_009636.1 PFAM: glycosyl transferase family 8; KEGG: sme:SMc04081 glycosyl transferase (sulfolipid biosynthesis) protein; glycosyl transferase family protein 2736964 5323503 Smed_2634 Sinorhizobium medicae WSM419 glycosyl transferase family protein YP_001328299.1 2736086 D 366394 CDS YP_001328300.1 150397833 5323504 2736961..2737866 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc03963 sulfolipid biosynthesis protein; NAD-dependent epimerase/dehydratase 2737866 5323504 Smed_2635 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001328300.1 2736961 D 366394 CDS YP_001328301.1 150397834 5323505 complement(2737895..2738797) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc03964 hypothetical transmembrane protein; metallophosphoesterase 2738797 5323505 Smed_2636 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001328301.1 2737895 R 366394 CDS YP_001328302.1 150397835 5323506 complement(2738799..2739839) 1 NC_009636.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2739839 ruvB 5323506 ruvB Sinorhizobium medicae WSM419 Holliday junction DNA helicase RuvB YP_001328302.1 2738799 R 366394 CDS YP_001328303.1 150397836 5323507 complement(2740014..2740631) 1 NC_009636.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2740631 ruvA 5323507 ruvA Sinorhizobium medicae WSM419 Holliday junction DNA helicase RuvA YP_001328303.1 2740014 R 366394 CDS YP_001328304.1 150397837 5323508 complement(2740691..2741194) 1 NC_009636.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2741194 ruvC 5323508 ruvC Sinorhizobium medicae WSM419 Holliday junction resolvase YP_001328304.1 2740691 R 366394 CDS YP_001328305.1 150397838 5323509 2741373..2742404 1 NC_009636.1 PFAM: luciferase family protein; KEGG: sme:SMc03968 putative oxidoreductase protein; luciferase family protein 2742404 5323509 Smed_2640 Sinorhizobium medicae WSM419 luciferase family protein YP_001328305.1 2741373 D 366394 CDS YP_001328306.1 150397839 5323510 complement(2742353..2743099) 1 NC_009636.1 PFAM: protein of unknown function DUF28; KEGG: sme:SMc03969 hypothetical protein; hypothetical protein 2743099 5323510 Smed_2641 Sinorhizobium medicae WSM419 hypothetical protein YP_001328306.1 2742353 R 366394 CDS YP_001328307.1 150397840 5323511 complement(2743248..2744081) 1 NC_009636.1 KEGG: sme:SMc03970 hypothetical protein; hypothetical protein 2744081 5323511 Smed_2642 Sinorhizobium medicae WSM419 hypothetical protein YP_001328307.1 2743248 R 366394 CDS YP_001328308.1 150397841 5323512 complement(2744253..2747429) 1 NC_009636.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sme:SMc03971 probable multidrug-efflux system transmembrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2747429 5323512 Smed_2643 Sinorhizobium medicae WSM419 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001328308.1 2744253 R 366394 CDS YP_001328309.1 150397842 5323513 complement(2747426..2748583) 1 NC_009636.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc03972 putative multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit 2748583 5323513 Smed_2644 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001328309.1 2747426 R 366394 CDS YP_001328310.1 150397843 5323514 complement(2748939..2749763) 1 NC_009636.1 PFAM: metallophosphoesterase; KEGG: sme:SMc03973 hypothetical protein; metallophosphoesterase 2749763 5323514 Smed_2645 Sinorhizobium medicae WSM419 metallophosphoesterase YP_001328310.1 2748939 R 366394 CDS YP_001328311.1 150397844 5323515 complement(2749871..2750452) 1 NC_009636.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: sme:SMc03974 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 2750452 5323515 Smed_2646 Sinorhizobium medicae WSM419 5-formyltetrahydrofolate cyclo-ligase YP_001328311.1 2749871 R 366394 CDS YP_001328312.1 150397845 5323516 2750954..2751934 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc03975 putative transcription regulator protein; LysR family transcriptional regulator 2751934 5323516 Smed_2647 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328312.1 2750954 D 366394 CDS YP_001328313.1 150397846 5323517 complement(2752126..2752503) 1 NC_009636.1 PFAM: protein of unknown function DUF710; KEGG: sme:SMc03976 hypothetical protein; hypothetical protein 2752503 5323517 Smed_2648 Sinorhizobium medicae WSM419 hypothetical protein YP_001328313.1 2752126 R 366394 CDS YP_001328314.1 150397847 5323518 complement(2752516..2752785) 1 NC_009636.1 KEGG: sme:SMc03977 hypothetical protein; hypothetical protein 2752785 5323518 Smed_2649 Sinorhizobium medicae WSM419 hypothetical protein YP_001328314.1 2752516 R 366394 CDS YP_001328315.1 150397848 5323519 2753171..2755126 1 NC_009636.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 2755126 5323519 Smed_2650 Sinorhizobium medicae WSM419 transketolase YP_001328315.1 2753171 D 366394 CDS YP_001328316.1 150397849 5323520 2755196..2756206 1 NC_009636.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: sme:SMc03979 glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2756206 5323520 Smed_2651 Sinorhizobium medicae WSM419 glyceraldehyde-3-phosphate dehydrogenase YP_001328316.1 2755196 D 366394 CDS YP_001328317.1 150397850 5323521 2756212..2756802 1 NC_009636.1 PFAM: protein of unknown function DUF1089; KEGG: sme:SMc03980 hypothetical protein; hypothetical protein 2756802 5323521 Smed_2652 Sinorhizobium medicae WSM419 hypothetical protein YP_001328317.1 2756212 D 366394 CDS YP_001328318.1 150397851 5323522 2756802..2758001 1 NC_009636.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2758001 pgk 5323522 pgk Sinorhizobium medicae WSM419 phosphoglycerate kinase YP_001328318.1 2756802 D 366394 CDS YP_001328319.1 150397852 5323523 2758320..2759345 1 NC_009636.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: sme:SMc03983 probable fructose-bisphosphate aldolase class I protein; fructose-bisphosphate aldolase 2759345 5323523 Smed_2654 Sinorhizobium medicae WSM419 fructose-bisphosphate aldolase YP_001328319.1 2758320 D 366394 CDS YP_001328320.1 150397853 5323524 2759579..2760496 1 NC_009636.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: sme:SMc03984 hypothetical protein; PhzF family phenazine biosynthesis protein 2760496 5323524 Smed_2655 Sinorhizobium medicae WSM419 PhzF family phenazine biosynthesis protein YP_001328320.1 2759579 D 366394 CDS YP_001328321.1 150397854 5323525 complement(2760546..2762450) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc03985 probable adenylate/guanylate cyclase protein; adenylyl cyclase class-3/4/guanylyl cyclase 2762450 5323525 Smed_2656 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001328321.1 2760546 R 366394 CDS YP_001328322.1 150397855 5323526 complement(2762625..2762780) 1 NC_009636.1 KEGG: sme:SMc03986 hypothetical protein; hypothetical protein 2762780 5323526 Smed_2657 Sinorhizobium medicae WSM419 hypothetical protein YP_001328322.1 2762625 R 366394 CDS YP_001328323.1 150397856 5323527 2762955..2764256 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc03987 putative transport transmembrane protein; major facilitator superfamily transporter 2764256 5323527 Smed_2658 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001328323.1 2762955 D 366394 CDS YP_001328324.1 150397857 5323528 2764243..2764431 1 NC_009636.1 PFAM: protein of unknown function DUF1192; KEGG: sme:SMc03988 hypothetical protein; hypothetical protein 2764431 5323528 Smed_2659 Sinorhizobium medicae WSM419 hypothetical protein YP_001328324.1 2764243 D 366394 CDS YP_001328325.1 150397858 5323529 2764959..2765477 1 NC_009636.1 PFAM: protein of unknown function DUF1465; KEGG: sme:SMc03989 hypothetical protein; hypothetical protein 2765477 5323529 Smed_2660 Sinorhizobium medicae WSM419 hypothetical protein YP_001328325.1 2764959 D 366394 CDS YP_001328326.1 150397859 5323530 complement(2765714..2765935) 1 NC_009636.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2765935 rpmE 5323530 rpmE Sinorhizobium medicae WSM419 50S ribosomal protein L31 YP_001328326.1 2765714 R 366394 CDS YP_001328327.1 150397860 5323531 2766247..2768040 1 NC_009636.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03991 probable ABC transporter ATP-binding transmembrane protein; lipid ABC transporter ATPase/inner membrane protein 2768040 5323531 Smed_2662 Sinorhizobium medicae WSM419 lipid ABC transporter ATPase/inner membrane protein YP_001328327.1 2766247 D 366394 CDS YP_001328328.1 150397861 5323532 complement(2768043..2769071) 1 NC_009636.1 PFAM: OmpA/MotB domain protein; KEGG: sme:SMc03992 hypothetical transmembrane protein; hypothetical protein 2769071 5323532 Smed_2663 Sinorhizobium medicae WSM419 hypothetical protein YP_001328328.1 2768043 R 366394 CDS YP_001328329.1 150397862 5323533 complement(2769074..2770180) 1 NC_009636.1 KEGG: sme:SMc03993 hypothetical protein; hypothetical protein 2770180 5323533 Smed_2664 Sinorhizobium medicae WSM419 hypothetical protein YP_001328329.1 2769074 R 366394 CDS YP_001328330.1 150397863 5323534 complement(2770474..2771274) 1 NC_009636.1 PFAM: inositol monophosphatase; KEGG: sme:SMc03994 putative myo-inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 2771274 5323534 Smed_2665 Sinorhizobium medicae WSM419 inositol-phosphate phosphatase YP_001328330.1 2770474 R 366394 CDS YP_001328331.1 150397864 5323535 complement(2771514..2772659) 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sme:SMc03995 hypothetical protein; Sel1 domain-containing protein 2772659 5323535 Smed_2666 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001328331.1 2771514 R 366394 CDS YP_001328332.1 150397865 5323536 complement(2772669..2773322) 1 NC_009636.1 catalyzes the formation of thiamine monophosphate from 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate and 4-methyl-5-(2-phosphono-oxyethyl)-thiazole; thiamine-phosphate pyrophosphorylase 2773322 5323536 Smed_2667 Sinorhizobium medicae WSM419 thiamine-phosphate pyrophosphorylase YP_001328332.1 2772669 R 366394 CDS YP_001328333.1 150397866 5323537 2773423..2774205 1 NC_009636.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMc03997 hypothetical transmembrane protein; hypothetical protein 2774205 5323537 Smed_2668 Sinorhizobium medicae WSM419 hypothetical protein YP_001328333.1 2773423 D 366394 CDS YP_001328334.1 150397867 5323538 2774303..2774563 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc03998 hypothetical transcription regulator protein; regulatory protein ArsR 2774563 5323538 Smed_2669 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001328334.1 2774303 D 366394 CDS YP_001328335.1 150397868 5323539 complement(2774726..2774899) 1 NC_009636.1 PFAM: protein of unknown function DUF465; KEGG: sme:SMc03999 hypothetical protein; hypothetical protein 2774899 5323539 Smed_2670 Sinorhizobium medicae WSM419 hypothetical protein YP_001328335.1 2774726 R 366394 CDS YP_001328336.1 150397869 5323540 2775110..2775313 1 NC_009636.1 PFAM: protein of unknown function DUF465; KEGG: sme:SMc04000 hypothetical protein; hypothetical protein 2775313 5323540 Smed_2671 Sinorhizobium medicae WSM419 hypothetical protein YP_001328336.1 2775110 D 366394 CDS YP_001328337.1 150397870 5323541 2775365..2775829 1 NC_009636.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: sme:SMc04001 probable phosphoribosylaminoimidazole carboxylase catalytic subunit protein; phosphoribosylaminoimidazole carboxylase catalytic subunit 2775829 5323541 Smed_2672 Sinorhizobium medicae WSM419 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001328337.1 2775365 D 366394 CDS YP_001328338.1 150397871 5323542 2775826..2776875 1 NC_009636.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase 2776875 5323542 Smed_2673 Sinorhizobium medicae WSM419 phosphoribosylaminoimidazole carboxylase ATPase YP_001328338.1 2775826 D 366394 CDS YP_001328339.1 150397872 5323543 2777079..2777204 1 NC_009636.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 2777204 rpmJ 5323543 rpmJ Sinorhizobium medicae WSM419 50S ribosomal protein L36 YP_001328339.1 2777079 D 366394 CDS YP_001328340.1 150397873 5323544 2777296..2777907 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc04004 hypothetical signal peptide protein; hypothetical protein 2777907 5323544 Smed_2675 Sinorhizobium medicae WSM419 hypothetical protein YP_001328340.1 2777296 D 366394 CDS YP_001328341.1 150397874 5323545 complement(2778092..2779531) 1 NC_009636.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2779531 5323545 Smed_2676 Sinorhizobium medicae WSM419 pyruvate kinase YP_001328341.1 2778092 R 366394 CDS YP_001328342.1 150397875 5323546 complement(2779531..2779968) 1 NC_009636.1 PFAM: protein of unknown function DUF1036; KEGG: sme:SMc04006 hypothetical protein; hypothetical protein 2779968 5323546 Smed_2677 Sinorhizobium medicae WSM419 hypothetical protein YP_001328342.1 2779531 R 366394 CDS YP_001328343.1 150397876 5323547 2780252..2781046 1 NC_009636.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sme:SMc04007 hypothetical protein; N-formylglutamate amidohydrolase 2781046 5323547 Smed_2678 Sinorhizobium medicae WSM419 N-formylglutamate amidohydrolase YP_001328343.1 2780252 D 366394 CDS YP_001328344.1 150397877 5323548 2781066..2781371 1 NC_009636.1 PFAM: protein of unknown function DUF1244; KEGG: sme:SMc04008 hypothetical protein; hypothetical protein 2781371 5323548 Smed_2679 Sinorhizobium medicae WSM419 hypothetical protein YP_001328344.1 2781066 D 366394 CDS YP_001328345.1 150397878 5323549 2781476..2781748 1 NC_009636.1 KEGG: sme:SMc04009 hypothetical protein; hypothetical protein 2781748 5323549 Smed_2680 Sinorhizobium medicae WSM419 hypothetical protein YP_001328345.1 2781476 D 366394 CDS YP_001328346.1 150397879 5323550 complement(2782786..2782971) 1 NC_009636.1 hypothetical protein 2782971 5323550 Smed_2681 Sinorhizobium medicae WSM419 hypothetical protein YP_001328346.1 2782786 R 366394 CDS YP_001328347.1 150397880 5323551 complement(2783154..2784980) 1 NC_009636.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sme:SMc04010 hypothetical protein; hypothetical protein 2784980 5323551 Smed_2682 Sinorhizobium medicae WSM419 hypothetical protein YP_001328347.1 2783154 R 366394 CDS YP_001328348.1 150397881 5323552 complement(2785161..2786810) 1 NC_009636.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMc04011 putative sigma-54-dependent transcription regulator protein; two component sigma54 specific Fis family transcriptional regulator 2786810 5323552 Smed_2683 Sinorhizobium medicae WSM419 two component sigma54 specific Fis family transcriptional regulator YP_001328348.1 2785161 R 366394 CDS YP_001328349.1 150397882 5323553 2786895..2788778 1 NC_009636.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: sme:SMc04012 putative oligoendopeptidase F protein; pepF/M3 family oligoendopeptidase 2788778 5323553 Smed_2684 Sinorhizobium medicae WSM419 pepF/M3 family oligoendopeptidase YP_001328349.1 2786895 D 366394 CDS YP_001328350.1 150397883 5323554 2788831..2789988 1 NC_009636.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; aminodeoxychorismate synthase 2789988 5323554 Smed_2685 Sinorhizobium medicae WSM419 aminodeoxychorismate synthase YP_001328350.1 2788831 D 366394 CDS YP_001328351.1 150397884 5323555 2789985..2790611 1 NC_009636.1 KEGG: sme:SMc04014 4-amino-4-deoxychorismate lyase; hypothetical protein 2790611 5323555 Smed_2686 Sinorhizobium medicae WSM419 hypothetical protein YP_001328351.1 2789985 D 366394 CDS YP_001328352.1 150397885 5323556 complement(2790576..2791526) 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sme:SMc04015 hypothetical protein; diguanylate cyclase 2791526 5323556 Smed_2687 Sinorhizobium medicae WSM419 diguanylate cyclase YP_001328352.1 2790576 R 366394 CDS YP_001328353.1 150397886 5323557 2791932..2793383 1 NC_009636.1 PFAM: homospermidine synthase; KEGG: sme:SMc04016 probable homospermidine synthase protein; homospermidine synthase 2793383 5323557 Smed_2688 Sinorhizobium medicae WSM419 homospermidine synthase YP_001328353.1 2791932 D 366394 CDS YP_001328354.1 150397887 5323558 2793693..2794061 1 NC_009636.1 KEGG: sme:SMc04017 probable outer membrane lipoprotein; putative outer membrane lipoprotein 2794061 5323558 Smed_2689 Sinorhizobium medicae WSM419 putative outer membrane lipoprotein YP_001328354.1 2793693 D 366394 CDS YP_001328355.1 150397888 5323559 2794291..2796174 1 NC_009636.1 PFAM: Peptidoglycan-binding LysM; metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sme:SMc04018 probable 5'-nucleotidase precursor (signal peptide) protein; 5'-nucleotidase domain-containing protein 2796174 5323559 Smed_2690 Sinorhizobium medicae WSM419 5'-nucleotidase domain-containing protein YP_001328355.1 2794291 D 366394 CDS YP_001328356.1 150397889 5323560 2796292..2797329 1 NC_009636.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2797329 hemH 5323560 hemH Sinorhizobium medicae WSM419 ferrochelatase YP_001328356.1 2796292 D 366394 CDS YP_001328357.1 150397890 5323561 complement(2797393..2798409) 1 NC_009636.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: ret:RHE_PA00028 putative glycerol-3-phosphate dehydrogenase (NAD(P)+) protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 2798409 5323561 Smed_2692 Sinorhizobium medicae WSM419 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_001328357.1 2797393 R 366394 CDS YP_001328358.1 150397891 5323562 complement(2798446..2800494) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PA00027 probable oxidoreductase protein, short-chain dehydrogenase reductase family; short chain dehydrogenase 2800494 5323562 Smed_2693 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001328358.1 2798446 R 366394 CDS YP_001328359.1 150397892 5323563 complement(2800573..2801637) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00026 probable sugar ABC transporter, ATP-binding protein; ABC transporter-like protein 2801637 5323563 Smed_2694 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328359.1 2800573 R 366394 CDS YP_001328360.1 150397893 5323564 complement(2801697..2802422) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ret:RHE_PA00025 probable oxidoreductase protein, short-chain dehydrogenase-reductase family; short-chain dehydrogenase/reductase SDR 2802422 5323564 Smed_2695 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328360.1 2801697 R 366394 CDS YP_001328361.1 150397894 5323565 complement(2802494..2803990) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_3621 ABC transporter, substrate-binding protein, putative; extracellular solute-binding protein 2803990 5323565 Smed_2696 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328361.1 2802494 R 366394 CDS YP_001328362.1 150397895 5323566 complement(2804060..2804941) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3620 sugar ABC transporter permease protein, putative; binding-protein-dependent transport system inner membrane protein 2804941 5323566 Smed_2697 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328362.1 2804060 R 366394 CDS YP_001328363.1 150397896 5323567 complement(2804943..2805830) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3619 ABC transporter, permease protein, putative; binding-protein-dependent transport system inner membrane protein 2805830 5323567 Smed_2698 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328363.1 2804943 R 366394 CDS YP_001328364.1 150397897 5323568 complement(2805966..2807501) 1 NC_009636.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 2807501 glpD 5323568 glpD Sinorhizobium medicae WSM419 glycerol-3-phosphate dehydrogenase YP_001328364.1 2805966 R 366394 CDS YP_001328365.1 150397898 5323569 complement(2807498..2808310) 1 NC_009636.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; KEGG: ret:RHE_PA00023 putative hydrolase protein; HAD family hydrolase 2808310 5323569 Smed_2700 Sinorhizobium medicae WSM419 HAD family hydrolase YP_001328365.1 2807498 R 366394 CDS YP_001328366.1 150397899 5323570 complement(2808315..2809670) 1 NC_009636.1 PFAM: 3-dehydroquinate synthase; KEGG: ret:RHE_PA00022 putative glycerol 1-phosphate dehydrogenase protein (L-arabinose utilization protein) protein; 3-dehydroquinate synthase 2809670 5323570 Smed_2701 Sinorhizobium medicae WSM419 3-dehydroquinate synthase YP_001328366.1 2808315 R 366394 CDS YP_001328367.1 150397900 5323571 2809744..2810769 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_PA00021 putative transcriptional regulator protein, AsnC/GntR family; DeoR family transcriptional regulator 2810769 5323571 Smed_2702 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328367.1 2809744 D 366394 CDS YP_001328368.1 150397901 5323572 2810824..2812389 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: ret:RHE_PA00020 xylulokinase protein; carbohydrate kinase FGGY 2812389 5323572 Smed_2703 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328368.1 2810824 D 366394 CDS YP_001328369.1 150397902 5323573 2812499..2813497 1 NC_009636.1 PFAM: band 7 protein; KEGG: sme:SMc04020 hypothetical protein; hypothetical protein 2813497 5323573 Smed_2704 Sinorhizobium medicae WSM419 hypothetical protein YP_001328369.1 2812499 D 366394 CDS YP_001328370.1 150397903 5323574 2813494..2813949 1 NC_009636.1 PFAM: protein of unknown function DUF107; KEGG: sme:SMc04021 hypothetical protein; hypothetical protein 2813949 5323574 Smed_2705 Sinorhizobium medicae WSM419 hypothetical protein YP_001328370.1 2813494 D 366394 CDS YP_001328371.1 150397904 5323575 2814057..2815460 1 NC_009636.1 KEGG: sme:SMc04022 hypothetical protein; hypothetical protein 2815460 5323575 Smed_2706 Sinorhizobium medicae WSM419 hypothetical protein YP_001328371.1 2814057 D 366394 CDS YP_001328372.1 150397905 5323576 complement(2815524..2816411) 1 NC_009636.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sme:SMc04023 probable UTP--glucose-1-phosphate uridylyltransferase protein; UTP-glucose-1-phosphate uridylyltransferase 2816411 5323576 Smed_2707 Sinorhizobium medicae WSM419 UTP-glucose-1-phosphate uridylyltransferase YP_001328372.1 2815524 R 366394 CDS YP_001328373.1 150397906 5323577 2816713..2817930 1 NC_009636.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sme:SMc04024 putative membrane-bound lytic murein transglycosylase protein; lytic murein transglycosylase 2817930 5323577 Smed_2708 Sinorhizobium medicae WSM419 lytic murein transglycosylase YP_001328373.1 2816713 D 366394 CDS YP_001328374.1 150397907 5323578 2818041..2819291 1 NC_009636.1 PFAM: protein of unknown function DUF459; KEGG: sme:SMc04025 hypothetical protein; hypothetical protein 2819291 5323578 Smed_2709 Sinorhizobium medicae WSM419 hypothetical protein YP_001328374.1 2818041 D 366394 CDS YP_001328375.1 150397908 5323579 complement(2819477..2820934) 1 NC_009636.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 2820934 gltD 5323579 gltD Sinorhizobium medicae WSM419 glutamate synthase subunit beta YP_001328375.1 2819477 R 366394 CDS YP_001328376.1 150397909 5323580 complement(2821036..2825760) 1 NC_009636.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sme:SMc04028 probable glutamate synthase NADPH large chain protein; glutamate synthase 2825760 5323580 Smed_2711 Sinorhizobium medicae WSM419 glutamate synthase YP_001328376.1 2821036 R 366394 CDS YP_001328377.1 150397910 5323581 2826338..2827384 1 NC_009636.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sme:SMc04029 putative low specificity L-threonine aldolase protein; threonine aldolase 2827384 5323581 Smed_2712 Sinorhizobium medicae WSM419 threonine aldolase YP_001328377.1 2826338 D 366394 CDS YP_001328378.1 150397911 5323582 complement(2827417..2828262) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL4087 putative LysR family transcriptional regulator; LysR family transcriptional regulator 2828262 5323582 Smed_2713 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328378.1 2827417 R 366394 CDS YP_001328379.1 150397912 5323583 2828354..2829349 1 NC_009636.1 PFAM: Bile acid:sodium symporter; KEGG: sme:SMc04030 hypothetical protein; bile acid:sodium symporter 2829349 5323583 Smed_2714 Sinorhizobium medicae WSM419 bile acid:sodium symporter YP_001328379.1 2828354 D 366394 CDS YP_001328380.1 150397913 5323584 complement(2829411..2829872) 1 NC_009636.1 PFAM: heat shock protein Hsp20; KEGG: sme:SMc04040 probable heat shock protein; heat shock protein Hsp20 2829872 5323584 Smed_2715 Sinorhizobium medicae WSM419 heat shock protein Hsp20 YP_001328380.1 2829411 R 366394 CDS YP_001328381.1 150397914 5323585 2830247..2831260 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc04041 probable lysophospholipase L2 protein; alpha/beta hydrolase fold protein 2831260 5323585 Smed_2716 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001328381.1 2830247 D 366394 CDS YP_001328382.1 150397915 5323586 complement(2831287..2832153) 1 NC_009636.1 TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: sme:SMc04042 putative monophosphatase protein; histidinol-phosphate phosphatase 2832153 5323586 Smed_2717 Sinorhizobium medicae WSM419 histidinol-phosphate phosphatase YP_001328382.1 2831287 R 366394 CDS YP_001328383.1 150397916 5323587 complement(2832368..2833249) 1 NC_009636.1 PFAM: N-formylglutamate amidohydrolase; KEGG: sme:SMc04043 hypothetical protein; N-formylglutamate amidohydrolase 2833249 5323587 Smed_2718 Sinorhizobium medicae WSM419 N-formylglutamate amidohydrolase YP_001328383.1 2832368 R 366394 CDS YP_001328384.1 150397917 5323588 2833438..2833800 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc04044 putative 2-component receiver domain protein; response regulator receiver protein 2833800 5323588 Smed_2719 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001328384.1 2833438 D 366394 CDS YP_001328385.1 150397918 5323590 complement(2834218..2834457) 1 NC_009636.1 PFAM: HicB family protein; KEGG: sme:SMa1990 hypothetical protein; HicB family protein 2834457 5323590 Smed_2720 Sinorhizobium medicae WSM419 HicB family protein YP_001328385.1 2834218 R 366394 CDS YP_001328386.1 150397919 5323591 2835011..2835397 1 NC_009636.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: pcu:pc0710 hypothetical protein; Sel1 domain-containing protein 2835397 5323591 Smed_2721 Sinorhizobium medicae WSM419 Sel1 domain-containing protein YP_001328386.1 2835011 D 366394 CDS YP_001328387.1 150397920 5323592 2835699..2835863 1 NC_009636.1 hypothetical protein 2835863 5323592 Smed_2722 Sinorhizobium medicae WSM419 hypothetical protein YP_001328387.1 2835699 D 366394 CDS YP_001328388.1 150397921 5323593 2835974..2837812 1 NC_009636.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2837812 5323593 Smed_2723 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001328388.1 2835974 D 366394 CDS YP_001328389.1 150397922 5323594 complement(2837880..2838284) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc04046 hypothetical protein; glutathione-dependent formaldehyde-activating protein 2838284 5323594 Smed_2724 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001328389.1 2837880 R 366394 CDS YP_001328390.1 150397923 5323595 2838386..2838853 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: rle:RL0596 putative MarR family transcriptional regulator; MarR family transcriptional regulator 2838853 5323595 Smed_2725 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001328390.1 2838386 D 366394 CDS YP_001328391.1 150397924 5323596 complement(2839003..2839446) 1 NC_009636.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: sme:SMc04047 probable pseudoazurin (blue copper protein); pseudoazurin 2839446 5323596 Smed_2726 Sinorhizobium medicae WSM419 pseudoazurin YP_001328391.1 2839003 R 366394 CDS YP_001328392.1 150397925 5323597 complement(2839490..2839831) 1 NC_009636.1 KEGG: sme:SMc04048 putative cytochrome c protein; putative cytochrome c protein 2839831 5323597 Smed_2727 Sinorhizobium medicae WSM419 putative cytochrome c protein YP_001328392.1 2839490 R 366394 CDS YP_001328393.1 150397926 5323598 complement(2839910..2841139) 1 NC_009636.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: sme:SMc04049 putative sulfite oxidase protein; molybdopterin binding oxidoreductase 2841139 5323598 Smed_2728 Sinorhizobium medicae WSM419 molybdopterin binding oxidoreductase YP_001328393.1 2839910 R 366394 CDS YP_001328394.1 150397927 5323599 complement(2841299..2842060) 1 NC_009636.1 KEGG: sme:SMc04050 hypothetical protein; putative transmembrane anti-sigma factor 2842060 5323599 Smed_2729 Sinorhizobium medicae WSM419 putative transmembrane anti-sigma factor YP_001328394.1 2841299 R 366394 CDS YP_001328395.1 150397928 5323600 complement(2842057..2842581) 1 NC_009636.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc04051 putative RNA polymerase sigma-E factor (sigma-24) protein; ECF subfamily RNA polymerase sigma-24 factor 2842581 5323600 Smed_2730 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001328395.1 2842057 R 366394 CDS YP_001328396.1 150397929 5323601 complement(2842761..2843207) 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc04052 putative transcription regulator protein; MarR family transcriptional regulator 2843207 5323601 Smed_2731 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001328396.1 2842761 R 366394 CDS YP_001328397.1 150397930 5323602 2843353..2843826 1 NC_009636.1 PFAM: protein of unknown function DUF1579; KEGG: sme:SMc04053 hypothetical protein; hypothetical protein 2843826 5323602 Smed_2732 Sinorhizobium medicae WSM419 hypothetical protein YP_001328397.1 2843353 D 366394 CDS YP_001328398.1 150397931 5323603 2844055..2844816 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc04054 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2844816 5323603 Smed_2733 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001328398.1 2844055 D 366394 CDS YP_001328399.1 150397932 5323604 complement(2844864..2845775) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04055 putative transcription regulator protein; LysR family transcriptional regulator 2845775 5323604 Smed_2734 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328399.1 2844864 R 366394 CDS YP_001328400.1 150397933 5323605 2845880..2846914 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc04056 putative oxidoreductase protein; aldo/keto reductase 2846914 5323605 Smed_2735 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001328400.1 2845880 D 366394 CDS YP_001328401.1 150397934 5323606 2847135..2849543 1 NC_009636.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: sme:SMc04057 hypothetical protein; hypothetical protein 2849543 5323606 Smed_2736 Sinorhizobium medicae WSM419 hypothetical protein YP_001328401.1 2847135 D 366394 CDS YP_001328402.1 150397935 5323607 2849558..2850436 1 NC_009636.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: sme:SMc04058 hypothetical protein; transglutaminase domain-containing protein 2850436 5323607 Smed_2737 Sinorhizobium medicae WSM419 transglutaminase domain-containing protein YP_001328402.1 2849558 D 366394 CDS YP_001328403.1 150397936 5323608 2850614..2851873 1 NC_009636.1 SMART: von Willebrand factor type A; KEGG: sme:SMc04059 hypothetical protein; von Willebrand factor type A 2851873 5323608 Smed_2738 Sinorhizobium medicae WSM419 von Willebrand factor type A YP_001328403.1 2850614 D 366394 CDS YP_001328404.1 150397937 5323609 2852081..2854546 1 NC_009636.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: sme:SMc04460 probable glycogen phosphorylase protein; glycogen/starch/alpha-glucan phosphorylase 2854546 5323609 Smed_2739 Sinorhizobium medicae WSM419 glycogen/starch/alpha-glucan phosphorylase YP_001328404.1 2852081 D 366394 CDS YP_001328405.1 150397938 5323610 2854543..2856753 1 NC_009636.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 2856753 5323610 Smed_2740 Sinorhizobium medicae WSM419 glycogen branching protein YP_001328405.1 2854543 D 366394 CDS YP_001328406.1 150397939 5323611 2856865..2858124 1 NC_009636.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 2858124 glgC 5323611 glgC Sinorhizobium medicae WSM419 glucose-1-phosphate adenylyltransferase YP_001328406.1 2856865 D 366394 CDS YP_001328407.1 150397940 5323612 2858131..2859573 1 NC_009636.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 2859573 glgA 5323612 glgA Sinorhizobium medicae WSM419 glycogen synthase YP_001328407.1 2858131 D 366394 CDS YP_001328408.1 150397941 5323613 2859579..2861207 1 NC_009636.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2861207 5323613 Smed_2743 Sinorhizobium medicae WSM419 phosphoglucomutase YP_001328408.1 2859579 D 366394 CDS YP_001328409.1 150397942 5323614 2861322..2863286 1 NC_009636.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sme:SMc03926 probable glycosyl hydrolase protein; glycogen debranching protein GlgX 2863286 5323614 Smed_2744 Sinorhizobium medicae WSM419 glycogen debranching protein GlgX YP_001328409.1 2861322 D 366394 CDS YP_001328410.1 150397943 5323615 2863361..2863849 1 NC_009636.1 PFAM: MaoC domain protein dehydratase; KEGG: sme:SMc03927 putative nodulation protein; dehydratase 2863849 5323615 Smed_2745 Sinorhizobium medicae WSM419 dehydratase YP_001328410.1 2863361 D 366394 CDS YP_001328411.1 150397944 5323616 2863842..2864909 1 NC_009636.1 KEGG: sme:SMc03928 hypothetical protein; hypothetical protein 2864909 5323616 Smed_2746 Sinorhizobium medicae WSM419 hypothetical protein YP_001328411.1 2863842 D 366394 CDS YP_001328412.1 150397945 5323617 complement(2864933..2866144) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein; alcohol dehydrogenase 2866144 5323617 Smed_2747 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328412.1 2864933 R 366394 CDS YP_001328413.1 150397946 5323618 2866281..2866952 1 NC_009636.1 KEGG: sfu:Sfum_2194 hypothetical protein; hypothetical protein 2866952 5323618 Smed_2748 Sinorhizobium medicae WSM419 hypothetical protein YP_001328413.1 2866281 D 366394 CDS YP_001328414.1 150397947 5323619 complement(2867095..2867649) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, gamma subunit family; PFAM: Sarcosine oxidase gamma subunit; KEGG: sme:SMc03930 putative sarcosine oxidase gamma subunit protein; sarcosine oxidase subunit gamma 2867649 5323619 Smed_2749 Sinorhizobium medicae WSM419 sarcosine oxidase subunit gamma YP_001328414.1 2867095 R 366394 CDS YP_001328415.1 150397948 5323620 complement(2867642..2870635) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: sme:SMc03931 putative sarcosine oxidase alpha subunit transmembrane protein; sarcosine oxidase subunit alpha 2870635 5323620 Smed_2750 Sinorhizobium medicae WSM419 sarcosine oxidase subunit alpha YP_001328415.1 2867642 R 366394 CDS YP_001328416.1 150397949 5323621 complement(2870632..2870973) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: sme:SMc03932 putative sarcosine oxidase delta subunit protein; sarcosine oxidase subunit delta 2870973 5323621 Smed_2751 Sinorhizobium medicae WSM419 sarcosine oxidase subunit delta YP_001328416.1 2870632 R 366394 CDS YP_001328417.1 150397950 5323622 complement(2871093..2872346) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03933 putative sarcosine oxidase subunit B protein; sarcosine oxidase subunit beta 2872346 5323622 Smed_2752 Sinorhizobium medicae WSM419 sarcosine oxidase subunit beta YP_001328417.1 2871093 R 366394 CDS YP_001328418.1 150397951 5323623 2872653..2872868 1 NC_009636.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2872868 rpsU 5323623 rpsU Sinorhizobium medicae WSM419 30S ribosomal protein S21 YP_001328418.1 2872653 D 366394 CDS YP_001328419.1 150397952 5323624 2873062..2873949 1 NC_009636.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sme:SMc03935 hypothetical protein; hypothetical protein 2873949 5323624 Smed_2754 Sinorhizobium medicae WSM419 hypothetical protein YP_001328419.1 2873062 D 366394 CDS YP_001328420.1 150397953 5323625 2874085..2874558 1 NC_009636.1 PFAM: protein of unknown function DUF992; KEGG: sme:SMc03936 conserved hypothetical signal peptide protein; hypothetical protein 2874558 5323625 Smed_2755 Sinorhizobium medicae WSM419 hypothetical protein YP_001328420.1 2874085 D 366394 CDS YP_001328421.1 150397954 5323626 2874835..2876055 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc03937 putative adenylate/guanylate cyclase protein; putative adenylate/guanylate cyclase 2876055 5323626 Smed_2756 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001328421.1 2874835 D 366394 CDS YP_001328422.1 150397955 5323627 complement(2876187..2877590) 1 NC_009636.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: sme:SMc03938 probable NAD(P) transhydrogenase subunit beta transmembrane protein; NAD(P)(+) transhydrogenase 2877590 5323627 Smed_2757 Sinorhizobium medicae WSM419 NAD(P)(+) transhydrogenase YP_001328422.1 2876187 R 366394 CDS YP_001328423.1 150397956 5323628 complement(2877600..2878010) 1 NC_009636.1 KEGG: sme:SMc03939 probable NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein; putative NAD(P) transhydrogenase subunit alpha 2878010 5323628 Smed_2758 Sinorhizobium medicae WSM419 putative NAD(P) transhydrogenase subunit alpha YP_001328423.1 2877600 R 366394 CDS YP_001328424.1 150397957 5323629 complement(2878011..2879159) 1 NC_009636.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: sme:SMc03950 probable proton-translocating nicotinamide nucleotide transhydrogenase subunit protein; NAD(P) transhydrogenase subunit alpha 2879159 5323629 Smed_2759 Sinorhizobium medicae WSM419 NAD(P) transhydrogenase subunit alpha YP_001328424.1 2878011 R 366394 CDS YP_001328425.1 150397958 5323630 complement(2879471..2879695) 1 NC_009636.1 PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: sme:SMc03941 hypothetical protein; aa3 type cytochrome c oxidase subunit IV 2879695 5323630 Smed_2760 Sinorhizobium medicae WSM419 aa3 type cytochrome c oxidase subunit IV YP_001328425.1 2879471 R 366394 CDS YP_001328426.1 150397959 5323631 complement(2879906..2882272) 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; KEGG: sme:SMc03942 hypothetical protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2882272 5323631 Smed_2761 Sinorhizobium medicae WSM419 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001328426.1 2879906 R 366394 CDS YP_001328427.1 150397960 5323632 2882653..2883408 1 NC_009636.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: sme:SMc03943 hypothetical protein; peptidase C26 2883408 5323632 Smed_2762 Sinorhizobium medicae WSM419 peptidase C26 YP_001328427.1 2882653 D 366394 CDS YP_001328428.1 150397961 5323633 complement(2883405..2884370) 1 NC_009636.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc04462 glycerate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 2884370 5323633 Smed_2763 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001328428.1 2883405 R 366394 CDS YP_001328429.1 150397962 5323634 complement(2884444..2885466) 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SMc02975 putative phosphoenolpyruvate carboxykinase regulator transcription regulator protein; alanine racemase 2885466 5323634 Smed_2764 Sinorhizobium medicae WSM419 alanine racemase YP_001328429.1 2884444 R 366394 CDS YP_001328430.1 150397963 5323635 complement(2885558..2886061) 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc02976 putative transcription regulator protein; MarR family transcriptional regulator 2886061 5323635 Smed_2765 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001328430.1 2885558 R 366394 CDS YP_001328431.1 150397964 5323636 2886175..2886966 1 NC_009636.1 PFAM: Creatininase; KEGG: sme:SMc02977 putative creatinine amidohydrolase; creatininase 2886966 5323636 Smed_2766 Sinorhizobium medicae WSM419 creatininase YP_001328431.1 2886175 D 366394 CDS YP_001328432.1 150397965 5323637 2887097..2888206 1 NC_009636.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sme:SMc02978 hypothetical protein; cobalamin synthesis protein P47K 2888206 5323637 Smed_2767 Sinorhizobium medicae WSM419 cobalamin synthesis protein P47K YP_001328432.1 2887097 D 366394 CDS YP_001328433.1 150397966 5323638 2888271..2889260 1 NC_009636.1 SMART: WD-40 repeat protein; KEGG: sme:SMc02979 hypothetical protein; WD-40 repeat-containing protein 2889260 5323638 Smed_2768 Sinorhizobium medicae WSM419 WD-40 repeat-containing protein YP_001328433.1 2888271 D 366394 CDS YP_001328434.1 150397967 5323639 complement(2889341..2889787) 1 NC_009636.1 KEGG: sme:SMc02980 hypothetical protein; hypothetical protein 2889787 5323639 Smed_2769 Sinorhizobium medicae WSM419 hypothetical protein YP_001328434.1 2889341 R 366394 CDS YP_001328435.1 150397968 5323640 2889978..2890679 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc02981 putative amino acid efflux transmembrane protein; lysine exporter protein LysE/YggA 2890679 5323640 Smed_2770 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001328435.1 2889978 D 366394 CDS YP_001328436.1 150397969 5323641 complement(2890698..2891288) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc02982 hypothetical protein; N-acetyltransferase GCN5 2891288 5323641 Smed_2771 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328436.1 2890698 R 366394 CDS YP_001328437.1 150397970 5323642 complement(2891376..2892509) 1 NC_009636.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sme:SMc02983 putative ornithine, dap, or arginine decarboxylase protein; Orn/DAP/Arg decarboxylase 2 2892509 5323642 Smed_2772 Sinorhizobium medicae WSM419 Orn/DAP/Arg decarboxylase 2 YP_001328437.1 2891376 R 366394 CDS YP_001328438.1 150397971 5323643 2893045..2893959 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02984 putative transcription regulator protein; LysR family transcriptional regulator 2893959 5323643 Smed_2773 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328438.1 2893045 D 366394 CDS YP_001328439.1 150397972 5323644 2894081..2894725 1 NC_009636.1 PFAM: protein of unknown function DUF1007; KEGG: sme:SMc02985 hypothetical protein; hypothetical protein 2894725 5323644 Smed_2774 Sinorhizobium medicae WSM419 hypothetical protein YP_001328439.1 2894081 D 366394 CDS YP_001328440.1 150397973 5323645 2894719..2895732 1 NC_009636.1 PFAM: high-affinity nickel-transporter; KEGG: sme:SMc02986 hypothetical protein; high-affinity nickel-transporter 2895732 5323645 Smed_2775 Sinorhizobium medicae WSM419 high-affinity nickel-transporter YP_001328440.1 2894719 D 366394 CDS YP_001328441.1 150397974 5323646 complement(2895844..2896056) 1 NC_009636.1 KEGG: sme:SMc02989 hypothetical protein; hypothetical protein 2896056 5323646 Smed_2776 Sinorhizobium medicae WSM419 hypothetical protein YP_001328441.1 2895844 R 366394 CDS YP_001328442.1 150397975 5323647 complement(2896053..2896751) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc03151 hypothetical protein; N-acetyltransferase GCN5 2896751 5323647 Smed_2777 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328442.1 2896053 R 366394 CDS YP_001328443.1 150397976 5323648 complement(2896867..2897571) 1 NC_009636.1 PFAM: protein of unknown function DUF533; KEGG: sme:SMc03152 hypothetical protein; hypothetical protein 2897571 5323648 Smed_2778 Sinorhizobium medicae WSM419 hypothetical protein YP_001328443.1 2896867 R 366394 CDS YP_001328444.1 150397977 5323649 complement(2897734..2898372) 1 NC_009636.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2898372 5323649 Smed_2779 Sinorhizobium medicae WSM419 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001328444.1 2897734 R 366394 CDS YP_001328445.1 150397978 5323650 2898599..2899072 1 NC_009636.1 PFAM: adenylate cyclase; KEGG: sme:SMc03154 hypothetical protein; adenylate cyclase 2899072 5323650 Smed_2780 Sinorhizobium medicae WSM419 adenylate cyclase YP_001328445.1 2898599 D 366394 CDS YP_001328446.1 150397979 5323651 2899069..2899971 1 NC_009636.1 PFAM: CHAD domain containing protein; KEGG: sme:SMc03155 hypothetical protein; CHAD domain-containing protein 2899971 5323651 Smed_2781 Sinorhizobium medicae WSM419 CHAD domain-containing protein YP_001328446.1 2899069 D 366394 CDS YP_001328447.1 150397980 5323652 2900053..2901000 1 NC_009636.1 PFAM: Rhodanese domain protein; KEGG: sme:SMc03156 conserved hypothetical protein; rhodanese domain-containing protein 2901000 5323652 Smed_2782 Sinorhizobium medicae WSM419 rhodanese domain-containing protein YP_001328447.1 2900053 D 366394 CDS YP_001328448.1 150397981 5323653 complement(2901116..2901892) 1 NC_009636.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: sme:SMc03157 putative outer membrane lipoprotein transmembrane; YaeC family lipoprotein 2901892 5323653 Smed_2783 Sinorhizobium medicae WSM419 YaeC family lipoprotein YP_001328448.1 2901116 R 366394 CDS YP_001328449.1 150397982 5323654 complement(2901931..2902596) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03158 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2902596 5323654 Smed_2784 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328449.1 2901931 R 366394 CDS YP_001328450.1 150397983 5323655 complement(2902586..2903665) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03159 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2903665 5323655 Smed_2785 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328450.1 2902586 R 366394 CDS YP_001328451.1 150397984 5323656 complement(2903962..2905368) 1 NC_009636.1 PFAM: glycoside hydrolase family 1; KEGG: sme:SMc03160 probable beta-glucosidase protein; beta-glucosidase 2905368 5323656 Smed_2786 Sinorhizobium medicae WSM419 beta-glucosidase YP_001328451.1 2903962 R 366394 CDS YP_001328452.1 150397985 5323657 complement(2905673..2906857) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc03161 putative oxidoreductase protein; oxidoreductase domain-containing protein 2906857 5323657 Smed_2787 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328452.1 2905673 R 366394 CDS YP_001328453.1 150397986 5323658 complement(2907028..2908080) 1 NC_009636.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc03162 hypothetical protein; xylose isomerase domain-containing protein 2908080 5323658 Smed_2788 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001328453.1 2907028 R 366394 CDS YP_001328454.1 150397987 5323659 complement(2908274..2909584) 1 NC_009636.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 2909584 5323659 Smed_2789 Sinorhizobium medicae WSM419 xylose isomerase YP_001328454.1 2908274 R 366394 CDS YP_001328455.1 150397988 5323660 2909717..2910073 1 NC_009636.1 KEGG: mlo:mll5035 hypothetical protein; hypothetical protein 2910073 5323660 Smed_2790 Sinorhizobium medicae WSM419 hypothetical protein YP_001328455.1 2909717 D 366394 CDS YP_001328456.1 150397989 5323661 complement(2910112..2911566) 1 NC_009636.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: sme:SMc03164 putative xylulose kinase protein; xylulokinase 2911566 5323661 Smed_2791 Sinorhizobium medicae WSM419 xylulokinase YP_001328456.1 2910112 R 366394 CDS YP_001328457.1 150397990 5323662 complement(2911576..2912613) 1 NC_009636.1 PFAM: regulatory protein LacI; KEGG: sme:SMc03165 putative transcription regulator protein; regulatory protein LacI 2912613 5323662 Smed_2792 Sinorhizobium medicae WSM419 regulatory protein LacI YP_001328457.1 2911576 R 366394 CDS YP_001328458.1 150397991 5323663 2913150..2914526 1 NC_009636.1 PFAM: peptidase S41; KEGG: ctc:CTC01801 hypothetical protein; peptidase S41 2914526 5323663 Smed_2793 Sinorhizobium medicae WSM419 peptidase S41 YP_001328458.1 2913150 D 366394 CDS YP_001328459.1 150397992 5323664 complement(2914672..2916261) 1 NC_009636.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc03167 putative multidrug efflux system protein; EmrB/QacA family drug resistance transporter 2916261 5323664 Smed_2794 Sinorhizobium medicae WSM419 EmrB/QacA family drug resistance transporter YP_001328459.1 2914672 R 366394 CDS YP_001328460.1 150397993 5323665 complement(2916292..2917500) 1 NC_009636.1 PFAM: secretion protein HlyD family protein; KEGG: sme:SMc03168 putative multidrug efflux system protein; secretion protein HlyD family protein 2917500 5323665 Smed_2795 Sinorhizobium medicae WSM419 secretion protein HlyD family protein YP_001328460.1 2916292 R 366394 CDS YP_001328461.1 150397994 5323666 2917751..2918446 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc03169 putative transcription regulator protein; TetR family transcriptional regulator 2918446 5323666 Smed_2796 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001328461.1 2917751 D 366394 CDS YP_001328462.1 150397995 5323667 2918560..2919399 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: sme:SMc03170 putative transcription regulator protein; transcription activator effector binding 2919399 5323667 Smed_2797 Sinorhizobium medicae WSM419 transcription activator effector binding YP_001328462.1 2918560 D 366394 CDS YP_001328463.1 150397996 5323668 2919565..2920320 1 NC_009636.1 PFAM: Integral membrane protein TerC; KEGG: sme:SMc03171 hypothetical protein; integral membrane protein TerC 2920320 5323668 Smed_2798 Sinorhizobium medicae WSM419 integral membrane protein TerC YP_001328463.1 2919565 D 366394 CDS YP_001328464.1 150397997 5323669 2920720..2922177 1 NC_009636.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2922177 gltX 5323669 gltX Sinorhizobium medicae WSM419 glutamyl-tRNA synthetase YP_001328464.1 2920720 D 366394 CDS YP_001328465.1 150397998 5323670 2922188..2923684 1 NC_009636.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 2923684 lysS 5323670 lysS Sinorhizobium medicae WSM419 lysyl-tRNA synthetase YP_001328465.1 2922188 D 366394 CDS YP_001328466.1 150397999 5323671 complement(2923767..2924384) 1 NC_009636.1 KEGG: sme:SMc03174 hypothetical unknown transmembrane protein; hypothetical protein 2924384 5323671 Smed_2801 Sinorhizobium medicae WSM419 hypothetical protein YP_001328466.1 2923767 R 366394 CDS YP_001328467.1 150398000 5323672 2924595..2925548 1 NC_009636.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sme:SMc03175 putative nucleoside hydrolase protein; inosine/uridine-preferring nucleoside hydrolase 2925548 5323672 Smed_2802 Sinorhizobium medicae WSM419 inosine/uridine-preferring nucleoside hydrolase YP_001328467.1 2924595 D 366394 CDS YP_001328468.1 150398001 5323673 2925710..2926726 1 NC_009636.1 KEGG: sme:SMc03176 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 2926726 5323673 Smed_2803 Sinorhizobium medicae WSM419 putative mRNA 3-end processing factor YP_001328468.1 2925710 D 366394 CDS YP_001328469.1 150398002 5323674 2926730..2928343 1 NC_009636.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 2928343 5323674 Smed_2804 Sinorhizobium medicae WSM419 ATP-dependent DNA ligase YP_001328469.1 2926730 D 366394 CDS YP_001328470.1 150398003 5323675 2928501..2931137 1 NC_009636.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; PAS fold-3 domain protein; KEGG: sme:SMc03178 hypothetical protein; PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase 2931137 5323675 Smed_2805 Sinorhizobium medicae WSM419 PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase YP_001328470.1 2928501 D 366394 CDS YP_001328471.1 150398004 5323676 2931286..2934279 1 NC_009636.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 2934279 5323676 Smed_2806 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit A YP_001328471.1 2931286 D 366394 CDS YP_001328472.1 150398005 5323677 2934281..2934628 1 NC_009636.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 2934628 5323677 Smed_2807 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit C YP_001328472.1 2934281 D 366394 CDS YP_001328473.1 150398006 5323678 2934621..2936240 1 NC_009636.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 2936240 5323678 Smed_2808 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit D YP_001328473.1 2934621 D 366394 CDS YP_001328474.1 150398007 5323679 2936243..2936728 1 NC_009636.1 PFAM: cation antiporter; KEGG: sme:SMc03182 multicomponent K+:H+ antiporter subunit E; cation antiporter 2936728 5323679 Smed_2809 Sinorhizobium medicae WSM419 cation antiporter YP_001328474.1 2936243 D 366394 CDS YP_001328475.1 150398008 5323680 2936725..2937006 1 NC_009636.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 2937006 5323680 Smed_2810 Sinorhizobium medicae WSM419 putative monovalent cation/H+ antiporter subunit F YP_001328475.1 2936725 D 366394 CDS YP_001328476.1 150398009 5323681 2937003..2937374 1 NC_009636.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+ antiporter subunit; KEGG: sme:SMc03184 PH adaptation potassium efflux system G transmembrane protein; monovalent cation/proton antiporter subunit MnhG/PhaG 2937374 5323681 Smed_2811 Sinorhizobium medicae WSM419 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001328476.1 2937003 D 366394 CDS YP_001328477.1 150398010 5323682 complement(2937405..2938205) 1 NC_009636.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMc03187 probable precorrin-4 C11-methyltransferase protein; precorrin-4 C(11)-methyltransferase 2938205 5323682 Smed_2812 Sinorhizobium medicae WSM419 precorrin-4 C(11)-methyltransferase YP_001328477.1 2937405 R 366394 CDS YP_001328478.1 150398011 5323683 complement(2938202..2939443) 1 NC_009636.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMc03188 probable precorrin-6Y C5,15-methyltransferase (decarboxylating) protein; precorrin-6y C5,15-methyltransferase subunit CbiE 2939443 5323683 Smed_2813 Sinorhizobium medicae WSM419 precorrin-6y C5,15-methyltransferase subunit CbiE YP_001328478.1 2938202 R 366394 CDS YP_001328479.1 150398012 5323684 2939412..2940212 1 NC_009636.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2940212 5323684 Smed_2814 Sinorhizobium medicae WSM419 cobalt-precorrin-6x reductase YP_001328479.1 2939412 D 366394 CDS YP_001328480.1 150398013 5323685 complement(2940176..2940940) 1 NC_009636.1 catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; precorrin-3B C(17)-methyltransferase 2940940 5323685 Smed_2815 Sinorhizobium medicae WSM419 precorrin-3B C(17)-methyltransferase YP_001328480.1 2940176 R 366394 CDS YP_001328481.1 150398014 5323686 complement(2940937..2941710) 1 NC_009636.1 catalyzes the formation of precorrin-3 from precorrin-2; precorrin-2 C(20)-methyltransferase 2941710 5323686 Smed_2816 Sinorhizobium medicae WSM419 precorrin-2 C(20)-methyltransferase YP_001328481.1 2940937 R 366394 CDS YP_001328482.1 150398015 5323687 complement(2941707..2942339) 1 NC_009636.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2942339 cobH 5323687 cobH Sinorhizobium medicae WSM419 precorrin-8X methylmutase YP_001328482.1 2941707 R 366394 CDS YP_001328483.1 150398016 5323688 complement(2942342..2943673) 1 NC_009636.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: sme:SMc03193 probable cobalamin biosynthesis protein; precorrin-3B synthase 2943673 5323688 Smed_2818 Sinorhizobium medicae WSM419 precorrin-3B synthase YP_001328483.1 2942342 R 366394 CDS YP_001328484.1 150398017 5323689 complement(2943849..2944619) 1 NC_009636.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 2944619 5323689 Smed_2819 Sinorhizobium medicae WSM419 precorrin 6A synthase YP_001328484.1 2943849 R 366394 CDS YP_001328485.1 150398018 5323690 complement(2944719..2945444) 1 NC_009636.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 2945444 5323690 Smed_2820 Sinorhizobium medicae WSM419 uracil-DNA glycosylase YP_001328485.1 2944719 R 366394 CDS YP_001328486.1 150398019 5323691 2945643..2946428 1 NC_009636.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc03196 putative molybdate-binding periplasmic ABC transporter protein; molybdenum ABC transporter periplasmic molybdate-binding protein 2946428 5323691 Smed_2821 Sinorhizobium medicae WSM419 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001328486.1 2945643 D 366394 CDS YP_001328487.1 150398020 5323692 2946480..2947181 1 NC_009636.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 2947181 modB 5323692 modB Sinorhizobium medicae WSM419 molybdate ABC transporter permease YP_001328487.1 2946480 D 366394 CDS YP_001328488.1 150398021 5323693 2947178..2948251 1 NC_009636.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: sme:SMc03198 putative molybdenum transport ATP-binding ABC transporter protein; molybdate ABC transporter ATPase 2948251 5323693 Smed_2823 Sinorhizobium medicae WSM419 molybdate ABC transporter ATPase YP_001328488.1 2947178 D 366394 CDS YP_001328489.1 150398022 5323694 complement(2948284..2948742) 1 NC_009636.1 PFAM: regulatory protein LysR; KEGG: sme:SMc03199 putative molybdenum transport associated protein; ModE family transcriptional regulator 2948742 5323694 Smed_2824 Sinorhizobium medicae WSM419 ModE family transcriptional regulator YP_001328489.1 2948284 R 366394 CDS YP_001328490.1 150398023 5323695 2948831..2950162 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03200 putative amino acid deaminase transmembrane protein; FAD dependent oxidoreductase 2950162 5323695 Smed_2825 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001328490.1 2948831 D 366394 CDS YP_001328491.1 150398024 5323696 2950501..2951733 1 NC_009636.1 PFAM: dehydrogenase E1 component; KEGG: sme:SMc03201 probable 2-oxoisovalerate dehydrogenase alpha subunit protein; 3-methyl-2-oxobutanoate dehydrogenase 2951733 5323696 Smed_2826 Sinorhizobium medicae WSM419 3-methyl-2-oxobutanoate dehydrogenase YP_001328491.1 2950501 D 366394 CDS YP_001328492.1 150398025 5323697 2951735..2952748 1 NC_009636.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: sme:SMc03202 probable 2-oxoisovalerate dehydrogenase beta subunit protein; transketolase central region 2952748 5323697 Smed_2827 Sinorhizobium medicae WSM419 transketolase central region YP_001328492.1 2951735 D 366394 CDS YP_001328493.1 150398026 5323698 2952752..2954032 1 NC_009636.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sme:SMc03203 probable lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex protein; branched-chain alpha-keto acid dehydrogenase subunit E2 2954032 5323698 Smed_2828 Sinorhizobium medicae WSM419 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001328493.1 2952752 D 366394 CDS YP_001328494.1 150398027 5323699 2954038..2955432 1 NC_009636.1 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2955432 5323699 Smed_2829 Sinorhizobium medicae WSM419 dihydrolipoamide dehydrogenase YP_001328494.1 2954038 D 366394 CDS YP_001328495.1 150398028 5323700 complement(2955462..2956346) 1 NC_009636.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2956346 5323700 Smed_2830 Sinorhizobium medicae WSM419 formyltetrahydrofolate deformylase YP_001328495.1 2955462 R 366394 CDS YP_001328496.1 150398029 5323701 complement(2956507..2957148) 1 NC_009636.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: sme:SMc03206 maleylacetoacetate isomerase (glutathione transferase ZETA 1) protein; maleylacetoacetate isomerase 2957148 5323701 Smed_2831 Sinorhizobium medicae WSM419 maleylacetoacetate isomerase YP_001328496.1 2956507 R 366394 CDS YP_001328497.1 150398030 5323702 complement(2957165..2958181) 1 NC_009636.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sme:SMc03207 putative aromatic amino acid degradation protein; fumarylacetoacetate (FAA) hydrolase 2958181 5323702 Smed_2832 Sinorhizobium medicae WSM419 fumarylacetoacetate (FAA) hydrolase YP_001328497.1 2957165 R 366394 CDS YP_001328498.1 150398031 5323703 complement(2958275..2959636) 1 NC_009636.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 2959636 5323703 Smed_2833 Sinorhizobium medicae WSM419 homogentisate 1,2-dioxygenase YP_001328498.1 2958275 R 366394 CDS YP_001328499.1 150398032 5323704 2959713..2960171 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc03209 putative transcription regulator protein; MarR family transcriptional regulator 2960171 5323704 Smed_2834 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001328499.1 2959713 D 366394 CDS YP_001328500.1 150398033 5323705 complement(2960158..2960676) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc03210 putative transcription regulator protein; AsnC family transcriptional regulator 2960676 5323705 Smed_2835 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001328500.1 2960158 R 366394 CDS YP_001328501.1 150398034 5323706 2960806..2961918 1 NC_009636.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc03211 putative 4-hydroxyphenylpyruvate dioxygenase protein; 4-hydroxyphenylpyruvate dioxygenase 2961918 5323706 Smed_2836 Sinorhizobium medicae WSM419 4-hydroxyphenylpyruvate dioxygenase YP_001328501.1 2960806 D 366394 CDS YP_001328502.1 150398035 5323707 complement(2961997..2962785) 1 NC_009636.1 PFAM: regulatory protein LuxR; KEGG: sme:SMc03150 putative transcription regulator protein; response regulator receiver protein 2962785 5323707 Smed_2837 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001328502.1 2961997 R 366394 CDS YP_001328503.1 150398036 5323708 2963705..2964226 1 NC_009636.1 KEGG: sme:SMc03149 hypothetical protein; hypothetical protein 2964226 5323708 Smed_2838 Sinorhizobium medicae WSM419 hypothetical protein YP_001328503.1 2963705 D 366394 CDS YP_001328504.1 150398037 5323709 2964420..2964914 1 NC_009636.1 KEGG: sme:SMc03145 hypothetical unknown protein; hypothetical protein 2964914 5323709 Smed_2839 Sinorhizobium medicae WSM419 hypothetical protein YP_001328504.1 2964420 D 366394 CDS YP_001328505.1 150398038 5323710 2965056..2966318 1 NC_009636.1 PFAM: Tetratricopeptide TPR_4; KEGG: sme:SMc03144 hypothetical protein; hypothetical protein 2966318 5323710 Smed_2840 Sinorhizobium medicae WSM419 hypothetical protein YP_001328505.1 2965056 D 366394 CDS YP_001328506.1 150398039 5323711 complement(2966343..2967386) 1 NC_009636.1 KEGG: sme:SMc03143 hypothetical protein; hypothetical protein 2967386 5323711 Smed_2841 Sinorhizobium medicae WSM419 hypothetical protein YP_001328506.1 2966343 R 366394 CDS YP_001328507.1 150398040 5323712 2967709..2969694 1 NC_009636.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mlo:mll2297 hypothetical protein; diguanylate cyclase/phosphodiesterase 2969694 5323712 Smed_2842 Sinorhizobium medicae WSM419 diguanylate cyclase/phosphodiesterase YP_001328507.1 2967709 D 366394 CDS YP_001328508.1 150398041 5323713 complement(2969759..2970490) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc03140 putative transcription regulator protein; GntR family transcriptional regulator 2970490 5323713 Smed_2843 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328508.1 2969759 R 366394 CDS YP_001328509.1 150398042 5323714 2970719..2971732 1 NC_009636.1 PFAM: sugar isomerase (SIS); KEGG: sme:SMc03139 hypothetical protein; sugar isomerase (SIS) 2971732 5323714 Smed_2844 Sinorhizobium medicae WSM419 sugar isomerase (SIS) YP_001328509.1 2970719 D 366394 CDS YP_001328510.1 150398043 5323715 2971817..2972629 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc03138 putative sugar kinase protein; ribokinase-like domain-containing protein 2972629 5323715 Smed_2845 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001328510.1 2971817 D 366394 CDS YP_001328511.1 150398044 5323716 complement(2972988..2973743) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03135 putative amino-acid transport system ATP-binding ABC transporter protein; ABC transporter-like protein 2973743 5323716 Smed_2846 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328511.1 2972988 R 366394 CDS YP_001328512.1 150398045 5323717 complement(2973759..2974640) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc03134 hypothetical protein; hypothetical protein 2974640 5323717 Smed_2847 Sinorhizobium medicae WSM419 hypothetical protein YP_001328512.1 2973759 R 366394 CDS YP_001328513.1 150398046 5323718 complement(2974630..2975601) 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03133 putative amino-acid transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 2975601 5323718 Smed_2848 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001328513.1 2974630 R 366394 CDS YP_001328514.1 150398047 5323719 complement(2975619..2976899) 1 NC_009636.1 PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc03132 putative oxidoreductase protein; FAD dependent oxidoreductase 2976899 5323719 Smed_2849 Sinorhizobium medicae WSM419 FAD dependent oxidoreductase YP_001328514.1 2975619 R 366394 CDS YP_001328515.1 150398048 5323720 complement(2976966..2977793) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc03131 putative amino acid-binding periplasmic ABC transporter protein; extracellular solute-binding protein 2977793 5323720 Smed_2850 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328515.1 2976966 R 366394 CDS YP_001328516.1 150398049 5323721 complement(2978142..2979092) 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc03130 hypothetical protein; xylose isomerase domain-containing protein 2979092 5323721 Smed_2851 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001328516.1 2978142 R 366394 CDS YP_001328517.1 150398050 5323722 complement(2979125..2979892) 1 NC_009636.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sme:SMc03129 putative glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 2979892 5323722 Smed_2852 Sinorhizobium medicae WSM419 glycerophosphoryl diester phosphodiesterase YP_001328517.1 2979125 R 366394 CDS YP_001328518.1 150398051 5323723 complement(2979899..2980780) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03128 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2980780 5323723 Smed_2853 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328518.1 2979899 R 366394 CDS YP_001328519.1 150398052 5323724 complement(2980900..2981826) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03127 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2981826 5323724 Smed_2854 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328519.1 2980900 R 366394 CDS YP_001328520.1 150398053 5323725 complement(2981823..2982821) 1 NC_009636.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc03126 putative transport system ATP-binding ABC transporter protein; oligopeptide/dipeptide ABC transporter ATPase 2982821 5323725 Smed_2855 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter ATPase YP_001328520.1 2981823 R 366394 CDS YP_001328521.1 150398054 5323726 complement(2982818..2983834) 1 NC_009636.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc03125 putative transport system ATP-binding ABC transporter protein; oligopeptide/dipeptide ABC transporter ATPase 2983834 5323726 Smed_2856 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter ATPase YP_001328521.1 2982818 R 366394 CDS YP_001328522.1 150398055 5323727 complement(2983926..2985554) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc03124 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 2985554 5323727 Smed_2857 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328522.1 2983926 R 366394 CDS YP_001328523.1 150398056 5323728 2985871..2986803 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: sme:SMc03123 putative transcriptional regulator protein; DeoR family transcriptional regulator 2986803 5323728 Smed_2858 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328523.1 2985871 D 366394 CDS YP_001328524.1 150398057 5323729 complement(2986873..2987283) 1 NC_009636.1 KEGG: rpe:RPE_4065 PilT protein domain protein; PilT domain-containing protein 2987283 5323729 Smed_2859 Sinorhizobium medicae WSM419 PilT domain-containing protein YP_001328524.1 2986873 R 366394 CDS YP_001328525.1 150398058 5323730 complement(2987370..2988299) 1 NC_009636.1 PFAM: Integrase catalytic region; KEGG: atc:AGR_L_547 hypothetical protein; integrase catalytic subunit 2988299 5323730 Smed_2860 Sinorhizobium medicae WSM419 integrase catalytic subunit YP_001328525.1 2987370 R 366394 CDS YP_001328526.1 150398059 5323731 complement(2988293..2988559) 1 NC_009636.1 PFAM: transposase IS3/IS911 family protein; KEGG: atc:AGR_L_545 hypothetical protein; transposase IS3/IS911 family protein 2988559 5323731 Smed_2861 Sinorhizobium medicae WSM419 transposase IS3/IS911 family protein YP_001328526.1 2988293 R 366394 CDS YP_001328527.1 150398060 5323732 complement(2988713..2988979) 1 NC_009636.1 KEGG: fra:Francci3_0246 Rv0623-like transcription factor; hypothetical protein 2988979 5323732 Smed_2862 Sinorhizobium medicae WSM419 hypothetical protein YP_001328527.1 2988713 R 366394 CDS YP_001328528.1 150398061 5323739 complement(2995617..2996564) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc03122 putative transcription regulator protein; LysR family transcriptional regulator 2996564 5323739 Smed_2863 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328528.1 2995617 R 366394 CDS YP_001328529.1 150398062 5323740 2996806..2998011 1 NC_009636.1 KEGG: sme:SMc03121 putative periplasmic binding ABC transporter protein; putative periplasmic binding ABC transporter protein 2998011 5323740 Smed_2864 Sinorhizobium medicae WSM419 putative periplasmic binding ABC transporter protein YP_001328529.1 2996806 D 366394 CDS YP_001328530.1 150398063 5323741 2998023..2998808 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03120 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2998808 5323741 Smed_2865 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328530.1 2998023 D 366394 CDS YP_001328531.1 150398064 5323742 2998808..2999509 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03119 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2999509 5323742 Smed_2866 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328531.1 2998808 D 366394 CDS YP_001328532.1 150398065 5323743 2999513..3000400 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc03118 putative permease ABC transporter protein; inner-membrane translocator 3000400 5323743 Smed_2867 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328532.1 2999513 D 366394 CDS YP_001328533.1 150398066 5323744 3000402..3001394 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc03117 putative permease ABC transporter protein; inner-membrane translocator 3001394 5323744 Smed_2868 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328533.1 3000402 D 366394 CDS YP_001328534.1 150398067 5323745 3001539..3003134 1 NC_009636.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: sme:SMc03116 putative alcohol dehydrogenase protein; glucose-methanol-choline oxidoreductase 3003134 5323745 Smed_2869 Sinorhizobium medicae WSM419 glucose-methanol-choline oxidoreductase YP_001328534.1 3001539 D 366394 CDS YP_001328535.1 150398068 5323746 complement(3003180..3006953) 1 NC_009636.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 3006953 metH 5323746 metH Sinorhizobium medicae WSM419 B12-dependent methionine synthase YP_001328535.1 3003180 R 366394 CDS YP_001328536.1 150398069 5323747 complement(3007133..3008281) 1 NC_009636.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: sme:SMc03111 mannose-6-phosphate isomerase protein; mannose-6-phosphate isomerase 3008281 5323747 Smed_2871 Sinorhizobium medicae WSM419 mannose-6-phosphate isomerase YP_001328536.1 3007133 R 366394 CDS YP_001328537.1 150398070 5323748 complement(3008298..3008792) 1 NC_009636.1 PFAM: protein of unknown function DUF336; KEGG: sme:SMc03110 conserved hypothetical protein; hypothetical protein 3008792 5323748 Smed_2872 Sinorhizobium medicae WSM419 hypothetical protein YP_001328537.1 3008298 R 366394 CDS YP_001328538.1 150398071 5323749 complement(3008857..3009753) 1 NC_009636.1 PFAM: ROK family protein; KEGG: sme:SMc03109 hypothetical protein; ROK family protein 3009753 5323749 Smed_2873 Sinorhizobium medicae WSM419 ROK family protein YP_001328538.1 3008857 R 366394 CDS YP_001328539.1 150398072 5323751 complement(3010234..3010440) 1 NC_009636.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rle:pRL100052 putative cold shock protein CspA; cold-shock DNA-binding domain-containing protein 3010440 5323751 Smed_2874 Sinorhizobium medicae WSM419 cold-shock DNA-binding domain-containing protein YP_001328539.1 3010234 R 366394 CDS YP_001328540.1 150398073 5323752 complement(3010605..3010883) 1 NC_009636.1 hypothetical protein 3010883 5323752 Smed_2875 Sinorhizobium medicae WSM419 hypothetical protein YP_001328540.1 3010605 R 366394 CDS YP_001328541.1 150398074 5323753 3011121..3011489 1 NC_009636.1 PFAM: PRC-barrel domain protein; KEGG: sme:SMb20522 hypothetical protein; PRC-barrel domain-containing protein 3011489 5323753 Smed_2876 Sinorhizobium medicae WSM419 PRC-barrel domain-containing protein YP_001328541.1 3011121 D 366394 CDS YP_001328542.1 150398075 5323754 complement(3011621..3011815) 1 NC_009636.1 KEGG: rle:RL0462 putative transmembrane protein; putative transmembrane protein 3011815 5323754 Smed_2877 Sinorhizobium medicae WSM419 putative transmembrane protein YP_001328542.1 3011621 R 366394 CDS YP_001328543.1 150398076 5323755 complement(3011926..3012651) 1 NC_009636.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sme:SMc03106 hypothetical protein; hypothetical protein 3012651 5323755 Smed_2878 Sinorhizobium medicae WSM419 hypothetical protein YP_001328543.1 3011926 R 366394 CDS YP_001328544.1 150398077 5323756 3012811..3013986 1 NC_009636.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3013986 5323756 Smed_2879 Sinorhizobium medicae WSM419 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001328544.1 3012811 D 366394 CDS YP_001328545.1 150398078 5323757 complement(3014115..3015335) 1 NC_009636.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 3015335 5323757 Smed_2880 Sinorhizobium medicae WSM419 5-aminolevulinate synthase YP_001328545.1 3014115 R 366394 CDS YP_001328546.1 150398079 5323758 complement(3015678..3016475) 1 NC_009636.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: sme:SMc03103 putative carbon monoxide dehydrogenase medium subunit transmembrane protein; carbon monoxide dehydrogenase 3016475 5323758 Smed_2881 Sinorhizobium medicae WSM419 carbon monoxide dehydrogenase YP_001328546.1 3015678 R 366394 CDS YP_001328547.1 150398080 5323759 complement(3016491..3018836) 1 NC_009636.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMc03102 putative carbon monoxide dehydrogenase large subunit transmembrane protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 3018836 5323759 Smed_2882 Sinorhizobium medicae WSM419 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001328547.1 3016491 R 366394 CDS YP_001328548.1 150398081 5323760 complement(3018936..3019424) 1 NC_009636.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMc03101 putative carbon monoxide dehydrogenase small subunit protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3019424 5323760 Smed_2883 Sinorhizobium medicae WSM419 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001328548.1 3018936 R 366394 CDS YP_001328549.1 150398082 5323761 3019690..3020100 1 NC_009636.1 PFAM: 17 kDa surface antigen; KEGG: sme:SMc03100 hypothetical protein; 17 kDa surface antigen 3020100 5323761 Smed_2884 Sinorhizobium medicae WSM419 17 kDa surface antigen YP_001328549.1 3019690 D 366394 CDS YP_001328550.1 150398083 5323762 complement(3020272..3022038) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc03099 putative adenylate cyclase protein; adenylyl cyclase class-3/4/guanylyl cyclase 3022038 5323762 Smed_2885 Sinorhizobium medicae WSM419 adenylyl cyclase class-3/4/guanylyl cyclase YP_001328550.1 3020272 R 366394 CDS YP_001328551.1 150398084 5323763 3022256..3023128 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; KEGG: sme:SMc03098 hypothetical protein; alpha/beta hydrolase fold protein 3023128 5323763 Smed_2886 Sinorhizobium medicae WSM419 alpha/beta hydrolase fold protein YP_001328551.1 3022256 D 366394 CDS YP_001328552.1 150398085 5323764 3023390..3025303 1 NC_009636.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sme:SMc03097 putative outer membrane protein; surface antigen (D15) 3025303 5323764 Smed_2887 Sinorhizobium medicae WSM419 surface antigen (D15) YP_001328552.1 3023390 D 366394 CDS YP_001328553.1 150398086 5323765 3025440..3031049 1 NC_009636.1 PFAM: protein of unknown function DUF490; KEGG: sme:SMc03096 hypothetical signal peptide protein; hypothetical protein 3031049 5323765 Smed_2888 Sinorhizobium medicae WSM419 hypothetical protein YP_001328553.1 3025440 D 366394 CDS YP_001328554.1 150398087 5323766 complement(3031174..3031653) 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc03093 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3031653 5323766 Smed_2889 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001328554.1 3031174 R 366394 CDS YP_001328555.1 150398088 5323767 complement(3031856..3032290) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc03092 putative transcription regulator protein; AsnC family transcriptional regulator 3032290 5323767 Smed_2890 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001328555.1 3031856 R 366394 CDS YP_001328556.1 150398089 5323768 3032444..3033367 1 NC_009636.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sme:SMc03091 probable arginase protein; arginase 3033367 5323768 Smed_2891 Sinorhizobium medicae WSM419 arginase YP_001328556.1 3032444 D 366394 CDS YP_001328557.1 150398090 5323769 3033587..3034066 1 NC_009636.1 PFAM: CheW domain protein; KEGG: sme:SMc03090 putative chemotaxis protein; putative CheW protein 3034066 5323769 Smed_2892 Sinorhizobium medicae WSM419 putative CheW protein YP_001328557.1 3033587 D 366394 CDS YP_001328558.1 150398091 5323770 3034164..3035933 1 NC_009636.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sme:SMc03087 probable chemoreceptor (methyl-accepting chemotaxis protein); methyl-accepting chemotaxis sensory transducer 3035933 5323770 Smed_2893 Sinorhizobium medicae WSM419 methyl-accepting chemotaxis sensory transducer YP_001328558.1 3034164 D 366394 CDS YP_001328559.1 150398092 5323771 complement(3036010..3036942) 1 NC_009636.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: hne:HNE_2108 ISHne4, transposase; transposase IS116/IS110/IS902 family protein 3036942 5323771 Smed_2894 Sinorhizobium medicae WSM419 transposase IS116/IS110/IS902 family protein YP_001328559.1 3036010 R 366394 CDS YP_001328560.1 150398093 5323772 complement(3037230..3037460) 1 NC_009636.1 KEGG: sme:SMc03086 putative NAD-dependent formate dehydrogenase delta subunit protein; putative NAD-dependent formate dehydrogenase subunit delta 3037460 5323772 Smed_2895 Sinorhizobium medicae WSM419 putative NAD-dependent formate dehydrogenase subunit delta YP_001328560.1 3037230 R 366394 CDS YP_001328561.1 150398094 5323773 complement(3037478..3038386) 1 NC_009636.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 3038386 5323773 Smed_2896 Sinorhizobium medicae WSM419 formate dehydrogenase accessory protein YP_001328561.1 3037478 R 366394 CDS YP_001328562.1 150398095 5323774 complement(3038395..3041274) 1 NC_009636.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMc04444 probable NAD-dependent formate dehydrogenase alpha subunit protein; formate dehydrogenase subunit alpha 3041274 5323774 Smed_2897 Sinorhizobium medicae WSM419 formate dehydrogenase subunit alpha YP_001328562.1 3038395 R 366394 CDS YP_001328563.1 150398096 5323775 complement(3041357..3042913) 1 NC_009636.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sme:SMc02525 putative NAD-dependent formate dehydrogenase beta subunit protein; NADH dehydrogenase (quinone) 3042913 5323775 Smed_2898 Sinorhizobium medicae WSM419 NADH dehydrogenase (quinone) YP_001328563.1 3041357 R 366394 CDS YP_001328564.1 150398097 5323776 complement(3042910..3043389) 1 NC_009636.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 3043389 5323776 Smed_2899 Sinorhizobium medicae WSM419 formate dehydrogenase subunit gamma YP_001328564.1 3042910 R 366394 CDS YP_001328565.1 150398098 5323777 complement(3043566..3044462) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02523 putative transcription regulator protein; LysR family transcriptional regulator 3044462 5323777 Smed_2900 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328565.1 3043566 R 366394 CDS YP_001328566.1 150398099 5323778 complement(3044552..3045322) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02522 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 3045322 5323778 Smed_2901 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328566.1 3044552 R 366394 CDS YP_001328567.1 150398100 5323779 3045500..3046264 1 NC_009636.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMc02521 putative glycerol-3-phosphate regulon repressor transcription regulator protein; DeoR family transcriptional regulator 3046264 5323779 Smed_2902 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328567.1 3045500 D 366394 CDS YP_001328568.1 150398101 5323780 3046392..3047903 1 NC_009636.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3047903 glpD 5323780 glpD Sinorhizobium medicae WSM419 glycerol-3-phosphate dehydrogenase YP_001328568.1 3046392 D 366394 CDS YP_001328569.1 150398102 5323781 3047945..3049015 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02519 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3049015 5323781 Smed_2904 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328569.1 3047945 D 366394 CDS YP_001328570.1 150398103 5323782 3049038..3050108 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02518 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3050108 5323782 Smed_2905 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328570.1 3049038 D 366394 CDS YP_001328571.1 150398104 5323783 3050110..3050976 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02517 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3050976 5323783 Smed_2906 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328571.1 3050110 D 366394 CDS YP_001328572.1 150398105 5323784 3050997..3051821 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02516 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3051821 5323784 Smed_2907 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328572.1 3050997 D 366394 CDS YP_001328573.1 150398106 5323785 3051835..3052254 1 NC_009636.1 KEGG: sme:SMc02515 hypothetical protein; hypothetical protein 3052254 5323785 Smed_2908 Sinorhizobium medicae WSM419 hypothetical protein YP_001328573.1 3051835 D 366394 CDS YP_001328574.1 150398107 5323786 3052335..3054059 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc02514 putative multiple sugar transport system substrate-binding protein; extracellular solute-binding protein 3054059 5323786 Smed_2909 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328574.1 3052335 D 366394 CDS YP_001328575.1 150398108 5323788 3055977..3057461 1 NC_009636.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sme:SMc02512 putative permease transmembrane protein; uracil-xanthine permease 3057461 5323788 Smed_2911 Sinorhizobium medicae WSM419 uracil-xanthine permease YP_001328575.1 3055977 D 366394 CDS YP_001328576.1 150398109 5323789 3057589..3058494 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02511 hypothetical protein; hypothetical protein 3058494 5323789 Smed_2912 Sinorhizobium medicae WSM419 hypothetical protein YP_001328576.1 3057589 D 366394 CDS YP_001328577.1 150398110 5323790 complement(3058500..3058928) 1 NC_009636.1 PFAM: ferric-uptake regulator; KEGG: sme:SMc02510 probable ferric uptake regulation protein; ferric uptake regulator family protein 3058928 5323790 Smed_2913 Sinorhizobium medicae WSM419 ferric uptake regulator family protein YP_001328577.1 3058500 R 366394 CDS YP_001328578.1 150398111 5323791 3059050..3059955 1 NC_009636.1 PFAM: periplasmic solute binding protein; KEGG: sme:SMc02509 putative iron-binding periplasmic ABC transporter protein; periplasmic solute binding protein 3059955 5323791 Smed_2914 Sinorhizobium medicae WSM419 periplasmic solute binding protein YP_001328578.1 3059050 D 366394 CDS YP_001328579.1 150398112 5323792 3059952..3060887 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02508 putative iron transport ATP-binding ABC transporter protein; ABC transporter-like protein 3060887 5323792 Smed_2915 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328579.1 3059952 D 366394 CDS YP_001328580.1 150398113 5323793 3060884..3061741 1 NC_009636.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02507 putative iron transport system membrane ABC transporter protein; ABC-3 protein 3061741 5323793 Smed_2916 Sinorhizobium medicae WSM419 ABC-3 protein YP_001328580.1 3060884 D 366394 CDS YP_001328581.1 150398114 5323794 3061738..3062595 1 NC_009636.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02506 putative iron transport system membrane ABC transporter protein; ABC-3 protein 3062595 5323794 Smed_2917 Sinorhizobium medicae WSM419 ABC-3 protein YP_001328581.1 3061738 D 366394 CDS YP_001328582.1 150398115 5323795 3062723..3063568 1 NC_009636.1 KEGG: sme:SMc02505 hypothetical protein; hypothetical protein 3063568 5323795 Smed_2918 Sinorhizobium medicae WSM419 hypothetical protein YP_001328582.1 3062723 D 366394 CDS YP_001328583.1 150398116 5323796 complement(3063580..3064044) 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc02504 putative transcription regulator protein; AsnC family transcriptional regulator 3064044 5323796 Smed_2919 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001328583.1 3063580 R 366394 CDS YP_001328584.1 150398117 5323797 3064138..3065241 1 NC_009636.1 PFAM: Saccharopine dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sme:SMc02503 hypothetical protein; saccharopine dehydrogenase 3065241 5323797 Smed_2920 Sinorhizobium medicae WSM419 saccharopine dehydrogenase YP_001328584.1 3064138 D 366394 CDS YP_001328585.1 150398118 5323798 complement(3065506..3065910) 1 NC_009636.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 3065910 atpC 5323798 atpC Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit epsilon YP_001328585.1 3065506 R 366394 CDS YP_001328586.1 150398119 5323799 complement(3066033..3067562) 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3067562 5323799 Smed_2922 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit beta YP_001328586.1 3066033 R 366394 CDS YP_001328587.1 150398120 5323800 complement(3067587..3068462) 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 3068462 5323800 Smed_2923 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit gamma YP_001328587.1 3067587 R 366394 CDS YP_001328588.1 150398121 5323801 complement(3068490..3070019) 1 NC_009636.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3070019 5323801 Smed_2924 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit alpha YP_001328588.1 3068490 R 366394 CDS YP_001328589.1 150398122 5323802 complement(3070019..3070585) 1 NC_009636.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3070585 5323802 Smed_2925 Sinorhizobium medicae WSM419 F0F1 ATP synthase subunit delta YP_001328589.1 3070019 R 366394 CDS YP_001328590.1 150398123 5323803 complement(3070823..3071209) 1 NC_009636.1 KEGG: sme:SMc02497 hypothetical protein; hypothetical protein 3071209 5323803 Smed_2926 Sinorhizobium medicae WSM419 hypothetical protein YP_001328590.1 3070823 R 366394 CDS YP_001328591.1 150398124 5323804 complement(3071332..3073536) 1 NC_009636.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 3073536 5323804 Smed_2927 Sinorhizobium medicae WSM419 primosome assembly protein PriA YP_001328591.1 3071332 R 366394 CDS YP_001328592.1 150398125 5323805 3073712..3074365 1 NC_009636.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 3074365 5323805 Smed_2928 Sinorhizobium medicae WSM419 putative translaldolase YP_001328592.1 3073712 D 366394 CDS YP_001328593.1 150398126 5323806 complement(3074440..3075906) 1 NC_009636.1 KEGG: sme:SMc02494 hypothetical protein; hypothetical protein 3075906 5323806 Smed_2929 Sinorhizobium medicae WSM419 hypothetical protein YP_001328593.1 3074440 R 366394 CDS YP_001328594.1 150398127 5323807 3076102..3077169 1 NC_009636.1 KEGG: sme:SMc02492 hypothetical protein; hypothetical protein 3077169 5323807 Smed_2930 Sinorhizobium medicae WSM419 hypothetical protein YP_001328594.1 3076102 D 366394 CDS YP_001328595.1 150398128 5323808 complement(3077230..3078378) 1 NC_009636.1 KEGG: sme:SMc02491 hypothetical protein; hypothetical protein 3078378 5323808 Smed_2931 Sinorhizobium medicae WSM419 hypothetical protein YP_001328595.1 3077230 R 366394 CDS YP_001328596.1 150398129 5323809 complement(3078445..3079359) 1 NC_009636.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sme:SMc02490 hypothetical protein; phospholipid/glycerol acyltransferase 3079359 5323809 Smed_2932 Sinorhizobium medicae WSM419 phospholipid/glycerol acyltransferase YP_001328596.1 3078445 R 366394 CDS YP_001328597.1 150398130 5323810 3079559..3080500 1 NC_009636.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3080500 xerC 5323810 xerC Sinorhizobium medicae WSM419 site-specific tyrosine recombinase XerC YP_001328597.1 3079559 D 366394 CDS YP_001328598.1 150398131 5323811 3080586..3081677 1 NC_009636.1 PFAM: GumN family protein; KEGG: sme:SMc02488 hypothetical protein; GumN family protein 3081677 5323811 Smed_2934 Sinorhizobium medicae WSM419 GumN family protein YP_001328598.1 3080586 D 366394 CDS YP_001328599.1 150398132 5323812 complement(3081661..3082155) 1 NC_009636.1 KEGG: atc:AGR_C_4769 hypothetical protein; hypothetical protein 3082155 5323812 Smed_2935 Sinorhizobium medicae WSM419 hypothetical protein YP_001328599.1 3081661 R 366394 CDS YP_001328600.1 150398133 5323813 complement(3082285..3083691) 1 NC_009636.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3083691 5323813 Smed_2936 Sinorhizobium medicae WSM419 dihydrolipoamide dehydrogenase YP_001328600.1 3082285 R 366394 CDS YP_001328601.1 150398134 5323814 complement(3083742..3084494) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc02486 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 3084494 5323814 Smed_2937 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328601.1 3083742 R 366394 CDS YP_001328602.1 150398135 5323815 complement(3084491..3084991) 1 NC_009636.1 KEGG: sme:SMc02485 conserved hypothetical signal peptide protein; putative signal peptide protein 3084991 5323815 Smed_2938 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328602.1 3084491 R 366394 CDS YP_001328603.1 150398136 5323816 complement(3084991..3085635) 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc02484 putative amino acid efflux transmembrane protein; lysine exporter protein LysE/YggA 3085635 5323816 Smed_2939 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001328603.1 3084991 R 366394 CDS YP_001328604.1 150398137 5323817 complement(3085800..3087047) 1 NC_009636.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 3087047 5323817 Smed_2940 Sinorhizobium medicae WSM419 dihydrolipoamide succinyltransferase YP_001328604.1 3085800 R 366394 CDS YP_001328605.1 150398138 5323818 complement(3087097..3090093) 1 NC_009636.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3090093 sucA 5323818 sucA Sinorhizobium medicae WSM419 2-oxoglutarate dehydrogenase E1 component YP_001328605.1 3087097 R 366394 CDS YP_001328606.1 150398139 5323819 complement(3090374..3091276) 1 NC_009636.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 3091276 5323819 Smed_2942 Sinorhizobium medicae WSM419 succinyl-CoA synthetase subunit alpha YP_001328606.1 3090374 R 366394 CDS YP_001328607.1 150398140 5323820 complement(3091283..3092479) 1 NC_009636.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 3092479 sucC 5323820 sucC Sinorhizobium medicae WSM419 succinyl-CoA synthetase subunit beta YP_001328607.1 3091283 R 366394 CDS YP_001328608.1 150398141 5323821 complement(3092513..3093475) 1 NC_009636.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 3093475 5323821 Smed_2944 Sinorhizobium medicae WSM419 malate dehydrogenase YP_001328608.1 3092513 R 366394 CDS YP_001328609.1 150398142 5323822 complement(3093659..3094888) 1 NC_009636.1 PFAM: AFG1-family ATPase; KEGG: sme:SMc02478 hypothetical protein; AFG1 family ATPase 3094888 5323822 Smed_2945 Sinorhizobium medicae WSM419 AFG1 family ATPase YP_001328609.1 3093659 R 366394 CDS YP_001328610.1 150398143 5323823 complement(3094931..3095470) 1 NC_009636.1 PFAM: outer membrane lipoprotein omp19; KEGG: sme:SMc02475 putative outer membrane lipoprotein precursor; outer membrane lipoprotein omp19 3095470 5323823 Smed_2946 Sinorhizobium medicae WSM419 outer membrane lipoprotein omp19 YP_001328610.1 3094931 R 366394 CDS YP_001328611.1 150398144 5323824 complement(3095639..3096709) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc02474 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3096709 5323824 Smed_2947 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328611.1 3095639 R 366394 CDS YP_001328612.1 150398145 5323825 complement(3096750..3097598) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02473 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3097598 5323825 Smed_2948 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328612.1 3096750 R 366394 CDS YP_001328613.1 150398146 5323826 complement(3097591..3098499) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02472 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3098499 5323826 Smed_2949 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328613.1 3097591 R 366394 CDS YP_001328614.1 150398147 5323827 complement(3098606..3099913) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc02471 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 3099913 5323827 Smed_2950 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328614.1 3098606 R 366394 CDS YP_001328615.1 150398148 5323828 3100121..3101326 1 NC_009636.1 PFAM: ROK family protein; KEGG: sme:SMc02470 putative transcription regulator protein; ROK family protein 3101326 5323828 Smed_2951 Sinorhizobium medicae WSM419 ROK family protein YP_001328615.1 3100121 D 366394 CDS YP_001328616.1 150398149 5323829 3101367..3102467 1 NC_009636.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: sme:SMc02469 putative oxidoreductase protein; oxidoreductase domain-containing protein 3102467 5323829 Smed_2952 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328616.1 3101367 D 366394 CDS YP_001328617.1 150398150 5323830 3102488..3103129 1 NC_009636.1 KEGG: sme:SMc02468 hypothetical protein; hypothetical protein 3103129 5323830 Smed_2953 Sinorhizobium medicae WSM419 hypothetical protein YP_001328617.1 3102488 D 366394 CDS YP_001328618.1 150398151 5323831 complement(3103290..3103556) 1 NC_009636.1 hypothetical protein 3103556 5323831 Smed_2954 Sinorhizobium medicae WSM419 hypothetical protein YP_001328618.1 3103290 R 366394 CDS YP_001328619.1 150398152 5323832 complement(3103659..3104255) 1 NC_009636.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: sme:SMc02467 probable peptide methionine sulfoxide reductase protein; peptide methionine sulfoxide reductase 3104255 5323832 Smed_2955 Sinorhizobium medicae WSM419 peptide methionine sulfoxide reductase YP_001328619.1 3103659 R 366394 CDS YP_001328620.1 150398153 5323833 complement(3104405..3105184) 1 NC_009636.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3105184 sdhB 5323833 sdhB Sinorhizobium medicae WSM419 succinate dehydrogenase iron-sulfur subunit YP_001328620.1 3104405 R 366394 CDS YP_001328621.1 150398154 5323834 complement(3105203..3107044) 1 NC_009636.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3107044 sdhA 5323834 sdhA Sinorhizobium medicae WSM419 succinate dehydrogenase flavoprotein subunit YP_001328621.1 3105203 R 366394 CDS YP_001328622.1 150398155 5323835 complement(3107052..3107432) 1 NC_009636.1 TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sme:SMc02464 probable succinate dehydrogenase membrane anchor subunit protein; succinate dehydrogenase hydrophobic membrane anchor 3107432 5323835 Smed_2958 Sinorhizobium medicae WSM419 succinate dehydrogenase hydrophobic membrane anchor YP_001328622.1 3107052 R 366394 CDS YP_001328623.1 150398156 5323836 complement(3107444..3107836) 1 NC_009636.1 TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sme:SMc02463 probable succinate dehydrogenase cytochrome B-556 subunit transmembrane protein; succinate dehydrogenase cytochrome b556 subunit 3107836 5323836 Smed_2959 Sinorhizobium medicae WSM419 succinate dehydrogenase cytochrome b556 subunit YP_001328623.1 3107444 R 366394 CDS YP_001328624.1 150398157 5323837 3108137..3108757 1 NC_009636.1 KEGG: sme:SMc03225 hypothetical/unknown protein; hypothetical protein 3108757 5323837 Smed_2960 Sinorhizobium medicae WSM419 hypothetical protein YP_001328624.1 3108137 D 366394 CDS YP_001328625.1 150398158 5323838 complement(3108787..3109443) 1 NC_009636.1 KEGG: sme:SMc03226 hypothetical protein; hypothetical protein 3109443 5323838 Smed_2961 Sinorhizobium medicae WSM419 hypothetical protein YP_001328625.1 3108787 R 366394 CDS YP_001328626.1 150398159 5323839 complement(3109457..3109888) 1 NC_009636.1 PFAM: protein of unknown function DUF55; KEGG: sme:SMc03227 hypothetical protein; hypothetical protein 3109888 5323839 Smed_2962 Sinorhizobium medicae WSM419 hypothetical protein YP_001328626.1 3109457 R 366394 CDS YP_001328627.1 150398160 5323840 complement(3109895..3110188) 1 NC_009636.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 3110188 5323840 Smed_2963 Sinorhizobium medicae WSM419 YciI-like protein YP_001328627.1 3109895 R 366394 CDS YP_001328628.1 150398161 5323841 complement(3110205..3111200) 1 NC_009636.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3111200 gpsA 5323841 gpsA Sinorhizobium medicae WSM419 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001328628.1 3110205 R 366394 CDS YP_001328629.1 150398162 5323842 complement(3111205..3112287) 1 NC_009636.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 3112287 5323842 Smed_2965 Sinorhizobium medicae WSM419 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001328629.1 3111205 R 366394 CDS YP_001328630.1 150398163 5323843 3112412..3113404 1 NC_009636.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3113404 hemC 5323843 hemC Sinorhizobium medicae WSM419 porphobilinogen deaminase YP_001328630.1 3112412 D 366394 CDS YP_001328631.1 150398164 5323844 3113520..3114236 1 NC_009636.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; uroporphyrinogen-III synthase 3114236 5323844 Smed_2967 Sinorhizobium medicae WSM419 uroporphyrinogen-III synthase YP_001328631.1 3113520 D 366394 CDS YP_001328632.1 150398165 5323845 3114373..3115761 1 NC_009636.1 KEGG: sme:SMc03233 hypothetical protein; hypothetical protein 3115761 5323845 Smed_2968 Sinorhizobium medicae WSM419 hypothetical protein YP_001328632.1 3114373 D 366394 CDS YP_001328633.1 150398166 5323846 3115874..3117529 1 NC_009636.1 PFAM: HemY domain protein; KEGG: sme:SMc03234 hypothetical protein; HemY domain-containing protein 3117529 5323846 Smed_2969 Sinorhizobium medicae WSM419 HemY domain-containing protein YP_001328633.1 3115874 D 366394 CDS YP_001328634.1 150398167 5323847 3117555..3118034 1 NC_009636.1 PFAM: protein of unknown function DUF1332; KEGG: sme:SMc03235 hypothetical protein; hypothetical protein 3118034 5323847 Smed_2970 Sinorhizobium medicae WSM419 hypothetical protein YP_001328634.1 3117555 D 366394 CDS YP_001328635.1 150398168 5323848 3118037..3118783 1 NC_009636.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3118783 5323848 Smed_2971 Sinorhizobium medicae WSM419 glutamine amidotransferase YP_001328635.1 3118037 D 366394 CDS YP_001328636.1 150398169 5323849 complement(3118942..3120189) 1 NC_009636.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: sme:SMc03237 putative transport transmembrane protein; major facilitator superfamily transporter 3120189 5323849 Smed_2972 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001328636.1 3118942 R 366394 CDS YP_001328637.1 150398170 5323850 3120393..3120716 1 NC_009636.1 PFAM: protein of unknown function YGGT; KEGG: sme:SMc03238 hypothetical protein; hypothetical protein 3120716 5323850 Smed_2973 Sinorhizobium medicae WSM419 hypothetical protein YP_001328637.1 3120393 D 366394 CDS YP_001328638.1 150398171 5323851 complement(3120881..3121480) 1 NC_009636.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 3121480 5323851 Smed_2974 Sinorhizobium medicae WSM419 inorganic pyrophosphatase YP_001328638.1 3120881 R 366394 CDS YP_001328639.1 150398172 5323852 complement(3121893..3122399) 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc03241 hypothetical protein; N-acetyltransferase GCN5 3122399 5323852 Smed_2975 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328639.1 3121893 R 366394 CDS YP_001328640.1 150398173 5323853 complement(3122613..3124439) 1 NC_009636.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sme:SMc03242 probable GTP-binding protein (tyrosine phosphorylated protein A); GTP-binding protein TypA 3124439 5323853 Smed_2976 Sinorhizobium medicae WSM419 GTP-binding protein TypA YP_001328640.1 3122613 R 366394 CDS YP_001328641.1 150398174 5323854 complement(3124575..3126137) 1 NC_009636.1 PFAM: Alkaline phosphatase; KEGG: sme:SMc03243 putative alkaline phosphatase transmembrane protein; alkaline phosphatase 3126137 5323854 Smed_2977 Sinorhizobium medicae WSM419 alkaline phosphatase YP_001328641.1 3124575 R 366394 CDS YP_001328642.1 150398175 5323855 complement(3126291..3126980) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bte:BTH_I1202 transcriptional regulator, GntR family; GntR family transcriptional regulator 3126980 5323855 Smed_2978 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328642.1 3126291 R 366394 CDS YP_001328643.1 150398176 5323856 3127146..3127943 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: mlo:mll5423 unknown protein; extracellular solute-binding protein 3127943 5323856 Smed_2979 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328643.1 3127146 D 366394 CDS YP_001328644.1 150398177 5323857 3128048..3128719 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll5422 ABC transporter permease protein; polar amino acid ABC transporter inner membrane subunit 3128719 5323857 Smed_2980 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001328644.1 3128048 D 366394 CDS YP_001328645.1 150398178 5323858 3128719..3129456 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tth:TTC0795 amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein 3129456 5323858 Smed_2981 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328645.1 3128719 D 366394 CDS YP_001328646.1 150398179 5323859 3129485..3130762 1 NC_009636.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: gvi:gll2601 probable aminotransferase; cysteine desulfurase 3130762 5323859 Smed_2982 Sinorhizobium medicae WSM419 cysteine desulfurase YP_001328646.1 3129485 D 366394 CDS YP_001328647.1 150398180 5323860 3130780..3132213 1 NC_009636.1 catalyzes the hydrolytic cleavage of imides that range from linear to heterocyclic and that include hydantoins, dihydropyrimidines, and phthalimides; dihydropyrimidinase 3132213 5323860 Smed_2983 Sinorhizobium medicae WSM419 dihydropyrimidinase YP_001328647.1 3130780 D 366394 CDS YP_001328648.1 150398181 5323861 3132426..3133733 1 NC_009636.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3133733 5323861 Smed_2984 Sinorhizobium medicae WSM419 amidase YP_001328648.1 3132426 D 366394 CDS YP_001328649.1 150398182 5323862 complement(3133738..3133899) 1 NC_009636.1 KEGG: sme:SMc03746 hypothetical/unknown protein; hypothetical protein 3133899 5323862 Smed_2985 Sinorhizobium medicae WSM419 hypothetical protein YP_001328649.1 3133738 R 366394 CDS YP_001328650.1 150398183 5323863 3134179..3134685 1 NC_009636.1 KEGG: sme:SMc03747 hypothetical protein; hypothetical protein 3134685 5323863 Smed_2986 Sinorhizobium medicae WSM419 hypothetical protein YP_001328650.1 3134179 D 366394 CDS YP_001328651.1 150398184 5323864 complement(3134784..3135440) 1 NC_009636.1 KEGG: bja:bll7663 hypothetical protein; hypothetical protein 3135440 5323864 Smed_2987 Sinorhizobium medicae WSM419 hypothetical protein YP_001328651.1 3134784 R 366394 CDS YP_001328652.1 150398185 5323865 3135635..3135766 1 NC_009636.1 hypothetical protein 3135766 5323865 Smed_2988 Sinorhizobium medicae WSM419 hypothetical protein YP_001328652.1 3135635 D 366394 CDS YP_001328653.1 150398186 5323866 3135916..3136494 1 NC_009636.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMb20491 hypothetical protein; isochorismatase hydrolase 3136494 5323866 Smed_2989 Sinorhizobium medicae WSM419 isochorismatase hydrolase YP_001328653.1 3135916 D 366394 CDS YP_001328654.1 150398187 5323867 3136592..3137005 1 NC_009636.1 KEGG: rsp:RSP_7172 hypothetical protein; hypothetical protein 3137005 5323867 Smed_2990 Sinorhizobium medicae WSM419 hypothetical protein YP_001328654.1 3136592 D 366394 CDS YP_001328655.1 150398188 5323868 3137036..3138295 1 NC_009636.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: rsp:RSP_3990 poly (3-hydroxybutyrate ) depolymerase; PHB depolymerase family esterase 3138295 5323868 Smed_2991 Sinorhizobium medicae WSM419 PHB depolymerase family esterase YP_001328655.1 3137036 D 366394 CDS YP_001328656.1 150398189 5323869 complement(3138487..3139806) 1 NC_009636.1 KEGG: rle:RL0064 hypothetical protein; hypothetical protein 3139806 5323869 Smed_2992 Sinorhizobium medicae WSM419 hypothetical protein YP_001328656.1 3138487 R 366394 CDS YP_001328657.1 150398190 5323870 complement(3139813..3143724) 1 NC_009636.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: rle:RL0065 putative glycosyl transferase; glycosyltransferase 3143724 5323870 Smed_2993 Sinorhizobium medicae WSM419 glycosyltransferase YP_001328657.1 3139813 R 366394 CDS YP_001328658.1 150398191 5323871 complement(3143899..3144468) 1 NC_009636.1 PFAM: Phosphoglycerate mutase; KEGG: sus:Acid_7225 phosphoglycerate mutase; phosphoglycerate mutase 3144468 5323871 Smed_2994 Sinorhizobium medicae WSM419 phosphoglycerate mutase YP_001328658.1 3143899 R 366394 CDS YP_001328659.1 150398192 5323872 complement(3144485..3146857) 1 NC_009636.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: rle:RL0066 putative xylulose-5-phosphate phosphoketolase; putative phosphoketolase 3146857 5323872 Smed_2995 Sinorhizobium medicae WSM419 putative phosphoketolase YP_001328659.1 3144485 R 366394 CDS YP_001328660.1 150398193 5323873 complement(3147005..3148039) 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: atc:AGR_C_1112 alcohol dehydrogenase; alcohol dehydrogenase 3148039 5323873 Smed_2996 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328660.1 3147005 R 366394 CDS YP_001328661.1 150398194 5323874 complement(3148112..3148783) 1 NC_009636.1 PFAM: CBS domain containing protein; transport-associated; KEGG: sme:SMa0636 hypothetical protein; signal-transduction protein 3148783 5323874 Smed_2997 Sinorhizobium medicae WSM419 signal-transduction protein YP_001328661.1 3148112 R 366394 CDS YP_001328662.1 150398195 5323875 complement(3148852..3149178) 1 NC_009636.1 hypothetical protein 3149178 5323875 Smed_2998 Sinorhizobium medicae WSM419 hypothetical protein YP_001328662.1 3148852 R 366394 CDS YP_001328663.1 150398196 5323876 3149283..3149546 1 NC_009636.1 hypothetical protein 3149546 5323876 Smed_2999 Sinorhizobium medicae WSM419 hypothetical protein YP_001328663.1 3149283 D 366394 CDS YP_001328664.1 150398197 5323877 3149671..3150042 1 NC_009636.1 KEGG: sme:SMa0633 hypothetical protein; hypothetical protein 3150042 5323877 Smed_3000 Sinorhizobium medicae WSM419 hypothetical protein YP_001328664.1 3149671 D 366394 CDS YP_001328665.1 150398198 5323878 3150222..3152303 1 NC_009636.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sme:SMa0630 hypothetical protein; mechanosensitive ion channel protein MscS 3152303 5323878 Smed_3001 Sinorhizobium medicae WSM419 mechanosensitive ion channel protein MscS YP_001328665.1 3150222 D 366394 CDS YP_001328666.1 150398199 5323879 3152611..3153867 1 NC_009636.1 PFAM: protein of unknown function DUF1212; KEGG: lbu:LBUL_0807 hypothetical protein; hypothetical protein 3153867 5323879 Smed_3002 Sinorhizobium medicae WSM419 hypothetical protein YP_001328666.1 3152611 D 366394 CDS YP_001328667.1 150398200 5323883 3155222..3155596 1 NC_009636.1 PFAM: ribosomal protein L21; KEGG: sme:SMc03770 50S ribosomal protein L21; 50S ribosomal protein L21 3155596 rplU 5323883 rplU Sinorhizobium medicae WSM419 50S ribosomal protein L21 YP_001328667.1 3155222 D 366394 CDS YP_001328668.1 150398201 5323884 3155630..3155899 1 NC_009636.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3155899 rpmA 5323884 rpmA Sinorhizobium medicae WSM419 50S ribosomal protein L27 YP_001328668.1 3155630 D 366394 CDS YP_001328669.1 150398202 5323885 3156011..3156676 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc03773 hypothetical protein; N-acetyltransferase GCN5 3156676 5323885 Smed_3007 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328669.1 3156011 D 366394 CDS YP_001328670.1 150398203 5323886 3156673..3157275 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc03774 hypothetical protein; N-acetyltransferase GCN5 3157275 5323886 Smed_3008 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328670.1 3156673 D 366394 CDS YP_001328671.1 150398204 5323887 3157393..3158403 1 NC_009636.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3158403 obgE 5323887 obgE Sinorhizobium medicae WSM419 GTPase ObgE YP_001328671.1 3157393 D 366394 CDS YP_001328672.1 150398205 5323888 3158406..3159587 1 NC_009636.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3159587 5323888 Smed_3010 Sinorhizobium medicae WSM419 gamma-glutamyl kinase YP_001328672.1 3158406 D 366394 CDS YP_001328673.1 150398206 5323889 3159580..3160863 1 NC_009636.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3160863 proA 5323889 proA Sinorhizobium medicae WSM419 gamma-glutamyl phosphate reductase YP_001328673.1 3159580 D 366394 CDS YP_001328674.1 150398207 5323890 3160878..3161486 1 NC_009636.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 3161486 nadD 5323890 nadD Sinorhizobium medicae WSM419 nicotinic acid mononucleotide adenylyltransferase YP_001328674.1 3160878 D 366394 CDS YP_001328675.1 150398208 5323891 3161588..3162088 1 NC_009636.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: sme:SMc03780 hypothetical protein; iojap family protein 3162088 5323891 Smed_3013 Sinorhizobium medicae WSM419 iojap family protein YP_001328675.1 3161588 D 366394 CDS YP_001328676.1 150398209 5323892 3162247..3162729 1 NC_009636.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3162729 5323892 Smed_3014 Sinorhizobium medicae WSM419 rRNA large subunit methyltransferase YP_001328676.1 3162247 D 366394 CDS YP_001328677.1 150398210 5323893 3162955..3164391 1 NC_009636.1 PFAM: peptidase M23B; KEGG: sme:SMc03782 hypothetical signal peptide protein; peptidase M23B 3164391 5323893 Smed_3015 Sinorhizobium medicae WSM419 peptidase M23B YP_001328677.1 3162955 D 366394 CDS YP_001328678.1 150398211 5323894 3164381..3165703 1 NC_009636.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: sme:SMc03783 putative carboxy-terminal processing protease precursor signal peptide protein; carboxyl-terminal protease 3165703 5323894 Smed_3016 Sinorhizobium medicae WSM419 carboxyl-terminal protease YP_001328678.1 3164381 D 366394 CDS YP_001328679.1 150398212 5323895 3165866..3167065 1 NC_009636.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: sme:SMc03784 hypothetical protein; hypothetical protein 3167065 5323895 Smed_3017 Sinorhizobium medicae WSM419 hypothetical protein YP_001328679.1 3165866 D 366394 CDS YP_001328680.1 150398213 5323896 3167408..3167935 1 NC_009636.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 3167935 5323896 Smed_3018 Sinorhizobium medicae WSM419 dinucleoside polyphosphate hydrolase YP_001328680.1 3167408 D 366394 CDS YP_001328681.1 150398214 5323897 complement(3168076..3168561) 1 NC_009636.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: sme:SMc03786 probable bacterioferritin (BFR) (cytochrome B-1) (cytochrome B-557) protein; bacterioferritin 3168561 5323897 Smed_3019 Sinorhizobium medicae WSM419 bacterioferritin YP_001328681.1 3168076 R 366394 CDS YP_001328682.1 150398215 5323898 complement(3168527..3168838) 1 NC_009636.1 KEGG: sme:SMc03787 hypothetical protein; hypothetical protein 3168838 5323898 Smed_3020 Sinorhizobium medicae WSM419 hypothetical protein YP_001328682.1 3168527 R 366394 CDS YP_001328683.1 150398216 5323899 complement(3169083..3172433) 1 NC_009636.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; KEGG: sme:SMc03788 putative DNA polymerase III alpha chain protein; DNA polymerase III subunit alpha 3172433 5323899 Smed_3021 Sinorhizobium medicae WSM419 DNA polymerase III subunit alpha YP_001328683.1 3169083 R 366394 CDS YP_001328684.1 150398217 5323900 complement(3172430..3173845) 1 NC_009636.1 KEGG: sme:SMc03789 hypothetical protein; hypothetical protein 3173845 5323900 Smed_3022 Sinorhizobium medicae WSM419 hypothetical protein YP_001328684.1 3172430 R 366394 CDS YP_001328685.1 150398218 5323901 complement(3173886..3174842) 1 NC_009636.1 KEGG: sme:SMc03790 hypothetical protein; hypothetical protein 3174842 5323901 Smed_3023 Sinorhizobium medicae WSM419 hypothetical protein YP_001328685.1 3173886 R 366394 CDS YP_001328686.1 150398219 5323902 3175010..3175444 1 NC_009636.1 PFAM: protein of unknown function DUF1025; KEGG: sme:SMc03791 hypothetical protein; hypothetical protein 3175444 5323902 Smed_3024 Sinorhizobium medicae WSM419 hypothetical protein YP_001328686.1 3175010 D 366394 CDS YP_001328687.1 150398220 5323903 complement(3175633..3175839) 1 NC_009636.1 KEGG: sme:SMc03792 hypothetical protein; hypothetical protein 3175839 5323903 Smed_3025 Sinorhizobium medicae WSM419 hypothetical protein YP_001328687.1 3175633 R 366394 CDS YP_001328688.1 150398221 5323904 complement(3175836..3176741) 1 NC_009636.1 PFAM: HpcH/HpaI aldolase; KEGG: sme:SMc03793 probable citrate lyase beta chain (citrase) (citryl-CoA lyase subunit) protein; citrate (pro-3S)-lyase 3176741 5323904 Smed_3026 Sinorhizobium medicae WSM419 citrate (pro-3S)-lyase YP_001328688.1 3175836 R 366394 CDS YP_001328689.1 150398222 5323905 3176884..3177138 1 NC_009636.1 KEGG: sme:SMc03794 hypothetical/unknown transmembrane protein; hypothetical protein 3177138 5323905 Smed_3027 Sinorhizobium medicae WSM419 hypothetical protein YP_001328689.1 3176884 D 366394 CDS YP_001328690.1 150398223 5323906 3177289..3177894 1 NC_009636.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 3177894 leuD 5323906 leuD Sinorhizobium medicae WSM419 isopropylmalate isomerase small subunit YP_001328690.1 3177289 D 366394 CDS YP_001328691.1 150398224 5323907 3177903..3178283 1 NC_009636.1 PFAM: Endoribonuclease L-PSP; KEGG: sme:SMc03796 hypothetical protein; endoribonuclease L-PSP 3178283 5323907 Smed_3029 Sinorhizobium medicae WSM419 endoribonuclease L-PSP YP_001328691.1 3177903 D 366394 CDS YP_001328692.1 150398225 5323908 3178464..3179435 1 NC_009636.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 3179435 5323908 Smed_3030 Sinorhizobium medicae WSM419 homoserine O-succinyltransferase YP_001328692.1 3178464 D 366394 CDS YP_001328693.1 150398226 5323909 3179518..3180534 1 NC_009636.1 PFAM: Aldose 1-epimerase; KEGG: sme:SMc03798 probable aldose 1-epimerase protein; aldose 1-epimerase 3180534 5323909 Smed_3031 Sinorhizobium medicae WSM419 aldose 1-epimerase YP_001328693.1 3179518 D 366394 CDS YP_001328694.1 150398227 5323911 complement(3181778..3182533) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsp:RSP_2371 3-oxoacyl-(acyl-carrier protein) reductase / short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3182533 5323911 Smed_3033 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328694.1 3181778 R 366394 CDS YP_001328695.1 150398228 5323912 complement(3182547..3183317) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dge:Dgeo_2865 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3183317 5323912 Smed_3034 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328695.1 3182547 R 366394 CDS YP_001328696.1 150398229 5323913 complement(3183314..3184822) 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: pac:PPA2321 sugar kinase, putative xylulose kinase; carbohydrate kinase FGGY 3184822 5323913 Smed_3035 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328696.1 3183314 R 366394 CDS YP_001328697.1 150398230 5323914 complement(3184858..3185193) 1 NC_009636.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sil:SPO3789 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein; alkylhydroperoxidase 3185193 5323914 Smed_3036 Sinorhizobium medicae WSM419 alkylhydroperoxidase YP_001328697.1 3184858 R 366394 CDS YP_001328698.1 150398231 5323915 complement(3185190..3186503) 1 NC_009636.1 PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: vei:Veis_2228 alpha/beta hydrolase fold; branched-chain alpha-keto acid dehydrogenase subunit E2 3186503 5323915 Smed_3037 Sinorhizobium medicae WSM419 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001328698.1 3185190 R 366394 CDS YP_001328699.1 150398232 5323916 complement(3186500..3187477) 1 NC_009636.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: gsu:GSU2436 dehydrogenase complex, E1 component, beta subunit; transketolase central region 3187477 5323916 Smed_3038 Sinorhizobium medicae WSM419 transketolase central region YP_001328699.1 3186500 R 366394 CDS YP_001328700.1 150398233 5323917 complement(3187474..3188502) 1 NC_009636.1 PFAM: dehydrogenase E1 component; KEGG: tte:TTE0186 Thiamine pyrophosphate-dependent dehydrogenases, E1 component alpha subunit; dehydrogenase E1 component 3188502 5323917 Smed_3039 Sinorhizobium medicae WSM419 dehydrogenase E1 component YP_001328700.1 3187474 R 366394 CDS YP_001328701.1 150398234 5323918 complement(3188487..3189533) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: vfi:VF1446 ribose transport system permease protein RbsC; monosaccharide-transporting ATPase 3189533 5323918 Smed_3040 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328701.1 3188487 R 366394 CDS YP_001328702.1 150398235 5323919 complement(3189530..3191077) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hch:HCH_02469 ABC-type sugar transport system, ATPase component; ABC transporter-like protein 3191077 5323919 Smed_3041 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328702.1 3189530 R 366394 CDS YP_001328703.1 150398236 5323920 complement(3191144..3192091) 1 NC_009636.1 KEGG: jan:Jann_2406 periplasmic binding protein/LacI transcriptional regulator; sugar ABC transporter periplasmic protein 3192091 5323920 Smed_3042 Sinorhizobium medicae WSM419 sugar ABC transporter periplasmic protein YP_001328703.1 3191144 R 366394 CDS YP_001328704.1 150398237 5323921 3192219..3193196 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: vei:Veis_2010 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 3193196 5323921 Smed_3043 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328704.1 3192219 D 366394 CDS YP_001328705.1 150398238 5323923 3193751..3194260 1 NC_009636.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc03800 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 3194260 5323923 Smed_3044 Sinorhizobium medicae WSM419 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001328705.1 3193751 D 366394 CDS YP_001328706.1 150398239 5323924 3194321..3195313 1 NC_009636.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sme:SMc03801 putative thioredoxin protein; thioredoxin 3195313 5323924 Smed_3045 Sinorhizobium medicae WSM419 thioredoxin YP_001328706.1 3194321 D 366394 CDS YP_001328707.1 150398240 5323925 3195455..3196135 1 NC_009636.1 PFAM: peptidase S16 lon domain protein; KEGG: sme:SMc03802 hypothetical protein; peptidase S16 lon domain-containing protein 3196135 5323925 Smed_3046 Sinorhizobium medicae WSM419 peptidase S16 lon domain-containing protein YP_001328707.1 3195455 D 366394 CDS YP_001328708.1 150398241 5323926 3196143..3196331 1 NC_009636.1 PFAM: protein of unknown function DUF343; KEGG: sme:SMc03803 hypothetical protein; hypothetical protein 3196331 5323926 Smed_3047 Sinorhizobium medicae WSM419 hypothetical protein YP_001328708.1 3196143 D 366394 CDS YP_001328709.1 150398242 5323927 complement(3196379..3197593) 1 NC_009636.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sme:SMc03804 putative 2-octaprenyl-6-methoxyphenol hydroxylase; 2-octaprenyl-6-methoxyphenyl hydroxylase 3197593 5323927 Smed_3048 Sinorhizobium medicae WSM419 2-octaprenyl-6-methoxyphenyl hydroxylase YP_001328709.1 3196379 R 366394 CDS YP_001328710.1 150398243 5323928 3197678..3198562 1 NC_009636.1 TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: sme:SMc03805 probable acyl-CoA thioesterase II protein; acyl-CoA thioesterase II 3198562 5323928 Smed_3049 Sinorhizobium medicae WSM419 acyl-CoA thioesterase II YP_001328710.1 3197678 D 366394 CDS YP_001328711.1 150398244 5323929 3198799..3199137 1 NC_009636.1 PFAM: nitrogen regulatory protein P-II; KEGG: sme:SMc03806 probable nitrogen regulatory protein PII 2; nitrogen regulatory protein P-II 3199137 5323929 Smed_3050 Sinorhizobium medicae WSM419 nitrogen regulatory protein P-II YP_001328711.1 3198799 D 366394 CDS YP_001328712.1 150398245 5323930 3199165..3200520 1 NC_009636.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sme:SMc03807 probable ammonium transporter protein; ammonium transporter 3200520 5323930 Smed_3051 Sinorhizobium medicae WSM419 ammonium transporter YP_001328712.1 3199165 D 366394 CDS YP_001328713.1 150398246 5323931 3200862..3203534 1 NC_009636.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: sme:SMc03808 putative cell division transmembrane protein; cell division protein FtsK 3203534 5323931 Smed_3052 Sinorhizobium medicae WSM419 cell division protein FtsK YP_001328713.1 3200862 D 366394 CDS YP_001328714.1 150398247 5323932 3203650..3204312 1 NC_009636.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: sme:SMc03809 hypothetical protein; outer membrane lipoprotein carrier protein LolA 3204312 5323932 Smed_3053 Sinorhizobium medicae WSM419 outer membrane lipoprotein carrier protein LolA YP_001328714.1 3203650 D 366394 CDS YP_001328715.1 150398248 5323933 3204509..3205315 1 NC_009636.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sme:SMc03818 putative exodeoxyribonuclease III protein; exodeoxyribonuclease III 3205315 5323933 Smed_3054 Sinorhizobium medicae WSM419 exodeoxyribonuclease III YP_001328715.1 3204509 D 366394 CDS YP_001328716.1 150398249 5323934 complement(3205348..3205803) 1 NC_009636.1 PFAM: cyclic nucleotide-binding; KEGG: sme:SMc03819 hypothetical protein; cyclic nucleotide-binding protein 3205803 5323934 Smed_3055 Sinorhizobium medicae WSM419 cyclic nucleotide-binding protein YP_001328716.1 3205348 R 366394 CDS YP_001328717.1 150398250 5323935 complement(3205841..3206602) 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc03820 putative transcription regulator protein; two component transcriptional regulator 3206602 5323935 Smed_3056 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001328717.1 3205841 R 366394 CDS YP_001328718.1 150398251 5323936 3206770..3207318 1 NC_009636.1 KEGG: sme:SMc03821 hypothetical protein; hypothetical protein 3207318 5323936 Smed_3057 Sinorhizobium medicae WSM419 hypothetical protein YP_001328718.1 3206770 D 366394 CDS YP_001328719.1 150398252 5323937 complement(3207399..3207956) 1 NC_009636.1 PFAM: Phosphoglycerate mutase; KEGG: sme:SMc03822 hypothetical protein; putative phosphohistidine phosphatase SixA 3207956 5323937 Smed_3058 Sinorhizobium medicae WSM419 putative phosphohistidine phosphatase SixA YP_001328719.1 3207399 R 366394 CDS YP_001328720.1 150398253 5323938 complement(3208066..3209475) 1 NC_009636.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3209475 5323938 Smed_3059 Sinorhizobium medicae WSM419 isopropylmalate isomerase large subunit YP_001328720.1 3208066 R 366394 CDS YP_001328721.1 150398254 5323939 complement(3209553..3209705) 1 NC_009636.1 KEGG: mlo:mll4273 hypothetical protein; hypothetical protein 3209705 5323939 Smed_3060 Sinorhizobium medicae WSM419 hypothetical protein YP_001328721.1 3209553 R 366394 CDS YP_001328722.1 150398255 5323940 3209812..3210291 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc03824 putative transcription regulator protein; MarR family transcriptional regulator 3210291 5323940 Smed_3061 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001328722.1 3209812 D 366394 CDS YP_001328723.1 150398256 5323941 3210288..3211526 1 NC_009636.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc03825 putative transport protein; Bcr/CflA subfamily drug resistance transporter 3211526 5323941 Smed_3062 Sinorhizobium medicae WSM419 Bcr/CflA subfamily drug resistance transporter YP_001328723.1 3210288 D 366394 CDS YP_001328724.1 150398257 5323942 complement(3211578..3212795) 1 NC_009636.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3212795 5323942 Smed_3063 Sinorhizobium medicae WSM419 argininosuccinate synthase YP_001328724.1 3211578 R 366394 CDS YP_001328725.1 150398258 5323943 3212963..3213604 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc03827 putative amino acid efflux transmembrane protein; lysine exporter protein LysE/YggA 3213604 5323943 Smed_3064 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001328725.1 3212963 D 366394 CDS YP_001328726.1 150398259 5323944 complement(3213677..3214471) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03828 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3214471 5323944 Smed_3065 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328726.1 3213677 R 366394 CDS YP_001328727.1 150398260 5323945 complement(3214468..3215346) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc03829 putative transport system permease ABC transporter protein; inner-membrane translocator 3215346 5323945 Smed_3066 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328727.1 3214468 R 366394 CDS YP_001328728.1 150398261 5323946 complement(3215539..3216492) 1 NC_009636.1 PFAM: protein of unknown function DUF534; KEGG: sme:SMc03830 hypothetical protein; hypothetical protein 3216492 5323946 Smed_3067 Sinorhizobium medicae WSM419 hypothetical protein YP_001328728.1 3215539 R 366394 CDS YP_001328729.1 150398262 5323947 complement(3216694..3217935) 1 NC_009636.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: sme:SMc03831 hypothetical protein; radical SAM protein 3217935 5323947 Smed_3068 Sinorhizobium medicae WSM419 radical SAM protein YP_001328729.1 3216694 R 366394 CDS YP_001328730.1 150398263 5323948 complement(3218214..3218717) 1 NC_009636.1 KEGG: sme:SMc03832 conserved hypothetical signal peptide protein; putative signal peptide protein 3218717 5323948 Smed_3069 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328730.1 3218214 R 366394 CDS YP_001328731.1 150398264 5323949 complement(3219069..3219446) 1 NC_009636.1 PFAM: protein of unknown function DUF1232; KEGG: sme:SMc03833 hypothetical protein; hypothetical protein 3219446 5323949 Smed_3070 Sinorhizobium medicae WSM419 hypothetical protein YP_001328731.1 3219069 R 366394 CDS YP_001328732.1 150398265 5323950 complement(3219550..3219867) 1 NC_009636.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3219867 phhB 5323950 phhB Sinorhizobium medicae WSM419 pterin-4-alpha-carbinolamine dehydratase YP_001328732.1 3219550 R 366394 CDS YP_001328733.1 150398266 5323951 complement(3220102..3220689) 1 NC_009636.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: sme:SMc03835 putative 2'-5' RNA ligase protein; 2'-5' RNA ligase 3220689 5323951 Smed_3072 Sinorhizobium medicae WSM419 2'-5' RNA ligase YP_001328733.1 3220102 R 366394 CDS YP_001328734.1 150398267 5323952 complement(3220815..3221456) 1 NC_009636.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sme:SMc03836 putative acyl-CoA thioesterase I protein; GDSL family lipase 3221456 5323952 Smed_3073 Sinorhizobium medicae WSM419 GDSL family lipase YP_001328734.1 3220815 R 366394 CDS YP_001328735.1 150398268 5323953 3221528..3222247 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03837 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3222247 5323953 Smed_3074 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328735.1 3221528 D 366394 CDS YP_001328736.1 150398269 5323954 3222244..3224835 1 NC_009636.1 PFAM: protein of unknown function DUF214; KEGG: sme:SMc03838 hypothetical transmembrane protein; hypothetical protein 3224835 5323954 Smed_3075 Sinorhizobium medicae WSM419 hypothetical protein YP_001328736.1 3222244 D 366394 CDS YP_001328737.1 150398270 5323955 3225083..3225820 1 NC_009636.1 PFAM: protein of unknown function UPF0005; KEGG: sme:SMc03839 hypothetical transmembrane protein; hypothetical protein 3225820 5323955 Smed_3076 Sinorhizobium medicae WSM419 hypothetical protein YP_001328737.1 3225083 D 366394 CDS YP_001328738.1 150398271 5323956 3225916..3226473 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc03840 putative acetyltransferase (antibiotic resistance) protein; N-acetyltransferase GCN5 3226473 5323956 Smed_3077 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328738.1 3225916 D 366394 CDS YP_001328739.1 150398272 5323957 complement(3226503..3227120) 1 NC_009636.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3227120 clpP 5323957 clpP Sinorhizobium medicae WSM419 ATP-dependent Clp protease proteolytic subunit YP_001328739.1 3226503 R 366394 CDS YP_001328740.1 150398273 5323958 complement(3227156..3227506) 1 NC_009636.1 KEGG: sme:SMc03842 hypothetical protein; hypothetical protein 3227506 5323958 Smed_3079 Sinorhizobium medicae WSM419 hypothetical protein YP_001328740.1 3227156 R 366394 CDS YP_001328741.1 150398274 5323959 complement(3227503..3227817) 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: sme:SMc03843 putative transcription regulator protein; regulatory protein ArsR 3227817 5323959 Smed_3080 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001328741.1 3227503 R 366394 CDS YP_001328742.1 150398275 5323960 complement(3228016..3228426) 1 NC_009636.1 KEGG: sme:SMc03844 hypothetical protein; hypothetical protein 3228426 5323960 Smed_3081 Sinorhizobium medicae WSM419 hypothetical protein YP_001328742.1 3228016 R 366394 CDS YP_001328743.1 150398276 5323961 complement(3228754..3229542) 1 NC_009636.1 PFAM: protein of unknown function DUF1223; KEGG: sme:SMc03845 hypothetical protein; hypothetical protein 3229542 5323961 Smed_3082 Sinorhizobium medicae WSM419 hypothetical protein YP_001328743.1 3228754 R 366394 CDS YP_001328744.1 150398277 5323962 complement(3229730..3232420) 1 NC_009636.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 3232420 5323962 Smed_3083 Sinorhizobium medicae WSM419 aconitate hydratase YP_001328744.1 3229730 R 366394 CDS YP_001328745.1 150398278 5323963 3232691..3233314 1 NC_009636.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 3233314 5323963 Smed_3084 Sinorhizobium medicae WSM419 cytochrome c biogenesis protein CcmA YP_001328745.1 3232691 D 366394 CDS YP_001328746.1 150398279 5323964 3233311..3233970 1 NC_009636.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: sme:SMc03848 putative heme exporter B (cytochrome C-type biogenesis protein) transmembrane; heme exporter protein CcmB 3233970 5323964 Smed_3085 Sinorhizobium medicae WSM419 heme exporter protein CcmB YP_001328746.1 3233311 D 366394 CDS YP_001328747.1 150398280 5323965 3234027..3234797 1 NC_009636.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: sme:SMc03849 putative heme exporter C (cytochrome C-type biogenesis protein) transmembrane; heme exporter protein CcmC 3234797 5323965 Smed_3086 Sinorhizobium medicae WSM419 heme exporter protein CcmC YP_001328747.1 3234027 D 366394 CDS YP_001328748.1 150398281 5323966 3234794..3234970 1 NC_009636.1 PFAM: Heme exporter protein D (CcmD); KEGG: sme:SMc03850 putative heme exporter D (cytochrome c-type biogenesis protein) transmembrane; heme exporter protein CcmD 3234970 5323966 Smed_3087 Sinorhizobium medicae WSM419 heme exporter protein CcmD YP_001328748.1 3234794 D 366394 CDS YP_001328749.1 150398282 5323967 3234967..3235566 1 NC_009636.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sme:SMc03851 putative thiol:disulfide interchange protein (cytochrome C biogenesis protein); periplasmic protein thiol--disulfide oxidoreductase DsbE 3235566 5323967 Smed_3088 Sinorhizobium medicae WSM419 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001328749.1 3234967 D 366394 CDS YP_001328750.1 150398283 5323968 complement(3235570..3236160) 1 NC_009636.1 KEGG: sme:SMc03852 hypothetical protein; hypothetical protein 3236160 5323968 Smed_3089 Sinorhizobium medicae WSM419 hypothetical protein YP_001328750.1 3235570 R 366394 CDS YP_001328751.1 150398284 5323969 complement(3236157..3236789) 1 NC_009636.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 3236789 5323969 Smed_3090 Sinorhizobium medicae WSM419 intracellular septation protein A YP_001328751.1 3236157 R 366394 CDS YP_001328752.1 150398285 5323970 complement(3236887..3238449) 1 NC_009636.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: sme:SMc03854 putative cell division protein; signal recognition particle-docking protein FtsY 3238449 5323970 Smed_3091 Sinorhizobium medicae WSM419 signal recognition particle-docking protein FtsY YP_001328752.1 3236887 R 366394 CDS YP_001328753.1 150398286 5323971 complement(3238468..3239742) 1 NC_009636.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; KEGG: sme:SMc03855 hypothetical protein; MiaB-like tRNA modifying enzyme 3239742 5323971 Smed_3092 Sinorhizobium medicae WSM419 MiaB-like tRNA modifying enzyme YP_001328753.1 3238468 R 366394 CDS YP_001328754.1 150398287 5323972 complement(3239739..3240617) 1 NC_009636.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3240617 dapF 5323972 dapF Sinorhizobium medicae WSM419 diaminopimelate epimerase YP_001328754.1 3239739 R 366394 CDS YP_001328755.1 150398288 5323973 complement(3240738..3241751) 1 NC_009636.1 KEGG: atc:AGR_C_4888 hypothetical protein; hypothetical protein 3241751 5323973 Smed_3094 Sinorhizobium medicae WSM419 hypothetical protein YP_001328755.1 3240738 R 366394 CDS YP_001328756.1 150398289 5323974 3242073..3243617 1 NC_009636.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: sme:SMc03857 probable signal recognition particle protein (fifty-four homolog); signal recognition particle protein 3243617 5323974 Smed_3095 Sinorhizobium medicae WSM419 signal recognition particle protein YP_001328756.1 3242073 D 366394 CDS YP_001328757.1 150398290 5323975 3243630..3243965 1 NC_009636.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 3243965 5323975 Smed_3096 Sinorhizobium medicae WSM419 chorismate mutase YP_001328757.1 3243630 D 366394 CDS YP_001328758.1 150398291 5323976 3244004..3244378 1 NC_009636.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3244378 rpsP 5323976 rpsP Sinorhizobium medicae WSM419 30S ribosomal protein S16 YP_001328758.1 3244004 D 366394 CDS YP_001328759.1 150398292 5323977 3244455..3245075 1 NC_009636.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3245075 rimM 5323977 rimM Sinorhizobium medicae WSM419 16S rRNA-processing protein RimM YP_001328759.1 3244455 D 366394 CDS YP_001328760.1 150398293 5323978 3245086..3245808 1 NC_009636.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3245808 trmD 5323978 trmD Sinorhizobium medicae WSM419 tRNA (guanine-N(1)-)-methyltransferase YP_001328760.1 3245086 D 366394 CDS YP_001328761.1 150398294 5323979 complement(3245790..3246536) 1 NC_009636.1 PFAM: protein of unknown function DUF81; KEGG: sme:SMc03862 hypothetical transmembrane protein; hypothetical protein 3246536 5323979 Smed_3100 Sinorhizobium medicae WSM419 hypothetical protein YP_001328761.1 3245790 R 366394 CDS YP_001328762.1 150398295 5323980 3246849..3247382 1 NC_009636.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3247382 rplS 5323980 rplS Sinorhizobium medicae WSM419 50S ribosomal protein L19 YP_001328762.1 3246849 D 366394 CDS YP_001328763.1 150398296 5323981 3247507..3248316 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: sme:SMc03864 putative amino acid-binding periplasmic (signal peptide) ABC transporter protein; extracellular solute-binding protein 3248316 5323981 Smed_3102 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328763.1 3247507 D 366394 CDS YP_001328764.1 150398297 5323982 3248385..3249209 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03865 putative amino-acid transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 3249209 5323982 Smed_3103 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001328764.1 3248385 D 366394 CDS YP_001328765.1 150398298 5323983 complement(3249478..3251304) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03866 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3251304 5323983 Smed_3104 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328765.1 3249478 R 366394 CDS YP_001328766.1 150398299 5323984 complement(3251309..3251971) 1 NC_009636.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: sme:SMc03867 hypothetical protein; thiamine pyrophosphokinase 3251971 5323984 Smed_3105 Sinorhizobium medicae WSM419 thiamine pyrophosphokinase YP_001328766.1 3251309 R 366394 CDS YP_001328767.1 150398300 5323985 complement(3252036..3252521) 1 NC_009636.1 KEGG: sme:SMc03868 hypothetical protein; hypothetical protein 3252521 5323985 Smed_3106 Sinorhizobium medicae WSM419 hypothetical protein YP_001328767.1 3252036 R 366394 CDS YP_001328768.1 150398301 5323986 3252828..3253856 1 NC_009636.1 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 3253856 tbpA 5323986 tbpA Sinorhizobium medicae WSM419 thiamine transporter substrate binding subunit YP_001328768.1 3252828 D 366394 CDS YP_001328769.1 150398302 5323987 3253909..3255504 1 NC_009636.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 3255504 thiP 5323987 thiP Sinorhizobium medicae WSM419 thiamine transporter membrane protein YP_001328769.1 3253909 D 366394 CDS YP_001328770.1 150398303 5323988 3255501..3256208 1 NC_009636.1 TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03871 putative ATP-binding ABC transporter protein; ABC transporter ATP-binding protein 3256208 5323988 Smed_3109 Sinorhizobium medicae WSM419 ABC transporter ATP-binding protein YP_001328770.1 3255501 D 366394 CDS YP_001328771.1 150398304 5323989 3256627..3258138 1 NC_009636.1 PFAM: peptidase M48 Ste24p; KEGG: sme:SMc03872 hypothetical protein; peptidase M48 Ste24p 3258138 5323989 Smed_3110 Sinorhizobium medicae WSM419 peptidase M48 Ste24p YP_001328771.1 3256627 D 366394 CDS YP_001328772.1 150398305 5323990 complement(3258437..3259303) 1 NC_009636.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production; RNA polymerase factor sigma-32 3259303 rpoH2 5323990 rpoH2 Sinorhizobium medicae WSM419 RNA polymerase factor sigma-32 YP_001328772.1 3258437 R 366394 CDS YP_001328773.1 150398306 5323991 complement(3259740..3260309) 1 NC_009636.1 PFAM: transcription factor CarD; KEGG: sme:SMc03874 CarD family transcriptional regulator; CarD family transcriptional regulator 3260309 5323991 Smed_3112 Sinorhizobium medicae WSM419 CarD family transcriptional regulator YP_001328773.1 3259740 R 366394 CDS YP_001328774.1 150398307 5323992 complement(3260717..3261055) 1 NC_009636.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMc03875 putative ferredoxin protein; 4Fe-4S ferredoxin 3261055 5323992 Smed_3113 Sinorhizobium medicae WSM419 4Fe-4S ferredoxin YP_001328774.1 3260717 R 366394 CDS YP_001328775.1 150398308 5323993 complement(3261454..3261867) 1 NC_009636.1 PFAM: RNA-binding S4 domain protein; KEGG: sme:SMc03876 hypothetical heat shock-like protein; RNA-binding S4 domain-containing protein 3261867 5323993 Smed_3114 Sinorhizobium medicae WSM419 RNA-binding S4 domain-containing protein YP_001328775.1 3261454 R 366394 CDS YP_001328776.1 150398309 5323994 complement(3261877..3264957) 1 NC_009636.1 PFAM: helicase domain protein; KEGG: sme:SMc03877 hypothetical protein; helicase domain-containing protein 3264957 5323994 Smed_3115 Sinorhizobium medicae WSM419 helicase domain-containing protein YP_001328776.1 3261877 R 366394 CDS YP_001328777.1 150398310 5323995 complement(3265713..3266438) 1 NC_009636.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc03878 acetoacetyl-CoA reductase protein; acetoacetyl-CoA reductase 3266438 5323995 Smed_3116 Sinorhizobium medicae WSM419 acetoacetyl-CoA reductase YP_001328777.1 3265713 R 366394 CDS YP_001328778.1 150398311 5323996 complement(3266553..3267734) 1 NC_009636.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 3267734 5323996 Smed_3117 Sinorhizobium medicae WSM419 acetyl-CoA acetyltransferase YP_001328778.1 3266553 R 366394 CDS YP_001328779.1 150398312 5323997 3267957..3268535 1 NC_009636.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: sme:SMc03880 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR 3268535 5323997 Smed_3118 Sinorhizobium medicae WSM419 polyhydroxyalkonate synthesis repressor PhaR YP_001328779.1 3267957 D 366394 CDS YP_001328780.1 150398313 5323998 complement(3268617..3268802) 1 NC_009636.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3268802 rpmF 5323998 rpmF Sinorhizobium medicae WSM419 50S ribosomal protein L32 YP_001328780.1 3268617 R 366394 CDS YP_001328781.1 150398314 5323999 complement(3268940..3269587) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc03882 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3269587 5323999 Smed_3120 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001328781.1 3268940 R 366394 CDS YP_001328782.1 150398315 5324000 complement(3269666..3270454) 1 NC_009636.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3270454 mtgA 5324000 mtgA Sinorhizobium medicae WSM419 monofunctional biosynthetic peptidoglycan transglycosylase YP_001328782.1 3269666 R 366394 CDS YP_001328783.1 150398316 5324001 3270606..3271520 1 NC_009636.1 PFAM: Polyprenyl synthetase; KEGG: sme:SMc03884 probable geranyltranstransferase protein; polyprenyl synthetase 3271520 5324001 Smed_3122 Sinorhizobium medicae WSM419 polyprenyl synthetase YP_001328783.1 3270606 D 366394 CDS YP_001328784.1 150398317 5324002 3271524..3272579 1 NC_009636.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3272579 5324002 Smed_3123 Sinorhizobium medicae WSM419 histidinol-phosphate aminotransferase YP_001328784.1 3271524 D 366394 CDS YP_001328785.1 150398318 5324003 complement(3272642..3273430) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_C_3482 short chain dehydrogenase; short chain dehydrogenase 3273430 5324003 Smed_3124 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001328785.1 3272642 R 366394 CDS YP_001328786.1 150398319 5324004 complement(3273447..3274934) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_3484 ribose ABC transporter (ATP-binding protein); ABC transporter-like protein 3274934 5324004 Smed_3125 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328786.1 3273447 R 366394 CDS YP_001328787.1 150398320 5324005 complement(3274961..3275893) 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_C_3486 bifunctional carbohydrate binding and transport protein; monosaccharide-transporting ATPase 3275893 5324005 Smed_3126 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328787.1 3274961 R 366394 CDS YP_001328788.1 150398321 5324006 complement(3276019..3276993) 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: atc:AGR_C_3488 bifunctional carbohydrate binding and transport protein; monosaccharide-transporting ATPase 3276993 5324006 Smed_3127 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328788.1 3276019 R 366394 CDS YP_001328789.1 150398322 5324007 3277164..3278009 1 NC_009636.1 PFAM: Transketolase domain protein; KEGG: rle:RL2719 putative ferredoxin; transketolase domain-containing protein 3278009 5324007 Smed_3128 Sinorhizobium medicae WSM419 transketolase domain-containing protein YP_001328789.1 3277164 D 366394 CDS YP_001328790.1 150398323 5324008 3278009..3278977 1 NC_009636.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: ret:RHE_CH02397 transketolase C-terminal subunit protein; transketolase domain-containing protein 3278977 5324008 Smed_3129 Sinorhizobium medicae WSM419 transketolase domain-containing protein YP_001328790.1 3278009 D 366394 CDS YP_001328791.1 150398324 5324009 3279052..3280521 1 NC_009636.1 PFAM: carbohydrate kinase FGGY; KEGG: atc:AGR_C_3493 glycerol kinase; carbohydrate kinase FGGY 3280521 5324009 Smed_3130 Sinorhizobium medicae WSM419 carbohydrate kinase FGGY YP_001328791.1 3279052 D 366394 CDS YP_001328792.1 150398325 5324010 3280545..3281495 1 NC_009636.1 PFAM: putative sugar-binding domain protein; KEGG: ret:RHE_CH02395 probable transcriptional regulator protein; DeoR family transcriptional regulator 3281495 5324010 Smed_3131 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328792.1 3280545 D 366394 CDS YP_001328793.1 150398326 5324011 3281541..3282326 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: atc:AGR_C_3496 hypothetical protein; short-chain dehydrogenase/reductase SDR 3282326 5324011 Smed_3132 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001328793.1 3281541 D 366394 CDS YP_001328794.1 150398327 5324012 complement(3282410..3283663) 1 NC_009636.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3283663 ispG 5324012 ispG Sinorhizobium medicae WSM419 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001328794.1 3282410 R 366394 CDS YP_001328795.1 150398328 5324013 complement(3283841..3285031) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc03889 putative transport protein; major facilitator superfamily transporter 3285031 5324013 Smed_3134 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001328795.1 3283841 R 366394 CDS YP_001328796.1 150398329 5324014 complement(3285139..3285936) 1 NC_009636.1 PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: sme:SMc03890 putative transcription regulator protein; DeoR family transcriptional regulator 3285936 5324014 Smed_3135 Sinorhizobium medicae WSM419 DeoR family transcriptional regulator YP_001328796.1 3285139 R 366394 CDS YP_001328797.1 150398330 5324015 3286188..3286961 1 NC_009636.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc03891 putative amino acid-binding periplasmic ABC transporter protein; extracellular solute-binding protein 3286961 5324015 Smed_3136 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328797.1 3286188 D 366394 CDS YP_001328798.1 150398331 5324016 3287104..3287784 1 NC_009636.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03893 putative amino-acid transport system permease ABC transporter protein; polar amino acid ABC transporter inner membrane subunit 3287784 5324016 Smed_3137 Sinorhizobium medicae WSM419 polar amino acid ABC transporter inner membrane subunit YP_001328798.1 3287104 D 366394 CDS YP_001328799.1 150398332 5324017 3287781..3288542 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03894 putative amino-acid ABC transporter ATP-binding protein; ABC transporter-like protein 3288542 5324017 Smed_3138 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328799.1 3287781 D 366394 CDS YP_001328800.1 150398333 5324018 complement(3288619..3292173) 1 NC_009636.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 3292173 5324018 Smed_3139 Sinorhizobium medicae WSM419 pyruvate carboxylase YP_001328800.1 3288619 R 366394 CDS YP_001328801.1 150398334 5324019 complement(3292227..3292967) 1 NC_009636.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sme:SMc03896 putative transcription regulator protein; regulatory protein LuxR 3292967 5324019 Smed_3140 Sinorhizobium medicae WSM419 regulatory protein LuxR YP_001328801.1 3292227 R 366394 CDS YP_001328802.1 150398335 5324020 complement(3293135..3293296) 1 NC_009636.1 hypothetical protein 3293296 5324020 Smed_3141 Sinorhizobium medicae WSM419 hypothetical protein YP_001328802.1 3293135 R 366394 CDS YP_001328803.1 150398336 5324021 3293350..3295107 1 NC_009636.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 3295107 5324021 Smed_3142 Sinorhizobium medicae WSM419 cyclic beta-1,2-glucan ABc transporter YP_001328803.1 3293350 D 366394 CDS YP_001328804.1 150398337 5324024 3295999..3296661 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2210 transcriptional regulator, GntR family; GntR family transcriptional regulator 3296661 5324024 Smed_3145 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328804.1 3295999 D 366394 CDS YP_001328805.1 150398338 5324025 3296658..3298127 1 NC_009636.1 PFAM: sulfatase; KEGG: ppu:PP_0077 choline sulfatase; sulfatase 3298127 5324025 Smed_3146 Sinorhizobium medicae WSM419 sulfatase YP_001328805.1 3296658 D 366394 CDS YP_001328806.1 150398339 5324026 3298164..3299198 1 NC_009636.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; KEGG: bsu:BG10656 aliphatic sulfonates transport system substrate-binding protein; aliphatic sulfonates ABC transporter substrate-binding protein 3299198 5324026 Smed_3147 Sinorhizobium medicae WSM419 aliphatic sulfonates ABC transporter substrate-binding protein YP_001328806.1 3298164 D 366394 CDS YP_001328807.1 150398340 5324027 3299209..3300009 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA0063 sulfonate ABC transporter, ATP-binding protein; ABC transporter-like protein 3300009 5324027 Smed_3148 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328807.1 3299209 D 366394 CDS YP_001328808.1 150398341 5324028 3300006..3300332 1 NC_009636.1 hypothetical protein 3300332 5324028 Smed_3149 Sinorhizobium medicae WSM419 hypothetical protein YP_001328808.1 3300006 D 366394 CDS YP_001328809.1 150398342 5324029 3300329..3301150 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mta:Moth_1974 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3301150 5324029 Smed_3150 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328809.1 3300329 D 366394 CDS YP_001328810.1 150398343 5324030 3301147..3301938 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pst:PSPTO_5321 taurine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 3301938 5324030 Smed_3151 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328810.1 3301147 D 366394 CDS YP_001328811.1 150398344 5324031 3301935..3302834 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sma:SAV7284 oxidoreductase; pyridoxal 4-dehydrogenase 3302834 5324031 Smed_3152 Sinorhizobium medicae WSM419 pyridoxal 4-dehydrogenase YP_001328811.1 3301935 D 366394 CDS YP_001328812.1 150398345 5324032 3302831..3303676 1 NC_009636.1 PFAM: amidohydrolase 2; KEGG: pol:Bpro_2213 amidohydrolase 2; amidohydrolase 2 3303676 5324032 Smed_3153 Sinorhizobium medicae WSM419 amidohydrolase 2 YP_001328812.1 3302831 D 366394 CDS YP_001328813.1 150398346 5324033 complement(3304167..3305324) 1 NC_009636.1 KEGG: sme:SMc04381 hypothetical protein; hypothetical protein 3305324 5324033 Smed_3154 Sinorhizobium medicae WSM419 hypothetical protein YP_001328813.1 3304167 R 366394 CDS YP_001328814.1 150398347 5324034 complement(3305503..3314115) 1 NC_009636.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: sme:SMc04382 beta-(1,2)-glucan production associated transmembrane protein; glycosyltransferase 3314115 5324034 Smed_3155 Sinorhizobium medicae WSM419 glycosyltransferase YP_001328814.1 3305503 R 366394 CDS YP_001328815.1 150398348 5324035 complement(3314459..3315352) 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04882 probable transcription regulator protein; LysR family transcriptional regulator 3315352 5324035 Smed_3156 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001328815.1 3314459 R 366394 CDS YP_001328816.1 150398349 5324036 3315466..3316884 1 NC_009636.1 PFAM: protein of unknown function DUF1338; KEGG: sme:SMc04383 hypothetical protein; hypothetical protein 3316884 5324036 Smed_3157 Sinorhizobium medicae WSM419 hypothetical protein YP_001328816.1 3315466 D 366394 CDS YP_001328817.1 150398350 5324037 3316895..3318316 1 NC_009636.1 PFAM: FAD linked oxidase domain protein; KEGG: sme:SMc04384 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 3318316 5324037 Smed_3158 Sinorhizobium medicae WSM419 FAD linked oxidase domain-containing protein YP_001328817.1 3316895 D 366394 CDS YP_001328818.1 150398351 5324038 3318346..3319878 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMc04385 putative aldehyde dehydrogenase transmembrane protein; aldehyde dehydrogenase 3319878 5324038 Smed_3159 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001328818.1 3318346 D 366394 CDS YP_001328819.1 150398352 5324039 3319895..3321127 1 NC_009636.1 PFAM: aminotransferase class I and II; KEGG: sme:SMc04386 aspartate aminotransferase B protein; class I and II aminotransferase 3321127 5324039 Smed_3160 Sinorhizobium medicae WSM419 class I and II aminotransferase YP_001328819.1 3319895 D 366394 CDS YP_001328820.1 150398353 5324040 complement(3321247..3321795) 1 NC_009636.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sme:SMc04387 putative aldehyde dehydrogenase protein; XRE family transcriptional regulator 3321795 5324040 Smed_3161 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001328820.1 3321247 R 366394 CDS YP_001328821.1 150398354 5324041 3321941..3323278 1 NC_009636.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 3323278 5324041 Smed_3162 Sinorhizobium medicae WSM419 beta alanine--pyruvate transaminase YP_001328821.1 3321941 D 366394 CDS YP_001328822.1 150398355 5324042 complement(3323368..3324639) 1 NC_009636.1 PFAM: MOFRL domain protein; KEGG: sme:SMc04389 putative hydroxypyruvate reductase protein; hydroxypyruvate reductase 3324639 5324042 Smed_3163 Sinorhizobium medicae WSM419 hydroxypyruvate reductase YP_001328822.1 3323368 R 366394 CDS YP_001328823.1 150398356 5324043 complement(3324751..3326406) 1 NC_009636.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: sme:SMc04390 putative L-sorbose dehydrogenase, FAD dependent protein; choline dehydrogenase 3326406 5324043 Smed_3164 Sinorhizobium medicae WSM419 choline dehydrogenase YP_001328823.1 3324751 R 366394 CDS YP_001328824.1 150398357 5324044 complement(3326566..3327339) 1 NC_009636.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3327339 5324044 Smed_3165 Sinorhizobium medicae WSM419 3-ketoacyl-ACP reductase YP_001328824.1 3326566 R 366394 CDS YP_001328825.1 150398358 5324045 complement(3327336..3328856) 1 NC_009636.1 KEGG: sme:SMc04392 putative dehydrogenase transmembrane protein; dehydrogenase 3328856 5324045 Smed_3166 Sinorhizobium medicae WSM419 dehydrogenase YP_001328825.1 3327336 R 366394 CDS YP_001328826.1 150398359 5324046 complement(3328853..3329965) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04393 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3329965 5324046 Smed_3167 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328826.1 3328853 R 366394 CDS YP_001328827.1 150398360 5324047 complement(3329970..3330851) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04394 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3330851 5324047 Smed_3168 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328827.1 3329970 R 366394 CDS YP_001328828.1 150398361 5324048 complement(3330851..3331729) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04395 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3331729 5324048 Smed_3169 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328828.1 3330851 R 366394 CDS YP_001328829.1 150398362 5324049 complement(3331901..3333145) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04396 putative periplasmic binding protein; extracellular solute-binding protein 3333145 5324049 Smed_3170 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328829.1 3331901 R 366394 CDS YP_001328830.1 150398363 5324050 complement(3333287..3334795) 1 NC_009636.1 PFAM: aldehyde dehydrogenase; KEGG: sme:SMc04397 putative L-sorbosone dehydrogenase, NADP dependent protein; aldehyde dehydrogenase 3334795 5324050 Smed_3171 Sinorhizobium medicae WSM419 aldehyde dehydrogenase YP_001328830.1 3333287 R 366394 CDS YP_001328831.1 150398364 5324051 complement(3334795..3335574) 1 NC_009636.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc04398 putative enoyl-CoA hydratase protein; enoyl-CoA hydratase/isomerase 3335574 5324051 Smed_3172 Sinorhizobium medicae WSM419 enoyl-CoA hydratase/isomerase YP_001328831.1 3334795 R 366394 CDS YP_001328832.1 150398365 5324052 complement(3335567..3337186) 1 NC_009636.1 PFAM: coenzyme A transferase; KEGG: sme:SMc04399 putative acyl-CoA transferase protein; coenzyme A transferase 3337186 5324052 Smed_3173 Sinorhizobium medicae WSM419 coenzyme A transferase YP_001328832.1 3335567 R 366394 CDS YP_001328833.1 150398366 5324053 complement(3337191..3338192) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc04400 putative oxidoreductase protein; oxidoreductase domain-containing protein 3338192 5324053 Smed_3174 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328833.1 3337191 R 366394 CDS YP_001328834.1 150398367 5324054 complement(3338189..3339232) 1 NC_009636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMc04401 putative transcription regulator protein; periplasmic binding protein/LacI transcriptional regulator 3339232 5324054 Smed_3175 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001328834.1 3338189 R 366394 CDS YP_001328835.1 150398368 5324055 3339534..3340703 1 NC_009636.1 PFAM: protein of unknown function DUF993; KEGG: sme:SMc04402 hypothetical protein; hypothetical protein 3340703 5324055 Smed_3176 Sinorhizobium medicae WSM419 hypothetical protein YP_001328835.1 3339534 D 366394 CDS YP_001328836.1 150398369 5324056 complement(3340859..3342922) 1 NC_009636.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sme:SMc04403 probable peptidyl-dipeptidase A protein; peptidyl-dipeptidase Dcp 3342922 5324056 Smed_3177 Sinorhizobium medicae WSM419 peptidyl-dipeptidase Dcp YP_001328836.1 3340859 R 366394 CDS YP_001328837.1 150398370 5324057 3343230..3344342 1 NC_009636.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 3344342 5324057 Smed_3178 Sinorhizobium medicae WSM419 3-isopropylmalate dehydrogenase YP_001328837.1 3343230 D 366394 CDS YP_001328838.1 150398371 5324058 3344467..3345159 1 NC_009636.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sme:SMc04406 hypothetical protein; PA-phosphatase-like phosphoesterase 3345159 5324058 Smed_3179 Sinorhizobium medicae WSM419 PA-phosphatase-like phosphoesterase YP_001328838.1 3344467 D 366394 CDS YP_001328839.1 150398372 5324059 complement(3345216..3347105) 1 NC_009636.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sme:SMc04407 putative transport transmembrane protein; major facilitator superfamily transporter 3347105 5324059 Smed_3180 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001328839.1 3345216 R 366394 CDS YP_001328840.1 150398373 5324060 3347400..3347570 1 NC_009636.1 KEGG: sme:SMc04409 hypothetical protein; hypothetical protein 3347570 5324060 Smed_3181 Sinorhizobium medicae WSM419 hypothetical protein YP_001328840.1 3347400 D 366394 CDS YP_001328841.1 150398374 5324061 3347683..3348717 1 NC_009636.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 3348717 5324061 Smed_3182 Sinorhizobium medicae WSM419 aspartate-semialdehyde dehydrogenase YP_001328841.1 3347683 D 366394 CDS YP_001328842.1 150398375 5324062 3348875..3349696 1 NC_009636.1 TIGRFAM: lytic murein transglycosylase; KEGG: sme:SMc04411 putative membrane-bound lytic murein transglycosylase signal peptide protein; lytic murein transglycosylase 3349696 5324062 Smed_3183 Sinorhizobium medicae WSM419 lytic murein transglycosylase YP_001328842.1 3348875 D 366394 CDS YP_001328843.1 150398376 5324063 3349796..3350140 1 NC_009636.1 KEGG: nha:Nham_4172 ISSpo6, transposase orf A; hypothetical protein 3350140 5324063 Smed_3184 Sinorhizobium medicae WSM419 hypothetical protein YP_001328843.1 3349796 D 366394 CDS YP_001328844.1 150398377 5324064 complement(3350301..3350948) 1 NC_009636.1 PFAM: carbonic anhydrase; KEGG: sme:SMc04083 putative carbonic anhydrase protein; carbonate dehydratase 3350948 5324064 Smed_3185 Sinorhizobium medicae WSM419 carbonate dehydratase YP_001328844.1 3350301 R 366394 CDS YP_001328845.1 150398378 5324065 complement(3351145..3352026) 1 NC_009636.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 3352026 5324065 Smed_3186 Sinorhizobium medicae WSM419 pyridoxamine kinase YP_001328845.1 3351145 R 366394 CDS YP_001328846.1 150398379 5324066 3352309..3357096 1 NC_009636.1 PFAM: NAD-glutamate dehydrogenase; KEGG: sme:SMc04085 hypothetical protein; NAD-glutamate dehydrogenase 3357096 5324066 Smed_3187 Sinorhizobium medicae WSM419 NAD-glutamate dehydrogenase YP_001328846.1 3352309 D 366394 CDS YP_001328847.1 150398380 5324067 3357221..3358612 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc04087 putative transmembrane protein; major facilitator superfamily transporter 3358612 5324067 Smed_3188 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001328847.1 3357221 D 366394 CDS YP_001328848.1 150398381 5324068 complement(3358668..3360278) 1 NC_009636.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3360278 purH 5324068 purH Sinorhizobium medicae WSM419 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001328848.1 3358668 R 366394 CDS YP_001328849.1 150398382 5324069 complement(3360430..3362136) 1 NC_009636.1 PFAM: Heparinase II/III family protein; KEGG: sme:SMc04089 hypothetical protein; heparinase II/III family protein 3362136 5324069 Smed_3190 Sinorhizobium medicae WSM419 heparinase II/III family protein YP_001328849.1 3360430 R 366394 CDS YP_001328850.1 150398383 5324070 complement(3362382..3363794) 1 NC_009636.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sme:SMc04090 hypothetical SUN protein; Fmu (Sun) domain-containing protein 3363794 5324070 Smed_3191 Sinorhizobium medicae WSM419 Fmu (Sun) domain-containing protein YP_001328850.1 3362382 R 366394 CDS YP_001328851.1 150398384 5324071 complement(3363794..3364753) 1 NC_009636.1 putative metalloprotease; heat shock protein HtpX 3364753 5324071 Smed_3192 Sinorhizobium medicae WSM419 heat shock protein HtpX YP_001328851.1 3363794 R 366394 CDS YP_001328852.1 150398385 5324072 3364935..3365135 1 NC_009636.1 PFAM: protein of unknown function DUF1674; KEGG: sme:SMc04092 hypothetical protein; hypothetical protein 3365135 5324072 Smed_3193 Sinorhizobium medicae WSM419 hypothetical protein YP_001328852.1 3364935 D 366394 CDS YP_001328853.1 150398386 5324073 complement(3365302..3367251) 1 NC_009636.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3367251 5324073 Smed_3194 Sinorhizobium medicae WSM419 acetyl-CoA synthetase YP_001328853.1 3365302 R 366394 CDS YP_001328854.1 150398387 5324074 3367525..3368223 1 NC_009636.1 PFAM: protein of unknown function DUF1013; KEGG: sme:SMc04094 hypothetical protein; hypothetical protein 3368223 5324074 Smed_3195 Sinorhizobium medicae WSM419 hypothetical protein YP_001328854.1 3367525 D 366394 CDS YP_001328855.1 150398388 5324075 complement(3368314..3370221) 1 NC_009636.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMc04095 putative acyl-CoA synthetase protein; AMP-dependent synthetase and ligase 3370221 5324075 Smed_3196 Sinorhizobium medicae WSM419 AMP-dependent synthetase and ligase YP_001328855.1 3368314 R 366394 CDS YP_001328856.1 150398389 5324076 complement(3370334..3370993) 1 NC_009636.1 PFAM: alanine racemase domain protein; KEGG: sme:SMc02812 hypothetical protein; alanine racemase domain-containing protein 3370993 5324076 Smed_3197 Sinorhizobium medicae WSM419 alanine racemase domain-containing protein YP_001328856.1 3370334 R 366394 CDS YP_001328857.1 150398390 5324077 3371250..3373880 1 NC_009636.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3373880 leuS 5324077 leuS Sinorhizobium medicae WSM419 leucyl-tRNA synthetase YP_001328857.1 3371250 D 366394 CDS YP_001328858.1 150398391 5324078 3373867..3374412 1 NC_009636.1 KEGG: sme:SMc02803 hypothetical protein; hypothetical protein 3374412 5324078 Smed_3199 Sinorhizobium medicae WSM419 hypothetical protein YP_001328858.1 3373867 D 366394 CDS YP_001328859.1 150398392 5324079 3374425..3375456 1 NC_009636.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 3375456 holA 5324079 holA Sinorhizobium medicae WSM419 DNA polymerase III subunit delta YP_001328859.1 3374425 D 366394 CDS YP_001328860.1 150398393 5324080 complement(3375491..3376381) 1 NC_009636.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sme:SMc02801 probable chromosome partitioning protein PARB; parB-like partition protein 3376381 5324080 Smed_3201 Sinorhizobium medicae WSM419 parB-like partition protein YP_001328860.1 3375491 R 366394 CDS YP_001328861.1 150398394 5324081 complement(3376414..3377208) 1 NC_009636.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sme:SMc02800 probable chromosome partitioning protein PARA; cobyrinic acid ac-diamide synthase 3377208 5324081 Smed_3202 Sinorhizobium medicae WSM419 cobyrinic acid ac-diamide synthase YP_001328861.1 3376414 R 366394 CDS YP_001328862.1 150398395 5324082 complement(3377223..3377864) 1 NC_009636.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3377864 gidB 5324082 gidB Sinorhizobium medicae WSM419 16S rRNA methyltransferase GidB YP_001328862.1 3377223 R 366394 CDS YP_001328863.1 150398396 5324083 complement(3377873..3379744) 1 NC_009636.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3379744 5324083 Smed_3204 Sinorhizobium medicae WSM419 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001328863.1 3377873 R 366394 CDS YP_001328864.1 150398397 5324084 complement(3379862..3381184) 1 NC_009636.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 3381184 trmE 5324084 trmE Sinorhizobium medicae WSM419 tRNA modification GTPase TrmE YP_001328864.1 3379862 R 366394 CDS YP_001328865.1 150398398 5324085 complement(3381576..3382841) 1 NC_009636.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3382841 rho 5324085 rho Sinorhizobium medicae WSM419 transcription termination factor Rho YP_001328865.1 3381576 R 366394 CDS YP_001328866.1 150398399 5324086 complement(3383037..3383579) 1 NC_009636.1 PFAM: conserved hypothetical protein 701; KEGG: sme:SMc02795 hypothetical protein; hypothetical protein 3383579 5324086 Smed_3207 Sinorhizobium medicae WSM419 hypothetical protein YP_001328866.1 3383037 R 366394 CDS YP_001328867.1 150398400 5324087 complement(3383576..3384607) 1 NC_009636.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3384607 hemE 5324087 hemE Sinorhizobium medicae WSM419 uroporphyrinogen decarboxylase YP_001328867.1 3383576 R 366394 CDS YP_001328868.1 150398401 5324088 3385013..3385834 1 NC_009636.1 PFAM: protein of unknown function DUF299; KEGG: sme:SMc02793 hypothetical protein; hypothetical protein 3385834 5324088 Smed_3209 Sinorhizobium medicae WSM419 hypothetical protein YP_001328868.1 3385013 D 366394 CDS YP_001328869.1 150398402 5324089 3385891..3386490 1 NC_009636.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3386490 5324089 Smed_3210 Sinorhizobium medicae WSM419 Maf-like protein YP_001328869.1 3385891 D 366394 CDS YP_001328870.1 150398403 5324090 3386483..3387343 1 NC_009636.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3387343 aroE 5324090 aroE Sinorhizobium medicae WSM419 shikimate 5-dehydrogenase YP_001328870.1 3386483 D 366394 CDS YP_001328871.1 150398404 5324091 3387340..3387924 1 NC_009636.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3387924 coaE 5324091 coaE Sinorhizobium medicae WSM419 dephospho-CoA kinase YP_001328871.1 3387340 D 366394 CDS YP_001328872.1 150398405 5324092 3388060..3388788 1 NC_009636.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3388788 5324092 Smed_3213 Sinorhizobium medicae WSM419 DNA polymerase III subunit epsilon YP_001328872.1 3388060 D 366394 CDS YP_001328873.1 150398406 5324093 complement(3388950..3389456) 1 NC_009636.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 3389456 5324093 Smed_3214 Sinorhizobium medicae WSM419 preprotein translocase subunit SecB YP_001328873.1 3388950 R 366394 CDS YP_001328874.1 150398407 5324094 complement(3389549..3390097) 1 NC_009636.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: sme:SMc02787 hypothetical transmembrane protein; FxsA cytoplasmic membrane protein 3390097 5324094 Smed_3215 Sinorhizobium medicae WSM419 FxsA cytoplasmic membrane protein YP_001328874.1 3389549 R 366394 CDS YP_001328875.1 150398408 5324095 3390232..3390936 1 NC_009636.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: sme:SMc02786 putative translocase transmembrane protein; import inner membrane translocase subunit Tim44 3390936 5324095 Smed_3216 Sinorhizobium medicae WSM419 import inner membrane translocase subunit Tim44 YP_001328875.1 3390232 D 366394 CDS YP_001328876.1 150398409 5324096 3390954..3392072 1 NC_009636.1 PFAM: MltA domain protein; 3D domain protein; KEGG: sme:SMc02785 putative lytic murein transglycosylase A protein; MltA domain-containing protein 3392072 5324096 Smed_3217 Sinorhizobium medicae WSM419 MltA domain-containing protein YP_001328876.1 3390954 D 366394 CDS YP_001328877.1 150398410 5324097 3392065..3392640 1 NC_009636.1 PFAM: Smr protein/MutS2; KEGG: sme:SMc02784 hypothetical protein; Smr protein/MutS2 3392640 5324097 Smed_3218 Sinorhizobium medicae WSM419 Smr protein/MutS2 YP_001328877.1 3392065 D 366394 CDS YP_001328878.1 150398411 5324098 3392624..3393001 1 NC_009636.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc02783 hypothetical protein; XRE family transcriptional regulator 3393001 5324098 Smed_3219 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001328878.1 3392624 D 366394 CDS YP_001328879.1 150398412 5324099 3393136..3395571 1 NC_009636.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3395571 gyrB 5324099 gyrB Sinorhizobium medicae WSM419 DNA gyrase subunit B YP_001328879.1 3393136 D 366394 CDS YP_001328880.1 150398413 5324100 complement(3395649..3396245) 1 NC_009636.1 PFAM: nitroreductase; KEGG: sme:SMc02781 putative oxidoreductase protein; nitroreductase 3396245 5324100 Smed_3221 Sinorhizobium medicae WSM419 nitroreductase YP_001328880.1 3395649 R 366394 CDS YP_001328881.1 150398414 5324101 3396441..3397895 1 NC_009636.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sme:SMc02780 probable succinate-semialdehyde dehydrogenase [NADP+] protein; succinate-semialdehyde dehydrogenase 3397895 5324101 Smed_3222 Sinorhizobium medicae WSM419 succinate-semialdehyde dehydrogenase YP_001328881.1 3396441 D 366394 CDS YP_001328882.1 150398415 5324102 3398032..3398832 1 NC_009636.1 PFAM: HpcH/HpaI aldolase; KEGG: sme:SMc02778 putative hydroxyacid aldolase protein; 2-dehydro-3-deoxyglucarate aldolase 3398832 5324102 Smed_3223 Sinorhizobium medicae WSM419 2-dehydro-3-deoxyglucarate aldolase YP_001328882.1 3398032 D 366394 CDS YP_001328883.1 150398416 5324103 complement(3398833..3399711) 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc02777 putative transcription regulator protein; GntR family transcriptional regulator 3399711 5324103 Smed_3224 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328883.1 3398833 R 366394 CDS YP_001328884.1 150398417 5324104 3399877..3401382 1 NC_009636.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: sme:SMc02776 putative altronate hydrolase protein; altronate dehydratase 3401382 5324104 Smed_3225 Sinorhizobium medicae WSM419 altronate dehydratase YP_001328884.1 3399877 D 366394 CDS YP_001328885.1 150398418 5324105 3401447..3402466 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc02775 putative L-fucose dehydrogenase (D-threo aldose 1-dehydrogenase) protein; pyridoxal 4-dehydrogenase 3402466 5324105 Smed_3226 Sinorhizobium medicae WSM419 pyridoxal 4-dehydrogenase YP_001328885.1 3401447 D 366394 CDS YP_001328886.1 150398419 5324106 3402576..3403565 1 NC_009636.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMc02774 putative ABC transporter periplasmic binding protein; periplasmic binding protein/LacI transcriptional regulator 3403565 5324106 Smed_3227 Sinorhizobium medicae WSM419 periplasmic binding protein/LacI transcriptional regulator YP_001328886.1 3402576 D 366394 CDS YP_001328887.1 150398420 5324107 3403680..3405233 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02773 putative ABC transporter ATP-binding protein; ABC transporter-like protein 3405233 5324107 Smed_3228 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328887.1 3403680 D 366394 CDS YP_001328888.1 150398421 5324108 3405270..3406244 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc02772 putative sugar ABC transporter permease protein; monosaccharide-transporting ATPase 3406244 5324108 Smed_3229 Sinorhizobium medicae WSM419 monosaccharide-transporting ATPase YP_001328888.1 3405270 D 366394 CDS YP_001328889.1 150398422 5324109 3406291..3407307 1 NC_009636.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc02771 putative zinc-type alcohol dehydrogenase protein; alcohol dehydrogenase 3407307 5324109 Smed_3230 Sinorhizobium medicae WSM419 alcohol dehydrogenase YP_001328889.1 3406291 D 366394 CDS YP_001328890.1 150398423 5324110 complement(3407395..3407679) 1 NC_009636.1 PFAM: plasmid stabilization system; KEGG: sme:SMa0473 hypothetical protein; plasmid stabilization system protein 3407679 5324110 Smed_3231 Sinorhizobium medicae WSM419 plasmid stabilization system protein YP_001328890.1 3407395 R 366394 CDS YP_001328891.1 150398424 5324111 complement(3407676..3407984) 1 NC_009636.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: nha:Nham_4666 RelB antitoxin; addiction module antitoxin 3407984 5324111 Smed_3232 Sinorhizobium medicae WSM419 addiction module antitoxin YP_001328891.1 3407676 R 366394 CDS YP_001328892.1 150398425 5324112 3408216..3409490 1 NC_009636.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: sme:SMc02770 hypothetical protein; polyhydroxyalkanoate depolymerase 3409490 5324112 Smed_3233 Sinorhizobium medicae WSM419 polyhydroxyalkanoate depolymerase YP_001328892.1 3408216 D 366394 CDS YP_001328893.1 150398426 5324113 3409681..3410106 1 NC_009636.1 KEGG: sme:SMc02769 hypothetical protein; hypothetical protein 3410106 5324113 Smed_3234 Sinorhizobium medicae WSM419 hypothetical protein YP_001328893.1 3409681 D 366394 CDS YP_001328894.1 150398427 5324114 3410229..3410984 1 NC_009636.1 PFAM: protein of unknown function DUF45; KEGG: sme:SMc02768 hypothetical protein; hypothetical protein 3410984 5324114 Smed_3235 Sinorhizobium medicae WSM419 hypothetical protein YP_001328894.1 3410229 D 366394 CDS YP_001328895.1 150398428 5324115 3411141..3411788 1 NC_009636.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 3411788 5324115 Smed_3236 Sinorhizobium medicae WSM419 N-(5'-phosphoribosyl)anthranilate isomerase YP_001328895.1 3411141 D 366394 CDS YP_001328896.1 150398429 5324116 3411810..3413030 1 NC_009636.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3413030 5324116 Smed_3237 Sinorhizobium medicae WSM419 tryptophan synthase subunit beta YP_001328896.1 3411810 D 366394 CDS YP_001328897.1 150398430 5324117 3413036..3413875 1 NC_009636.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 3413875 trpA 5324117 trpA Sinorhizobium medicae WSM419 tryptophan synthase subunit alpha YP_001328897.1 3413036 D 366394 CDS YP_001328898.1 150398431 5324118 3413929..3414843 1 NC_009636.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3414843 5324118 Smed_3239 Sinorhizobium medicae WSM419 acetyl-CoA carboxylase subunit beta YP_001328898.1 3413929 D 366394 CDS YP_001328899.1 150398432 5324119 3414978..3416321 1 NC_009636.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: sme:SMc02763 probable folc bifunctional protein (folylpolyglutamate synthase / dihydrofolate synthase); bifunctional folylpolyglutamate synthase/dihydrofolate synthase 3416321 5324119 Smed_3240 Sinorhizobium medicae WSM419 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001328899.1 3414978 D 366394 CDS YP_001328900.1 150398433 5324120 complement(3416463..3416786) 1 NC_009636.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sme:SMc02761 probable thioredoxin protein; thioredoxin 3416786 5324120 Smed_3241 Sinorhizobium medicae WSM419 thioredoxin YP_001328900.1 3416463 R 366394 CDS YP_001328901.1 150398434 5324121 complement(3416868..3420437) 1 NC_009636.1 TIGRFAM: Double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: sme:SMc02760 putative ATP-dependent nuclease/helicase protein; double-strand break repair helicase AddA 3420437 5324121 Smed_3242 Sinorhizobium medicae WSM419 double-strand break repair helicase AddA YP_001328901.1 3416868 R 366394 CDS YP_001328902.1 150398435 5324122 complement(3420427..3423606) 1 NC_009636.1 TIGRFAM: Double-strand break repair protein AddB; KEGG: sme:SMc02759 hypothetical protein; double-strand break repair protein AddB 3423606 5324122 Smed_3243 Sinorhizobium medicae WSM419 double-strand break repair protein AddB YP_001328902.1 3420427 R 366394 CDS YP_001328903.1 150398436 5324123 complement(3423608..3424339) 1 NC_009636.1 PFAM: Nucleotidyl transferase; KEGG: sme:SMc02758 putative nucleotidyl transferase protein; nucleotidyl transferase 3424339 5324123 Smed_3244 Sinorhizobium medicae WSM419 nucleotidyl transferase YP_001328903.1 3423608 R 366394 CDS YP_001328904.1 150398437 5324124 complement(3424346..3425860) 1 NC_009636.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: sme:SMc02757 hypothetical protein; hypothetical protein 3425860 5324124 Smed_3245 Sinorhizobium medicae WSM419 hypothetical protein YP_001328904.1 3424346 R 366394 CDS YP_001328905.1 150398438 5324125 complement(3425870..3428350) 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc02756 putative sensor histidine kinase protein; histidine kinase 3428350 5324125 Smed_3246 Sinorhizobium medicae WSM419 histidine kinase YP_001328905.1 3425870 R 366394 CDS YP_001328906.1 150398439 5324126 complement(3428654..3430054) 1 NC_009636.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3430054 5324126 Smed_3247 Sinorhizobium medicae WSM419 S-adenosyl-L-homocysteine hydrolase YP_001328906.1 3428654 R 366394 CDS YP_001328907.1 150398440 5324127 complement(3430211..3430504) 1 NC_009636.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sme:SMc02754 putative phosphocarrier HPR transmembrane protein; phosphotransferase system, phosphocarrier protein HPr 3430504 5324127 Smed_3248 Sinorhizobium medicae WSM419 phosphotransferase system, phosphocarrier protein HPr YP_001328907.1 3430211 R 366394 CDS YP_001328908.1 150398441 5324128 complement(3430501..3430902) 1 NC_009636.1 PFAM: PTS system fructose subfamily IIA component; KEGG: sme:SMc02753 putative IIA component of PTS system protein; PTS system fructose subfamily transporter subunit IIA 3430902 5324128 Smed_3249 Sinorhizobium medicae WSM419 PTS system fructose subfamily transporter subunit IIA YP_001328908.1 3430501 R 366394 CDS YP_001328909.1 150398442 5324129 complement(3431067..3431552) 1 NC_009636.1 KEGG: sme:SMc02752 hypothetical protein; HPr kinase 3431552 5324129 Smed_3250 Sinorhizobium medicae WSM419 HPr kinase YP_001328909.1 3431067 R 366394 CDS YP_001328910.1 150398443 5324130 complement(3431549..3433285) 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sme:SMc04446 histidine kinase sensory transmembrane protein; integral membrane sensor signal transduction histidine kinase 3433285 5324130 Smed_3251 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001328910.1 3431549 R 366394 CDS YP_001328911.1 150398444 5324131 complement(3433476..3434198) 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sme:SMc02560 transcriptional regulatory protein; two component transcriptional regulator 3434198 5324131 Smed_3252 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001328911.1 3433476 R 366394 CDS YP_001328912.1 150398445 5324132 3434539..3436149 1 NC_009636.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 3436149 5324132 Smed_3253 Sinorhizobium medicae WSM419 phosphoenolpyruvate carboxykinase YP_001328912.1 3434539 D 366394 CDS YP_001328913.1 150398446 5324133 3436255..3436689 1 NC_009636.1 PFAM: Class I peptide chain release factor; KEGG: sme:SMc02563 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 3436689 5324133 Smed_3254 Sinorhizobium medicae WSM419 peptidyl-tRNA hydrolase domain-containing protein YP_001328913.1 3436255 D 366394 CDS YP_001328914.1 150398447 5324134 3436779..3437252 1 NC_009636.1 PFAM: Peptidoglycan-binding LysM; transport-associated; SMART: Transport-associated and nodulation region; KEGG: sme:SMc02564 hypothetical protein; LysM domain/BON superfamily protein 3437252 5324134 Smed_3255 Sinorhizobium medicae WSM419 LysM domain/BON superfamily protein YP_001328914.1 3436779 D 366394 CDS YP_001328915.1 150398448 5324135 3437367..3437978 1 NC_009636.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: sme:SMc02566 probable DNA repair system specific for alkylated DNA protein; 2OG-Fe(II) oxygenase 3437978 5324135 Smed_3256 Sinorhizobium medicae WSM419 2OG-Fe(II) oxygenase YP_001328915.1 3437367 D 366394 CDS YP_001328916.1 150398449 5324136 complement(3438155..3439150) 1 NC_009636.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 3439150 5324136 Smed_3257 Sinorhizobium medicae WSM419 pantothenate kinase YP_001328916.1 3438155 R 366394 CDS YP_001328917.1 150398450 5324137 complement(3439147..3439470) 1 NC_009636.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 3439470 hisE 5324137 hisE Sinorhizobium medicae WSM419 phosphoribosyl-ATP pyrophosphatase YP_001328917.1 3439147 R 366394 CDS YP_001328918.1 150398451 5324138 complement(3439495..3440271) 1 NC_009636.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3440271 5324138 Smed_3259 Sinorhizobium medicae WSM419 imidazole glycerol phosphate synthase subunit HisF YP_001328918.1 3439495 R 366394 CDS YP_001328919.1 150398452 5324139 complement(3440268..3441014) 1 NC_009636.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3441014 5324139 Smed_3260 Sinorhizobium medicae WSM419 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001328919.1 3440268 R 366394 CDS YP_001328920.1 150398453 5324140 complement(3441048..3441698) 1 NC_009636.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3441698 hisH 5324140 hisH Sinorhizobium medicae WSM419 imidazole glycerol phosphate synthase subunit HisH YP_001328920.1 3441048 R 366394 CDS YP_001328921.1 150398454 5324141 complement(3441698..3442174) 1 NC_009636.1 KEGG: sme:SMc02573 hypothetical protein; hypothetical protein 3442174 5324141 Smed_3262 Sinorhizobium medicae WSM419 hypothetical protein YP_001328921.1 3441698 R 366394 CDS YP_001328922.1 150398455 5324142 complement(3442201..3442809) 1 NC_009636.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 3442809 hisB 5324142 hisB Sinorhizobium medicae WSM419 imidazoleglycerol-phosphate dehydratase YP_001328922.1 3442201 R 366394 CDS YP_001328923.1 150398456 5324143 3443126..3443683 1 NC_009636.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 3443683 5324143 Smed_3264 Sinorhizobium medicae WSM419 ATP-dependent protease peptidase subunit YP_001328923.1 3443126 D 366394 CDS YP_001328924.1 150398457 5324144 3443673..3444191 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc02576 hypothetical acetyltransferase protein; N-acetyltransferase GCN5 3444191 5324144 Smed_3265 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001328924.1 3443673 D 366394 CDS YP_001328925.1 150398458 5324145 3444191..3445498 1 NC_009636.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 3445498 hslU 5324145 hslU Sinorhizobium medicae WSM419 ATP-dependent protease ATP-binding subunit HslU YP_001328925.1 3444191 D 366394 CDS YP_001328926.1 150398459 5324146 3445687..3446637 1 NC_009636.1 PFAM: protein of unknown function DUF1402; KEGG: sme:SMc02578 hypothetical protein; hypothetical protein 3446637 5324146 Smed_3267 Sinorhizobium medicae WSM419 hypothetical protein YP_001328926.1 3445687 D 366394 CDS YP_001328927.1 150398460 5324147 3446902..3448302 1 NC_009636.1 PFAM: cytochrome P450; KEGG: sme:SMc02579 putative cytochrome P450 monooxygenase protein; cytochrome P450 3448302 5324147 Smed_3268 Sinorhizobium medicae WSM419 cytochrome P450 YP_001328927.1 3446902 D 366394 CDS YP_001328928.1 150398461 5324148 3448396..3450399 1 NC_009636.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: sme:SMc02580 hypothetical protein; hydantoinase/oxoprolinase 3450399 5324148 Smed_3269 Sinorhizobium medicae WSM419 hydantoinase/oxoprolinase YP_001328928.1 3448396 D 366394 CDS YP_001328929.1 150398462 5324149 3450562..3452736 1 NC_009636.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3452736 5324149 Smed_3270 Sinorhizobium medicae WSM419 malate synthase G YP_001328929.1 3450562 D 366394 CDS YP_001328930.1 150398463 5324150 complement(3452834..3453508) 1 NC_009636.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sme:SMc02582 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3453508 5324150 Smed_3271 Sinorhizobium medicae WSM419 ErfK/YbiS/YcfS/YnhG family protein YP_001328930.1 3452834 R 366394 CDS YP_001328931.1 150398464 5324151 3453704..3454228 1 NC_009636.1 PFAM: protein of unknown function DUF1052; KEGG: sme:SMc02583 hypothetical protein; hypothetical protein 3454228 5324151 Smed_3272 Sinorhizobium medicae WSM419 hypothetical protein YP_001328931.1 3453704 D 366394 CDS YP_001328932.1 150398465 5324152 complement(3454265..3454849) 1 NC_009636.1 PFAM: response regulator receiver; KEGG: sme:SMc02584 transcription regulator protein; two component Fis family transcriptional regulator 3454849 5324152 Smed_3273 Sinorhizobium medicae WSM419 two component Fis family transcriptional regulator YP_001328932.1 3454265 R 366394 CDS YP_001328933.1 150398466 5324153 complement(3455027..3456328) 1 NC_009636.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMc02585 sensor histidine kinase transmembrane protein; integral membrane sensor signal transduction histidine kinase 3456328 5324153 Smed_3274 Sinorhizobium medicae WSM419 integral membrane sensor signal transduction histidine kinase YP_001328933.1 3455027 R 366394 CDS YP_001328934.1 150398467 5324154 complement(3456417..3458882) 1 NC_009636.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: sme:SMc02586 ATP-dependent helicase protein; ATP-dependent helicase HrpB 3458882 5324154 Smed_3275 Sinorhizobium medicae WSM419 ATP-dependent helicase HrpB YP_001328934.1 3456417 R 366394 CDS YP_001328935.1 150398468 5324155 complement(3458879..3459562) 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02587 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3459562 5324155 Smed_3276 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328935.1 3458879 R 366394 CDS YP_001328936.1 150398469 5324156 complement(3459563..3461260) 1 NC_009636.1 KEGG: sme:SMc02588 putative permease ABC transporter protein; putative permease ABC transporter protein 3461260 5324156 Smed_3277 Sinorhizobium medicae WSM419 putative permease ABC transporter protein YP_001328936.1 3459563 R 366394 CDS YP_001328937.1 150398470 5324157 complement(3461244..3462470) 1 NC_009636.1 KEGG: sme:SMc02589 conserved hypothetical protein; putative ABC transporter solute-binding protein 3462470 5324157 Smed_3278 Sinorhizobium medicae WSM419 putative ABC transporter solute-binding protein YP_001328937.1 3461244 R 366394 CDS YP_001328938.1 150398471 5324164 complement(3469459..3471963) 1 NC_009636.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: sit:TM1040_3231 periplasmic sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 3471963 5324164 Smed_3279 Sinorhizobium medicae WSM419 multi-sensor hybrid histidine kinase YP_001328938.1 3469459 R 366394 CDS YP_001328939.1 150398472 5324165 complement(3471960..3472685) 1 NC_009636.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sit:TM1040_3232 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3472685 5324165 Smed_3280 Sinorhizobium medicae WSM419 two component transcriptional regulator YP_001328939.1 3471960 R 366394 CDS YP_001328940.1 150398473 5324166 3472941..3473972 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_1059 iron ABC transporter iron-binding protein, putative; extracellular solute-binding protein 3473972 5324166 Smed_3281 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328940.1 3472941 D 366394 CDS YP_001328941.1 150398474 5324168 3476195..3477247 1 NC_009636.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0512 ABC transporter, ATP-binding protein; ABC transporter-like protein 3477247 5324168 Smed_3284 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328941.1 3476195 D 366394 CDS YP_001328942.1 150398475 5324169 complement(3477266..3477499) 1 NC_009636.1 hypothetical protein 3477499 5324169 Smed_3285 Sinorhizobium medicae WSM419 hypothetical protein YP_001328942.1 3477266 R 366394 CDS YP_001328943.1 150398476 5324170 complement(3477527..3478060) 1 NC_009636.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: sme:SMc02605 putative sarcosine oxidase gamma subunit protein; sarcosine oxidase subunit gamma 3478060 5324170 Smed_3286 Sinorhizobium medicae WSM419 sarcosine oxidase subunit gamma YP_001328943.1 3477527 R 366394 CDS YP_001328944.1 150398477 5324171 complement(3478053..3481016) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc02606 putative sarcosine oxidase alpha subunit transmembrane protein; sarcosine oxidase subunit alpha 3481016 5324171 Smed_3287 Sinorhizobium medicae WSM419 sarcosine oxidase subunit alpha YP_001328944.1 3478053 R 366394 CDS YP_001328945.1 150398478 5324172 complement(3481013..3481291) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: sme:SMc02607 sarcosine oxidase delta subunit protein; sarcosine oxidase subunit delta 3481291 5324172 Smed_3288 Sinorhizobium medicae WSM419 sarcosine oxidase subunit delta YP_001328945.1 3481013 R 366394 CDS YP_001328946.1 150398479 5324173 complement(3481318..3482568) 1 NC_009636.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc02608 sarcosine oxidase beta subunit protein; sarcosine oxidase subunit beta 3482568 5324173 Smed_3289 Sinorhizobium medicae WSM419 sarcosine oxidase subunit beta YP_001328946.1 3481318 R 366394 CDS YP_001328947.1 150398480 5324174 3482663..3483637 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc02609 putative transcription regulator protein; AraC family transcriptional regulator 3483637 5324174 Smed_3290 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001328947.1 3482663 D 366394 CDS YP_001328948.1 150398481 5324175 3483737..3484642 1 NC_009636.1 PFAM: glutamine amidotransferase class-II; KEGG: sme:SMc02610 putative amidotransferase protein; glutamine amidotransferase 3484642 5324175 Smed_3291 Sinorhizobium medicae WSM419 glutamine amidotransferase YP_001328948.1 3483737 D 366394 CDS YP_001328949.1 150398482 5324176 3484678..3485364 1 NC_009636.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: sme:SMc02611 putative oxidoreductase protein; glutamate synthase subunit alpha 3485364 5324176 Smed_3292 Sinorhizobium medicae WSM419 glutamate synthase subunit alpha YP_001328949.1 3484678 D 366394 CDS YP_001328950.1 150398483 5324177 3485380..3486708 1 NC_009636.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: sme:SMc02612 putative oxidoreductase protein; ferredoxin-dependent glutamate synthase 3486708 5324177 Smed_3293 Sinorhizobium medicae WSM419 ferredoxin-dependent glutamate synthase YP_001328950.1 3485380 D 366394 CDS YP_001328951.1 150398484 5324178 3486709..3488094 1 NC_009636.1 PFAM: glutamine synthetase catalytic region; KEGG: sme:SMc02613 glutamine synthetase III protein; glutamine synthetase 3488094 5324178 Smed_3294 Sinorhizobium medicae WSM419 glutamine synthetase YP_001328951.1 3486709 D 366394 CDS YP_001328952.1 150398485 5324179 complement(3488252..3488515) 1 NC_009636.1 KEGG: sme:SMc02614 hypothetical protein; hypothetical protein 3488515 5324179 Smed_3295 Sinorhizobium medicae WSM419 hypothetical protein YP_001328952.1 3488252 R 366394 CDS YP_001328953.1 150398486 5324180 complement(3488550..3489287) 1 NC_009636.1 KEGG: sme:SMc02615 hypothetical signal peptide protein; putative signal peptide protein 3489287 5324180 Smed_3296 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001328953.1 3488550 R 366394 CDS YP_001328954.1 150398487 5324181 complement(3489413..3490810) 1 NC_009636.1 PFAM: amino acid permease-associated region; KEGG: sme:SMc02616 putative permease transmembrane protein; amino acid permease-associated protein 3490810 5324181 Smed_3297 Sinorhizobium medicae WSM419 amino acid permease-associated protein YP_001328954.1 3489413 R 366394 CDS YP_001328955.1 150398488 5324182 complement(3490825..3490986) 1 NC_009636.1 KEGG: sme:SMc02617 hypothetical protein; hypothetical protein 3490986 5324182 Smed_3298 Sinorhizobium medicae WSM419 hypothetical protein YP_001328955.1 3490825 R 366394 CDS YP_001328956.1 150398489 5324183 complement(3491066..3491449) 1 NC_009636.1 KEGG: sme:SMc02618 hypothetical protein; hypothetical protein 3491449 5324183 Smed_3299 Sinorhizobium medicae WSM419 hypothetical protein YP_001328956.1 3491066 R 366394 CDS YP_001328957.1 150398490 5324184 complement(3491458..3491775) 1 NC_009636.1 KEGG: sme:SMc02619 hypothetical protein; hypothetical protein 3491775 5324184 Smed_3300 Sinorhizobium medicae WSM419 hypothetical protein YP_001328957.1 3491458 R 366394 CDS YP_001328958.1 150398491 5324185 3492107..3492811 1 NC_009636.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sme:SMc02620 hypothetical protein; XRE family transcriptional regulator 3492811 5324185 Smed_3301 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001328958.1 3492107 D 366394 CDS YP_001328959.1 150398492 5324186 complement(3492854..3493834) 1 NC_009636.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: ttj:TTHA0473 peptide ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase 3493834 5324186 Smed_3302 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter ATPase YP_001328959.1 3492854 R 366394 CDS YP_001328960.1 150398493 5324187 complement(3493831..3494859) 1 NC_009636.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: dge:Dgeo_1341 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; oligopeptide/dipeptide ABC transporter ATPase 3494859 5324187 Smed_3303 Sinorhizobium medicae WSM419 oligopeptide/dipeptide ABC transporter ATPase YP_001328960.1 3493831 R 366394 CDS YP_001328961.1 150398494 5324188 complement(3494864..3495865) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1472 putative dipeptide transport permease protein; binding-protein-dependent transport system inner membrane protein 3495865 5324188 Smed_3304 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328961.1 3494864 R 366394 CDS YP_001328962.1 150398495 5324189 complement(3495875..3496720) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecs:ECs2089 putative transport protein; binding-protein-dependent transport system inner membrane protein 3496720 5324189 Smed_3305 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328962.1 3495875 R 366394 CDS YP_001328963.1 150398496 5324190 complement(3496870..3498555) 1 NC_009636.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: nca:Noca_0080 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 3498555 5324190 Smed_3306 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001328963.1 3496870 R 366394 CDS YP_001328964.1 150398497 5324191 complement(3498596..3500617) 1 NC_009636.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: nca:Noca_0079 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 3500617 5324191 Smed_3307 Sinorhizobium medicae WSM419 5-oxoprolinase YP_001328964.1 3498596 R 366394 CDS YP_001328965.1 150398498 5324192 complement(3500639..3502225) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: ecs:ECs2091 putative hemin-binding lipoprotein; extracellular solute-binding protein 3502225 5324192 Smed_3308 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328965.1 3500639 R 366394 CDS YP_001328966.1 150398499 5324193 3502836..3503465 1 NC_009636.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_3227 transcriptional regulator, XRE family with cupin sensor domain; XRE family transcriptional regulator 3503465 5324193 Smed_3309 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001328966.1 3502836 D 366394 CDS YP_001328967.1 150398500 5324194 3503641..3504525 1 NC_009636.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 3504525 purU 5324194 purU Sinorhizobium medicae WSM419 formyltetrahydrofolate deformylase YP_001328967.1 3503641 D 366394 CDS YP_001328968.1 150398501 5324195 3504719..3505852 1 NC_009636.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rle:pRL110552 putative aminomethyltransferase/glycine cleavage protein; glycine cleavage T protein (aminomethyl transferase) 3505852 5324195 Smed_3311 Sinorhizobium medicae WSM419 glycine cleavage T protein (aminomethyl transferase) YP_001328968.1 3504719 D 366394 CDS YP_001328969.1 150398502 5324196 3505864..3506469 1 NC_009636.1 KEGG: sme:SMc04152 hypothetical protein; hypothetical protein 3506469 5324196 Smed_3312 Sinorhizobium medicae WSM419 hypothetical protein YP_001328969.1 3505864 D 366394 CDS YP_001328970.1 150398503 5324197 3506466..3507431 1 NC_009636.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMc04151 putative ferredoxin protein; ferredoxin 3507431 5324197 Smed_3313 Sinorhizobium medicae WSM419 ferredoxin YP_001328970.1 3506466 D 366394 CDS YP_001328971.1 150398504 5324198 3507542..3508582 1 NC_009636.1 KEGG: sme:SMc04150 hypothetical protein; hypothetical protein 3508582 5324198 Smed_3314 Sinorhizobium medicae WSM419 hypothetical protein YP_001328971.1 3507542 D 366394 CDS YP_001328972.1 150398505 5324199 3508630..3509967 1 NC_009636.1 PFAM: flavin-containing monooxygenase FMO; KEGG: sme:SMc04149 putative oxidoreductase protein; flavin-containing monooxygenase FMO 3509967 5324199 Smed_3315 Sinorhizobium medicae WSM419 flavin-containing monooxygenase FMO YP_001328972.1 3508630 D 366394 CDS YP_001328973.1 150398506 5324200 complement(3510085..3512454) 1 NC_009636.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc04148 putative aminomethyltransferase protein; glycine cleavage T protein (aminomethyl transferase) 3512454 5324200 Smed_3316 Sinorhizobium medicae WSM419 glycine cleavage T protein (aminomethyl transferase) YP_001328973.1 3510085 R 366394 CDS YP_001328974.1 150398507 5324201 3512684..3514468 1 NC_009636.1 PFAM: amino acid permease-associated region; KEGG: sme:SMc04147 putative permease protein; amino acid permease-associated protein 3514468 5324201 Smed_3317 Sinorhizobium medicae WSM419 amino acid permease-associated protein YP_001328974.1 3512684 D 366394 CDS YP_001328975.1 150398508 5324203 complement(3516048..3516833) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sme:SMc04145 hypothetical protein; NAD-dependent epimerase/dehydratase 3516833 5324203 Smed_3319 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001328975.1 3516048 R 366394 CDS YP_001328976.1 150398509 5324204 complement(3516894..3518618) 1 NC_009636.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 3518618 5324204 Smed_3320 Sinorhizobium medicae WSM419 dihydroxy-acid dehydratase YP_001328976.1 3516894 R 366394 CDS YP_001328977.1 150398510 5324205 3518696..3519418 1 NC_009636.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc04143 putative transcription regulator protein; GntR family transcriptional regulator 3519418 5324205 Smed_3321 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001328977.1 3518696 D 366394 CDS YP_001328978.1 150398511 5324206 3519651..3520535 1 NC_009636.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMc04142 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein 3520535 5324206 Smed_3322 Sinorhizobium medicae WSM419 SMP-30/gluconolaconase/LRE domain-containing protein YP_001328978.1 3519651 D 366394 CDS YP_001328979.1 150398512 5324207 complement(3520556..3521197) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc04141 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3521197 5324207 Smed_3323 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001328979.1 3520556 R 366394 CDS YP_001328980.1 150398513 5324208 complement(3521222..3522301) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04140 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3522301 5324208 Smed_3324 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328980.1 3521222 R 366394 CDS YP_001328981.1 150398514 5324209 complement(3522324..3523397) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc04139 putative oxidoreductase protein; oxidoreductase domain-containing protein 3523397 5324209 Smed_3325 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328981.1 3522324 R 366394 CDS YP_001328982.1 150398515 5324210 complement(3523399..3524415) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc04138 putative oxidoreductase protein; oxidoreductase domain-containing protein 3524415 5324210 Smed_3326 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328982.1 3523399 R 366394 CDS YP_001328983.1 150398516 5324211 complement(3524435..3525322) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3525322 5324211 Smed_3327 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328983.1 3524435 R 366394 CDS YP_001328984.1 150398517 5324212 complement(3525315..3526271) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04136 putative transport system permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3526271 5324212 Smed_3328 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001328984.1 3525315 R 366394 CDS YP_001328985.1 150398518 5324213 complement(3526276..3527562) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04135 putative periplasmic binding ABC transporter protein; extracellular solute-binding protein 3527562 5324213 Smed_3329 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001328985.1 3526276 R 366394 CDS YP_001328986.1 150398519 5324214 3527751..3528428 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc04134 putative transcription regulator protein; TetR family transcriptional regulator 3528428 5324214 Smed_3330 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001328986.1 3527751 D 366394 CDS YP_001328987.1 150398520 5324215 3528552..3529700 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc04133 putative oxidoreductase protein; oxidoreductase domain-containing protein 3529700 5324215 Smed_3331 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328987.1 3528552 D 366394 CDS YP_001328988.1 150398521 5324216 3529704..3530867 1 NC_009636.1 PFAM: protein of unknown function DUF993; KEGG: sme:SMc04132 hypothetical protein; hypothetical protein 3530867 5324216 Smed_3332 Sinorhizobium medicae WSM419 hypothetical protein YP_001328988.1 3529704 D 366394 CDS YP_001328989.1 150398522 5324217 3530877..3532298 1 NC_009636.1 KEGG: sme:SMc04131 hypothetical protein; hypothetical protein 3532298 5324217 Smed_3333 Sinorhizobium medicae WSM419 hypothetical protein YP_001328989.1 3530877 D 366394 CDS YP_001328990.1 150398523 5324218 3532318..3533151 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc04130 hypothetical protein; xylose isomerase domain-containing protein 3533151 5324218 Smed_3334 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001328990.1 3532318 D 366394 CDS YP_001328991.1 150398524 5324219 3533307..3534596 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: sme:SMc04129 putative oxidoreductase protein; oxidoreductase domain-containing protein 3534596 5324219 Smed_3335 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001328991.1 3533307 D 366394 CDS YP_001328992.1 150398525 5324220 3534676..3536910 1 NC_009636.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sme:SMc04128 putative heavy metal transporting ATPase protein; heavy metal translocating P-type ATPase 3536910 5324220 Smed_3336 Sinorhizobium medicae WSM419 heavy metal translocating P-type ATPase YP_001328992.1 3534676 D 366394 CDS YP_001328993.1 150398526 5324221 3537182..3538717 1 NC_009636.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04127 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3538717 5324221 Smed_3337 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001328993.1 3537182 D 366394 CDS YP_001328994.1 150398527 5324222 3538714..3539847 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc04126 putative transport system permease ABC transporter protein; inner-membrane translocator 3539847 5324222 Smed_3338 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328994.1 3538714 D 366394 CDS YP_001328995.1 150398528 5324223 3539850..3540821 1 NC_009636.1 PFAM: inner-membrane translocator; KEGG: sme:SMc04125 putative transport system permease ABC transporter protein; inner-membrane translocator 3540821 5324223 Smed_3339 Sinorhizobium medicae WSM419 inner-membrane translocator YP_001328995.1 3539850 D 366394 CDS YP_001328996.1 150398529 5324224 3540825..3541283 1 NC_009636.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3541283 5324224 Smed_3340 Sinorhizobium medicae WSM419 cytidine deaminase YP_001328996.1 3540825 D 366394 CDS YP_001328997.1 150398530 5324225 3541280..3542077 1 NC_009636.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 3542077 5324225 Smed_3341 Sinorhizobium medicae WSM419 purine nucleoside phosphorylase YP_001328997.1 3541280 D 366394 CDS YP_001328998.1 150398531 5324226 3542078..3543394 1 NC_009636.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 3543394 deoA 5324226 deoA Sinorhizobium medicae WSM419 thymidine phosphorylase YP_001328998.1 3542078 D 366394 CDS YP_001328999.1 150398532 5324227 complement(3543425..3544054) 1 NC_009636.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3544054 upp 5324227 upp Sinorhizobium medicae WSM419 uracil phosphoribosyltransferase YP_001328999.1 3543425 R 366394 CDS YP_001329000.1 150398533 5324228 complement(3544217..3545191) 1 NC_009636.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 3545191 5324228 Smed_3344 Sinorhizobium medicae WSM419 adenosine deaminase YP_001329000.1 3544217 R 366394 CDS YP_001329001.1 150398534 5324229 complement(3545188..3546408) 1 NC_009636.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3546408 5324229 Smed_3345 Sinorhizobium medicae WSM419 phosphopentomutase YP_001329001.1 3545188 R 366394 CDS YP_001329002.1 150398535 5324230 complement(3546580..3547164) 1 NC_009636.1 KEGG: sme:SMc04118 hypothetical protein; hypothetical protein 3547164 5324230 Smed_3346 Sinorhizobium medicae WSM419 hypothetical protein YP_001329002.1 3546580 R 366394 CDS YP_001329003.1 150398536 5324231 complement(3547172..3547786) 1 NC_009636.1 PFAM: TadE family protein; KEGG: sme:SMc04117 hypothetical protein; TadE family protein 3547786 5324231 Smed_3347 Sinorhizobium medicae WSM419 TadE family protein YP_001329003.1 3547172 R 366394 CDS YP_001329004.1 150398537 5324232 complement(3547955..3548377) 1 NC_009636.1 KEGG: sme:SMc04115 hypothetical protein; hypothetical protein 3548377 5324232 Smed_3348 Sinorhizobium medicae WSM419 hypothetical protein YP_001329004.1 3547955 R 366394 CDS YP_001329005.1 150398538 5324233 3548629..3548814 1 NC_009636.1 PFAM: Flp/Fap pilin component; KEGG: sme:SMc04114 putative pilin subunit protein; Flp/Fap pilin protein 3548814 5324233 Smed_3349 Sinorhizobium medicae WSM419 Flp/Fap pilin protein YP_001329005.1 3548629 D 366394 CDS YP_001329006.1 150398539 5324234 3548902..3549414 1 NC_009636.1 PFAM: peptidase A24A prepilin type IV; KEGG: sme:SMc04113 prepilin peptidase CpaA; peptidase A24A prepilin type IV 3549414 5324234 Smed_3350 Sinorhizobium medicae WSM419 peptidase A24A prepilin type IV YP_001329006.1 3548902 D 366394 CDS YP_001329007.1 150398540 5324235 3549564..3550373 1 NC_009636.1 PFAM: SAF domain protein; KEGG: sme:SMc04112 putative pilus assembly signal peptide protein; SAF domain-containing protein 3550373 5324235 Smed_3351 Sinorhizobium medicae WSM419 SAF domain-containing protein YP_001329007.1 3549564 D 366394 CDS YP_001329008.1 150398541 5324236 3550348..3551922 1 NC_009636.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: sme:SMc04111 putative pilus assembly transmembrane protein; type II and III secretion system protein 3551922 5324236 Smed_3352 Sinorhizobium medicae WSM419 type II and III secretion system protein YP_001329008.1 3550348 D 366394 CDS YP_001329009.1 150398542 5324237 3551931..3552659 1 NC_009636.1 TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: sme:SMc04110 pilus assembly protein cpaD; pilus biogenesis lipoprotein CpaD 3552659 5324237 Smed_3353 Sinorhizobium medicae WSM419 pilus biogenesis lipoprotein CpaD YP_001329009.1 3551931 D 366394 CDS YP_001329010.1 150398543 5324238 3552684..3553970 1 NC_009636.1 KEGG: sme:SMc04109 putative response regulator protein; response regulator receiver protein 3553970 5324238 Smed_3354 Sinorhizobium medicae WSM419 response regulator receiver protein YP_001329010.1 3552684 D 366394 CDS YP_001329011.1 150398544 5324239 3554032..3555498 1 NC_009636.1 PFAM: type II secretion system protein E; KEGG: sme:SMc02820 putative pilus assembly protein; type II secretion system protein E 3555498 5324239 Smed_3355 Sinorhizobium medicae WSM419 type II secretion system protein E YP_001329011.1 3554032 D 366394 CDS YP_001329012.1 150398545 5324240 3555560..3556570 1 NC_009636.1 PFAM: type II secretion system protein; KEGG: sme:SMc02821 hypothetical protein; type II secretion system protein 3556570 5324240 Smed_3356 Sinorhizobium medicae WSM419 type II secretion system protein YP_001329012.1 3555560 D 366394 CDS YP_001329013.1 150398546 5324241 3556584..3557567 1 NC_009636.1 PFAM: type II secretion system protein; KEGG: sme:SMc02822 hypothetical protein; type II secretion system protein 3557567 5324241 Smed_3357 Sinorhizobium medicae WSM419 type II secretion system protein YP_001329013.1 3556584 D 366394 CDS YP_001329014.1 150398547 5324242 complement(3557846..3558661) 1 NC_009636.1 PFAM: Tetratricopeptide TPR_4; KEGG: sme:SMc02824 hypothetical protein; hypothetical protein 3558661 5324242 Smed_3358 Sinorhizobium medicae WSM419 hypothetical protein YP_001329014.1 3557846 R 366394 CDS YP_001329015.1 150398548 5324243 3558798..3560195 1 NC_009636.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sme:SMc02825 putative aminopeptidase protein; leucyl aminopeptidase 3560195 5324243 Smed_3359 Sinorhizobium medicae WSM419 leucyl aminopeptidase YP_001329015.1 3558798 D 366394 CDS YP_001329016.1 150398549 5324244 3560268..3560612 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc02826 putative transcription regulator protein; MarR family transcriptional regulator 3560612 5324244 Smed_3360 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001329016.1 3560268 D 366394 CDS YP_001329017.1 150398550 5324245 3560609..3561475 1 NC_009636.1 PFAM: NLP/P60 protein; KEGG: sme:SMc02827 hypothetical protein; NLP/P60 protein 3561475 5324245 Smed_3361 Sinorhizobium medicae WSM419 NLP/P60 protein YP_001329017.1 3560609 D 366394 CDS YP_001329018.1 150398551 5324246 complement(3561585..3562544) 1 NC_009636.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc02828 putative hydroxyacid dehydrogenase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3562544 5324246 Smed_3362 Sinorhizobium medicae WSM419 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001329018.1 3561585 R 366394 CDS YP_001329019.1 150398552 5324247 complement(3562556..3564184) 1 NC_009636.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sme:SMc02829 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3564184 5324247 Smed_3363 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001329019.1 3562556 R 366394 CDS YP_001329020.1 150398553 5324248 complement(3564193..3565323) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02830 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3565323 5324248 Smed_3364 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001329020.1 3564193 R 366394 CDS YP_001329021.1 150398554 5324249 complement(3565323..3566405) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02831 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3566405 5324249 Smed_3365 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001329021.1 3565323 R 366394 CDS YP_001329022.1 150398555 5324250 complement(3566586..3568445) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 5; KEGG: sme:SMc02832 putative periplasmic binding protein; extracellular solute-binding protein 3568445 5324250 Smed_3366 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001329022.1 3566586 R 366394 CDS YP_001329023.1 150398556 5324251 3568690..3569757 1 NC_009636.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 3569757 mepA 5324251 mepA Sinorhizobium medicae WSM419 penicillin-insensitive murein endopeptidase YP_001329023.1 3568690 D 366394 CDS YP_001329024.1 150398557 5324252 3570002..3570382 1 NC_009636.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 3570382 mgsA 5324252 mgsA Sinorhizobium medicae WSM419 methylglyoxal synthase YP_001329024.1 3570002 D 366394 CDS YP_001329025.1 150398558 5324253 3570692..3571711 1 NC_009636.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 3571711 glk 5324253 glk Sinorhizobium medicae WSM419 glucokinase YP_001329025.1 3570692 D 366394 CDS YP_001329026.1 150398559 5324254 3571820..3573625 1 NC_009636.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02836 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3573625 5324254 Smed_3370 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001329026.1 3571820 D 366394 CDS YP_001329027.1 150398560 5324255 3573660..3574478 1 NC_009636.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3574478 5324255 Smed_3371 Sinorhizobium medicae WSM419 dihydrodipicolinate reductase YP_001329027.1 3573660 D 366394 CDS YP_001329028.1 150398561 5324256 3574506..3575141 1 NC_009636.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 3575141 5324256 Smed_3372 Sinorhizobium medicae WSM419 phosphoglyceromutase YP_001329028.1 3574506 D 366394 CDS YP_001329029.1 150398562 5324257 complement(3575288..3576160) 1 NC_009636.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sme:SMc02841 putative methylated-DNA--protein-cysteine methyltransferase transcription regulator; methylated-DNA--protein-cysteine methyltransferase 3576160 5324257 Smed_3373 Sinorhizobium medicae WSM419 methylated-DNA--protein-cysteine methyltransferase YP_001329029.1 3575288 R 366394 CDS YP_001329030.1 150398563 5324258 complement(3576240..3576737) 1 NC_009636.1 KEGG: sme:SMc02842 hypothetical protein; hypothetical protein 3576737 5324258 Smed_3374 Sinorhizobium medicae WSM419 hypothetical protein YP_001329030.1 3576240 R 366394 CDS YP_001329031.1 150398564 5324259 3576850..3577560 1 NC_009636.1 TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sme:SMc02843 probable endonuclease III protein; endonuclease III 3577560 5324259 Smed_3375 Sinorhizobium medicae WSM419 endonuclease III YP_001329031.1 3576850 D 366394 CDS YP_001329032.1 150398565 5324260 complement(3577621..3578214) 1 NC_009636.1 PFAM: regulatory protein TetR; KEGG: sme:SMc02844 putative transcription regulator protein; TetR family transcriptional regulator 3578214 5324260 Smed_3376 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001329032.1 3577621 R 366394 CDS YP_001329033.1 150398566 5324261 3578283..3578708 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc02845 putative antibiotic resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 3578708 5324261 Smed_3377 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001329033.1 3578283 D 366394 CDS YP_001329034.1 150398567 5324262 3578835..3579827 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc02846 putative sugar kinase protein; ribokinase-like domain-containing protein 3579827 5324262 Smed_3378 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001329034.1 3578835 D 366394 CDS YP_001329035.1 150398568 5324263 complement(3579975..3580526) 1 NC_009636.1 PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sme:SMc02848 hypothetical protein; hypothetical protein 3580526 5324263 Smed_3379 Sinorhizobium medicae WSM419 hypothetical protein YP_001329035.1 3579975 R 366394 CDS YP_001329036.1 150398569 5324264 3580661..3581734 1 NC_009636.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sme:SMc02849 2-hydroxyacid dehydrogenase; glyoxylate reductase 3581734 5324264 Smed_3380 Sinorhizobium medicae WSM419 glyoxylate reductase YP_001329036.1 3580661 D 366394 CDS YP_001329037.1 150398570 5324265 complement(3581962..3584976) 1 NC_009636.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 3584976 5324265 Smed_3381 Sinorhizobium medicae WSM419 DNA polymerase I YP_001329037.1 3581962 R 366394 CDS YP_001329038.1 150398571 5324266 3585430..3585873 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc02851 putative transcription regulator protein; MarR family transcriptional regulator 3585873 5324266 Smed_3382 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001329038.1 3585430 D 366394 CDS YP_001329039.1 150398572 5324267 3585956..3587347 1 NC_009636.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sme:SMc02852 hypothetical protein; hypothetical protein 3587347 5324267 Smed_3383 Sinorhizobium medicae WSM419 hypothetical protein YP_001329039.1 3585956 D 366394 CDS YP_001329040.1 150398573 5324268 3587713..3588660 1 NC_009636.1 KEGG: sme:SMc02853 hypothetical transmembrane protein; hypothetical protein 3588660 5324268 Smed_3384 Sinorhizobium medicae WSM419 hypothetical protein YP_001329040.1 3587713 D 366394 CDS YP_001329041.1 150398574 5324269 complement(3588712..3589203) 1 NC_009636.1 KEGG: sme:SMc02854 hypothetical signal peptide protein; putative signal peptide protein 3589203 5324269 Smed_3385 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001329041.1 3588712 R 366394 CDS YP_001329042.1 150398575 5324270 complement(3589318..3590205) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc02855 hypothetical protein; hypothetical protein 3590205 5324270 Smed_3386 Sinorhizobium medicae WSM419 hypothetical protein YP_001329042.1 3589318 R 366394 CDS YP_001329043.1 150398576 5324271 complement(3590494..3590925) 1 NC_009636.1 PFAM: Pyrimidine dimer DNA glycosylase; KEGG: bmb:BruAb2_0604 endonuclease V; pyrimidine dimer DNA glycosylase 3590925 5324271 Smed_3387 Sinorhizobium medicae WSM419 pyrimidine dimer DNA glycosylase YP_001329043.1 3590494 R 366394 CDS YP_001329044.1 150398577 5324272 3591205..3593457 1 NC_009636.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sme:SMc02856 putative penicillin-binding protein; 1A family penicillin-binding protein 3593457 5324272 Smed_3388 Sinorhizobium medicae WSM419 1A family penicillin-binding protein YP_001329044.1 3591205 D 366394 CDS YP_001329045.1 150398578 5324273 3593690..3595615 1 NC_009636.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3595615 dnaK 5324273 dnaK Sinorhizobium medicae WSM419 molecular chaperone DnaK YP_001329045.1 3593690 D 366394 CDS YP_001329046.1 150398579 5324274 3595879..3597006 1 NC_009636.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 3597006 5324274 Smed_3390 Sinorhizobium medicae WSM419 chaperone protein DnaJ YP_001329046.1 3595879 D 366394 CDS YP_001329047.1 150398580 5324275 complement(3597180..3598046) 1 NC_009636.1 KEGG: sme:SMc02859 hypothetical protein; hypothetical protein 3598046 5324275 Smed_3391 Sinorhizobium medicae WSM419 hypothetical protein YP_001329047.1 3597180 R 366394 CDS YP_001329048.1 150398581 5324276 complement(3598050..3598685) 1 NC_009636.1 PFAM: protein of unknown function DUF1326; KEGG: sme:SMc02860 hypothetical protein; hypothetical protein 3598685 5324276 Smed_3392 Sinorhizobium medicae WSM419 hypothetical protein YP_001329048.1 3598050 R 366394 CDS YP_001329049.1 150398582 5324277 complement(3598801..3599805) 1 NC_009636.1 PFAM: phosphate transporter; KEGG: sme:SMc02861 phosphate transport transmembrane protein; phosphate transporter 3599805 5324277 Smed_3393 Sinorhizobium medicae WSM419 phosphate transporter YP_001329049.1 3598801 R 366394 CDS YP_001329050.1 150398583 5324278 complement(3599805..3600449) 1 NC_009636.1 PFAM: protein of unknown function DUF47; KEGG: sme:SMc02862 PIT accessory protein; hypothetical protein 3600449 5324278 Smed_3394 Sinorhizobium medicae WSM419 hypothetical protein YP_001329050.1 3599805 R 366394 CDS YP_001329051.1 150398584 5324279 3600571..3601800 1 NC_009636.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3601800 recF 5324279 recF Sinorhizobium medicae WSM419 recombination protein F YP_001329051.1 3600571 D 366394 CDS YP_001329052.1 150398585 5324280 3601840..3602616 1 NC_009636.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 3602616 5324280 Smed_3396 Sinorhizobium medicae WSM419 molybdopterin biosynthesis protein MoeB YP_001329052.1 3601840 D 366394 CDS YP_001329053.1 150398586 5324281 complement(3602662..3603330) 1 NC_009636.1 PFAM: regulatory protein TetR; Tetracycline transcriptional repressor MAATS-type domain protein; KEGG: sme:SMc02866 putative transcription regulator protein; TetR family transcriptional regulator 3603330 5324281 Smed_3397 Sinorhizobium medicae WSM419 TetR family transcriptional regulator YP_001329053.1 3602662 R 366394 CDS YP_001329054.1 150398587 5324282 complement(3603392..3606538) 1 NC_009636.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sme:SMc02867 putative multidrug-efflux system transmembrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3606538 5324282 Smed_3398 Sinorhizobium medicae WSM419 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001329054.1 3603392 R 366394 CDS YP_001329055.1 150398588 5324283 complement(3606549..3607769) 1 NC_009636.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sme:SMc02868 putative multidrug efflux system protein; RND family efflux transporter MFP subunit 3607769 5324283 Smed_3399 Sinorhizobium medicae WSM419 RND family efflux transporter MFP subunit YP_001329055.1 3606549 R 366394 CDS YP_001329056.1 150398589 5324284 complement(3608140..3609150) 1 NC_009636.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc02869 putative ATP-binding ABC transporter protein; ABC transporter-like protein 3609150 5324284 Smed_3400 Sinorhizobium medicae WSM419 ABC transporter-like protein YP_001329056.1 3608140 R 366394 CDS YP_001329057.1 150398590 5324285 complement(3609167..3610231) 1 NC_009636.1 PFAM: oxidoreductase domain protein; KEGG: sme:SMc02870 putative oxidoreductase protein; oxidoreductase domain-containing protein 3610231 5324285 Smed_3401 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001329057.1 3609167 R 366394 CDS YP_001329058.1 150398591 5324286 complement(3610228..3611067) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02871 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3611067 5324286 Smed_3402 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001329058.1 3610228 R 366394 CDS YP_001329059.1 150398592 5324287 complement(3611080..3612027) 1 NC_009636.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02872 putative permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3612027 5324287 Smed_3403 Sinorhizobium medicae WSM419 binding-protein-dependent transport system inner membrane protein YP_001329059.1 3611080 R 366394 CDS YP_001329060.1 150398593 5324288 complement(3612045..3612239) 1 NC_009636.1 hypothetical protein 3612239 5324288 Smed_3404 Sinorhizobium medicae WSM419 hypothetical protein YP_001329060.1 3612045 R 366394 CDS YP_001329061.1 150398594 5324289 complement(3612265..3613524) 1 NC_009636.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc02873 putative periplasmic binding (signal peptide) ABC transporter protein; extracellular solute-binding protein 3613524 5324289 Smed_3405 Sinorhizobium medicae WSM419 extracellular solute-binding protein YP_001329061.1 3612265 R 366394 CDS YP_001329062.1 150398595 5324290 complement(3613582..3614478) 1 NC_009636.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 3614478 murQ 5324290 murQ Sinorhizobium medicae WSM419 N-acetylmuramic acid 6-phosphate etherase YP_001329062.1 3613582 R 366394 CDS YP_001329063.1 150398596 5324291 3614676..3615560 1 NC_009636.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sme:SMc02875 hypothetical protein; BadF/BadG/BcrA/BcrD type ATPase 3615560 5324291 Smed_3407 Sinorhizobium medicae WSM419 BadF/BadG/BcrA/BcrD type ATPase YP_001329063.1 3614676 D 366394 CDS YP_001329064.1 150398597 5324292 3615557..3616321 1 NC_009636.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02876 putative transcription regulator protein; GntR family transcriptional regulator 3616321 5324292 Smed_3408 Sinorhizobium medicae WSM419 GntR family transcriptional regulator YP_001329064.1 3615557 D 366394 CDS YP_001329065.1 150398598 5324293 3616361..3617386 1 NC_009636.1 PFAM: sugar isomerase (SIS); KEGG: sme:SMc02877 putative glucosamine-6-phosphate isomerase; glutamine--fructose-6-phosphate transaminase 3617386 5324293 Smed_3409 Sinorhizobium medicae WSM419 glutamine--fructose-6-phosphate transaminase YP_001329065.1 3616361 D 366394 CDS YP_001329066.1 150398599 5324294 3617383..3618543 1 NC_009636.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: sme:SMc02878 probable N-acetylglucosamine-6-phosphate deacetylase protein; N-acetylglucosamine-6-phosphate deacetylase 3618543 5324294 Smed_3410 Sinorhizobium medicae WSM419 N-acetylglucosamine-6-phosphate deacetylase YP_001329066.1 3617383 D 366394 CDS YP_001329067.1 150398600 5324295 complement(3618646..3619383) 1 NC_009636.1 PFAM: CutC family protein; KEGG: sme:SMc02879 copper homeostasis protein; CutC family protein 3619383 5324295 Smed_3411 Sinorhizobium medicae WSM419 CutC family protein YP_001329067.1 3618646 R 366394 CDS YP_001329068.1 150398601 5324296 complement(3619380..3620291) 1 NC_009636.1 PFAM: ROK family protein; KEGG: sme:SMc02880 hypothetical protein; ROK family protein 3620291 5324296 Smed_3412 Sinorhizobium medicae WSM419 ROK family protein YP_001329068.1 3619380 R 366394 CDS YP_001329069.1 150398602 5324297 complement(3620288..3621649) 1 NC_009636.1 PFAM: Amidase; KEGG: sme:SMc02881 putative amidase protein; hypothetical protein 3621649 5324297 Smed_3413 Sinorhizobium medicae WSM419 hypothetical protein YP_001329069.1 3620288 R 366394 CDS YP_001329070.1 150398603 5324298 3621988..3622740 1 NC_009636.1 putative role in sulfur assimilation; CysZ-like protein 3622740 5324298 Smed_3414 Sinorhizobium medicae WSM419 CysZ-like protein YP_001329070.1 3621988 D 366394 CDS YP_001329071.1 150398604 5324299 3622949..3623158 1 NC_009636.1 PFAM: SlyX family protein; KEGG: sme:SMc02883 slyX protein, putative; hypothetical protein 3623158 5324299 Smed_3415 Sinorhizobium medicae WSM419 hypothetical protein YP_001329071.1 3622949 D 366394 CDS YP_001329072.1 150398605 5324300 complement(3623232..3624224) 1 NC_009636.1 PFAM: basic membrane lipoprotein; KEGG: sme:SMc02884 putative lipoprotein PRECURSOR; basic membrane lipoprotein 3624224 5324300 Smed_3416 Sinorhizobium medicae WSM419 basic membrane lipoprotein YP_001329072.1 3623232 R 366394 CDS YP_001329073.1 150398606 5324301 complement(3624476..3625129) 1 NC_009636.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 3625129 5324301 Smed_3417 Sinorhizobium medicae WSM419 methionine sulfoxide reductase A YP_001329073.1 3624476 R 366394 CDS YP_001329074.1 150398607 5324302 complement(3625188..3625505) 1 NC_009636.1 KEGG: sme:SMc02886 conserved hypothetical signal peptide protein; putative signal peptide protein 3625505 5324302 Smed_3418 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001329074.1 3625188 R 366394 CDS YP_001329075.1 150398608 5324307 3627958..3628872 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02893 putative transcription regulator protein; LysR family transcriptional regulator 3628872 5324307 Smed_3422 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001329075.1 3627958 D 366394 CDS YP_001329076.1 150398609 5324308 complement(3628907..3629266) 1 NC_009636.1 PFAM: transport-associated; KEGG: sme:SMc02894 hypothetical protein; transport-associated protein 3629266 5324308 Smed_3423 Sinorhizobium medicae WSM419 transport-associated protein YP_001329076.1 3628907 R 366394 CDS YP_001329077.1 150398610 5324309 3629371..3630315 1 NC_009636.1 PFAM: Auxin Efflux Carrier; KEGG: sme:SMc02895 hypothetical transmembrane protein; auxin efflux carrier 3630315 5324309 Smed_3424 Sinorhizobium medicae WSM419 auxin efflux carrier YP_001329077.1 3629371 D 366394 CDS YP_001329078.1 150398611 5324310 complement(3630346..3631443) 1 NC_009636.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3631443 5324310 Smed_3425 Sinorhizobium medicae WSM419 branched-chain amino acid aminotransferase YP_001329078.1 3630346 R 366394 CDS YP_001329079.1 150398612 5324311 complement(3631742..3632533) 1 NC_009636.1 PFAM: cytochrome c class I; KEGG: sme:SMc02897 putative cytochrome c transmembrane protein; cytochrome c class I 3632533 5324311 Smed_3426 Sinorhizobium medicae WSM419 cytochrome c class I YP_001329079.1 3631742 R 366394 CDS YP_001329080.1 150398613 5324312 3632689..3633441 1 NC_009636.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 3633441 5324312 Smed_3427 Sinorhizobium medicae WSM419 3-deoxy-manno-octulosonate cytidylyltransferase YP_001329080.1 3632689 D 366394 CDS YP_001329081.1 150398614 5324313 3633467..3634321 1 NC_009636.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 3634321 5324313 Smed_3428 Sinorhizobium medicae WSM419 prephenate dehydratase YP_001329081.1 3633467 D 366394 CDS YP_001329082.1 150398615 5324314 3634672..3634809 1 NC_009636.1 PFAM: protein of unknown function DUF1127; KEGG: sme:SMc02900 hypothetical protein; hypothetical protein 3634809 5324314 Smed_3429 Sinorhizobium medicae WSM419 hypothetical protein YP_001329082.1 3634672 D 366394 CDS YP_001329083.1 150398616 5324315 complement(3634952..3635932) 1 NC_009636.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: sme:SMc02903 putative NADH pyrophosphatase; NUDIX hydrolase 3635932 5324315 Smed_3430 Sinorhizobium medicae WSM419 NUDIX hydrolase YP_001329083.1 3634952 R 366394 CDS YP_001329084.1 150398617 5324316 complement(3635935..3636339) 1 NC_009636.1 PFAM: histidine triad (HIT) protein; KEGG: sme:SMc02904 hypothetical protein; histidine triad (HIT) protein 3636339 5324316 Smed_3431 Sinorhizobium medicae WSM419 histidine triad (HIT) protein YP_001329084.1 3635935 R 366394 CDS YP_001329085.1 150398618 5324318 3636635..3638512 1 NC_009636.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 3638512 5324318 Smed_3432 Sinorhizobium medicae WSM419 DNA polymerase III subunits gamma and tau YP_001329085.1 3636635 D 366394 CDS YP_001329086.1 150398619 5324319 3638629..3638952 1 NC_009636.1 PFAM: conserved hypothetical protein 103; KEGG: sme:SMc02906 conserved hypothetical protein; hypothetical protein 3638952 5324319 Smed_3433 Sinorhizobium medicae WSM419 hypothetical protein YP_001329086.1 3638629 D 366394 CDS YP_001329087.1 150398620 5324320 3639042..3639653 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc02907 putative amino acid efflux transmembrane protein; lysine exporter protein LysE/YggA 3639653 5324320 Smed_3434 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001329087.1 3639042 D 366394 CDS YP_001329088.1 150398621 5324321 3639751..3640356 1 NC_009636.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 3640356 recR 5324321 recR Sinorhizobium medicae WSM419 recombination protein RecR YP_001329088.1 3639751 D 366394 CDS YP_001329089.1 150398622 5324322 3640392..3641630 1 NC_009636.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sme:SMc02909 putative transglycosylase transmembrane protein; lytic murein transglycosylase 3641630 5324322 Smed_3436 Sinorhizobium medicae WSM419 lytic murein transglycosylase YP_001329089.1 3640392 D 366394 CDS YP_001329090.1 150398623 5324323 complement(3641836..3643491) 1 NC_009636.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: sme:SMc02910 putative transport transmembrane protein; hypothetical protein 3643491 5324323 Smed_3437 Sinorhizobium medicae WSM419 hypothetical protein YP_001329090.1 3641836 R 366394 CDS YP_001329091.1 150398624 5324324 3643702..3644319 1 NC_009636.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 3644319 5324324 Smed_3438 Sinorhizobium medicae WSM419 hypothetical protein YP_001329091.1 3643702 D 366394 CDS YP_001329092.1 150398625 5324325 3644337..3645995 1 NC_009636.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3645995 nusA 5324325 nusA Sinorhizobium medicae WSM419 transcription elongation factor NusA YP_001329092.1 3644337 D 366394 CDS YP_001329093.1 150398626 5324326 3646001..3646723 1 NC_009636.1 PFAM: protein of unknown function DUF448; KEGG: sme:SMc02913 hypothetical protein; hypothetical protein 3646723 5324326 Smed_3440 Sinorhizobium medicae WSM419 hypothetical protein YP_001329093.1 3646001 D 366394 CDS YP_001329094.1 150398627 5324327 3646829..3649486 1 NC_009636.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3649486 infB 5324327 infB Sinorhizobium medicae WSM419 translation initiation factor IF-2 YP_001329094.1 3646829 D 366394 CDS YP_001329095.1 150398628 5324328 3649659..3650063 1 NC_009636.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3650063 rbfA 5324328 rbfA Sinorhizobium medicae WSM419 ribosome-binding factor A YP_001329095.1 3649659 D 366394 CDS YP_001329096.1 150398629 5324329 3650075..3651007 1 NC_009636.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3651007 truB 5324329 truB Sinorhizobium medicae WSM419 tRNA pseudouridine synthase B YP_001329096.1 3650075 D 366394 CDS YP_001329097.1 150398630 5324330 3651152..3652870 1 NC_009636.1 PFAM: HWE histidine kinase; KEGG: sme:SMc00322 hypothetical protein; signal transduction histidine kinase 3652870 5324330 Smed_3444 Sinorhizobium medicae WSM419 signal transduction histidine kinase YP_001329097.1 3651152 D 366394 CDS YP_001329098.1 150398631 5324331 3653110..3653379 1 NC_009636.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3653379 rpsO 5324331 rpsO Sinorhizobium medicae WSM419 30S ribosomal protein S15 YP_001329098.1 3653110 D 366394 CDS YP_001329099.1 150398632 5324332 3653754..3655898 1 NC_009636.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; SMART: KH domain protein; KEGG: sme:SMc00324 probable polyribonucleotide nucleotidyltransferase protein; polynucleotide phosphorylase/polyadenylase 3655898 5324332 Smed_3446 Sinorhizobium medicae WSM419 polynucleotide phosphorylase/polyadenylase YP_001329099.1 3653754 D 366394 CDS YP_001329100.1 150398633 5324333 3656090..3657106 1 NC_009636.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: sme:SMc00325 hypothetical protein; methyltransferase small 3657106 5324333 Smed_3447 Sinorhizobium medicae WSM419 methyltransferase small YP_001329100.1 3656090 D 366394 CDS YP_001329101.1 150398634 5324334 complement(3657262..3658068) 1 NC_009636.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 3658068 5324334 Smed_3448 Sinorhizobium medicae WSM419 enoyl-ACP reductase YP_001329101.1 3657262 R 366394 CDS YP_001329102.1 150398635 5324335 complement(3658073..3659293) 1 NC_009636.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 3659293 5324335 Smed_3449 Sinorhizobium medicae WSM419 3-oxoacyl-ACP synthase YP_001329102.1 3658073 R 366394 CDS YP_001329103.1 150398636 5324336 complement(3659342..3659857) 1 NC_009636.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 3659857 5324336 Smed_3450 Sinorhizobium medicae WSM419 3-hydroxydecanoyl-ACP dehydratase YP_001329103.1 3659342 R 366394 CDS YP_001329104.1 150398637 5324337 3660338..3660760 1 NC_009636.1 PFAM: ferric-uptake regulator; KEGG: sme:SMc00329 putative iron response regulator protein; ferric uptake regulator family protein 3660760 5324337 Smed_3451 Sinorhizobium medicae WSM419 ferric uptake regulator family protein YP_001329104.1 3660338 D 366394 CDS YP_001329105.1 150398638 5324338 complement(3660796..3661431) 1 NC_009636.1 PFAM: protein of unknown function UPF0126; KEGG: sme:SMc00330 putative transmembrane protein; hypothetical protein 3661431 5324338 Smed_3452 Sinorhizobium medicae WSM419 hypothetical protein YP_001329105.1 3660796 R 366394 CDS YP_001329106.1 150398639 5324339 complement(3661523..3662311) 1 NC_009636.1 PFAM: protein of unknown function DUF218; KEGG: sme:SMc00331 hypothetical protein; hypothetical protein 3662311 5324339 Smed_3453 Sinorhizobium medicae WSM419 hypothetical protein YP_001329106.1 3661523 R 366394 CDS YP_001329107.1 150398640 5324340 3662448..3662591 1 NC_009636.1 hypothetical protein 3662591 5324340 Smed_3454 Sinorhizobium medicae WSM419 hypothetical protein YP_001329107.1 3662448 D 366394 CDS YP_001329108.1 150398641 5324342 complement(3662981..3663370) 1 NC_009636.1 KEGG: sme:SMc00332 hypothetical protein; hypothetical protein 3663370 5324342 Smed_3455 Sinorhizobium medicae WSM419 hypothetical protein YP_001329108.1 3662981 R 366394 CDS YP_001329109.1 150398642 5324343 3663656..3665026 1 NC_009636.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 3665026 5324343 Smed_3456 Sinorhizobium medicae WSM419 3-phosphoshikimate 1-carboxyvinyltransferase YP_001329109.1 3663656 D 366394 CDS YP_001329110.1 150398643 5324344 3665023..3665661 1 NC_009636.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 3665661 cmk 5324344 cmk Sinorhizobium medicae WSM419 cytidylate kinase YP_001329110.1 3665023 D 366394 CDS YP_001329111.1 150398644 5324345 3665828..3667534 1 NC_009636.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3667534 rpsA 5324345 rpsA Sinorhizobium medicae WSM419 30S ribosomal protein S1 YP_001329111.1 3665828 D 366394 CDS YP_001329112.1 150398645 5324346 complement(3667656..3669221) 1 NC_009636.1 KEGG: sme:SMc00336 hypothetical protein; hypothetical protein 3669221 5324346 Smed_3459 Sinorhizobium medicae WSM419 hypothetical protein YP_001329112.1 3667656 R 366394 CDS YP_001329113.1 150398646 5324347 3669365..3669697 1 NC_009636.1 KEGG: sme:SMc00337 hypothetical/unknown protein; hypothetical protein 3669697 5324347 Smed_3460 Sinorhizobium medicae WSM419 hypothetical protein YP_001329113.1 3669365 D 366394 CDS YP_001329114.1 150398647 5324348 complement(3669757..3670290) 1 NC_009636.1 KEGG: sme:SMc00338 hypothetical protein; hypothetical protein 3670290 5324348 Smed_3461 Sinorhizobium medicae WSM419 hypothetical protein YP_001329114.1 3669757 R 366394 CDS YP_001329115.1 150398648 5324350 complement(3670822..3672777) 1 NC_009636.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; KEGG: sme:SMc00339 adenylate cyclase 1 protein; putative adenylate/guanylate cyclase 3672777 5324350 Smed_3462 Sinorhizobium medicae WSM419 putative adenylate/guanylate cyclase YP_001329115.1 3670822 R 366394 CDS YP_001329116.1 150398649 5324351 complement(3672959..3673288) 1 NC_009636.1 KEGG: sme:SMc00341 hypothetical protein; hypothetical protein 3673288 5324351 Smed_3463 Sinorhizobium medicae WSM419 hypothetical protein YP_001329116.1 3672959 R 366394 CDS YP_001329117.1 150398650 5324352 3673498..3674124 1 NC_009636.1 PFAM: 3'-5' exonuclease; KEGG: sme:SMc00342 ribonuclease D; 3'-5' exonuclease 3674124 5324352 Smed_3464 Sinorhizobium medicae WSM419 3'-5' exonuclease YP_001329117.1 3673498 D 366394 CDS YP_001329118.1 150398651 5324353 complement(3674164..3674445) 1 NC_009636.1 TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: sme:SMc00345 selenoprotein W-related protein; putative selenoprotein 3674445 5324353 Smed_3465 Sinorhizobium medicae WSM419 putative selenoprotein YP_001329118.1 3674164 R 366394 CDS YP_001329119.1 150398652 5324354 3674651..3675103 1 NC_009636.1 PFAM: DoxX family protein; KEGG: sme:SMc00346 hypothetical protein; DoxX family protein 3675103 5324354 Smed_3466 Sinorhizobium medicae WSM419 DoxX family protein YP_001329119.1 3674651 D 366394 CDS YP_001329120.1 150398653 5324355 complement(3675192..3675599) 1 NC_009636.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 3675599 5324355 Smed_3467 Sinorhizobium medicae WSM419 nucleoside diphosphate kinase regulator YP_001329120.1 3675192 R 366394 CDS YP_001329121.1 150398654 5324356 3675974..3676465 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mmr:Mmar10_0575 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 3676465 5324356 Smed_3468 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001329121.1 3675974 D 366394 CDS YP_001329122.1 150398655 5324357 complement(3676782..3678617) 1 NC_009636.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3678617 5324357 Smed_3469 Sinorhizobium medicae WSM419 GTP-binding protein LepA YP_001329122.1 3676782 R 366394 CDS YP_001329123.1 150398656 5324358 complement(3678667..3679932) 1 NC_009636.1 PFAM: major facilitator superfamily MFS_1; KEGG: sme:SMc00350 putative transport transmembrane protein; major facilitator superfamily transporter 3679932 5324358 Smed_3470 Sinorhizobium medicae WSM419 major facilitator superfamily transporter YP_001329123.1 3678667 R 366394 CDS YP_001329124.1 150398657 5324359 3680109..3680702 1 NC_009636.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sme:SMc00351 hypothetical protein; XRE family transcriptional regulator 3680702 5324359 Smed_3471 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001329124.1 3680109 D 366394 CDS YP_001329125.1 150398658 5324360 3680704..3681225 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00352 putative acetyltransferase protein; N-acetyltransferase GCN5 3681225 5324360 Smed_3472 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001329125.1 3680704 D 366394 CDS YP_001329126.1 150398659 5324361 complement(3681302..3681940) 1 NC_009636.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: sme:SMc00353 putative transmembrane protein; exopolysaccharide synthesis ExoD 3681940 5324361 Smed_3473 Sinorhizobium medicae WSM419 exopolysaccharide synthesis ExoD YP_001329126.1 3681302 R 366394 CDS YP_001329127.1 150398660 5324362 complement(3681953..3682102) 1 NC_009636.1 hypothetical protein 3682102 5324362 Smed_3474 Sinorhizobium medicae WSM419 hypothetical protein YP_001329127.1 3681953 R 366394 CDS YP_001329128.1 150398661 5324363 3682204..3682869 1 NC_009636.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sme:SMc00354 hypothetical protein; OmpA/MotB domain-containing protein 3682869 5324363 Smed_3475 Sinorhizobium medicae WSM419 OmpA/MotB domain-containing protein YP_001329128.1 3682204 D 366394 CDS YP_001329129.1 150398662 5324364 complement(3683187..3684239) 1 NC_009636.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: sme:SMc00355 lysine 2,3-aminomutase; lysine 2,3-aminomutase YodO family protein 3684239 5324364 Smed_3476 Sinorhizobium medicae WSM419 lysine 2,3-aminomutase YodO family protein YP_001329129.1 3683187 R 366394 CDS YP_001329130.1 150398663 5324365 complement(3684236..3685288) 1 NC_009636.1 PFAM: tRNA synthetase class II (D K and N); KEGG: sme:SMc00356 putative lysyl-tRNA synthetase protein; lysine--tRNA ligase 3685288 5324365 Smed_3477 Sinorhizobium medicae WSM419 lysine--tRNA ligase YP_001329130.1 3684236 R 366394 CDS YP_001329131.1 150398664 5324366 3685448..3686017 1 NC_009636.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3686017 5324366 Smed_3478 Sinorhizobium medicae WSM419 elongation factor P YP_001329131.1 3685448 D 366394 CDS YP_001329132.1 150398665 5324367 3686169..3687410 1 NC_009636.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc00358 putative cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase 3687410 5324367 Smed_3479 Sinorhizobium medicae WSM419 cyclopropane-fatty-acyl-phospholipid synthase YP_001329132.1 3686169 D 366394 CDS YP_001329133.1 150398666 5324368 3687495..3688478 1 NC_009636.1 PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: sme:SMc00359 hypothetical protein; rubrerythrin 3688478 5324368 Smed_3480 Sinorhizobium medicae WSM419 rubrerythrin YP_001329133.1 3687495 D 366394 CDS YP_001329134.1 150398667 5324369 complement(3688834..3689454) 1 NC_009636.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: sme:SMc00360 hypothetical protein; transglutaminase 3689454 5324369 Smed_3481 Sinorhizobium medicae WSM419 transglutaminase YP_001329134.1 3688834 R 366394 CDS YP_001329135.1 150398668 5324370 complement(3689739..3690557) 1 NC_009636.1 KEGG: sme:SMc00361 hypothetical protein; hypothetical protein 3690557 5324370 Smed_3482 Sinorhizobium medicae WSM419 hypothetical protein YP_001329135.1 3689739 R 366394 CDS YP_001329136.1 150398669 5324371 3690912..3691310 1 NC_009636.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 3691310 infC 5324371 infC Sinorhizobium medicae WSM419 translation initiation factor IF-3 YP_001329136.1 3690912 D 366394 CDS YP_001329137.1 150398670 5324372 3691607..3691810 1 NC_009636.1 PFAM: ribosomal protein L35; KEGG: sme:SMc00363 50S ribosomal protein L35; 50S ribosomal protein L35 3691810 rpmI 5324372 rpmI Sinorhizobium medicae WSM419 50S ribosomal protein L35 YP_001329137.1 3691607 D 366394 CDS YP_001329138.1 150398671 5324373 3691847..3692251 1 NC_009636.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3692251 rplT 5324373 rplT Sinorhizobium medicae WSM419 50S ribosomal protein L20 YP_001329138.1 3691847 D 366394 CDS YP_001329139.1 150398672 5324374 3692417..3693499 1 NC_009636.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 3693499 pheS 5324374 pheS Sinorhizobium medicae WSM419 phenylalanyl-tRNA synthetase subunit alpha YP_001329139.1 3692417 D 366394 CDS YP_001329140.1 150398673 5324375 3693533..3695959 1 NC_009636.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3695959 pheT 5324375 pheT Sinorhizobium medicae WSM419 phenylalanyl-tRNA synthetase subunit beta YP_001329140.1 3693533 D 366394 CDS YP_001329141.1 150398674 5324376 complement(3696215..3696574) 1 NC_009636.1 KEGG: sme:SMc00367 hypothetical protein; hypothetical protein 3696574 5324376 Smed_3488 Sinorhizobium medicae WSM419 hypothetical protein YP_001329141.1 3696215 R 366394 CDS YP_001329142.1 150398675 5324377 complement(3696726..3697721) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: rle:RL0272 putative aldo-keto reductase/oxidoreductase; aldo/keto reductase 3697721 5324377 Smed_3489 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001329142.1 3696726 R 366394 CDS YP_001329143.1 150398676 5324378 3697899..3698789 1 NC_009636.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00370 putative transcription regulator protein; LysR family transcriptional regulator 3698789 5324378 Smed_3490 Sinorhizobium medicae WSM419 LysR family transcriptional regulator YP_001329143.1 3697899 D 366394 CDS YP_001329144.1 150398677 5324379 complement(3698834..3699325) 1 NC_009636.1 PFAM: protein of unknown function DUF892; KEGG: sme:SMc00371 hypothetical protein; hypothetical protein 3699325 5324379 Smed_3491 Sinorhizobium medicae WSM419 hypothetical protein YP_001329144.1 3698834 R 366394 CDS YP_001329145.1 150398678 5324380 3699548..3700318 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMc00372 short chain dehydrogenase; short chain dehydrogenase 3700318 5324380 Smed_3492 Sinorhizobium medicae WSM419 short chain dehydrogenase YP_001329145.1 3699548 D 366394 CDS YP_001329146.1 150398679 5324381 3700352..3700981 1 NC_009636.1 KEGG: sme:SMc00373 hypothetical/unknown protein; hypothetical protein 3700981 5324381 Smed_3493 Sinorhizobium medicae WSM419 hypothetical protein YP_001329146.1 3700352 D 366394 CDS YP_001329147.1 150398680 5324382 complement(3700997..3701947) 1 NC_009636.1 PFAM: aldo/keto reductase; KEGG: sme:SMc00374 putative oxidoreductase transmembrane protein; aldo/keto reductase 3701947 5324382 Smed_3494 Sinorhizobium medicae WSM419 aldo/keto reductase YP_001329147.1 3700997 R 366394 CDS YP_001329148.1 150398681 5324383 3702162..3703148 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc00375 putative oxidoreductase protein; oxidoreductase domain-containing protein 3703148 5324383 Smed_3495 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001329148.1 3702162 D 366394 CDS YP_001329149.1 150398682 5324384 complement(3703194..3703655) 1 NC_009636.1 KEGG: sme:SMc00376 hypothetical protein; hypothetical protein 3703655 5324384 Smed_3496 Sinorhizobium medicae WSM419 hypothetical protein YP_001329149.1 3703194 R 366394 CDS YP_001329150.1 150398683 5324385 3703732..3704523 1 NC_009636.1 PFAM: helix-turn-helix domain protein; KEGG: sme:SMc00377 hypothetical protein; XRE family transcriptional regulator 3704523 5324385 Smed_3497 Sinorhizobium medicae WSM419 XRE family transcriptional regulator YP_001329150.1 3703732 D 366394 CDS YP_001329151.1 150398684 5324386 3704633..3706213 1 NC_009636.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3706213 xseA 5324386 xseA Sinorhizobium medicae WSM419 exodeoxyribonuclease VII large subunit YP_001329151.1 3704633 D 366394 CDS YP_001329152.1 150398685 5324387 3706213..3706803 1 NC_009636.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sme:SMc00379 putative oxidoreductase protein; NAD(P)H dehydrogenase (quinone) 3706803 5324387 Smed_3499 Sinorhizobium medicae WSM419 NAD(P)H dehydrogenase (quinone) YP_001329152.1 3706213 D 366394 CDS YP_001329153.1 150398686 5324388 complement(3706813..3707307) 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc00380 putative transcription regulator protein; MarR family transcriptional regulator 3707307 5324388 Smed_3500 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001329153.1 3706813 R 366394 CDS YP_001329154.1 150398687 5324389 3707421..3708296 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00381 hypothetical protein; hypothetical protein 3708296 5324389 Smed_3501 Sinorhizobium medicae WSM419 hypothetical protein YP_001329154.1 3707421 D 366394 CDS YP_001329155.1 150398688 5324390 3708455..3709117 1 NC_009636.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: sme:SMc04051 putative RNA polymerase sigma-E factor (sigma-24) protein; ECF subfamily RNA polymerase sigma-24 factor 3709117 5324390 Smed_3502 Sinorhizobium medicae WSM419 ECF subfamily RNA polymerase sigma-24 factor YP_001329155.1 3708455 D 366394 CDS YP_001329156.1 150398689 5324391 3709107..3709505 1 NC_009636.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: eli:ELI_09040 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3709505 5324391 Smed_3503 Sinorhizobium medicae WSM419 glyoxalase/bleomycin resistance protein/dioxygenase YP_001329156.1 3709107 D 366394 CDS YP_001329157.1 150398690 5324392 complement(3709638..3710894) 1 NC_009636.1 PFAM: peptidase M29 aminopeptidase II; KEGG: sme:SMc00382 probable aminopeptidase protein; peptidase M29 aminopeptidase II 3710894 5324392 Smed_3504 Sinorhizobium medicae WSM419 peptidase M29 aminopeptidase II YP_001329157.1 3709638 R 366394 CDS YP_001329158.1 150398691 5324393 complement(3710966..3711655) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00383 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3711655 5324393 Smed_3505 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001329158.1 3710966 R 366394 CDS YP_001329159.1 150398692 5324394 3711677..3712186 1 NC_009636.1 PFAM: regulatory protein MarR; KEGG: sme:SMc00384 putative transcription regulation protein; MarR family transcriptional regulator 3712186 5324394 Smed_3506 Sinorhizobium medicae WSM419 MarR family transcriptional regulator YP_001329159.1 3711677 D 366394 CDS YP_001329160.1 150398693 5324395 complement(3712206..3712679) 1 NC_009636.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sme:SMc00385 hypothetical protein; ybaK/ebsC protein 3712679 5324395 Smed_3507 Sinorhizobium medicae WSM419 ybaK/ebsC protein YP_001329160.1 3712206 R 366394 CDS YP_001329161.1 150398694 5324396 complement(3712683..3713033) 1 NC_009636.1 PFAM: arsenate reductase and related; KEGG: sme:SMc00386 hypothetical protein; arsenate reductase-like protein 3713033 5324396 Smed_3508 Sinorhizobium medicae WSM419 arsenate reductase-like protein YP_001329161.1 3712683 R 366394 CDS YP_001329162.1 150398695 5324397 complement(3713117..3714286) 1 NC_009636.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 3714286 5324397 Smed_3509 Sinorhizobium medicae WSM419 aromatic amino acid aminotransferase YP_001329162.1 3713117 R 366394 CDS YP_001329163.1 150398696 5324398 complement(3714384..3715445) 1 NC_009636.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sme:SMc00388 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 3715445 5324398 Smed_3510 Sinorhizobium medicae WSM419 succinylglutamate desuccinylase/aspartoacylase YP_001329163.1 3714384 R 366394 CDS YP_001329164.1 150398697 5324399 complement(3716016..3716432) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: ret:RHE_CH01077 hypothetical protein; glutathione-dependent formaldehyde-activating protein 3716432 5324399 Smed_3511 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001329164.1 3716016 R 366394 CDS YP_001329165.1 150398698 5324400 complement(3716480..3716944) 1 NC_009636.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ret:RHE_CH01078 hypothetical protein; activator of Hsp90 ATPase 1 family protein 3716944 5324400 Smed_3512 Sinorhizobium medicae WSM419 activator of Hsp90 ATPase 1 family protein YP_001329165.1 3716480 R 366394 CDS YP_001329166.1 150398699 5324401 complement(3716941..3717270) 1 NC_009636.1 PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH01079 probable transcriptional regulator protein, ArsR family; regulatory protein ArsR 3717270 5324401 Smed_3513 Sinorhizobium medicae WSM419 regulatory protein ArsR YP_001329166.1 3716941 R 366394 CDS YP_001329167.1 150398700 5324402 3717420..3718565 1 NC_009636.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: sme:SMc01712 putative L-lactate dehydrogenase (cytochrome) protein; FMN-dependent alpha-hydroxy acid dehydrogenase 3718565 5324402 Smed_3514 Sinorhizobium medicae WSM419 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001329167.1 3717420 D 366394 CDS YP_001329168.1 150398701 5324405 complement(3719416..3720978) 1 NC_009636.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3720978 guaA 5324405 guaA Sinorhizobium medicae WSM419 GMP synthase YP_001329168.1 3719416 R 366394 CDS YP_001329169.1 150398702 5324406 complement(3721085..3721723) 1 NC_009636.1 Enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3721723 5324406 Smed_3518 Sinorhizobium medicae WSM419 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001329169.1 3721085 R 366394 CDS YP_001329170.1 150398703 5324407 complement(3721720..3722229) 1 NC_009636.1 PFAM: thioesterase superfamily protein; KEGG: sme:SMc00396 hypothetical protein; thioesterase superfamily protein 3722229 5324407 Smed_3519 Sinorhizobium medicae WSM419 thioesterase superfamily protein YP_001329170.1 3721720 R 366394 CDS YP_001329171.1 150398704 5324408 complement(3722251..3722784) 1 NC_009636.1 PFAM: TspO/MBR family protein; KEGG: atc:AGR_C_485 mitochondrial benzodiazepine receptor/sensory transduction protein; TspO and MBR-like protein 3722784 5324408 Smed_3520 Sinorhizobium medicae WSM419 TspO and MBR-like protein YP_001329171.1 3722251 R 366394 CDS YP_001329172.1 150398705 5324409 3722866..3723414 1 NC_009636.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMc00397 hypothetical protein; N-acetyltransferase GCN5 3723414 5324409 Smed_3521 Sinorhizobium medicae WSM419 N-acetyltransferase GCN5 YP_001329172.1 3722866 D 366394 CDS YP_001329173.1 150398706 5324410 complement(3723366..3724499) 1 NC_009636.1 PFAM: uncharacterised conserved protein UCP028101; KEGG: sme:SMc00460 hypothetical protein; hypothetical protein 3724499 5324410 Smed_3522 Sinorhizobium medicae WSM419 hypothetical protein YP_001329173.1 3723366 R 366394 CDS YP_001329174.1 150398707 5324411 3725274..3726920 1 NC_009636.1 PFAM: surface antigen variable number repeat protein; Polypeptide-transport-associated domain protein ShlB-type; KEGG: mag:amb3772 hemolysin activation/secretion protein; polypeptide-transport-associated domain-containing protein 3726920 5324411 Smed_3523 Sinorhizobium medicae WSM419 polypeptide-transport-associated domain-containing protein YP_001329174.1 3725274 D 366394 CDS YP_001329175.1 150398708 5324412 3727030..3728475 1 NC_009636.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: mag:amb3773 large exoprotein involved in heme utilization or adhesion; filamentous hemagglutinin outer membrane protein 3728475 5324412 Smed_3524 Sinorhizobium medicae WSM419 filamentous hemagglutinin outer membrane protein YP_001329175.1 3727030 D 366394 CDS YP_001329176.1 150398709 5324413 3728785..3733803 1 NC_009636.1 SMART: Parallel beta-helix repeat; Integrin alpha beta-propellor repeat protein; KEGG: dps:DP1520 hypothetical protein; alpha/beta hydrolase domain-containing protein 3733803 5324413 Smed_3525 Sinorhizobium medicae WSM419 alpha/beta hydrolase domain-containing protein YP_001329176.1 3728785 D 366394 CDS YP_001329177.1 150398710 5324414 3733954..3734562 1 NC_009636.1 PFAM: Invasion associated locus B family protein; KEGG: mlo:mll2844 invasion-like protein; invasion associated locus B family protein 3734562 5324414 Smed_3526 Sinorhizobium medicae WSM419 invasion associated locus B family protein YP_001329177.1 3733954 D 366394 CDS YP_001329178.1 150398711 5324415 complement(3734626..3735759) 1 NC_009636.1 KEGG: sme:SMc00400 hypothetical signal peptide protein; putative signal peptide protein 3735759 5324415 Smed_3527 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001329178.1 3734626 R 366394 CDS YP_001329179.1 150398712 5324416 complement(3735759..3737312) 1 NC_009636.1 PFAM: protein of unknown function DUF1111; KEGG: sme:SMc00401 hypothetical protein; hypothetical protein 3737312 5324416 Smed_3528 Sinorhizobium medicae WSM419 hypothetical protein YP_001329179.1 3735759 R 366394 CDS YP_001329180.1 150398713 5324417 complement(3737358..3738638) 1 NC_009636.1 KEGG: sme:SMc00402 putative iron-regulated protein; putative iron-regulated protein 3738638 5324417 Smed_3529 Sinorhizobium medicae WSM419 putative iron-regulated protein YP_001329180.1 3737358 R 366394 CDS YP_001329181.1 150398714 5324418 complement(3738783..3740072) 1 NC_009636.1 PFAM: Fmu (Sun) domain protein; KEGG: sme:SMc00403 hypothetical NOL1/NOP2/SUN family signature protein; Fmu (Sun) domain-containing protein 3740072 5324418 Smed_3530 Sinorhizobium medicae WSM419 Fmu (Sun) domain-containing protein YP_001329181.1 3738783 R 366394 CDS YP_001329182.1 150398715 5324419 complement(3740205..3740579) 1 NC_009636.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: sme:SMc00404 putative rare lipoprotein A; rare lipoprotein A 3740579 5324419 Smed_3531 Sinorhizobium medicae WSM419 rare lipoprotein A YP_001329182.1 3740205 R 366394 CDS YP_001329183.1 150398716 5324420 complement(3740764..3740937) 1 NC_009636.1 hypothetical protein 3740937 5324420 Smed_3532 Sinorhizobium medicae WSM419 hypothetical protein YP_001329183.1 3740764 R 366394 CDS YP_001329184.1 150398717 5324421 complement(3741041..3741916) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: sme:SMc00405 hypothetical protein; NAD-dependent epimerase/dehydratase 3741916 5324421 Smed_3533 Sinorhizobium medicae WSM419 NAD-dependent epimerase/dehydratase YP_001329184.1 3741041 R 366394 CDS YP_001329185.1 150398718 5324422 complement(3741913..3743076) 1 NC_009636.1 PFAM: HEAT domain containing protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: sme:SMc00406 hypothetical 4FE-4S ferredoxins, iron-sulfur binding region signature protein; hypothetical protein 3743076 5324422 Smed_3534 Sinorhizobium medicae WSM419 hypothetical protein YP_001329185.1 3741913 R 366394 CDS YP_001329186.1 150398719 5324423 complement(3743087..3743779) 1 NC_009636.1 PFAM: Glutathione S-transferase domain; KEGG: sme:SMc00407 putative glutathione S-transferase protein; glutathione S-transferase domain-containing protein 3743779 5324423 Smed_3535 Sinorhizobium medicae WSM419 glutathione S-transferase domain-containing protein YP_001329186.1 3743087 R 366394 CDS YP_001329187.1 150398720 5324424 3743936..3744742 1 NC_009636.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 3744742 5324424 Smed_3536 Sinorhizobium medicae WSM419 undecaprenyl pyrophosphate phosphatase YP_001329187.1 3743936 D 366394 CDS YP_001329188.1 150398721 5324425 complement(3744854..3745015) 1 NC_009636.1 KEGG: sme:SMc00409 hypothetical signal peptide protein; putative signal peptide protein 3745015 5324425 Smed_3537 Sinorhizobium medicae WSM419 putative signal peptide protein YP_001329188.1 3744854 R 366394 CDS YP_001329189.1 150398722 5324426 complement(3745261..3746241) 1 NC_009636.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: sme:SMc00410 putative oxidoreductase protein; NADH dehydrogenase (ubiquinone) 3746241 5324426 Smed_3538 Sinorhizobium medicae WSM419 NADH dehydrogenase (ubiquinone) YP_001329189.1 3745261 R 366394 CDS YP_001329190.1 150398723 5324427 complement(3746362..3746649) 1 NC_009636.1 PFAM: protein of unknown function DUF1330; KEGG: sme:SMc00411 hypothetical protein; hypothetical protein 3746649 5324427 Smed_3539 Sinorhizobium medicae WSM419 hypothetical protein YP_001329190.1 3746362 R 366394 CDS YP_001329191.1 150398724 5324428 complement(3746754..3747452) 1 NC_009636.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3747452 5324428 Smed_3540 Sinorhizobium medicae WSM419 orotidine 5'-phosphate decarboxylase YP_001329191.1 3746754 R 366394 CDS YP_001329192.1 150398725 5324429 complement(3747460..3748059) 1 NC_009636.1 PFAM: Phosphoglycerate mutase; KEGG: sme:SMc00413 hypothetical protein; phosphoglycerate mutase 3748059 5324429 Smed_3541 Sinorhizobium medicae WSM419 phosphoglycerate mutase YP_001329192.1 3747460 R 366394 CDS YP_001329193.1 150398726 5324430 complement(3748056..3748658) 1 NC_009636.1 KEGG: sme:SMc00414 hypothetical protein; hypothetical protein 3748658 5324430 Smed_3542 Sinorhizobium medicae WSM419 hypothetical protein YP_001329193.1 3748056 R 366394 CDS YP_001329194.1 150398727 5324431 complement(3748860..3749978) 1 NC_009636.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3749978 5324431 Smed_3543 Sinorhizobium medicae WSM419 DNA polymerase III subunit beta YP_001329194.1 3748860 R 366394 CDS YP_001329195.1 150398728 5324432 3750240..3751202 1 NC_009636.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sme:SMc00416 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase 3751202 5324432 Smed_3544 Sinorhizobium medicae WSM419 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001329195.1 3750240 D 366394 CDS YP_001329196.1 150398729 5324433 3751192..3751560 1 NC_009636.1 PFAM: protein of unknown function UPF0102; KEGG: sme:SMc00418 predicted endonuclease; hypothetical protein 3751560 5324433 Smed_3545 Sinorhizobium medicae WSM419 hypothetical protein YP_001329196.1 3751192 D 366394 CDS YP_001329197.1 150398730 5324434 3751749..3752696 1 NC_009636.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3752696 5324434 Smed_3546 Sinorhizobium medicae WSM419 glutathione synthetase YP_001329197.1 3751749 D 366394 CDS YP_001329198.1 150398731 5324435 3752813..3754411 1 NC_009636.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sme:SMc00420 magnesium chelatase family protein; Mg chelatase subunit ChlI 3754411 5324435 Smed_3547 Sinorhizobium medicae WSM419 Mg chelatase subunit ChlI YP_001329198.1 3752813 D 366394 CDS YP_001329199.1 150398732 5324436 3754428..3754802 1 NC_009636.1 PFAM: SH3 domain protein; Variant SH3 domain protein; KEGG: bca:BCE_3400 SH3 domain protein; SH3 domain-containing protein 3754802 5324436 Smed_3548 Sinorhizobium medicae WSM419 SH3 domain-containing protein YP_001329199.1 3754428 D 366394 CDS YP_001329200.1 150398733 5324437 complement(3755212..3756180) 1 NC_009636.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sme:SMc00421 probable cysteine synthase A (O-acetylserine sulfhydrylase A) protein; cysteine synthase A 3756180 5324437 Smed_3549 Sinorhizobium medicae WSM419 cysteine synthase A YP_001329200.1 3755212 R 366394 CDS YP_001329201.1 150398734 5324439 3757096..3757728 1 NC_009636.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sme:SMc00423 putative amino acid efflux protein; lysine exporter protein LysE/YggA 3757728 5324439 Smed_3551 Sinorhizobium medicae WSM419 lysine exporter protein LysE/YggA YP_001329201.1 3757096 D 366394 CDS YP_001329202.1 150398735 5324440 complement(3757797..3758705) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00424 hypothetical protein; hypothetical protein 3758705 5324440 Smed_3552 Sinorhizobium medicae WSM419 hypothetical protein YP_001329202.1 3757797 R 366394 CDS YP_001329203.1 150398736 5324441 3758839..3759276 1 NC_009636.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sme:SMc00425 putative transcription regulator protein; AsnC family transcriptional regulator 3759276 5324441 Smed_3553 Sinorhizobium medicae WSM419 AsnC family transcriptional regulator YP_001329203.1 3758839 D 366394 CDS YP_001329204.1 150398737 5324442 complement(3759269..3759751) 1 NC_009636.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 3759751 dut 5324442 dut Sinorhizobium medicae WSM419 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001329204.1 3759269 R 366394 CDS YP_001329205.1 150398738 5324443 3759850..3761433 1 NC_009636.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sme:SMc00427 peptide chain release factor RF-3; peptide chain release factor 3 3761433 5324443 Smed_3555 Sinorhizobium medicae WSM419 peptide chain release factor 3 YP_001329205.1 3759850 D 366394 CDS YP_001329206.1 150398739 5324444 complement(3761452..3762315) 1 NC_009636.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sme:SMc00428 putative transmembrane protein; hypothetical protein 3762315 5324444 Smed_3556 Sinorhizobium medicae WSM419 hypothetical protein YP_001329206.1 3761452 R 366394 CDS YP_001329207.1 150398740 5324445 complement(3762428..3763237) 1 NC_009636.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00429 putative transcription regulator protein; AraC family transcriptional regulator 3763237 5324445 Smed_3557 Sinorhizobium medicae WSM419 AraC family transcriptional regulator YP_001329207.1 3762428 R 366394 CDS YP_001329208.1 150398741 5324446 complement(3763359..3763763) 1 NC_009636.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sme:SMc00431 hypothetical protein; glutathione-dependent formaldehyde-activating protein 3763763 5324446 Smed_3558 Sinorhizobium medicae WSM419 glutathione-dependent formaldehyde-activating protein YP_001329208.1 3763359 R 366394 CDS YP_001329209.1 150398742 5324447 complement(3764046..3764921) 1 NC_009636.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sme:SMc00432 putative myo-inositol catabolism protein; myo-inositol catabolism IolB domain-containing protein 3764921 5324447 Smed_3559 Sinorhizobium medicae WSM419 myo-inositol catabolism IolB domain-containing protein YP_001329209.1 3764046 R 366394 CDS YP_001329210.1 150398743 5324448 complement(3765010..3765912) 1 NC_009636.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sme:SMc00433 putative myo-inositoL catabolism protein; xylose isomerase domain-containing protein 3765912 5324448 Smed_3560 Sinorhizobium medicae WSM419 xylose isomerase domain-containing protein YP_001329210.1 3765010 R 366394 CDS YP_001329211.1 150398744 5324449 complement(3765994..3767862) 1 NC_009636.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sme:SMc01166 putative malonic semialdehyde oxidative decarboxylase protein; thiamine pyrophosphate protein central region 3767862 5324449 Smed_3561 Sinorhizobium medicae WSM419 thiamine pyrophosphate protein central region YP_001329211.1 3765994 R 366394 CDS YP_001329212.1 150398745 5324450 complement(3767908..3769875) 1 NC_009636.1 PFAM: PfkB domain protein; KEGG: sme:SMc01165 putative sugar kinase protein; ribokinase-like domain-containing protein 3769875 5324450 Smed_3562 Sinorhizobium medicae WSM419 ribokinase-like domain-containing protein YP_001329212.1 3767908 R 366394 CDS YP_001329213.1 150398746 5324451 complement(3769994..3770848) 1 NC_009636.1 PFAM: sugar isomerase (SIS); KEGG: sme:SMc01164 hypothetical protein; RpiR family transcriptional regulator 3770848 5324451 Smed_3563 Sinorhizobium medicae WSM419 RpiR family transcriptional regulator YP_001329213.1 3769994 R 366394 CDS YP_001329214.1 150398747 5324452 complement(3770980..3772110) 1 NC_009636.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sme:SMc01163 putative oxidoreductase protein; oxidoreductase domain-containing protein 3772110 5324452 Smed_3564 Sinorhizobium medicae WSM419 oxidoreductase domain-containing protein YP_001329214.1 3770980 R 366394 CDS YP_001329215.1 150398748 5324453 3772354..3773178 1 NC_009636.1 KEGG: sme:SMc01162 hypothetical protein; hypothetical protein 3773178 5324453 Smed_3565 Sinorhizobium medicae WSM419 hypothetical protein YP_001329215.1 3772354 D 366394 CDS YP_001329216.1 150398749 5324454 complement(3773197..3774420) 1 NC_009636.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3774420 5324454 Smed_3566 Sinorhizobium medicae WSM419 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001329216.1 3773197 R 366394 CDS YP_001329217.1 150398750 5324455 3774565..3775023 1 NC_009636.1 PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc01160 hypothetical protein; BadM/Rrf2 family transcriptional regulator 3775023 5324455 Smed_3567 Sinorhizobium medicae WSM419 BadM/Rrf2 family transcriptional regulator YP_001329217.1 3774565 D 366394 CDS YP_001329218.1 150398751 5324456 3775013..3775918 1 NC_009636.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc01159 putative oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3775918 5324456 Smed_3568 Sinorhizobium medicae WSM419 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001329218.1 3775013 D 366394 CDS YP_001329219.1 150398752 5324457 complement(3775971..3776654) 1 NC_009636.1 PFAM: Ankyrin; KEGG: sme:SMc01158 hypothetical protein; ankyrin 3776654 5324457 Smed_3569 Sinorhizobium medicae WSM419 ankyrin YP_001329219.1 3775971 R 366394 CDS YP_001329220.1 150398753 5324458 complement(3776678..3777457) 1 NC_009636.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMc01157 3-oxoacyl-[acyl-carrier protein] reductase; short-chain dehydrogenase/reductase SDR 3777457 5324458 Smed_3570 Sinorhizobium medicae WSM419 short-chain dehydrogenase/reductase SDR YP_001329220.1 3776678 R 366394 CDS YP_001329221.1 150398754 5324459 complement(3777541..3779115) 1 NC_009636.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: sme:SMc01156 probable ubiquinone biosynthesis protein; 2-polyprenylphenol 6-hydroxylase 3779115 5324459 Smed_3571 Sinorhizobium medicae WSM419 2-polyprenylphenol 6-hydroxylase YP_001329221.1 3777541 R 366394 CDS YP_001329222.1 150398755 5324460 complement(3779120..3779896) 1 NC_009636.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 3779896 ubiE 5324460 ubiE Sinorhizobium medicae WSM419 ubiquinone/menaquinone biosynthesis methyltransferase YP_001329222.1 3779120 R 366394 CDS YP_001329223.1 150398756 5324461 3780080..3781000 1 NC_009636.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 3781000 5324461 Smed_3573 Sinorhizobium medicae WSM419 formamidopyrimidine-DNA glycosylase YP_001329223.1 3780080 D 366394 CDS YP_001329224.1 150398757 5324462 3781073..3781846 1 NC_009636.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3781846 5324462 Smed_3574 Sinorhizobium medicae WSM419 enoyl-CoA hydratase YP_001329224.1 3781073 D 366394 CDS